locus-tag	class	description
DNQ11_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
DNQ11_RS00005	PF00308	Bacterial dnaA  protein
DNQ11_RS00005	PF11638	DnaA N-terminal domain
DNQ11_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
DNQ11_RS00010	PF02767	DNA polymerase III beta subunit, central domain
DNQ11_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
DNQ11_RS00020	PF02463	RecF/RecN/SMC N terminal domain
DNQ11_RS00025	PF00204	DNA gyrase B
DNQ11_RS00025	PF00986	DNA gyrase B subunit, carboxyl terminus
DNQ11_RS00025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS00025	PF01751	Toprim domain
DNQ11_RS00030	PF00521	DNA gyrase/topoisomerase IV, subunit A
DNQ11_RS00030	PF03989	DNA gyrase C-terminal domain, beta-propeller
DNQ11_RS00060	PF14175	YaaC-like Protein
DNQ11_RS00065	PF00478	IMP dehydrogenase / GMP reductase domain
DNQ11_RS00065	PF00571	CBS domain
DNQ11_RS00070	PF00768	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS00070	PF07943	Penicillin-binding protein 5, C-terminal domain
DNQ11_RS00075	PF01680	SOR/SNZ family
DNQ11_RS00080	PF01174	SNO glutamine amidotransferase family
DNQ11_RS00085	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
DNQ11_RS00085	PF02403	Seryl-tRNA synthetase N-terminal domain
DNQ11_RS00100	PF01712	Deoxynucleoside kinase
DNQ11_RS00105	PF01712	Deoxynucleoside kinase
DNQ11_RS00110	PF00857	Isochorismatase family
DNQ11_RS00120	PF14437	MafB19-like deaminase
DNQ11_RS00130	PF12169	DNA polymerase III subunits gamma and tau domain III
DNQ11_RS00135	PF02575	YbaB/EbfC DNA-binding family
DNQ11_RS00140	PF13662	Toprim domain
DNQ11_RS00140	PF02132	RecR protein
DNQ11_RS00145	PF10704	Protein of unknown function (DUF2508)
DNQ11_RS00150	PF07441	SigmaK-factor processing regulatory protein BofA
DNQ11_RS00185	PF01276	Orn/Lys/Arg decarboxylase, major domain
DNQ11_RS00185	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
DNQ11_RS00190	PF02223	Thymidylate kinase
DNQ11_RS00195	PF09115	DNA polymerase III, delta subunit, C terminal
DNQ11_RS00200	PF04468	PSP1 C-terminal conserved region
DNQ11_RS00205	PF06156	Initiation control protein YabA
DNQ11_RS00210	PF05175	Methyltransferase small domain
DNQ11_RS00215	PF01541	GIY-YIG catalytic domain
DNQ11_RS00220	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
DNQ11_RS00225	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
DNQ11_RS00225	PF18277	AbrB C-terminal domain
DNQ11_RS00230	PF01588	Putative tRNA binding domain
DNQ11_RS00230	PF09334	tRNA synthetases class I (M)
DNQ11_RS00230	PF08264	Anticodon-binding domain of tRNA
DNQ11_RS00235	PF01026	TatD related DNase
DNQ11_RS00240	PF13331	Domain of unknown function (DUF4093)
DNQ11_RS00240	PF13662	Toprim domain
DNQ11_RS00245	PF00398	Ribosomal RNA adenine dimethylase
DNQ11_RS00250	PF05582	YabG peptidase U57
DNQ11_RS00255	PF06257	Biofilm formation stimulator VEG
DNQ11_RS00260	PF00269	Small, acid-soluble spore proteins, alpha/beta type
DNQ11_RS00265	PF08544	GHMP kinases C terminal 
DNQ11_RS00265	PF00288	GHMP kinases N terminal domain
DNQ11_RS00270	PF00156	Phosphoribosyl transferase domain
DNQ11_RS00270	PF09182	Bacterial purine repressor, N-terminal
DNQ11_RS00280	PF01042	Endoribonuclease L-PSP
DNQ11_RS00285	PF04026	SpoVG
DNQ11_RS00290	PF00483	Nucleotidyl transferase
DNQ11_RS00290	PF00132	Bacterial transferase hexapeptide (six repeats)
DNQ11_RS00295	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
DNQ11_RS00295	PF14572	Phosphoribosyl synthetase-associated domain
DNQ11_RS00300	PF01195	Peptidyl-tRNA hydrolase
DNQ11_RS00310	PF00270	DEAD/DEAH box helicase
DNQ11_RS00310	PF00271	Helicase conserved C-terminal domain
DNQ11_RS00310	PF03461	TRCF domain
DNQ11_RS00310	PF17757	UvrB interaction domain
DNQ11_RS00310	PF02559	CarD-like/TRCF domain
DNQ11_RS00315	PF15714	Stage V sporulation protein T C-terminal, transcription factor
DNQ11_RS00315	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
DNQ11_RS00320	PF01943	Polysaccharide biosynthesis protein
DNQ11_RS00320	PF14667	Polysaccharide biosynthesis C-terminal domain
DNQ11_RS00325	PF03819	MazG nucleotide pyrophosphohydrolase domain
DNQ11_RS00325	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
DNQ11_RS00330	PF01479	S4 domain
DNQ11_RS00335	PF07873	YabP family
DNQ11_RS00340	PF09578	Spore cortex protein YabQ (Spore_YabQ)
DNQ11_RS00350	PF00575	S1 RNA binding domain
DNQ11_RS00365	PF07228	Stage II sporulation protein E (SpoIIE)
DNQ11_RS00370	PF01171	PP-loop family
DNQ11_RS00370	PF09179	TilS substrate binding domain
DNQ11_RS00370	PF11734	TilS substrate C-terminal domain
DNQ11_RS00375	PF00156	Phosphoribosyl transferase domain
DNQ11_RS00380	PF06480	FtsH Extracellular
DNQ11_RS00380	PF17862	AAA+ lid domain
DNQ11_RS00380	PF00004	ATPase family associated with various cellular activities (AAA)
DNQ11_RS00380	PF01434	Peptidase family M41
DNQ11_RS00385	PF03309	Type III pantothenate kinase
DNQ11_RS00390	PF01430	Hsp33 protein
DNQ11_RS00395	PF00291	Pyridoxal-phosphate dependent enzyme
DNQ11_RS00400	PF00425	chorismate binding enzyme
DNQ11_RS00400	PF04715	Anthranilate synthase component I, N terminal region
DNQ11_RS00405	PF00117	Glutamine amidotransferase class-I
DNQ11_RS00410	PF01063	Amino-transferase class IV
DNQ11_RS00415	PF00809	Pterin binding enzyme
DNQ11_RS00420	PF02152	Dihydroneopterin aldolase
DNQ11_RS00425	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
DNQ11_RS00430	PF01381	Helix-turn-helix
DNQ11_RS00435	PF01207	Dihydrouridine synthase (Dus)
DNQ11_RS00440	PF00152	tRNA synthetases class II (D, K and N) 
DNQ11_RS00440	PF01336	OB-fold nucleic acid binding domain
DNQ11_RS00460	PF17727	CtsR C-terminal dimerization domain
DNQ11_RS00460	PF05848	CtsR N-terminal HTH domain
DNQ11_RS00465	PF02151	UvrB/uvrC motif
DNQ11_RS00470	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
DNQ11_RS00475	PF00004	ATPase family associated with various cellular activities (AAA)
DNQ11_RS00475	PF07724	AAA domain (Cdc48 subfamily)
DNQ11_RS00475	PF17871	AAA lid domain
DNQ11_RS00475	PF02861	Clp amino terminal domain, pathogenicity island component
DNQ11_RS00475	PF10431	C-terminal, D2-small domain, of ClpB protein 
DNQ11_RS00480	PF18073	Rubredoxin metal binding domain
DNQ11_RS00485	PF02457	DisA bacterial checkpoint controller nucleotide-binding
DNQ11_RS00485	PF10635	DisA bacterial checkpoint controller linker region 
DNQ11_RS00495	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
DNQ11_RS00500	PF02542	YgbB family
DNQ11_RS00505	PF00749	tRNA synthetases class I (E and Q), catalytic domain
DNQ11_RS00510	PF00132	Bacterial transferase hexapeptide (six repeats)
DNQ11_RS00510	PF06426	Serine acetyltransferase, N-terminal 
DNQ11_RS00515	PF09190	DALR domain
DNQ11_RS00515	PF01406	tRNA synthetases class I (C) catalytic domain
DNQ11_RS00520	PF00636	Ribonuclease III domain
DNQ11_RS00525	PF08032	RNA 2'-O ribose methyltransferase substrate binding
DNQ11_RS00525	PF00588	SpoU rRNA Methylase family
DNQ11_RS00530	PF05991	YacP-like NYN domain
DNQ11_RS00535	PF08281	Sigma-70, region 4
DNQ11_RS00535	PF04542	Sigma-70 region 2 
DNQ11_RS00540	PF00471	Ribosomal protein L33
DNQ11_RS00545	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
DNQ11_RS00550	PF00467	KOW motif
DNQ11_RS00550	PF02357	Transcription termination factor nusG
DNQ11_RS00555	PF00298	Ribosomal protein L11, RNA binding domain
DNQ11_RS00555	PF03946	Ribosomal protein L11, N-terminal domain
DNQ11_RS00560	PF00687	Ribosomal protein L1p/L10e family
DNQ11_RS00565	PF00466	Ribosomal protein L10
DNQ11_RS00570	PF16320	Ribosomal protein L7/L12 dimerisation domain
DNQ11_RS00570	PF00542	Ribosomal protein L7/L12 C-terminal domain
DNQ11_RS00575	PF05175	Methyltransferase small domain
DNQ11_RS00580	PF04561	RNA polymerase Rpb2, domain 2
DNQ11_RS00580	PF04565	RNA polymerase Rpb2, domain 3
DNQ11_RS00580	PF10385	RNA polymerase beta subunit external 1 domain
DNQ11_RS00580	PF00562	RNA polymerase Rpb2, domain 6
DNQ11_RS00580	PF04560	RNA polymerase Rpb2, domain 7
DNQ11_RS00580	PF04563	RNA polymerase beta subunit
DNQ11_RS00585	PF00623	RNA polymerase Rpb1, domain 2
DNQ11_RS00585	PF04998	RNA polymerase Rpb1, domain 5
DNQ11_RS00585	PF05000	RNA polymerase Rpb1, domain 4
DNQ11_RS00585	PF04997	RNA polymerase Rpb1, domain 1
DNQ11_RS00585	PF04983	RNA polymerase Rpb1, domain 3
DNQ11_RS00590	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
DNQ11_RS00595	PF00164	Ribosomal protein S12/S23
DNQ11_RS00600	PF00177	Ribosomal protein S7p/S5e
DNQ11_RS00605	PF00009	Elongation factor Tu GTP binding domain
DNQ11_RS00605	PF03144	Elongation factor Tu domain 2
DNQ11_RS00605	PF03764	Elongation factor G, domain IV
DNQ11_RS00605	PF14492	Elongation Factor G, domain II
DNQ11_RS00605	PF00679	Elongation factor G C-terminus
DNQ11_RS00610	PF00009	Elongation factor Tu GTP binding domain
DNQ11_RS00610	PF03144	Elongation factor Tu domain 2
DNQ11_RS00610	PF03143	Elongation factor Tu C-terminal domain
DNQ11_RS00615	PF00338	Ribosomal protein S10p/S20e
DNQ11_RS00620	PF00297	Ribosomal protein L3
DNQ11_RS00625	PF00573	Ribosomal protein L4/L1 family
DNQ11_RS00630	PF00276	Ribosomal protein L23
DNQ11_RS00635	PF03947	Ribosomal Proteins L2, C-terminal domain
DNQ11_RS00635	PF00181	Ribosomal Proteins L2, RNA binding domain
DNQ11_RS00640	PF00203	Ribosomal protein S19
DNQ11_RS00645	PF00237	Ribosomal protein L22p/L17e
DNQ11_RS00650	PF07650	KH domain
DNQ11_RS00650	PF00189	Ribosomal protein S3, C-terminal domain
DNQ11_RS00655	PF00252	Ribosomal protein L16p/L10e
DNQ11_RS00660	PF00831	Ribosomal L29 protein
DNQ11_RS00665	PF00366	Ribosomal protein S17
DNQ11_RS00670	PF00238	Ribosomal protein L14p/L23e
DNQ11_RS00675	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
DNQ11_RS00675	PF00467	KOW motif
DNQ11_RS00680	PF00673	ribosomal L5P family C-terminus
DNQ11_RS00680	PF00281	Ribosomal protein L5
DNQ11_RS00685	PF00253	Ribosomal protein S14p/S29e
DNQ11_RS00690	PF00410	Ribosomal protein S8
DNQ11_RS00695	PF00347	Ribosomal protein L6
DNQ11_RS00700	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
DNQ11_RS00705	PF03719	Ribosomal protein S5, C-terminal domain
DNQ11_RS00705	PF00333	Ribosomal protein S5, N-terminal domain
DNQ11_RS00710	PF00327	Ribosomal protein L30p/L7e
DNQ11_RS00715	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
DNQ11_RS00720	PF00344	SecY translocase
DNQ11_RS00725	PF05191	Adenylate kinase, active site lid
DNQ11_RS00730	PF00557	Metallopeptidase family M24
DNQ11_RS00735	PF01176	Translation initiation factor 1A / IF-1
DNQ11_RS00740	PF00444	Ribosomal protein L36
DNQ11_RS00745	PF00416	Ribosomal protein S13/S18
DNQ11_RS00750	PF00411	Ribosomal protein S11
DNQ11_RS00755	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
DNQ11_RS00755	PF01000	RNA polymerase Rpb3/RpoA insert domain
DNQ11_RS00755	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
DNQ11_RS00760	PF01196	Ribosomal protein L17
DNQ11_RS00765	PF00005	ABC transporter
DNQ11_RS00770	PF00005	ABC transporter
DNQ11_RS00775	PF02361	Cobalt transport protein
DNQ11_RS00780	PF01416	tRNA pseudouridine synthase
DNQ11_RS00785	PF00572	Ribosomal protein L13
DNQ11_RS00790	PF00380	Ribosomal protein S9/S16
DNQ11_RS00800	PF01520	N-acetylmuramoyl-L-alanine amidase
DNQ11_RS00805	PF10609	NUBPL iron-transfer P-loop NTPase
DNQ11_RS00810	PF17898	Spore germination GerD central core domain
DNQ11_RS00815	PF14089	KinB-signalling pathway activation in sporulation
DNQ11_RS00820	PF01522	Polysaccharide deacetylase
DNQ11_RS00900	PF00491	Arginase family
DNQ11_RS00905	PF02457	DisA bacterial checkpoint controller nucleotide-binding
DNQ11_RS00910	PF07949	YbbR-like protein
DNQ11_RS00915	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
DNQ11_RS00915	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
DNQ11_RS00915	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
DNQ11_RS00915	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
DNQ11_RS00925	PF01380	SIS domain
DNQ11_RS00930	PF00561	alpha/beta hydrolase fold
DNQ11_RS00935	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS00935	PF07729	FCD domain
DNQ11_RS00945	PF02447	GntP family permease
DNQ11_RS00950	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
DNQ11_RS00950	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
DNQ11_RS00960	PF07676	WD40-like Beta Propeller Repeat
DNQ11_RS00960	PF00326	Prolyl oligopeptidase family
DNQ11_RS00995	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS01000	PF00005	ABC transporter
DNQ11_RS01000	PF09383	NIL domain
DNQ11_RS01005	PF03180	NLPA lipoprotein
DNQ11_RS01010	PF00107	Zinc-binding dehydrogenase
DNQ11_RS01010	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS01020	PF01565	FAD binding domain 
DNQ11_RS01025	PF07690	Major Facilitator Superfamily
DNQ11_RS01035	PF07690	Major Facilitator Superfamily
DNQ11_RS01050	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS01055	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS01055	PF12911	N-terminal TM domain of oligopeptide transport permease C
DNQ11_RS01060	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS01060	PF00005	ABC transporter
DNQ11_RS01065	PF00005	ABC transporter
DNQ11_RS01065	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS01070	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS01080	PF12833	Helix-turn-helix domain
DNQ11_RS01095	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS01100	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS01105	PF00248	Aldo/keto reductase family
DNQ11_RS01110	PF14748	Pyrroline-5-carboxylate reductase dimerisation
DNQ11_RS01110	PF03807	NADP oxidoreductase coenzyme F420-dependent
DNQ11_RS01120	PF04973	Nicotinamide mononucleotide transporter
DNQ11_RS01125	PF06800	Sugar transport protein
DNQ11_RS01130	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS01140	PF12727	PBP superfamily domain
DNQ11_RS01140	PF12728	Helix-turn-helix domain
DNQ11_RS01155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS01155	PF03466	LysR substrate binding domain
DNQ11_RS01160	PF00892	EamA-like transporter family
DNQ11_RS01165	PF14142	YrzO-like protein
DNQ11_RS01175	PF01553	Acyltransferase
DNQ11_RS01190	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
DNQ11_RS01190	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS01200	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS01200	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS01215	PF01026	TatD related DNase
DNQ11_RS01220	PF10096	Uncharacterized protein conserved in bacteria (DUF2334)
DNQ11_RS01245	PF12848	ABC transporter
DNQ11_RS01245	PF00005	ABC transporter
DNQ11_RS01245	PF16326	ABC transporter C-terminal domain
DNQ11_RS01260	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS01265	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS01270	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS01270	PF12911	N-terminal TM domain of oligopeptide transport permease C
DNQ11_RS01275	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS01275	PF00005	ABC transporter
DNQ11_RS01280	PF00005	ABC transporter
DNQ11_RS01280	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS01320	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS01325	PF01557	Fumarylacetoacetate (FAA) hydrolase family
DNQ11_RS01340	PF07690	Major Facilitator Superfamily
DNQ11_RS01350	PF01225	Mur ligase family, catalytic domain
DNQ11_RS01350	PF08245	Mur ligase middle domain
DNQ11_RS01350	PF02875	Mur ligase family, glutamate ligase domain
DNQ11_RS01355	PF00270	DEAD/DEAH box helicase
DNQ11_RS01355	PF00271	Helicase conserved C-terminal domain
DNQ11_RS01360	PF03851	UV-endonuclease UvdE
DNQ11_RS01365	PF01694	Rhomboid family
DNQ11_RS01370	PF01648	4'-phosphopantetheinyl transferase superfamily
DNQ11_RS01380	PF00842	Alanine racemase, C-terminal domain
DNQ11_RS01380	PF01168	Alanine racemase, N-terminal domain
DNQ11_RS01385	PF01402	Ribbon-helix-helix protein, copG family
DNQ11_RS01390	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
DNQ11_RS01395	PF16921	Tex protein YqgF-like domain
DNQ11_RS01395	PF17674	HHH domain
DNQ11_RS01395	PF09371	Tex-like protein N-terminal domain
DNQ11_RS01395	PF00575	S1 RNA binding domain
DNQ11_RS01405	PF10263	SprT-like family
DNQ11_RS01405	PF17283	SprT-like zinc ribbon domain
DNQ11_RS01490	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
DNQ11_RS01495	PF00814	Glycoprotease family
DNQ11_RS01500	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS01505	PF00814	Glycoprotease family
DNQ11_RS01510	PF00005	ABC transporter
DNQ11_RS01510	PF12848	ABC transporter
DNQ11_RS01510	PF16326	ABC transporter C-terminal domain
DNQ11_RS01515	PF02629	CoA binding domain
DNQ11_RS01515	PF06971	Putative DNA-binding protein N-terminus
DNQ11_RS01525	PF02517	CPBP intramembrane metalloprotease
DNQ11_RS01530	PF00166	Chaperonin 10 Kd subunit
DNQ11_RS01535	PF00118	TCP-1/cpn60 chaperonin family
DNQ11_RS01540	PF02540	NAD synthase
DNQ11_RS01540	PF00117	Glutamine amidotransferase class-I
DNQ11_RS01540	PF00958	GMP synthase C terminal domain
DNQ11_RS01545	PF00860	Permease family
DNQ11_RS01550	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS01550	PF00072	Response regulator receiver domain
DNQ11_RS01555	PF00989	PAS fold
DNQ11_RS01555	PF16736	Single Cache-like 
DNQ11_RS01555	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS01555	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS01580	PF14307	Glycosyltransferase WbsX
DNQ11_RS01580	PF05045	Rhamnan synthesis protein F
DNQ11_RS01590	PF08241	Methyltransferase domain
DNQ11_RS01635	PF02673	Bacitracin resistance protein BacA
DNQ11_RS01645	PF00005	ABC transporter
DNQ11_RS01650	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS01650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS01655	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS01655	PF00072	Response regulator receiver domain
DNQ11_RS01680	PF00731	AIR carboxylase
DNQ11_RS01685	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
DNQ11_RS01685	PF02222	ATP-grasp domain
DNQ11_RS01690	PF00206	Lyase
DNQ11_RS01690	PF10397	Adenylosuccinate lyase C-terminus
DNQ11_RS01695	PF01259	SAICAR synthetase
DNQ11_RS01700	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
DNQ11_RS01710	PF02769	AIR synthase related protein, C-terminal domain
DNQ11_RS01710	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
DNQ11_RS01710	PF00586	AIR synthase related protein, N-terminal domain
DNQ11_RS01715	PF00156	Phosphoribosyl transferase domain
DNQ11_RS01720	PF02769	AIR synthase related protein, C-terminal domain
DNQ11_RS01720	PF00586	AIR synthase related protein, N-terminal domain
DNQ11_RS01725	PF00551	Formyl transferase
DNQ11_RS01730	PF02142	MGS-like domain
DNQ11_RS01730	PF01808	AICARFT/IMPCHase bienzyme
DNQ11_RS01735	PF02844	Phosphoribosylglycinamide synthetase, N domain
DNQ11_RS01735	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
DNQ11_RS01735	PF02843	Phosphoribosylglycinamide synthetase, C domain
DNQ11_RS01760	PF01884	PcrB family
DNQ11_RS01765	PF00580	UvrD/REP helicase N-terminal domain
DNQ11_RS01765	PF13361	UvrD-like helicase C-terminal domain
DNQ11_RS01770	PF12826	Helix-hairpin-helix motif
DNQ11_RS01770	PF00533	BRCA1 C Terminus (BRCT) domain
DNQ11_RS01770	PF01653	NAD-dependent DNA ligase adenylation domain
DNQ11_RS01770	PF03120	NAD-dependent DNA ligase OB-fold domain
DNQ11_RS01770	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
DNQ11_RS01775	PF07537	CamS sex pheromone cAM373 precursor
DNQ11_RS01780	PF01925	Sulfite exporter TauE/SafE
DNQ11_RS01785	PF00171	Aldehyde dehydrogenase family
DNQ11_RS01795	PF00857	Isochorismatase family
DNQ11_RS01805	PF00005	ABC transporter
DNQ11_RS01805	PF09383	NIL domain
DNQ11_RS01810	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS01815	PF03180	NLPA lipoprotein
DNQ11_RS01835	PF01047	MarR family
DNQ11_RS01845	PF02686	Glu-tRNAGln amidotransferase C subunit
DNQ11_RS01850	PF01425	Amidase
DNQ11_RS01855	PF02934	GatB/GatE catalytic domain
DNQ11_RS01855	PF02637	GatB domain
DNQ11_RS01860	PF00781	Diacylglycerol kinase catalytic domain
DNQ11_RS01865	PF13419	Haloacid dehalogenase-like hydrolase
DNQ11_RS01870	PF00202	Aminotransferase class-III
DNQ11_RS01875	PF00158	Sigma-54 interaction domain
DNQ11_RS01880	PF00171	Aldehyde dehydrogenase family
DNQ11_RS01885	PF00893	Small Multidrug Resistance protein
DNQ11_RS01890	PF02073	Thermophilic metalloprotease (M29)
DNQ11_RS01905	PF01773	Na+ dependent nucleoside transporter N-terminus
DNQ11_RS01905	PF07662	Na+ dependent nucleoside transporter C-terminus
DNQ11_RS01905	PF07670	Nucleoside recognition
DNQ11_RS01910	PF02475	Met-10+ like-protein
DNQ11_RS01910	PF01938	TRAM domain
DNQ11_RS01910	PF05958	tRNA (Uracil-5-)-methyltransferase
DNQ11_RS01915	PF01207	Dihydrouridine synthase (Dus)
DNQ11_RS01925	PF07308	Protein of unknown function (DUF1456)
DNQ11_RS01940	PF13378	Enolase C-terminal domain-like
DNQ11_RS01940	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
DNQ11_RS01950	PF03553	Na+/H+ antiporter family
DNQ11_RS01955	PF07687	Peptidase dimerisation domain
DNQ11_RS01955	PF01546	Peptidase family M20/M25/M40
DNQ11_RS01965	PF13192	Thioredoxin domain
DNQ11_RS01965	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS01970	PF00578	AhpC/TSA family
DNQ11_RS01975	PF01636	Phosphotransferase enzyme family
DNQ11_RS01980	PF01008	Initiation factor 2 subunit family
DNQ11_RS01985	PF00596	Class II Aldolase and Adducin N-terminal domain
DNQ11_RS01990	PF01032	FecCD transport family
DNQ11_RS01995	PF01032	FecCD transport family
DNQ11_RS02000	PF01497	Periplasmic binding protein
DNQ11_RS02010	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS02025	PF12728	Helix-turn-helix domain
DNQ11_RS02070	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS02070	PF00989	PAS fold
DNQ11_RS02070	PF13188	PAS domain
DNQ11_RS02070	PF13426	PAS domain
DNQ11_RS02070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS02090	PF10127	RNA repair pathway DNA polymerase beta family
DNQ11_RS02095	PF07690	Major Facilitator Superfamily
DNQ11_RS02100	PF00355	Rieske [2Fe-2S] domain
DNQ11_RS02100	PF01266	FAD dependent oxidoreductase
DNQ11_RS02110	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS02115	PF00497	Bacterial extracellular solute-binding proteins, family 3
DNQ11_RS02120	PF00005	ABC transporter
DNQ11_RS02130	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS02130	PF00672	HAMP domain
DNQ11_RS02130	PF12729	Four helix bundle sensory module for signal transduction
DNQ11_RS02135	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS02135	PF12729	Four helix bundle sensory module for signal transduction
DNQ11_RS02135	PF00672	HAMP domain
DNQ11_RS02140	PF00128	Alpha amylase, catalytic domain
DNQ11_RS02140	PF16657	Maltogenic Amylase, C-terminal domain
DNQ11_RS02145	PF02378	Phosphotransferase system, EIIC 
DNQ11_RS02145	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DNQ11_RS02145	PF00367	phosphotransferase system, EIIB
DNQ11_RS02150	PF03372	Endonuclease/Exonuclease/phosphatase family
DNQ11_RS02155	PF01061	ABC-2 type transporter
DNQ11_RS02160	PF01751	Toprim domain
DNQ11_RS02160	PF01131	DNA topoisomerase
DNQ11_RS02165	PF02110	Hydroxyethylthiazole kinase family
DNQ11_RS02170	PF02581	Thiamine monophosphate synthase
DNQ11_RS02175	PF03605	Anaerobic c4-dicarboxylate membrane transporter
DNQ11_RS02180	PF00672	HAMP domain
DNQ11_RS02180	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS02185	PF01910	Thiamine-binding protein
DNQ11_RS02190	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS02200	PF00005	ABC transporter
DNQ11_RS02205	PF12848	ABC transporter
DNQ11_RS02205	PF00005	ABC transporter
DNQ11_RS02210	PF00041	Fibronectin type III domain
DNQ11_RS02210	PF00704	Glycosyl hydrolases family 18
DNQ11_RS02230	PF08360	QacR-like protein, C-terminal region
DNQ11_RS02230	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS02250	PF11700	Vacuole effluxer Atg22 like
DNQ11_RS02265	PF09180	Prolyl-tRNA synthetase, C-terminal
DNQ11_RS02265	PF03129	Anticodon binding domain
DNQ11_RS02265	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
DNQ11_RS02275	PF00480	ROK family
DNQ11_RS02280	PF02342	TerD domain
DNQ11_RS02285	PF02342	TerD domain
DNQ11_RS02290	PF02342	TerD domain
DNQ11_RS02295	PF03741	Integral membrane protein TerC family
DNQ11_RS02300	PF14266	Putative component of 'biosynthetic module'
DNQ11_RS02305	PF05816	Toxic anion resistance protein (TelA)
DNQ11_RS02310	PF00689	Cation transporting ATPase, C-terminus
DNQ11_RS02310	PF00690	Cation transporter/ATPase, N-terminus
DNQ11_RS02315	PF06569	Protein of unknown function (DUF1128)
DNQ11_RS02320	PF01451	Low molecular weight phosphotyrosine protein phosphatase
DNQ11_RS02330	PF03631	Virulence factor BrkB
DNQ11_RS02345	PF00892	EamA-like transporter family
DNQ11_RS02365	PF09335	SNARE associated Golgi protein
DNQ11_RS02380	PF16242	Pyridoxamine 5'-phosphate oxidase like
DNQ11_RS02385	PF01699	Sodium/calcium exchanger protein
DNQ11_RS02390	PF14167	YfkD-like protein
DNQ11_RS02395	PF04055	Radical SAM superfamily
DNQ11_RS02395	PF08756	YfkB-like domain
DNQ11_RS02405	PF05683	Fumarase C-terminus
DNQ11_RS02405	PF05681	Fumarate hydratase (Fumerase)
DNQ11_RS02410	PF01522	Polysaccharide deacetylase
DNQ11_RS02420	PF00730	HhH-GPD superfamily base excision DNA repair protein
DNQ11_RS02425	PF01938	TRAM domain
DNQ11_RS02425	PF05958	tRNA (Uracil-5-)-methyltransferase
DNQ11_RS02430	PF00589	Phage integrase family
DNQ11_RS02430	PF14659	Phage integrase, N-terminal SAM-like domain
DNQ11_RS02435	PF01381	Helix-turn-helix
DNQ11_RS02455	PF01381	Helix-turn-helix
DNQ11_RS02490	PF07319	Primosomal protein DnaI N-terminus
DNQ11_RS02490	PF01695	IstB-like ATP binding protein
DNQ11_RS02595	PF00589	Phage integrase family
DNQ11_RS02600	PF00589	Phage integrase family
DNQ11_RS02735	PF01183	Glycosyl hydrolases family 25
DNQ11_RS02745	PF01416	tRNA pseudouridine synthase
DNQ11_RS02755	PF02954	Bacterial regulatory protein, Fis family
DNQ11_RS02755	PF13426	PAS domain
DNQ11_RS02755	PF00158	Sigma-54 interaction domain
DNQ11_RS02765	PF00324	Amino acid permease
DNQ11_RS02770	PF07687	Peptidase dimerisation domain
DNQ11_RS02770	PF01546	Peptidase family M20/M25/M40
DNQ11_RS02800	PF04960	Glutaminase
DNQ11_RS02810	PF00367	phosphotransferase system, EIIB
DNQ11_RS02810	PF02378	Phosphotransferase system, EIIC 
DNQ11_RS02815	PF00144	Beta-lactamase
DNQ11_RS02830	PF00535	Glycosyl transferase family 2
DNQ11_RS02835	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
DNQ11_RS02835	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
DNQ11_RS02835	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
DNQ11_RS02840	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
DNQ11_RS02840	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
DNQ11_RS02840	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
DNQ11_RS02845	PF01370	NAD dependent epimerase/dehydratase family
DNQ11_RS02845	PF02911	Formyl transferase, C-terminal domain
DNQ11_RS02845	PF00551	Formyl transferase
DNQ11_RS02850	PF00535	Glycosyl transferase family 2
DNQ11_RS02860	PF01228	Glycine radical
DNQ11_RS02860	PF02901	Pyruvate formate lyase-like
DNQ11_RS02865	PF04055	Radical SAM superfamily
DNQ11_RS02870	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase
DNQ11_RS02870	PF04101	Glycosyltransferase family 28 C-terminal domain
DNQ11_RS02885	PF01979	Amidohydrolase family
DNQ11_RS02890	PF08338	Domain of unknown function (DUF1731)
DNQ11_RS02890	PF01370	NAD dependent epimerase/dehydratase family
DNQ11_RS02895	PF02631	RecX family
DNQ11_RS02910	PF08176	Small acid-soluble spore protein K family
DNQ11_RS02915	PF14043	WVELL protein
DNQ11_RS02920	PF04307	LexA-binding, inner membrane-associated putative hydrolase
DNQ11_RS02925	PF14815	NUDIX domain
DNQ11_RS02925	PF00730	HhH-GPD superfamily base excision DNA repair protein
DNQ11_RS02935	PF04259	Small, acid-soluble spore protein, gamma-type 
DNQ11_RS02940	PF14182	YgaB-like protein
DNQ11_RS02945	PF04167	Protein of unknown function (DUF402)
DNQ11_RS02950	PF00664	ABC transporter transmembrane region
DNQ11_RS02950	PF00005	ABC transporter
DNQ11_RS02955	PF06081	Aromatic acid exporter family member 1
DNQ11_RS02960	PF01493	GXGXG motif
DNQ11_RS02960	PF01645	Conserved region in glutamate synthase
DNQ11_RS02960	PF00310	Glutamine amidotransferases class-II
DNQ11_RS02960	PF04898	Glutamate synthase central domain
DNQ11_RS02965	PF00202	Aminotransferase class-III
DNQ11_RS02970	PF00005	ABC transporter
DNQ11_RS02985	PF07885	Ion channel
DNQ11_RS02990	PF00578	AhpC/TSA family
DNQ11_RS02995	PF01475	Ferric uptake regulator family
DNQ11_RS03000	PF11023	Zinc-ribbon containing domain
DNQ11_RS03105	PF01709	Transcriptional regulator
DNQ11_RS03110	PF13344	Haloacid dehalogenase-like hydrolase
DNQ11_RS03110	PF00293	NUDIX domain
DNQ11_RS03115	PF00912	Transglycosylase
DNQ11_RS03115	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS03120	PF13462	Thioredoxin
DNQ11_RS03130	PF08331	Domain of unknown function (DUF1730)
DNQ11_RS03135	PF12671	Putative amidase domain
DNQ11_RS03140	PF00588	SpoU rRNA Methylase family
DNQ11_RS03145	PF03707	Bacterial signalling protein N terminal repeat
DNQ11_RS03145	PF00990	Diguanylate cyclase, GGDEF domain
DNQ11_RS03145	PF00563	EAL domain
DNQ11_RS03155	PF06798	PrkA serine protein kinase C-terminal domain
DNQ11_RS03155	PF08298	PrkA AAA domain
DNQ11_RS03170	PF04285	Protein of unknown function (DUF444)
DNQ11_RS03185	PF02028	BCCT, betaine/carnitine/choline family transporter
DNQ11_RS03190	PF18496	Collagenase G catalytic helper subdomain
DNQ11_RS03190	PF01752	Collagenase
DNQ11_RS03190	PF08453	Peptidase family M9 N-terminal
DNQ11_RS03200	PF15975	Flotillin
DNQ11_RS03200	PF01145	SPFH domain / Band 7 family
DNQ11_RS03205	PF02743	Cache domain
DNQ11_RS03205	PF00672	HAMP domain
DNQ11_RS03205	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS03210	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS03210	PF00989	PAS fold
DNQ11_RS03210	PF17203	Single cache domain 3
DNQ11_RS03210	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
DNQ11_RS03215	PF08279	HTH domain
DNQ11_RS03215	PF12431	Transcriptional regulator 
DNQ11_RS03215	PF00072	Response regulator receiver domain
DNQ11_RS03220	PF03600	Citrate transporter
DNQ11_RS03245	PF04309	Glycerol-3-phosphate responsive antiterminator
DNQ11_RS03250	PF00005	ABC transporter
DNQ11_RS03250	PF17912	MalK OB fold domain
DNQ11_RS03255	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS03260	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS03265	PF13416	Bacterial extracellular solute-binding protein
DNQ11_RS03270	PF00149	Calcineurin-like phosphoesterase
DNQ11_RS03275	PF00072	Response regulator receiver domain
DNQ11_RS03275	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS03280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS03280	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS03290	PF13529	Peptidase_C39 like family
DNQ11_RS03295	PF02743	Cache domain
DNQ11_RS03295	PF00672	HAMP domain
DNQ11_RS03295	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS03300	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
DNQ11_RS03300	PF17203	Single cache domain 3
DNQ11_RS03300	PF00989	PAS fold
DNQ11_RS03300	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS03305	PF00072	Response regulator receiver domain
DNQ11_RS03310	PF03390	2-hydroxycarboxylate transporter family
DNQ11_RS03315	PF03949	Malic enzyme, NAD binding domain
DNQ11_RS03315	PF00390	Malic enzyme, N-terminal domain
DNQ11_RS03325	PF00892	EamA-like transporter family
DNQ11_RS03330	PF00155	Aminotransferase class I and II
DNQ11_RS03330	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS03340	PF00672	HAMP domain
DNQ11_RS03340	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS03340	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS03340	PF18698	Histidine kinase sensor domain
DNQ11_RS03340	PF00989	PAS fold
DNQ11_RS03345	PF00072	Response regulator receiver domain
DNQ11_RS03345	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS03355	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS03355	PF13508	Acetyltransferase (GNAT) domain
DNQ11_RS03360	PF02634	FdhD/NarQ family
DNQ11_RS03365	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
DNQ11_RS03365	PF01568	Molydopterin dinucleotide binding domain
DNQ11_RS03365	PF00037	4Fe-4S binding domain
DNQ11_RS03365	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
DNQ11_RS03365	PF00384	Molybdopterin oxidoreductase
DNQ11_RS03370	PF07849	Protein of unknown function (DUF1641)
DNQ11_RS03380	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
DNQ11_RS03380	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
DNQ11_RS03385	PF13520	Amino acid permease
DNQ11_RS03395	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS03400	PF00403	Heavy-metal-associated domain
DNQ11_RS03405	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
DNQ11_RS03405	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
DNQ11_RS03405	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
DNQ11_RS03420	PF02868	Thermolysin metallopeptidase, alpha-helical domain
DNQ11_RS03420	PF07504	Fungalysin/Thermolysin Propeptide Motif
DNQ11_RS03420	PF01447	Thermolysin metallopeptidase, catalytic domain
DNQ11_RS03420	PF03413	Peptidase propeptide and YPEB domain
DNQ11_RS03440	PF04294	VanW like protein
DNQ11_RS03445	PF03816	Cell envelope-related transcriptional attenuator domain
DNQ11_RS03450	PF07662	Na+ dependent nucleoside transporter C-terminus
DNQ11_RS03450	PF01773	Na+ dependent nucleoside transporter N-terminus
DNQ11_RS03455	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS03460	PF01595	Cyclin M transmembrane N-terminal domain
DNQ11_RS03460	PF03471	Transporter associated domain
DNQ11_RS03460	PF00571	CBS domain
DNQ11_RS03465	PF10415	Fumarase C C-terminus
DNQ11_RS03465	PF00206	Lyase
DNQ11_RS03470	PF02652	L-lactate permease
DNQ11_RS03475	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS03480	PF08141	Small acid-soluble spore protein H family
DNQ11_RS03485	PF00854	POT family
DNQ11_RS03490	PF01497	Periplasmic binding protein
DNQ11_RS03495	PF01032	FecCD transport family
DNQ11_RS03500	PF01032	FecCD transport family
DNQ11_RS03505	PF00005	ABC transporter
DNQ11_RS03510	PF08241	Methyltransferase domain
DNQ11_RS03515	PF00155	Aminotransferase class I and II
DNQ11_RS03520	PF01370	NAD dependent epimerase/dehydratase family
DNQ11_RS03525	PF00293	NUDIX domain
DNQ11_RS03525	PF13344	Haloacid dehalogenase-like hydrolase
DNQ11_RS03530	PF00092	von Willebrand factor type A domain
DNQ11_RS03535	PF07728	AAA domain (dynein-related subfamily)
DNQ11_RS03540	PF13091	PLD-like domain
DNQ11_RS03540	PF13396	Phospholipase_D-nuclease N-terminal
DNQ11_RS03555	PF00563	EAL domain
DNQ11_RS03555	PF00990	Diguanylate cyclase, GGDEF domain
DNQ11_RS03555	PF03707	Bacterial signalling protein N terminal repeat
DNQ11_RS03560	PF13520	Amino acid permease
DNQ11_RS03565	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS03565	PF07702	UTRA domain
DNQ11_RS03570	PF02378	Phosphotransferase system, EIIC 
DNQ11_RS03570	PF00367	phosphotransferase system, EIIB
DNQ11_RS03575	PF00128	Alpha amylase, catalytic domain
DNQ11_RS03575	PF16657	Maltogenic Amylase, C-terminal domain
DNQ11_RS03590	PF03323	Bacillus/Clostridium GerA spore germination protein
DNQ11_RS03600	PF01636	Phosphotransferase enzyme family
DNQ11_RS03605	PF01235	Sodium:alanine symporter family
DNQ11_RS03610	PF00005	ABC transporter
DNQ11_RS03615	PF00497	Bacterial extracellular solute-binding proteins, family 3
DNQ11_RS03620	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS03625	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS03630	PF00324	Amino acid permease
DNQ11_RS03655	PF13280	WYL domain
DNQ11_RS03655	PF08279	HTH domain
DNQ11_RS03660	PF01872	RibD C-terminal domain
DNQ11_RS03665	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS03665	PF18698	Histidine kinase sensor domain
DNQ11_RS03665	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS03665	PF00989	PAS fold
DNQ11_RS03665	PF00672	HAMP domain
DNQ11_RS03670	PF00072	Response regulator receiver domain
DNQ11_RS03670	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS03680	PF01740	STAS domain
DNQ11_RS03680	PF00916	Sulfate permease family
DNQ11_RS03685	PF00582	Universal stress protein family
DNQ11_RS03695	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS03700	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS03705	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS03710	PF00005	ABC transporter
DNQ11_RS03710	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS03715	PF00005	ABC transporter
DNQ11_RS03715	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS03720	PF07690	Major Facilitator Superfamily
DNQ11_RS03725	PF01047	MarR family
DNQ11_RS03735	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS03740	PF00294	pfkB family carbohydrate kinase
DNQ11_RS03745	PF05025	RbsD / FucU transport protein family
DNQ11_RS03750	PF00005	ABC transporter
DNQ11_RS03755	PF02653	Branched-chain amino acid transport system / permease component
DNQ11_RS03760	PF13407	Periplasmic binding protein domain
DNQ11_RS03765	PF00923	Transaldolase/Fructose-6-phosphate aldolase
DNQ11_RS03770	PF05547	Immune inhibitor A peptidase M6
DNQ11_RS03785	PF00107	Zinc-binding dehydrogenase
DNQ11_RS03785	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS03795	PF00882	Zinc dependent phospholipase C
DNQ11_RS03800	PF03372	Endonuclease/Exonuclease/phosphatase family
DNQ11_RS03825	PF02673	Bacitracin resistance protein BacA
DNQ11_RS03830	PF02743	Cache domain
DNQ11_RS03830	PF00672	HAMP domain
DNQ11_RS03830	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS03835	PF06725	3D domain
DNQ11_RS03835	PF01476	LysM domain
DNQ11_RS03840	PF01381	Helix-turn-helix
DNQ11_RS03850	PF04203	Sortase domain
DNQ11_RS03855	PF00854	POT family
DNQ11_RS03860	PF05525	Branched-chain amino acid transport protein
DNQ11_RS03875	PF00324	Amino acid permease
DNQ11_RS03880	PF00860	Permease family
DNQ11_RS03905	PF02254	TrkA-N domain
DNQ11_RS03905	PF00999	Sodium/hydrogen exchanger family
DNQ11_RS03905	PF02080	TrkA-C domain
DNQ11_RS03915	PF00510	Cytochrome c oxidase subunit III
DNQ11_RS03920	PF00115	Cytochrome C and Quinol oxidase polypeptide I
DNQ11_RS03925	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
DNQ11_RS03930	PF00324	Amino acid permease
DNQ11_RS03935	PF13529	Peptidase_C39 like family
DNQ11_RS03940	PF07687	Peptidase dimerisation domain
DNQ11_RS03940	PF01546	Peptidase family M20/M25/M40
DNQ11_RS03945	PF11755	Protein of unknown function (DUF3311)
DNQ11_RS03950	PF00474	Sodium:solute symporter family
DNQ11_RS03955	PF03323	Bacillus/Clostridium GerA spore germination protein
DNQ11_RS03960	PF03845	Spore germination protein
DNQ11_RS03965	PF05504	Spore germination B3/ GerAC like, C-terminal 
DNQ11_RS03975	PF17910	FeoB cytosolic helical domain
DNQ11_RS03975	PF07664	Ferrous iron transport protein B C terminus
DNQ11_RS03975	PF02421	Ferrous iron transport protein B
DNQ11_RS03975	PF07670	Nucleoside recognition
DNQ11_RS03980	PF02421	Ferrous iron transport protein B
DNQ11_RS03980	PF07664	Ferrous iron transport protein B C terminus
DNQ11_RS03980	PF17910	FeoB cytosolic helical domain
DNQ11_RS03980	PF07670	Nucleoside recognition
DNQ11_RS03985	PF07670	Nucleoside recognition
DNQ11_RS03985	PF17910	FeoB cytosolic helical domain
DNQ11_RS03985	PF07664	Ferrous iron transport protein B C terminus
DNQ11_RS03985	PF04023	FeoA domain
DNQ11_RS03985	PF02421	Ferrous iron transport protein B
DNQ11_RS03990	PF12849	PBP superfamily domain
DNQ11_RS03995	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS04000	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS04010	PF00873	AcrB/AcrD/AcrF family
DNQ11_RS04130	PF00571	CBS domain
DNQ11_RS04150	PF00246	Zinc carboxypeptidase
DNQ11_RS04150	PF08239	Bacterial SH3 domain
DNQ11_RS04155	PF03070	TENA/THI-4/PQQC family
DNQ11_RS04160	PF00005	ABC transporter
DNQ11_RS04165	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS04170	PF09084	NMT1/THI5 like
DNQ11_RS04175	PF02581	Thiamine monophosphate synthase
DNQ11_RS04180	PF01266	FAD dependent oxidoreductase
DNQ11_RS04185	PF02597	ThiS family
DNQ11_RS04190	PF05690	Thiazole biosynthesis protein ThiG
DNQ11_RS04195	PF00899	ThiF family
DNQ11_RS04200	PF08543	Phosphomethylpyrimidine kinase
DNQ11_RS04230	PF03814	Potassium-transporting ATPase A subunit
DNQ11_RS04240	PF02669	K+-transporting ATPase, c chain
DNQ11_RS04245	PF02702	Osmosensitive K+ channel His kinase sensor domain
DNQ11_RS04250	PF07690	Major Facilitator Superfamily
DNQ11_RS04255	PF01047	MarR family
DNQ11_RS04270	PF00860	Permease family
DNQ11_RS04290	PF00294	pfkB family carbohydrate kinase
DNQ11_RS04295	PF00251	Glycosyl hydrolases family 32 N-terminal domain
DNQ11_RS04295	PF08244	Glycosyl hydrolases family 32 C terminal
DNQ11_RS04300	PF00367	phosphotransferase system, EIIB
DNQ11_RS04300	PF02378	Phosphotransferase system, EIIC 
DNQ11_RS04305	PF13407	Periplasmic binding protein domain
DNQ11_RS04305	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS04315	PF00085	Thioredoxin
DNQ11_RS04320	PF02600	Disulfide bond formation protein DsbB
DNQ11_RS04325	PF14148	YhdB-like protein
DNQ11_RS04345	PF03323	Bacillus/Clostridium GerA spore germination protein
DNQ11_RS04360	PF00881	Nitroreductase family
DNQ11_RS04365	PF04293	SpoVR like protein
DNQ11_RS04395	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS04395	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
DNQ11_RS04400	PF02583	Metal-sensitive transcriptional repressor
DNQ11_RS04405	PF00581	Rhodanese-like domain
DNQ11_RS04405	PF01206	Sulfurtransferase TusA
DNQ11_RS04410	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS04410	PF00581	Rhodanese-like domain
DNQ11_RS04415	PF01206	Sulfurtransferase TusA
DNQ11_RS04420	PF00581	Rhodanese-like domain
DNQ11_RS04430	PF13686	DsrE/DsrF/DrsH-like family
DNQ11_RS04435	PF01925	Sulfite exporter TauE/SafE
DNQ11_RS04445	PF03816	Cell envelope-related transcriptional attenuator domain
DNQ11_RS04450	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS04450	PF00107	Zinc-binding dehydrogenase
DNQ11_RS04455	PF02690	Na+/Pi-cotransporter
DNQ11_RS04460	PF07690	Major Facilitator Superfamily
DNQ11_RS04470	PF05043	Mga helix-turn-helix domain
DNQ11_RS04470	PF00874	PRD domain
DNQ11_RS04470	PF08279	HTH domain
DNQ11_RS04470	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DNQ11_RS04475	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
DNQ11_RS04480	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
DNQ11_RS04485	PF02378	Phosphotransferase system, EIIC 
DNQ11_RS04500	PF06725	3D domain
DNQ11_RS04500	PF01476	LysM domain
DNQ11_RS04505	PF12704	MacB-like periplasmic core domain
DNQ11_RS04505	PF02687	FtsX-like permease family
DNQ11_RS04510	PF00005	ABC transporter
DNQ11_RS04520	PF09529	Integral membrane protein (intg_mem_TP0381)
DNQ11_RS04535	PF05525	Branched-chain amino acid transport protein
DNQ11_RS04540	PF05067	Manganese containing catalase
DNQ11_RS04545	PF12652	CotJB protein
DNQ11_RS04550	PF11007	Spore coat associated protein JA (CotJA)
DNQ11_RS04565	PF02735	Ku70/Ku80 beta-barrel domain
DNQ11_RS04575	PF09335	SNARE associated Golgi protein
DNQ11_RS04615	PF13520	Amino acid permease
DNQ11_RS04620	PF00999	Sodium/hydrogen exchanger family
DNQ11_RS04630	PF01380	SIS domain
DNQ11_RS04630	PF01418	Helix-turn-helix domain, rpiR family
DNQ11_RS04635	PF01380	SIS domain
DNQ11_RS04640	PF00367	phosphotransferase system, EIIB
DNQ11_RS04640	PF02378	Phosphotransferase system, EIIC 
DNQ11_RS04650	PF07681	DoxX
DNQ11_RS04665	PF00892	EamA-like transporter family
DNQ11_RS04670	PF01037	Lrp/AsnC ligand binding domain
DNQ11_RS04680	PF00893	Small Multidrug Resistance protein
DNQ11_RS04685	PF00893	Small Multidrug Resistance protein
DNQ11_RS04690	PF17934	Tetracyclin repressor-like, C-terminal domain
DNQ11_RS04690	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS04695	PF07690	Major Facilitator Superfamily
DNQ11_RS04700	PF01638	HxlR-like helix-turn-helix
DNQ11_RS04710	PF02525	Flavodoxin-like fold
DNQ11_RS04715	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS04715	PF12793	Sugar transport-related sRNA regulator N-term
DNQ11_RS04720	PF07690	Major Facilitator Superfamily
DNQ11_RS04730	PF01965	DJ-1/PfpI family
DNQ11_RS04735	PF18011	C-terminal domain found in long catalases
DNQ11_RS04735	PF06628	Catalase-related immune-responsive
DNQ11_RS04735	PF00199	Catalase
DNQ11_RS04745	PF13520	Amino acid permease
DNQ11_RS04750	PF01177	Asp/Glu/Hydantoin racemase
DNQ11_RS04760	PF00171	Aldehyde dehydrogenase family
DNQ11_RS04780	PF00664	ABC transporter transmembrane region
DNQ11_RS04780	PF00005	ABC transporter
DNQ11_RS04795	PF00497	Bacterial extracellular solute-binding proteins, family 3
DNQ11_RS04800	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS04805	PF00005	ABC transporter
DNQ11_RS04810	PF00269	Small, acid-soluble spore proteins, alpha/beta type
DNQ11_RS04820	PF14398	YheC/D like ATP-grasp
DNQ11_RS04830	PF04286	Protein of unknown function (DUF445)
DNQ11_RS04835	PF06133	Control of competence regulator ComK, YlbF/YmcA
DNQ11_RS04850	PF00205	Thiamine pyrophosphate enzyme, central domain
DNQ11_RS04850	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
DNQ11_RS04850	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
DNQ11_RS04855	PF03306	Alpha-acetolactate decarboxylase
DNQ11_RS04865	PF02245	Methylpurine-DNA glycosylase (MPG)
DNQ11_RS04880	PF01476	LysM domain
DNQ11_RS04880	PF01471	Putative peptidoglycan binding domain
DNQ11_RS04880	PF01510	N-acetylmuramoyl-L-alanine amidase
DNQ11_RS04890	PF04055	Radical SAM superfamily
DNQ11_RS04895	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS04895	PF00501	AMP-binding enzyme
DNQ11_RS04905	PF00916	Sulfate permease family
DNQ11_RS04905	PF01740	STAS domain
DNQ11_RS04925	PF07516	SecA Wing and Scaffold domain
DNQ11_RS04925	PF01043	SecA preprotein cross-linking domain
DNQ11_RS04925	PF07517	SecA DEAD-like domain
DNQ11_RS04930	PF01943	Polysaccharide biosynthesis protein
DNQ11_RS04930	PF14667	Polysaccharide biosynthesis C-terminal domain
DNQ11_RS04940	PF00395	S-layer homology domain
DNQ11_RS04940	PF13205	Bacterial Ig-like domain
DNQ11_RS04940	PF02368	Bacterial Ig-like domain (group 2)
DNQ11_RS04945	PF00395	S-layer homology domain
DNQ11_RS04955	PF03062	MBOAT, membrane-bound O-acyltransferase family
DNQ11_RS04960	PF03062	MBOAT, membrane-bound O-acyltransferase family
DNQ11_RS04980	PF00378	Enoyl-CoA hydratase/isomerase
DNQ11_RS05000	PF05343	M42 glutamyl aminopeptidase
DNQ11_RS05005	PF01520	N-acetylmuramoyl-L-alanine amidase
DNQ11_RS05005	PF00395	S-layer homology domain
DNQ11_RS05015	PF11121	Protein of unknown function (DUF2639)
DNQ11_RS05020	PF05544	Proline racemase
DNQ11_RS05025	PF02423	Ornithine cyclodeaminase/mu-crystallin family
DNQ11_RS05030	PF18593	CdiI immunity protein
DNQ11_RS05050	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS05055	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS05060	PF12911	N-terminal TM domain of oligopeptide transport permease C
DNQ11_RS05060	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS05070	PF00005	ABC transporter
DNQ11_RS05070	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS05080	PF01541	GIY-YIG catalytic domain
DNQ11_RS05115	PF00083	Sugar (and other) transporter
DNQ11_RS05120	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS05120	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
DNQ11_RS05125	PF00072	Response regulator receiver domain
DNQ11_RS05125	PF08279	HTH domain
DNQ11_RS05125	PF12431	Transcriptional regulator 
DNQ11_RS05130	PF03401	Tripartite tricarboxylate transporter family receptor
DNQ11_RS05135	PF02342	TerD domain
DNQ11_RS05160	PF13411	MerR HTH family regulatory protein
DNQ11_RS05160	PF06445	GyrI-like small molecule binding domain
DNQ11_RS05175	PF00772	DnaB-like helicase N terminal domain
DNQ11_RS05175	PF03796	DnaB-like helicase C terminal domain
DNQ11_RS05205	PF01925	Sulfite exporter TauE/SafE
DNQ11_RS05225	PF07690	Major Facilitator Superfamily
DNQ11_RS05280	PF18665	Tetracyclin repressor-like, C-terminal domain
DNQ11_RS05280	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS05300	PF01066	CDP-alcohol phosphatidyltransferase
DNQ11_RS05325	PF02733	Dak1 domain
DNQ11_RS05340	PF02733	Dak1 domain
DNQ11_RS05345	PF02525	Flavodoxin-like fold
DNQ11_RS05350	PF02082	Transcriptional regulator
DNQ11_RS05385	PF01966	HD domain
DNQ11_RS05385	PF00672	HAMP domain
DNQ11_RS05420	PF00395	S-layer homology domain
DNQ11_RS05445	PF11181	Heat induced stress protein YflT
DNQ11_RS05450	PF05532	CsbD-like
DNQ11_RS05465	PF01740	STAS domain
DNQ11_RS05470	PF13581	Histidine kinase-like ATPase domain
DNQ11_RS05475	PF04542	Sigma-70 region 2 
DNQ11_RS05475	PF04539	Sigma-70 region 3
DNQ11_RS05475	PF04545	Sigma-70, region 4
DNQ11_RS05485	PF13426	PAS domain
DNQ11_RS05485	PF07228	Stage II sporulation protein E (SpoIIE)
DNQ11_RS05490	PF01739	CheR methyltransferase, SAM binding domain
DNQ11_RS05490	PF03705	CheR methyltransferase, all-alpha domain
DNQ11_RS05495	PF00072	Response regulator receiver domain
DNQ11_RS05495	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS05495	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS05495	PF01627	Hpt domain
DNQ11_RS05495	PF00497	Bacterial extracellular solute-binding proteins, family 3
DNQ11_RS05520	PF01906	Putative heavy-metal-binding
DNQ11_RS05535	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS05535	PF00107	Zinc-binding dehydrogenase
DNQ11_RS05540	PF11121	Protein of unknown function (DUF2639)
DNQ11_RS05555	PF00149	Calcineurin-like phosphoesterase
DNQ11_RS05560	PF13514	AAA domain
DNQ11_RS05575	PF01966	HD domain
DNQ11_RS05575	PF01336	OB-fold nucleic acid binding domain
DNQ11_RS05580	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS05585	PF07690	Major Facilitator Superfamily
DNQ11_RS05590	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS05600	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS05605	PF18801	response regulator aspartate phosphatase H, N terminal
DNQ11_RS05615	PF08386	TAP-like protein
DNQ11_RS05615	PF00561	alpha/beta hydrolase fold
DNQ11_RS05635	PF04309	Glycerol-3-phosphate responsive antiterminator
DNQ11_RS05640	PF00230	Major intrinsic protein
DNQ11_RS05645	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
DNQ11_RS05645	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
DNQ11_RS05650	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
DNQ11_RS05650	PF01266	FAD dependent oxidoreductase
DNQ11_RS05670	PF04542	Sigma-70 region 2 
DNQ11_RS05670	PF08281	Sigma-70, region 4
DNQ11_RS05695	PF07690	Major Facilitator Superfamily
DNQ11_RS05700	PF07690	Major Facilitator Superfamily
DNQ11_RS05710	PF13538	UvrD-like helicase C-terminal domain
DNQ11_RS05735	PF01047	MarR family
DNQ11_RS05740	PF12732	YtxH-like protein
DNQ11_RS05745	PF01230	HIT domain
DNQ11_RS05755	PF00005	ABC transporter
DNQ11_RS05760	PF05975	Bacterial ABC transporter protein EcsB
DNQ11_RS05765	PF12787	EcsC protein family
DNQ11_RS05775	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS05775	PF17934	Tetracyclin repressor-like, C-terminal domain
DNQ11_RS05785	PF03703	Bacterial PH domain
DNQ11_RS05835	PF03703	Bacterial PH domain
DNQ11_RS05840	PF03703	Bacterial PH domain
DNQ11_RS05845	PF03992	Antibiotic biosynthesis monooxygenase
DNQ11_RS05850	PF00912	Transglycosylase
DNQ11_RS05850	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS05855	PF01208	Uroporphyrinogen decarboxylase (URO-D)
DNQ11_RS05860	PF00762	Ferrochelatase
DNQ11_RS05865	PF01593	Flavin containing amine oxidoreductase
DNQ11_RS05890	PF03965	Penicillinase repressor
DNQ11_RS05900	PF17932	Tetracyclin repressor-like, C-terminal domain
DNQ11_RS05900	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS05930	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS05935	PF14149	YhfH-like protein
DNQ11_RS05940	PF12706	Beta-lactamase superfamily domain
DNQ11_RS05945	PF10437	Bacterial lipoate protein ligase C-terminus
DNQ11_RS05945	PF03099	Biotin/lipoate A/B protein ligase family
DNQ11_RS05955	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS05955	PF00501	AMP-binding enzyme
DNQ11_RS05965	PF00395	S-layer homology domain
DNQ11_RS05965	PF01520	N-acetylmuramoyl-L-alanine amidase
DNQ11_RS05970	PF05593	RHS Repeat
DNQ11_RS05985	PF05593	RHS Repeat
DNQ11_RS06020	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
DNQ11_RS06030	PF01966	HD domain
DNQ11_RS06040	PF04542	Sigma-70 region 2 
DNQ11_RS06040	PF08281	Sigma-70, region 4
DNQ11_RS06045	PF06445	GyrI-like small molecule binding domain
DNQ11_RS06045	PF12833	Helix-turn-helix domain
DNQ11_RS06060	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS06060	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS06065	PF00072	Response regulator receiver domain
DNQ11_RS06065	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS06090	PF16491	CAAX prenyl protease N-terminal, five membrane helices
DNQ11_RS06090	PF01435	Peptidase family M48
DNQ11_RS06095	PF00672	HAMP domain
DNQ11_RS06095	PF02743	Cache domain
DNQ11_RS06095	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS06100	PF00892	EamA-like transporter family
DNQ11_RS06105	PF03424	Carbohydrate binding domain (family 17/28)
DNQ11_RS06105	PF00150	Cellulase (glycosyl hydrolase family 5)
DNQ11_RS06105	PF00395	S-layer homology domain
DNQ11_RS06115	PF00395	S-layer homology domain
DNQ11_RS06120	PF01274	Malate synthase
DNQ11_RS06125	PF00463	Isocitrate lyase family
DNQ11_RS06135	PF00313	'Cold-shock' DNA-binding domain
DNQ11_RS06150	PF06338	ComK protein
DNQ11_RS06155	PF09335	SNARE associated Golgi protein
DNQ11_RS06160	PF10502	Signal peptidase, peptidase S26 
DNQ11_RS06165	PF13361	UvrD-like helicase C-terminal domain
DNQ11_RS06165	PF12705	PD-(D/E)XK nuclease superfamily
DNQ11_RS06170	PF12705	PD-(D/E)XK nuclease superfamily
DNQ11_RS06170	PF00580	UvrD/REP helicase N-terminal domain
DNQ11_RS06170	PF13361	UvrD-like helicase C-terminal domain
DNQ11_RS06180	PF10676	Spore germination protein gerPA/gerPF
DNQ11_RS06185	PF10970	Spore germination protein GerPE 
DNQ11_RS06195	PF10737	Spore germination protein GerPC
DNQ11_RS06200	PF10803	Spore germination GerPB
DNQ11_RS06205	PF10676	Spore germination protein gerPA/gerPF
DNQ11_RS06215	PF01557	Fumarylacetoacetate (FAA) hydrolase family
DNQ11_RS06225	PF00202	Aminotransferase class-III
DNQ11_RS06230	PF07457	Protein of unknown function (DUF1516)
DNQ11_RS06240	PF00733	Asparagine synthase
DNQ11_RS06240	PF13537	Glutamine amidotransferase domain
DNQ11_RS06245	PF00762	Ferrochelatase
DNQ11_RS06250	PF06628	Catalase-related immune-responsive
DNQ11_RS06250	PF00199	Catalase
DNQ11_RS06255	PF00909	Ammonium Transporter Family
DNQ11_RS06265	PF00128	Alpha amylase, catalytic domain
DNQ11_RS06275	PF04461	Protein of unknown function (DUF520)
DNQ11_RS06280	PF13509	S1 domain
DNQ11_RS06280	PF17783	CvfB-like winged helix domain
DNQ11_RS06290	PF00639	PPIC-type PPIASE domain
DNQ11_RS06300	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS06300	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS06305	PF12758	Protein of unknown function (DUF3813)
DNQ11_RS06325	PF14168	YjzC-like protein
DNQ11_RS06330	PF00004	ATPase family associated with various cellular activities (AAA)
DNQ11_RS06330	PF07724	AAA domain (Cdc48 subfamily)
DNQ11_RS06330	PF17871	AAA lid domain
DNQ11_RS06330	PF02861	Clp amino terminal domain, pathogenicity island component
DNQ11_RS06330	PF10431	C-terminal, D2-small domain, of ClpB protein 
DNQ11_RS06350	PF10815	ComZ
DNQ11_RS06360	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
DNQ11_RS06360	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
DNQ11_RS06365	PF02801	Beta-ketoacyl synthase, C-terminal domain
DNQ11_RS06365	PF00109	Beta-ketoacyl synthase, N-terminal domain
DNQ11_RS06370	PF10026	Predicted Zn-dependent protease (DUF2268)
DNQ11_RS06375	PF12227	Protein of unknown function (DUF3603)
DNQ11_RS06385	PF00579	tRNA synthetases class I (W and Y)
DNQ11_RS06400	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS06405	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS06410	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS06410	PF12911	N-terminal TM domain of oligopeptide transport permease C
DNQ11_RS06415	PF00005	ABC transporter
DNQ11_RS06415	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS06420	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS06420	PF00005	ABC transporter
DNQ11_RS06425	PF01554	MatE
DNQ11_RS06430	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS06445	PF03960	ArsC family
DNQ11_RS06450	PF03741	Integral membrane protein TerC family
DNQ11_RS06455	PF05389	Negative regulator of genetic competence (MecA)
DNQ11_RS06460	PF13091	PLD-like domain
DNQ11_RS06460	PF13396	Phospholipase_D-nuclease N-terminal
DNQ11_RS06470	PF01432	Peptidase family M3
DNQ11_RS06470	PF08439	Oligopeptidase F
DNQ11_RS06485	PF01152	Bacterial-like globin
DNQ11_RS06490	PF01928	CYTH domain
DNQ11_RS06500	PF04607	Region found in RelA / SpoT proteins
DNQ11_RS06505	PF01513	ATP-NAD kinase
DNQ11_RS06510	PF00849	RNA pseudouridylate synthase
DNQ11_RS06520	PF00149	Calcineurin-like phosphoesterase
DNQ11_RS06530	PF00535	Glycosyl transferase family 2
DNQ11_RS06535	PF08241	Methyltransferase domain
DNQ11_RS06540	PF05711	Macrocin-O-methyltransferase (TylF)
DNQ11_RS06550	PF00535	Glycosyl transferase family 2
DNQ11_RS06550	PF13181	Tetratricopeptide repeat
DNQ11_RS06570	PF00483	Nucleotidyl transferase
DNQ11_RS06575	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
DNQ11_RS06580	PF16363	GDP-mannose 4,6 dehydratase
DNQ11_RS06585	PF04321	RmlD substrate binding domain
DNQ11_RS06605	PF07098	Protein of unknown function (DUF1360)
DNQ11_RS06625	PF00580	UvrD/REP helicase N-terminal domain
DNQ11_RS06625	PF13361	UvrD-like helicase C-terminal domain
DNQ11_RS06630	PF13673	Acetyltransferase (GNAT) domain
DNQ11_RS06640	PF00756	Putative esterase
DNQ11_RS06655	PF02368	Bacterial Ig-like domain (group 2)
DNQ11_RS06660	PF00474	Sodium:solute symporter family
DNQ11_RS06670	PF04715	Anthranilate synthase component I, N terminal region
DNQ11_RS06670	PF00425	chorismate binding enzyme
DNQ11_RS06675	PF00117	Glutamine amidotransferase class-I
DNQ11_RS06675	PF02885	Glycosyl transferase family, helical bundle domain
DNQ11_RS06675	PF00591	Glycosyl transferase family, a/b domain
DNQ11_RS06680	PF02885	Glycosyl transferase family, helical bundle domain
DNQ11_RS06680	PF00591	Glycosyl transferase family, a/b domain
DNQ11_RS06685	PF00218	Indole-3-glycerol phosphate synthase
DNQ11_RS06690	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
DNQ11_RS06695	PF00291	Pyridoxal-phosphate dependent enzyme
DNQ11_RS06700	PF00290	Tryptophan synthase alpha chain
DNQ11_RS06710	PF02652	L-lactate permease
DNQ11_RS06715	PF10042	Uncharacterized conserved protein (DUF2278)
DNQ11_RS06745	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS06745	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
DNQ11_RS06775	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
DNQ11_RS06775	PF02817	e3 binding domain
DNQ11_RS06775	PF00364	Biotin-requiring enzyme
DNQ11_RS06780	PF02779	Transketolase, pyrimidine binding domain
DNQ11_RS06780	PF16870	2-oxoglutarate dehydrogenase C-terminal
DNQ11_RS06780	PF00676	Dehydrogenase E1 component
DNQ11_RS06785	PF01381	Helix-turn-helix
DNQ11_RS06845	PF13649	Methyltransferase domain
DNQ11_RS06860	PF07943	Penicillin-binding protein 5, C-terminal domain
DNQ11_RS06860	PF00768	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS06870	PF12389	Camelysin metallo-endopeptidase
DNQ11_RS06880	PF12389	Camelysin metallo-endopeptidase
DNQ11_RS06885	PF08671	Anti-repressor SinI
DNQ11_RS06885	PF01381	Helix-turn-helix
DNQ11_RS06895	PF05547	Immune inhibitor A peptidase M6
DNQ11_RS06900	PF00171	Aldehyde dehydrogenase family
DNQ11_RS06905	PF08402	TOBE domain
DNQ11_RS06905	PF00005	ABC transporter
DNQ11_RS06910	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS06915	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS06920	PF13416	Bacterial extracellular solute-binding protein
DNQ11_RS06930	PF03176	MMPL family
DNQ11_RS06940	PF01479	S4 domain
DNQ11_RS06940	PF00849	RNA pseudouridylate synthase
DNQ11_RS06950	PF00188	Cysteine-rich secretory protein family
DNQ11_RS06955	PF13183	4Fe-4S dicluster domain
DNQ11_RS06955	PF02754	Cysteine-rich domain
DNQ11_RS06960	PF01565	FAD binding domain 
DNQ11_RS06960	PF02913	FAD linked oxidases, C-terminal domain
DNQ11_RS06965	PF17853	GGDEF-like domain
DNQ11_RS06965	PF05651	Putative sugar diacid recognition
DNQ11_RS06965	PF13556	PucR C-terminal helix-turn-helix domain
DNQ11_RS06975	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS06975	PF00072	Response regulator receiver domain
DNQ11_RS06980	PF00989	PAS fold
DNQ11_RS06980	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS06980	PF00672	HAMP domain
DNQ11_RS06980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS06980	PF18698	Histidine kinase sensor domain
DNQ11_RS06985	PF07729	FCD domain
DNQ11_RS06985	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS06990	PF02754	Cysteine-rich domain
DNQ11_RS06995	PF02589	LUD domain
DNQ11_RS06995	PF13183	4Fe-4S dicluster domain
DNQ11_RS06995	PF11870	Domain of unknown function (DUF3390)
DNQ11_RS07000	PF02589	LUD domain
DNQ11_RS07005	PF06750	Bacterial Peptidase A24 N-terminal domain
DNQ11_RS07005	PF01478	Type IV leader peptidase family
DNQ11_RS07015	PF01226	Formate/nitrite transporter
DNQ11_RS07020	PF03741	Integral membrane protein TerC family
DNQ11_RS07025	PF02386	Cation transport protein
DNQ11_RS07030	PF00269	Small, acid-soluble spore proteins, alpha/beta type
DNQ11_RS07035	PF01575	MaoC like domain
DNQ11_RS07060	PF00561	alpha/beta hydrolase fold
DNQ11_RS07065	PF01266	FAD dependent oxidoreductase
DNQ11_RS07070	PF02386	Cation transport protein
DNQ11_RS07105	PF13419	Haloacid dehalogenase-like hydrolase
DNQ11_RS07110	PF00266	Aminotransferase class-V
DNQ11_RS07120	PF08220	DeoR-like helix-turn-helix domain
DNQ11_RS07120	PF00455	DeoR C terminal sensor domain
DNQ11_RS07145	PF04748	Divergent polysaccharide deacetylase
DNQ11_RS07150	PF09388	Spo0E like sporulation regulatory protein
DNQ11_RS07155	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS07155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS07155	PF02743	Cache domain
DNQ11_RS07160	PF01047	MarR family
DNQ11_RS07170	PF12867	DinB superfamily
DNQ11_RS07180	PF13188	PAS domain
DNQ11_RS07180	PF00989	PAS fold
DNQ11_RS07180	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS07180	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS07180	PF13426	PAS domain
DNQ11_RS07185	PF06508	Queuosine biosynthesis protein QueC
DNQ11_RS07190	PF01242	6-pyruvoyl tetrahydropterin synthase
DNQ11_RS07195	PF04055	Radical SAM superfamily
DNQ11_RS07200	PF14489	QueF-like protein
DNQ11_RS07205	PF09953	Uncharacterized protein conserved in bacteria (DUF2187)
DNQ11_RS07240	PF07972	NrdI Flavodoxin like 
DNQ11_RS07260	PF00268	Ribonucleotide reductase, small chain
DNQ11_RS07265	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS07270	PF00005	ABC transporter
DNQ11_RS07280	PF00005	ABC transporter
DNQ11_RS07300	PF01037	Lrp/AsnC ligand binding domain
DNQ11_RS07310	PF00857	Isochorismatase family
DNQ11_RS07320	PF17676	LD-carboxypeptidase C-terminal domain
DNQ11_RS07320	PF02016	LD-carboxypeptidase N-terminal domain
DNQ11_RS07325	PF03060	Nitronate monooxygenase
DNQ11_RS07330	PF04914	DltD protein
DNQ11_RS07335	PF00550	Phosphopantetheine attachment site
DNQ11_RS07340	PF03062	MBOAT, membrane-bound O-acyltransferase family
DNQ11_RS07345	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS07345	PF00501	AMP-binding enzyme
DNQ11_RS07355	PF01546	Peptidase family M20/M25/M40
DNQ11_RS07355	PF07687	Peptidase dimerisation domain
DNQ11_RS07365	PF00258	Flavodoxin
DNQ11_RS07380	PF01636	Phosphotransferase enzyme family
DNQ11_RS07405	PF01554	MatE
DNQ11_RS07410	PF02673	Bacitracin resistance protein BacA
DNQ11_RS07425	PF01047	MarR family
DNQ11_RS07435	PF00375	Sodium:dicarboxylate symporter family
DNQ11_RS07440	PF02386	Cation transport protein
DNQ11_RS07450	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
DNQ11_RS07465	PF03698	Uncharacterised protein family (UPF0180)
DNQ11_RS07480	PF01063	Amino-transferase class IV
DNQ11_RS07485	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
DNQ11_RS07485	PF00205	Thiamine pyrophosphate enzyme, central domain
DNQ11_RS07485	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
DNQ11_RS07490	PF01842	ACT domain
DNQ11_RS07490	PF10369	Small subunit of acetolactate synthase
DNQ11_RS07495	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
DNQ11_RS07495	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
DNQ11_RS07500	PF00682	HMGL-like
DNQ11_RS07500	PF08502	LeuA allosteric (dimerisation) domain
DNQ11_RS07505	PF00180	Isocitrate/isopropylmalate dehydrogenase
DNQ11_RS07510	PF00330	Aconitase family (aconitate hydratase)
DNQ11_RS07515	PF00694	Aconitase C-terminal domain
DNQ11_RS07520	PF13393	Histidyl-tRNA synthetase
DNQ11_RS07525	PF01634	ATP phosphoribosyltransferase
DNQ11_RS07530	PF00815	Histidinol dehydrogenase
DNQ11_RS07535	PF00475	Imidazoleglycerol-phosphate dehydratase
DNQ11_RS07540	PF00117	Glutamine amidotransferase class-I
DNQ11_RS07545	PF00977	Histidine biosynthesis protein
DNQ11_RS07550	PF00977	Histidine biosynthesis protein
DNQ11_RS07555	PF01502	Phosphoribosyl-AMP cyclohydrolase
DNQ11_RS07560	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
DNQ11_RS07565	PF02811	PHP domain
DNQ11_RS07575	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
DNQ11_RS07575	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
DNQ11_RS07580	PF01066	CDP-alcohol phosphatidyltransferase
DNQ11_RS07585	PF00884	Sulfatase
DNQ11_RS07595	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
DNQ11_RS07595	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
DNQ11_RS07605	PF01507	Phosphoadenosine phosphosulfate reductase family
DNQ11_RS07610	PF14306	PUA-like domain
DNQ11_RS07610	PF01747	ATP-sulfurylase
DNQ11_RS07620	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
DNQ11_RS07620	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
DNQ11_RS07630	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
DNQ11_RS07635	PF01903	CbiX
DNQ11_RS07650	PF00209	Sodium:neurotransmitter symporter family
DNQ11_RS07660	PF00375	Sodium:dicarboxylate symporter family
DNQ11_RS07670	PF03553	Na+/H+ antiporter family
DNQ11_RS07685	PF09922	Cell wall-active antibiotics response 4TMS YvqF
DNQ11_RS07690	PF00672	HAMP domain
DNQ11_RS07690	PF07730	Histidine kinase
DNQ11_RS07690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS07695	PF00196	Bacterial regulatory proteins, luxR family
DNQ11_RS07695	PF00072	Response regulator receiver domain
DNQ11_RS07705	PF05525	Branched-chain amino acid transport protein
DNQ11_RS07715	PF08241	Methyltransferase domain
DNQ11_RS07740	PF00042	Globin
DNQ11_RS07740	PF00175	Oxidoreductase NAD-binding domain 
DNQ11_RS07740	PF00970	Oxidoreductase FAD-binding domain
DNQ11_RS07760	PF01925	Sulfite exporter TauE/SafE
DNQ11_RS07765	PF01384	Phosphate transporter family
DNQ11_RS07770	PF01865	Protein of unknown function DUF47
DNQ11_RS07775	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS07775	PF00912	Transglycosylase
DNQ11_RS07795	PF00989	PAS fold
DNQ11_RS07795	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS07795	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS07800	PF01904	Protein of unknown function DUF72
DNQ11_RS07810	PF00589	Phage integrase family
DNQ11_RS07815	PF00989	PAS fold
DNQ11_RS07815	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS07815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS07815	PF16736	Single Cache-like 
DNQ11_RS07820	PF01048	Phosphorylase superfamily
DNQ11_RS07845	PF09924	Uncharacterised conserved protein (DUF2156)
DNQ11_RS07845	PF03706	Lysylphosphatidylglycerol synthase TM region
DNQ11_RS07860	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
DNQ11_RS07860	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
DNQ11_RS07865	PF07943	Penicillin-binding protein 5, C-terminal domain
DNQ11_RS07865	PF00768	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS07870	PF07670	Nucleoside recognition
DNQ11_RS07875	PF07670	Nucleoside recognition
DNQ11_RS07880	PF01479	S4 domain
DNQ11_RS07880	PF00849	RNA pseudouridylate synthase
DNQ11_RS07885	PF00578	AhpC/TSA family
DNQ11_RS07890	PF05140	ResB-like family 
DNQ11_RS07895	PF01578	Cytochrome C assembly protein
DNQ11_RS07900	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS07900	PF00072	Response regulator receiver domain
DNQ11_RS07905	PF00989	PAS fold
DNQ11_RS07905	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS07905	PF00672	HAMP domain
DNQ11_RS07905	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS07905	PF18698	Histidine kinase sensor domain
DNQ11_RS07910	PF01923	Cobalamin adenosyltransferase
DNQ11_RS07925	PF12822	ECF transporter, substrate-specific component
DNQ11_RS07935	PF14493	Helix-turn-helix domain
DNQ11_RS07940	PF00271	Helicase conserved C-terminal domain
DNQ11_RS07940	PF00270	DEAD/DEAH box helicase
DNQ11_RS07945	PF02517	CPBP intramembrane metalloprotease
DNQ11_RS07960	PF02310	B12 binding domain
DNQ11_RS07960	PF13411	MerR HTH family regulatory protein
DNQ11_RS07960	PF02607	B12 binding domain
DNQ11_RS07965	PF05389	Negative regulator of genetic competence (MecA)
DNQ11_RS07970	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
DNQ11_RS07970	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
DNQ11_RS07995	PF00710	Asparaginase, N-terminal
DNQ11_RS07995	PF17763	Glutaminase/Asparaginase C-terminal domain
DNQ11_RS08005	PF02224	Cytidylate kinase
DNQ11_RS08010	PF00575	S1 RNA binding domain
DNQ11_RS08015	PF01070	FMN-dependent dehydrogenase
DNQ11_RS08020	PF14140	YpzI-like protein
DNQ11_RS08030	PF14045	YIEGIA protein
DNQ11_RS08040	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
DNQ11_RS08040	PF01926	50S ribosome-binding GTPase
DNQ11_RS08045	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
DNQ11_RS08045	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
DNQ11_RS08055	PF10966	Protein of unknown function (DUF2768)
DNQ11_RS08065	PF09547	Stage IV sporulation protein A (spore_IV_A)
DNQ11_RS08070	PF00216	Bacterial DNA-binding protein
DNQ11_RS08075	PF01227	GTP cyclohydrolase I
DNQ11_RS08080	PF07307	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
DNQ11_RS08085	PF01209	ubiE/COQ5 methyltransferase family
DNQ11_RS08090	PF00348	Polyprenyl synthetase
DNQ11_RS08095	PF00334	Nucleoside diphosphate kinase
DNQ11_RS08100	PF01264	Chorismate synthase
DNQ11_RS08105	PF01761	3-dehydroquinate synthase
DNQ11_RS08110	PF00155	Aminotransferase class I and II
DNQ11_RS08120	PF08864	UPF0302 domain
DNQ11_RS08120	PF08858	IDEAL domain
DNQ11_RS08125	PF10673	Protein of unknown function (DUF2487)
DNQ11_RS08130	PF00355	Rieske [2Fe-2S] domain
DNQ11_RS08135	PF00033	Cytochrome b/b6/petB
DNQ11_RS08140	PF00032	Cytochrome b(C-terminal)/b6/petD
DNQ11_RS08140	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
DNQ11_RS08150	PF07187	Protein of unknown function (DUF1405)
DNQ11_RS08160	PF09577	Sporulation protein YpjB (SpoYpjB)
DNQ11_RS08165	PF04298	Putative neutral zinc metallopeptidase
DNQ11_RS08175	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS08175	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS08185	PF03819	MazG nucleotide pyrophosphohydrolase domain
DNQ11_RS08190	PF01113	Dihydrodipicolinate reductase, N-terminus
DNQ11_RS08190	PF05173	Dihydrodipicolinate reductase, C-terminus
DNQ11_RS08195	PF02142	MGS-like domain
DNQ11_RS08200	PF02585	GlcNAc-PI de-N-acetylase
DNQ11_RS08205	PF00534	Glycosyl transferases group 1
DNQ11_RS08205	PF13439	Glycosyltransferase Family 4
DNQ11_RS08210	PF01743	Poly A polymerase head domain
DNQ11_RS08210	PF12627	Probable RNA and SrmB- binding site of polymerase A
DNQ11_RS08210	PF13735	tRNA nucleotidyltransferase domain 2 putative
DNQ11_RS08215	PF08279	HTH domain
DNQ11_RS08215	PF03099	Biotin/lipoate A/B protein ligase family
DNQ11_RS08215	PF02237	Biotin protein ligase C terminal domain
DNQ11_RS08230	PF02548	Ketopantoate hydroxymethyltransferase
DNQ11_RS08235	PF02569	Pantoate-beta-alanine ligase
DNQ11_RS08240	PF02261	Aspartate decarboxylase
DNQ11_RS08245	PF13307	Helicase C-terminal domain
DNQ11_RS08245	PF04851	Type III restriction enzyme, res subunit
DNQ11_RS08245	PF00929	Exonuclease
DNQ11_RS08250	PF14084	Protein of unknown function (DUF4264)
DNQ11_RS08260	PF00155	Aminotransferase class I and II
DNQ11_RS08265	PF07261	Replication initiation and membrane attachment
DNQ11_RS08270	PF10576	Iron-sulfur binding domain of endonuclease III
DNQ11_RS08270	PF00633	Helix-hairpin-helix motif
DNQ11_RS08270	PF00730	HhH-GPD superfamily base excision DNA repair protein
DNQ11_RS08280	PF00912	Transglycosylase
DNQ11_RS08280	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS08285	PF03838	Recombination protein U
DNQ11_RS08290	PF10720	Protein of unknown function (DUF2515)
DNQ11_RS08325	PF06908	YspA SLOG family
DNQ11_RS08330	PF05103	DivIVA protein
DNQ11_RS08340	PF01170	Putative RNA methylase family UPF0020
DNQ11_RS08340	PF02926	THUMP domain
DNQ11_RS08350	PF13307	Helicase C-terminal domain
DNQ11_RS08355	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
DNQ11_RS08365	PF01636	Phosphotransferase enzyme family
DNQ11_RS08370	PF00557	Metallopeptidase family M24
DNQ11_RS08375	PF00156	Phosphoribosyl transferase domain
DNQ11_RS08380	PF00860	Permease family
DNQ11_RS08385	PF04235	Protein of unknown function (DUF418)
DNQ11_RS08395	PF00350	Dynamin family
DNQ11_RS08405	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS08410	PF10752	Protein of unknown function (DUF2533) 
DNQ11_RS08415	PF00581	Rhodanese-like domain
DNQ11_RS08440	PF03738	Glutathionylspermidine synthase preATP-grasp
DNQ11_RS08450	PF00690	Cation transporter/ATPase, N-terminus
DNQ11_RS08450	PF00689	Cation transporting ATPase, C-terminus
DNQ11_RS08455	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
DNQ11_RS08455	PF01367	5'-3' exonuclease, C-terminal SAM fold
DNQ11_RS08485	PF02397	Bacterial sugar transferase
DNQ11_RS08500	PF00535	Glycosyl transferase family 2
DNQ11_RS08505	PF13439	Glycosyltransferase Family 4
DNQ11_RS08505	PF00534	Glycosyl transferases group 1
DNQ11_RS08520	PF13673	Acetyltransferase (GNAT) domain
DNQ11_RS08520	PF18014	Acetyltransferase (GNAT) domain
DNQ11_RS08540	PF13456	Reverse transcriptase-like
DNQ11_RS08545	PF01263	Aldose 1-epimerase
DNQ11_RS08570	PF00313	'Cold-shock' DNA-binding domain
DNQ11_RS08580	PF01810	LysE type translocator
DNQ11_RS08595	PF04341	Protein of unknown function, DUF485
DNQ11_RS08600	PF00474	Sodium:solute symporter family
DNQ11_RS08605	PF00202	Aminotransferase class-III
DNQ11_RS08620	PF00999	Sodium/hydrogen exchanger family
DNQ11_RS08625	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS08625	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
DNQ11_RS08625	PF17770	Ribonuclease J C-terminal domain
DNQ11_RS08630	PF13411	MerR HTH family regulatory protein
DNQ11_RS08630	PF06445	GyrI-like small molecule binding domain
DNQ11_RS08640	PF04239	Protein of unknown function (DUF421)
DNQ11_RS08645	PF02698	DUF218 domain
DNQ11_RS08655	PF00881	Nitroreductase family
DNQ11_RS08700	PF17209	Hfq protein
DNQ11_RS08710	PF01618	MotA/TolQ/ExbB proton channel family
DNQ11_RS08715	PF00691	OmpA family
DNQ11_RS08715	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
DNQ11_RS08720	PF00072	Response regulator receiver domain
DNQ11_RS08730	PF04509	CheC-like family
DNQ11_RS08730	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
DNQ11_RS08745	PF03705	CheR methyltransferase, all-alpha domain
DNQ11_RS08745	PF01739	CheR methyltransferase, SAM binding domain
DNQ11_RS08765	PF00460	Flagella basal body rod protein
DNQ11_RS08765	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
DNQ11_RS08790	PF00460	Flagella basal body rod protein
DNQ11_RS08795	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
DNQ11_RS08795	PF00460	Flagella basal body rod protein
DNQ11_RS08800	PF02049	Flagellar hook-basal body complex protein FliE
DNQ11_RS08810	PF14842	FliG N-terminal domain
DNQ11_RS08810	PF14841	FliG middle domain
DNQ11_RS08810	PF01706	FliG C-terminal domain
DNQ11_RS08820	PF02874	ATP synthase alpha/beta family, beta-barrel domain
DNQ11_RS08820	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
DNQ11_RS08820	PF18269	T3SS EscN ATPase C-terminal domain
DNQ11_RS08845	PF00460	Flagella basal body rod protein
DNQ11_RS08845	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
DNQ11_RS08845	PF07559	Flagellar basal body protein FlaE
DNQ11_RS08860	PF00072	Response regulator receiver domain
DNQ11_RS08860	PF01584	CheW-like domain
DNQ11_RS08865	PF12181	DNA binding domain of the motility gene repressor (MogR)
DNQ11_RS08870	PF00535	Glycosyl transferase family 2
DNQ11_RS08910	PF00535	Glycosyl transferase family 2
DNQ11_RS08910	PF13181	Tetratricopeptide repeat
DNQ11_RS08925	PF00700	Bacterial flagellin C-terminal helical region
DNQ11_RS08925	PF00669	Bacterial flagellin N-terminal helical region
DNQ11_RS08930	PF01464	Transglycosylase SLT domain
DNQ11_RS08945	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
DNQ11_RS08945	PF04509	CheC-like family
DNQ11_RS08955	PF00813	FliP family
DNQ11_RS08960	PF01313	Bacterial export proteins, family 3
DNQ11_RS08970	PF01312	FlhB HrpN YscU SpaS Family
DNQ11_RS08975	PF00771	FHIPEP family
DNQ11_RS08980	PF00448	SRP54-type protein, GTPase domain
DNQ11_RS08985	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
DNQ11_RS08985	PF00460	Flagella basal body rod protein
DNQ11_RS08990	PF02272	DHHA1 domain
DNQ11_RS08990	PF01411	tRNA synthetases class II (A)
DNQ11_RS08990	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
DNQ11_RS09015	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS09015	PF17932	Tetracyclin repressor-like, C-terminal domain
DNQ11_RS09020	PF17329	Family of unknown function (DUF5367)
DNQ11_RS09035	PF03992	Antibiotic biosynthesis monooxygenase
DNQ11_RS09040	PF08141	Small acid-soluble spore protein H family
DNQ11_RS09060	PF03466	LysR substrate binding domain
DNQ11_RS09060	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS09065	PF08402	TOBE domain
DNQ11_RS09065	PF00005	ABC transporter
DNQ11_RS09075	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS09080	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS09080	PF12706	Beta-lactamase superfamily domain
DNQ11_RS09090	PF10787	Uncharacterised protein from bacillus cereus group
DNQ11_RS09110	PF00768	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS09110	PF07943	Penicillin-binding protein 5, C-terminal domain
DNQ11_RS09120	PF00300	Histidine phosphatase superfamily (branch 1)
DNQ11_RS09150	PF13537	Glutamine amidotransferase domain
DNQ11_RS09150	PF00733	Asparagine synthase
DNQ11_RS09170	PF16916	Dimerisation domain of Zinc Transporter
DNQ11_RS09170	PF01545	Cation efflux family
DNQ11_RS09180	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS09180	PF07729	FCD domain
DNQ11_RS09185	PF00892	EamA-like transporter family
DNQ11_RS09190	PF02492	CobW/HypB/UreG, nucleotide-binding domain
DNQ11_RS09190	PF07683	Cobalamin synthesis protein cobW C-terminal domain
DNQ11_RS09200	PF03773	Predicted permease
DNQ11_RS09210	PF00535	Glycosyl transferase family 2
DNQ11_RS09215	PF03553	Na+/H+ antiporter family
DNQ11_RS09220	PF10415	Fumarase C C-terminus
DNQ11_RS09220	PF00206	Lyase
DNQ11_RS09250	PF03575	Peptidase family S51
DNQ11_RS09270	PF02683	Cytochrome C biogenesis protein transmembrane region
DNQ11_RS09275	PF00578	AhpC/TSA family
DNQ11_RS09300	PF00291	Pyridoxal-phosphate dependent enzyme
DNQ11_RS09305	PF04286	Protein of unknown function (DUF445)
DNQ11_RS09335	PF00072	Response regulator receiver domain
DNQ11_RS09335	PF00196	Bacterial regulatory proteins, luxR family
DNQ11_RS09340	PF07730	Histidine kinase
DNQ11_RS09340	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS09340	PF13492	GAF domain
DNQ11_RS09340	PF13185	GAF domain
DNQ11_RS09345	PF00005	ABC transporter
DNQ11_RS09360	PF13091	PLD-like domain
DNQ11_RS09365	PF00696	Amino acid kinase family
DNQ11_RS09370	PF00375	Sodium:dicarboxylate symporter family
DNQ11_RS09375	PF10415	Fumarase C C-terminus
DNQ11_RS09375	PF00206	Lyase
DNQ11_RS09380	PF00390	Malic enzyme, N-terminal domain
DNQ11_RS09380	PF03949	Malic enzyme, NAD binding domain
DNQ11_RS09385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS09390	PF00072	Response regulator receiver domain
DNQ11_RS09390	PF08664	YcbB domain
DNQ11_RS09395	PF00176	SNF2 family N-terminal domain
DNQ11_RS09395	PF04434	SWIM zinc finger
DNQ11_RS09395	PF00271	Helicase conserved C-terminal domain
DNQ11_RS09415	PF03590	Aspartate-ammonia ligase
DNQ11_RS09435	PF13840	ACT domain 
DNQ11_RS09435	PF00696	Amino acid kinase family
DNQ11_RS09450	PF13761	Domain of unknown function (DUF4166)
DNQ11_RS09455	PF14158	YndJ-like protein
DNQ11_RS09460	PF00293	NUDIX domain
DNQ11_RS09465	PF13205	Bacterial Ig-like domain
DNQ11_RS09465	PF00395	S-layer homology domain
DNQ11_RS09465	PF02368	Bacterial Ig-like domain (group 2)
DNQ11_RS09475	PF07690	Major Facilitator Superfamily
DNQ11_RS09490	PF02554	Carbon starvation protein CstA
DNQ11_RS09495	PF03976	Polyphosphate kinase 2 (PPK2)
DNQ11_RS09510	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
DNQ11_RS09510	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
DNQ11_RS09520	PF16360	GTP-binding GTPase Middle Region
DNQ11_RS09520	PF13167	GTP-binding GTPase N-terminal
DNQ11_RS09520	PF01926	50S ribosome-binding GTPase
DNQ11_RS09530	PF07690	Major Facilitator Superfamily
DNQ11_RS09535	PF00291	Pyridoxal-phosphate dependent enzyme
DNQ11_RS09550	PF01943	Polysaccharide biosynthesis protein
DNQ11_RS09550	PF14667	Polysaccharide biosynthesis C-terminal domain
DNQ11_RS09555	PF00209	Sodium:neurotransmitter symporter family
DNQ11_RS09560	PF03422	Carbohydrate binding module (family 6)
DNQ11_RS09560	PF00457	Glycosyl hydrolases family 11
DNQ11_RS09560	PF01522	Polysaccharide deacetylase
DNQ11_RS09570	PF04239	Protein of unknown function (DUF421)
DNQ11_RS09590	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
DNQ11_RS09590	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
DNQ11_RS09610	PF01625	Peptide methionine sulfoxide reductase
DNQ11_RS09620	PF01063	Amino-transferase class IV
DNQ11_RS09625	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
DNQ11_RS09625	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
DNQ11_RS09625	PF00205	Thiamine pyrophosphate enzyme, central domain
DNQ11_RS09630	PF10369	Small subunit of acetolactate synthase
DNQ11_RS09635	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
DNQ11_RS09635	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
DNQ11_RS09640	PF00920	Dehydratase family
DNQ11_RS09645	PF00291	Pyridoxal-phosphate dependent enzyme
DNQ11_RS09645	PF00585	C-terminal regulatory domain of Threonine dehydratase
DNQ11_RS09655	PF09587	Bacterial capsule synthesis protein PGA_cap
DNQ11_RS09670	PF07690	Major Facilitator Superfamily
DNQ11_RS09675	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
DNQ11_RS09685	PF00072	Response regulator receiver domain
DNQ11_RS09685	PF04397	LytTr DNA-binding domain
DNQ11_RS09690	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
DNQ11_RS09690	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
DNQ11_RS09705	PF01979	Amidohydrolase family
DNQ11_RS09710	PF12146	Serine aminopeptidase, S33
DNQ11_RS09710	PF13026	Protein of unknown function (DUF3887)
DNQ11_RS09715	PF00005	ABC transporter
DNQ11_RS09720	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS09755	PF13186	Iron-sulfur cluster-binding domain
DNQ11_RS09755	PF04055	Radical SAM superfamily
DNQ11_RS09760	PF13302	Acetyltransferase (GNAT) domain
DNQ11_RS09765	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS09765	PF00072	Response regulator receiver domain
DNQ11_RS09780	PF01566	Natural resistance-associated macrophage protein
DNQ11_RS09785	PF17773	UPF0176 acylphosphatase like domain
DNQ11_RS09785	PF12368	Rhodanase C-terminal
DNQ11_RS09785	PF00581	Rhodanese-like domain
DNQ11_RS09795	PF08546	Ketopantoate reductase PanE/ApbA C terminal
DNQ11_RS09795	PF02558	Ketopantoate reductase PanE/ApbA
DNQ11_RS09815	PF05791	Bacillus haemolytic enterotoxin (HBL)
DNQ11_RS09820	PF05791	Bacillus haemolytic enterotoxin (HBL)
DNQ11_RS09830	PF04198	Putative sugar-binding domain
DNQ11_RS09835	PF01791	DeoC/LacD family aldolase
DNQ11_RS09840	PF07662	Na+ dependent nucleoside transporter C-terminus
DNQ11_RS09840	PF01773	Na+ dependent nucleoside transporter N-terminus
DNQ11_RS09845	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
DNQ11_RS09845	PF00591	Glycosyl transferase family, a/b domain
DNQ11_RS09845	PF02885	Glycosyl transferase family, helical bundle domain
DNQ11_RS09850	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
DNQ11_RS09860	PF05979	Bacterial protein of unknown function (DUF896)
DNQ11_RS09880	PF05195	Aminopeptidase P, N-terminal domain
DNQ11_RS09880	PF00557	Metallopeptidase family M24
DNQ11_RS09885	PF07732	Multicopper oxidase
DNQ11_RS09885	PF07731	Multicopper oxidase
DNQ11_RS09890	PF01551	Peptidase family M23
DNQ11_RS09900	PF01131	DNA topoisomerase
DNQ11_RS09900	PF01751	Toprim domain
DNQ11_RS09900	PF13342	C-terminal repeat of topoisomerase
DNQ11_RS09900	PF01396	Topoisomerase DNA binding C4 zinc finger
DNQ11_RS09915	PF02525	Flavodoxin-like fold
DNQ11_RS09930	PF04234	CopC domain
DNQ11_RS09930	PF05425	Copper resistance protein D
DNQ11_RS09930	PF13115	YtkA-like
DNQ11_RS09935	PF07987	Domain of unkown function (DUF1775)
DNQ11_RS09945	PF00892	EamA-like transporter family
DNQ11_RS09950	PF03466	LysR substrate binding domain
DNQ11_RS09950	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS09955	PF02082	Transcriptional regulator
DNQ11_RS09960	PF01323	DSBA-like thioredoxin domain
DNQ11_RS09965	PF00881	Nitroreductase family
DNQ11_RS09975	PF01425	Amidase
DNQ11_RS09980	PF01594	AI-2E family transporter
DNQ11_RS09985	PF00056	lactate/malate dehydrogenase, NAD binding domain
DNQ11_RS09985	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
DNQ11_RS09990	PF01593	Flavin containing amine oxidoreductase
DNQ11_RS09995	PF02492	CobW/HypB/UreG, nucleotide-binding domain
DNQ11_RS09995	PF07683	Cobalamin synthesis protein cobW C-terminal domain
DNQ11_RS10010	PF00501	AMP-binding enzyme
DNQ11_RS10010	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS10015	PF01575	MaoC like domain
DNQ11_RS10020	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
DNQ11_RS10020	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
DNQ11_RS10035	PF00005	ABC transporter
DNQ11_RS10035	PF12399	Branched-chain amino acid ATP-binding cassette transporter
DNQ11_RS10040	PF00005	ABC transporter
DNQ11_RS10045	PF02653	Branched-chain amino acid transport system / permease component
DNQ11_RS10055	PF03466	LysR substrate binding domain
DNQ11_RS10055	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS10075	PF01047	MarR family
DNQ11_RS10085	PF01654	Cytochrome bd terminal oxidase subunit I
DNQ11_RS10090	PF02322	Cytochrome bd terminal oxidase subunit II
DNQ11_RS10095	PF00005	ABC transporter
DNQ11_RS10095	PF00664	ABC transporter transmembrane region
DNQ11_RS10100	PF00664	ABC transporter transmembrane region
DNQ11_RS10100	PF00005	ABC transporter
DNQ11_RS10115	PF02016	LD-carboxypeptidase N-terminal domain
DNQ11_RS10115	PF17676	LD-carboxypeptidase C-terminal domain
DNQ11_RS10120	PF00768	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS10120	PF07943	Penicillin-binding protein 5, C-terminal domain
DNQ11_RS10135	PF00877	NlpC/P60 family
DNQ11_RS10135	PF01476	LysM domain
DNQ11_RS10150	PF00072	Response regulator receiver domain
DNQ11_RS10150	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS10155	PF16736	Single Cache-like 
DNQ11_RS10155	PF00989	PAS fold
DNQ11_RS10155	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS10155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS10165	PF00106	short chain dehydrogenase
DNQ11_RS10175	PF04439	Streptomycin adenylyltransferase
DNQ11_RS10180	PF01522	Polysaccharide deacetylase
DNQ11_RS10205	PF03447	Homoserine dehydrogenase, NAD binding domain
DNQ11_RS10205	PF00742	Homoserine dehydrogenase
DNQ11_RS10205	PF01842	ACT domain
DNQ11_RS10210	PF00291	Pyridoxal-phosphate dependent enzyme
DNQ11_RS10215	PF00288	GHMP kinases N terminal domain
DNQ11_RS10215	PF08544	GHMP kinases C terminal 
DNQ11_RS10230	PF03816	Cell envelope-related transcriptional attenuator domain
DNQ11_RS10240	PF00072	Response regulator receiver domain
DNQ11_RS10240	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS10245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS10245	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS10245	PF00989	PAS fold
DNQ11_RS10245	PF16736	Single Cache-like 
DNQ11_RS10250	PF01522	Polysaccharide deacetylase
DNQ11_RS10260	PF02308	MgtC family
DNQ11_RS10265	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS10270	PF04183	IucA / IucC family
DNQ11_RS10270	PF06276	Ferric iron reductase FhuF-like transporter
DNQ11_RS10275	PF04183	IucA / IucC family
DNQ11_RS10275	PF06276	Ferric iron reductase FhuF-like transporter
DNQ11_RS10280	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS10280	PF00501	AMP-binding enzyme
DNQ11_RS10295	PF01261	Xylose isomerase-like TIM barrel
DNQ11_RS10300	PF00269	Small, acid-soluble spore proteins, alpha/beta type
DNQ11_RS10310	PF01810	LysE type translocator
DNQ11_RS10325	PF01734	Patatin-like phospholipase
DNQ11_RS10350	PF13344	Haloacid dehalogenase-like hydrolase
DNQ11_RS10350	PF00293	NUDIX domain
DNQ11_RS10355	PF02540	NAD synthase
DNQ11_RS10365	PF18277	AbrB C-terminal domain
DNQ11_RS10365	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
DNQ11_RS10370	PF00082	Subtilase family
DNQ11_RS10375	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS10380	PF00248	Aldo/keto reductase family
DNQ11_RS10390	PF07690	Major Facilitator Superfamily
DNQ11_RS10410	PF03193	RsgA GTPase
DNQ11_RS10415	PF02743	Cache domain
DNQ11_RS10415	PF00672	HAMP domain
DNQ11_RS10415	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS10440	PF00210	Ferritin-like domain
DNQ11_RS10455	PF00296	Luciferase-like monooxygenase
DNQ11_RS10465	PF01593	Flavin containing amine oxidoreductase
DNQ11_RS10475	PF00248	Aldo/keto reductase family
DNQ11_RS10480	PF02492	CobW/HypB/UreG, nucleotide-binding domain
DNQ11_RS10480	PF07683	Cobalamin synthesis protein cobW C-terminal domain
DNQ11_RS10485	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS10565	PF09223	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
DNQ11_RS10565	PF01297	Zinc-uptake complex component A periplasmic
DNQ11_RS10575	PF13460	NAD(P)H-binding 
DNQ11_RS10580	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
DNQ11_RS10585	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
DNQ11_RS10585	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
DNQ11_RS10595	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS10600	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS10610	PF00300	Histidine phosphatase superfamily (branch 1)
DNQ11_RS10620	PF08757	CotH kinase protein
DNQ11_RS10625	PF00293	NUDIX domain
DNQ11_RS10630	PF09335	SNARE associated Golgi protein
DNQ11_RS10635	PF01943	Polysaccharide biosynthesis protein
DNQ11_RS10635	PF14667	Polysaccharide biosynthesis C-terminal domain
DNQ11_RS10645	PF03773	Predicted permease
DNQ11_RS10650	PF09323	Domain of unknown function (DUF1980)
DNQ11_RS10655	PF03061	Thioesterase superfamily
DNQ11_RS10665	PF13091	PLD-like domain
DNQ11_RS10665	PF13396	Phospholipase_D-nuclease N-terminal
DNQ11_RS10680	PF13460	NAD(P)H-binding 
DNQ11_RS10685	PF04306	Protein of unknown function (DUF456)
DNQ11_RS10690	PF01595	Cyclin M transmembrane N-terminal domain
DNQ11_RS10690	PF03471	Transporter associated domain
DNQ11_RS10690	PF00571	CBS domain
DNQ11_RS10705	PF05525	Branched-chain amino acid transport protein
DNQ11_RS10710	PF01588	Putative tRNA binding domain
DNQ11_RS10730	PF07454	Stage II sporulation protein P (SpoIIP)
DNQ11_RS10740	PF02557	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS10750	PF01425	Amidase
DNQ11_RS10755	PF07690	Major Facilitator Superfamily
DNQ11_RS10765	PF01145	SPFH domain / Band 7 family
DNQ11_RS10770	PF00300	Histidine phosphatase superfamily (branch 1)
DNQ11_RS10785	PF00842	Alanine racemase, C-terminal domain
DNQ11_RS10785	PF01168	Alanine racemase, N-terminal domain
DNQ11_RS10790	PF13847	Methyltransferase domain
DNQ11_RS10805	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
DNQ11_RS10810	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS10810	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS10815	PF00155	Aminotransferase class I and II
DNQ11_RS10815	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS10845	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS10905	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
DNQ11_RS10930	PF01209	ubiE/COQ5 methyltransferase family
DNQ11_RS10935	PF01268	Formate--tetrahydrofolate ligase
DNQ11_RS10945	PF00270	DEAD/DEAH box helicase
DNQ11_RS10945	PF00271	Helicase conserved C-terminal domain
DNQ11_RS10950	PF01261	Xylose isomerase-like TIM barrel
DNQ11_RS10955	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS10965	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS10965	PF00107	Zinc-binding dehydrogenase
DNQ11_RS10970	PF04542	Sigma-70 region 2 
DNQ11_RS10970	PF08281	Sigma-70, region 4
DNQ11_RS10995	PF00255	Glutathione peroxidase
DNQ11_RS11000	PF01841	Transglutaminase-like superfamily
DNQ11_RS11000	PF13559	Domain of unknown function (DUF4129)
DNQ11_RS11000	PF11992	Domain of unknown function (DUF3488)
DNQ11_RS11005	PF01882	Protein of unknown function DUF58
DNQ11_RS11010	PF17863	AAA lid domain
DNQ11_RS11010	PF07726	ATPase family associated with various cellular activities (AAA)
DNQ11_RS11025	PF14710	Respiratory nitrate reductase alpha N-terminal
DNQ11_RS11025	PF01568	Molydopterin dinucleotide binding domain
DNQ11_RS11025	PF00384	Molybdopterin oxidoreductase
DNQ11_RS11030	PF14711	Respiratory nitrate reductase beta C-terminal
DNQ11_RS11030	PF13247	4Fe-4S dicluster domain
DNQ11_RS11035	PF02613	Nitrate reductase delta subunit
DNQ11_RS11040	PF02665	Nitrate reductase gamma subunit
DNQ11_RS11045	PF00155	Aminotransferase class I and II
DNQ11_RS11045	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS11050	PF00005	ABC transporter
DNQ11_RS11060	PF00027	Cyclic nucleotide-binding domain
DNQ11_RS11060	PF00325	Bacterial regulatory proteins, crp family
DNQ11_RS11065	PF06463	Molybdenum Cofactor Synthesis C
DNQ11_RS11065	PF04055	Radical SAM superfamily
DNQ11_RS11070	PF00899	ThiF family
DNQ11_RS11075	PF03454	MoeA C-terminal region (domain IV)
DNQ11_RS11075	PF03453	MoeA N-terminal region (domain I and II)
DNQ11_RS11075	PF00994	Probable molybdopterin binding domain
DNQ11_RS11080	PF02391	MoaE protein
DNQ11_RS11090	PF07690	Major Facilitator Superfamily
DNQ11_RS11115	PF01903	CbiX
DNQ11_RS11120	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
DNQ11_RS11125	PF00355	Rieske [2Fe-2S] domain
DNQ11_RS11130	PF18267	Rubredoxin NAD+ reductase C-terminal domain
DNQ11_RS11130	PF04324	BFD-like [2Fe-2S] binding domain
DNQ11_RS11130	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
DNQ11_RS11130	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
DNQ11_RS11130	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS11135	PF04405	Domain of Unknown function (DUF542)  
DNQ11_RS11135	PF01814	Hemerythrin HHE cation binding domain
DNQ11_RS11170	PF04232	Stage V sporulation protein S (SpoVS)
DNQ11_RS11190	PF01510	N-acetylmuramoyl-L-alanine amidase
DNQ11_RS11205	PF01966	HD domain
DNQ11_RS11210	PF12848	ABC transporter
DNQ11_RS11210	PF16326	ABC transporter C-terminal domain
DNQ11_RS11210	PF00005	ABC transporter
DNQ11_RS11225	PF00436	Single-strand binding protein family
DNQ11_RS11230	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS11240	PF08712	Scaffold protein Nfu/NifU N terminal
DNQ11_RS11240	PF13769	Virulence factor
DNQ11_RS11250	PF06491	Disulphide isomerase
DNQ11_RS11255	PF04445	Putative SAM-dependent methyltransferase
DNQ11_RS11260	PF00750	tRNA synthetases class I (R)
DNQ11_RS11260	PF03485	Arginyl tRNA synthetase N terminal domain
DNQ11_RS11260	PF05746	DALR anticodon binding domain
DNQ11_RS11285	PF08264	Anticodon-binding domain of tRNA
DNQ11_RS11285	PF00133	tRNA synthetases class I (I, L, M and V)
DNQ11_RS11305	PF02875	Mur ligase family, glutamate ligase domain
DNQ11_RS11305	PF08245	Mur ligase middle domain
DNQ11_RS11305	PF01225	Mur ligase family, catalytic domain
DNQ11_RS11310	PF00152	tRNA synthetases class II (D, K and N) 
DNQ11_RS11310	PF01336	OB-fold nucleic acid binding domain
DNQ11_RS11330	PF12538	DNA transporter 
DNQ11_RS11330	PF01580	FtsK/SpoIIIE family
DNQ11_RS11425	PF02595	Glycerate kinase family
DNQ11_RS11430	PF00939	Sodium:sulfate symporter transmembrane region
DNQ11_RS11435	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS11435	PF00072	Response regulator receiver domain
DNQ11_RS11440	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS11440	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS11440	PF00672	HAMP domain
DNQ11_RS11455	PF00209	Sodium:neurotransmitter symporter family
DNQ11_RS11470	PF10997	Alternate to MurJ
DNQ11_RS11475	PF13419	Haloacid dehalogenase-like hydrolase
DNQ11_RS11485	PF00465	Iron-containing alcohol dehydrogenase 
DNQ11_RS11490	PF01177	Asp/Glu/Hydantoin racemase
DNQ11_RS11495	PF01980	tRNA-methyltransferase O
DNQ11_RS11500	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS11515	PF00005	ABC transporter
DNQ11_RS11525	PF14005	YpjP-like protein
DNQ11_RS11530	PF13419	Haloacid dehalogenase-like hydrolase
DNQ11_RS11550	PF07930	D-aminopeptidase, domain B
DNQ11_RS11550	PF00144	Beta-lactamase
DNQ11_RS11555	PF00303	Thymidylate synthase
DNQ11_RS11560	PF00186	Dihydrofolate reductase
DNQ11_RS11565	PF05223	NTF2-like N-terminal transpeptidase domain
DNQ11_RS11565	PF03717	Penicillin-binding Protein dimerisation domain
DNQ11_RS11565	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS11570	PF02525	Flavodoxin-like fold
DNQ11_RS11575	PF01553	Acyltransferase
DNQ11_RS11580	PF03006	Haemolysin-III related
DNQ11_RS11585	PF02416	mttA/Hcf106 family
DNQ11_RS11590	PF00902	Sec-independent protein translocase protein (TatC)
DNQ11_RS11605	PF02645	Uncharacterised protein, DegV family COG1307
DNQ11_RS11615	PF02630	SCO1/SenC
DNQ11_RS11620	PF00011	Hsp20/alpha crystallin family
DNQ11_RS11625	PF13537	Glutamine amidotransferase domain
DNQ11_RS11625	PF00733	Asparagine synthase
DNQ11_RS11645	PF01497	Periplasmic binding protein
DNQ11_RS11650	PF01063	Amino-transferase class IV
DNQ11_RS11655	PF00881	Nitroreductase family
DNQ11_RS11675	PF00293	NUDIX domain
DNQ11_RS11680	PF00011	Hsp20/alpha crystallin family
DNQ11_RS11685	PF00924	Mechanosensitive ion channel
DNQ11_RS11690	PF13185	GAF domain
DNQ11_RS11690	PF07730	Histidine kinase
DNQ11_RS11695	PF00196	Bacterial regulatory proteins, luxR family
DNQ11_RS11695	PF00072	Response regulator receiver domain
DNQ11_RS11705	PF00107	Zinc-binding dehydrogenase
DNQ11_RS11705	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS11730	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
DNQ11_RS11730	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
DNQ11_RS11735	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
DNQ11_RS11735	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
DNQ11_RS11750	PF03358	NADPH-dependent FMN reductase
DNQ11_RS11765	PF00571	CBS domain
DNQ11_RS11765	PF00005	ABC transporter
DNQ11_RS11770	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS11775	PF13520	Amino acid permease
DNQ11_RS11805	PF00571	CBS domain
DNQ11_RS11805	PF01595	Cyclin M transmembrane N-terminal domain
DNQ11_RS11805	PF03471	Transporter associated domain
DNQ11_RS11810	PF00171	Aldehyde dehydrogenase family
DNQ11_RS11815	PF07997	Protein of unknown function (DUF1694)
DNQ11_RS11820	PF09385	Histidine kinase N terminal
DNQ11_RS11835	PF00202	Aminotransferase class-III
DNQ11_RS11840	PF01144	Coenzyme A transferase
DNQ11_RS11845	PF01144	Coenzyme A transferase
DNQ11_RS11850	PF07687	Peptidase dimerisation domain
DNQ11_RS11850	PF01546	Peptidase family M20/M25/M40
DNQ11_RS11855	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS11860	PF00158	Sigma-54 interaction domain
DNQ11_RS11860	PF13426	PAS domain
DNQ11_RS11860	PF02954	Bacterial regulatory protein, Fis family
DNQ11_RS11870	PF12544	Lysine-2,3-aminomutase 
DNQ11_RS11875	PF14122	YokU-like protein, putative antitoxin
DNQ11_RS11880	PF06855	YozE SAM-like fold
DNQ11_RS11895	PF14162	YozD-like protein
DNQ11_RS11910	PF07070	SpoOM protein
DNQ11_RS11915	PF01569	PAP2 superfamily
DNQ11_RS11920	PF16916	Dimerisation domain of Zinc Transporter
DNQ11_RS11920	PF01545	Cation efflux family
DNQ11_RS11925	PF00085	Thioredoxin
DNQ11_RS11940	PF14436	Bacterial EndoU nuclease
DNQ11_RS11940	PF04740	LXG domain of WXG superfamily
DNQ11_RS11945	PF03424	Carbohydrate binding domain (family 17/28)
DNQ11_RS11945	PF00150	Cellulase (glycosyl hydrolase family 5)
DNQ11_RS11945	PF00395	S-layer homology domain
DNQ11_RS11955	PF04471	Restriction endonuclease
DNQ11_RS12090	PF10676	Spore germination protein gerPA/gerPF
DNQ11_RS12110	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS12110	PF00912	Transglycosylase
DNQ11_RS12115	PF07690	Major Facilitator Superfamily
DNQ11_RS12120	PF01521	Iron-sulphur cluster biosynthesis
DNQ11_RS12125	PF00285	Citrate synthase, C-terminal domain
DNQ11_RS12130	PF03972	MmgE/PrpD family
DNQ11_RS12140	PF02770	Acyl-CoA dehydrogenase, middle domain
DNQ11_RS12140	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
DNQ11_RS12140	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
DNQ11_RS12145	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
DNQ11_RS12145	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
DNQ11_RS12150	PF00171	Aldehyde dehydrogenase family
DNQ11_RS12155	PF01810	LysE type translocator
DNQ11_RS12160	PF00378	Enoyl-CoA hydratase/isomerase
DNQ11_RS12170	PF10763	Protein of unknown function (DUF2584)
DNQ11_RS12175	PF12320	Type 5 capsule protein repressor C-terminal domain
DNQ11_RS12175	PF00149	Calcineurin-like phosphoesterase
DNQ11_RS12180	PF13476	AAA domain
DNQ11_RS12195	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS12215	PF07690	Major Facilitator Superfamily
DNQ11_RS12225	PF00106	short chain dehydrogenase
DNQ11_RS12230	PF00425	chorismate binding enzyme
DNQ11_RS12235	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS12235	PF00501	AMP-binding enzyme
DNQ11_RS12240	PF00550	Phosphopantetheine attachment site
DNQ11_RS12240	PF00857	Isochorismatase family
DNQ11_RS12245	PF00501	AMP-binding enzyme
DNQ11_RS12245	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS12245	PF00668	Condensation domain
DNQ11_RS12245	PF00550	Phosphopantetheine attachment site
DNQ11_RS12245	PF00975	Thioesterase domain
DNQ11_RS12250	PF03621	MbtH-like protein
DNQ11_RS12255	PF07690	Major Facilitator Superfamily
DNQ11_RS12270	PF00216	Bacterial DNA-binding protein
DNQ11_RS12280	PF05163	DinB family
DNQ11_RS12285	PF00082	Subtilase family
DNQ11_RS12290	PF01235	Sodium:alanine symporter family
DNQ11_RS12305	PF16291	Domain of unknown function (DUF4937
DNQ11_RS12310	PF00849	RNA pseudouridylate synthase
DNQ11_RS12310	PF01479	S4 domain
DNQ11_RS12315	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
DNQ11_RS12315	PF03129	Anticodon binding domain
DNQ11_RS12315	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
DNQ11_RS12315	PF02824	TGS domain
DNQ11_RS12335	PF12146	Serine aminopeptidase, S33
DNQ11_RS12340	PF07690	Major Facilitator Superfamily
DNQ11_RS12360	PF13649	Methyltransferase domain
DNQ11_RS12405	PF16123	Hydroxyacylglutathione hydrolase C-terminus
DNQ11_RS12405	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS12415	PF03176	MMPL family
DNQ11_RS12425	PF00302	Chloramphenicol acetyltransferase
DNQ11_RS12440	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS12470	PF01593	Flavin containing amine oxidoreductase
DNQ11_RS12480	PF13302	Acetyltransferase (GNAT) domain
DNQ11_RS12490	PF00313	'Cold-shock' DNA-binding domain
DNQ11_RS12560	PF03466	LysR substrate binding domain
DNQ11_RS12560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS12565	PF02774	Semialdehyde dehydrogenase, dimerisation domain
DNQ11_RS12565	PF01118	Semialdehyde dehydrogenase, NAD binding domain
DNQ11_RS12580	PF03466	LysR substrate binding domain
DNQ11_RS12580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS12585	PF03473	MOSC domain
DNQ11_RS12585	PF03475	3-alpha domain
DNQ11_RS12600	PF00005	ABC transporter
DNQ11_RS12600	PF00664	ABC transporter transmembrane region
DNQ11_RS12605	PF00664	ABC transporter transmembrane region
DNQ11_RS12605	PF00005	ABC transporter
DNQ11_RS12620	PF01810	LysE type translocator
DNQ11_RS12625	PF01381	Helix-turn-helix
DNQ11_RS12625	PF07883	Cupin domain
DNQ11_RS12650	PF00890	FAD binding domain
DNQ11_RS12655	PF12680	SnoaL-like domain
DNQ11_RS12655	PF08281	Sigma-70, region 4
DNQ11_RS12655	PF04542	Sigma-70 region 2 
DNQ11_RS12685	PF02638	Glycosyl hydrolase-like 10
DNQ11_RS12700	PF02378	Phosphotransferase system, EIIC 
DNQ11_RS12710	PF03702	Anhydro-N-acetylmuramic acid kinase
DNQ11_RS12715	PF01869	BadF/BadG/BcrA/BcrD ATPase family
DNQ11_RS12720	PF02660	Glycerol-3-phosphate acyltransferase
DNQ11_RS12725	PF00266	Aminotransferase class-V
DNQ11_RS12730	PF00291	Pyridoxal-phosphate dependent enzyme
DNQ11_RS12755	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS12755	PF16123	Hydroxyacylglutathione hydrolase C-terminus
DNQ11_RS12770	PF00270	DEAD/DEAH box helicase
DNQ11_RS12770	PF00271	Helicase conserved C-terminal domain
DNQ11_RS12785	PF17932	Tetracyclin repressor-like, C-terminal domain
DNQ11_RS12785	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS12800	PF12704	MacB-like periplasmic core domain
DNQ11_RS12800	PF02687	FtsX-like permease family
DNQ11_RS12800	PF00005	ABC transporter
DNQ11_RS12805	PF03848	Tellurite resistance protein TehB
DNQ11_RS12805	PF09313	Domain of unknown function (DUF1971)
DNQ11_RS12815	PF08241	Methyltransferase domain
DNQ11_RS12820	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
DNQ11_RS12820	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
DNQ11_RS12820	PF00205	Thiamine pyrophosphate enzyme, central domain
DNQ11_RS12825	PF12802	MarR family
DNQ11_RS12830	PF00300	Histidine phosphatase superfamily (branch 1)
DNQ11_RS12840	PF14171	Toxin SpoIISA, type II toxin-antitoxin system
DNQ11_RS12875	PF07687	Peptidase dimerisation domain
DNQ11_RS12875	PF01546	Peptidase family M20/M25/M40
DNQ11_RS12895	PF04542	Sigma-70 region 2 
DNQ11_RS12895	PF08281	Sigma-70, region 4
DNQ11_RS12905	PF03717	Penicillin-binding Protein dimerisation domain
DNQ11_RS12905	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS12920	PF01569	PAP2 superfamily
DNQ11_RS12925	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS12930	PF07690	Major Facilitator Superfamily
DNQ11_RS12935	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
DNQ11_RS12935	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
DNQ11_RS12940	PF00294	pfkB family carbohydrate kinase
DNQ11_RS12945	PF00171	Aldehyde dehydrogenase family
DNQ11_RS12950	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
DNQ11_RS12950	PF00205	Thiamine pyrophosphate enzyme, central domain
DNQ11_RS12950	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
DNQ11_RS12955	PF01261	Xylose isomerase-like TIM barrel
DNQ11_RS12960	PF01116	Fructose-bisphosphate aldolase class-II
DNQ11_RS12965	PF04962	KduI/IolB family
DNQ11_RS12990	PF18801	response regulator aspartate phosphatase H, N terminal
DNQ11_RS12995	PF01381	Helix-turn-helix
DNQ11_RS13010	PF02557	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS13020	PF00395	S-layer homology domain
DNQ11_RS13020	PF01520	N-acetylmuramoyl-L-alanine amidase
DNQ11_RS13030	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS13035	PF16326	ABC transporter C-terminal domain
DNQ11_RS13035	PF00005	ABC transporter
DNQ11_RS13045	PF00990	Diguanylate cyclase, GGDEF domain
DNQ11_RS13045	PF00563	EAL domain
DNQ11_RS13045	PF03707	Bacterial signalling protein N terminal repeat
DNQ11_RS13050	PF13302	Acetyltransferase (GNAT) domain
DNQ11_RS13065	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS13070	PF00581	Rhodanese-like domain
DNQ11_RS13085	PF00005	ABC transporter
DNQ11_RS13095	PF08359	YsiA-like protein, C-terminal region
DNQ11_RS13095	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS13115	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
DNQ11_RS13115	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
DNQ11_RS13115	PF02770	Acyl-CoA dehydrogenase, middle domain
DNQ11_RS13120	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
DNQ11_RS13120	PF00289	Biotin carboxylase, N-terminal domain
DNQ11_RS13120	PF02785	Biotin carboxylase C-terminal domain
DNQ11_RS13125	PF00364	Biotin-requiring enzyme
DNQ11_RS13130	PF00682	HMGL-like
DNQ11_RS13135	PF00378	Enoyl-CoA hydratase/isomerase
DNQ11_RS13140	PF01039	Carboxyl transferase domain
DNQ11_RS13145	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS13145	PF00501	AMP-binding enzyme
DNQ11_RS13145	PF16177	Acetyl-coenzyme A synthetase N-terminus
DNQ11_RS13155	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS13160	PF00485	Phosphoribulokinase / Uridine kinase family
DNQ11_RS13170	PF05163	DinB family
DNQ11_RS13175	PF00768	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS13175	PF07943	Penicillin-binding protein 5, C-terminal domain
DNQ11_RS13180	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS13180	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS13185	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS13185	PF00072	Response regulator receiver domain
DNQ11_RS13190	PF01966	HD domain
DNQ11_RS13195	PF13021	Domain of unknown function (DUF3885)
DNQ11_RS13200	PF01048	Phosphorylase superfamily
DNQ11_RS13240	PF17755	UvrA DNA-binding domain
DNQ11_RS13240	PF17760	UvrA interaction domain
DNQ11_RS13240	PF17755	UvrA DNA-binding domain
DNQ11_RS13240	PF17760	UvrA interaction domain
DNQ11_RS13255	PF00144	Beta-lactamase
DNQ11_RS13260	PF00376	MerR family regulatory protein
DNQ11_RS13260	PF09278	MerR, DNA binding
DNQ11_RS13265	PF07690	Major Facilitator Superfamily
DNQ11_RS13285	PF01636	Phosphotransferase enzyme family
DNQ11_RS13290	PF12833	Helix-turn-helix domain
DNQ11_RS13305	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS13305	PF00155	Aminotransferase class I and II
DNQ11_RS13320	PF00107	Zinc-binding dehydrogenase
DNQ11_RS13320	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS13350	PF07486	Cell Wall Hydrolase
DNQ11_RS13365	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS13365	PF00072	Response regulator receiver domain
DNQ11_RS13380	PF12848	ABC transporter
DNQ11_RS13380	PF00005	ABC transporter
DNQ11_RS13395	PF00005	ABC transporter
DNQ11_RS13420	PF01842	ACT domain
DNQ11_RS13420	PF00742	Homoserine dehydrogenase
DNQ11_RS13420	PF03447	Homoserine dehydrogenase, NAD binding domain
DNQ11_RS13425	PF00155	Aminotransferase class I and II
DNQ11_RS13425	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS13430	PF07478	D-ala D-ala ligase C-terminus
DNQ11_RS13430	PF01820	D-ala D-ala ligase N-terminus
DNQ11_RS13435	PF03070	TENA/THI-4/PQQC family
DNQ11_RS13530	PF00067	Cytochrome P450
DNQ11_RS13540	PF00132	Bacterial transferase hexapeptide (six repeats)
DNQ11_RS13545	PF07561	Domain of Unknown Function (DUF1540)
DNQ11_RS13555	PF00067	Cytochrome P450
DNQ11_RS13575	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS13575	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS13575	PF13426	PAS domain
DNQ11_RS13575	PF13188	PAS domain
DNQ11_RS13575	PF00989	PAS fold
DNQ11_RS13580	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS13580	PF03717	Penicillin-binding Protein dimerisation domain
DNQ11_RS13585	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
DNQ11_RS13590	PF01177	Asp/Glu/Hydantoin racemase
DNQ11_RS13595	PF07155	ECF-type riboflavin transporter, S component
DNQ11_RS13600	PF00005	ABC transporter
DNQ11_RS13600	PF12558	ATP-binding cassette cobalt transporter
DNQ11_RS13615	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS13615	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS13625	PF04229	GrpB protein
DNQ11_RS13630	PF00107	Zinc-binding dehydrogenase
DNQ11_RS13630	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS13635	PF03793	PASTA domain
DNQ11_RS13635	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS13635	PF03717	Penicillin-binding Protein dimerisation domain
DNQ11_RS13645	PF00144	Beta-lactamase
DNQ11_RS13645	PF11954	Domain of unknown function (DUF3471)
DNQ11_RS13680	PF01965	DJ-1/PfpI family
DNQ11_RS13700	PF00144	Beta-lactamase
DNQ11_RS13720	PF07690	Major Facilitator Superfamily
DNQ11_RS13740	PF03009	Glycerophosphoryl diester phosphodiesterase family
DNQ11_RS13760	PF00892	EamA-like transporter family
DNQ11_RS13765	PF01270	Glycosyl hydrolases family 8
DNQ11_RS13780	PF00293	NUDIX domain
DNQ11_RS13790	PF00144	Beta-lactamase
DNQ11_RS13800	PF07690	Major Facilitator Superfamily
DNQ11_RS13815	PF00293	NUDIX domain
DNQ11_RS13815	PF09297	NADH pyrophosphatase zinc ribbon domain
DNQ11_RS13820	PF02768	DNA polymerase III beta subunit, C-terminal domain
DNQ11_RS13820	PF00712	DNA polymerase III beta subunit, N-terminal domain
DNQ11_RS13820	PF02767	DNA polymerase III beta subunit, central domain
DNQ11_RS13825	PF00293	NUDIX domain
DNQ11_RS13840	PF12706	Beta-lactamase superfamily domain
DNQ11_RS13860	PF09234	Domain of unknown function (DUF1963)
DNQ11_RS13895	PF08000	Bacterial PH domain
DNQ11_RS13905	PF12867	DinB superfamily
DNQ11_RS13920	PF02673	Bacitracin resistance protein BacA
DNQ11_RS13930	PF01541	GIY-YIG catalytic domain
DNQ11_RS13975	PF01266	FAD dependent oxidoreductase
DNQ11_RS14000	PF13419	Haloacid dehalogenase-like hydrolase
DNQ11_RS14020	PF00282	Pyridoxal-dependent decarboxylase conserved domain
DNQ11_RS14025	PF00550	Phosphopantetheine attachment site
DNQ11_RS14025	PF00668	Condensation domain
DNQ11_RS14025	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS14025	PF00501	AMP-binding enzyme
DNQ11_RS14035	PF00128	Alpha amylase, catalytic domain
DNQ11_RS14035	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
DNQ11_RS14035	PF03714	Bacterial pullanase-associated domain
DNQ11_RS14040	PF07504	Fungalysin/Thermolysin Propeptide Motif
DNQ11_RS14040	PF03413	Peptidase propeptide and YPEB domain
DNQ11_RS14040	PF01447	Thermolysin metallopeptidase, catalytic domain
DNQ11_RS14040	PF02868	Thermolysin metallopeptidase, alpha-helical domain
DNQ11_RS14060	PF00344	SecY translocase
DNQ11_RS14065	PF08299	Bacterial dnaA protein helix-turn-helix
DNQ11_RS14065	PF11638	DnaA N-terminal domain
DNQ11_RS14065	PF00308	Bacterial dnaA  protein
DNQ11_RS14070	PF00892	EamA-like transporter family
DNQ11_RS14075	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS14075	PF00155	Aminotransferase class I and II
DNQ11_RS14080	PF00561	alpha/beta hydrolase fold
DNQ11_RS14105	PF06081	Aromatic acid exporter family member 1
DNQ11_RS14120	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
DNQ11_RS14125	PF03413	Peptidase propeptide and YPEB domain
DNQ11_RS14125	PF14620	YpeB sporulation
DNQ11_RS14130	PF07486	Cell Wall Hydrolase
DNQ11_RS14130	PF01471	Putative peptidoglycan binding domain
DNQ11_RS14145	PF03301	Tryptophan 2,3-dioxygenase
DNQ11_RS14150	PF04199	Putative cyclase
DNQ11_RS14155	PF00266	Aminotransferase class-V
DNQ11_RS14160	PF08359	YsiA-like protein, C-terminal region
DNQ11_RS14160	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS14165	PF00293	NUDIX domain
DNQ11_RS14165	PF13344	Haloacid dehalogenase-like hydrolase
DNQ11_RS14195	PF00158	Sigma-54 interaction domain
DNQ11_RS14195	PF02954	Bacterial regulatory protein, Fis family
DNQ11_RS14195	PF01590	GAF domain
DNQ11_RS14210	PF13302	Acetyltransferase (GNAT) domain
DNQ11_RS14215	PF08220	DeoR-like helix-turn-helix domain
DNQ11_RS14215	PF00455	DeoR C terminal sensor domain
DNQ11_RS14230	PF00403	Heavy-metal-associated domain
DNQ11_RS14230	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS14230	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
DNQ11_RS14235	PF02082	Transcriptional regulator
DNQ11_RS14255	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
DNQ11_RS14255	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS14260	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
DNQ11_RS14260	PF02817	e3 binding domain
DNQ11_RS14260	PF00364	Biotin-requiring enzyme
DNQ11_RS14265	PF02780	Transketolase, C-terminal domain
DNQ11_RS14265	PF02779	Transketolase, pyrimidine binding domain
DNQ11_RS14270	PF00676	Dehydrogenase E1 component
DNQ11_RS14280	PF00106	short chain dehydrogenase
DNQ11_RS14285	PF13673	Acetyltransferase (GNAT) domain
DNQ11_RS14285	PF04229	GrpB protein
DNQ11_RS14320	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS14325	PF00571	CBS domain
DNQ11_RS14325	PF00005	ABC transporter
DNQ11_RS14330	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
DNQ11_RS14335	PF00574	Clp protease
DNQ11_RS14350	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
DNQ11_RS14355	PF13673	Acetyltransferase (GNAT) domain
DNQ11_RS14360	PF18416	N-acetylglucosamine binding protein domain 2
DNQ11_RS14360	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
DNQ11_RS14375	PF10990	Protein of unknown function (DUF2809)
DNQ11_RS14405	PF13567	Domain of unknown function (DUF4131)
DNQ11_RS14405	PF03772	Competence protein
DNQ11_RS14405	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS14455	PF13538	UvrD-like helicase C-terminal domain
DNQ11_RS14470	PF06094	Gamma-glutamyl cyclotransferase, AIG2-like
DNQ11_RS14475	PF00270	DEAD/DEAH box helicase
DNQ11_RS14475	PF00271	Helicase conserved C-terminal domain
DNQ11_RS14475	PF00570	HRDC domain
DNQ11_RS14475	PF09382	RQC domain
DNQ11_RS14475	PF16124	RecQ zinc-binding
DNQ11_RS14525	PF02833	DHHA2 domain
DNQ11_RS14525	PF01368	DHH family
DNQ11_RS14530	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
DNQ11_RS14530	PF18416	N-acetylglucosamine binding protein domain 2
DNQ11_RS14545	PF02627	Carboxymuconolactone decarboxylase family
DNQ11_RS14550	PF01235	Sodium:alanine symporter family
DNQ11_RS14555	PF00171	Aldehyde dehydrogenase family
DNQ11_RS14560	PF00701	Dihydrodipicolinate synthetase family
DNQ11_RS14565	PF05544	Proline racemase
DNQ11_RS14570	PF05544	Proline racemase
DNQ11_RS14575	PF01266	FAD dependent oxidoreductase
DNQ11_RS14580	PF13188	PAS domain
DNQ11_RS14580	PF02954	Bacterial regulatory protein, Fis family
DNQ11_RS14580	PF00158	Sigma-54 interaction domain
DNQ11_RS14595	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS14595	PF04324	BFD-like [2Fe-2S] binding domain
DNQ11_RS14610	PF08876	Domain of unknown function (DUF1836)
DNQ11_RS14615	PF09335	SNARE associated Golgi protein
DNQ11_RS14630	PF04914	DltD protein
DNQ11_RS14635	PF13302	Acetyltransferase (GNAT) domain
DNQ11_RS14635	PF00117	Glutamine amidotransferase class-I
DNQ11_RS14635	PF00958	GMP synthase C terminal domain
DNQ11_RS14635	PF13673	Acetyltransferase (GNAT) domain
DNQ11_RS14635	PF03352	Methyladenine glycosylase
DNQ11_RS14640	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS14645	PF00877	NlpC/P60 family
DNQ11_RS14645	PF18348	Bacterial dipeptidyl-peptidase Sh3 domain
DNQ11_RS14650	PF13378	Enolase C-terminal domain-like
DNQ11_RS14650	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
DNQ11_RS14675	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
DNQ11_RS14705	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
DNQ11_RS14705	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
DNQ11_RS14710	PF16736	Single Cache-like 
DNQ11_RS14710	PF00989	PAS fold
DNQ11_RS14710	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS14710	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS14735	PF01048	Phosphorylase superfamily
DNQ11_RS14745	PF03808	Glycosyl transferase WecB/TagA/CpsF family
DNQ11_RS14750	PF08439	Oligopeptidase F
DNQ11_RS14750	PF01432	Peptidase family M3
DNQ11_RS14765	PF02645	Uncharacterised protein, DegV family COG1307
DNQ11_RS14790	PF07690	Major Facilitator Superfamily
DNQ11_RS14800	PF04519	Polymer-forming cytoskeletal
DNQ11_RS14805	PF13171	Protein of unknown function (DUF4004)
DNQ11_RS14810	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS14810	PF12793	Sugar transport-related sRNA regulator N-term
DNQ11_RS14815	PF07690	Major Facilitator Superfamily
DNQ11_RS14835	PF04226	Transglycosylase associated protein
DNQ11_RS14840	PF01156	Inosine-uridine preferring nucleoside hydrolase
DNQ11_RS14850	PF08241	Methyltransferase domain
DNQ11_RS14890	PF00155	Aminotransferase class I and II
DNQ11_RS14895	PF07977	FabA-like domain
DNQ11_RS14900	PF03630	Fumble 
DNQ11_RS14920	PF00005	ABC transporter
DNQ11_RS14970	PF01594	AI-2E family transporter
DNQ11_RS14985	PF00296	Luciferase-like monooxygenase
DNQ11_RS14990	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS14995	PF09084	NMT1/THI5 like
DNQ11_RS15000	PF00005	ABC transporter
DNQ11_RS15020	PF00293	NUDIX domain
DNQ11_RS15020	PF09297	NADH pyrophosphatase zinc ribbon domain
DNQ11_RS15040	PF02522	Aminoglycoside 3-N-acetyltransferase
DNQ11_RS15070	PF13536	Putative multidrug resistance efflux transporter
DNQ11_RS15075	PF12867	DinB superfamily
DNQ11_RS15095	PF08713	DNA alkylation repair enzyme
DNQ11_RS15110	PF01522	Polysaccharide deacetylase
DNQ11_RS15120	PF03741	Integral membrane protein TerC family
DNQ11_RS15125	PF00884	Sulfatase
DNQ11_RS15135	PF12848	ABC transporter
DNQ11_RS15135	PF00005	ABC transporter
DNQ11_RS15145	PF03176	MMPL family
DNQ11_RS15150	PF03176	MMPL family
DNQ11_RS15155	PF03176	MMPL family
DNQ11_RS15160	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS15160	PF16295	Tetracyclin repressor-like, C-terminal domain
DNQ11_RS15170	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
DNQ11_RS15175	PF02153	Prephenate dehydrogenase
DNQ11_RS15175	PF01842	ACT domain
DNQ11_RS15180	PF00155	Aminotransferase class I and II
DNQ11_RS15185	PF01264	Chorismate synthase
DNQ11_RS15195	PF01817	Chorismate mutase type II
DNQ11_RS15195	PF00793	DAHP synthetase I family
DNQ11_RS15225	PF01636	Phosphotransferase enzyme family
DNQ11_RS15240	PF06725	3D domain
DNQ11_RS15240	PF01476	LysM domain
DNQ11_RS15255	PF04542	Sigma-70 region 2 
DNQ11_RS15255	PF08281	Sigma-70, region 4
DNQ11_RS15275	PF06039	Malate:quinone oxidoreductase (Mqo)
DNQ11_RS15280	PF13407	Periplasmic binding protein domain
DNQ11_RS15285	PF02653	Branched-chain amino acid transport system / permease component
DNQ11_RS15290	PF02653	Branched-chain amino acid transport system / permease component
DNQ11_RS15295	PF00005	ABC transporter
DNQ11_RS15300	PF04198	Putative sugar-binding domain
DNQ11_RS15300	PF00325	Bacterial regulatory proteins, crp family
DNQ11_RS15315	PF01791	DeoC/LacD family aldolase
DNQ11_RS15335	PF03992	Antibiotic biosynthesis monooxygenase
DNQ11_RS15355	PF01773	Na+ dependent nucleoside transporter N-terminus
DNQ11_RS15355	PF07662	Na+ dependent nucleoside transporter C-terminus
DNQ11_RS15360	PF00171	Aldehyde dehydrogenase family
DNQ11_RS15365	PF01472	PUA domain
DNQ11_RS15365	PF00696	Amino acid kinase family
DNQ11_RS15375	PF03807	NADP oxidoreductase coenzyme F420-dependent
DNQ11_RS15375	PF14748	Pyrroline-5-carboxylate reductase dimerisation
DNQ11_RS15380	PF01546	Peptidase family M20/M25/M40
DNQ11_RS15385	PF09339	IclR helix-turn-helix domain
DNQ11_RS15385	PF01614	Bacterial transcriptional regulator
DNQ11_RS15395	PF00324	Amino acid permease
DNQ11_RS15400	PF01139	tRNA-splicing ligase RtcB
DNQ11_RS15405	PF00487	Fatty acid desaturase
DNQ11_RS15410	PF00245	Alkaline phosphatase
DNQ11_RS15415	PF11188	Protein of unknown function (DUF2975)
DNQ11_RS15420	PF13443	Cro/C1-type HTH DNA-binding domain
DNQ11_RS15435	PF10086	YhfC intramembrane metalloprotease
DNQ11_RS15445	PF04397	LytTr DNA-binding domain
DNQ11_RS15445	PF00072	Response regulator receiver domain
DNQ11_RS15455	PF13302	Acetyltransferase (GNAT) domain
DNQ11_RS15460	PF12681	Glyoxalase-like domain
DNQ11_RS15480	PF17863	AAA lid domain
DNQ11_RS15480	PF07726	ATPase family associated with various cellular activities (AAA)
DNQ11_RS15495	PF07690	Major Facilitator Superfamily
DNQ11_RS15505	PF00535	Glycosyl transferase family 2
DNQ11_RS15520	PF00535	Glycosyl transferase family 2
DNQ11_RS15530	PF00535	Glycosyl transferase family 2
DNQ11_RS15540	PF00202	Aminotransferase class-III
DNQ11_RS15545	PF06628	Catalase-related immune-responsive
DNQ11_RS15545	PF00199	Catalase
DNQ11_RS15560	PF00144	Beta-lactamase
DNQ11_RS15580	PF07726	ATPase family associated with various cellular activities (AAA)
DNQ11_RS15580	PF17863	AAA lid domain
DNQ11_RS15590	PF00881	Nitroreductase family
DNQ11_RS15595	PF01047	MarR family
DNQ11_RS15605	PF00009	Elongation factor Tu GTP binding domain
DNQ11_RS15605	PF00679	Elongation factor G C-terminus
DNQ11_RS15605	PF14492	Elongation Factor G, domain II
DNQ11_RS15605	PF03764	Elongation factor G, domain IV
DNQ11_RS15615	PF00293	NUDIX domain
DNQ11_RS15630	PF00005	ABC transporter
DNQ11_RS15635	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS15650	PF00005	ABC transporter
DNQ11_RS15650	PF12704	MacB-like periplasmic core domain
DNQ11_RS15650	PF02687	FtsX-like permease family
DNQ11_RS15675	PF12833	Helix-turn-helix domain
DNQ11_RS15680	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS15695	PF00892	EamA-like transporter family
DNQ11_RS15700	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS15700	PF00155	Aminotransferase class I and II
DNQ11_RS15705	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
DNQ11_RS15710	PF13031	Protein of unknown function (DUF3892)
DNQ11_RS15720	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS15720	PF00672	HAMP domain
DNQ11_RS15725	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS15725	PF00072	Response regulator receiver domain
DNQ11_RS15730	PF00561	alpha/beta hydrolase fold
DNQ11_RS15760	PF01925	Sulfite exporter TauE/SafE
DNQ11_RS15765	PF13302	Acetyltransferase (GNAT) domain
DNQ11_RS15770	PF00324	Amino acid permease
DNQ11_RS15780	PF08713	DNA alkylation repair enzyme
DNQ11_RS15785	PF10898	Protein of unknown function (DUF2716)
DNQ11_RS15805	PF00293	NUDIX domain
DNQ11_RS15815	PF10502	Signal peptidase, peptidase S26 
DNQ11_RS15820	PF03717	Penicillin-binding Protein dimerisation domain
DNQ11_RS15820	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS15830	PF02146	Sir2 family
DNQ11_RS15835	PF01470	Pyroglutamyl peptidase
DNQ11_RS15865	PF03746	LamB/YcsF family
DNQ11_RS15870	PF02626	Carboxyltransferase domain, subdomain A and B 
DNQ11_RS15875	PF02682	Carboxyltransferase domain, subdomain C and D
DNQ11_RS15880	PF09339	IclR helix-turn-helix domain
DNQ11_RS15880	PF01614	Bacterial transcriptional regulator
DNQ11_RS15885	PF10502	Signal peptidase, peptidase S26 
DNQ11_RS15890	PF03932	CutC family
DNQ11_RS15895	PF07454	Stage II sporulation protein P (SpoIIP)
DNQ11_RS15910	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
DNQ11_RS15910	PF02770	Acyl-CoA dehydrogenase, middle domain
DNQ11_RS15910	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
DNQ11_RS15930	PF07670	Nucleoside recognition
DNQ11_RS15945	PF02915	Rubrerythrin
DNQ11_RS15955	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS15960	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
DNQ11_RS15960	PF00391	PEP-utilising enzyme, mobile domain
DNQ11_RS15970	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS15985	PF07875	Coat F domain
DNQ11_RS15995	PF08892	YqcI/YcgG family
DNQ11_RS16000	PF01810	LysE type translocator
DNQ11_RS16015	PF00269	Small, acid-soluble spore proteins, alpha/beta type
DNQ11_RS16020	PF10710	Protein of unknown function (DUF2512)
DNQ11_RS16025	PF11553	Protein of unknown function (DUF3231)
DNQ11_RS16030	PF00269	Small, acid-soluble spore proteins, alpha/beta type
DNQ11_RS16035	PF00107	Zinc-binding dehydrogenase
DNQ11_RS16035	PF13823	Alcohol dehydrogenase GroES-associated
DNQ11_RS16035	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS16050	PF10415	Fumarase C C-terminus
DNQ11_RS16050	PF00206	Lyase
DNQ11_RS16055	PF17763	Glutaminase/Asparaginase C-terminal domain
DNQ11_RS16055	PF00710	Asparaginase, N-terminal
DNQ11_RS16060	PF01381	Helix-turn-helix
DNQ11_RS16070	PF02151	UvrB/uvrC motif
DNQ11_RS16070	PF01541	GIY-YIG catalytic domain
DNQ11_RS16070	PF12826	Helix-hairpin-helix motif
DNQ11_RS16070	PF08459	UvrC Helix-hairpin-helix N-terminal
DNQ11_RS16075	PF13520	Amino acid permease
DNQ11_RS16080	PF05525	Branched-chain amino acid transport protein
DNQ11_RS16085	PF14748	Pyrroline-5-carboxylate reductase dimerisation
DNQ11_RS16085	PF03807	NADP oxidoreductase coenzyme F420-dependent
DNQ11_RS16090	PF13564	DoxX-like family
DNQ11_RS16095	PF00390	Malic enzyme, N-terminal domain
DNQ11_RS16095	PF03949	Malic enzyme, NAD binding domain
DNQ11_RS16110	PF03845	Spore germination protein
DNQ11_RS16115	PF03323	Bacillus/Clostridium GerA spore germination protein
DNQ11_RS16125	PF00072	Response regulator receiver domain
DNQ11_RS16125	PF08664	YcbB domain
DNQ11_RS16135	PF04960	Glutaminase
DNQ11_RS16140	PF01235	Sodium:alanine symporter family
DNQ11_RS16175	PF06628	Catalase-related immune-responsive
DNQ11_RS16175	PF00199	Catalase
DNQ11_RS16180	PF00561	alpha/beta hydrolase fold
DNQ11_RS16185	PF00857	Isochorismatase family
DNQ11_RS16205	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS16205	PF03466	LysR substrate binding domain
DNQ11_RS16215	PF01047	MarR family
DNQ11_RS16235	PF11181	Heat induced stress protein YflT
DNQ11_RS16255	PF03073	TspO/MBR family
DNQ11_RS16260	PF03441	FAD binding domain of DNA photolyase
DNQ11_RS16260	PF00875	DNA photolyase
DNQ11_RS16270	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
DNQ11_RS16275	PF00361	Proton-conducting membrane transporter
DNQ11_RS16275	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
DNQ11_RS16280	PF10057	Uncharacterized conserved protein (DUF2294)
DNQ11_RS16300	PF01040	UbiA prenyltransferase family
DNQ11_RS16305	PF00561	alpha/beta hydrolase fold
DNQ11_RS16315	PF01297	Zinc-uptake complex component A periplasmic
DNQ11_RS16320	PF00950	ABC 3 transport family
DNQ11_RS16325	PF00005	ABC transporter
DNQ11_RS16350	PF01451	Low molecular weight phosphotyrosine protein phosphatase
DNQ11_RS16355	PF01758	Sodium Bile acid symporter family
DNQ11_RS16360	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS16365	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS16380	PF00012	Hsp70 protein
DNQ11_RS16400	PF01037	Lrp/AsnC ligand binding domain
DNQ11_RS16415	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS16425	PF01609	Transposase DDE domain
DNQ11_RS16440	PF02805	Metal binding domain of Ada
DNQ11_RS16440	PF12833	Helix-turn-helix domain
DNQ11_RS16450	PF00144	Beta-lactamase
DNQ11_RS16475	PF12802	MarR family
DNQ11_RS16480	PF00175	Oxidoreductase NAD-binding domain 
DNQ11_RS16480	PF00067	Cytochrome P450
DNQ11_RS16480	PF00258	Flavodoxin
DNQ11_RS16480	PF00667	FAD binding domain
DNQ11_RS16490	PF07690	Major Facilitator Superfamily
DNQ11_RS16520	PF00072	Response regulator receiver domain
DNQ11_RS16520	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS16525	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS16525	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS16525	PF00672	HAMP domain
DNQ11_RS16560	PF00291	Pyridoxal-phosphate dependent enzyme
DNQ11_RS16590	PF01381	Helix-turn-helix
DNQ11_RS16605	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS16610	PF01073	3-beta hydroxysteroid dehydrogenase/isomerase family
DNQ11_RS16620	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
DNQ11_RS16620	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
DNQ11_RS16625	PF04072	Leucine carboxyl methyltransferase
DNQ11_RS16640	PF00005	ABC transporter
DNQ11_RS16645	PF02687	FtsX-like permease family
DNQ11_RS16660	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS16660	PF00672	HAMP domain
DNQ11_RS16660	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS16665	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS16665	PF00072	Response regulator receiver domain
DNQ11_RS16675	PF01047	MarR family
DNQ11_RS16685	PF04299	Putative FMN-binding domain
DNQ11_RS16690	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS16690	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS16695	PF07690	Major Facilitator Superfamily
DNQ11_RS16700	PF02589	LUD domain
DNQ11_RS16705	PF13183	4Fe-4S dicluster domain
DNQ11_RS16705	PF02589	LUD domain
DNQ11_RS16705	PF11870	Domain of unknown function (DUF3390)
DNQ11_RS16710	PF02754	Cysteine-rich domain
DNQ11_RS16715	PF03466	LysR substrate binding domain
DNQ11_RS16715	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS16725	PF02016	LD-carboxypeptidase N-terminal domain
DNQ11_RS16725	PF17676	LD-carboxypeptidase C-terminal domain
DNQ11_RS16755	PF07690	Major Facilitator Superfamily
DNQ11_RS16760	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
DNQ11_RS16760	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
DNQ11_RS16765	PF05116	Sucrose-6F-phosphate phosphohydrolase
DNQ11_RS16775	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS16780	PF18801	response regulator aspartate phosphatase H, N terminal
DNQ11_RS16800	PF00817	impB/mucB/samB family
DNQ11_RS16800	PF11798	IMS family HHH motif
DNQ11_RS16800	PF11799	impB/mucB/samB family C-terminal domain
DNQ11_RS16815	PF02743	Cache domain
DNQ11_RS16815	PF00672	HAMP domain
DNQ11_RS16815	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS16830	PF01554	MatE
DNQ11_RS16845	PF01752	Collagenase
DNQ11_RS16845	PF08453	Peptidase family M9 N-terminal
DNQ11_RS16845	PF18496	Collagenase G catalytic helper subdomain
DNQ11_RS16850	PF02661	Fic/DOC family
DNQ11_RS16855	PF07690	Major Facilitator Superfamily
DNQ11_RS16860	PF16859	Tetracyclin repressor-like, C-terminal domain
DNQ11_RS16860	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS16870	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS16880	PF03313	Serine dehydratase alpha chain
DNQ11_RS16885	PF01842	ACT domain
DNQ11_RS16885	PF03315	Serine dehydratase beta chain
DNQ11_RS16900	PF00202	Aminotransferase class-III
DNQ11_RS16905	PF01300	Telomere recombination
DNQ11_RS16905	PF17788	HypF Kae1-like domain
DNQ11_RS16905	PF07503	HypF finger
DNQ11_RS16905	PF00708	Acylphosphatase
DNQ11_RS16910	PF02769	AIR synthase related protein, C-terminal domain
DNQ11_RS16910	PF00586	AIR synthase related protein, N-terminal domain
DNQ11_RS16915	PF00857	Isochorismatase family
DNQ11_RS16920	PF01037	Lrp/AsnC ligand binding domain
DNQ11_RS16925	PF13520	Amino acid permease
DNQ11_RS16945	PF01842	ACT domain
DNQ11_RS16945	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
DNQ11_RS16945	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
DNQ11_RS16950	PF00266	Aminotransferase class-V
DNQ11_RS16965	PF08281	Sigma-70, region 4
DNQ11_RS16965	PF04542	Sigma-70 region 2 
DNQ11_RS16980	PF07883	Cupin domain
DNQ11_RS16990	PF12833	Helix-turn-helix domain
DNQ11_RS16990	PF01497	Periplasmic binding protein
DNQ11_RS17000	PF01804	Penicillin amidase
DNQ11_RS17040	PF14044	NETI protein
DNQ11_RS17045	PF07690	Major Facilitator Superfamily
DNQ11_RS17050	PF12697	Alpha/beta hydrolase family
DNQ11_RS17055	PF01047	MarR family
DNQ11_RS17060	PF07690	Major Facilitator Superfamily
DNQ11_RS17075	PF12679	ABC-2 family transporter protein
DNQ11_RS17085	PF13396	Phospholipase_D-nuclease N-terminal
DNQ11_RS17095	PF17314	Family of unknown function (DUF5360)
DNQ11_RS17100	PF00893	Small Multidrug Resistance protein
DNQ11_RS17105	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS17110	PF17440	Thiol-activated cytolysin beta sandwich domain
DNQ11_RS17110	PF01289	Thiol-activated cytolysin
DNQ11_RS17115	PF02667	Short chain fatty acid transporter
DNQ11_RS17125	PF02525	Flavodoxin-like fold
DNQ11_RS17145	PF14256	YwiC-like protein
DNQ11_RS17155	PF00005	ABC transporter
DNQ11_RS17160	PF02361	Cobalt transport protein
DNQ11_RS17175	PF03737	Aldolase/RraA
DNQ11_RS17180	PF03606	C4-dicarboxylate anaerobic carrier
DNQ11_RS17185	PF04231	Endonuclease I
DNQ11_RS17200	PF01381	Helix-turn-helix
DNQ11_RS17205	PF02660	Glycerol-3-phosphate acyltransferase
DNQ11_RS17210	PF04073	Aminoacyl-tRNA editing domain
DNQ11_RS17215	PF13393	Histidyl-tRNA synthetase
DNQ11_RS17215	PF03129	Anticodon binding domain
DNQ11_RS17230	PF01638	HxlR-like helix-turn-helix
DNQ11_RS17235	PF00881	Nitroreductase family
DNQ11_RS17245	PF02887	Pyruvate kinase, alpha/beta domain
DNQ11_RS17245	PF00224	Pyruvate kinase, barrel domain
DNQ11_RS17245	PF00391	PEP-utilising enzyme, mobile domain
DNQ11_RS17270	PF00005	ABC transporter
DNQ11_RS17295	PF13419	Haloacid dehalogenase-like hydrolase
DNQ11_RS17305	PF13350	Tyrosine phosphatase family
DNQ11_RS17330	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS17335	PF00480	ROK family
DNQ11_RS17340	PF07690	Major Facilitator Superfamily
DNQ11_RS17345	PF14602	Hexapeptide repeat of succinyl-transferase
DNQ11_RS17345	PF12464	Maltose acetyltransferase 
DNQ11_RS17355	PF12704	MacB-like periplasmic core domain
DNQ11_RS17355	PF02687	FtsX-like permease family
DNQ11_RS17355	PF00005	ABC transporter
DNQ11_RS17365	PF00579	tRNA synthetases class I (W and Y)
DNQ11_RS17370	PF13288	DXP reductoisomerase C-terminal domain
DNQ11_RS17370	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
DNQ11_RS17370	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
DNQ11_RS17375	PF01594	AI-2E family transporter
DNQ11_RS17395	PF08241	Methyltransferase domain
DNQ11_RS17405	PF07690	Major Facilitator Superfamily
DNQ11_RS17425	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS17435	PF00571	CBS domain
DNQ11_RS17435	PF03471	Transporter associated domain
DNQ11_RS17435	PF01595	Cyclin M transmembrane N-terminal domain
DNQ11_RS17440	PF13411	MerR HTH family regulatory protein
DNQ11_RS17445	PF00892	EamA-like transporter family
DNQ11_RS17450	PF00805	Pentapeptide repeats (8 copies)
DNQ11_RS17455	PF06906	Protein of unknown function (DUF1272)
DNQ11_RS17465	PF10282	Lactonase, 7-bladed beta-propeller
DNQ11_RS17470	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
DNQ11_RS17470	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
DNQ11_RS17475	PF02447	GntP family permease
DNQ11_RS17480	PF00923	Transaldolase/Fructose-6-phosphate aldolase
DNQ11_RS17485	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
DNQ11_RS17485	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
DNQ11_RS17490	PF02779	Transketolase, pyrimidine binding domain
DNQ11_RS17490	PF02780	Transketolase, C-terminal domain
DNQ11_RS17490	PF00456	Transketolase, thiamine diphosphate binding domain
DNQ11_RS17495	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
DNQ11_RS17495	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
DNQ11_RS17500	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
DNQ11_RS17500	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
DNQ11_RS17505	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS17505	PF00107	Zinc-binding dehydrogenase
DNQ11_RS17510	PF00296	Luciferase-like monooxygenase
DNQ11_RS17520	PF16197	Ketoacyl-synthetase C-terminal extension
DNQ11_RS17520	PF00107	Zinc-binding dehydrogenase
DNQ11_RS17520	PF14765	Polyketide synthase dehydratase
DNQ11_RS17520	PF02801	Beta-ketoacyl synthase, C-terminal domain
DNQ11_RS17520	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS17520	PF00109	Beta-ketoacyl synthase, N-terminal domain
DNQ11_RS17520	PF08659	KR domain
DNQ11_RS17520	PF00550	Phosphopantetheine attachment site
DNQ11_RS17520	PF00698	Acyl transferase domain
DNQ11_RS17530	PF00106	short chain dehydrogenase
DNQ11_RS17535	PF02868	Thermolysin metallopeptidase, alpha-helical domain
DNQ11_RS17535	PF07504	Fungalysin/Thermolysin Propeptide Motif
DNQ11_RS17535	PF03413	Peptidase propeptide and YPEB domain
DNQ11_RS17535	PF01447	Thermolysin metallopeptidase, catalytic domain
DNQ11_RS17555	PF00248	Aldo/keto reductase family
DNQ11_RS17560	PF07690	Major Facilitator Superfamily
DNQ11_RS17575	PF03928	Haem-degrading
DNQ11_RS17580	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS17610	PF03960	ArsC family
DNQ11_RS17620	PF01638	HxlR-like helix-turn-helix
DNQ11_RS17625	PF07702	UTRA domain
DNQ11_RS17625	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS17640	PF01638	HxlR-like helix-turn-helix
DNQ11_RS17645	PF01638	HxlR-like helix-turn-helix
DNQ11_RS17650	PF00248	Aldo/keto reductase family
DNQ11_RS17680	PF02567	Phenazine biosynthesis-like protein
DNQ11_RS17700	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS17700	PF00501	AMP-binding enzyme
DNQ11_RS17710	PF01638	HxlR-like helix-turn-helix
DNQ11_RS17730	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS17740	PF12791	Anti-sigma factor N-terminus
DNQ11_RS17745	PF04542	Sigma-70 region 2 
DNQ11_RS17750	PF00535	Glycosyl transferase family 2
DNQ11_RS17750	PF18674	TarS beta-glycosyltransferase C-terminal domain 1
DNQ11_RS17760	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS17780	PF05656	Protein of unknown function (DUF805)
DNQ11_RS17785	PF01061	ABC-2 type transporter
DNQ11_RS17790	PF13732	Domain of unknown function (DUF4162)
DNQ11_RS17790	PF00005	ABC transporter
DNQ11_RS17810	PF03063	Prismane/CO dehydrogenase family
DNQ11_RS17825	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS17830	PF01183	Glycosyl hydrolases family 25
DNQ11_RS17830	PF01471	Putative peptidoglycan binding domain
DNQ11_RS17855	PF00144	Beta-lactamase
DNQ11_RS17895	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS17900	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS17900	PF00107	Zinc-binding dehydrogenase
DNQ11_RS17905	PF00324	Amino acid permease
DNQ11_RS17910	PF07690	Major Facilitator Superfamily
DNQ11_RS17940	PF02585	GlcNAc-PI de-N-acetylase
DNQ11_RS17945	PF08830	Protein of unknown function (DUF1806)
DNQ11_RS17950	PF03600	Citrate transporter
DNQ11_RS17980	PF01032	FecCD transport family
DNQ11_RS17985	PF01032	FecCD transport family
DNQ11_RS17990	PF05675	Protein of unknown function (DUF817)
DNQ11_RS17995	PF02567	Phenazine biosynthesis-like protein
DNQ11_RS18000	PF13170	Protein of unknown function (DUF4003)
DNQ11_RS18015	PF10901	Protein of unknown function (DUF2690)
DNQ11_RS18025	PF03466	LysR substrate binding domain
DNQ11_RS18025	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS18030	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS18030	PF00107	Zinc-binding dehydrogenase
DNQ11_RS18045	PF00488	MutS domain V
DNQ11_RS18045	PF01713	Smr domain
DNQ11_RS18055	PF00128	Alpha amylase, catalytic domain
DNQ11_RS18055	PF09154	Domain of unknown function (DUF1939)
DNQ11_RS18070	PF00144	Beta-lactamase
DNQ11_RS18080	PF07690	Major Facilitator Superfamily
DNQ11_RS18085	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS18085	PF03466	LysR substrate binding domain
DNQ11_RS18100	PF03009	Glycerophosphoryl diester phosphodiesterase family
DNQ11_RS18120	PF01494	FAD binding domain
DNQ11_RS18125	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS18130	PF00107	Zinc-binding dehydrogenase
DNQ11_RS18130	PF08240	Alcohol dehydrogenase GroES-like domain
DNQ11_RS18135	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
DNQ11_RS18150	PF04299	Putative FMN-binding domain
DNQ11_RS18155	PF04229	GrpB protein
DNQ11_RS18165	PF01758	Sodium Bile acid symporter family
DNQ11_RS18170	PF01565	FAD binding domain 
DNQ11_RS18170	PF02913	FAD linked oxidases, C-terminal domain
DNQ11_RS18200	PF00132	Bacterial transferase hexapeptide (six repeats)
DNQ11_RS18205	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
DNQ11_RS18215	PF00378	Enoyl-CoA hydratase/isomerase
DNQ11_RS18220	PF08453	Peptidase family M9 N-terminal
DNQ11_RS18220	PF18496	Collagenase G catalytic helper subdomain
DNQ11_RS18220	PF01752	Collagenase
DNQ11_RS18225	PF02308	MgtC family
DNQ11_RS18240	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS18245	PF04294	VanW like protein
DNQ11_RS18255	PF13039	Protein of unknown function (DUF3900)
DNQ11_RS18255	PF13037	Domain of unknown function (DUF3898)
DNQ11_RS18275	PF00313	'Cold-shock' DNA-binding domain
DNQ11_RS18285	PF00258	Flavodoxin
DNQ11_RS18295	PF00293	NUDIX domain
DNQ11_RS18305	PF00132	Bacterial transferase hexapeptide (six repeats)
DNQ11_RS18315	PF00106	short chain dehydrogenase
DNQ11_RS18325	PF14698	Argininosuccinate lyase C-terminal
DNQ11_RS18325	PF00206	Lyase
DNQ11_RS18335	PF01156	Inosine-uridine preferring nucleoside hydrolase
DNQ11_RS18340	PF00474	Sodium:solute symporter family
DNQ11_RS18350	PF00171	Aldehyde dehydrogenase family
DNQ11_RS18360	PF14151	YfhD-like protein
DNQ11_RS18365	PF13243	Squalene-hopene cyclase C-terminal domain
DNQ11_RS18365	PF13249	Squalene-hopene cyclase N-terminal domain
DNQ11_RS18370	PF02681	Divergent PAP2 family
DNQ11_RS18375	PF00892	EamA-like transporter family
DNQ11_RS18380	PF06961	Protein of unknown function (DUF1294)
DNQ11_RS18395	PF10609	NUBPL iron-transfer P-loop NTPase
DNQ11_RS18405	PF02391	MoaE protein
DNQ11_RS18410	PF03454	MoeA C-terminal region (domain IV)
DNQ11_RS18410	PF03453	MoeA N-terminal region (domain I and II)
DNQ11_RS18410	PF00994	Probable molybdopterin binding domain
DNQ11_RS18415	PF00899	ThiF family
DNQ11_RS18420	PF01226	Formate/nitrite transporter
DNQ11_RS18430	PF04055	Radical SAM superfamily
DNQ11_RS18430	PF06463	Molybdenum Cofactor Synthesis C
DNQ11_RS18435	PF02634	FdhD/NarQ family
DNQ11_RS18440	PF10057	Uncharacterized conserved protein (DUF2294)
DNQ11_RS18445	PF07849	Protein of unknown function (DUF1641)
DNQ11_RS18450	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
DNQ11_RS18450	PF00037	4Fe-4S binding domain
DNQ11_RS18450	PF00384	Molybdopterin oxidoreductase
DNQ11_RS18450	PF01568	Molydopterin dinucleotide binding domain
DNQ11_RS18450	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
DNQ11_RS18460	PF03323	Bacillus/Clostridium GerA spore germination protein
DNQ11_RS18500	PF08241	Methyltransferase domain
DNQ11_RS18505	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS18510	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS18515	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS18520	PF00375	Sodium:dicarboxylate symporter family
DNQ11_RS18525	PF03816	Cell envelope-related transcriptional attenuator domain
DNQ11_RS18535	PF04542	Sigma-70 region 2 
DNQ11_RS18535	PF08281	Sigma-70, region 4
DNQ11_RS18555	PF13732	Domain of unknown function (DUF4162)
DNQ11_RS18555	PF00005	ABC transporter
DNQ11_RS18565	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
DNQ11_RS18565	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
DNQ11_RS18570	PF03989	DNA gyrase C-terminal domain, beta-propeller
DNQ11_RS18570	PF00521	DNA gyrase/topoisomerase IV, subunit A
DNQ11_RS18575	PF01751	Toprim domain
DNQ11_RS18575	PF00204	DNA gyrase B
DNQ11_RS18575	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS18575	PF00986	DNA gyrase B subunit, carboxyl terminus
DNQ11_RS18585	PF13380	CoA binding domain
DNQ11_RS18590	PF13180	PDZ domain
DNQ11_RS18595	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS18595	PF00072	Response regulator receiver domain
DNQ11_RS18605	PF03477	ATP cone domain
DNQ11_RS18605	PF13597	Anaerobic ribonucleoside-triphosphate reductase
DNQ11_RS18610	PF02660	Glycerol-3-phosphate acyltransferase
DNQ11_RS18615	PF01521	Iron-sulphur cluster biosynthesis
DNQ11_RS18620	PF03061	Thioesterase superfamily
DNQ11_RS18625	PF01476	LysM domain
DNQ11_RS18625	PF00704	Glycosyl hydrolases family 18
DNQ11_RS18635	PF08177	Small acid-soluble spore protein N family
DNQ11_RS18640	PF13040	Fur-regulated basic protein B
DNQ11_RS18645	PF14579	Helix-hairpin-helix motif
DNQ11_RS18645	PF01336	OB-fold nucleic acid binding domain
DNQ11_RS18645	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
DNQ11_RS18645	PF07733	Bacterial DNA polymerase III alpha NTPase domain
DNQ11_RS18645	PF11490	DNA polymerase III polC-type N-terminus II
DNQ11_RS18645	PF00929	Exonuclease
DNQ11_RS18645	PF02811	PHP domain
DNQ11_RS18655	PF00578	AhpC/TSA family
DNQ11_RS18665	PF03412	Peptidase C39 family
DNQ11_RS18665	PF00664	ABC transporter transmembrane region
DNQ11_RS18665	PF00005	ABC transporter
DNQ11_RS18670	PF00694	Aconitase C-terminal domain
DNQ11_RS18670	PF00330	Aconitase family (aconitate hydratase)
DNQ11_RS18680	PF01522	Polysaccharide deacetylase
DNQ11_RS18710	PF02272	DHHA1 domain
DNQ11_RS18710	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
DNQ11_RS18710	PF01411	tRNA synthetases class II (A)
DNQ11_RS18715	PF00293	NUDIX domain
DNQ11_RS18715	PF13344	Haloacid dehalogenase-like hydrolase
DNQ11_RS18725	PF02803	Thiolase, C-terminal domain
DNQ11_RS18725	PF00108	Thiolase, N-terminal domain
DNQ11_RS18730	PF00501	AMP-binding enzyme
DNQ11_RS18730	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS18735	PF02632	BioY family
DNQ11_RS18740	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS18740	PF00501	AMP-binding enzyme
DNQ11_RS18765	PF05532	CsbD-like
DNQ11_RS18795	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS18795	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS18810	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS18810	PF13188	PAS domain
DNQ11_RS18810	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS18810	PF13426	PAS domain
DNQ11_RS18810	PF00989	PAS fold
DNQ11_RS18815	PF01738	Dienelactone hydrolase family
DNQ11_RS18820	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS18825	PF00474	Sodium:solute symporter family
DNQ11_RS18830	PF01645	Conserved region in glutamate synthase
DNQ11_RS18835	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
DNQ11_RS18840	PF02559	CarD-like/TRCF domain
DNQ11_RS18845	PF00491	Arginase family
DNQ11_RS18850	PF01979	Amidohydrolase family
DNQ11_RS18855	PF17391	Urocanase N-terminal domain
DNQ11_RS18855	PF01175	Urocanase Rossmann-like domain
DNQ11_RS18855	PF17392	Urocanase C-terminal domain
DNQ11_RS18860	PF00221	Aromatic amino acid lyase
DNQ11_RS18865	PF09021	HutP
DNQ11_RS18870	PF01209	ubiE/COQ5 methyltransferase family
DNQ11_RS18895	PF11084	Protein of unknown function (DUF2621)
DNQ11_RS18930	PF07301	Protein of unknown function (DUF1453)
DNQ11_RS18935	PF02683	Cytochrome C biogenesis protein transmembrane region
DNQ11_RS18950	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS18950	PF03466	LysR substrate binding domain
DNQ11_RS18955	PF03788	LrgA family
DNQ11_RS18960	PF04172	LrgB-like family 
DNQ11_RS18965	PF13344	Haloacid dehalogenase-like hydrolase
DNQ11_RS18965	PF00293	NUDIX domain
DNQ11_RS18985	PF01510	N-acetylmuramoyl-L-alanine amidase
DNQ11_RS18985	PF01471	Putative peptidoglycan binding domain
DNQ11_RS19000	PF00005	ABC transporter
DNQ11_RS19000	PF00664	ABC transporter transmembrane region
DNQ11_RS19005	PF00664	ABC transporter transmembrane region
DNQ11_RS19005	PF00005	ABC transporter
DNQ11_RS19010	PF03672	Uncharacterised protein family (UPF0154)
DNQ11_RS19015	PF10747	Sporulation inhibitor of replication protein SirA 
DNQ11_RS19020	PF00456	Transketolase, thiamine diphosphate binding domain
DNQ11_RS19020	PF02780	Transketolase, C-terminal domain
DNQ11_RS19020	PF02779	Transketolase, pyrimidine binding domain
DNQ11_RS19030	PF12323	Helix-turn-helix domain
DNQ11_RS19030	PF07282	Putative transposase DNA-binding domain
DNQ11_RS19030	PF01385	Probable transposase
DNQ11_RS19040	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS19045	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS19050	PF00005	ABC transporter
DNQ11_RS19065	PF05979	Bacterial protein of unknown function (DUF896)
DNQ11_RS19070	PF00239	Resolvase, N terminal domain
DNQ11_RS19075	PF01726	LexA DNA binding domain
DNQ11_RS19075	PF00717	Peptidase S24-like
DNQ11_RS19090	PF03551	Transcriptional regulator PadR-like family
DNQ11_RS19135	PF01510	N-acetylmuramoyl-L-alanine amidase
DNQ11_RS19135	PF01476	LysM domain
DNQ11_RS19135	PF01471	Putative peptidoglycan binding domain
DNQ11_RS19140	PF05105	Bacteriophage holin family 
DNQ11_RS19300	PF08281	Sigma-70, region 4
DNQ11_RS19345	PF02511	Thymidylate synthase complementing protein
DNQ11_RS19355	PF00145	C-5 cytosine-specific DNA methylase
DNQ11_RS19435	PF01381	Helix-turn-helix
DNQ11_RS19455	PF00589	Phage integrase family
DNQ11_RS19455	PF02899	Phage integrase, N-terminal SAM-like domain
DNQ11_RS19460	PF00120	Glutamine synthetase, catalytic domain
DNQ11_RS19460	PF03951	Glutamine synthetase, beta-Grasp domain
DNQ11_RS19465	PF13411	MerR HTH family regulatory protein
DNQ11_RS19470	PF06838	Methionine gamma-lyase 
DNQ11_RS19480	PF03458	UPF0126 domain
DNQ11_RS19490	PF00004	ATPase family associated with various cellular activities (AAA)
DNQ11_RS19490	PF17866	AAA lid domain
DNQ11_RS19505	PF17209	Hfq protein
DNQ11_RS19520	PF01476	LysM domain
DNQ11_RS19520	PF06725	3D domain
DNQ11_RS19530	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
DNQ11_RS19530	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DNQ11_RS19535	PF00294	pfkB family carbohydrate kinase
DNQ11_RS19540	PF00455	DeoR C terminal sensor domain
DNQ11_RS19540	PF08220	DeoR-like helix-turn-helix domain
DNQ11_RS19550	PF04238	Protein of unknown function (DUF420)
DNQ11_RS19575	PF00041	Fibronectin type III domain
DNQ11_RS19575	PF00704	Glycosyl hydrolases family 18
DNQ11_RS19585	PF00149	Calcineurin-like phosphoesterase
DNQ11_RS19585	PF10518	TAT (twin-arginine translocation) pathway signal sequence
DNQ11_RS19590	PF01226	Formate/nitrite transporter
DNQ11_RS19595	PF00216	Bacterial DNA-binding protein
DNQ11_RS19605	PF00403	Heavy-metal-associated domain
DNQ11_RS19610	PF00403	Heavy-metal-associated domain
DNQ11_RS19615	PF02583	Metal-sensitive transcriptional repressor
DNQ11_RS19625	PF00756	Putative esterase
DNQ11_RS19630	PF00005	ABC transporter
DNQ11_RS19635	PF01032	FecCD transport family
DNQ11_RS19640	PF01032	FecCD transport family
DNQ11_RS19650	PF03372	Endonuclease/Exonuclease/phosphatase family
DNQ11_RS19655	PF12833	Helix-turn-helix domain
DNQ11_RS19655	PF02805	Metal binding domain of Ada
DNQ11_RS19660	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
DNQ11_RS19660	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
DNQ11_RS19665	PF00730	HhH-GPD superfamily base excision DNA repair protein
DNQ11_RS19665	PF07934	8-oxoguanine DNA glycosylase, N-terminal domain
DNQ11_RS19670	PF01546	Peptidase family M20/M25/M40
DNQ11_RS19670	PF07687	Peptidase dimerisation domain
DNQ11_RS19690	PF00561	alpha/beta hydrolase fold
DNQ11_RS19695	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS19700	PF03707	Bacterial signalling protein N terminal repeat
DNQ11_RS19700	PF00990	Diguanylate cyclase, GGDEF domain
DNQ11_RS19700	PF00563	EAL domain
DNQ11_RS19715	PF10787	Uncharacterised protein from bacillus cereus group
DNQ11_RS19720	PF04172	LrgB-like family 
DNQ11_RS19725	PF03788	LrgA family
DNQ11_RS19730	PF00155	Aminotransferase class I and II
DNQ11_RS19730	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS19735	PF00561	alpha/beta hydrolase fold
DNQ11_RS19735	PF00364	Biotin-requiring enzyme
DNQ11_RS19740	PF02585	GlcNAc-PI de-N-acetylase
DNQ11_RS19755	PF00388	Phosphatidylinositol-specific phospholipase C, X domain
DNQ11_RS19760	PF00082	Subtilase family
DNQ11_RS19765	PF07486	Cell Wall Hydrolase
DNQ11_RS19770	PF03275	UDP-galactopyranose mutase
DNQ11_RS19775	PF00884	Sulfatase
DNQ11_RS19790	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
DNQ11_RS19795	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS19795	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS19800	PF00072	Response regulator receiver domain
DNQ11_RS19800	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS19815	PF00005	ABC transporter
DNQ11_RS19820	PF08676	MutL C terminal dimerisation domain
DNQ11_RS19820	PF01119	DNA mismatch repair protein, C-terminal domain
DNQ11_RS19825	PF05188	MutS domain II
DNQ11_RS19825	PF05190	MutS family domain IV
DNQ11_RS19825	PF00488	MutS domain V
DNQ11_RS19825	PF05192	MutS domain III
DNQ11_RS19825	PF01624	MutS domain I
DNQ11_RS19830	PF10628	Outer spore coat protein E (CotE)
DNQ11_RS19835	PF06133	Control of competence regulator ComK, YlbF/YmcA
DNQ11_RS19840	PF04055	Radical SAM superfamily
DNQ11_RS19840	PF01938	TRAM domain
DNQ11_RS19840	PF00919	Uncharacterized protein family UPF0004
DNQ11_RS19845	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
DNQ11_RS19850	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
DNQ11_RS19850	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
DNQ11_RS19850	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
DNQ11_RS19855	PF01244	Membrane dipeptidase (Peptidase family M19)
DNQ11_RS19860	PF04232	Stage V sporulation protein S (SpoVS)
DNQ11_RS19865	PF13277	YmdB-like protein
DNQ11_RS19870	PF01966	HD domain
DNQ11_RS19870	PF12072	Domain of unknown function (DUF3552)
DNQ11_RS19870	PF00013	KH domain
DNQ11_RS19875	PF00154	recA bacterial DNA recombination protein
DNQ11_RS19885	PF02464	Competence-damaged protein
DNQ11_RS19885	PF18146	Damage-inducible protein CinA KH domain
DNQ11_RS19885	PF00994	Probable molybdopterin binding domain
DNQ11_RS19890	PF01066	CDP-alcohol phosphatidyltransferase
DNQ11_RS19895	PF13464	Domain of unknown function (DUF4115)
DNQ11_RS19900	PF11868	Protein of unknown function (DUF3388)
DNQ11_RS19905	PF11588	Protein of unknown function (DUF3243)
DNQ11_RS19915	PF00675	Insulinase (Peptidase family M16)
DNQ11_RS19915	PF05193	Peptidase M16 inactive domain
DNQ11_RS19920	PF05193	Peptidase M16 inactive domain
DNQ11_RS19925	PF02653	Branched-chain amino acid transport system / permease component
DNQ11_RS19935	PF00005	ABC transporter
DNQ11_RS19940	PF02608	ABC transporter substrate-binding protein PnrA-like
DNQ11_RS19945	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS19945	PF07702	UTRA domain
DNQ11_RS19950	PF01580	FtsK/SpoIIIE family
DNQ11_RS19950	PF09397	Ftsk gamma domain
DNQ11_RS19950	PF17854	FtsK alpha domain
DNQ11_RS19955	PF14035	YlzJ-like protein
DNQ11_RS19960	PF00574	Clp protease
DNQ11_RS19965	PF17770	Ribonuclease J C-terminal domain
DNQ11_RS19965	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
DNQ11_RS19965	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS19975	PF00701	Dihydrodipicolinate synthetase family
DNQ11_RS19980	PF13840	ACT domain 
DNQ11_RS19980	PF00696	Amino acid kinase family
DNQ11_RS19985	PF01118	Semialdehyde dehydrogenase, NAD binding domain
DNQ11_RS19985	PF02774	Semialdehyde dehydrogenase, dimerisation domain
DNQ11_RS19990	PF02441	Flavoprotein
DNQ11_RS19995	PF16924	Dipicolinate synthase subunit A N-terminal domain
DNQ11_RS19995	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
DNQ11_RS20005	PF05239	PRC-barrel domain
DNQ11_RS20010	PF05193	Peptidase M16 inactive domain
DNQ11_RS20010	PF00675	Insulinase (Peptidase family M16)
DNQ11_RS20015	PF01522	Polysaccharide deacetylase
DNQ11_RS20020	PF03725	3' exoribonuclease family, domain 2
DNQ11_RS20020	PF00575	S1 RNA binding domain
DNQ11_RS20020	PF00013	KH domain
DNQ11_RS20020	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
DNQ11_RS20020	PF01138	3' exoribonuclease family, domain 1
DNQ11_RS20025	PF00312	Ribosomal protein S15
DNQ11_RS20030	PF06574	FAD synthetase
DNQ11_RS20030	PF01687	Riboflavin kinase
DNQ11_RS20035	PF16198	tRNA pseudouridylate synthase B C-terminal domain
DNQ11_RS20035	PF01509	TruB family pseudouridylate synthase (N terminal domain)
DNQ11_RS20040	PF02033	Ribosome-binding factor A
DNQ11_RS20045	PF04456	Protein of unknown function (DUF503)
DNQ11_RS20050	PF04760	Translation initiation factor IF-2, N-terminal region
DNQ11_RS20050	PF00009	Elongation factor Tu GTP binding domain
DNQ11_RS20050	PF11987	Translation-initiation factor 2
DNQ11_RS20055	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
DNQ11_RS20060	PF04296	Protein of unknown function (DUF448)
DNQ11_RS20065	PF13184	NusA-like KH domain
DNQ11_RS20065	PF08529	NusA N-terminal domain
DNQ11_RS20065	PF00575	S1 RNA binding domain
DNQ11_RS20070	PF17384	RimP C-terminal SH3 domain
DNQ11_RS20070	PF02576	RimP N-terminal domain
DNQ11_RS20075	PF02811	PHP domain
DNQ11_RS20075	PF14579	Helix-hairpin-helix motif
DNQ11_RS20075	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
DNQ11_RS20075	PF00929	Exonuclease
DNQ11_RS20075	PF11490	DNA polymerase III polC-type N-terminus II
DNQ11_RS20075	PF07733	Bacterial DNA polymerase III alpha NTPase domain
DNQ11_RS20075	PF14480	DNA polymerase III polC-type N-terminus I
DNQ11_RS20085	PF04073	Aminoacyl-tRNA editing domain
DNQ11_RS20085	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
DNQ11_RS20085	PF03129	Anticodon binding domain
DNQ11_RS20090	PF17820	PDZ domain
DNQ11_RS20090	PF02163	Peptidase family M50
DNQ11_RS20095	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
DNQ11_RS20095	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
DNQ11_RS20095	PF13288	DXP reductoisomerase C-terminal domain
DNQ11_RS20105	PF01255	Putative undecaprenyl diphosphate synthase
DNQ11_RS20110	PF01765	Ribosome recycling factor
DNQ11_RS20115	PF00696	Amino acid kinase family
DNQ11_RS20120	PF00889	Elongation factor TS
DNQ11_RS20125	PF00318	Ribosomal protein S2
DNQ11_RS20130	PF06018	CodY GAF-like domain
DNQ11_RS20130	PF08222	CodY helix-turn-helix domain
DNQ11_RS20135	PF07724	AAA domain (Cdc48 subfamily)
DNQ11_RS20135	PF00004	ATPase family associated with various cellular activities (AAA)
DNQ11_RS20135	PF10431	C-terminal, D2-small domain, of ClpB protein 
DNQ11_RS20140	PF00227	Proteasome subunit
DNQ11_RS20145	PF02899	Phage integrase, N-terminal SAM-like domain
DNQ11_RS20145	PF00589	Phage integrase family
DNQ11_RS20150	PF01134	Glucose inhibited division protein A
DNQ11_RS20155	PF01131	DNA topoisomerase
DNQ11_RS20155	PF01396	Topoisomerase DNA binding C4 zinc finger
DNQ11_RS20155	PF01751	Toprim domain
DNQ11_RS20165	PF00549	CoA-ligase
DNQ11_RS20165	PF02629	CoA binding domain
DNQ11_RS20170	PF00549	CoA-ligase
DNQ11_RS20170	PF08442	ATP-grasp domain
DNQ11_RS20175	PF01351	Ribonuclease HII
DNQ11_RS20180	PF01926	50S ribosome-binding GTPase
DNQ11_RS20185	PF10502	Signal peptidase, peptidase S26 
DNQ11_RS20190	PF01245	Ribosomal protein L19
DNQ11_RS20195	PF01746	tRNA (Guanine-1)-methyltransferase
DNQ11_RS20200	PF05239	PRC-barrel domain
DNQ11_RS20200	PF01782	RimM N-terminal domain
DNQ11_RS20210	PF00886	Ribosomal protein S16
DNQ11_RS20215	PF02881	SRP54-type protein, helical bundle domain
DNQ11_RS20215	PF00448	SRP54-type protein, GTPase domain
DNQ11_RS20215	PF02978	Signal peptide binding domain
DNQ11_RS20220	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
DNQ11_RS20225	PF02881	SRP54-type protein, helical bundle domain
DNQ11_RS20225	PF00448	SRP54-type protein, GTPase domain
DNQ11_RS20230	PF06470	SMC proteins Flexible Hinge Domain
DNQ11_RS20230	PF02463	RecF/RecN/SMC N terminal domain
DNQ11_RS20235	PF00035	Double-stranded RNA binding motif
DNQ11_RS20235	PF14622	Ribonuclease-III-like
DNQ11_RS20240	PF00550	Phosphopantetheine attachment site
DNQ11_RS20250	PF00698	Acyl transferase domain
DNQ11_RS20255	PF02504	Fatty acid synthesis protein
DNQ11_RS20260	PF03061	Thioesterase superfamily
DNQ11_RS20265	PF00270	DEAD/DEAH box helicase
DNQ11_RS20265	PF00271	Helicase conserved C-terminal domain
DNQ11_RS20265	PF17191	RecG wedge domain
DNQ11_RS20270	PF02734	DAK2 domain
DNQ11_RS20270	PF13684	Dihydroxyacetone kinase family
DNQ11_RS20275	PF03780	Asp23 family, cell envelope-related function
DNQ11_RS20280	PF00830	Ribosomal L28 family
DNQ11_RS20285	PF08183	Stage V sporulation protein family
DNQ11_RS20290	PF04263	Thiamin pyrophosphokinase, catalytic domain
DNQ11_RS20290	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
DNQ11_RS20295	PF00834	Ribulose-phosphate 3 epimerase family
DNQ11_RS20300	PF16745	RsgA N-terminal domain
DNQ11_RS20300	PF03193	RsgA GTPase
DNQ11_RS20305	PF03793	PASTA domain
DNQ11_RS20305	PF00069	Protein kinase domain
DNQ11_RS20315	PF04055	Radical SAM superfamily
DNQ11_RS20320	PF01189	16S rRNA methyltransferase RsmB/F
DNQ11_RS20320	PF01029	NusB family
DNQ11_RS20325	PF02911	Formyl transferase, C-terminal domain
DNQ11_RS20325	PF00551	Formyl transferase
DNQ11_RS20330	PF01327	Polypeptide deformylase
DNQ11_RS20335	PF17764	3′ DNA-binding domain (3′BD)
DNQ11_RS20335	PF00271	Helicase conserved C-terminal domain
DNQ11_RS20335	PF18074	Primosomal protein N C-terminal domain
DNQ11_RS20335	PF04851	Type III restriction enzyme, res subunit
DNQ11_RS20335	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
DNQ11_RS20340	PF04127	DNA / pantothenate metabolism flavoprotein
DNQ11_RS20340	PF02441	Flavoprotein
DNQ11_RS20345	PF01192	RNA polymerase Rpb6 
DNQ11_RS20350	PF00625	Guanylate kinase
DNQ11_RS20355	PF04025	Domain of unknown function (DUF370)
DNQ11_RS20360	PF08340	Domain of unknown function (DUF1732)
DNQ11_RS20360	PF03755	YicC-like family, N-terminal region 
DNQ11_RS20365	PF00689	Cation transporting ATPase, C-terminus
DNQ11_RS20365	PF00690	Cation transporter/ATPase, N-terminus
DNQ11_RS20370	PF05670	NFACT protein RNA binding domain
DNQ11_RS20375	PF00557	Metallopeptidase family M24
DNQ11_RS20375	PF01321	Creatinase/Prolidase N-terminal domain
DNQ11_RS20410	PF00156	Phosphoribosyl transferase domain
DNQ11_RS20415	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
DNQ11_RS20420	PF01180	Dihydroorotate dehydrogenase
DNQ11_RS20425	PF00175	Oxidoreductase NAD-binding domain 
DNQ11_RS20425	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
DNQ11_RS20430	PF02142	MGS-like domain
DNQ11_RS20430	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
DNQ11_RS20430	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
DNQ11_RS20435	PF00117	Glutamine amidotransferase class-I
DNQ11_RS20435	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
DNQ11_RS20440	PF01979	Amidohydrolase family
DNQ11_RS20445	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
DNQ11_RS20445	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
DNQ11_RS20450	PF00860	Permease family
DNQ11_RS20455	PF00156	Phosphoribosyl transferase domain
DNQ11_RS20460	PF00849	RNA pseudouridylate synthase
DNQ11_RS20460	PF01479	S4 domain
DNQ11_RS20465	PF01252	Signal peptidase (SPase) II
DNQ11_RS20475	PF08264	Anticodon-binding domain of tRNA
DNQ11_RS20475	PF00133	tRNA synthetases class I (I, L, M and V)
DNQ11_RS20475	PF06827	Zinc finger found in FPG and IleRS
DNQ11_RS20480	PF05103	DivIVA protein
DNQ11_RS20485	PF01479	S4 domain
DNQ11_RS20485	PF17774	Putative RNA-binding domain in YlmH
DNQ11_RS20490	PF02325	YGGT family
DNQ11_RS20495	PF04472	Cell division protein SepF
DNQ11_RS20500	PF01168	Alanine racemase, N-terminal domain
DNQ11_RS20505	PF02578	Multi-copper polyphenol oxidoreductase laccase
DNQ11_RS20510	PF05239	PRC-barrel domain
DNQ11_RS20515	PF04545	Sigma-70, region 4
DNQ11_RS20515	PF04539	Sigma-70 region 3
DNQ11_RS20515	PF04542	Sigma-70 region 2 
DNQ11_RS20520	PF04545	Sigma-70, region 4
DNQ11_RS20520	PF04542	Sigma-70 region 2 
DNQ11_RS20525	PF03419	Sporulation factor SpoIIGA 
DNQ11_RS20530	PF12327	FtsZ family, C-terminal domain
DNQ11_RS20530	PF00091	Tubulin/FtsZ family, GTPase domain
DNQ11_RS20535	PF02491	SHS2 domain inserted in FTSA
DNQ11_RS20540	PF08478	POTRA domain, FtsQ-type
DNQ11_RS20540	PF03799	Cell division protein FtsQ
DNQ11_RS20545	PF01565	FAD binding domain 
DNQ11_RS20545	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
DNQ11_RS20550	PF03033	Glycosyltransferase family 28 N-terminal domain
DNQ11_RS20550	PF04101	Glycosyltransferase family 28 C-terminal domain
DNQ11_RS20555	PF01098	Cell cycle protein
DNQ11_RS20560	PF08245	Mur ligase middle domain
DNQ11_RS20560	PF02875	Mur ligase family, glutamate ligase domain
DNQ11_RS20565	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
DNQ11_RS20565	PF00953	Glycosyl transferase family 4
DNQ11_RS20570	PF01225	Mur ligase family, catalytic domain
DNQ11_RS20570	PF02875	Mur ligase family, glutamate ligase domain
DNQ11_RS20570	PF08245	Mur ligase middle domain
DNQ11_RS20575	PF03793	PASTA domain
DNQ11_RS20575	PF03717	Penicillin-binding Protein dimerisation domain
DNQ11_RS20575	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS20580	PF03717	Penicillin-binding Protein dimerisation domain
DNQ11_RS20580	PF03793	PASTA domain
DNQ11_RS20580	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS20585	PF04977	Septum formation initiator
DNQ11_RS20590	PF01795	MraW methylase family
DNQ11_RS20595	PF10079	Bacillithiol biosynthesis BshC 
DNQ11_RS20600	PF08546	Ketopantoate reductase PanE/ApbA C terminal
DNQ11_RS20600	PF02558	Ketopantoate reductase PanE/ApbA
DNQ11_RS20605	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS20615	PF01783	Ribosomal L32p protein family
DNQ11_RS20620	PF02620	Large ribosomal RNA subunit accumulation protein YceD
DNQ11_RS20665	PF01510	N-acetylmuramoyl-L-alanine amidase
DNQ11_RS20665	PF12123	N-acetylmuramoyl-l-alanine amidase
DNQ11_RS20670	PF05105	Bacteriophage holin family 
DNQ11_RS20750	PF00574	Clp protease
DNQ11_RS20760	PF03354	Phage Terminase 
DNQ11_RS20780	PF10137	Predicted nucleotide-binding protein containing TIR-like domain
DNQ11_RS20785	PF00589	Phage integrase family
DNQ11_RS20845	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS20860	PF00692	dUTPase
DNQ11_RS20875	PF04542	Sigma-70 region 2 
DNQ11_RS20875	PF04539	Sigma-70 region 3
DNQ11_RS20875	PF04545	Sigma-70, region 4
DNQ11_RS20900	PF07319	Primosomal protein DnaI N-terminus
DNQ11_RS20900	PF01695	IstB-like ATP binding protein
DNQ11_RS20930	PF01381	Helix-turn-helix
DNQ11_RS20950	PF01381	Helix-turn-helix
DNQ11_RS20970	PF00589	Phage integrase family
DNQ11_RS20970	PF14659	Phage integrase, N-terminal SAM-like domain
DNQ11_RS20975	PF05636	HIGH Nucleotidyl Transferase
DNQ11_RS20980	PF05362	Lon protease (S16) C-terminal proteolytic domain
DNQ11_RS20980	PF13180	PDZ domain
DNQ11_RS20985	PF01734	Patatin-like phospholipase
DNQ11_RS20990	PF07670	Nucleoside recognition
DNQ11_RS20995	PF01467	Cytidylyltransferase-like
DNQ11_RS21010	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
DNQ11_RS21015	PF06133	Control of competence regulator ComK, YlbF/YmcA
DNQ11_RS21020	PF00300	Histidine phosphatase superfamily (branch 1)
DNQ11_RS21025	PF14003	YlbE-like protein
DNQ11_RS21030	PF14071	Putative coat protein
DNQ11_RS21035	PF00188	Cysteine-rich secretory protein family
DNQ11_RS21035	PF14504	CAP-associated N-terminal
DNQ11_RS21040	PF08868	YugN-like family
DNQ11_RS21045	PF00795	Carbon-nitrogen hydrolase
DNQ11_RS21050	PF09678	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
DNQ11_RS21055	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
DNQ11_RS21060	PF00510	Cytochrome c oxidase subunit III
DNQ11_RS21065	PF00115	Cytochrome C and Quinol oxidase polypeptide I
DNQ11_RS21070	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
DNQ11_RS21070	PF00034	Cytochrome c
DNQ11_RS21070	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
DNQ11_RS21075	PF01040	UbiA prenyltransferase family
DNQ11_RS21080	PF02628	Cytochrome oxidase assembly protein
DNQ11_RS21085	PF00289	Biotin carboxylase, N-terminal domain
DNQ11_RS21085	PF00364	Biotin-requiring enzyme
DNQ11_RS21085	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
DNQ11_RS21085	PF00682	HMGL-like
DNQ11_RS21085	PF02436	Conserved carboxylase domain
DNQ11_RS21085	PF02785	Biotin carboxylase C-terminal domain
DNQ11_RS21095	PF01098	Cell cycle protein
DNQ11_RS21100	PF07408	Protein of unknown function (DUF1507)
DNQ11_RS21110	PF13638	PIN domain
DNQ11_RS21110	PF02562	PhoH-like protein
DNQ11_RS21120	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
DNQ11_RS21130	PF14036	YlaH-like protein
DNQ11_RS21135	PF14492	Elongation Factor G, domain II
DNQ11_RS21135	PF03144	Elongation factor Tu domain 2
DNQ11_RS21135	PF00679	Elongation factor G C-terminus
DNQ11_RS21135	PF00009	Elongation factor Tu GTP binding domain
DNQ11_RS21145	PF00459	Inositol monophosphatase family
DNQ11_RS21155	PF06335	Protein of unknown function (DUF1054)
DNQ11_RS21160	PF05256	Uncharacterised protein family (UPF0223)
DNQ11_RS21165	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
DNQ11_RS21165	PF01276	Orn/Lys/Arg decarboxylase, major domain
DNQ11_RS21205	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
DNQ11_RS21205	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS21210	PF02817	e3 binding domain
DNQ11_RS21210	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
DNQ11_RS21210	PF00364	Biotin-requiring enzyme
DNQ11_RS21215	PF02779	Transketolase, pyrimidine binding domain
DNQ11_RS21215	PF02780	Transketolase, C-terminal domain
DNQ11_RS21220	PF00676	Dehydrogenase E1 component
DNQ11_RS21230	PF01327	Polypeptide deformylase
DNQ11_RS21245	PF07288	Protein of unknown function (DUF1447)
DNQ11_RS21250	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS21250	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
DNQ11_RS21250	PF17770	Ribonuclease J C-terminal domain
DNQ11_RS21255	PF02080	TrkA-C domain
DNQ11_RS21255	PF02254	TrkA-N domain
DNQ11_RS21265	PF01546	Peptidase family M20/M25/M40
DNQ11_RS21265	PF07687	Peptidase dimerisation domain
DNQ11_RS21270	PF14602	Hexapeptide repeat of succinyl-transferase
DNQ11_RS21270	PF00132	Bacterial transferase hexapeptide (six repeats)
DNQ11_RS21270	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
DNQ11_RS21275	PF03466	LysR substrate binding domain
DNQ11_RS21275	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS21290	PF04308	Ribonuclease H-like
DNQ11_RS21300	PF08796	Protein of unknown function (DUF1797)
DNQ11_RS21315	PF10388	EAL-domain associated signalling protein domain
DNQ11_RS21315	PF00563	EAL domain
DNQ11_RS21325	PF10518	TAT (twin-arginine translocation) pathway signal sequence
DNQ11_RS21325	PF00149	Calcineurin-like phosphoesterase
DNQ11_RS21340	PF13090	Polyphosphate kinase C-terminal domain 2
DNQ11_RS21340	PF02503	Polyphosphate kinase middle domain
DNQ11_RS21340	PF17941	Polyphosphate kinase C-terminal domain 1
DNQ11_RS21340	PF13089	Polyphosphate kinase N-terminal domain
DNQ11_RS21345	PF02541	Ppx/GppA phosphatase family
DNQ11_RS21350	PF14177	YkyB-like protein
DNQ11_RS21380	PF07690	Major Facilitator Superfamily
DNQ11_RS21390	PF01717	Cobalamin-independent synthase, Catalytic domain
DNQ11_RS21390	PF08267	Cobalamin-independent synthase, N-terminal domain
DNQ11_RS21400	PF14040	Deoxyribonuclease NucA/NucB
DNQ11_RS21415	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS21415	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS21425	PF00155	Aminotransferase class I and II
DNQ11_RS21430	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
DNQ11_RS21430	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS21435	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS21440	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS21445	PF13416	Bacterial extracellular solute-binding protein
DNQ11_RS21450	PF16657	Maltogenic Amylase, C-terminal domain
DNQ11_RS21450	PF02903	Alpha amylase, N-terminal ig-like domain
DNQ11_RS21450	PF00128	Alpha amylase, catalytic domain
DNQ11_RS21455	PF16657	Maltogenic Amylase, C-terminal domain
DNQ11_RS21455	PF00128	Alpha amylase, catalytic domain
DNQ11_RS21460	PF00005	ABC transporter
DNQ11_RS21460	PF17912	MalK OB fold domain
DNQ11_RS21460	PF03459	TOBE domain
DNQ11_RS21500	PF00108	Thiolase, N-terminal domain
DNQ11_RS21500	PF02803	Thiolase, C-terminal domain
DNQ11_RS21505	PF00293	NUDIX domain
DNQ11_RS21540	PF03551	Transcriptional regulator PadR-like family
DNQ11_RS21555	PF01008	Initiation factor 2 subunit family
DNQ11_RS21560	PF01636	Phosphotransferase enzyme family
DNQ11_RS21565	PF00795	Carbon-nitrogen hydrolase
DNQ11_RS21570	PF00155	Aminotransferase class I and II
DNQ11_RS21575	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
DNQ11_RS21575	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
DNQ11_RS21585	PF00596	Class II Aldolase and Adducin N-terminal domain
DNQ11_RS21590	PF03079	ARD/ARD' family
DNQ11_RS21615	PF08448	PAS fold
DNQ11_RS21615	PF00990	Diguanylate cyclase, GGDEF domain
DNQ11_RS21620	PF00881	Nitroreductase family
DNQ11_RS21635	PF00391	PEP-utilising enzyme, mobile domain
DNQ11_RS21635	PF02896	PEP-utilising enzyme, TIM barrel domain
DNQ11_RS21635	PF05524	PEP-utilising enzyme, N-terminal
DNQ11_RS21640	PF00381	PTS HPr component phosphorylation site
DNQ11_RS21645	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DNQ11_RS21645	PF02378	Phosphotransferase system, EIIC 
DNQ11_RS21645	PF00367	phosphotransferase system, EIIB
DNQ11_RS21650	PF00874	PRD domain
DNQ11_RS21650	PF03123	CAT RNA binding domain
DNQ11_RS21660	PF07702	UTRA domain
DNQ11_RS21660	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS21665	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
DNQ11_RS21670	PF01979	Amidohydrolase family
DNQ11_RS21680	PF04079	Segregation and condensation complex subunit ScpB
DNQ11_RS21690	PF02616	Segregation and condensation protein ScpA
DNQ11_RS21700	PF03745	Domain of unknown function (DUF309)
DNQ11_RS21705	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS21715	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
DNQ11_RS21720	PF06207	Protein of unknown function (DUF1002)
DNQ11_RS21730	PF03323	Bacillus/Clostridium GerA spore germination protein
DNQ11_RS21735	PF14097	Stage V sporulation protein AE1
DNQ11_RS21740	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
DNQ11_RS21745	PF07451	Stage V sporulation protein AD (SpoVAD)
DNQ11_RS21750	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
DNQ11_RS21755	PF13782	Stage V sporulation protein AB
DNQ11_RS21760	PF12164	Stage V sporulation protein AA
DNQ11_RS21770	PF00209	Sodium:neurotransmitter symporter family
DNQ11_RS21775	PF04545	Sigma-70, region 4
DNQ11_RS21775	PF04542	Sigma-70 region 2 
DNQ11_RS21775	PF04539	Sigma-70 region 3
DNQ11_RS21780	PF13581	Histidine kinase-like ATPase domain
DNQ11_RS21785	PF01740	STAS domain
DNQ11_RS21790	PF07943	Penicillin-binding protein 5, C-terminal domain
DNQ11_RS21790	PF00768	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS21800	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS21805	PF00005	ABC transporter
DNQ11_RS21825	PF01047	MarR family
DNQ11_RS21835	PF00860	Permease family
DNQ11_RS21840	PF01544	CorA-like Mg2+ transporter protein
DNQ11_RS21845	PF02885	Glycosyl transferase family, helical bundle domain
DNQ11_RS21845	PF00591	Glycosyl transferase family, a/b domain
DNQ11_RS21845	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
DNQ11_RS21850	PF01048	Phosphorylase superfamily
DNQ11_RS21855	PF01676	Metalloenzyme superfamily
DNQ11_RS21865	PF00589	Phage integrase family
DNQ11_RS21865	PF02899	Phage integrase, N-terminal SAM-like domain
DNQ11_RS21870	PF14004	Protein of unknown function (DUF4227)
DNQ11_RS21875	PF01475	Ferric uptake regulator family
DNQ11_RS21880	PF01944	Stage II sporulation protein M
DNQ11_RS21890	PF00293	NUDIX domain
DNQ11_RS21895	PF13072	Mother cell inhibitor of FtsZ
DNQ11_RS21900	PF00248	Aldo/keto reductase family
DNQ11_RS21905	PF00248	Aldo/keto reductase family
DNQ11_RS21910	PF13673	Acetyltransferase (GNAT) domain
DNQ11_RS21910	PF04229	GrpB protein
DNQ11_RS21920	PF02872	5'-nucleotidase, C-terminal domain
DNQ11_RS21920	PF00746	LPXTG cell wall anchor motif
DNQ11_RS21920	PF00565	Staphylococcal nuclease homologue
DNQ11_RS21920	PF00149	Calcineurin-like phosphoesterase
DNQ11_RS21930	PF12146	Serine aminopeptidase, S33
DNQ11_RS21935	PF13726	Na+-H+ antiporter family
DNQ11_RS21935	PF03553	Na+/H+ antiporter family
DNQ11_RS21940	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS21945	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS21950	PF12146	Serine aminopeptidase, S33
DNQ11_RS21955	PF10827	Protein of unknown function (DUF2552) 
DNQ11_RS21965	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
DNQ11_RS21965	PF01872	RibD C-terminal domain
DNQ11_RS21970	PF00677	Lumazine binding domain
DNQ11_RS21975	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
DNQ11_RS21975	PF00925	GTP cyclohydrolase II
DNQ11_RS21980	PF00885	6,7-dimethyl-8-ribityllumazine synthase
DNQ11_RS21990	PF06968	Biotin and Thiamin Synthesis associated domain
DNQ11_RS21990	PF04055	Radical SAM superfamily
DNQ11_RS21995	PF13847	Methyltransferase domain
DNQ11_RS22000	PF08241	Methyltransferase domain
DNQ11_RS22000	PF12697	Alpha/beta hydrolase family
DNQ11_RS22005	PF00155	Aminotransferase class I and II
DNQ11_RS22015	PF00202	Aminotransferase class-III
DNQ11_RS22030	PF03553	Na+/H+ antiporter family
DNQ11_RS22035	PF02872	5'-nucleotidase, C-terminal domain
DNQ11_RS22035	PF00149	Calcineurin-like phosphoesterase
DNQ11_RS22045	PF13404	AsnC-type helix-turn-helix domain
DNQ11_RS22045	PF01037	Lrp/AsnC ligand binding domain
DNQ11_RS22060	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
DNQ11_RS22060	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
DNQ11_RS22065	PF00202	Aminotransferase class-III
DNQ11_RS22070	PF00696	Amino acid kinase family
DNQ11_RS22075	PF01960	ArgJ family
DNQ11_RS22080	PF01118	Semialdehyde dehydrogenase, NAD binding domain
DNQ11_RS22080	PF02774	Semialdehyde dehydrogenase, dimerisation domain
DNQ11_RS22090	PF00106	short chain dehydrogenase
DNQ11_RS22100	PF03807	NADP oxidoreductase coenzyme F420-dependent
DNQ11_RS22100	PF14748	Pyrroline-5-carboxylate reductase dimerisation
DNQ11_RS22105	PF03313	Serine dehydratase alpha chain
DNQ11_RS22110	PF03315	Serine dehydratase beta chain
DNQ11_RS22110	PF01842	ACT domain
DNQ11_RS22120	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS22120	PF12706	Beta-lactamase superfamily domain
DNQ11_RS22135	PF11799	impB/mucB/samB family C-terminal domain
DNQ11_RS22135	PF00817	impB/mucB/samB family
DNQ11_RS22135	PF11798	IMS family HHH motif
DNQ11_RS22145	PF07687	Peptidase dimerisation domain
DNQ11_RS22145	PF01546	Peptidase family M20/M25/M40
DNQ11_RS22150	PF13302	Acetyltransferase (GNAT) domain
DNQ11_RS22165	PF03734	L,D-transpeptidase catalytic domain
DNQ11_RS22170	PF06081	Aromatic acid exporter family member 1
DNQ11_RS22170	PF11728	Putative aromatic acid exporter C-terminal domain
DNQ11_RS22175	PF00005	ABC transporter
DNQ11_RS22180	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS22185	PF00497	Bacterial extracellular solute-binding proteins, family 3
DNQ11_RS22195	PF06491	Disulphide isomerase
DNQ11_RS22200	PF11208	Protein of unknown function (DUF2992)
DNQ11_RS22205	PF00293	NUDIX domain
DNQ11_RS22205	PF09297	NADH pyrophosphatase zinc ribbon domain
DNQ11_RS22210	PF01098	Cell cycle protein
DNQ11_RS22220	PF02817	e3 binding domain
DNQ11_RS22220	PF00364	Biotin-requiring enzyme
DNQ11_RS22220	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
DNQ11_RS22225	PF02780	Transketolase, C-terminal domain
DNQ11_RS22225	PF02779	Transketolase, pyrimidine binding domain
DNQ11_RS22230	PF00676	Dehydrogenase E1 component
DNQ11_RS22235	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
DNQ11_RS22235	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS22240	PF00871	Acetokinase family
DNQ11_RS22245	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
DNQ11_RS22245	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
DNQ11_RS22250	PF01515	Phosphate acetyl/butaryl transferase
DNQ11_RS22260	PF00158	Sigma-54 interaction domain
DNQ11_RS22260	PF00989	PAS fold
DNQ11_RS22260	PF02954	Bacterial regulatory protein, Fis family
DNQ11_RS22270	PF03009	Glycerophosphoryl diester phosphodiesterase family
DNQ11_RS22275	PF14174	YycC-like protein
DNQ11_RS22285	PF08769	Sporulation initiation factor Spo0A C terminal
DNQ11_RS22285	PF00072	Response regulator receiver domain
DNQ11_RS22295	PF05580	SpoIVB peptidase S55
DNQ11_RS22295	PF17820	PDZ domain
DNQ11_RS22300	PF13476	AAA domain
DNQ11_RS22305	PF01316	Arginine repressor, DNA binding domain
DNQ11_RS22305	PF02863	Arginine repressor, C-terminal domain
DNQ11_RS22310	PF01728	FtsJ-like methyltransferase
DNQ11_RS22310	PF01479	S4 domain
DNQ11_RS22315	PF02780	Transketolase, C-terminal domain
DNQ11_RS22315	PF02779	Transketolase, pyrimidine binding domain
DNQ11_RS22315	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
DNQ11_RS22320	PF00348	Polyprenyl synthetase
DNQ11_RS22325	PF02609	Exonuclease VII small subunit
DNQ11_RS22330	PF13742	OB-fold nucleic acid binding domain
DNQ11_RS22330	PF02601	Exonuclease VII, large subunit
DNQ11_RS22335	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
DNQ11_RS22335	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
DNQ11_RS22340	PF01029	NusB family
DNQ11_RS22345	PF03780	Asp23 family, cell envelope-related function
DNQ11_RS22350	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
DNQ11_RS22350	PF00289	Biotin carboxylase, N-terminal domain
DNQ11_RS22350	PF02785	Biotin carboxylase C-terminal domain
DNQ11_RS22355	PF00364	Biotin-requiring enzyme
DNQ11_RS22365	PF12685	SpoIIIAH-like protein
DNQ11_RS22375	PF09581	Stage III sporulation protein AF (Spore_III_AF)
DNQ11_RS22380	PF09546	Stage III sporulation protein AE (spore_III_AE)
DNQ11_RS22385	PF06686	Stage III sporulation protein AC/AD protein family
DNQ11_RS22390	PF06686	Stage III sporulation protein AC/AD protein family
DNQ11_RS22395	PF09548	Stage III sporulation protein AB (spore_III_AB)
DNQ11_RS22420	PF01132	Elongation factor P (EF-P) OB domain
DNQ11_RS22420	PF08207	Elongation factor P (EF-P) KOW-like domain
DNQ11_RS22420	PF09285	Elongation factor P, C-terminal
DNQ11_RS22425	PF01321	Creatinase/Prolidase N-terminal domain
DNQ11_RS22425	PF00557	Metallopeptidase family M24
DNQ11_RS22430	PF01220	Dehydroquinase class II
DNQ11_RS22435	PF11085	Conserved membrane protein YqhR
DNQ11_RS22440	PF07136	Protein of unknown function (DUF1385)
DNQ11_RS22450	PF13419	Haloacid dehalogenase-like hydrolase
DNQ11_RS22455	PF02742	Iron dependent repressor, metal binding and dimerisation domain
DNQ11_RS22455	PF01325	Iron dependent repressor, N-terminal DNA binding domain
DNQ11_RS22470	PF03099	Biotin/lipoate A/B protein ligase family
DNQ11_RS22475	PF00581	Rhodanese-like domain
DNQ11_RS22480	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
DNQ11_RS22480	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS22490	PF00893	Small Multidrug Resistance protein
DNQ11_RS22495	PF00893	Small Multidrug Resistance protein
DNQ11_RS22535	PF00005	ABC transporter
DNQ11_RS22540	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS22560	PF02347	Glycine cleavage system P-protein
DNQ11_RS22565	PF02347	Glycine cleavage system P-protein
DNQ11_RS22570	PF08669	Glycine cleavage T-protein C-terminal barrel domain
DNQ11_RS22570	PF01571	Aminomethyltransferase folate-binding domain
DNQ11_RS22575	PF00271	Helicase conserved C-terminal domain
DNQ11_RS22575	PF00176	SNF2 family N-terminal domain
DNQ11_RS22580	PF11079	Bacterial protein YqhG of unknown function
DNQ11_RS22605	PF14038	YqzE-like protein
DNQ11_RS22610	PF01202	Shikimate kinase
DNQ11_RS22635	PF07963	Prokaryotic N-terminal methylation motif
DNQ11_RS22645	PF00482	Type II secretion system (T2SS), protein F
DNQ11_RS22650	PF00437	Type II/IV secretion system protein
DNQ11_RS22660	PF11117	Protein of unknown function (DUF2626)
DNQ11_RS22665	PF00375	Sodium:dicarboxylate symporter family
DNQ11_RS22700	PF03033	Glycosyltransferase family 28 N-terminal domain
DNQ11_RS22700	PF04101	Glycosyltransferase family 28 C-terminal domain
DNQ11_RS22705	PF02965	Vitamin B12 dependent methionine synthase, activation domain
DNQ11_RS22705	PF02574	Homocysteine S-methyltransferase
DNQ11_RS22705	PF00809	Pterin binding enzyme
DNQ11_RS22705	PF02310	B12 binding domain
DNQ11_RS22705	PF02607	B12 binding domain
DNQ11_RS22710	PF02219	Methylenetetrahydrofolate reductase
DNQ11_RS22710	PF02574	Homocysteine S-methyltransferase
DNQ11_RS22715	PF01053	Cys/Met metabolism PLP-dependent enzyme
DNQ11_RS22720	PF01053	Cys/Met metabolism PLP-dependent enzyme
DNQ11_RS22730	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS22740	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS22745	PF10958	Protein of unknown function (DUF2759)
DNQ11_RS22750	PF00480	ROK family
DNQ11_RS22755	PF06014	Bacterial protein of unknown function (DUF910)
DNQ11_RS22760	PF01812	5-formyltetrahydrofolate cyclo-ligase family
DNQ11_RS22765	PF00471	Ribosomal protein L33
DNQ11_RS22770	PF00483	Nucleotidyl transferase
DNQ11_RS22775	PF01895	PhoU domain
DNQ11_RS22780	PF00005	ABC transporter
DNQ11_RS22785	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS22790	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS22795	PF12849	PBP superfamily domain
DNQ11_RS22800	PF03717	Penicillin-binding Protein dimerisation domain
DNQ11_RS22800	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS22805	PF07690	Major Facilitator Superfamily
DNQ11_RS22810	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
DNQ11_RS22810	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
DNQ11_RS22830	PF04551	GcpE protein
DNQ11_RS22835	PF01475	Ferric uptake regulator family
DNQ11_RS22840	PF00950	ABC 3 transport family
DNQ11_RS22845	PF00005	ABC transporter
DNQ11_RS22850	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS22850	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS22855	PF11116	Protein of unknown function (DUF2624)
DNQ11_RS22860	PF01261	Xylose isomerase-like TIM barrel
DNQ11_RS22865	PF00271	Helicase conserved C-terminal domain
DNQ11_RS22865	PF00270	DEAD/DEAH box helicase
DNQ11_RS22875	PF02401	LytB protein
DNQ11_RS22880	PF01784	NIF3 (NGG1p interacting factor 3)
DNQ11_RS22885	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
DNQ11_RS22890	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
DNQ11_RS22895	PF00140	Sigma-70 factor, region 1.2
DNQ11_RS22895	PF04542	Sigma-70 region 2 
DNQ11_RS22895	PF03979	Sigma-70 factor, region 1.1
DNQ11_RS22895	PF04539	Sigma-70 region 3
DNQ11_RS22895	PF04545	Sigma-70, region 4
DNQ11_RS22900	PF01807	CHC2 zinc finger
DNQ11_RS22900	PF10410	DnaB-helicase binding domain of primase
DNQ11_RS22900	PF08275	DNA primase catalytic core, N-terminal domain
DNQ11_RS22915	PF03618	Kinase/pyrophosphorylase
DNQ11_RS22920	PF08279	HTH domain
DNQ11_RS22920	PF00571	CBS domain
DNQ11_RS22925	PF02565	Recombination protein O C terminal
DNQ11_RS22925	PF11967	Recombination protein O N terminal
DNQ11_RS22935	PF07650	KH domain
DNQ11_RS22935	PF01926	50S ribosome-binding GTPase
DNQ11_RS22940	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
DNQ11_RS22945	PF01219	Prokaryotic diacylglycerol kinase
DNQ11_RS22950	PF02130	Uncharacterized protein family UPF0054
DNQ11_RS22955	PF07698	7TM receptor with intracellular HD hydrolase
DNQ11_RS22955	PF01966	HD domain
DNQ11_RS22955	PF07697	7TM-HD extracellular
DNQ11_RS22960	PF02562	PhoH-like protein
DNQ11_RS22965	PF06898	Putative stage IV sporulation protein YqfD
DNQ11_RS22975	PF07873	YabP family
DNQ11_RS22980	PF09424	Yqey-like protein
DNQ11_RS22985	PF01165	Ribosomal protein S21
DNQ11_RS22995	PF04055	Radical SAM superfamily
DNQ11_RS22995	PF01938	TRAM domain
DNQ11_RS22995	PF00919	Uncharacterized protein family UPF0004
DNQ11_RS23000	PF04452	RNA methyltransferase
DNQ11_RS23010	PF01556	DnaJ C terminal domain
DNQ11_RS23010	PF00684	DnaJ central domain
DNQ11_RS23010	PF00226	DnaJ domain
DNQ11_RS23015	PF00012	Hsp70 protein
DNQ11_RS23020	PF01025	GrpE
DNQ11_RS23025	PF01628	HrcA protein C terminal domain
DNQ11_RS23030	PF06969	HemN C-terminal domain
DNQ11_RS23030	PF04055	Radical SAM superfamily
DNQ11_RS23035	PF01638	HxlR-like helix-turn-helix
DNQ11_RS23040	PF00679	Elongation factor G C-terminus
DNQ11_RS23040	PF00009	Elongation factor Tu GTP binding domain
DNQ11_RS23040	PF06421	GTP-binding protein LepA C-terminus
DNQ11_RS23040	PF03144	Elongation factor Tu domain 2
DNQ11_RS23050	PF03418	Germination protease
DNQ11_RS23055	PF01649	Ribosomal protein S20
DNQ11_RS23060	PF06144	DNA polymerase III, delta subunit
DNQ11_RS23065	PF14141	YqzM-like protein
DNQ11_RS23070	PF03772	Competence protein
DNQ11_RS23070	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS23070	PF13567	Domain of unknown function (DUF4131)
DNQ11_RS23075	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
DNQ11_RS23080	PF10531	SLBB domain
DNQ11_RS23085	PF14748	Pyrroline-5-carboxylate reductase dimerisation
DNQ11_RS23085	PF03807	NADP oxidoreductase coenzyme F420-dependent
DNQ11_RS23090	PF13649	Methyltransferase domain
DNQ11_RS23100	PF01966	HD domain
DNQ11_RS23105	PF01467	Cytidylyltransferase-like
DNQ11_RS23110	PF01985	CRS1 / YhbY (CRM) domain
DNQ11_RS23115	PF08501	Shikimate dehydrogenase substrate binding domain
DNQ11_RS23115	PF01488	Shikimate / quinate 5-dehydrogenase
DNQ11_RS23115	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
DNQ11_RS23120	PF01926	50S ribosome-binding GTPase
DNQ11_RS23135	PF02666	Phosphatidylserine decarboxylase
DNQ11_RS23140	PF04542	Sigma-70 region 2 
DNQ11_RS23140	PF04545	Sigma-70, region 4
DNQ11_RS23155	PF16244	Domain of unknown function (DUF4901)
DNQ11_RS23160	PF00471	Ribosomal protein L33
DNQ11_RS23165	PF00881	Nitroreductase family
DNQ11_RS23170	PF04607	Region found in RelA / SpoT proteins
DNQ11_RS23180	PF00245	Alkaline phosphatase
DNQ11_RS23190	PF00561	alpha/beta hydrolase fold
DNQ11_RS23190	PF08386	TAP-like protein
DNQ11_RS23225	PF05922	Peptidase inhibitor I9
DNQ11_RS23225	PF13860	FlgD Ig-like domain
DNQ11_RS23225	PF02225	PA domain
DNQ11_RS23225	PF00082	Subtilase family
DNQ11_RS23230	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
DNQ11_RS23245	PF07681	DoxX
DNQ11_RS23275	PF00005	ABC transporter
DNQ11_RS23280	PF01032	FecCD transport family
DNQ11_RS23285	PF01497	Periplasmic binding protein
DNQ11_RS23290	PF14143	YrhC-like protein
DNQ11_RS23295	PF00465	Iron-containing alcohol dehydrogenase 
DNQ11_RS23295	PF00171	Aldehyde dehydrogenase family
DNQ11_RS23300	PF01053	Cys/Met metabolism PLP-dependent enzyme
DNQ11_RS23305	PF00291	Pyridoxal-phosphate dependent enzyme
DNQ11_RS23310	PF01048	Phosphorylase superfamily
DNQ11_RS23315	PF08241	Methyltransferase domain
DNQ11_RS23330	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS23330	PF03717	Penicillin-binding Protein dimerisation domain
DNQ11_RS23335	PF01272	Transcription elongation factor, GreA/GreB, C-term
DNQ11_RS23335	PF03449	Transcription elongation factor, N-terminal
DNQ11_RS23340	PF00485	Phosphoribulokinase / Uridine kinase family
DNQ11_RS23345	PF01136	Peptidase family U32
DNQ11_RS23345	PF16325	Peptidase family U32 C-terminal domain
DNQ11_RS23350	PF01136	Peptidase family U32
DNQ11_RS23355	PF01596	O-methyltransferase
DNQ11_RS23360	PF02618	YceG-like family
DNQ11_RS23365	PF06949	Protein of unknown function (DUF1292)
DNQ11_RS23370	PF03652	Holliday junction resolvase
DNQ11_RS23375	PF06135	IreB regulatory phosphoprotein
DNQ11_RS23380	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
DNQ11_RS23380	PF02272	DHHA1 domain
DNQ11_RS23380	PF01411	tRNA synthetases class II (A)
DNQ11_RS23390	PF01594	AI-2E family transporter
DNQ11_RS23410	PF14490	Helix-hairpin-helix containing domain
DNQ11_RS23410	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
DNQ11_RS23410	PF13538	UvrD-like helicase C-terminal domain
DNQ11_RS23425	PF00266	Aminotransferase class-V
DNQ11_RS23430	PF02082	Transcriptional regulator
DNQ11_RS23435	PF12002	MgsA AAA+ ATPase C terminal
DNQ11_RS23435	PF05496	Holliday junction DNA helicase RuvB P-loop domain
DNQ11_RS23435	PF16193	AAA C-terminal domain
DNQ11_RS23445	PF00899	ThiF family
DNQ11_RS23450	PF02938	GAD domain
DNQ11_RS23450	PF01336	OB-fold nucleic acid binding domain
DNQ11_RS23450	PF00152	tRNA synthetases class II (D, K and N) 
DNQ11_RS23455	PF03129	Anticodon binding domain
DNQ11_RS23455	PF13393	Histidyl-tRNA synthetase
DNQ11_RS23470	PF02580	D-Tyr-tRNA(Tyr) deacylase
DNQ11_RS23475	PF04607	Region found in RelA / SpoT proteins
DNQ11_RS23475	PF02824	TGS domain
DNQ11_RS23475	PF13291	ACT domain
DNQ11_RS23480	PF00156	Phosphoribosyl transferase domain
DNQ11_RS23485	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
DNQ11_RS23485	PF17768	RecJ OB domain
DNQ11_RS23485	PF02272	DHHA1 domain
DNQ11_RS23485	PF01368	DHH family
DNQ11_RS23490	PF16916	Dimerisation domain of Zinc Transporter
DNQ11_RS23490	PF01545	Cation efflux family
DNQ11_RS23495	PF07549	SecD/SecF GG Motif
DNQ11_RS23495	PF02355	Protein export membrane protein
DNQ11_RS23500	PF13797	Post-transcriptional regulator
DNQ11_RS23505	PF14667	Polysaccharide biosynthesis C-terminal domain
DNQ11_RS23505	PF01943	Polysaccharide biosynthesis protein
DNQ11_RS23510	PF04239	Protein of unknown function (DUF421)
DNQ11_RS23520	PF02699	Preprotein translocase subunit
DNQ11_RS23525	PF01702	Queuine tRNA-ribosyltransferase
DNQ11_RS23530	PF02547	Queuosine biosynthesis protein
DNQ11_RS23535	PF11146	Protein of unknown function (DUF2905)
DNQ11_RS23540	PF17864	RuvB AAA lid domain
DNQ11_RS23540	PF05491	RuvB C-terminal winged helix domain
DNQ11_RS23540	PF05496	Holliday junction DNA helicase RuvB P-loop domain
DNQ11_RS23545	PF07499	RuvA, C-terminal domain
DNQ11_RS23545	PF01330	RuvA N terminal domain
DNQ11_RS23550	PF01497	Periplasmic binding protein
DNQ11_RS23560	PF00892	EamA-like transporter family
DNQ11_RS23565	PF00892	EamA-like transporter family
DNQ11_RS23570	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS23585	PF01476	LysM domain
DNQ11_RS23590	PF02445	Quinolinate synthetase A protein
DNQ11_RS23595	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
DNQ11_RS23595	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
DNQ11_RS23600	PF00890	FAD binding domain
DNQ11_RS23600	PF02910	Fumarate reductase flavoprotein C-term
DNQ11_RS23605	PF00266	Aminotransferase class-V
DNQ11_RS23610	PF02829	3H domain
DNQ11_RS23610	PF08279	HTH domain
DNQ11_RS23615	PF03473	MOSC domain
DNQ11_RS23615	PF03475	3-alpha domain
DNQ11_RS23620	PF00800	Prephenate dehydratase
DNQ11_RS23620	PF01842	ACT domain
DNQ11_RS23625	PF02687	FtsX-like permease family
DNQ11_RS23630	PF02687	FtsX-like permease family
DNQ11_RS23635	PF00005	ABC transporter
DNQ11_RS23645	PF00072	Response regulator receiver domain
DNQ11_RS23645	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS23650	PF09269	Domain of unknown function (DUF1967)
DNQ11_RS23650	PF01926	50S ribosome-binding GTPase
DNQ11_RS23650	PF01018	GTP1/OBG
DNQ11_RS23655	PF14682	Sporulation initiation phospho-transferase B, C-terminal
DNQ11_RS23655	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
DNQ11_RS23660	PF01016	Ribosomal L27 protein
DNQ11_RS23665	PF04327	Cysteine protease Prp
DNQ11_RS23670	PF00829	Ribosomal prokaryotic L21 protein
DNQ11_RS23675	PF00575	S1 RNA binding domain
DNQ11_RS23675	PF10150	Ribonuclease E/G family
DNQ11_RS23680	PF02163	Peptidase family M50
DNQ11_RS23685	PF01551	Peptidase family M23
DNQ11_RS23690	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
DNQ11_RS23695	PF03775	Septum formation inhibitor MinC, C-terminal domain
DNQ11_RS23705	PF04085	rod shape-determining protein MreC
DNQ11_RS23715	PF04002	RadC-like JAB domain
DNQ11_RS23720	PF02545	Maf-like protein
DNQ11_RS23735	PF08245	Mur ligase middle domain
DNQ11_RS23735	PF02875	Mur ligase family, glutamate ligase domain
DNQ11_RS23740	PF00133	tRNA synthetases class I (I, L, M and V)
DNQ11_RS23740	PF10458	Valyl tRNA synthetase tRNA binding arm
DNQ11_RS23740	PF08264	Anticodon-binding domain of tRNA
DNQ11_RS23750	PF01476	LysM domain
DNQ11_RS23755	PF00202	Aminotransferase class-III
DNQ11_RS23760	PF00490	Delta-aminolevulinic acid dehydratase
DNQ11_RS23765	PF02602	Uroporphyrinogen-III synthase HemD
DNQ11_RS23770	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
DNQ11_RS23770	PF03900	Porphobilinogen deaminase, C-terminal domain
DNQ11_RS23775	PF01578	Cytochrome C assembly protein
DNQ11_RS23780	PF01488	Shikimate / quinate 5-dehydrogenase
DNQ11_RS23780	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
DNQ11_RS23780	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
DNQ11_RS23785	PF01047	MarR family
DNQ11_RS23790	PF02566	OsmC-like protein
DNQ11_RS23795	PF01926	50S ribosome-binding GTPase
DNQ11_RS23800	PF05362	Lon protease (S16) C-terminal proteolytic domain
DNQ11_RS23800	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
DNQ11_RS23800	PF00004	ATPase family associated with various cellular activities (AAA)
DNQ11_RS23805	PF00004	ATPase family associated with various cellular activities (AAA)
DNQ11_RS23805	PF05362	Lon protease (S16) C-terminal proteolytic domain
DNQ11_RS23810	PF10431	C-terminal, D2-small domain, of ClpB protein 
DNQ11_RS23810	PF06689	ClpX C4-type zinc finger
DNQ11_RS23810	PF07724	AAA domain (Cdc48 subfamily)
DNQ11_RS23815	PF05698	Bacterial trigger factor protein (TF) C-terminus
DNQ11_RS23815	PF05697	Bacterial trigger factor protein (TF)
DNQ11_RS23815	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
DNQ11_RS23835	PF11724	YvbH-like oligomerisation region
DNQ11_RS23835	PF08000	Bacterial PH domain
DNQ11_RS23860	PF12850	Calcineurin-like phosphoesterase superfamily domain
DNQ11_RS23865	PF01725	Ham1 family
DNQ11_RS23870	PF03725	3' exoribonuclease family, domain 2
DNQ11_RS23870	PF01138	3' exoribonuclease family, domain 1
DNQ11_RS23875	PF10646	Sporulation and spore germination
DNQ11_RS23880	PF01177	Asp/Glu/Hydantoin racemase
DNQ11_RS23895	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS23910	PF00196	Bacterial regulatory proteins, luxR family
DNQ11_RS23915	PF00860	Permease family
DNQ11_RS23925	PF07969	Amidohydrolase family
DNQ11_RS23930	PF07969	Amidohydrolase family
DNQ11_RS23935	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS23940	PF12911	N-terminal TM domain of oligopeptide transport permease C
DNQ11_RS23940	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS23945	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS23950	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS23950	PF00005	ABC transporter
DNQ11_RS23955	PF00005	ABC transporter
DNQ11_RS23955	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
DNQ11_RS23965	PF04397	LytTr DNA-binding domain
DNQ11_RS23965	PF00072	Response regulator receiver domain
DNQ11_RS23980	PF04024	PspC domain
DNQ11_RS23985	PF01381	Helix-turn-helix
DNQ11_RS23985	PF07883	Cupin domain
DNQ11_RS23990	PF13536	Putative multidrug resistance efflux transporter
DNQ11_RS23995	PF00230	Major intrinsic protein
DNQ11_RS24000	PF02082	Transcriptional regulator
DNQ11_RS24010	PF13732	Domain of unknown function (DUF4162)
DNQ11_RS24010	PF00005	ABC transporter
DNQ11_RS24015	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
DNQ11_RS24025	PF01618	MotA/TolQ/ExbB proton channel family
DNQ11_RS24030	PF02557	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS24035	PF03061	Thioesterase superfamily
DNQ11_RS24040	PF13085	2Fe-2S iron-sulfur cluster binding domain
DNQ11_RS24040	PF13183	4Fe-4S dicluster domain
DNQ11_RS24045	PF00890	FAD binding domain
DNQ11_RS24045	PF02910	Fumarate reductase flavoprotein C-term
DNQ11_RS24050	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
DNQ11_RS24055	PF10702	Protein of unknown function (DUF2507)
DNQ11_RS24060	PF08459	UvrC Helix-hairpin-helix N-terminal
DNQ11_RS24060	PF02151	UvrB/uvrC motif
DNQ11_RS24060	PF01541	GIY-YIG catalytic domain
DNQ11_RS24065	PF00085	Thioredoxin
DNQ11_RS24070	PF00766	Electron transfer flavoprotein FAD-binding domain
DNQ11_RS24070	PF01012	Electron transfer flavoprotein domain
DNQ11_RS24075	PF01012	Electron transfer flavoprotein domain
DNQ11_RS24080	PF00378	Enoyl-CoA hydratase/isomerase
DNQ11_RS24085	PF08359	YsiA-like protein, C-terminal region
DNQ11_RS24085	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS24090	PF00501	AMP-binding enzyme
DNQ11_RS24090	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS24105	PF01497	Periplasmic binding protein
DNQ11_RS24110	PF01032	FecCD transport family
DNQ11_RS24115	PF05163	DinB family
DNQ11_RS24145	PF00005	ABC transporter
DNQ11_RS24150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS24150	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS24155	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS24155	PF00072	Response regulator receiver domain
DNQ11_RS24165	PF09962	Uncharacterized conserved protein (DUF2196)
DNQ11_RS24170	PF10672	S-adenosylmethionine-dependent methyltransferase
DNQ11_RS24170	PF17785	PUA-like domain
DNQ11_RS24180	PF03992	Antibiotic biosynthesis monooxygenase
DNQ11_RS24185	PF04203	Sortase domain
DNQ11_RS24190	PF00005	ABC transporter
DNQ11_RS24195	PF01032	FecCD transport family
DNQ11_RS24200	PF01497	Periplasmic binding protein
DNQ11_RS24205	PF05031	Iron Transport-associated domain 
DNQ11_RS24215	PF05031	Iron Transport-associated domain 
DNQ11_RS24220	PF05525	Branched-chain amino acid transport protein
DNQ11_RS24225	PF01479	S4 domain
DNQ11_RS24225	PF00849	RNA pseudouridylate synthase
DNQ11_RS24235	PF01713	Smr domain
DNQ11_RS24235	PF00488	MutS domain V
DNQ11_RS24240	PF14716	Helix-hairpin-helix domain
DNQ11_RS24240	PF14791	DNA polymerase beta thumb 
DNQ11_RS24240	PF02811	PHP domain
DNQ11_RS24245	PF02674	Colicin V production protein
DNQ11_RS24250	PF05164	Cell division protein ZapA
DNQ11_RS24255	PF11858	Domain of unknown function (DUF3378)
DNQ11_RS24255	PF01351	Ribonuclease HII
DNQ11_RS24275	PF00152	tRNA synthetases class II (D, K and N) 
DNQ11_RS24275	PF01336	OB-fold nucleic acid binding domain
DNQ11_RS24280	PF03483	B3/4 domain
DNQ11_RS24280	PF03484	tRNA synthetase B5 domain
DNQ11_RS24280	PF03147	Ferredoxin-fold anticodon binding domain
DNQ11_RS24280	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
DNQ11_RS24280	PF01588	Putative tRNA binding domain
DNQ11_RS24285	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
DNQ11_RS24285	PF01409	tRNA synthetases class II core domain (F)
DNQ11_RS24290	PF00588	SpoU rRNA Methylase family
DNQ11_RS24290	PF08032	RNA 2'-O ribose methyltransferase substrate binding
DNQ11_RS24295	PF14098	Small, acid-soluble spore protein I
DNQ11_RS24300	PF01966	HD domain
DNQ11_RS24325	PF07690	Major Facilitator Superfamily
DNQ11_RS24335	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS24335	PF16859	Tetracyclin repressor-like, C-terminal domain
DNQ11_RS24340	PF05343	M42 glutamyl aminopeptidase
DNQ11_RS24350	PF00453	Ribosomal protein L20
DNQ11_RS24355	PF01632	Ribosomal protein L35
DNQ11_RS24360	PF00707	Translation initiation factor IF-3, C-terminal domain
DNQ11_RS24360	PF05198	Translation initiation factor IF-3, N-terminal domain
DNQ11_RS24365	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
DNQ11_RS24365	PF03129	Anticodon binding domain
DNQ11_RS24365	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
DNQ11_RS24365	PF02824	TGS domain
DNQ11_RS24370	PF08812	YtxC-like family
DNQ11_RS24375	PF01695	IstB-like ATP binding protein
DNQ11_RS24375	PF07319	Primosomal protein DnaI N-terminus
DNQ11_RS24380	PF07261	Replication initiation and membrane attachment
DNQ11_RS24385	PF03477	ATP cone domain
DNQ11_RS24390	PF02675	S-adenosylmethionine decarboxylase 
DNQ11_RS24400	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
DNQ11_RS24400	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DNQ11_RS24405	PF01121	Dephospho-CoA kinase
DNQ11_RS24410	PF02659	Putative manganese efflux pump
DNQ11_RS24415	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
DNQ11_RS24415	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
DNQ11_RS24415	PF06827	Zinc finger found in FPG and IleRS
DNQ11_RS24420	PF01367	5'-3' exonuclease, C-terminal SAM fold
DNQ11_RS24420	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
DNQ11_RS24420	PF00476	DNA polymerase family A
DNQ11_RS24425	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS24425	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS24425	PF16736	Single Cache-like 
DNQ11_RS24425	PF00989	PAS fold
DNQ11_RS24430	PF00072	Response regulator receiver domain
DNQ11_RS24430	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS24450	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
DNQ11_RS24450	PF00056	lactate/malate dehydrogenase, NAD binding domain
DNQ11_RS24455	PF00180	Isocitrate/isopropylmalate dehydrogenase
DNQ11_RS24460	PF00285	Citrate synthase, C-terminal domain
DNQ11_RS24470	PF04284	Protein of unknown function (DUF441)
DNQ11_RS24475	PF01594	AI-2E family transporter
DNQ11_RS24480	PF04186	FxsA cytoplasmic membrane protein 
DNQ11_RS24485	PF00391	PEP-utilising enzyme, mobile domain
DNQ11_RS24485	PF00224	Pyruvate kinase, barrel domain
DNQ11_RS24485	PF02887	Pyruvate kinase, alpha/beta domain
DNQ11_RS24490	PF00365	Phosphofructokinase
DNQ11_RS24495	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
DNQ11_RS24500	PF01039	Carboxyl transferase domain
DNQ11_RS24500	PF17848	Acetyl-coA carboxylase zinc finger domain
DNQ11_RS24505	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS24510	PF00390	Malic enzyme, N-terminal domain
DNQ11_RS24510	PF03949	Malic enzyme, NAD binding domain
DNQ11_RS24515	PF01336	OB-fold nucleic acid binding domain
DNQ11_RS24515	PF02811	PHP domain
DNQ11_RS24515	PF14579	Helix-hairpin-helix motif
DNQ11_RS24515	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
DNQ11_RS24515	PF07733	Bacterial DNA polymerase III alpha NTPase domain
DNQ11_RS24520	PF14034	Sporulation protein YtrH
DNQ11_RS24530	PF02272	DHHA1 domain
DNQ11_RS24530	PF01368	DHH family
DNQ11_RS24540	PF14007	YtpI-like protein
DNQ11_RS24555	PF00571	CBS domain
DNQ11_RS24555	PF03061	Thioesterase superfamily
DNQ11_RS24555	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS24555	PF07085	DRTGG domain
DNQ11_RS24570	PF01321	Creatinase/Prolidase N-terminal domain
DNQ11_RS24570	PF00557	Metallopeptidase family M24
DNQ11_RS24575	PF11518	Protein of unknown function (DUF3221)
DNQ11_RS24610	PF12746	GNAT acetyltransferase
DNQ11_RS24615	PF07883	Cupin domain
DNQ11_RS24625	PF01381	Helix-turn-helix
DNQ11_RS24635	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
DNQ11_RS24635	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
DNQ11_RS24645	PF00582	Universal stress protein family
DNQ11_RS24665	PF14698	Argininosuccinate lyase C-terminal
DNQ11_RS24665	PF00206	Lyase
DNQ11_RS24670	PF00764	Arginosuccinate synthase
DNQ11_RS24695	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS24695	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS24700	PF12787	EcsC protein family
DNQ11_RS24715	PF00871	Acetokinase family
DNQ11_RS24720	PF02384	N-6 DNA Methylase
DNQ11_RS24725	PF08534	Redoxin
DNQ11_RS24730	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
DNQ11_RS24740	PF01513	ATP-NAD kinase
DNQ11_RS24745	PF07969	Amidohydrolase family
DNQ11_RS24755	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS24755	PF00501	AMP-binding enzyme
DNQ11_RS24760	PF00269	Small, acid-soluble spore proteins, alpha/beta type
DNQ11_RS24765	PF02926	THUMP domain
DNQ11_RS24765	PF02568	Thiamine biosynthesis protein (ThiI)
DNQ11_RS24770	PF00266	Aminotransferase class-V
DNQ11_RS24775	PF06160	Septation ring formation regulator, EzrA 
DNQ11_RS24780	PF03466	LysR substrate binding domain
DNQ11_RS24780	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS24785	PF00892	EamA-like transporter family
DNQ11_RS24795	PF13185	GAF domain
DNQ11_RS24800	PF01053	Cys/Met metabolism PLP-dependent enzyme
DNQ11_RS24810	PF00163	Ribosomal protein S4/S9 N-terminal domain
DNQ11_RS24810	PF01479	S4 domain
DNQ11_RS24825	PF00579	tRNA synthetases class I (W and Y)
DNQ11_RS24825	PF01479	S4 domain
DNQ11_RS24835	PF08281	Sigma-70, region 4
DNQ11_RS24835	PF04542	Sigma-70 region 2 
DNQ11_RS24850	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS24850	PF00501	AMP-binding enzyme
DNQ11_RS24855	PF00583	Acetyltransferase (GNAT) family
DNQ11_RS24860	PF00571	CBS domain
DNQ11_RS24865	PF00850	Histone deacetylase domain
DNQ11_RS24875	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS24875	PF00072	Response regulator receiver domain
DNQ11_RS24880	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS24880	PF13426	PAS domain
DNQ11_RS24880	PF00672	HAMP domain
DNQ11_RS24880	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS24885	PF12796	Ankyrin repeats (3 copies)
DNQ11_RS24890	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
DNQ11_RS24895	PF01741	Large-conductance mechanosensitive channel, MscL
DNQ11_RS24920	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS24930	PF07537	CamS sex pheromone cAM373 precursor
DNQ11_RS24935	PF11009	Protein of unknown function (DUF2847)
DNQ11_RS24945	PF02073	Thermophilic metalloprotease (M29)
DNQ11_RS24965	PF13302	Acetyltransferase (GNAT) domain
DNQ11_RS24970	PF01225	Mur ligase family, catalytic domain
DNQ11_RS24970	PF02875	Mur ligase family, glutamate ligase domain
DNQ11_RS24970	PF08245	Mur ligase middle domain
DNQ11_RS24980	PF01580	FtsK/SpoIIIE family
DNQ11_RS24980	PF09397	Ftsk gamma domain
DNQ11_RS24980	PF17854	FtsK alpha domain
DNQ11_RS24990	PF14794	Domain of unknown function (DUF4479)
DNQ11_RS24990	PF01588	Putative tRNA binding domain
DNQ11_RS24995	PF07285	Protein of unknown function (DUF1444)
DNQ11_RS25000	PF00085	Thioredoxin
DNQ11_RS25005	PF01931	Protein of unknown function DUF84
DNQ11_RS25010	PF05343	M42 glutamyl aminopeptidase
DNQ11_RS25020	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS25025	PF02390	Putative methyltransferase 
DNQ11_RS25030	PF14165	YtzH-like protein
DNQ11_RS25035	PF01636	Phosphotransferase enzyme family
DNQ11_RS25040	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
DNQ11_RS25040	PF00128	Alpha amylase, catalytic domain
DNQ11_RS25040	PF17999	Pullulanase N1-terminal domain
DNQ11_RS25050	PF02834	LigT like Phosphoesterase
DNQ11_RS25060	PF08220	DeoR-like helix-turn-helix domain
DNQ11_RS25065	PF01479	S4 domain
DNQ11_RS25065	PF00849	RNA pseudouridylate synthase
DNQ11_RS25070	PF14667	Polysaccharide biosynthesis C-terminal domain
DNQ11_RS25070	PF01943	Polysaccharide biosynthesis protein
DNQ11_RS25080	PF07690	Major Facilitator Superfamily
DNQ11_RS25085	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS25090	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
DNQ11_RS25105	PF10957	Sporulation protein Cse60 
DNQ11_RS25115	PF02559	CarD-like/TRCF domain
DNQ11_RS25125	PF06800	Sugar transport protein
DNQ11_RS25140	PF02391	MoaE protein
DNQ11_RS25145	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
DNQ11_RS25150	PF00994	Probable molybdopterin binding domain
DNQ11_RS25150	PF03453	MoeA N-terminal region (domain I and II)
DNQ11_RS25150	PF03454	MoeA C-terminal region (domain IV)
DNQ11_RS25155	PF01967	MoaC family
DNQ11_RS25160	PF00899	ThiF family
DNQ11_RS25185	PF00581	Rhodanese-like domain
DNQ11_RS25195	PF00561	alpha/beta hydrolase fold
DNQ11_RS25200	PF03323	Bacillus/Clostridium GerA spore germination protein
DNQ11_RS25205	PF03845	Spore germination protein
DNQ11_RS25235	PF09334	tRNA synthetases class I (M)
DNQ11_RS25235	PF13603	Leucyl-tRNA synthetase, Domain 2
DNQ11_RS25235	PF00133	tRNA synthetases class I (I, L, M and V)
DNQ11_RS25235	PF08264	Anticodon-binding domain of tRNA
DNQ11_RS25240	PF07690	Major Facilitator Superfamily
DNQ11_RS25245	PF00999	Sodium/hydrogen exchanger family
DNQ11_RS25250	PF02080	TrkA-C domain
DNQ11_RS25255	PF00589	Phage integrase family
DNQ11_RS25265	PF00005	ABC transporter
DNQ11_RS25270	PF07786	Protein of unknown function (DUF1624)
DNQ11_RS25270	PF04235	Protein of unknown function (DUF418)
DNQ11_RS25280	PF10732	Protein of unknown function (DUF2524)
DNQ11_RS25285	PF04055	Radical SAM superfamily
DNQ11_RS25285	PF16199	Radical_SAM C-terminal domain
DNQ11_RS25290	PF06962	Putative rRNA methylase
DNQ11_RS25300	PF13732	Domain of unknown function (DUF4162)
DNQ11_RS25300	PF00005	ABC transporter
DNQ11_RS25310	PF01177	Asp/Glu/Hydantoin racemase
DNQ11_RS25330	PF10776	Protein of unknown function (DUF2600)
DNQ11_RS25335	PF12146	Serine aminopeptidase, S33
DNQ11_RS25340	PF00132	Bacterial transferase hexapeptide (six repeats)
DNQ11_RS25345	PF01569	PAP2 superfamily
DNQ11_RS25350	PF13439	Glycosyltransferase Family 4
DNQ11_RS25350	PF00534	Glycosyl transferases group 1
DNQ11_RS25355	PF12804	MobA-like NTP transferase domain
DNQ11_RS25360	PF00994	Probable molybdopterin binding domain
DNQ11_RS25375	PF02773	S-adenosylmethionine synthetase, C-terminal domain
DNQ11_RS25375	PF02772	S-adenosylmethionine synthetase, central domain
DNQ11_RS25375	PF00438	S-adenosylmethionine synthetase, N-terminal domain
DNQ11_RS25385	PF01293	Phosphoenolpyruvate carboxykinase
DNQ11_RS25420	PF01784	NIF3 (NGG1p interacting factor 3)
DNQ11_RS25425	PF13426	PAS domain
DNQ11_RS25425	PF13188	PAS domain
DNQ11_RS25425	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS25425	PF00989	PAS fold
DNQ11_RS25425	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS25430	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS25430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS25430	PF08447	PAS fold
DNQ11_RS25430	PF00989	PAS fold
DNQ11_RS25435	PF08386	TAP-like protein
DNQ11_RS25435	PF00561	alpha/beta hydrolase fold
DNQ11_RS25440	PF00884	Sulfatase
DNQ11_RS25465	PF00005	ABC transporter
DNQ11_RS25470	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS25495	PF00293	NUDIX domain
DNQ11_RS25520	PF02664	S-Ribosylhomocysteinase (LuxS)
DNQ11_RS25525	PF01809	Putative membrane protein insertion efficiency factor
DNQ11_RS25530	PF00484	Carbonic anhydrase
DNQ11_RS25535	PF01654	Cytochrome bd terminal oxidase subunit I
DNQ11_RS25540	PF02322	Cytochrome bd terminal oxidase subunit II
DNQ11_RS25545	PF10676	Spore germination protein gerPA/gerPF
DNQ11_RS25565	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS25565	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS25590	PF04012	PspA/IM30 family
DNQ11_RS25610	PF07664	Ferrous iron transport protein B C terminus
DNQ11_RS25610	PF07670	Nucleoside recognition
DNQ11_RS25610	PF02421	Ferrous iron transport protein B
DNQ11_RS25610	PF17910	FeoB cytosolic helical domain
DNQ11_RS25620	PF09515	Thiamine transporter protein (Thia_YuaJ)
DNQ11_RS25625	PF00672	HAMP domain
DNQ11_RS25625	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS25625	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS25630	PF00072	Response regulator receiver domain
DNQ11_RS25630	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS25655	PF00156	Phosphoribosyl transferase domain
DNQ11_RS25660	PF00781	Diacylglycerol kinase catalytic domain
DNQ11_RS25680	PF00248	Aldo/keto reductase family
DNQ11_RS25700	PF09335	SNARE associated Golgi protein
DNQ11_RS25705	PF00398	Ribosomal RNA adenine dimethylase
DNQ11_RS25710	PF02687	FtsX-like permease family
DNQ11_RS25715	PF00005	ABC transporter
DNQ11_RS25720	PF06445	GyrI-like small molecule binding domain
DNQ11_RS25720	PF12833	Helix-turn-helix domain
DNQ11_RS25725	PF00072	Response regulator receiver domain
DNQ11_RS25725	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS25730	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS25740	PF02687	FtsX-like permease family
DNQ11_RS25745	PF00005	ABC transporter
DNQ11_RS25760	PF02447	GntP family permease
DNQ11_RS25765	PF07702	UTRA domain
DNQ11_RS25765	PF00392	Bacterial regulatory proteins, gntR family
DNQ11_RS25775	PF07071	KDGP aldolase
DNQ11_RS25780	PF03841	L-seryl-tRNA selenium transferase
DNQ11_RS25785	PF01979	Amidohydrolase family
DNQ11_RS25800	PF02557	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS25805	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS25805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS25810	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS25810	PF00072	Response regulator receiver domain
DNQ11_RS25815	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
DNQ11_RS25815	PF13378	Enolase C-terminal domain-like
DNQ11_RS25820	PF00501	AMP-binding enzyme
DNQ11_RS25820	PF13193	AMP-binding enzyme C-terminal domain
DNQ11_RS25825	PF00378	Enoyl-CoA hydratase/isomerase
DNQ11_RS25830	PF00561	alpha/beta hydrolase fold
DNQ11_RS25835	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
DNQ11_RS25835	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
DNQ11_RS25835	PF16582	Middle domain of thiamine pyrophosphate
DNQ11_RS25840	PF00425	chorismate binding enzyme
DNQ11_RS25845	PF01040	UbiA prenyltransferase family
DNQ11_RS25850	PF01258	Prokaryotic dksA/traR C4-type zinc finger
DNQ11_RS25855	PF00313	'Cold-shock' DNA-binding domain
DNQ11_RS25875	PF00343	Carbohydrate phosphorylase
DNQ11_RS25880	PF00534	Glycosyl transferases group 1
DNQ11_RS25880	PF08323	Starch synthase catalytic domain
DNQ11_RS25885	PF00483	Nucleotidyl transferase
DNQ11_RS25890	PF00483	Nucleotidyl transferase
DNQ11_RS25895	PF00128	Alpha amylase, catalytic domain
DNQ11_RS25895	PF02806	Alpha amylase, C-terminal all-beta domain
DNQ11_RS25895	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
DNQ11_RS25915	PF00056	lactate/malate dehydrogenase, NAD binding domain
DNQ11_RS25915	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
DNQ11_RS26015	PF05697	Bacterial trigger factor protein (TF)
DNQ11_RS26015	PF05698	Bacterial trigger factor protein (TF) C-terminus
DNQ11_RS26055	PF02308	MgtC family
DNQ11_RS26060	PF02254	TrkA-N domain
DNQ11_RS26060	PF07885	Ion channel
DNQ11_RS26065	PF08868	YugN-like family
DNQ11_RS26070	PF00342	Phosphoglucose isomerase
DNQ11_RS26080	PF04070	Domain of unknown function (DUF378)
DNQ11_RS26085	PF00575	S1 RNA binding domain
DNQ11_RS26090	PF00155	Aminotransferase class I and II
DNQ11_RS26095	PF01037	Lrp/AsnC ligand binding domain
DNQ11_RS26100	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
DNQ11_RS26100	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
DNQ11_RS26105	PF08386	TAP-like protein
DNQ11_RS26105	PF00561	alpha/beta hydrolase fold
DNQ11_RS26115	PF00155	Aminotransferase class I and II
DNQ11_RS26125	PF08810	Kinase associated protein B
DNQ11_RS26130	PF00929	Exonuclease
DNQ11_RS26135	PF03600	Citrate transporter
DNQ11_RS26155	PF03129	Anticodon binding domain
DNQ11_RS26155	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
DNQ11_RS26160	PF03061	Thioesterase superfamily
DNQ11_RS26170	PF02632	BioY family
DNQ11_RS26180	PF00483	Nucleotidyl transferase
DNQ11_RS26185	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
DNQ11_RS26185	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
DNQ11_RS26185	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
DNQ11_RS26185	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
DNQ11_RS26190	PF10372	Bacterial membrane-spanning protein N-terminus
DNQ11_RS26190	PF02457	DisA bacterial checkpoint controller nucleotide-binding
DNQ11_RS26195	PF00883	Cytosol aminopeptidase family, catalytic domain
DNQ11_RS26195	PF02789	Cytosol aminopeptidase family, N-terminal domain
DNQ11_RS26200	PF06725	3D domain
DNQ11_RS26210	PF13344	Haloacid dehalogenase-like hydrolase
DNQ11_RS26210	PF00293	NUDIX domain
DNQ11_RS26215	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS26220	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS26230	PF06445	GyrI-like small molecule binding domain
DNQ11_RS26245	PF04463	Protein of unknown function (DUF523)
DNQ11_RS26265	PF01521	Iron-sulphur cluster biosynthesis
DNQ11_RS26270	PF01678	Diaminopimelate epimerase
DNQ11_RS26275	PF07293	Protein of unknown function (DUF1450)
DNQ11_RS26280	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS26290	PF09383	NIL domain
DNQ11_RS26290	PF00005	ABC transporter
DNQ11_RS26295	PF03649	Uncharacterised protein family (UPF0014)
DNQ11_RS26300	PF08274	PhnA Zinc-Ribbon 
DNQ11_RS26300	PF03831	PhnA domain
DNQ11_RS26335	PF13427	Domain of unknown function (DUF4111)
DNQ11_RS26335	PF01909	Nucleotidyltransferase domain
DNQ11_RS26340	PF07315	Protein of unknown function (DUF1462)
DNQ11_RS26345	PF01106	NifU-like domain
DNQ11_RS26365	PF04608	Phosphatidylglycerophosphatase A
DNQ11_RS26375	PF02525	Flavodoxin-like fold
DNQ11_RS26380	PF13344	Haloacid dehalogenase-like hydrolase
DNQ11_RS26390	PF01934	Protein of unknown function DUF86
DNQ11_RS26395	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
DNQ11_RS26415	PF06265	Protein of unknown function (DUF1027)
DNQ11_RS26420	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
DNQ11_RS26425	PF13411	MerR HTH family regulatory protein
DNQ11_RS26425	PF07739	TipAS antibiotic-recognition domain
DNQ11_RS26430	PF10086	YhfC intramembrane metalloprotease
DNQ11_RS26450	PF04055	Radical SAM superfamily
DNQ11_RS26450	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
DNQ11_RS26455	PF01551	Peptidase family M23
DNQ11_RS26465	PF08827	Domain of unknown function (DUF1805)
DNQ11_RS26470	PF02872	5'-nucleotidase, C-terminal domain
DNQ11_RS26485	PF03551	Transcriptional regulator PadR-like family
DNQ11_RS26490	PF04892	VanZ like family 
DNQ11_RS26500	PF01458	Uncharacterized protein family (UPF0051)
DNQ11_RS26505	PF01592	NifU-like N terminal domain
DNQ11_RS26510	PF00266	Aminotransferase class-V
DNQ11_RS26515	PF01458	Uncharacterized protein family (UPF0051)
DNQ11_RS26520	PF00005	ABC transporter
DNQ11_RS26525	PF03180	NLPA lipoprotein
DNQ11_RS26530	PF03180	NLPA lipoprotein
DNQ11_RS26535	PF00528	Binding-protein-dependent transport system inner membrane component
DNQ11_RS26540	PF09383	NIL domain
DNQ11_RS26540	PF00005	ABC transporter
DNQ11_RS26550	PF00085	Thioredoxin
DNQ11_RS26555	PF01751	Toprim domain
DNQ11_RS26570	PF01597	Glycine cleavage H-protein
DNQ11_RS26575	PF03960	ArsC family
DNQ11_RS26630	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
DNQ11_RS26630	PF00056	lactate/malate dehydrogenase, NAD binding domain
DNQ11_RS26655	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS26655	PF13305	Tetracyclin repressor-like, C-terminal domain
DNQ11_RS26660	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS26665	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
DNQ11_RS26665	PF02770	Acyl-CoA dehydrogenase, middle domain
DNQ11_RS26665	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
DNQ11_RS26675	PF00108	Thiolase, N-terminal domain
DNQ11_RS26675	PF02803	Thiolase, C-terminal domain
DNQ11_RS26680	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
DNQ11_RS26680	PF00378	Enoyl-CoA hydratase/isomerase
DNQ11_RS26680	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
DNQ11_RS26690	PF14115	YuzL-like protein
DNQ11_RS26695	PF00768	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS26695	PF07943	Penicillin-binding protein 5, C-terminal domain
DNQ11_RS26700	PF01619	Proline dehydrogenase
DNQ11_RS26705	PF10835	Protein of unknown function (DUF2573)
DNQ11_RS26710	PF01910	Thiamine-binding protein
DNQ11_RS26715	PF02743	Cache domain
DNQ11_RS26715	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS26715	PF00672	HAMP domain
DNQ11_RS26735	PF07690	Major Facilitator Superfamily
DNQ11_RS26740	PF13520	Amino acid permease
DNQ11_RS26750	PF02096	60Kd inner membrane protein
DNQ11_RS26760	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
DNQ11_RS26760	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS26800	PF09335	SNARE associated Golgi protein
DNQ11_RS26810	PF03734	L,D-transpeptidase catalytic domain
DNQ11_RS26810	PF17969	L,D-transpeptidase C-terminal domain
DNQ11_RS26815	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS26815	PF00072	Response regulator receiver domain
DNQ11_RS26820	PF16736	Single Cache-like 
DNQ11_RS26820	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS26820	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS26820	PF00989	PAS fold
DNQ11_RS26830	PF09334	tRNA synthetases class I (M)
DNQ11_RS26830	PF08264	Anticodon-binding domain of tRNA
DNQ11_RS26840	PF02743	Cache domain
DNQ11_RS26840	PF00672	HAMP domain
DNQ11_RS26840	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS26845	PF01883	Iron-sulfur cluster assembly protein
DNQ11_RS26850	PF07504	Fungalysin/Thermolysin Propeptide Motif
DNQ11_RS26850	PF01447	Thermolysin metallopeptidase, catalytic domain
DNQ11_RS26850	PF02868	Thermolysin metallopeptidase, alpha-helical domain
DNQ11_RS26850	PF03413	Peptidase propeptide and YPEB domain
DNQ11_RS26855	PF02678	Pirin
DNQ11_RS26855	PF17954	Quercetinase C-terminal cupin domain
DNQ11_RS26860	PF01047	MarR family
DNQ11_RS26870	PF00999	Sodium/hydrogen exchanger family
DNQ11_RS26875	PF02080	TrkA-C domain
DNQ11_RS26885	PF01235	Sodium:alanine symporter family
DNQ11_RS26890	PF00210	Ferritin-like domain
DNQ11_RS26905	PF03641	Possible lysine decarboxylase
DNQ11_RS26915	PF00210	Ferritin-like domain
DNQ11_RS26925	PF07662	Na+ dependent nucleoside transporter C-terminus
DNQ11_RS26925	PF01773	Na+ dependent nucleoside transporter N-terminus
DNQ11_RS26930	PF07662	Na+ dependent nucleoside transporter C-terminus
DNQ11_RS26930	PF01773	Na+ dependent nucleoside transporter N-terminus
DNQ11_RS26935	PF01235	Sodium:alanine symporter family
DNQ11_RS26940	PF01235	Sodium:alanine symporter family
DNQ11_RS26945	PF13460	NAD(P)H-binding 
DNQ11_RS26975	PF00248	Aldo/keto reductase family
DNQ11_RS26980	PF07690	Major Facilitator Superfamily
DNQ11_RS26985	PF01638	HxlR-like helix-turn-helix
DNQ11_RS26990	PF07849	Protein of unknown function (DUF1641)
DNQ11_RS26995	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS27000	PF00579	tRNA synthetases class I (W and Y)
DNQ11_RS27000	PF01479	S4 domain
DNQ11_RS27005	PF01565	FAD binding domain 
DNQ11_RS27005	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
DNQ11_RS27015	PF00672	HAMP domain
DNQ11_RS27015	PF17202	Single cache domain 3
DNQ11_RS27015	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS27025	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
DNQ11_RS27030	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
DNQ11_RS27045	PF13302	Acetyltransferase (GNAT) domain
DNQ11_RS27050	PF06146	Phosphate-starvation-inducible E
DNQ11_RS27070	PF00005	ABC transporter
DNQ11_RS27075	PF01032	FecCD transport family
DNQ11_RS27080	PF01032	FecCD transport family
DNQ11_RS27090	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS27090	PF00072	Response regulator receiver domain
DNQ11_RS27100	PF01668	SmpB protein
DNQ11_RS27110	PF00575	S1 RNA binding domain
DNQ11_RS27110	PF00773	RNB domain
DNQ11_RS27110	PF17876	Cold shock domain
DNQ11_RS27110	PF08206	Ribonuclease B OB domain
DNQ11_RS27115	PF12146	Serine aminopeptidase, S33
DNQ11_RS27120	PF03840	Preprotein translocase SecG subunit
DNQ11_RS27125	PF04172	LrgB-like family 
DNQ11_RS27130	PF03788	LrgA family
DNQ11_RS27135	PF01156	Inosine-uridine preferring nucleoside hydrolase
DNQ11_RS27235	PF04860	Phage portal protein
DNQ11_RS27260	PF02899	Phage integrase, N-terminal SAM-like domain
DNQ11_RS27260	PF00589	Phage integrase family
DNQ11_RS27265	PF00113	Enolase, C-terminal TIM barrel domain
DNQ11_RS27265	PF03952	Enolase, N-terminal domain
DNQ11_RS27270	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
DNQ11_RS27270	PF01676	Metalloenzyme superfamily
DNQ11_RS27275	PF00121	Triosephosphate isomerase
DNQ11_RS27280	PF00162	Phosphoglycerate kinase
DNQ11_RS27285	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DNQ11_RS27285	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
DNQ11_RS27290	PF04198	Putative sugar-binding domain
DNQ11_RS27300	PF04552	Sigma-54, DNA binding domain
DNQ11_RS27300	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
DNQ11_RS27300	PF04963	Sigma-54 factor, core binding domain
DNQ11_RS27320	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
DNQ11_RS27325	PF07451	Stage V sporulation protein AD (SpoVAD)
DNQ11_RS27330	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
DNQ11_RS27340	PF04239	Protein of unknown function (DUF421)
DNQ11_RS27345	PF00574	Clp protease
DNQ11_RS27355	PF00381	PTS HPr component phosphorylation site
DNQ11_RS27360	PF10298	WhiA N-terminal LAGLIDADG-like domain
DNQ11_RS27360	PF02650	WhiA C-terminal HTH domain
DNQ11_RS27360	PF14527	WhiA LAGLIDADG-like domain
DNQ11_RS27365	PF01933	Uncharacterised protein family UPF0052
DNQ11_RS27370	PF03668	P-loop ATPase protein family
DNQ11_RS27375	PF00293	NUDIX domain
DNQ11_RS27385	PF07992	Pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS27395	PF14602	Hexapeptide repeat of succinyl-transferase
DNQ11_RS27400	PF13419	Haloacid dehalogenase-like hydrolase
DNQ11_RS27405	PF01790	Prolipoprotein diacylglyceryl transferase
DNQ11_RS27410	PF02603	HPr Serine kinase N terminus
DNQ11_RS27410	PF07475	HPr Serine kinase C-terminal domain
DNQ11_RS27415	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
DNQ11_RS27425	PF17760	UvrA interaction domain
DNQ11_RS27425	PF17755	UvrA DNA-binding domain
DNQ11_RS27425	PF00005	ABC transporter
DNQ11_RS27430	PF00271	Helicase conserved C-terminal domain
DNQ11_RS27430	PF02151	UvrB/uvrC motif
DNQ11_RS27430	PF12344	Ultra-violet resistance protein B
DNQ11_RS27430	PF17757	UvrB interaction domain
DNQ11_RS27430	PF04851	Type III restriction enzyme, res subunit
DNQ11_RS27435	PF12323	Helix-turn-helix domain
DNQ11_RS27435	PF07282	Putative transposase DNA-binding domain
DNQ11_RS27435	PF01385	Probable transposase
DNQ11_RS27450	PF07739	TipAS antibiotic-recognition domain
DNQ11_RS27450	PF13411	MerR HTH family regulatory protein
DNQ11_RS27480	PF03601	Conserved hypothetical protein 698
DNQ11_RS27485	PF03466	LysR substrate binding domain
DNQ11_RS27485	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS27490	PF13411	MerR HTH family regulatory protein
DNQ11_RS27495	PF03358	NADPH-dependent FMN reductase
DNQ11_RS27500	PF12848	ABC transporter
DNQ11_RS27500	PF00005	ABC transporter
DNQ11_RS27510	PF00664	ABC transporter transmembrane region
DNQ11_RS27510	PF00005	ABC transporter
DNQ11_RS27515	PF17820	PDZ domain
DNQ11_RS27520	PF01471	Putative peptidoglycan binding domain
DNQ11_RS27520	PF03572	Peptidase family S41
DNQ11_RS27520	PF17820	PDZ domain
DNQ11_RS27525	PF02687	FtsX-like permease family
DNQ11_RS27525	PF18075	FtsX extracellular domain
DNQ11_RS27530	PF00005	ABC transporter
DNQ11_RS27535	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
DNQ11_RS27550	PF02810	SEC-C motif
DNQ11_RS27550	PF07516	SecA Wing and Scaffold domain
DNQ11_RS27550	PF07517	SecA DEAD-like domain
DNQ11_RS27550	PF01043	SecA preprotein cross-linking domain
DNQ11_RS27555	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
DNQ11_RS27555	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
DNQ11_RS27560	PF00313	'Cold-shock' DNA-binding domain
DNQ11_RS27570	PF04851	Type III restriction enzyme, res subunit
DNQ11_RS27570	PF00271	Helicase conserved C-terminal domain
DNQ11_RS27575	PF00877	NlpC/P60 family
DNQ11_RS27575	PF01476	LysM domain
DNQ11_RS27580	PF01638	HxlR-like helix-turn-helix
DNQ11_RS27590	PF02645	Uncharacterised protein, DegV family COG1307
DNQ11_RS27595	PF09186	Domain of unknown function (DUF1949)
DNQ11_RS27595	PF01205	Uncharacterized protein family UPF0029
DNQ11_RS27600	PF03816	Cell envelope-related transcriptional attenuator domain
DNQ11_RS27605	PF02350	UDP-N-acetylglucosamine 2-epimerase
DNQ11_RS27610	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
DNQ11_RS27610	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
DNQ11_RS27610	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
DNQ11_RS27615	PF00953	Glycosyl transferase family 4
DNQ11_RS27620	PF01522	Polysaccharide deacetylase
DNQ11_RS27625	PF00874	PRD domain
DNQ11_RS27625	PF03610	PTS system fructose IIA component
DNQ11_RS27625	PF00158	Sigma-54 interaction domain
DNQ11_RS27635	PF02417	Chromate transporter
DNQ11_RS27640	PF04794	YdjC-like protein
DNQ11_RS27645	PF11975	Family 4 glycosyl hydrolase C-terminal domain
DNQ11_RS27645	PF02056	Family 4 glycosyl hydrolase
DNQ11_RS27650	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
DNQ11_RS27655	PF02378	Phosphotransferase system, EIIC 
DNQ11_RS27660	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
DNQ11_RS27670	PF02675	S-adenosylmethionine decarboxylase 
DNQ11_RS27675	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
DNQ11_RS27680	PF02378	Phosphotransferase system, EIIC 
DNQ11_RS27685	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
DNQ11_RS27690	PF00375	Sodium:dicarboxylate symporter family
DNQ11_RS27700	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNQ11_RS27710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
DNQ11_RS27710	PF03466	LysR substrate binding domain
DNQ11_RS27735	PF01654	Cytochrome bd terminal oxidase subunit I
DNQ11_RS27740	PF02322	Cytochrome bd terminal oxidase subunit II
DNQ11_RS27745	PF02040	Arsenical pump membrane protein
DNQ11_RS27750	PF01964	Radical SAM ThiC family
DNQ11_RS27750	PF13667	ThiC-associated domain 
DNQ11_RS27755	PF02652	L-lactate permease
DNQ11_RS27765	PF09988	Uncharacterized metal-binding protein (DUF2227)
DNQ11_RS27780	PF00884	Sulfatase
DNQ11_RS27790	PF01063	Amino-transferase class IV
DNQ11_RS27800	PF07662	Na+ dependent nucleoside transporter C-terminus
DNQ11_RS27800	PF01773	Na+ dependent nucleoside transporter N-terminus
DNQ11_RS27820	PF02028	BCCT, betaine/carnitine/choline family transporter
DNQ11_RS27830	PF06725	3D domain
DNQ11_RS27830	PF01476	LysM domain
DNQ11_RS27855	PF04434	SWIM zinc finger
DNQ11_RS27860	PF00271	Helicase conserved C-terminal domain
DNQ11_RS27860	PF12419	SNF2 Helicase protein 
DNQ11_RS27860	PF00176	SNF2 family N-terminal domain
DNQ11_RS27890	PF04545	Sigma-70, region 4
DNQ11_RS27890	PF04542	Sigma-70 region 2 
DNQ11_RS27895	PF04893	Yip1 domain
DNQ11_RS27900	PF02687	FtsX-like permease family
DNQ11_RS27900	PF12704	MacB-like periplasmic core domain
DNQ11_RS27905	PF00005	ABC transporter
DNQ11_RS27925	PF07690	Major Facilitator Superfamily
DNQ11_RS27940	PF16736	Single Cache-like 
DNQ11_RS27940	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS27940	PF00989	PAS fold
DNQ11_RS27940	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS27945	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS27945	PF00072	Response regulator receiver domain
DNQ11_RS27950	PF16363	GDP-mannose 4,6 dehydratase
DNQ11_RS27955	PF03816	Cell envelope-related transcriptional attenuator domain
DNQ11_RS27965	PF07977	FabA-like domain
DNQ11_RS27970	PF02350	UDP-N-acetylglucosamine 2-epimerase
DNQ11_RS27975	PF08239	Bacterial SH3 domain
DNQ11_RS27975	PF00005	ABC transporter
DNQ11_RS27980	PF01061	ABC-2 type transporter
DNQ11_RS27985	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
DNQ11_RS27985	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
DNQ11_RS27985	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
DNQ11_RS28030	PF12116	Stage III sporulation protein D
DNQ11_RS28045	PF01551	Peptidase family M23
DNQ11_RS28055	PF00005	ABC transporter
DNQ11_RS28065	PF08486	Stage II sporulation protein
DNQ11_RS28070	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
DNQ11_RS28080	PF06612	Protein of unknown function (DUF1146)
DNQ11_RS28090	PF00361	Proton-conducting membrane transporter
DNQ11_RS28095	PF00361	Proton-conducting membrane transporter
DNQ11_RS28100	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
DNQ11_RS28100	PF01010	NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
DNQ11_RS28100	PF00361	Proton-conducting membrane transporter
DNQ11_RS28105	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
DNQ11_RS28110	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
DNQ11_RS28120	PF00146	NADH dehydrogenase
DNQ11_RS28125	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
DNQ11_RS28130	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
DNQ11_RS28135	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
DNQ11_RS28140	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
DNQ11_RS28145	PF03707	Bacterial signalling protein N terminal repeat
DNQ11_RS28145	PF00990	Diguanylate cyclase, GGDEF domain
DNQ11_RS28145	PF00563	EAL domain
DNQ11_RS28160	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
DNQ11_RS28160	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
DNQ11_RS28165	PF02874	ATP synthase alpha/beta family, beta-barrel domain
DNQ11_RS28165	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
DNQ11_RS28170	PF00231	ATP synthase
DNQ11_RS28175	PF00306	ATP synthase alpha/beta chain, C terminal domain
DNQ11_RS28175	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
DNQ11_RS28175	PF02874	ATP synthase alpha/beta family, beta-barrel domain
DNQ11_RS28180	PF00213	ATP synthase delta (OSCP) subunit
DNQ11_RS28185	PF00430	ATP synthase B/B' CF(0)
DNQ11_RS28190	PF00137	ATP synthase subunit C
DNQ11_RS28195	PF00119	ATP synthase A chain
DNQ11_RS28200	PF03899	ATP synthase I chain
DNQ11_RS28220	PF00464	Serine hydroxymethyltransferase
DNQ11_RS28225	PF04260	Protein of unknown function (DUF436) 
DNQ11_RS28230	PF02502	Ribose/Galactose Isomerase
DNQ11_RS28235	PF01451	Low molecular weight phosphotyrosine protein phosphatase
DNQ11_RS28245	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DNQ11_RS28250	PF07681	DoxX
DNQ11_RS28255	PF01613	Flavin reductase like domain
DNQ11_RS28270	PF02659	Putative manganese efflux pump
DNQ11_RS28275	PF03481	Putative GTP-binding controlling metal-binding
DNQ11_RS28275	PF01300	Telomere recombination
DNQ11_RS28285	PF09551	Stage II sporulation protein R (spore_II_R)
DNQ11_RS28290	PF13847	Methyltransferase domain
DNQ11_RS28290	PF17827	PrmC N-terminal domain
DNQ11_RS28295	PF00472	RF-1 domain
DNQ11_RS28295	PF03462	PCRF domain
DNQ11_RS28300	PF00265	Thymidine kinase
DNQ11_RS28305	PF01197	Ribosomal protein L31
DNQ11_RS28310	PF07497	Rho termination factor, RNA-binding domain
DNQ11_RS28310	PF07498	Rho termination factor, N-terminal domain
DNQ11_RS28310	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
DNQ11_RS28315	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
DNQ11_RS28325	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
DNQ11_RS28330	PF01116	Fructose-bisphosphate aldolase class-II
DNQ11_RS28335	PF00072	Response regulator receiver domain
DNQ11_RS28340	PF10740	Domain of unknown function (DUF2529)
DNQ11_RS28345	PF00117	Glutamine amidotransferase class-I
DNQ11_RS28345	PF06418	CTP synthase N-terminus
DNQ11_RS28350	PF05066	HB1, ASXL, restriction endonuclease HTH domain
DNQ11_RS28360	PF02770	Acyl-CoA dehydrogenase, middle domain
DNQ11_RS28360	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
DNQ11_RS28360	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
DNQ11_RS28365	PF02770	Acyl-CoA dehydrogenase, middle domain
DNQ11_RS28365	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
DNQ11_RS28365	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
DNQ11_RS28370	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
DNQ11_RS28370	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
DNQ11_RS28375	PF00108	Thiolase, N-terminal domain
DNQ11_RS28375	PF02803	Thiolase, C-terminal domain
DNQ11_RS28380	PF02754	Cysteine-rich domain
DNQ11_RS28380	PF13183	4Fe-4S dicluster domain
DNQ11_RS28385	PF13091	PLD-like domain
DNQ11_RS28390	PF03851	UV-endonuclease UvdE
DNQ11_RS28395	PF03707	Bacterial signalling protein N terminal repeat
DNQ11_RS28395	PF00990	Diguanylate cyclase, GGDEF domain
DNQ11_RS28395	PF00563	EAL domain
DNQ11_RS28415	PF00196	Bacterial regulatory proteins, luxR family
DNQ11_RS28415	PF00072	Response regulator receiver domain
DNQ11_RS28420	PF07730	Histidine kinase
DNQ11_RS28420	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS28430	PF00005	ABC transporter
DNQ11_RS28435	PF00557	Metallopeptidase family M24
DNQ11_RS28445	PF02324	Glycosyl hydrolase family 70
DNQ11_RS28445	PF01473	Putative cell wall binding repeat
DNQ11_RS28455	PF04389	Peptidase family M28
DNQ11_RS28455	PF02225	PA domain
DNQ11_RS28475	PF08281	Sigma-70, region 4
DNQ11_RS28475	PF04542	Sigma-70 region 2 
DNQ11_RS28480	PF05746	DALR anticodon binding domain
DNQ11_RS28480	PF03485	Arginyl tRNA synthetase N terminal domain
DNQ11_RS28480	PF00750	tRNA synthetases class I (R)
DNQ11_RS28485	PF09148	Domain of unknown function (DUF1934)
DNQ11_RS28490	PF02016	LD-carboxypeptidase N-terminal domain
DNQ11_RS28490	PF17676	LD-carboxypeptidase C-terminal domain
DNQ11_RS28510	PF00491	Arginase family
DNQ11_RS28515	PF17284	Spermidine synthase tetramerisation domain
DNQ11_RS28520	PF07690	Major Facilitator Superfamily
DNQ11_RS28525	PF13411	MerR HTH family regulatory protein
DNQ11_RS28530	PF03009	Glycerophosphoryl diester phosphodiesterase family
DNQ11_RS28535	PF00905	Penicillin binding protein transpeptidase domain
DNQ11_RS28535	PF00912	Transglycosylase
DNQ11_RS28545	PF08741	YwhD family
DNQ11_RS28550	PF02163	Peptidase family M50
DNQ11_RS28555	PF01361	Tautomerase enzyme
DNQ11_RS28560	PF01966	HD domain
DNQ11_RS28565	PF01497	Periplasmic binding protein
DNQ11_RS28575	PF01032	FecCD transport family
DNQ11_RS28585	PF07293	Protein of unknown function (DUF1450)
DNQ11_RS28600	PF03099	Biotin/lipoate A/B protein ligase family
DNQ11_RS28605	PF01515	Phosphate acetyl/butaryl transferase
DNQ11_RS28610	PF06778	Chlorite dismutase
DNQ11_RS28615	PF00768	D-alanyl-D-alanine carboxypeptidase
DNQ11_RS28615	PF07943	Penicillin-binding protein 5, C-terminal domain
DNQ11_RS28620	PF07486	Cell Wall Hydrolase
DNQ11_RS28625	PF09671	Spore coat protein (Spore_GerQ)
DNQ11_RS28630	PF04241	Protein of unknown function (DUF423)
DNQ11_RS28640	PF07885	Ion channel
DNQ11_RS28640	PF02254	TrkA-N domain
DNQ11_RS28645	PF00860	Permease family
DNQ11_RS28655	PF12823	Domain of unknown function (DUF3817)
DNQ11_RS28660	PF03167	Uracil DNA glycosylase superfamily
DNQ11_RS28665	PF12679	ABC-2 family transporter protein
DNQ11_RS28670	PF00005	ABC transporter
DNQ11_RS28675	PF13472	GDSL-like Lipase/Acylhydrolase family
DNQ11_RS28680	PF00356	Bacterial regulatory proteins, lacI family
DNQ11_RS28680	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
DNQ11_RS28695	PF04204	Homoserine O-succinyltransferase 
DNQ11_RS28700	PF01053	Cys/Met metabolism PLP-dependent enzyme
DNQ11_RS28715	PF00027	Cyclic nucleotide-binding domain
DNQ11_RS28720	PF02525	Flavodoxin-like fold
DNQ11_RS28725	PF00196	Bacterial regulatory proteins, luxR family
DNQ11_RS28725	PF00072	Response regulator receiver domain
DNQ11_RS28735	PF08543	Phosphomethylpyrimidine kinase
DNQ11_RS28740	PF07694	5TMR of 5TMR-LYT
DNQ11_RS28740	PF00990	Diguanylate cyclase, GGDEF domain
DNQ11_RS28745	PF04328	Selenoprotein, putative 
DNQ11_RS28750	PF13722	5TM C-terminal transporter carbon starvation CstA
DNQ11_RS28750	PF02554	Carbon starvation protein CstA
DNQ11_RS28755	PF00072	Response regulator receiver domain
DNQ11_RS28755	PF04397	LytTr DNA-binding domain
DNQ11_RS28760	PF07690	Major Facilitator Superfamily
DNQ11_RS28765	PF03808	Glycosyl transferase WecB/TagA/CpsF family
DNQ11_RS28780	PF03458	UPF0126 domain
DNQ11_RS28785	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
DNQ11_RS28795	PF03061	Thioesterase superfamily
DNQ11_RS28805	PF00535	Glycosyl transferase family 2
DNQ11_RS28810	PF00005	ABC transporter
DNQ11_RS28810	PF12848	ABC transporter
DNQ11_RS28840	PF00535	Glycosyl transferase family 2
DNQ11_RS28845	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS28850	PF00873	AcrB/AcrD/AcrF family
DNQ11_RS28855	PF01641	SelR domain
DNQ11_RS28855	PF01625	Peptide methionine sulfoxide reductase
DNQ11_RS28860	PF01594	AI-2E family transporter
DNQ11_RS28865	PF04172	LrgB-like family 
DNQ11_RS28870	PF03788	LrgA family
DNQ11_RS28875	PF04397	LytTr DNA-binding domain
DNQ11_RS28875	PF00072	Response regulator receiver domain
DNQ11_RS28880	PF06580	Histidine kinase
DNQ11_RS28880	PF13492	GAF domain
DNQ11_RS28880	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS28880	PF07694	5TMR of 5TMR-LYT
DNQ11_RS28885	PF07690	Major Facilitator Superfamily
DNQ11_RS28890	PF02028	BCCT, betaine/carnitine/choline family transporter
DNQ11_RS28895	PF02898	Nitric oxide synthase, oxygenase domain
DNQ11_RS28905	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
DNQ11_RS28905	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
DNQ11_RS28915	PF02293	AmiS/UreI family transporter
DNQ11_RS28925	PF16363	GDP-mannose 4,6 dehydratase
DNQ11_RS28930	PF03006	Haemolysin-III related
DNQ11_RS28940	PF00270	DEAD/DEAH box helicase
DNQ11_RS28940	PF00271	Helicase conserved C-terminal domain
DNQ11_RS28940	PF03880	DbpA RNA binding domain   
DNQ11_RS28950	PF00478	IMP dehydrogenase / GMP reductase domain
DNQ11_RS28955	PF01432	Peptidase family M3
DNQ11_RS28955	PF08439	Oligopeptidase F
DNQ11_RS28965	PF02590	Predicted SPOUT methyltransferase
DNQ11_RS28975	PF13180	PDZ domain
DNQ11_RS28980	PF00753	Metallo-beta-lactamase superfamily
DNQ11_RS28985	PF09648	YycH protein
DNQ11_RS28990	PF07435	YycH protein
DNQ11_RS28995	PF00672	HAMP domain
DNQ11_RS28995	PF00512	His Kinase A (phospho-acceptor) domain
DNQ11_RS28995	PF13426	PAS domain
DNQ11_RS28995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNQ11_RS29000	PF00072	Response regulator receiver domain
DNQ11_RS29000	PF00486	Transcriptional regulatory protein, C terminal
DNQ11_RS29025	PF00709	Adenylosuccinate synthetase
DNQ11_RS29030	PF03796	DnaB-like helicase C terminal domain
DNQ11_RS29030	PF00772	DnaB-like helicase N terminal domain
DNQ11_RS29035	PF03948	Ribosomal protein L9, C-terminal domain
DNQ11_RS29035	PF01281	Ribosomal protein L9, N-terminal domain
DNQ11_RS29040	PF02272	DHHA1 domain
DNQ11_RS29040	PF01368	DHH family
DNQ11_RS29045	PF09991	Predicted membrane protein (DUF2232)
DNQ11_RS29050	PF01084	Ribosomal protein S18
DNQ11_RS29055	PF00436	Single-strand binding protein family
DNQ11_RS29060	PF01250	Ribosomal protein S6
DNQ11_RS29065	PF01926	50S ribosome-binding GTPase
DNQ11_RS29065	PF06071	Protein of unknown function (DUF933)
DNQ11_RS29070	PF06107	Bacterial protein of unknown function (DUF951)
DNQ11_RS29075	PF00924	Mechanosensitive ion channel
DNQ11_RS29080	PF06866	Protein of unknown function (DUF1256)
DNQ11_RS29085	PF17762	HTH domain found in ParB protein
DNQ11_RS29085	PF02195	ParB-like nuclease domain
DNQ11_RS29090	PF13614	AAA domain
DNQ11_RS29095	PF17762	HTH domain found in ParB protein
DNQ11_RS29095	PF02195	ParB-like nuclease domain
DNQ11_RS29100	PF02527	rRNA small subunit methyltransferase G
DNQ11_RS29105	PF01134	Glucose inhibited division protein A
DNQ11_RS29105	PF13932	GidA associated domain
DNQ11_RS29110	PF10396	GTP-binding protein TrmE N-terminus
DNQ11_RS29110	PF01926	50S ribosome-binding GTPase
DNQ11_RS29110	PF12631	MnmE helical domain
DNQ11_RS29115	PF01424	R3H domain
DNQ11_RS29115	PF14804	Jag N-terminus
DNQ11_RS29120	PF02096	60Kd inner membrane protein
DNQ11_RS29125	PF00825	Ribonuclease P
DNQ11_RS29130	PF00468	Ribosomal protein L34
DNQ11_RS29145	PF08378	Nuclease-related domain
DNQ11_RS29185	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
DNQ11_RS29280	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
DNQ11_RS29345	PF18765	Polymerase beta, Nucleotidyltransferase
DNQ11_RS29345	PF13427	Domain of unknown function (DUF4111)
DNQ11_RS29385	PF01609	Transposase DDE domain
DNQ11_RS29390	PF01609	Transposase DDE domain
DNQ11_RS29400	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
DNQ11_RS29400	PF17854	FtsK alpha domain
DNQ11_RS29400	PF09397	Ftsk gamma domain
DNQ11_RS29400	PF01580	FtsK/SpoIIIE family
DNQ11_RS29415	PF00091	Tubulin/FtsZ family, GTPase domain
DNQ11_RS29490	PF00437	Type II/IV secretion system protein
DNQ11_RS29610	PF10087	Uncharacterized protein conserved in bacteria (DUF2325)
DNQ11_RS29625	PF04235	Protein of unknown function (DUF418)
DNQ11_RS29645	PF00395	S-layer homology domain
DNQ11_RS29650	PF01569	PAP2 superfamily
DNQ11_RS29675	PF00535	Glycosyl transferase family 2
DNQ11_RS29680	PF00483	Nucleotidyl transferase
DNQ11_RS29685	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
DNQ11_RS29685	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
DNQ11_RS29685	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
DNQ11_RS29730	PF03497	Anthrax toxin LF subunit
DNQ11_RS29730	PF07737	Anthrax toxin lethal factor, N- and C-terminal domain
DNQ11_RS29735	PF00156	Phosphoribosyl transferase domain
DNQ11_RS29740	PF00156	Phosphoribosyl transferase domain
DNQ11_RS29750	PF02660	Glycerol-3-phosphate acyltransferase
DNQ11_RS29755	PF05043	Mga helix-turn-helix domain
DNQ11_RS29755	PF00874	PRD domain
DNQ11_RS29755	PF08279	HTH domain
DNQ11_RS29760	PF09385	Histidine kinase N terminal
DNQ11_RS29780	PF01526	Tn3 transposase DDE domain
DNQ11_RS29780	PF13700	Domain of unknown function (DUF4158)
DNQ11_RS29785	PF02796	Helix-turn-helix domain of resolvase
DNQ11_RS29785	PF00239	Resolvase, N terminal domain
DNQ11_RS29790	PF03845	Spore germination protein
DNQ11_RS29795	PF03323	Bacillus/Clostridium GerA spore germination protein
DNQ11_RS29815	PF03495	Clostridial binary toxin B/anthrax toxin PA Ca-binding domain
DNQ11_RS29815	PF17475	Clostridial binary toxin B/anthrax toxin PA domain 2
DNQ11_RS29815	PF07691	PA14 domain
DNQ11_RS29815	PF17476	Clostridial binary toxin B/anthrax toxin PA domain 3
DNQ11_RS29820	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS29845	PF07737	Anthrax toxin lethal factor, N- and C-terminal domain
DNQ11_RS29845	PF09156	Anthrax toxin lethal factor, middle domain
DNQ11_RS29875	PF00589	Phage integrase family
DNQ11_RS29875	PF02899	Phage integrase, N-terminal SAM-like domain
DNQ11_RS29905	PF14436	Bacterial EndoU nuclease
DNQ11_RS29905	PF04740	LXG domain of WXG superfamily
DNQ11_RS29930	PF09223	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
DNQ11_RS29945	PF00589	Phage integrase family
DNQ11_RS29970	PF18801	response regulator aspartate phosphatase H, N terminal
DNQ11_RS29975	PF17209	Hfq protein
DNQ11_RS29980	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS29985	PF02600	Disulfide bond formation protein DsbB
DNQ11_RS30000	PF00565	Staphylococcal nuclease homologue
DNQ11_RS30010	PF01751	Toprim domain
DNQ11_RS30010	PF01131	DNA topoisomerase
DNQ11_RS30010	PF13342	C-terminal repeat of topoisomerase
DNQ11_RS30040	PF17632	Family of unknown function (DUF5513)
DNQ11_RS30050	PF00877	NlpC/P60 family
DNQ11_RS30085	PF12696	TraM recognition site of TraD and TraG
DNQ11_RS30100	PF04956	TrbC/VIRB2 family
DNQ11_RS30125	PF00437	Type II/IV secretion system protein
DNQ11_RS30165	PF17631	Family of unknown function (DUF5512)
DNQ11_RS30180	PF17362	Family of unknown function
DNQ11_RS30205	PF08708	Primase C terminal 1 (PriCT-1)
DNQ11_RS30215	PF13614	AAA domain
DNQ11_RS30230	PF00395	S-layer homology domain
DNQ11_RS30230	PF01520	N-acetylmuramoyl-L-alanine amidase
DNQ11_RS30260	PF01906	Putative heavy-metal-binding
DNQ11_RS30265	PF02517	CPBP intramembrane metalloprotease
DNQ11_RS30270	PF04463	Protein of unknown function (DUF523)
DNQ11_RS30275	PF00440	Bacterial regulatory proteins, tetR family
DNQ11_RS30285	PF01569	PAP2 superfamily
DNQ11_RS30290	PF01569	PAP2 superfamily
DNQ11_RS30300	PF05043	Mga helix-turn-helix domain
DNQ11_RS30300	PF08280	M protein trans-acting positive regulator (MGA) HTH domain
DNQ11_RS30315	PF09587	Bacterial capsule synthesis protein PGA_cap
DNQ11_RS30320	PF14102	Capsule biosynthesis CapC
DNQ11_RS30325	PF08245	Mur ligase middle domain
DNQ11_RS30340	PF01022	Bacterial regulatory protein, arsR family
DNQ11_RS30360	PF10502	Signal peptidase, peptidase S26 
DNQ11_RS30370	PF09385	Histidine kinase N terminal
DNQ11_RS30375	PF08279	HTH domain
DNQ11_RS30375	PF05043	Mga helix-turn-helix domain
DNQ11_RS30375	PF00874	PRD domain
DNQ11_RS30380	PF08279	HTH domain
DNQ11_RS30380	PF05043	Mga helix-turn-helix domain
DNQ11_RS30380	PF00874	PRD domain
DNQ11_RS30385	PF01810	LysE type translocator
DNQ11_RS30395	PF00874	PRD domain
DNQ11_RS30395	PF05043	Mga helix-turn-helix domain
DNQ11_RS30395	PF08280	M protein trans-acting positive regulator (MGA) HTH domain
DNQ11_RS30425	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
DNQ11_RS30435	PF13152	Protein of unknown function (DUF3967)
DNQ11_RS30435	PF13411	MerR HTH family regulatory protein
DNQ11_RS30440	PF11798	IMS family HHH motif
DNQ11_RS30440	PF11799	impB/mucB/samB family C-terminal domain
DNQ11_RS30440	PF00817	impB/mucB/samB family
DNQ11_RS30460	PF17443	Uncharacterized protein pXO2-72
DNQ11_RS30500	PF13154	Protein of unknown function (DUF3991)
DNQ11_RS30515	PF18840	Large polyvalent protein associated domain 25
DNQ11_RS30520	PF17630	Family of unknown function (DUF5511)
DNQ11_RS30525	PF17633	Family of unknown function (DUF5514)
