locus-tag class description KM404_RS00005 PF00308 Bacterial dnaA protein KM404_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix KM404_RS00005 PF11638 DnaA N-terminal domain KM404_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM404_RS00010 PF02767 DNA polymerase III beta subunit, central domain KM404_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM404_RS00020 PF02463 RecF/RecN/SMC N terminal domain KM404_RS00025 PF01751 Toprim domain KM404_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM404_RS00025 PF00204 DNA gyrase B KM404_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM404_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM404_RS00065 PF00571 CBS domain KM404_RS00065 PF00478 IMP dehydrogenase / GMP reductase domain KM404_RS00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM404_RS00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM404_RS00075 PF01680 SOR/SNZ family KM404_RS00080 PF01174 SNO glutamine amidotransferase family KM404_RS00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM404_RS00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM404_RS00100 PF01712 Deoxynucleoside kinase KM404_RS00105 PF01712 Deoxynucleoside kinase KM404_RS00110 PF00857 Isochorismatase family KM404_RS00115 PF14437 MafB19-like deaminase KM404_RS00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM404_RS00130 PF02575 YbaB/EbfC DNA-binding family KM404_RS00135 PF02132 RecR protein KM404_RS00135 PF13662 Toprim domain KM404_RS00140 PF10704 Protein of unknown function (DUF2508) KM404_RS00145 PF07441 SigmaK-factor processing regulatory protein BofA KM404_RS00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM404_RS00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM404_RS00185 PF02223 Thymidylate kinase KM404_RS00190 PF09115 DNA polymerase III, delta subunit, C terminal KM404_RS00195 PF04468 PSP1 C-terminal conserved region KM404_RS00200 PF06156 Initiation control protein YabA KM404_RS00205 PF05175 Methyltransferase small domain KM404_RS00210 PF01541 GIY-YIG catalytic domain KM404_RS00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM404_RS00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM404_RS00220 PF18277 AbrB C-terminal domain KM404_RS00225 PF08264 Anticodon-binding domain of tRNA KM404_RS00225 PF09334 tRNA synthetases class I (M) KM404_RS00225 PF01588 Putative tRNA binding domain KM404_RS00230 PF01026 TatD related DNase KM404_RS00235 PF13662 Toprim domain KM404_RS00235 PF13331 Domain of unknown function (DUF4093) KM404_RS00240 PF00398 Ribosomal RNA adenine dimethylase KM404_RS00245 PF05582 YabG peptidase U57 KM404_RS00250 PF06257 Biofilm formation stimulator VEG KM404_RS00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM404_RS00260 PF00288 GHMP kinases N terminal domain KM404_RS00260 PF08544 GHMP kinases C terminal KM404_RS00265 PF09182 Bacterial purine repressor, N-terminal KM404_RS00265 PF00156 Phosphoribosyl transferase domain KM404_RS00270 PF01042 Endoribonuclease L-PSP KM404_RS00275 PF04026 SpoVG KM404_RS00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM404_RS00280 PF00483 Nucleotidyl transferase KM404_RS00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM404_RS00285 PF14572 Phosphoribosyl synthetase-associated domain KM404_RS00290 PF01195 Peptidyl-tRNA hydrolase KM404_RS00300 PF02559 CarD-like/TRCF domain KM404_RS00300 PF03461 TRCF domain KM404_RS00300 PF17757 UvrB interaction domain KM404_RS00300 PF00270 DEAD/DEAH box helicase KM404_RS00300 PF00271 Helicase conserved C-terminal domain KM404_RS00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM404_RS00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM404_RS00310 PF01943 Polysaccharide biosynthesis protein KM404_RS00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM404_RS00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM404_RS00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM404_RS00320 PF01479 S4 domain KM404_RS00325 PF07873 YabP family KM404_RS00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM404_RS00340 PF00575 S1 RNA binding domain KM404_RS00355 PF07228 Stage II sporulation protein E (SpoIIE) KM404_RS00360 PF01171 PP-loop family KM404_RS00360 PF09179 TilS substrate binding domain KM404_RS00360 PF11734 TilS substrate C-terminal domain KM404_RS00365 PF00156 Phosphoribosyl transferase domain KM404_RS00370 PF17862 AAA+ lid domain KM404_RS00370 PF06480 FtsH Extracellular KM404_RS00370 PF01434 Peptidase family M41 KM404_RS00370 PF00004 ATPase family associated with various cellular activities (AAA) KM404_RS00375 PF03309 Type III pantothenate kinase KM404_RS00380 PF01430 Hsp33 protein KM404_RS00385 PF00291 Pyridoxal-phosphate dependent enzyme KM404_RS00390 PF00425 chorismate binding enzyme KM404_RS00390 PF04715 Anthranilate synthase component I, N terminal region KM404_RS00395 PF00117 Glutamine amidotransferase class-I KM404_RS00400 PF01063 Amino-transferase class IV KM404_RS00405 PF00809 Pterin binding enzyme KM404_RS00410 PF02152 Dihydroneopterin aldolase KM404_RS00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM404_RS00420 PF01381 Helix-turn-helix KM404_RS00425 PF01207 Dihydrouridine synthase (Dus) KM404_RS00430 PF01336 OB-fold nucleic acid binding domain KM404_RS00430 PF00152 tRNA synthetases class II (D, K and N) KM404_RS00450 PF17727 CtsR C-terminal dimerization domain KM404_RS00450 PF05848 CtsR N-terminal HTH domain KM404_RS00455 PF02151 UvrB/uvrC motif KM404_RS00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM404_RS00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM404_RS00465 PF17871 AAA lid domain KM404_RS00465 PF07724 AAA domain (Cdc48 subfamily) KM404_RS00465 PF00004 ATPase family associated with various cellular activities (AAA) KM404_RS00465 PF02861 Clp amino terminal domain, pathogenicity island component KM404_RS00470 PF18073 Rubredoxin metal binding domain KM404_RS00475 PF10635 DisA bacterial checkpoint controller linker region KM404_RS00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM404_RS00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM404_RS00490 PF02542 YgbB family KM404_RS00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM404_RS00500 PF06426 Serine acetyltransferase, N-terminal KM404_RS00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM404_RS00505 PF09190 DALR domain KM404_RS00505 PF01406 tRNA synthetases class I (C) catalytic domain KM404_RS00510 PF00636 Ribonuclease III domain KM404_RS00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM404_RS00515 PF00588 SpoU rRNA Methylase family KM404_RS00520 PF05991 YacP-like NYN domain KM404_RS00525 PF08281 Sigma-70, region 4 KM404_RS00525 PF04542 Sigma-70 region 2 KM404_RS00530 PF00471 Ribosomal protein L33 KM404_RS00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM404_RS00540 PF00467 KOW motif KM404_RS00540 PF02357 Transcription termination factor nusG KM404_RS00545 PF00298 Ribosomal protein L11, RNA binding domain KM404_RS00545 PF03946 Ribosomal protein L11, N-terminal domain KM404_RS00550 PF00687 Ribosomal protein L1p/L10e family KM404_RS00555 PF00466 Ribosomal protein L10 KM404_RS00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM404_RS00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM404_RS00565 PF05175 Methyltransferase small domain KM404_RS00570 PF04560 RNA polymerase Rpb2, domain 7 KM404_RS00570 PF00562 RNA polymerase Rpb2, domain 6 KM404_RS00570 PF10385 RNA polymerase beta subunit external 1 domain KM404_RS00570 PF04565 RNA polymerase Rpb2, domain 3 KM404_RS00570 PF04563 RNA polymerase beta subunit KM404_RS00570 PF04561 RNA polymerase Rpb2, domain 2 KM404_RS00575 PF04998 RNA polymerase Rpb1, domain 5 KM404_RS00575 PF05000 RNA polymerase Rpb1, domain 4 KM404_RS00575 PF04983 RNA polymerase Rpb1, domain 3 KM404_RS00575 PF00623 RNA polymerase Rpb1, domain 2 KM404_RS00575 PF04997 RNA polymerase Rpb1, domain 1 KM404_RS00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM404_RS00585 PF00164 Ribosomal protein S12/S23 KM404_RS00590 PF00177 Ribosomal protein S7p/S5e KM404_RS00595 PF03764 Elongation factor G, domain IV KM404_RS00595 PF00679 Elongation factor G C-terminus KM404_RS00595 PF14492 Elongation Factor G, domain II KM404_RS00595 PF03144 Elongation factor Tu domain 2 KM404_RS00595 PF00009 Elongation factor Tu GTP binding domain KM404_RS00600 PF00009 Elongation factor Tu GTP binding domain KM404_RS00600 PF03143 Elongation factor Tu C-terminal domain KM404_RS00600 PF03144 Elongation factor Tu domain 2 KM404_RS00605 PF00338 Ribosomal protein S10p/S20e KM404_RS00610 PF00297 Ribosomal protein L3 KM404_RS00615 PF00573 Ribosomal protein L4/L1 family KM404_RS00620 PF00276 Ribosomal protein L23 KM404_RS00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM404_RS00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM404_RS00630 PF00203 Ribosomal protein S19 KM404_RS00635 PF00237 Ribosomal protein L22p/L17e KM404_RS00640 PF00189 Ribosomal protein S3, C-terminal domain KM404_RS00640 PF07650 KH domain KM404_RS00645 PF00252 Ribosomal protein L16p/L10e KM404_RS00650 PF00831 Ribosomal L29 protein KM404_RS00655 PF00366 Ribosomal protein S17 KM404_RS00660 PF00238 Ribosomal protein L14p/L23e KM404_RS00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM404_RS00665 PF00467 KOW motif KM404_RS00670 PF00673 ribosomal L5P family C-terminus KM404_RS00670 PF00281 Ribosomal protein L5 KM404_RS00675 PF00253 Ribosomal protein S14p/S29e KM404_RS00680 PF00410 Ribosomal protein S8 KM404_RS00685 PF00347 Ribosomal protein L6 KM404_RS00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM404_RS00695 PF03719 Ribosomal protein S5, C-terminal domain KM404_RS00695 PF00333 Ribosomal protein S5, N-terminal domain KM404_RS00700 PF00327 Ribosomal protein L30p/L7e KM404_RS00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM404_RS00710 PF00344 SecY translocase KM404_RS00715 PF05191 Adenylate kinase, active site lid KM404_RS00720 PF00557 Metallopeptidase family M24 KM404_RS00725 PF01176 Translation initiation factor 1A / IF-1 KM404_RS00730 PF00444 Ribosomal protein L36 KM404_RS00735 PF00416 Ribosomal protein S13/S18 KM404_RS00740 PF00411 Ribosomal protein S11 KM404_RS00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM404_RS00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM404_RS00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM404_RS00750 PF01196 Ribosomal protein L17 KM404_RS00755 PF00005 ABC transporter KM404_RS00760 PF00005 ABC transporter KM404_RS00765 PF02361 Cobalt transport protein KM404_RS00770 PF01416 tRNA pseudouridine synthase KM404_RS00775 PF00572 Ribosomal protein L13 KM404_RS00780 PF00380 Ribosomal protein S9/S16 KM404_RS00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM404_RS00795 PF10609 NUBPL iron-transfer P-loop NTPase KM404_RS00800 PF17898 Spore germination GerD central core domain KM404_RS00805 PF14089 KinB-signalling pathway activation in sporulation KM404_RS00810 PF01522 Polysaccharide deacetylase KM404_RS00885 PF00491 Arginase family KM404_RS00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM404_RS00895 PF07949 YbbR-like protein KM404_RS00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM404_RS00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM404_RS00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM404_RS00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM404_RS00910 PF01380 SIS domain KM404_RS00915 PF00561 alpha/beta hydrolase fold KM404_RS00920 PF00392 Bacterial regulatory proteins, gntR family KM404_RS00920 PF07729 FCD domain KM404_RS00930 PF02447 GntP family permease KM404_RS00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM404_RS00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM404_RS00940 PF00326 Prolyl oligopeptidase family KM404_RS00940 PF07676 WD40-like Beta Propeller Repeat KM404_RS00975 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS00980 PF09383 NIL domain KM404_RS00980 PF00005 ABC transporter KM404_RS00985 PF03180 NLPA lipoprotein KM404_RS00990 PF00107 Zinc-binding dehydrogenase KM404_RS00990 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS01000 PF01565 FAD binding domain KM404_RS01005 PF07690 Major Facilitator Superfamily KM404_RS01015 PF07690 Major Facilitator Superfamily KM404_RS01030 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS01035 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM404_RS01040 PF00005 ABC transporter KM404_RS01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS01045 PF00005 ABC transporter KM404_RS01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS01060 PF12833 Helix-turn-helix domain KM404_RS01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS01085 PF00248 Aldo/keto reductase family KM404_RS01095 PF04973 Nicotinamide mononucleotide transporter KM404_RS01100 PF06800 Sugar transport protein KM404_RS01105 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS01115 PF12728 Helix-turn-helix domain KM404_RS01115 PF12727 PBP superfamily domain KM404_RS01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS01125 PF03466 LysR substrate binding domain KM404_RS01130 PF00892 EamA-like transporter family KM404_RS01135 PF14142 YrzO-like protein KM404_RS01145 PF01553 Acyltransferase KM404_RS01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM404_RS01155 PF00356 Bacterial regulatory proteins, lacI family KM404_RS01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM404_RS01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS01175 PF01026 TatD related DNase KM404_RS01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM404_RS01205 PF00005 ABC transporter KM404_RS01205 PF16326 ABC transporter C-terminal domain KM404_RS01205 PF12848 ABC transporter KM404_RS01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS01225 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM404_RS01230 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS01235 PF00005 ABC transporter KM404_RS01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS01240 PF00005 ABC transporter KM404_RS01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS01280 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM404_RS01290 PF07690 Major Facilitator Superfamily KM404_RS01300 PF01225 Mur ligase family, catalytic domain KM404_RS01300 PF02875 Mur ligase family, glutamate ligase domain KM404_RS01300 PF08245 Mur ligase middle domain KM404_RS01305 PF00270 DEAD/DEAH box helicase KM404_RS01305 PF00271 Helicase conserved C-terminal domain KM404_RS01310 PF03851 UV-endonuclease UvdE KM404_RS01315 PF01694 Rhomboid family KM404_RS01320 PF01648 4'-phosphopantetheinyl transferase superfamily KM404_RS01330 PF01168 Alanine racemase, N-terminal domain KM404_RS01330 PF00842 Alanine racemase, C-terminal domain KM404_RS01335 PF01402 Ribbon-helix-helix protein, copG family KM404_RS01340 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM404_RS01345 PF00575 S1 RNA binding domain KM404_RS01345 PF16921 Tex protein YqgF-like domain KM404_RS01345 PF09371 Tex-like protein N-terminal domain KM404_RS01345 PF17674 HHH domain KM404_RS01355 PF17283 SprT-like zinc ribbon domain KM404_RS01355 PF10263 SprT-like family KM404_RS01440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM404_RS01445 PF00814 Glycoprotease family KM404_RS01450 PF00583 Acetyltransferase (GNAT) family KM404_RS01455 PF00814 Glycoprotease family KM404_RS01460 PF16326 ABC transporter C-terminal domain KM404_RS01460 PF00005 ABC transporter KM404_RS01460 PF12848 ABC transporter KM404_RS01465 PF06971 Putative DNA-binding protein N-terminus KM404_RS01465 PF02629 CoA binding domain KM404_RS01475 PF02517 CPBP intramembrane metalloprotease KM404_RS01480 PF00166 Chaperonin 10 Kd subunit KM404_RS01485 PF00118 TCP-1/cpn60 chaperonin family KM404_RS01490 PF02540 NAD synthase KM404_RS01490 PF00958 GMP synthase C terminal domain KM404_RS01490 PF00117 Glutamine amidotransferase class-I KM404_RS01495 PF00860 Permease family KM404_RS01500 PF00486 Transcriptional regulatory protein, C terminal KM404_RS01500 PF00072 Response regulator receiver domain KM404_RS01505 PF16736 Single Cache-like KM404_RS01505 PF00989 PAS fold KM404_RS01505 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS01535 PF08241 Methyltransferase domain KM404_RS01580 PF02673 Bacitracin resistance protein BacA KM404_RS01590 PF00005 ABC transporter KM404_RS01595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS01595 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS01600 PF00072 Response regulator receiver domain KM404_RS01600 PF00486 Transcriptional regulatory protein, C terminal KM404_RS01625 PF00731 AIR carboxylase KM404_RS01630 PF02222 ATP-grasp domain KM404_RS01630 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM404_RS01635 PF10397 Adenylosuccinate lyase C-terminus KM404_RS01635 PF00206 Lyase KM404_RS01640 PF01259 SAICAR synthetase KM404_RS01645 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM404_RS01655 PF02769 AIR synthase related protein, C-terminal domain KM404_RS01655 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM404_RS01655 PF00586 AIR synthase related protein, N-terminal domain KM404_RS01660 PF00156 Phosphoribosyl transferase domain KM404_RS01665 PF02769 AIR synthase related protein, C-terminal domain KM404_RS01665 PF00586 AIR synthase related protein, N-terminal domain KM404_RS01670 PF00551 Formyl transferase KM404_RS01675 PF01808 AICARFT/IMPCHase bienzyme KM404_RS01675 PF02142 MGS-like domain KM404_RS01680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM404_RS01680 PF02843 Phosphoribosylglycinamide synthetase, C domain KM404_RS01680 PF02844 Phosphoribosylglycinamide synthetase, N domain KM404_RS01700 PF01884 PcrB family KM404_RS01705 PF00580 UvrD/REP helicase N-terminal domain KM404_RS01705 PF13361 UvrD-like helicase C-terminal domain KM404_RS01710 PF00533 BRCA1 C Terminus (BRCT) domain KM404_RS01710 PF01653 NAD-dependent DNA ligase adenylation domain KM404_RS01710 PF03120 NAD-dependent DNA ligase OB-fold domain KM404_RS01710 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM404_RS01710 PF12826 Helix-hairpin-helix motif KM404_RS01715 PF07537 CamS sex pheromone cAM373 precursor KM404_RS01720 PF01925 Sulfite exporter TauE/SafE KM404_RS01725 PF00171 Aldehyde dehydrogenase family KM404_RS01735 PF00857 Isochorismatase family KM404_RS01740 PF09383 NIL domain KM404_RS01740 PF00005 ABC transporter KM404_RS01745 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS01750 PF03180 NLPA lipoprotein KM404_RS01775 PF01047 MarR family KM404_RS01785 PF02686 Glu-tRNAGln amidotransferase C subunit KM404_RS01790 PF01425 Amidase KM404_RS01795 PF02934 GatB/GatE catalytic domain KM404_RS01795 PF02637 GatB domain KM404_RS01800 PF00781 Diacylglycerol kinase catalytic domain KM404_RS01805 PF13419 Haloacid dehalogenase-like hydrolase KM404_RS01810 PF00202 Aminotransferase class-III KM404_RS01815 PF00158 Sigma-54 interaction domain KM404_RS01820 PF00171 Aldehyde dehydrogenase family KM404_RS01825 PF00893 Small Multidrug Resistance protein KM404_RS01830 PF02073 Thermophilic metalloprotease (M29) KM404_RS01845 PF07670 Nucleoside recognition KM404_RS01845 PF07662 Na+ dependent nucleoside transporter C-terminus KM404_RS01845 PF01773 Na+ dependent nucleoside transporter N-terminus KM404_RS01850 PF02475 Met-10+ like-protein KM404_RS01850 PF01938 TRAM domain KM404_RS01850 PF05958 tRNA (Uracil-5-)-methyltransferase KM404_RS01855 PF01207 Dihydrouridine synthase (Dus) KM404_RS01865 PF07308 Protein of unknown function (DUF1456) KM404_RS01880 PF13378 Enolase C-terminal domain-like KM404_RS01880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM404_RS01890 PF03553 Na+/H+ antiporter family KM404_RS01895 PF01546 Peptidase family M20/M25/M40 KM404_RS01895 PF07687 Peptidase dimerisation domain KM404_RS01905 PF13192 Thioredoxin domain KM404_RS01905 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS01910 PF00578 AhpC/TSA family KM404_RS01915 PF01636 Phosphotransferase enzyme family KM404_RS01920 PF01008 Initiation factor 2 subunit family KM404_RS01925 PF00596 Class II Aldolase and Adducin N-terminal domain KM404_RS01930 PF01032 FecCD transport family KM404_RS01935 PF01032 FecCD transport family KM404_RS01940 PF01497 Periplasmic binding protein KM404_RS01945 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS01955 PF12728 Helix-turn-helix domain KM404_RS01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS01990 PF13426 PAS domain KM404_RS01990 PF13188 PAS domain KM404_RS01990 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS01990 PF00989 PAS fold KM404_RS02010 PF10127 RNA repair pathway DNA polymerase beta family KM404_RS02015 PF07690 Major Facilitator Superfamily KM404_RS02020 PF01266 FAD dependent oxidoreductase KM404_RS02020 PF00355 Rieske [2Fe-2S] domain KM404_RS02030 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS02035 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM404_RS02040 PF00005 ABC transporter KM404_RS02045 PF12729 Four helix bundle sensory module for signal transduction KM404_RS02045 PF00672 HAMP domain KM404_RS02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS02050 PF12729 Four helix bundle sensory module for signal transduction KM404_RS02050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS02050 PF00672 HAMP domain KM404_RS02055 PF00128 Alpha amylase, catalytic domain KM404_RS02055 PF16657 Maltogenic Amylase, C-terminal domain KM404_RS02060 PF02378 Phosphotransferase system, EIIC KM404_RS02060 PF00367 phosphotransferase system, EIIB KM404_RS02060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM404_RS02065 PF03372 Endonuclease/Exonuclease/phosphatase family KM404_RS02070 PF01061 ABC-2 type transporter KM404_RS02075 PF01751 Toprim domain KM404_RS02075 PF01131 DNA topoisomerase KM404_RS02080 PF02110 Hydroxyethylthiazole kinase family KM404_RS02085 PF02581 Thiamine monophosphate synthase KM404_RS02090 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM404_RS02095 PF00672 HAMP domain KM404_RS02095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS02100 PF01910 Thiamine-binding protein KM404_RS02105 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS02115 PF00005 ABC transporter KM404_RS02120 PF12848 ABC transporter KM404_RS02120 PF00005 ABC transporter KM404_RS02125 PF00041 Fibronectin type III domain KM404_RS02125 PF00704 Glycosyl hydrolases family 18 KM404_RS02145 PF08360 QacR-like protein, C-terminal region KM404_RS02145 PF00440 Bacterial regulatory proteins, tetR family KM404_RS02165 PF11700 Vacuole effluxer Atg22 like KM404_RS02180 PF03129 Anticodon binding domain KM404_RS02180 PF09180 Prolyl-tRNA synthetase, C-terminal KM404_RS02180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM404_RS02190 PF00480 ROK family KM404_RS02195 PF02342 TerD domain KM404_RS02200 PF02342 TerD domain KM404_RS02205 PF02342 TerD domain KM404_RS02210 PF03741 Integral membrane protein TerC family KM404_RS02215 PF14266 Putative component of 'biosynthetic module' KM404_RS02220 PF05816 Toxic anion resistance protein (TelA) KM404_RS02225 PF00690 Cation transporter/ATPase, N-terminus KM404_RS02225 PF00689 Cation transporting ATPase, C-terminus KM404_RS02230 PF06569 Protein of unknown function (DUF1128) KM404_RS02235 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM404_RS02245 PF03631 Virulence factor BrkB KM404_RS02255 PF00892 EamA-like transporter family KM404_RS02275 PF09335 SNARE associated Golgi protein KM404_RS02290 PF16242 Pyridoxamine 5'-phosphate oxidase like KM404_RS02295 PF01699 Sodium/calcium exchanger protein KM404_RS02300 PF14167 YfkD-like protein KM404_RS02305 PF08756 YfkB-like domain KM404_RS02305 PF04055 Radical SAM superfamily KM404_RS02315 PF05683 Fumarase C-terminus KM404_RS02315 PF05681 Fumarate hydratase (Fumerase) KM404_RS02320 PF01522 Polysaccharide deacetylase KM404_RS02330 PF05958 tRNA (Uracil-5-)-methyltransferase KM404_RS02330 PF01938 TRAM domain KM404_RS02335 PF00589 Phage integrase family KM404_RS02335 PF14659 Phage integrase, N-terminal SAM-like domain KM404_RS02345 PF01381 Helix-turn-helix KM404_RS02360 PF01381 Helix-turn-helix KM404_RS02395 PF07319 Primosomal protein DnaI N-terminus KM404_RS02395 PF01695 IstB-like ATP binding protein KM404_RS02620 PF01183 Glycosyl hydrolases family 25 KM404_RS02630 PF01416 tRNA pseudouridine synthase KM404_RS02640 PF02954 Bacterial regulatory protein, Fis family KM404_RS02640 PF13426 PAS domain KM404_RS02640 PF00158 Sigma-54 interaction domain KM404_RS02650 PF00324 Amino acid permease KM404_RS02655 PF01546 Peptidase family M20/M25/M40 KM404_RS02655 PF07687 Peptidase dimerisation domain KM404_RS02680 PF04960 Glutaminase KM404_RS02685 PF02378 Phosphotransferase system, EIIC KM404_RS02685 PF00367 phosphotransferase system, EIIB KM404_RS02690 PF00144 Beta-lactamase KM404_RS02705 PF00535 Glycosyl transferase family 2 KM404_RS02715 PF00551 Formyl transferase KM404_RS02715 PF02911 Formyl transferase, C-terminal domain KM404_RS02715 PF01370 NAD dependent epimerase/dehydratase family KM404_RS02720 PF00535 Glycosyl transferase family 2 KM404_RS02725 PF01228 Glycine radical KM404_RS02725 PF02901 Pyruvate formate lyase-like KM404_RS02730 PF04055 Radical SAM superfamily KM404_RS02735 PF04101 Glycosyltransferase family 28 C-terminal domain KM404_RS02735 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM404_RS02750 PF01979 Amidohydrolase family KM404_RS02755 PF08338 Domain of unknown function (DUF1731) KM404_RS02755 PF01370 NAD dependent epimerase/dehydratase family KM404_RS02760 PF02631 RecX family KM404_RS02775 PF08176 Small acid-soluble spore protein K family KM404_RS02780 PF14043 WVELL protein KM404_RS02785 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM404_RS02790 PF00730 HhH-GPD superfamily base excision DNA repair protein KM404_RS02790 PF14815 NUDIX domain KM404_RS02800 PF04259 Small, acid-soluble spore protein, gamma-type KM404_RS02805 PF14182 YgaB-like protein KM404_RS02810 PF04167 Protein of unknown function (DUF402) KM404_RS02815 PF00005 ABC transporter KM404_RS02815 PF00664 ABC transporter transmembrane region KM404_RS02820 PF06081 Aromatic acid exporter family member 1 KM404_RS02825 PF01493 GXGXG motif KM404_RS02825 PF01645 Conserved region in glutamate synthase KM404_RS02825 PF04898 Glutamate synthase central domain KM404_RS02825 PF00310 Glutamine amidotransferases class-II KM404_RS02830 PF00202 Aminotransferase class-III KM404_RS02835 PF00005 ABC transporter KM404_RS02850 PF07885 Ion channel KM404_RS02855 PF00578 AhpC/TSA family KM404_RS02860 PF01475 Ferric uptake regulator family KM404_RS02865 PF11023 Zinc-ribbon containing domain KM404_RS02965 PF01709 Transcriptional regulator KM404_RS02970 PF13344 Haloacid dehalogenase-like hydrolase KM404_RS02970 PF00293 NUDIX domain KM404_RS02975 PF00912 Transglycosylase KM404_RS02975 PF00905 Penicillin binding protein transpeptidase domain KM404_RS02980 PF13462 Thioredoxin KM404_RS02990 PF08331 Domain of unknown function (DUF1730) KM404_RS02995 PF12671 Putative amidase domain KM404_RS03000 PF00588 SpoU rRNA Methylase family KM404_RS03005 PF00563 EAL domain KM404_RS03005 PF00990 Diguanylate cyclase, GGDEF domain KM404_RS03005 PF03707 Bacterial signalling protein N terminal repeat KM404_RS03010 PF08298 PrkA AAA domain KM404_RS03010 PF06798 PrkA serine protein kinase C-terminal domain KM404_RS03015 PF04285 Protein of unknown function (DUF444) KM404_RS03030 PF02028 BCCT, betaine/carnitine/choline family transporter KM404_RS03035 PF18496 Collagenase G catalytic helper subdomain KM404_RS03035 PF08453 Peptidase family M9 N-terminal KM404_RS03035 PF01752 Collagenase KM404_RS03045 PF01145 SPFH domain / Band 7 family KM404_RS03045 PF15975 Flotillin KM404_RS03050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS03050 PF02743 Cache domain KM404_RS03050 PF00672 HAMP domain KM404_RS03055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS03055 PF00989 PAS fold KM404_RS03055 PF17203 Single cache domain 3 KM404_RS03055 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM404_RS03060 PF08279 HTH domain KM404_RS03060 PF12431 Transcriptional regulator KM404_RS03060 PF00072 Response regulator receiver domain KM404_RS03065 PF03600 Citrate transporter KM404_RS03085 PF04309 Glycerol-3-phosphate responsive antiterminator KM404_RS03090 PF17912 MalK OB fold domain KM404_RS03090 PF00005 ABC transporter KM404_RS03095 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS03100 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS03105 PF13416 Bacterial extracellular solute-binding protein KM404_RS03110 PF00149 Calcineurin-like phosphoesterase KM404_RS03115 PF00072 Response regulator receiver domain KM404_RS03115 PF00486 Transcriptional regulatory protein, C terminal KM404_RS03120 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS03130 PF13529 Peptidase_C39 like family KM404_RS03135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS03135 PF02743 Cache domain KM404_RS03135 PF00672 HAMP domain KM404_RS03140 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM404_RS03140 PF17203 Single cache domain 3 KM404_RS03140 PF00989 PAS fold KM404_RS03140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS03145 PF00072 Response regulator receiver domain KM404_RS03150 PF03390 2-hydroxycarboxylate transporter family KM404_RS03155 PF00390 Malic enzyme, N-terminal domain KM404_RS03155 PF03949 Malic enzyme, NAD binding domain KM404_RS03165 PF00892 EamA-like transporter family KM404_RS03170 PF00392 Bacterial regulatory proteins, gntR family KM404_RS03170 PF00155 Aminotransferase class I and II KM404_RS03180 PF00989 PAS fold KM404_RS03180 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS03180 PF18698 Histidine kinase sensor domain KM404_RS03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS03180 PF00672 HAMP domain KM404_RS03185 PF00486 Transcriptional regulatory protein, C terminal KM404_RS03185 PF00072 Response regulator receiver domain KM404_RS03190 PF00583 Acetyltransferase (GNAT) family KM404_RS03190 PF13508 Acetyltransferase (GNAT) domain KM404_RS03195 PF02634 FdhD/NarQ family KM404_RS03200 PF00037 4Fe-4S binding domain KM404_RS03200 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM404_RS03200 PF00384 Molybdopterin oxidoreductase KM404_RS03200 PF01568 Molydopterin dinucleotide binding domain KM404_RS03200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM404_RS03215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM404_RS03215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM404_RS03220 PF13520 Amino acid permease KM404_RS03225 PF01022 Bacterial regulatory protein, arsR family KM404_RS03230 PF00403 Heavy-metal-associated domain KM404_RS03235 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM404_RS03235 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM404_RS03235 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM404_RS03250 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM404_RS03250 PF01447 Thermolysin metallopeptidase, catalytic domain KM404_RS03250 PF03413 Peptidase propeptide and YPEB domain KM404_RS03250 PF07504 Fungalysin/Thermolysin Propeptide Motif KM404_RS03270 PF04294 VanW like protein KM404_RS03275 PF03816 Cell envelope-related transcriptional attenuator domain KM404_RS03280 PF01773 Na+ dependent nucleoside transporter N-terminus KM404_RS03280 PF07662 Na+ dependent nucleoside transporter C-terminus KM404_RS03285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS03295 PF10415 Fumarase C C-terminus KM404_RS03295 PF00206 Lyase KM404_RS03300 PF02652 L-lactate permease KM404_RS03305 PF01022 Bacterial regulatory protein, arsR family KM404_RS03310 PF08141 Small acid-soluble spore protein H family KM404_RS03315 PF00854 POT family KM404_RS03320 PF01497 Periplasmic binding protein KM404_RS03325 PF01032 FecCD transport family KM404_RS03330 PF01032 FecCD transport family KM404_RS03335 PF00005 ABC transporter KM404_RS03340 PF08241 Methyltransferase domain KM404_RS03345 PF00155 Aminotransferase class I and II KM404_RS03355 PF13344 Haloacid dehalogenase-like hydrolase KM404_RS03355 PF00293 NUDIX domain KM404_RS03360 PF00092 von Willebrand factor type A domain KM404_RS03365 PF07728 AAA domain (dynein-related subfamily) KM404_RS03370 PF13396 Phospholipase_D-nuclease N-terminal KM404_RS03370 PF13091 PLD-like domain KM404_RS03385 PF00563 EAL domain KM404_RS03385 PF00990 Diguanylate cyclase, GGDEF domain KM404_RS03385 PF03707 Bacterial signalling protein N terminal repeat KM404_RS03390 PF13520 Amino acid permease KM404_RS03395 PF00392 Bacterial regulatory proteins, gntR family KM404_RS03395 PF07702 UTRA domain KM404_RS03400 PF00367 phosphotransferase system, EIIB KM404_RS03400 PF02378 Phosphotransferase system, EIIC KM404_RS03405 PF16657 Maltogenic Amylase, C-terminal domain KM404_RS03405 PF00128 Alpha amylase, catalytic domain KM404_RS03420 PF03323 Bacillus/Clostridium GerA spore germination protein KM404_RS03430 PF01636 Phosphotransferase enzyme family KM404_RS03435 PF01235 Sodium:alanine symporter family KM404_RS03440 PF00005 ABC transporter KM404_RS03445 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM404_RS03450 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS03455 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS03460 PF00324 Amino acid permease KM404_RS03485 PF08279 HTH domain KM404_RS03485 PF13280 WYL domain KM404_RS03490 PF01872 RibD C-terminal domain KM404_RS03495 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS03495 PF18698 Histidine kinase sensor domain KM404_RS03495 PF00989 PAS fold KM404_RS03495 PF00672 HAMP domain KM404_RS03500 PF00486 Transcriptional regulatory protein, C terminal KM404_RS03500 PF00072 Response regulator receiver domain KM404_RS03510 PF00916 Sulfate permease family KM404_RS03510 PF01740 STAS domain KM404_RS03515 PF00582 Universal stress protein family KM404_RS03525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS03530 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS03535 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS03540 PF00005 ABC transporter KM404_RS03540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS03545 PF00005 ABC transporter KM404_RS03545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS03550 PF07690 Major Facilitator Superfamily KM404_RS03555 PF01047 MarR family KM404_RS03565 PF00356 Bacterial regulatory proteins, lacI family KM404_RS03570 PF00294 pfkB family carbohydrate kinase KM404_RS03575 PF05025 RbsD / FucU transport protein family KM404_RS03580 PF00005 ABC transporter KM404_RS03585 PF02653 Branched-chain amino acid transport system / permease component KM404_RS03590 PF13407 Periplasmic binding protein domain KM404_RS03595 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM404_RS03600 PF05547 Immune inhibitor A peptidase M6 KM404_RS03615 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS03615 PF00107 Zinc-binding dehydrogenase KM404_RS03625 PF00882 Zinc dependent phospholipase C KM404_RS03630 PF03372 Endonuclease/Exonuclease/phosphatase family KM404_RS03655 PF02673 Bacitracin resistance protein BacA KM404_RS03660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS03660 PF00672 HAMP domain KM404_RS03660 PF02743 Cache domain KM404_RS03665 PF06725 3D domain KM404_RS03665 PF01476 LysM domain KM404_RS03670 PF01381 Helix-turn-helix KM404_RS03680 PF04203 Sortase domain KM404_RS03685 PF00854 POT family KM404_RS03690 PF05525 Branched-chain amino acid transport protein KM404_RS03705 PF00324 Amino acid permease KM404_RS03710 PF00860 Permease family KM404_RS03735 PF02254 TrkA-N domain KM404_RS03735 PF02080 TrkA-C domain KM404_RS03735 PF00999 Sodium/hydrogen exchanger family KM404_RS03745 PF00510 Cytochrome c oxidase subunit III KM404_RS03750 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM404_RS03755 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM404_RS03760 PF13529 Peptidase_C39 like family KM404_RS03765 PF07687 Peptidase dimerisation domain KM404_RS03765 PF01546 Peptidase family M20/M25/M40 KM404_RS03770 PF11755 Protein of unknown function (DUF3311) KM404_RS03775 PF00474 Sodium:solute symporter family KM404_RS03780 PF03323 Bacillus/Clostridium GerA spore germination protein KM404_RS03785 PF03845 Spore germination protein KM404_RS03790 PF05504 Spore germination B3/ GerAC like, C-terminal KM404_RS03795 PF02421 Ferrous iron transport protein B KM404_RS03795 PF17910 FeoB cytosolic helical domain KM404_RS03795 PF07664 Ferrous iron transport protein B C terminus KM404_RS03795 PF07670 Nucleoside recognition KM404_RS03800 PF17910 FeoB cytosolic helical domain KM404_RS03800 PF02421 Ferrous iron transport protein B KM404_RS03800 PF07670 Nucleoside recognition KM404_RS03800 PF07664 Ferrous iron transport protein B C terminus KM404_RS03805 PF17910 FeoB cytosolic helical domain KM404_RS03805 PF07664 Ferrous iron transport protein B C terminus KM404_RS03805 PF04023 FeoA domain KM404_RS03805 PF02421 Ferrous iron transport protein B KM404_RS03805 PF07670 Nucleoside recognition KM404_RS03810 PF12849 PBP superfamily domain KM404_RS03815 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS03820 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS03830 PF00873 AcrB/AcrD/AcrF family KM404_RS03950 PF00571 CBS domain KM404_RS03965 PF08239 Bacterial SH3 domain KM404_RS03965 PF00246 Zinc carboxypeptidase KM404_RS03970 PF03070 TENA/THI-4/PQQC family KM404_RS03975 PF00005 ABC transporter KM404_RS03980 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS03985 PF09084 NMT1/THI5 like KM404_RS03990 PF02581 Thiamine monophosphate synthase KM404_RS03995 PF01266 FAD dependent oxidoreductase KM404_RS04000 PF02597 ThiS family KM404_RS04005 PF05690 Thiazole biosynthesis protein ThiG KM404_RS04010 PF00899 ThiF family KM404_RS04015 PF08543 Phosphomethylpyrimidine kinase KM404_RS04040 PF03814 Potassium-transporting ATPase A subunit KM404_RS04050 PF02669 K+-transporting ATPase, c chain KM404_RS04055 PF02702 Osmosensitive K+ channel His kinase sensor domain KM404_RS04060 PF07690 Major Facilitator Superfamily KM404_RS04065 PF01047 MarR family KM404_RS04080 PF00860 Permease family KM404_RS04100 PF00294 pfkB family carbohydrate kinase KM404_RS04105 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM404_RS04105 PF08244 Glycosyl hydrolases family 32 C terminal KM404_RS04110 PF02378 Phosphotransferase system, EIIC KM404_RS04110 PF00367 phosphotransferase system, EIIB KM404_RS04115 PF13407 Periplasmic binding protein domain KM404_RS04115 PF00356 Bacterial regulatory proteins, lacI family KM404_RS04125 PF00085 Thioredoxin KM404_RS04130 PF02600 Disulfide bond formation protein DsbB KM404_RS04135 PF14148 YhdB-like protein KM404_RS04155 PF03323 Bacillus/Clostridium GerA spore germination protein KM404_RS04165 PF00881 Nitroreductase family KM404_RS04170 PF04293 SpoVR like protein KM404_RS04195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM404_RS04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS04200 PF02583 Metal-sensitive transcriptional repressor KM404_RS04205 PF01206 Sulfurtransferase TusA KM404_RS04205 PF00581 Rhodanese-like domain KM404_RS04210 PF00581 Rhodanese-like domain KM404_RS04210 PF00753 Metallo-beta-lactamase superfamily KM404_RS04215 PF01206 Sulfurtransferase TusA KM404_RS04230 PF13686 DsrE/DsrF/DrsH-like family KM404_RS04235 PF01925 Sulfite exporter TauE/SafE KM404_RS04245 PF03816 Cell envelope-related transcriptional attenuator domain KM404_RS04250 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS04250 PF00107 Zinc-binding dehydrogenase KM404_RS04255 PF02690 Na+/Pi-cotransporter KM404_RS04260 PF07690 Major Facilitator Superfamily KM404_RS04270 PF08279 HTH domain KM404_RS04270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM404_RS04270 PF00874 PRD domain KM404_RS04270 PF05043 Mga helix-turn-helix domain KM404_RS04275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM404_RS04280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM404_RS04285 PF02378 Phosphotransferase system, EIIC KM404_RS04300 PF06725 3D domain KM404_RS04300 PF01476 LysM domain KM404_RS04305 PF02687 FtsX-like permease family KM404_RS04305 PF12704 MacB-like periplasmic core domain KM404_RS04310 PF00005 ABC transporter KM404_RS04320 PF09529 Integral membrane protein (intg_mem_TP0381) KM404_RS04335 PF05525 Branched-chain amino acid transport protein KM404_RS04340 PF05067 Manganese containing catalase KM404_RS04345 PF12652 CotJB protein KM404_RS04350 PF11007 Spore coat associated protein JA (CotJA) KM404_RS04365 PF02735 Ku70/Ku80 beta-barrel domain KM404_RS04375 PF09335 SNARE associated Golgi protein KM404_RS04410 PF13520 Amino acid permease KM404_RS04415 PF00999 Sodium/hydrogen exchanger family KM404_RS04425 PF01380 SIS domain KM404_RS04425 PF01418 Helix-turn-helix domain, rpiR family KM404_RS04430 PF01380 SIS domain KM404_RS04435 PF02378 Phosphotransferase system, EIIC KM404_RS04435 PF00367 phosphotransferase system, EIIB KM404_RS04445 PF07681 DoxX KM404_RS04460 PF00892 EamA-like transporter family KM404_RS04465 PF01037 Lrp/AsnC ligand binding domain KM404_RS04475 PF00893 Small Multidrug Resistance protein KM404_RS04480 PF00893 Small Multidrug Resistance protein KM404_RS04485 PF00440 Bacterial regulatory proteins, tetR family KM404_RS04485 PF17934 Tetracyclin repressor-like, C-terminal domain KM404_RS04490 PF07690 Major Facilitator Superfamily KM404_RS04495 PF01638 HxlR-like helix-turn-helix KM404_RS04505 PF02525 Flavodoxin-like fold KM404_RS04510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS04510 PF12793 Sugar transport-related sRNA regulator N-term KM404_RS04515 PF07690 Major Facilitator Superfamily KM404_RS04525 PF01965 DJ-1/PfpI family KM404_RS04530 PF00199 Catalase KM404_RS04530 PF06628 Catalase-related immune-responsive KM404_RS04530 PF18011 C-terminal domain found in long catalases KM404_RS04540 PF13520 Amino acid permease KM404_RS04545 PF01177 Asp/Glu/Hydantoin racemase KM404_RS04555 PF00171 Aldehyde dehydrogenase family KM404_RS04560 PF00005 ABC transporter KM404_RS04560 PF00664 ABC transporter transmembrane region KM404_RS04570 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM404_RS04575 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS04580 PF00005 ABC transporter KM404_RS04585 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM404_RS04595 PF14398 YheC/D like ATP-grasp KM404_RS04605 PF04286 Protein of unknown function (DUF445) KM404_RS04610 PF06133 Control of competence regulator ComK, YlbF/YmcA KM404_RS04625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM404_RS04625 PF00205 Thiamine pyrophosphate enzyme, central domain KM404_RS04625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM404_RS04630 PF03306 Alpha-acetolactate decarboxylase KM404_RS04640 PF02245 Methylpurine-DNA glycosylase (MPG) KM404_RS04660 PF04055 Radical SAM superfamily KM404_RS04665 PF13193 AMP-binding enzyme C-terminal domain KM404_RS04665 PF00501 AMP-binding enzyme KM404_RS04675 PF01740 STAS domain KM404_RS04675 PF00916 Sulfate permease family KM404_RS04695 PF07517 SecA DEAD-like domain KM404_RS04695 PF01043 SecA preprotein cross-linking domain KM404_RS04695 PF07516 SecA Wing and Scaffold domain KM404_RS04700 PF14667 Polysaccharide biosynthesis C-terminal domain KM404_RS04700 PF01943 Polysaccharide biosynthesis protein KM404_RS04710 PF02368 Bacterial Ig-like domain (group 2) KM404_RS04710 PF00395 S-layer homology domain KM404_RS04710 PF13205 Bacterial Ig-like domain KM404_RS04715 PF00395 S-layer homology domain KM404_RS04725 PF03062 MBOAT, membrane-bound O-acyltransferase family KM404_RS04730 PF03062 MBOAT, membrane-bound O-acyltransferase family KM404_RS04745 PF00378 Enoyl-CoA hydratase/isomerase KM404_RS04765 PF05343 M42 glutamyl aminopeptidase KM404_RS04770 PF01520 N-acetylmuramoyl-L-alanine amidase KM404_RS04770 PF00395 S-layer homology domain KM404_RS04785 PF05544 Proline racemase KM404_RS04790 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM404_RS04820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS04825 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS04830 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS04830 PF12911 N-terminal TM domain of oligopeptide transport permease C KM404_RS04840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS04840 PF00005 ABC transporter KM404_RS04875 PF00083 Sugar (and other) transporter KM404_RS04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS04880 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM404_RS04885 PF08279 HTH domain KM404_RS04885 PF12431 Transcriptional regulator KM404_RS04885 PF00072 Response regulator receiver domain KM404_RS04890 PF03401 Tripartite tricarboxylate transporter family receptor KM404_RS04895 PF02342 TerD domain KM404_RS04920 PF06445 GyrI-like small molecule binding domain KM404_RS04920 PF13411 MerR HTH family regulatory protein KM404_RS04935 PF03796 DnaB-like helicase C terminal domain KM404_RS04935 PF00772 DnaB-like helicase N terminal domain KM404_RS04960 PF01925 Sulfite exporter TauE/SafE KM404_RS04975 PF07690 Major Facilitator Superfamily KM404_RS05020 PF07993 Male sterility protein KM404_RS05020 PF00550 Phosphopantetheine attachment site KM404_RS05025 PF00440 Bacterial regulatory proteins, tetR family KM404_RS05025 PF18665 Tetracyclin repressor-like, C-terminal domain KM404_RS05045 PF01066 CDP-alcohol phosphatidyltransferase KM404_RS05065 PF02733 Dak1 domain KM404_RS05075 PF02733 Dak1 domain KM404_RS05080 PF02525 Flavodoxin-like fold KM404_RS05085 PF02082 Transcriptional regulator KM404_RS05115 PF00672 HAMP domain KM404_RS05115 PF01966 HD domain KM404_RS05135 PF00395 S-layer homology domain KM404_RS05160 PF11181 Heat induced stress protein YflT KM404_RS05165 PF05532 CsbD-like KM404_RS05180 PF01740 STAS domain KM404_RS05185 PF13581 Histidine kinase-like ATPase domain KM404_RS05190 PF04545 Sigma-70, region 4 KM404_RS05190 PF04539 Sigma-70 region 3 KM404_RS05190 PF04542 Sigma-70 region 2 KM404_RS05200 PF13426 PAS domain KM404_RS05200 PF07228 Stage II sporulation protein E (SpoIIE) KM404_RS05205 PF03705 CheR methyltransferase, all-alpha domain KM404_RS05205 PF01739 CheR methyltransferase, SAM binding domain KM404_RS05210 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM404_RS05210 PF00072 Response regulator receiver domain KM404_RS05210 PF01627 Hpt domain KM404_RS05210 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS05235 PF01906 Putative heavy-metal-binding KM404_RS05245 PF00107 Zinc-binding dehydrogenase KM404_RS05245 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS05250 PF11121 Protein of unknown function (DUF2639) KM404_RS05265 PF00149 Calcineurin-like phosphoesterase KM404_RS05275 PF01385 Probable transposase KM404_RS05275 PF07282 Putative transposase DNA-binding domain KM404_RS05275 PF12323 Helix-turn-helix domain KM404_RS05285 PF01966 HD domain KM404_RS05285 PF01336 OB-fold nucleic acid binding domain KM404_RS05290 PF00440 Bacterial regulatory proteins, tetR family KM404_RS05295 PF07690 Major Facilitator Superfamily KM404_RS05300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS05310 PF18801 response regulator aspartate phosphatase H, N terminal KM404_RS05315 PF00561 alpha/beta hydrolase fold KM404_RS05315 PF08386 TAP-like protein KM404_RS05335 PF04309 Glycerol-3-phosphate responsive antiterminator KM404_RS05340 PF00230 Major intrinsic protein KM404_RS05345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM404_RS05345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM404_RS05350 PF01266 FAD dependent oxidoreductase KM404_RS05350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM404_RS05365 PF04542 Sigma-70 region 2 KM404_RS05365 PF08281 Sigma-70, region 4 KM404_RS05390 PF07690 Major Facilitator Superfamily KM404_RS05395 PF07690 Major Facilitator Superfamily KM404_RS05405 PF13538 UvrD-like helicase C-terminal domain KM404_RS05425 PF01047 MarR family KM404_RS05430 PF12732 YtxH-like protein KM404_RS05435 PF01230 HIT domain KM404_RS05440 PF00005 ABC transporter KM404_RS05445 PF05975 Bacterial ABC transporter protein EcsB KM404_RS05450 PF12787 EcsC protein family KM404_RS05460 PF17934 Tetracyclin repressor-like, C-terminal domain KM404_RS05460 PF00440 Bacterial regulatory proteins, tetR family KM404_RS05470 PF03703 Bacterial PH domain KM404_RS05515 PF03703 Bacterial PH domain KM404_RS05520 PF03703 Bacterial PH domain KM404_RS05525 PF03992 Antibiotic biosynthesis monooxygenase KM404_RS05530 PF00912 Transglycosylase KM404_RS05530 PF00905 Penicillin binding protein transpeptidase domain KM404_RS05535 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM404_RS05540 PF00762 Ferrochelatase KM404_RS05545 PF01593 Flavin containing amine oxidoreductase KM404_RS05570 PF03965 Penicillinase repressor KM404_RS05580 PF17932 Tetracyclin repressor-like, C-terminal domain KM404_RS05580 PF00440 Bacterial regulatory proteins, tetR family KM404_RS05610 PF00356 Bacterial regulatory proteins, lacI family KM404_RS05615 PF14149 YhfH-like protein KM404_RS05620 PF12706 Beta-lactamase superfamily domain KM404_RS05625 PF03099 Biotin/lipoate A/B protein ligase family KM404_RS05625 PF10437 Bacterial lipoate protein ligase C-terminus KM404_RS05635 PF00501 AMP-binding enzyme KM404_RS05635 PF13193 AMP-binding enzyme C-terminal domain KM404_RS05645 PF01520 N-acetylmuramoyl-L-alanine amidase KM404_RS05645 PF00395 S-layer homology domain KM404_RS05650 PF05593 RHS Repeat KM404_RS05665 PF05593 RHS Repeat KM404_RS05705 PF01966 HD domain KM404_RS05715 PF04542 Sigma-70 region 2 KM404_RS05715 PF08281 Sigma-70, region 4 KM404_RS05720 PF06445 GyrI-like small molecule binding domain KM404_RS05720 PF12833 Helix-turn-helix domain KM404_RS05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS05735 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS05740 PF00486 Transcriptional regulatory protein, C terminal KM404_RS05740 PF00072 Response regulator receiver domain KM404_RS05765 PF01435 Peptidase family M48 KM404_RS05765 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM404_RS05770 PF02743 Cache domain KM404_RS05770 PF00672 HAMP domain KM404_RS05770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS05775 PF00892 EamA-like transporter family KM404_RS05780 PF03424 Carbohydrate binding domain (family 17/28) KM404_RS05780 PF00150 Cellulase (glycosyl hydrolase family 5) KM404_RS05780 PF00395 S-layer homology domain KM404_RS05790 PF00395 S-layer homology domain KM404_RS05795 PF01274 Malate synthase KM404_RS05800 PF00463 Isocitrate lyase family KM404_RS05810 PF00313 'Cold-shock' DNA-binding domain KM404_RS05825 PF06338 ComK protein KM404_RS05830 PF09335 SNARE associated Golgi protein KM404_RS05835 PF10502 Signal peptidase, peptidase S26 KM404_RS05840 PF13361 UvrD-like helicase C-terminal domain KM404_RS05840 PF12705 PD-(D/E)XK nuclease superfamily KM404_RS05845 PF13361 UvrD-like helicase C-terminal domain KM404_RS05845 PF00580 UvrD/REP helicase N-terminal domain KM404_RS05845 PF12705 PD-(D/E)XK nuclease superfamily KM404_RS05855 PF10676 Spore germination protein gerPA/gerPF KM404_RS05860 PF10970 Spore germination protein GerPE KM404_RS05870 PF10737 Spore germination protein GerPC KM404_RS05875 PF10803 Spore germination GerPB KM404_RS05880 PF10676 Spore germination protein gerPA/gerPF KM404_RS05890 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM404_RS05900 PF00202 Aminotransferase class-III KM404_RS05905 PF07457 Protein of unknown function (DUF1516) KM404_RS05915 PF13537 Glutamine amidotransferase domain KM404_RS05915 PF00733 Asparagine synthase KM404_RS05920 PF00762 Ferrochelatase KM404_RS05925 PF06628 Catalase-related immune-responsive KM404_RS05925 PF00199 Catalase KM404_RS05930 PF00909 Ammonium Transporter Family KM404_RS05935 PF00128 Alpha amylase, catalytic domain KM404_RS05945 PF04461 Protein of unknown function (DUF520) KM404_RS05950 PF13509 S1 domain KM404_RS05950 PF17783 CvfB-like winged helix domain KM404_RS05960 PF00639 PPIC-type PPIASE domain KM404_RS05970 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM404_RS05970 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS05975 PF12758 Protein of unknown function (DUF3813) KM404_RS05990 PF14168 YjzC-like protein KM404_RS05995 PF02861 Clp amino terminal domain, pathogenicity island component KM404_RS05995 PF17871 AAA lid domain KM404_RS05995 PF07724 AAA domain (Cdc48 subfamily) KM404_RS05995 PF10431 C-terminal, D2-small domain, of ClpB protein KM404_RS05995 PF00004 ATPase family associated with various cellular activities (AAA) KM404_RS06015 PF10815 ComZ KM404_RS06020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM404_RS06020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM404_RS06025 PF00109 Beta-ketoacyl synthase, N-terminal domain KM404_RS06025 PF02801 Beta-ketoacyl synthase, C-terminal domain KM404_RS06030 PF10026 Predicted Zn-dependent protease (DUF2268) KM404_RS06035 PF12227 Protein of unknown function (DUF3603) KM404_RS06040 PF00579 tRNA synthetases class I (W and Y) KM404_RS06050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS06055 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS06060 PF12911 N-terminal TM domain of oligopeptide transport permease C KM404_RS06060 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS06065 PF00005 ABC transporter KM404_RS06065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS06070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS06070 PF00005 ABC transporter KM404_RS06075 PF01554 MatE KM404_RS06080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS06090 PF03960 ArsC family KM404_RS06095 PF03741 Integral membrane protein TerC family KM404_RS06100 PF05389 Negative regulator of genetic competence (MecA) KM404_RS06105 PF13396 Phospholipase_D-nuclease N-terminal KM404_RS06105 PF13091 PLD-like domain KM404_RS06115 PF01432 Peptidase family M3 KM404_RS06115 PF08439 Oligopeptidase F KM404_RS06130 PF01152 Bacterial-like globin KM404_RS06135 PF01928 CYTH domain KM404_RS06145 PF04607 Region found in RelA / SpoT proteins KM404_RS06150 PF01513 ATP-NAD kinase KM404_RS06155 PF00849 RNA pseudouridylate synthase KM404_RS06165 PF00149 Calcineurin-like phosphoesterase KM404_RS06175 PF00535 Glycosyl transferase family 2 KM404_RS06180 PF08241 Methyltransferase domain KM404_RS06185 PF05711 Macrocin-O-methyltransferase (TylF) KM404_RS06195 PF00535 Glycosyl transferase family 2 KM404_RS06195 PF13181 Tetratricopeptide repeat KM404_RS06215 PF00483 Nucleotidyl transferase KM404_RS06220 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM404_RS06225 PF16363 GDP-mannose 4,6 dehydratase KM404_RS06230 PF04321 RmlD substrate binding domain KM404_RS06250 PF07098 Protein of unknown function (DUF1360) KM404_RS06270 PF13361 UvrD-like helicase C-terminal domain KM404_RS06270 PF00580 UvrD/REP helicase N-terminal domain KM404_RS06275 PF13673 Acetyltransferase (GNAT) domain KM404_RS06285 PF00756 Putative esterase KM404_RS06300 PF02368 Bacterial Ig-like domain (group 2) KM404_RS06305 PF00474 Sodium:solute symporter family KM404_RS06310 PF04715 Anthranilate synthase component I, N terminal region KM404_RS06310 PF00425 chorismate binding enzyme KM404_RS06315 PF00117 Glutamine amidotransferase class-I KM404_RS06315 PF02885 Glycosyl transferase family, helical bundle domain KM404_RS06315 PF00591 Glycosyl transferase family, a/b domain KM404_RS06320 PF02885 Glycosyl transferase family, helical bundle domain KM404_RS06320 PF00591 Glycosyl transferase family, a/b domain KM404_RS06325 PF00218 Indole-3-glycerol phosphate synthase KM404_RS06330 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM404_RS06335 PF00291 Pyridoxal-phosphate dependent enzyme KM404_RS06340 PF00290 Tryptophan synthase alpha chain KM404_RS06350 PF02652 L-lactate permease KM404_RS06355 PF10042 Uncharacterized conserved protein (DUF2278) KM404_RS06380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM404_RS06380 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS06410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM404_RS06410 PF02817 e3 binding domain KM404_RS06410 PF00364 Biotin-requiring enzyme KM404_RS06415 PF00676 Dehydrogenase E1 component KM404_RS06415 PF16870 2-oxoglutarate dehydrogenase C-terminal KM404_RS06415 PF02779 Transketolase, pyrimidine binding domain KM404_RS06420 PF01381 Helix-turn-helix KM404_RS06480 PF13649 Methyltransferase domain KM404_RS06490 PF00768 D-alanyl-D-alanine carboxypeptidase KM404_RS06490 PF07943 Penicillin-binding protein 5, C-terminal domain KM404_RS06500 PF12389 Camelysin metallo-endopeptidase KM404_RS06510 PF12389 Camelysin metallo-endopeptidase KM404_RS06515 PF01381 Helix-turn-helix KM404_RS06515 PF08671 Anti-repressor SinI KM404_RS06525 PF05547 Immune inhibitor A peptidase M6 KM404_RS06530 PF00171 Aldehyde dehydrogenase family KM404_RS06535 PF00005 ABC transporter KM404_RS06535 PF08402 TOBE domain KM404_RS06540 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS06545 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS06550 PF13416 Bacterial extracellular solute-binding protein KM404_RS06560 PF03176 MMPL family KM404_RS06570 PF01479 S4 domain KM404_RS06570 PF00849 RNA pseudouridylate synthase KM404_RS06580 PF00188 Cysteine-rich secretory protein family KM404_RS06585 PF02754 Cysteine-rich domain KM404_RS06585 PF13183 4Fe-4S dicluster domain KM404_RS06590 PF02913 FAD linked oxidases, C-terminal domain KM404_RS06590 PF01565 FAD binding domain KM404_RS06595 PF05651 Putative sugar diacid recognition KM404_RS06595 PF17853 GGDEF-like domain KM404_RS06595 PF13556 PucR C-terminal helix-turn-helix domain KM404_RS06605 PF00072 Response regulator receiver domain KM404_RS06605 PF00486 Transcriptional regulatory protein, C terminal KM404_RS06610 PF00672 HAMP domain KM404_RS06610 PF18698 Histidine kinase sensor domain KM404_RS06610 PF00989 PAS fold KM404_RS06610 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS06615 PF07729 FCD domain KM404_RS06615 PF00392 Bacterial regulatory proteins, gntR family KM404_RS06620 PF02754 Cysteine-rich domain KM404_RS06625 PF02589 LUD domain KM404_RS06625 PF11870 Domain of unknown function (DUF3390) KM404_RS06625 PF13183 4Fe-4S dicluster domain KM404_RS06630 PF02589 LUD domain KM404_RS06635 PF06750 Bacterial Peptidase A24 N-terminal domain KM404_RS06635 PF01478 Type IV leader peptidase family KM404_RS06645 PF01226 Formate/nitrite transporter KM404_RS06650 PF03741 Integral membrane protein TerC family KM404_RS06655 PF02386 Cation transport protein KM404_RS06660 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM404_RS06665 PF01575 MaoC like domain KM404_RS06690 PF00561 alpha/beta hydrolase fold KM404_RS06695 PF01266 FAD dependent oxidoreductase KM404_RS06700 PF02386 Cation transport protein KM404_RS06730 PF13419 Haloacid dehalogenase-like hydrolase KM404_RS06735 PF00266 Aminotransferase class-V KM404_RS06745 PF00455 DeoR C terminal sensor domain KM404_RS06745 PF08220 DeoR-like helix-turn-helix domain KM404_RS06765 PF04748 Divergent polysaccharide deacetylase KM404_RS06770 PF09388 Spo0E like sporulation regulatory protein KM404_RS06775 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS06775 PF02743 Cache domain KM404_RS06780 PF01047 MarR family KM404_RS06790 PF12867 DinB superfamily KM404_RS06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS06800 PF13426 PAS domain KM404_RS06800 PF13188 PAS domain KM404_RS06800 PF00989 PAS fold KM404_RS06800 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS06805 PF06508 Queuosine biosynthesis protein QueC KM404_RS06810 PF01242 6-pyruvoyl tetrahydropterin synthase KM404_RS06815 PF04055 Radical SAM superfamily KM404_RS06820 PF14489 QueF-like protein KM404_RS06825 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM404_RS06855 PF07972 NrdI Flavodoxin like KM404_RS06875 PF00268 Ribonucleotide reductase, small chain KM404_RS06880 PF00392 Bacterial regulatory proteins, gntR family KM404_RS06885 PF00005 ABC transporter KM404_RS06895 PF00005 ABC transporter KM404_RS06915 PF01037 Lrp/AsnC ligand binding domain KM404_RS06925 PF00857 Isochorismatase family KM404_RS06935 PF02016 LD-carboxypeptidase N-terminal domain KM404_RS06935 PF17676 LD-carboxypeptidase C-terminal domain KM404_RS06940 PF03060 Nitronate monooxygenase KM404_RS06945 PF04914 DltD protein KM404_RS06950 PF00550 Phosphopantetheine attachment site KM404_RS06955 PF03062 MBOAT, membrane-bound O-acyltransferase family KM404_RS06960 PF00501 AMP-binding enzyme KM404_RS06960 PF13193 AMP-binding enzyme C-terminal domain KM404_RS06970 PF07687 Peptidase dimerisation domain KM404_RS06970 PF01546 Peptidase family M20/M25/M40 KM404_RS06980 PF00258 Flavodoxin KM404_RS06995 PF01636 Phosphotransferase enzyme family KM404_RS07015 PF01554 MatE KM404_RS07020 PF02673 Bacitracin resistance protein BacA KM404_RS07035 PF01047 MarR family KM404_RS07045 PF00375 Sodium:dicarboxylate symporter family KM404_RS07050 PF02386 Cation transport protein KM404_RS07060 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM404_RS07070 PF03698 Uncharacterised protein family (UPF0180) KM404_RS07080 PF01063 Amino-transferase class IV KM404_RS07085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM404_RS07085 PF00205 Thiamine pyrophosphate enzyme, central domain KM404_RS07085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM404_RS07090 PF01842 ACT domain KM404_RS07090 PF10369 Small subunit of acetolactate synthase KM404_RS07095 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM404_RS07095 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM404_RS07100 PF00682 HMGL-like KM404_RS07100 PF08502 LeuA allosteric (dimerisation) domain KM404_RS07105 PF00180 Isocitrate/isopropylmalate dehydrogenase KM404_RS07110 PF00330 Aconitase family (aconitate hydratase) KM404_RS07115 PF00694 Aconitase C-terminal domain KM404_RS07120 PF13393 Histidyl-tRNA synthetase KM404_RS07125 PF01634 ATP phosphoribosyltransferase KM404_RS07130 PF00815 Histidinol dehydrogenase KM404_RS07135 PF00475 Imidazoleglycerol-phosphate dehydratase KM404_RS07140 PF00117 Glutamine amidotransferase class-I KM404_RS07145 PF00977 Histidine biosynthesis protein KM404_RS07150 PF00977 Histidine biosynthesis protein KM404_RS07155 PF01502 Phosphoribosyl-AMP cyclohydrolase KM404_RS07160 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM404_RS07165 PF02811 PHP domain KM404_RS07175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM404_RS07175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM404_RS07180 PF01066 CDP-alcohol phosphatidyltransferase KM404_RS07185 PF00884 Sulfatase KM404_RS07195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM404_RS07195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM404_RS07205 PF01507 Phosphoadenosine phosphosulfate reductase family KM404_RS07210 PF01747 ATP-sulfurylase KM404_RS07210 PF14306 PUA-like domain KM404_RS07220 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM404_RS07220 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM404_RS07230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM404_RS07235 PF01903 CbiX KM404_RS07245 PF00209 Sodium:neurotransmitter symporter family KM404_RS07255 PF00375 Sodium:dicarboxylate symporter family KM404_RS07265 PF03553 Na+/H+ antiporter family KM404_RS07280 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM404_RS07285 PF07730 Histidine kinase KM404_RS07285 PF00672 HAMP domain KM404_RS07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS07290 PF00196 Bacterial regulatory proteins, luxR family KM404_RS07290 PF00072 Response regulator receiver domain KM404_RS07300 PF05525 Branched-chain amino acid transport protein KM404_RS07310 PF08241 Methyltransferase domain KM404_RS07335 PF00175 Oxidoreductase NAD-binding domain KM404_RS07335 PF00042 Globin KM404_RS07335 PF00970 Oxidoreductase FAD-binding domain KM404_RS07350 PF01925 Sulfite exporter TauE/SafE KM404_RS07355 PF01384 Phosphate transporter family KM404_RS07360 PF01865 Protein of unknown function DUF47 KM404_RS07365 PF00905 Penicillin binding protein transpeptidase domain KM404_RS07365 PF00912 Transglycosylase KM404_RS07380 PF00989 PAS fold KM404_RS07380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS07380 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS07385 PF01904 Protein of unknown function DUF72 KM404_RS07395 PF00589 Phage integrase family KM404_RS07400 PF16736 Single Cache-like KM404_RS07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS07400 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS07400 PF00989 PAS fold KM404_RS07405 PF01048 Phosphorylase superfamily KM404_RS07420 PF09924 Uncharacterised conserved protein (DUF2156) KM404_RS07420 PF03706 Lysylphosphatidylglycerol synthase TM region KM404_RS07435 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM404_RS07435 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM404_RS07440 PF00768 D-alanyl-D-alanine carboxypeptidase KM404_RS07440 PF07943 Penicillin-binding protein 5, C-terminal domain KM404_RS07445 PF07670 Nucleoside recognition KM404_RS07450 PF07670 Nucleoside recognition KM404_RS07455 PF00849 RNA pseudouridylate synthase KM404_RS07455 PF01479 S4 domain KM404_RS07460 PF00578 AhpC/TSA family KM404_RS07465 PF05140 ResB-like family KM404_RS07470 PF01578 Cytochrome C assembly protein KM404_RS07475 PF00486 Transcriptional regulatory protein, C terminal KM404_RS07475 PF00072 Response regulator receiver domain KM404_RS07480 PF00672 HAMP domain KM404_RS07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS07480 PF18698 Histidine kinase sensor domain KM404_RS07480 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS07480 PF00989 PAS fold KM404_RS07485 PF01923 Cobalamin adenosyltransferase KM404_RS07500 PF12822 ECF transporter, substrate-specific component KM404_RS07510 PF14493 Helix-turn-helix domain KM404_RS07515 PF00271 Helicase conserved C-terminal domain KM404_RS07515 PF00270 DEAD/DEAH box helicase KM404_RS07520 PF02517 CPBP intramembrane metalloprotease KM404_RS07535 PF13411 MerR HTH family regulatory protein KM404_RS07535 PF02607 B12 binding domain KM404_RS07535 PF02310 B12 binding domain KM404_RS07540 PF05389 Negative regulator of genetic competence (MecA) KM404_RS07545 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM404_RS07545 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM404_RS07570 PF17763 Glutaminase/Asparaginase C-terminal domain KM404_RS07570 PF00710 Asparaginase, N-terminal KM404_RS07580 PF02224 Cytidylate kinase KM404_RS07585 PF00575 S1 RNA binding domain KM404_RS07590 PF01070 FMN-dependent dehydrogenase KM404_RS07595 PF14140 YpzI-like protein KM404_RS07605 PF14045 YIEGIA protein KM404_RS07615 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM404_RS07615 PF01926 50S ribosome-binding GTPase KM404_RS07620 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM404_RS07620 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM404_RS07630 PF10966 Protein of unknown function (DUF2768) KM404_RS07640 PF09547 Stage IV sporulation protein A (spore_IV_A) KM404_RS07645 PF00216 Bacterial DNA-binding protein KM404_RS07650 PF01227 GTP cyclohydrolase I KM404_RS07655 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM404_RS07660 PF01209 ubiE/COQ5 methyltransferase family KM404_RS07665 PF00348 Polyprenyl synthetase KM404_RS07670 PF00334 Nucleoside diphosphate kinase KM404_RS07675 PF01264 Chorismate synthase KM404_RS07680 PF01761 3-dehydroquinate synthase KM404_RS07685 PF00155 Aminotransferase class I and II KM404_RS07695 PF08864 UPF0302 domain KM404_RS07695 PF08858 IDEAL domain KM404_RS07700 PF10673 Protein of unknown function (DUF2487) KM404_RS07705 PF00355 Rieske [2Fe-2S] domain KM404_RS07710 PF00033 Cytochrome b/b6/petB KM404_RS07715 PF00032 Cytochrome b(C-terminal)/b6/petD KM404_RS07715 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM404_RS07720 PF07187 Protein of unknown function (DUF1405) KM404_RS07730 PF09577 Sporulation protein YpjB (SpoYpjB) KM404_RS07735 PF04298 Putative neutral zinc metallopeptidase KM404_RS07745 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS07745 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM404_RS07750 PF03819 MazG nucleotide pyrophosphohydrolase domain KM404_RS07755 PF01113 Dihydrodipicolinate reductase, N-terminus KM404_RS07755 PF05173 Dihydrodipicolinate reductase, C-terminus KM404_RS07760 PF02142 MGS-like domain KM404_RS07765 PF02585 GlcNAc-PI de-N-acetylase KM404_RS07770 PF13439 Glycosyltransferase Family 4 KM404_RS07770 PF00534 Glycosyl transferases group 1 KM404_RS07775 PF01743 Poly A polymerase head domain KM404_RS07775 PF12627 Probable RNA and SrmB- binding site of polymerase A KM404_RS07775 PF13735 tRNA nucleotidyltransferase domain 2 putative KM404_RS07780 PF02237 Biotin protein ligase C terminal domain KM404_RS07780 PF03099 Biotin/lipoate A/B protein ligase family KM404_RS07780 PF08279 HTH domain KM404_RS07790 PF02548 Ketopantoate hydroxymethyltransferase KM404_RS07795 PF02569 Pantoate-beta-alanine ligase KM404_RS07800 PF02261 Aspartate decarboxylase KM404_RS07810 PF14084 Protein of unknown function (DUF4264) KM404_RS07820 PF00155 Aminotransferase class I and II KM404_RS07825 PF07261 Replication initiation and membrane attachment KM404_RS07830 PF10576 Iron-sulfur binding domain of endonuclease III KM404_RS07830 PF00633 Helix-hairpin-helix motif KM404_RS07830 PF00730 HhH-GPD superfamily base excision DNA repair protein KM404_RS07845 PF03838 Recombination protein U KM404_RS07850 PF10720 Protein of unknown function (DUF2515) KM404_RS07885 PF06908 YspA SLOG family KM404_RS07890 PF05103 DivIVA protein KM404_RS07900 PF02926 THUMP domain KM404_RS07900 PF01170 Putative RNA methylase family UPF0020 KM404_RS07910 PF13307 Helicase C-terminal domain KM404_RS07915 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM404_RS07925 PF01636 Phosphotransferase enzyme family KM404_RS07930 PF00557 Metallopeptidase family M24 KM404_RS07935 PF00156 Phosphoribosyl transferase domain KM404_RS07940 PF00860 Permease family KM404_RS07945 PF04235 Protein of unknown function (DUF418) KM404_RS07950 PF00350 Dynamin family KM404_RS07960 PF00583 Acetyltransferase (GNAT) family KM404_RS07965 PF10752 Protein of unknown function (DUF2533) KM404_RS07970 PF00581 Rhodanese-like domain KM404_RS08005 PF00689 Cation transporting ATPase, C-terminus KM404_RS08005 PF00690 Cation transporter/ATPase, N-terminus KM404_RS08010 PF01367 5'-3' exonuclease, C-terminal SAM fold KM404_RS08010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM404_RS08035 PF02397 Bacterial sugar transferase KM404_RS08050 PF00535 Glycosyl transferase family 2 KM404_RS08055 PF13439 Glycosyltransferase Family 4 KM404_RS08055 PF00534 Glycosyl transferases group 1 KM404_RS08070 PF13673 Acetyltransferase (GNAT) domain KM404_RS08070 PF18014 Acetyltransferase (GNAT) domain KM404_RS08090 PF13456 Reverse transcriptase-like KM404_RS08095 PF01263 Aldose 1-epimerase KM404_RS08120 PF00313 'Cold-shock' DNA-binding domain KM404_RS08130 PF01810 LysE type translocator KM404_RS08145 PF04341 Protein of unknown function, DUF485 KM404_RS08150 PF00474 Sodium:solute symporter family KM404_RS08155 PF00202 Aminotransferase class-III KM404_RS08165 PF00999 Sodium/hydrogen exchanger family KM404_RS08170 PF00753 Metallo-beta-lactamase superfamily KM404_RS08170 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM404_RS08170 PF17770 Ribonuclease J C-terminal domain KM404_RS08175 PF06445 GyrI-like small molecule binding domain KM404_RS08175 PF13411 MerR HTH family regulatory protein KM404_RS08185 PF04239 Protein of unknown function (DUF421) KM404_RS08190 PF02698 DUF218 domain KM404_RS08200 PF00881 Nitroreductase family KM404_RS08245 PF17209 Hfq protein KM404_RS08255 PF01618 MotA/TolQ/ExbB proton channel family KM404_RS08260 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM404_RS08260 PF00691 OmpA family KM404_RS08265 PF00072 Response regulator receiver domain KM404_RS08275 PF04509 CheC-like family KM404_RS08275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM404_RS08290 PF01739 CheR methyltransferase, SAM binding domain KM404_RS08290 PF03705 CheR methyltransferase, all-alpha domain KM404_RS08310 PF00460 Flagella basal body rod protein KM404_RS08310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM404_RS08335 PF00460 Flagella basal body rod protein KM404_RS08340 PF00460 Flagella basal body rod protein KM404_RS08340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM404_RS08345 PF02049 Flagellar hook-basal body complex protein FliE KM404_RS08355 PF14842 FliG N-terminal domain KM404_RS08355 PF01706 FliG C-terminal domain KM404_RS08355 PF14841 FliG middle domain KM404_RS08365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM404_RS08365 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM404_RS08365 PF18269 T3SS EscN ATPase C-terminal domain KM404_RS08385 PF07559 Flagellar basal body protein FlaE KM404_RS08385 PF00460 Flagella basal body rod protein KM404_RS08385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM404_RS08400 PF00072 Response regulator receiver domain KM404_RS08400 PF01584 CheW-like domain KM404_RS08405 PF12181 DNA binding domain of the motility gene repressor (MogR) KM404_RS08410 PF00535 Glycosyl transferase family 2 KM404_RS08435 PF00535 Glycosyl transferase family 2 KM404_RS08435 PF13181 Tetratricopeptide repeat KM404_RS08450 PF00700 Bacterial flagellin C-terminal helical region KM404_RS08450 PF00669 Bacterial flagellin N-terminal helical region KM404_RS08455 PF01464 Transglycosylase SLT domain KM404_RS08470 PF04509 CheC-like family KM404_RS08470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM404_RS08480 PF00813 FliP family KM404_RS08485 PF01313 Bacterial export proteins, family 3 KM404_RS08495 PF01312 FlhB HrpN YscU SpaS Family KM404_RS08500 PF00771 FHIPEP family KM404_RS08505 PF00448 SRP54-type protein, GTPase domain KM404_RS08510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM404_RS08510 PF00460 Flagella basal body rod protein KM404_RS08515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM404_RS08515 PF01411 tRNA synthetases class II (A) KM404_RS08515 PF02272 DHHA1 domain KM404_RS08540 PF17932 Tetracyclin repressor-like, C-terminal domain KM404_RS08540 PF00440 Bacterial regulatory proteins, tetR family KM404_RS08545 PF17329 Family of unknown function (DUF5367) KM404_RS08560 PF03992 Antibiotic biosynthesis monooxygenase KM404_RS08565 PF08141 Small acid-soluble spore protein H family KM404_RS08585 PF03466 LysR substrate binding domain KM404_RS08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS08600 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS08605 PF12706 Beta-lactamase superfamily domain KM404_RS08605 PF00753 Metallo-beta-lactamase superfamily KM404_RS08630 PF00768 D-alanyl-D-alanine carboxypeptidase KM404_RS08630 PF07943 Penicillin-binding protein 5, C-terminal domain KM404_RS08640 PF00300 Histidine phosphatase superfamily (branch 1) KM404_RS08670 PF00733 Asparagine synthase KM404_RS08670 PF13537 Glutamine amidotransferase domain KM404_RS08690 PF16916 Dimerisation domain of Zinc Transporter KM404_RS08690 PF01545 Cation efflux family KM404_RS08700 PF07729 FCD domain KM404_RS08700 PF00392 Bacterial regulatory proteins, gntR family KM404_RS08705 PF00892 EamA-like transporter family KM404_RS08710 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM404_RS08710 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM404_RS08715 PF03773 Predicted permease KM404_RS08725 PF00535 Glycosyl transferase family 2 KM404_RS08730 PF03553 Na+/H+ antiporter family KM404_RS08735 PF10415 Fumarase C C-terminus KM404_RS08735 PF00206 Lyase KM404_RS08760 PF03575 Peptidase family S51 KM404_RS08780 PF02683 Cytochrome C biogenesis protein transmembrane region KM404_RS08785 PF00578 AhpC/TSA family KM404_RS08805 PF00291 Pyridoxal-phosphate dependent enzyme KM404_RS08810 PF04286 Protein of unknown function (DUF445) KM404_RS08835 PF00072 Response regulator receiver domain KM404_RS08835 PF00196 Bacterial regulatory proteins, luxR family KM404_RS08840 PF07730 Histidine kinase KM404_RS08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS08840 PF13492 GAF domain KM404_RS08840 PF13185 GAF domain KM404_RS08845 PF00005 ABC transporter KM404_RS08860 PF13091 PLD-like domain KM404_RS08865 PF00696 Amino acid kinase family KM404_RS08870 PF00375 Sodium:dicarboxylate symporter family KM404_RS08875 PF10415 Fumarase C C-terminus KM404_RS08875 PF00206 Lyase KM404_RS08880 PF03949 Malic enzyme, NAD binding domain KM404_RS08880 PF00390 Malic enzyme, N-terminal domain KM404_RS08885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS08890 PF08664 YcbB domain KM404_RS08890 PF00072 Response regulator receiver domain KM404_RS08895 PF00176 SNF2 family N-terminal domain KM404_RS08895 PF00271 Helicase conserved C-terminal domain KM404_RS08895 PF04434 SWIM zinc finger KM404_RS08910 PF03590 Aspartate-ammonia ligase KM404_RS08930 PF00696 Amino acid kinase family KM404_RS08930 PF13840 ACT domain KM404_RS08940 PF13761 Domain of unknown function (DUF4166) KM404_RS08945 PF14158 YndJ-like protein KM404_RS08955 PF02368 Bacterial Ig-like domain (group 2) KM404_RS08955 PF13205 Bacterial Ig-like domain KM404_RS08955 PF00395 S-layer homology domain KM404_RS08965 PF07690 Major Facilitator Superfamily KM404_RS08980 PF02554 Carbon starvation protein CstA KM404_RS08985 PF03976 Polyphosphate kinase 2 (PPK2) KM404_RS08995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM404_RS08995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM404_RS09005 PF01926 50S ribosome-binding GTPase KM404_RS09005 PF13167 GTP-binding GTPase N-terminal KM404_RS09005 PF16360 GTP-binding GTPase Middle Region KM404_RS09015 PF07690 Major Facilitator Superfamily KM404_RS09020 PF00291 Pyridoxal-phosphate dependent enzyme KM404_RS09035 PF14667 Polysaccharide biosynthesis C-terminal domain KM404_RS09035 PF01943 Polysaccharide biosynthesis protein KM404_RS09040 PF00209 Sodium:neurotransmitter symporter family KM404_RS09045 PF03422 Carbohydrate binding module (family 6) KM404_RS09045 PF00457 Glycosyl hydrolases family 11 KM404_RS09045 PF01522 Polysaccharide deacetylase KM404_RS09055 PF04239 Protein of unknown function (DUF421) KM404_RS09075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM404_RS09075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM404_RS09090 PF01625 Peptide methionine sulfoxide reductase KM404_RS09100 PF01063 Amino-transferase class IV KM404_RS09105 PF00205 Thiamine pyrophosphate enzyme, central domain KM404_RS09105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM404_RS09105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM404_RS09110 PF10369 Small subunit of acetolactate synthase KM404_RS09115 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM404_RS09115 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM404_RS09120 PF00920 Dehydratase family KM404_RS09125 PF00585 C-terminal regulatory domain of Threonine dehydratase KM404_RS09125 PF00291 Pyridoxal-phosphate dependent enzyme KM404_RS09135 PF09587 Bacterial capsule synthesis protein PGA_cap KM404_RS09150 PF07690 Major Facilitator Superfamily KM404_RS09155 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM404_RS09165 PF04397 LytTr DNA-binding domain KM404_RS09165 PF00072 Response regulator receiver domain KM404_RS09170 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM404_RS09170 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM404_RS09185 PF01979 Amidohydrolase family KM404_RS09190 PF13026 Protein of unknown function (DUF3887) KM404_RS09190 PF12146 Serine aminopeptidase, S33 KM404_RS09220 PF04055 Radical SAM superfamily KM404_RS09220 PF13186 Iron-sulfur cluster-binding domain KM404_RS09225 PF13302 Acetyltransferase (GNAT) domain KM404_RS09230 PF00072 Response regulator receiver domain KM404_RS09230 PF00486 Transcriptional regulatory protein, C terminal KM404_RS09245 PF01566 Natural resistance-associated macrophage protein KM404_RS09250 PF00581 Rhodanese-like domain KM404_RS09250 PF12368 Rhodanase C-terminal KM404_RS09250 PF17773 UPF0176 acylphosphatase like domain KM404_RS09260 PF02558 Ketopantoate reductase PanE/ApbA KM404_RS09260 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM404_RS09275 PF05791 Bacillus haemolytic enterotoxin (HBL) KM404_RS09290 PF04198 Putative sugar-binding domain KM404_RS09295 PF01791 DeoC/LacD family aldolase KM404_RS09300 PF01773 Na+ dependent nucleoside transporter N-terminus KM404_RS09300 PF07662 Na+ dependent nucleoside transporter C-terminus KM404_RS09305 PF02885 Glycosyl transferase family, helical bundle domain KM404_RS09305 PF00591 Glycosyl transferase family, a/b domain KM404_RS09305 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM404_RS09310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM404_RS09320 PF05979 Bacterial protein of unknown function (DUF896) KM404_RS09340 PF00557 Metallopeptidase family M24 KM404_RS09340 PF05195 Aminopeptidase P, N-terminal domain KM404_RS09345 PF07731 Multicopper oxidase KM404_RS09345 PF07732 Multicopper oxidase KM404_RS09350 PF01551 Peptidase family M23 KM404_RS09360 PF01131 DNA topoisomerase KM404_RS09360 PF01751 Toprim domain KM404_RS09360 PF13342 C-terminal repeat of topoisomerase KM404_RS09360 PF01396 Topoisomerase DNA binding C4 zinc finger KM404_RS09375 PF02525 Flavodoxin-like fold KM404_RS09390 PF13115 YtkA-like KM404_RS09390 PF04234 CopC domain KM404_RS09390 PF05425 Copper resistance protein D KM404_RS09395 PF07987 Domain of unkown function (DUF1775) KM404_RS09405 PF00892 EamA-like transporter family KM404_RS09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS09410 PF03466 LysR substrate binding domain KM404_RS09415 PF02082 Transcriptional regulator KM404_RS09420 PF01323 DSBA-like thioredoxin domain KM404_RS09425 PF00881 Nitroreductase family KM404_RS09430 PF01425 Amidase KM404_RS09435 PF01594 AI-2E family transporter KM404_RS09440 PF00056 lactate/malate dehydrogenase, NAD binding domain KM404_RS09440 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM404_RS09445 PF01593 Flavin containing amine oxidoreductase KM404_RS09450 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM404_RS09450 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM404_RS09465 PF00501 AMP-binding enzyme KM404_RS09465 PF13193 AMP-binding enzyme C-terminal domain KM404_RS09470 PF01575 MaoC like domain KM404_RS09475 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM404_RS09475 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM404_RS09485 PF00005 ABC transporter KM404_RS09485 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM404_RS09490 PF00005 ABC transporter KM404_RS09495 PF02653 Branched-chain amino acid transport system / permease component KM404_RS09505 PF03466 LysR substrate binding domain KM404_RS09505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS09515 PF14552 Tautomerase enzyme KM404_RS09525 PF01047 MarR family KM404_RS09535 PF01654 Cytochrome bd terminal oxidase subunit I KM404_RS09540 PF02322 Cytochrome bd terminal oxidase subunit II KM404_RS09545 PF00005 ABC transporter KM404_RS09545 PF00664 ABC transporter transmembrane region KM404_RS09550 PF00005 ABC transporter KM404_RS09550 PF00664 ABC transporter transmembrane region KM404_RS09565 PF02016 LD-carboxypeptidase N-terminal domain KM404_RS09565 PF17676 LD-carboxypeptidase C-terminal domain KM404_RS09570 PF07943 Penicillin-binding protein 5, C-terminal domain KM404_RS09570 PF00768 D-alanyl-D-alanine carboxypeptidase KM404_RS09585 PF00877 NlpC/P60 family KM404_RS09585 PF01476 LysM domain KM404_RS09600 PF00486 Transcriptional regulatory protein, C terminal KM404_RS09600 PF00072 Response regulator receiver domain KM404_RS09605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS09605 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS09605 PF00989 PAS fold KM404_RS09605 PF16736 Single Cache-like KM404_RS09615 PF00106 short chain dehydrogenase KM404_RS09625 PF04439 Streptomycin adenylyltransferase KM404_RS09630 PF01522 Polysaccharide deacetylase KM404_RS09650 PF00742 Homoserine dehydrogenase KM404_RS09650 PF01842 ACT domain KM404_RS09650 PF03447 Homoserine dehydrogenase, NAD binding domain KM404_RS09655 PF00291 Pyridoxal-phosphate dependent enzyme KM404_RS09660 PF08544 GHMP kinases C terminal KM404_RS09660 PF00288 GHMP kinases N terminal domain KM404_RS09675 PF03816 Cell envelope-related transcriptional attenuator domain KM404_RS09685 PF00072 Response regulator receiver domain KM404_RS09685 PF00486 Transcriptional regulatory protein, C terminal KM404_RS09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS09690 PF16736 Single Cache-like KM404_RS09690 PF00989 PAS fold KM404_RS09690 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS09695 PF01522 Polysaccharide deacetylase KM404_RS09705 PF02308 MgtC family KM404_RS09710 PF00583 Acetyltransferase (GNAT) family KM404_RS09715 PF06276 Ferric iron reductase FhuF-like transporter KM404_RS09715 PF04183 IucA / IucC family KM404_RS09720 PF04183 IucA / IucC family KM404_RS09720 PF06276 Ferric iron reductase FhuF-like transporter KM404_RS09725 PF00501 AMP-binding enzyme KM404_RS09725 PF13193 AMP-binding enzyme C-terminal domain KM404_RS09740 PF01261 Xylose isomerase-like TIM barrel KM404_RS09745 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM404_RS09755 PF01810 LysE type translocator KM404_RS09765 PF01734 Patatin-like phospholipase KM404_RS09790 PF13344 Haloacid dehalogenase-like hydrolase KM404_RS09790 PF00293 NUDIX domain KM404_RS09795 PF02540 NAD synthase KM404_RS09805 PF18277 AbrB C-terminal domain KM404_RS09805 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM404_RS09810 PF00082 Subtilase family KM404_RS09815 PF01022 Bacterial regulatory protein, arsR family KM404_RS09820 PF00248 Aldo/keto reductase family KM404_RS09825 PF07690 Major Facilitator Superfamily KM404_RS09845 PF03193 RsgA GTPase KM404_RS09850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS09850 PF00672 HAMP domain KM404_RS09850 PF02743 Cache domain KM404_RS09870 PF00210 Ferritin-like domain KM404_RS09885 PF00296 Luciferase-like monooxygenase KM404_RS09895 PF01593 Flavin containing amine oxidoreductase KM404_RS09905 PF00248 Aldo/keto reductase family KM404_RS09910 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM404_RS09910 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM404_RS09915 PF00583 Acetyltransferase (GNAT) family KM404_RS09975 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM404_RS09975 PF01297 Zinc-uptake complex component A periplasmic KM404_RS09985 PF13460 NAD(P)H-binding KM404_RS09990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM404_RS09995 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM404_RS09995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM404_RS10005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS10010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS10020 PF00300 Histidine phosphatase superfamily (branch 1) KM404_RS10030 PF08757 CotH kinase protein KM404_RS10035 PF00293 NUDIX domain KM404_RS10040 PF09335 SNARE associated Golgi protein KM404_RS10045 PF14667 Polysaccharide biosynthesis C-terminal domain KM404_RS10045 PF01943 Polysaccharide biosynthesis protein KM404_RS10055 PF03773 Predicted permease KM404_RS10060 PF09323 Domain of unknown function (DUF1980) KM404_RS10065 PF03061 Thioesterase superfamily KM404_RS10075 PF13396 Phospholipase_D-nuclease N-terminal KM404_RS10075 PF13091 PLD-like domain KM404_RS10090 PF13460 NAD(P)H-binding KM404_RS10095 PF04306 Protein of unknown function (DUF456) KM404_RS10100 PF03471 Transporter associated domain KM404_RS10100 PF00571 CBS domain KM404_RS10100 PF01595 Cyclin M transmembrane N-terminal domain KM404_RS10115 PF05525 Branched-chain amino acid transport protein KM404_RS10120 PF01588 Putative tRNA binding domain KM404_RS10140 PF07454 Stage II sporulation protein P (SpoIIP) KM404_RS10150 PF02557 D-alanyl-D-alanine carboxypeptidase KM404_RS10160 PF01425 Amidase KM404_RS10165 PF07690 Major Facilitator Superfamily KM404_RS10175 PF01145 SPFH domain / Band 7 family KM404_RS10180 PF00300 Histidine phosphatase superfamily (branch 1) KM404_RS10195 PF00842 Alanine racemase, C-terminal domain KM404_RS10195 PF01168 Alanine racemase, N-terminal domain KM404_RS10200 PF13847 Methyltransferase domain KM404_RS10215 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM404_RS10220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM404_RS10220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS10225 PF00392 Bacterial regulatory proteins, gntR family KM404_RS10225 PF00155 Aminotransferase class I and II KM404_RS10260 PF00583 Acetyltransferase (GNAT) family KM404_RS10315 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM404_RS10340 PF01209 ubiE/COQ5 methyltransferase family KM404_RS10345 PF01268 Formate--tetrahydrofolate ligase KM404_RS10355 PF00270 DEAD/DEAH box helicase KM404_RS10355 PF00271 Helicase conserved C-terminal domain KM404_RS10365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS10375 PF00107 Zinc-binding dehydrogenase KM404_RS10375 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS10380 PF04542 Sigma-70 region 2 KM404_RS10380 PF08281 Sigma-70, region 4 KM404_RS10405 PF00255 Glutathione peroxidase KM404_RS10410 PF13559 Domain of unknown function (DUF4129) KM404_RS10410 PF01841 Transglutaminase-like superfamily KM404_RS10410 PF11992 Domain of unknown function (DUF3488) KM404_RS10415 PF01882 Protein of unknown function DUF58 KM404_RS10420 PF17863 AAA lid domain KM404_RS10420 PF07726 ATPase family associated with various cellular activities (AAA) KM404_RS10435 PF00384 Molybdopterin oxidoreductase KM404_RS10435 PF01568 Molydopterin dinucleotide binding domain KM404_RS10435 PF14710 Respiratory nitrate reductase alpha N-terminal KM404_RS10440 PF14711 Respiratory nitrate reductase beta C-terminal KM404_RS10440 PF13247 4Fe-4S dicluster domain KM404_RS10445 PF02613 Nitrate reductase delta subunit KM404_RS10450 PF02665 Nitrate reductase gamma subunit KM404_RS10455 PF00155 Aminotransferase class I and II KM404_RS10455 PF00392 Bacterial regulatory proteins, gntR family KM404_RS10460 PF00005 ABC transporter KM404_RS10470 PF00325 Bacterial regulatory proteins, crp family KM404_RS10470 PF00027 Cyclic nucleotide-binding domain KM404_RS10475 PF04055 Radical SAM superfamily KM404_RS10475 PF06463 Molybdenum Cofactor Synthesis C KM404_RS10480 PF00899 ThiF family KM404_RS10485 PF03453 MoeA N-terminal region (domain I and II) KM404_RS10485 PF03454 MoeA C-terminal region (domain IV) KM404_RS10485 PF00994 Probable molybdopterin binding domain KM404_RS10490 PF02391 MoaE protein KM404_RS10500 PF07690 Major Facilitator Superfamily KM404_RS10520 PF01903 CbiX KM404_RS10525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM404_RS10530 PF00355 Rieske [2Fe-2S] domain KM404_RS10535 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS10535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM404_RS10535 PF04324 BFD-like [2Fe-2S] binding domain KM404_RS10535 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM404_RS10535 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM404_RS10540 PF04405 Domain of Unknown function (DUF542) KM404_RS10540 PF01814 Hemerythrin HHE cation binding domain KM404_RS10575 PF04232 Stage V sporulation protein S (SpoVS) KM404_RS10600 PF01966 HD domain KM404_RS10605 PF00005 ABC transporter KM404_RS10605 PF16326 ABC transporter C-terminal domain KM404_RS10605 PF12848 ABC transporter KM404_RS10620 PF00436 Single-strand binding protein family KM404_RS10625 PF00440 Bacterial regulatory proteins, tetR family KM404_RS10635 PF08712 Scaffold protein Nfu/NifU N terminal KM404_RS10635 PF13769 Virulence factor KM404_RS10645 PF06491 Disulphide isomerase KM404_RS10650 PF04445 Putative SAM-dependent methyltransferase KM404_RS10655 PF00750 tRNA synthetases class I (R) KM404_RS10655 PF03485 Arginyl tRNA synthetase N terminal domain KM404_RS10655 PF05746 DALR anticodon binding domain KM404_RS10680 PF08264 Anticodon-binding domain of tRNA KM404_RS10680 PF00133 tRNA synthetases class I (I, L, M and V) KM404_RS10700 PF01336 OB-fold nucleic acid binding domain KM404_RS10700 PF00152 tRNA synthetases class II (D, K and N) KM404_RS10720 PF12538 DNA transporter KM404_RS10720 PF01580 FtsK/SpoIIIE family KM404_RS10790 PF02595 Glycerate kinase family KM404_RS10795 PF00939 Sodium:sulfate symporter transmembrane region KM404_RS10800 PF00486 Transcriptional regulatory protein, C terminal KM404_RS10800 PF00072 Response regulator receiver domain KM404_RS10805 PF00672 HAMP domain KM404_RS10805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS10805 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS10820 PF00209 Sodium:neurotransmitter symporter family KM404_RS10835 PF10997 Alternate to MurJ KM404_RS10840 PF13419 Haloacid dehalogenase-like hydrolase KM404_RS10850 PF00465 Iron-containing alcohol dehydrogenase KM404_RS10855 PF01177 Asp/Glu/Hydantoin racemase KM404_RS10860 PF01980 tRNA-methyltransferase O KM404_RS10865 PF00583 Acetyltransferase (GNAT) family KM404_RS10880 PF00005 ABC transporter KM404_RS10890 PF14005 YpjP-like protein KM404_RS10895 PF13419 Haloacid dehalogenase-like hydrolase KM404_RS10915 PF00144 Beta-lactamase KM404_RS10915 PF07930 D-aminopeptidase, domain B KM404_RS10920 PF00303 Thymidylate synthase KM404_RS10925 PF00186 Dihydrofolate reductase KM404_RS10930 PF03717 Penicillin-binding Protein dimerisation domain KM404_RS10930 PF00905 Penicillin binding protein transpeptidase domain KM404_RS10930 PF05223 NTF2-like N-terminal transpeptidase domain KM404_RS10935 PF02525 Flavodoxin-like fold KM404_RS10940 PF01553 Acyltransferase KM404_RS10945 PF03006 Haemolysin-III related KM404_RS10950 PF02416 mttA/Hcf106 family KM404_RS10955 PF00902 Sec-independent protein translocase protein (TatC) KM404_RS10965 PF02645 Uncharacterised protein, DegV family COG1307 KM404_RS10975 PF02630 SCO1/SenC KM404_RS10980 PF00011 Hsp20/alpha crystallin family KM404_RS10985 PF00733 Asparagine synthase KM404_RS10985 PF13537 Glutamine amidotransferase domain KM404_RS11000 PF01497 Periplasmic binding protein KM404_RS11005 PF01063 Amino-transferase class IV KM404_RS11010 PF00881 Nitroreductase family KM404_RS11035 PF00011 Hsp20/alpha crystallin family KM404_RS11040 PF00924 Mechanosensitive ion channel KM404_RS11045 PF13185 GAF domain KM404_RS11045 PF07730 Histidine kinase KM404_RS11050 PF00196 Bacterial regulatory proteins, luxR family KM404_RS11050 PF00072 Response regulator receiver domain KM404_RS11060 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS11060 PF00107 Zinc-binding dehydrogenase KM404_RS11100 PF03358 NADPH-dependent FMN reductase KM404_RS11115 PF00571 CBS domain KM404_RS11115 PF00005 ABC transporter KM404_RS11120 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS11125 PF13520 Amino acid permease KM404_RS11155 PF01595 Cyclin M transmembrane N-terminal domain KM404_RS11155 PF03471 Transporter associated domain KM404_RS11155 PF00571 CBS domain KM404_RS11160 PF00171 Aldehyde dehydrogenase family KM404_RS11165 PF07997 Protein of unknown function (DUF1694) KM404_RS11170 PF09385 Histidine kinase N terminal KM404_RS11180 PF00202 Aminotransferase class-III KM404_RS11185 PF01144 Coenzyme A transferase KM404_RS11195 PF07687 Peptidase dimerisation domain KM404_RS11195 PF01546 Peptidase family M20/M25/M40 KM404_RS11200 PF00583 Acetyltransferase (GNAT) family KM404_RS11205 PF02954 Bacterial regulatory protein, Fis family KM404_RS11205 PF13426 PAS domain KM404_RS11205 PF00158 Sigma-54 interaction domain KM404_RS11210 PF12544 Lysine-2,3-aminomutase KM404_RS11215 PF14122 YokU-like protein, putative antitoxin KM404_RS11220 PF06855 YozE SAM-like fold KM404_RS11235 PF14162 YozD-like protein KM404_RS11250 PF07070 SpoOM protein KM404_RS11255 PF01569 PAP2 superfamily KM404_RS11260 PF16916 Dimerisation domain of Zinc Transporter KM404_RS11260 PF01545 Cation efflux family KM404_RS11265 PF00085 Thioredoxin KM404_RS11280 PF04740 LXG domain of WXG superfamily KM404_RS11280 PF14436 Bacterial EndoU nuclease KM404_RS11285 PF00395 S-layer homology domain KM404_RS11285 PF03424 Carbohydrate binding domain (family 17/28) KM404_RS11285 PF00150 Cellulase (glycosyl hydrolase family 5) KM404_RS11295 PF04471 Restriction endonuclease KM404_RS11405 PF10676 Spore germination protein gerPA/gerPF KM404_RS11425 PF00912 Transglycosylase KM404_RS11425 PF00905 Penicillin binding protein transpeptidase domain KM404_RS11435 PF07690 Major Facilitator Superfamily KM404_RS11440 PF01521 Iron-sulphur cluster biosynthesis KM404_RS11445 PF00285 Citrate synthase, C-terminal domain KM404_RS11450 PF03972 MmgE/PrpD family KM404_RS11460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM404_RS11460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM404_RS11460 PF02770 Acyl-CoA dehydrogenase, middle domain KM404_RS11465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM404_RS11465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM404_RS11470 PF00171 Aldehyde dehydrogenase family KM404_RS11475 PF01810 LysE type translocator KM404_RS11480 PF00378 Enoyl-CoA hydratase/isomerase KM404_RS11490 PF10763 Protein of unknown function (DUF2584) KM404_RS11495 PF12320 Type 5 capsule protein repressor C-terminal domain KM404_RS11495 PF00149 Calcineurin-like phosphoesterase KM404_RS11500 PF13476 AAA domain KM404_RS11510 PF01022 Bacterial regulatory protein, arsR family KM404_RS11520 PF07690 Major Facilitator Superfamily KM404_RS11525 PF00106 short chain dehydrogenase KM404_RS11530 PF00425 chorismate binding enzyme KM404_RS11535 PF13193 AMP-binding enzyme C-terminal domain KM404_RS11535 PF00501 AMP-binding enzyme KM404_RS11540 PF00550 Phosphopantetheine attachment site KM404_RS11540 PF00857 Isochorismatase family KM404_RS11545 PF00501 AMP-binding enzyme KM404_RS11545 PF13193 AMP-binding enzyme C-terminal domain KM404_RS11545 PF00668 Condensation domain KM404_RS11545 PF00550 Phosphopantetheine attachment site KM404_RS11545 PF00975 Thioesterase domain KM404_RS11550 PF03621 MbtH-like protein KM404_RS11555 PF07690 Major Facilitator Superfamily KM404_RS11570 PF00216 Bacterial DNA-binding protein KM404_RS11580 PF05163 DinB family KM404_RS11585 PF00082 Subtilase family KM404_RS11590 PF01235 Sodium:alanine symporter family KM404_RS11605 PF16291 Domain of unknown function (DUF4937 KM404_RS11610 PF01479 S4 domain KM404_RS11610 PF00849 RNA pseudouridylate synthase KM404_RS11615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM404_RS11615 PF02824 TGS domain KM404_RS11615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM404_RS11615 PF03129 Anticodon binding domain KM404_RS11630 PF12146 Serine aminopeptidase, S33 KM404_RS11635 PF07690 Major Facilitator Superfamily KM404_RS11655 PF13649 Methyltransferase domain KM404_RS11700 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM404_RS11700 PF00753 Metallo-beta-lactamase superfamily KM404_RS11710 PF03176 MMPL family KM404_RS11720 PF00302 Chloramphenicol acetyltransferase KM404_RS11735 PF00583 Acetyltransferase (GNAT) family KM404_RS11765 PF01593 Flavin containing amine oxidoreductase KM404_RS11775 PF13302 Acetyltransferase (GNAT) domain KM404_RS11785 PF00313 'Cold-shock' DNA-binding domain KM404_RS11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS11845 PF03466 LysR substrate binding domain KM404_RS11850 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM404_RS11850 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM404_RS11865 PF03466 LysR substrate binding domain KM404_RS11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS11870 PF03475 3-alpha domain KM404_RS11870 PF03473 MOSC domain KM404_RS11885 PF00005 ABC transporter KM404_RS11885 PF00664 ABC transporter transmembrane region KM404_RS11890 PF00005 ABC transporter KM404_RS11890 PF00664 ABC transporter transmembrane region KM404_RS11905 PF01810 LysE type translocator KM404_RS11910 PF01381 Helix-turn-helix KM404_RS11910 PF07883 Cupin domain KM404_RS11935 PF00890 FAD binding domain KM404_RS11940 PF12680 SnoaL-like domain KM404_RS11940 PF04542 Sigma-70 region 2 KM404_RS11940 PF08281 Sigma-70, region 4 KM404_RS11965 PF02638 Glycosyl hydrolase-like 10 KM404_RS11975 PF02378 Phosphotransferase system, EIIC KM404_RS11985 PF03702 Anhydro-N-acetylmuramic acid kinase KM404_RS11990 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM404_RS11995 PF02660 Glycerol-3-phosphate acyltransferase KM404_RS12000 PF00266 Aminotransferase class-V KM404_RS12005 PF00291 Pyridoxal-phosphate dependent enzyme KM404_RS12020 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM404_RS12020 PF00753 Metallo-beta-lactamase superfamily KM404_RS12035 PF00270 DEAD/DEAH box helicase KM404_RS12035 PF00271 Helicase conserved C-terminal domain KM404_RS12050 PF00440 Bacterial regulatory proteins, tetR family KM404_RS12050 PF17932 Tetracyclin repressor-like, C-terminal domain KM404_RS12065 PF12704 MacB-like periplasmic core domain KM404_RS12065 PF00005 ABC transporter KM404_RS12065 PF02687 FtsX-like permease family KM404_RS12070 PF03848 Tellurite resistance protein TehB KM404_RS12070 PF09313 Domain of unknown function (DUF1971) KM404_RS12080 PF08241 Methyltransferase domain KM404_RS12085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM404_RS12085 PF00205 Thiamine pyrophosphate enzyme, central domain KM404_RS12085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM404_RS12090 PF12802 MarR family KM404_RS12095 PF00300 Histidine phosphatase superfamily (branch 1) KM404_RS12100 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM404_RS12130 PF07687 Peptidase dimerisation domain KM404_RS12130 PF01546 Peptidase family M20/M25/M40 KM404_RS12145 PF04542 Sigma-70 region 2 KM404_RS12145 PF08281 Sigma-70, region 4 KM404_RS12155 PF03717 Penicillin-binding Protein dimerisation domain KM404_RS12155 PF00905 Penicillin binding protein transpeptidase domain KM404_RS12170 PF01569 PAP2 superfamily KM404_RS12175 PF00356 Bacterial regulatory proteins, lacI family KM404_RS12180 PF07690 Major Facilitator Superfamily KM404_RS12185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM404_RS12185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM404_RS12190 PF00294 pfkB family carbohydrate kinase KM404_RS12195 PF00171 Aldehyde dehydrogenase family KM404_RS12200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM404_RS12200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM404_RS12200 PF00205 Thiamine pyrophosphate enzyme, central domain KM404_RS12205 PF01261 Xylose isomerase-like TIM barrel KM404_RS12210 PF01116 Fructose-bisphosphate aldolase class-II KM404_RS12215 PF04962 KduI/IolB family KM404_RS12240 PF18801 response regulator aspartate phosphatase H, N terminal KM404_RS12245 PF01381 Helix-turn-helix KM404_RS12260 PF02557 D-alanyl-D-alanine carboxypeptidase KM404_RS12270 PF00395 S-layer homology domain KM404_RS12270 PF01520 N-acetylmuramoyl-L-alanine amidase KM404_RS12280 PF00440 Bacterial regulatory proteins, tetR family KM404_RS12285 PF00005 ABC transporter KM404_RS12285 PF16326 ABC transporter C-terminal domain KM404_RS12295 PF00990 Diguanylate cyclase, GGDEF domain KM404_RS12295 PF00563 EAL domain KM404_RS12295 PF03707 Bacterial signalling protein N terminal repeat KM404_RS12300 PF13302 Acetyltransferase (GNAT) domain KM404_RS12315 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS12320 PF00581 Rhodanese-like domain KM404_RS12335 PF00005 ABC transporter KM404_RS12345 PF08359 YsiA-like protein, C-terminal region KM404_RS12345 PF00440 Bacterial regulatory proteins, tetR family KM404_RS12360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM404_RS12360 PF02770 Acyl-CoA dehydrogenase, middle domain KM404_RS12360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM404_RS12365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM404_RS12365 PF00289 Biotin carboxylase, N-terminal domain KM404_RS12365 PF02785 Biotin carboxylase C-terminal domain KM404_RS12370 PF00364 Biotin-requiring enzyme KM404_RS12375 PF00682 HMGL-like KM404_RS12380 PF00378 Enoyl-CoA hydratase/isomerase KM404_RS12385 PF01039 Carboxyl transferase domain KM404_RS12390 PF16177 Acetyl-coenzyme A synthetase N-terminus KM404_RS12390 PF00501 AMP-binding enzyme KM404_RS12390 PF13193 AMP-binding enzyme C-terminal domain KM404_RS12400 PF00583 Acetyltransferase (GNAT) family KM404_RS12405 PF00485 Phosphoribulokinase / Uridine kinase family KM404_RS12415 PF05163 DinB family KM404_RS12420 PF00768 D-alanyl-D-alanine carboxypeptidase KM404_RS12420 PF07943 Penicillin-binding protein 5, C-terminal domain KM404_RS12425 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS12425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS12430 PF00072 Response regulator receiver domain KM404_RS12430 PF00486 Transcriptional regulatory protein, C terminal KM404_RS12435 PF01966 HD domain KM404_RS12440 PF13021 Domain of unknown function (DUF3885) KM404_RS12445 PF01048 Phosphorylase superfamily KM404_RS12485 PF17760 UvrA interaction domain KM404_RS12485 PF17755 UvrA DNA-binding domain KM404_RS12485 PF17755 UvrA DNA-binding domain KM404_RS12485 PF17760 UvrA interaction domain KM404_RS12500 PF00144 Beta-lactamase KM404_RS12505 PF09278 MerR, DNA binding KM404_RS12505 PF00376 MerR family regulatory protein KM404_RS12510 PF07690 Major Facilitator Superfamily KM404_RS12530 PF01636 Phosphotransferase enzyme family KM404_RS12535 PF12833 Helix-turn-helix domain KM404_RS12550 PF00155 Aminotransferase class I and II KM404_RS12550 PF00392 Bacterial regulatory proteins, gntR family KM404_RS12565 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS12565 PF00107 Zinc-binding dehydrogenase KM404_RS12580 PF01225 Mur ligase family, catalytic domain KM404_RS12580 PF02875 Mur ligase family, glutamate ligase domain KM404_RS12580 PF08245 Mur ligase middle domain KM404_RS12585 PF01225 Mur ligase family, catalytic domain KM404_RS12585 PF02875 Mur ligase family, glutamate ligase domain KM404_RS12585 PF08245 Mur ligase middle domain KM404_RS12600 PF07486 Cell Wall Hydrolase KM404_RS12610 PF00486 Transcriptional regulatory protein, C terminal KM404_RS12610 PF00072 Response regulator receiver domain KM404_RS12625 PF12848 ABC transporter KM404_RS12625 PF00005 ABC transporter KM404_RS12640 PF00005 ABC transporter KM404_RS12665 PF00742 Homoserine dehydrogenase KM404_RS12665 PF01842 ACT domain KM404_RS12665 PF03447 Homoserine dehydrogenase, NAD binding domain KM404_RS12670 PF00392 Bacterial regulatory proteins, gntR family KM404_RS12670 PF00155 Aminotransferase class I and II KM404_RS12675 PF01820 D-ala D-ala ligase N-terminus KM404_RS12675 PF07478 D-ala D-ala ligase C-terminus KM404_RS12680 PF03070 TENA/THI-4/PQQC family KM404_RS12745 PF00067 Cytochrome P450 KM404_RS12755 PF00132 Bacterial transferase hexapeptide (six repeats) KM404_RS12760 PF07561 Domain of Unknown Function (DUF1540) KM404_RS12770 PF00067 Cytochrome P450 KM404_RS12790 PF03717 Penicillin-binding Protein dimerisation domain KM404_RS12790 PF00905 Penicillin binding protein transpeptidase domain KM404_RS12795 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM404_RS12800 PF01177 Asp/Glu/Hydantoin racemase KM404_RS12805 PF07155 ECF-type riboflavin transporter, S component KM404_RS12810 PF12558 ATP-binding cassette cobalt transporter KM404_RS12810 PF00005 ABC transporter KM404_RS12825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS12825 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS12835 PF04229 GrpB protein KM404_RS12840 PF00107 Zinc-binding dehydrogenase KM404_RS12840 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS12845 PF03793 PASTA domain KM404_RS12845 PF03717 Penicillin-binding Protein dimerisation domain KM404_RS12845 PF00905 Penicillin binding protein transpeptidase domain KM404_RS12855 PF11954 Domain of unknown function (DUF3471) KM404_RS12855 PF00144 Beta-lactamase KM404_RS12890 PF01965 DJ-1/PfpI family KM404_RS12905 PF00144 Beta-lactamase KM404_RS12920 PF07690 Major Facilitator Superfamily KM404_RS12935 PF03009 Glycerophosphoryl diester phosphodiesterase family KM404_RS12955 PF00892 EamA-like transporter family KM404_RS12960 PF01270 Glycosyl hydrolases family 8 KM404_RS12975 PF00293 NUDIX domain KM404_RS12985 PF00144 Beta-lactamase KM404_RS12995 PF07690 Major Facilitator Superfamily KM404_RS13010 PF00293 NUDIX domain KM404_RS13010 PF09297 NADH pyrophosphatase zinc ribbon domain KM404_RS13015 PF00712 DNA polymerase III beta subunit, N-terminal domain KM404_RS13015 PF02768 DNA polymerase III beta subunit, C-terminal domain KM404_RS13015 PF02767 DNA polymerase III beta subunit, central domain KM404_RS13020 PF00293 NUDIX domain KM404_RS13035 PF12706 Beta-lactamase superfamily domain KM404_RS13055 PF09234 Domain of unknown function (DUF1963) KM404_RS13085 PF08000 Bacterial PH domain KM404_RS13095 PF12867 DinB superfamily KM404_RS13110 PF02673 Bacitracin resistance protein BacA KM404_RS13120 PF01541 GIY-YIG catalytic domain KM404_RS13160 PF01266 FAD dependent oxidoreductase KM404_RS13185 PF13419 Haloacid dehalogenase-like hydrolase KM404_RS13205 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM404_RS13210 PF00550 Phosphopantetheine attachment site KM404_RS13210 PF00501 AMP-binding enzyme KM404_RS13210 PF13193 AMP-binding enzyme C-terminal domain KM404_RS13210 PF00668 Condensation domain KM404_RS13220 PF00128 Alpha amylase, catalytic domain KM404_RS13220 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM404_RS13220 PF03714 Bacterial pullanase-associated domain KM404_RS13225 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM404_RS13225 PF01447 Thermolysin metallopeptidase, catalytic domain KM404_RS13225 PF03413 Peptidase propeptide and YPEB domain KM404_RS13225 PF07504 Fungalysin/Thermolysin Propeptide Motif KM404_RS13245 PF00344 SecY translocase KM404_RS13250 PF00308 Bacterial dnaA protein KM404_RS13250 PF11638 DnaA N-terminal domain KM404_RS13250 PF08299 Bacterial dnaA protein helix-turn-helix KM404_RS13255 PF00892 EamA-like transporter family KM404_RS13260 PF00155 Aminotransferase class I and II KM404_RS13260 PF00392 Bacterial regulatory proteins, gntR family KM404_RS13265 PF00561 alpha/beta hydrolase fold KM404_RS13290 PF06081 Aromatic acid exporter family member 1 KM404_RS13305 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM404_RS13310 PF03413 Peptidase propeptide and YPEB domain KM404_RS13310 PF14620 YpeB sporulation KM404_RS13315 PF01471 Putative peptidoglycan binding domain KM404_RS13315 PF07486 Cell Wall Hydrolase KM404_RS13330 PF03301 Tryptophan 2,3-dioxygenase KM404_RS13335 PF04199 Putative cyclase KM404_RS13340 PF00266 Aminotransferase class-V KM404_RS13345 PF00440 Bacterial regulatory proteins, tetR family KM404_RS13345 PF08359 YsiA-like protein, C-terminal region KM404_RS13350 PF13344 Haloacid dehalogenase-like hydrolase KM404_RS13350 PF00293 NUDIX domain KM404_RS13375 PF01590 GAF domain KM404_RS13375 PF00158 Sigma-54 interaction domain KM404_RS13375 PF02954 Bacterial regulatory protein, Fis family KM404_RS13390 PF13302 Acetyltransferase (GNAT) domain KM404_RS13395 PF08220 DeoR-like helix-turn-helix domain KM404_RS13395 PF00455 DeoR C terminal sensor domain KM404_RS13410 PF00403 Heavy-metal-associated domain KM404_RS13410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM404_RS13410 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS13415 PF02082 Transcriptional regulator KM404_RS13430 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS13430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM404_RS13435 PF00364 Biotin-requiring enzyme KM404_RS13435 PF02817 e3 binding domain KM404_RS13435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM404_RS13440 PF02780 Transketolase, C-terminal domain KM404_RS13440 PF02779 Transketolase, pyrimidine binding domain KM404_RS13445 PF00676 Dehydrogenase E1 component KM404_RS13455 PF00106 short chain dehydrogenase KM404_RS13460 PF13673 Acetyltransferase (GNAT) domain KM404_RS13460 PF04229 GrpB protein KM404_RS13490 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS13495 PF00571 CBS domain KM404_RS13495 PF00005 ABC transporter KM404_RS13500 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM404_RS13505 PF00574 Clp protease KM404_RS13520 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM404_RS13525 PF13673 Acetyltransferase (GNAT) domain KM404_RS13530 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM404_RS13530 PF18416 N-acetylglucosamine binding protein domain 2 KM404_RS13545 PF10990 Protein of unknown function (DUF2809) KM404_RS13570 PF03772 Competence protein KM404_RS13570 PF00753 Metallo-beta-lactamase superfamily KM404_RS13570 PF13567 Domain of unknown function (DUF4131) KM404_RS13620 PF13538 UvrD-like helicase C-terminal domain KM404_RS13635 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM404_RS13640 PF00271 Helicase conserved C-terminal domain KM404_RS13640 PF00270 DEAD/DEAH box helicase KM404_RS13640 PF09382 RQC domain KM404_RS13640 PF16124 RecQ zinc-binding KM404_RS13640 PF00570 HRDC domain KM404_RS13680 PF02833 DHHA2 domain KM404_RS13680 PF01368 DHH family KM404_RS13685 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM404_RS13685 PF18416 N-acetylglucosamine binding protein domain 2 KM404_RS13700 PF02627 Carboxymuconolactone decarboxylase family KM404_RS13705 PF01235 Sodium:alanine symporter family KM404_RS13710 PF00171 Aldehyde dehydrogenase family KM404_RS13715 PF00701 Dihydrodipicolinate synthetase family KM404_RS13720 PF05544 Proline racemase KM404_RS13725 PF05544 Proline racemase KM404_RS13730 PF01266 FAD dependent oxidoreductase KM404_RS13735 PF00158 Sigma-54 interaction domain KM404_RS13735 PF13188 PAS domain KM404_RS13735 PF02954 Bacterial regulatory protein, Fis family KM404_RS13750 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS13750 PF04324 BFD-like [2Fe-2S] binding domain KM404_RS13765 PF08876 Domain of unknown function (DUF1836) KM404_RS13770 PF09335 SNARE associated Golgi protein KM404_RS13785 PF04914 DltD protein KM404_RS13790 PF00958 GMP synthase C terminal domain KM404_RS13790 PF13673 Acetyltransferase (GNAT) domain KM404_RS13790 PF13302 Acetyltransferase (GNAT) domain KM404_RS13790 PF00117 Glutamine amidotransferase class-I KM404_RS13790 PF03352 Methyladenine glycosylase KM404_RS13795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS13800 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM404_RS13800 PF00877 NlpC/P60 family KM404_RS13805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM404_RS13805 PF13378 Enolase C-terminal domain-like KM404_RS13825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM404_RS13850 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM404_RS13850 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM404_RS13855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS13855 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS13855 PF16736 Single Cache-like KM404_RS13855 PF00989 PAS fold KM404_RS13880 PF01048 Phosphorylase superfamily KM404_RS13890 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM404_RS13905 PF02645 Uncharacterised protein, DegV family COG1307 KM404_RS13925 PF07690 Major Facilitator Superfamily KM404_RS13935 PF04519 Polymer-forming cytoskeletal KM404_RS13940 PF13171 Protein of unknown function (DUF4004) KM404_RS13945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS13945 PF12793 Sugar transport-related sRNA regulator N-term KM404_RS13950 PF07690 Major Facilitator Superfamily KM404_RS13970 PF04226 Transglycosylase associated protein KM404_RS13975 PF01156 Inosine-uridine preferring nucleoside hydrolase KM404_RS13985 PF08241 Methyltransferase domain KM404_RS14020 PF00155 Aminotransferase class I and II KM404_RS14025 PF07977 FabA-like domain KM404_RS14030 PF03630 Fumble KM404_RS14050 PF00005 ABC transporter KM404_RS14095 PF01594 AI-2E family transporter KM404_RS14110 PF00296 Luciferase-like monooxygenase KM404_RS14115 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS14120 PF09084 NMT1/THI5 like KM404_RS14125 PF00005 ABC transporter KM404_RS14145 PF09297 NADH pyrophosphatase zinc ribbon domain KM404_RS14145 PF00293 NUDIX domain KM404_RS14165 PF02522 Aminoglycoside 3-N-acetyltransferase KM404_RS14190 PF13536 Putative multidrug resistance efflux transporter KM404_RS14195 PF12867 DinB superfamily KM404_RS14215 PF08713 DNA alkylation repair enzyme KM404_RS14225 PF01522 Polysaccharide deacetylase KM404_RS14235 PF03741 Integral membrane protein TerC family KM404_RS14240 PF00884 Sulfatase KM404_RS14245 PF12848 ABC transporter KM404_RS14245 PF00005 ABC transporter KM404_RS14260 PF00440 Bacterial regulatory proteins, tetR family KM404_RS14260 PF16295 Tetracyclin repressor-like, C-terminal domain KM404_RS14270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM404_RS14275 PF02153 Prephenate dehydrogenase KM404_RS14275 PF01842 ACT domain KM404_RS14280 PF00155 Aminotransferase class I and II KM404_RS14285 PF01264 Chorismate synthase KM404_RS14290 PF01817 Chorismate mutase type II KM404_RS14290 PF00793 DAHP synthetase I family KM404_RS14310 PF01636 Phosphotransferase enzyme family KM404_RS14325 PF06725 3D domain KM404_RS14325 PF01476 LysM domain KM404_RS14335 PF08281 Sigma-70, region 4 KM404_RS14335 PF04542 Sigma-70 region 2 KM404_RS14355 PF06039 Malate:quinone oxidoreductase (Mqo) KM404_RS14360 PF13407 Periplasmic binding protein domain KM404_RS14365 PF02653 Branched-chain amino acid transport system / permease component KM404_RS14370 PF02653 Branched-chain amino acid transport system / permease component KM404_RS14380 PF00325 Bacterial regulatory proteins, crp family KM404_RS14380 PF04198 Putative sugar-binding domain KM404_RS14385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM404_RS14385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM404_RS14395 PF01791 DeoC/LacD family aldolase KM404_RS14415 PF03992 Antibiotic biosynthesis monooxygenase KM404_RS14435 PF07662 Na+ dependent nucleoside transporter C-terminus KM404_RS14435 PF01773 Na+ dependent nucleoside transporter N-terminus KM404_RS14440 PF00171 Aldehyde dehydrogenase family KM404_RS14445 PF00696 Amino acid kinase family KM404_RS14445 PF01472 PUA domain KM404_RS14450 PF03807 NADP oxidoreductase coenzyme F420-dependent KM404_RS14450 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM404_RS14455 PF01546 Peptidase family M20/M25/M40 KM404_RS14460 PF09339 IclR helix-turn-helix domain KM404_RS14460 PF01614 Bacterial transcriptional regulator KM404_RS14465 PF00324 Amino acid permease KM404_RS14470 PF01139 tRNA-splicing ligase RtcB KM404_RS14480 PF00245 Alkaline phosphatase KM404_RS14485 PF11188 Protein of unknown function (DUF2975) KM404_RS14490 PF13443 Cro/C1-type HTH DNA-binding domain KM404_RS14505 PF10086 YhfC intramembrane metalloprotease KM404_RS14515 PF00072 Response regulator receiver domain KM404_RS14515 PF04397 LytTr DNA-binding domain KM404_RS14525 PF13302 Acetyltransferase (GNAT) domain KM404_RS14530 PF12681 Glyoxalase-like domain KM404_RS14550 PF17863 AAA lid domain KM404_RS14550 PF07726 ATPase family associated with various cellular activities (AAA) KM404_RS14565 PF07690 Major Facilitator Superfamily KM404_RS14575 PF00535 Glycosyl transferase family 2 KM404_RS14595 PF00535 Glycosyl transferase family 2 KM404_RS14605 PF00202 Aminotransferase class-III KM404_RS14610 PF00199 Catalase KM404_RS14610 PF06628 Catalase-related immune-responsive KM404_RS14620 PF13382 Adenine deaminase C-terminal domain KM404_RS14620 PF01979 Amidohydrolase family KM404_RS14625 PF00144 Beta-lactamase KM404_RS14645 PF07726 ATPase family associated with various cellular activities (AAA) KM404_RS14645 PF17863 AAA lid domain KM404_RS14655 PF00881 Nitroreductase family KM404_RS14660 PF01047 MarR family KM404_RS14665 PF03764 Elongation factor G, domain IV KM404_RS14665 PF00679 Elongation factor G C-terminus KM404_RS14665 PF14492 Elongation Factor G, domain II KM404_RS14665 PF00009 Elongation factor Tu GTP binding domain KM404_RS14675 PF00293 NUDIX domain KM404_RS14690 PF00005 ABC transporter KM404_RS14695 PF00392 Bacterial regulatory proteins, gntR family KM404_RS14705 PF12704 MacB-like periplasmic core domain KM404_RS14705 PF02687 FtsX-like permease family KM404_RS14705 PF00005 ABC transporter KM404_RS14730 PF12833 Helix-turn-helix domain KM404_RS14735 PF00583 Acetyltransferase (GNAT) family KM404_RS14750 PF00892 EamA-like transporter family KM404_RS14755 PF00392 Bacterial regulatory proteins, gntR family KM404_RS14755 PF00155 Aminotransferase class I and II KM404_RS14760 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM404_RS14765 PF13031 Protein of unknown function (DUF3892) KM404_RS14775 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS14775 PF00672 HAMP domain KM404_RS14780 PF00072 Response regulator receiver domain KM404_RS14780 PF00486 Transcriptional regulatory protein, C terminal KM404_RS14785 PF00561 alpha/beta hydrolase fold KM404_RS14815 PF01925 Sulfite exporter TauE/SafE KM404_RS14820 PF13302 Acetyltransferase (GNAT) domain KM404_RS14825 PF00324 Amino acid permease KM404_RS14835 PF08713 DNA alkylation repair enzyme KM404_RS14840 PF10898 Protein of unknown function (DUF2716) KM404_RS14870 PF10502 Signal peptidase, peptidase S26 KM404_RS14875 PF03717 Penicillin-binding Protein dimerisation domain KM404_RS14875 PF00905 Penicillin binding protein transpeptidase domain KM404_RS14885 PF02146 Sir2 family KM404_RS14890 PF01470 Pyroglutamyl peptidase KM404_RS14910 PF03746 LamB/YcsF family KM404_RS14920 PF02682 Carboxyltransferase domain, subdomain C and D KM404_RS14925 PF09339 IclR helix-turn-helix domain KM404_RS14925 PF01614 Bacterial transcriptional regulator KM404_RS14930 PF10502 Signal peptidase, peptidase S26 KM404_RS14935 PF03932 CutC family KM404_RS14940 PF07454 Stage II sporulation protein P (SpoIIP) KM404_RS14955 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM404_RS14955 PF02770 Acyl-CoA dehydrogenase, middle domain KM404_RS14955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM404_RS14970 PF07670 Nucleoside recognition KM404_RS14985 PF02915 Rubrerythrin KM404_RS14995 PF00440 Bacterial regulatory proteins, tetR family KM404_RS15000 PF00391 PEP-utilising enzyme, mobile domain KM404_RS15000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM404_RS15005 PF00753 Metallo-beta-lactamase superfamily KM404_RS15020 PF07875 Coat F domain KM404_RS15025 PF08892 YqcI/YcgG family KM404_RS15030 PF01810 LysE type translocator KM404_RS15045 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM404_RS15050 PF10710 Protein of unknown function (DUF2512) KM404_RS15055 PF11553 Protein of unknown function (DUF3231) KM404_RS15060 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM404_RS15065 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS15065 PF13823 Alcohol dehydrogenase GroES-associated KM404_RS15065 PF00107 Zinc-binding dehydrogenase KM404_RS15080 PF00206 Lyase KM404_RS15080 PF10415 Fumarase C C-terminus KM404_RS15085 PF17763 Glutaminase/Asparaginase C-terminal domain KM404_RS15085 PF00710 Asparaginase, N-terminal KM404_RS15090 PF01381 Helix-turn-helix KM404_RS15100 PF01541 GIY-YIG catalytic domain KM404_RS15100 PF12826 Helix-hairpin-helix motif KM404_RS15100 PF02151 UvrB/uvrC motif KM404_RS15100 PF08459 UvrC Helix-hairpin-helix N-terminal KM404_RS15105 PF13520 Amino acid permease KM404_RS15110 PF05525 Branched-chain amino acid transport protein KM404_RS15115 PF03807 NADP oxidoreductase coenzyme F420-dependent KM404_RS15115 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM404_RS15120 PF13564 DoxX-like family KM404_RS15125 PF03949 Malic enzyme, NAD binding domain KM404_RS15125 PF00390 Malic enzyme, N-terminal domain KM404_RS15140 PF03845 Spore germination protein KM404_RS15150 PF00072 Response regulator receiver domain KM404_RS15150 PF08664 YcbB domain KM404_RS15160 PF04960 Glutaminase KM404_RS15165 PF01235 Sodium:alanine symporter family KM404_RS15195 PF02872 5'-nucleotidase, C-terminal domain KM404_RS15195 PF00149 Calcineurin-like phosphoesterase KM404_RS15195 PF17936 Bacterial Ig domain KM404_RS15200 PF00199 Catalase KM404_RS15200 PF06628 Catalase-related immune-responsive KM404_RS15205 PF00561 alpha/beta hydrolase fold KM404_RS15210 PF00857 Isochorismatase family KM404_RS15230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS15230 PF03466 LysR substrate binding domain KM404_RS15255 PF11181 Heat induced stress protein YflT KM404_RS15275 PF03073 TspO/MBR family KM404_RS15280 PF00875 DNA photolyase KM404_RS15280 PF03441 FAD binding domain of DNA photolyase KM404_RS15290 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM404_RS15295 PF00361 Proton-conducting membrane transporter KM404_RS15295 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM404_RS15300 PF10057 Uncharacterized conserved protein (DUF2294) KM404_RS15315 PF01040 UbiA prenyltransferase family KM404_RS15320 PF00561 alpha/beta hydrolase fold KM404_RS15325 PF01297 Zinc-uptake complex component A periplasmic KM404_RS15330 PF00950 ABC 3 transport family KM404_RS15335 PF00005 ABC transporter KM404_RS15360 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM404_RS15365 PF01758 Sodium Bile acid symporter family KM404_RS15370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS15375 PF01022 Bacterial regulatory protein, arsR family KM404_RS15390 PF00012 Hsp70 protein KM404_RS15405 PF01037 Lrp/AsnC ligand binding domain KM404_RS15420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS15440 PF02805 Metal binding domain of Ada KM404_RS15440 PF12833 Helix-turn-helix domain KM404_RS15445 PF02805 Metal binding domain of Ada KM404_RS15445 PF12833 Helix-turn-helix domain KM404_RS15455 PF00144 Beta-lactamase KM404_RS15480 PF12802 MarR family KM404_RS15485 PF00667 FAD binding domain KM404_RS15485 PF00258 Flavodoxin KM404_RS15485 PF00175 Oxidoreductase NAD-binding domain KM404_RS15485 PF00067 Cytochrome P450 KM404_RS15490 PF07690 Major Facilitator Superfamily KM404_RS15515 PF00486 Transcriptional regulatory protein, C terminal KM404_RS15515 PF00072 Response regulator receiver domain KM404_RS15520 PF00672 HAMP domain KM404_RS15520 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS15520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS15545 PF00291 Pyridoxal-phosphate dependent enzyme KM404_RS15565 PF01381 Helix-turn-helix KM404_RS15580 PF00753 Metallo-beta-lactamase superfamily KM404_RS15585 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM404_RS15595 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM404_RS15595 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM404_RS15600 PF04072 Leucine carboxyl methyltransferase KM404_RS15615 PF00005 ABC transporter KM404_RS15620 PF02687 FtsX-like permease family KM404_RS15635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS15635 PF00672 HAMP domain KM404_RS15635 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS15640 PF00486 Transcriptional regulatory protein, C terminal KM404_RS15640 PF00072 Response regulator receiver domain KM404_RS15650 PF01047 MarR family KM404_RS15660 PF04299 Putative FMN-binding domain KM404_RS15665 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM404_RS15665 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS15670 PF07690 Major Facilitator Superfamily KM404_RS15675 PF02589 LUD domain KM404_RS15680 PF11870 Domain of unknown function (DUF3390) KM404_RS15680 PF02589 LUD domain KM404_RS15680 PF13183 4Fe-4S dicluster domain KM404_RS15685 PF02754 Cysteine-rich domain KM404_RS15690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS15690 PF03466 LysR substrate binding domain KM404_RS15700 PF17676 LD-carboxypeptidase C-terminal domain KM404_RS15700 PF02016 LD-carboxypeptidase N-terminal domain KM404_RS15720 PF07690 Major Facilitator Superfamily KM404_RS15725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM404_RS15725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM404_RS15730 PF05116 Sucrose-6F-phosphate phosphohydrolase KM404_RS15740 PF00356 Bacterial regulatory proteins, lacI family KM404_RS15745 PF18801 response regulator aspartate phosphatase H, N terminal KM404_RS15765 PF00817 impB/mucB/samB family KM404_RS15765 PF11799 impB/mucB/samB family C-terminal domain KM404_RS15765 PF11798 IMS family HHH motif KM404_RS15780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS15780 PF02743 Cache domain KM404_RS15780 PF00672 HAMP domain KM404_RS15795 PF01554 MatE KM404_RS15805 PF18496 Collagenase G catalytic helper subdomain KM404_RS15805 PF01752 Collagenase KM404_RS15805 PF08453 Peptidase family M9 N-terminal KM404_RS15815 PF07690 Major Facilitator Superfamily KM404_RS15820 PF16859 Tetracyclin repressor-like, C-terminal domain KM404_RS15820 PF00440 Bacterial regulatory proteins, tetR family KM404_RS15830 PF01022 Bacterial regulatory protein, arsR family KM404_RS15840 PF03313 Serine dehydratase alpha chain KM404_RS15845 PF01842 ACT domain KM404_RS15845 PF03315 Serine dehydratase beta chain KM404_RS15855 PF00202 Aminotransferase class-III KM404_RS15860 PF07503 HypF finger KM404_RS15860 PF00708 Acylphosphatase KM404_RS15860 PF01300 Telomere recombination KM404_RS15860 PF17788 HypF Kae1-like domain KM404_RS15865 PF02769 AIR synthase related protein, C-terminal domain KM404_RS15865 PF00586 AIR synthase related protein, N-terminal domain KM404_RS15870 PF00857 Isochorismatase family KM404_RS15875 PF01037 Lrp/AsnC ligand binding domain KM404_RS15880 PF13520 Amino acid permease KM404_RS15900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM404_RS15900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM404_RS15900 PF01842 ACT domain KM404_RS15905 PF00266 Aminotransferase class-V KM404_RS15920 PF08281 Sigma-70, region 4 KM404_RS15920 PF04542 Sigma-70 region 2 KM404_RS15935 PF07883 Cupin domain KM404_RS15940 PF12833 Helix-turn-helix domain KM404_RS15940 PF01497 Periplasmic binding protein KM404_RS15945 PF01804 Penicillin amidase KM404_RS15985 PF14044 NETI protein KM404_RS15990 PF07690 Major Facilitator Superfamily KM404_RS15995 PF12697 Alpha/beta hydrolase family KM404_RS16000 PF01047 MarR family KM404_RS16005 PF07690 Major Facilitator Superfamily KM404_RS16015 PF12679 ABC-2 family transporter protein KM404_RS16020 PF00005 ABC transporter KM404_RS16020 PF13732 Domain of unknown function (DUF4162) KM404_RS16025 PF13396 Phospholipase_D-nuclease N-terminal KM404_RS16035 PF17314 Family of unknown function (DUF5360) KM404_RS16040 PF00893 Small Multidrug Resistance protein KM404_RS16045 PF00440 Bacterial regulatory proteins, tetR family KM404_RS16050 PF01289 Thiol-activated cytolysin KM404_RS16050 PF17440 Thiol-activated cytolysin beta sandwich domain KM404_RS16055 PF02667 Short chain fatty acid transporter KM404_RS16065 PF02525 Flavodoxin-like fold KM404_RS16085 PF14256 YwiC-like protein KM404_RS16095 PF00005 ABC transporter KM404_RS16100 PF02361 Cobalt transport protein KM404_RS16115 PF03737 Aldolase/RraA KM404_RS16120 PF03606 C4-dicarboxylate anaerobic carrier KM404_RS16125 PF04231 Endonuclease I KM404_RS16140 PF01381 Helix-turn-helix KM404_RS16145 PF02660 Glycerol-3-phosphate acyltransferase KM404_RS16150 PF04073 Aminoacyl-tRNA editing domain KM404_RS16155 PF03129 Anticodon binding domain KM404_RS16155 PF13393 Histidyl-tRNA synthetase KM404_RS16170 PF01638 HxlR-like helix-turn-helix KM404_RS16175 PF00881 Nitroreductase family KM404_RS16185 PF02887 Pyruvate kinase, alpha/beta domain KM404_RS16185 PF00391 PEP-utilising enzyme, mobile domain KM404_RS16185 PF00224 Pyruvate kinase, barrel domain KM404_RS16205 PF00005 ABC transporter KM404_RS16230 PF13419 Haloacid dehalogenase-like hydrolase KM404_RS16240 PF13350 Tyrosine phosphatase family KM404_RS16265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS16270 PF00480 ROK family KM404_RS16275 PF07690 Major Facilitator Superfamily KM404_RS16280 PF12464 Maltose acetyltransferase KM404_RS16280 PF14602 Hexapeptide repeat of succinyl-transferase KM404_RS16290 PF00005 ABC transporter KM404_RS16290 PF02687 FtsX-like permease family KM404_RS16290 PF12704 MacB-like periplasmic core domain KM404_RS16300 PF00579 tRNA synthetases class I (W and Y) KM404_RS16305 PF13288 DXP reductoisomerase C-terminal domain KM404_RS16305 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM404_RS16305 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM404_RS16310 PF01594 AI-2E family transporter KM404_RS16330 PF08241 Methyltransferase domain KM404_RS16340 PF07690 Major Facilitator Superfamily KM404_RS16360 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS16370 PF00571 CBS domain KM404_RS16370 PF01595 Cyclin M transmembrane N-terminal domain KM404_RS16370 PF03471 Transporter associated domain KM404_RS16375 PF13411 MerR HTH family regulatory protein KM404_RS16380 PF00892 EamA-like transporter family KM404_RS16385 PF00805 Pentapeptide repeats (8 copies) KM404_RS16390 PF06906 Protein of unknown function (DUF1272) KM404_RS16395 PF10282 Lactonase, 7-bladed beta-propeller KM404_RS16400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM404_RS16400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM404_RS16405 PF02447 GntP family permease KM404_RS16410 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM404_RS16415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM404_RS16415 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM404_RS16420 PF02779 Transketolase, pyrimidine binding domain KM404_RS16420 PF00456 Transketolase, thiamine diphosphate binding domain KM404_RS16420 PF02780 Transketolase, C-terminal domain KM404_RS16425 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM404_RS16425 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM404_RS16430 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM404_RS16430 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM404_RS16435 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS16435 PF00107 Zinc-binding dehydrogenase KM404_RS16440 PF00296 Luciferase-like monooxygenase KM404_RS16450 PF00698 Acyl transferase domain KM404_RS16450 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS16450 PF16197 Ketoacyl-synthetase C-terminal extension KM404_RS16450 PF00109 Beta-ketoacyl synthase, N-terminal domain KM404_RS16450 PF08659 KR domain KM404_RS16450 PF00550 Phosphopantetheine attachment site KM404_RS16450 PF02801 Beta-ketoacyl synthase, C-terminal domain KM404_RS16450 PF14765 Polyketide synthase dehydratase KM404_RS16455 PF00106 short chain dehydrogenase KM404_RS16460 PF01447 Thermolysin metallopeptidase, catalytic domain KM404_RS16460 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM404_RS16460 PF07504 Fungalysin/Thermolysin Propeptide Motif KM404_RS16460 PF03413 Peptidase propeptide and YPEB domain KM404_RS16480 PF00248 Aldo/keto reductase family KM404_RS16485 PF07690 Major Facilitator Superfamily KM404_RS16495 PF03928 Haem-degrading KM404_RS16500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS16530 PF03960 ArsC family KM404_RS16535 PF01638 HxlR-like helix-turn-helix KM404_RS16540 PF00392 Bacterial regulatory proteins, gntR family KM404_RS16540 PF07702 UTRA domain KM404_RS16555 PF01638 HxlR-like helix-turn-helix KM404_RS16560 PF01638 HxlR-like helix-turn-helix KM404_RS16565 PF00248 Aldo/keto reductase family KM404_RS16595 PF02567 Phenazine biosynthesis-like protein KM404_RS16615 PF00501 AMP-binding enzyme KM404_RS16615 PF13193 AMP-binding enzyme C-terminal domain KM404_RS16625 PF01638 HxlR-like helix-turn-helix KM404_RS16640 PF01022 Bacterial regulatory protein, arsR family KM404_RS16650 PF12791 Anti-sigma factor N-terminus KM404_RS16655 PF04542 Sigma-70 region 2 KM404_RS16670 PF00440 Bacterial regulatory proteins, tetR family KM404_RS16690 PF05656 Protein of unknown function (DUF805) KM404_RS16695 PF01061 ABC-2 type transporter KM404_RS16700 PF13732 Domain of unknown function (DUF4162) KM404_RS16700 PF00005 ABC transporter KM404_RS16715 PF03063 Prismane/CO dehydrogenase family KM404_RS16725 PF00753 Metallo-beta-lactamase superfamily KM404_RS16730 PF01183 Glycosyl hydrolases family 25 KM404_RS16730 PF01471 Putative peptidoglycan binding domain KM404_RS16755 PF00144 Beta-lactamase KM404_RS16795 PF00753 Metallo-beta-lactamase superfamily KM404_RS16800 PF00107 Zinc-binding dehydrogenase KM404_RS16800 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS16805 PF00324 Amino acid permease KM404_RS16810 PF07690 Major Facilitator Superfamily KM404_RS16835 PF02585 GlcNAc-PI de-N-acetylase KM404_RS16840 PF08830 Protein of unknown function (DUF1806) KM404_RS16845 PF03600 Citrate transporter KM404_RS16870 PF01032 FecCD transport family KM404_RS16875 PF01032 FecCD transport family KM404_RS16880 PF05675 Protein of unknown function (DUF817) KM404_RS16885 PF02567 Phenazine biosynthesis-like protein KM404_RS16890 PF13170 Protein of unknown function (DUF4003) KM404_RS16905 PF10901 Protein of unknown function (DUF2690) KM404_RS16915 PF03466 LysR substrate binding domain KM404_RS16915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS16920 PF00107 Zinc-binding dehydrogenase KM404_RS16920 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS16935 PF00488 MutS domain V KM404_RS16935 PF01713 Smr domain KM404_RS16945 PF09154 Domain of unknown function (DUF1939) KM404_RS16945 PF00128 Alpha amylase, catalytic domain KM404_RS16960 PF00144 Beta-lactamase KM404_RS16970 PF07690 Major Facilitator Superfamily KM404_RS16975 PF03466 LysR substrate binding domain KM404_RS16975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS16990 PF03009 Glycerophosphoryl diester phosphodiesterase family KM404_RS17010 PF01494 FAD binding domain KM404_RS17015 PF01022 Bacterial regulatory protein, arsR family KM404_RS17020 PF00107 Zinc-binding dehydrogenase KM404_RS17020 PF08240 Alcohol dehydrogenase GroES-like domain KM404_RS17025 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM404_RS17040 PF04299 Putative FMN-binding domain KM404_RS17045 PF04229 GrpB protein KM404_RS17055 PF01758 Sodium Bile acid symporter family KM404_RS17060 PF01565 FAD binding domain KM404_RS17060 PF02913 FAD linked oxidases, C-terminal domain KM404_RS17080 PF00132 Bacterial transferase hexapeptide (six repeats) KM404_RS17085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM404_RS17090 PF00535 Glycosyl transferase family 2 KM404_RS17095 PF00378 Enoyl-CoA hydratase/isomerase KM404_RS17100 PF01752 Collagenase KM404_RS17100 PF18496 Collagenase G catalytic helper subdomain KM404_RS17100 PF08453 Peptidase family M9 N-terminal KM404_RS17105 PF02308 MgtC family KM404_RS17120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS17125 PF04294 VanW like protein KM404_RS17135 PF13039 Protein of unknown function (DUF3900) KM404_RS17135 PF13037 Domain of unknown function (DUF3898) KM404_RS17155 PF00313 'Cold-shock' DNA-binding domain KM404_RS17165 PF00258 Flavodoxin KM404_RS17175 PF00293 NUDIX domain KM404_RS17185 PF00132 Bacterial transferase hexapeptide (six repeats) KM404_RS17195 PF00106 short chain dehydrogenase KM404_RS17205 PF00206 Lyase KM404_RS17205 PF14698 Argininosuccinate lyase C-terminal KM404_RS17215 PF01156 Inosine-uridine preferring nucleoside hydrolase KM404_RS17220 PF00474 Sodium:solute symporter family KM404_RS17230 PF00171 Aldehyde dehydrogenase family KM404_RS17240 PF14151 YfhD-like protein KM404_RS17245 PF13249 Squalene-hopene cyclase N-terminal domain KM404_RS17245 PF13243 Squalene-hopene cyclase C-terminal domain KM404_RS17250 PF02681 Divergent PAP2 family KM404_RS17255 PF00892 EamA-like transporter family KM404_RS17260 PF06961 Protein of unknown function (DUF1294) KM404_RS17275 PF10609 NUBPL iron-transfer P-loop NTPase KM404_RS17285 PF02391 MoaE protein KM404_RS17290 PF00994 Probable molybdopterin binding domain KM404_RS17290 PF03453 MoeA N-terminal region (domain I and II) KM404_RS17290 PF03454 MoeA C-terminal region (domain IV) KM404_RS17295 PF00899 ThiF family KM404_RS17300 PF01226 Formate/nitrite transporter KM404_RS17305 PF06463 Molybdenum Cofactor Synthesis C KM404_RS17305 PF04055 Radical SAM superfamily KM404_RS17310 PF02634 FdhD/NarQ family KM404_RS17315 PF10057 Uncharacterized conserved protein (DUF2294) KM404_RS17320 PF07849 Protein of unknown function (DUF1641) KM404_RS17325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM404_RS17325 PF01568 Molydopterin dinucleotide binding domain KM404_RS17325 PF00384 Molybdopterin oxidoreductase KM404_RS17325 PF00037 4Fe-4S binding domain KM404_RS17325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM404_RS17335 PF03323 Bacillus/Clostridium GerA spore germination protein KM404_RS17375 PF08241 Methyltransferase domain KM404_RS17380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS17385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS17390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS17395 PF00375 Sodium:dicarboxylate symporter family KM404_RS17400 PF03816 Cell envelope-related transcriptional attenuator domain KM404_RS17410 PF08281 Sigma-70, region 4 KM404_RS17410 PF04542 Sigma-70 region 2 KM404_RS17430 PF00005 ABC transporter KM404_RS17430 PF13732 Domain of unknown function (DUF4162) KM404_RS17440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM404_RS17440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM404_RS17445 PF00521 DNA gyrase/topoisomerase IV, subunit A KM404_RS17445 PF03989 DNA gyrase C-terminal domain, beta-propeller KM404_RS17450 PF01751 Toprim domain KM404_RS17450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS17450 PF00204 DNA gyrase B KM404_RS17450 PF00986 DNA gyrase B subunit, carboxyl terminus KM404_RS17455 PF13380 CoA binding domain KM404_RS17460 PF13180 PDZ domain KM404_RS17465 PF00072 Response regulator receiver domain KM404_RS17465 PF00486 Transcriptional regulatory protein, C terminal KM404_RS17475 PF03477 ATP cone domain KM404_RS17475 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM404_RS17480 PF02660 Glycerol-3-phosphate acyltransferase KM404_RS17485 PF01521 Iron-sulphur cluster biosynthesis KM404_RS17490 PF03061 Thioesterase superfamily KM404_RS17495 PF00704 Glycosyl hydrolases family 18 KM404_RS17495 PF01476 LysM domain KM404_RS17505 PF08177 Small acid-soluble spore protein N family KM404_RS17510 PF13040 Fur-regulated basic protein B KM404_RS17515 PF01336 OB-fold nucleic acid binding domain KM404_RS17515 PF00929 Exonuclease KM404_RS17515 PF02811 PHP domain KM404_RS17515 PF14579 Helix-hairpin-helix motif KM404_RS17515 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM404_RS17515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM404_RS17515 PF11490 DNA polymerase III polC-type N-terminus II KM404_RS17520 PF00578 AhpC/TSA family KM404_RS17530 PF03412 Peptidase C39 family KM404_RS17530 PF00664 ABC transporter transmembrane region KM404_RS17530 PF00005 ABC transporter KM404_RS17535 PF00694 Aconitase C-terminal domain KM404_RS17535 PF00330 Aconitase family (aconitate hydratase) KM404_RS17545 PF01522 Polysaccharide deacetylase KM404_RS17575 PF02272 DHHA1 domain KM404_RS17575 PF01411 tRNA synthetases class II (A) KM404_RS17575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM404_RS17580 PF00293 NUDIX domain KM404_RS17580 PF13344 Haloacid dehalogenase-like hydrolase KM404_RS17590 PF02803 Thiolase, C-terminal domain KM404_RS17590 PF00108 Thiolase, N-terminal domain KM404_RS17595 PF00501 AMP-binding enzyme KM404_RS17595 PF13193 AMP-binding enzyme C-terminal domain KM404_RS17600 PF02632 BioY family KM404_RS17605 PF00501 AMP-binding enzyme KM404_RS17605 PF13193 AMP-binding enzyme C-terminal domain KM404_RS17625 PF05532 CsbD-like KM404_RS17655 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS17655 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM404_RS17665 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS17665 PF00989 PAS fold KM404_RS17665 PF13188 PAS domain KM404_RS17665 PF13426 PAS domain KM404_RS17665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS17670 PF01738 Dienelactone hydrolase family KM404_RS17675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS17680 PF00474 Sodium:solute symporter family KM404_RS17685 PF01645 Conserved region in glutamate synthase KM404_RS17690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM404_RS17695 PF02559 CarD-like/TRCF domain KM404_RS17700 PF00491 Arginase family KM404_RS17705 PF01979 Amidohydrolase family KM404_RS17710 PF17391 Urocanase N-terminal domain KM404_RS17710 PF17392 Urocanase C-terminal domain KM404_RS17710 PF01175 Urocanase Rossmann-like domain KM404_RS17715 PF00221 Aromatic amino acid lyase KM404_RS17720 PF09021 HutP KM404_RS17725 PF01209 ubiE/COQ5 methyltransferase family KM404_RS17745 PF11084 Protein of unknown function (DUF2621) KM404_RS17760 PF07301 Protein of unknown function (DUF1453) KM404_RS17765 PF02683 Cytochrome C biogenesis protein transmembrane region KM404_RS17775 PF03466 LysR substrate binding domain KM404_RS17775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS17780 PF03788 LrgA family KM404_RS17785 PF04172 LrgB-like family KM404_RS17790 PF13344 Haloacid dehalogenase-like hydrolase KM404_RS17790 PF00293 NUDIX domain KM404_RS17810 PF01510 N-acetylmuramoyl-L-alanine amidase KM404_RS17810 PF01471 Putative peptidoglycan binding domain KM404_RS17825 PF00664 ABC transporter transmembrane region KM404_RS17825 PF00005 ABC transporter KM404_RS17830 PF00005 ABC transporter KM404_RS17830 PF00664 ABC transporter transmembrane region KM404_RS17835 PF03672 Uncharacterised protein family (UPF0154) KM404_RS17840 PF10747 Sporulation inhibitor of replication protein SirA KM404_RS17845 PF02780 Transketolase, C-terminal domain KM404_RS17845 PF00456 Transketolase, thiamine diphosphate binding domain KM404_RS17845 PF02779 Transketolase, pyrimidine binding domain KM404_RS17855 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS17860 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS17865 PF00005 ABC transporter KM404_RS17880 PF05979 Bacterial protein of unknown function (DUF896) KM404_RS17885 PF00239 Resolvase, N terminal domain KM404_RS17890 PF01726 LexA DNA binding domain KM404_RS17890 PF00717 Peptidase S24-like KM404_RS17905 PF03551 Transcriptional regulator PadR-like family KM404_RS17945 PF01471 Putative peptidoglycan binding domain KM404_RS17945 PF01510 N-acetylmuramoyl-L-alanine amidase KM404_RS17945 PF01476 LysM domain KM404_RS17950 PF05105 Bacteriophage holin family KM404_RS18105 PF08281 Sigma-70, region 4 KM404_RS18150 PF02511 Thymidylate synthase complementing protein KM404_RS18155 PF00145 C-5 cytosine-specific DNA methylase KM404_RS18230 PF01381 Helix-turn-helix KM404_RS18250 PF02899 Phage integrase, N-terminal SAM-like domain KM404_RS18250 PF00589 Phage integrase family KM404_RS18255 PF00120 Glutamine synthetase, catalytic domain KM404_RS18255 PF03951 Glutamine synthetase, beta-Grasp domain KM404_RS18260 PF13411 MerR HTH family regulatory protein KM404_RS18265 PF06838 Methionine gamma-lyase KM404_RS18275 PF03458 UPF0126 domain KM404_RS18280 PF00004 ATPase family associated with various cellular activities (AAA) KM404_RS18280 PF17866 AAA lid domain KM404_RS18295 PF17209 Hfq protein KM404_RS18310 PF06725 3D domain KM404_RS18310 PF01476 LysM domain KM404_RS18315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM404_RS18315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM404_RS18320 PF00294 pfkB family carbohydrate kinase KM404_RS18325 PF08220 DeoR-like helix-turn-helix domain KM404_RS18325 PF00455 DeoR C terminal sensor domain KM404_RS18335 PF04238 Protein of unknown function (DUF420) KM404_RS18345 PF00324 Amino acid permease KM404_RS18350 PF00041 Fibronectin type III domain KM404_RS18350 PF00704 Glycosyl hydrolases family 18 KM404_RS18360 PF00149 Calcineurin-like phosphoesterase KM404_RS18360 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM404_RS18365 PF01226 Formate/nitrite transporter KM404_RS18370 PF00216 Bacterial DNA-binding protein KM404_RS18375 PF00403 Heavy-metal-associated domain KM404_RS18380 PF00403 Heavy-metal-associated domain KM404_RS18385 PF02583 Metal-sensitive transcriptional repressor KM404_RS18395 PF00756 Putative esterase KM404_RS18400 PF00005 ABC transporter KM404_RS18405 PF01032 FecCD transport family KM404_RS18410 PF01032 FecCD transport family KM404_RS18420 PF03372 Endonuclease/Exonuclease/phosphatase family KM404_RS18425 PF02805 Metal binding domain of Ada KM404_RS18425 PF12833 Helix-turn-helix domain KM404_RS18430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM404_RS18430 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM404_RS18435 PF00730 HhH-GPD superfamily base excision DNA repair protein KM404_RS18435 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM404_RS18440 PF07687 Peptidase dimerisation domain KM404_RS18440 PF01546 Peptidase family M20/M25/M40 KM404_RS18460 PF00561 alpha/beta hydrolase fold KM404_RS18465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS18470 PF00563 EAL domain KM404_RS18470 PF00990 Diguanylate cyclase, GGDEF domain KM404_RS18470 PF03707 Bacterial signalling protein N terminal repeat KM404_RS18485 PF10787 Uncharacterised protein from bacillus cereus group KM404_RS18490 PF04172 LrgB-like family KM404_RS18495 PF03788 LrgA family KM404_RS18500 PF00392 Bacterial regulatory proteins, gntR family KM404_RS18500 PF00155 Aminotransferase class I and II KM404_RS18505 PF00561 alpha/beta hydrolase fold KM404_RS18505 PF00364 Biotin-requiring enzyme KM404_RS18510 PF02585 GlcNAc-PI de-N-acetylase KM404_RS18525 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM404_RS18530 PF00082 Subtilase family KM404_RS18535 PF07486 Cell Wall Hydrolase KM404_RS18540 PF03275 UDP-galactopyranose mutase KM404_RS18545 PF00884 Sulfatase KM404_RS18550 PF00350 Dynamin family KM404_RS18560 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM404_RS18565 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS18565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS18570 PF00072 Response regulator receiver domain KM404_RS18570 PF00486 Transcriptional regulatory protein, C terminal KM404_RS18585 PF00005 ABC transporter KM404_RS18590 PF08676 MutL C terminal dimerisation domain KM404_RS18590 PF01119 DNA mismatch repair protein, C-terminal domain KM404_RS18595 PF05188 MutS domain II KM404_RS18595 PF05192 MutS domain III KM404_RS18595 PF05190 MutS family domain IV KM404_RS18595 PF00488 MutS domain V KM404_RS18595 PF01624 MutS domain I KM404_RS18600 PF10628 Outer spore coat protein E (CotE) KM404_RS18605 PF06133 Control of competence regulator ComK, YlbF/YmcA KM404_RS18610 PF04055 Radical SAM superfamily KM404_RS18610 PF01938 TRAM domain KM404_RS18610 PF00919 Uncharacterized protein family UPF0004 KM404_RS18615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM404_RS18620 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM404_RS18620 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM404_RS18620 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM404_RS18625 PF01244 Membrane dipeptidase (Peptidase family M19) KM404_RS18630 PF04232 Stage V sporulation protein S (SpoVS) KM404_RS18635 PF13277 YmdB-like protein KM404_RS18640 PF01966 HD domain KM404_RS18640 PF00013 KH domain KM404_RS18640 PF12072 Domain of unknown function (DUF3552) KM404_RS18655 PF00994 Probable molybdopterin binding domain KM404_RS18655 PF18146 Damage-inducible protein CinA KH domain KM404_RS18655 PF02464 Competence-damaged protein KM404_RS18660 PF01066 CDP-alcohol phosphatidyltransferase KM404_RS18665 PF13464 Domain of unknown function (DUF4115) KM404_RS18670 PF11868 Protein of unknown function (DUF3388) KM404_RS18675 PF11588 Protein of unknown function (DUF3243) KM404_RS18685 PF00675 Insulinase (Peptidase family M16) KM404_RS18685 PF05193 Peptidase M16 inactive domain KM404_RS18690 PF05193 Peptidase M16 inactive domain KM404_RS18695 PF02653 Branched-chain amino acid transport system / permease component KM404_RS18705 PF00005 ABC transporter KM404_RS18710 PF02608 ABC transporter substrate-binding protein PnrA-like KM404_RS18715 PF07702 UTRA domain KM404_RS18715 PF00392 Bacterial regulatory proteins, gntR family KM404_RS18720 PF09397 Ftsk gamma domain KM404_RS18720 PF01580 FtsK/SpoIIIE family KM404_RS18720 PF17854 FtsK alpha domain KM404_RS18725 PF14035 YlzJ-like protein KM404_RS18730 PF00574 Clp protease KM404_RS18735 PF00753 Metallo-beta-lactamase superfamily KM404_RS18735 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM404_RS18735 PF17770 Ribonuclease J C-terminal domain KM404_RS18740 PF00701 Dihydrodipicolinate synthetase family KM404_RS18745 PF00696 Amino acid kinase family KM404_RS18745 PF13840 ACT domain KM404_RS18750 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM404_RS18750 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM404_RS18755 PF02441 Flavoprotein KM404_RS18760 PF16924 Dipicolinate synthase subunit A N-terminal domain KM404_RS18760 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM404_RS18765 PF05239 PRC-barrel domain KM404_RS18770 PF05193 Peptidase M16 inactive domain KM404_RS18770 PF00675 Insulinase (Peptidase family M16) KM404_RS18775 PF01522 Polysaccharide deacetylase KM404_RS18780 PF00013 KH domain KM404_RS18780 PF00575 S1 RNA binding domain KM404_RS18780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM404_RS18780 PF03725 3' exoribonuclease family, domain 2 KM404_RS18780 PF01138 3' exoribonuclease family, domain 1 KM404_RS18785 PF00312 Ribosomal protein S15 KM404_RS18790 PF06574 FAD synthetase KM404_RS18790 PF01687 Riboflavin kinase KM404_RS18795 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM404_RS18795 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM404_RS18800 PF02033 Ribosome-binding factor A KM404_RS18805 PF04456 Protein of unknown function (DUF503) KM404_RS18810 PF11987 Translation-initiation factor 2 KM404_RS18810 PF00009 Elongation factor Tu GTP binding domain KM404_RS18810 PF04760 Translation initiation factor IF-2, N-terminal region KM404_RS18815 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM404_RS18820 PF04296 Protein of unknown function (DUF448) KM404_RS18825 PF13184 NusA-like KH domain KM404_RS18825 PF08529 NusA N-terminal domain KM404_RS18825 PF00575 S1 RNA binding domain KM404_RS18830 PF02576 RimP N-terminal domain KM404_RS18830 PF17384 RimP C-terminal SH3 domain KM404_RS18835 PF14579 Helix-hairpin-helix motif KM404_RS18835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM404_RS18835 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM404_RS18835 PF11490 DNA polymerase III polC-type N-terminus II KM404_RS18835 PF14480 DNA polymerase III polC-type N-terminus I KM404_RS18835 PF02811 PHP domain KM404_RS18835 PF00929 Exonuclease KM404_RS18840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM404_RS18840 PF04073 Aminoacyl-tRNA editing domain KM404_RS18840 PF03129 Anticodon binding domain KM404_RS18845 PF17820 PDZ domain KM404_RS18845 PF02163 Peptidase family M50 KM404_RS18850 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM404_RS18850 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM404_RS18850 PF13288 DXP reductoisomerase C-terminal domain KM404_RS18860 PF01255 Putative undecaprenyl diphosphate synthase KM404_RS18865 PF01765 Ribosome recycling factor KM404_RS18870 PF00696 Amino acid kinase family KM404_RS18875 PF00889 Elongation factor TS KM404_RS18880 PF00318 Ribosomal protein S2 KM404_RS18885 PF06018 CodY GAF-like domain KM404_RS18885 PF08222 CodY helix-turn-helix domain KM404_RS18890 PF00004 ATPase family associated with various cellular activities (AAA) KM404_RS18890 PF07724 AAA domain (Cdc48 subfamily) KM404_RS18890 PF10431 C-terminal, D2-small domain, of ClpB protein KM404_RS18895 PF00227 Proteasome subunit KM404_RS18900 PF02899 Phage integrase, N-terminal SAM-like domain KM404_RS18900 PF00589 Phage integrase family KM404_RS18905 PF01134 Glucose inhibited division protein A KM404_RS18910 PF01396 Topoisomerase DNA binding C4 zinc finger KM404_RS18910 PF01751 Toprim domain KM404_RS18910 PF01131 DNA topoisomerase KM404_RS18920 PF00549 CoA-ligase KM404_RS18920 PF02629 CoA binding domain KM404_RS18925 PF00549 CoA-ligase KM404_RS18925 PF08442 ATP-grasp domain KM404_RS18930 PF01351 Ribonuclease HII KM404_RS18935 PF01926 50S ribosome-binding GTPase KM404_RS18940 PF10502 Signal peptidase, peptidase S26 KM404_RS18945 PF01245 Ribosomal protein L19 KM404_RS18950 PF01746 tRNA (Guanine-1)-methyltransferase KM404_RS18955 PF05239 PRC-barrel domain KM404_RS18955 PF01782 RimM N-terminal domain KM404_RS18965 PF00886 Ribosomal protein S16 KM404_RS18970 PF00448 SRP54-type protein, GTPase domain KM404_RS18970 PF02881 SRP54-type protein, helical bundle domain KM404_RS18970 PF02978 Signal peptide binding domain KM404_RS18975 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM404_RS18980 PF00448 SRP54-type protein, GTPase domain KM404_RS18980 PF02881 SRP54-type protein, helical bundle domain KM404_RS18985 PF02463 RecF/RecN/SMC N terminal domain KM404_RS18985 PF06470 SMC proteins Flexible Hinge Domain KM404_RS18990 PF00035 Double-stranded RNA binding motif KM404_RS18990 PF14622 Ribonuclease-III-like KM404_RS18995 PF00550 Phosphopantetheine attachment site KM404_RS19005 PF00698 Acyl transferase domain KM404_RS19010 PF02504 Fatty acid synthesis protein KM404_RS19015 PF03061 Thioesterase superfamily KM404_RS19020 PF00270 DEAD/DEAH box helicase KM404_RS19020 PF00271 Helicase conserved C-terminal domain KM404_RS19020 PF17191 RecG wedge domain KM404_RS19025 PF02734 DAK2 domain KM404_RS19025 PF13684 Dihydroxyacetone kinase family KM404_RS19030 PF03780 Asp23 family, cell envelope-related function KM404_RS19035 PF00830 Ribosomal L28 family KM404_RS19040 PF08183 Stage V sporulation protein family KM404_RS19045 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM404_RS19045 PF04263 Thiamin pyrophosphokinase, catalytic domain KM404_RS19050 PF00834 Ribulose-phosphate 3 epimerase family KM404_RS19055 PF03193 RsgA GTPase KM404_RS19055 PF16745 RsgA N-terminal domain KM404_RS19060 PF03793 PASTA domain KM404_RS19060 PF00069 Protein kinase domain KM404_RS19070 PF04055 Radical SAM superfamily KM404_RS19075 PF01189 16S rRNA methyltransferase RsmB/F KM404_RS19075 PF01029 NusB family KM404_RS19080 PF02911 Formyl transferase, C-terminal domain KM404_RS19080 PF00551 Formyl transferase KM404_RS19085 PF01327 Polypeptide deformylase KM404_RS19090 PF00271 Helicase conserved C-terminal domain KM404_RS19090 PF17764 3′ DNA-binding domain (3′BD) KM404_RS19090 PF18074 Primosomal protein N C-terminal domain KM404_RS19090 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM404_RS19090 PF04851 Type III restriction enzyme, res subunit KM404_RS19095 PF02441 Flavoprotein KM404_RS19095 PF04127 DNA / pantothenate metabolism flavoprotein KM404_RS19100 PF01192 RNA polymerase Rpb6 KM404_RS19105 PF00625 Guanylate kinase KM404_RS19110 PF04025 Domain of unknown function (DUF370) KM404_RS19115 PF08340 Domain of unknown function (DUF1732) KM404_RS19115 PF03755 YicC-like family, N-terminal region KM404_RS19120 PF00689 Cation transporting ATPase, C-terminus KM404_RS19120 PF00690 Cation transporter/ATPase, N-terminus KM404_RS19125 PF05670 NFACT protein RNA binding domain KM404_RS19130 PF00557 Metallopeptidase family M24 KM404_RS19130 PF01321 Creatinase/Prolidase N-terminal domain KM404_RS19160 PF00156 Phosphoribosyl transferase domain KM404_RS19165 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM404_RS19170 PF01180 Dihydroorotate dehydrogenase KM404_RS19175 PF00175 Oxidoreductase NAD-binding domain KM404_RS19175 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM404_RS19180 PF02142 MGS-like domain KM404_RS19180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM404_RS19180 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM404_RS19185 PF00117 Glutamine amidotransferase class-I KM404_RS19185 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM404_RS19190 PF01979 Amidohydrolase family KM404_RS19195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM404_RS19195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM404_RS19200 PF00860 Permease family KM404_RS19205 PF00156 Phosphoribosyl transferase domain KM404_RS19210 PF01479 S4 domain KM404_RS19210 PF00849 RNA pseudouridylate synthase KM404_RS19215 PF01252 Signal peptidase (SPase) II KM404_RS19225 PF06827 Zinc finger found in FPG and IleRS KM404_RS19225 PF08264 Anticodon-binding domain of tRNA KM404_RS19225 PF00133 tRNA synthetases class I (I, L, M and V) KM404_RS19230 PF05103 DivIVA protein KM404_RS19235 PF17774 Putative RNA-binding domain in YlmH KM404_RS19235 PF01479 S4 domain KM404_RS19240 PF02325 YGGT family KM404_RS19245 PF04472 Cell division protein SepF KM404_RS19250 PF01168 Alanine racemase, N-terminal domain KM404_RS19255 PF02578 Multi-copper polyphenol oxidoreductase laccase KM404_RS19260 PF05239 PRC-barrel domain KM404_RS19265 PF04545 Sigma-70, region 4 KM404_RS19265 PF04542 Sigma-70 region 2 KM404_RS19265 PF04539 Sigma-70 region 3 KM404_RS19270 PF04542 Sigma-70 region 2 KM404_RS19270 PF04545 Sigma-70, region 4 KM404_RS19275 PF03419 Sporulation factor SpoIIGA KM404_RS19280 PF00091 Tubulin/FtsZ family, GTPase domain KM404_RS19280 PF12327 FtsZ family, C-terminal domain KM404_RS19285 PF02491 SHS2 domain inserted in FTSA KM404_RS19290 PF08478 POTRA domain, FtsQ-type KM404_RS19290 PF03799 Cell division protein FtsQ KM404_RS19295 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM404_RS19295 PF01565 FAD binding domain KM404_RS19300 PF04101 Glycosyltransferase family 28 C-terminal domain KM404_RS19300 PF03033 Glycosyltransferase family 28 N-terminal domain KM404_RS19305 PF01098 Cell cycle protein KM404_RS19310 PF08245 Mur ligase middle domain KM404_RS19310 PF02875 Mur ligase family, glutamate ligase domain KM404_RS19315 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM404_RS19315 PF00953 Glycosyl transferase family 4 KM404_RS19320 PF01225 Mur ligase family, catalytic domain KM404_RS19320 PF02875 Mur ligase family, glutamate ligase domain KM404_RS19320 PF08245 Mur ligase middle domain KM404_RS19325 PF03793 PASTA domain KM404_RS19325 PF03717 Penicillin-binding Protein dimerisation domain KM404_RS19325 PF00905 Penicillin binding protein transpeptidase domain KM404_RS19330 PF03793 PASTA domain KM404_RS19330 PF03717 Penicillin-binding Protein dimerisation domain KM404_RS19330 PF00905 Penicillin binding protein transpeptidase domain KM404_RS19335 PF04977 Septum formation initiator KM404_RS19340 PF01795 MraW methylase family KM404_RS19345 PF10079 Bacillithiol biosynthesis BshC KM404_RS19350 PF02558 Ketopantoate reductase PanE/ApbA KM404_RS19350 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM404_RS19355 PF00583 Acetyltransferase (GNAT) family KM404_RS19365 PF01783 Ribosomal L32p protein family KM404_RS19370 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM404_RS19415 PF12123 N-acetylmuramoyl-l-alanine amidase KM404_RS19415 PF01510 N-acetylmuramoyl-L-alanine amidase KM404_RS19420 PF05105 Bacteriophage holin family KM404_RS19505 PF00574 Clp protease KM404_RS19515 PF03354 Phage Terminase KM404_RS19535 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM404_RS19590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS19605 PF00692 dUTPase KM404_RS19620 PF04539 Sigma-70 region 3 KM404_RS19620 PF04542 Sigma-70 region 2 KM404_RS19620 PF04545 Sigma-70, region 4 KM404_RS19645 PF01695 IstB-like ATP binding protein KM404_RS19645 PF07319 Primosomal protein DnaI N-terminus KM404_RS19675 PF01381 Helix-turn-helix KM404_RS19690 PF01381 Helix-turn-helix KM404_RS19705 PF14659 Phage integrase, N-terminal SAM-like domain KM404_RS19705 PF00589 Phage integrase family KM404_RS19710 PF05636 HIGH Nucleotidyl Transferase KM404_RS19715 PF05362 Lon protease (S16) C-terminal proteolytic domain KM404_RS19715 PF13180 PDZ domain KM404_RS19720 PF01734 Patatin-like phospholipase KM404_RS19725 PF07670 Nucleoside recognition KM404_RS19730 PF01467 Cytidylyltransferase-like KM404_RS19745 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM404_RS19750 PF06133 Control of competence regulator ComK, YlbF/YmcA KM404_RS19755 PF00300 Histidine phosphatase superfamily (branch 1) KM404_RS19760 PF14003 YlbE-like protein KM404_RS19765 PF14071 Putative coat protein KM404_RS19770 PF14504 CAP-associated N-terminal KM404_RS19770 PF00188 Cysteine-rich secretory protein family KM404_RS19775 PF08868 YugN-like family KM404_RS19780 PF00795 Carbon-nitrogen hydrolase KM404_RS19785 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM404_RS19790 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM404_RS19795 PF00510 Cytochrome c oxidase subunit III KM404_RS19800 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM404_RS19805 PF00034 Cytochrome c KM404_RS19805 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM404_RS19805 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM404_RS19810 PF01040 UbiA prenyltransferase family KM404_RS19815 PF02628 Cytochrome oxidase assembly protein KM404_RS19820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM404_RS19820 PF00289 Biotin carboxylase, N-terminal domain KM404_RS19820 PF00364 Biotin-requiring enzyme KM404_RS19820 PF02785 Biotin carboxylase C-terminal domain KM404_RS19820 PF02436 Conserved carboxylase domain KM404_RS19820 PF00682 HMGL-like KM404_RS19825 PF01098 Cell cycle protein KM404_RS19830 PF07408 Protein of unknown function (DUF1507) KM404_RS19840 PF02562 PhoH-like protein KM404_RS19840 PF13638 PIN domain KM404_RS19850 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM404_RS19860 PF14036 YlaH-like protein KM404_RS19865 PF14492 Elongation Factor G, domain II KM404_RS19865 PF00009 Elongation factor Tu GTP binding domain KM404_RS19865 PF03144 Elongation factor Tu domain 2 KM404_RS19865 PF00679 Elongation factor G C-terminus KM404_RS19875 PF00459 Inositol monophosphatase family KM404_RS19885 PF06335 Protein of unknown function (DUF1054) KM404_RS19890 PF05256 Uncharacterised protein family (UPF0223) KM404_RS19895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM404_RS19895 PF01276 Orn/Lys/Arg decarboxylase, major domain KM404_RS19935 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS19935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM404_RS19940 PF02817 e3 binding domain KM404_RS19940 PF00364 Biotin-requiring enzyme KM404_RS19940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM404_RS19945 PF02780 Transketolase, C-terminal domain KM404_RS19945 PF02779 Transketolase, pyrimidine binding domain KM404_RS19950 PF00676 Dehydrogenase E1 component KM404_RS19960 PF01327 Polypeptide deformylase KM404_RS19970 PF07288 Protein of unknown function (DUF1447) KM404_RS19975 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM404_RS19975 PF17770 Ribonuclease J C-terminal domain KM404_RS19975 PF00753 Metallo-beta-lactamase superfamily KM404_RS19980 PF02254 TrkA-N domain KM404_RS19980 PF02080 TrkA-C domain KM404_RS19990 PF07687 Peptidase dimerisation domain KM404_RS19990 PF01546 Peptidase family M20/M25/M40 KM404_RS19995 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM404_RS19995 PF00132 Bacterial transferase hexapeptide (six repeats) KM404_RS19995 PF14602 Hexapeptide repeat of succinyl-transferase KM404_RS20000 PF03466 LysR substrate binding domain KM404_RS20000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS20015 PF04308 Ribonuclease H-like KM404_RS20025 PF08796 Protein of unknown function (DUF1797) KM404_RS20040 PF10388 EAL-domain associated signalling protein domain KM404_RS20040 PF00563 EAL domain KM404_RS20050 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM404_RS20050 PF00149 Calcineurin-like phosphoesterase KM404_RS20060 PF02503 Polyphosphate kinase middle domain KM404_RS20060 PF13090 Polyphosphate kinase C-terminal domain 2 KM404_RS20060 PF17941 Polyphosphate kinase C-terminal domain 1 KM404_RS20060 PF13089 Polyphosphate kinase N-terminal domain KM404_RS20065 PF02541 Ppx/GppA phosphatase family KM404_RS20070 PF14177 YkyB-like protein KM404_RS20095 PF07690 Major Facilitator Superfamily KM404_RS20105 PF08267 Cobalamin-independent synthase, N-terminal domain KM404_RS20105 PF01717 Cobalamin-independent synthase, Catalytic domain KM404_RS20115 PF14040 Deoxyribonuclease NucA/NucB KM404_RS20125 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS20125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS20135 PF00155 Aminotransferase class I and II KM404_RS20140 PF00356 Bacterial regulatory proteins, lacI family KM404_RS20140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM404_RS20145 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS20150 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS20155 PF13416 Bacterial extracellular solute-binding protein KM404_RS20160 PF00128 Alpha amylase, catalytic domain KM404_RS20160 PF16657 Maltogenic Amylase, C-terminal domain KM404_RS20160 PF02903 Alpha amylase, N-terminal ig-like domain KM404_RS20165 PF00128 Alpha amylase, catalytic domain KM404_RS20165 PF16657 Maltogenic Amylase, C-terminal domain KM404_RS20170 PF00005 ABC transporter KM404_RS20170 PF17912 MalK OB fold domain KM404_RS20170 PF03459 TOBE domain KM404_RS20210 PF02803 Thiolase, C-terminal domain KM404_RS20210 PF00108 Thiolase, N-terminal domain KM404_RS20215 PF00293 NUDIX domain KM404_RS20245 PF03551 Transcriptional regulator PadR-like family KM404_RS20260 PF01008 Initiation factor 2 subunit family KM404_RS20265 PF01636 Phosphotransferase enzyme family KM404_RS20270 PF00795 Carbon-nitrogen hydrolase KM404_RS20275 PF00155 Aminotransferase class I and II KM404_RS20280 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM404_RS20280 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM404_RS20290 PF00596 Class II Aldolase and Adducin N-terminal domain KM404_RS20295 PF03079 ARD/ARD' family KM404_RS20315 PF08448 PAS fold KM404_RS20315 PF00990 Diguanylate cyclase, GGDEF domain KM404_RS20320 PF00881 Nitroreductase family KM404_RS20335 PF02896 PEP-utilising enzyme, TIM barrel domain KM404_RS20335 PF00391 PEP-utilising enzyme, mobile domain KM404_RS20335 PF05524 PEP-utilising enzyme, N-terminal KM404_RS20340 PF00381 PTS HPr component phosphorylation site KM404_RS20345 PF00367 phosphotransferase system, EIIB KM404_RS20345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM404_RS20345 PF02378 Phosphotransferase system, EIIC KM404_RS20350 PF00874 PRD domain KM404_RS20350 PF03123 CAT RNA binding domain KM404_RS20360 PF00392 Bacterial regulatory proteins, gntR family KM404_RS20360 PF07702 UTRA domain KM404_RS20365 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM404_RS20370 PF01979 Amidohydrolase family KM404_RS20380 PF04079 Segregation and condensation complex subunit ScpB KM404_RS20385 PF02616 Segregation and condensation protein ScpA KM404_RS20395 PF03745 Domain of unknown function (DUF309) KM404_RS20400 PF00583 Acetyltransferase (GNAT) family KM404_RS20410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM404_RS20415 PF06207 Protein of unknown function (DUF1002) KM404_RS20425 PF03323 Bacillus/Clostridium GerA spore germination protein KM404_RS20430 PF14097 Stage V sporulation protein AE1 KM404_RS20435 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM404_RS20440 PF07451 Stage V sporulation protein AD (SpoVAD) KM404_RS20445 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM404_RS20450 PF13782 Stage V sporulation protein AB KM404_RS20455 PF12164 Stage V sporulation protein AA KM404_RS20465 PF00209 Sodium:neurotransmitter symporter family KM404_RS20470 PF04542 Sigma-70 region 2 KM404_RS20470 PF04539 Sigma-70 region 3 KM404_RS20470 PF04545 Sigma-70, region 4 KM404_RS20475 PF13581 Histidine kinase-like ATPase domain KM404_RS20480 PF01740 STAS domain KM404_RS20485 PF07943 Penicillin-binding protein 5, C-terminal domain KM404_RS20485 PF00768 D-alanyl-D-alanine carboxypeptidase KM404_RS20490 PF00392 Bacterial regulatory proteins, gntR family KM404_RS20495 PF00005 ABC transporter KM404_RS20510 PF01047 MarR family KM404_RS20520 PF00860 Permease family KM404_RS20525 PF01544 CorA-like Mg2+ transporter protein KM404_RS20530 PF02885 Glycosyl transferase family, helical bundle domain KM404_RS20530 PF00591 Glycosyl transferase family, a/b domain KM404_RS20530 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM404_RS20535 PF01048 Phosphorylase superfamily KM404_RS20540 PF01676 Metalloenzyme superfamily KM404_RS20550 PF02899 Phage integrase, N-terminal SAM-like domain KM404_RS20550 PF00589 Phage integrase family KM404_RS20555 PF14004 Protein of unknown function (DUF4227) KM404_RS20560 PF01475 Ferric uptake regulator family KM404_RS20565 PF01944 Stage II sporulation protein M KM404_RS20575 PF00293 NUDIX domain KM404_RS20580 PF13072 Mother cell inhibitor of FtsZ KM404_RS20585 PF00248 Aldo/keto reductase family KM404_RS20590 PF00248 Aldo/keto reductase family KM404_RS20595 PF04229 GrpB protein KM404_RS20595 PF13673 Acetyltransferase (GNAT) domain KM404_RS20605 PF00565 Staphylococcal nuclease homologue KM404_RS20605 PF00149 Calcineurin-like phosphoesterase KM404_RS20605 PF02872 5'-nucleotidase, C-terminal domain KM404_RS20605 PF00746 LPXTG cell wall anchor motif KM404_RS20615 PF12146 Serine aminopeptidase, S33 KM404_RS20620 PF13726 Na+-H+ antiporter family KM404_RS20620 PF03553 Na+/H+ antiporter family KM404_RS20625 PF00356 Bacterial regulatory proteins, lacI family KM404_RS20630 PF00583 Acetyltransferase (GNAT) family KM404_RS20635 PF12146 Serine aminopeptidase, S33 KM404_RS20640 PF10827 Protein of unknown function (DUF2552) KM404_RS20650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM404_RS20650 PF01872 RibD C-terminal domain KM404_RS20655 PF00677 Lumazine binding domain KM404_RS20660 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM404_RS20660 PF00925 GTP cyclohydrolase II KM404_RS20665 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM404_RS20675 PF06968 Biotin and Thiamin Synthesis associated domain KM404_RS20675 PF04055 Radical SAM superfamily KM404_RS20680 PF13847 Methyltransferase domain KM404_RS20685 PF12697 Alpha/beta hydrolase family KM404_RS20685 PF08241 Methyltransferase domain KM404_RS20690 PF00155 Aminotransferase class I and II KM404_RS20700 PF00202 Aminotransferase class-III KM404_RS20710 PF03553 Na+/H+ antiporter family KM404_RS20715 PF02872 5'-nucleotidase, C-terminal domain KM404_RS20715 PF00149 Calcineurin-like phosphoesterase KM404_RS20725 PF01037 Lrp/AsnC ligand binding domain KM404_RS20725 PF13404 AsnC-type helix-turn-helix domain KM404_RS20740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM404_RS20740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM404_RS20745 PF00202 Aminotransferase class-III KM404_RS20750 PF00696 Amino acid kinase family KM404_RS20755 PF01960 ArgJ family KM404_RS20760 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM404_RS20760 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM404_RS20770 PF00106 short chain dehydrogenase KM404_RS20780 PF03807 NADP oxidoreductase coenzyme F420-dependent KM404_RS20780 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM404_RS20785 PF03313 Serine dehydratase alpha chain KM404_RS20790 PF03315 Serine dehydratase beta chain KM404_RS20790 PF01842 ACT domain KM404_RS20800 PF00753 Metallo-beta-lactamase superfamily KM404_RS20800 PF12706 Beta-lactamase superfamily domain KM404_RS20810 PF11799 impB/mucB/samB family C-terminal domain KM404_RS20810 PF11798 IMS family HHH motif KM404_RS20810 PF00817 impB/mucB/samB family KM404_RS20820 PF07687 Peptidase dimerisation domain KM404_RS20820 PF01546 Peptidase family M20/M25/M40 KM404_RS20825 PF13302 Acetyltransferase (GNAT) domain KM404_RS20840 PF03734 L,D-transpeptidase catalytic domain KM404_RS20845 PF06081 Aromatic acid exporter family member 1 KM404_RS20845 PF11728 Putative aromatic acid exporter C-terminal domain KM404_RS20850 PF00005 ABC transporter KM404_RS20855 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS20860 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM404_RS20865 PF06491 Disulphide isomerase KM404_RS20870 PF11208 Protein of unknown function (DUF2992) KM404_RS20875 PF00293 NUDIX domain KM404_RS20875 PF09297 NADH pyrophosphatase zinc ribbon domain KM404_RS20880 PF01098 Cell cycle protein KM404_RS20885 PF02817 e3 binding domain KM404_RS20885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM404_RS20885 PF00364 Biotin-requiring enzyme KM404_RS20890 PF02780 Transketolase, C-terminal domain KM404_RS20890 PF02779 Transketolase, pyrimidine binding domain KM404_RS20895 PF00676 Dehydrogenase E1 component KM404_RS20900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM404_RS20900 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS20905 PF00871 Acetokinase family KM404_RS20910 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM404_RS20910 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM404_RS20915 PF01515 Phosphate acetyl/butaryl transferase KM404_RS20920 PF02954 Bacterial regulatory protein, Fis family KM404_RS20920 PF00158 Sigma-54 interaction domain KM404_RS20920 PF00989 PAS fold KM404_RS20930 PF03009 Glycerophosphoryl diester phosphodiesterase family KM404_RS20935 PF14174 YycC-like protein KM404_RS20945 PF00072 Response regulator receiver domain KM404_RS20945 PF08769 Sporulation initiation factor Spo0A C terminal KM404_RS20950 PF17820 PDZ domain KM404_RS20950 PF05580 SpoIVB peptidase S55 KM404_RS20955 PF13476 AAA domain KM404_RS20960 PF01316 Arginine repressor, DNA binding domain KM404_RS20960 PF02863 Arginine repressor, C-terminal domain KM404_RS20965 PF01728 FtsJ-like methyltransferase KM404_RS20965 PF01479 S4 domain KM404_RS20970 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM404_RS20970 PF02779 Transketolase, pyrimidine binding domain KM404_RS20970 PF02780 Transketolase, C-terminal domain KM404_RS20975 PF00348 Polyprenyl synthetase KM404_RS20980 PF02609 Exonuclease VII small subunit KM404_RS20985 PF02601 Exonuclease VII, large subunit KM404_RS20985 PF13742 OB-fold nucleic acid binding domain KM404_RS20990 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM404_RS20990 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM404_RS20995 PF01029 NusB family KM404_RS21000 PF03780 Asp23 family, cell envelope-related function KM404_RS21005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM404_RS21005 PF02785 Biotin carboxylase C-terminal domain KM404_RS21005 PF00289 Biotin carboxylase, N-terminal domain KM404_RS21010 PF00364 Biotin-requiring enzyme KM404_RS21020 PF12685 SpoIIIAH-like protein KM404_RS21030 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM404_RS21035 PF09546 Stage III sporulation protein AE (spore_III_AE) KM404_RS21040 PF06686 Stage III sporulation protein AC/AD protein family KM404_RS21045 PF06686 Stage III sporulation protein AC/AD protein family KM404_RS21050 PF09548 Stage III sporulation protein AB (spore_III_AB) KM404_RS21075 PF01132 Elongation factor P (EF-P) OB domain KM404_RS21075 PF09285 Elongation factor P, C-terminal KM404_RS21075 PF08207 Elongation factor P (EF-P) KOW-like domain KM404_RS21080 PF00557 Metallopeptidase family M24 KM404_RS21080 PF01321 Creatinase/Prolidase N-terminal domain KM404_RS21085 PF01220 Dehydroquinase class II KM404_RS21090 PF11085 Conserved membrane protein YqhR KM404_RS21095 PF07136 Protein of unknown function (DUF1385) KM404_RS21105 PF13419 Haloacid dehalogenase-like hydrolase KM404_RS21110 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM404_RS21110 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM404_RS21125 PF03099 Biotin/lipoate A/B protein ligase family KM404_RS21130 PF00581 Rhodanese-like domain KM404_RS21135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM404_RS21135 PF00356 Bacterial regulatory proteins, lacI family KM404_RS21145 PF00893 Small Multidrug Resistance protein KM404_RS21150 PF00893 Small Multidrug Resistance protein KM404_RS21185 PF00005 ABC transporter KM404_RS21190 PF00392 Bacterial regulatory proteins, gntR family KM404_RS21205 PF02347 Glycine cleavage system P-protein KM404_RS21210 PF02347 Glycine cleavage system P-protein KM404_RS21215 PF01571 Aminomethyltransferase folate-binding domain KM404_RS21215 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM404_RS21220 PF00271 Helicase conserved C-terminal domain KM404_RS21220 PF00176 SNF2 family N-terminal domain KM404_RS21225 PF11079 Bacterial protein YqhG of unknown function KM404_RS21245 PF14038 YqzE-like protein KM404_RS21250 PF01202 Shikimate kinase KM404_RS21275 PF07963 Prokaryotic N-terminal methylation motif KM404_RS21285 PF00482 Type II secretion system (T2SS), protein F KM404_RS21290 PF00437 Type II/IV secretion system protein KM404_RS21300 PF11117 Protein of unknown function (DUF2626) KM404_RS21305 PF00375 Sodium:dicarboxylate symporter family KM404_RS21340 PF04101 Glycosyltransferase family 28 C-terminal domain KM404_RS21340 PF03033 Glycosyltransferase family 28 N-terminal domain KM404_RS21345 PF02310 B12 binding domain KM404_RS21345 PF02607 B12 binding domain KM404_RS21345 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM404_RS21345 PF00809 Pterin binding enzyme KM404_RS21345 PF02574 Homocysteine S-methyltransferase KM404_RS21350 PF02219 Methylenetetrahydrofolate reductase KM404_RS21350 PF02574 Homocysteine S-methyltransferase KM404_RS21355 PF01053 Cys/Met metabolism PLP-dependent enzyme KM404_RS21360 PF01053 Cys/Met metabolism PLP-dependent enzyme KM404_RS21370 PF01022 Bacterial regulatory protein, arsR family KM404_RS21380 PF00753 Metallo-beta-lactamase superfamily KM404_RS21385 PF10958 Protein of unknown function (DUF2759) KM404_RS21390 PF00480 ROK family KM404_RS21395 PF06014 Bacterial protein of unknown function (DUF910) KM404_RS21400 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM404_RS21405 PF00471 Ribosomal protein L33 KM404_RS21410 PF00483 Nucleotidyl transferase KM404_RS21415 PF01895 PhoU domain KM404_RS21420 PF00005 ABC transporter KM404_RS21425 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS21430 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS21435 PF12849 PBP superfamily domain KM404_RS21440 PF00905 Penicillin binding protein transpeptidase domain KM404_RS21440 PF03717 Penicillin-binding Protein dimerisation domain KM404_RS21445 PF07690 Major Facilitator Superfamily KM404_RS21450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM404_RS21450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM404_RS21470 PF04551 GcpE protein KM404_RS21475 PF01475 Ferric uptake regulator family KM404_RS21480 PF00950 ABC 3 transport family KM404_RS21485 PF00005 ABC transporter KM404_RS21490 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM404_RS21490 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS21495 PF11116 Protein of unknown function (DUF2624) KM404_RS21500 PF01261 Xylose isomerase-like TIM barrel KM404_RS21505 PF00271 Helicase conserved C-terminal domain KM404_RS21505 PF00270 DEAD/DEAH box helicase KM404_RS21515 PF02401 LytB protein KM404_RS21520 PF01784 NIF3 (NGG1p interacting factor 3) KM404_RS21525 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM404_RS21530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM404_RS21535 PF00140 Sigma-70 factor, region 1.2 KM404_RS21535 PF04539 Sigma-70 region 3 KM404_RS21535 PF03979 Sigma-70 factor, region 1.1 KM404_RS21535 PF04542 Sigma-70 region 2 KM404_RS21535 PF04545 Sigma-70, region 4 KM404_RS21540 PF10410 DnaB-helicase binding domain of primase KM404_RS21540 PF08275 DNA primase catalytic core, N-terminal domain KM404_RS21540 PF01807 CHC2 zinc finger KM404_RS21545 PF03618 Kinase/pyrophosphorylase KM404_RS21550 PF00571 CBS domain KM404_RS21550 PF08279 HTH domain KM404_RS21555 PF02565 Recombination protein O C terminal KM404_RS21555 PF11967 Recombination protein O N terminal KM404_RS21565 PF07650 KH domain KM404_RS21565 PF01926 50S ribosome-binding GTPase KM404_RS21570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM404_RS21575 PF01219 Prokaryotic diacylglycerol kinase KM404_RS21580 PF02130 Uncharacterized protein family UPF0054 KM404_RS21585 PF07697 7TM-HD extracellular KM404_RS21585 PF01966 HD domain KM404_RS21585 PF07698 7TM receptor with intracellular HD hydrolase KM404_RS21590 PF02562 PhoH-like protein KM404_RS21595 PF06898 Putative stage IV sporulation protein YqfD KM404_RS21600 PF07873 YabP family KM404_RS21605 PF09424 Yqey-like protein KM404_RS21610 PF01165 Ribosomal protein S21 KM404_RS21615 PF00919 Uncharacterized protein family UPF0004 KM404_RS21615 PF01938 TRAM domain KM404_RS21615 PF04055 Radical SAM superfamily KM404_RS21620 PF04452 RNA methyltransferase KM404_RS21630 PF01556 DnaJ C terminal domain KM404_RS21630 PF00684 DnaJ central domain KM404_RS21630 PF00226 DnaJ domain KM404_RS21635 PF00012 Hsp70 protein KM404_RS21640 PF01025 GrpE KM404_RS21645 PF01628 HrcA protein C terminal domain KM404_RS21650 PF06969 HemN C-terminal domain KM404_RS21650 PF04055 Radical SAM superfamily KM404_RS21655 PF01638 HxlR-like helix-turn-helix KM404_RS21660 PF00009 Elongation factor Tu GTP binding domain KM404_RS21660 PF00679 Elongation factor G C-terminus KM404_RS21660 PF06421 GTP-binding protein LepA C-terminus KM404_RS21660 PF03144 Elongation factor Tu domain 2 KM404_RS21670 PF03418 Germination protease KM404_RS21675 PF01649 Ribosomal protein S20 KM404_RS21680 PF06144 DNA polymerase III, delta subunit KM404_RS21685 PF14141 YqzM-like protein KM404_RS21690 PF13567 Domain of unknown function (DUF4131) KM404_RS21690 PF03772 Competence protein KM404_RS21690 PF00753 Metallo-beta-lactamase superfamily KM404_RS21695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM404_RS21700 PF10531 SLBB domain KM404_RS21705 PF03807 NADP oxidoreductase coenzyme F420-dependent KM404_RS21705 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM404_RS21710 PF13649 Methyltransferase domain KM404_RS21720 PF01966 HD domain KM404_RS21725 PF01467 Cytidylyltransferase-like KM404_RS21730 PF01985 CRS1 / YhbY (CRM) domain KM404_RS21735 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM404_RS21735 PF01488 Shikimate / quinate 5-dehydrogenase KM404_RS21735 PF08501 Shikimate dehydrogenase substrate binding domain KM404_RS21740 PF01926 50S ribosome-binding GTPase KM404_RS21755 PF02666 Phosphatidylserine decarboxylase KM404_RS21760 PF04545 Sigma-70, region 4 KM404_RS21760 PF04542 Sigma-70 region 2 KM404_RS21770 PF16244 Domain of unknown function (DUF4901) KM404_RS21775 PF00471 Ribosomal protein L33 KM404_RS21780 PF00881 Nitroreductase family KM404_RS21785 PF04607 Region found in RelA / SpoT proteins KM404_RS21795 PF00245 Alkaline phosphatase KM404_RS21805 PF00561 alpha/beta hydrolase fold KM404_RS21805 PF08386 TAP-like protein KM404_RS21840 PF00082 Subtilase family KM404_RS21840 PF13860 FlgD Ig-like domain KM404_RS21840 PF02225 PA domain KM404_RS21840 PF05922 Peptidase inhibitor I9 KM404_RS21845 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM404_RS21860 PF07681 DoxX KM404_RS21890 PF00005 ABC transporter KM404_RS21895 PF01032 FecCD transport family KM404_RS21900 PF01497 Periplasmic binding protein KM404_RS21905 PF14143 YrhC-like protein KM404_RS21910 PF00465 Iron-containing alcohol dehydrogenase KM404_RS21910 PF00171 Aldehyde dehydrogenase family KM404_RS21915 PF01053 Cys/Met metabolism PLP-dependent enzyme KM404_RS21920 PF00291 Pyridoxal-phosphate dependent enzyme KM404_RS21925 PF01048 Phosphorylase superfamily KM404_RS21930 PF08241 Methyltransferase domain KM404_RS21945 PF03717 Penicillin-binding Protein dimerisation domain KM404_RS21945 PF00905 Penicillin binding protein transpeptidase domain KM404_RS21950 PF01272 Transcription elongation factor, GreA/GreB, C-term KM404_RS21950 PF03449 Transcription elongation factor, N-terminal KM404_RS21955 PF00485 Phosphoribulokinase / Uridine kinase family KM404_RS21960 PF01136 Peptidase family U32 KM404_RS21960 PF16325 Peptidase family U32 C-terminal domain KM404_RS21965 PF01136 Peptidase family U32 KM404_RS21970 PF01596 O-methyltransferase KM404_RS21975 PF02618 YceG-like family KM404_RS21980 PF06949 Protein of unknown function (DUF1292) KM404_RS21985 PF03652 Holliday junction resolvase KM404_RS21990 PF06135 IreB regulatory phosphoprotein KM404_RS21995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM404_RS21995 PF01411 tRNA synthetases class II (A) KM404_RS21995 PF02272 DHHA1 domain KM404_RS22005 PF01594 AI-2E family transporter KM404_RS22025 PF14490 Helix-hairpin-helix containing domain KM404_RS22025 PF13538 UvrD-like helicase C-terminal domain KM404_RS22025 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM404_RS22040 PF00266 Aminotransferase class-V KM404_RS22045 PF02082 Transcriptional regulator KM404_RS22050 PF16193 AAA C-terminal domain KM404_RS22050 PF12002 MgsA AAA+ ATPase C terminal KM404_RS22050 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM404_RS22060 PF00899 ThiF family KM404_RS22065 PF01336 OB-fold nucleic acid binding domain KM404_RS22065 PF02938 GAD domain KM404_RS22065 PF00152 tRNA synthetases class II (D, K and N) KM404_RS22070 PF03129 Anticodon binding domain KM404_RS22070 PF13393 Histidyl-tRNA synthetase KM404_RS22080 PF02580 D-Tyr-tRNA(Tyr) deacylase KM404_RS22085 PF02824 TGS domain KM404_RS22085 PF13291 ACT domain KM404_RS22085 PF04607 Region found in RelA / SpoT proteins KM404_RS22090 PF00156 Phosphoribosyl transferase domain KM404_RS22095 PF01368 DHH family KM404_RS22095 PF02272 DHHA1 domain KM404_RS22095 PF17768 RecJ OB domain KM404_RS22095 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM404_RS22100 PF01545 Cation efflux family KM404_RS22100 PF16916 Dimerisation domain of Zinc Transporter KM404_RS22105 PF07549 SecD/SecF GG Motif KM404_RS22105 PF02355 Protein export membrane protein KM404_RS22110 PF13797 Post-transcriptional regulator KM404_RS22115 PF14667 Polysaccharide biosynthesis C-terminal domain KM404_RS22115 PF01943 Polysaccharide biosynthesis protein KM404_RS22120 PF04239 Protein of unknown function (DUF421) KM404_RS22130 PF02699 Preprotein translocase subunit KM404_RS22135 PF01702 Queuine tRNA-ribosyltransferase KM404_RS22140 PF02547 Queuosine biosynthesis protein KM404_RS22145 PF11146 Protein of unknown function (DUF2905) KM404_RS22150 PF17864 RuvB AAA lid domain KM404_RS22150 PF05491 RuvB C-terminal winged helix domain KM404_RS22150 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM404_RS22155 PF07499 RuvA, C-terminal domain KM404_RS22155 PF01330 RuvA N terminal domain KM404_RS22160 PF01497 Periplasmic binding protein KM404_RS22170 PF00892 EamA-like transporter family KM404_RS22175 PF00892 EamA-like transporter family KM404_RS22180 PF01022 Bacterial regulatory protein, arsR family KM404_RS22195 PF01476 LysM domain KM404_RS22200 PF02445 Quinolinate synthetase A protein KM404_RS22205 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM404_RS22205 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM404_RS22210 PF00890 FAD binding domain KM404_RS22210 PF02910 Fumarate reductase flavoprotein C-term KM404_RS22215 PF00266 Aminotransferase class-V KM404_RS22220 PF02829 3H domain KM404_RS22220 PF08279 HTH domain KM404_RS22225 PF03473 MOSC domain KM404_RS22225 PF03475 3-alpha domain KM404_RS22230 PF01842 ACT domain KM404_RS22230 PF00800 Prephenate dehydratase KM404_RS22235 PF02687 FtsX-like permease family KM404_RS22240 PF02687 FtsX-like permease family KM404_RS22245 PF00005 ABC transporter KM404_RS22255 PF00072 Response regulator receiver domain KM404_RS22255 PF00486 Transcriptional regulatory protein, C terminal KM404_RS22260 PF01926 50S ribosome-binding GTPase KM404_RS22260 PF09269 Domain of unknown function (DUF1967) KM404_RS22260 PF01018 GTP1/OBG KM404_RS22265 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM404_RS22265 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM404_RS22270 PF01016 Ribosomal L27 protein KM404_RS22275 PF04327 Cysteine protease Prp KM404_RS22280 PF00829 Ribosomal prokaryotic L21 protein KM404_RS22285 PF00575 S1 RNA binding domain KM404_RS22285 PF10150 Ribonuclease E/G family KM404_RS22290 PF02163 Peptidase family M50 KM404_RS22295 PF01551 Peptidase family M23 KM404_RS22300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM404_RS22305 PF03775 Septum formation inhibitor MinC, C-terminal domain KM404_RS22315 PF04085 rod shape-determining protein MreC KM404_RS22325 PF04002 RadC-like JAB domain KM404_RS22330 PF02545 Maf-like protein KM404_RS22340 PF08245 Mur ligase middle domain KM404_RS22340 PF02875 Mur ligase family, glutamate ligase domain KM404_RS22345 PF08264 Anticodon-binding domain of tRNA KM404_RS22345 PF00133 tRNA synthetases class I (I, L, M and V) KM404_RS22345 PF10458 Valyl tRNA synthetase tRNA binding arm KM404_RS22355 PF01476 LysM domain KM404_RS22360 PF00202 Aminotransferase class-III KM404_RS22365 PF00490 Delta-aminolevulinic acid dehydratase KM404_RS22370 PF02602 Uroporphyrinogen-III synthase HemD KM404_RS22375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM404_RS22375 PF03900 Porphobilinogen deaminase, C-terminal domain KM404_RS22380 PF01578 Cytochrome C assembly protein KM404_RS22385 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM404_RS22385 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM404_RS22385 PF01488 Shikimate / quinate 5-dehydrogenase KM404_RS22390 PF01047 MarR family KM404_RS22395 PF02566 OsmC-like protein KM404_RS22400 PF01926 50S ribosome-binding GTPase KM404_RS22405 PF05362 Lon protease (S16) C-terminal proteolytic domain KM404_RS22405 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM404_RS22405 PF00004 ATPase family associated with various cellular activities (AAA) KM404_RS22410 PF05362 Lon protease (S16) C-terminal proteolytic domain KM404_RS22410 PF00004 ATPase family associated with various cellular activities (AAA) KM404_RS22415 PF10431 C-terminal, D2-small domain, of ClpB protein KM404_RS22415 PF07724 AAA domain (Cdc48 subfamily) KM404_RS22415 PF06689 ClpX C4-type zinc finger KM404_RS22420 PF05697 Bacterial trigger factor protein (TF) KM404_RS22420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM404_RS22420 PF05698 Bacterial trigger factor protein (TF) C-terminus KM404_RS22435 PF08000 Bacterial PH domain KM404_RS22435 PF11724 YvbH-like oligomerisation region KM404_RS22455 PF12850 Calcineurin-like phosphoesterase superfamily domain KM404_RS22460 PF01725 Ham1 family KM404_RS22465 PF03725 3' exoribonuclease family, domain 2 KM404_RS22465 PF01138 3' exoribonuclease family, domain 1 KM404_RS22470 PF10646 Sporulation and spore germination KM404_RS22475 PF01177 Asp/Glu/Hydantoin racemase KM404_RS22480 PF07690 Major Facilitator Superfamily KM404_RS22490 PF00440 Bacterial regulatory proteins, tetR family KM404_RS22505 PF00196 Bacterial regulatory proteins, luxR family KM404_RS22510 PF00860 Permease family KM404_RS22520 PF07969 Amidohydrolase family KM404_RS22525 PF07969 Amidohydrolase family KM404_RS22530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS22535 PF12911 N-terminal TM domain of oligopeptide transport permease C KM404_RS22535 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS22540 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS22545 PF00005 ABC transporter KM404_RS22545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS22550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM404_RS22550 PF00005 ABC transporter KM404_RS22555 PF06580 Histidine kinase KM404_RS22555 PF07694 5TMR of 5TMR-LYT KM404_RS22555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS22560 PF00072 Response regulator receiver domain KM404_RS22560 PF04397 LytTr DNA-binding domain KM404_RS22575 PF04024 PspC domain KM404_RS22580 PF01381 Helix-turn-helix KM404_RS22580 PF07883 Cupin domain KM404_RS22585 PF13536 Putative multidrug resistance efflux transporter KM404_RS22590 PF00230 Major intrinsic protein KM404_RS22595 PF02082 Transcriptional regulator KM404_RS22605 PF13732 Domain of unknown function (DUF4162) KM404_RS22605 PF00005 ABC transporter KM404_RS22610 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM404_RS22620 PF01618 MotA/TolQ/ExbB proton channel family KM404_RS22625 PF02557 D-alanyl-D-alanine carboxypeptidase KM404_RS22630 PF03061 Thioesterase superfamily KM404_RS22635 PF13183 4Fe-4S dicluster domain KM404_RS22635 PF13085 2Fe-2S iron-sulfur cluster binding domain KM404_RS22640 PF02910 Fumarate reductase flavoprotein C-term KM404_RS22640 PF00890 FAD binding domain KM404_RS22645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM404_RS22650 PF10702 Protein of unknown function (DUF2507) KM404_RS22655 PF01541 GIY-YIG catalytic domain KM404_RS22655 PF08459 UvrC Helix-hairpin-helix N-terminal KM404_RS22655 PF02151 UvrB/uvrC motif KM404_RS22660 PF00085 Thioredoxin KM404_RS22665 PF01012 Electron transfer flavoprotein domain KM404_RS22665 PF00766 Electron transfer flavoprotein FAD-binding domain KM404_RS22670 PF01012 Electron transfer flavoprotein domain KM404_RS22675 PF00378 Enoyl-CoA hydratase/isomerase KM404_RS22685 PF00501 AMP-binding enzyme KM404_RS22685 PF13193 AMP-binding enzyme C-terminal domain KM404_RS22695 PF01497 Periplasmic binding protein KM404_RS22700 PF01032 FecCD transport family KM404_RS22705 PF05163 DinB family KM404_RS22735 PF00005 ABC transporter KM404_RS22740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS22740 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS22745 PF00486 Transcriptional regulatory protein, C terminal KM404_RS22745 PF00072 Response regulator receiver domain KM404_RS22755 PF09962 Uncharacterized conserved protein (DUF2196) KM404_RS22760 PF17785 PUA-like domain KM404_RS22760 PF10672 S-adenosylmethionine-dependent methyltransferase KM404_RS22770 PF03992 Antibiotic biosynthesis monooxygenase KM404_RS22775 PF04203 Sortase domain KM404_RS22780 PF00005 ABC transporter KM404_RS22785 PF01032 FecCD transport family KM404_RS22790 PF01497 Periplasmic binding protein KM404_RS22795 PF05031 Iron Transport-associated domain KM404_RS22805 PF05031 Iron Transport-associated domain KM404_RS22810 PF05525 Branched-chain amino acid transport protein KM404_RS22815 PF00849 RNA pseudouridylate synthase KM404_RS22815 PF01479 S4 domain KM404_RS22820 PF01713 Smr domain KM404_RS22820 PF00488 MutS domain V KM404_RS22825 PF14791 DNA polymerase beta thumb KM404_RS22825 PF14716 Helix-hairpin-helix domain KM404_RS22825 PF02811 PHP domain KM404_RS22830 PF02674 Colicin V production protein KM404_RS22835 PF05164 Cell division protein ZapA KM404_RS22840 PF01351 Ribonuclease HII KM404_RS22840 PF11858 Domain of unknown function (DUF3378) KM404_RS22860 PF00152 tRNA synthetases class II (D, K and N) KM404_RS22860 PF01336 OB-fold nucleic acid binding domain KM404_RS22865 PF01588 Putative tRNA binding domain KM404_RS22865 PF03483 B3/4 domain KM404_RS22865 PF03484 tRNA synthetase B5 domain KM404_RS22865 PF03147 Ferredoxin-fold anticodon binding domain KM404_RS22865 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM404_RS22870 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM404_RS22870 PF01409 tRNA synthetases class II core domain (F) KM404_RS22875 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM404_RS22875 PF00588 SpoU rRNA Methylase family KM404_RS22880 PF14098 Small, acid-soluble spore protein I KM404_RS22885 PF01966 HD domain KM404_RS22910 PF07690 Major Facilitator Superfamily KM404_RS22920 PF16859 Tetracyclin repressor-like, C-terminal domain KM404_RS22920 PF00440 Bacterial regulatory proteins, tetR family KM404_RS22925 PF05343 M42 glutamyl aminopeptidase KM404_RS22935 PF00453 Ribosomal protein L20 KM404_RS22940 PF01632 Ribosomal protein L35 KM404_RS22945 PF00707 Translation initiation factor IF-3, C-terminal domain KM404_RS22945 PF05198 Translation initiation factor IF-3, N-terminal domain KM404_RS22950 PF03129 Anticodon binding domain KM404_RS22950 PF02824 TGS domain KM404_RS22950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM404_RS22950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM404_RS22955 PF08812 YtxC-like family KM404_RS22960 PF01695 IstB-like ATP binding protein KM404_RS22960 PF07319 Primosomal protein DnaI N-terminus KM404_RS22965 PF07261 Replication initiation and membrane attachment KM404_RS22970 PF03477 ATP cone domain KM404_RS22975 PF02675 S-adenosylmethionine decarboxylase KM404_RS22980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM404_RS22980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM404_RS22985 PF01121 Dephospho-CoA kinase KM404_RS22990 PF02659 Putative manganese efflux pump KM404_RS22995 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM404_RS22995 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM404_RS22995 PF06827 Zinc finger found in FPG and IleRS KM404_RS23000 PF01367 5'-3' exonuclease, C-terminal SAM fold KM404_RS23000 PF00476 DNA polymerase family A KM404_RS23000 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM404_RS23005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS23005 PF00989 PAS fold KM404_RS23005 PF16736 Single Cache-like KM404_RS23005 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS23010 PF00072 Response regulator receiver domain KM404_RS23010 PF00486 Transcriptional regulatory protein, C terminal KM404_RS23025 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM404_RS23025 PF00056 lactate/malate dehydrogenase, NAD binding domain KM404_RS23030 PF00180 Isocitrate/isopropylmalate dehydrogenase KM404_RS23035 PF00285 Citrate synthase, C-terminal domain KM404_RS23040 PF04284 Protein of unknown function (DUF441) KM404_RS23045 PF01594 AI-2E family transporter KM404_RS23050 PF04186 FxsA cytoplasmic membrane protein KM404_RS23055 PF00391 PEP-utilising enzyme, mobile domain KM404_RS23055 PF00224 Pyruvate kinase, barrel domain KM404_RS23055 PF02887 Pyruvate kinase, alpha/beta domain KM404_RS23060 PF00365 Phosphofructokinase KM404_RS23065 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM404_RS23070 PF01039 Carboxyl transferase domain KM404_RS23070 PF17848 Acetyl-coA carboxylase zinc finger domain KM404_RS23075 PF00392 Bacterial regulatory proteins, gntR family KM404_RS23080 PF00390 Malic enzyme, N-terminal domain KM404_RS23080 PF03949 Malic enzyme, NAD binding domain KM404_RS23085 PF14579 Helix-hairpin-helix motif KM404_RS23085 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM404_RS23085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM404_RS23085 PF02811 PHP domain KM404_RS23085 PF01336 OB-fold nucleic acid binding domain KM404_RS23090 PF14034 Sporulation protein YtrH KM404_RS23100 PF02272 DHHA1 domain KM404_RS23100 PF01368 DHH family KM404_RS23105 PF14007 YtpI-like protein KM404_RS23120 PF00392 Bacterial regulatory proteins, gntR family KM404_RS23120 PF07085 DRTGG domain KM404_RS23120 PF00571 CBS domain KM404_RS23120 PF03061 Thioesterase superfamily KM404_RS23135 PF00557 Metallopeptidase family M24 KM404_RS23135 PF01321 Creatinase/Prolidase N-terminal domain KM404_RS23140 PF11518 Protein of unknown function (DUF3221) KM404_RS23175 PF12746 GNAT acetyltransferase KM404_RS23180 PF07883 Cupin domain KM404_RS23190 PF01381 Helix-turn-helix KM404_RS23200 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM404_RS23200 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM404_RS23210 PF00582 Universal stress protein family KM404_RS23230 PF14698 Argininosuccinate lyase C-terminal KM404_RS23230 PF00206 Lyase KM404_RS23235 PF00764 Arginosuccinate synthase KM404_RS23250 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM404_RS23250 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS23255 PF12787 EcsC protein family KM404_RS23270 PF00871 Acetokinase family KM404_RS23275 PF02384 N-6 DNA Methylase KM404_RS23280 PF08534 Redoxin KM404_RS23285 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM404_RS23295 PF01513 ATP-NAD kinase KM404_RS23300 PF07969 Amidohydrolase family KM404_RS23310 PF13193 AMP-binding enzyme C-terminal domain KM404_RS23310 PF00501 AMP-binding enzyme KM404_RS23315 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM404_RS23320 PF02568 Thiamine biosynthesis protein (ThiI) KM404_RS23320 PF02926 THUMP domain KM404_RS23325 PF00266 Aminotransferase class-V KM404_RS23330 PF06160 Septation ring formation regulator, EzrA KM404_RS23335 PF03466 LysR substrate binding domain KM404_RS23335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS23340 PF00892 EamA-like transporter family KM404_RS23350 PF13185 GAF domain KM404_RS23355 PF01053 Cys/Met metabolism PLP-dependent enzyme KM404_RS23360 PF01479 S4 domain KM404_RS23360 PF00163 Ribosomal protein S4/S9 N-terminal domain KM404_RS23375 PF01479 S4 domain KM404_RS23375 PF00579 tRNA synthetases class I (W and Y) KM404_RS23385 PF08281 Sigma-70, region 4 KM404_RS23385 PF04542 Sigma-70 region 2 KM404_RS23395 PF13193 AMP-binding enzyme C-terminal domain KM404_RS23395 PF00501 AMP-binding enzyme KM404_RS23400 PF00583 Acetyltransferase (GNAT) family KM404_RS23405 PF00571 CBS domain KM404_RS23410 PF00850 Histone deacetylase domain KM404_RS23420 PF00486 Transcriptional regulatory protein, C terminal KM404_RS23420 PF00072 Response regulator receiver domain KM404_RS23425 PF00672 HAMP domain KM404_RS23425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS23425 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS23425 PF13426 PAS domain KM404_RS23430 PF12796 Ankyrin repeats (3 copies) KM404_RS23435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM404_RS23440 PF01741 Large-conductance mechanosensitive channel, MscL KM404_RS23465 PF00356 Bacterial regulatory proteins, lacI family KM404_RS23470 PF07537 CamS sex pheromone cAM373 precursor KM404_RS23475 PF11009 Protein of unknown function (DUF2847) KM404_RS23485 PF02073 Thermophilic metalloprotease (M29) KM404_RS23505 PF13302 Acetyltransferase (GNAT) domain KM404_RS23510 PF08245 Mur ligase middle domain KM404_RS23510 PF02875 Mur ligase family, glutamate ligase domain KM404_RS23510 PF01225 Mur ligase family, catalytic domain KM404_RS23520 PF09397 Ftsk gamma domain KM404_RS23520 PF01580 FtsK/SpoIIIE family KM404_RS23520 PF17854 FtsK alpha domain KM404_RS23530 PF14794 Domain of unknown function (DUF4479) KM404_RS23530 PF01588 Putative tRNA binding domain KM404_RS23535 PF07285 Protein of unknown function (DUF1444) KM404_RS23540 PF00085 Thioredoxin KM404_RS23545 PF01931 Protein of unknown function DUF84 KM404_RS23550 PF05343 M42 glutamyl aminopeptidase KM404_RS23560 PF00753 Metallo-beta-lactamase superfamily KM404_RS23565 PF02390 Putative methyltransferase KM404_RS23570 PF14165 YtzH-like protein KM404_RS23575 PF01636 Phosphotransferase enzyme family KM404_RS23580 PF17999 Pullulanase N1-terminal domain KM404_RS23580 PF00128 Alpha amylase, catalytic domain KM404_RS23580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM404_RS23585 PF02834 LigT like Phosphoesterase KM404_RS23595 PF08220 DeoR-like helix-turn-helix domain KM404_RS23600 PF01479 S4 domain KM404_RS23600 PF00849 RNA pseudouridylate synthase KM404_RS23605 PF14667 Polysaccharide biosynthesis C-terminal domain KM404_RS23605 PF01943 Polysaccharide biosynthesis protein KM404_RS23615 PF07690 Major Facilitator Superfamily KM404_RS23620 PF01022 Bacterial regulatory protein, arsR family KM404_RS23625 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM404_RS23635 PF10957 Sporulation protein Cse60 KM404_RS23645 PF02559 CarD-like/TRCF domain KM404_RS23655 PF06800 Sugar transport protein KM404_RS23670 PF02391 MoaE protein KM404_RS23675 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM404_RS23680 PF00994 Probable molybdopterin binding domain KM404_RS23680 PF03453 MoeA N-terminal region (domain I and II) KM404_RS23680 PF03454 MoeA C-terminal region (domain IV) KM404_RS23685 PF01967 MoaC family KM404_RS23690 PF00899 ThiF family KM404_RS23715 PF00581 Rhodanese-like domain KM404_RS23725 PF00561 alpha/beta hydrolase fold KM404_RS23730 PF03323 Bacillus/Clostridium GerA spore germination protein KM404_RS23735 PF03845 Spore germination protein KM404_RS23760 PF09334 tRNA synthetases class I (M) KM404_RS23760 PF00133 tRNA synthetases class I (I, L, M and V) KM404_RS23760 PF13603 Leucyl-tRNA synthetase, Domain 2 KM404_RS23760 PF08264 Anticodon-binding domain of tRNA KM404_RS23765 PF07690 Major Facilitator Superfamily KM404_RS23770 PF00999 Sodium/hydrogen exchanger family KM404_RS23775 PF02080 TrkA-C domain KM404_RS23780 PF00589 Phage integrase family KM404_RS23790 PF00005 ABC transporter KM404_RS23795 PF07786 Protein of unknown function (DUF1624) KM404_RS23795 PF04235 Protein of unknown function (DUF418) KM404_RS23805 PF10732 Protein of unknown function (DUF2524) KM404_RS23810 PF04055 Radical SAM superfamily KM404_RS23810 PF16199 Radical_SAM C-terminal domain KM404_RS23815 PF06962 Putative rRNA methylase KM404_RS23820 PF00005 ABC transporter KM404_RS23820 PF13732 Domain of unknown function (DUF4162) KM404_RS23830 PF01177 Asp/Glu/Hydantoin racemase KM404_RS23845 PF10776 Protein of unknown function (DUF2600) KM404_RS23850 PF12146 Serine aminopeptidase, S33 KM404_RS23855 PF00132 Bacterial transferase hexapeptide (six repeats) KM404_RS23860 PF01569 PAP2 superfamily KM404_RS23865 PF00534 Glycosyl transferases group 1 KM404_RS23865 PF13439 Glycosyltransferase Family 4 KM404_RS23870 PF12804 MobA-like NTP transferase domain KM404_RS23875 PF00994 Probable molybdopterin binding domain KM404_RS23885 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM404_RS23885 PF02772 S-adenosylmethionine synthetase, central domain KM404_RS23885 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM404_RS23890 PF01293 Phosphoenolpyruvate carboxykinase KM404_RS23925 PF01784 NIF3 (NGG1p interacting factor 3) KM404_RS23930 PF13426 PAS domain KM404_RS23930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS23930 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS23930 PF00989 PAS fold KM404_RS23930 PF13188 PAS domain KM404_RS23935 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS23935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS23935 PF00989 PAS fold KM404_RS23935 PF08447 PAS fold KM404_RS23940 PF00561 alpha/beta hydrolase fold KM404_RS23940 PF08386 TAP-like protein KM404_RS23965 PF00005 ABC transporter KM404_RS23970 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS23995 PF00293 NUDIX domain KM404_RS24020 PF02664 S-Ribosylhomocysteinase (LuxS) KM404_RS24025 PF01809 Putative membrane protein insertion efficiency factor KM404_RS24030 PF00484 Carbonic anhydrase KM404_RS24035 PF01654 Cytochrome bd terminal oxidase subunit I KM404_RS24040 PF02322 Cytochrome bd terminal oxidase subunit II KM404_RS24045 PF10676 Spore germination protein gerPA/gerPF KM404_RS24060 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS24060 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM404_RS24085 PF04012 PspA/IM30 family KM404_RS24100 PF17910 FeoB cytosolic helical domain KM404_RS24100 PF07670 Nucleoside recognition KM404_RS24100 PF02421 Ferrous iron transport protein B KM404_RS24100 PF07664 Ferrous iron transport protein B C terminus KM404_RS24110 PF09515 Thiamine transporter protein (Thia_YuaJ) KM404_RS24115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS24115 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS24115 PF00672 HAMP domain KM404_RS24120 PF00486 Transcriptional regulatory protein, C terminal KM404_RS24120 PF00072 Response regulator receiver domain KM404_RS24145 PF00156 Phosphoribosyl transferase domain KM404_RS24150 PF00781 Diacylglycerol kinase catalytic domain KM404_RS24170 PF00248 Aldo/keto reductase family KM404_RS24185 PF09335 SNARE associated Golgi protein KM404_RS24190 PF00398 Ribosomal RNA adenine dimethylase KM404_RS24195 PF02687 FtsX-like permease family KM404_RS24200 PF00005 ABC transporter KM404_RS24205 PF06445 GyrI-like small molecule binding domain KM404_RS24205 PF12833 Helix-turn-helix domain KM404_RS24210 PF00072 Response regulator receiver domain KM404_RS24210 PF00486 Transcriptional regulatory protein, C terminal KM404_RS24215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS24225 PF02687 FtsX-like permease family KM404_RS24230 PF00005 ABC transporter KM404_RS24245 PF02447 GntP family permease KM404_RS24250 PF07702 UTRA domain KM404_RS24250 PF00392 Bacterial regulatory proteins, gntR family KM404_RS24260 PF07071 KDGP aldolase KM404_RS24265 PF03841 L-seryl-tRNA selenium transferase KM404_RS24270 PF01979 Amidohydrolase family KM404_RS24285 PF02557 D-alanyl-D-alanine carboxypeptidase KM404_RS24290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS24290 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS24295 PF00486 Transcriptional regulatory protein, C terminal KM404_RS24295 PF00072 Response regulator receiver domain KM404_RS24300 PF13378 Enolase C-terminal domain-like KM404_RS24300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM404_RS24305 PF00501 AMP-binding enzyme KM404_RS24305 PF13193 AMP-binding enzyme C-terminal domain KM404_RS24310 PF00378 Enoyl-CoA hydratase/isomerase KM404_RS24315 PF00561 alpha/beta hydrolase fold KM404_RS24320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM404_RS24320 PF16582 Middle domain of thiamine pyrophosphate KM404_RS24320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM404_RS24325 PF00425 chorismate binding enzyme KM404_RS24330 PF01040 UbiA prenyltransferase family KM404_RS24335 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM404_RS24340 PF00313 'Cold-shock' DNA-binding domain KM404_RS24355 PF00343 Carbohydrate phosphorylase KM404_RS24360 PF00534 Glycosyl transferases group 1 KM404_RS24360 PF08323 Starch synthase catalytic domain KM404_RS24365 PF00483 Nucleotidyl transferase KM404_RS24370 PF00483 Nucleotidyl transferase KM404_RS24375 PF00128 Alpha amylase, catalytic domain KM404_RS24375 PF02806 Alpha amylase, C-terminal all-beta domain KM404_RS24375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM404_RS24385 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM404_RS24385 PF00056 lactate/malate dehydrogenase, NAD binding domain KM404_RS24480 PF05698 Bacterial trigger factor protein (TF) C-terminus KM404_RS24480 PF05697 Bacterial trigger factor protein (TF) KM404_RS24515 PF02308 MgtC family KM404_RS24520 PF07885 Ion channel KM404_RS24520 PF02254 TrkA-N domain KM404_RS24525 PF08868 YugN-like family KM404_RS24530 PF00342 Phosphoglucose isomerase KM404_RS24535 PF04070 Domain of unknown function (DUF378) KM404_RS24540 PF00575 S1 RNA binding domain KM404_RS24545 PF00155 Aminotransferase class I and II KM404_RS24550 PF01037 Lrp/AsnC ligand binding domain KM404_RS24555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM404_RS24555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM404_RS24560 PF08386 TAP-like protein KM404_RS24560 PF00561 alpha/beta hydrolase fold KM404_RS24570 PF00155 Aminotransferase class I and II KM404_RS24585 PF08810 Kinase associated protein B KM404_RS24590 PF00929 Exonuclease KM404_RS24595 PF03600 Citrate transporter KM404_RS24610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM404_RS24610 PF03129 Anticodon binding domain KM404_RS24615 PF03061 Thioesterase superfamily KM404_RS24625 PF02632 BioY family KM404_RS24635 PF00483 Nucleotidyl transferase KM404_RS24640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM404_RS24640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM404_RS24640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM404_RS24640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM404_RS24645 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM404_RS24645 PF10372 Bacterial membrane-spanning protein N-terminus KM404_RS24650 PF00883 Cytosol aminopeptidase family, catalytic domain KM404_RS24650 PF02789 Cytosol aminopeptidase family, N-terminal domain KM404_RS24655 PF06725 3D domain KM404_RS24665 PF13344 Haloacid dehalogenase-like hydrolase KM404_RS24665 PF00293 NUDIX domain KM404_RS24670 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS24675 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS24685 PF06445 GyrI-like small molecule binding domain KM404_RS24700 PF04463 Protein of unknown function (DUF523) KM404_RS24720 PF01521 Iron-sulphur cluster biosynthesis KM404_RS24725 PF01678 Diaminopimelate epimerase KM404_RS24730 PF07293 Protein of unknown function (DUF1450) KM404_RS24735 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS24745 PF09383 NIL domain KM404_RS24745 PF00005 ABC transporter KM404_RS24750 PF03649 Uncharacterised protein family (UPF0014) KM404_RS24755 PF03831 PhnA domain KM404_RS24755 PF08274 PhnA Zinc-Ribbon KM404_RS24790 PF13427 Domain of unknown function (DUF4111) KM404_RS24790 PF01909 Nucleotidyltransferase domain KM404_RS24795 PF07315 Protein of unknown function (DUF1462) KM404_RS24800 PF01106 NifU-like domain KM404_RS24815 PF04608 Phosphatidylglycerophosphatase A KM404_RS24825 PF02525 Flavodoxin-like fold KM404_RS24830 PF13344 Haloacid dehalogenase-like hydrolase KM404_RS24840 PF01934 Protein of unknown function DUF86 KM404_RS24845 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM404_RS24860 PF06265 Protein of unknown function (DUF1027) KM404_RS24865 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM404_RS24870 PF13411 MerR HTH family regulatory protein KM404_RS24870 PF07739 TipAS antibiotic-recognition domain KM404_RS24875 PF10086 YhfC intramembrane metalloprotease KM404_RS24895 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM404_RS24895 PF04055 Radical SAM superfamily KM404_RS24900 PF01551 Peptidase family M23 KM404_RS24910 PF08827 Domain of unknown function (DUF1805) KM404_RS24915 PF02872 5'-nucleotidase, C-terminal domain KM404_RS24920 PF03551 Transcriptional regulator PadR-like family KM404_RS24925 PF04892 VanZ like family KM404_RS24930 PF01458 Uncharacterized protein family (UPF0051) KM404_RS24935 PF01592 NifU-like N terminal domain KM404_RS24940 PF00266 Aminotransferase class-V KM404_RS24945 PF01458 Uncharacterized protein family (UPF0051) KM404_RS24950 PF00005 ABC transporter KM404_RS24955 PF03180 NLPA lipoprotein KM404_RS24960 PF03180 NLPA lipoprotein KM404_RS24965 PF00528 Binding-protein-dependent transport system inner membrane component KM404_RS24970 PF09383 NIL domain KM404_RS24970 PF00005 ABC transporter KM404_RS24980 PF00085 Thioredoxin KM404_RS24985 PF01751 Toprim domain KM404_RS24990 PF01597 Glycine cleavage H-protein KM404_RS24995 PF03960 ArsC family KM404_RS25040 PF00056 lactate/malate dehydrogenase, NAD binding domain KM404_RS25040 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM404_RS25065 PF13305 Tetracyclin repressor-like, C-terminal domain KM404_RS25065 PF00440 Bacterial regulatory proteins, tetR family KM404_RS25070 PF00753 Metallo-beta-lactamase superfamily KM404_RS25075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM404_RS25075 PF02770 Acyl-CoA dehydrogenase, middle domain KM404_RS25075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM404_RS25080 PF02803 Thiolase, C-terminal domain KM404_RS25080 PF00108 Thiolase, N-terminal domain KM404_RS25085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM404_RS25085 PF00378 Enoyl-CoA hydratase/isomerase KM404_RS25085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM404_RS25090 PF14115 YuzL-like protein KM404_RS25095 PF00768 D-alanyl-D-alanine carboxypeptidase KM404_RS25095 PF07943 Penicillin-binding protein 5, C-terminal domain KM404_RS25100 PF01619 Proline dehydrogenase KM404_RS25105 PF10835 Protein of unknown function (DUF2573) KM404_RS25110 PF01910 Thiamine-binding protein KM404_RS25115 PF02743 Cache domain KM404_RS25115 PF00672 HAMP domain KM404_RS25115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS25135 PF07690 Major Facilitator Superfamily KM404_RS25140 PF13520 Amino acid permease KM404_RS25150 PF02096 60Kd inner membrane protein KM404_RS25160 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM404_RS25160 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM404_RS25195 PF09335 SNARE associated Golgi protein KM404_RS25205 PF17969 L,D-transpeptidase C-terminal domain KM404_RS25205 PF03734 L,D-transpeptidase catalytic domain KM404_RS25210 PF00072 Response regulator receiver domain KM404_RS25210 PF00486 Transcriptional regulatory protein, C terminal KM404_RS25215 PF16736 Single Cache-like KM404_RS25215 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS25215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS25215 PF00989 PAS fold KM404_RS25225 PF08264 Anticodon-binding domain of tRNA KM404_RS25225 PF09334 tRNA synthetases class I (M) KM404_RS25235 PF02743 Cache domain KM404_RS25235 PF00672 HAMP domain KM404_RS25235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS25240 PF01883 Iron-sulfur cluster assembly protein KM404_RS25245 PF01447 Thermolysin metallopeptidase, catalytic domain KM404_RS25245 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM404_RS25245 PF03413 Peptidase propeptide and YPEB domain KM404_RS25245 PF07504 Fungalysin/Thermolysin Propeptide Motif KM404_RS25250 PF02678 Pirin KM404_RS25250 PF17954 Quercetinase C-terminal cupin domain KM404_RS25255 PF01047 MarR family KM404_RS25265 PF00999 Sodium/hydrogen exchanger family KM404_RS25270 PF02080 TrkA-C domain KM404_RS25275 PF01235 Sodium:alanine symporter family KM404_RS25280 PF00210 Ferritin-like domain KM404_RS25295 PF03641 Possible lysine decarboxylase KM404_RS25305 PF00210 Ferritin-like domain KM404_RS25315 PF01773 Na+ dependent nucleoside transporter N-terminus KM404_RS25315 PF07662 Na+ dependent nucleoside transporter C-terminus KM404_RS25320 PF07662 Na+ dependent nucleoside transporter C-terminus KM404_RS25320 PF01773 Na+ dependent nucleoside transporter N-terminus KM404_RS25325 PF01235 Sodium:alanine symporter family KM404_RS25330 PF01235 Sodium:alanine symporter family KM404_RS25335 PF13460 NAD(P)H-binding KM404_RS25350 PF00248 Aldo/keto reductase family KM404_RS25355 PF07690 Major Facilitator Superfamily KM404_RS25360 PF01638 HxlR-like helix-turn-helix KM404_RS25365 PF07849 Protein of unknown function (DUF1641) KM404_RS25370 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS25375 PF01479 S4 domain KM404_RS25375 PF00579 tRNA synthetases class I (W and Y) KM404_RS25380 PF01565 FAD binding domain KM404_RS25380 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM404_RS25390 PF17202 Single cache domain 3 KM404_RS25390 PF00672 HAMP domain KM404_RS25390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS25400 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM404_RS25405 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM404_RS25420 PF13302 Acetyltransferase (GNAT) domain KM404_RS25425 PF06146 Phosphate-starvation-inducible E KM404_RS25440 PF00005 ABC transporter KM404_RS25445 PF01032 FecCD transport family KM404_RS25450 PF01032 FecCD transport family KM404_RS25460 PF00072 Response regulator receiver domain KM404_RS25460 PF00486 Transcriptional regulatory protein, C terminal KM404_RS25470 PF01668 SmpB protein KM404_RS25475 PF00773 RNB domain KM404_RS25475 PF08206 Ribonuclease B OB domain KM404_RS25475 PF00575 S1 RNA binding domain KM404_RS25475 PF17876 Cold shock domain KM404_RS25480 PF12146 Serine aminopeptidase, S33 KM404_RS25485 PF03840 Preprotein translocase SecG subunit KM404_RS25490 PF04172 LrgB-like family KM404_RS25495 PF03788 LrgA family KM404_RS25500 PF01156 Inosine-uridine preferring nucleoside hydrolase KM404_RS25585 PF04860 Phage portal protein KM404_RS25610 PF00589 Phage integrase family KM404_RS25610 PF02899 Phage integrase, N-terminal SAM-like domain KM404_RS25615 PF00113 Enolase, C-terminal TIM barrel domain KM404_RS25615 PF03952 Enolase, N-terminal domain KM404_RS25620 PF01676 Metalloenzyme superfamily KM404_RS25620 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM404_RS25625 PF00121 Triosephosphate isomerase KM404_RS25630 PF00162 Phosphoglycerate kinase KM404_RS25635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM404_RS25635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM404_RS25640 PF04198 Putative sugar-binding domain KM404_RS25650 PF04552 Sigma-54, DNA binding domain KM404_RS25650 PF04963 Sigma-54 factor, core binding domain KM404_RS25650 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM404_RS25670 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM404_RS25675 PF07451 Stage V sporulation protein AD (SpoVAD) KM404_RS25680 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM404_RS25690 PF04239 Protein of unknown function (DUF421) KM404_RS25695 PF00574 Clp protease KM404_RS25700 PF00381 PTS HPr component phosphorylation site KM404_RS25705 PF02650 WhiA C-terminal HTH domain KM404_RS25705 PF14527 WhiA LAGLIDADG-like domain KM404_RS25705 PF10298 WhiA N-terminal LAGLIDADG-like domain KM404_RS25710 PF01933 Uncharacterised protein family UPF0052 KM404_RS25715 PF03668 P-loop ATPase protein family KM404_RS25720 PF00293 NUDIX domain KM404_RS25730 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM404_RS25740 PF14602 Hexapeptide repeat of succinyl-transferase KM404_RS25745 PF13419 Haloacid dehalogenase-like hydrolase KM404_RS25750 PF01790 Prolipoprotein diacylglyceryl transferase KM404_RS25755 PF02603 HPr Serine kinase N terminus KM404_RS25755 PF07475 HPr Serine kinase C-terminal domain KM404_RS25760 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM404_RS25770 PF00005 ABC transporter KM404_RS25770 PF17755 UvrA DNA-binding domain KM404_RS25770 PF17760 UvrA interaction domain KM404_RS25775 PF00271 Helicase conserved C-terminal domain KM404_RS25775 PF04851 Type III restriction enzyme, res subunit KM404_RS25775 PF02151 UvrB/uvrC motif KM404_RS25775 PF12344 Ultra-violet resistance protein B KM404_RS25775 PF17757 UvrB interaction domain KM404_RS25780 PF12323 Helix-turn-helix domain KM404_RS25780 PF01385 Probable transposase KM404_RS25780 PF07282 Putative transposase DNA-binding domain KM404_RS25795 PF13411 MerR HTH family regulatory protein KM404_RS25795 PF07739 TipAS antibiotic-recognition domain KM404_RS25820 PF03601 Conserved hypothetical protein 698 KM404_RS25825 PF03466 LysR substrate binding domain KM404_RS25825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS25830 PF13411 MerR HTH family regulatory protein KM404_RS25835 PF03358 NADPH-dependent FMN reductase KM404_RS25840 PF12848 ABC transporter KM404_RS25840 PF00005 ABC transporter KM404_RS25850 PF00664 ABC transporter transmembrane region KM404_RS25850 PF00005 ABC transporter KM404_RS25855 PF17820 PDZ domain KM404_RS25860 PF17820 PDZ domain KM404_RS25860 PF03572 Peptidase family S41 KM404_RS25860 PF01471 Putative peptidoglycan binding domain KM404_RS25865 PF02687 FtsX-like permease family KM404_RS25865 PF18075 FtsX extracellular domain KM404_RS25870 PF00005 ABC transporter KM404_RS25875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM404_RS25885 PF07516 SecA Wing and Scaffold domain KM404_RS25885 PF02810 SEC-C motif KM404_RS25885 PF07517 SecA DEAD-like domain KM404_RS25885 PF01043 SecA preprotein cross-linking domain KM404_RS25890 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM404_RS25890 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM404_RS25895 PF00313 'Cold-shock' DNA-binding domain KM404_RS25905 PF04851 Type III restriction enzyme, res subunit KM404_RS25905 PF00271 Helicase conserved C-terminal domain KM404_RS25910 PF01476 LysM domain KM404_RS25910 PF00877 NlpC/P60 family KM404_RS25915 PF01638 HxlR-like helix-turn-helix KM404_RS25920 PF02645 Uncharacterised protein, DegV family COG1307 KM404_RS25925 PF09186 Domain of unknown function (DUF1949) KM404_RS25925 PF01205 Uncharacterized protein family UPF0029 KM404_RS25930 PF03816 Cell envelope-related transcriptional attenuator domain KM404_RS25935 PF02350 UDP-N-acetylglucosamine 2-epimerase KM404_RS25940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM404_RS25940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM404_RS25940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM404_RS25945 PF00953 Glycosyl transferase family 4 KM404_RS25950 PF01522 Polysaccharide deacetylase KM404_RS25955 PF00158 Sigma-54 interaction domain KM404_RS25955 PF00874 PRD domain KM404_RS25955 PF03610 PTS system fructose IIA component KM404_RS25965 PF02417 Chromate transporter KM404_RS25970 PF04794 YdjC-like protein KM404_RS25975 PF02056 Family 4 glycosyl hydrolase KM404_RS25975 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM404_RS25980 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM404_RS25985 PF02378 Phosphotransferase system, EIIC KM404_RS25990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM404_RS26000 PF02675 S-adenosylmethionine decarboxylase KM404_RS26005 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM404_RS26010 PF02378 Phosphotransferase system, EIIC KM404_RS26015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM404_RS26020 PF00375 Sodium:dicarboxylate symporter family KM404_RS26030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM404_RS26040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM404_RS26040 PF03466 LysR substrate binding domain KM404_RS26060 PF01654 Cytochrome bd terminal oxidase subunit I KM404_RS26065 PF02322 Cytochrome bd terminal oxidase subunit II KM404_RS26070 PF02040 Arsenical pump membrane protein KM404_RS26075 PF01964 Radical SAM ThiC family KM404_RS26075 PF13667 ThiC-associated domain KM404_RS26080 PF02652 L-lactate permease KM404_RS26090 PF09988 Uncharacterized metal-binding protein (DUF2227) KM404_RS26100 PF00884 Sulfatase KM404_RS26105 PF01063 Amino-transferase class IV KM404_RS26115 PF07662 Na+ dependent nucleoside transporter C-terminus KM404_RS26115 PF01773 Na+ dependent nucleoside transporter N-terminus KM404_RS26130 PF02028 BCCT, betaine/carnitine/choline family transporter KM404_RS26135 PF01476 LysM domain KM404_RS26135 PF06725 3D domain KM404_RS26160 PF04434 SWIM zinc finger KM404_RS26165 PF12419 SNF2 Helicase protein KM404_RS26165 PF00271 Helicase conserved C-terminal domain KM404_RS26165 PF00176 SNF2 family N-terminal domain KM404_RS26195 PF04545 Sigma-70, region 4 KM404_RS26195 PF04542 Sigma-70 region 2 KM404_RS26200 PF04893 Yip1 domain KM404_RS26205 PF12704 MacB-like periplasmic core domain KM404_RS26205 PF02687 FtsX-like permease family KM404_RS26210 PF00005 ABC transporter KM404_RS26230 PF07690 Major Facilitator Superfamily KM404_RS26245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS26245 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS26245 PF00989 PAS fold KM404_RS26245 PF16736 Single Cache-like KM404_RS26250 PF00072 Response regulator receiver domain KM404_RS26250 PF00486 Transcriptional regulatory protein, C terminal KM404_RS26255 PF16363 GDP-mannose 4,6 dehydratase KM404_RS26260 PF03816 Cell envelope-related transcriptional attenuator domain KM404_RS26270 PF07977 FabA-like domain KM404_RS26275 PF02350 UDP-N-acetylglucosamine 2-epimerase KM404_RS26280 PF00005 ABC transporter KM404_RS26280 PF08239 Bacterial SH3 domain KM404_RS26285 PF01061 ABC-2 type transporter KM404_RS26290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM404_RS26290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM404_RS26290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM404_RS26335 PF12116 Stage III sporulation protein D KM404_RS26350 PF01551 Peptidase family M23 KM404_RS26360 PF00005 ABC transporter KM404_RS26370 PF08486 Stage II sporulation protein KM404_RS26375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM404_RS26385 PF06612 Protein of unknown function (DUF1146) KM404_RS26390 PF00361 Proton-conducting membrane transporter KM404_RS26395 PF00361 Proton-conducting membrane transporter KM404_RS26400 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM404_RS26400 PF00361 Proton-conducting membrane transporter KM404_RS26400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM404_RS26405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM404_RS26410 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM404_RS26420 PF00146 NADH dehydrogenase KM404_RS26425 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM404_RS26430 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM404_RS26435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM404_RS26440 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM404_RS26445 PF03707 Bacterial signalling protein N terminal repeat KM404_RS26445 PF00563 EAL domain KM404_RS26445 PF00990 Diguanylate cyclase, GGDEF domain KM404_RS26460 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM404_RS26460 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM404_RS26465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM404_RS26465 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM404_RS26470 PF00231 ATP synthase KM404_RS26475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM404_RS26475 PF00306 ATP synthase alpha/beta chain, C terminal domain KM404_RS26475 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM404_RS26480 PF00213 ATP synthase delta (OSCP) subunit KM404_RS26485 PF00430 ATP synthase B/B' CF(0) KM404_RS26490 PF00137 ATP synthase subunit C KM404_RS26495 PF00119 ATP synthase A chain KM404_RS26500 PF03899 ATP synthase I chain KM404_RS26520 PF00464 Serine hydroxymethyltransferase KM404_RS26525 PF04260 Protein of unknown function (DUF436) KM404_RS26530 PF02502 Ribose/Galactose Isomerase KM404_RS26535 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM404_RS26540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM404_RS26545 PF07681 DoxX KM404_RS26550 PF01613 Flavin reductase like domain KM404_RS26560 PF02659 Putative manganese efflux pump KM404_RS26565 PF01300 Telomere recombination KM404_RS26565 PF03481 Putative GTP-binding controlling metal-binding KM404_RS26575 PF09551 Stage II sporulation protein R (spore_II_R) KM404_RS26580 PF13847 Methyltransferase domain KM404_RS26580 PF17827 PrmC N-terminal domain KM404_RS26585 PF03462 PCRF domain KM404_RS26585 PF00472 RF-1 domain KM404_RS26590 PF00265 Thymidine kinase KM404_RS26595 PF01197 Ribosomal protein L31 KM404_RS26600 PF07497 Rho termination factor, RNA-binding domain KM404_RS26600 PF07498 Rho termination factor, N-terminal domain KM404_RS26600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM404_RS26605 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM404_RS26610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM404_RS26615 PF01116 Fructose-bisphosphate aldolase class-II KM404_RS26620 PF00072 Response regulator receiver domain KM404_RS26625 PF10740 Domain of unknown function (DUF2529) KM404_RS26630 PF06418 CTP synthase N-terminus KM404_RS26630 PF00117 Glutamine amidotransferase class-I KM404_RS26635 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM404_RS26645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM404_RS26645 PF02770 Acyl-CoA dehydrogenase, middle domain KM404_RS26645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM404_RS26650 PF02770 Acyl-CoA dehydrogenase, middle domain KM404_RS26650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM404_RS26650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM404_RS26655 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM404_RS26655 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM404_RS26660 PF02803 Thiolase, C-terminal domain KM404_RS26660 PF00108 Thiolase, N-terminal domain KM404_RS26665 PF02754 Cysteine-rich domain KM404_RS26665 PF13183 4Fe-4S dicluster domain KM404_RS26670 PF13091 PLD-like domain KM404_RS26675 PF03851 UV-endonuclease UvdE KM404_RS26680 PF03707 Bacterial signalling protein N terminal repeat KM404_RS26680 PF00990 Diguanylate cyclase, GGDEF domain KM404_RS26680 PF00563 EAL domain KM404_RS26700 PF00196 Bacterial regulatory proteins, luxR family KM404_RS26700 PF00072 Response regulator receiver domain KM404_RS26705 PF07730 Histidine kinase KM404_RS26705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS26715 PF00005 ABC transporter KM404_RS26720 PF00557 Metallopeptidase family M24 KM404_RS26730 PF02225 PA domain KM404_RS26730 PF04389 Peptidase family M28 KM404_RS26750 PF04542 Sigma-70 region 2 KM404_RS26750 PF08281 Sigma-70, region 4 KM404_RS26755 PF03485 Arginyl tRNA synthetase N terminal domain KM404_RS26755 PF05746 DALR anticodon binding domain KM404_RS26755 PF00750 tRNA synthetases class I (R) KM404_RS26760 PF09148 Domain of unknown function (DUF1934) KM404_RS26765 PF17676 LD-carboxypeptidase C-terminal domain KM404_RS26765 PF02016 LD-carboxypeptidase N-terminal domain KM404_RS26780 PF00491 Arginase family KM404_RS26785 PF17284 Spermidine synthase tetramerisation domain KM404_RS26790 PF07690 Major Facilitator Superfamily KM404_RS26795 PF13411 MerR HTH family regulatory protein KM404_RS26800 PF03009 Glycerophosphoryl diester phosphodiesterase family KM404_RS26805 PF00912 Transglycosylase KM404_RS26805 PF00905 Penicillin binding protein transpeptidase domain KM404_RS26810 PF08741 YwhD family KM404_RS26815 PF02163 Peptidase family M50 KM404_RS26820 PF01361 Tautomerase enzyme KM404_RS26825 PF01966 HD domain KM404_RS26830 PF01497 Periplasmic binding protein KM404_RS26835 PF00005 ABC transporter KM404_RS26840 PF01032 FecCD transport family KM404_RS26850 PF07293 Protein of unknown function (DUF1450) KM404_RS26865 PF03099 Biotin/lipoate A/B protein ligase family KM404_RS26870 PF01515 Phosphate acetyl/butaryl transferase KM404_RS26875 PF06778 Chlorite dismutase KM404_RS26880 PF07943 Penicillin-binding protein 5, C-terminal domain KM404_RS26880 PF00768 D-alanyl-D-alanine carboxypeptidase KM404_RS26885 PF07486 Cell Wall Hydrolase KM404_RS26890 PF09671 Spore coat protein (Spore_GerQ) KM404_RS26895 PF04241 Protein of unknown function (DUF423) KM404_RS26905 PF07885 Ion channel KM404_RS26905 PF02254 TrkA-N domain KM404_RS26910 PF00860 Permease family KM404_RS26920 PF12823 Domain of unknown function (DUF3817) KM404_RS26925 PF03167 Uracil DNA glycosylase superfamily KM404_RS26930 PF12679 ABC-2 family transporter protein KM404_RS26935 PF00005 ABC transporter KM404_RS26940 PF13472 GDSL-like Lipase/Acylhydrolase family KM404_RS26945 PF00356 Bacterial regulatory proteins, lacI family KM404_RS26945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM404_RS26955 PF00742 Homoserine dehydrogenase KM404_RS26955 PF03447 Homoserine dehydrogenase, NAD binding domain KM404_RS26955 PF01842 ACT domain KM404_RS26960 PF04204 Homoserine O-succinyltransferase KM404_RS26965 PF01053 Cys/Met metabolism PLP-dependent enzyme KM404_RS26975 PF13419 Haloacid dehalogenase-like hydrolase KM404_RS26980 PF00027 Cyclic nucleotide-binding domain KM404_RS26985 PF02525 Flavodoxin-like fold KM404_RS26990 PF00196 Bacterial regulatory proteins, luxR family KM404_RS26990 PF00072 Response regulator receiver domain KM404_RS27000 PF08543 Phosphomethylpyrimidine kinase KM404_RS27005 PF07694 5TMR of 5TMR-LYT KM404_RS27005 PF00990 Diguanylate cyclase, GGDEF domain KM404_RS27010 PF04328 Selenoprotein, putative KM404_RS27015 PF13722 5TM C-terminal transporter carbon starvation CstA KM404_RS27015 PF02554 Carbon starvation protein CstA KM404_RS27020 PF00072 Response regulator receiver domain KM404_RS27020 PF04397 LytTr DNA-binding domain KM404_RS27025 PF07690 Major Facilitator Superfamily KM404_RS27030 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM404_RS27045 PF03458 UPF0126 domain KM404_RS27050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM404_RS27060 PF03061 Thioesterase superfamily KM404_RS27070 PF00535 Glycosyl transferase family 2 KM404_RS27075 PF00005 ABC transporter KM404_RS27075 PF12848 ABC transporter KM404_RS27095 PF00535 Glycosyl transferase family 2 KM404_RS27100 PF00440 Bacterial regulatory proteins, tetR family KM404_RS27105 PF00873 AcrB/AcrD/AcrF family KM404_RS27110 PF01625 Peptide methionine sulfoxide reductase KM404_RS27110 PF01641 SelR domain KM404_RS27115 PF01594 AI-2E family transporter KM404_RS27120 PF04172 LrgB-like family KM404_RS27125 PF03788 LrgA family KM404_RS27130 PF00072 Response regulator receiver domain KM404_RS27130 PF04397 LytTr DNA-binding domain KM404_RS27135 PF13492 GAF domain KM404_RS27135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS27135 PF06580 Histidine kinase KM404_RS27135 PF07694 5TMR of 5TMR-LYT KM404_RS27140 PF07690 Major Facilitator Superfamily KM404_RS27145 PF02028 BCCT, betaine/carnitine/choline family transporter KM404_RS27150 PF02898 Nitric oxide synthase, oxygenase domain KM404_RS27155 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM404_RS27155 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM404_RS27165 PF02293 AmiS/UreI family transporter KM404_RS27175 PF16363 GDP-mannose 4,6 dehydratase KM404_RS27180 PF03006 Haemolysin-III related KM404_RS27190 PF00270 DEAD/DEAH box helicase KM404_RS27190 PF03880 DbpA RNA binding domain KM404_RS27190 PF00271 Helicase conserved C-terminal domain KM404_RS27200 PF00478 IMP dehydrogenase / GMP reductase domain KM404_RS27205 PF01432 Peptidase family M3 KM404_RS27205 PF08439 Oligopeptidase F KM404_RS27215 PF02590 Predicted SPOUT methyltransferase KM404_RS27225 PF13180 PDZ domain KM404_RS27230 PF00753 Metallo-beta-lactamase superfamily KM404_RS27235 PF09648 YycH protein KM404_RS27240 PF07435 YycH protein KM404_RS27245 PF00672 HAMP domain KM404_RS27245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM404_RS27245 PF00512 His Kinase A (phospho-acceptor) domain KM404_RS27245 PF13426 PAS domain KM404_RS27250 PF00072 Response regulator receiver domain KM404_RS27250 PF00486 Transcriptional regulatory protein, C terminal KM404_RS27275 PF00709 Adenylosuccinate synthetase KM404_RS27280 PF03796 DnaB-like helicase C terminal domain KM404_RS27280 PF00772 DnaB-like helicase N terminal domain KM404_RS27285 PF01281 Ribosomal protein L9, N-terminal domain KM404_RS27285 PF03948 Ribosomal protein L9, C-terminal domain KM404_RS27290 PF02272 DHHA1 domain KM404_RS27290 PF01368 DHH family KM404_RS27295 PF09991 Predicted membrane protein (DUF2232) KM404_RS27300 PF01084 Ribosomal protein S18 KM404_RS27305 PF00436 Single-strand binding protein family KM404_RS27310 PF01250 Ribosomal protein S6 KM404_RS27315 PF06071 Protein of unknown function (DUF933) KM404_RS27315 PF01926 50S ribosome-binding GTPase KM404_RS27320 PF06107 Bacterial protein of unknown function (DUF951) KM404_RS27325 PF00924 Mechanosensitive ion channel KM404_RS27330 PF06866 Protein of unknown function (DUF1256) KM404_RS27335 PF17762 HTH domain found in ParB protein KM404_RS27335 PF02195 ParB-like nuclease domain KM404_RS27340 PF13614 AAA domain KM404_RS27345 PF17762 HTH domain found in ParB protein KM404_RS27345 PF02195 ParB-like nuclease domain KM404_RS27350 PF02527 rRNA small subunit methyltransferase G KM404_RS27355 PF01134 Glucose inhibited division protein A KM404_RS27355 PF13932 GidA associated domain KM404_RS27360 PF12631 MnmE helical domain KM404_RS27360 PF01926 50S ribosome-binding GTPase KM404_RS27360 PF10396 GTP-binding protein TrmE N-terminus KM404_RS27365 PF14804 Jag N-terminus KM404_RS27365 PF01424 R3H domain KM404_RS27370 PF02096 60Kd inner membrane protein KM404_RS27375 PF00825 Ribonuclease P KM404_RS27380 PF00468 Ribosomal protein L34 KM404_RS27395 PF08378 Nuclease-related domain KM404_RS27435 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM404_RS27515 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM404_RS27565 PF13427 Domain of unknown function (DUF4111) KM404_RS27565 PF18765 Polymerase beta, Nucleotidyltransferase KM404_RS27595 PF01609 Transposase DDE domain KM404_RS27600 PF01609 Transposase DDE domain KM404_RS27625 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM404_RS27625 PF17854 FtsK alpha domain KM404_RS27625 PF09397 Ftsk gamma domain KM404_RS27625 PF01580 FtsK/SpoIIIE family KM404_RS27640 PF00091 Tubulin/FtsZ family, GTPase domain KM404_RS27720 PF00437 Type II/IV secretion system protein KM404_RS27840 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) KM404_RS27855 PF04235 Protein of unknown function (DUF418) KM404_RS27875 PF00395 S-layer homology domain KM404_RS27880 PF01569 PAP2 superfamily KM404_RS27900 PF00483 Nucleotidyl transferase KM404_RS27905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM404_RS27905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM404_RS27905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM404_RS27950 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM404_RS27950 PF03497 Anthrax toxin LF subunit KM404_RS27975 PF08279 HTH domain KM404_RS27975 PF05043 Mga helix-turn-helix domain KM404_RS27975 PF00874 PRD domain KM404_RS27980 PF09385 Histidine kinase N terminal KM404_RS28000 PF01526 Tn3 transposase DDE domain KM404_RS28000 PF13700 Domain of unknown function (DUF4158) KM404_RS28005 PF00239 Resolvase, N terminal domain KM404_RS28005 PF02796 Helix-turn-helix domain of resolvase KM404_RS28010 PF03845 Spore germination protein KM404_RS28015 PF03323 Bacillus/Clostridium GerA spore germination protein KM404_RS28020 PF05504 Spore germination B3/ GerAC like, C-terminal KM404_RS28030 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain KM404_RS28030 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 KM404_RS28030 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 KM404_RS28030 PF07691 PA14 domain KM404_RS28035 PF01022 Bacterial regulatory protein, arsR family KM404_RS28055 PF09156 Anthrax toxin lethal factor, middle domain KM404_RS28055 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM404_RS28075 PF18277 AbrB C-terminal domain KM404_RS28075 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM404_RS28085 PF02899 Phage integrase, N-terminal SAM-like domain KM404_RS28085 PF00589 Phage integrase family KM404_RS28120 PF04740 LXG domain of WXG superfamily KM404_RS28120 PF14436 Bacterial EndoU nuclease KM404_RS28145 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM404_RS28155 PF00589 Phage integrase family KM404_RS28180 PF18801 response regulator aspartate phosphatase H, N terminal KM404_RS28190 PF17209 Hfq protein KM404_RS28195 PF01022 Bacterial regulatory protein, arsR family KM404_RS28200 PF02600 Disulfide bond formation protein DsbB KM404_RS28215 PF00565 Staphylococcal nuclease homologue KM404_RS28220 PF13342 C-terminal repeat of topoisomerase KM404_RS28220 PF01751 Toprim domain KM404_RS28220 PF01131 DNA topoisomerase KM404_RS28235 PF08708 Primase C terminal 1 (PriCT-1) KM404_RS28260 PF17362 Family of unknown function KM404_RS28275 PF17631 Family of unknown function (DUF5512) KM404_RS28310 PF00437 Type II/IV secretion system protein KM404_RS28340 PF04956 TrbC/VIRB2 family KM404_RS28385 PF00877 NlpC/P60 family KM404_RS28395 PF17632 Family of unknown function (DUF5513) KM404_RS28420 PF17633 Family of unknown function (DUF5514) KM404_RS28425 PF17630 Family of unknown function (DUF5511) KM404_RS28430 PF18840 Large polyvalent protein associated domain 25 KM404_RS28445 PF13154 Protein of unknown function (DUF3991) KM404_RS28485 PF17443 Uncharacterized protein pXO2-72 KM404_RS28505 PF11798 IMS family HHH motif KM404_RS28505 PF11799 impB/mucB/samB family C-terminal domain KM404_RS28505 PF00817 impB/mucB/samB family KM404_RS28510 PF13152 Protein of unknown function (DUF3967) KM404_RS28510 PF13411 MerR HTH family regulatory protein KM404_RS28515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM404_RS28545 PF00874 PRD domain KM404_RS28545 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM404_RS28545 PF05043 Mga helix-turn-helix domain KM404_RS28560 PF01810 LysE type translocator KM404_RS28565 PF00874 PRD domain KM404_RS28565 PF05043 Mga helix-turn-helix domain KM404_RS28565 PF08279 HTH domain KM404_RS28570 PF00874 PRD domain KM404_RS28570 PF08279 HTH domain KM404_RS28570 PF05043 Mga helix-turn-helix domain KM404_RS28575 PF09385 Histidine kinase N terminal KM404_RS28585 PF10502 Signal peptidase, peptidase S26 KM404_RS28600 PF01022 Bacterial regulatory protein, arsR family KM404_RS28610 PF08245 Mur ligase middle domain KM404_RS28615 PF14102 Capsule biosynthesis CapC KM404_RS28620 PF09587 Bacterial capsule synthesis protein PGA_cap KM404_RS28640 PF05043 Mga helix-turn-helix domain KM404_RS28640 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM404_RS28660 PF00440 Bacterial regulatory proteins, tetR family KM404_RS28665 PF04463 Protein of unknown function (DUF523) KM404_RS28670 PF02517 CPBP intramembrane metalloprotease KM404_RS28675 PF01906 Putative heavy-metal-binding KM404_RS28695 PF01520 N-acetylmuramoyl-L-alanine amidase KM404_RS28695 PF00395 S-layer homology domain KM404_RS28710 PF13614 AAA domain