locus-tag	class	description
C3496_RS00010	PF16916	Dimerisation domain of Zinc Transporter
C3496_RS00010	PF01545	Cation efflux family
C3496_RS00015	PF02355	Protein export membrane protein
C3496_RS00015	PF07549	SecD/SecF GG Motif
C3496_RS00020	PF13797	Post-transcriptional regulator
C3496_RS00025	PF14667	Polysaccharide biosynthesis C-terminal domain
C3496_RS00025	PF01943	Polysaccharide biosynthesis protein
C3496_RS00030	PF04239	Protein of unknown function (DUF421)
C3496_RS00040	PF02699	Preprotein translocase subunit
C3496_RS00045	PF01702	Queuine tRNA-ribosyltransferase
C3496_RS00050	PF02547	Queuosine biosynthesis protein
C3496_RS00055	PF11146	Protein of unknown function (DUF2905)
C3496_RS00060	PF17864	RuvB AAA lid domain
C3496_RS00060	PF05491	RuvB C-terminal winged helix domain
C3496_RS00060	PF05496	Holliday junction DNA helicase RuvB P-loop domain
C3496_RS00065	PF01330	RuvA N terminal domain
C3496_RS00065	PF07499	RuvA, C-terminal domain
C3496_RS00070	PF01497	Periplasmic binding protein
C3496_RS00080	PF00892	EamA-like transporter family
C3496_RS00085	PF01022	Bacterial regulatory protein, arsR family
C3496_RS00100	PF01476	LysM domain
C3496_RS00105	PF02445	Quinolinate synthetase A protein
C3496_RS00110	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
C3496_RS00110	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
C3496_RS00115	PF00890	FAD binding domain
C3496_RS00115	PF02910	Fumarate reductase flavoprotein C-term
C3496_RS00120	PF00266	Aminotransferase class-V
C3496_RS00125	PF08279	HTH domain
C3496_RS00125	PF02829	3H domain
C3496_RS00130	PF03473	MOSC domain
C3496_RS00130	PF03475	3-alpha domain
C3496_RS00135	PF00800	Prephenate dehydratase
C3496_RS00135	PF01842	ACT domain
C3496_RS00140	PF02687	FtsX-like permease family
C3496_RS00145	PF02687	FtsX-like permease family
C3496_RS00150	PF00005	ABC transporter
C3496_RS00155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS00160	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS00160	PF00072	Response regulator receiver domain
C3496_RS00165	PF01018	GTP1/OBG
C3496_RS00165	PF09269	Domain of unknown function (DUF1967)
C3496_RS00165	PF01926	50S ribosome-binding GTPase
C3496_RS00170	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
C3496_RS00170	PF14682	Sporulation initiation phospho-transferase B, C-terminal
C3496_RS00175	PF01016	Ribosomal L27 protein
C3496_RS00180	PF04327	Cysteine protease Prp
C3496_RS00185	PF00829	Ribosomal prokaryotic L21 protein
C3496_RS00190	PF10150	Ribonuclease E/G family
C3496_RS00190	PF00575	S1 RNA binding domain
C3496_RS00195	PF02163	Peptidase family M50
C3496_RS00200	PF01551	Peptidase family M23
C3496_RS00205	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
C3496_RS00210	PF03775	Septum formation inhibitor MinC, C-terminal domain
C3496_RS00220	PF04085	rod shape-determining protein MreC
C3496_RS00230	PF04002	RadC-like JAB domain
C3496_RS00235	PF02545	Maf-like protein
C3496_RS00245	PF02875	Mur ligase family, glutamate ligase domain
C3496_RS00245	PF08245	Mur ligase middle domain
C3496_RS00250	PF00133	tRNA synthetases class I (I, L, M and V)
C3496_RS00250	PF08264	Anticodon-binding domain of tRNA
C3496_RS00250	PF10458	Valyl tRNA synthetase tRNA binding arm
C3496_RS00260	PF01476	LysM domain
C3496_RS00265	PF00202	Aminotransferase class-III
C3496_RS00270	PF00490	Delta-aminolevulinic acid dehydratase
C3496_RS00275	PF02602	Uroporphyrinogen-III synthase HemD
C3496_RS00280	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
C3496_RS00280	PF03900	Porphobilinogen deaminase, C-terminal domain
C3496_RS00285	PF01578	Cytochrome C assembly protein
C3496_RS00290	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
C3496_RS00290	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
C3496_RS00290	PF01488	Shikimate / quinate 5-dehydrogenase
C3496_RS00295	PF01047	MarR family
C3496_RS00300	PF02566	OsmC-like protein
C3496_RS00305	PF01926	50S ribosome-binding GTPase
C3496_RS00310	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
C3496_RS00310	PF05362	Lon protease (S16) C-terminal proteolytic domain
C3496_RS00310	PF00004	ATPase family associated with various cellular activities (AAA)
C3496_RS00315	PF05362	Lon protease (S16) C-terminal proteolytic domain
C3496_RS00315	PF00004	ATPase family associated with various cellular activities (AAA)
C3496_RS00320	PF07724	AAA domain (Cdc48 subfamily)
C3496_RS00320	PF06689	ClpX C4-type zinc finger
C3496_RS00320	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3496_RS00325	PF05697	Bacterial trigger factor protein (TF)
C3496_RS00325	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
C3496_RS00325	PF05698	Bacterial trigger factor protein (TF) C-terminus
C3496_RS00345	PF08000	Bacterial PH domain
C3496_RS00345	PF11724	YvbH-like oligomerisation region
C3496_RS00360	PF12850	Calcineurin-like phosphoesterase superfamily domain
C3496_RS00365	PF01725	Ham1 family
C3496_RS00370	PF01138	3' exoribonuclease family, domain 1
C3496_RS00370	PF03725	3' exoribonuclease family, domain 2
C3496_RS00375	PF10646	Sporulation and spore germination
C3496_RS00380	PF01177	Asp/Glu/Hydantoin racemase
C3496_RS00385	PF07690	Major Facilitator Superfamily
C3496_RS00395	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS00400	PF01965	DJ-1/PfpI family
C3496_RS00410	PF00196	Bacterial regulatory proteins, luxR family
C3496_RS00430	PF02374	Anion-transporting ATPase
C3496_RS00435	PF06953	Arsenical resistance operon trans-acting repressor ArsD
C3496_RS00440	PF01451	Low molecular weight phosphotyrosine protein phosphatase
C3496_RS00445	PF01022	Bacterial regulatory protein, arsR family
C3496_RS00455	PF01758	Sodium Bile acid symporter family
C3496_RS00470	PF01297	Zinc-uptake complex component A periplasmic
C3496_RS00475	PF00950	ABC 3 transport family
C3496_RS00480	PF00005	ABC transporter
C3496_RS00485	PF01022	Bacterial regulatory protein, arsR family
C3496_RS00490	PF00403	Heavy-metal-associated domain
C3496_RS00495	PF02630	SCO1/SenC
C3496_RS00500	PF13462	Thioredoxin
C3496_RS00505	PF02600	Disulfide bond formation protein DsbB
C3496_RS00535	PF02272	DHHA1 domain
C3496_RS00535	PF17768	RecJ OB domain
C3496_RS00535	PF01368	DHH family
C3496_RS00535	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
C3496_RS00545	PF00196	Bacterial regulatory proteins, luxR family
C3496_RS00550	PF00860	Permease family
C3496_RS00555	PF07969	Amidohydrolase family
C3496_RS00565	PF01381	Helix-turn-helix
C3496_RS00565	PF07883	Cupin domain
C3496_RS00570	PF13536	Putative multidrug resistance efflux transporter
C3496_RS00575	PF00230	Major intrinsic protein
C3496_RS00580	PF02082	Transcriptional regulator
C3496_RS00590	PF13732	Domain of unknown function (DUF4162)
C3496_RS00590	PF00005	ABC transporter
C3496_RS00595	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
C3496_RS00600	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
C3496_RS00600	PF00691	OmpA family
C3496_RS00605	PF01618	MotA/TolQ/ExbB proton channel family
C3496_RS00610	PF02557	D-alanyl-D-alanine carboxypeptidase
C3496_RS00615	PF03061	Thioesterase superfamily
C3496_RS00620	PF13085	2Fe-2S iron-sulfur cluster binding domain
C3496_RS00620	PF13183	4Fe-4S dicluster domain
C3496_RS00625	PF00890	FAD binding domain
C3496_RS00625	PF02910	Fumarate reductase flavoprotein C-term
C3496_RS00630	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
C3496_RS00635	PF10702	Protein of unknown function (DUF2507)
C3496_RS00640	PF08459	UvrC Helix-hairpin-helix N-terminal
C3496_RS00640	PF02151	UvrB/uvrC motif
C3496_RS00640	PF01541	GIY-YIG catalytic domain
C3496_RS00645	PF00085	Thioredoxin
C3496_RS00650	PF00766	Electron transfer flavoprotein FAD-binding domain
C3496_RS00650	PF01012	Electron transfer flavoprotein domain
C3496_RS00655	PF01012	Electron transfer flavoprotein domain
C3496_RS00660	PF00378	Enoyl-CoA hydratase/isomerase
C3496_RS00665	PF08359	YsiA-like protein, C-terminal region
C3496_RS00665	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS00670	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS00670	PF00501	AMP-binding enzyme
C3496_RS00680	PF05163	DinB family
C3496_RS00705	PF00005	ABC transporter
C3496_RS00710	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS00710	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS00715	PF00072	Response regulator receiver domain
C3496_RS00715	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS00725	PF09962	Uncharacterized conserved protein (DUF2196)
C3496_RS00730	PF10672	S-adenosylmethionine-dependent methyltransferase
C3496_RS00730	PF17785	PUA-like domain
C3496_RS00740	PF03992	Antibiotic biosynthesis monooxygenase
C3496_RS00745	PF04203	Sortase domain
C3496_RS00750	PF00005	ABC transporter
C3496_RS00755	PF01032	FecCD transport family
C3496_RS00760	PF01497	Periplasmic binding protein
C3496_RS00765	PF05031	Iron Transport-associated domain 
C3496_RS00770	PF05031	Iron Transport-associated domain 
C3496_RS00775	PF05525	Branched-chain amino acid transport protein
C3496_RS00780	PF01479	S4 domain
C3496_RS00780	PF00849	RNA pseudouridylate synthase
C3496_RS00785	PF01713	Smr domain
C3496_RS00785	PF00488	MutS domain V
C3496_RS00790	PF14716	Helix-hairpin-helix domain
C3496_RS00790	PF02811	PHP domain
C3496_RS00790	PF14791	DNA polymerase beta thumb 
C3496_RS00795	PF02674	Colicin V production protein
C3496_RS00800	PF05164	Cell division protein ZapA
C3496_RS00805	PF01351	Ribonuclease HII
C3496_RS00805	PF11858	Domain of unknown function (DUF3378)
C3496_RS00825	PF01336	OB-fold nucleic acid binding domain
C3496_RS00825	PF00152	tRNA synthetases class II (D, K and N) 
C3496_RS00830	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
C3496_RS00830	PF01588	Putative tRNA binding domain
C3496_RS00830	PF03147	Ferredoxin-fold anticodon binding domain
C3496_RS00830	PF03484	tRNA synthetase B5 domain
C3496_RS00830	PF03483	B3/4 domain
C3496_RS00835	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
C3496_RS00835	PF01409	tRNA synthetases class II core domain (F)
C3496_RS00840	PF00588	SpoU rRNA Methylase family
C3496_RS00840	PF08032	RNA 2'-O ribose methyltransferase substrate binding
C3496_RS00845	PF14098	Small, acid-soluble spore protein I
C3496_RS00850	PF01966	HD domain
C3496_RS00860	PF07690	Major Facilitator Superfamily
C3496_RS00870	PF16859	Tetracyclin repressor-like, C-terminal domain
C3496_RS00870	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS00875	PF05343	M42 glutamyl aminopeptidase
C3496_RS00885	PF00453	Ribosomal protein L20
C3496_RS00890	PF01632	Ribosomal protein L35
C3496_RS00895	PF05198	Translation initiation factor IF-3, N-terminal domain
C3496_RS00895	PF00707	Translation initiation factor IF-3, C-terminal domain
C3496_RS00900	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3496_RS00900	PF03129	Anticodon binding domain
C3496_RS00900	PF02824	TGS domain
C3496_RS00900	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3496_RS00905	PF08812	YtxC-like family
C3496_RS00910	PF07319	Primosomal protein DnaI N-terminus
C3496_RS00910	PF01695	IstB-like ATP binding protein
C3496_RS00915	PF07261	Replication initiation and membrane attachment
C3496_RS00920	PF03477	ATP cone domain
C3496_RS00925	PF02675	S-adenosylmethionine decarboxylase 
C3496_RS00930	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
C3496_RS00930	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C3496_RS00935	PF01121	Dephospho-CoA kinase
C3496_RS00940	PF02659	Putative manganese efflux pump
C3496_RS00945	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
C3496_RS00945	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
C3496_RS00945	PF06827	Zinc finger found in FPG and IleRS
C3496_RS00950	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
C3496_RS00950	PF00476	DNA polymerase family A
C3496_RS00950	PF01367	5'-3' exonuclease, C-terminal SAM fold
C3496_RS00955	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS00955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS00955	PF00989	PAS fold
C3496_RS00955	PF16736	Single Cache-like 
C3496_RS00960	PF00072	Response regulator receiver domain
C3496_RS00960	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS00975	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
C3496_RS00975	PF00056	lactate/malate dehydrogenase, NAD binding domain
C3496_RS00980	PF00180	Isocitrate/isopropylmalate dehydrogenase
C3496_RS00985	PF00285	Citrate synthase, C-terminal domain
C3496_RS00990	PF04284	Protein of unknown function (DUF441)
C3496_RS00995	PF01594	AI-2E family transporter
C3496_RS01000	PF04186	FxsA cytoplasmic membrane protein 
C3496_RS01005	PF02887	Pyruvate kinase, alpha/beta domain
C3496_RS01005	PF00224	Pyruvate kinase, barrel domain
C3496_RS01005	PF00391	PEP-utilising enzyme, mobile domain
C3496_RS01010	PF00365	Phosphofructokinase
C3496_RS01015	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
C3496_RS01020	PF01039	Carboxyl transferase domain
C3496_RS01020	PF17848	Acetyl-coA carboxylase zinc finger domain
C3496_RS01025	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS01030	PF00390	Malic enzyme, N-terminal domain
C3496_RS01030	PF03949	Malic enzyme, NAD binding domain
C3496_RS01035	PF02811	PHP domain
C3496_RS01035	PF01336	OB-fold nucleic acid binding domain
C3496_RS01035	PF14579	Helix-hairpin-helix motif
C3496_RS01035	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
C3496_RS01035	PF07733	Bacterial DNA polymerase III alpha NTPase domain
C3496_RS01040	PF14034	Sporulation protein YtrH
C3496_RS01050	PF02272	DHHA1 domain
C3496_RS01050	PF01368	DHH family
C3496_RS01055	PF14007	YtpI-like protein
C3496_RS01070	PF00571	CBS domain
C3496_RS01070	PF03061	Thioesterase superfamily
C3496_RS01070	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS01070	PF07085	DRTGG domain
C3496_RS01085	PF00557	Metallopeptidase family M24
C3496_RS01085	PF01321	Creatinase/Prolidase N-terminal domain
C3496_RS01115	PF04542	Sigma-70 region 2 
C3496_RS01115	PF08281	Sigma-70, region 4
C3496_RS01130	PF07883	Cupin domain
C3496_RS01140	PF01381	Helix-turn-helix
C3496_RS01150	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
C3496_RS01150	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
C3496_RS01160	PF00582	Universal stress protein family
C3496_RS01185	PF14698	Argininosuccinate lyase C-terminal
C3496_RS01185	PF00206	Lyase
C3496_RS01190	PF00764	Arginosuccinate synthase
C3496_RS01205	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS01205	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3496_RS01210	PF12787	EcsC protein family
C3496_RS01220	PF00871	Acetokinase family
C3496_RS01225	PF02384	N-6 DNA Methylase
C3496_RS01230	PF08534	Redoxin
C3496_RS01235	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
C3496_RS01245	PF01513	ATP-NAD kinase
C3496_RS01250	PF07969	Amidohydrolase family
C3496_RS01260	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS01260	PF00501	AMP-binding enzyme
C3496_RS01265	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3496_RS01270	PF02568	Thiamine biosynthesis protein (ThiI)
C3496_RS01270	PF02926	THUMP domain
C3496_RS01275	PF00266	Aminotransferase class-V
C3496_RS01280	PF06160	Septation ring formation regulator, EzrA 
C3496_RS01285	PF03466	LysR substrate binding domain
C3496_RS01285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS01290	PF00892	EamA-like transporter family
C3496_RS01295	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS01300	PF13185	GAF domain
C3496_RS01305	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3496_RS01310	PF01479	S4 domain
C3496_RS01310	PF00163	Ribosomal protein S4/S9 N-terminal domain
C3496_RS01325	PF00579	tRNA synthetases class I (W and Y)
C3496_RS01325	PF01479	S4 domain
C3496_RS01335	PF08281	Sigma-70, region 4
C3496_RS01335	PF04542	Sigma-70 region 2 
C3496_RS01350	PF00501	AMP-binding enzyme
C3496_RS01350	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS01355	PF00583	Acetyltransferase (GNAT) family
C3496_RS01360	PF00571	CBS domain
C3496_RS01365	PF00850	Histone deacetylase domain
C3496_RS01380	PF00072	Response regulator receiver domain
C3496_RS01380	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS01385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS01385	PF00672	HAMP domain
C3496_RS01385	PF13426	PAS domain
C3496_RS01385	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS01390	PF12796	Ankyrin repeats (3 copies)
C3496_RS01395	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
C3496_RS01400	PF01741	Large-conductance mechanosensitive channel, MscL
C3496_RS01425	PF00356	Bacterial regulatory proteins, lacI family
C3496_RS01435	PF07537	CamS sex pheromone cAM373 precursor
C3496_RS01440	PF11009	Protein of unknown function (DUF2847)
C3496_RS01450	PF02073	Thermophilic metalloprotease (M29)
C3496_RS01470	PF13302	Acetyltransferase (GNAT) domain
C3496_RS01480	PF01225	Mur ligase family, catalytic domain
C3496_RS01480	PF08245	Mur ligase middle domain
C3496_RS01480	PF02875	Mur ligase family, glutamate ligase domain
C3496_RS01490	PF17854	FtsK alpha domain
C3496_RS01490	PF09397	Ftsk gamma domain
C3496_RS01490	PF01580	FtsK/SpoIIIE family
C3496_RS01505	PF01588	Putative tRNA binding domain
C3496_RS01505	PF14794	Domain of unknown function (DUF4479)
C3496_RS01510	PF07285	Protein of unknown function (DUF1444)
C3496_RS01515	PF00085	Thioredoxin
C3496_RS01520	PF01931	Protein of unknown function DUF84
C3496_RS01525	PF05343	M42 glutamyl aminopeptidase
C3496_RS01535	PF00753	Metallo-beta-lactamase superfamily
C3496_RS01540	PF02390	Putative methyltransferase 
C3496_RS01545	PF14165	YtzH-like protein
C3496_RS01550	PF01636	Phosphotransferase enzyme family
C3496_RS01555	PF00128	Alpha amylase, catalytic domain
C3496_RS01555	PF17999	Pullulanase N1-terminal domain
C3496_RS01555	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
C3496_RS01560	PF02834	LigT like Phosphoesterase
C3496_RS01565	PF01546	Peptidase family M20/M25/M40
C3496_RS01570	PF08220	DeoR-like helix-turn-helix domain
C3496_RS01575	PF00849	RNA pseudouridylate synthase
C3496_RS01575	PF01479	S4 domain
C3496_RS01580	PF01943	Polysaccharide biosynthesis protein
C3496_RS01580	PF14667	Polysaccharide biosynthesis C-terminal domain
C3496_RS01590	PF07690	Major Facilitator Superfamily
C3496_RS01595	PF01022	Bacterial regulatory protein, arsR family
C3496_RS01600	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
C3496_RS01610	PF10957	Sporulation protein Cse60 
C3496_RS01620	PF02559	CarD-like/TRCF domain
C3496_RS01630	PF06800	Sugar transport protein
C3496_RS01645	PF02391	MoaE protein
C3496_RS01650	PF12323	Helix-turn-helix domain
C3496_RS01650	PF01385	Probable transposase
C3496_RS01650	PF07282	Putative transposase DNA-binding domain
C3496_RS01660	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
C3496_RS01665	PF03453	MoeA N-terminal region (domain I and II)
C3496_RS01665	PF03454	MoeA C-terminal region (domain IV)
C3496_RS01665	PF00994	Probable molybdopterin binding domain
C3496_RS01670	PF01967	MoaC family
C3496_RS01675	PF00899	ThiF family
C3496_RS01680	PF06463	Molybdenum Cofactor Synthesis C
C3496_RS01680	PF04055	Radical SAM superfamily
C3496_RS01700	PF00581	Rhodanese-like domain
C3496_RS01710	PF00561	alpha/beta hydrolase fold
C3496_RS01715	PF03323	Bacillus/Clostridium GerA spore germination protein
C3496_RS01720	PF03845	Spore germination protein
C3496_RS01745	PF00133	tRNA synthetases class I (I, L, M and V)
C3496_RS01745	PF13603	Leucyl-tRNA synthetase, Domain 2
C3496_RS01745	PF09334	tRNA synthetases class I (M)
C3496_RS01745	PF08264	Anticodon-binding domain of tRNA
C3496_RS01750	PF07690	Major Facilitator Superfamily
C3496_RS01755	PF00999	Sodium/hydrogen exchanger family
C3496_RS01760	PF02080	TrkA-C domain
C3496_RS01765	PF00589	Phage integrase family
C3496_RS01775	PF00005	ABC transporter
C3496_RS01780	PF04235	Protein of unknown function (DUF418)
C3496_RS01780	PF07786	Protein of unknown function (DUF1624)
C3496_RS01795	PF16199	Radical_SAM C-terminal domain
C3496_RS01795	PF04055	Radical SAM superfamily
C3496_RS01800	PF06962	Putative rRNA methylase
C3496_RS01805	PF00005	ABC transporter
C3496_RS01815	PF01177	Asp/Glu/Hydantoin racemase
C3496_RS01830	PF10776	Protein of unknown function (DUF2600)
C3496_RS01835	PF12146	Serine aminopeptidase, S33
C3496_RS01840	PF00132	Bacterial transferase hexapeptide (six repeats)
C3496_RS01845	PF01569	PAP2 superfamily
C3496_RS01850	PF00534	Glycosyl transferases group 1
C3496_RS01850	PF13439	Glycosyltransferase Family 4
C3496_RS01855	PF12804	MobA-like NTP transferase domain
C3496_RS01860	PF00994	Probable molybdopterin binding domain
C3496_RS01875	PF13302	Acetyltransferase (GNAT) domain
C3496_RS01880	PF02772	S-adenosylmethionine synthetase, central domain
C3496_RS01880	PF02773	S-adenosylmethionine synthetase, C-terminal domain
C3496_RS01880	PF00438	S-adenosylmethionine synthetase, N-terminal domain
C3496_RS01885	PF01293	Phosphoenolpyruvate carboxykinase
C3496_RS01920	PF01784	NIF3 (NGG1p interacting factor 3)
C3496_RS01925	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS01925	PF00989	PAS fold
C3496_RS01925	PF13188	PAS domain
C3496_RS01925	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS01925	PF13426	PAS domain
C3496_RS01930	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS01930	PF08447	PAS fold
C3496_RS01930	PF00989	PAS fold
C3496_RS01930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS01935	PF00561	alpha/beta hydrolase fold
C3496_RS01935	PF08386	TAP-like protein
C3496_RS01960	PF00005	ABC transporter
C3496_RS01965	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS01985	PF00293	NUDIX domain
C3496_RS02005	PF02664	S-Ribosylhomocysteinase (LuxS)
C3496_RS02010	PF01809	Putative membrane protein insertion efficiency factor
C3496_RS02015	PF00484	Carbonic anhydrase
C3496_RS02020	PF01654	Cytochrome bd terminal oxidase subunit I
C3496_RS02025	PF02322	Cytochrome bd terminal oxidase subunit II
C3496_RS02030	PF10676	Spore germination protein gerPA/gerPF
C3496_RS02045	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS02045	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3496_RS02070	PF04012	PspA/IM30 family
C3496_RS02100	PF02421	Ferrous iron transport protein B
C3496_RS02100	PF07670	Nucleoside recognition
C3496_RS02100	PF07664	Ferrous iron transport protein B C terminus
C3496_RS02100	PF17910	FeoB cytosolic helical domain
C3496_RS02110	PF09515	Thiamine transporter protein (Thia_YuaJ)
C3496_RS02115	PF00672	HAMP domain
C3496_RS02115	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS02115	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS02120	PF00072	Response regulator receiver domain
C3496_RS02120	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS02145	PF00156	Phosphoribosyl transferase domain
C3496_RS02150	PF00781	Diacylglycerol kinase catalytic domain
C3496_RS02165	PF02687	FtsX-like permease family
C3496_RS02170	PF00005	ABC transporter
C3496_RS02180	PF00248	Aldo/keto reductase family
C3496_RS02195	PF09335	SNARE associated Golgi protein
C3496_RS02200	PF00398	Ribosomal RNA adenine dimethylase
C3496_RS02205	PF02311	AraC-like ligand binding domain
C3496_RS02205	PF12833	Helix-turn-helix domain
C3496_RS02215	PF02687	FtsX-like permease family
C3496_RS02220	PF00005	ABC transporter
C3496_RS02225	PF06445	GyrI-like small molecule binding domain
C3496_RS02225	PF12833	Helix-turn-helix domain
C3496_RS02235	PF00005	ABC transporter
C3496_RS02240	PF13630	SdpI/YhfL protein family
C3496_RS02240	PF07853	Protein of unknown function (DUF1648)
C3496_RS02245	PF01022	Bacterial regulatory protein, arsR family
C3496_RS02250	PF00072	Response regulator receiver domain
C3496_RS02250	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS02255	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS02260	PF02687	FtsX-like permease family
C3496_RS02265	PF02687	FtsX-like permease family
C3496_RS02270	PF00005	ABC transporter
C3496_RS02275	PF02687	FtsX-like permease family
C3496_RS02285	PF02447	GntP family permease
C3496_RS02290	PF07702	UTRA domain
C3496_RS02290	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS02300	PF07071	KDGP aldolase
C3496_RS02305	PF03841	L-seryl-tRNA selenium transferase
C3496_RS02310	PF01979	Amidohydrolase family
C3496_RS02315	PF02557	D-alanyl-D-alanine carboxypeptidase
C3496_RS02320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS02320	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS02325	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS02325	PF00072	Response regulator receiver domain
C3496_RS02330	PF13378	Enolase C-terminal domain-like
C3496_RS02330	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
C3496_RS02335	PF00501	AMP-binding enzyme
C3496_RS02335	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS02340	PF00378	Enoyl-CoA hydratase/isomerase
C3496_RS02345	PF00561	alpha/beta hydrolase fold
C3496_RS02350	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3496_RS02350	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3496_RS02350	PF16582	Middle domain of thiamine pyrophosphate
C3496_RS02355	PF00425	chorismate binding enzyme
C3496_RS02360	PF01040	UbiA prenyltransferase family
C3496_RS02365	PF01258	Prokaryotic dksA/traR C4-type zinc finger
C3496_RS02370	PF00313	'Cold-shock' DNA-binding domain
C3496_RS02385	PF00343	Carbohydrate phosphorylase
C3496_RS02390	PF08323	Starch synthase catalytic domain
C3496_RS02390	PF00534	Glycosyl transferases group 1
C3496_RS02395	PF00483	Nucleotidyl transferase
C3496_RS02400	PF00483	Nucleotidyl transferase
C3496_RS02405	PF02806	Alpha amylase, C-terminal all-beta domain
C3496_RS02405	PF00128	Alpha amylase, catalytic domain
C3496_RS02405	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
C3496_RS02415	PF00056	lactate/malate dehydrogenase, NAD binding domain
C3496_RS02415	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
C3496_RS02520	PF05697	Bacterial trigger factor protein (TF)
C3496_RS02520	PF05698	Bacterial trigger factor protein (TF) C-terminus
C3496_RS02555	PF02308	MgtC family
C3496_RS02560	PF07885	Ion channel
C3496_RS02560	PF02254	TrkA-N domain
C3496_RS02565	PF08868	YugN-like family
C3496_RS02570	PF00342	Phosphoglucose isomerase
C3496_RS02575	PF04070	Domain of unknown function (DUF378)
C3496_RS02580	PF00575	S1 RNA binding domain
C3496_RS02585	PF00155	Aminotransferase class I and II
C3496_RS02590	PF01037	Lrp/AsnC ligand binding domain
C3496_RS02595	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
C3496_RS02595	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3496_RS02600	PF08386	TAP-like protein
C3496_RS02600	PF00561	alpha/beta hydrolase fold
C3496_RS02610	PF00155	Aminotransferase class I and II
C3496_RS02625	PF08810	Kinase associated protein B
C3496_RS02630	PF00929	Exonuclease
C3496_RS02635	PF03600	Citrate transporter
C3496_RS02650	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3496_RS02650	PF03129	Anticodon binding domain
C3496_RS02655	PF03061	Thioesterase superfamily
C3496_RS02665	PF02632	BioY family
C3496_RS02670	PF03023	Lipid II flippase MurJ
C3496_RS02675	PF00534	Glycosyl transferases group 1
C3496_RS02675	PF13439	Glycosyltransferase Family 4
C3496_RS02695	PF09586	Bacterial membrane protein YfhO
C3496_RS02700	PF04138	GtrA-like protein
C3496_RS02705	PF00535	Glycosyl transferase family 2
C3496_RS02710	PF00483	Nucleotidyl transferase
C3496_RS02715	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
C3496_RS02715	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
C3496_RS02715	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
C3496_RS02715	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
C3496_RS02720	PF02457	DisA bacterial checkpoint controller nucleotide-binding
C3496_RS02720	PF10372	Bacterial membrane-spanning protein N-terminus
C3496_RS02730	PF00883	Cytosol aminopeptidase family, catalytic domain
C3496_RS02730	PF02789	Cytosol aminopeptidase family, N-terminal domain
C3496_RS02735	PF06725	3D domain
C3496_RS02745	PF00293	NUDIX domain
C3496_RS02745	PF13344	Haloacid dehalogenase-like hydrolase
C3496_RS02750	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS02755	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS02765	PF06445	GyrI-like small molecule binding domain
C3496_RS02780	PF04463	Protein of unknown function (DUF523)
C3496_RS02790	PF01521	Iron-sulphur cluster biosynthesis
C3496_RS02795	PF01678	Diaminopimelate epimerase
C3496_RS02800	PF07293	Protein of unknown function (DUF1450)
C3496_RS02805	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS02815	PF00005	ABC transporter
C3496_RS02815	PF09383	NIL domain
C3496_RS02820	PF03649	Uncharacterised protein family (UPF0014)
C3496_RS02825	PF08274	PhnA Zinc-Ribbon 
C3496_RS02825	PF03831	PhnA domain
C3496_RS02840	PF01909	Nucleotidyltransferase domain
C3496_RS02840	PF13427	Domain of unknown function (DUF4111)
C3496_RS02845	PF07315	Protein of unknown function (DUF1462)
C3496_RS02850	PF01106	NifU-like domain
C3496_RS02865	PF04608	Phosphatidylglycerophosphatase A
C3496_RS02880	PF02687	FtsX-like permease family
C3496_RS02880	PF00005	ABC transporter
C3496_RS02880	PF12704	MacB-like periplasmic core domain
C3496_RS02885	PF02525	Flavodoxin-like fold
C3496_RS02895	PF13344	Haloacid dehalogenase-like hydrolase
C3496_RS02905	PF01934	Protein of unknown function DUF86
C3496_RS02910	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
C3496_RS02925	PF06265	Protein of unknown function (DUF1027)
C3496_RS02930	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
C3496_RS02935	PF07739	TipAS antibiotic-recognition domain
C3496_RS02935	PF13411	MerR HTH family regulatory protein
C3496_RS02940	PF10086	YhfC intramembrane metalloprotease
C3496_RS02960	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
C3496_RS02960	PF04055	Radical SAM superfamily
C3496_RS02965	PF01551	Peptidase family M23
C3496_RS02975	PF08827	Domain of unknown function (DUF1805)
C3496_RS02980	PF02872	5'-nucleotidase, C-terminal domain
C3496_RS02985	PF01458	Uncharacterized protein family (UPF0051)
C3496_RS02990	PF01592	NifU-like N terminal domain
C3496_RS02995	PF00266	Aminotransferase class-V
C3496_RS03000	PF01458	Uncharacterized protein family (UPF0051)
C3496_RS03005	PF00005	ABC transporter
C3496_RS03010	PF03180	NLPA lipoprotein
C3496_RS03015	PF03180	NLPA lipoprotein
C3496_RS03020	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS03025	PF09383	NIL domain
C3496_RS03025	PF00005	ABC transporter
C3496_RS03035	PF00085	Thioredoxin
C3496_RS03040	PF01751	Toprim domain
C3496_RS03050	PF01597	Glycine cleavage H-protein
C3496_RS03055	PF03960	ArsC family
C3496_RS03105	PF13305	Tetracyclin repressor-like, C-terminal domain
C3496_RS03105	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS03110	PF00753	Metallo-beta-lactamase superfamily
C3496_RS03115	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3496_RS03115	PF02770	Acyl-CoA dehydrogenase, middle domain
C3496_RS03115	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3496_RS03120	PF02803	Thiolase, C-terminal domain
C3496_RS03120	PF00108	Thiolase, N-terminal domain
C3496_RS03125	PF00378	Enoyl-CoA hydratase/isomerase
C3496_RS03125	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3496_RS03125	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3496_RS03130	PF14115	YuzL-like protein
C3496_RS03135	PF00768	D-alanyl-D-alanine carboxypeptidase
C3496_RS03135	PF07943	Penicillin-binding protein 5, C-terminal domain
C3496_RS03140	PF01619	Proline dehydrogenase
C3496_RS03145	PF10835	Protein of unknown function (DUF2573)
C3496_RS03150	PF01910	Thiamine-binding protein
C3496_RS03155	PF02743	Cache domain
C3496_RS03155	PF00672	HAMP domain
C3496_RS03155	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS03175	PF07690	Major Facilitator Superfamily
C3496_RS03180	PF13520	Amino acid permease
C3496_RS03195	PF02096	60Kd inner membrane protein
C3496_RS03205	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3496_RS03205	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS03245	PF09335	SNARE associated Golgi protein
C3496_RS03255	PF03734	L,D-transpeptidase catalytic domain
C3496_RS03255	PF17969	L,D-transpeptidase C-terminal domain
C3496_RS03260	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS03260	PF00072	Response regulator receiver domain
C3496_RS03265	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS03265	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS03265	PF00989	PAS fold
C3496_RS03265	PF16736	Single Cache-like 
C3496_RS03275	PF08264	Anticodon-binding domain of tRNA
C3496_RS03275	PF09334	tRNA synthetases class I (M)
C3496_RS03285	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS03285	PF02743	Cache domain
C3496_RS03285	PF00672	HAMP domain
C3496_RS03290	PF00672	HAMP domain
C3496_RS03290	PF02743	Cache domain
C3496_RS03290	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS03295	PF01883	Iron-sulfur cluster assembly protein
C3496_RS03300	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3496_RS03300	PF01447	Thermolysin metallopeptidase, catalytic domain
C3496_RS03300	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3496_RS03300	PF03413	Peptidase propeptide and YPEB domain
C3496_RS03305	PF02678	Pirin
C3496_RS03305	PF17954	Quercetinase C-terminal cupin domain
C3496_RS03310	PF01047	MarR family
C3496_RS03320	PF09335	SNARE associated Golgi protein
C3496_RS03325	PF00999	Sodium/hydrogen exchanger family
C3496_RS03330	PF02080	TrkA-C domain
C3496_RS03335	PF01235	Sodium:alanine symporter family
C3496_RS03340	PF00210	Ferritin-like domain
C3496_RS03355	PF03641	Possible lysine decarboxylase
C3496_RS03365	PF00210	Ferritin-like domain
C3496_RS03375	PF01773	Na+ dependent nucleoside transporter N-terminus
C3496_RS03375	PF07662	Na+ dependent nucleoside transporter C-terminus
C3496_RS03380	PF07662	Na+ dependent nucleoside transporter C-terminus
C3496_RS03380	PF01773	Na+ dependent nucleoside transporter N-terminus
C3496_RS03385	PF01235	Sodium:alanine symporter family
C3496_RS03390	PF01235	Sodium:alanine symporter family
C3496_RS03395	PF13460	NAD(P)H-binding 
C3496_RS03410	PF00248	Aldo/keto reductase family
C3496_RS03415	PF07690	Major Facilitator Superfamily
C3496_RS03420	PF01638	HxlR-like helix-turn-helix
C3496_RS03425	PF07849	Protein of unknown function (DUF1641)
C3496_RS03430	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS03435	PF01479	S4 domain
C3496_RS03435	PF00579	tRNA synthetases class I (W and Y)
C3496_RS03440	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
C3496_RS03440	PF01565	FAD binding domain 
C3496_RS03450	PF00672	HAMP domain
C3496_RS03450	PF17202	Single cache domain 3
C3496_RS03450	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS03460	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
C3496_RS03465	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
C3496_RS03480	PF13302	Acetyltransferase (GNAT) domain
C3496_RS03485	PF06146	Phosphate-starvation-inducible E
C3496_RS03500	PF00005	ABC transporter
C3496_RS03505	PF01032	FecCD transport family
C3496_RS03510	PF01032	FecCD transport family
C3496_RS03520	PF00072	Response regulator receiver domain
C3496_RS03520	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS03530	PF01668	SmpB protein
C3496_RS03535	PF08206	Ribonuclease B OB domain
C3496_RS03535	PF00773	RNB domain
C3496_RS03535	PF00575	S1 RNA binding domain
C3496_RS03535	PF17876	Cold shock domain
C3496_RS03540	PF12146	Serine aminopeptidase, S33
C3496_RS03545	PF03840	Preprotein translocase SecG subunit
C3496_RS03550	PF04172	LrgB-like family 
C3496_RS03555	PF03788	LrgA family
C3496_RS03560	PF01156	Inosine-uridine preferring nucleoside hydrolase
C3496_RS03565	PF00113	Enolase, C-terminal TIM barrel domain
C3496_RS03565	PF03952	Enolase, N-terminal domain
C3496_RS03570	PF01676	Metalloenzyme superfamily
C3496_RS03570	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
C3496_RS03575	PF00121	Triosephosphate isomerase
C3496_RS03580	PF00162	Phosphoglycerate kinase
C3496_RS03585	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C3496_RS03585	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
C3496_RS03590	PF04198	Putative sugar-binding domain
C3496_RS03600	PF04552	Sigma-54, DNA binding domain
C3496_RS03600	PF04963	Sigma-54 factor, core binding domain
C3496_RS03600	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
C3496_RS03620	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
C3496_RS03625	PF07451	Stage V sporulation protein AD (SpoVAD)
C3496_RS03630	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
C3496_RS03640	PF04239	Protein of unknown function (DUF421)
C3496_RS03645	PF00574	Clp protease
C3496_RS03650	PF00381	PTS HPr component phosphorylation site
C3496_RS03655	PF02650	WhiA C-terminal HTH domain
C3496_RS03655	PF14527	WhiA LAGLIDADG-like domain
C3496_RS03655	PF10298	WhiA N-terminal LAGLIDADG-like domain
C3496_RS03660	PF01933	Uncharacterised protein family UPF0052
C3496_RS03665	PF03668	P-loop ATPase protein family
C3496_RS03670	PF00293	NUDIX domain
C3496_RS03680	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS03690	PF14602	Hexapeptide repeat of succinyl-transferase
C3496_RS03695	PF13419	Haloacid dehalogenase-like hydrolase
C3496_RS03700	PF01790	Prolipoprotein diacylglyceryl transferase
C3496_RS03705	PF02603	HPr Serine kinase N terminus
C3496_RS03705	PF07475	HPr Serine kinase C-terminal domain
C3496_RS03710	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
C3496_RS03720	PF17755	UvrA DNA-binding domain
C3496_RS03720	PF00005	ABC transporter
C3496_RS03720	PF17760	UvrA interaction domain
C3496_RS03725	PF04851	Type III restriction enzyme, res subunit
C3496_RS03725	PF02151	UvrB/uvrC motif
C3496_RS03725	PF12344	Ultra-violet resistance protein B
C3496_RS03725	PF00271	Helicase conserved C-terminal domain
C3496_RS03725	PF17757	UvrB interaction domain
C3496_RS03740	PF13411	MerR HTH family regulatory protein
C3496_RS03740	PF07739	TipAS antibiotic-recognition domain
C3496_RS03765	PF03601	Conserved hypothetical protein 698
C3496_RS03770	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS03770	PF03466	LysR substrate binding domain
C3496_RS03775	PF09278	MerR, DNA binding
C3496_RS03775	PF00376	MerR family regulatory protein
C3496_RS03780	PF03358	NADPH-dependent FMN reductase
C3496_RS03785	PF00005	ABC transporter
C3496_RS03785	PF16326	ABC transporter C-terminal domain
C3496_RS03785	PF12848	ABC transporter
C3496_RS03790	PF01906	Putative heavy-metal-binding
C3496_RS03795	PF00664	ABC transporter transmembrane region
C3496_RS03795	PF00005	ABC transporter
C3496_RS03800	PF17820	PDZ domain
C3496_RS03805	PF17820	PDZ domain
C3496_RS03805	PF03572	Peptidase family S41
C3496_RS03805	PF01471	Putative peptidoglycan binding domain
C3496_RS03810	PF02687	FtsX-like permease family
C3496_RS03810	PF18075	FtsX extracellular domain
C3496_RS03815	PF00005	ABC transporter
C3496_RS03820	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
C3496_RS03830	PF07516	SecA Wing and Scaffold domain
C3496_RS03830	PF02810	SEC-C motif
C3496_RS03830	PF07517	SecA DEAD-like domain
C3496_RS03830	PF01043	SecA preprotein cross-linking domain
C3496_RS03835	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
C3496_RS03835	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
C3496_RS03840	PF00313	'Cold-shock' DNA-binding domain
C3496_RS03850	PF00271	Helicase conserved C-terminal domain
C3496_RS03850	PF04851	Type III restriction enzyme, res subunit
C3496_RS03855	PF01476	LysM domain
C3496_RS03855	PF00877	NlpC/P60 family
C3496_RS03860	PF01638	HxlR-like helix-turn-helix
C3496_RS03865	PF02645	Uncharacterised protein, DegV family COG1307
C3496_RS03870	PF01205	Uncharacterized protein family UPF0029
C3496_RS03870	PF09186	Domain of unknown function (DUF1949)
C3496_RS03875	PF03816	Cell envelope-related transcriptional attenuator domain
C3496_RS03880	PF02350	UDP-N-acetylglucosamine 2-epimerase
C3496_RS03885	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
C3496_RS03885	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
C3496_RS03885	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
C3496_RS03890	PF00953	Glycosyl transferase family 4
C3496_RS03895	PF01522	Polysaccharide deacetylase
C3496_RS03900	PF03610	PTS system fructose IIA component
C3496_RS03900	PF00874	PRD domain
C3496_RS03900	PF00158	Sigma-54 interaction domain
C3496_RS03910	PF02417	Chromate transporter
C3496_RS03915	PF04794	YdjC-like protein
C3496_RS03920	PF11975	Family 4 glycosyl hydrolase C-terminal domain
C3496_RS03920	PF02056	Family 4 glycosyl hydrolase
C3496_RS03925	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
C3496_RS03930	PF02378	Phosphotransferase system, EIIC 
C3496_RS03935	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
C3496_RS03945	PF02675	S-adenosylmethionine decarboxylase 
C3496_RS03950	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
C3496_RS03955	PF02378	Phosphotransferase system, EIIC 
C3496_RS03960	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
C3496_RS03965	PF00375	Sodium:dicarboxylate symporter family
C3496_RS03975	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS03985	PF03466	LysR substrate binding domain
C3496_RS03985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS04000	PF01654	Cytochrome bd terminal oxidase subunit I
C3496_RS04005	PF02322	Cytochrome bd terminal oxidase subunit II
C3496_RS04010	PF02040	Arsenical pump membrane protein
C3496_RS04015	PF01964	Radical SAM ThiC family
C3496_RS04015	PF13667	ThiC-associated domain 
C3496_RS04020	PF02652	L-lactate permease
C3496_RS04030	PF09988	Uncharacterized metal-binding protein (DUF2227)
C3496_RS04040	PF00884	Sulfatase
C3496_RS04045	PF01063	Amino-transferase class IV
C3496_RS04050	PF00877	NlpC/P60 family
C3496_RS04050	PF01476	LysM domain
C3496_RS04055	PF01773	Na+ dependent nucleoside transporter N-terminus
C3496_RS04055	PF07662	Na+ dependent nucleoside transporter C-terminus
C3496_RS04070	PF02028	BCCT, betaine/carnitine/choline family transporter
C3496_RS04075	PF01476	LysM domain
C3496_RS04075	PF06725	3D domain
C3496_RS04085	PF04434	SWIM zinc finger
C3496_RS04090	PF12419	SNF2 Helicase protein 
C3496_RS04090	PF00176	SNF2 family N-terminal domain
C3496_RS04090	PF00271	Helicase conserved C-terminal domain
C3496_RS04120	PF04545	Sigma-70, region 4
C3496_RS04120	PF04542	Sigma-70 region 2 
C3496_RS04125	PF04893	Yip1 domain
C3496_RS04130	PF12704	MacB-like periplasmic core domain
C3496_RS04130	PF02687	FtsX-like permease family
C3496_RS04135	PF00005	ABC transporter
C3496_RS04155	PF07690	Major Facilitator Superfamily
C3496_RS04170	PF16736	Single Cache-like 
C3496_RS04170	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS04170	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS04170	PF00989	PAS fold
C3496_RS04175	PF00072	Response regulator receiver domain
C3496_RS04175	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS04180	PF16363	GDP-mannose 4,6 dehydratase
C3496_RS04185	PF03816	Cell envelope-related transcriptional attenuator domain
C3496_RS04195	PF07977	FabA-like domain
C3496_RS04200	PF02350	UDP-N-acetylglucosamine 2-epimerase
C3496_RS04210	PF08239	Bacterial SH3 domain
C3496_RS04210	PF00005	ABC transporter
C3496_RS04215	PF01061	ABC-2 type transporter
C3496_RS04220	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
C3496_RS04220	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
C3496_RS04220	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
C3496_RS04240	PF00535	Glycosyl transferase family 2
C3496_RS04265	PF12116	Stage III sporulation protein D
C3496_RS04280	PF01551	Peptidase family M23
C3496_RS04290	PF00005	ABC transporter
C3496_RS04295	PF00072	Response regulator receiver domain
C3496_RS04295	PF04397	LytTr DNA-binding domain
C3496_RS04300	PF08486	Stage II sporulation protein
C3496_RS04305	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
C3496_RS04315	PF06612	Protein of unknown function (DUF1146)
C3496_RS04320	PF00361	Proton-conducting membrane transporter
C3496_RS04325	PF00361	Proton-conducting membrane transporter
C3496_RS04330	PF01010	NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
C3496_RS04330	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
C3496_RS04330	PF00361	Proton-conducting membrane transporter
C3496_RS04335	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
C3496_RS04340	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
C3496_RS04350	PF00146	NADH dehydrogenase
C3496_RS04355	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
C3496_RS04360	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
C3496_RS04365	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
C3496_RS04370	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
C3496_RS04375	PF03707	Bacterial signalling protein N terminal repeat
C3496_RS04375	PF00563	EAL domain
C3496_RS04375	PF00990	Diguanylate cyclase, GGDEF domain
C3496_RS04390	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
C3496_RS04390	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
C3496_RS04395	PF02874	ATP synthase alpha/beta family, beta-barrel domain
C3496_RS04395	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3496_RS04400	PF00231	ATP synthase
C3496_RS04405	PF00306	ATP synthase alpha/beta chain, C terminal domain
C3496_RS04405	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3496_RS04405	PF02874	ATP synthase alpha/beta family, beta-barrel domain
C3496_RS04410	PF00213	ATP synthase delta (OSCP) subunit
C3496_RS04415	PF00430	ATP synthase B/B' CF(0)
C3496_RS04420	PF00137	ATP synthase subunit C
C3496_RS04425	PF00119	ATP synthase A chain
C3496_RS04430	PF03899	ATP synthase I chain
C3496_RS04450	PF00464	Serine hydroxymethyltransferase
C3496_RS04455	PF04260	Protein of unknown function (DUF436) 
C3496_RS04460	PF02502	Ribose/Galactose Isomerase
C3496_RS04465	PF01451	Low molecular weight phosphotyrosine protein phosphatase
C3496_RS04470	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
C3496_RS04475	PF07681	DoxX
C3496_RS04480	PF01613	Flavin reductase like domain
C3496_RS04495	PF02659	Putative manganese efflux pump
C3496_RS04500	PF01300	Telomere recombination
C3496_RS04500	PF03481	Putative GTP-binding controlling metal-binding
C3496_RS04510	PF09551	Stage II sporulation protein R (spore_II_R)
C3496_RS04515	PF13847	Methyltransferase domain
C3496_RS04515	PF17827	PrmC N-terminal domain
C3496_RS04520	PF03462	PCRF domain
C3496_RS04520	PF00472	RF-1 domain
C3496_RS04525	PF00265	Thymidine kinase
C3496_RS04530	PF01197	Ribosomal protein L31
C3496_RS04535	PF07497	Rho termination factor, RNA-binding domain
C3496_RS04535	PF07498	Rho termination factor, N-terminal domain
C3496_RS04535	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3496_RS04540	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
C3496_RS04545	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
C3496_RS04550	PF01116	Fructose-bisphosphate aldolase class-II
C3496_RS04555	PF00072	Response regulator receiver domain
C3496_RS04560	PF10740	Domain of unknown function (DUF2529)
C3496_RS04565	PF06418	CTP synthase N-terminus
C3496_RS04565	PF00117	Glutamine amidotransferase class-I
C3496_RS04570	PF05066	HB1, ASXL, restriction endonuclease HTH domain
C3496_RS04580	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3496_RS04580	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3496_RS04580	PF02770	Acyl-CoA dehydrogenase, middle domain
C3496_RS04585	PF02770	Acyl-CoA dehydrogenase, middle domain
C3496_RS04585	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3496_RS04585	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3496_RS04590	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3496_RS04590	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3496_RS04595	PF00108	Thiolase, N-terminal domain
C3496_RS04595	PF02803	Thiolase, C-terminal domain
C3496_RS04600	PF02754	Cysteine-rich domain
C3496_RS04600	PF13183	4Fe-4S dicluster domain
C3496_RS04605	PF13091	PLD-like domain
C3496_RS04610	PF03851	UV-endonuclease UvdE
C3496_RS04615	PF00563	EAL domain
C3496_RS04615	PF00990	Diguanylate cyclase, GGDEF domain
C3496_RS04615	PF03707	Bacterial signalling protein N terminal repeat
C3496_RS04635	PF00196	Bacterial regulatory proteins, luxR family
C3496_RS04635	PF00072	Response regulator receiver domain
C3496_RS04640	PF07730	Histidine kinase
C3496_RS04640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS04650	PF00005	ABC transporter
C3496_RS04655	PF00557	Metallopeptidase family M24
C3496_RS04665	PF02225	PA domain
C3496_RS04665	PF04389	Peptidase family M28
C3496_RS04685	PF08281	Sigma-70, region 4
C3496_RS04685	PF04542	Sigma-70 region 2 
C3496_RS04690	PF05746	DALR anticodon binding domain
C3496_RS04690	PF03485	Arginyl tRNA synthetase N terminal domain
C3496_RS04690	PF00750	tRNA synthetases class I (R)
C3496_RS04695	PF09148	Domain of unknown function (DUF1934)
C3496_RS04700	PF17676	LD-carboxypeptidase C-terminal domain
C3496_RS04700	PF02016	LD-carboxypeptidase N-terminal domain
C3496_RS04715	PF00491	Arginase family
C3496_RS04720	PF17284	Spermidine synthase tetramerisation domain
C3496_RS04725	PF07690	Major Facilitator Superfamily
C3496_RS04730	PF13411	MerR HTH family regulatory protein
C3496_RS04735	PF03009	Glycerophosphoryl diester phosphodiesterase family
C3496_RS04740	PF00912	Transglycosylase
C3496_RS04740	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS04745	PF08741	YwhD family
C3496_RS04750	PF02163	Peptidase family M50
C3496_RS04755	PF01361	Tautomerase enzyme
C3496_RS04760	PF01966	HD domain
C3496_RS04765	PF01497	Periplasmic binding protein
C3496_RS04770	PF00005	ABC transporter
C3496_RS04775	PF01032	FecCD transport family
C3496_RS04780	PF01032	FecCD transport family
C3496_RS04785	PF07293	Protein of unknown function (DUF1450)
C3496_RS04800	PF03099	Biotin/lipoate A/B protein ligase family
C3496_RS04805	PF01515	Phosphate acetyl/butaryl transferase
C3496_RS04810	PF06778	Chlorite dismutase
C3496_RS04815	PF00768	D-alanyl-D-alanine carboxypeptidase
C3496_RS04815	PF07943	Penicillin-binding protein 5, C-terminal domain
C3496_RS04820	PF07486	Cell Wall Hydrolase
C3496_RS04825	PF09671	Spore coat protein (Spore_GerQ)
C3496_RS04830	PF04241	Protein of unknown function (DUF423)
C3496_RS04840	PF02254	TrkA-N domain
C3496_RS04840	PF07885	Ion channel
C3496_RS04845	PF00860	Permease family
C3496_RS04855	PF12823	Domain of unknown function (DUF3817)
C3496_RS04860	PF03167	Uracil DNA glycosylase superfamily
C3496_RS04865	PF12679	ABC-2 family transporter protein
C3496_RS04870	PF00005	ABC transporter
C3496_RS04875	PF13472	GDSL-like Lipase/Acylhydrolase family
C3496_RS04880	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
C3496_RS04880	PF00356	Bacterial regulatory proteins, lacI family
C3496_RS04890	PF01842	ACT domain
C3496_RS04890	PF03447	Homoserine dehydrogenase, NAD binding domain
C3496_RS04890	PF00742	Homoserine dehydrogenase
C3496_RS04895	PF04204	Homoserine O-succinyltransferase 
C3496_RS04900	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3496_RS04910	PF13419	Haloacid dehalogenase-like hydrolase
C3496_RS04915	PF00027	Cyclic nucleotide-binding domain
C3496_RS04920	PF02525	Flavodoxin-like fold
C3496_RS04925	PF00196	Bacterial regulatory proteins, luxR family
C3496_RS04925	PF00072	Response regulator receiver domain
C3496_RS04930	PF13185	GAF domain
C3496_RS04930	PF07730	Histidine kinase
C3496_RS04935	PF08543	Phosphomethylpyrimidine kinase
C3496_RS04940	PF00990	Diguanylate cyclase, GGDEF domain
C3496_RS04940	PF07694	5TMR of 5TMR-LYT
C3496_RS04945	PF04328	Selenoprotein, putative 
C3496_RS04950	PF13722	5TM C-terminal transporter carbon starvation CstA
C3496_RS04950	PF02554	Carbon starvation protein CstA
C3496_RS04955	PF00072	Response regulator receiver domain
C3496_RS04955	PF04397	LytTr DNA-binding domain
C3496_RS04960	PF07690	Major Facilitator Superfamily
C3496_RS04965	PF03808	Glycosyl transferase WecB/TagA/CpsF family
C3496_RS04980	PF03458	UPF0126 domain
C3496_RS04985	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS04995	PF03061	Thioesterase superfamily
C3496_RS05005	PF00535	Glycosyl transferase family 2
C3496_RS05010	PF00005	ABC transporter
C3496_RS05010	PF12848	ABC transporter
C3496_RS05020	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS05025	PF00873	AcrB/AcrD/AcrF family
C3496_RS05030	PF01641	SelR domain
C3496_RS05030	PF01625	Peptide methionine sulfoxide reductase
C3496_RS05035	PF01594	AI-2E family transporter
C3496_RS05040	PF04172	LrgB-like family 
C3496_RS05045	PF03788	LrgA family
C3496_RS05050	PF00072	Response regulator receiver domain
C3496_RS05050	PF04397	LytTr DNA-binding domain
C3496_RS05055	PF07694	5TMR of 5TMR-LYT
C3496_RS05055	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS05055	PF06580	Histidine kinase
C3496_RS05055	PF13492	GAF domain
C3496_RS05060	PF07690	Major Facilitator Superfamily
C3496_RS05065	PF02028	BCCT, betaine/carnitine/choline family transporter
C3496_RS05070	PF02898	Nitric oxide synthase, oxygenase domain
C3496_RS05075	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
C3496_RS05075	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
C3496_RS05085	PF02293	AmiS/UreI family transporter
C3496_RS05095	PF16363	GDP-mannose 4,6 dehydratase
C3496_RS05100	PF03006	Haemolysin-III related
C3496_RS05110	PF00271	Helicase conserved C-terminal domain
C3496_RS05110	PF00270	DEAD/DEAH box helicase
C3496_RS05110	PF03880	DbpA RNA binding domain   
C3496_RS05115	PF00478	IMP dehydrogenase / GMP reductase domain
C3496_RS05120	PF08439	Oligopeptidase F
C3496_RS05120	PF01432	Peptidase family M3
C3496_RS05130	PF02590	Predicted SPOUT methyltransferase
C3496_RS05140	PF13180	PDZ domain
C3496_RS05145	PF00753	Metallo-beta-lactamase superfamily
C3496_RS05150	PF09648	YycH protein
C3496_RS05155	PF07435	YycH protein
C3496_RS05160	PF13426	PAS domain
C3496_RS05160	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS05160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS05160	PF00672	HAMP domain
C3496_RS05165	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS05165	PF00072	Response regulator receiver domain
C3496_RS05190	PF00709	Adenylosuccinate synthetase
C3496_RS05195	PF03796	DnaB-like helicase C terminal domain
C3496_RS05195	PF00772	DnaB-like helicase N terminal domain
C3496_RS05200	PF03948	Ribosomal protein L9, C-terminal domain
C3496_RS05200	PF01281	Ribosomal protein L9, N-terminal domain
C3496_RS05205	PF01368	DHH family
C3496_RS05205	PF02272	DHHA1 domain
C3496_RS05210	PF09991	Predicted membrane protein (DUF2232)
C3496_RS05215	PF01084	Ribosomal protein S18
C3496_RS05220	PF00436	Single-strand binding protein family
C3496_RS05225	PF01250	Ribosomal protein S6
C3496_RS05230	PF01926	50S ribosome-binding GTPase
C3496_RS05230	PF06071	Protein of unknown function (DUF933)
C3496_RS05235	PF06107	Bacterial protein of unknown function (DUF951)
C3496_RS05240	PF00924	Mechanosensitive ion channel
C3496_RS05245	PF06866	Protein of unknown function (DUF1256)
C3496_RS05250	PF02195	ParB-like nuclease domain
C3496_RS05250	PF17762	HTH domain found in ParB protein
C3496_RS05255	PF13614	AAA domain
C3496_RS05260	PF02195	ParB-like nuclease domain
C3496_RS05260	PF17762	HTH domain found in ParB protein
C3496_RS05265	PF02527	rRNA small subunit methyltransferase G
C3496_RS05270	PF01134	Glucose inhibited division protein A
C3496_RS05270	PF13932	GidA associated domain
C3496_RS05275	PF10396	GTP-binding protein TrmE N-terminus
C3496_RS05275	PF12631	MnmE helical domain
C3496_RS05275	PF01926	50S ribosome-binding GTPase
C3496_RS05280	PF01424	R3H domain
C3496_RS05280	PF14804	Jag N-terminus
C3496_RS05285	PF02096	60Kd inner membrane protein
C3496_RS05290	PF00825	Ribonuclease P
C3496_RS05295	PF00468	Ribosomal protein L34
C3496_RS05300	PF11638	DnaA N-terminal domain
C3496_RS05300	PF08299	Bacterial dnaA protein helix-turn-helix
C3496_RS05300	PF00308	Bacterial dnaA  protein
C3496_RS05305	PF02767	DNA polymerase III beta subunit, central domain
C3496_RS05305	PF02768	DNA polymerase III beta subunit, C-terminal domain
C3496_RS05305	PF00712	DNA polymerase III beta subunit, N-terminal domain
C3496_RS05315	PF02463	RecF/RecN/SMC N terminal domain
C3496_RS05320	PF01751	Toprim domain
C3496_RS05320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS05320	PF00986	DNA gyrase B subunit, carboxyl terminus
C3496_RS05320	PF00204	DNA gyrase B
C3496_RS05325	PF00521	DNA gyrase/topoisomerase IV, subunit A
C3496_RS05325	PF03989	DNA gyrase C-terminal domain, beta-propeller
C3496_RS05355	PF14175	YaaC-like Protein
C3496_RS05360	PF00478	IMP dehydrogenase / GMP reductase domain
C3496_RS05360	PF00571	CBS domain
C3496_RS05365	PF00768	D-alanyl-D-alanine carboxypeptidase
C3496_RS05365	PF07943	Penicillin-binding protein 5, C-terminal domain
C3496_RS05370	PF01680	SOR/SNZ family
C3496_RS05375	PF01174	SNO glutamine amidotransferase family
C3496_RS05380	PF02403	Seryl-tRNA synthetase N-terminal domain
C3496_RS05380	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3496_RS05395	PF01712	Deoxynucleoside kinase
C3496_RS05400	PF01712	Deoxynucleoside kinase
C3496_RS05405	PF00857	Isochorismatase family
C3496_RS05410	PF14437	MafB19-like deaminase
C3496_RS05420	PF12169	DNA polymerase III subunits gamma and tau domain III
C3496_RS05425	PF02575	YbaB/EbfC DNA-binding family
C3496_RS05430	PF13662	Toprim domain
C3496_RS05430	PF02132	RecR protein
C3496_RS05435	PF10704	Protein of unknown function (DUF2508)
C3496_RS05440	PF07441	SigmaK-factor processing regulatory protein BofA
C3496_RS05475	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
C3496_RS05475	PF01276	Orn/Lys/Arg decarboxylase, major domain
C3496_RS05480	PF02223	Thymidylate kinase
C3496_RS05485	PF09115	DNA polymerase III, delta subunit, C terminal
C3496_RS05490	PF04468	PSP1 C-terminal conserved region
C3496_RS05495	PF06156	Initiation control protein YabA
C3496_RS05500	PF05175	Methyltransferase small domain
C3496_RS05505	PF01541	GIY-YIG catalytic domain
C3496_RS05515	PF18277	AbrB C-terminal domain
C3496_RS05515	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
C3496_RS05520	PF08264	Anticodon-binding domain of tRNA
C3496_RS05520	PF09334	tRNA synthetases class I (M)
C3496_RS05520	PF01588	Putative tRNA binding domain
C3496_RS05525	PF01026	TatD related DNase
C3496_RS05530	PF13662	Toprim domain
C3496_RS05530	PF13331	Domain of unknown function (DUF4093)
C3496_RS05535	PF00398	Ribosomal RNA adenine dimethylase
C3496_RS05540	PF05582	YabG peptidase U57
C3496_RS05545	PF06257	Biofilm formation stimulator VEG
C3496_RS05550	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3496_RS05555	PF08544	GHMP kinases C terminal 
C3496_RS05555	PF00288	GHMP kinases N terminal domain
C3496_RS05560	PF09182	Bacterial purine repressor, N-terminal
C3496_RS05560	PF00156	Phosphoribosyl transferase domain
C3496_RS05565	PF01042	Endoribonuclease L-PSP
C3496_RS05570	PF04026	SpoVG
C3496_RS05575	PF00483	Nucleotidyl transferase
C3496_RS05575	PF00132	Bacterial transferase hexapeptide (six repeats)
C3496_RS05580	PF14572	Phosphoribosyl synthetase-associated domain
C3496_RS05580	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
C3496_RS05585	PF01195	Peptidyl-tRNA hydrolase
C3496_RS05595	PF17757	UvrB interaction domain
C3496_RS05595	PF03461	TRCF domain
C3496_RS05595	PF00270	DEAD/DEAH box helicase
C3496_RS05595	PF02559	CarD-like/TRCF domain
C3496_RS05595	PF00271	Helicase conserved C-terminal domain
C3496_RS05600	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
C3496_RS05600	PF15714	Stage V sporulation protein T C-terminal, transcription factor
C3496_RS05605	PF01943	Polysaccharide biosynthesis protein
C3496_RS05605	PF14667	Polysaccharide biosynthesis C-terminal domain
C3496_RS05610	PF03819	MazG nucleotide pyrophosphohydrolase domain
C3496_RS05610	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
C3496_RS05615	PF01479	S4 domain
C3496_RS05620	PF07873	YabP family
C3496_RS05625	PF09578	Spore cortex protein YabQ (Spore_YabQ)
C3496_RS05635	PF00575	S1 RNA binding domain
C3496_RS05650	PF07228	Stage II sporulation protein E (SpoIIE)
C3496_RS05655	PF01171	PP-loop family
C3496_RS05655	PF09179	TilS substrate binding domain
C3496_RS05655	PF11734	TilS substrate C-terminal domain
C3496_RS05660	PF00156	Phosphoribosyl transferase domain
C3496_RS05665	PF01434	Peptidase family M41
C3496_RS05665	PF06480	FtsH Extracellular
C3496_RS05665	PF17862	AAA+ lid domain
C3496_RS05665	PF00004	ATPase family associated with various cellular activities (AAA)
C3496_RS05670	PF03309	Type III pantothenate kinase
C3496_RS05675	PF01430	Hsp33 protein
C3496_RS05680	PF00291	Pyridoxal-phosphate dependent enzyme
C3496_RS05685	PF00425	chorismate binding enzyme
C3496_RS05685	PF04715	Anthranilate synthase component I, N terminal region
C3496_RS05690	PF00117	Glutamine amidotransferase class-I
C3496_RS05695	PF01063	Amino-transferase class IV
C3496_RS05700	PF00809	Pterin binding enzyme
C3496_RS05705	PF02152	Dihydroneopterin aldolase
C3496_RS05710	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
C3496_RS05715	PF01381	Helix-turn-helix
C3496_RS05720	PF01207	Dihydrouridine synthase (Dus)
C3496_RS05725	PF01336	OB-fold nucleic acid binding domain
C3496_RS05725	PF00152	tRNA synthetases class II (D, K and N) 
C3496_RS05805	PF05848	CtsR N-terminal HTH domain
C3496_RS05805	PF17727	CtsR C-terminal dimerization domain
C3496_RS05810	PF02151	UvrB/uvrC motif
C3496_RS05815	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
C3496_RS05820	PF00004	ATPase family associated with various cellular activities (AAA)
C3496_RS05820	PF07724	AAA domain (Cdc48 subfamily)
C3496_RS05820	PF17871	AAA lid domain
C3496_RS05820	PF02861	Clp amino terminal domain, pathogenicity island component
C3496_RS05820	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3496_RS05825	PF18073	Rubredoxin metal binding domain
C3496_RS05830	PF02457	DisA bacterial checkpoint controller nucleotide-binding
C3496_RS05830	PF10635	DisA bacterial checkpoint controller linker region 
C3496_RS05840	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
C3496_RS05845	PF02542	YgbB family
C3496_RS05850	PF00749	tRNA synthetases class I (E and Q), catalytic domain
C3496_RS05855	PF06426	Serine acetyltransferase, N-terminal 
C3496_RS05855	PF00132	Bacterial transferase hexapeptide (six repeats)
C3496_RS05860	PF09190	DALR domain
C3496_RS05860	PF01406	tRNA synthetases class I (C) catalytic domain
C3496_RS05865	PF00636	Ribonuclease III domain
C3496_RS05870	PF00588	SpoU rRNA Methylase family
C3496_RS05870	PF08032	RNA 2'-O ribose methyltransferase substrate binding
C3496_RS05875	PF05991	YacP-like NYN domain
C3496_RS05880	PF08281	Sigma-70, region 4
C3496_RS05880	PF04542	Sigma-70 region 2 
C3496_RS05885	PF00471	Ribosomal protein L33
C3496_RS05890	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
C3496_RS05895	PF00467	KOW motif
C3496_RS05895	PF02357	Transcription termination factor nusG
C3496_RS05900	PF00298	Ribosomal protein L11, RNA binding domain
C3496_RS05900	PF03946	Ribosomal protein L11, N-terminal domain
C3496_RS05905	PF00687	Ribosomal protein L1p/L10e family
C3496_RS05910	PF00466	Ribosomal protein L10
C3496_RS05915	PF16320	Ribosomal protein L7/L12 dimerisation domain
C3496_RS05915	PF00542	Ribosomal protein L7/L12 C-terminal domain
C3496_RS05920	PF05175	Methyltransferase small domain
C3496_RS05925	PF04561	RNA polymerase Rpb2, domain 2
C3496_RS05925	PF04565	RNA polymerase Rpb2, domain 3
C3496_RS05925	PF10385	RNA polymerase beta subunit external 1 domain
C3496_RS05925	PF00562	RNA polymerase Rpb2, domain 6
C3496_RS05925	PF04563	RNA polymerase beta subunit
C3496_RS05925	PF04560	RNA polymerase Rpb2, domain 7
C3496_RS05930	PF04983	RNA polymerase Rpb1, domain 3
C3496_RS05930	PF04998	RNA polymerase Rpb1, domain 5
C3496_RS05930	PF05000	RNA polymerase Rpb1, domain 4
C3496_RS05930	PF04997	RNA polymerase Rpb1, domain 1
C3496_RS05930	PF00623	RNA polymerase Rpb1, domain 2
C3496_RS05935	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
C3496_RS05940	PF00164	Ribosomal protein S12/S23
C3496_RS05945	PF00177	Ribosomal protein S7p/S5e
C3496_RS05950	PF03764	Elongation factor G, domain IV
C3496_RS05950	PF00009	Elongation factor Tu GTP binding domain
C3496_RS05950	PF14492	Elongation Factor G, domain II
C3496_RS05950	PF03144	Elongation factor Tu domain 2
C3496_RS05950	PF00679	Elongation factor G C-terminus
C3496_RS05955	PF00009	Elongation factor Tu GTP binding domain
C3496_RS05955	PF03143	Elongation factor Tu C-terminal domain
C3496_RS05955	PF03144	Elongation factor Tu domain 2
C3496_RS05960	PF00338	Ribosomal protein S10p/S20e
C3496_RS05965	PF00297	Ribosomal protein L3
C3496_RS05970	PF00573	Ribosomal protein L4/L1 family
C3496_RS05975	PF00276	Ribosomal protein L23
C3496_RS05980	PF00181	Ribosomal Proteins L2, RNA binding domain
C3496_RS05980	PF03947	Ribosomal Proteins L2, C-terminal domain
C3496_RS05985	PF00203	Ribosomal protein S19
C3496_RS05990	PF00237	Ribosomal protein L22p/L17e
C3496_RS05995	PF07650	KH domain
C3496_RS05995	PF00189	Ribosomal protein S3, C-terminal domain
C3496_RS06000	PF00252	Ribosomal protein L16p/L10e
C3496_RS06005	PF00831	Ribosomal L29 protein
C3496_RS06010	PF00366	Ribosomal protein S17
C3496_RS06015	PF00238	Ribosomal protein L14p/L23e
C3496_RS06020	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
C3496_RS06020	PF00467	KOW motif
C3496_RS06025	PF00281	Ribosomal protein L5
C3496_RS06025	PF00673	ribosomal L5P family C-terminus
C3496_RS06030	PF00253	Ribosomal protein S14p/S29e
C3496_RS06035	PF00410	Ribosomal protein S8
C3496_RS06040	PF00347	Ribosomal protein L6
C3496_RS06045	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
C3496_RS06050	PF03719	Ribosomal protein S5, C-terminal domain
C3496_RS06050	PF00333	Ribosomal protein S5, N-terminal domain
C3496_RS06055	PF00327	Ribosomal protein L30p/L7e
C3496_RS06060	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
C3496_RS06065	PF00344	SecY translocase
C3496_RS06070	PF05191	Adenylate kinase, active site lid
C3496_RS06075	PF00557	Metallopeptidase family M24
C3496_RS06080	PF01176	Translation initiation factor 1A / IF-1
C3496_RS06085	PF00444	Ribosomal protein L36
C3496_RS06090	PF00416	Ribosomal protein S13/S18
C3496_RS06095	PF00411	Ribosomal protein S11
C3496_RS06100	PF01000	RNA polymerase Rpb3/RpoA insert domain
C3496_RS06100	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
C3496_RS06100	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
C3496_RS06105	PF01196	Ribosomal protein L17
C3496_RS06110	PF00005	ABC transporter
C3496_RS06115	PF00005	ABC transporter
C3496_RS06120	PF02361	Cobalt transport protein
C3496_RS06125	PF01416	tRNA pseudouridine synthase
C3496_RS06130	PF00572	Ribosomal protein L13
C3496_RS06135	PF00380	Ribosomal protein S9/S16
C3496_RS06145	PF01520	N-acetylmuramoyl-L-alanine amidase
C3496_RS06150	PF10609	NUBPL iron-transfer P-loop NTPase
C3496_RS06155	PF17898	Spore germination GerD central core domain
C3496_RS06160	PF14089	KinB-signalling pathway activation in sporulation
C3496_RS06165	PF01522	Polysaccharide deacetylase
C3496_RS06235	PF02595	Glycerate kinase family
C3496_RS06240	PF00491	Arginase family
C3496_RS06245	PF02457	DisA bacterial checkpoint controller nucleotide-binding
C3496_RS06250	PF07949	YbbR-like protein
C3496_RS06255	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
C3496_RS06255	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
C3496_RS06255	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
C3496_RS06255	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
C3496_RS06265	PF01380	SIS domain
C3496_RS06275	PF08722	TnsA endonuclease N terminal
C3496_RS06275	PF08721	TnsA endonuclease C terminal
C3496_RS06280	PF00665	Integrase core domain
C3496_RS06285	PF13401	AAA domain
C3496_RS06285	PF11426	Tn7 transposition regulator TnsC
C3496_RS06300	PF02086	D12 class N6 adenine-specific DNA methyltransferase
C3496_RS06345	PF00561	alpha/beta hydrolase fold
C3496_RS06350	PF07729	FCD domain
C3496_RS06350	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS06355	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
C3496_RS06355	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
C3496_RS06360	PF02447	GntP family permease
C3496_RS06365	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
C3496_RS06365	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3496_RS06370	PF07676	WD40-like Beta Propeller Repeat
C3496_RS06370	PF00326	Prolyl oligopeptidase family
C3496_RS06405	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS06410	PF09383	NIL domain
C3496_RS06410	PF00005	ABC transporter
C3496_RS06415	PF03180	NLPA lipoprotein
C3496_RS06420	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS06420	PF00107	Zinc-binding dehydrogenase
C3496_RS06430	PF01565	FAD binding domain 
C3496_RS06435	PF07690	Major Facilitator Superfamily
C3496_RS06445	PF07690	Major Facilitator Superfamily
C3496_RS06460	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS06465	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS06465	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3496_RS06470	PF00005	ABC transporter
C3496_RS06470	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3496_RS06475	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3496_RS06475	PF00005	ABC transporter
C3496_RS06480	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS06490	PF12833	Helix-turn-helix domain
C3496_RS06500	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS06510	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS06515	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS06520	PF00248	Aldo/keto reductase family
C3496_RS06525	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3496_RS06525	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3496_RS06530	PF04973	Nicotinamide mononucleotide transporter
C3496_RS06535	PF06800	Sugar transport protein
C3496_RS06540	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS06550	PF12728	Helix-turn-helix domain
C3496_RS06550	PF12727	PBP superfamily domain
C3496_RS06560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS06560	PF03466	LysR substrate binding domain
C3496_RS06565	PF00892	EamA-like transporter family
C3496_RS06570	PF14142	YrzO-like protein
C3496_RS06580	PF01553	Acyltransferase
C3496_RS06590	PF00356	Bacterial regulatory proteins, lacI family
C3496_RS06590	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
C3496_RS06600	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3496_RS06600	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS06620	PF10096	Uncharacterized protein conserved in bacteria (DUF2334)
C3496_RS06645	PF12848	ABC transporter
C3496_RS06645	PF16326	ABC transporter C-terminal domain
C3496_RS06645	PF00005	ABC transporter
C3496_RS06650	PF07730	Histidine kinase
C3496_RS06655	PF00196	Bacterial regulatory proteins, luxR family
C3496_RS06655	PF00072	Response regulator receiver domain
C3496_RS06660	PF00005	ABC transporter
C3496_RS06680	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS06685	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS06690	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS06690	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3496_RS06695	PF00005	ABC transporter
C3496_RS06695	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3496_RS06700	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3496_RS06700	PF00005	ABC transporter
C3496_RS06735	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS06740	PF01557	Fumarylacetoacetate (FAA) hydrolase family
C3496_RS06750	PF13520	Amino acid permease
C3496_RS06760	PF01820	D-ala D-ala ligase N-terminus
C3496_RS06760	PF07478	D-ala D-ala ligase C-terminus
C3496_RS06765	PF01225	Mur ligase family, catalytic domain
C3496_RS06765	PF08245	Mur ligase middle domain
C3496_RS06765	PF02875	Mur ligase family, glutamate ligase domain
C3496_RS06770	PF00271	Helicase conserved C-terminal domain
C3496_RS06770	PF00270	DEAD/DEAH box helicase
C3496_RS06775	PF03851	UV-endonuclease UvdE
C3496_RS06780	PF01694	Rhomboid family
C3496_RS06785	PF01648	4'-phosphopantetheinyl transferase superfamily
C3496_RS06795	PF01168	Alanine racemase, N-terminal domain
C3496_RS06795	PF00842	Alanine racemase, C-terminal domain
C3496_RS06800	PF01402	Ribbon-helix-helix protein, copG family
C3496_RS06805	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
C3496_RS06810	PF00575	S1 RNA binding domain
C3496_RS06810	PF17674	HHH domain
C3496_RS06810	PF09371	Tex-like protein N-terminal domain
C3496_RS06810	PF16921	Tex protein YqgF-like domain
C3496_RS06820	PF10263	SprT-like family
C3496_RS06820	PF17283	SprT-like zinc ribbon domain
C3496_RS06905	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
C3496_RS06910	PF00814	Glycoprotease family
C3496_RS06915	PF00583	Acetyltransferase (GNAT) family
C3496_RS06920	PF00814	Glycoprotease family
C3496_RS06925	PF12848	ABC transporter
C3496_RS06925	PF16326	ABC transporter C-terminal domain
C3496_RS06925	PF00005	ABC transporter
C3496_RS06930	PF06971	Putative DNA-binding protein N-terminus
C3496_RS06930	PF02629	CoA binding domain
C3496_RS06940	PF02517	CPBP intramembrane metalloprotease
C3496_RS06945	PF00166	Chaperonin 10 Kd subunit
C3496_RS06950	PF00118	TCP-1/cpn60 chaperonin family
C3496_RS06955	PF02540	NAD synthase
C3496_RS06955	PF00958	GMP synthase C terminal domain
C3496_RS06955	PF00117	Glutamine amidotransferase class-I
C3496_RS06960	PF00860	Permease family
C3496_RS06965	PF00072	Response regulator receiver domain
C3496_RS06965	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS06970	PF16736	Single Cache-like 
C3496_RS06970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS06970	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS06970	PF00989	PAS fold
C3496_RS06995	PF01323	DSBA-like thioredoxin domain
C3496_RS07055	PF02673	Bacitracin resistance protein BacA
C3496_RS07065	PF00005	ABC transporter
C3496_RS07070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS07070	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS07075	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS07075	PF00072	Response regulator receiver domain
C3496_RS07095	PF00892	EamA-like transporter family
C3496_RS07120	PF00731	AIR carboxylase
C3496_RS07125	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
C3496_RS07125	PF02222	ATP-grasp domain
C3496_RS07130	PF10397	Adenylosuccinate lyase C-terminus
C3496_RS07130	PF00206	Lyase
C3496_RS07135	PF01259	SAICAR synthetase
C3496_RS07140	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
C3496_RS07150	PF02769	AIR synthase related protein, C-terminal domain
C3496_RS07150	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
C3496_RS07150	PF00586	AIR synthase related protein, N-terminal domain
C3496_RS07155	PF00156	Phosphoribosyl transferase domain
C3496_RS07160	PF02769	AIR synthase related protein, C-terminal domain
C3496_RS07160	PF00586	AIR synthase related protein, N-terminal domain
C3496_RS07165	PF00551	Formyl transferase
C3496_RS07170	PF02142	MGS-like domain
C3496_RS07170	PF01808	AICARFT/IMPCHase bienzyme
C3496_RS07175	PF02843	Phosphoribosylglycinamide synthetase, C domain
C3496_RS07175	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
C3496_RS07175	PF02844	Phosphoribosylglycinamide synthetase, N domain
C3496_RS07195	PF01884	PcrB family
C3496_RS07200	PF13361	UvrD-like helicase C-terminal domain
C3496_RS07200	PF00580	UvrD/REP helicase N-terminal domain
C3496_RS07205	PF12826	Helix-hairpin-helix motif
C3496_RS07205	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
C3496_RS07205	PF01653	NAD-dependent DNA ligase adenylation domain
C3496_RS07205	PF00533	BRCA1 C Terminus (BRCT) domain
C3496_RS07205	PF03120	NAD-dependent DNA ligase OB-fold domain
C3496_RS07210	PF07537	CamS sex pheromone cAM373 precursor
C3496_RS07215	PF01925	Sulfite exporter TauE/SafE
C3496_RS07220	PF00171	Aldehyde dehydrogenase family
C3496_RS07225	PF00857	Isochorismatase family
C3496_RS07230	PF00005	ABC transporter
C3496_RS07230	PF09383	NIL domain
C3496_RS07235	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS07240	PF03180	NLPA lipoprotein
C3496_RS07255	PF02374	Anion-transporting ATPase
C3496_RS07255	PF17886	HSP20-like domain found in ArsA
C3496_RS07260	PF01047	MarR family
C3496_RS07265	PF05360	yiaA/B two helix domain
C3496_RS07270	PF02686	Glu-tRNAGln amidotransferase C subunit
C3496_RS07275	PF01425	Amidase
C3496_RS07280	PF02637	GatB domain
C3496_RS07280	PF02934	GatB/GatE catalytic domain
C3496_RS07285	PF00781	Diacylglycerol kinase catalytic domain
C3496_RS07290	PF13419	Haloacid dehalogenase-like hydrolase
C3496_RS07295	PF00202	Aminotransferase class-III
C3496_RS07300	PF00158	Sigma-54 interaction domain
C3496_RS07305	PF00171	Aldehyde dehydrogenase family
C3496_RS07310	PF00893	Small Multidrug Resistance protein
C3496_RS07315	PF02073	Thermophilic metalloprotease (M29)
C3496_RS07330	PF07662	Na+ dependent nucleoside transporter C-terminus
C3496_RS07330	PF01773	Na+ dependent nucleoside transporter N-terminus
C3496_RS07330	PF07670	Nucleoside recognition
C3496_RS07335	PF05958	tRNA (Uracil-5-)-methyltransferase
C3496_RS07335	PF01938	TRAM domain
C3496_RS07335	PF02475	Met-10+ like-protein
C3496_RS07340	PF01207	Dihydrouridine synthase (Dus)
C3496_RS07345	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS07345	PF13426	PAS domain
C3496_RS07345	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS07345	PF00989	PAS fold
C3496_RS07345	PF13188	PAS domain
C3496_RS07350	PF07308	Protein of unknown function (DUF1456)
C3496_RS07365	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
C3496_RS07365	PF13378	Enolase C-terminal domain-like
C3496_RS07375	PF03553	Na+/H+ antiporter family
C3496_RS07380	PF01546	Peptidase family M20/M25/M40
C3496_RS07380	PF07687	Peptidase dimerisation domain
C3496_RS07390	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS07390	PF13192	Thioredoxin domain
C3496_RS07395	PF00578	AhpC/TSA family
C3496_RS07400	PF01636	Phosphotransferase enzyme family
C3496_RS07405	PF01008	Initiation factor 2 subunit family
C3496_RS07410	PF00596	Class II Aldolase and Adducin N-terminal domain
C3496_RS07415	PF01032	FecCD transport family
C3496_RS07420	PF01032	FecCD transport family
C3496_RS07425	PF01497	Periplasmic binding protein
C3496_RS07430	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS07440	PF12728	Helix-turn-helix domain
C3496_RS07470	PF00989	PAS fold
C3496_RS07470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS07470	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS07470	PF13426	PAS domain
C3496_RS07470	PF13188	PAS domain
C3496_RS07490	PF10127	RNA repair pathway DNA polymerase beta family
C3496_RS07495	PF07690	Major Facilitator Superfamily
C3496_RS07500	PF00355	Rieske [2Fe-2S] domain
C3496_RS07500	PF01266	FAD dependent oxidoreductase
C3496_RS07510	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS07515	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3496_RS07520	PF00005	ABC transporter
C3496_RS07525	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS07525	PF12729	Four helix bundle sensory module for signal transduction
C3496_RS07525	PF00672	HAMP domain
C3496_RS07530	PF16657	Maltogenic Amylase, C-terminal domain
C3496_RS07530	PF00128	Alpha amylase, catalytic domain
C3496_RS07535	PF00367	phosphotransferase system, EIIB
C3496_RS07535	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
C3496_RS07535	PF02378	Phosphotransferase system, EIIC 
C3496_RS07540	PF03372	Endonuclease/Exonuclease/phosphatase family
C3496_RS07545	PF01061	ABC-2 type transporter
C3496_RS07550	PF01751	Toprim domain
C3496_RS07550	PF01131	DNA topoisomerase
C3496_RS07555	PF02110	Hydroxyethylthiazole kinase family
C3496_RS07560	PF02581	Thiamine monophosphate synthase
C3496_RS07570	PF03605	Anaerobic c4-dicarboxylate membrane transporter
C3496_RS07575	PF00672	HAMP domain
C3496_RS07575	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS07580	PF01910	Thiamine-binding protein
C3496_RS07585	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS07595	PF00005	ABC transporter
C3496_RS07600	PF00005	ABC transporter
C3496_RS07600	PF12848	ABC transporter
C3496_RS07605	PF00704	Glycosyl hydrolases family 18
C3496_RS07605	PF00041	Fibronectin type III domain
C3496_RS07625	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS07625	PF08360	QacR-like protein, C-terminal region
C3496_RS07645	PF11700	Vacuole effluxer Atg22 like
C3496_RS07660	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3496_RS07660	PF09180	Prolyl-tRNA synthetase, C-terminal
C3496_RS07660	PF03129	Anticodon binding domain
C3496_RS07670	PF08239	Bacterial SH3 domain
C3496_RS07670	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
C3496_RS07670	PF05036	Sporulation related domain
C3496_RS07675	PF00480	ROK family
C3496_RS07680	PF02342	TerD domain
C3496_RS07685	PF02342	TerD domain
C3496_RS07690	PF02342	TerD domain
C3496_RS07695	PF03741	Integral membrane protein TerC family
C3496_RS07700	PF14266	Putative component of 'biosynthetic module'
C3496_RS07705	PF05816	Toxic anion resistance protein (TelA)
C3496_RS07710	PF00690	Cation transporter/ATPase, N-terminus
C3496_RS07710	PF00689	Cation transporting ATPase, C-terminus
C3496_RS07715	PF06569	Protein of unknown function (DUF1128)
C3496_RS07720	PF01451	Low molecular weight phosphotyrosine protein phosphatase
C3496_RS07730	PF03631	Virulence factor BrkB
C3496_RS07740	PF00892	EamA-like transporter family
C3496_RS07750	PF10502	Signal peptidase, peptidase S26 
C3496_RS07760	PF09335	SNARE associated Golgi protein
C3496_RS07775	PF16242	Pyridoxamine 5'-phosphate oxidase like
C3496_RS07780	PF01699	Sodium/calcium exchanger protein
C3496_RS07785	PF14167	YfkD-like protein
C3496_RS07790	PF08756	YfkB-like domain
C3496_RS07790	PF04055	Radical SAM superfamily
C3496_RS07800	PF05681	Fumarate hydratase (Fumerase)
C3496_RS07800	PF05683	Fumarase C-terminus
C3496_RS07805	PF01522	Polysaccharide deacetylase
C3496_RS07810	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3496_RS07815	PF01938	TRAM domain
C3496_RS07815	PF05958	tRNA (Uracil-5-)-methyltransferase
C3496_RS07820	PF01416	tRNA pseudouridine synthase
C3496_RS07830	PF13426	PAS domain
C3496_RS07830	PF00158	Sigma-54 interaction domain
C3496_RS07830	PF02954	Bacterial regulatory protein, Fis family
C3496_RS07840	PF00324	Amino acid permease
C3496_RS07845	PF01546	Peptidase family M20/M25/M40
C3496_RS07845	PF07687	Peptidase dimerisation domain
C3496_RS07870	PF04960	Glutaminase
C3496_RS07875	PF00367	phosphotransferase system, EIIB
C3496_RS07875	PF02378	Phosphotransferase system, EIIC 
C3496_RS07880	PF00144	Beta-lactamase
C3496_RS07900	PF00535	Glycosyl transferase family 2
C3496_RS07905	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
C3496_RS07905	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
C3496_RS07905	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
C3496_RS07910	PF02911	Formyl transferase, C-terminal domain
C3496_RS07910	PF00551	Formyl transferase
C3496_RS07910	PF01370	NAD dependent epimerase/dehydratase family
C3496_RS07915	PF00535	Glycosyl transferase family 2
C3496_RS07920	PF01228	Glycine radical
C3496_RS07920	PF02901	Pyruvate formate lyase-like
C3496_RS07925	PF04055	Radical SAM superfamily
C3496_RS07930	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase
C3496_RS07930	PF04101	Glycosyltransferase family 28 C-terminal domain
C3496_RS07945	PF01979	Amidohydrolase family
C3496_RS07950	PF01370	NAD dependent epimerase/dehydratase family
C3496_RS07950	PF08338	Domain of unknown function (DUF1731)
C3496_RS07955	PF02631	RecX family
C3496_RS07970	PF08176	Small acid-soluble spore protein K family
C3496_RS07975	PF14043	WVELL protein
C3496_RS07980	PF04307	LexA-binding, inner membrane-associated putative hydrolase
C3496_RS07985	PF14815	NUDIX domain
C3496_RS07985	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3496_RS07995	PF04259	Small, acid-soluble spore protein, gamma-type 
C3496_RS08000	PF14182	YgaB-like protein
C3496_RS08005	PF04167	Protein of unknown function (DUF402)
C3496_RS08010	PF00664	ABC transporter transmembrane region
C3496_RS08010	PF00005	ABC transporter
C3496_RS08015	PF06081	Aromatic acid exporter family member 1
C3496_RS08020	PF01493	GXGXG motif
C3496_RS08020	PF01645	Conserved region in glutamate synthase
C3496_RS08020	PF04898	Glutamate synthase central domain
C3496_RS08020	PF00310	Glutamine amidotransferases class-II
C3496_RS08025	PF00202	Aminotransferase class-III
C3496_RS08030	PF00005	ABC transporter
C3496_RS08045	PF07885	Ion channel
C3496_RS08050	PF00578	AhpC/TSA family
C3496_RS08055	PF01475	Ferric uptake regulator family
C3496_RS08060	PF11023	Zinc-ribbon containing domain
C3496_RS08160	PF01709	Transcriptional regulator
C3496_RS08165	PF00293	NUDIX domain
C3496_RS08165	PF13344	Haloacid dehalogenase-like hydrolase
C3496_RS08170	PF00912	Transglycosylase
C3496_RS08170	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS08175	PF13462	Thioredoxin
C3496_RS08185	PF08331	Domain of unknown function (DUF1730)
C3496_RS08190	PF12671	Putative amidase domain
C3496_RS08195	PF00588	SpoU rRNA Methylase family
C3496_RS08200	PF00990	Diguanylate cyclase, GGDEF domain
C3496_RS08200	PF00563	EAL domain
C3496_RS08200	PF03707	Bacterial signalling protein N terminal repeat
C3496_RS08205	PF06798	PrkA serine protein kinase C-terminal domain
C3496_RS08205	PF08298	PrkA AAA domain
C3496_RS08210	PF04285	Protein of unknown function (DUF444)
C3496_RS08225	PF02028	BCCT, betaine/carnitine/choline family transporter
C3496_RS08230	PF08453	Peptidase family M9 N-terminal
C3496_RS08230	PF01752	Collagenase
C3496_RS08230	PF18496	Collagenase G catalytic helper subdomain
C3496_RS08240	PF01145	SPFH domain / Band 7 family
C3496_RS08240	PF15975	Flotillin
C3496_RS08245	PF02743	Cache domain
C3496_RS08245	PF00672	HAMP domain
C3496_RS08245	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS08250	PF00989	PAS fold
C3496_RS08250	PF17203	Single cache domain 3
C3496_RS08250	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS08250	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
C3496_RS08255	PF00072	Response regulator receiver domain
C3496_RS08255	PF12431	Transcriptional regulator 
C3496_RS08260	PF03600	Citrate transporter
C3496_RS08285	PF04309	Glycerol-3-phosphate responsive antiterminator
C3496_RS08290	PF00005	ABC transporter
C3496_RS08290	PF17912	MalK OB fold domain
C3496_RS08295	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS08300	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS08305	PF13416	Bacterial extracellular solute-binding protein
C3496_RS08310	PF00149	Calcineurin-like phosphoesterase
C3496_RS08315	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS08315	PF00072	Response regulator receiver domain
C3496_RS08320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS08320	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS08330	PF13529	Peptidase_C39 like family
C3496_RS08335	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS08335	PF02743	Cache domain
C3496_RS08335	PF00672	HAMP domain
C3496_RS08340	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
C3496_RS08340	PF17203	Single cache domain 3
C3496_RS08340	PF00989	PAS fold
C3496_RS08340	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS08345	PF00072	Response regulator receiver domain
C3496_RS08350	PF03390	2-hydroxycarboxylate transporter family
C3496_RS08355	PF00390	Malic enzyme, N-terminal domain
C3496_RS08355	PF03949	Malic enzyme, NAD binding domain
C3496_RS08365	PF00892	EamA-like transporter family
C3496_RS08370	PF00155	Aminotransferase class I and II
C3496_RS08370	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS08380	PF00672	HAMP domain
C3496_RS08380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS08380	PF18698	Histidine kinase sensor domain
C3496_RS08380	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS08380	PF00989	PAS fold
C3496_RS08385	PF00072	Response regulator receiver domain
C3496_RS08385	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS08390	PF13508	Acetyltransferase (GNAT) domain
C3496_RS08390	PF00583	Acetyltransferase (GNAT) family
C3496_RS08395	PF02634	FdhD/NarQ family
C3496_RS08400	PF00037	4Fe-4S binding domain
C3496_RS08400	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
C3496_RS08400	PF01568	Molydopterin dinucleotide binding domain
C3496_RS08400	PF00384	Molybdopterin oxidoreductase
C3496_RS08400	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C3496_RS08405	PF07849	Protein of unknown function (DUF1641)
C3496_RS08415	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
C3496_RS08415	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
C3496_RS08420	PF13520	Amino acid permease
C3496_RS08425	PF01022	Bacterial regulatory protein, arsR family
C3496_RS08430	PF00403	Heavy-metal-associated domain
C3496_RS08435	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
C3496_RS08435	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
C3496_RS08435	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
C3496_RS08450	PF01447	Thermolysin metallopeptidase, catalytic domain
C3496_RS08450	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3496_RS08450	PF03413	Peptidase propeptide and YPEB domain
C3496_RS08450	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3496_RS08470	PF04294	VanW like protein
C3496_RS08475	PF03816	Cell envelope-related transcriptional attenuator domain
C3496_RS08480	PF07662	Na+ dependent nucleoside transporter C-terminus
C3496_RS08480	PF01773	Na+ dependent nucleoside transporter N-terminus
C3496_RS08485	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS08490	PF03471	Transporter associated domain
C3496_RS08490	PF01595	Cyclin M transmembrane N-terminal domain
C3496_RS08490	PF00571	CBS domain
C3496_RS08495	PF10415	Fumarase C C-terminus
C3496_RS08495	PF00206	Lyase
C3496_RS08500	PF02652	L-lactate permease
C3496_RS08505	PF01022	Bacterial regulatory protein, arsR family
C3496_RS08510	PF08141	Small acid-soluble spore protein H family
C3496_RS08515	PF00854	POT family
C3496_RS08520	PF01497	Periplasmic binding protein
C3496_RS08525	PF01032	FecCD transport family
C3496_RS08530	PF01032	FecCD transport family
C3496_RS08535	PF00005	ABC transporter
C3496_RS08540	PF08241	Methyltransferase domain
C3496_RS08545	PF00155	Aminotransferase class I and II
C3496_RS08550	PF01370	NAD dependent epimerase/dehydratase family
C3496_RS08555	PF00156	Phosphoribosyl transferase domain
C3496_RS08560	PF13344	Haloacid dehalogenase-like hydrolase
C3496_RS08560	PF00293	NUDIX domain
C3496_RS08565	PF00092	von Willebrand factor type A domain
C3496_RS08570	PF07728	AAA domain (dynein-related subfamily)
C3496_RS08575	PF13091	PLD-like domain
C3496_RS08575	PF13396	Phospholipase_D-nuclease N-terminal
C3496_RS08590	PF00563	EAL domain
C3496_RS08590	PF00990	Diguanylate cyclase, GGDEF domain
C3496_RS08590	PF03707	Bacterial signalling protein N terminal repeat
C3496_RS08595	PF13520	Amino acid permease
C3496_RS08600	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS08600	PF07702	UTRA domain
C3496_RS08605	PF02378	Phosphotransferase system, EIIC 
C3496_RS08605	PF00367	phosphotransferase system, EIIB
C3496_RS08610	PF00128	Alpha amylase, catalytic domain
C3496_RS08610	PF16657	Maltogenic Amylase, C-terminal domain
C3496_RS08625	PF03323	Bacillus/Clostridium GerA spore germination protein
C3496_RS08635	PF01636	Phosphotransferase enzyme family
C3496_RS08640	PF01235	Sodium:alanine symporter family
C3496_RS08645	PF00005	ABC transporter
C3496_RS08650	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3496_RS08655	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS08660	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS08665	PF00324	Amino acid permease
C3496_RS08690	PF13280	WYL domain
C3496_RS08690	PF08279	HTH domain
C3496_RS08695	PF01872	RibD C-terminal domain
C3496_RS08700	PF18698	Histidine kinase sensor domain
C3496_RS08700	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS08700	PF00672	HAMP domain
C3496_RS08700	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS08700	PF00989	PAS fold
C3496_RS08705	PF00072	Response regulator receiver domain
C3496_RS08705	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS08715	PF00916	Sulfate permease family
C3496_RS08715	PF01740	STAS domain
C3496_RS08720	PF00582	Universal stress protein family
C3496_RS08730	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS08735	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS08740	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS08745	PF00005	ABC transporter
C3496_RS08745	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3496_RS08750	PF00005	ABC transporter
C3496_RS08750	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3496_RS08755	PF07690	Major Facilitator Superfamily
C3496_RS08760	PF01047	MarR family
C3496_RS08765	PF07690	Major Facilitator Superfamily
C3496_RS08770	PF00356	Bacterial regulatory proteins, lacI family
C3496_RS08775	PF00294	pfkB family carbohydrate kinase
C3496_RS08780	PF05025	RbsD / FucU transport protein family
C3496_RS08785	PF00005	ABC transporter
C3496_RS08790	PF02653	Branched-chain amino acid transport system / permease component
C3496_RS08795	PF13407	Periplasmic binding protein domain
C3496_RS08800	PF00923	Transaldolase/Fructose-6-phosphate aldolase
C3496_RS08805	PF05547	Immune inhibitor A peptidase M6
C3496_RS08810	PF05036	Sporulation related domain
C3496_RS08810	PF01520	N-acetylmuramoyl-L-alanine amidase
C3496_RS08820	PF00107	Zinc-binding dehydrogenase
C3496_RS08820	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS08830	PF00882	Zinc dependent phospholipase C
C3496_RS08835	PF03372	Endonuclease/Exonuclease/phosphatase family
C3496_RS08860	PF02673	Bacitracin resistance protein BacA
C3496_RS08865	PF02743	Cache domain
C3496_RS08865	PF00672	HAMP domain
C3496_RS08865	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS08870	PF01476	LysM domain
C3496_RS08870	PF06725	3D domain
C3496_RS08875	PF01381	Helix-turn-helix
C3496_RS08885	PF04203	Sortase domain
C3496_RS08890	PF00854	POT family
C3496_RS08895	PF05525	Branched-chain amino acid transport protein
C3496_RS08910	PF00324	Amino acid permease
C3496_RS08915	PF00860	Permease family
C3496_RS08930	PF13673	Acetyltransferase (GNAT) domain
C3496_RS08940	PF02080	TrkA-C domain
C3496_RS08940	PF02254	TrkA-N domain
C3496_RS08940	PF00999	Sodium/hydrogen exchanger family
C3496_RS08950	PF00510	Cytochrome c oxidase subunit III
C3496_RS08955	PF00115	Cytochrome C and Quinol oxidase polypeptide I
C3496_RS08960	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
C3496_RS08965	PF00324	Amino acid permease
C3496_RS08970	PF13529	Peptidase_C39 like family
C3496_RS08975	PF01546	Peptidase family M20/M25/M40
C3496_RS08975	PF07687	Peptidase dimerisation domain
C3496_RS08980	PF11755	Protein of unknown function (DUF3311)
C3496_RS08985	PF00474	Sodium:solute symporter family
C3496_RS08990	PF03323	Bacillus/Clostridium GerA spore germination protein
C3496_RS08995	PF03845	Spore germination protein
C3496_RS09000	PF05504	Spore germination B3/ GerAC like, C-terminal 
C3496_RS09010	PF17910	FeoB cytosolic helical domain
C3496_RS09010	PF07664	Ferrous iron transport protein B C terminus
C3496_RS09010	PF07670	Nucleoside recognition
C3496_RS09010	PF02421	Ferrous iron transport protein B
C3496_RS09015	PF07664	Ferrous iron transport protein B C terminus
C3496_RS09015	PF17910	FeoB cytosolic helical domain
C3496_RS09015	PF07670	Nucleoside recognition
C3496_RS09015	PF02421	Ferrous iron transport protein B
C3496_RS09020	PF07670	Nucleoside recognition
C3496_RS09020	PF17910	FeoB cytosolic helical domain
C3496_RS09020	PF02421	Ferrous iron transport protein B
C3496_RS09020	PF04023	FeoA domain
C3496_RS09020	PF07664	Ferrous iron transport protein B C terminus
C3496_RS09025	PF12849	PBP superfamily domain
C3496_RS09030	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS09035	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS09045	PF00873	AcrB/AcrD/AcrF family
C3496_RS09165	PF00571	CBS domain
C3496_RS09180	PF08239	Bacterial SH3 domain
C3496_RS09180	PF00246	Zinc carboxypeptidase
C3496_RS09185	PF03070	TENA/THI-4/PQQC family
C3496_RS09190	PF00005	ABC transporter
C3496_RS09195	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS09200	PF09084	NMT1/THI5 like
C3496_RS09205	PF02581	Thiamine monophosphate synthase
C3496_RS09210	PF01266	FAD dependent oxidoreductase
C3496_RS09215	PF02597	ThiS family
C3496_RS09220	PF05690	Thiazole biosynthesis protein ThiG
C3496_RS09225	PF00899	ThiF family
C3496_RS09230	PF08543	Phosphomethylpyrimidine kinase
C3496_RS09255	PF03814	Potassium-transporting ATPase A subunit
C3496_RS09265	PF02669	K+-transporting ATPase, c chain
C3496_RS09270	PF02702	Osmosensitive K+ channel His kinase sensor domain
C3496_RS09275	PF07690	Major Facilitator Superfamily
C3496_RS09280	PF01047	MarR family
C3496_RS09295	PF00860	Permease family
C3496_RS09305	PF03734	L,D-transpeptidase catalytic domain
C3496_RS09305	PF17969	L,D-transpeptidase C-terminal domain
C3496_RS09320	PF00085	Thioredoxin
C3496_RS09325	PF02600	Disulfide bond formation protein DsbB
C3496_RS09330	PF14148	YhdB-like protein
C3496_RS09340	PF03845	Spore germination protein
C3496_RS09350	PF03323	Bacillus/Clostridium GerA spore germination protein
C3496_RS09360	PF00881	Nitroreductase family
C3496_RS09365	PF04293	SpoVR like protein
C3496_RS09375	PF09339	IclR helix-turn-helix domain
C3496_RS09375	PF01614	Bacterial transcriptional regulator
C3496_RS09390	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS09390	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3496_RS09395	PF02583	Metal-sensitive transcriptional repressor
C3496_RS09400	PF00581	Rhodanese-like domain
C3496_RS09400	PF01206	Sulfurtransferase TusA
C3496_RS09405	PF00753	Metallo-beta-lactamase superfamily
C3496_RS09405	PF00581	Rhodanese-like domain
C3496_RS09410	PF01206	Sulfurtransferase TusA
C3496_RS09415	PF01206	Sulfurtransferase TusA
C3496_RS09420	PF01206	Sulfurtransferase TusA
C3496_RS09420	PF00581	Rhodanese-like domain
C3496_RS09430	PF13686	DsrE/DsrF/DrsH-like family
C3496_RS09435	PF01925	Sulfite exporter TauE/SafE
C3496_RS09445	PF03816	Cell envelope-related transcriptional attenuator domain
C3496_RS09450	PF00107	Zinc-binding dehydrogenase
C3496_RS09450	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS09460	PF07690	Major Facilitator Superfamily
C3496_RS09470	PF05043	Mga helix-turn-helix domain
C3496_RS09470	PF08279	HTH domain
C3496_RS09470	PF00874	PRD domain
C3496_RS09470	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
C3496_RS09475	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
C3496_RS09480	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
C3496_RS09485	PF02378	Phosphotransferase system, EIIC 
C3496_RS09500	PF01476	LysM domain
C3496_RS09500	PF06725	3D domain
C3496_RS09505	PF02687	FtsX-like permease family
C3496_RS09505	PF12704	MacB-like periplasmic core domain
C3496_RS09510	PF00005	ABC transporter
C3496_RS09520	PF09529	Integral membrane protein (intg_mem_TP0381)
C3496_RS09535	PF02687	FtsX-like permease family
C3496_RS09540	PF05525	Branched-chain amino acid transport protein
C3496_RS09545	PF05067	Manganese containing catalase
C3496_RS09550	PF12652	CotJB protein
C3496_RS09555	PF11007	Spore coat associated protein JA (CotJA)
C3496_RS09570	PF02735	Ku70/Ku80 beta-barrel domain
C3496_RS09580	PF09335	SNARE associated Golgi protein
C3496_RS09615	PF13520	Amino acid permease
C3496_RS09620	PF00999	Sodium/hydrogen exchanger family
C3496_RS09630	PF01418	Helix-turn-helix domain, rpiR family
C3496_RS09630	PF01380	SIS domain
C3496_RS09635	PF13580	SIS domain
C3496_RS09640	PF00367	phosphotransferase system, EIIB
C3496_RS09640	PF02378	Phosphotransferase system, EIIC 
C3496_RS09650	PF07681	DoxX
C3496_RS09665	PF00892	EamA-like transporter family
C3496_RS09670	PF01037	Lrp/AsnC ligand binding domain
C3496_RS09680	PF00893	Small Multidrug Resistance protein
C3496_RS09685	PF00893	Small Multidrug Resistance protein
C3496_RS09690	PF17934	Tetracyclin repressor-like, C-terminal domain
C3496_RS09690	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS09695	PF07690	Major Facilitator Superfamily
C3496_RS09700	PF01638	HxlR-like helix-turn-helix
C3496_RS09710	PF02525	Flavodoxin-like fold
C3496_RS09715	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS09715	PF12793	Sugar transport-related sRNA regulator N-term
C3496_RS09720	PF07690	Major Facilitator Superfamily
C3496_RS09730	PF01965	DJ-1/PfpI family
C3496_RS09735	PF18011	C-terminal domain found in long catalases
C3496_RS09735	PF00199	Catalase
C3496_RS09735	PF06628	Catalase-related immune-responsive
C3496_RS09745	PF13520	Amino acid permease
C3496_RS09750	PF01177	Asp/Glu/Hydantoin racemase
C3496_RS09760	PF00171	Aldehyde dehydrogenase family
C3496_RS09765	PF00664	ABC transporter transmembrane region
C3496_RS09765	PF00005	ABC transporter
C3496_RS09770	PF00664	ABC transporter transmembrane region
C3496_RS09770	PF00005	ABC transporter
C3496_RS09775	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3496_RS09780	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS09785	PF00005	ABC transporter
C3496_RS09790	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3496_RS09800	PF14398	YheC/D like ATP-grasp
C3496_RS09810	PF04286	Protein of unknown function (DUF445)
C3496_RS09815	PF06133	Control of competence regulator ComK, YlbF/YmcA
C3496_RS09830	PF00205	Thiamine pyrophosphate enzyme, central domain
C3496_RS09830	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3496_RS09830	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3496_RS09835	PF03306	Alpha-acetolactate decarboxylase
C3496_RS09840	PF02245	Methylpurine-DNA glycosylase (MPG)
C3496_RS09860	PF04055	Radical SAM superfamily
C3496_RS09865	PF00501	AMP-binding enzyme
C3496_RS09865	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS09880	PF00916	Sulfate permease family
C3496_RS09880	PF01740	STAS domain
C3496_RS09890	PF00378	Enoyl-CoA hydratase/isomerase
C3496_RS09905	PF05343	M42 glutamyl aminopeptidase
C3496_RS09920	PF11121	Protein of unknown function (DUF2639)
C3496_RS09925	PF05544	Proline racemase
C3496_RS09930	PF02423	Ornithine cyclodeaminase/mu-crystallin family
C3496_RS09945	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS09950	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS09955	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS09955	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3496_RS09960	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3496_RS09960	PF00005	ABC transporter
C3496_RS09965	PF00005	ABC transporter
C3496_RS09965	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3496_RS09975	PF00083	Sugar (and other) transporter
C3496_RS09980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS09980	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
C3496_RS09985	PF12431	Transcriptional regulator 
C3496_RS09985	PF00072	Response regulator receiver domain
C3496_RS09985	PF08279	HTH domain
C3496_RS09990	PF03401	Tripartite tricarboxylate transporter family receptor
C3496_RS10070	PF02384	N-6 DNA Methylase
C3496_RS10080	PF11867	Domain of unknown function (DUF3387)
C3496_RS10080	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
C3496_RS10080	PF18766	SWI2/SNF2 ATPase
C3496_RS10095	PF13411	MerR HTH family regulatory protein
C3496_RS10095	PF06445	GyrI-like small molecule binding domain
C3496_RS10110	PF00772	DnaB-like helicase N terminal domain
C3496_RS10110	PF03796	DnaB-like helicase C terminal domain
C3496_RS10120	PF01925	Sulfite exporter TauE/SafE
C3496_RS10135	PF07690	Major Facilitator Superfamily
C3496_RS10185	PF07993	Male sterility protein
C3496_RS10185	PF00550	Phosphopantetheine attachment site
C3496_RS10190	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS10190	PF18665	Tetracyclin repressor-like, C-terminal domain
C3496_RS10200	PF00874	PRD domain
C3496_RS10200	PF03123	CAT RNA binding domain
C3496_RS10205	PF02378	Phosphotransferase system, EIIC 
C3496_RS10205	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
C3496_RS10205	PF00367	phosphotransferase system, EIIB
C3496_RS10210	PF00232	Glycosyl hydrolase family 1
C3496_RS10220	PF01066	CDP-alcohol phosphatidyltransferase
C3496_RS10255	PF02733	Dak1 domain
C3496_RS10265	PF02733	Dak1 domain
C3496_RS10310	PF00072	Response regulator receiver domain
C3496_RS10310	PF01966	HD domain
C3496_RS10355	PF11181	Heat induced stress protein YflT
C3496_RS10360	PF05532	CsbD-like
C3496_RS10375	PF01740	STAS domain
C3496_RS10380	PF13581	Histidine kinase-like ATPase domain
C3496_RS10385	PF04539	Sigma-70 region 3
C3496_RS10385	PF04545	Sigma-70, region 4
C3496_RS10385	PF04542	Sigma-70 region 2 
C3496_RS10395	PF13426	PAS domain
C3496_RS10395	PF07228	Stage II sporulation protein E (SpoIIE)
C3496_RS10400	PF01739	CheR methyltransferase, SAM binding domain
C3496_RS10400	PF03705	CheR methyltransferase, all-alpha domain
C3496_RS10405	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS10405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS10405	PF00072	Response regulator receiver domain
C3496_RS10405	PF01627	Hpt domain
C3496_RS10430	PF01906	Putative heavy-metal-binding
C3496_RS10440	PF12323	Helix-turn-helix domain
C3496_RS10440	PF07282	Putative transposase DNA-binding domain
C3496_RS10440	PF01385	Probable transposase
C3496_RS10450	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS10450	PF07730	Histidine kinase
C3496_RS10455	PF00196	Bacterial regulatory proteins, luxR family
C3496_RS10455	PF00072	Response regulator receiver domain
C3496_RS10470	PF11121	Protein of unknown function (DUF2639)
C3496_RS10485	PF00149	Calcineurin-like phosphoesterase
C3496_RS10490	PF13514	AAA domain
C3496_RS10495	PF01966	HD domain
C3496_RS10495	PF01336	OB-fold nucleic acid binding domain
C3496_RS10525	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS10530	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS10535	PF18801	response regulator aspartate phosphatase H, N terminal
C3496_RS10540	PF00561	alpha/beta hydrolase fold
C3496_RS10540	PF08386	TAP-like protein
C3496_RS10565	PF04309	Glycerol-3-phosphate responsive antiterminator
C3496_RS10570	PF00230	Major intrinsic protein
C3496_RS10575	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
C3496_RS10575	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
C3496_RS10580	PF01266	FAD dependent oxidoreductase
C3496_RS10580	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
C3496_RS10595	PF04542	Sigma-70 region 2 
C3496_RS10595	PF08281	Sigma-70, region 4
C3496_RS10605	PF01098	Cell cycle protein
C3496_RS10620	PF07690	Major Facilitator Superfamily
C3496_RS10625	PF07690	Major Facilitator Superfamily
C3496_RS10635	PF13538	UvrD-like helicase C-terminal domain
C3496_RS10655	PF01047	MarR family
C3496_RS10660	PF12732	YtxH-like protein
C3496_RS10665	PF01230	HIT domain
C3496_RS10670	PF00005	ABC transporter
C3496_RS10675	PF05975	Bacterial ABC transporter protein EcsB
C3496_RS10680	PF12787	EcsC protein family
C3496_RS10755	PF17934	Tetracyclin repressor-like, C-terminal domain
C3496_RS10755	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS10760	PF03703	Bacterial PH domain
C3496_RS10765	PF03703	Bacterial PH domain
C3496_RS10785	PF03703	Bacterial PH domain
C3496_RS10790	PF03703	Bacterial PH domain
C3496_RS10795	PF03992	Antibiotic biosynthesis monooxygenase
C3496_RS10800	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS10800	PF00912	Transglycosylase
C3496_RS10805	PF01208	Uroporphyrinogen decarboxylase (URO-D)
C3496_RS10810	PF00762	Ferrochelatase
C3496_RS10815	PF01593	Flavin containing amine oxidoreductase
C3496_RS10840	PF03965	Penicillinase repressor
C3496_RS10850	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS10850	PF17932	Tetracyclin repressor-like, C-terminal domain
C3496_RS10870	PF13302	Acetyltransferase (GNAT) domain
C3496_RS10880	PF13280	WYL domain
C3496_RS10880	PF08279	HTH domain
C3496_RS10885	PF00356	Bacterial regulatory proteins, lacI family
C3496_RS10890	PF14149	YhfH-like protein
C3496_RS10895	PF12706	Beta-lactamase superfamily domain
C3496_RS10900	PF10437	Bacterial lipoate protein ligase C-terminus
C3496_RS10900	PF03099	Biotin/lipoate A/B protein ligase family
C3496_RS10910	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS10910	PF00501	AMP-binding enzyme
C3496_RS10935	PF07968	Leukocidin/Hemolysin toxin family
C3496_RS10940	PF00149	Calcineurin-like phosphoesterase
C3496_RS10950	PF01966	HD domain
C3496_RS10955	PF01638	HxlR-like helix-turn-helix
C3496_RS10960	PF07690	Major Facilitator Superfamily
C3496_RS10970	PF04542	Sigma-70 region 2 
C3496_RS10970	PF08281	Sigma-70, region 4
C3496_RS10975	PF12833	Helix-turn-helix domain
C3496_RS10975	PF06445	GyrI-like small molecule binding domain
C3496_RS10990	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS10990	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS10995	PF00072	Response regulator receiver domain
C3496_RS10995	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS11020	PF16491	CAAX prenyl protease N-terminal, five membrane helices
C3496_RS11020	PF01435	Peptidase family M48
C3496_RS11025	PF02743	Cache domain
C3496_RS11025	PF00672	HAMP domain
C3496_RS11025	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS11030	PF00892	EamA-like transporter family
C3496_RS11040	PF01274	Malate synthase
C3496_RS11045	PF00463	Isocitrate lyase family
C3496_RS11055	PF00313	'Cold-shock' DNA-binding domain
C3496_RS11070	PF06338	ComK protein
C3496_RS11075	PF09335	SNARE associated Golgi protein
C3496_RS11080	PF10502	Signal peptidase, peptidase S26 
C3496_RS11085	PF13361	UvrD-like helicase C-terminal domain
C3496_RS11085	PF12705	PD-(D/E)XK nuclease superfamily
C3496_RS11090	PF13361	UvrD-like helicase C-terminal domain
C3496_RS11090	PF00580	UvrD/REP helicase N-terminal domain
C3496_RS11090	PF12705	PD-(D/E)XK nuclease superfamily
C3496_RS11100	PF10676	Spore germination protein gerPA/gerPF
C3496_RS11105	PF10970	Spore germination protein GerPE 
C3496_RS11115	PF10737	Spore germination protein GerPC
C3496_RS11120	PF10803	Spore germination GerPB
C3496_RS11125	PF10676	Spore germination protein gerPA/gerPF
C3496_RS11130	PF09388	Spo0E like sporulation regulatory protein
C3496_RS11135	PF01557	Fumarylacetoacetate (FAA) hydrolase family
C3496_RS11145	PF00202	Aminotransferase class-III
C3496_RS11150	PF07457	Protein of unknown function (DUF1516)
C3496_RS11160	PF00733	Asparagine synthase
C3496_RS11160	PF13537	Glutamine amidotransferase domain
C3496_RS11165	PF00762	Ferrochelatase
C3496_RS11170	PF00199	Catalase
C3496_RS11170	PF06628	Catalase-related immune-responsive
C3496_RS11175	PF00909	Ammonium Transporter Family
C3496_RS11180	PF00128	Alpha amylase, catalytic domain
C3496_RS11190	PF04461	Protein of unknown function (DUF520)
C3496_RS11195	PF13509	S1 domain
C3496_RS11195	PF17783	CvfB-like winged helix domain
C3496_RS11200	PF00639	PPIC-type PPIASE domain
C3496_RS11210	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3496_RS11210	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS11215	PF12758	Protein of unknown function (DUF3813)
C3496_RS11230	PF14168	YjzC-like protein
C3496_RS11235	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3496_RS11235	PF07724	AAA domain (Cdc48 subfamily)
C3496_RS11235	PF00004	ATPase family associated with various cellular activities (AAA)
C3496_RS11235	PF02861	Clp amino terminal domain, pathogenicity island component
C3496_RS11235	PF17871	AAA lid domain
C3496_RS11255	PF10815	ComZ
C3496_RS11260	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
C3496_RS11260	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
C3496_RS11265	PF02801	Beta-ketoacyl synthase, C-terminal domain
C3496_RS11265	PF00109	Beta-ketoacyl synthase, N-terminal domain
C3496_RS11270	PF10026	Predicted Zn-dependent protease (DUF2268)
C3496_RS11275	PF12227	Protein of unknown function (DUF3603)
C3496_RS11280	PF00579	tRNA synthetases class I (W and Y)
C3496_RS11290	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS11295	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS11300	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS11300	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3496_RS11305	PF00005	ABC transporter
C3496_RS11305	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3496_RS11310	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3496_RS11310	PF00005	ABC transporter
C3496_RS11315	PF01554	MatE
C3496_RS11320	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS11330	PF03960	ArsC family
C3496_RS11335	PF03741	Integral membrane protein TerC family
C3496_RS11340	PF05389	Negative regulator of genetic competence (MecA)
C3496_RS11345	PF13091	PLD-like domain
C3496_RS11345	PF13396	Phospholipase_D-nuclease N-terminal
C3496_RS11355	PF08439	Oligopeptidase F
C3496_RS11355	PF01432	Peptidase family M3
C3496_RS11370	PF01152	Bacterial-like globin
C3496_RS11375	PF01928	CYTH domain
C3496_RS11385	PF04607	Region found in RelA / SpoT proteins
C3496_RS11390	PF01513	ATP-NAD kinase
C3496_RS11395	PF00849	RNA pseudouridylate synthase
C3496_RS11405	PF00149	Calcineurin-like phosphoesterase
C3496_RS11410	PF01098	Cell cycle protein
C3496_RS11415	PF00535	Glycosyl transferase family 2
C3496_RS11420	PF08241	Methyltransferase domain
C3496_RS11425	PF05711	Macrocin-O-methyltransferase (TylF)
C3496_RS11435	PF13181	Tetratricopeptide repeat
C3496_RS11435	PF00535	Glycosyl transferase family 2
C3496_RS11455	PF00483	Nucleotidyl transferase
C3496_RS11460	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
C3496_RS11465	PF16363	GDP-mannose 4,6 dehydratase
C3496_RS11470	PF04321	RmlD substrate binding domain
C3496_RS11490	PF07098	Protein of unknown function (DUF1360)
C3496_RS11510	PF00580	UvrD/REP helicase N-terminal domain
C3496_RS11510	PF13361	UvrD-like helicase C-terminal domain
C3496_RS11515	PF13673	Acetyltransferase (GNAT) domain
C3496_RS11525	PF00756	Putative esterase
C3496_RS11540	PF02368	Bacterial Ig-like domain (group 2)
C3496_RS11545	PF00474	Sodium:solute symporter family
C3496_RS11550	PF04715	Anthranilate synthase component I, N terminal region
C3496_RS11550	PF00425	chorismate binding enzyme
C3496_RS11555	PF00117	Glutamine amidotransferase class-I
C3496_RS11555	PF02885	Glycosyl transferase family, helical bundle domain
C3496_RS11555	PF00591	Glycosyl transferase family, a/b domain
C3496_RS11560	PF02885	Glycosyl transferase family, helical bundle domain
C3496_RS11560	PF00591	Glycosyl transferase family, a/b domain
C3496_RS11565	PF00218	Indole-3-glycerol phosphate synthase
C3496_RS11570	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
C3496_RS11575	PF00291	Pyridoxal-phosphate dependent enzyme
C3496_RS11580	PF00290	Tryptophan synthase alpha chain
C3496_RS11590	PF02652	L-lactate permease
C3496_RS11595	PF10042	Uncharacterized conserved protein (DUF2278)
C3496_RS11620	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS11620	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3496_RS11655	PF02817	e3 binding domain
C3496_RS11655	PF00364	Biotin-requiring enzyme
C3496_RS11655	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3496_RS11660	PF16870	2-oxoglutarate dehydrogenase C-terminal
C3496_RS11660	PF02779	Transketolase, pyrimidine binding domain
C3496_RS11660	PF00676	Dehydrogenase E1 component
C3496_RS11665	PF01381	Helix-turn-helix
C3496_RS11810	PF00589	Phage integrase family
C3496_RS11810	PF02899	Phage integrase, N-terminal SAM-like domain
C3496_RS11820	PF13649	Methyltransferase domain
C3496_RS11830	PF07943	Penicillin-binding protein 5, C-terminal domain
C3496_RS11830	PF00768	D-alanyl-D-alanine carboxypeptidase
C3496_RS11840	PF12389	Camelysin metallo-endopeptidase
C3496_RS11850	PF12389	Camelysin metallo-endopeptidase
C3496_RS11855	PF01381	Helix-turn-helix
C3496_RS11855	PF08671	Anti-repressor SinI
C3496_RS11865	PF05547	Immune inhibitor A peptidase M6
C3496_RS11870	PF00171	Aldehyde dehydrogenase family
C3496_RS11875	PF00005	ABC transporter
C3496_RS11875	PF08402	TOBE domain
C3496_RS11880	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS11885	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS11890	PF13416	Bacterial extracellular solute-binding protein
C3496_RS11900	PF03176	MMPL family
C3496_RS11910	PF01479	S4 domain
C3496_RS11910	PF00849	RNA pseudouridylate synthase
C3496_RS11920	PF00188	Cysteine-rich secretory protein family
C3496_RS11925	PF13183	4Fe-4S dicluster domain
C3496_RS11925	PF02754	Cysteine-rich domain
C3496_RS11930	PF02913	FAD linked oxidases, C-terminal domain
C3496_RS11930	PF01565	FAD binding domain 
C3496_RS11935	PF17853	GGDEF-like domain
C3496_RS11935	PF05651	Putative sugar diacid recognition
C3496_RS11935	PF13556	PucR C-terminal helix-turn-helix domain
C3496_RS11945	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS11945	PF00072	Response regulator receiver domain
C3496_RS11950	PF00672	HAMP domain
C3496_RS11950	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS11950	PF18698	Histidine kinase sensor domain
C3496_RS11950	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS11950	PF00989	PAS fold
C3496_RS11955	PF07729	FCD domain
C3496_RS11955	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS11960	PF02754	Cysteine-rich domain
C3496_RS11965	PF13183	4Fe-4S dicluster domain
C3496_RS11965	PF11870	Domain of unknown function (DUF3390)
C3496_RS11965	PF02589	LUD domain
C3496_RS11970	PF02589	LUD domain
C3496_RS11975	PF06750	Bacterial Peptidase A24 N-terminal domain
C3496_RS11975	PF01478	Type IV leader peptidase family
C3496_RS11985	PF01226	Formate/nitrite transporter
C3496_RS11990	PF03741	Integral membrane protein TerC family
C3496_RS11995	PF02386	Cation transport protein
C3496_RS12000	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3496_RS12005	PF01575	MaoC like domain
C3496_RS12030	PF00561	alpha/beta hydrolase fold
C3496_RS12040	PF02386	Cation transport protein
C3496_RS12060	PF08402	TOBE domain
C3496_RS12060	PF00005	ABC transporter
C3496_RS12065	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS12070	PF13419	Haloacid dehalogenase-like hydrolase
C3496_RS12075	PF00266	Aminotransferase class-V
C3496_RS12085	PF08220	DeoR-like helix-turn-helix domain
C3496_RS12085	PF00455	DeoR C terminal sensor domain
C3496_RS12095	PF00596	Class II Aldolase and Adducin N-terminal domain
C3496_RS12105	PF04748	Divergent polysaccharide deacetylase
C3496_RS12110	PF09388	Spo0E like sporulation regulatory protein
C3496_RS12115	PF02743	Cache domain
C3496_RS12115	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS12115	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS12120	PF01047	MarR family
C3496_RS12130	PF12867	DinB superfamily
C3496_RS12135	PF13426	PAS domain
C3496_RS12135	PF13188	PAS domain
C3496_RS12135	PF00989	PAS fold
C3496_RS12135	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS12135	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS12140	PF06508	Queuosine biosynthesis protein QueC
C3496_RS12145	PF01242	6-pyruvoyl tetrahydropterin synthase
C3496_RS12150	PF04055	Radical SAM superfamily
C3496_RS12155	PF14489	QueF-like protein
C3496_RS12160	PF09953	Uncharacterized protein conserved in bacteria (DUF2187)
C3496_RS12190	PF07972	NrdI Flavodoxin like 
C3496_RS12205	PF00268	Ribonucleotide reductase, small chain
C3496_RS12210	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS12215	PF00005	ABC transporter
C3496_RS12225	PF00005	ABC transporter
C3496_RS12235	PF02517	CPBP intramembrane metalloprotease
C3496_RS12245	PF01037	Lrp/AsnC ligand binding domain
C3496_RS12255	PF00857	Isochorismatase family
C3496_RS12265	PF02016	LD-carboxypeptidase N-terminal domain
C3496_RS12265	PF17676	LD-carboxypeptidase C-terminal domain
C3496_RS12270	PF03060	Nitronate monooxygenase
C3496_RS12275	PF04914	DltD protein
C3496_RS12280	PF00550	Phosphopantetheine attachment site
C3496_RS12285	PF03062	MBOAT, membrane-bound O-acyltransferase family
C3496_RS12290	PF00501	AMP-binding enzyme
C3496_RS12290	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS12300	PF07687	Peptidase dimerisation domain
C3496_RS12300	PF01546	Peptidase family M20/M25/M40
C3496_RS12310	PF00258	Flavodoxin
C3496_RS12325	PF01636	Phosphotransferase enzyme family
C3496_RS12345	PF01554	MatE
C3496_RS12350	PF02673	Bacitracin resistance protein BacA
C3496_RS12365	PF01047	MarR family
C3496_RS12375	PF00375	Sodium:dicarboxylate symporter family
C3496_RS12380	PF02386	Cation transport protein
C3496_RS12390	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
C3496_RS12400	PF03698	Uncharacterised protein family (UPF0180)
C3496_RS12410	PF01063	Amino-transferase class IV
C3496_RS12415	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3496_RS12415	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3496_RS12415	PF00205	Thiamine pyrophosphate enzyme, central domain
C3496_RS12420	PF10369	Small subunit of acetolactate synthase
C3496_RS12420	PF01842	ACT domain
C3496_RS12425	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
C3496_RS12425	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
C3496_RS12430	PF00682	HMGL-like
C3496_RS12430	PF08502	LeuA allosteric (dimerisation) domain
C3496_RS12435	PF00180	Isocitrate/isopropylmalate dehydrogenase
C3496_RS12440	PF00330	Aconitase family (aconitate hydratase)
C3496_RS12445	PF00694	Aconitase C-terminal domain
C3496_RS12450	PF13393	Histidyl-tRNA synthetase
C3496_RS12455	PF01634	ATP phosphoribosyltransferase
C3496_RS12460	PF00815	Histidinol dehydrogenase
C3496_RS12465	PF00475	Imidazoleglycerol-phosphate dehydratase
C3496_RS12470	PF00117	Glutamine amidotransferase class-I
C3496_RS12475	PF00977	Histidine biosynthesis protein
C3496_RS12480	PF00977	Histidine biosynthesis protein
C3496_RS12485	PF01502	Phosphoribosyl-AMP cyclohydrolase
C3496_RS12490	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
C3496_RS12495	PF02811	PHP domain
C3496_RS12505	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3496_RS12505	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
C3496_RS12510	PF01066	CDP-alcohol phosphatidyltransferase
C3496_RS12515	PF00884	Sulfatase
C3496_RS12525	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
C3496_RS12525	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
C3496_RS12535	PF01507	Phosphoadenosine phosphosulfate reductase family
C3496_RS12540	PF14306	PUA-like domain
C3496_RS12540	PF01747	ATP-sulfurylase
C3496_RS12550	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
C3496_RS12550	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
C3496_RS12560	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
C3496_RS12565	PF01903	CbiX
C3496_RS12575	PF00209	Sodium:neurotransmitter symporter family
C3496_RS12585	PF00375	Sodium:dicarboxylate symporter family
C3496_RS12595	PF03553	Na+/H+ antiporter family
C3496_RS12610	PF09922	Cell wall-active antibiotics response 4TMS YvqF
C3496_RS12615	PF00672	HAMP domain
C3496_RS12615	PF07730	Histidine kinase
C3496_RS12615	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS12620	PF00072	Response regulator receiver domain
C3496_RS12620	PF00196	Bacterial regulatory proteins, luxR family
C3496_RS12630	PF05525	Branched-chain amino acid transport protein
C3496_RS12640	PF08241	Methyltransferase domain
C3496_RS12655	PF02163	Peptidase family M50
C3496_RS12665	PF00042	Globin
C3496_RS12665	PF00970	Oxidoreductase FAD-binding domain
C3496_RS12665	PF00175	Oxidoreductase NAD-binding domain 
C3496_RS12680	PF01925	Sulfite exporter TauE/SafE
C3496_RS12685	PF01384	Phosphate transporter family
C3496_RS12690	PF01865	Protein of unknown function DUF47
C3496_RS12695	PF00912	Transglycosylase
C3496_RS12695	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS12710	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS12710	PF00989	PAS fold
C3496_RS12710	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS12715	PF01904	Protein of unknown function DUF72
C3496_RS12725	PF00589	Phage integrase family
C3496_RS12730	PF16736	Single Cache-like 
C3496_RS12730	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS12730	PF00989	PAS fold
C3496_RS12730	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS12735	PF01048	Phosphorylase superfamily
C3496_RS12745	PF09924	Uncharacterised conserved protein (DUF2156)
C3496_RS12745	PF03706	Lysylphosphatidylglycerol synthase TM region
C3496_RS12760	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
C3496_RS12760	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
C3496_RS12765	PF07943	Penicillin-binding protein 5, C-terminal domain
C3496_RS12765	PF00768	D-alanyl-D-alanine carboxypeptidase
C3496_RS12770	PF07670	Nucleoside recognition
C3496_RS12775	PF07670	Nucleoside recognition
C3496_RS12780	PF00849	RNA pseudouridylate synthase
C3496_RS12780	PF01479	S4 domain
C3496_RS12785	PF00578	AhpC/TSA family
C3496_RS12790	PF05140	ResB-like family 
C3496_RS12795	PF01578	Cytochrome C assembly protein
C3496_RS12800	PF00072	Response regulator receiver domain
C3496_RS12800	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS12805	PF18698	Histidine kinase sensor domain
C3496_RS12805	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS12805	PF00672	HAMP domain
C3496_RS12805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS12805	PF00989	PAS fold
C3496_RS12810	PF01923	Cobalamin adenosyltransferase
C3496_RS12815	PF01551	Peptidase family M23
C3496_RS12825	PF12822	ECF transporter, substrate-specific component
C3496_RS12840	PF00271	Helicase conserved C-terminal domain
C3496_RS12840	PF00270	DEAD/DEAH box helicase
C3496_RS12845	PF02517	CPBP intramembrane metalloprotease
C3496_RS12855	PF00149	Calcineurin-like phosphoesterase
C3496_RS12860	PF02607	B12 binding domain
C3496_RS12860	PF02310	B12 binding domain
C3496_RS12860	PF13411	MerR HTH family regulatory protein
C3496_RS12865	PF05389	Negative regulator of genetic competence (MecA)
C3496_RS12870	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
C3496_RS12870	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C3496_RS12895	PF00710	Asparaginase, N-terminal
C3496_RS12895	PF17763	Glutaminase/Asparaginase C-terminal domain
C3496_RS12905	PF02224	Cytidylate kinase
C3496_RS12910	PF00575	S1 RNA binding domain
C3496_RS12915	PF01070	FMN-dependent dehydrogenase
C3496_RS12920	PF14140	YpzI-like protein
C3496_RS12930	PF14045	YIEGIA protein
C3496_RS12940	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
C3496_RS12940	PF01926	50S ribosome-binding GTPase
C3496_RS12945	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
C3496_RS12945	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
C3496_RS12955	PF10966	Protein of unknown function (DUF2768)
C3496_RS12965	PF09547	Stage IV sporulation protein A (spore_IV_A)
C3496_RS12970	PF00216	Bacterial DNA-binding protein
C3496_RS12975	PF01227	GTP cyclohydrolase I
C3496_RS12980	PF07307	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
C3496_RS12985	PF01209	ubiE/COQ5 methyltransferase family
C3496_RS12990	PF00348	Polyprenyl synthetase
C3496_RS12995	PF00334	Nucleoside diphosphate kinase
C3496_RS13000	PF01264	Chorismate synthase
C3496_RS13005	PF01761	3-dehydroquinate synthase
C3496_RS13010	PF00155	Aminotransferase class I and II
C3496_RS13020	PF08858	IDEAL domain
C3496_RS13020	PF08864	UPF0302 domain
C3496_RS13025	PF10673	Protein of unknown function (DUF2487)
C3496_RS13030	PF00355	Rieske [2Fe-2S] domain
C3496_RS13035	PF00033	Cytochrome b/b6/petB
C3496_RS13040	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
C3496_RS13040	PF00032	Cytochrome b(C-terminal)/b6/petD
C3496_RS13045	PF07187	Protein of unknown function (DUF1405)
C3496_RS13055	PF09577	Sporulation protein YpjB (SpoYpjB)
C3496_RS13060	PF04298	Putative neutral zinc metallopeptidase
C3496_RS13070	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS13070	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3496_RS13075	PF03819	MazG nucleotide pyrophosphohydrolase domain
C3496_RS13080	PF01113	Dihydrodipicolinate reductase, N-terminus
C3496_RS13080	PF05173	Dihydrodipicolinate reductase, C-terminus
C3496_RS13085	PF02142	MGS-like domain
C3496_RS13090	PF02585	GlcNAc-PI de-N-acetylase
C3496_RS13095	PF00534	Glycosyl transferases group 1
C3496_RS13095	PF13439	Glycosyltransferase Family 4
C3496_RS13100	PF13735	tRNA nucleotidyltransferase domain 2 putative
C3496_RS13100	PF01743	Poly A polymerase head domain
C3496_RS13100	PF12627	Probable RNA and SrmB- binding site of polymerase A
C3496_RS13105	PF02237	Biotin protein ligase C terminal domain
C3496_RS13105	PF03099	Biotin/lipoate A/B protein ligase family
C3496_RS13105	PF08279	HTH domain
C3496_RS13115	PF02548	Ketopantoate hydroxymethyltransferase
C3496_RS13120	PF02569	Pantoate-beta-alanine ligase
C3496_RS13125	PF02261	Aspartate decarboxylase
C3496_RS13130	PF00929	Exonuclease
C3496_RS13130	PF04851	Type III restriction enzyme, res subunit
C3496_RS13130	PF13307	Helicase C-terminal domain
C3496_RS13135	PF14084	Protein of unknown function (DUF4264)
C3496_RS13145	PF00155	Aminotransferase class I and II
C3496_RS13150	PF07261	Replication initiation and membrane attachment
C3496_RS13155	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3496_RS13155	PF00633	Helix-hairpin-helix motif
C3496_RS13155	PF10576	Iron-sulfur binding domain of endonuclease III
C3496_RS13165	PF00912	Transglycosylase
C3496_RS13165	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS13170	PF03838	Recombination protein U
C3496_RS13175	PF10720	Protein of unknown function (DUF2515)
C3496_RS13210	PF06908	YspA SLOG family
C3496_RS13215	PF05103	DivIVA protein
C3496_RS13225	PF01170	Putative RNA methylase family UPF0020
C3496_RS13225	PF02926	THUMP domain
C3496_RS13235	PF13307	Helicase C-terminal domain
C3496_RS13240	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
C3496_RS13250	PF01636	Phosphotransferase enzyme family
C3496_RS13255	PF00557	Metallopeptidase family M24
C3496_RS13260	PF00156	Phosphoribosyl transferase domain
C3496_RS13265	PF00860	Permease family
C3496_RS13270	PF04235	Protein of unknown function (DUF418)
C3496_RS13275	PF00350	Dynamin family
C3496_RS13285	PF00583	Acetyltransferase (GNAT) family
C3496_RS13290	PF10752	Protein of unknown function (DUF2533) 
C3496_RS13295	PF00581	Rhodanese-like domain
C3496_RS13320	PF03738	Glutathionylspermidine synthase preATP-grasp
C3496_RS13330	PF00690	Cation transporter/ATPase, N-terminus
C3496_RS13330	PF00689	Cation transporting ATPase, C-terminus
C3496_RS13335	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
C3496_RS13335	PF01367	5'-3' exonuclease, C-terminal SAM fold
C3496_RS13360	PF02397	Bacterial sugar transferase
C3496_RS13375	PF00535	Glycosyl transferase family 2
C3496_RS13380	PF13439	Glycosyltransferase Family 4
C3496_RS13380	PF00534	Glycosyl transferases group 1
C3496_RS13415	PF13456	Reverse transcriptase-like
C3496_RS13420	PF01263	Aldose 1-epimerase
C3496_RS13445	PF00313	'Cold-shock' DNA-binding domain
C3496_RS13450	PF08892	YqcI/YcgG family
C3496_RS13455	PF01810	LysE type translocator
C3496_RS13470	PF04341	Protein of unknown function, DUF485
C3496_RS13475	PF00474	Sodium:solute symporter family
C3496_RS13480	PF00202	Aminotransferase class-III
C3496_RS13490	PF00999	Sodium/hydrogen exchanger family
C3496_RS13495	PF00753	Metallo-beta-lactamase superfamily
C3496_RS13495	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
C3496_RS13495	PF17770	Ribonuclease J C-terminal domain
C3496_RS13500	PF06445	GyrI-like small molecule binding domain
C3496_RS13500	PF13411	MerR HTH family regulatory protein
C3496_RS13510	PF04239	Protein of unknown function (DUF421)
C3496_RS13515	PF02698	DUF218 domain
C3496_RS13525	PF00881	Nitroreductase family
C3496_RS13570	PF17209	Hfq protein
C3496_RS13580	PF01618	MotA/TolQ/ExbB proton channel family
C3496_RS13585	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
C3496_RS13585	PF00691	OmpA family
C3496_RS13590	PF00072	Response regulator receiver domain
C3496_RS13595	PF07194	P2 response regulator binding domain
C3496_RS13595	PF01627	Hpt domain
C3496_RS13595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS13595	PF02895	Signal transducing histidine kinase, homodimeric domain
C3496_RS13595	PF01584	CheW-like domain
C3496_RS13600	PF04509	CheC-like family
C3496_RS13600	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
C3496_RS13615	PF03705	CheR methyltransferase, all-alpha domain
C3496_RS13615	PF01739	CheR methyltransferase, SAM binding domain
C3496_RS13635	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3496_RS13635	PF00460	Flagella basal body rod protein
C3496_RS13640	PF00669	Bacterial flagellin N-terminal helical region
C3496_RS13640	PF00700	Bacterial flagellin C-terminal helical region
C3496_RS13660	PF00460	Flagella basal body rod protein
C3496_RS13665	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3496_RS13665	PF00460	Flagella basal body rod protein
C3496_RS13670	PF02049	Flagellar hook-basal body complex protein FliE
C3496_RS13675	PF01514	Secretory protein of YscJ/FliF family
C3496_RS13675	PF08345	Flagellar M-ring protein C-terminal
C3496_RS13680	PF01706	FliG C-terminal domain
C3496_RS13680	PF14841	FliG middle domain
C3496_RS13680	PF14842	FliG N-terminal domain
C3496_RS13690	PF18269	T3SS EscN ATPase C-terminal domain
C3496_RS13690	PF02874	ATP synthase alpha/beta family, beta-barrel domain
C3496_RS13690	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3496_RS13710	PF07559	Flagellar basal body protein FlaE
C3496_RS13710	PF00460	Flagella basal body rod protein
C3496_RS13710	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3496_RS13725	PF00072	Response regulator receiver domain
C3496_RS13725	PF01584	CheW-like domain
C3496_RS13730	PF12181	DNA binding domain of the motility gene repressor (MogR)
C3496_RS13735	PF00700	Bacterial flagellin C-terminal helical region
C3496_RS13735	PF00669	Bacterial flagellin N-terminal helical region
C3496_RS13740	PF00669	Bacterial flagellin N-terminal helical region
C3496_RS13740	PF00700	Bacterial flagellin C-terminal helical region
C3496_RS13745	PF01464	Transglycosylase SLT domain
C3496_RS13755	PF02154	Flagellar motor switch protein FliM
C3496_RS13755	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
C3496_RS13760	PF04509	CheC-like family
C3496_RS13760	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
C3496_RS13770	PF00813	FliP family
C3496_RS13775	PF01313	Bacterial export proteins, family 3
C3496_RS13785	PF01312	FlhB HrpN YscU SpaS Family
C3496_RS13790	PF00771	FHIPEP family
C3496_RS13795	PF00448	SRP54-type protein, GTPase domain
C3496_RS13800	PF00460	Flagella basal body rod protein
C3496_RS13800	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3496_RS13805	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3496_RS13805	PF02272	DHHA1 domain
C3496_RS13805	PF01411	tRNA synthetases class II (A)
C3496_RS13830	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS13830	PF17932	Tetracyclin repressor-like, C-terminal domain
C3496_RS13835	PF17329	Family of unknown function (DUF5367)
C3496_RS13850	PF03992	Antibiotic biosynthesis monooxygenase
C3496_RS13855	PF08141	Small acid-soluble spore protein H family
C3496_RS13875	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS13875	PF03466	LysR substrate binding domain
C3496_RS13880	PF08402	TOBE domain
C3496_RS13880	PF00005	ABC transporter
C3496_RS13890	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS13895	PF12706	Beta-lactamase superfamily domain
C3496_RS13895	PF00753	Metallo-beta-lactamase superfamily
C3496_RS13905	PF10787	Uncharacterised protein from bacillus cereus group
C3496_RS13925	PF00768	D-alanyl-D-alanine carboxypeptidase
C3496_RS13925	PF07943	Penicillin-binding protein 5, C-terminal domain
C3496_RS13935	PF00300	Histidine phosphatase superfamily (branch 1)
C3496_RS13945	PF00561	alpha/beta hydrolase fold
C3496_RS13955	PF01047	MarR family
C3496_RS13965	PF00733	Asparagine synthase
C3496_RS13965	PF13537	Glutamine amidotransferase domain
C3496_RS13985	PF01545	Cation efflux family
C3496_RS13985	PF16916	Dimerisation domain of Zinc Transporter
C3496_RS13995	PF07729	FCD domain
C3496_RS13995	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS14000	PF00892	EamA-like transporter family
C3496_RS14005	PF07683	Cobalamin synthesis protein cobW C-terminal domain
C3496_RS14005	PF02492	CobW/HypB/UreG, nucleotide-binding domain
C3496_RS14015	PF00535	Glycosyl transferase family 2
C3496_RS14020	PF03553	Na+/H+ antiporter family
C3496_RS14025	PF13411	MerR HTH family regulatory protein
C3496_RS14035	PF10415	Fumarase C C-terminus
C3496_RS14035	PF00206	Lyase
C3496_RS14050	PF01554	MatE
C3496_RS14055	PF03575	Peptidase family S51
C3496_RS14075	PF02683	Cytochrome C biogenesis protein transmembrane region
C3496_RS14080	PF00578	AhpC/TSA family
C3496_RS14095	PF00291	Pyridoxal-phosphate dependent enzyme
C3496_RS14100	PF04286	Protein of unknown function (DUF445)
C3496_RS14125	PF00196	Bacterial regulatory proteins, luxR family
C3496_RS14125	PF00072	Response regulator receiver domain
C3496_RS14130	PF13492	GAF domain
C3496_RS14130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS14130	PF07730	Histidine kinase
C3496_RS14130	PF13185	GAF domain
C3496_RS14135	PF00005	ABC transporter
C3496_RS14150	PF13091	PLD-like domain
C3496_RS14155	PF00696	Amino acid kinase family
C3496_RS14160	PF00375	Sodium:dicarboxylate symporter family
C3496_RS14165	PF00206	Lyase
C3496_RS14165	PF10415	Fumarase C C-terminus
C3496_RS14170	PF03949	Malic enzyme, NAD binding domain
C3496_RS14170	PF00390	Malic enzyme, N-terminal domain
C3496_RS14175	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS14180	PF08664	YcbB domain
C3496_RS14180	PF00072	Response regulator receiver domain
C3496_RS14185	PF00271	Helicase conserved C-terminal domain
C3496_RS14185	PF04434	SWIM zinc finger
C3496_RS14185	PF00176	SNF2 family N-terminal domain
C3496_RS14200	PF03590	Aspartate-ammonia ligase
C3496_RS14205	PF01381	Helix-turn-helix
C3496_RS14215	PF13840	ACT domain 
C3496_RS14215	PF00696	Amino acid kinase family
C3496_RS14225	PF13761	Domain of unknown function (DUF4166)
C3496_RS14230	PF14158	YndJ-like protein
C3496_RS14240	PF07690	Major Facilitator Superfamily
C3496_RS14255	PF02554	Carbon starvation protein CstA
C3496_RS14260	PF03976	Polyphosphate kinase 2 (PPK2)
C3496_RS14265	PF07690	Major Facilitator Superfamily
C3496_RS14270	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
C3496_RS14270	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
C3496_RS14275	PF13167	GTP-binding GTPase N-terminal
C3496_RS14275	PF01926	50S ribosome-binding GTPase
C3496_RS14275	PF16360	GTP-binding GTPase Middle Region
C3496_RS14280	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS14285	PF07690	Major Facilitator Superfamily
C3496_RS14290	PF00291	Pyridoxal-phosphate dependent enzyme
C3496_RS14305	PF01943	Polysaccharide biosynthesis protein
C3496_RS14305	PF14667	Polysaccharide biosynthesis C-terminal domain
C3496_RS14310	PF00209	Sodium:neurotransmitter symporter family
C3496_RS14315	PF01522	Polysaccharide deacetylase
C3496_RS14315	PF00457	Glycosyl hydrolases family 11
C3496_RS14315	PF03422	Carbohydrate binding module (family 6)
C3496_RS14325	PF04239	Protein of unknown function (DUF421)
C3496_RS14340	PF01625	Peptide methionine sulfoxide reductase
C3496_RS14350	PF01063	Amino-transferase class IV
C3496_RS14355	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3496_RS14355	PF00205	Thiamine pyrophosphate enzyme, central domain
C3496_RS14355	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3496_RS14365	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
C3496_RS14365	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
C3496_RS14370	PF00920	Dehydratase family
C3496_RS14375	PF00291	Pyridoxal-phosphate dependent enzyme
C3496_RS14375	PF00585	C-terminal regulatory domain of Threonine dehydratase
C3496_RS14385	PF09587	Bacterial capsule synthesis protein PGA_cap
C3496_RS14400	PF07690	Major Facilitator Superfamily
C3496_RS14405	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
C3496_RS14415	PF04397	LytTr DNA-binding domain
C3496_RS14415	PF00072	Response regulator receiver domain
C3496_RS14420	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
C3496_RS14420	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
C3496_RS14435	PF01979	Amidohydrolase family
C3496_RS14440	PF13026	Protein of unknown function (DUF3887)
C3496_RS14440	PF12146	Serine aminopeptidase, S33
C3496_RS14445	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS14465	PF04055	Radical SAM superfamily
C3496_RS14465	PF13186	Iron-sulfur cluster-binding domain
C3496_RS14470	PF13302	Acetyltransferase (GNAT) domain
C3496_RS14475	PF00072	Response regulator receiver domain
C3496_RS14475	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS14495	PF01566	Natural resistance-associated macrophage protein
C3496_RS14500	PF17773	UPF0176 acylphosphatase like domain
C3496_RS14500	PF00581	Rhodanese-like domain
C3496_RS14500	PF12368	Rhodanase C-terminal
C3496_RS14510	PF02558	Ketopantoate reductase PanE/ApbA
C3496_RS14510	PF08546	Ketopantoate reductase PanE/ApbA C terminal
C3496_RS14515	PF13520	Amino acid permease
C3496_RS14525	PF05791	Bacillus haemolytic enterotoxin (HBL)
C3496_RS14550	PF07728	AAA domain (dynein-related subfamily)
C3496_RS14560	PF05762	VWA domain containing CoxE-like protein
C3496_RS14585	PF04198	Putative sugar-binding domain
C3496_RS14590	PF01791	DeoC/LacD family aldolase
C3496_RS14595	PF01773	Na+ dependent nucleoside transporter N-terminus
C3496_RS14595	PF07662	Na+ dependent nucleoside transporter C-terminus
C3496_RS14600	PF00591	Glycosyl transferase family, a/b domain
C3496_RS14600	PF02885	Glycosyl transferase family, helical bundle domain
C3496_RS14600	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
C3496_RS14605	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3496_RS14610	PF07301	Protein of unknown function (DUF1453)
C3496_RS14615	PF05979	Bacterial protein of unknown function (DUF896)
C3496_RS14640	PF07732	Multicopper oxidase
C3496_RS14640	PF07731	Multicopper oxidase
C3496_RS14640	PF00394	Multicopper oxidase
C3496_RS14645	PF01551	Peptidase family M23
C3496_RS14655	PF01396	Topoisomerase DNA binding C4 zinc finger
C3496_RS14655	PF13342	C-terminal repeat of topoisomerase
C3496_RS14655	PF01131	DNA topoisomerase
C3496_RS14655	PF01751	Toprim domain
C3496_RS14665	PF00005	ABC transporter
C3496_RS14700	PF02525	Flavodoxin-like fold
C3496_RS14705	PF05525	Branched-chain amino acid transport protein
C3496_RS14715	PF04234	CopC domain
C3496_RS14715	PF05425	Copper resistance protein D
C3496_RS14715	PF13115	YtkA-like
C3496_RS14720	PF07987	Domain of unkown function (DUF1775)
C3496_RS14730	PF00892	EamA-like transporter family
C3496_RS14735	PF03466	LysR substrate binding domain
C3496_RS14735	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS14740	PF02082	Transcriptional regulator
C3496_RS14745	PF01323	DSBA-like thioredoxin domain
C3496_RS14750	PF00881	Nitroreductase family
C3496_RS14755	PF01425	Amidase
C3496_RS14760	PF01594	AI-2E family transporter
C3496_RS14770	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
C3496_RS14770	PF00056	lactate/malate dehydrogenase, NAD binding domain
C3496_RS14775	PF01593	Flavin containing amine oxidoreductase
C3496_RS14780	PF02492	CobW/HypB/UreG, nucleotide-binding domain
C3496_RS14780	PF07683	Cobalamin synthesis protein cobW C-terminal domain
C3496_RS14790	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS14790	PF00501	AMP-binding enzyme
C3496_RS14795	PF01575	MaoC like domain
C3496_RS14800	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
C3496_RS14800	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
C3496_RS14810	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3496_RS14810	PF00005	ABC transporter
C3496_RS14815	PF00005	ABC transporter
C3496_RS14820	PF02653	Branched-chain amino acid transport system / permease component
C3496_RS14830	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS14830	PF03466	LysR substrate binding domain
C3496_RS14840	PF14552	Tautomerase enzyme
C3496_RS14850	PF01047	MarR family
C3496_RS14860	PF01654	Cytochrome bd terminal oxidase subunit I
C3496_RS14865	PF02322	Cytochrome bd terminal oxidase subunit II
C3496_RS14870	PF00005	ABC transporter
C3496_RS14870	PF00664	ABC transporter transmembrane region
C3496_RS14875	PF00664	ABC transporter transmembrane region
C3496_RS14875	PF00005	ABC transporter
C3496_RS14890	PF02016	LD-carboxypeptidase N-terminal domain
C3496_RS14890	PF17676	LD-carboxypeptidase C-terminal domain
C3496_RS14895	PF07943	Penicillin-binding protein 5, C-terminal domain
C3496_RS14895	PF00768	D-alanyl-D-alanine carboxypeptidase
C3496_RS14905	PF01476	LysM domain
C3496_RS14905	PF00877	NlpC/P60 family
C3496_RS14915	PF00664	ABC transporter transmembrane region
C3496_RS14915	PF00005	ABC transporter
C3496_RS14920	PF00072	Response regulator receiver domain
C3496_RS14920	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS14925	PF00989	PAS fold
C3496_RS14925	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS14925	PF16736	Single Cache-like 
C3496_RS14925	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS14935	PF00106	short chain dehydrogenase
C3496_RS14940	PF01596	O-methyltransferase
C3496_RS14945	PF04439	Streptomycin adenylyltransferase
C3496_RS14950	PF01522	Polysaccharide deacetylase
C3496_RS14970	PF00742	Homoserine dehydrogenase
C3496_RS14970	PF03447	Homoserine dehydrogenase, NAD binding domain
C3496_RS14970	PF01842	ACT domain
C3496_RS14975	PF00291	Pyridoxal-phosphate dependent enzyme
C3496_RS14980	PF00288	GHMP kinases N terminal domain
C3496_RS14980	PF08544	GHMP kinases C terminal 
C3496_RS14995	PF03816	Cell envelope-related transcriptional attenuator domain
C3496_RS15005	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS15005	PF00072	Response regulator receiver domain
C3496_RS15010	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS15010	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS15010	PF00989	PAS fold
C3496_RS15010	PF16736	Single Cache-like 
C3496_RS15015	PF01522	Polysaccharide deacetylase
C3496_RS15025	PF02308	MgtC family
C3496_RS15030	PF00583	Acetyltransferase (GNAT) family
C3496_RS15035	PF04183	IucA / IucC family
C3496_RS15035	PF06276	Ferric iron reductase FhuF-like transporter
C3496_RS15040	PF06276	Ferric iron reductase FhuF-like transporter
C3496_RS15040	PF04183	IucA / IucC family
C3496_RS15045	PF00501	AMP-binding enzyme
C3496_RS15045	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS15060	PF01261	Xylose isomerase-like TIM barrel
C3496_RS15065	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3496_RS15070	PF07690	Major Facilitator Superfamily
C3496_RS15075	PF01810	LysE type translocator
C3496_RS15080	PF00155	Aminotransferase class I and II
C3496_RS15080	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS15090	PF01734	Patatin-like phospholipase
C3496_RS15115	PF13344	Haloacid dehalogenase-like hydrolase
C3496_RS15115	PF00293	NUDIX domain
C3496_RS15120	PF02540	NAD synthase
C3496_RS15125	PF02687	FtsX-like permease family
C3496_RS15130	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
C3496_RS15130	PF18277	AbrB C-terminal domain
C3496_RS15135	PF00082	Subtilase family
C3496_RS15140	PF01022	Bacterial regulatory protein, arsR family
C3496_RS15145	PF00248	Aldo/keto reductase family
C3496_RS15150	PF07690	Major Facilitator Superfamily
C3496_RS15170	PF03193	RsgA GTPase
C3496_RS15175	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS15175	PF00672	HAMP domain
C3496_RS15175	PF02743	Cache domain
C3496_RS15195	PF00210	Ferritin-like domain
C3496_RS15210	PF00296	Luciferase-like monooxygenase
C3496_RS15220	PF01593	Flavin containing amine oxidoreductase
C3496_RS15230	PF00248	Aldo/keto reductase family
C3496_RS15240	PF02492	CobW/HypB/UreG, nucleotide-binding domain
C3496_RS15240	PF07683	Cobalamin synthesis protein cobW C-terminal domain
C3496_RS15245	PF00583	Acetyltransferase (GNAT) family
C3496_RS15250	PF01297	Zinc-uptake complex component A periplasmic
C3496_RS15250	PF09223	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
C3496_RS15260	PF13460	NAD(P)H-binding 
C3496_RS15265	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
C3496_RS15270	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
C3496_RS15270	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
C3496_RS15280	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS15285	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS15295	PF00300	Histidine phosphatase superfamily (branch 1)
C3496_RS15305	PF08757	CotH kinase protein
C3496_RS15310	PF00293	NUDIX domain
C3496_RS15315	PF09335	SNARE associated Golgi protein
C3496_RS15320	PF14667	Polysaccharide biosynthesis C-terminal domain
C3496_RS15320	PF01943	Polysaccharide biosynthesis protein
C3496_RS15330	PF03773	Predicted permease
C3496_RS15335	PF09323	Domain of unknown function (DUF1980)
C3496_RS15340	PF03061	Thioesterase superfamily
C3496_RS15350	PF13396	Phospholipase_D-nuclease N-terminal
C3496_RS15350	PF13091	PLD-like domain
C3496_RS15365	PF13460	NAD(P)H-binding 
C3496_RS15370	PF04306	Protein of unknown function (DUF456)
C3496_RS15375	PF01595	Cyclin M transmembrane N-terminal domain
C3496_RS15375	PF03471	Transporter associated domain
C3496_RS15375	PF00571	CBS domain
C3496_RS15390	PF05525	Branched-chain amino acid transport protein
C3496_RS15395	PF01588	Putative tRNA binding domain
C3496_RS15415	PF07454	Stage II sporulation protein P (SpoIIP)
C3496_RS15425	PF02557	D-alanyl-D-alanine carboxypeptidase
C3496_RS15435	PF01425	Amidase
C3496_RS15440	PF07690	Major Facilitator Superfamily
C3496_RS15450	PF01145	SPFH domain / Band 7 family
C3496_RS15455	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
C3496_RS15455	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
C3496_RS15465	PF06574	FAD synthetase
C3496_RS15470	PF06052	3-hydroxyanthranilic acid dioxygenase
C3496_RS15480	PF01042	Endoribonuclease L-PSP
C3496_RS15485	PF00171	Aldehyde dehydrogenase family
C3496_RS15490	PF01557	Fumarylacetoacetate (FAA) hydrolase family
C3496_RS15495	PF01118	Semialdehyde dehydrogenase, NAD binding domain
C3496_RS15495	PF09290	Prokaryotic acetaldehyde dehydrogenase, dimerisation
C3496_RS15500	PF07836	DmpG-like communication domain
C3496_RS15500	PF00682	HMGL-like
C3496_RS15510	PF01361	Tautomerase enzyme
C3496_RS15515	PF00300	Histidine phosphatase superfamily (branch 1)
C3496_RS15530	PF01168	Alanine racemase, N-terminal domain
C3496_RS15530	PF00842	Alanine racemase, C-terminal domain
C3496_RS15535	PF01209	ubiE/COQ5 methyltransferase family
C3496_RS15550	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
C3496_RS15555	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3496_RS15555	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS15560	PF00155	Aminotransferase class I and II
C3496_RS15560	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS15590	PF00583	Acetyltransferase (GNAT) family
C3496_RS15670	PF00589	Phage integrase family
C3496_RS15770	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
C3496_RS15795	PF01209	ubiE/COQ5 methyltransferase family
C3496_RS15800	PF01268	Formate--tetrahydrofolate ligase
C3496_RS15810	PF00270	DEAD/DEAH box helicase
C3496_RS15810	PF00271	Helicase conserved C-terminal domain
C3496_RS15815	PF01261	Xylose isomerase-like TIM barrel
C3496_RS15820	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS15830	PF00107	Zinc-binding dehydrogenase
C3496_RS15830	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS15835	PF08281	Sigma-70, region 4
C3496_RS15835	PF04542	Sigma-70 region 2 
C3496_RS15855	PF00258	Flavodoxin
C3496_RS15855	PF01613	Flavin reductase like domain
C3496_RS15875	PF00255	Glutathione peroxidase
C3496_RS15880	PF01841	Transglutaminase-like superfamily
C3496_RS15880	PF13559	Domain of unknown function (DUF4129)
C3496_RS15880	PF11992	Domain of unknown function (DUF3488)
C3496_RS15885	PF01882	Protein of unknown function DUF58
C3496_RS15890	PF07726	ATPase family associated with various cellular activities (AAA)
C3496_RS15890	PF17863	AAA lid domain
C3496_RS15905	PF14710	Respiratory nitrate reductase alpha N-terminal
C3496_RS15905	PF00384	Molybdopterin oxidoreductase
C3496_RS15905	PF01568	Molydopterin dinucleotide binding domain
C3496_RS15910	PF14711	Respiratory nitrate reductase beta C-terminal
C3496_RS15910	PF13247	4Fe-4S dicluster domain
C3496_RS15915	PF02613	Nitrate reductase delta subunit
C3496_RS15920	PF02665	Nitrate reductase gamma subunit
C3496_RS15925	PF00325	Bacterial regulatory proteins, crp family
C3496_RS15925	PF00027	Cyclic nucleotide-binding domain
C3496_RS15930	PF06463	Molybdenum Cofactor Synthesis C
C3496_RS15930	PF04055	Radical SAM superfamily
C3496_RS15935	PF00899	ThiF family
C3496_RS15940	PF03454	MoeA C-terminal region (domain IV)
C3496_RS15940	PF00994	Probable molybdopterin binding domain
C3496_RS15940	PF03453	MoeA N-terminal region (domain I and II)
C3496_RS15945	PF02391	MoaE protein
C3496_RS15955	PF07690	Major Facilitator Superfamily
C3496_RS15975	PF01903	CbiX
C3496_RS15980	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
C3496_RS15985	PF00355	Rieske [2Fe-2S] domain
C3496_RS15990	PF04324	BFD-like [2Fe-2S] binding domain
C3496_RS15990	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
C3496_RS15990	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
C3496_RS15990	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS15990	PF18267	Rubredoxin NAD+ reductase C-terminal domain
C3496_RS15995	PF01814	Hemerythrin HHE cation binding domain
C3496_RS15995	PF04405	Domain of Unknown function (DUF542)  
C3496_RS16030	PF04232	Stage V sporulation protein S (SpoVS)
C3496_RS16070	PF01966	HD domain
C3496_RS16075	PF00005	ABC transporter
C3496_RS16075	PF12848	ABC transporter
C3496_RS16075	PF16326	ABC transporter C-terminal domain
C3496_RS16090	PF00436	Single-strand binding protein family
C3496_RS16095	PF08712	Scaffold protein Nfu/NifU N terminal
C3496_RS16095	PF13769	Virulence factor
C3496_RS16105	PF06491	Disulphide isomerase
C3496_RS16110	PF04445	Putative SAM-dependent methyltransferase
C3496_RS16115	PF03485	Arginyl tRNA synthetase N terminal domain
C3496_RS16115	PF05746	DALR anticodon binding domain
C3496_RS16115	PF00750	tRNA synthetases class I (R)
C3496_RS16130	PF00133	tRNA synthetases class I (I, L, M and V)
C3496_RS16130	PF08264	Anticodon-binding domain of tRNA
C3496_RS16155	PF01225	Mur ligase family, catalytic domain
C3496_RS16155	PF08245	Mur ligase middle domain
C3496_RS16155	PF02875	Mur ligase family, glutamate ligase domain
C3496_RS16160	PF01336	OB-fold nucleic acid binding domain
C3496_RS16160	PF00152	tRNA synthetases class II (D, K and N) 
C3496_RS16180	PF12538	DNA transporter 
C3496_RS16180	PF01580	FtsK/SpoIIIE family
C3496_RS16225	PF02371	Transposase IS116/IS110/IS902 family
C3496_RS16225	PF01548	Transposase
C3496_RS16295	PF00209	Sodium:neurotransmitter symporter family
C3496_RS16310	PF10997	Alternate to MurJ
C3496_RS16315	PF13419	Haloacid dehalogenase-like hydrolase
C3496_RS16325	PF00465	Iron-containing alcohol dehydrogenase 
C3496_RS16330	PF01177	Asp/Glu/Hydantoin racemase
C3496_RS16335	PF01980	tRNA-methyltransferase O
C3496_RS16340	PF00583	Acetyltransferase (GNAT) family
C3496_RS16355	PF00005	ABC transporter
C3496_RS16360	PF05975	Bacterial ABC transporter protein EcsB
C3496_RS16365	PF14005	YpjP-like protein
C3496_RS16370	PF13419	Haloacid dehalogenase-like hydrolase
C3496_RS16390	PF07930	D-aminopeptidase, domain B
C3496_RS16390	PF00144	Beta-lactamase
C3496_RS16395	PF00303	Thymidylate synthase
C3496_RS16400	PF00186	Dihydrofolate reductase
C3496_RS16405	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS16405	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS16405	PF05223	NTF2-like N-terminal transpeptidase domain
C3496_RS16410	PF02525	Flavodoxin-like fold
C3496_RS16415	PF01553	Acyltransferase
C3496_RS16420	PF03006	Haemolysin-III related
C3496_RS16425	PF02416	mttA/Hcf106 family
C3496_RS16430	PF00902	Sec-independent protein translocase protein (TatC)
C3496_RS16440	PF02645	Uncharacterised protein, DegV family COG1307
C3496_RS16445	PF12706	Beta-lactamase superfamily domain
C3496_RS16450	PF02630	SCO1/SenC
C3496_RS16455	PF00011	Hsp20/alpha crystallin family
C3496_RS16460	PF13537	Glutamine amidotransferase domain
C3496_RS16460	PF00733	Asparagine synthase
C3496_RS16480	PF01497	Periplasmic binding protein
C3496_RS16485	PF01063	Amino-transferase class IV
C3496_RS16490	PF00881	Nitroreductase family
C3496_RS16500	PF00857	Isochorismatase family
C3496_RS16505	PF00293	NUDIX domain
C3496_RS16510	PF00011	Hsp20/alpha crystallin family
C3496_RS16515	PF00924	Mechanosensitive ion channel
C3496_RS16520	PF13185	GAF domain
C3496_RS16520	PF07730	Histidine kinase
C3496_RS16525	PF00196	Bacterial regulatory proteins, luxR family
C3496_RS16525	PF00072	Response regulator receiver domain
C3496_RS16530	PF01380	SIS domain
C3496_RS16530	PF01418	Helix-turn-helix domain, rpiR family
C3496_RS16535	PF00107	Zinc-binding dehydrogenase
C3496_RS16535	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS16550	PF00144	Beta-lactamase
C3496_RS16575	PF03358	NADPH-dependent FMN reductase
C3496_RS16590	PF00571	CBS domain
C3496_RS16590	PF00005	ABC transporter
C3496_RS16595	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS16600	PF13520	Amino acid permease
C3496_RS16630	PF01595	Cyclin M transmembrane N-terminal domain
C3496_RS16630	PF00571	CBS domain
C3496_RS16630	PF03471	Transporter associated domain
C3496_RS16635	PF00171	Aldehyde dehydrogenase family
C3496_RS16640	PF07997	Protein of unknown function (DUF1694)
C3496_RS16645	PF09385	Histidine kinase N terminal
C3496_RS16655	PF00202	Aminotransferase class-III
C3496_RS16660	PF01144	Coenzyme A transferase
C3496_RS16665	PF01144	Coenzyme A transferase
C3496_RS16670	PF07687	Peptidase dimerisation domain
C3496_RS16670	PF01546	Peptidase family M20/M25/M40
C3496_RS16675	PF00583	Acetyltransferase (GNAT) family
C3496_RS16680	PF00158	Sigma-54 interaction domain
C3496_RS16680	PF02954	Bacterial regulatory protein, Fis family
C3496_RS16680	PF13426	PAS domain
C3496_RS16685	PF12544	Lysine-2,3-aminomutase 
C3496_RS16690	PF14122	YokU-like protein, putative antitoxin
C3496_RS16695	PF06855	YozE SAM-like fold
C3496_RS16710	PF14162	YozD-like protein
C3496_RS16720	PF00069	Protein kinase domain
C3496_RS16720	PF08239	Bacterial SH3 domain
C3496_RS16725	PF07070	SpoOM protein
C3496_RS16730	PF01569	PAP2 superfamily
C3496_RS16735	PF16916	Dimerisation domain of Zinc Transporter
C3496_RS16735	PF01545	Cation efflux family
C3496_RS16740	PF00085	Thioredoxin
C3496_RS16830	PF10676	Spore germination protein gerPA/gerPF
C3496_RS16850	PF00912	Transglycosylase
C3496_RS16850	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS16860	PF07690	Major Facilitator Superfamily
C3496_RS16865	PF01521	Iron-sulphur cluster biosynthesis
C3496_RS16870	PF00285	Citrate synthase, C-terminal domain
C3496_RS16875	PF03972	MmgE/PrpD family
C3496_RS16885	PF02770	Acyl-CoA dehydrogenase, middle domain
C3496_RS16885	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3496_RS16885	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3496_RS16890	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
C3496_RS16890	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3496_RS16895	PF00171	Aldehyde dehydrogenase family
C3496_RS16900	PF01810	LysE type translocator
C3496_RS16905	PF00378	Enoyl-CoA hydratase/isomerase
C3496_RS16915	PF10763	Protein of unknown function (DUF2584)
C3496_RS16920	PF00149	Calcineurin-like phosphoesterase
C3496_RS16920	PF12320	Type 5 capsule protein repressor C-terminal domain
C3496_RS16925	PF13476	AAA domain
C3496_RS16930	PF01022	Bacterial regulatory protein, arsR family
C3496_RS16945	PF07690	Major Facilitator Superfamily
C3496_RS16950	PF00106	short chain dehydrogenase
C3496_RS16955	PF00425	chorismate binding enzyme
C3496_RS16960	PF00501	AMP-binding enzyme
C3496_RS16960	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS16965	PF00550	Phosphopantetheine attachment site
C3496_RS16965	PF00857	Isochorismatase family
C3496_RS16970	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS16970	PF00668	Condensation domain
C3496_RS16970	PF00550	Phosphopantetheine attachment site
C3496_RS16970	PF00975	Thioesterase domain
C3496_RS16970	PF00501	AMP-binding enzyme
C3496_RS16975	PF03621	MbtH-like protein
C3496_RS16980	PF07690	Major Facilitator Superfamily
C3496_RS16995	PF00216	Bacterial DNA-binding protein
C3496_RS17005	PF05163	DinB family
C3496_RS17010	PF00082	Subtilase family
C3496_RS17015	PF01235	Sodium:alanine symporter family
C3496_RS17030	PF16291	Domain of unknown function (DUF4937
C3496_RS17035	PF01479	S4 domain
C3496_RS17035	PF00849	RNA pseudouridylate synthase
C3496_RS17040	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3496_RS17040	PF03129	Anticodon binding domain
C3496_RS17040	PF02824	TGS domain
C3496_RS17040	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3496_RS17045	PF00005	ABC transporter
C3496_RS17055	PF12146	Serine aminopeptidase, S33
C3496_RS17060	PF07690	Major Facilitator Superfamily
C3496_RS17075	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3496_RS17075	PF00205	Thiamine pyrophosphate enzyme, central domain
C3496_RS17075	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3496_RS17125	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3496_RS17125	PF02403	Seryl-tRNA synthetase N-terminal domain
C3496_RS17130	PF03176	MMPL family
C3496_RS17140	PF00302	Chloramphenicol acetyltransferase
C3496_RS17155	PF00583	Acetyltransferase (GNAT) family
C3496_RS17185	PF01593	Flavin containing amine oxidoreductase
C3496_RS17200	PF13302	Acetyltransferase (GNAT) domain
C3496_RS17210	PF00313	'Cold-shock' DNA-binding domain
C3496_RS17240	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS17240	PF03466	LysR substrate binding domain
C3496_RS17245	PF01118	Semialdehyde dehydrogenase, NAD binding domain
C3496_RS17245	PF02774	Semialdehyde dehydrogenase, dimerisation domain
C3496_RS17260	PF03466	LysR substrate binding domain
C3496_RS17260	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS17265	PF03475	3-alpha domain
C3496_RS17265	PF03473	MOSC domain
C3496_RS17280	PF00664	ABC transporter transmembrane region
C3496_RS17280	PF00005	ABC transporter
C3496_RS17285	PF00664	ABC transporter transmembrane region
C3496_RS17285	PF00005	ABC transporter
C3496_RS17300	PF01810	LysE type translocator
C3496_RS17305	PF07883	Cupin domain
C3496_RS17305	PF01381	Helix-turn-helix
C3496_RS17335	PF02824	TGS domain
C3496_RS17335	PF04607	Region found in RelA / SpoT proteins
C3496_RS17335	PF13291	ACT domain
C3496_RS17345	PF00890	FAD binding domain
C3496_RS17350	PF08281	Sigma-70, region 4
C3496_RS17350	PF04542	Sigma-70 region 2 
C3496_RS17350	PF12680	SnoaL-like domain
C3496_RS17375	PF02638	Glycosyl hydrolase-like 10
C3496_RS17385	PF02378	Phosphotransferase system, EIIC 
C3496_RS17395	PF03702	Anhydro-N-acetylmuramic acid kinase
C3496_RS17400	PF01869	BadF/BadG/BcrA/BcrD ATPase family
C3496_RS17405	PF02660	Glycerol-3-phosphate acyltransferase
C3496_RS17410	PF00266	Aminotransferase class-V
C3496_RS17415	PF00291	Pyridoxal-phosphate dependent enzyme
C3496_RS17445	PF00753	Metallo-beta-lactamase superfamily
C3496_RS17445	PF16123	Hydroxyacylglutathione hydrolase C-terminus
C3496_RS17460	PF00271	Helicase conserved C-terminal domain
C3496_RS17460	PF00270	DEAD/DEAH box helicase
C3496_RS17475	PF17932	Tetracyclin repressor-like, C-terminal domain
C3496_RS17475	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS17490	PF02687	FtsX-like permease family
C3496_RS17490	PF12704	MacB-like periplasmic core domain
C3496_RS17490	PF00005	ABC transporter
C3496_RS17495	PF03848	Tellurite resistance protein TehB
C3496_RS17495	PF09313	Domain of unknown function (DUF1971)
C3496_RS17505	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3496_RS17505	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3496_RS17505	PF00205	Thiamine pyrophosphate enzyme, central domain
C3496_RS17510	PF12802	MarR family
C3496_RS17515	PF00300	Histidine phosphatase superfamily (branch 1)
C3496_RS17520	PF14171	Toxin SpoIISA, type II toxin-antitoxin system
C3496_RS17535	PF07687	Peptidase dimerisation domain
C3496_RS17535	PF01546	Peptidase family M20/M25/M40
C3496_RS17545	PF00132	Bacterial transferase hexapeptide (six repeats)
C3496_RS17555	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS17555	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS17555	PF05223	NTF2-like N-terminal transpeptidase domain
C3496_RS17560	PF04542	Sigma-70 region 2 
C3496_RS17560	PF08281	Sigma-70, region 4
C3496_RS17570	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS17570	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS17575	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS17575	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS17590	PF00356	Bacterial regulatory proteins, lacI family
C3496_RS17595	PF07690	Major Facilitator Superfamily
C3496_RS17600	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
C3496_RS17600	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
C3496_RS17605	PF00294	pfkB family carbohydrate kinase
C3496_RS17610	PF00171	Aldehyde dehydrogenase family
C3496_RS17615	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3496_RS17615	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3496_RS17615	PF00205	Thiamine pyrophosphate enzyme, central domain
C3496_RS17620	PF01261	Xylose isomerase-like TIM barrel
C3496_RS17625	PF01116	Fructose-bisphosphate aldolase class-II
C3496_RS17630	PF04962	KduI/IolB family
C3496_RS17645	PF07486	Cell Wall Hydrolase
C3496_RS17650	PF01757	Acyltransferase family
C3496_RS17665	PF16123	Hydroxyacylglutathione hydrolase C-terminus
C3496_RS17665	PF00753	Metallo-beta-lactamase superfamily
C3496_RS17700	PF00563	EAL domain
C3496_RS17700	PF03707	Bacterial signalling protein N terminal repeat
C3496_RS17700	PF00990	Diguanylate cyclase, GGDEF domain
C3496_RS17710	PF00005	ABC transporter
C3496_RS17725	PF13302	Acetyltransferase (GNAT) domain
C3496_RS17735	PF00672	HAMP domain
C3496_RS17735	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS17735	PF02743	Cache domain
C3496_RS17750	PF11799	impB/mucB/samB family C-terminal domain
C3496_RS17750	PF11798	IMS family HHH motif
C3496_RS17750	PF00817	impB/mucB/samB family
C3496_RS17775	PF13700	Domain of unknown function (DUF4158)
C3496_RS17775	PF01526	Tn3 transposase DDE domain
C3496_RS17780	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS17780	PF00072	Response regulator receiver domain
C3496_RS17785	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS17785	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS17800	PF03009	Glycerophosphoryl diester phosphodiesterase family
C3496_RS17805	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS17810	PF00753	Metallo-beta-lactamase superfamily
C3496_RS17825	PF00005	ABC transporter
C3496_RS17835	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS17835	PF08359	YsiA-like protein, C-terminal region
C3496_RS17850	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3496_RS17850	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3496_RS17850	PF02770	Acyl-CoA dehydrogenase, middle domain
C3496_RS17855	PF00289	Biotin carboxylase, N-terminal domain
C3496_RS17855	PF02785	Biotin carboxylase C-terminal domain
C3496_RS17855	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3496_RS17860	PF00364	Biotin-requiring enzyme
C3496_RS17865	PF00682	HMGL-like
C3496_RS17870	PF00378	Enoyl-CoA hydratase/isomerase
C3496_RS17875	PF01039	Carboxyl transferase domain
C3496_RS17880	PF16177	Acetyl-coenzyme A synthetase N-terminus
C3496_RS17880	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS17880	PF00501	AMP-binding enzyme
C3496_RS17890	PF00583	Acetyltransferase (GNAT) family
C3496_RS17895	PF00485	Phosphoribulokinase / Uridine kinase family
C3496_RS17905	PF05163	DinB family
C3496_RS17910	PF00768	D-alanyl-D-alanine carboxypeptidase
C3496_RS17910	PF07943	Penicillin-binding protein 5, C-terminal domain
C3496_RS17915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS17915	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS17920	PF00072	Response regulator receiver domain
C3496_RS17920	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS17925	PF01966	HD domain
C3496_RS17935	PF01048	Phosphorylase superfamily
C3496_RS17940	PF13460	NAD(P)H-binding 
C3496_RS17955	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3496_RS17955	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3496_RS17955	PF01447	Thermolysin metallopeptidase, catalytic domain
C3496_RS17955	PF03413	Peptidase propeptide and YPEB domain
C3496_RS17960	PF12833	Helix-turn-helix domain
C3496_RS17960	PF17853	GGDEF-like domain
C3496_RS18000	PF00144	Beta-lactamase
C3496_RS18005	PF09278	MerR, DNA binding
C3496_RS18005	PF00376	MerR family regulatory protein
C3496_RS18010	PF07690	Major Facilitator Superfamily
C3496_RS18020	PF13847	Methyltransferase domain
C3496_RS18035	PF01636	Phosphotransferase enzyme family
C3496_RS18040	PF12833	Helix-turn-helix domain
C3496_RS18055	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS18055	PF00155	Aminotransferase class I and II
C3496_RS18070	PF00107	Zinc-binding dehydrogenase
C3496_RS18070	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS18075	PF04239	Protein of unknown function (DUF421)
C3496_RS18080	PF08241	Methyltransferase domain
C3496_RS18090	PF08450	SMP-30/Gluconolactonase/LRE-like region
C3496_RS18100	PF01921	tRNA synthetases class I (K)
C3496_RS18105	PF07486	Cell Wall Hydrolase
C3496_RS18115	PF00072	Response regulator receiver domain
C3496_RS18115	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS18120	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS18125	PF00005	ABC transporter
C3496_RS18125	PF12848	ABC transporter
C3496_RS18140	PF00005	ABC transporter
C3496_RS18145	PF02687	FtsX-like permease family
C3496_RS18165	PF00742	Homoserine dehydrogenase
C3496_RS18165	PF01842	ACT domain
C3496_RS18165	PF03447	Homoserine dehydrogenase, NAD binding domain
C3496_RS18170	PF00155	Aminotransferase class I and II
C3496_RS18170	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS18175	PF07478	D-ala D-ala ligase C-terminus
C3496_RS18175	PF01820	D-ala D-ala ligase N-terminus
C3496_RS18180	PF03070	TENA/THI-4/PQQC family
C3496_RS18255	PF00067	Cytochrome P450
C3496_RS18265	PF00132	Bacterial transferase hexapeptide (six repeats)
C3496_RS18270	PF07561	Domain of Unknown Function (DUF1540)
C3496_RS18280	PF00067	Cytochrome P450
C3496_RS18295	PF00989	PAS fold
C3496_RS18295	PF13426	PAS domain
C3496_RS18295	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS18295	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS18295	PF13188	PAS domain
C3496_RS18300	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS18300	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS18305	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
C3496_RS18310	PF01177	Asp/Glu/Hydantoin racemase
C3496_RS18315	PF07155	ECF-type riboflavin transporter, S component
C3496_RS18320	PF12558	ATP-binding cassette cobalt transporter
C3496_RS18320	PF00005	ABC transporter
C3496_RS18335	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS18335	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS18345	PF04229	GrpB protein
C3496_RS18350	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS18350	PF00107	Zinc-binding dehydrogenase
C3496_RS18355	PF01569	PAP2 superfamily
C3496_RS18360	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS18360	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS18360	PF03793	PASTA domain
C3496_RS18365	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS18365	PF08361	MAATS-type transcriptional repressor, C-terminal region
C3496_RS18420	PF01965	DJ-1/PfpI family
C3496_RS18430	PF00144	Beta-lactamase
C3496_RS18445	PF13411	MerR HTH family regulatory protein
C3496_RS18445	PF07739	TipAS antibiotic-recognition domain
C3496_RS18450	PF07690	Major Facilitator Superfamily
C3496_RS18465	PF03009	Glycerophosphoryl diester phosphodiesterase family
C3496_RS18485	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS18485	PF00155	Aminotransferase class I and II
C3496_RS18490	PF00892	EamA-like transporter family
C3496_RS18500	PF00293	NUDIX domain
C3496_RS18510	PF00144	Beta-lactamase
C3496_RS18520	PF07690	Major Facilitator Superfamily
C3496_RS18535	PF00293	NUDIX domain
C3496_RS18535	PF09297	NADH pyrophosphatase zinc ribbon domain
C3496_RS18540	PF00712	DNA polymerase III beta subunit, N-terminal domain
C3496_RS18540	PF02768	DNA polymerase III beta subunit, C-terminal domain
C3496_RS18540	PF02767	DNA polymerase III beta subunit, central domain
C3496_RS18545	PF00293	NUDIX domain
C3496_RS18560	PF12706	Beta-lactamase superfamily domain
C3496_RS18580	PF09234	Domain of unknown function (DUF1963)
C3496_RS18600	PF01734	Patatin-like phospholipase
C3496_RS18605	PF08000	Bacterial PH domain
C3496_RS18615	PF12867	DinB superfamily
C3496_RS18630	PF02673	Bacitracin resistance protein BacA
C3496_RS18640	PF01541	GIY-YIG catalytic domain
C3496_RS18680	PF01266	FAD dependent oxidoreductase
C3496_RS18705	PF13419	Haloacid dehalogenase-like hydrolase
C3496_RS18720	PF01569	PAP2 superfamily
C3496_RS18725	PF03714	Bacterial pullanase-associated domain
C3496_RS18725	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
C3496_RS18725	PF00128	Alpha amylase, catalytic domain
C3496_RS18730	PF01447	Thermolysin metallopeptidase, catalytic domain
C3496_RS18730	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3496_RS18730	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3496_RS18730	PF03413	Peptidase propeptide and YPEB domain
C3496_RS18750	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS18755	PF00344	SecY translocase
C3496_RS18760	PF08299	Bacterial dnaA protein helix-turn-helix
C3496_RS18760	PF00308	Bacterial dnaA  protein
C3496_RS18760	PF11638	DnaA N-terminal domain
C3496_RS18765	PF00892	EamA-like transporter family
C3496_RS18770	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS18770	PF00155	Aminotransferase class I and II
C3496_RS18775	PF00561	alpha/beta hydrolase fold
C3496_RS18805	PF06081	Aromatic acid exporter family member 1
C3496_RS18820	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
C3496_RS18825	PF03413	Peptidase propeptide and YPEB domain
C3496_RS18825	PF14620	YpeB sporulation
C3496_RS18830	PF07486	Cell Wall Hydrolase
C3496_RS18830	PF01471	Putative peptidoglycan binding domain
C3496_RS18845	PF03301	Tryptophan 2,3-dioxygenase
C3496_RS18850	PF04199	Putative cyclase
C3496_RS18855	PF00266	Aminotransferase class-V
C3496_RS18860	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS18860	PF08359	YsiA-like protein, C-terminal region
C3496_RS18865	PF13344	Haloacid dehalogenase-like hydrolase
C3496_RS18865	PF00293	NUDIX domain
C3496_RS18890	PF00158	Sigma-54 interaction domain
C3496_RS18890	PF01590	GAF domain
C3496_RS18890	PF02954	Bacterial regulatory protein, Fis family
C3496_RS18900	PF13302	Acetyltransferase (GNAT) domain
C3496_RS18905	PF08220	DeoR-like helix-turn-helix domain
C3496_RS18905	PF00455	DeoR C terminal sensor domain
C3496_RS18925	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3496_RS18925	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS18930	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3496_RS18930	PF02817	e3 binding domain
C3496_RS18930	PF00364	Biotin-requiring enzyme
C3496_RS18935	PF02780	Transketolase, C-terminal domain
C3496_RS18935	PF02779	Transketolase, pyrimidine binding domain
C3496_RS18940	PF00676	Dehydrogenase E1 component
C3496_RS18950	PF00106	short chain dehydrogenase
C3496_RS18955	PF13673	Acetyltransferase (GNAT) domain
C3496_RS18955	PF04229	GrpB protein
C3496_RS18990	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS18995	PF00571	CBS domain
C3496_RS18995	PF00005	ABC transporter
C3496_RS19000	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
C3496_RS19005	PF00574	Clp protease
C3496_RS19020	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
C3496_RS19025	PF13673	Acetyltransferase (GNAT) domain
C3496_RS19030	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
C3496_RS19030	PF18416	N-acetylglucosamine binding protein domain 2
C3496_RS19035	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
C3496_RS19040	PF03781	Sulfatase-modifying factor enzyme 1
C3496_RS19050	PF10990	Protein of unknown function (DUF2809)
C3496_RS19055	PF08241	Methyltransferase domain
C3496_RS19090	PF13538	UvrD-like helicase C-terminal domain
C3496_RS19105	PF06094	Gamma-glutamyl cyclotransferase, AIG2-like
C3496_RS19110	PF16124	RecQ zinc-binding
C3496_RS19110	PF00570	HRDC domain
C3496_RS19110	PF00271	Helicase conserved C-terminal domain
C3496_RS19110	PF00270	DEAD/DEAH box helicase
C3496_RS19110	PF09382	RQC domain
C3496_RS19150	PF02833	DHHA2 domain
C3496_RS19150	PF01368	DHH family
C3496_RS19155	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
C3496_RS19155	PF18416	N-acetylglucosamine binding protein domain 2
C3496_RS19170	PF02627	Carboxymuconolactone decarboxylase family
C3496_RS19175	PF01235	Sodium:alanine symporter family
C3496_RS19180	PF00171	Aldehyde dehydrogenase family
C3496_RS19185	PF00701	Dihydrodipicolinate synthetase family
C3496_RS19190	PF05544	Proline racemase
C3496_RS19195	PF05544	Proline racemase
C3496_RS19200	PF01266	FAD dependent oxidoreductase
C3496_RS19205	PF00158	Sigma-54 interaction domain
C3496_RS19205	PF02954	Bacterial regulatory protein, Fis family
C3496_RS19205	PF13188	PAS domain
C3496_RS19210	PF04324	BFD-like [2Fe-2S] binding domain
C3496_RS19210	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS19220	PF04324	BFD-like [2Fe-2S] binding domain
C3496_RS19220	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS19235	PF08876	Domain of unknown function (DUF1836)
C3496_RS19240	PF09335	SNARE associated Golgi protein
C3496_RS19255	PF04914	DltD protein
C3496_RS19265	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS19270	PF18348	Bacterial dipeptidyl-peptidase Sh3 domain
C3496_RS19270	PF00877	NlpC/P60 family
C3496_RS19275	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
C3496_RS19275	PF13378	Enolase C-terminal domain-like
C3496_RS19290	PF01965	DJ-1/PfpI family
C3496_RS19295	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3496_RS19320	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
C3496_RS19320	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
C3496_RS19325	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS19325	PF16736	Single Cache-like 
C3496_RS19325	PF00989	PAS fold
C3496_RS19325	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS19330	PF00072	Response regulator receiver domain
C3496_RS19330	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS19350	PF01048	Phosphorylase superfamily
C3496_RS19355	PF03808	Glycosyl transferase WecB/TagA/CpsF family
C3496_RS19360	PF08439	Oligopeptidase F
C3496_RS19360	PF01432	Peptidase family M3
C3496_RS19365	PF13520	Amino acid permease
C3496_RS19370	PF01037	Lrp/AsnC ligand binding domain
C3496_RS19385	PF02645	Uncharacterised protein, DegV family COG1307
C3496_RS19410	PF07690	Major Facilitator Superfamily
C3496_RS19420	PF04519	Polymer-forming cytoskeletal
C3496_RS19425	PF13171	Protein of unknown function (DUF4004)
C3496_RS19430	PF12793	Sugar transport-related sRNA regulator N-term
C3496_RS19430	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS19435	PF07690	Major Facilitator Superfamily
C3496_RS19455	PF04226	Transglycosylase associated protein
C3496_RS19460	PF01156	Inosine-uridine preferring nucleoside hydrolase
C3496_RS19470	PF08241	Methyltransferase domain
C3496_RS19505	PF00155	Aminotransferase class I and II
C3496_RS19510	PF07977	FabA-like domain
C3496_RS19515	PF03630	Fumble 
C3496_RS19535	PF00005	ABC transporter
C3496_RS19585	PF01594	AI-2E family transporter
C3496_RS19595	PF00296	Luciferase-like monooxygenase
C3496_RS19600	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS19605	PF09084	NMT1/THI5 like
C3496_RS19610	PF00005	ABC transporter
C3496_RS19620	PF13344	Haloacid dehalogenase-like hydrolase
C3496_RS19620	PF00293	NUDIX domain
C3496_RS19640	PF02522	Aminoglycoside 3-N-acetyltransferase
C3496_RS19660	PF13536	Putative multidrug resistance efflux transporter
C3496_RS19665	PF12867	DinB superfamily
C3496_RS19685	PF08713	DNA alkylation repair enzyme
C3496_RS19690	PF01522	Polysaccharide deacetylase
C3496_RS19695	PF03611	PTS system sugar-specific permease component
C3496_RS19705	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
C3496_RS19710	PF03741	Integral membrane protein TerC family
C3496_RS19715	PF00884	Sulfatase
C3496_RS19720	PF00005	ABC transporter
C3496_RS19720	PF12848	ABC transporter
C3496_RS19730	PF03176	MMPL family
C3496_RS19735	PF16295	Tetracyclin repressor-like, C-terminal domain
C3496_RS19735	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS19745	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
C3496_RS19750	PF02153	Prephenate dehydrogenase
C3496_RS19750	PF01842	ACT domain
C3496_RS19755	PF00155	Aminotransferase class I and II
C3496_RS19760	PF01264	Chorismate synthase
C3496_RS19765	PF00793	DAHP synthetase I family
C3496_RS19765	PF01817	Chorismate mutase type II
C3496_RS19785	PF01636	Phosphotransferase enzyme family
C3496_RS19800	PF06725	3D domain
C3496_RS19800	PF01476	LysM domain
C3496_RS19815	PF00378	Enoyl-CoA hydratase/isomerase
C3496_RS19820	PF00501	AMP-binding enzyme
C3496_RS19820	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS19825	PF00989	PAS fold
C3496_RS19825	PF02954	Bacterial regulatory protein, Fis family
C3496_RS19825	PF00158	Sigma-54 interaction domain
C3496_RS19835	PF06039	Malate:quinone oxidoreductase (Mqo)
C3496_RS19840	PF13407	Periplasmic binding protein domain
C3496_RS19845	PF02653	Branched-chain amino acid transport system / permease component
C3496_RS19850	PF02653	Branched-chain amino acid transport system / permease component
C3496_RS19855	PF00005	ABC transporter
C3496_RS19860	PF04198	Putative sugar-binding domain
C3496_RS19860	PF00325	Bacterial regulatory proteins, crp family
C3496_RS19865	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
C3496_RS19865	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
C3496_RS19875	PF01791	DeoC/LacD family aldolase
C3496_RS19900	PF03992	Antibiotic biosynthesis monooxygenase
C3496_RS19920	PF01773	Na+ dependent nucleoside transporter N-terminus
C3496_RS19920	PF07662	Na+ dependent nucleoside transporter C-terminus
C3496_RS19925	PF00171	Aldehyde dehydrogenase family
C3496_RS19930	PF01472	PUA domain
C3496_RS19930	PF00696	Amino acid kinase family
C3496_RS19935	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3496_RS19935	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3496_RS19950	PF01546	Peptidase family M20/M25/M40
C3496_RS19955	PF09339	IclR helix-turn-helix domain
C3496_RS19955	PF01614	Bacterial transcriptional regulator
C3496_RS19960	PF00324	Amino acid permease
C3496_RS19965	PF01139	tRNA-splicing ligase RtcB
C3496_RS19970	PF00487	Fatty acid desaturase
C3496_RS19975	PF00245	Alkaline phosphatase
C3496_RS19980	PF11188	Protein of unknown function (DUF2975)
C3496_RS19985	PF13443	Cro/C1-type HTH DNA-binding domain
C3496_RS20000	PF10086	YhfC intramembrane metalloprotease
C3496_RS20010	PF04397	LytTr DNA-binding domain
C3496_RS20010	PF00072	Response regulator receiver domain
C3496_RS20020	PF13302	Acetyltransferase (GNAT) domain
C3496_RS20025	PF12681	Glyoxalase-like domain
C3496_RS20045	PF17863	AAA lid domain
C3496_RS20045	PF07726	ATPase family associated with various cellular activities (AAA)
C3496_RS20060	PF07690	Major Facilitator Superfamily
C3496_RS20070	PF00535	Glycosyl transferase family 2
C3496_RS20080	PF00535	Glycosyl transferase family 2
C3496_RS20085	PF00535	Glycosyl transferase family 2
C3496_RS20095	PF00202	Aminotransferase class-III
C3496_RS20100	PF00199	Catalase
C3496_RS20100	PF06628	Catalase-related immune-responsive
C3496_RS20110	PF01979	Amidohydrolase family
C3496_RS20110	PF13382	Adenine deaminase C-terminal domain
C3496_RS20120	PF01810	LysE type translocator
C3496_RS20125	PF08892	YqcI/YcgG family
C3496_RS20135	PF00144	Beta-lactamase
C3496_RS20160	PF00881	Nitroreductase family
C3496_RS20165	PF01047	MarR family
C3496_RS20170	PF14492	Elongation Factor G, domain II
C3496_RS20170	PF00009	Elongation factor Tu GTP binding domain
C3496_RS20170	PF03764	Elongation factor G, domain IV
C3496_RS20170	PF00679	Elongation factor G C-terminus
C3496_RS20180	PF00293	NUDIX domain
C3496_RS20185	PF05406	WGR domain
C3496_RS20195	PF00005	ABC transporter
C3496_RS20220	PF12833	Helix-turn-helix domain
C3496_RS20225	PF00583	Acetyltransferase (GNAT) family
C3496_RS20240	PF00892	EamA-like transporter family
C3496_RS20245	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS20245	PF00155	Aminotransferase class I and II
C3496_RS20250	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
C3496_RS20255	PF13031	Protein of unknown function (DUF3892)
C3496_RS20285	PF01925	Sulfite exporter TauE/SafE
C3496_RS20290	PF13302	Acetyltransferase (GNAT) domain
C3496_RS20295	PF00324	Amino acid permease
C3496_RS20305	PF08713	DNA alkylation repair enzyme
C3496_RS20310	PF06445	GyrI-like small molecule binding domain
C3496_RS20310	PF13411	MerR HTH family regulatory protein
C3496_RS20325	PF00293	NUDIX domain
C3496_RS20335	PF10502	Signal peptidase, peptidase S26 
C3496_RS20340	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS20340	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS20350	PF02146	Sir2 family
C3496_RS20355	PF01470	Pyroglutamyl peptidase
C3496_RS20370	PF03746	LamB/YcsF family
C3496_RS20375	PF02626	Carboxyltransferase domain, subdomain A and B 
C3496_RS20380	PF02682	Carboxyltransferase domain, subdomain C and D
C3496_RS20385	PF09339	IclR helix-turn-helix domain
C3496_RS20385	PF01614	Bacterial transcriptional regulator
C3496_RS20390	PF10502	Signal peptidase, peptidase S26 
C3496_RS20395	PF03932	CutC family
C3496_RS20400	PF07454	Stage II sporulation protein P (SpoIIP)
C3496_RS20420	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
C3496_RS20420	PF02770	Acyl-CoA dehydrogenase, middle domain
C3496_RS20420	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3496_RS20435	PF07670	Nucleoside recognition
C3496_RS20450	PF02915	Rubrerythrin
C3496_RS20460	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS20465	PF00391	PEP-utilising enzyme, mobile domain
C3496_RS20465	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
C3496_RS20475	PF00753	Metallo-beta-lactamase superfamily
C3496_RS20480	PF07875	Coat F domain
C3496_RS20485	PF08892	YqcI/YcgG family
C3496_RS20490	PF01810	LysE type translocator
C3496_RS20495	PF00324	Amino acid permease
C3496_RS20505	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3496_RS20510	PF10710	Protein of unknown function (DUF2512)
C3496_RS20515	PF11553	Protein of unknown function (DUF3231)
C3496_RS20520	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3496_RS20525	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS20525	PF13823	Alcohol dehydrogenase GroES-associated
C3496_RS20525	PF00107	Zinc-binding dehydrogenase
C3496_RS20535	PF10415	Fumarase C C-terminus
C3496_RS20535	PF00206	Lyase
C3496_RS20540	PF00710	Asparaginase, N-terminal
C3496_RS20540	PF17763	Glutaminase/Asparaginase C-terminal domain
C3496_RS20545	PF01381	Helix-turn-helix
C3496_RS20550	PF13276	HTH-like domain
C3496_RS20550	PF00665	Integrase core domain
C3496_RS20550	PF13333	Integrase core domain
C3496_RS20555	PF01541	GIY-YIG catalytic domain
C3496_RS20555	PF12826	Helix-hairpin-helix motif
C3496_RS20555	PF02151	UvrB/uvrC motif
C3496_RS20555	PF08459	UvrC Helix-hairpin-helix N-terminal
C3496_RS20560	PF13520	Amino acid permease
C3496_RS20565	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3496_RS20565	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3496_RS20575	PF00072	Response regulator receiver domain
C3496_RS20575	PF08664	YcbB domain
C3496_RS20580	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS20585	PF04960	Glutaminase
C3496_RS20590	PF01235	Sodium:alanine symporter family
C3496_RS20620	PF00149	Calcineurin-like phosphoesterase
C3496_RS20620	PF02872	5'-nucleotidase, C-terminal domain
C3496_RS20620	PF17936	Bacterial Ig domain
C3496_RS20625	PF06628	Catalase-related immune-responsive
C3496_RS20625	PF00199	Catalase
C3496_RS20630	PF00561	alpha/beta hydrolase fold
C3496_RS20635	PF00857	Isochorismatase family
C3496_RS20650	PF01979	Amidohydrolase family
C3496_RS20655	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS20655	PF03466	LysR substrate binding domain
C3496_RS20680	PF11181	Heat induced stress protein YflT
C3496_RS20710	PF03073	TspO/MBR family
C3496_RS20715	PF00875	DNA photolyase
C3496_RS20715	PF03441	FAD binding domain of DNA photolyase
C3496_RS20725	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
C3496_RS20730	PF00361	Proton-conducting membrane transporter
C3496_RS20730	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
C3496_RS20735	PF10057	Uncharacterized conserved protein (DUF2294)
C3496_RS20750	PF01040	UbiA prenyltransferase family
C3496_RS20755	PF00561	alpha/beta hydrolase fold
C3496_RS20760	PF12996	DUF based on E. rectale Gene description (DUF3880)
C3496_RS20765	PF00005	ABC transporter
C3496_RS20770	PF02687	FtsX-like permease family
C3496_RS20780	PF04397	LytTr DNA-binding domain
C3496_RS20780	PF00072	Response regulator receiver domain
C3496_RS20815	PF01451	Low molecular weight phosphotyrosine protein phosphatase
C3496_RS20820	PF01758	Sodium Bile acid symporter family
C3496_RS20825	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS20830	PF01022	Bacterial regulatory protein, arsR family
C3496_RS20845	PF00012	Hsp70 protein
C3496_RS20880	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS20900	PF12833	Helix-turn-helix domain
C3496_RS20900	PF02805	Metal binding domain of Ada
C3496_RS20910	PF00144	Beta-lactamase
C3496_RS20935	PF12802	MarR family
C3496_RS20940	PF00667	FAD binding domain
C3496_RS20940	PF00067	Cytochrome P450
C3496_RS20940	PF00175	Oxidoreductase NAD-binding domain 
C3496_RS20940	PF00258	Flavodoxin
C3496_RS20945	PF07690	Major Facilitator Superfamily
C3496_RS21000	PF00291	Pyridoxal-phosphate dependent enzyme
C3496_RS21010	PF00144	Beta-lactamase
C3496_RS21025	PF00753	Metallo-beta-lactamase superfamily
C3496_RS21030	PF01073	3-beta hydroxysteroid dehydrogenase/isomerase family
C3496_RS21040	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
C3496_RS21040	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
C3496_RS21045	PF04072	Leucine carboxyl methyltransferase
C3496_RS21060	PF00005	ABC transporter
C3496_RS21065	PF02687	FtsX-like permease family
C3496_RS21080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS21080	PF00672	HAMP domain
C3496_RS21080	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS21085	PF00072	Response regulator receiver domain
C3496_RS21085	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS21090	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS21090	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3496_RS21095	PF07690	Major Facilitator Superfamily
C3496_RS21100	PF02589	LUD domain
C3496_RS21105	PF02589	LUD domain
C3496_RS21105	PF11870	Domain of unknown function (DUF3390)
C3496_RS21105	PF13183	4Fe-4S dicluster domain
C3496_RS21110	PF02754	Cysteine-rich domain
C3496_RS21115	PF03466	LysR substrate binding domain
C3496_RS21115	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS21135	PF17676	LD-carboxypeptidase C-terminal domain
C3496_RS21135	PF02016	LD-carboxypeptidase N-terminal domain
C3496_RS21150	PF01842	ACT domain
C3496_RS21150	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3496_RS21150	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
C3496_RS21155	PF00266	Aminotransferase class-V
C3496_RS21170	PF07883	Cupin domain
C3496_RS21175	PF12833	Helix-turn-helix domain
C3496_RS21175	PF01497	Periplasmic binding protein
C3496_RS21190	PF04740	LXG domain of WXG superfamily
C3496_RS21190	PF14436	Bacterial EndoU nuclease
C3496_RS21195	PF01804	Penicillin amidase
C3496_RS21205	PF01510	N-acetylmuramoyl-L-alanine amidase
C3496_RS21205	PF01476	LysM domain
C3496_RS21205	PF01471	Putative peptidoglycan binding domain
C3496_RS21240	PF14044	NETI protein
C3496_RS21245	PF07690	Major Facilitator Superfamily
C3496_RS21255	PF12697	Alpha/beta hydrolase family
C3496_RS21260	PF01047	MarR family
C3496_RS21265	PF07690	Major Facilitator Superfamily
C3496_RS21275	PF17314	Family of unknown function (DUF5360)
C3496_RS21280	PF00893	Small Multidrug Resistance protein
C3496_RS21285	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS21290	PF01289	Thiol-activated cytolysin
C3496_RS21290	PF17440	Thiol-activated cytolysin beta sandwich domain
C3496_RS21295	PF02667	Short chain fatty acid transporter
C3496_RS21305	PF02525	Flavodoxin-like fold
C3496_RS21325	PF14256	YwiC-like protein
C3496_RS21335	PF00005	ABC transporter
C3496_RS21340	PF02361	Cobalt transport protein
C3496_RS21355	PF03737	Aldolase/RraA
C3496_RS21360	PF03606	C4-dicarboxylate anaerobic carrier
C3496_RS21380	PF07739	TipAS antibiotic-recognition domain
C3496_RS21380	PF13411	MerR HTH family regulatory protein
C3496_RS21425	PF04073	Aminoacyl-tRNA editing domain
C3496_RS21430	PF03129	Anticodon binding domain
C3496_RS21430	PF13393	Histidyl-tRNA synthetase
C3496_RS21440	PF01638	HxlR-like helix-turn-helix
C3496_RS21445	PF00881	Nitroreductase family
C3496_RS21455	PF00391	PEP-utilising enzyme, mobile domain
C3496_RS21455	PF02887	Pyruvate kinase, alpha/beta domain
C3496_RS21455	PF00224	Pyruvate kinase, barrel domain
C3496_RS21475	PF00005	ABC transporter
C3496_RS21500	PF13419	Haloacid dehalogenase-like hydrolase
C3496_RS21510	PF13350	Tyrosine phosphatase family
C3496_RS21530	PF00293	NUDIX domain
C3496_RS21530	PF13344	Haloacid dehalogenase-like hydrolase
C3496_RS21540	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS21545	PF00480	ROK family
C3496_RS21550	PF07690	Major Facilitator Superfamily
C3496_RS21555	PF12464	Maltose acetyltransferase 
C3496_RS21555	PF14602	Hexapeptide repeat of succinyl-transferase
C3496_RS21565	PF12704	MacB-like periplasmic core domain
C3496_RS21565	PF02687	FtsX-like permease family
C3496_RS21565	PF00005	ABC transporter
C3496_RS21575	PF00579	tRNA synthetases class I (W and Y)
C3496_RS21580	PF13288	DXP reductoisomerase C-terminal domain
C3496_RS21580	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
C3496_RS21580	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
C3496_RS21585	PF01594	AI-2E family transporter
C3496_RS21605	PF08241	Methyltransferase domain
C3496_RS21635	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS21645	PF00571	CBS domain
C3496_RS21645	PF03471	Transporter associated domain
C3496_RS21645	PF01595	Cyclin M transmembrane N-terminal domain
C3496_RS21650	PF13411	MerR HTH family regulatory protein
C3496_RS21660	PF00483	Nucleotidyl transferase
C3496_RS21665	PF16363	GDP-mannose 4,6 dehydratase
C3496_RS21670	PF08421	Putative zinc binding domain
C3496_RS21670	PF08484	C-methyltransferase C-terminal domain
C3496_RS21675	PF01370	NAD dependent epimerase/dehydratase family
C3496_RS21690	PF00892	EamA-like transporter family
C3496_RS21695	PF00805	Pentapeptide repeats (8 copies)
C3496_RS21700	PF06906	Protein of unknown function (DUF1272)
C3496_RS21705	PF10282	Lactonase, 7-bladed beta-propeller
C3496_RS21710	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
C3496_RS21710	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
C3496_RS21715	PF02447	GntP family permease
C3496_RS21720	PF00923	Transaldolase/Fructose-6-phosphate aldolase
C3496_RS21725	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3496_RS21725	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
C3496_RS21730	PF02780	Transketolase, C-terminal domain
C3496_RS21730	PF00456	Transketolase, thiamine diphosphate binding domain
C3496_RS21730	PF02779	Transketolase, pyrimidine binding domain
C3496_RS21735	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
C3496_RS21735	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
C3496_RS21740	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
C3496_RS21740	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
C3496_RS21745	PF00107	Zinc-binding dehydrogenase
C3496_RS21745	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS21750	PF00296	Luciferase-like monooxygenase
C3496_RS21755	PF16197	Ketoacyl-synthetase C-terminal extension
C3496_RS21755	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS21755	PF00550	Phosphopantetheine attachment site
C3496_RS21755	PF02801	Beta-ketoacyl synthase, C-terminal domain
C3496_RS21755	PF00698	Acyl transferase domain
C3496_RS21755	PF00109	Beta-ketoacyl synthase, N-terminal domain
C3496_RS21755	PF00107	Zinc-binding dehydrogenase
C3496_RS21755	PF14765	Polyketide synthase dehydratase
C3496_RS21755	PF08659	KR domain
C3496_RS21760	PF00106	short chain dehydrogenase
C3496_RS21765	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3496_RS21765	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3496_RS21765	PF01447	Thermolysin metallopeptidase, catalytic domain
C3496_RS21765	PF03413	Peptidase propeptide and YPEB domain
C3496_RS21775	PF12729	Four helix bundle sensory module for signal transduction
C3496_RS21775	PF00672	HAMP domain
C3496_RS21775	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3496_RS21780	PF06941	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
C3496_RS21785	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3496_RS21785	PF01872	RibD C-terminal domain
C3496_RS21790	PF00925	GTP cyclohydrolase II
C3496_RS21790	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
C3496_RS21795	PF01638	HxlR-like helix-turn-helix
C3496_RS21800	PF00144	Beta-lactamase
C3496_RS21810	PF03928	Haem-degrading
C3496_RS21825	PF01609	Transposase DDE domain
C3496_RS21855	PF03960	ArsC family
C3496_RS21860	PF01638	HxlR-like helix-turn-helix
C3496_RS21865	PF07702	UTRA domain
C3496_RS21865	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS21870	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
C3496_RS21870	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
C3496_RS21880	PF01638	HxlR-like helix-turn-helix
C3496_RS21885	PF01638	HxlR-like helix-turn-helix
C3496_RS21890	PF00248	Aldo/keto reductase family
C3496_RS21925	PF02567	Phenazine biosynthesis-like protein
C3496_RS21945	PF13302	Acetyltransferase (GNAT) domain
C3496_RS21950	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS21950	PF00501	AMP-binding enzyme
C3496_RS21955	PF02525	Flavodoxin-like fold
C3496_RS21960	PF01638	HxlR-like helix-turn-helix
C3496_RS21965	PF01022	Bacterial regulatory protein, arsR family
C3496_RS21970	PF01522	Polysaccharide deacetylase
C3496_RS21975	PF12791	Anti-sigma factor N-terminus
C3496_RS21980	PF04542	Sigma-70 region 2 
C3496_RS21995	PF00440	Bacterial regulatory proteins, tetR family
C3496_RS22015	PF05656	Protein of unknown function (DUF805)
C3496_RS22020	PF01061	ABC-2 type transporter
C3496_RS22025	PF00005	ABC transporter
C3496_RS22025	PF13732	Domain of unknown function (DUF4162)
C3496_RS22040	PF03063	Prismane/CO dehydrogenase family
C3496_RS22050	PF00753	Metallo-beta-lactamase superfamily
C3496_RS22055	PF01471	Putative peptidoglycan binding domain
C3496_RS22055	PF01183	Glycosyl hydrolases family 25
C3496_RS22080	PF00144	Beta-lactamase
C3496_RS22135	PF07726	ATPase family associated with various cellular activities (AAA)
C3496_RS22135	PF17863	AAA lid domain
C3496_RS22150	PF00005	ABC transporter
C3496_RS22170	PF00753	Metallo-beta-lactamase superfamily
C3496_RS22175	PF00107	Zinc-binding dehydrogenase
C3496_RS22175	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS22180	PF00324	Amino acid permease
C3496_RS22185	PF07690	Major Facilitator Superfamily
C3496_RS22210	PF02585	GlcNAc-PI de-N-acetylase
C3496_RS22215	PF08830	Protein of unknown function (DUF1806)
C3496_RS22220	PF03600	Citrate transporter
C3496_RS22230	PF01497	Periplasmic binding protein
C3496_RS22235	PF01032	FecCD transport family
C3496_RS22240	PF01032	FecCD transport family
C3496_RS22245	PF05675	Protein of unknown function (DUF817)
C3496_RS22250	PF02567	Phenazine biosynthesis-like protein
C3496_RS22255	PF13170	Protein of unknown function (DUF4003)
C3496_RS22275	PF10901	Protein of unknown function (DUF2690)
C3496_RS22285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS22285	PF03466	LysR substrate binding domain
C3496_RS22290	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS22290	PF00107	Zinc-binding dehydrogenase
C3496_RS22295	PF05175	Methyltransferase small domain
C3496_RS22295	PF17827	PrmC N-terminal domain
C3496_RS22310	PF01713	Smr domain
C3496_RS22310	PF00488	MutS domain V
C3496_RS22320	PF00128	Alpha amylase, catalytic domain
C3496_RS22320	PF09154	Domain of unknown function (DUF1939)
C3496_RS22325	PF00797	N-acetyltransferase
C3496_RS22330	PF08439	Oligopeptidase F
C3496_RS22330	PF01432	Peptidase family M3
C3496_RS22335	PF00144	Beta-lactamase
C3496_RS22340	PF07690	Major Facilitator Superfamily
C3496_RS22345	PF03466	LysR substrate binding domain
C3496_RS22345	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS22355	PF03009	Glycerophosphoryl diester phosphodiesterase family
C3496_RS22375	PF01494	FAD binding domain
C3496_RS22380	PF01022	Bacterial regulatory protein, arsR family
C3496_RS22385	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS22385	PF00107	Zinc-binding dehydrogenase
C3496_RS22390	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
C3496_RS22395	PF18801	response regulator aspartate phosphatase H, N terminal
C3496_RS22405	PF04299	Putative FMN-binding domain
C3496_RS22420	PF01758	Sodium Bile acid symporter family
C3496_RS22425	PF01565	FAD binding domain 
C3496_RS22425	PF02913	FAD linked oxidases, C-terminal domain
C3496_RS22450	PF00132	Bacterial transferase hexapeptide (six repeats)
C3496_RS22455	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
C3496_RS22460	PF00535	Glycosyl transferase family 2
C3496_RS22465	PF00378	Enoyl-CoA hydratase/isomerase
C3496_RS22470	PF08453	Peptidase family M9 N-terminal
C3496_RS22470	PF18496	Collagenase G catalytic helper subdomain
C3496_RS22470	PF01752	Collagenase
C3496_RS22475	PF02308	MgtC family
C3496_RS22490	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS22495	PF04294	VanW like protein
C3496_RS22505	PF13039	Protein of unknown function (DUF3900)
C3496_RS22505	PF13037	Domain of unknown function (DUF3898)
C3496_RS22520	PF00313	'Cold-shock' DNA-binding domain
C3496_RS22530	PF00258	Flavodoxin
C3496_RS22550	PF00132	Bacterial transferase hexapeptide (six repeats)
C3496_RS22560	PF00106	short chain dehydrogenase
C3496_RS22570	PF14698	Argininosuccinate lyase C-terminal
C3496_RS22570	PF00206	Lyase
C3496_RS22580	PF01156	Inosine-uridine preferring nucleoside hydrolase
C3496_RS22585	PF00474	Sodium:solute symporter family
C3496_RS22590	PF06196	Protein of unknown function (DUF997)
C3496_RS22595	PF00171	Aldehyde dehydrogenase family
C3496_RS22605	PF14151	YfhD-like protein
C3496_RS22610	PF13249	Squalene-hopene cyclase N-terminal domain
C3496_RS22610	PF13243	Squalene-hopene cyclase C-terminal domain
C3496_RS22615	PF02681	Divergent PAP2 family
C3496_RS22620	PF00892	EamA-like transporter family
C3496_RS22625	PF06961	Protein of unknown function (DUF1294)
C3496_RS22640	PF10609	NUBPL iron-transfer P-loop NTPase
C3496_RS22650	PF02391	MoaE protein
C3496_RS22655	PF00994	Probable molybdopterin binding domain
C3496_RS22655	PF03454	MoeA C-terminal region (domain IV)
C3496_RS22655	PF03453	MoeA N-terminal region (domain I and II)
C3496_RS22660	PF00899	ThiF family
C3496_RS22665	PF01226	Formate/nitrite transporter
C3496_RS22670	PF06463	Molybdenum Cofactor Synthesis C
C3496_RS22670	PF04055	Radical SAM superfamily
C3496_RS22675	PF02634	FdhD/NarQ family
C3496_RS22680	PF10057	Uncharacterized conserved protein (DUF2294)
C3496_RS22685	PF07849	Protein of unknown function (DUF1641)
C3496_RS22690	PF00037	4Fe-4S binding domain
C3496_RS22690	PF00384	Molybdopterin oxidoreductase
C3496_RS22690	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
C3496_RS22690	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C3496_RS22690	PF01568	Molydopterin dinucleotide binding domain
C3496_RS22695	PF03323	Bacillus/Clostridium GerA spore germination protein
C3496_RS22740	PF08241	Methyltransferase domain
C3496_RS22750	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS22755	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3496_RS22760	PF00375	Sodium:dicarboxylate symporter family
C3496_RS22765	PF03816	Cell envelope-related transcriptional attenuator domain
C3496_RS22775	PF08281	Sigma-70, region 4
C3496_RS22775	PF04542	Sigma-70 region 2 
C3496_RS22785	PF13732	Domain of unknown function (DUF4162)
C3496_RS22785	PF00005	ABC transporter
C3496_RS22795	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
C3496_RS22795	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
C3496_RS22800	PF03989	DNA gyrase C-terminal domain, beta-propeller
C3496_RS22800	PF00521	DNA gyrase/topoisomerase IV, subunit A
C3496_RS22805	PF01751	Toprim domain
C3496_RS22805	PF00986	DNA gyrase B subunit, carboxyl terminus
C3496_RS22805	PF00204	DNA gyrase B
C3496_RS22805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS22810	PF13380	CoA binding domain
C3496_RS22815	PF13180	PDZ domain
C3496_RS22820	PF00486	Transcriptional regulatory protein, C terminal
C3496_RS22820	PF00072	Response regulator receiver domain
C3496_RS22825	PF04055	Radical SAM superfamily
C3496_RS22830	PF13597	Anaerobic ribonucleoside-triphosphate reductase
C3496_RS22830	PF03477	ATP cone domain
C3496_RS22835	PF02660	Glycerol-3-phosphate acyltransferase
C3496_RS22840	PF01521	Iron-sulphur cluster biosynthesis
C3496_RS22845	PF03061	Thioesterase superfamily
C3496_RS22850	PF00704	Glycosyl hydrolases family 18
C3496_RS22850	PF01476	LysM domain
C3496_RS22860	PF08177	Small acid-soluble spore protein N family
C3496_RS22865	PF13040	Fur-regulated basic protein B
C3496_RS22870	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
C3496_RS22870	PF11490	DNA polymerase III polC-type N-terminus II
C3496_RS22870	PF14579	Helix-hairpin-helix motif
C3496_RS22870	PF02811	PHP domain
C3496_RS22870	PF00929	Exonuclease
C3496_RS22870	PF07733	Bacterial DNA polymerase III alpha NTPase domain
C3496_RS22870	PF01336	OB-fold nucleic acid binding domain
C3496_RS22875	PF00578	AhpC/TSA family
C3496_RS22890	PF00330	Aconitase family (aconitate hydratase)
C3496_RS22890	PF00694	Aconitase C-terminal domain
C3496_RS22900	PF01522	Polysaccharide deacetylase
C3496_RS22910	PF08179	Small acid-soluble spore protein P family
C3496_RS22920	PF07690	Major Facilitator Superfamily
C3496_RS22930	PF02272	DHHA1 domain
C3496_RS22930	PF01411	tRNA synthetases class II (A)
C3496_RS22930	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3496_RS22935	PF00293	NUDIX domain
C3496_RS22935	PF13344	Haloacid dehalogenase-like hydrolase
C3496_RS22945	PF02803	Thiolase, C-terminal domain
C3496_RS22945	PF00108	Thiolase, N-terminal domain
C3496_RS22950	PF00501	AMP-binding enzyme
C3496_RS22950	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS22955	PF02632	BioY family
C3496_RS22960	PF00501	AMP-binding enzyme
C3496_RS22960	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS22970	PF00005	ABC transporter
C3496_RS22975	PF01381	Helix-turn-helix
C3496_RS22995	PF05532	CsbD-like
C3496_RS23025	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS23025	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3496_RS23035	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS23035	PF13426	PAS domain
C3496_RS23035	PF00989	PAS fold
C3496_RS23035	PF13188	PAS domain
C3496_RS23035	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS23040	PF01738	Dienelactone hydrolase family
C3496_RS23045	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS23050	PF00474	Sodium:solute symporter family
C3496_RS23055	PF01645	Conserved region in glutamate synthase
C3496_RS23060	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
C3496_RS23065	PF02559	CarD-like/TRCF domain
C3496_RS23070	PF00491	Arginase family
C3496_RS23075	PF01979	Amidohydrolase family
C3496_RS23080	PF17392	Urocanase C-terminal domain
C3496_RS23080	PF17391	Urocanase N-terminal domain
C3496_RS23080	PF01175	Urocanase Rossmann-like domain
C3496_RS23085	PF00221	Aromatic amino acid lyase
C3496_RS23090	PF09021	HutP
C3496_RS23115	PF11084	Protein of unknown function (DUF2621)
C3496_RS23130	PF07301	Protein of unknown function (DUF1453)
C3496_RS23135	PF02683	Cytochrome C biogenesis protein transmembrane region
C3496_RS23145	PF07687	Peptidase dimerisation domain
C3496_RS23145	PF01546	Peptidase family M20/M25/M40
C3496_RS23155	PF00005	ABC transporter
C3496_RS23165	PF03466	LysR substrate binding domain
C3496_RS23165	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS23170	PF03788	LrgA family
C3496_RS23175	PF04172	LrgB-like family 
C3496_RS23180	PF13344	Haloacid dehalogenase-like hydrolase
C3496_RS23180	PF00293	NUDIX domain
C3496_RS23190	PF01925	Sulfite exporter TauE/SafE
C3496_RS23215	PF00664	ABC transporter transmembrane region
C3496_RS23215	PF00005	ABC transporter
C3496_RS23220	PF00664	ABC transporter transmembrane region
C3496_RS23220	PF00005	ABC transporter
C3496_RS23225	PF03672	Uncharacterised protein family (UPF0154)
C3496_RS23230	PF10747	Sporulation inhibitor of replication protein SirA 
C3496_RS23235	PF02779	Transketolase, pyrimidine binding domain
C3496_RS23235	PF00456	Transketolase, thiamine diphosphate binding domain
C3496_RS23235	PF02780	Transketolase, C-terminal domain
C3496_RS23240	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS23245	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS23250	PF00005	ABC transporter
C3496_RS23260	PF00149	Calcineurin-like phosphoesterase
C3496_RS23260	PF02872	5'-nucleotidase, C-terminal domain
C3496_RS23265	PF05979	Bacterial protein of unknown function (DUF896)
C3496_RS23270	PF00239	Resolvase, N terminal domain
C3496_RS23275	PF00717	Peptidase S24-like
C3496_RS23275	PF01726	LexA DNA binding domain
C3496_RS23290	PF03551	Transcriptional regulator PadR-like family
C3496_RS23300	PF01183	Glycosyl hydrolases family 25
C3496_RS23305	PF01551	Peptidase family M23
C3496_RS23305	PF10145	Phage-related minor tail protein
C3496_RS23305	PF01464	Transglycosylase SLT domain
C3496_RS23340	PF00717	Peptidase S24-like
C3496_RS23340	PF01726	LexA DNA binding domain
C3496_RS23345	PF00120	Glutamine synthetase, catalytic domain
C3496_RS23345	PF03951	Glutamine synthetase, beta-Grasp domain
C3496_RS23350	PF13411	MerR HTH family regulatory protein
C3496_RS23355	PF06838	Methionine gamma-lyase 
C3496_RS23360	PF13167	GTP-binding GTPase N-terminal
C3496_RS23360	PF01926	50S ribosome-binding GTPase
C3496_RS23360	PF16360	GTP-binding GTPase Middle Region
C3496_RS23365	PF03458	UPF0126 domain
C3496_RS23370	PF00004	ATPase family associated with various cellular activities (AAA)
C3496_RS23370	PF17866	AAA lid domain
C3496_RS23385	PF17209	Hfq protein
C3496_RS23400	PF06725	3D domain
C3496_RS23400	PF01476	LysM domain
C3496_RS23405	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
C3496_RS23405	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
C3496_RS23410	PF00294	pfkB family carbohydrate kinase
C3496_RS23415	PF00455	DeoR C terminal sensor domain
C3496_RS23415	PF08220	DeoR-like helix-turn-helix domain
C3496_RS23420	PF00465	Iron-containing alcohol dehydrogenase 
C3496_RS23425	PF04238	Protein of unknown function (DUF420)
C3496_RS23435	PF00324	Amino acid permease
C3496_RS23440	PF00704	Glycosyl hydrolases family 18
C3496_RS23440	PF00041	Fibronectin type III domain
C3496_RS23450	PF10518	TAT (twin-arginine translocation) pathway signal sequence
C3496_RS23450	PF00149	Calcineurin-like phosphoesterase
C3496_RS23455	PF01226	Formate/nitrite transporter
C3496_RS23460	PF00216	Bacterial DNA-binding protein
C3496_RS23470	PF00403	Heavy-metal-associated domain
C3496_RS23475	PF00403	Heavy-metal-associated domain
C3496_RS23480	PF02583	Metal-sensitive transcriptional repressor
C3496_RS23490	PF00756	Putative esterase
C3496_RS23495	PF00005	ABC transporter
C3496_RS23500	PF01032	FecCD transport family
C3496_RS23505	PF01032	FecCD transport family
C3496_RS23510	PF01497	Periplasmic binding protein
C3496_RS23515	PF03372	Endonuclease/Exonuclease/phosphatase family
C3496_RS23520	PF12833	Helix-turn-helix domain
C3496_RS23520	PF02805	Metal binding domain of Ada
C3496_RS23525	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
C3496_RS23525	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
C3496_RS23530	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3496_RS23530	PF07934	8-oxoguanine DNA glycosylase, N-terminal domain
C3496_RS23535	PF01546	Peptidase family M20/M25/M40
C3496_RS23535	PF07687	Peptidase dimerisation domain
C3496_RS23555	PF00561	alpha/beta hydrolase fold
C3496_RS23560	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS23565	PF03707	Bacterial signalling protein N terminal repeat
C3496_RS23565	PF00990	Diguanylate cyclase, GGDEF domain
C3496_RS23565	PF00563	EAL domain
C3496_RS23580	PF10787	Uncharacterised protein from bacillus cereus group
C3496_RS23585	PF03788	LrgA family
C3496_RS23590	PF00155	Aminotransferase class I and II
C3496_RS23590	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS23595	PF00364	Biotin-requiring enzyme
C3496_RS23595	PF00561	alpha/beta hydrolase fold
C3496_RS23600	PF02585	GlcNAc-PI de-N-acetylase
C3496_RS23615	PF00388	Phosphatidylinositol-specific phospholipase C, X domain
C3496_RS23620	PF00082	Subtilase family
C3496_RS23625	PF07486	Cell Wall Hydrolase
C3496_RS23635	PF00884	Sulfatase
C3496_RS23640	PF00350	Dynamin family
C3496_RS23650	PF01648	4'-phosphopantetheinyl transferase superfamily
C3496_RS23655	PF00975	Thioesterase domain
C3496_RS23660	PF16197	Ketoacyl-synthetase C-terminal extension
C3496_RS23660	PF00202	Aminotransferase class-III
C3496_RS23660	PF00550	Phosphopantetheine attachment site
C3496_RS23660	PF02801	Beta-ketoacyl synthase, C-terminal domain
C3496_RS23660	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS23660	PF00501	AMP-binding enzyme
C3496_RS23660	PF00668	Condensation domain
C3496_RS23660	PF00109	Beta-ketoacyl synthase, N-terminal domain
C3496_RS23665	PF14765	Polyketide synthase dehydratase
C3496_RS23665	PF00550	Phosphopantetheine attachment site
C3496_RS23665	PF00109	Beta-ketoacyl synthase, N-terminal domain
C3496_RS23665	PF02801	Beta-ketoacyl synthase, C-terminal domain
C3496_RS23665	PF16197	Ketoacyl-synthetase C-terminal extension
C3496_RS23665	PF08240	Alcohol dehydrogenase GroES-like domain
C3496_RS23665	PF00698	Acyl transferase domain
C3496_RS23665	PF08659	KR domain
C3496_RS23670	PF00550	Phosphopantetheine attachment site
C3496_RS23670	PF14765	Polyketide synthase dehydratase
C3496_RS23670	PF08659	KR domain
C3496_RS23670	PF02801	Beta-ketoacyl synthase, C-terminal domain
C3496_RS23670	PF00698	Acyl transferase domain
C3496_RS23670	PF16197	Ketoacyl-synthetase C-terminal extension
C3496_RS23670	PF00109	Beta-ketoacyl synthase, N-terminal domain
C3496_RS23675	PF00766	Electron transfer flavoprotein FAD-binding domain
C3496_RS23675	PF01012	Electron transfer flavoprotein domain
C3496_RS23680	PF01012	Electron transfer flavoprotein domain
C3496_RS23685	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3496_RS23685	PF02770	Acyl-CoA dehydrogenase, middle domain
C3496_RS23685	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3496_RS23700	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3496_RS23700	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3496_RS23705	PF00501	AMP-binding enzyme
C3496_RS23705	PF00550	Phosphopantetheine attachment site
C3496_RS23705	PF00668	Condensation domain
C3496_RS23705	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS23710	PF13193	AMP-binding enzyme C-terminal domain
C3496_RS23710	PF00550	Phosphopantetheine attachment site
C3496_RS23710	PF00501	AMP-binding enzyme
C3496_RS23710	PF00668	Condensation domain
C3496_RS23725	PF00005	ABC transporter
C3496_RS23740	PF01119	DNA mismatch repair protein, C-terminal domain
C3496_RS23740	PF08676	MutL C terminal dimerisation domain
C3496_RS23745	PF00488	MutS domain V
C3496_RS23745	PF01624	MutS domain I
C3496_RS23745	PF05190	MutS family domain IV
C3496_RS23745	PF05188	MutS domain II
C3496_RS23745	PF05192	MutS domain III
C3496_RS23750	PF10628	Outer spore coat protein E (CotE)
C3496_RS23755	PF06133	Control of competence regulator ComK, YlbF/YmcA
C3496_RS23760	PF04055	Radical SAM superfamily
C3496_RS23760	PF01938	TRAM domain
C3496_RS23760	PF00919	Uncharacterized protein family UPF0004
C3496_RS23765	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3496_RS23770	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
C3496_RS23770	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
C3496_RS23770	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
C3496_RS23775	PF01244	Membrane dipeptidase (Peptidase family M19)
C3496_RS23780	PF04232	Stage V sporulation protein S (SpoVS)
C3496_RS23785	PF13277	YmdB-like protein
C3496_RS23790	PF00013	KH domain
C3496_RS23790	PF01966	HD domain
C3496_RS23790	PF12072	Domain of unknown function (DUF3552)
C3496_RS23795	PF00154	recA bacterial DNA recombination protein
C3496_RS23805	PF00994	Probable molybdopterin binding domain
C3496_RS23805	PF02464	Competence-damaged protein
C3496_RS23805	PF18146	Damage-inducible protein CinA KH domain
C3496_RS23810	PF01066	CDP-alcohol phosphatidyltransferase
C3496_RS23815	PF13464	Domain of unknown function (DUF4115)
C3496_RS23820	PF11868	Protein of unknown function (DUF3388)
C3496_RS23825	PF11588	Protein of unknown function (DUF3243)
C3496_RS23835	PF05193	Peptidase M16 inactive domain
C3496_RS23835	PF00675	Insulinase (Peptidase family M16)
C3496_RS23840	PF05193	Peptidase M16 inactive domain
C3496_RS23845	PF02653	Branched-chain amino acid transport system / permease component
C3496_RS23850	PF02653	Branched-chain amino acid transport system / permease component
C3496_RS23855	PF00005	ABC transporter
C3496_RS23860	PF02608	ABC transporter substrate-binding protein PnrA-like
C3496_RS23865	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS23865	PF07702	UTRA domain
C3496_RS23870	PF09397	Ftsk gamma domain
C3496_RS23870	PF17854	FtsK alpha domain
C3496_RS23870	PF01580	FtsK/SpoIIIE family
C3496_RS23875	PF14035	YlzJ-like protein
C3496_RS23880	PF00574	Clp protease
C3496_RS23885	PF17770	Ribonuclease J C-terminal domain
C3496_RS23885	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
C3496_RS23885	PF00753	Metallo-beta-lactamase superfamily
C3496_RS23890	PF00701	Dihydrodipicolinate synthetase family
C3496_RS23895	PF13840	ACT domain 
C3496_RS23895	PF00696	Amino acid kinase family
C3496_RS23900	PF01118	Semialdehyde dehydrogenase, NAD binding domain
C3496_RS23900	PF02774	Semialdehyde dehydrogenase, dimerisation domain
C3496_RS23905	PF02441	Flavoprotein
C3496_RS23930	PF05105	Bacteriophage holin family 
C3496_RS23980	PF00589	Phage integrase family
C3496_RS24010	PF03796	DnaB-like helicase C terminal domain
C3496_RS24010	PF00772	DnaB-like helicase N terminal domain
C3496_RS24045	PF01381	Helix-turn-helix
C3496_RS24080	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
C3496_RS24080	PF16924	Dipicolinate synthase subunit A N-terminal domain
C3496_RS24085	PF05239	PRC-barrel domain
C3496_RS24090	PF00675	Insulinase (Peptidase family M16)
C3496_RS24090	PF05193	Peptidase M16 inactive domain
C3496_RS24095	PF01522	Polysaccharide deacetylase
C3496_RS24100	PF01138	3' exoribonuclease family, domain 1
C3496_RS24100	PF00013	KH domain
C3496_RS24100	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
C3496_RS24100	PF00575	S1 RNA binding domain
C3496_RS24100	PF03725	3' exoribonuclease family, domain 2
C3496_RS24105	PF00312	Ribosomal protein S15
C3496_RS24110	PF01687	Riboflavin kinase
C3496_RS24110	PF06574	FAD synthetase
C3496_RS24115	PF01509	TruB family pseudouridylate synthase (N terminal domain)
C3496_RS24115	PF16198	tRNA pseudouridylate synthase B C-terminal domain
C3496_RS24120	PF02033	Ribosome-binding factor A
C3496_RS24125	PF04456	Protein of unknown function (DUF503)
C3496_RS24130	PF00009	Elongation factor Tu GTP binding domain
C3496_RS24130	PF11987	Translation-initiation factor 2
C3496_RS24130	PF04760	Translation initiation factor IF-2, N-terminal region
C3496_RS24135	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
C3496_RS24140	PF04296	Protein of unknown function (DUF448)
C3496_RS24145	PF08529	NusA N-terminal domain
C3496_RS24145	PF00575	S1 RNA binding domain
C3496_RS24145	PF13184	NusA-like KH domain
C3496_RS24150	PF17384	RimP C-terminal SH3 domain
C3496_RS24150	PF02576	RimP N-terminal domain
C3496_RS24155	PF14480	DNA polymerase III polC-type N-terminus I
C3496_RS24155	PF07733	Bacterial DNA polymerase III alpha NTPase domain
C3496_RS24155	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
C3496_RS24155	PF14579	Helix-hairpin-helix motif
C3496_RS24155	PF02811	PHP domain
C3496_RS24155	PF00929	Exonuclease
C3496_RS24155	PF11490	DNA polymerase III polC-type N-terminus II
C3496_RS24160	PF04073	Aminoacyl-tRNA editing domain
C3496_RS24160	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3496_RS24160	PF03129	Anticodon binding domain
C3496_RS24165	PF02163	Peptidase family M50
C3496_RS24165	PF17820	PDZ domain
C3496_RS24170	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
C3496_RS24170	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
C3496_RS24170	PF13288	DXP reductoisomerase C-terminal domain
C3496_RS24180	PF01255	Putative undecaprenyl diphosphate synthase
C3496_RS24185	PF01765	Ribosome recycling factor
C3496_RS24190	PF00696	Amino acid kinase family
C3496_RS24195	PF00889	Elongation factor TS
C3496_RS24200	PF00318	Ribosomal protein S2
C3496_RS24205	PF06018	CodY GAF-like domain
C3496_RS24205	PF08222	CodY helix-turn-helix domain
C3496_RS24210	PF00004	ATPase family associated with various cellular activities (AAA)
C3496_RS24210	PF07724	AAA domain (Cdc48 subfamily)
C3496_RS24210	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3496_RS24215	PF00227	Proteasome subunit
C3496_RS24220	PF02899	Phage integrase, N-terminal SAM-like domain
C3496_RS24220	PF00589	Phage integrase family
C3496_RS24225	PF01134	Glucose inhibited division protein A
C3496_RS24230	PF01751	Toprim domain
C3496_RS24230	PF01131	DNA topoisomerase
C3496_RS24230	PF01396	Topoisomerase DNA binding C4 zinc finger
C3496_RS24235	PF02481	DNA recombination-mediator protein A
C3496_RS24240	PF02629	CoA binding domain
C3496_RS24240	PF00549	CoA-ligase
C3496_RS24245	PF08442	ATP-grasp domain
C3496_RS24245	PF00549	CoA-ligase
C3496_RS24250	PF01351	Ribonuclease HII
C3496_RS24255	PF01926	50S ribosome-binding GTPase
C3496_RS24260	PF10502	Signal peptidase, peptidase S26 
C3496_RS24265	PF01245	Ribosomal protein L19
C3496_RS24270	PF01746	tRNA (Guanine-1)-methyltransferase
C3496_RS24275	PF01782	RimM N-terminal domain
C3496_RS24275	PF05239	PRC-barrel domain
C3496_RS24285	PF00886	Ribosomal protein S16
C3496_RS24290	PF02881	SRP54-type protein, helical bundle domain
C3496_RS24290	PF00448	SRP54-type protein, GTPase domain
C3496_RS24290	PF02978	Signal peptide binding domain
C3496_RS24295	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
C3496_RS24300	PF02881	SRP54-type protein, helical bundle domain
C3496_RS24300	PF00448	SRP54-type protein, GTPase domain
C3496_RS24305	PF02463	RecF/RecN/SMC N terminal domain
C3496_RS24305	PF06470	SMC proteins Flexible Hinge Domain
C3496_RS24310	PF14622	Ribonuclease-III-like
C3496_RS24310	PF00035	Double-stranded RNA binding motif
C3496_RS24315	PF00550	Phosphopantetheine attachment site
C3496_RS24325	PF00698	Acyl transferase domain
C3496_RS24330	PF02504	Fatty acid synthesis protein
C3496_RS24335	PF03061	Thioesterase superfamily
C3496_RS24340	PF00270	DEAD/DEAH box helicase
C3496_RS24340	PF00271	Helicase conserved C-terminal domain
C3496_RS24340	PF17191	RecG wedge domain
C3496_RS24345	PF02734	DAK2 domain
C3496_RS24345	PF13684	Dihydroxyacetone kinase family
C3496_RS24350	PF03780	Asp23 family, cell envelope-related function
C3496_RS24355	PF00830	Ribosomal L28 family
C3496_RS24360	PF08183	Stage V sporulation protein family
C3496_RS24365	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
C3496_RS24365	PF04263	Thiamin pyrophosphokinase, catalytic domain
C3496_RS24370	PF00834	Ribulose-phosphate 3 epimerase family
C3496_RS24375	PF16745	RsgA N-terminal domain
C3496_RS24375	PF03193	RsgA GTPase
C3496_RS24380	PF03793	PASTA domain
C3496_RS24380	PF00069	Protein kinase domain
C3496_RS24390	PF04055	Radical SAM superfamily
C3496_RS24395	PF01029	NusB family
C3496_RS24395	PF01189	16S rRNA methyltransferase RsmB/F
C3496_RS24400	PF02911	Formyl transferase, C-terminal domain
C3496_RS24400	PF00551	Formyl transferase
C3496_RS24405	PF01327	Polypeptide deformylase
C3496_RS24410	PF00271	Helicase conserved C-terminal domain
C3496_RS24410	PF17764	3′ DNA-binding domain (3′BD)
C3496_RS24410	PF18074	Primosomal protein N C-terminal domain
C3496_RS24410	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
C3496_RS24410	PF04851	Type III restriction enzyme, res subunit
C3496_RS24415	PF04127	DNA / pantothenate metabolism flavoprotein
C3496_RS24415	PF02441	Flavoprotein
C3496_RS24420	PF01192	RNA polymerase Rpb6 
C3496_RS24425	PF00625	Guanylate kinase
C3496_RS24430	PF04025	Domain of unknown function (DUF370)
C3496_RS24435	PF03755	YicC-like family, N-terminal region 
C3496_RS24435	PF08340	Domain of unknown function (DUF1732)
C3496_RS24440	PF00690	Cation transporter/ATPase, N-terminus
C3496_RS24440	PF00689	Cation transporting ATPase, C-terminus
C3496_RS24445	PF05670	NFACT protein RNA binding domain
C3496_RS24450	PF01321	Creatinase/Prolidase N-terminal domain
C3496_RS24450	PF00557	Metallopeptidase family M24
C3496_RS24485	PF00156	Phosphoribosyl transferase domain
C3496_RS24490	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
C3496_RS24495	PF01180	Dihydroorotate dehydrogenase
C3496_RS24500	PF00175	Oxidoreductase NAD-binding domain 
C3496_RS24500	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
C3496_RS24505	PF02142	MGS-like domain
C3496_RS24505	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C3496_RS24505	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3496_RS24510	PF00117	Glutamine amidotransferase class-I
C3496_RS24510	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
C3496_RS24515	PF01979	Amidohydrolase family
C3496_RS24520	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
C3496_RS24520	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
C3496_RS24525	PF00860	Permease family
C3496_RS24530	PF00156	Phosphoribosyl transferase domain
C3496_RS24535	PF01479	S4 domain
C3496_RS24535	PF00849	RNA pseudouridylate synthase
C3496_RS24540	PF01252	Signal peptidase (SPase) II
C3496_RS24550	PF06827	Zinc finger found in FPG and IleRS
C3496_RS24550	PF00133	tRNA synthetases class I (I, L, M and V)
C3496_RS24550	PF08264	Anticodon-binding domain of tRNA
C3496_RS24555	PF05103	DivIVA protein
C3496_RS24560	PF17774	Putative RNA-binding domain in YlmH
C3496_RS24560	PF01479	S4 domain
C3496_RS24565	PF02325	YGGT family
C3496_RS24570	PF04472	Cell division protein SepF
C3496_RS24575	PF01168	Alanine racemase, N-terminal domain
C3496_RS24580	PF02578	Multi-copper polyphenol oxidoreductase laccase
C3496_RS24585	PF05239	PRC-barrel domain
C3496_RS24590	PF04542	Sigma-70 region 2 
C3496_RS24590	PF04539	Sigma-70 region 3
C3496_RS24590	PF04545	Sigma-70, region 4
C3496_RS24595	PF04545	Sigma-70, region 4
C3496_RS24595	PF04542	Sigma-70 region 2 
C3496_RS24600	PF03419	Sporulation factor SpoIIGA 
C3496_RS24605	PF00091	Tubulin/FtsZ family, GTPase domain
C3496_RS24605	PF12327	FtsZ family, C-terminal domain
C3496_RS24610	PF02491	SHS2 domain inserted in FTSA
C3496_RS24615	PF08478	POTRA domain, FtsQ-type
C3496_RS24615	PF03799	Cell division protein FtsQ
C3496_RS24620	PF01565	FAD binding domain 
C3496_RS24620	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
C3496_RS24625	PF04101	Glycosyltransferase family 28 C-terminal domain
C3496_RS24625	PF03033	Glycosyltransferase family 28 N-terminal domain
C3496_RS24630	PF01098	Cell cycle protein
C3496_RS24635	PF02875	Mur ligase family, glutamate ligase domain
C3496_RS24635	PF08245	Mur ligase middle domain
C3496_RS24640	PF00953	Glycosyl transferase family 4
C3496_RS24640	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
C3496_RS24645	PF02875	Mur ligase family, glutamate ligase domain
C3496_RS24645	PF08245	Mur ligase middle domain
C3496_RS24645	PF01225	Mur ligase family, catalytic domain
C3496_RS24650	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS24650	PF03793	PASTA domain
C3496_RS24650	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS24655	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS24655	PF03793	PASTA domain
C3496_RS24655	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS24660	PF04977	Septum formation initiator
C3496_RS24665	PF01795	MraW methylase family
C3496_RS24670	PF10079	Bacillithiol biosynthesis BshC 
C3496_RS24675	PF08546	Ketopantoate reductase PanE/ApbA C terminal
C3496_RS24675	PF02558	Ketopantoate reductase PanE/ApbA
C3496_RS24680	PF00583	Acetyltransferase (GNAT) family
C3496_RS24690	PF01783	Ribosomal L32p protein family
C3496_RS24695	PF02620	Large ribosomal RNA subunit accumulation protein YceD
C3496_RS24700	PF05636	HIGH Nucleotidyl Transferase
C3496_RS24705	PF05362	Lon protease (S16) C-terminal proteolytic domain
C3496_RS24705	PF13180	PDZ domain
C3496_RS24710	PF01734	Patatin-like phospholipase
C3496_RS24715	PF07670	Nucleoside recognition
C3496_RS24720	PF01467	Cytidylyltransferase-like
C3496_RS24735	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
C3496_RS24740	PF06133	Control of competence regulator ComK, YlbF/YmcA
C3496_RS24745	PF00300	Histidine phosphatase superfamily (branch 1)
C3496_RS24750	PF14003	YlbE-like protein
C3496_RS24755	PF14071	Putative coat protein
C3496_RS24760	PF00188	Cysteine-rich secretory protein family
C3496_RS24760	PF14504	CAP-associated N-terminal
C3496_RS24765	PF08868	YugN-like family
C3496_RS24770	PF00795	Carbon-nitrogen hydrolase
C3496_RS24775	PF09678	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
C3496_RS24780	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
C3496_RS24785	PF00510	Cytochrome c oxidase subunit III
C3496_RS24790	PF00115	Cytochrome C and Quinol oxidase polypeptide I
C3496_RS24795	PF00034	Cytochrome c
C3496_RS24795	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
C3496_RS24795	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
C3496_RS24800	PF01040	UbiA prenyltransferase family
C3496_RS24805	PF02628	Cytochrome oxidase assembly protein
C3496_RS24810	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3496_RS24810	PF00289	Biotin carboxylase, N-terminal domain
C3496_RS24810	PF00364	Biotin-requiring enzyme
C3496_RS24810	PF02436	Conserved carboxylase domain
C3496_RS24810	PF02785	Biotin carboxylase C-terminal domain
C3496_RS24810	PF00682	HMGL-like
C3496_RS24815	PF01098	Cell cycle protein
C3496_RS24820	PF07408	Protein of unknown function (DUF1507)
C3496_RS24830	PF02562	PhoH-like protein
C3496_RS24830	PF13638	PIN domain
C3496_RS24840	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
C3496_RS24850	PF14036	YlaH-like protein
C3496_RS24855	PF14492	Elongation Factor G, domain II
C3496_RS24855	PF03144	Elongation factor Tu domain 2
C3496_RS24855	PF00009	Elongation factor Tu GTP binding domain
C3496_RS24855	PF00679	Elongation factor G C-terminus
C3496_RS24865	PF00459	Inositol monophosphatase family
C3496_RS24875	PF06335	Protein of unknown function (DUF1054)
C3496_RS24880	PF05256	Uncharacterised protein family (UPF0223)
C3496_RS24885	PF01276	Orn/Lys/Arg decarboxylase, major domain
C3496_RS24885	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
C3496_RS24925	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS24925	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3496_RS24930	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3496_RS24930	PF00364	Biotin-requiring enzyme
C3496_RS24930	PF02817	e3 binding domain
C3496_RS24935	PF02780	Transketolase, C-terminal domain
C3496_RS24935	PF02779	Transketolase, pyrimidine binding domain
C3496_RS24940	PF00676	Dehydrogenase E1 component
C3496_RS24950	PF01327	Polypeptide deformylase
C3496_RS24960	PF07288	Protein of unknown function (DUF1447)
C3496_RS24965	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
C3496_RS24965	PF17770	Ribonuclease J C-terminal domain
C3496_RS24965	PF00753	Metallo-beta-lactamase superfamily
C3496_RS24970	PF02254	TrkA-N domain
C3496_RS24970	PF02080	TrkA-C domain
C3496_RS24980	PF01546	Peptidase family M20/M25/M40
C3496_RS24980	PF07687	Peptidase dimerisation domain
C3496_RS24985	PF00132	Bacterial transferase hexapeptide (six repeats)
C3496_RS24985	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
C3496_RS24985	PF14602	Hexapeptide repeat of succinyl-transferase
C3496_RS24990	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3496_RS24990	PF03466	LysR substrate binding domain
C3496_RS25005	PF04308	Ribonuclease H-like
C3496_RS25015	PF08796	Protein of unknown function (DUF1797)
C3496_RS25030	PF10388	EAL-domain associated signalling protein domain
C3496_RS25030	PF00563	EAL domain
C3496_RS25040	PF00149	Calcineurin-like phosphoesterase
C3496_RS25040	PF10518	TAT (twin-arginine translocation) pathway signal sequence
C3496_RS25050	PF17941	Polyphosphate kinase C-terminal domain 1
C3496_RS25050	PF13089	Polyphosphate kinase N-terminal domain
C3496_RS25050	PF02503	Polyphosphate kinase middle domain
C3496_RS25050	PF13090	Polyphosphate kinase C-terminal domain 2
C3496_RS25055	PF02541	Ppx/GppA phosphatase family
C3496_RS25060	PF14177	YkyB-like protein
C3496_RS25085	PF07690	Major Facilitator Superfamily
C3496_RS25095	PF08267	Cobalamin-independent synthase, N-terminal domain
C3496_RS25095	PF01717	Cobalamin-independent synthase, Catalytic domain
C3496_RS25105	PF14040	Deoxyribonuclease NucA/NucB
C3496_RS25115	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3496_RS25115	PF00512	His Kinase A (phospho-acceptor) domain
C3496_RS25125	PF00155	Aminotransferase class I and II
C3496_RS25130	PF00356	Bacterial regulatory proteins, lacI family
C3496_RS25130	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
C3496_RS25135	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS25140	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS25145	PF13416	Bacterial extracellular solute-binding protein
C3496_RS25150	PF00128	Alpha amylase, catalytic domain
C3496_RS25150	PF02903	Alpha amylase, N-terminal ig-like domain
C3496_RS25150	PF16657	Maltogenic Amylase, C-terminal domain
C3496_RS25155	PF00128	Alpha amylase, catalytic domain
C3496_RS25155	PF16657	Maltogenic Amylase, C-terminal domain
C3496_RS25160	PF00005	ABC transporter
C3496_RS25160	PF17912	MalK OB fold domain
C3496_RS25160	PF03459	TOBE domain
C3496_RS25200	PF02803	Thiolase, C-terminal domain
C3496_RS25200	PF00108	Thiolase, N-terminal domain
C3496_RS25205	PF00293	NUDIX domain
C3496_RS25235	PF03551	Transcriptional regulator PadR-like family
C3496_RS25250	PF01008	Initiation factor 2 subunit family
C3496_RS25255	PF01636	Phosphotransferase enzyme family
C3496_RS25260	PF00795	Carbon-nitrogen hydrolase
C3496_RS25265	PF00155	Aminotransferase class I and II
C3496_RS25270	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
C3496_RS25270	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
C3496_RS25280	PF00596	Class II Aldolase and Adducin N-terminal domain
C3496_RS25285	PF03079	ARD/ARD' family
C3496_RS25300	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3496_RS25300	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
C3496_RS25305	PF08448	PAS fold
C3496_RS25305	PF00990	Diguanylate cyclase, GGDEF domain
C3496_RS25310	PF00881	Nitroreductase family
C3496_RS25325	PF05524	PEP-utilising enzyme, N-terminal
C3496_RS25325	PF02896	PEP-utilising enzyme, TIM barrel domain
C3496_RS25325	PF00391	PEP-utilising enzyme, mobile domain
C3496_RS25330	PF00381	PTS HPr component phosphorylation site
C3496_RS25335	PF02378	Phosphotransferase system, EIIC 
C3496_RS25335	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
C3496_RS25335	PF00367	phosphotransferase system, EIIB
C3496_RS25340	PF03123	CAT RNA binding domain
C3496_RS25340	PF00874	PRD domain
C3496_RS25350	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS25350	PF07702	UTRA domain
C3496_RS25355	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
C3496_RS25360	PF01979	Amidohydrolase family
C3496_RS25370	PF04079	Segregation and condensation complex subunit ScpB
C3496_RS25375	PF02616	Segregation and condensation protein ScpA
C3496_RS25385	PF03745	Domain of unknown function (DUF309)
C3496_RS25390	PF00583	Acetyltransferase (GNAT) family
C3496_RS25395	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
C3496_RS25400	PF06207	Protein of unknown function (DUF1002)
C3496_RS25410	PF03323	Bacillus/Clostridium GerA spore germination protein
C3496_RS25415	PF14097	Stage V sporulation protein AE1
C3496_RS25420	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
C3496_RS25425	PF07451	Stage V sporulation protein AD (SpoVAD)
C3496_RS25430	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
C3496_RS25435	PF13782	Stage V sporulation protein AB
C3496_RS25440	PF12164	Stage V sporulation protein AA
C3496_RS25450	PF00209	Sodium:neurotransmitter symporter family
C3496_RS25455	PF04539	Sigma-70 region 3
C3496_RS25455	PF04545	Sigma-70, region 4
C3496_RS25455	PF04542	Sigma-70 region 2 
C3496_RS25460	PF13581	Histidine kinase-like ATPase domain
C3496_RS25465	PF01740	STAS domain
C3496_RS25470	PF00768	D-alanyl-D-alanine carboxypeptidase
C3496_RS25470	PF07943	Penicillin-binding protein 5, C-terminal domain
C3496_RS25475	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS25480	PF00005	ABC transporter
C3496_RS25495	PF01047	MarR family
C3496_RS25505	PF00860	Permease family
C3496_RS25510	PF01544	CorA-like Mg2+ transporter protein
C3496_RS25515	PF02885	Glycosyl transferase family, helical bundle domain
C3496_RS25515	PF00591	Glycosyl transferase family, a/b domain
C3496_RS25515	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
C3496_RS25520	PF01048	Phosphorylase superfamily
C3496_RS25525	PF01676	Metalloenzyme superfamily
C3496_RS25535	PF02899	Phage integrase, N-terminal SAM-like domain
C3496_RS25535	PF00589	Phage integrase family
C3496_RS25540	PF14004	Protein of unknown function (DUF4227)
C3496_RS25545	PF01475	Ferric uptake regulator family
C3496_RS25550	PF01944	Stage II sporulation protein M
C3496_RS25560	PF00293	NUDIX domain
C3496_RS25565	PF13072	Mother cell inhibitor of FtsZ
C3496_RS25570	PF00248	Aldo/keto reductase family
C3496_RS25575	PF00248	Aldo/keto reductase family
C3496_RS25580	PF13673	Acetyltransferase (GNAT) domain
C3496_RS25580	PF04229	GrpB protein
C3496_RS25590	PF00565	Staphylococcal nuclease homologue
C3496_RS25590	PF00149	Calcineurin-like phosphoesterase
C3496_RS25590	PF00746	LPXTG cell wall anchor motif
C3496_RS25590	PF02872	5'-nucleotidase, C-terminal domain
C3496_RS25600	PF12146	Serine aminopeptidase, S33
C3496_RS25605	PF03553	Na+/H+ antiporter family
C3496_RS25605	PF13726	Na+-H+ antiporter family
C3496_RS25610	PF00356	Bacterial regulatory proteins, lacI family
C3496_RS25615	PF00583	Acetyltransferase (GNAT) family
C3496_RS25620	PF12146	Serine aminopeptidase, S33
C3496_RS25625	PF10827	Protein of unknown function (DUF2552) 
C3496_RS25635	PF01872	RibD C-terminal domain
C3496_RS25635	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3496_RS25640	PF00677	Lumazine binding domain
C3496_RS25645	PF00925	GTP cyclohydrolase II
C3496_RS25645	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
C3496_RS25650	PF00885	6,7-dimethyl-8-ribityllumazine synthase
C3496_RS25660	PF04055	Radical SAM superfamily
C3496_RS25660	PF06968	Biotin and Thiamin Synthesis associated domain
C3496_RS25665	PF13847	Methyltransferase domain
C3496_RS25670	PF12697	Alpha/beta hydrolase family
C3496_RS25670	PF08241	Methyltransferase domain
C3496_RS25675	PF00155	Aminotransferase class I and II
C3496_RS25685	PF00202	Aminotransferase class-III
C3496_RS25695	PF03553	Na+/H+ antiporter family
C3496_RS25700	PF00149	Calcineurin-like phosphoesterase
C3496_RS25700	PF02872	5'-nucleotidase, C-terminal domain
C3496_RS25710	PF01037	Lrp/AsnC ligand binding domain
C3496_RS25710	PF13404	AsnC-type helix-turn-helix domain
C3496_RS25725	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
C3496_RS25725	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
C3496_RS25730	PF00202	Aminotransferase class-III
C3496_RS25735	PF00696	Amino acid kinase family
C3496_RS25740	PF01960	ArgJ family
C3496_RS25745	PF02774	Semialdehyde dehydrogenase, dimerisation domain
C3496_RS25745	PF01118	Semialdehyde dehydrogenase, NAD binding domain
C3496_RS25755	PF00106	short chain dehydrogenase
C3496_RS25760	PF00753	Metallo-beta-lactamase superfamily
C3496_RS25765	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3496_RS25765	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3496_RS25770	PF03313	Serine dehydratase alpha chain
C3496_RS25775	PF01842	ACT domain
C3496_RS25775	PF03315	Serine dehydratase beta chain
C3496_RS25785	PF12706	Beta-lactamase superfamily domain
C3496_RS25785	PF00753	Metallo-beta-lactamase superfamily
C3496_RS25795	PF11799	impB/mucB/samB family C-terminal domain
C3496_RS25795	PF00817	impB/mucB/samB family
C3496_RS25795	PF11798	IMS family HHH motif
C3496_RS25805	PF01546	Peptidase family M20/M25/M40
C3496_RS25805	PF07687	Peptidase dimerisation domain
C3496_RS25810	PF13302	Acetyltransferase (GNAT) domain
C3496_RS25825	PF03734	L,D-transpeptidase catalytic domain
C3496_RS25830	PF11728	Putative aromatic acid exporter C-terminal domain
C3496_RS25830	PF06081	Aromatic acid exporter family member 1
C3496_RS25835	PF00005	ABC transporter
C3496_RS25840	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS25845	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3496_RS25850	PF06491	Disulphide isomerase
C3496_RS25855	PF11208	Protein of unknown function (DUF2992)
C3496_RS25860	PF00293	NUDIX domain
C3496_RS25860	PF09297	NADH pyrophosphatase zinc ribbon domain
C3496_RS25865	PF04239	Protein of unknown function (DUF421)
C3496_RS25870	PF01098	Cell cycle protein
C3496_RS25875	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3496_RS25875	PF00364	Biotin-requiring enzyme
C3496_RS25875	PF02817	e3 binding domain
C3496_RS25880	PF02779	Transketolase, pyrimidine binding domain
C3496_RS25880	PF02780	Transketolase, C-terminal domain
C3496_RS25885	PF00676	Dehydrogenase E1 component
C3496_RS25890	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3496_RS25890	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3496_RS25895	PF00871	Acetokinase family
C3496_RS25900	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
C3496_RS25900	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C3496_RS25905	PF01515	Phosphate acetyl/butaryl transferase
C3496_RS25910	PF02954	Bacterial regulatory protein, Fis family
C3496_RS25910	PF00158	Sigma-54 interaction domain
C3496_RS25910	PF00989	PAS fold
C3496_RS25915	PF11118	Protein of unknown function (DUF2627)
C3496_RS25920	PF03009	Glycerophosphoryl diester phosphodiesterase family
C3496_RS25925	PF14174	YycC-like protein
C3496_RS25935	PF08769	Sporulation initiation factor Spo0A C terminal
C3496_RS25935	PF00072	Response regulator receiver domain
C3496_RS25940	PF17820	PDZ domain
C3496_RS25940	PF05580	SpoIVB peptidase S55
C3496_RS25945	PF13476	AAA domain
C3496_RS25950	PF01316	Arginine repressor, DNA binding domain
C3496_RS25950	PF02863	Arginine repressor, C-terminal domain
C3496_RS25955	PF01728	FtsJ-like methyltransferase
C3496_RS25955	PF01479	S4 domain
C3496_RS25960	PF02779	Transketolase, pyrimidine binding domain
C3496_RS25960	PF02780	Transketolase, C-terminal domain
C3496_RS25960	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
C3496_RS25965	PF00348	Polyprenyl synthetase
C3496_RS25970	PF02609	Exonuclease VII small subunit
C3496_RS25975	PF13742	OB-fold nucleic acid binding domain
C3496_RS25975	PF02601	Exonuclease VII, large subunit
C3496_RS25980	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
C3496_RS25980	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
C3496_RS25985	PF01029	NusB family
C3496_RS25990	PF03780	Asp23 family, cell envelope-related function
C3496_RS25995	PF02785	Biotin carboxylase C-terminal domain
C3496_RS25995	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3496_RS25995	PF00289	Biotin carboxylase, N-terminal domain
C3496_RS26000	PF00364	Biotin-requiring enzyme
C3496_RS26010	PF12685	SpoIIIAH-like protein
C3496_RS26020	PF09581	Stage III sporulation protein AF (Spore_III_AF)
C3496_RS26025	PF09546	Stage III sporulation protein AE (spore_III_AE)
C3496_RS26030	PF06686	Stage III sporulation protein AC/AD protein family
C3496_RS26035	PF06686	Stage III sporulation protein AC/AD protein family
C3496_RS26040	PF09548	Stage III sporulation protein AB (spore_III_AB)
C3496_RS26065	PF09285	Elongation factor P, C-terminal
C3496_RS26065	PF08207	Elongation factor P (EF-P) KOW-like domain
C3496_RS26065	PF01132	Elongation factor P (EF-P) OB domain
C3496_RS26070	PF00557	Metallopeptidase family M24
C3496_RS26070	PF01321	Creatinase/Prolidase N-terminal domain
C3496_RS26075	PF01220	Dehydroquinase class II
C3496_RS26080	PF11085	Conserved membrane protein YqhR
C3496_RS26085	PF07136	Protein of unknown function (DUF1385)
C3496_RS26095	PF13419	Haloacid dehalogenase-like hydrolase
C3496_RS26100	PF02742	Iron dependent repressor, metal binding and dimerisation domain
C3496_RS26100	PF01325	Iron dependent repressor, N-terminal DNA binding domain
C3496_RS26130	PF03099	Biotin/lipoate A/B protein ligase family
C3496_RS26135	PF00581	Rhodanese-like domain
C3496_RS26140	PF00356	Bacterial regulatory proteins, lacI family
C3496_RS26140	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
C3496_RS26150	PF00893	Small Multidrug Resistance protein
C3496_RS26155	PF00893	Small Multidrug Resistance protein
C3496_RS26190	PF00005	ABC transporter
C3496_RS26195	PF00392	Bacterial regulatory proteins, gntR family
C3496_RS26210	PF02347	Glycine cleavage system P-protein
C3496_RS26215	PF02347	Glycine cleavage system P-protein
C3496_RS26220	PF01571	Aminomethyltransferase folate-binding domain
C3496_RS26220	PF08669	Glycine cleavage T-protein C-terminal barrel domain
C3496_RS26225	PF00271	Helicase conserved C-terminal domain
C3496_RS26225	PF00176	SNF2 family N-terminal domain
C3496_RS26230	PF11079	Bacterial protein YqhG of unknown function
C3496_RS26250	PF14038	YqzE-like protein
C3496_RS26255	PF01202	Shikimate kinase
C3496_RS26280	PF07963	Prokaryotic N-terminal methylation motif
C3496_RS26290	PF00482	Type II secretion system (T2SS), protein F
C3496_RS26295	PF00437	Type II/IV secretion system protein
C3496_RS26305	PF11117	Protein of unknown function (DUF2626)
C3496_RS26310	PF00375	Sodium:dicarboxylate symporter family
C3496_RS26340	PF04101	Glycosyltransferase family 28 C-terminal domain
C3496_RS26340	PF03033	Glycosyltransferase family 28 N-terminal domain
C3496_RS26345	PF02574	Homocysteine S-methyltransferase
C3496_RS26345	PF00809	Pterin binding enzyme
C3496_RS26345	PF02965	Vitamin B12 dependent methionine synthase, activation domain
C3496_RS26345	PF02607	B12 binding domain
C3496_RS26345	PF02310	B12 binding domain
C3496_RS26350	PF02574	Homocysteine S-methyltransferase
C3496_RS26350	PF02219	Methylenetetrahydrofolate reductase
C3496_RS26355	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3496_RS26360	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3496_RS26370	PF01022	Bacterial regulatory protein, arsR family
C3496_RS26380	PF00753	Metallo-beta-lactamase superfamily
C3496_RS26385	PF10958	Protein of unknown function (DUF2759)
C3496_RS26390	PF00480	ROK family
C3496_RS26395	PF06014	Bacterial protein of unknown function (DUF910)
C3496_RS26400	PF01812	5-formyltetrahydrofolate cyclo-ligase family
C3496_RS26405	PF00471	Ribosomal protein L33
C3496_RS26410	PF00483	Nucleotidyl transferase
C3496_RS26415	PF01895	PhoU domain
C3496_RS26420	PF00005	ABC transporter
C3496_RS26425	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS26430	PF00528	Binding-protein-dependent transport system inner membrane component
C3496_RS26435	PF12849	PBP superfamily domain
C3496_RS26440	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS26440	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS26445	PF07690	Major Facilitator Superfamily
C3496_RS26450	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
C3496_RS26450	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
C3496_RS26470	PF04551	GcpE protein
C3496_RS26475	PF01475	Ferric uptake regulator family
C3496_RS26480	PF00950	ABC 3 transport family
C3496_RS26485	PF00005	ABC transporter
C3496_RS26490	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3496_RS26490	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3496_RS26495	PF11116	Protein of unknown function (DUF2624)
C3496_RS26500	PF01261	Xylose isomerase-like TIM barrel
C3496_RS26505	PF00270	DEAD/DEAH box helicase
C3496_RS26505	PF00271	Helicase conserved C-terminal domain
C3496_RS26515	PF02401	LytB protein
C3496_RS26520	PF01784	NIF3 (NGG1p interacting factor 3)
C3496_RS26525	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
C3496_RS26530	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
C3496_RS26535	PF00140	Sigma-70 factor, region 1.2
C3496_RS26535	PF04539	Sigma-70 region 3
C3496_RS26535	PF03979	Sigma-70 factor, region 1.1
C3496_RS26535	PF04545	Sigma-70, region 4
C3496_RS26535	PF04542	Sigma-70 region 2 
C3496_RS26540	PF01807	CHC2 zinc finger
C3496_RS26540	PF08275	DNA primase catalytic core, N-terminal domain
C3496_RS26540	PF10410	DnaB-helicase binding domain of primase
C3496_RS26545	PF03618	Kinase/pyrophosphorylase
C3496_RS26550	PF00571	CBS domain
C3496_RS26550	PF08279	HTH domain
C3496_RS26555	PF11967	Recombination protein O N terminal
C3496_RS26555	PF02565	Recombination protein O C terminal
C3496_RS26565	PF07650	KH domain
C3496_RS26565	PF01926	50S ribosome-binding GTPase
C3496_RS26570	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3496_RS26575	PF01219	Prokaryotic diacylglycerol kinase
C3496_RS26580	PF02130	Uncharacterized protein family UPF0054
C3496_RS26585	PF01966	HD domain
C3496_RS26585	PF07697	7TM-HD extracellular
C3496_RS26585	PF07698	7TM receptor with intracellular HD hydrolase
C3496_RS26590	PF02562	PhoH-like protein
C3496_RS26595	PF06898	Putative stage IV sporulation protein YqfD
C3496_RS26600	PF07873	YabP family
C3496_RS26605	PF09424	Yqey-like protein
C3496_RS26610	PF01165	Ribosomal protein S21
C3496_RS26615	PF04055	Radical SAM superfamily
C3496_RS26615	PF01938	TRAM domain
C3496_RS26615	PF00919	Uncharacterized protein family UPF0004
C3496_RS26620	PF04452	RNA methyltransferase
C3496_RS26630	PF00684	DnaJ central domain
C3496_RS26630	PF01556	DnaJ C terminal domain
C3496_RS26630	PF00226	DnaJ domain
C3496_RS26635	PF00012	Hsp70 protein
C3496_RS26640	PF01025	GrpE
C3496_RS26645	PF01628	HrcA protein C terminal domain
C3496_RS26650	PF04055	Radical SAM superfamily
C3496_RS26650	PF06969	HemN C-terminal domain
C3496_RS26655	PF01638	HxlR-like helix-turn-helix
C3496_RS26660	PF06421	GTP-binding protein LepA C-terminus
C3496_RS26660	PF00679	Elongation factor G C-terminus
C3496_RS26660	PF03144	Elongation factor Tu domain 2
C3496_RS26660	PF00009	Elongation factor Tu GTP binding domain
C3496_RS26670	PF03418	Germination protease
C3496_RS26675	PF01649	Ribosomal protein S20
C3496_RS26680	PF06144	DNA polymerase III, delta subunit
C3496_RS26685	PF14141	YqzM-like protein
C3496_RS26690	PF03772	Competence protein
C3496_RS26690	PF00753	Metallo-beta-lactamase superfamily
C3496_RS26690	PF13567	Domain of unknown function (DUF4131)
C3496_RS26695	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3496_RS26700	PF10531	SLBB domain
C3496_RS26705	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3496_RS26705	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3496_RS26710	PF13649	Methyltransferase domain
C3496_RS26720	PF01966	HD domain
C3496_RS26725	PF01467	Cytidylyltransferase-like
C3496_RS26730	PF01985	CRS1 / YhbY (CRM) domain
C3496_RS26735	PF01488	Shikimate / quinate 5-dehydrogenase
C3496_RS26735	PF08501	Shikimate dehydrogenase substrate binding domain
C3496_RS26735	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
C3496_RS26740	PF01926	50S ribosome-binding GTPase
C3496_RS26755	PF02666	Phosphatidylserine decarboxylase
C3496_RS26760	PF04545	Sigma-70, region 4
C3496_RS26760	PF04542	Sigma-70 region 2 
C3496_RS26770	PF16244	Domain of unknown function (DUF4901)
C3496_RS26775	PF00471	Ribosomal protein L33
C3496_RS26780	PF00881	Nitroreductase family
C3496_RS26785	PF04607	Region found in RelA / SpoT proteins
C3496_RS26795	PF00245	Alkaline phosphatase
C3496_RS26805	PF08386	TAP-like protein
C3496_RS26805	PF00561	alpha/beta hydrolase fold
C3496_RS26840	PF00082	Subtilase family
C3496_RS26840	PF02225	PA domain
C3496_RS26840	PF05922	Peptidase inhibitor I9
C3496_RS26840	PF13860	FlgD Ig-like domain
C3496_RS26845	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
C3496_RS26855	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3496_RS26860	PF07681	DoxX
C3496_RS26890	PF00005	ABC transporter
C3496_RS26895	PF01032	FecCD transport family
C3496_RS26900	PF01497	Periplasmic binding protein
C3496_RS26905	PF14143	YrhC-like protein
C3496_RS26910	PF00465	Iron-containing alcohol dehydrogenase 
C3496_RS26910	PF00171	Aldehyde dehydrogenase family
C3496_RS26915	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3496_RS26920	PF00291	Pyridoxal-phosphate dependent enzyme
C3496_RS26925	PF01048	Phosphorylase superfamily
C3496_RS26930	PF08241	Methyltransferase domain
C3496_RS26945	PF03717	Penicillin-binding Protein dimerisation domain
C3496_RS26945	PF00905	Penicillin binding protein transpeptidase domain
C3496_RS26955	PF01272	Transcription elongation factor, GreA/GreB, C-term
C3496_RS26955	PF03449	Transcription elongation factor, N-terminal
C3496_RS26960	PF00485	Phosphoribulokinase / Uridine kinase family
C3496_RS26965	PF16325	Peptidase family U32 C-terminal domain
C3496_RS26965	PF01136	Peptidase family U32
C3496_RS26970	PF01136	Peptidase family U32
C3496_RS26975	PF01596	O-methyltransferase
C3496_RS26980	PF02618	YceG-like family
C3496_RS26985	PF06949	Protein of unknown function (DUF1292)
C3496_RS26990	PF03652	Holliday junction resolvase
C3496_RS26995	PF06135	IreB regulatory phosphoprotein
C3496_RS27000	PF01411	tRNA synthetases class II (A)
C3496_RS27000	PF02272	DHHA1 domain
C3496_RS27000	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3496_RS27010	PF01594	AI-2E family transporter
C3496_RS27030	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
C3496_RS27030	PF13538	UvrD-like helicase C-terminal domain
C3496_RS27030	PF14490	Helix-hairpin-helix containing domain
C3496_RS27045	PF00266	Aminotransferase class-V
C3496_RS27050	PF02082	Transcriptional regulator
C3496_RS27055	PF16193	AAA C-terminal domain
C3496_RS27055	PF05496	Holliday junction DNA helicase RuvB P-loop domain
C3496_RS27055	PF12002	MgsA AAA+ ATPase C terminal
C3496_RS27065	PF00899	ThiF family
C3496_RS27070	PF01336	OB-fold nucleic acid binding domain
C3496_RS27070	PF02938	GAD domain
C3496_RS27070	PF00152	tRNA synthetases class II (D, K and N) 
C3496_RS27075	PF13393	Histidyl-tRNA synthetase
C3496_RS27075	PF03129	Anticodon binding domain
C3496_RS27090	PF02580	D-Tyr-tRNA(Tyr) deacylase
C3496_RS27095	PF04607	Region found in RelA / SpoT proteins
C3496_RS27095	PF13291	ACT domain
C3496_RS27095	PF02824	TGS domain
C3496_RS27100	PF00156	Phosphoribosyl transferase domain
