locus-tag	class	description
DNQ11_RS00010	COG0592	DNA-directed DNA polymerase activity
DNQ11_RS00015	COG2501	S4 domain
DNQ11_RS00025	COG0187	DNA topoisomerase II activity
DNQ11_RS00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNQ11_RS00065	COG0517	IMP dehydrogenase activity
DNQ11_RS00065	COG0516	GMP reductase activity
DNQ11_RS00070	COG1686	Belongs to the peptidase S11 family
DNQ11_RS00100	COG1428	Deoxynucleoside kinase
DNQ11_RS00105	COG1428	Deoxynucleoside kinase
DNQ11_RS00110	COG1335	isochorismatase
DNQ11_RS00120	COG0590	tRNA wobble adenosine to inosine editing
DNQ11_RS00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DNQ11_RS00185	COG1982	Orn Lys Arg decarboxylase major
DNQ11_RS00195	COG0470	DNA polymerase III
DNQ11_RS00200	COG1774	PSP1 C-terminal conserved region
DNQ11_RS00210	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DNQ11_RS00220	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DNQ11_RS00225	COG2002	toxin-antitoxin pair type II binding
DNQ11_RS00230	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNQ11_RS00230	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNQ11_RS00235	COG0084	hydrolase, TatD family'
DNQ11_RS00240	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DNQ11_RS00255	COG4466	Protein conserved in bacteria
DNQ11_RS00270	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DNQ11_RS00280	COG0251	oxidation-reduction process
DNQ11_RS00310	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DNQ11_RS00315	COG2002	toxin-antitoxin pair type II binding
DNQ11_RS00320	COG2244	polysaccharide biosynthetic process
DNQ11_RS00325	COG3956	TIGRFAM MazG family protein
DNQ11_RS00330	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DNQ11_RS00350	COG1098	S1 RNA binding domain
DNQ11_RS00365	COG2208	phosphoserine phosphatase activity
DNQ11_RS00370	COG0037	tRNA processing
DNQ11_RS00375	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
DNQ11_RS00380	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DNQ11_RS00395	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DNQ11_RS00400	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DNQ11_RS00405	COG0512	Glutamine amidotransferase of anthranilate synthase
DNQ11_RS00410	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DNQ11_RS00415	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DNQ11_RS00420	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DNQ11_RS00425	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DNQ11_RS00430	COG1396	sequence-specific DNA binding
DNQ11_RS00435	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DNQ11_RS00465	COG3880	PFAM UvrB UvrC protein
DNQ11_RS00475	COG0542	response to heat
DNQ11_RS00480	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DNQ11_RS00490	COG4956	integral membrane protein (PIN domain superfamily)
DNQ11_RS00510	COG1045	serine acetyltransferase
DNQ11_RS00525	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNQ11_RS00530	COG3688	RNA-binding protein containing a PIN domain
DNQ11_RS00545	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DNQ11_RS00550	COG0250	Participates in transcription elongation, termination and antitermination
DNQ11_RS00555	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DNQ11_RS00575	COG2813	Specifically methylates the guanine in position
DNQ11_RS00585	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNQ11_RS00590	COG1358	cellular component organization or biogenesis
DNQ11_RS00660	COG0255	Belongs to the universal ribosomal protein uL29 family
DNQ11_RS00720	COG0201	protein transport
DNQ11_RS00730	COG0024	Methionine aminopeptidase
DNQ11_RS00740	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DNQ11_RS00775	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DNQ11_RS00800	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNQ11_RS00805	COG0489	protein tyrosine kinase activity
DNQ11_RS00815	COG2194	sulfuric ester hydrolase activity
DNQ11_RS00820	COG0726	polysaccharide deacetylase
DNQ11_RS00905	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DNQ11_RS00910	COG4856	YbbR-like protein
DNQ11_RS00925	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DNQ11_RS00930	COG0596	Alpha beta hydrolase
DNQ11_RS00950	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DNQ11_RS00960	COG0823	Involved in the tonB-independent uptake of proteins
DNQ11_RS00960	COG1506	peptidase
DNQ11_RS00960	COG4946	Tricorn protease homolog
DNQ11_RS00995	COG2011	ABC-type metal ion transport system permease component
DNQ11_RS01000	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNQ11_RS01005	COG1464	Belongs to the NlpA lipoprotein family
DNQ11_RS01010	COG0604	alcohol dehydrogenase
DNQ11_RS01020	COG0277	FAD linked oxidase domain protein
DNQ11_RS01025	COG2271	Major facilitator Superfamily
DNQ11_RS01035	COG2814	Major facilitator Superfamily
DNQ11_RS01050	COG0601	transmembrane transport
DNQ11_RS01055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNQ11_RS01060	COG0444	Belongs to the ABC transporter superfamily
DNQ11_RS01065	COG4608	Belongs to the ABC transporter superfamily
DNQ11_RS01070	COG4166	transmembrane transport
DNQ11_RS01080	COG2207	Transcriptional regulator
DNQ11_RS01095	COG4166	transmembrane transport
DNQ11_RS01100	COG4166	transmembrane transport
DNQ11_RS01105	COG0656	L-ascorbic acid biosynthetic process
DNQ11_RS01110	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNQ11_RS01130	COG4149	molybdate abc transporter
DNQ11_RS01140	COG1910	domain protein
DNQ11_RS01155	COG0583	DNA-binding transcription factor activity
DNQ11_RS01160	COG0697	spore germination
DNQ11_RS01175	COG0204	Acyl-transferase
DNQ11_RS01190	COG1609	Transcriptional regulator
DNQ11_RS01200	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS01215	COG0084	hydrolase, TatD family'
DNQ11_RS01220	COG5298	Protein conserved in bacteria
DNQ11_RS01245	COG0488	(ABC) transporter
DNQ11_RS01260	COG0747	negative chemotaxis
DNQ11_RS01265	COG0601	transmembrane transport
DNQ11_RS01270	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNQ11_RS01275	COG0444	Belongs to the ABC transporter superfamily
DNQ11_RS01280	COG4608	Belongs to the ABC transporter superfamily
DNQ11_RS01320	COG3185	4-Hydroxyphenylpyruvate dioxygenase
DNQ11_RS01325	COG0179	Fumarylacetoacetate (FAA) hydrolase
DNQ11_RS01340	COG2814	Major facilitator Superfamily
DNQ11_RS01350	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DNQ11_RS01360	COG4294	response to UV
DNQ11_RS01365	COG0705	Rhomboid family
DNQ11_RS01365	COG0457	Tetratricopeptide repeat
DNQ11_RS01375	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
DNQ11_RS01380	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DNQ11_RS01385	COG0864	Transcriptional regulator
DNQ11_RS01390	COG2337	Toxic component of a toxin-antitoxin (TA) module
DNQ11_RS01395	COG2183	response to ionizing radiation
DNQ11_RS01490	COG0802	atpase or kinase
DNQ11_RS01495	COG1214	PFAM Peptidase M22, glycoprotease
DNQ11_RS01500	COG0456	acetyltransferase
DNQ11_RS01510	COG0488	(ABC) transporter
DNQ11_RS01525	COG1266	CAAX protease self-immunity
DNQ11_RS01545	COG2252	PERMEase
DNQ11_RS01555	COG5002	protein histidine kinase activity
DNQ11_RS01590	COG2226	methyltransferase
DNQ11_RS01635	COG1968	undecaprenyl-diphosphatase activity
DNQ11_RS01650	COG2205	protein histidine kinase activity
DNQ11_RS01655	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS01680	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DNQ11_RS01685	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DNQ11_RS01690	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DNQ11_RS01700	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DNQ11_RS01715	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DNQ11_RS01725	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DNQ11_RS01735	COG0151	Belongs to the GarS family
DNQ11_RS01765	COG0210	DNA helicase
DNQ11_RS01775	COG4851	CamS sex pheromone cAM373 precursor
DNQ11_RS01795	COG1335	isochorismatase
DNQ11_RS01805	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNQ11_RS01810	COG2011	ABC-type metal ion transport system permease component
DNQ11_RS01815	COG1464	Belongs to the NlpA lipoprotein family
DNQ11_RS01835	COG1846	Transcriptional regulator
DNQ11_RS01860	COG1597	lipid kinase activity
DNQ11_RS01865	COG0546	phosphoglycolate phosphatase activity
DNQ11_RS01870	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DNQ11_RS01880	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_RS01885	COG2076	Multidrug Resistance protein
DNQ11_RS01890	COG2309	aminopeptidase activity
DNQ11_RS01905	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_RS01910	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DNQ11_RS01915	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DNQ11_RS01925	COG4807	Protein conserved in bacteria
DNQ11_RS01950	COG1757	Na H antiporter
DNQ11_RS01955	COG1473	amidohydrolase
DNQ11_RS01970	COG0450	alkyl hydroperoxide reductase
DNQ11_RS01990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_RS01995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_RS02000	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_RS02025	COG0166	Belongs to the GPI family
DNQ11_RS02070	COG5002	protein histidine kinase activity
DNQ11_RS02090	COG3541	Predicted nucleotidyltransferase
DNQ11_RS02095	COG2814	Major facilitator Superfamily
DNQ11_RS02100	COG0723	plastoquinol--plastocyanin reductase activity
DNQ11_RS02100	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DNQ11_RS02110	COG0765	amino acid transport
DNQ11_RS02115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DNQ11_RS02130	COG0840	transmembrane signaling receptor activity
DNQ11_RS02135	COG0840	transmembrane signaling receptor activity
DNQ11_RS02140	COG0366	Alpha amylase catalytic
DNQ11_RS02145	COG2190	(PTS) system
DNQ11_RS02145	COG1263	PTS System
DNQ11_RS02145	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_RS02175	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DNQ11_RS02190	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DNQ11_RS02200	COG1116	anion transmembrane transporter activity
DNQ11_RS02205	COG0488	(ABC) transporter
DNQ11_RS02250	COG2270	Major facilitator Superfamily
DNQ11_RS02265	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DNQ11_RS02280	COG2310	stress, protein
DNQ11_RS02285	COG2310	stress, protein
DNQ11_RS02290	COG2310	stress, protein
DNQ11_RS02295	COG0861	Integral membrane protein TerC family
DNQ11_RS02305	COG3853	Toxic anion resistance protein (TelA)
DNQ11_RS02320	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DNQ11_RS02330	COG1295	ribonuclease BN
DNQ11_RS02340	COG2217	Heavy metal translocating P-type atpase
DNQ11_RS02345	COG0697	spore germination
DNQ11_RS02365	COG0586	Pfam SNARE associated Golgi protein
DNQ11_RS02380	COG3871	stress protein (general stress protein 26)
DNQ11_RS02385	COG0387	Pfam Sodium calcium exchanger
DNQ11_RS02395	COG0535	radical SAM domain protein
DNQ11_RS02420	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DNQ11_RS02425	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DNQ11_RS02430	COG0582	viral genome integration into host DNA
DNQ11_RS02435	COG1396	sequence-specific DNA binding
DNQ11_RS02455	COG1396	sequence-specific DNA binding
DNQ11_RS02490	COG1484	DNA-dependent DNA replication
DNQ11_RS02595	COG0582	viral genome integration into host DNA
DNQ11_RS02600	COG0582	viral genome integration into host DNA
DNQ11_RS02745	COG0101	tRNA pseudouridine synthase activity
DNQ11_RS02755	COG3829	transcription factor binding
DNQ11_RS02765	COG0833	amino acid
DNQ11_RS02770	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DNQ11_RS02810	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_RS02810	COG1263	PTS System
DNQ11_RS02815	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNQ11_RS02830	COG0463	Glycosyl transferase, family 2
DNQ11_RS02845	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DNQ11_RS02845	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DNQ11_RS02865	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DNQ11_RS02885	COG1228	amidohydrolase
DNQ11_RS02890	COG1090	epimerase
DNQ11_RS02920	COG1988	membrane-bound metal-dependent
DNQ11_RS02925	COG1194	a g-specific adenine glycosylase
DNQ11_RS02950	COG1132	(ABC) transporter
DNQ11_RS02955	COG4129	membrane
DNQ11_RS02960	COG0069	glutamate synthase activity
DNQ11_RS02960	COG0070	glutamate synthase
DNQ11_RS02960	COG0067	glutamate synthase
DNQ11_RS02970	COG4555	ABC transporter
DNQ11_RS02990	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DNQ11_RS02995	COG0735	belongs to the Fur family
DNQ11_RS03115	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DNQ11_RS03120	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DNQ11_RS03130	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DNQ11_RS03140	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DNQ11_RS03155	COG2766	serine protein kinase
DNQ11_RS03185	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DNQ11_RS03195	COG1585	Membrane protein implicated in regulation of membrane protease activity
DNQ11_RS03200	COG2268	Band 7 protein
DNQ11_RS03210	COG3290	protein histidine kinase activity
DNQ11_RS03215	COG4565	transcriptional regulatory protein
DNQ11_RS03220	COG2851	Citrate transporter
DNQ11_RS03245	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DNQ11_RS03250	COG3842	ATPase activity
DNQ11_RS03255	COG1175	transmembrane transport
DNQ11_RS03260	COG0395	ABC-type sugar transport system, permease component
DNQ11_RS03270	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DNQ11_RS03275	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS03280	COG5002	protein histidine kinase activity
DNQ11_RS03290	COG4990	cell redox homeostasis
DNQ11_RS03300	COG3290	protein histidine kinase activity
DNQ11_RS03305	COG4565	transcriptional regulatory protein
DNQ11_RS03310	COG3493	citrate carrier protein
DNQ11_RS03315	COG0281	malic enzyme
DNQ11_RS03330	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_RS03340	COG5002	protein histidine kinase activity
DNQ11_RS03345	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS03355	COG0454	-acetyltransferase
DNQ11_RS03355	COG0456	acetyltransferase
DNQ11_RS03360	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DNQ11_RS03365	COG3383	formate dehydrogenase (NAD+) activity
DNQ11_RS03370	COG2427	Protein of unknown function (DUF1641)
DNQ11_RS03385	COG0531	amino acid
DNQ11_RS03395	COG0640	Transcriptional regulator
DNQ11_RS03400	COG2217	Heavy metal translocating P-type atpase
DNQ11_RS03405	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DNQ11_RS03420	COG3227	Zinc metalloprotease (Elastase)
DNQ11_RS03440	COG2720	vancomycin resistance protein
DNQ11_RS03445	COG1316	TRANSCRIPTIONal
DNQ11_RS03450	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_RS03455	COG0346	lactoylglutathione lyase activity
DNQ11_RS03460	COG1253	flavin adenine dinucleotide binding
DNQ11_RS03465	COG1027	Aspartate ammonia-lyase
DNQ11_RS03470	COG1620	l-lactate permease
DNQ11_RS03485	COG3104	oligopeptide transport
DNQ11_RS03490	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_RS03495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_RS03500	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_RS03510	COG2226	methyltransferase
DNQ11_RS03515	COG0156	8-amino-7-oxononanoate synthase activity
DNQ11_RS03520	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DNQ11_RS03530	COG4548	von Willebrand factor, type A
DNQ11_RS03535	COG0714	Associated with various cellular activities
DNQ11_RS03540	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNQ11_RS03560	COG0531	amino acid
DNQ11_RS03565	COG2188	Transcriptional regulator
DNQ11_RS03570	COG1263	PTS System
DNQ11_RS03570	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_RS03575	COG0366	Alpha amylase catalytic
DNQ11_RS03590	COG0697	spore germination
DNQ11_RS03600	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DNQ11_RS03605	COG1115	amino acid carrier protein
DNQ11_RS03610	COG1126	abc transporter atp-binding protein
DNQ11_RS03615	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DNQ11_RS03620	COG0765	amino acid transport
DNQ11_RS03625	COG0765	amino acid transport
DNQ11_RS03630	COG0833	amino acid
DNQ11_RS03655	COG2378	regulation of single-species biofilm formation
DNQ11_RS03660	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DNQ11_RS03665	COG5002	protein histidine kinase activity
DNQ11_RS03680	COG0659	secondary active sulfate transmembrane transporter activity
DNQ11_RS03695	COG0747	negative chemotaxis
DNQ11_RS03705	COG0601	transmembrane transport
DNQ11_RS03710	COG4608	Belongs to the ABC transporter superfamily
DNQ11_RS03720	COG2271	Major facilitator Superfamily
DNQ11_RS03725	COG1846	Transcriptional regulator
DNQ11_RS03735	COG1609	Transcriptional regulator
DNQ11_RS03740	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNQ11_RS03755	COG1172	Belongs to the binding-protein-dependent transport system permease family
DNQ11_RS03760	COG1879	ABC-type sugar transport system periplasmic component
DNQ11_RS03785	COG1063	alcohol dehydrogenase
DNQ11_RS03800	COG3568	Endonuclease Exonuclease Phosphatase
DNQ11_RS03825	COG1968	undecaprenyl-diphosphatase activity
DNQ11_RS03830	COG0840	transmembrane signaling receptor activity
DNQ11_RS03835	COG3584	3D domain protein
DNQ11_RS03835	COG1388	LysM domain
DNQ11_RS03840	COG1476	TRANSCRIPTIONal
DNQ11_RS03855	COG3104	oligopeptide transport
DNQ11_RS03860	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_RS03875	COG1113	amino acid transport
DNQ11_RS03880	COG2252	PERMEase
DNQ11_RS03905	COG0475	glutathione-regulated potassium exporter activity
DNQ11_RS03905	COG0569	domain protein
DNQ11_RS03920	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DNQ11_RS03925	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DNQ11_RS03930	COG0833	amino acid
DNQ11_RS03935	COG4990	cell redox homeostasis
DNQ11_RS03950	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNQ11_RS03955	COG0697	spore germination
DNQ11_RS03960	COG0531	amino acid
DNQ11_RS03975	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DNQ11_RS03980	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DNQ11_RS03985	COG1918	ferrous iron import across plasma membrane
DNQ11_RS03985	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DNQ11_RS03990	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DNQ11_RS03995	COG0573	inorganic phosphate transmembrane transporter activity
DNQ11_RS04000	COG0581	inorganic phosphate transmembrane transporter activity
DNQ11_RS04010	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DNQ11_RS04130	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
DNQ11_RS04155	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DNQ11_RS04160	COG1116	anion transmembrane transporter activity
DNQ11_RS04165	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DNQ11_RS04170	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DNQ11_RS04175	COG0352	thiamine-phosphate diphosphorylase activity
DNQ11_RS04180	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DNQ11_RS04185	COG2104	thiamine diphosphate biosynthetic process
DNQ11_RS04195	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DNQ11_RS04200	COG0351	phosphomethylpyrimidine kinase
DNQ11_RS04245	COG2205	protein histidine kinase activity
DNQ11_RS04250	COG2814	Major facilitator Superfamily
DNQ11_RS04255	COG1846	Transcriptional regulator
DNQ11_RS04270	COG2252	PERMEase
DNQ11_RS04275	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS04290	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNQ11_RS04295	COG1621	beta-fructofuranosidase activity
DNQ11_RS04300	COG1263	PTS System
DNQ11_RS04300	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_RS04305	COG1609	Transcriptional regulator
DNQ11_RS04315	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNQ11_RS04320	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
DNQ11_RS04360	COG0778	Nitroreductase
DNQ11_RS04365	COG2719	SpoVR family
DNQ11_RS04395	COG0446	pyridine nucleotide-disulphide oxidoreductase
DNQ11_RS04400	COG1937	Protein conserved in bacteria
DNQ11_RS04405	COG0425	Belongs to the sulfur carrier protein TusA family
DNQ11_RS04405	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_RS04410	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_RS04410	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_RS04415	COG0425	Belongs to the sulfur carrier protein TusA family
DNQ11_RS04420	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_RS04430	COG2210	Belongs to the sulfur carrier protein TusA family
DNQ11_RS04435	COG0730	response to heat
DNQ11_RS04445	COG1316	TRANSCRIPTIONal
DNQ11_RS04450	COG0604	alcohol dehydrogenase
DNQ11_RS04455	COG1283	sodium-dependent phosphate transmembrane transporter activity
DNQ11_RS04470	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNQ11_RS04470	COG3711	transcriptional antiterminator
DNQ11_RS04475	COG1447	Phosphotransferase system cellobiose-specific component IIA
DNQ11_RS04480	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DNQ11_RS04500	COG1388	LysM domain
DNQ11_RS04500	COG3584	3D domain protein
DNQ11_RS04505	COG0577	efflux transmembrane transporter activity
DNQ11_RS04510	COG1136	(ABC) transporter
DNQ11_RS04520	COG5522	Integral membrane protein (intg_mem_TP0381)
DNQ11_RS04535	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_RS04540	COG3546	catalase activity
DNQ11_RS04575	COG0586	Pfam SNARE associated Golgi protein
DNQ11_RS04615	COG0531	amino acid
DNQ11_RS04620	COG0475	glutathione-regulated potassium exporter activity
DNQ11_RS04630	COG1737	Transcriptional regulator
DNQ11_RS04640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_RS04640	COG1263	PTS System
DNQ11_RS04650	COG2259	Doxx family
DNQ11_RS04665	COG0697	spore germination
DNQ11_RS04670	COG1522	sequence-specific DNA binding
DNQ11_RS04685	COG2076	Multidrug Resistance protein
DNQ11_RS04690	COG1309	transcriptional regulator
DNQ11_RS04695	COG2814	Major facilitator Superfamily
DNQ11_RS04700	COG1733	regulation of RNA biosynthetic process
DNQ11_RS04710	COG2249	NAD(P)H dehydrogenase (quinone) activity
DNQ11_RS04715	COG4533	DNA binding
DNQ11_RS04720	COG2211	Major facilitator Superfamily
DNQ11_RS04730	COG0693	protein deglycase activity
DNQ11_RS04735	COG0753	catalase activity
DNQ11_RS04735	COG0693	protein deglycase activity
DNQ11_RS04745	COG0531	amino acid
DNQ11_RS04750	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DNQ11_RS04760	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_RS04780	COG1132	(ABC) transporter
DNQ11_RS04795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DNQ11_RS04800	COG0765	amino acid transport
DNQ11_RS04805	COG1126	abc transporter atp-binding protein
DNQ11_RS04820	COG0189	ligase activity
DNQ11_RS04850	COG0028	Belongs to the TPP enzyme family
DNQ11_RS04855	COG3527	Alpha-acetolactate decarboxylase
DNQ11_RS04870	COG0561	phosphatase activity
DNQ11_RS04880	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNQ11_RS04880	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_RS04890	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DNQ11_RS04905	COG0659	secondary active sulfate transmembrane transporter activity
DNQ11_RS04925	COG0653	protein targeting
DNQ11_RS04930	COG2244	polysaccharide biosynthetic process
DNQ11_RS04940	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNQ11_RS04945	COG4196	transglutaminase domain protein
DNQ11_RS04960	COG1696	Membrane protein involved in D-alanine export
DNQ11_RS04980	COG1024	Enoyl-CoA hydratase
DNQ11_RS05000	COG1363	Peptidase, m42
DNQ11_RS05020	COG3938	Belongs to the proline racemase family
DNQ11_RS05055	COG0601	transmembrane transport
DNQ11_RS05060	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNQ11_RS05070	COG4608	Belongs to the ABC transporter superfamily
DNQ11_RS05080	COG0322	excinuclease ABC activity
DNQ11_RS05115	COG0477	Major facilitator Superfamily
DNQ11_RS05120	COG3290	protein histidine kinase activity
DNQ11_RS05125	COG4565	transcriptional regulatory protein
DNQ11_RS05130	COG3181	Tripartite tricarboxylate transporter family receptor
DNQ11_RS05160	COG4978	Transcriptional regulator
DNQ11_RS05160	COG0789	Transcriptional regulator
DNQ11_RS05175	COG0305	Participates in initiation and elongation during chromosome replication
DNQ11_RS05225	COG0477	Major facilitator Superfamily
DNQ11_RS05280	COG1309	transcriptional regulator
DNQ11_RS05300	COG1183	phosphatidylcholine synthase activity
DNQ11_RS05325	COG2376	Dihydroxyacetone kinase
DNQ11_RS05340	COG2376	Dihydroxyacetone kinase
DNQ11_RS05345	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DNQ11_RS05350	COG1959	2 iron, 2 sulfur cluster binding
DNQ11_RS05385	COG2770	Histidine kinase
DNQ11_RS05385	COG3437	response regulator, receiver
DNQ11_RS05450	COG3237	CsbD-like
DNQ11_RS05475	COG1191	sigma factor activity
DNQ11_RS05485	COG2208	phosphoserine phosphatase activity
DNQ11_RS05490	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DNQ11_RS05495	COG2198	Histidine kinase
DNQ11_RS05495	COG2205	protein histidine kinase activity
DNQ11_RS05495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DNQ11_RS05495	COG0784	Response regulator, receiver
DNQ11_RS05555	COG0420	3'-5' exonuclease activity
DNQ11_RS05560	COG4717	serine-type aminopeptidase activity
DNQ11_RS05580	COG1309	transcriptional regulator
DNQ11_RS05585	COG2814	Major facilitator Superfamily
DNQ11_RS05590	COG0346	lactoylglutathione lyase activity
DNQ11_RS05600	COG0346	lactoylglutathione lyase activity
DNQ11_RS05605	COG0457	Tetratricopeptide repeat
DNQ11_RS05615	COG2267	carboxylic ester hydrolase activity
DNQ11_RS05635	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DNQ11_RS05640	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DNQ11_RS05650	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DNQ11_RS05695	COG0477	Major facilitator Superfamily
DNQ11_RS05700	COG0477	Major facilitator Superfamily
DNQ11_RS05710	COG3973	AAA domain
DNQ11_RS05715	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DNQ11_RS05740	COG4980	gas vesicle protein
DNQ11_RS05745	COG0537	adenosine 5'-monophosphoramidase activity
DNQ11_RS05755	COG1131	(ABC) transporter
DNQ11_RS05760	COG4473	ABC transporter
DNQ11_RS05775	COG1309	transcriptional regulator
DNQ11_RS05785	COG3402	PFAM membrane-flanked domain
DNQ11_RS05835	COG3402	PFAM membrane-flanked domain
DNQ11_RS05840	COG3428	Bacterial PH domain
DNQ11_RS05845	COG2329	Antibiotic biosynthesis monooxygenase
DNQ11_RS05850	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNQ11_RS05855	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
DNQ11_RS05860	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
DNQ11_RS05865	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
DNQ11_RS05900	COG1309	transcriptional regulator
DNQ11_RS05930	COG1609	Transcriptional regulator
DNQ11_RS05940	COG1234	tRNA 3'-trailer cleavage
DNQ11_RS05945	COG0095	Lipoate-protein ligase
DNQ11_RS05955	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_RS05985	COG3209	COG3209 Rhs family protein
DNQ11_RS06030	COG1078	dGTPase activity
DNQ11_RS06040	COG1595	DNA-templated transcription, initiation
DNQ11_RS06045	COG3708	Transcriptional regulator
DNQ11_RS06045	COG2207	Transcriptional regulator
DNQ11_RS06060	COG2205	protein histidine kinase activity
DNQ11_RS06065	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS06090	COG0501	Belongs to the peptidase M48B family
DNQ11_RS06095	COG0840	transmembrane signaling receptor activity
DNQ11_RS06100	COG0697	spore germination
DNQ11_RS06120	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DNQ11_RS06125	COG2224	Isocitrate lyase
DNQ11_RS06150	COG4903	ComK protein
DNQ11_RS06155	COG0398	Pfam SNARE associated Golgi protein
DNQ11_RS06165	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
DNQ11_RS06170	COG1074	ATP-dependent DNA helicase activity
DNQ11_RS06215	COG0179	Fumarylacetoacetate (FAA) hydrolase
DNQ11_RS06240	COG0367	asparagine synthase
DNQ11_RS06245	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
DNQ11_RS06250	COG0753	catalase activity
DNQ11_RS06255	COG0004	ammonium transporteR
DNQ11_RS06280	COG2996	Protein conserved in bacteria
DNQ11_RS06290	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DNQ11_RS06300	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS06315	COG0561	phosphatase activity
DNQ11_RS06330	COG0542	response to heat
DNQ11_RS06340	COG2267	carboxylic ester hydrolase activity
DNQ11_RS06360	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_RS06365	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DNQ11_RS06370	COG5504	Zn-dependent protease
DNQ11_RS06385	COG0180	Tryptophanyl-tRNA synthetase
DNQ11_RS06400	COG4166	transmembrane transport
DNQ11_RS06405	COG0601	transmembrane transport
DNQ11_RS06410	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNQ11_RS06415	COG0444	Belongs to the ABC transporter superfamily
DNQ11_RS06420	COG4608	Belongs to the ABC transporter superfamily
DNQ11_RS06425	COG0534	Mate efflux family protein
DNQ11_RS06430	COG4166	transmembrane transport
DNQ11_RS06450	COG0861	Integral membrane protein TerC family
DNQ11_RS06455	COG4862	establishment of competence for transformation
DNQ11_RS06460	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNQ11_RS06470	COG1164	Oligoendopeptidase f
DNQ11_RS06480	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DNQ11_RS06485	COG2346	COG2346, Truncated hemoglobins
DNQ11_RS06490	COG4116	CYTH
DNQ11_RS06500	COG2357	RelA SpoT domain protein
DNQ11_RS06510	COG0564	pseudouridine synthase activity
DNQ11_RS06530	COG1216	Glycosyl transferase, family 2
DNQ11_RS06530	COG0463	Glycosyl transferase, family 2
DNQ11_RS06550	COG0463	Glycosyl transferase, family 2
DNQ11_RS06550	COG0457	Tetratricopeptide repeat
DNQ11_RS06570	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DNQ11_RS06585	COG1091	dTDP-4-dehydrorhamnose reductase activity
DNQ11_RS06630	COG2153	protein acetylation
DNQ11_RS06640	COG2382	esterase
DNQ11_RS06655	COG5492	domain, Protein
DNQ11_RS06660	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNQ11_RS06675	COG0512	Glutamine amidotransferase of anthranilate synthase
DNQ11_RS06675	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DNQ11_RS06710	COG1620	l-lactate permease
DNQ11_RS06715	COG5634	Uncharacterized conserved protein (DUF2278)
DNQ11_RS06775	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNQ11_RS06785	COG1476	TRANSCRIPTIONal
DNQ11_RS06845	COG2226	methyltransferase
DNQ11_RS06860	COG1686	Belongs to the peptidase S11 family
DNQ11_RS06865	COG0681	Belongs to the peptidase S26 family
DNQ11_RS06900	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_RS06905	COG3842	ATPase activity
DNQ11_RS06910	COG1176	ABC-type spermidine putrescine transport system, permease component I
DNQ11_RS06915	COG1177	transmembrane transport
DNQ11_RS06920	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DNQ11_RS06930	COG2409	Drug exporters of the RND superfamily
DNQ11_RS06940	COG0564	pseudouridine synthase activity
DNQ11_RS06950	COG2340	Cysteine-rich secretory protein family
DNQ11_RS06955	COG0247	lactate metabolic process
DNQ11_RS06960	COG0277	FAD linked oxidase domain protein
DNQ11_RS06965	COG3835	regulator
DNQ11_RS06975	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS06980	COG5002	protein histidine kinase activity
DNQ11_RS06985	COG2186	Transcriptional regulator
DNQ11_RS07005	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DNQ11_RS07015	COG2116	formate transmembrane transporter activity
DNQ11_RS07020	COG0861	Integral membrane protein TerC family
DNQ11_RS07025	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DNQ11_RS07035	COG2030	dehydratase
DNQ11_RS07055	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS07060	COG3243	poly(R)-hydroxyalkanoic acid synthase
DNQ11_RS07065	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DNQ11_RS07070	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DNQ11_RS07090	COG1840	ABC-type Fe3 transport system, periplasmic component
DNQ11_RS07120	COG1349	DNA-binding transcription factor activity
DNQ11_RS07145	COG2861	carbohydrate metabolic process
DNQ11_RS07155	COG3852	Histidine kinase
DNQ11_RS07160	COG1846	Transcriptional regulator
DNQ11_RS07170	COG2318	DinB family
DNQ11_RS07180	COG5002	protein histidine kinase activity
DNQ11_RS07190	COG0720	synthase
DNQ11_RS07205	COG4873	Protein conserved in bacteria
DNQ11_RS07240	COG1780	Probably involved in ribonucleotide reductase function
DNQ11_RS07260	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DNQ11_RS07265	COG1725	Transcriptional regulator
DNQ11_RS07270	COG1131	(ABC) transporter
DNQ11_RS07280	COG1131	(ABC) transporter
DNQ11_RS07285	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DNQ11_RS07300	COG1522	sequence-specific DNA binding
DNQ11_RS07310	COG1335	isochorismatase
DNQ11_RS07320	COG1619	proteins homologs of microcin C7 resistance protein MccF
DNQ11_RS07325	COG2070	2-Nitropropane dioxygenase
DNQ11_RS07330	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DNQ11_RS07340	COG1696	Membrane protein involved in D-alanine export
DNQ11_RS07365	COG0716	FMN binding
DNQ11_RS07380	COG3173	Aminoglycoside phosphotransferase
DNQ11_RS07405	COG0534	Mate efflux family protein
DNQ11_RS07410	COG1968	undecaprenyl-diphosphatase activity
DNQ11_RS07425	COG1846	Transcriptional regulator
DNQ11_RS07435	COG1301	dicarboxylic acid transport
DNQ11_RS07440	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DNQ11_RS07445	COG4709	membrane
DNQ11_RS07450	COG3874	Sporulation protein YtfJ
DNQ11_RS07480	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DNQ11_RS07485	COG0028	Belongs to the TPP enzyme family
DNQ11_RS07490	COG0440	acetolactate synthase activity
DNQ11_RS07495	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DNQ11_RS07505	COG0473	3-isopropylmalate dehydrogenase activity
DNQ11_RS07530	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DNQ11_RS07565	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DNQ11_RS07580	COG1183	phosphatidylcholine synthase activity
DNQ11_RS07585	COG1368	sulfuric ester hydrolase activity
DNQ11_RS07595	COG0019	diaminopimelate decarboxylase activity
DNQ11_RS07615	COG0529	Catalyzes the synthesis of activated sulfate
DNQ11_RS07620	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DNQ11_RS07640	COG1648	precorrin-2 dehydrogenase activity
DNQ11_RS07650	COG0733	neurotransmitter:sodium symporter activity
DNQ11_RS07670	COG1757	Na H antiporter
DNQ11_RS07685	COG4758	membrane
DNQ11_RS07690	COG4585	Histidine kinase
DNQ11_RS07695	COG2197	response regulator
DNQ11_RS07705	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_RS07715	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DNQ11_RS07740	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DNQ11_RS07740	COG1017	nitric oxide dioxygenase activity
DNQ11_RS07760	COG0730	response to heat
DNQ11_RS07765	COG0306	phosphate transporter
DNQ11_RS07770	COG1392	Phosphate transport regulator
DNQ11_RS07775	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNQ11_RS07795	COG3852	Histidine kinase
DNQ11_RS07800	COG1801	Protein of unknown function DUF72
DNQ11_RS07810	COG0582	viral genome integration into host DNA
DNQ11_RS07815	COG5002	protein histidine kinase activity
DNQ11_RS07845	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DNQ11_RS07845	COG0392	lysyltransferase activity
DNQ11_RS07860	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DNQ11_RS07865	COG1686	Belongs to the peptidase S11 family
DNQ11_RS07870	COG2715	membrane protein required for spore maturation
DNQ11_RS07875	COG0700	Nucleoside recognition
DNQ11_RS07880	COG1187	pseudouridine synthase activity
DNQ11_RS07890	COG1333	cytochrome c biogenesis protein
DNQ11_RS07895	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DNQ11_RS07900	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS07905	COG5002	protein histidine kinase activity
DNQ11_RS07910	COG2096	Adenosyltransferase
DNQ11_RS07925	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DNQ11_RS07930	COG1141	Ferredoxin
DNQ11_RS07935	COG4955	Helix-turn-helix domain
DNQ11_RS07940	COG0514	ATP-dependent DNA helicase (RecQ)
DNQ11_RS07945	COG1266	CAAX protease self-immunity
DNQ11_RS07965	COG4862	establishment of competence for transformation
DNQ11_RS07970	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DNQ11_RS07990	COG0492	ferredoxin-NADP+ reductase activity
DNQ11_RS08065	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DNQ11_RS08080	COG0142	geranyltranstransferase activity
DNQ11_RS08090	COG0142	geranyltranstransferase activity
DNQ11_RS08110	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DNQ11_RS08115	COG0457	Tetratricopeptide repeat
DNQ11_RS08135	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DNQ11_RS08150	COG4347	Protein of unknown function (DUF1405)
DNQ11_RS08165	COG2738	Putative neutral zinc metallopeptidase
DNQ11_RS08175	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS08185	COG1694	Mazg nucleotide pyrophosphohydrolase
DNQ11_RS08200	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DNQ11_RS08205	COG0438	transferase activity, transferring glycosyl groups
DNQ11_RS08245	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DNQ11_RS08245	COG1199	ATP-dependent helicase activity
DNQ11_RS08265	COG3935	DnaD domain protein
DNQ11_RS08270	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DNQ11_RS08280	COG4499	WXG100 protein secretion system (Wss), protein YukC
DNQ11_RS08280	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNQ11_RS08340	COG0116	Belongs to the methyltransferase superfamily
DNQ11_RS08350	COG1199	ATP-dependent helicase activity
DNQ11_RS08355	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DNQ11_RS08365	COG3173	Aminoglycoside phosphotransferase
DNQ11_RS08370	COG0024	Methionine aminopeptidase
DNQ11_RS08380	COG2233	PERMEase
DNQ11_RS08385	COG2311	Membrane
DNQ11_RS08395	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DNQ11_RS08405	COG0456	acetyltransferase
DNQ11_RS08440	COG0754	glutathionylspermidine amidase activity
DNQ11_RS08455	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNQ11_RS08485	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DNQ11_RS08500	COG1215	transferase activity, transferring glycosyl groups
DNQ11_RS08505	COG0438	transferase activity, transferring glycosyl groups
DNQ11_RS08520	COG0454	-acetyltransferase
DNQ11_RS08540	COG0328	RNA-DNA hybrid ribonuclease activity
DNQ11_RS08580	COG1280	lysine exporter protein (LysE YggA)
DNQ11_RS08595	COG3162	membrane
DNQ11_RS08600	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNQ11_RS08605	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DNQ11_RS08620	COG0475	glutathione-regulated potassium exporter activity
DNQ11_RS08625	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNQ11_RS08630	COG0789	Transcriptional regulator
DNQ11_RS08630	COG4978	Transcriptional regulator
DNQ11_RS08640	COG2323	membrane
DNQ11_RS08645	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DNQ11_RS08700	COG1923	regulation of RNA biosynthetic process
DNQ11_RS08710	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DNQ11_RS08715	COG1360	Flagellar Motor Protein
DNQ11_RS08720	COG2201	protein-glutamate methylesterase activity
DNQ11_RS08730	COG1776	CheC inhibitor of MCP methylation
DNQ11_RS08730	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DNQ11_RS08745	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DNQ11_RS08765	COG1256	bacterial-type flagellum assembly
DNQ11_RS08790	COG1815	bacterial-type flagellum-dependent cell motility
DNQ11_RS08795	COG1558	bacterial-type flagellum-dependent cell motility
DNQ11_RS08810	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DNQ11_RS08820	COG1157	protein secretion by the type III secretion system
DNQ11_RS08860	COG0784	Response regulator, receiver
DNQ11_RS08860	COG0835	chemotaxis
DNQ11_RS08870	COG0463	Glycosyl transferase, family 2
DNQ11_RS08910	COG0463	Glycosyl transferase, family 2
DNQ11_RS08910	COG0457	Tetratricopeptide repeat
DNQ11_RS08925	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DNQ11_RS08930	COG0741	lytic transglycosylase activity
DNQ11_RS08945	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DNQ11_RS08945	COG1776	CheC inhibitor of MCP methylation
DNQ11_RS08955	COG1338	Plays a role in the flagellum-specific transport system
DNQ11_RS08960	COG1987	bacterial-type flagellum assembly
DNQ11_RS08970	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DNQ11_RS08975	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DNQ11_RS08980	COG1419	protein localization to endoplasmic reticulum
DNQ11_RS08985	COG4786	Flagellar basal body rod
DNQ11_RS08990	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DNQ11_RS09015	COG1309	transcriptional regulator
DNQ11_RS09035	COG2329	Antibiotic biosynthesis monooxygenase
DNQ11_RS09060	COG0583	DNA-binding transcription factor activity
DNQ11_RS09065	COG3842	ATPase activity
DNQ11_RS09070	COG0725	ABC transporter, periplasmic molybdate-binding protein
DNQ11_RS09080	COG1234	tRNA 3'-trailer cleavage
DNQ11_RS09110	COG1686	Belongs to the peptidase S11 family
DNQ11_RS09120	COG0406	alpha-ribazole phosphatase activity
DNQ11_RS09150	COG0367	asparagine synthase
DNQ11_RS09180	COG1802	Transcriptional regulator
DNQ11_RS09185	COG0697	spore germination
DNQ11_RS09190	COG0523	cobalamin synthesis protein
DNQ11_RS09200	COG0701	Predicted permease
DNQ11_RS09210	COG0438	transferase activity, transferring glycosyl groups
DNQ11_RS09210	COG1216	Glycosyl transferase, family 2
DNQ11_RS09215	COG1757	Na H antiporter
DNQ11_RS09220	COG0114	fumarate hydratase activity
DNQ11_RS09250	COG3340	Belongs to the peptidase S51 family
DNQ11_RS09270	COG0785	Cytochrome C biogenesis protein
DNQ11_RS09305	COG2733	membrane
DNQ11_RS09345	COG1131	(ABC) transporter
DNQ11_RS09360	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNQ11_RS09365	COG0528	UMP kinase activity
DNQ11_RS09375	COG1027	Aspartate ammonia-lyase
DNQ11_RS09380	COG0281	malic enzyme
DNQ11_RS09385	COG4191	Histidine kinase
DNQ11_RS09390	COG0784	Response regulator, receiver
DNQ11_RS09395	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DNQ11_RS09460	COG1051	belongs to the nudix hydrolase family
DNQ11_RS09465	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNQ11_RS09475	COG2814	Major facilitator Superfamily
DNQ11_RS09490	COG1966	Carbon starvation protein
DNQ11_RS09510	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_RS09520	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DNQ11_RS09530	COG2223	nitrite transmembrane transporter activity
DNQ11_RS09535	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DNQ11_RS09550	COG2244	polysaccharide biosynthetic process
DNQ11_RS09555	COG0733	neurotransmitter:sodium symporter activity
DNQ11_RS09565	COG5566	PFAM Mor transcription activator
DNQ11_RS09570	COG2323	membrane
DNQ11_RS09590	COG2084	Dehydrogenase
DNQ11_RS09610	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DNQ11_RS09620	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DNQ11_RS09625	COG0028	Belongs to the TPP enzyme family
DNQ11_RS09630	COG0440	acetolactate synthase activity
DNQ11_RS09635	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DNQ11_RS09645	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DNQ11_RS09670	COG2814	Major facilitator Superfamily
DNQ11_RS09675	COG3384	dioxygenase
DNQ11_RS09685	COG3279	Response regulator of the LytR AlgR family
DNQ11_RS09690	COG0427	acetyl-CoA hydrolase
DNQ11_RS09710	COG1073	alpha beta
DNQ11_RS09715	COG1131	(ABC) transporter
DNQ11_RS09720	COG4166	transmembrane transport
DNQ11_RS09755	COG0535	radical SAM domain protein
DNQ11_RS09760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_RS09780	COG1914	H( )-stimulated, divalent metal cation uptake system
DNQ11_RS09795	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNQ11_RS09830	COG2390	Transcriptional regulator
DNQ11_RS09840	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_RS09845	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
DNQ11_RS09860	COG4224	UPF0291 protein
DNQ11_RS09880	COG0006	proline dipeptidase activity
DNQ11_RS09885	COG2132	Multicopper oxidase
DNQ11_RS09900	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DNQ11_RS09915	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DNQ11_RS09930	COG1276	copper resistance
DNQ11_RS09930	COG2372	response to copper ion
DNQ11_RS09935	COG4549	nuclear export factor GLE1
DNQ11_RS09945	COG0697	spore germination
DNQ11_RS09950	COG0583	DNA-binding transcription factor activity
DNQ11_RS09955	COG1959	2 iron, 2 sulfur cluster binding
DNQ11_RS09960	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DNQ11_RS09965	COG0778	Nitroreductase
DNQ11_RS09980	COG0628	permease
DNQ11_RS09990	COG1231	oxidoreductase activity
DNQ11_RS09995	COG0523	cobalamin synthesis protein
DNQ11_RS10010	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_RS10015	COG2030	dehydratase
DNQ11_RS10020	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_RS10035	COG0411	ABC transporter
DNQ11_RS10055	COG0583	DNA-binding transcription factor activity
DNQ11_RS10075	COG1846	Transcriptional regulator
DNQ11_RS10085	COG1271	oxidase subunit
DNQ11_RS10090	COG1294	oxidase, subunit
DNQ11_RS10095	COG4988	ABC transporter
DNQ11_RS10100	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DNQ11_RS10120	COG1686	Belongs to the peptidase S11 family
DNQ11_RS10135	COG1388	LysM domain
DNQ11_RS10135	COG0791	NLP P60 protein
DNQ11_RS10150	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS10155	COG5002	protein histidine kinase activity
DNQ11_RS10165	COG0300	oxidoreductase activity
DNQ11_RS10205	COG0460	homoserine dehydrogenase
DNQ11_RS10230	COG1316	TRANSCRIPTIONal
DNQ11_RS10240	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS10245	COG5002	protein histidine kinase activity
DNQ11_RS10260	COG1285	pathogenesis
DNQ11_RS10265	COG1247	-acetyltransferase
DNQ11_RS10285	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DNQ11_RS10295	COG1082	Xylose isomerase domain protein TIM barrel
DNQ11_RS10310	COG1279	arginine transmembrane transporter activity
DNQ11_RS10325	COG1752	Esterase of the alpha-beta hydrolase superfamily
DNQ11_RS10365	COG2002	toxin-antitoxin pair type II binding
DNQ11_RS10370	COG1404	Belongs to the peptidase S8 family
DNQ11_RS10375	COG0640	Transcriptional regulator
DNQ11_RS10380	COG0667	Aldo Keto reductase
DNQ11_RS10390	COG2814	Major facilitator Superfamily
DNQ11_RS10415	COG0840	transmembrane signaling receptor activity
DNQ11_RS10435	COG3949	Membrane
DNQ11_RS10440	COG0783	Belongs to the Dps family
DNQ11_RS10455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DNQ11_RS10465	COG1231	oxidoreductase activity
DNQ11_RS10475	COG4989	oxidoreductase activity
DNQ11_RS10480	COG0523	cobalamin synthesis protein
DNQ11_RS10485	COG0456	acetyltransferase
DNQ11_RS10565	COG3443	Belongs to the bacterial solute-binding protein 9 family
DNQ11_RS10565	COG0803	Belongs to the bacterial solute-binding protein 9 family
DNQ11_RS10575	COG0702	epimerase
DNQ11_RS10585	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DNQ11_RS10595	COG4166	transmembrane transport
DNQ11_RS10610	COG0406	alpha-ribazole phosphatase activity
DNQ11_RS10620	COG5337	Spore coat protein CotH
DNQ11_RS10625	COG1051	belongs to the nudix hydrolase family
DNQ11_RS10630	COG0586	Pfam SNARE associated Golgi protein
DNQ11_RS10635	COG2244	polysaccharide biosynthetic process
DNQ11_RS10645	COG0701	Predicted permease
DNQ11_RS10650	COG3689	TIGRFAM TIGR03943 family protein
DNQ11_RS10655	COG1607	acyl-coa hydrolase
DNQ11_RS10665	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNQ11_RS10680	COG0702	epimerase
DNQ11_RS10685	COG2839	Protein conserved in bacteria
DNQ11_RS10690	COG1253	flavin adenine dinucleotide binding
DNQ11_RS10705	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_RS10710	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNQ11_RS10730	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNQ11_RS10740	COG1876	peptidase activity
DNQ11_RS10750	COG0154	amidase activity
DNQ11_RS10755	COG2211	Major facilitator Superfamily
DNQ11_RS10775	COG0561	phosphatase activity
DNQ11_RS10785	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DNQ11_RS10790	COG4106	trans-aconitate 2-methyltransferase activity
DNQ11_RS10805	COG1819	glycosyl
DNQ11_RS10810	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS10815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_RS10845	COG0456	acetyltransferase
DNQ11_RS10905	COG3874	Sporulation protein YtfJ
DNQ11_RS10930	COG2226	methyltransferase
DNQ11_RS10950	COG1082	Xylose isomerase domain protein TIM barrel
DNQ11_RS10955	COG0346	lactoylglutathione lyase activity
DNQ11_RS10965	COG0604	alcohol dehydrogenase
DNQ11_RS10970	COG1595	DNA-templated transcription, initiation
DNQ11_RS10995	COG0386	Belongs to the glutathione peroxidase family
DNQ11_RS11000	COG1305	Transglutaminase-like
DNQ11_RS11005	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
DNQ11_RS11010	COG0714	Associated with various cellular activities
DNQ11_RS11025	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DNQ11_RS11030	COG1140	nitrate reductase beta subunit
DNQ11_RS11035	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DNQ11_RS11040	COG2181	nitrate reductase activity
DNQ11_RS11060	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DNQ11_RS11065	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DNQ11_RS11070	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DNQ11_RS11075	COG0303	'Molybdopterin
DNQ11_RS11080	COG0314	molybdopterin synthase activity
DNQ11_RS11090	COG2223	nitrite transmembrane transporter activity
DNQ11_RS11110	COG1648	precorrin-2 dehydrogenase activity
DNQ11_RS11120	COG1587	Uroporphyrinogen-III synthase
DNQ11_RS11120	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DNQ11_RS11125	COG2146	nitrite reductase [NAD(P)H] activity
DNQ11_RS11130	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DNQ11_RS11135	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
DNQ11_RS11170	COG2359	stage V sporulation protein S
DNQ11_RS11190	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNQ11_RS11205	COG1418	mRNA catabolic process
DNQ11_RS11210	COG0488	(ABC) transporter
DNQ11_RS11225	COG0629	single-stranded DNA binding
DNQ11_RS11240	COG1413	lyase activity
DNQ11_RS11255	COG2136	Putative SAM-dependent methyltransferase
DNQ11_RS11255	COG2521	methyltransferase
DNQ11_RS11260	COG0018	arginyl-trna synthetase
DNQ11_RS11285	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DNQ11_RS11305	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DNQ11_RS11310	COG0017	Asparaginyl-tRNA synthetase
DNQ11_RS11330	COG1674	ftsk spoiiie
DNQ11_RS11425	COG1929	Belongs to the glycerate kinase type-1 family
DNQ11_RS11430	COG0471	metal ion transport
DNQ11_RS11435	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS11440	COG3850	Histidine kinase
DNQ11_RS11440	COG5002	protein histidine kinase activity
DNQ11_RS11455	COG0733	neurotransmitter:sodium symporter activity
DNQ11_RS11480	COG2610	gluconate transmembrane transporter activity
DNQ11_RS11485	COG1454	alcohol dehydrogenase
DNQ11_RS11490	COG1794	racemase activity, acting on amino acids and derivatives
DNQ11_RS11500	COG0456	acetyltransferase
DNQ11_RS11515	COG1131	(ABC) transporter
DNQ11_RS11530	COG0546	phosphoglycolate phosphatase activity
DNQ11_RS11550	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNQ11_RS11565	COG0768	penicillin binding
DNQ11_RS11570	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DNQ11_RS11575	COG0204	Acyl-transferase
DNQ11_RS11580	COG1272	protein, Hemolysin III
DNQ11_RS11590	COG0805	protein transport
DNQ11_RS11605	COG1307	EDD domain protein, DegV family
DNQ11_RS11610	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DNQ11_RS11615	COG1999	signal sequence binding
DNQ11_RS11620	COG0071	Belongs to the small heat shock protein (HSP20) family
DNQ11_RS11625	COG0367	asparagine synthase
DNQ11_RS11645	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_RS11650	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DNQ11_RS11675	COG1051	belongs to the nudix hydrolase family
DNQ11_RS11685	COG0668	transmembrane transport
DNQ11_RS11690	COG2203	Gaf domain
DNQ11_RS11690	COG4585	Histidine kinase
DNQ11_RS11695	COG2197	response regulator
DNQ11_RS11705	COG1064	alcohol dehydrogenase
DNQ11_RS11730	COG1070	Carbohydrate kinase
DNQ11_RS11735	COG1070	Carbohydrate kinase
DNQ11_RS11765	COG0517	IMP dehydrogenase activity
DNQ11_RS11765	COG1125	glycine betaine transport
DNQ11_RS11770	COG1174	glycine betaine transport
DNQ11_RS11805	COG1253	flavin adenine dinucleotide binding
DNQ11_RS11810	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_RS11815	COG5506	Protein of unknown function (DUF1694)
DNQ11_RS11835	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DNQ11_RS11840	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DNQ11_RS11845	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DNQ11_RS11850	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DNQ11_RS11855	COG0456	acetyltransferase
DNQ11_RS11860	COG3829	transcription factor binding
DNQ11_RS11870	COG1509	lysine 2,3-aminomutase activity
DNQ11_RS11910	COG4326	sporulation control protein
DNQ11_RS11915	COG0671	phosphoesterase, PA-phosphatase related
DNQ11_RS11920	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DNQ11_RS11925	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNQ11_RS11955	COG1715	Restriction endonuclease
DNQ11_RS11955	COG1787	Restriction endonuclease
DNQ11_RS12070	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DNQ11_RS12110	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNQ11_RS12110	COG4499	WXG100 protein secretion system (Wss), protein YukC
DNQ11_RS12115	COG2814	Major facilitator Superfamily
DNQ11_RS12120	COG4841	protein insertion into membrane
DNQ11_RS12125	COG0372	Belongs to the citrate synthase family
DNQ11_RS12130	COG2079	MmgE PrpD family protein
DNQ11_RS12135	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
DNQ11_RS12140	COG1960	acyl-CoA dehydrogenase activity
DNQ11_RS12145	COG2084	Dehydrogenase
DNQ11_RS12155	COG1280	lysine exporter protein (LysE YggA)
DNQ11_RS12160	COG1024	Enoyl-CoA hydratase
DNQ11_RS12175	COG0420	3'-5' exonuclease activity
DNQ11_RS12180	COG0419	ATPase involved in DNA repair
DNQ11_RS12215	COG2223	nitrite transmembrane transporter activity
DNQ11_RS12225	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS12230	COG1169	isochorismate synthase
DNQ11_RS12235	COG1021	2,3-dihydroxybenzoate-AMP ligase
DNQ11_RS12240	COG3433	isochorismatase activity
DNQ11_RS12240	COG1535	isochorismatase
DNQ11_RS12245	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DNQ11_RS12250	COG3251	PFAM MbtH domain protein
DNQ11_RS12255	COG2814	Major facilitator Superfamily
DNQ11_RS12270	COG0776	regulation of translation
DNQ11_RS12280	COG2318	DinB family
DNQ11_RS12290	COG1115	amino acid carrier protein
DNQ11_RS12305	COG2329	Antibiotic biosynthesis monooxygenase
DNQ11_RS12310	COG1187	pseudouridine synthase activity
DNQ11_RS12315	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DNQ11_RS12335	COG0596	Alpha beta hydrolase
DNQ11_RS12340	COG2814	Major facilitator Superfamily
DNQ11_RS12360	COG2226	methyltransferase
DNQ11_RS12405	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_RS12440	COG1247	-acetyltransferase
DNQ11_RS12470	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
DNQ11_RS12480	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_RS12490	COG1278	Cold shock
DNQ11_RS12505	COG0010	Belongs to the arginase family
DNQ11_RS12510	COG0561	phosphatase activity
DNQ11_RS12560	COG0583	DNA-binding transcription factor activity
DNQ11_RS12565	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DNQ11_RS12580	COG0583	DNA-binding transcription factor activity
DNQ11_RS12585	COG2258	MOSC domain
DNQ11_RS12600	COG1132	(ABC) transporter
DNQ11_RS12605	COG1132	(ABC) transporter
DNQ11_RS12625	COG1396	sequence-specific DNA binding
DNQ11_RS12650	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
DNQ11_RS12655	COG1595	DNA-templated transcription, initiation
DNQ11_RS12685	COG1649	PFAM Uncharacterised BCR, COG1649
DNQ11_RS12715	COG2971	BadF BadG BcrA BcrD
DNQ11_RS12720	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DNQ11_RS12725	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DNQ11_RS12755	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_RS12785	COG1309	transcriptional regulator
DNQ11_RS12800	COG0577	efflux transmembrane transporter activity
DNQ11_RS12800	COG1136	(ABC) transporter
DNQ11_RS12805	COG0500	methyltransferase
DNQ11_RS12805	COG3615	Tellurite resistance protein tehB
DNQ11_RS12815	COG2226	methyltransferase
DNQ11_RS12820	COG3961	Belongs to the TPP enzyme family
DNQ11_RS12825	COG1846	Transcriptional regulator
DNQ11_RS12875	COG2195	Cleaves the N-terminal amino acid of tripeptides
DNQ11_RS12895	COG1595	DNA-templated transcription, initiation
DNQ11_RS12905	COG0768	penicillin binding
DNQ11_RS12915	COG2367	Beta-lactamase
DNQ11_RS12920	COG0671	phosphoesterase, PA-phosphatase related
DNQ11_RS12925	COG1609	Transcriptional regulator
DNQ11_RS12930	COG2814	Major facilitator Superfamily
DNQ11_RS12935	COG0673	inositol 2-dehydrogenase activity
DNQ11_RS12945	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_RS12960	COG0191	fructose-bisphosphate aldolase activity
DNQ11_RS12965	COG3718	enzyme involved in inositol metabolism
DNQ11_RS12990	COG0457	Tetratricopeptide repeat
DNQ11_RS12995	COG1476	TRANSCRIPTIONal
DNQ11_RS13010	COG1876	peptidase activity
DNQ11_RS13030	COG1309	transcriptional regulator
DNQ11_RS13035	COG0488	(ABC) transporter
DNQ11_RS13050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_RS13065	COG1252	NADH dehydrogenase
DNQ11_RS13070	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_RS13085	COG1131	(ABC) transporter
DNQ11_RS13095	COG1309	transcriptional regulator
DNQ11_RS13115	COG1960	acyl-CoA dehydrogenase activity
DNQ11_RS13120	COG0439	Biotin carboxylase
DNQ11_RS13125	COG0511	ligase activity, forming carbon-carbon bonds
DNQ11_RS13130	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DNQ11_RS13135	COG1024	Enoyl-CoA hydratase
DNQ11_RS13140	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DNQ11_RS13145	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DNQ11_RS13155	COG1247	-acetyltransferase
DNQ11_RS13160	COG0572	uridine kinase
DNQ11_RS13170	COG2318	DinB family
DNQ11_RS13175	COG1686	Belongs to the peptidase S11 family
DNQ11_RS13200	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DNQ11_RS13240	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DNQ11_RS13240	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DNQ11_RS13265	COG2814	Major facilitator Superfamily
DNQ11_RS13285	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DNQ11_RS13305	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_RS13320	COG1063	alcohol dehydrogenase
DNQ11_RS13350	COG3773	Cell wall hydrolase
DNQ11_RS13365	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS13380	COG0488	(ABC) transporter
DNQ11_RS13395	COG1136	(ABC) transporter
DNQ11_RS13420	COG0460	homoserine dehydrogenase
DNQ11_RS13425	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_RS13435	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DNQ11_RS13530	COG2124	cytochrome p450
DNQ11_RS13565	COG0561	phosphatase activity
DNQ11_RS13575	COG5002	protein histidine kinase activity
DNQ11_RS13580	COG0768	penicillin binding
DNQ11_RS13585	COG1819	glycosyl
DNQ11_RS13590	COG1794	racemase activity, acting on amino acids and derivatives
DNQ11_RS13600	COG1122	ATPase activity
DNQ11_RS13615	COG2205	protein histidine kinase activity
DNQ11_RS13625	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DNQ11_RS13630	COG0604	alcohol dehydrogenase
DNQ11_RS13635	COG0768	penicillin binding
DNQ11_RS13645	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNQ11_RS13680	COG0693	protein deglycase activity
DNQ11_RS13720	COG2814	Major facilitator Superfamily
DNQ11_RS13740	COG0584	glycerophosphoryl diester phosphodiesterase
DNQ11_RS13760	COG0697	spore germination
DNQ11_RS13790	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNQ11_RS13800	COG2223	nitrite transmembrane transporter activity
DNQ11_RS13815	COG2816	NAD+ diphosphatase activity
DNQ11_RS13820	COG0592	DNA-directed DNA polymerase activity
DNQ11_RS13825	COG1051	belongs to the nudix hydrolase family
DNQ11_RS13860	COG3878	Protein conserved in bacteria
DNQ11_RS13915	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DNQ11_RS13930	COG0322	excinuclease ABC activity
DNQ11_RS13975	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DNQ11_RS14000	COG1011	Hydrolase
DNQ11_RS14020	COG0076	glutamate decarboxylase activity
DNQ11_RS14035	COG1523	belongs to the glycosyl hydrolase 13 family
DNQ11_RS14040	COG3227	Zinc metalloprotease (Elastase)
DNQ11_RS14060	COG0201	protein transport
DNQ11_RS14070	COG0697	spore germination
DNQ11_RS14075	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_RS14105	COG4129	membrane
DNQ11_RS14110	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_RS14125	COG2959	enzyme of heme biosynthesis
DNQ11_RS14145	COG3483	tryptophan 2,3-dioxygenase activity
DNQ11_RS14150	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
DNQ11_RS14155	COG3844	kynureninase activity
DNQ11_RS14160	COG1309	transcriptional regulator
DNQ11_RS14195	COG3284	Transcriptional regulator
DNQ11_RS14215	COG1349	DNA-binding transcription factor activity
DNQ11_RS14235	COG1959	2 iron, 2 sulfur cluster binding
DNQ11_RS14255	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DNQ11_RS14260	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNQ11_RS14265	COG0022	dehydrogenase e1 component
DNQ11_RS14270	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DNQ11_RS14280	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS14285	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DNQ11_RS14285	COG0456	acetyltransferase
DNQ11_RS14320	COG4176	ABC-type proline glycine betaine transport system permease component
DNQ11_RS14325	COG4175	Glycine betaine
DNQ11_RS14325	COG0517	IMP dehydrogenase activity
DNQ11_RS14350	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DNQ11_RS14355	COG2153	protein acetylation
DNQ11_RS14360	COG3397	chitin binding
DNQ11_RS14375	COG2205	protein histidine kinase activity
DNQ11_RS14405	COG2333	competence protein COMEC
DNQ11_RS14405	COG0658	competence protein
DNQ11_RS14455	COG3973	AAA domain
DNQ11_RS14470	COG2105	PFAM AIG2 family protein
DNQ11_RS14475	COG0514	ATP-dependent DNA helicase (RecQ)
DNQ11_RS14505	COG4637	Psort location Cytoplasmic, score
DNQ11_RS14530	COG3397	chitin binding
DNQ11_RS14545	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DNQ11_RS14550	COG1115	amino acid carrier protein
DNQ11_RS14555	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_RS14560	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DNQ11_RS14570	COG3938	Belongs to the proline racemase family
DNQ11_RS14575	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DNQ11_RS14615	COG0586	Pfam SNARE associated Golgi protein
DNQ11_RS14630	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DNQ11_RS14635	COG0519	Catalyzes the synthesis of GMP from XMP
DNQ11_RS14640	COG4166	transmembrane transport
DNQ11_RS14650	COG4948	Mandelate Racemase Muconate Lactonizing
DNQ11_RS14705	COG2936	dipeptidyl-peptidase activity
DNQ11_RS14710	COG5002	protein histidine kinase activity
DNQ11_RS14750	COG1164	Oligoendopeptidase f
DNQ11_RS14765	COG1307	EDD domain protein, DegV family
DNQ11_RS14790	COG2814	Major facilitator Superfamily
DNQ11_RS14800	COG1664	Polymer-forming cytoskeletal
DNQ11_RS14805	COG0789	Transcriptional regulator
DNQ11_RS14810	COG4533	DNA binding
DNQ11_RS14815	COG2814	Major facilitator Superfamily
DNQ11_RS14815	COG0477	Major facilitator Superfamily
DNQ11_RS14835	COG2261	transglycosylase associated protein
DNQ11_RS14850	COG2226	methyltransferase
DNQ11_RS14890	COG0436	Aminotransferase
DNQ11_RS14895	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DNQ11_RS14900	COG5146	pantothenate kinase activity
DNQ11_RS14920	COG1131	(ABC) transporter
DNQ11_RS14970	COG0628	permease
DNQ11_RS14985	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DNQ11_RS14990	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DNQ11_RS14995	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DNQ11_RS15000	COG1116	anion transmembrane transporter activity
DNQ11_RS15020	COG2816	NAD+ diphosphatase activity
DNQ11_RS15040	COG2746	aminoglycoside 3-N-acetyltransferase activity
DNQ11_RS15070	COG0697	spore germination
DNQ11_RS15075	COG2318	DinB family
DNQ11_RS15095	COG4912	Dna alkylation repair
DNQ11_RS15120	COG0861	Integral membrane protein TerC family
DNQ11_RS15125	COG1368	sulfuric ester hydrolase activity
DNQ11_RS15135	COG0488	(ABC) transporter
DNQ11_RS15145	COG2409	Drug exporters of the RND superfamily
DNQ11_RS15145	COG1033	growth of symbiont in host cell
DNQ11_RS15150	COG1033	growth of symbiont in host cell
DNQ11_RS15150	COG2409	Drug exporters of the RND superfamily
DNQ11_RS15155	COG1033	growth of symbiont in host cell
DNQ11_RS15155	COG2409	Drug exporters of the RND superfamily
DNQ11_RS15160	COG1309	transcriptional regulator
DNQ11_RS15175	COG0287	Prephenate dehydrogenase
DNQ11_RS15180	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DNQ11_RS15185	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DNQ11_RS15195	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DNQ11_RS15195	COG1605	Chorismate mutase
DNQ11_RS15240	COG3584	3D domain protein
DNQ11_RS15240	COG1388	LysM domain
DNQ11_RS15255	COG1595	DNA-templated transcription, initiation
DNQ11_RS15280	COG1879	ABC-type sugar transport system periplasmic component
DNQ11_RS15290	COG1172	Belongs to the binding-protein-dependent transport system permease family
DNQ11_RS15300	COG2390	Transcriptional regulator
DNQ11_RS15335	COG2329	Antibiotic biosynthesis monooxygenase
DNQ11_RS15355	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_RS15365	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DNQ11_RS15375	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNQ11_RS15380	COG4187	Peptidase family M20/M25/M40
DNQ11_RS15385	COG1414	Transcriptional regulator
DNQ11_RS15395	COG0833	amino acid
DNQ11_RS15400	COG1690	Belongs to the RtcB family
DNQ11_RS15405	COG3239	Fatty acid desaturase
DNQ11_RS15410	COG1785	Belongs to the alkaline phosphatase family
DNQ11_RS15420	COG3655	Transcriptional regulator
DNQ11_RS15435	COG4377	Putative membrane peptidase family (DUF2324)
DNQ11_RS15445	COG3279	Response regulator of the LytR AlgR family
DNQ11_RS15455	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_RS15460	COG0346	lactoylglutathione lyase activity
DNQ11_RS15480	COG0714	Associated with various cellular activities
DNQ11_RS15505	COG0463	Glycosyl transferase, family 2
DNQ11_RS15530	COG0463	Glycosyl transferase, family 2
DNQ11_RS15540	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DNQ11_RS15545	COG0753	catalase activity
DNQ11_RS15580	COG0714	Associated with various cellular activities
DNQ11_RS15590	COG0778	Nitroreductase
DNQ11_RS15595	COG1846	Transcriptional regulator
DNQ11_RS15635	COG1725	Transcriptional regulator
DNQ11_RS15650	COG0577	efflux transmembrane transporter activity
DNQ11_RS15650	COG1136	(ABC) transporter
DNQ11_RS15675	COG2207	Transcriptional regulator
DNQ11_RS15680	COG0456	acetyltransferase
DNQ11_RS15700	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_RS15720	COG0642	Histidine kinase
DNQ11_RS15725	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS15730	COG0596	Alpha beta hydrolase
DNQ11_RS15760	COG0730	response to heat
DNQ11_RS15770	COG0833	amino acid
DNQ11_RS15780	COG4335	DNA alkylation repair
DNQ11_RS15820	COG0768	penicillin binding
DNQ11_RS15830	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DNQ11_RS15870	COG1984	allophanate hydrolase subunit 2
DNQ11_RS15875	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DNQ11_RS15880	COG1414	Transcriptional regulator
DNQ11_RS15895	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNQ11_RS15900	COG0640	Transcriptional regulator
DNQ11_RS15910	COG1960	acyl-CoA dehydrogenase activity
DNQ11_RS15930	COG3314	Sporulation integral membrane protein YlbJ
DNQ11_RS15945	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
DNQ11_RS15960	COG3848	Pyruvate phosphate dikinase
DNQ11_RS15960	COG0574	Belongs to the PEP-utilizing enzyme family
DNQ11_RS15970	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_RS15985	COG5577	PFAM Coat F domain
DNQ11_RS15995	COG3403	YqcI/YcgG family
DNQ11_RS16000	COG1280	lysine exporter protein (LysE YggA)
DNQ11_RS16035	COG1063	alcohol dehydrogenase
DNQ11_RS16050	COG1027	Aspartate ammonia-lyase
DNQ11_RS16055	COG0252	asparaginase activity
DNQ11_RS16060	COG1396	sequence-specific DNA binding
DNQ11_RS16070	COG0322	excinuclease ABC activity
DNQ11_RS16075	COG0531	amino acid
DNQ11_RS16080	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_RS16085	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNQ11_RS16095	COG0281	malic enzyme
DNQ11_RS16110	COG0531	amino acid
DNQ11_RS16115	COG0697	spore germination
DNQ11_RS16125	COG0784	Response regulator, receiver
DNQ11_RS16135	COG2066	Belongs to the glutaminase family
DNQ11_RS16140	COG1115	amino acid carrier protein
DNQ11_RS16175	COG0753	catalase activity
DNQ11_RS16180	COG2267	carboxylic ester hydrolase activity
DNQ11_RS16185	COG1335	isochorismatase
DNQ11_RS16205	COG0583	DNA-binding transcription factor activity
DNQ11_RS16215	COG1846	Transcriptional regulator
DNQ11_RS16260	COG0415	Belongs to the DNA photolyase family
DNQ11_RS16265	COG0288	reversible hydration of carbon dioxide
DNQ11_RS16275	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DNQ11_RS16280	COG5609	conserved protein (DUF2294)
DNQ11_RS16300	COG1575	Belongs to the MenA family. Type 1 subfamily
DNQ11_RS16305	COG2267	carboxylic ester hydrolase activity
DNQ11_RS16315	COG0803	Belongs to the bacterial solute-binding protein 9 family
DNQ11_RS16320	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DNQ11_RS16325	COG1121	(ABC) transporter
DNQ11_RS16355	COG0798	PFAM Bile acid sodium symporter
DNQ11_RS16360	COG0346	lactoylglutathione lyase activity
DNQ11_RS16365	COG0640	Transcriptional regulator
DNQ11_RS16380	COG0443	Heat shock 70 kDa protein
DNQ11_RS16400	COG1522	sequence-specific DNA binding
DNQ11_RS16415	COG0346	lactoylglutathione lyase activity
DNQ11_RS16440	COG2169	Transcriptional regulator
DNQ11_RS16490	COG2814	Major facilitator Superfamily
DNQ11_RS16520	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS16525	COG5002	protein histidine kinase activity
DNQ11_RS16525	COG3850	Histidine kinase
DNQ11_RS16560	COG2515	1-aminocyclopropane-1-carboxylate deaminase
DNQ11_RS16590	COG1476	TRANSCRIPTIONal
DNQ11_RS16605	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_RS16610	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DNQ11_RS16620	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_RS16625	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
DNQ11_RS16640	COG1136	(ABC) transporter
DNQ11_RS16645	COG0577	efflux transmembrane transporter activity
DNQ11_RS16660	COG5002	protein histidine kinase activity
DNQ11_RS16660	COG3850	Histidine kinase
DNQ11_RS16670	COG2364	Membrane
DNQ11_RS16675	COG1846	Transcriptional regulator
DNQ11_RS16685	COG2808	Putative FMN-binding domain
DNQ11_RS16690	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS16695	COG2271	Major facilitator Superfamily
DNQ11_RS16700	COG1556	Lactate utilization protein
DNQ11_RS16705	COG1139	Iron-sulfur cluster binding protein
DNQ11_RS16715	COG0583	DNA-binding transcription factor activity
DNQ11_RS16725	COG1619	proteins homologs of microcin C7 resistance protein MccF
DNQ11_RS16755	COG0738	Major facilitator superfamily
DNQ11_RS16760	COG0673	inositol 2-dehydrogenase activity
DNQ11_RS16765	COG0561	phosphatase activity
DNQ11_RS16775	COG1609	Transcriptional regulator
DNQ11_RS16780	COG0457	Tetratricopeptide repeat
DNQ11_RS16800	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DNQ11_RS16830	COG0534	Mate efflux family protein
DNQ11_RS16850	COG2184	nucleotidyltransferase activity
DNQ11_RS16855	COG2814	Major facilitator Superfamily
DNQ11_RS16860	COG1309	transcriptional regulator
DNQ11_RS16875	COG0814	amino acid
DNQ11_RS16880	COG1760	l-serine dehydratase
DNQ11_RS16885	COG1760	l-serine dehydratase
DNQ11_RS16900	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DNQ11_RS16905	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
DNQ11_RS16915	COG1335	isochorismatase
DNQ11_RS16920	COG1522	sequence-specific DNA binding
DNQ11_RS16925	COG0531	amino acid
DNQ11_RS16945	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DNQ11_RS16965	COG1595	DNA-templated transcription, initiation
DNQ11_RS16980	COG0662	Cupin 2, conserved barrel domain protein
DNQ11_RS16990	COG2207	Transcriptional regulator
DNQ11_RS16990	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_RS17045	COG0477	Major facilitator Superfamily
DNQ11_RS17055	COG1846	Transcriptional regulator
DNQ11_RS17060	COG2814	Major facilitator Superfamily
DNQ11_RS17075	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DNQ11_RS17100	COG2076	Multidrug Resistance protein
DNQ11_RS17105	COG1309	transcriptional regulator
DNQ11_RS17115	COG2031	fatty acid transporter
DNQ11_RS17125	COG2249	NAD(P)H dehydrogenase (quinone) activity
DNQ11_RS17155	COG1122	ATPase activity
DNQ11_RS17160	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DNQ11_RS17175	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DNQ11_RS17180	COG1288	antiporter activity
DNQ11_RS17185	COG2356	endonuclease I
DNQ11_RS17200	COG3620	sequence-specific DNA binding
DNQ11_RS17205	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DNQ11_RS17210	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DNQ11_RS17215	COG0124	histidyl-tRNA synthetase
DNQ11_RS17230	COG1733	regulation of RNA biosynthetic process
DNQ11_RS17235	COG0778	Nitroreductase
DNQ11_RS17260	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS17270	COG1131	(ABC) transporter
DNQ11_RS17295	COG1011	Hydrolase
DNQ11_RS17305	COG2365	Tyrosine phosphatase family
DNQ11_RS17330	COG0346	lactoylglutathione lyase activity
DNQ11_RS17335	COG1940	carbohydrate kinase activity
DNQ11_RS17340	COG0738	Major facilitator superfamily
DNQ11_RS17345	COG0110	maltose O-acetyltransferase activity
DNQ11_RS17355	COG0577	efflux transmembrane transporter activity
DNQ11_RS17355	COG1136	(ABC) transporter
DNQ11_RS17370	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DNQ11_RS17375	COG0628	permease
DNQ11_RS17395	COG2226	methyltransferase
DNQ11_RS17405	COG0477	Major facilitator Superfamily
DNQ11_RS17435	COG1253	flavin adenine dinucleotide binding
DNQ11_RS17440	COG0789	Transcriptional regulator
DNQ11_RS17445	COG0697	spore germination
DNQ11_RS17450	COG1357	PFAM Pentapeptide repeats (8 copies)
DNQ11_RS17455	COG3813	Protein conserved in bacteria
DNQ11_RS17465	COG2706	6-phosphogluconolactonase activity
DNQ11_RS17470	COG1070	Carbohydrate kinase
DNQ11_RS17480	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DNQ11_RS17485	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DNQ11_RS17495	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DNQ11_RS17500	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DNQ11_RS17505	COG0604	alcohol dehydrogenase
DNQ11_RS17510	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DNQ11_RS17530	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS17555	COG0656	L-ascorbic acid biosynthetic process
DNQ11_RS17560	COG2814	Major facilitator Superfamily
DNQ11_RS17580	COG0346	lactoylglutathione lyase activity
DNQ11_RS17585	COG0814	amino acid
DNQ11_RS17610	COG1393	Belongs to the ArsC family
DNQ11_RS17620	COG1733	regulation of RNA biosynthetic process
DNQ11_RS17625	COG2188	Transcriptional regulator
DNQ11_RS17635	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DNQ11_RS17640	COG1733	regulation of RNA biosynthetic process
DNQ11_RS17645	COG1733	regulation of RNA biosynthetic process
DNQ11_RS17660	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_RS17680	COG0384	phenazine biosynthesis protein PhzF
DNQ11_RS17690	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS17700	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_RS17710	COG1733	regulation of RNA biosynthetic process
DNQ11_RS17745	COG1191	sigma factor activity
DNQ11_RS17760	COG1309	transcriptional regulator
DNQ11_RS17780	COG3152	Membrane
DNQ11_RS17810	COG1151	hydroxylamine reductase activity
DNQ11_RS17825	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_RS17830	COG3757	hydrolase, family 25
DNQ11_RS17830	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_RS17865	COG2072	flavoprotein involved in K transport
DNQ11_RS17900	COG0604	alcohol dehydrogenase
DNQ11_RS17905	COG1113	amino acid transport
DNQ11_RS17910	COG2814	Major facilitator Superfamily
DNQ11_RS17945	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DNQ11_RS17950	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DNQ11_RS17980	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_RS17985	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_RS17990	COG3739	integral membrane protein
DNQ11_RS17995	COG0384	phenazine biosynthesis protein PhzF
DNQ11_RS18025	COG0583	DNA-binding transcription factor activity
DNQ11_RS18045	COG1193	negative regulation of DNA recombination
DNQ11_RS18070	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNQ11_RS18100	COG0584	glycerophosphoryl diester phosphodiesterase
DNQ11_RS18125	COG0640	Transcriptional regulator
DNQ11_RS18130	COG0604	alcohol dehydrogenase
DNQ11_RS18150	COG2808	Putative FMN-binding domain
DNQ11_RS18155	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DNQ11_RS18165	COG0385	Bile acid
DNQ11_RS18170	COG0277	FAD linked oxidase domain protein
DNQ11_RS18215	COG1024	Enoyl-CoA hydratase
DNQ11_RS18225	COG1285	pathogenesis
DNQ11_RS18240	COG2514	catechol 2,3-dioxygenase activity
DNQ11_RS18245	COG2720	vancomycin resistance protein
DNQ11_RS18285	COG0716	FMN binding
DNQ11_RS18315	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS18325	COG0165	Argininosuccinate lyase
DNQ11_RS18340	COG4145	pantothenate transmembrane transporter activity
DNQ11_RS18350	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_RS18355	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS18365	COG1657	PFAM Prenyltransferase squalene oxidase
DNQ11_RS18370	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
DNQ11_RS18375	COG2962	Rard protein
DNQ11_RS18380	COG3326	Membrane
DNQ11_RS18395	COG0489	protein tyrosine kinase activity
DNQ11_RS18405	COG0314	molybdopterin synthase activity
DNQ11_RS18410	COG0303	'Molybdopterin
DNQ11_RS18415	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DNQ11_RS18420	COG2116	formate transmembrane transporter activity
DNQ11_RS18435	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DNQ11_RS18440	COG5609	conserved protein (DUF2294)
DNQ11_RS18445	COG2427	Protein of unknown function (DUF1641)
DNQ11_RS18450	COG3383	formate dehydrogenase (NAD+) activity
DNQ11_RS18460	COG0697	spore germination
DNQ11_RS18500	COG2226	methyltransferase
DNQ11_RS18505	COG4166	transmembrane transport
DNQ11_RS18510	COG4166	transmembrane transport
DNQ11_RS18515	COG4166	transmembrane transport
DNQ11_RS18520	COG1301	dicarboxylic acid transport
DNQ11_RS18525	COG1316	TRANSCRIPTIONal
DNQ11_RS18535	COG1595	DNA-templated transcription, initiation
DNQ11_RS18555	COG1131	(ABC) transporter
DNQ11_RS18565	COG0673	inositol 2-dehydrogenase activity
DNQ11_RS18570	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNQ11_RS18575	COG0187	DNA topoisomerase II activity
DNQ11_RS18585	COG1832	CoA-binding protein
DNQ11_RS18590	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DNQ11_RS18595	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS18610	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DNQ11_RS18615	COG4841	protein insertion into membrane
DNQ11_RS18620	COG0824	Thioesterase
DNQ11_RS18655	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNQ11_RS18665	COG2274	protein secretion by the type I secretion system
DNQ11_RS18670	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DNQ11_RS18710	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DNQ11_RS18725	COG0183	Belongs to the thiolase family
DNQ11_RS18730	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_RS18735	COG1268	BioY protein
DNQ11_RS18740	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_RS18795	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS18810	COG5002	protein histidine kinase activity
DNQ11_RS18815	COG0400	carboxylic ester hydrolase activity
DNQ11_RS18820	COG0346	lactoylglutathione lyase activity
DNQ11_RS18825	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNQ11_RS18830	COG0069	glutamate synthase activity
DNQ11_RS18835	COG1902	pentaerythritol trinitrate reductase activity
DNQ11_RS18840	COG1329	Transcriptional regulator
DNQ11_RS18845	COG0010	Belongs to the arginase family
DNQ11_RS18870	COG2226	methyltransferase
DNQ11_RS18930	COG4846	Membrane protein involved in cytochrome C biogenesis
DNQ11_RS18935	COG0785	Cytochrome C biogenesis protein
DNQ11_RS18950	COG0583	DNA-binding transcription factor activity
DNQ11_RS18955	COG1380	Effector of murein hydrolase LrgA
DNQ11_RS18960	COG1346	cytolysis
DNQ11_RS18985	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_RS18985	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNQ11_RS19000	COG1132	(ABC) transporter
DNQ11_RS19005	COG1132	(ABC) transporter
DNQ11_RS19045	COG3639	organic phosphonate transmembrane transporter activity
DNQ11_RS19050	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DNQ11_RS19070	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DNQ11_RS19090	COG1695	Transcriptional regulator
DNQ11_RS19135	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_RS19135	COG1388	LysM domain
DNQ11_RS19135	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNQ11_RS19140	COG4824	toxin secretion phage lysis holin
DNQ11_RS19300	COG1595	DNA-templated transcription, initiation
DNQ11_RS19345	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
DNQ11_RS19435	COG1396	sequence-specific DNA binding
DNQ11_RS19460	COG0174	glutamine synthetase
DNQ11_RS19465	COG0789	Transcriptional regulator
DNQ11_RS19470	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
DNQ11_RS19480	COG2860	membrane
DNQ11_RS19490	COG0464	growth
DNQ11_RS19520	COG1388	LysM domain
DNQ11_RS19520	COG3584	3D domain protein
DNQ11_RS19530	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DNQ11_RS19530	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNQ11_RS19530	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DNQ11_RS19535	COG1105	Belongs to the carbohydrate kinase PfkB family
DNQ11_RS19540	COG1349	DNA-binding transcription factor activity
DNQ11_RS19550	COG2322	membrane
DNQ11_RS19585	COG1408	metallophosphoesterase
DNQ11_RS19590	COG2116	formate transmembrane transporter activity
DNQ11_RS19605	COG2217	Heavy metal translocating P-type atpase
DNQ11_RS19610	COG2608	mercury ion transmembrane transporter activity
DNQ11_RS19615	COG1937	Protein conserved in bacteria
DNQ11_RS19625	COG2819	hydrolase of the alpha beta superfamily
DNQ11_RS19630	COG1120	ATPase activity
DNQ11_RS19635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_RS19640	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_RS19650	COG0708	Exodeoxyribonuclease III
DNQ11_RS19655	COG2169	Transcriptional regulator
DNQ11_RS19660	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DNQ11_RS19665	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DNQ11_RS19675	COG2364	Membrane
DNQ11_RS19690	COG2267	carboxylic ester hydrolase activity
DNQ11_RS19695	COG0346	lactoylglutathione lyase activity
DNQ11_RS19700	COG5001	Diguanylate cyclase
DNQ11_RS19700	COG3300	MHYT domain
DNQ11_RS19720	COG1346	cytolysis
DNQ11_RS19725	COG1380	Effector of murein hydrolase LrgA
DNQ11_RS19730	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_RS19735	COG0596	Alpha beta hydrolase
DNQ11_RS19735	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNQ11_RS19740	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DNQ11_RS19760	COG1404	Belongs to the peptidase S8 family
DNQ11_RS19765	COG3773	Cell wall hydrolase
DNQ11_RS19770	COG0562	UDP-galactopyranose mutase
DNQ11_RS19775	COG1368	sulfuric ester hydrolase activity
DNQ11_RS19790	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
DNQ11_RS19815	COG1131	(ABC) transporter
DNQ11_RS19835	COG4550	Control of competence regulator ComK, YlbF/YmcA
DNQ11_RS19840	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DNQ11_RS19845	COG1013	pyruvate-flavodoxin oxidoreductase activity
DNQ11_RS19850	COG0674	pyruvate-flavodoxin oxidoreductase activity
DNQ11_RS19850	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DNQ11_RS19860	COG2359	stage V sporulation protein S
DNQ11_RS19865	COG1692	metallophosphoesterase
DNQ11_RS19890	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DNQ11_RS19895	COG1426	Protein conserved in bacteria
DNQ11_RS19910	COG0300	oxidoreductase activity
DNQ11_RS19915	COG0612	Peptidase, M16
DNQ11_RS19920	COG0612	Peptidase, M16
DNQ11_RS19925	COG1079	Belongs to the binding-protein-dependent transport system permease family
DNQ11_RS19935	COG3845	ABC transporter
DNQ11_RS19940	COG1744	ABC transporter substrate-binding protein PnrA-like
DNQ11_RS19945	COG2188	Transcriptional regulator
DNQ11_RS19950	COG1674	ftsk spoiiie
DNQ11_RS19960	COG0740	serine-type endopeptidase activity
DNQ11_RS19965	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNQ11_RS19980	COG0527	aspartate kinase activity
DNQ11_RS19985	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DNQ11_RS19990	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DNQ11_RS19995	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNQ11_RS20005	COG1873	PFAM PRC-barrel domain
DNQ11_RS20010	COG0612	Peptidase, M16
DNQ11_RS20015	COG0726	polysaccharide deacetylase
DNQ11_RS20030	COG0196	riboflavin kinase activity
DNQ11_RS20035	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DNQ11_RS20045	COG1550	Protein conserved in bacteria
DNQ11_RS20055	COG1358	cellular component organization or biogenesis
DNQ11_RS20060	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DNQ11_RS20065	COG0195	Participates in both transcription termination and antitermination
DNQ11_RS20090	COG0750	zinc metalloprotease
DNQ11_RS20100	COG4589	Belongs to the CDS family
DNQ11_RS20105	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DNQ11_RS20115	COG0528	UMP kinase activity
DNQ11_RS20145	COG4974	Belongs to the 'phage' integrase family
DNQ11_RS20155	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DNQ11_RS20165	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DNQ11_RS20205	COG1837	Belongs to the UPF0109 family
DNQ11_RS20215	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DNQ11_RS20225	COG0552	protein localization to endoplasmic reticulum
DNQ11_RS20230	COG1196	nuclear chromosome segregation
DNQ11_RS20240	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DNQ11_RS20245	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS20250	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DNQ11_RS20265	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DNQ11_RS20270	COG1461	Dihydroxyacetone kinase
DNQ11_RS20275	COG1302	Protein conserved in bacteria
DNQ11_RS20290	COG1564	THIamine pyrophosphokinase
DNQ11_RS20295	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DNQ11_RS20300	COG1162	GTPase activity
DNQ11_RS20305	COG2815	serine threonine protein kinase
DNQ11_RS20305	COG0515	serine threonine protein kinase
DNQ11_RS20310	COG0631	protein serine/threonine phosphatase activity
DNQ11_RS20320	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DNQ11_RS20320	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DNQ11_RS20330	COG0242	peptide deformylase activity
DNQ11_RS20335	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DNQ11_RS20340	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DNQ11_RS20360	COG1561	YicC-like family, N-terminal region
DNQ11_RS20365	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DNQ11_RS20375	COG0006	proline dipeptidase activity
DNQ11_RS20395	COG3069	C4-dicarboxylate transmembrane transporter activity
DNQ11_RS20460	COG0564	pseudouridine synthase activity
DNQ11_RS20480	COG3599	regulation of cell shape
DNQ11_RS20485	COG2302	S4 RNA-binding domain
DNQ11_RS20490	COG0762	integral membrane protein
DNQ11_RS20500	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DNQ11_RS20505	COG1496	oxidoreductase activity
DNQ11_RS20510	COG1873	PFAM PRC-barrel domain
DNQ11_RS20515	COG1191	sigma factor activity
DNQ11_RS20520	COG1191	sigma factor activity
DNQ11_RS20530	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DNQ11_RS20535	COG0849	cell division
DNQ11_RS20540	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DNQ11_RS20545	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DNQ11_RS20555	COG0772	Belongs to the SEDS family
DNQ11_RS20570	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DNQ11_RS20575	COG0768	penicillin binding
DNQ11_RS20580	COG0768	penicillin binding
DNQ11_RS20585	COG4839	cell division protein FtsL
DNQ11_RS20600	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNQ11_RS20615	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DNQ11_RS20620	COG1399	metal-binding, possibly nucleic acid-binding protein
DNQ11_RS20670	COG4824	toxin secretion phage lysis holin
DNQ11_RS20760	COG4626	Terminase
DNQ11_RS20760	COG1802	Transcriptional regulator
DNQ11_RS20785	COG0582	viral genome integration into host DNA
DNQ11_RS20860	COG0756	dUTP diphosphatase activity
DNQ11_RS20875	COG1191	sigma factor activity
DNQ11_RS20900	COG1484	DNA-dependent DNA replication
DNQ11_RS20930	COG1396	sequence-specific DNA binding
DNQ11_RS20950	COG1396	sequence-specific DNA binding
DNQ11_RS20970	COG0582	viral genome integration into host DNA
DNQ11_RS20980	COG3480	Lon protease (S16) C-terminal proteolytic domain
DNQ11_RS20985	COG1752	Esterase of the alpha-beta hydrolase superfamily
DNQ11_RS20990	COG3314	Sporulation integral membrane protein YlbJ
DNQ11_RS21000	COG0742	ribosomal rna small subunit methyltransferase
DNQ11_RS21015	COG3679	Belongs to the UPF0342 family
DNQ11_RS21020	COG0406	alpha-ribazole phosphatase activity
DNQ11_RS21035	COG2340	Cysteine-rich secretory protein family
DNQ11_RS21050	COG3336	cytochrome c oxidase
DNQ11_RS21085	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
DNQ11_RS21095	COG0772	Belongs to the SEDS family
DNQ11_RS21105	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DNQ11_RS21110	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DNQ11_RS21120	COG4896	Protein conserved in bacteria
DNQ11_RS21135	COG1217	gtp-binding protein TYPA
DNQ11_RS21145	COG0483	inositol monophosphate 1-phosphatase activity
DNQ11_RS21165	COG1982	Orn Lys Arg decarboxylase major
DNQ11_RS21210	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNQ11_RS21215	COG0022	dehydrogenase e1 component
DNQ11_RS21220	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DNQ11_RS21230	COG0242	peptide deformylase activity
DNQ11_RS21235	COG0561	phosphatase activity
DNQ11_RS21250	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNQ11_RS21255	COG0569	domain protein
DNQ11_RS21275	COG0583	DNA-binding transcription factor activity
DNQ11_RS21280	COG0517	IMP dehydrogenase activity
DNQ11_RS21290	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
DNQ11_RS21300	COG4703	Protein of unknown function (DUF1797)
DNQ11_RS21315	COG2200	EAL domain
DNQ11_RS21320	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS21325	COG1408	metallophosphoesterase
DNQ11_RS21340	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DNQ11_RS21380	COG2814	Major facilitator Superfamily
DNQ11_RS21400	COG3209	COG3209 Rhs family protein
DNQ11_RS21415	COG2205	protein histidine kinase activity
DNQ11_RS21425	COG0436	Aminotransferase
DNQ11_RS21430	COG1609	Transcriptional regulator
DNQ11_RS21435	COG3833	ABC-type maltose transport systems, permease component
DNQ11_RS21440	COG1175	transmembrane transport
DNQ11_RS21445	COG2182	Extracellular solute-binding protein
DNQ11_RS21455	COG0366	Alpha amylase catalytic
DNQ11_RS21460	COG3842	ATPase activity
DNQ11_RS21500	COG0183	Belongs to the thiolase family
DNQ11_RS21540	COG1695	Transcriptional regulator
DNQ11_RS21545	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS21555	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
DNQ11_RS21565	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DNQ11_RS21570	COG0436	Aminotransferase
DNQ11_RS21590	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
DNQ11_RS21615	COG2199	diguanylate cyclase activity
DNQ11_RS21620	COG0778	Nitroreductase
DNQ11_RS21645	COG2190	(PTS) system
DNQ11_RS21645	COG1263	PTS System
DNQ11_RS21645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_RS21650	COG3711	transcriptional antiterminator
DNQ11_RS21660	COG2188	Transcriptional regulator
DNQ11_RS21670	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DNQ11_RS21700	COG1547	Domain of unknown function (DUF309)
DNQ11_RS21705	COG0456	acetyltransferase
DNQ11_RS21715	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DNQ11_RS21720	COG4086	secreted protein
DNQ11_RS21725	COG0561	phosphatase activity
DNQ11_RS21730	COG0697	spore germination
DNQ11_RS21745	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_RS21770	COG0733	neurotransmitter:sodium symporter activity
DNQ11_RS21790	COG1686	Belongs to the peptidase S11 family
DNQ11_RS21800	COG1725	Transcriptional regulator
DNQ11_RS21805	COG1131	(ABC) transporter
DNQ11_RS21825	COG1846	Transcriptional regulator
DNQ11_RS21840	COG0598	Magnesium transport protein CorA
DNQ11_RS21865	COG4974	Belongs to the 'phage' integrase family
DNQ11_RS21875	COG0735	belongs to the Fur family
DNQ11_RS21880	COG1300	Membrane
DNQ11_RS21900	COG0667	Aldo Keto reductase
DNQ11_RS21905	COG0656	L-ascorbic acid biosynthetic process
DNQ11_RS21910	COG0456	acetyltransferase
DNQ11_RS21910	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DNQ11_RS21920	COG0737	Belongs to the 5'-nucleotidase family
DNQ11_RS21920	COG1525	nuclease
DNQ11_RS21920	COG4085	toxin activity
DNQ11_RS21930	COG0596	Alpha beta hydrolase
DNQ11_RS21935	COG2056	Na+-H+ antiporter family
DNQ11_RS21940	COG1609	Transcriptional regulator
DNQ11_RS21945	COG0456	acetyltransferase
DNQ11_RS21950	COG1073	alpha beta
DNQ11_RS21965	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DNQ11_RS21965	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DNQ11_RS21970	COG0307	riboflavin synthase, alpha
DNQ11_RS21995	COG4106	trans-aconitate 2-methyltransferase activity
DNQ11_RS22000	COG2226	methyltransferase
DNQ11_RS22000	COG1073	alpha beta
DNQ11_RS22015	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DNQ11_RS22030	COG1757	Na H antiporter
DNQ11_RS22035	COG0737	Belongs to the 5'-nucleotidase family
DNQ11_RS22045	COG1522	sequence-specific DNA binding
DNQ11_RS22065	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DNQ11_RS22075	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DNQ11_RS22090	COG0300	oxidoreductase activity
DNQ11_RS22100	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNQ11_RS22105	COG1760	l-serine dehydratase
DNQ11_RS22110	COG1760	l-serine dehydratase
DNQ11_RS22135	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DNQ11_RS22145	COG2195	Cleaves the N-terminal amino acid of tripeptides
DNQ11_RS22150	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_RS22165	COG1376	ErfK ybiS ycfS ynhG family protein
DNQ11_RS22170	COG4129	membrane
DNQ11_RS22175	COG1126	abc transporter atp-binding protein
DNQ11_RS22180	COG0765	amino acid transport
DNQ11_RS22185	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DNQ11_RS22205	COG2816	NAD+ diphosphatase activity
DNQ11_RS22210	COG0772	Belongs to the SEDS family
DNQ11_RS22220	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNQ11_RS22225	COG0022	dehydrogenase e1 component
DNQ11_RS22230	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DNQ11_RS22235	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DNQ11_RS22250	COG0280	phosphate acetyltransferase
DNQ11_RS22260	COG3829	transcription factor binding
DNQ11_RS22260	COG3290	protein histidine kinase activity
DNQ11_RS22270	COG0584	glycerophosphoryl diester phosphodiesterase
DNQ11_RS22275	COG3093	addiction module antidote protein HigA
DNQ11_RS22285	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS22295	COG0750	zinc metalloprotease
DNQ11_RS22300	COG0497	DNA recombination
DNQ11_RS22310	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
DNQ11_RS22320	COG0142	geranyltranstransferase activity
DNQ11_RS22345	COG1302	Protein conserved in bacteria
DNQ11_RS22350	COG0439	Biotin carboxylase
DNQ11_RS22355	COG0511	ligase activity, forming carbon-carbon bonds
DNQ11_RS22400	COG3854	ATPases associated with a variety of cellular activities
DNQ11_RS22425	COG0006	proline dipeptidase activity
DNQ11_RS22440	COG3872	metal-dependent enzyme
DNQ11_RS22450	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DNQ11_RS22470	COG0095	Lipoate-protein ligase
DNQ11_RS22475	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_RS22480	COG1609	Transcriptional regulator
DNQ11_RS22490	COG2076	Multidrug Resistance protein
DNQ11_RS22495	COG2076	Multidrug Resistance protein
DNQ11_RS22535	COG1131	(ABC) transporter
DNQ11_RS22540	COG1725	Transcriptional regulator
DNQ11_RS22575	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DNQ11_RS22635	COG4970	Tfp pilus assembly protein FimT
DNQ11_RS22645	COG1459	type II secretion system
DNQ11_RS22650	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DNQ11_RS22700	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DNQ11_RS22705	COG0646	methionine synthase
DNQ11_RS22705	COG1410	methionine synthase
DNQ11_RS22710	COG0646	methionine synthase
DNQ11_RS22710	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DNQ11_RS22715	COG0626	cystathionine gamma-synthase activity
DNQ11_RS22720	COG0626	cystathionine gamma-synthase activity
DNQ11_RS22740	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_RS22750	COG1940	carbohydrate kinase activity
DNQ11_RS22755	COG4483	Protein conserved in bacteria
DNQ11_RS22760	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DNQ11_RS22765	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DNQ11_RS22770	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DNQ11_RS22775	COG0704	Plays a role in the regulation of phosphate uptake
DNQ11_RS22785	COG0581	inorganic phosphate transmembrane transporter activity
DNQ11_RS22790	COG0573	inorganic phosphate transmembrane transporter activity
DNQ11_RS22795	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DNQ11_RS22800	COG0768	penicillin binding
DNQ11_RS22805	COG0477	Major facilitator Superfamily
DNQ11_RS22810	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DNQ11_RS22835	COG0735	belongs to the Fur family
DNQ11_RS22840	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DNQ11_RS22845	COG1121	(ABC) transporter
DNQ11_RS22850	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS22880	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DNQ11_RS22885	COG2384	SAM-dependent methyltransferase
DNQ11_RS22890	COG2010	Cytochrome c
DNQ11_RS22895	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DNQ11_RS22900	COG0358	DNA primase activity
DNQ11_RS22920	COG0517	IMP dehydrogenase activity
DNQ11_RS22935	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DNQ11_RS22940	COG0295	cytidine deaminase activity
DNQ11_RS22945	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DNQ11_RS22955	COG1480	7TM receptor with intracellular HD hydrolase
DNQ11_RS22960	COG1702	phosphate starvation-inducible protein PhoH
DNQ11_RS22980	COG1610	YqeY-like protein
DNQ11_RS22985	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DNQ11_RS22995	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DNQ11_RS23000	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DNQ11_RS23030	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DNQ11_RS23035	COG1733	regulation of RNA biosynthetic process
DNQ11_RS23060	COG1466	dna polymerase III delta subunit
DNQ11_RS23070	COG2333	competence protein COMEC
DNQ11_RS23070	COG0658	competence protein
DNQ11_RS23075	COG2131	deaminase
DNQ11_RS23080	COG1596	polysaccharide export
DNQ11_RS23080	COG1555	photosystem II stabilization
DNQ11_RS23085	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNQ11_RS23090	COG2226	methyltransferase
DNQ11_RS23095	COG0799	negative regulation of ribosome biogenesis
DNQ11_RS23100	COG1713	HD superfamily hydrolase involved in NAD metabolism
DNQ11_RS23110	COG1534	Rna-binding protein
DNQ11_RS23120	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DNQ11_RS23125	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DNQ11_RS23155	COG1595	DNA-templated transcription, initiation
DNQ11_RS23165	COG0778	Nitroreductase
DNQ11_RS23170	COG2357	RelA SpoT domain protein
DNQ11_RS23180	COG1785	Belongs to the alkaline phosphatase family
DNQ11_RS23190	COG2267	carboxylic ester hydrolase activity
DNQ11_RS23225	COG1404	Belongs to the peptidase S8 family
DNQ11_RS23230	COG3186	Phenylalanine-4-hydroxylase
DNQ11_RS23245	COG2259	Doxx family
DNQ11_RS23285	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_RS23295	COG1454	alcohol dehydrogenase
DNQ11_RS23295	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_RS23300	COG0626	cystathionine gamma-synthase activity
DNQ11_RS23305	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DNQ11_RS23330	COG0768	penicillin binding
DNQ11_RS23345	COG0826	peptidase U32
DNQ11_RS23350	COG0826	peptidase U32
DNQ11_RS23355	COG4122	O-methyltransferase activity
DNQ11_RS23360	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DNQ11_RS23380	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DNQ11_RS23390	COG0628	permease
DNQ11_RS23410	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DNQ11_RS23420	COG0482	sulfurtransferase activity
DNQ11_RS23425	COG1104	cysteine desulfurase activity
DNQ11_RS23430	COG1959	2 iron, 2 sulfur cluster binding
DNQ11_RS23435	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DNQ11_RS23445	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DNQ11_RS23475	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DNQ11_RS23485	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DNQ11_RS23485	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DNQ11_RS23490	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DNQ11_RS23495	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DNQ11_RS23495	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DNQ11_RS23505	COG2244	polysaccharide biosynthetic process
DNQ11_RS23510	COG2323	membrane
DNQ11_RS23520	COG1862	Preprotein translocase
DNQ11_RS23550	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DNQ11_RS23560	COG0697	spore germination
DNQ11_RS23565	COG0697	spore germination
DNQ11_RS23570	COG0640	Transcriptional regulator
DNQ11_RS23595	COG0157	Belongs to the NadC ModD family
DNQ11_RS23600	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DNQ11_RS23605	COG1104	cysteine desulfurase activity
DNQ11_RS23610	COG1827	regulation of RNA biosynthetic process
DNQ11_RS23615	COG2258	MOSC domain
DNQ11_RS23620	COG0077	Prephenate dehydratase
DNQ11_RS23625	COG0577	efflux transmembrane transporter activity
DNQ11_RS23630	COG0577	efflux transmembrane transporter activity
DNQ11_RS23635	COG1136	(ABC) transporter
DNQ11_RS23645	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS23650	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DNQ11_RS23655	COG3290	protein histidine kinase activity
DNQ11_RS23665	COG2868	ribosomal protein
DNQ11_RS23675	COG1530	ribonuclease E activity
DNQ11_RS23680	COG1994	Peptidase M50
DNQ11_RS23685	COG0739	heme binding
DNQ11_RS23690	COG2894	cell division
DNQ11_RS23710	COG1077	Cell shape determining protein MreB Mrl
DNQ11_RS23735	COG0285	dihydrofolate synthase activity
DNQ11_RS23740	COG0525	valine-tRNA ligase activity
DNQ11_RS23750	COG1388	LysM domain
DNQ11_RS23760	COG0113	porphobilinogen synthase activity
DNQ11_RS23765	COG1587	Uroporphyrinogen-III synthase
DNQ11_RS23775	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DNQ11_RS23785	COG1846	Transcriptional regulator
DNQ11_RS23790	COG1764	response to oxidative stress
DNQ11_RS23805	COG1067	ATP-dependent peptidase activity
DNQ11_RS23805	COG0470	DNA polymerase III
DNQ11_RS23860	COG0622	Phosphoesterase
DNQ11_RS23875	COG5401	PFAM Sporulation and spore germination
DNQ11_RS23895	COG1309	transcriptional regulator
DNQ11_RS23910	COG2197	response regulator
DNQ11_RS23915	COG2233	PERMEase
DNQ11_RS23925	COG0402	S-adenosylhomocysteine deaminase activity
DNQ11_RS23930	COG0402	S-adenosylhomocysteine deaminase activity
DNQ11_RS23940	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNQ11_RS23950	COG0444	Belongs to the ABC transporter superfamily
DNQ11_RS23955	COG4608	Belongs to the ABC transporter superfamily
DNQ11_RS23965	COG3279	Response regulator of the LytR AlgR family
DNQ11_RS23980	COG1983	PspC domain protein
DNQ11_RS23985	COG1396	sequence-specific DNA binding
DNQ11_RS23990	COG0697	spore germination
DNQ11_RS24000	COG1959	2 iron, 2 sulfur cluster binding
DNQ11_RS24005	COG1668	transmembrane transport
DNQ11_RS24010	COG4152	abc transporter atp-binding protein
DNQ11_RS24015	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DNQ11_RS24025	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DNQ11_RS24030	COG1876	peptidase activity
DNQ11_RS24035	COG0824	Thioesterase
DNQ11_RS24040	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DNQ11_RS24045	COG1053	succinate dehydrogenase
DNQ11_RS24050	COG2009	succinate dehydrogenase
DNQ11_RS24055	COG1719	4-vinyl reductase, 4VR
DNQ11_RS24065	COG3118	belongs to the thioredoxin family
DNQ11_RS24070	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DNQ11_RS24075	COG2086	electron transfer activity
DNQ11_RS24080	COG1024	Enoyl-CoA hydratase
DNQ11_RS24085	COG1309	transcriptional regulator
DNQ11_RS24090	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_RS24115	COG2318	DinB family
DNQ11_RS24145	COG1131	(ABC) transporter
DNQ11_RS24150	COG2205	protein histidine kinase activity
DNQ11_RS24155	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS24165	COG4895	conserved protein (DUF2196)
DNQ11_RS24170	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DNQ11_RS24185	COG4509	Sortase family
DNQ11_RS24190	COG1120	ATPase activity
DNQ11_RS24205	COG5386	Cell surface protein
DNQ11_RS24215	COG5386	Cell surface protein
DNQ11_RS24220	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_RS24225	COG1187	pseudouridine synthase activity
DNQ11_RS24240	COG1796	DNA polymerase
DNQ11_RS24240	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DNQ11_RS24245	COG1286	toxin biosynthetic process
DNQ11_RS24290	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNQ11_RS24300	COG1418	mRNA catabolic process
DNQ11_RS24325	COG2814	Major facilitator Superfamily
DNQ11_RS24330	COG1566	PFAM secretion protein HlyD family protein
DNQ11_RS24335	COG1309	transcriptional regulator
DNQ11_RS24340	COG1363	Peptidase, m42
DNQ11_RS24365	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DNQ11_RS24375	COG1484	DNA-dependent DNA replication
DNQ11_RS24380	COG3611	Membrane attachment protein
DNQ11_RS24390	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DNQ11_RS24400	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DNQ11_RS24405	COG0237	dephospho-CoA kinase activity
DNQ11_RS24410	COG1971	Probably functions as a manganese efflux pump
DNQ11_RS24420	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNQ11_RS24420	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNQ11_RS24425	COG5002	protein histidine kinase activity
DNQ11_RS24430	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS24455	COG0538	isocitrate dehydrogenase activity
DNQ11_RS24460	COG0372	Belongs to the citrate synthase family
DNQ11_RS24475	COG0628	permease
DNQ11_RS24480	COG3030	protein affecting phage T7 exclusion by the F plasmid
DNQ11_RS24505	COG1725	Transcriptional regulator
DNQ11_RS24510	COG0281	malic enzyme
DNQ11_RS24515	COG0587	DNA-directed DNA polymerase activity
DNQ11_RS24530	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DNQ11_RS24555	COG4109	DRTGG domain
DNQ11_RS24570	COG0006	proline dipeptidase activity
DNQ11_RS24610	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_RS24615	COG0662	Cupin 2, conserved barrel domain protein
DNQ11_RS24625	COG1476	TRANSCRIPTIONal
DNQ11_RS24640	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_RS24645	COG0589	response to stress
DNQ11_RS24695	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS24715	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DNQ11_RS24720	COG0827	DNA restriction-modification system
DNQ11_RS24725	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DNQ11_RS24730	COG3874	Sporulation protein YtfJ
DNQ11_RS24745	COG1574	metal-dependent hydrolase with the TIM-barrel fold
DNQ11_RS24755	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DNQ11_RS24770	COG1104	cysteine desulfurase activity
DNQ11_RS24780	COG0583	DNA-binding transcription factor activity
DNQ11_RS24785	COG0697	spore germination
DNQ11_RS24795	COG1956	GAF domain-containing protein
DNQ11_RS24800	COG0626	cystathionine gamma-synthase activity
DNQ11_RS24835	COG1595	DNA-templated transcription, initiation
DNQ11_RS24850	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DNQ11_RS24855	COG0454	-acetyltransferase
DNQ11_RS24860	COG0517	IMP dehydrogenase activity
DNQ11_RS24865	COG0123	including yeast histone deacetylase and acetoin utilization protein
DNQ11_RS24875	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS24885	COG0666	response to abiotic stimulus
DNQ11_RS24920	COG1609	Transcriptional regulator
DNQ11_RS24930	COG4851	CamS sex pheromone cAM373 precursor
DNQ11_RS24935	COG3118	belongs to the thioredoxin family
DNQ11_RS24945	COG2309	aminopeptidase activity
DNQ11_RS24965	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_RS24980	COG1674	ftsk spoiiie
DNQ11_RS24990	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNQ11_RS24995	COG4848	Belongs to the UPF0354 family
DNQ11_RS25000	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNQ11_RS25005	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
DNQ11_RS25010	COG1363	Peptidase, m42
DNQ11_RS25020	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_RS25035	COG0510	thiamine kinase activity
DNQ11_RS25040	COG1523	belongs to the glycosyl hydrolase 13 family
DNQ11_RS25060	COG1349	DNA-binding transcription factor activity
DNQ11_RS25065	COG1187	pseudouridine synthase activity
DNQ11_RS25070	COG2244	polysaccharide biosynthetic process
DNQ11_RS25075	COG2081	HI0933 family
DNQ11_RS25080	COG2814	Major facilitator Superfamily
DNQ11_RS25090	COG3832	glyoxalase III activity
DNQ11_RS25115	COG1329	Transcriptional regulator
DNQ11_RS25125	COG4975	Glucose uptake
DNQ11_RS25140	COG0314	molybdopterin synthase activity
DNQ11_RS25145	COG1763	Mo-molybdopterin cofactor biosynthetic process
DNQ11_RS25150	COG0303	'Molybdopterin
DNQ11_RS25160	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DNQ11_RS25185	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_RS25195	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DNQ11_RS25240	COG2814	Major facilitator Superfamily
DNQ11_RS25245	COG0475	glutathione-regulated potassium exporter activity
DNQ11_RS25250	COG0490	domain, Protein
DNQ11_RS25255	COG0582	viral genome integration into host DNA
DNQ11_RS25265	COG1136	(ABC) transporter
DNQ11_RS25285	COG1242	4 iron, 4 sulfur cluster binding
DNQ11_RS25290	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DNQ11_RS25300	COG1131	(ABC) transporter
DNQ11_RS25310	COG1794	racemase activity, acting on amino acids and derivatives
DNQ11_RS25335	COG2267	carboxylic ester hydrolase activity
DNQ11_RS25340	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DNQ11_RS25345	COG0671	phosphoesterase, PA-phosphatase related
DNQ11_RS25350	COG0438	transferase activity, transferring glycosyl groups
DNQ11_RS25360	COG0521	Mo-molybdopterin cofactor biosynthetic process
DNQ11_RS25420	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DNQ11_RS25425	COG5002	protein histidine kinase activity
DNQ11_RS25430	COG4191	Histidine kinase
DNQ11_RS25435	COG2267	carboxylic ester hydrolase activity
DNQ11_RS25440	COG1368	sulfuric ester hydrolase activity
DNQ11_RS25460	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DNQ11_RS25465	COG1116	anion transmembrane transporter activity
DNQ11_RS25470	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DNQ11_RS25495	COG0494	nUDIX hydrolase
DNQ11_RS25530	COG0288	reversible hydration of carbon dioxide
DNQ11_RS25535	COG1271	oxidase subunit
DNQ11_RS25540	COG1294	oxidase, subunit
DNQ11_RS25565	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS25590	COG1842	Phage shock protein A
DNQ11_RS25625	COG5002	protein histidine kinase activity
DNQ11_RS25630	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS25660	COG1597	lipid kinase activity
DNQ11_RS25700	COG0586	Pfam SNARE associated Golgi protein
DNQ11_RS25710	COG0577	efflux transmembrane transporter activity
DNQ11_RS25715	COG1136	(ABC) transporter
DNQ11_RS25720	COG2207	Transcriptional regulator
DNQ11_RS25720	COG3708	Transcriptional regulator
DNQ11_RS25725	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS25730	COG2205	protein histidine kinase activity
DNQ11_RS25740	COG0577	efflux transmembrane transporter activity
DNQ11_RS25745	COG1136	(ABC) transporter
DNQ11_RS25765	COG2188	Transcriptional regulator
DNQ11_RS25785	COG3964	amidohydrolase
DNQ11_RS25815	COG4948	Mandelate Racemase Muconate Lactonizing
DNQ11_RS25825	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DNQ11_RS25830	COG0596	Alpha beta hydrolase
DNQ11_RS25835	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
DNQ11_RS25840	COG1169	isochorismate synthase
DNQ11_RS25845	COG1575	Belongs to the MenA family. Type 1 subfamily
DNQ11_RS25850	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DNQ11_RS25875	COG0058	SHG alpha-glucan phosphorylase activity
DNQ11_RS25880	COG0297	glycogen (starch) synthase activity
DNQ11_RS25885	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DNQ11_RS26015	COG0544	peptidyl-prolyl cis-trans isomerase activity
DNQ11_RS26055	COG1285	pathogenesis
DNQ11_RS26060	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DNQ11_RS26070	COG0166	Belongs to the GPI family
DNQ11_RS26080	COG2155	Conserved Protein
DNQ11_RS26085	COG1098	S1 RNA binding domain
DNQ11_RS26090	COG0436	Aminotransferase
DNQ11_RS26095	COG1522	sequence-specific DNA binding
DNQ11_RS26100	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNQ11_RS26105	COG2267	carboxylic ester hydrolase activity
DNQ11_RS26115	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DNQ11_RS26130	COG5018	Exonuclease
DNQ11_RS26135	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DNQ11_RS26160	COG2050	protein possibly involved in aromatic compounds catabolism
DNQ11_RS26170	COG1268	BioY protein
DNQ11_RS26180	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DNQ11_RS26185	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DNQ11_RS26200	COG3584	3D domain protein
DNQ11_RS26215	COG1252	NADH dehydrogenase
DNQ11_RS26230	COG3708	Transcriptional regulator
DNQ11_RS26245	COG1683	Conserved Protein
DNQ11_RS26265	COG0316	Belongs to the HesB IscA family
DNQ11_RS26280	COG1252	NADH dehydrogenase
DNQ11_RS26295	COG0390	transport system, permease component
DNQ11_RS26300	COG2824	Alkylphosphonate utilization operon protein PhnA
DNQ11_RS26340	COG4837	Protein of unknown function (DUF1462)
DNQ11_RS26345	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DNQ11_RS26360	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DNQ11_RS26365	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DNQ11_RS26375	COG2249	NAD(P)H dehydrogenase (quinone) activity
DNQ11_RS26380	COG0647	UMP catabolic process
DNQ11_RS26390	COG2445	Protein of unknown function DUF86
DNQ11_RS26395	COG1494	fructose-1,6-bisphosphatase
DNQ11_RS26415	COG4470	Protein conserved in bacteria
DNQ11_RS26425	COG0789	Transcriptional regulator
DNQ11_RS26430	COG4377	Putative membrane peptidase family (DUF2324)
DNQ11_RS26455	COG0739	heme binding
DNQ11_RS26465	COG3377	Domain of unknown function (DUF1805)
DNQ11_RS26470	COG0737	Belongs to the 5'-nucleotidase family
DNQ11_RS26485	COG1695	Transcriptional regulator
DNQ11_RS26500	COG0719	Fe-S assembly protein
DNQ11_RS26505	COG0822	iron-sulfur transferase activity
DNQ11_RS26510	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DNQ11_RS26515	COG0719	Fe-S assembly protein
DNQ11_RS26520	COG0396	ATPase activity
DNQ11_RS26525	COG1464	Belongs to the NlpA lipoprotein family
DNQ11_RS26530	COG1464	Belongs to the NlpA lipoprotein family
DNQ11_RS26535	COG2011	ABC-type metal ion transport system permease component
DNQ11_RS26540	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNQ11_RS26550	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNQ11_RS26555	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DNQ11_RS26575	COG1393	Belongs to the ArsC family
DNQ11_RS26630	COG0039	L-malate dehydrogenase activity
DNQ11_RS26655	COG1309	transcriptional regulator
DNQ11_RS26660	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_RS26665	COG1960	acyl-CoA dehydrogenase activity
DNQ11_RS26675	COG0183	Belongs to the thiolase family
DNQ11_RS26680	COG1250	3-hydroxyacyl-CoA dehydrogenase
DNQ11_RS26680	COG1024	Enoyl-CoA hydratase
DNQ11_RS26695	COG1686	Belongs to the peptidase S11 family
DNQ11_RS26710	COG0011	TIGRFAM Protein of
DNQ11_RS26715	COG0840	transmembrane signaling receptor activity
DNQ11_RS26735	COG2814	Major facilitator Superfamily
DNQ11_RS26740	COG0531	amino acid
DNQ11_RS26750	COG0706	membrane insertase activity
DNQ11_RS26760	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_RS26800	COG0586	Pfam SNARE associated Golgi protein
DNQ11_RS26810	COG1376	ErfK ybiS ycfS ynhG family protein
DNQ11_RS26815	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS26820	COG5002	protein histidine kinase activity
DNQ11_RS26845	COG2151	metal-sulfur cluster biosynthetic enzyme
DNQ11_RS26850	COG3227	Zinc metalloprotease (Elastase)
DNQ11_RS26855	COG1741	Belongs to the pirin family
DNQ11_RS26870	COG0475	glutathione-regulated potassium exporter activity
DNQ11_RS26875	COG0490	domain, Protein
DNQ11_RS26885	COG1115	amino acid carrier protein
DNQ11_RS26890	COG0783	Belongs to the Dps family
DNQ11_RS26905	COG1611	Belongs to the LOG family
DNQ11_RS26925	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_RS26930	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_RS26935	COG1115	amino acid carrier protein
DNQ11_RS26940	COG1115	amino acid carrier protein
DNQ11_RS26945	COG2910	NAD(P)H-binding
DNQ11_RS26975	COG0656	L-ascorbic acid biosynthetic process
DNQ11_RS26980	COG2814	Major facilitator Superfamily
DNQ11_RS26985	COG1733	regulation of RNA biosynthetic process
DNQ11_RS26995	COG1252	NADH dehydrogenase
DNQ11_RS27000	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DNQ11_RS27005	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DNQ11_RS27015	COG0840	transmembrane signaling receptor activity
DNQ11_RS27015	COG3290	protein histidine kinase activity
DNQ11_RS27025	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNQ11_RS27030	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNQ11_RS27045	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_RS27110	COG0557	exoribonuclease II activity
DNQ11_RS27115	COG1647	Serine aminopeptidase, S33
DNQ11_RS27120	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DNQ11_RS27125	COG1346	cytolysis
DNQ11_RS27235	COG4695	Portal protein
DNQ11_RS27260	COG4974	Belongs to the 'phage' integrase family
DNQ11_RS27270	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DNQ11_RS27275	COG0149	triose-phosphate isomerase activity
DNQ11_RS27285	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DNQ11_RS27300	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DNQ11_RS27325	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_RS27340	COG2323	membrane
DNQ11_RS27345	COG0740	serine-type endopeptidase activity
DNQ11_RS27355	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNQ11_RS27365	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DNQ11_RS27375	COG1051	belongs to the nudix hydrolase family
DNQ11_RS27385	COG0492	ferredoxin-NADP+ reductase activity
DNQ11_RS27390	COG0457	Tetratricopeptide repeat
DNQ11_RS27395	COG0110	maltose O-acetyltransferase activity
DNQ11_RS27415	COG1950	PFAM Membrane protein of
DNQ11_RS27425	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DNQ11_RS27430	COG0556	nucleotide-excision repair
DNQ11_RS27450	COG0789	Transcriptional regulator
DNQ11_RS27485	COG0583	DNA-binding transcription factor activity
DNQ11_RS27495	COG0655	NAD(P)H dehydrogenase (quinone) activity
DNQ11_RS27500	COG0488	(ABC) transporter
DNQ11_RS27510	COG1132	(ABC) transporter
DNQ11_RS27515	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DNQ11_RS27520	COG0793	Belongs to the peptidase S41A family
DNQ11_RS27520	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_RS27525	COG2177	Part of the ABC transporter FtsEX involved in
DNQ11_RS27530	COG2884	Cell division ATP-binding protein ftsE
DNQ11_RS27550	COG0653	protein targeting
DNQ11_RS27555	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DNQ11_RS27560	COG1278	Cold shock
DNQ11_RS27565	COG1040	competence protein
DNQ11_RS27570	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DNQ11_RS27575	COG1388	LysM domain
DNQ11_RS27575	COG0791	NLP P60 protein
DNQ11_RS27580	COG1733	regulation of RNA biosynthetic process
DNQ11_RS27590	COG1307	EDD domain protein, DegV family
DNQ11_RS27595	COG1739	Uncharacterized protein family UPF0029
DNQ11_RS27600	COG1316	TRANSCRIPTIONal
DNQ11_RS27605	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DNQ11_RS27610	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DNQ11_RS27615	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DNQ11_RS27625	COG3933	PFAM sigma-54 factor interaction domain-containing protein
DNQ11_RS27625	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DNQ11_RS27640	COG3394	polysaccharide catabolic process
DNQ11_RS27645	COG1486	melibiose metabolic process
DNQ11_RS27650	COG1447	Phosphotransferase system cellobiose-specific component IIA
DNQ11_RS27655	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DNQ11_RS27665	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DNQ11_RS27670	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DNQ11_RS27675	COG1447	Phosphotransferase system cellobiose-specific component IIA
DNQ11_RS27685	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DNQ11_RS27690	COG1301	dicarboxylic acid transport
DNQ11_RS27700	COG0346	lactoylglutathione lyase activity
DNQ11_RS27705	COG1511	domain protein
DNQ11_RS27710	COG0583	DNA-binding transcription factor activity
DNQ11_RS27715	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DNQ11_RS27735	COG1271	oxidase subunit
DNQ11_RS27740	COG1294	oxidase, subunit
DNQ11_RS27745	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DNQ11_RS27755	COG1620	l-lactate permease
DNQ11_RS27765	COG2389	metal-binding protein
DNQ11_RS27780	COG1368	sulfuric ester hydrolase activity
DNQ11_RS27800	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_RS27810	COG1215	transferase activity, transferring glycosyl groups
DNQ11_RS27820	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DNQ11_RS27830	COG3584	3D domain protein
DNQ11_RS27830	COG1388	LysM domain
DNQ11_RS27855	COG4715	Zinc finger, swim domain protein
DNQ11_RS27860	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DNQ11_RS27900	COG0577	efflux transmembrane transporter activity
DNQ11_RS27905	COG1136	(ABC) transporter
DNQ11_RS27940	COG5002	protein histidine kinase activity
DNQ11_RS27945	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS27950	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DNQ11_RS27970	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DNQ11_RS27975	COG1134	teichoic acid transport
DNQ11_RS27980	COG1682	transport, permease protein
DNQ11_RS27985	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DNQ11_RS28030	COG1609	Transcriptional regulator
DNQ11_RS28045	COG0739	heme binding
DNQ11_RS28065	COG2385	sporulation resulting in formation of a cellular spore
DNQ11_RS28080	COG4836	Membrane
DNQ11_RS28090	COG1007	ATP synthesis coupled electron transport
DNQ11_RS28095	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DNQ11_RS28100	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DNQ11_RS28110	COG0839	Belongs to the complex I subunit 6 family
DNQ11_RS28125	COG0649	NAD binding
DNQ11_RS28130	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DNQ11_RS28145	COG5001	Diguanylate cyclase
DNQ11_RS28145	COG3300	MHYT domain
DNQ11_RS28195	COG0356	it plays a direct role in the translocation of protons across the membrane
DNQ11_RS28230	COG0698	ribose 5-phosphate isomerase
DNQ11_RS28245	COG2190	(PTS) system
DNQ11_RS28250	COG2259	Doxx family
DNQ11_RS28255	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DNQ11_RS28275	COG0009	L-threonylcarbamoyladenylate synthase
DNQ11_RS28290	COG2890	protein-(glutamine-N5) methyltransferase activity
DNQ11_RS28310	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DNQ11_RS28315	COG1494	fructose-1,6-bisphosphatase
DNQ11_RS28340	COG4821	SIS domain
DNQ11_RS28350	COG3343	RNA polymerase activity
DNQ11_RS28360	COG1960	acyl-CoA dehydrogenase activity
DNQ11_RS28365	COG1960	acyl-CoA dehydrogenase activity
DNQ11_RS28370	COG1250	3-hydroxyacyl-CoA dehydrogenase
DNQ11_RS28375	COG0183	Belongs to the thiolase family
DNQ11_RS28380	COG2181	nitrate reductase activity
DNQ11_RS28380	COG0247	lactate metabolic process
DNQ11_RS28385	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNQ11_RS28395	COG5001	Diguanylate cyclase
DNQ11_RS28395	COG3300	MHYT domain
DNQ11_RS28415	COG2197	response regulator
DNQ11_RS28420	COG4585	Histidine kinase
DNQ11_RS28425	COG0842	Transport permease protein
DNQ11_RS28430	COG1131	(ABC) transporter
DNQ11_RS28435	COG0024	Methionine aminopeptidase
DNQ11_RS28455	COG2234	aminopeptidase activity
DNQ11_RS28475	COG1595	DNA-templated transcription, initiation
DNQ11_RS28480	COG0018	arginyl-trna synthetase
DNQ11_RS28485	COG4506	Protein conserved in bacteria
DNQ11_RS28490	COG1619	proteins homologs of microcin C7 resistance protein MccF
DNQ11_RS28510	COG0010	Belongs to the arginase family
DNQ11_RS28520	COG2814	Major facilitator Superfamily
DNQ11_RS28525	COG0789	Transcriptional regulator
DNQ11_RS28530	COG0584	glycerophosphoryl diester phosphodiesterase
DNQ11_RS28535	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNQ11_RS28550	COG1994	Peptidase M50
DNQ11_RS28560	COG1078	dGTPase activity
DNQ11_RS28565	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_RS28575	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_RS28600	COG0095	Lipoate-protein ligase
DNQ11_RS28605	COG0280	phosphate acetyltransferase
DNQ11_RS28620	COG3773	Cell wall hydrolase
DNQ11_RS28630	COG2363	Small membrane protein
DNQ11_RS28640	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DNQ11_RS28645	COG2233	PERMEase
DNQ11_RS28650	COG0561	phosphatase activity
DNQ11_RS28655	COG2814	Major facilitator Superfamily
DNQ11_RS28665	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DNQ11_RS28670	COG1131	(ABC) transporter
DNQ11_RS28675	COG2755	lipolytic protein G-D-S-L family
DNQ11_RS28680	COG1609	Transcriptional regulator
DNQ11_RS28700	COG2873	o-acetylhomoserine
DNQ11_RS28715	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DNQ11_RS28725	COG2197	response regulator
DNQ11_RS28735	COG0351	phosphomethylpyrimidine kinase
DNQ11_RS28740	COG3706	GGDEF domain
DNQ11_RS28745	COG2879	small protein
DNQ11_RS28750	COG1966	Carbon starvation protein
DNQ11_RS28755	COG3279	Response regulator of the LytR AlgR family
DNQ11_RS28760	COG0477	Major facilitator Superfamily
DNQ11_RS28785	COG0840	transmembrane signaling receptor activity
DNQ11_RS28795	COG1607	acyl-coa hydrolase
DNQ11_RS28810	COG0488	(ABC) transporter
DNQ11_RS28840	COG0463	Glycosyl transferase, family 2
DNQ11_RS28845	COG1309	transcriptional regulator
DNQ11_RS28850	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DNQ11_RS28855	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DNQ11_RS28855	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DNQ11_RS28860	COG0628	permease
DNQ11_RS28875	COG3279	Response regulator of the LytR AlgR family
DNQ11_RS28880	COG3275	phosphorelay sensor kinase activity
DNQ11_RS28885	COG2814	Major facilitator Superfamily
DNQ11_RS28890	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DNQ11_RS28895	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
DNQ11_RS28905	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DNQ11_RS28925	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DNQ11_RS28930	COG1272	protein, Hemolysin III
DNQ11_RS28950	COG0516	GMP reductase activity
DNQ11_RS28955	COG1164	Oligoendopeptidase f
DNQ11_RS28975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DNQ11_RS28980	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DNQ11_RS28985	COG4853	Protein conserved in bacteria
DNQ11_RS28990	COG4863	YycH protein
DNQ11_RS28995	COG5002	protein histidine kinase activity
DNQ11_RS29000	COG0745	RESPONSE REGULATOR receiver
DNQ11_RS29030	COG0305	Participates in initiation and elongation during chromosome replication
DNQ11_RS29040	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
DNQ11_RS29045	COG4241	membrane
DNQ11_RS29055	COG0629	single-stranded DNA binding
DNQ11_RS29065	COG0012	GTP binding
DNQ11_RS29070	COG4481	Protein conserved in bacteria
DNQ11_RS29075	COG0668	transmembrane transport
DNQ11_RS29085	COG1475	DNA binding
DNQ11_RS29090	COG1192	Involved in chromosome partitioning
DNQ11_RS29115	COG1847	R3H domain protein
DNQ11_RS29120	COG0706	membrane insertase activity
DNQ11_RS29130	COG0230	Belongs to the bacterial ribosomal protein bL34 family
DNQ11_RS29185	COG3344	reverse transcriptase
DNQ11_RS29280	COG3344	reverse transcriptase
DNQ11_RS29490	COG4962	Type ii secretion system protein e
DNQ11_RS29625	COG2311	Membrane
DNQ11_RS29645	COG4196	transglutaminase domain protein
DNQ11_RS29650	COG0671	phosphoesterase, PA-phosphatase related
DNQ11_RS29675	COG1215	transferase activity, transferring glycosyl groups
DNQ11_RS29680	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DNQ11_RS29685	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DNQ11_RS29875	COG4974	Belongs to the 'phage' integrase family
DNQ11_RS29930	COG3443	Belongs to the bacterial solute-binding protein 9 family
DNQ11_RS29945	COG4974	Belongs to the 'phage' integrase family
DNQ11_RS29970	COG0457	Tetratricopeptide repeat
DNQ11_RS30050	COG0791	NLP P60 protein
DNQ11_RS30050	COG0741	lytic transglycosylase activity
DNQ11_RS30215	COG1192	Involved in chromosome partitioning
DNQ11_RS30270	COG1683	Conserved Protein
DNQ11_RS30275	COG1309	transcriptional regulator
DNQ11_RS30360	COG0681	Belongs to the peptidase S26 family
DNQ11_RS30385	COG1280	lysine exporter protein (LysE YggA)
DNQ11_RS30425	COG4166	transmembrane transport
DNQ11_RS30440	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII