locus-tag class description KM388_RS00005 PF00308 Bacterial dnaA protein KM388_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix KM388_RS00005 PF11638 DnaA N-terminal domain KM388_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM388_RS00010 PF02767 DNA polymerase III beta subunit, central domain KM388_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM388_RS00020 PF02463 RecF/RecN/SMC N terminal domain KM388_RS00025 PF01751 Toprim domain KM388_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS00025 PF00204 DNA gyrase B KM388_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM388_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM388_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM388_RS00065 PF00571 CBS domain KM388_RS00065 PF00478 IMP dehydrogenase / GMP reductase domain KM388_RS00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM388_RS00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM388_RS00075 PF01680 SOR/SNZ family KM388_RS00080 PF01174 SNO glutamine amidotransferase family KM388_RS00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM388_RS00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM388_RS00100 PF01712 Deoxynucleoside kinase KM388_RS00105 PF01712 Deoxynucleoside kinase KM388_RS00110 PF00857 Isochorismatase family KM388_RS00115 PF14437 MafB19-like deaminase KM388_RS00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM388_RS00130 PF02575 YbaB/EbfC DNA-binding family KM388_RS00135 PF13662 Toprim domain KM388_RS00135 PF02132 RecR protein KM388_RS00140 PF10704 Protein of unknown function (DUF2508) KM388_RS00145 PF07441 SigmaK-factor processing regulatory protein BofA KM388_RS00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM388_RS00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM388_RS00185 PF02223 Thymidylate kinase KM388_RS00190 PF09115 DNA polymerase III, delta subunit, C terminal KM388_RS00195 PF04468 PSP1 C-terminal conserved region KM388_RS00200 PF06156 Initiation control protein YabA KM388_RS00205 PF05175 Methyltransferase small domain KM388_RS00210 PF01541 GIY-YIG catalytic domain KM388_RS00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM388_RS00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM388_RS00220 PF18277 AbrB C-terminal domain KM388_RS00225 PF01588 Putative tRNA binding domain KM388_RS00225 PF09334 tRNA synthetases class I (M) KM388_RS00225 PF08264 Anticodon-binding domain of tRNA KM388_RS00230 PF01026 TatD related DNase KM388_RS00235 PF13331 Domain of unknown function (DUF4093) KM388_RS00235 PF13662 Toprim domain KM388_RS00240 PF00398 Ribosomal RNA adenine dimethylase KM388_RS00245 PF05582 YabG peptidase U57 KM388_RS00250 PF06257 Biofilm formation stimulator VEG KM388_RS00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM388_RS00260 PF08544 GHMP kinases C terminal KM388_RS00260 PF00288 GHMP kinases N terminal domain KM388_RS00265 PF00156 Phosphoribosyl transferase domain KM388_RS00265 PF09182 Bacterial purine repressor, N-terminal KM388_RS00270 PF01042 Endoribonuclease L-PSP KM388_RS00275 PF04026 SpoVG KM388_RS00280 PF00483 Nucleotidyl transferase KM388_RS00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM388_RS00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM388_RS00285 PF14572 Phosphoribosyl synthetase-associated domain KM388_RS00290 PF01195 Peptidyl-tRNA hydrolase KM388_RS00300 PF03461 TRCF domain KM388_RS00300 PF02559 CarD-like/TRCF domain KM388_RS00300 PF00270 DEAD/DEAH box helicase KM388_RS00300 PF00271 Helicase conserved C-terminal domain KM388_RS00300 PF17757 UvrB interaction domain KM388_RS00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM388_RS00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM388_RS00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM388_RS00310 PF01943 Polysaccharide biosynthesis protein KM388_RS00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM388_RS00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM388_RS00320 PF01479 S4 domain KM388_RS00325 PF07873 YabP family KM388_RS00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM388_RS00340 PF00575 S1 RNA binding domain KM388_RS00355 PF07228 Stage II sporulation protein E (SpoIIE) KM388_RS00360 PF09179 TilS substrate binding domain KM388_RS00360 PF11734 TilS substrate C-terminal domain KM388_RS00360 PF01171 PP-loop family KM388_RS00365 PF00156 Phosphoribosyl transferase domain KM388_RS00370 PF00004 ATPase family associated with various cellular activities (AAA) KM388_RS00370 PF17862 AAA+ lid domain KM388_RS00370 PF06480 FtsH Extracellular KM388_RS00370 PF01434 Peptidase family M41 KM388_RS00375 PF03309 Type III pantothenate kinase KM388_RS00380 PF01430 Hsp33 protein KM388_RS00385 PF00291 Pyridoxal-phosphate dependent enzyme KM388_RS00390 PF04715 Anthranilate synthase component I, N terminal region KM388_RS00390 PF00425 chorismate binding enzyme KM388_RS00395 PF00117 Glutamine amidotransferase class-I KM388_RS00400 PF01063 Amino-transferase class IV KM388_RS00405 PF00809 Pterin binding enzyme KM388_RS00410 PF02152 Dihydroneopterin aldolase KM388_RS00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM388_RS00420 PF01381 Helix-turn-helix KM388_RS00425 PF01207 Dihydrouridine synthase (Dus) KM388_RS00430 PF01336 OB-fold nucleic acid binding domain KM388_RS00430 PF00152 tRNA synthetases class II (D, K and N) KM388_RS00450 PF17727 CtsR C-terminal dimerization domain KM388_RS00450 PF05848 CtsR N-terminal HTH domain KM388_RS00455 PF02151 UvrB/uvrC motif KM388_RS00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM388_RS00465 PF02861 Clp amino terminal domain, pathogenicity island component KM388_RS00465 PF07724 AAA domain (Cdc48 subfamily) KM388_RS00465 PF17871 AAA lid domain KM388_RS00465 PF00004 ATPase family associated with various cellular activities (AAA) KM388_RS00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM388_RS00470 PF18073 Rubredoxin metal binding domain KM388_RS00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM388_RS00475 PF10635 DisA bacterial checkpoint controller linker region KM388_RS00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM388_RS00490 PF02542 YgbB family KM388_RS00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM388_RS00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM388_RS00500 PF06426 Serine acetyltransferase, N-terminal KM388_RS00505 PF09190 DALR domain KM388_RS00505 PF01406 tRNA synthetases class I (C) catalytic domain KM388_RS00510 PF00636 Ribonuclease III domain KM388_RS00515 PF00588 SpoU rRNA Methylase family KM388_RS00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM388_RS00520 PF05991 YacP-like NYN domain KM388_RS00525 PF08281 Sigma-70, region 4 KM388_RS00525 PF04542 Sigma-70 region 2 KM388_RS00530 PF00471 Ribosomal protein L33 KM388_RS00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM388_RS00540 PF02357 Transcription termination factor nusG KM388_RS00540 PF00467 KOW motif KM388_RS00545 PF03946 Ribosomal protein L11, N-terminal domain KM388_RS00545 PF00298 Ribosomal protein L11, RNA binding domain KM388_RS00550 PF00687 Ribosomal protein L1p/L10e family KM388_RS00555 PF00466 Ribosomal protein L10 KM388_RS00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM388_RS00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM388_RS00565 PF05175 Methyltransferase small domain KM388_RS00570 PF04560 RNA polymerase Rpb2, domain 7 KM388_RS00570 PF00562 RNA polymerase Rpb2, domain 6 KM388_RS00570 PF10385 RNA polymerase beta subunit external 1 domain KM388_RS00570 PF04565 RNA polymerase Rpb2, domain 3 KM388_RS00570 PF04561 RNA polymerase Rpb2, domain 2 KM388_RS00570 PF04563 RNA polymerase beta subunit KM388_RS00575 PF04998 RNA polymerase Rpb1, domain 5 KM388_RS00575 PF04983 RNA polymerase Rpb1, domain 3 KM388_RS00575 PF00623 RNA polymerase Rpb1, domain 2 KM388_RS00575 PF04997 RNA polymerase Rpb1, domain 1 KM388_RS00575 PF05000 RNA polymerase Rpb1, domain 4 KM388_RS00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM388_RS00585 PF00164 Ribosomal protein S12/S23 KM388_RS00590 PF00177 Ribosomal protein S7p/S5e KM388_RS00595 PF03144 Elongation factor Tu domain 2 KM388_RS00595 PF00009 Elongation factor Tu GTP binding domain KM388_RS00595 PF03764 Elongation factor G, domain IV KM388_RS00595 PF14492 Elongation Factor G, domain II KM388_RS00595 PF00679 Elongation factor G C-terminus KM388_RS00600 PF03143 Elongation factor Tu C-terminal domain KM388_RS00600 PF00009 Elongation factor Tu GTP binding domain KM388_RS00600 PF03144 Elongation factor Tu domain 2 KM388_RS00605 PF00338 Ribosomal protein S10p/S20e KM388_RS00610 PF00297 Ribosomal protein L3 KM388_RS00615 PF00573 Ribosomal protein L4/L1 family KM388_RS00620 PF00276 Ribosomal protein L23 KM388_RS00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM388_RS00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM388_RS00630 PF00203 Ribosomal protein S19 KM388_RS00635 PF00237 Ribosomal protein L22p/L17e KM388_RS00640 PF07650 KH domain KM388_RS00640 PF00189 Ribosomal protein S3, C-terminal domain KM388_RS00645 PF00252 Ribosomal protein L16p/L10e KM388_RS00650 PF00831 Ribosomal L29 protein KM388_RS00655 PF00366 Ribosomal protein S17 KM388_RS00660 PF00238 Ribosomal protein L14p/L23e KM388_RS00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM388_RS00665 PF00467 KOW motif KM388_RS00670 PF00673 ribosomal L5P family C-terminus KM388_RS00670 PF00281 Ribosomal protein L5 KM388_RS00675 PF00253 Ribosomal protein S14p/S29e KM388_RS00680 PF00410 Ribosomal protein S8 KM388_RS00685 PF00347 Ribosomal protein L6 KM388_RS00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM388_RS00695 PF03719 Ribosomal protein S5, C-terminal domain KM388_RS00695 PF00333 Ribosomal protein S5, N-terminal domain KM388_RS00700 PF00327 Ribosomal protein L30p/L7e KM388_RS00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM388_RS00710 PF00344 SecY translocase KM388_RS00715 PF05191 Adenylate kinase, active site lid KM388_RS00720 PF00557 Metallopeptidase family M24 KM388_RS00725 PF01176 Translation initiation factor 1A / IF-1 KM388_RS00730 PF00444 Ribosomal protein L36 KM388_RS00735 PF00416 Ribosomal protein S13/S18 KM388_RS00740 PF00411 Ribosomal protein S11 KM388_RS00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM388_RS00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM388_RS00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM388_RS00750 PF01196 Ribosomal protein L17 KM388_RS00755 PF00005 ABC transporter KM388_RS00760 PF00005 ABC transporter KM388_RS00765 PF02361 Cobalt transport protein KM388_RS00770 PF01416 tRNA pseudouridine synthase KM388_RS00775 PF00572 Ribosomal protein L13 KM388_RS00780 PF00380 Ribosomal protein S9/S16 KM388_RS00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM388_RS00795 PF10609 NUBPL iron-transfer P-loop NTPase KM388_RS00800 PF17898 Spore germination GerD central core domain KM388_RS00805 PF14089 KinB-signalling pathway activation in sporulation KM388_RS00810 PF01522 Polysaccharide deacetylase KM388_RS00885 PF00491 Arginase family KM388_RS00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM388_RS00895 PF07949 YbbR-like protein KM388_RS00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM388_RS00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM388_RS00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM388_RS00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM388_RS00910 PF01380 SIS domain KM388_RS00915 PF00561 alpha/beta hydrolase fold KM388_RS00920 PF07729 FCD domain KM388_RS00920 PF00392 Bacterial regulatory proteins, gntR family KM388_RS00925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM388_RS00925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM388_RS00930 PF02447 GntP family permease KM388_RS00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM388_RS00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM388_RS00940 PF00326 Prolyl oligopeptidase family KM388_RS00940 PF07676 WD40-like Beta Propeller Repeat KM388_RS00975 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS00980 PF09383 NIL domain KM388_RS00980 PF00005 ABC transporter KM388_RS00985 PF03180 NLPA lipoprotein KM388_RS00990 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS00990 PF00107 Zinc-binding dehydrogenase KM388_RS01005 PF07690 Major Facilitator Superfamily KM388_RS01015 PF07690 Major Facilitator Superfamily KM388_RS01030 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM388_RS01035 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS01040 PF00005 ABC transporter KM388_RS01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS01045 PF00005 ABC transporter KM388_RS01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS01060 PF12833 Helix-turn-helix domain KM388_RS01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS01085 PF00248 Aldo/keto reductase family KM388_RS01095 PF04973 Nicotinamide mononucleotide transporter KM388_RS01100 PF06800 Sugar transport protein KM388_RS01105 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS01115 PF12728 Helix-turn-helix domain KM388_RS01115 PF12727 PBP superfamily domain KM388_RS01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS01125 PF03466 LysR substrate binding domain KM388_RS01130 PF00892 EamA-like transporter family KM388_RS01135 PF14142 YrzO-like protein KM388_RS01145 PF01553 Acyltransferase KM388_RS01155 PF00356 Bacterial regulatory proteins, lacI family KM388_RS01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM388_RS01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM388_RS01175 PF01026 TatD related DNase KM388_RS01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM388_RS01205 PF00005 ABC transporter KM388_RS01205 PF16326 ABC transporter C-terminal domain KM388_RS01205 PF12848 ABC transporter KM388_RS01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS01225 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS01230 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM388_RS01235 PF00005 ABC transporter KM388_RS01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS01240 PF00005 ABC transporter KM388_RS01265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS01270 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM388_RS01280 PF07690 Major Facilitator Superfamily KM388_RS01290 PF01225 Mur ligase family, catalytic domain KM388_RS01290 PF02875 Mur ligase family, glutamate ligase domain KM388_RS01290 PF08245 Mur ligase middle domain KM388_RS01295 PF00270 DEAD/DEAH box helicase KM388_RS01295 PF00271 Helicase conserved C-terminal domain KM388_RS01300 PF03851 UV-endonuclease UvdE KM388_RS01305 PF01694 Rhomboid family KM388_RS01310 PF01648 4'-phosphopantetheinyl transferase superfamily KM388_RS01320 PF00842 Alanine racemase, C-terminal domain KM388_RS01320 PF01168 Alanine racemase, N-terminal domain KM388_RS01325 PF01402 Ribbon-helix-helix protein, copG family KM388_RS01330 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM388_RS01335 PF09371 Tex-like protein N-terminal domain KM388_RS01335 PF16921 Tex protein YqgF-like domain KM388_RS01335 PF00575 S1 RNA binding domain KM388_RS01335 PF17674 HHH domain KM388_RS01345 PF10263 SprT-like family KM388_RS01345 PF17283 SprT-like zinc ribbon domain KM388_RS01430 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM388_RS01435 PF00814 Glycoprotease family KM388_RS01440 PF00583 Acetyltransferase (GNAT) family KM388_RS01445 PF00814 Glycoprotease family KM388_RS01450 PF00005 ABC transporter KM388_RS01450 PF16326 ABC transporter C-terminal domain KM388_RS01450 PF12848 ABC transporter KM388_RS01455 PF06971 Putative DNA-binding protein N-terminus KM388_RS01455 PF02629 CoA binding domain KM388_RS01465 PF02517 CPBP intramembrane metalloprotease KM388_RS01470 PF00166 Chaperonin 10 Kd subunit KM388_RS01475 PF00118 TCP-1/cpn60 chaperonin family KM388_RS01480 PF02540 NAD synthase KM388_RS01480 PF00958 GMP synthase C terminal domain KM388_RS01480 PF00117 Glutamine amidotransferase class-I KM388_RS01485 PF00860 Permease family KM388_RS01490 PF00486 Transcriptional regulatory protein, C terminal KM388_RS01490 PF00072 Response regulator receiver domain KM388_RS01495 PF16736 Single Cache-like KM388_RS01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS01495 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS01495 PF00989 PAS fold KM388_RS01520 PF02673 Bacitracin resistance protein BacA KM388_RS01530 PF00005 ABC transporter KM388_RS01535 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS01540 PF00486 Transcriptional regulatory protein, C terminal KM388_RS01540 PF00072 Response regulator receiver domain KM388_RS01565 PF02673 Bacitracin resistance protein BacA KM388_RS01575 PF00005 ABC transporter KM388_RS01580 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS01585 PF00486 Transcriptional regulatory protein, C terminal KM388_RS01585 PF00072 Response regulator receiver domain KM388_RS01610 PF00731 AIR carboxylase KM388_RS01615 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM388_RS01615 PF02222 ATP-grasp domain KM388_RS01620 PF00206 Lyase KM388_RS01620 PF10397 Adenylosuccinate lyase C-terminus KM388_RS01625 PF01259 SAICAR synthetase KM388_RS01630 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM388_RS01640 PF02769 AIR synthase related protein, C-terminal domain KM388_RS01640 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM388_RS01640 PF00586 AIR synthase related protein, N-terminal domain KM388_RS01645 PF00156 Phosphoribosyl transferase domain KM388_RS01650 PF00586 AIR synthase related protein, N-terminal domain KM388_RS01650 PF02769 AIR synthase related protein, C-terminal domain KM388_RS01655 PF00551 Formyl transferase KM388_RS01660 PF02142 MGS-like domain KM388_RS01660 PF01808 AICARFT/IMPCHase bienzyme KM388_RS01665 PF02844 Phosphoribosylglycinamide synthetase, N domain KM388_RS01665 PF02843 Phosphoribosylglycinamide synthetase, C domain KM388_RS01665 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM388_RS01685 PF01884 PcrB family KM388_RS01690 PF00580 UvrD/REP helicase N-terminal domain KM388_RS01690 PF13361 UvrD-like helicase C-terminal domain KM388_RS01695 PF00533 BRCA1 C Terminus (BRCT) domain KM388_RS01695 PF01653 NAD-dependent DNA ligase adenylation domain KM388_RS01695 PF03120 NAD-dependent DNA ligase OB-fold domain KM388_RS01695 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM388_RS01695 PF12826 Helix-hairpin-helix motif KM388_RS01700 PF07537 CamS sex pheromone cAM373 precursor KM388_RS01705 PF01925 Sulfite exporter TauE/SafE KM388_RS01710 PF00171 Aldehyde dehydrogenase family KM388_RS01720 PF00857 Isochorismatase family KM388_RS01725 PF09383 NIL domain KM388_RS01725 PF00005 ABC transporter KM388_RS01730 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS01735 PF03180 NLPA lipoprotein KM388_RS01760 PF01047 MarR family KM388_RS01770 PF02686 Glu-tRNAGln amidotransferase C subunit KM388_RS01775 PF01425 Amidase KM388_RS01780 PF02934 GatB/GatE catalytic domain KM388_RS01780 PF02637 GatB domain KM388_RS01785 PF00781 Diacylglycerol kinase catalytic domain KM388_RS01790 PF13419 Haloacid dehalogenase-like hydrolase KM388_RS01795 PF00202 Aminotransferase class-III KM388_RS01800 PF00158 Sigma-54 interaction domain KM388_RS01805 PF00171 Aldehyde dehydrogenase family KM388_RS01810 PF00893 Small Multidrug Resistance protein KM388_RS01815 PF02073 Thermophilic metalloprotease (M29) KM388_RS01830 PF01773 Na+ dependent nucleoside transporter N-terminus KM388_RS01830 PF07662 Na+ dependent nucleoside transporter C-terminus KM388_RS01830 PF07670 Nucleoside recognition KM388_RS01835 PF01938 TRAM domain KM388_RS01835 PF05958 tRNA (Uracil-5-)-methyltransferase KM388_RS01835 PF02475 Met-10+ like-protein KM388_RS01840 PF01207 Dihydrouridine synthase (Dus) KM388_RS01850 PF07308 Protein of unknown function (DUF1456) KM388_RS01865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM388_RS01865 PF13378 Enolase C-terminal domain-like KM388_RS01875 PF03553 Na+/H+ antiporter family KM388_RS01880 PF01546 Peptidase family M20/M25/M40 KM388_RS01880 PF07687 Peptidase dimerisation domain KM388_RS01890 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS01890 PF13192 Thioredoxin domain KM388_RS01895 PF00578 AhpC/TSA family KM388_RS01900 PF01636 Phosphotransferase enzyme family KM388_RS01905 PF01008 Initiation factor 2 subunit family KM388_RS01910 PF00596 Class II Aldolase and Adducin N-terminal domain KM388_RS01915 PF01032 FecCD transport family KM388_RS01920 PF01032 FecCD transport family KM388_RS01925 PF01497 Periplasmic binding protein KM388_RS01930 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS01940 PF12728 Helix-turn-helix domain KM388_RS01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS01975 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS01975 PF00989 PAS fold KM388_RS01975 PF13188 PAS domain KM388_RS01975 PF13426 PAS domain KM388_RS01995 PF10127 RNA repair pathway DNA polymerase beta family KM388_RS02000 PF07690 Major Facilitator Superfamily KM388_RS02005 PF00355 Rieske [2Fe-2S] domain KM388_RS02005 PF01266 FAD dependent oxidoreductase KM388_RS02015 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS02020 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM388_RS02025 PF00005 ABC transporter KM388_RS02030 PF12729 Four helix bundle sensory module for signal transduction KM388_RS02030 PF00672 HAMP domain KM388_RS02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS02035 PF12729 Four helix bundle sensory module for signal transduction KM388_RS02035 PF00672 HAMP domain KM388_RS02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS02040 PF00128 Alpha amylase, catalytic domain KM388_RS02040 PF16657 Maltogenic Amylase, C-terminal domain KM388_RS02045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM388_RS02045 PF00367 phosphotransferase system, EIIB KM388_RS02045 PF02378 Phosphotransferase system, EIIC KM388_RS02050 PF03372 Endonuclease/Exonuclease/phosphatase family KM388_RS02055 PF01061 ABC-2 type transporter KM388_RS02060 PF01751 Toprim domain KM388_RS02060 PF01131 DNA topoisomerase KM388_RS02065 PF02110 Hydroxyethylthiazole kinase family KM388_RS02070 PF02581 Thiamine monophosphate synthase KM388_RS02075 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM388_RS02080 PF00672 HAMP domain KM388_RS02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS02085 PF01910 Thiamine-binding protein KM388_RS02090 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS02100 PF00005 ABC transporter KM388_RS02105 PF00005 ABC transporter KM388_RS02105 PF12848 ABC transporter KM388_RS02130 PF00440 Bacterial regulatory proteins, tetR family KM388_RS02130 PF08360 QacR-like protein, C-terminal region KM388_RS02150 PF11700 Vacuole effluxer Atg22 like KM388_RS02165 PF03129 Anticodon binding domain KM388_RS02165 PF09180 Prolyl-tRNA synthetase, C-terminal KM388_RS02165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM388_RS02175 PF00480 ROK family KM388_RS02180 PF02342 TerD domain KM388_RS02185 PF02342 TerD domain KM388_RS02190 PF02342 TerD domain KM388_RS02195 PF03741 Integral membrane protein TerC family KM388_RS02200 PF14266 Putative component of 'biosynthetic module' KM388_RS02205 PF05816 Toxic anion resistance protein (TelA) KM388_RS02210 PF00689 Cation transporting ATPase, C-terminus KM388_RS02210 PF00690 Cation transporter/ATPase, N-terminus KM388_RS02215 PF06569 Protein of unknown function (DUF1128) KM388_RS02220 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM388_RS02230 PF03631 Virulence factor BrkB KM388_RS02240 PF00892 EamA-like transporter family KM388_RS02260 PF09335 SNARE associated Golgi protein KM388_RS02275 PF16242 Pyridoxamine 5'-phosphate oxidase like KM388_RS02280 PF01699 Sodium/calcium exchanger protein KM388_RS02285 PF14167 YfkD-like protein KM388_RS02290 PF08756 YfkB-like domain KM388_RS02290 PF04055 Radical SAM superfamily KM388_RS02300 PF05683 Fumarase C-terminus KM388_RS02300 PF05681 Fumarate hydratase (Fumerase) KM388_RS02305 PF01522 Polysaccharide deacetylase KM388_RS02315 PF05958 tRNA (Uracil-5-)-methyltransferase KM388_RS02315 PF01938 TRAM domain KM388_RS02320 PF14659 Phage integrase, N-terminal SAM-like domain KM388_RS02320 PF00589 Phage integrase family KM388_RS02330 PF01381 Helix-turn-helix KM388_RS02345 PF01381 Helix-turn-helix KM388_RS02380 PF01695 IstB-like ATP binding protein KM388_RS02380 PF07319 Primosomal protein DnaI N-terminus KM388_RS02600 PF01183 Glycosyl hydrolases family 25 KM388_RS02610 PF01416 tRNA pseudouridine synthase KM388_RS02620 PF00158 Sigma-54 interaction domain KM388_RS02620 PF13426 PAS domain KM388_RS02620 PF02954 Bacterial regulatory protein, Fis family KM388_RS02630 PF00324 Amino acid permease KM388_RS02635 PF07687 Peptidase dimerisation domain KM388_RS02635 PF01546 Peptidase family M20/M25/M40 KM388_RS02660 PF04960 Glutaminase KM388_RS02665 PF02378 Phosphotransferase system, EIIC KM388_RS02665 PF00367 phosphotransferase system, EIIB KM388_RS02670 PF00144 Beta-lactamase KM388_RS02685 PF00535 Glycosyl transferase family 2 KM388_RS02695 PF01370 NAD dependent epimerase/dehydratase family KM388_RS02695 PF02911 Formyl transferase, C-terminal domain KM388_RS02695 PF00551 Formyl transferase KM388_RS02700 PF00535 Glycosyl transferase family 2 KM388_RS02705 PF01228 Glycine radical KM388_RS02705 PF02901 Pyruvate formate lyase-like KM388_RS02710 PF04055 Radical SAM superfamily KM388_RS02715 PF04101 Glycosyltransferase family 28 C-terminal domain KM388_RS02715 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM388_RS02730 PF01979 Amidohydrolase family KM388_RS02735 PF08338 Domain of unknown function (DUF1731) KM388_RS02735 PF01370 NAD dependent epimerase/dehydratase family KM388_RS02740 PF02631 RecX family KM388_RS02755 PF08176 Small acid-soluble spore protein K family KM388_RS02760 PF14043 WVELL protein KM388_RS02765 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM388_RS02770 PF00730 HhH-GPD superfamily base excision DNA repair protein KM388_RS02770 PF14815 NUDIX domain KM388_RS02780 PF04259 Small, acid-soluble spore protein, gamma-type KM388_RS02785 PF14182 YgaB-like protein KM388_RS02790 PF04167 Protein of unknown function (DUF402) KM388_RS02795 PF00664 ABC transporter transmembrane region KM388_RS02795 PF00005 ABC transporter KM388_RS02800 PF06081 Aromatic acid exporter family member 1 KM388_RS02805 PF00310 Glutamine amidotransferases class-II KM388_RS02805 PF04898 Glutamate synthase central domain KM388_RS02805 PF01645 Conserved region in glutamate synthase KM388_RS02805 PF01493 GXGXG motif KM388_RS02810 PF00202 Aminotransferase class-III KM388_RS02815 PF00005 ABC transporter KM388_RS02830 PF07885 Ion channel KM388_RS02835 PF00578 AhpC/TSA family KM388_RS02840 PF01475 Ferric uptake regulator family KM388_RS02845 PF11023 Zinc-ribbon containing domain KM388_RS02945 PF01709 Transcriptional regulator KM388_RS02950 PF13344 Haloacid dehalogenase-like hydrolase KM388_RS02950 PF00293 NUDIX domain KM388_RS02955 PF00912 Transglycosylase KM388_RS02955 PF00905 Penicillin binding protein transpeptidase domain KM388_RS02960 PF13462 Thioredoxin KM388_RS02970 PF08331 Domain of unknown function (DUF1730) KM388_RS02975 PF12671 Putative amidase domain KM388_RS02980 PF00588 SpoU rRNA Methylase family KM388_RS02985 PF00563 EAL domain KM388_RS02985 PF03707 Bacterial signalling protein N terminal repeat KM388_RS02985 PF00990 Diguanylate cyclase, GGDEF domain KM388_RS02990 PF08298 PrkA AAA domain KM388_RS02990 PF06798 PrkA serine protein kinase C-terminal domain KM388_RS02995 PF04285 Protein of unknown function (DUF444) KM388_RS03010 PF02028 BCCT, betaine/carnitine/choline family transporter KM388_RS03015 PF18496 Collagenase G catalytic helper subdomain KM388_RS03015 PF01752 Collagenase KM388_RS03015 PF08453 Peptidase family M9 N-terminal KM388_RS03025 PF15975 Flotillin KM388_RS03025 PF01145 SPFH domain / Band 7 family KM388_RS03030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS03030 PF02743 Cache domain KM388_RS03030 PF00672 HAMP domain KM388_RS03035 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM388_RS03035 PF17203 Single cache domain 3 KM388_RS03035 PF00989 PAS fold KM388_RS03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS03040 PF00072 Response regulator receiver domain KM388_RS03040 PF08279 HTH domain KM388_RS03040 PF12431 Transcriptional regulator KM388_RS03045 PF03600 Citrate transporter KM388_RS03065 PF04309 Glycerol-3-phosphate responsive antiterminator KM388_RS03070 PF00005 ABC transporter KM388_RS03070 PF17912 MalK OB fold domain KM388_RS03075 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS03080 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS03090 PF00149 Calcineurin-like phosphoesterase KM388_RS03095 PF00072 Response regulator receiver domain KM388_RS03095 PF00486 Transcriptional regulatory protein, C terminal KM388_RS03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS03100 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS03110 PF13529 Peptidase_C39 like family KM388_RS03115 PF02743 Cache domain KM388_RS03115 PF00672 HAMP domain KM388_RS03115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS03120 PF00989 PAS fold KM388_RS03120 PF17203 Single cache domain 3 KM388_RS03120 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM388_RS03125 PF00072 Response regulator receiver domain KM388_RS03130 PF03390 2-hydroxycarboxylate transporter family KM388_RS03135 PF00390 Malic enzyme, N-terminal domain KM388_RS03135 PF03949 Malic enzyme, NAD binding domain KM388_RS03145 PF00892 EamA-like transporter family KM388_RS03150 PF00155 Aminotransferase class I and II KM388_RS03150 PF00392 Bacterial regulatory proteins, gntR family KM388_RS03160 PF18698 Histidine kinase sensor domain KM388_RS03160 PF00989 PAS fold KM388_RS03160 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS03160 PF00672 HAMP domain KM388_RS03165 PF00072 Response regulator receiver domain KM388_RS03165 PF00486 Transcriptional regulatory protein, C terminal KM388_RS03170 PF00583 Acetyltransferase (GNAT) family KM388_RS03170 PF13508 Acetyltransferase (GNAT) domain KM388_RS03175 PF02634 FdhD/NarQ family KM388_RS03180 PF00037 4Fe-4S binding domain KM388_RS03180 PF00384 Molybdopterin oxidoreductase KM388_RS03180 PF01568 Molydopterin dinucleotide binding domain KM388_RS03180 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM388_RS03180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM388_RS03195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM388_RS03195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM388_RS03200 PF13520 Amino acid permease KM388_RS03205 PF01022 Bacterial regulatory protein, arsR family KM388_RS03210 PF00403 Heavy-metal-associated domain KM388_RS03215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM388_RS03215 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM388_RS03215 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM388_RS03230 PF03413 Peptidase propeptide and YPEB domain KM388_RS03230 PF01447 Thermolysin metallopeptidase, catalytic domain KM388_RS03230 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM388_RS03230 PF07504 Fungalysin/Thermolysin Propeptide Motif KM388_RS03250 PF04294 VanW like protein KM388_RS03255 PF03816 Cell envelope-related transcriptional attenuator domain KM388_RS03260 PF01773 Na+ dependent nucleoside transporter N-terminus KM388_RS03260 PF07662 Na+ dependent nucleoside transporter C-terminus KM388_RS03265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS03275 PF10415 Fumarase C C-terminus KM388_RS03275 PF00206 Lyase KM388_RS03280 PF02652 L-lactate permease KM388_RS03285 PF01022 Bacterial regulatory protein, arsR family KM388_RS03290 PF08141 Small acid-soluble spore protein H family KM388_RS03295 PF00854 POT family KM388_RS03300 PF01497 Periplasmic binding protein KM388_RS03305 PF01032 FecCD transport family KM388_RS03310 PF01032 FecCD transport family KM388_RS03315 PF00005 ABC transporter KM388_RS03320 PF08241 Methyltransferase domain KM388_RS03325 PF00155 Aminotransferase class I and II KM388_RS03330 PF01370 NAD dependent epimerase/dehydratase family KM388_RS03335 PF13344 Haloacid dehalogenase-like hydrolase KM388_RS03335 PF00293 NUDIX domain KM388_RS03340 PF00092 von Willebrand factor type A domain KM388_RS03345 PF07728 AAA domain (dynein-related subfamily) KM388_RS03350 PF13091 PLD-like domain KM388_RS03350 PF13396 Phospholipase_D-nuclease N-terminal KM388_RS03365 PF03707 Bacterial signalling protein N terminal repeat KM388_RS03365 PF00563 EAL domain KM388_RS03365 PF00990 Diguanylate cyclase, GGDEF domain KM388_RS03370 PF13520 Amino acid permease KM388_RS03375 PF00392 Bacterial regulatory proteins, gntR family KM388_RS03375 PF07702 UTRA domain KM388_RS03380 PF00367 phosphotransferase system, EIIB KM388_RS03380 PF02378 Phosphotransferase system, EIIC KM388_RS03385 PF00128 Alpha amylase, catalytic domain KM388_RS03385 PF16657 Maltogenic Amylase, C-terminal domain KM388_RS03400 PF03323 Bacillus/Clostridium GerA spore germination protein KM388_RS03410 PF01636 Phosphotransferase enzyme family KM388_RS03415 PF01235 Sodium:alanine symporter family KM388_RS03420 PF00005 ABC transporter KM388_RS03425 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM388_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS03440 PF00324 Amino acid permease KM388_RS03465 PF13280 WYL domain KM388_RS03465 PF08279 HTH domain KM388_RS03470 PF01872 RibD C-terminal domain KM388_RS03475 PF00989 PAS fold KM388_RS03475 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS03475 PF18698 Histidine kinase sensor domain KM388_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS03475 PF00672 HAMP domain KM388_RS03480 PF00072 Response regulator receiver domain KM388_RS03480 PF00486 Transcriptional regulatory protein, C terminal KM388_RS03490 PF01740 STAS domain KM388_RS03490 PF00916 Sulfate permease family KM388_RS03495 PF00582 Universal stress protein family KM388_RS03505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS03510 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS03515 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS03520 PF00005 ABC transporter KM388_RS03520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS03525 PF00005 ABC transporter KM388_RS03525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS03530 PF07690 Major Facilitator Superfamily KM388_RS03535 PF01047 MarR family KM388_RS03545 PF00356 Bacterial regulatory proteins, lacI family KM388_RS03550 PF00294 pfkB family carbohydrate kinase KM388_RS03555 PF05025 RbsD / FucU transport protein family KM388_RS03560 PF00005 ABC transporter KM388_RS03565 PF02653 Branched-chain amino acid transport system / permease component KM388_RS03570 PF13407 Periplasmic binding protein domain KM388_RS03575 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM388_RS03580 PF05547 Immune inhibitor A peptidase M6 KM388_RS03595 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS03595 PF00107 Zinc-binding dehydrogenase KM388_RS03605 PF00882 Zinc dependent phospholipase C KM388_RS03610 PF03372 Endonuclease/Exonuclease/phosphatase family KM388_RS03635 PF02673 Bacitracin resistance protein BacA KM388_RS03640 PF02743 Cache domain KM388_RS03640 PF00672 HAMP domain KM388_RS03640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS03645 PF01476 LysM domain KM388_RS03645 PF06725 3D domain KM388_RS03650 PF01381 Helix-turn-helix KM388_RS03660 PF04203 Sortase domain KM388_RS03665 PF00854 POT family KM388_RS03670 PF05525 Branched-chain amino acid transport protein KM388_RS03685 PF00324 Amino acid permease KM388_RS03690 PF00860 Permease family KM388_RS03715 PF02254 TrkA-N domain KM388_RS03715 PF02080 TrkA-C domain KM388_RS03715 PF00999 Sodium/hydrogen exchanger family KM388_RS03725 PF00510 Cytochrome c oxidase subunit III KM388_RS03730 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM388_RS03735 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM388_RS03740 PF13529 Peptidase_C39 like family KM388_RS03745 PF07687 Peptidase dimerisation domain KM388_RS03745 PF01546 Peptidase family M20/M25/M40 KM388_RS03750 PF11755 Protein of unknown function (DUF3311) KM388_RS03755 PF00474 Sodium:solute symporter family KM388_RS03760 PF03323 Bacillus/Clostridium GerA spore germination protein KM388_RS03765 PF03845 Spore germination protein KM388_RS03770 PF05504 Spore germination B3/ GerAC like, C-terminal KM388_RS03775 PF07664 Ferrous iron transport protein B C terminus KM388_RS03775 PF07670 Nucleoside recognition KM388_RS03775 PF02421 Ferrous iron transport protein B KM388_RS03775 PF17910 FeoB cytosolic helical domain KM388_RS03780 PF07664 Ferrous iron transport protein B C terminus KM388_RS03780 PF17910 FeoB cytosolic helical domain KM388_RS03780 PF07670 Nucleoside recognition KM388_RS03780 PF02421 Ferrous iron transport protein B KM388_RS03785 PF07670 Nucleoside recognition KM388_RS03785 PF07664 Ferrous iron transport protein B C terminus KM388_RS03785 PF04023 FeoA domain KM388_RS03785 PF02421 Ferrous iron transport protein B KM388_RS03785 PF17910 FeoB cytosolic helical domain KM388_RS03790 PF12849 PBP superfamily domain KM388_RS03795 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS03800 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS03810 PF00873 AcrB/AcrD/AcrF family KM388_RS03930 PF00571 CBS domain KM388_RS03945 PF00246 Zinc carboxypeptidase KM388_RS03945 PF08239 Bacterial SH3 domain KM388_RS03950 PF03070 TENA/THI-4/PQQC family KM388_RS03955 PF00005 ABC transporter KM388_RS03960 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS03965 PF09084 NMT1/THI5 like KM388_RS03970 PF02581 Thiamine monophosphate synthase KM388_RS03975 PF01266 FAD dependent oxidoreductase KM388_RS03980 PF02597 ThiS family KM388_RS03985 PF05690 Thiazole biosynthesis protein ThiG KM388_RS03990 PF00899 ThiF family KM388_RS03995 PF08543 Phosphomethylpyrimidine kinase KM388_RS04020 PF03814 Potassium-transporting ATPase A subunit KM388_RS04030 PF02669 K+-transporting ATPase, c chain KM388_RS04035 PF02702 Osmosensitive K+ channel His kinase sensor domain KM388_RS04040 PF07690 Major Facilitator Superfamily KM388_RS04045 PF01047 MarR family KM388_RS04060 PF00860 Permease family KM388_RS04070 PF03734 L,D-transpeptidase catalytic domain KM388_RS04070 PF17969 L,D-transpeptidase C-terminal domain KM388_RS04080 PF00294 pfkB family carbohydrate kinase KM388_RS04085 PF08244 Glycosyl hydrolases family 32 C terminal KM388_RS04085 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM388_RS04090 PF02378 Phosphotransferase system, EIIC KM388_RS04090 PF00367 phosphotransferase system, EIIB KM388_RS04095 PF13407 Periplasmic binding protein domain KM388_RS04095 PF00356 Bacterial regulatory proteins, lacI family KM388_RS04105 PF00085 Thioredoxin KM388_RS04110 PF02600 Disulfide bond formation protein DsbB KM388_RS04115 PF14148 YhdB-like protein KM388_RS04135 PF03323 Bacillus/Clostridium GerA spore germination protein KM388_RS04145 PF00881 Nitroreductase family KM388_RS04150 PF04293 SpoVR like protein KM388_RS04175 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS04175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM388_RS04180 PF02583 Metal-sensitive transcriptional repressor KM388_RS04185 PF00581 Rhodanese-like domain KM388_RS04185 PF01206 Sulfurtransferase TusA KM388_RS04190 PF00753 Metallo-beta-lactamase superfamily KM388_RS04190 PF00581 Rhodanese-like domain KM388_RS04195 PF01206 Sulfurtransferase TusA KM388_RS04210 PF13686 DsrE/DsrF/DrsH-like family KM388_RS04215 PF01925 Sulfite exporter TauE/SafE KM388_RS04225 PF03816 Cell envelope-related transcriptional attenuator domain KM388_RS04230 PF00107 Zinc-binding dehydrogenase KM388_RS04230 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS04235 PF02690 Na+/Pi-cotransporter KM388_RS04240 PF07690 Major Facilitator Superfamily KM388_RS04250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM388_RS04250 PF05043 Mga helix-turn-helix domain KM388_RS04250 PF08279 HTH domain KM388_RS04250 PF00874 PRD domain KM388_RS04255 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM388_RS04260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM388_RS04265 PF02378 Phosphotransferase system, EIIC KM388_RS04280 PF01476 LysM domain KM388_RS04280 PF06725 3D domain KM388_RS04285 PF02687 FtsX-like permease family KM388_RS04285 PF12704 MacB-like periplasmic core domain KM388_RS04290 PF00005 ABC transporter KM388_RS04300 PF09529 Integral membrane protein (intg_mem_TP0381) KM388_RS04315 PF05525 Branched-chain amino acid transport protein KM388_RS04320 PF05067 Manganese containing catalase KM388_RS04325 PF12652 CotJB protein KM388_RS04330 PF11007 Spore coat associated protein JA (CotJA) KM388_RS04345 PF02735 Ku70/Ku80 beta-barrel domain KM388_RS04355 PF09335 SNARE associated Golgi protein KM388_RS04395 PF13520 Amino acid permease KM388_RS04400 PF00999 Sodium/hydrogen exchanger family KM388_RS04410 PF01418 Helix-turn-helix domain, rpiR family KM388_RS04410 PF01380 SIS domain KM388_RS04415 PF01380 SIS domain KM388_RS04420 PF00367 phosphotransferase system, EIIB KM388_RS04420 PF02378 Phosphotransferase system, EIIC KM388_RS04430 PF07681 DoxX KM388_RS04445 PF00892 EamA-like transporter family KM388_RS04450 PF01037 Lrp/AsnC ligand binding domain KM388_RS04460 PF00893 Small Multidrug Resistance protein KM388_RS04465 PF00893 Small Multidrug Resistance protein KM388_RS04470 PF17934 Tetracyclin repressor-like, C-terminal domain KM388_RS04470 PF00440 Bacterial regulatory proteins, tetR family KM388_RS04475 PF07690 Major Facilitator Superfamily KM388_RS04480 PF01638 HxlR-like helix-turn-helix KM388_RS04490 PF02525 Flavodoxin-like fold KM388_RS04495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS04495 PF12793 Sugar transport-related sRNA regulator N-term KM388_RS04500 PF07690 Major Facilitator Superfamily KM388_RS04510 PF01965 DJ-1/PfpI family KM388_RS04515 PF06628 Catalase-related immune-responsive KM388_RS04515 PF18011 C-terminal domain found in long catalases KM388_RS04515 PF00199 Catalase KM388_RS04525 PF13520 Amino acid permease KM388_RS04530 PF01177 Asp/Glu/Hydantoin racemase KM388_RS04540 PF00171 Aldehyde dehydrogenase family KM388_RS04545 PF00664 ABC transporter transmembrane region KM388_RS04545 PF00005 ABC transporter KM388_RS04555 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM388_RS04560 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS04565 PF00005 ABC transporter KM388_RS04570 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM388_RS04580 PF14398 YheC/D like ATP-grasp KM388_RS04590 PF04286 Protein of unknown function (DUF445) KM388_RS04595 PF06133 Control of competence regulator ComK, YlbF/YmcA KM388_RS04610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM388_RS04610 PF00205 Thiamine pyrophosphate enzyme, central domain KM388_RS04610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM388_RS04615 PF03306 Alpha-acetolactate decarboxylase KM388_RS04625 PF02245 Methylpurine-DNA glycosylase (MPG) KM388_RS04645 PF04055 Radical SAM superfamily KM388_RS04650 PF00501 AMP-binding enzyme KM388_RS04650 PF13193 AMP-binding enzyme C-terminal domain KM388_RS04660 PF01740 STAS domain KM388_RS04660 PF00916 Sulfate permease family KM388_RS04680 PF07517 SecA DEAD-like domain KM388_RS04680 PF01043 SecA preprotein cross-linking domain KM388_RS04680 PF07516 SecA Wing and Scaffold domain KM388_RS04685 PF14667 Polysaccharide biosynthesis C-terminal domain KM388_RS04685 PF01943 Polysaccharide biosynthesis protein KM388_RS04695 PF02368 Bacterial Ig-like domain (group 2) KM388_RS04695 PF13205 Bacterial Ig-like domain KM388_RS04695 PF00395 S-layer homology domain KM388_RS04700 PF00395 S-layer homology domain KM388_RS04710 PF03062 MBOAT, membrane-bound O-acyltransferase family KM388_RS04715 PF03062 MBOAT, membrane-bound O-acyltransferase family KM388_RS04730 PF00378 Enoyl-CoA hydratase/isomerase KM388_RS04745 PF05343 M42 glutamyl aminopeptidase KM388_RS04750 PF01520 N-acetylmuramoyl-L-alanine amidase KM388_RS04750 PF00395 S-layer homology domain KM388_RS04760 PF11121 Protein of unknown function (DUF2639) KM388_RS04765 PF05544 Proline racemase KM388_RS04770 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM388_RS04800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS04805 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS04810 PF12911 N-terminal TM domain of oligopeptide transport permease C KM388_RS04810 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS04820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS04820 PF00005 ABC transporter KM388_RS04855 PF00083 Sugar (and other) transporter KM388_RS04860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS04860 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM388_RS04865 PF12431 Transcriptional regulator KM388_RS04865 PF08279 HTH domain KM388_RS04865 PF00072 Response regulator receiver domain KM388_RS04870 PF03401 Tripartite tricarboxylate transporter family receptor KM388_RS04875 PF02342 TerD domain KM388_RS04900 PF06445 GyrI-like small molecule binding domain KM388_RS04900 PF13411 MerR HTH family regulatory protein KM388_RS04915 PF03796 DnaB-like helicase C terminal domain KM388_RS04915 PF00772 DnaB-like helicase N terminal domain KM388_RS04940 PF01925 Sulfite exporter TauE/SafE KM388_RS04955 PF07690 Major Facilitator Superfamily KM388_RS05005 PF18665 Tetracyclin repressor-like, C-terminal domain KM388_RS05005 PF00440 Bacterial regulatory proteins, tetR family KM388_RS05025 PF01066 CDP-alcohol phosphatidyltransferase KM388_RS05045 PF02733 Dak1 domain KM388_RS05055 PF02733 Dak1 domain KM388_RS05060 PF02525 Flavodoxin-like fold KM388_RS05065 PF02082 Transcriptional regulator KM388_RS05095 PF01966 HD domain KM388_RS05095 PF00672 HAMP domain KM388_RS05115 PF00395 S-layer homology domain KM388_RS05140 PF11181 Heat induced stress protein YflT KM388_RS05145 PF05532 CsbD-like KM388_RS05160 PF01740 STAS domain KM388_RS05165 PF13581 Histidine kinase-like ATPase domain KM388_RS05170 PF04542 Sigma-70 region 2 KM388_RS05170 PF04545 Sigma-70, region 4 KM388_RS05170 PF04539 Sigma-70 region 3 KM388_RS05180 PF07228 Stage II sporulation protein E (SpoIIE) KM388_RS05180 PF13426 PAS domain KM388_RS05185 PF03705 CheR methyltransferase, all-alpha domain KM388_RS05185 PF01739 CheR methyltransferase, SAM binding domain KM388_RS05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS05190 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS05190 PF01627 Hpt domain KM388_RS05190 PF00072 Response regulator receiver domain KM388_RS05190 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM388_RS05215 PF01906 Putative heavy-metal-binding KM388_RS05225 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS05225 PF00107 Zinc-binding dehydrogenase KM388_RS05230 PF11121 Protein of unknown function (DUF2639) KM388_RS05245 PF00149 Calcineurin-like phosphoesterase KM388_RS05255 PF12323 Helix-turn-helix domain KM388_RS05255 PF01385 Probable transposase KM388_RS05255 PF07282 Putative transposase DNA-binding domain KM388_RS05265 PF01336 OB-fold nucleic acid binding domain KM388_RS05265 PF01966 HD domain KM388_RS05270 PF00440 Bacterial regulatory proteins, tetR family KM388_RS05275 PF07690 Major Facilitator Superfamily KM388_RS05280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS05285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS05290 PF18801 response regulator aspartate phosphatase H, N terminal KM388_RS05295 PF00561 alpha/beta hydrolase fold KM388_RS05295 PF08386 TAP-like protein KM388_RS05315 PF04309 Glycerol-3-phosphate responsive antiterminator KM388_RS05320 PF00230 Major intrinsic protein KM388_RS05325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM388_RS05325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM388_RS05330 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM388_RS05330 PF01266 FAD dependent oxidoreductase KM388_RS05345 PF04542 Sigma-70 region 2 KM388_RS05345 PF08281 Sigma-70, region 4 KM388_RS05370 PF07690 Major Facilitator Superfamily KM388_RS05375 PF07690 Major Facilitator Superfamily KM388_RS05385 PF13538 UvrD-like helicase C-terminal domain KM388_RS05405 PF01047 MarR family KM388_RS05410 PF12732 YtxH-like protein KM388_RS05415 PF01230 HIT domain KM388_RS05420 PF00005 ABC transporter KM388_RS05425 PF05975 Bacterial ABC transporter protein EcsB KM388_RS05430 PF12787 EcsC protein family KM388_RS05440 PF17934 Tetracyclin repressor-like, C-terminal domain KM388_RS05440 PF00440 Bacterial regulatory proteins, tetR family KM388_RS05450 PF03703 Bacterial PH domain KM388_RS05495 PF03703 Bacterial PH domain KM388_RS05500 PF03703 Bacterial PH domain KM388_RS05505 PF03992 Antibiotic biosynthesis monooxygenase KM388_RS05510 PF00912 Transglycosylase KM388_RS05510 PF00905 Penicillin binding protein transpeptidase domain KM388_RS05515 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM388_RS05520 PF00762 Ferrochelatase KM388_RS05525 PF01593 Flavin containing amine oxidoreductase KM388_RS05550 PF03965 Penicillinase repressor KM388_RS05560 PF17932 Tetracyclin repressor-like, C-terminal domain KM388_RS05560 PF00440 Bacterial regulatory proteins, tetR family KM388_RS05590 PF00356 Bacterial regulatory proteins, lacI family KM388_RS05595 PF14149 YhfH-like protein KM388_RS05600 PF12706 Beta-lactamase superfamily domain KM388_RS05605 PF03099 Biotin/lipoate A/B protein ligase family KM388_RS05605 PF10437 Bacterial lipoate protein ligase C-terminus KM388_RS05615 PF00501 AMP-binding enzyme KM388_RS05615 PF13193 AMP-binding enzyme C-terminal domain KM388_RS05625 PF01520 N-acetylmuramoyl-L-alanine amidase KM388_RS05625 PF00395 S-layer homology domain KM388_RS05630 PF05593 RHS Repeat KM388_RS05645 PF05593 RHS Repeat KM388_RS05685 PF01966 HD domain KM388_RS05695 PF08281 Sigma-70, region 4 KM388_RS05695 PF04542 Sigma-70 region 2 KM388_RS05700 PF06445 GyrI-like small molecule binding domain KM388_RS05700 PF12833 Helix-turn-helix domain KM388_RS05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS05715 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS05720 PF00072 Response regulator receiver domain KM388_RS05720 PF00486 Transcriptional regulatory protein, C terminal KM388_RS05745 PF01435 Peptidase family M48 KM388_RS05745 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM388_RS05750 PF02743 Cache domain KM388_RS05750 PF00672 HAMP domain KM388_RS05750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS05755 PF00892 EamA-like transporter family KM388_RS05760 PF00395 S-layer homology domain KM388_RS05760 PF03424 Carbohydrate binding domain (family 17/28) KM388_RS05760 PF00150 Cellulase (glycosyl hydrolase family 5) KM388_RS05770 PF00395 S-layer homology domain KM388_RS05775 PF01274 Malate synthase KM388_RS05780 PF00463 Isocitrate lyase family KM388_RS05790 PF00313 'Cold-shock' DNA-binding domain KM388_RS05805 PF06338 ComK protein KM388_RS05810 PF09335 SNARE associated Golgi protein KM388_RS05815 PF10502 Signal peptidase, peptidase S26 KM388_RS05820 PF12705 PD-(D/E)XK nuclease superfamily KM388_RS05820 PF13361 UvrD-like helicase C-terminal domain KM388_RS05825 PF13361 UvrD-like helicase C-terminal domain KM388_RS05825 PF12705 PD-(D/E)XK nuclease superfamily KM388_RS05825 PF00580 UvrD/REP helicase N-terminal domain KM388_RS05835 PF10676 Spore germination protein gerPA/gerPF KM388_RS05840 PF10970 Spore germination protein GerPE KM388_RS05850 PF10737 Spore germination protein GerPC KM388_RS05855 PF10803 Spore germination GerPB KM388_RS05860 PF10676 Spore germination protein gerPA/gerPF KM388_RS05870 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM388_RS05880 PF00202 Aminotransferase class-III KM388_RS05885 PF07457 Protein of unknown function (DUF1516) KM388_RS05895 PF13537 Glutamine amidotransferase domain KM388_RS05895 PF00733 Asparagine synthase KM388_RS05900 PF00762 Ferrochelatase KM388_RS05905 PF06628 Catalase-related immune-responsive KM388_RS05905 PF00199 Catalase KM388_RS05910 PF00909 Ammonium Transporter Family KM388_RS05915 PF00128 Alpha amylase, catalytic domain KM388_RS05925 PF04461 Protein of unknown function (DUF520) KM388_RS05930 PF13509 S1 domain KM388_RS05930 PF17783 CvfB-like winged helix domain KM388_RS05940 PF00639 PPIC-type PPIASE domain KM388_RS05950 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS05950 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM388_RS05955 PF12758 Protein of unknown function (DUF3813) KM388_RS05970 PF14168 YjzC-like protein KM388_RS05975 PF10431 C-terminal, D2-small domain, of ClpB protein KM388_RS05975 PF17871 AAA lid domain KM388_RS05975 PF07724 AAA domain (Cdc48 subfamily) KM388_RS05975 PF00004 ATPase family associated with various cellular activities (AAA) KM388_RS05975 PF02861 Clp amino terminal domain, pathogenicity island component KM388_RS05995 PF10815 ComZ KM388_RS06000 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM388_RS06000 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM388_RS06005 PF00109 Beta-ketoacyl synthase, N-terminal domain KM388_RS06005 PF02801 Beta-ketoacyl synthase, C-terminal domain KM388_RS06010 PF10026 Predicted Zn-dependent protease (DUF2268) KM388_RS06015 PF12227 Protein of unknown function (DUF3603) KM388_RS06020 PF00579 tRNA synthetases class I (W and Y) KM388_RS06030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS06035 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS06040 PF12911 N-terminal TM domain of oligopeptide transport permease C KM388_RS06040 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS06045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS06045 PF00005 ABC transporter KM388_RS06050 PF00005 ABC transporter KM388_RS06050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS06055 PF01554 MatE KM388_RS06060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS06070 PF03960 ArsC family KM388_RS06075 PF03741 Integral membrane protein TerC family KM388_RS06080 PF05389 Negative regulator of genetic competence (MecA) KM388_RS06085 PF13091 PLD-like domain KM388_RS06085 PF13396 Phospholipase_D-nuclease N-terminal KM388_RS06095 PF01432 Peptidase family M3 KM388_RS06095 PF08439 Oligopeptidase F KM388_RS06110 PF01152 Bacterial-like globin KM388_RS06115 PF01928 CYTH domain KM388_RS06125 PF04607 Region found in RelA / SpoT proteins KM388_RS06130 PF01513 ATP-NAD kinase KM388_RS06135 PF00849 RNA pseudouridylate synthase KM388_RS06145 PF00149 Calcineurin-like phosphoesterase KM388_RS06155 PF00535 Glycosyl transferase family 2 KM388_RS06160 PF08241 Methyltransferase domain KM388_RS06165 PF05711 Macrocin-O-methyltransferase (TylF) KM388_RS06175 PF00535 Glycosyl transferase family 2 KM388_RS06175 PF13181 Tetratricopeptide repeat KM388_RS06195 PF00483 Nucleotidyl transferase KM388_RS06200 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM388_RS06205 PF16363 GDP-mannose 4,6 dehydratase KM388_RS06210 PF04321 RmlD substrate binding domain KM388_RS06230 PF07098 Protein of unknown function (DUF1360) KM388_RS06250 PF00580 UvrD/REP helicase N-terminal domain KM388_RS06250 PF13361 UvrD-like helicase C-terminal domain KM388_RS06255 PF13673 Acetyltransferase (GNAT) domain KM388_RS06265 PF00756 Putative esterase KM388_RS06280 PF02368 Bacterial Ig-like domain (group 2) KM388_RS06285 PF00474 Sodium:solute symporter family KM388_RS06290 PF00425 chorismate binding enzyme KM388_RS06290 PF04715 Anthranilate synthase component I, N terminal region KM388_RS06295 PF00117 Glutamine amidotransferase class-I KM388_RS06295 PF02885 Glycosyl transferase family, helical bundle domain KM388_RS06295 PF00591 Glycosyl transferase family, a/b domain KM388_RS06300 PF00591 Glycosyl transferase family, a/b domain KM388_RS06300 PF02885 Glycosyl transferase family, helical bundle domain KM388_RS06305 PF00218 Indole-3-glycerol phosphate synthase KM388_RS06310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM388_RS06315 PF00291 Pyridoxal-phosphate dependent enzyme KM388_RS06330 PF02652 L-lactate permease KM388_RS06335 PF10042 Uncharacterized conserved protein (DUF2278) KM388_RS06360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM388_RS06360 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS06390 PF00364 Biotin-requiring enzyme KM388_RS06390 PF02817 e3 binding domain KM388_RS06390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM388_RS06395 PF00676 Dehydrogenase E1 component KM388_RS06395 PF16870 2-oxoglutarate dehydrogenase C-terminal KM388_RS06395 PF02779 Transketolase, pyrimidine binding domain KM388_RS06400 PF01381 Helix-turn-helix KM388_RS06460 PF13649 Methyltransferase domain KM388_RS06470 PF07943 Penicillin-binding protein 5, C-terminal domain KM388_RS06470 PF00768 D-alanyl-D-alanine carboxypeptidase KM388_RS06480 PF12389 Camelysin metallo-endopeptidase KM388_RS06490 PF12389 Camelysin metallo-endopeptidase KM388_RS06495 PF01381 Helix-turn-helix KM388_RS06495 PF08671 Anti-repressor SinI KM388_RS06505 PF05547 Immune inhibitor A peptidase M6 KM388_RS06510 PF00171 Aldehyde dehydrogenase family KM388_RS06515 PF00005 ABC transporter KM388_RS06515 PF08402 TOBE domain KM388_RS06520 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS06525 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS06530 PF13416 Bacterial extracellular solute-binding protein KM388_RS06540 PF03176 MMPL family KM388_RS06550 PF01479 S4 domain KM388_RS06550 PF00849 RNA pseudouridylate synthase KM388_RS06560 PF00188 Cysteine-rich secretory protein family KM388_RS06565 PF13183 4Fe-4S dicluster domain KM388_RS06565 PF02754 Cysteine-rich domain KM388_RS06570 PF02913 FAD linked oxidases, C-terminal domain KM388_RS06570 PF01565 FAD binding domain KM388_RS06575 PF05651 Putative sugar diacid recognition KM388_RS06575 PF13556 PucR C-terminal helix-turn-helix domain KM388_RS06575 PF17853 GGDEF-like domain KM388_RS06585 PF00486 Transcriptional regulatory protein, C terminal KM388_RS06585 PF00072 Response regulator receiver domain KM388_RS06590 PF00672 HAMP domain KM388_RS06590 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS06590 PF18698 Histidine kinase sensor domain KM388_RS06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS06590 PF00989 PAS fold KM388_RS06595 PF00392 Bacterial regulatory proteins, gntR family KM388_RS06595 PF07729 FCD domain KM388_RS06600 PF02754 Cysteine-rich domain KM388_RS06605 PF13183 4Fe-4S dicluster domain KM388_RS06605 PF02589 LUD domain KM388_RS06605 PF11870 Domain of unknown function (DUF3390) KM388_RS06610 PF02589 LUD domain KM388_RS06615 PF06750 Bacterial Peptidase A24 N-terminal domain KM388_RS06615 PF01478 Type IV leader peptidase family KM388_RS06625 PF01226 Formate/nitrite transporter KM388_RS06630 PF03741 Integral membrane protein TerC family KM388_RS06640 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM388_RS06645 PF01575 MaoC like domain KM388_RS06670 PF00561 alpha/beta hydrolase fold KM388_RS06675 PF01266 FAD dependent oxidoreductase KM388_RS06680 PF02386 Cation transport protein KM388_RS06710 PF13419 Haloacid dehalogenase-like hydrolase KM388_RS06715 PF00266 Aminotransferase class-V KM388_RS06725 PF00455 DeoR C terminal sensor domain KM388_RS06725 PF08220 DeoR-like helix-turn-helix domain KM388_RS06745 PF04748 Divergent polysaccharide deacetylase KM388_RS06750 PF09388 Spo0E like sporulation regulatory protein KM388_RS06755 PF02743 Cache domain KM388_RS06755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS06755 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS06760 PF01047 MarR family KM388_RS06770 PF12867 DinB superfamily KM388_RS06780 PF00989 PAS fold KM388_RS06780 PF13426 PAS domain KM388_RS06780 PF13188 PAS domain KM388_RS06780 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS06785 PF06508 Queuosine biosynthesis protein QueC KM388_RS06790 PF01242 6-pyruvoyl tetrahydropterin synthase KM388_RS06795 PF04055 Radical SAM superfamily KM388_RS06800 PF14489 QueF-like protein KM388_RS06805 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM388_RS06835 PF07972 NrdI Flavodoxin like KM388_RS06855 PF00268 Ribonucleotide reductase, small chain KM388_RS06860 PF00392 Bacterial regulatory proteins, gntR family KM388_RS06865 PF00005 ABC transporter KM388_RS06875 PF00005 ABC transporter KM388_RS06895 PF01037 Lrp/AsnC ligand binding domain KM388_RS06905 PF00857 Isochorismatase family KM388_RS06915 PF02016 LD-carboxypeptidase N-terminal domain KM388_RS06915 PF17676 LD-carboxypeptidase C-terminal domain KM388_RS06920 PF03060 Nitronate monooxygenase KM388_RS06925 PF04914 DltD protein KM388_RS06930 PF00550 Phosphopantetheine attachment site KM388_RS06935 PF03062 MBOAT, membrane-bound O-acyltransferase family KM388_RS06940 PF13193 AMP-binding enzyme C-terminal domain KM388_RS06940 PF00501 AMP-binding enzyme KM388_RS06950 PF07687 Peptidase dimerisation domain KM388_RS06950 PF01546 Peptidase family M20/M25/M40 KM388_RS06960 PF00258 Flavodoxin KM388_RS06975 PF01636 Phosphotransferase enzyme family KM388_RS06995 PF01554 MatE KM388_RS07000 PF02673 Bacitracin resistance protein BacA KM388_RS07015 PF01047 MarR family KM388_RS07025 PF00375 Sodium:dicarboxylate symporter family KM388_RS07030 PF02386 Cation transport protein KM388_RS07040 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM388_RS07050 PF03698 Uncharacterised protein family (UPF0180) KM388_RS07060 PF01063 Amino-transferase class IV KM388_RS07065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM388_RS07065 PF00205 Thiamine pyrophosphate enzyme, central domain KM388_RS07065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM388_RS07070 PF10369 Small subunit of acetolactate synthase KM388_RS07070 PF01842 ACT domain KM388_RS07075 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM388_RS07075 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM388_RS07080 PF08502 LeuA allosteric (dimerisation) domain KM388_RS07080 PF00682 HMGL-like KM388_RS07085 PF00180 Isocitrate/isopropylmalate dehydrogenase KM388_RS07090 PF00330 Aconitase family (aconitate hydratase) KM388_RS07095 PF00694 Aconitase C-terminal domain KM388_RS07100 PF13393 Histidyl-tRNA synthetase KM388_RS07105 PF01634 ATP phosphoribosyltransferase KM388_RS07110 PF00815 Histidinol dehydrogenase KM388_RS07115 PF00475 Imidazoleglycerol-phosphate dehydratase KM388_RS07120 PF00117 Glutamine amidotransferase class-I KM388_RS07125 PF00977 Histidine biosynthesis protein KM388_RS07130 PF00977 Histidine biosynthesis protein KM388_RS07135 PF01502 Phosphoribosyl-AMP cyclohydrolase KM388_RS07140 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM388_RS07145 PF02811 PHP domain KM388_RS07155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM388_RS07155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM388_RS07160 PF01066 CDP-alcohol phosphatidyltransferase KM388_RS07165 PF00884 Sulfatase KM388_RS07175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM388_RS07175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM388_RS07185 PF01507 Phosphoadenosine phosphosulfate reductase family KM388_RS07190 PF01747 ATP-sulfurylase KM388_RS07190 PF14306 PUA-like domain KM388_RS07200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM388_RS07200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM388_RS07210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM388_RS07215 PF01903 CbiX KM388_RS07225 PF00209 Sodium:neurotransmitter symporter family KM388_RS07235 PF00375 Sodium:dicarboxylate symporter family KM388_RS07245 PF03553 Na+/H+ antiporter family KM388_RS07260 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM388_RS07265 PF00672 HAMP domain KM388_RS07265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS07265 PF07730 Histidine kinase KM388_RS07270 PF00196 Bacterial regulatory proteins, luxR family KM388_RS07270 PF00072 Response regulator receiver domain KM388_RS07280 PF05525 Branched-chain amino acid transport protein KM388_RS07290 PF08241 Methyltransferase domain KM388_RS07315 PF00175 Oxidoreductase NAD-binding domain KM388_RS07315 PF00042 Globin KM388_RS07315 PF00970 Oxidoreductase FAD-binding domain KM388_RS07330 PF01925 Sulfite exporter TauE/SafE KM388_RS07335 PF01384 Phosphate transporter family KM388_RS07340 PF01865 Protein of unknown function DUF47 KM388_RS07365 PF01904 Protein of unknown function DUF72 KM388_RS07375 PF00589 Phage integrase family KM388_RS07380 PF16736 Single Cache-like KM388_RS07380 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS07380 PF00989 PAS fold KM388_RS07380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS07385 PF01048 Phosphorylase superfamily KM388_RS07400 PF09924 Uncharacterised conserved protein (DUF2156) KM388_RS07400 PF03706 Lysylphosphatidylglycerol synthase TM region KM388_RS07415 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM388_RS07415 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM388_RS07420 PF00768 D-alanyl-D-alanine carboxypeptidase KM388_RS07420 PF07943 Penicillin-binding protein 5, C-terminal domain KM388_RS07425 PF07670 Nucleoside recognition KM388_RS07430 PF07670 Nucleoside recognition KM388_RS07435 PF00849 RNA pseudouridylate synthase KM388_RS07435 PF01479 S4 domain KM388_RS07440 PF00578 AhpC/TSA family KM388_RS07445 PF05140 ResB-like family KM388_RS07450 PF01578 Cytochrome C assembly protein KM388_RS07455 PF00486 Transcriptional regulatory protein, C terminal KM388_RS07455 PF00072 Response regulator receiver domain KM388_RS07460 PF00989 PAS fold KM388_RS07460 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS07460 PF18698 Histidine kinase sensor domain KM388_RS07460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS07460 PF00672 HAMP domain KM388_RS07465 PF01923 Cobalamin adenosyltransferase KM388_RS07480 PF12822 ECF transporter, substrate-specific component KM388_RS07490 PF14493 Helix-turn-helix domain KM388_RS07495 PF00270 DEAD/DEAH box helicase KM388_RS07495 PF00271 Helicase conserved C-terminal domain KM388_RS07500 PF02517 CPBP intramembrane metalloprotease KM388_RS07515 PF02310 B12 binding domain KM388_RS07515 PF02607 B12 binding domain KM388_RS07515 PF13411 MerR HTH family regulatory protein KM388_RS07520 PF05389 Negative regulator of genetic competence (MecA) KM388_RS07525 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM388_RS07525 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM388_RS07550 PF00710 Asparaginase, N-terminal KM388_RS07550 PF17763 Glutaminase/Asparaginase C-terminal domain KM388_RS07560 PF02224 Cytidylate kinase KM388_RS07565 PF00575 S1 RNA binding domain KM388_RS07570 PF01070 FMN-dependent dehydrogenase KM388_RS07575 PF14140 YpzI-like protein KM388_RS07585 PF14045 YIEGIA protein KM388_RS07595 PF01926 50S ribosome-binding GTPase KM388_RS07595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM388_RS07600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM388_RS07600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM388_RS07610 PF10966 Protein of unknown function (DUF2768) KM388_RS07620 PF09547 Stage IV sporulation protein A (spore_IV_A) KM388_RS07625 PF00216 Bacterial DNA-binding protein KM388_RS07630 PF01227 GTP cyclohydrolase I KM388_RS07635 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM388_RS07640 PF01209 ubiE/COQ5 methyltransferase family KM388_RS07645 PF00348 Polyprenyl synthetase KM388_RS07650 PF00334 Nucleoside diphosphate kinase KM388_RS07655 PF01264 Chorismate synthase KM388_RS07660 PF01761 3-dehydroquinate synthase KM388_RS07665 PF00155 Aminotransferase class I and II KM388_RS07675 PF08858 IDEAL domain KM388_RS07675 PF08864 UPF0302 domain KM388_RS07680 PF10673 Protein of unknown function (DUF2487) KM388_RS07685 PF00355 Rieske [2Fe-2S] domain KM388_RS07690 PF00033 Cytochrome b/b6/petB KM388_RS07695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM388_RS07695 PF00032 Cytochrome b(C-terminal)/b6/petD KM388_RS07700 PF07187 Protein of unknown function (DUF1405) KM388_RS07710 PF09577 Sporulation protein YpjB (SpoYpjB) KM388_RS07715 PF04298 Putative neutral zinc metallopeptidase KM388_RS07725 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS07725 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM388_RS07730 PF03819 MazG nucleotide pyrophosphohydrolase domain KM388_RS07735 PF05173 Dihydrodipicolinate reductase, C-terminus KM388_RS07735 PF01113 Dihydrodipicolinate reductase, N-terminus KM388_RS07740 PF02142 MGS-like domain KM388_RS07745 PF02585 GlcNAc-PI de-N-acetylase KM388_RS07750 PF00534 Glycosyl transferases group 1 KM388_RS07750 PF13439 Glycosyltransferase Family 4 KM388_RS07755 PF01743 Poly A polymerase head domain KM388_RS07755 PF12627 Probable RNA and SrmB- binding site of polymerase A KM388_RS07755 PF13735 tRNA nucleotidyltransferase domain 2 putative KM388_RS07760 PF08279 HTH domain KM388_RS07760 PF03099 Biotin/lipoate A/B protein ligase family KM388_RS07760 PF02237 Biotin protein ligase C terminal domain KM388_RS07770 PF02548 Ketopantoate hydroxymethyltransferase KM388_RS07775 PF02569 Pantoate-beta-alanine ligase KM388_RS07780 PF02261 Aspartate decarboxylase KM388_RS07790 PF14084 Protein of unknown function (DUF4264) KM388_RS07800 PF00155 Aminotransferase class I and II KM388_RS07805 PF07261 Replication initiation and membrane attachment KM388_RS07810 PF10576 Iron-sulfur binding domain of endonuclease III KM388_RS07810 PF00633 Helix-hairpin-helix motif KM388_RS07810 PF00730 HhH-GPD superfamily base excision DNA repair protein KM388_RS07820 PF00912 Transglycosylase KM388_RS07820 PF00905 Penicillin binding protein transpeptidase domain KM388_RS07825 PF03838 Recombination protein U KM388_RS07830 PF10720 Protein of unknown function (DUF2515) KM388_RS07865 PF06908 YspA SLOG family KM388_RS07870 PF05103 DivIVA protein KM388_RS07880 PF01170 Putative RNA methylase family UPF0020 KM388_RS07880 PF02926 THUMP domain KM388_RS07890 PF13307 Helicase C-terminal domain KM388_RS07895 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM388_RS07905 PF01636 Phosphotransferase enzyme family KM388_RS07910 PF00557 Metallopeptidase family M24 KM388_RS07915 PF00156 Phosphoribosyl transferase domain KM388_RS07920 PF00860 Permease family KM388_RS07925 PF04235 Protein of unknown function (DUF418) KM388_RS07930 PF00350 Dynamin family KM388_RS07940 PF00583 Acetyltransferase (GNAT) family KM388_RS07945 PF10752 Protein of unknown function (DUF2533) KM388_RS07950 PF00581 Rhodanese-like domain KM388_RS07985 PF00690 Cation transporter/ATPase, N-terminus KM388_RS07985 PF00689 Cation transporting ATPase, C-terminus KM388_RS07990 PF01367 5'-3' exonuclease, C-terminal SAM fold KM388_RS07990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM388_RS08015 PF02397 Bacterial sugar transferase KM388_RS08030 PF00535 Glycosyl transferase family 2 KM388_RS08050 PF18014 Acetyltransferase (GNAT) domain KM388_RS08050 PF13673 Acetyltransferase (GNAT) domain KM388_RS08070 PF13456 Reverse transcriptase-like KM388_RS08100 PF00313 'Cold-shock' DNA-binding domain KM388_RS08110 PF01810 LysE type translocator KM388_RS08125 PF04341 Protein of unknown function, DUF485 KM388_RS08130 PF00474 Sodium:solute symporter family KM388_RS08135 PF00202 Aminotransferase class-III KM388_RS08145 PF00999 Sodium/hydrogen exchanger family KM388_RS08150 PF17770 Ribonuclease J C-terminal domain KM388_RS08150 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM388_RS08150 PF00753 Metallo-beta-lactamase superfamily KM388_RS08155 PF13411 MerR HTH family regulatory protein KM388_RS08155 PF06445 GyrI-like small molecule binding domain KM388_RS08165 PF04239 Protein of unknown function (DUF421) KM388_RS08170 PF02698 DUF218 domain KM388_RS08180 PF00881 Nitroreductase family KM388_RS08225 PF17209 Hfq protein KM388_RS08235 PF01618 MotA/TolQ/ExbB proton channel family KM388_RS08240 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM388_RS08240 PF00691 OmpA family KM388_RS08245 PF00072 Response regulator receiver domain KM388_RS08255 PF04509 CheC-like family KM388_RS08255 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM388_RS08270 PF01739 CheR methyltransferase, SAM binding domain KM388_RS08270 PF03705 CheR methyltransferase, all-alpha domain KM388_RS08290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM388_RS08290 PF00460 Flagella basal body rod protein KM388_RS08315 PF00460 Flagella basal body rod protein KM388_RS08320 PF00460 Flagella basal body rod protein KM388_RS08320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM388_RS08325 PF02049 Flagellar hook-basal body complex protein FliE KM388_RS08335 PF14842 FliG N-terminal domain KM388_RS08335 PF14841 FliG middle domain KM388_RS08335 PF01706 FliG C-terminal domain KM388_RS08345 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM388_RS08345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM388_RS08345 PF18269 T3SS EscN ATPase C-terminal domain KM388_RS08365 PF07559 Flagellar basal body protein FlaE KM388_RS08365 PF00460 Flagella basal body rod protein KM388_RS08365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM388_RS08380 PF01584 CheW-like domain KM388_RS08380 PF00072 Response regulator receiver domain KM388_RS08385 PF12181 DNA binding domain of the motility gene repressor (MogR) KM388_RS08390 PF00535 Glycosyl transferase family 2 KM388_RS08415 PF13181 Tetratricopeptide repeat KM388_RS08415 PF00535 Glycosyl transferase family 2 KM388_RS08430 PF00669 Bacterial flagellin N-terminal helical region KM388_RS08430 PF00700 Bacterial flagellin C-terminal helical region KM388_RS08435 PF01464 Transglycosylase SLT domain KM388_RS08450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM388_RS08450 PF04509 CheC-like family KM388_RS08460 PF00813 FliP family KM388_RS08465 PF01313 Bacterial export proteins, family 3 KM388_RS08475 PF01312 FlhB HrpN YscU SpaS Family KM388_RS08480 PF00771 FHIPEP family KM388_RS08485 PF00448 SRP54-type protein, GTPase domain KM388_RS08490 PF00460 Flagella basal body rod protein KM388_RS08490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM388_RS08495 PF02272 DHHA1 domain KM388_RS08495 PF01411 tRNA synthetases class II (A) KM388_RS08495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM388_RS08520 PF00440 Bacterial regulatory proteins, tetR family KM388_RS08520 PF17932 Tetracyclin repressor-like, C-terminal domain KM388_RS08525 PF17329 Family of unknown function (DUF5367) KM388_RS08540 PF03992 Antibiotic biosynthesis monooxygenase KM388_RS08545 PF08141 Small acid-soluble spore protein H family KM388_RS08570 PF00005 ABC transporter KM388_RS08570 PF08402 TOBE domain KM388_RS08580 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS08585 PF00753 Metallo-beta-lactamase superfamily KM388_RS08585 PF12706 Beta-lactamase superfamily domain KM388_RS08610 PF00768 D-alanyl-D-alanine carboxypeptidase KM388_RS08610 PF07943 Penicillin-binding protein 5, C-terminal domain KM388_RS08650 PF00733 Asparagine synthase KM388_RS08650 PF13537 Glutamine amidotransferase domain KM388_RS08670 PF16916 Dimerisation domain of Zinc Transporter KM388_RS08670 PF01545 Cation efflux family KM388_RS08680 PF00392 Bacterial regulatory proteins, gntR family KM388_RS08680 PF07729 FCD domain KM388_RS08685 PF00892 EamA-like transporter family KM388_RS08690 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM388_RS08690 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM388_RS08695 PF03773 Predicted permease KM388_RS08705 PF00535 Glycosyl transferase family 2 KM388_RS08710 PF03553 Na+/H+ antiporter family KM388_RS08715 PF10415 Fumarase C C-terminus KM388_RS08715 PF00206 Lyase KM388_RS08740 PF03575 Peptidase family S51 KM388_RS08760 PF02683 Cytochrome C biogenesis protein transmembrane region KM388_RS08765 PF00578 AhpC/TSA family KM388_RS08785 PF00291 Pyridoxal-phosphate dependent enzyme KM388_RS08790 PF04286 Protein of unknown function (DUF445) KM388_RS08815 PF00196 Bacterial regulatory proteins, luxR family KM388_RS08815 PF00072 Response regulator receiver domain KM388_RS08820 PF13185 GAF domain KM388_RS08820 PF13492 GAF domain KM388_RS08820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS08820 PF07730 Histidine kinase KM388_RS08825 PF00005 ABC transporter KM388_RS08840 PF13091 PLD-like domain KM388_RS08845 PF00696 Amino acid kinase family KM388_RS08850 PF00375 Sodium:dicarboxylate symporter family KM388_RS08855 PF10415 Fumarase C C-terminus KM388_RS08855 PF00206 Lyase KM388_RS08860 PF03949 Malic enzyme, NAD binding domain KM388_RS08860 PF00390 Malic enzyme, N-terminal domain KM388_RS08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS08870 PF00072 Response regulator receiver domain KM388_RS08870 PF08664 YcbB domain KM388_RS08875 PF00271 Helicase conserved C-terminal domain KM388_RS08875 PF00176 SNF2 family N-terminal domain KM388_RS08875 PF04434 SWIM zinc finger KM388_RS08890 PF03590 Aspartate-ammonia ligase KM388_RS08910 PF13840 ACT domain KM388_RS08910 PF00696 Amino acid kinase family KM388_RS08920 PF13761 Domain of unknown function (DUF4166) KM388_RS08925 PF14158 YndJ-like protein KM388_RS08935 PF00395 S-layer homology domain KM388_RS08935 PF13205 Bacterial Ig-like domain KM388_RS08935 PF02368 Bacterial Ig-like domain (group 2) KM388_RS08945 PF07690 Major Facilitator Superfamily KM388_RS08960 PF02554 Carbon starvation protein CstA KM388_RS08965 PF03976 Polyphosphate kinase 2 (PPK2) KM388_RS08970 PF07690 Major Facilitator Superfamily KM388_RS08975 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM388_RS08975 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM388_RS08985 PF16360 GTP-binding GTPase Middle Region KM388_RS08985 PF13167 GTP-binding GTPase N-terminal KM388_RS08985 PF01926 50S ribosome-binding GTPase KM388_RS09015 PF01943 Polysaccharide biosynthesis protein KM388_RS09015 PF14667 Polysaccharide biosynthesis C-terminal domain KM388_RS09020 PF00209 Sodium:neurotransmitter symporter family KM388_RS09025 PF00457 Glycosyl hydrolases family 11 KM388_RS09025 PF01522 Polysaccharide deacetylase KM388_RS09025 PF03422 Carbohydrate binding module (family 6) KM388_RS09035 PF04239 Protein of unknown function (DUF421) KM388_RS09055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM388_RS09055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM388_RS09070 PF01625 Peptide methionine sulfoxide reductase KM388_RS09080 PF01063 Amino-transferase class IV KM388_RS09085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM388_RS09085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM388_RS09085 PF00205 Thiamine pyrophosphate enzyme, central domain KM388_RS09090 PF10369 Small subunit of acetolactate synthase KM388_RS09095 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM388_RS09095 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM388_RS09100 PF00920 Dehydratase family KM388_RS09105 PF00291 Pyridoxal-phosphate dependent enzyme KM388_RS09105 PF00585 C-terminal regulatory domain of Threonine dehydratase KM388_RS09135 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM388_RS09145 PF04397 LytTr DNA-binding domain KM388_RS09145 PF00072 Response regulator receiver domain KM388_RS09150 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM388_RS09150 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM388_RS09165 PF01979 Amidohydrolase family KM388_RS09170 PF13026 Protein of unknown function (DUF3887) KM388_RS09170 PF12146 Serine aminopeptidase, S33 KM388_RS09175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS09200 PF13186 Iron-sulfur cluster-binding domain KM388_RS09200 PF04055 Radical SAM superfamily KM388_RS09205 PF13302 Acetyltransferase (GNAT) domain KM388_RS09210 PF00072 Response regulator receiver domain KM388_RS09210 PF00486 Transcriptional regulatory protein, C terminal KM388_RS09225 PF01566 Natural resistance-associated macrophage protein KM388_RS09230 PF00581 Rhodanese-like domain KM388_RS09230 PF12368 Rhodanase C-terminal KM388_RS09230 PF17773 UPF0176 acylphosphatase like domain KM388_RS09240 PF02558 Ketopantoate reductase PanE/ApbA KM388_RS09240 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM388_RS09255 PF05791 Bacillus haemolytic enterotoxin (HBL) KM388_RS09270 PF04198 Putative sugar-binding domain KM388_RS09275 PF01791 DeoC/LacD family aldolase KM388_RS09280 PF07662 Na+ dependent nucleoside transporter C-terminus KM388_RS09280 PF01773 Na+ dependent nucleoside transporter N-terminus KM388_RS09285 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM388_RS09285 PF00591 Glycosyl transferase family, a/b domain KM388_RS09285 PF02885 Glycosyl transferase family, helical bundle domain KM388_RS09290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM388_RS09300 PF05979 Bacterial protein of unknown function (DUF896) KM388_RS09320 PF00557 Metallopeptidase family M24 KM388_RS09320 PF05195 Aminopeptidase P, N-terminal domain KM388_RS09325 PF07732 Multicopper oxidase KM388_RS09325 PF07731 Multicopper oxidase KM388_RS09330 PF01551 Peptidase family M23 KM388_RS09340 PF01131 DNA topoisomerase KM388_RS09340 PF01751 Toprim domain KM388_RS09340 PF13342 C-terminal repeat of topoisomerase KM388_RS09340 PF01396 Topoisomerase DNA binding C4 zinc finger KM388_RS09355 PF02525 Flavodoxin-like fold KM388_RS09370 PF04234 CopC domain KM388_RS09370 PF13115 YtkA-like KM388_RS09370 PF05425 Copper resistance protein D KM388_RS09375 PF07987 Domain of unkown function (DUF1775) KM388_RS09385 PF00892 EamA-like transporter family KM388_RS09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS09390 PF03466 LysR substrate binding domain KM388_RS09395 PF02082 Transcriptional regulator KM388_RS09400 PF01323 DSBA-like thioredoxin domain KM388_RS09405 PF00881 Nitroreductase family KM388_RS09410 PF01425 Amidase KM388_RS09415 PF01594 AI-2E family transporter KM388_RS09420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM388_RS09420 PF00056 lactate/malate dehydrogenase, NAD binding domain KM388_RS09425 PF01593 Flavin containing amine oxidoreductase KM388_RS09430 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM388_RS09430 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM388_RS09445 PF13193 AMP-binding enzyme C-terminal domain KM388_RS09445 PF00501 AMP-binding enzyme KM388_RS09450 PF01575 MaoC like domain KM388_RS09455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM388_RS09455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM388_RS09465 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM388_RS09465 PF00005 ABC transporter KM388_RS09470 PF00005 ABC transporter KM388_RS09475 PF02653 Branched-chain amino acid transport system / permease component KM388_RS09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS09485 PF03466 LysR substrate binding domain KM388_RS09495 PF14552 Tautomerase enzyme KM388_RS09505 PF01047 MarR family KM388_RS09515 PF01654 Cytochrome bd terminal oxidase subunit I KM388_RS09520 PF02322 Cytochrome bd terminal oxidase subunit II KM388_RS09525 PF00664 ABC transporter transmembrane region KM388_RS09525 PF00005 ABC transporter KM388_RS09530 PF00664 ABC transporter transmembrane region KM388_RS09530 PF00005 ABC transporter KM388_RS09545 PF02016 LD-carboxypeptidase N-terminal domain KM388_RS09545 PF17676 LD-carboxypeptidase C-terminal domain KM388_RS09550 PF00768 D-alanyl-D-alanine carboxypeptidase KM388_RS09550 PF07943 Penicillin-binding protein 5, C-terminal domain KM388_RS09565 PF01476 LysM domain KM388_RS09565 PF00877 NlpC/P60 family KM388_RS09580 PF00486 Transcriptional regulatory protein, C terminal KM388_RS09580 PF00072 Response regulator receiver domain KM388_RS09595 PF00106 short chain dehydrogenase KM388_RS09605 PF04439 Streptomycin adenylyltransferase KM388_RS09610 PF01522 Polysaccharide deacetylase KM388_RS09630 PF00742 Homoserine dehydrogenase KM388_RS09630 PF03447 Homoserine dehydrogenase, NAD binding domain KM388_RS09630 PF01842 ACT domain KM388_RS09635 PF00291 Pyridoxal-phosphate dependent enzyme KM388_RS09640 PF08544 GHMP kinases C terminal KM388_RS09640 PF00288 GHMP kinases N terminal domain KM388_RS09655 PF03816 Cell envelope-related transcriptional attenuator domain KM388_RS09665 PF00072 Response regulator receiver domain KM388_RS09665 PF00486 Transcriptional regulatory protein, C terminal KM388_RS09670 PF00989 PAS fold KM388_RS09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS09670 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS09670 PF16736 Single Cache-like KM388_RS09675 PF01522 Polysaccharide deacetylase KM388_RS09685 PF02308 MgtC family KM388_RS09690 PF00583 Acetyltransferase (GNAT) family KM388_RS09695 PF06276 Ferric iron reductase FhuF-like transporter KM388_RS09695 PF04183 IucA / IucC family KM388_RS09700 PF04183 IucA / IucC family KM388_RS09700 PF06276 Ferric iron reductase FhuF-like transporter KM388_RS09705 PF00501 AMP-binding enzyme KM388_RS09705 PF13193 AMP-binding enzyme C-terminal domain KM388_RS09720 PF01261 Xylose isomerase-like TIM barrel KM388_RS09725 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM388_RS09730 PF07690 Major Facilitator Superfamily KM388_RS09735 PF01810 LysE type translocator KM388_RS09745 PF01734 Patatin-like phospholipase KM388_RS09770 PF00293 NUDIX domain KM388_RS09770 PF13344 Haloacid dehalogenase-like hydrolase KM388_RS09775 PF02540 NAD synthase KM388_RS09780 PF02687 FtsX-like permease family KM388_RS09785 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM388_RS09785 PF18277 AbrB C-terminal domain KM388_RS09790 PF00082 Subtilase family KM388_RS09795 PF01022 Bacterial regulatory protein, arsR family KM388_RS09800 PF00248 Aldo/keto reductase family KM388_RS09805 PF07690 Major Facilitator Superfamily KM388_RS09825 PF03193 RsgA GTPase KM388_RS09830 PF00672 HAMP domain KM388_RS09830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS09830 PF02743 Cache domain KM388_RS09850 PF00210 Ferritin-like domain KM388_RS09865 PF00296 Luciferase-like monooxygenase KM388_RS09875 PF01593 Flavin containing amine oxidoreductase KM388_RS09885 PF00248 Aldo/keto reductase family KM388_RS09890 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM388_RS09890 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM388_RS09895 PF00583 Acetyltransferase (GNAT) family KM388_RS09950 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM388_RS09950 PF01297 Zinc-uptake complex component A periplasmic KM388_RS09960 PF13460 NAD(P)H-binding KM388_RS09965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM388_RS09970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM388_RS09970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM388_RS09980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS09985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS09995 PF00300 Histidine phosphatase superfamily (branch 1) KM388_RS10005 PF08757 CotH kinase protein KM388_RS10010 PF00293 NUDIX domain KM388_RS10015 PF09335 SNARE associated Golgi protein KM388_RS10020 PF01943 Polysaccharide biosynthesis protein KM388_RS10020 PF14667 Polysaccharide biosynthesis C-terminal domain KM388_RS10030 PF03773 Predicted permease KM388_RS10035 PF09323 Domain of unknown function (DUF1980) KM388_RS10040 PF03061 Thioesterase superfamily KM388_RS10050 PF13396 Phospholipase_D-nuclease N-terminal KM388_RS10050 PF13091 PLD-like domain KM388_RS10065 PF13460 NAD(P)H-binding KM388_RS10070 PF04306 Protein of unknown function (DUF456) KM388_RS10075 PF03471 Transporter associated domain KM388_RS10075 PF01595 Cyclin M transmembrane N-terminal domain KM388_RS10075 PF00571 CBS domain KM388_RS10090 PF05525 Branched-chain amino acid transport protein KM388_RS10095 PF01588 Putative tRNA binding domain KM388_RS10115 PF07454 Stage II sporulation protein P (SpoIIP) KM388_RS10125 PF02557 D-alanyl-D-alanine carboxypeptidase KM388_RS10135 PF01425 Amidase KM388_RS10140 PF07690 Major Facilitator Superfamily KM388_RS10150 PF01145 SPFH domain / Band 7 family KM388_RS10155 PF00300 Histidine phosphatase superfamily (branch 1) KM388_RS10170 PF01168 Alanine racemase, N-terminal domain KM388_RS10170 PF00842 Alanine racemase, C-terminal domain KM388_RS10175 PF13847 Methyltransferase domain KM388_RS10190 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM388_RS10195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS10195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM388_RS10200 PF00392 Bacterial regulatory proteins, gntR family KM388_RS10200 PF00155 Aminotransferase class I and II KM388_RS10235 PF00583 Acetyltransferase (GNAT) family KM388_RS10290 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM388_RS10320 PF01268 Formate--tetrahydrofolate ligase KM388_RS10330 PF00271 Helicase conserved C-terminal domain KM388_RS10330 PF00270 DEAD/DEAH box helicase KM388_RS10340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS10350 PF00107 Zinc-binding dehydrogenase KM388_RS10350 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS10355 PF08281 Sigma-70, region 4 KM388_RS10355 PF04542 Sigma-70 region 2 KM388_RS10380 PF00255 Glutathione peroxidase KM388_RS10385 PF13559 Domain of unknown function (DUF4129) KM388_RS10385 PF01841 Transglutaminase-like superfamily KM388_RS10385 PF11992 Domain of unknown function (DUF3488) KM388_RS10390 PF01882 Protein of unknown function DUF58 KM388_RS10395 PF07726 ATPase family associated with various cellular activities (AAA) KM388_RS10395 PF17863 AAA lid domain KM388_RS10410 PF14710 Respiratory nitrate reductase alpha N-terminal KM388_RS10410 PF01568 Molydopterin dinucleotide binding domain KM388_RS10410 PF00384 Molybdopterin oxidoreductase KM388_RS10415 PF13247 4Fe-4S dicluster domain KM388_RS10415 PF14711 Respiratory nitrate reductase beta C-terminal KM388_RS10420 PF02613 Nitrate reductase delta subunit KM388_RS10425 PF02665 Nitrate reductase gamma subunit KM388_RS10430 PF00392 Bacterial regulatory proteins, gntR family KM388_RS10430 PF00155 Aminotransferase class I and II KM388_RS10435 PF00005 ABC transporter KM388_RS10445 PF00027 Cyclic nucleotide-binding domain KM388_RS10445 PF00325 Bacterial regulatory proteins, crp family KM388_RS10450 PF06463 Molybdenum Cofactor Synthesis C KM388_RS10450 PF04055 Radical SAM superfamily KM388_RS10455 PF00899 ThiF family KM388_RS10460 PF03454 MoeA C-terminal region (domain IV) KM388_RS10460 PF03453 MoeA N-terminal region (domain I and II) KM388_RS10460 PF00994 Probable molybdopterin binding domain KM388_RS10465 PF02391 MoaE protein KM388_RS10475 PF07690 Major Facilitator Superfamily KM388_RS10495 PF01903 CbiX KM388_RS10500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM388_RS10505 PF00355 Rieske [2Fe-2S] domain KM388_RS10510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM388_RS10510 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS10510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM388_RS10510 PF04324 BFD-like [2Fe-2S] binding domain KM388_RS10510 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM388_RS10515 PF01814 Hemerythrin HHE cation binding domain KM388_RS10515 PF04405 Domain of Unknown function (DUF542) KM388_RS10550 PF04232 Stage V sporulation protein S (SpoVS) KM388_RS10575 PF01966 HD domain KM388_RS10580 PF12848 ABC transporter KM388_RS10580 PF16326 ABC transporter C-terminal domain KM388_RS10580 PF00005 ABC transporter KM388_RS10595 PF00436 Single-strand binding protein family KM388_RS10600 PF00440 Bacterial regulatory proteins, tetR family KM388_RS10610 PF13769 Virulence factor KM388_RS10610 PF08712 Scaffold protein Nfu/NifU N terminal KM388_RS10620 PF06491 Disulphide isomerase KM388_RS10625 PF04445 Putative SAM-dependent methyltransferase KM388_RS10630 PF05746 DALR anticodon binding domain KM388_RS10630 PF03485 Arginyl tRNA synthetase N terminal domain KM388_RS10630 PF00750 tRNA synthetases class I (R) KM388_RS10655 PF08264 Anticodon-binding domain of tRNA KM388_RS10655 PF00133 tRNA synthetases class I (I, L, M and V) KM388_RS10675 PF00152 tRNA synthetases class II (D, K and N) KM388_RS10675 PF01336 OB-fold nucleic acid binding domain KM388_RS10695 PF12538 DNA transporter KM388_RS10695 PF01580 FtsK/SpoIIIE family KM388_RS10765 PF02595 Glycerate kinase family KM388_RS10770 PF00939 Sodium:sulfate symporter transmembrane region KM388_RS10775 PF00486 Transcriptional regulatory protein, C terminal KM388_RS10775 PF00072 Response regulator receiver domain KM388_RS10780 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS10780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS10780 PF00672 HAMP domain KM388_RS10795 PF00209 Sodium:neurotransmitter symporter family KM388_RS10810 PF10997 Alternate to MurJ KM388_RS10815 PF13419 Haloacid dehalogenase-like hydrolase KM388_RS10825 PF00465 Iron-containing alcohol dehydrogenase KM388_RS10830 PF01177 Asp/Glu/Hydantoin racemase KM388_RS10835 PF01980 tRNA-methyltransferase O KM388_RS10840 PF00583 Acetyltransferase (GNAT) family KM388_RS10855 PF00005 ABC transporter KM388_RS10865 PF14005 YpjP-like protein KM388_RS10870 PF13419 Haloacid dehalogenase-like hydrolase KM388_RS10890 PF07930 D-aminopeptidase, domain B KM388_RS10890 PF00144 Beta-lactamase KM388_RS10895 PF00303 Thymidylate synthase KM388_RS10900 PF00186 Dihydrofolate reductase KM388_RS10905 PF03717 Penicillin-binding Protein dimerisation domain KM388_RS10905 PF05223 NTF2-like N-terminal transpeptidase domain KM388_RS10905 PF00905 Penicillin binding protein transpeptidase domain KM388_RS10910 PF02525 Flavodoxin-like fold KM388_RS10915 PF01553 Acyltransferase KM388_RS10920 PF03006 Haemolysin-III related KM388_RS10925 PF02416 mttA/Hcf106 family KM388_RS10930 PF00902 Sec-independent protein translocase protein (TatC) KM388_RS10940 PF02645 Uncharacterised protein, DegV family COG1307 KM388_RS10950 PF02630 SCO1/SenC KM388_RS10955 PF00011 Hsp20/alpha crystallin family KM388_RS10960 PF13537 Glutamine amidotransferase domain KM388_RS10960 PF00733 Asparagine synthase KM388_RS10980 PF01497 Periplasmic binding protein KM388_RS10985 PF01063 Amino-transferase class IV KM388_RS10990 PF00881 Nitroreductase family KM388_RS11015 PF00011 Hsp20/alpha crystallin family KM388_RS11020 PF00924 Mechanosensitive ion channel KM388_RS11025 PF13185 GAF domain KM388_RS11025 PF07730 Histidine kinase KM388_RS11030 PF00196 Bacterial regulatory proteins, luxR family KM388_RS11030 PF00072 Response regulator receiver domain KM388_RS11040 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS11040 PF00107 Zinc-binding dehydrogenase KM388_RS11055 PF00144 Beta-lactamase KM388_RS11080 PF03358 NADPH-dependent FMN reductase KM388_RS11095 PF00571 CBS domain KM388_RS11095 PF00005 ABC transporter KM388_RS11100 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS11105 PF13520 Amino acid permease KM388_RS11135 PF01595 Cyclin M transmembrane N-terminal domain KM388_RS11135 PF03471 Transporter associated domain KM388_RS11135 PF00571 CBS domain KM388_RS11140 PF00171 Aldehyde dehydrogenase family KM388_RS11145 PF07997 Protein of unknown function (DUF1694) KM388_RS11150 PF09385 Histidine kinase N terminal KM388_RS11160 PF00202 Aminotransferase class-III KM388_RS11165 PF01144 Coenzyme A transferase KM388_RS11170 PF01144 Coenzyme A transferase KM388_RS11175 PF01546 Peptidase family M20/M25/M40 KM388_RS11175 PF07687 Peptidase dimerisation domain KM388_RS11180 PF00583 Acetyltransferase (GNAT) family KM388_RS11185 PF02954 Bacterial regulatory protein, Fis family KM388_RS11185 PF13426 PAS domain KM388_RS11185 PF00158 Sigma-54 interaction domain KM388_RS11190 PF12544 Lysine-2,3-aminomutase KM388_RS11195 PF14122 YokU-like protein, putative antitoxin KM388_RS11200 PF06855 YozE SAM-like fold KM388_RS11215 PF14162 YozD-like protein KM388_RS11230 PF07070 SpoOM protein KM388_RS11235 PF01569 PAP2 superfamily KM388_RS11240 PF16916 Dimerisation domain of Zinc Transporter KM388_RS11240 PF01545 Cation efflux family KM388_RS11245 PF00085 Thioredoxin KM388_RS11260 PF04740 LXG domain of WXG superfamily KM388_RS11260 PF14436 Bacterial EndoU nuclease KM388_RS11265 PF03424 Carbohydrate binding domain (family 17/28) KM388_RS11265 PF00395 S-layer homology domain KM388_RS11265 PF00150 Cellulase (glycosyl hydrolase family 5) KM388_RS11275 PF04471 Restriction endonuclease KM388_RS11385 PF10676 Spore germination protein gerPA/gerPF KM388_RS11405 PF00912 Transglycosylase KM388_RS11405 PF00905 Penicillin binding protein transpeptidase domain KM388_RS11415 PF07690 Major Facilitator Superfamily KM388_RS11420 PF01521 Iron-sulphur cluster biosynthesis KM388_RS11425 PF00285 Citrate synthase, C-terminal domain KM388_RS11430 PF03972 MmgE/PrpD family KM388_RS11440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM388_RS11440 PF02770 Acyl-CoA dehydrogenase, middle domain KM388_RS11440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM388_RS11445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM388_RS11445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM388_RS11450 PF00171 Aldehyde dehydrogenase family KM388_RS11455 PF01810 LysE type translocator KM388_RS11460 PF00378 Enoyl-CoA hydratase/isomerase KM388_RS11470 PF10763 Protein of unknown function (DUF2584) KM388_RS11475 PF00149 Calcineurin-like phosphoesterase KM388_RS11475 PF12320 Type 5 capsule protein repressor C-terminal domain KM388_RS11480 PF13476 AAA domain KM388_RS11490 PF01022 Bacterial regulatory protein, arsR family KM388_RS11500 PF07690 Major Facilitator Superfamily KM388_RS11505 PF00106 short chain dehydrogenase KM388_RS11510 PF00425 chorismate binding enzyme KM388_RS11515 PF00501 AMP-binding enzyme KM388_RS11515 PF13193 AMP-binding enzyme C-terminal domain KM388_RS11520 PF00857 Isochorismatase family KM388_RS11520 PF00550 Phosphopantetheine attachment site KM388_RS11530 PF03621 MbtH-like protein KM388_RS11535 PF07690 Major Facilitator Superfamily KM388_RS11550 PF00216 Bacterial DNA-binding protein KM388_RS11560 PF05163 DinB family KM388_RS11565 PF00082 Subtilase family KM388_RS11585 PF16291 Domain of unknown function (DUF4937 KM388_RS11590 PF00849 RNA pseudouridylate synthase KM388_RS11590 PF01479 S4 domain KM388_RS11595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM388_RS11595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM388_RS11595 PF02824 TGS domain KM388_RS11595 PF03129 Anticodon binding domain KM388_RS11610 PF12146 Serine aminopeptidase, S33 KM388_RS11615 PF07690 Major Facilitator Superfamily KM388_RS11635 PF13649 Methyltransferase domain KM388_RS11680 PF00753 Metallo-beta-lactamase superfamily KM388_RS11680 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM388_RS11690 PF03176 MMPL family KM388_RS11700 PF00302 Chloramphenicol acetyltransferase KM388_RS11715 PF00583 Acetyltransferase (GNAT) family KM388_RS11745 PF01593 Flavin containing amine oxidoreductase KM388_RS11755 PF13302 Acetyltransferase (GNAT) domain KM388_RS11765 PF00313 'Cold-shock' DNA-binding domain KM388_RS11825 PF03466 LysR substrate binding domain KM388_RS11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS11830 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM388_RS11830 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM388_RS11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS11845 PF03466 LysR substrate binding domain KM388_RS11850 PF03473 MOSC domain KM388_RS11850 PF03475 3-alpha domain KM388_RS11865 PF00005 ABC transporter KM388_RS11865 PF00664 ABC transporter transmembrane region KM388_RS11870 PF00664 ABC transporter transmembrane region KM388_RS11870 PF00005 ABC transporter KM388_RS11885 PF01810 LysE type translocator KM388_RS11890 PF01381 Helix-turn-helix KM388_RS11890 PF07883 Cupin domain KM388_RS11915 PF00890 FAD binding domain KM388_RS11920 PF08281 Sigma-70, region 4 KM388_RS11920 PF04542 Sigma-70 region 2 KM388_RS11920 PF12680 SnoaL-like domain KM388_RS11945 PF02638 Glycosyl hydrolase-like 10 KM388_RS11955 PF02378 Phosphotransferase system, EIIC KM388_RS11965 PF03702 Anhydro-N-acetylmuramic acid kinase KM388_RS11970 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM388_RS11975 PF02660 Glycerol-3-phosphate acyltransferase KM388_RS11980 PF00266 Aminotransferase class-V KM388_RS11985 PF00291 Pyridoxal-phosphate dependent enzyme KM388_RS12000 PF00753 Metallo-beta-lactamase superfamily KM388_RS12000 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM388_RS12015 PF00271 Helicase conserved C-terminal domain KM388_RS12015 PF00270 DEAD/DEAH box helicase KM388_RS12030 PF00440 Bacterial regulatory proteins, tetR family KM388_RS12030 PF17932 Tetracyclin repressor-like, C-terminal domain KM388_RS12045 PF12704 MacB-like periplasmic core domain KM388_RS12045 PF00005 ABC transporter KM388_RS12045 PF02687 FtsX-like permease family KM388_RS12050 PF03848 Tellurite resistance protein TehB KM388_RS12050 PF09313 Domain of unknown function (DUF1971) KM388_RS12060 PF08241 Methyltransferase domain KM388_RS12065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM388_RS12065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM388_RS12065 PF00205 Thiamine pyrophosphate enzyme, central domain KM388_RS12070 PF12802 MarR family KM388_RS12075 PF00300 Histidine phosphatase superfamily (branch 1) KM388_RS12080 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM388_RS12110 PF07687 Peptidase dimerisation domain KM388_RS12110 PF01546 Peptidase family M20/M25/M40 KM388_RS12125 PF08281 Sigma-70, region 4 KM388_RS12125 PF04542 Sigma-70 region 2 KM388_RS12135 PF03717 Penicillin-binding Protein dimerisation domain KM388_RS12135 PF00905 Penicillin binding protein transpeptidase domain KM388_RS12140 PF03717 Penicillin-binding Protein dimerisation domain KM388_RS12140 PF00905 Penicillin binding protein transpeptidase domain KM388_RS12150 PF01569 PAP2 superfamily KM388_RS12155 PF00356 Bacterial regulatory proteins, lacI family KM388_RS12160 PF07690 Major Facilitator Superfamily KM388_RS12165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM388_RS12165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM388_RS12170 PF00294 pfkB family carbohydrate kinase KM388_RS12175 PF00171 Aldehyde dehydrogenase family KM388_RS12180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM388_RS12180 PF00205 Thiamine pyrophosphate enzyme, central domain KM388_RS12180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM388_RS12190 PF01116 Fructose-bisphosphate aldolase class-II KM388_RS12210 PF00149 Calcineurin-like phosphoesterase KM388_RS12210 PF02872 5'-nucleotidase, C-terminal domain KM388_RS12225 PF01381 Helix-turn-helix KM388_RS12240 PF02557 D-alanyl-D-alanine carboxypeptidase KM388_RS12250 PF00395 S-layer homology domain KM388_RS12250 PF01520 N-acetylmuramoyl-L-alanine amidase KM388_RS12260 PF00440 Bacterial regulatory proteins, tetR family KM388_RS12265 PF00005 ABC transporter KM388_RS12265 PF16326 ABC transporter C-terminal domain KM388_RS12275 PF03707 Bacterial signalling protein N terminal repeat KM388_RS12275 PF00563 EAL domain KM388_RS12275 PF00990 Diguanylate cyclase, GGDEF domain KM388_RS12280 PF13302 Acetyltransferase (GNAT) domain KM388_RS12300 PF00581 Rhodanese-like domain KM388_RS12315 PF00005 ABC transporter KM388_RS12325 PF08359 YsiA-like protein, C-terminal region KM388_RS12325 PF00440 Bacterial regulatory proteins, tetR family KM388_RS12340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM388_RS12340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM388_RS12340 PF02770 Acyl-CoA dehydrogenase, middle domain KM388_RS12345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM388_RS12345 PF00289 Biotin carboxylase, N-terminal domain KM388_RS12345 PF02785 Biotin carboxylase C-terminal domain KM388_RS12350 PF00364 Biotin-requiring enzyme KM388_RS12355 PF00682 HMGL-like KM388_RS12360 PF00378 Enoyl-CoA hydratase/isomerase KM388_RS12365 PF01039 Carboxyl transferase domain KM388_RS12370 PF00501 AMP-binding enzyme KM388_RS12370 PF13193 AMP-binding enzyme C-terminal domain KM388_RS12370 PF16177 Acetyl-coenzyme A synthetase N-terminus KM388_RS12380 PF00583 Acetyltransferase (GNAT) family KM388_RS12385 PF00485 Phosphoribulokinase / Uridine kinase family KM388_RS12395 PF05163 DinB family KM388_RS12400 PF07943 Penicillin-binding protein 5, C-terminal domain KM388_RS12400 PF00768 D-alanyl-D-alanine carboxypeptidase KM388_RS12405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS12405 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS12410 PF00486 Transcriptional regulatory protein, C terminal KM388_RS12410 PF00072 Response regulator receiver domain KM388_RS12415 PF01966 HD domain KM388_RS12420 PF13021 Domain of unknown function (DUF3885) KM388_RS12425 PF01048 Phosphorylase superfamily KM388_RS12465 PF17760 UvrA interaction domain KM388_RS12465 PF17755 UvrA DNA-binding domain KM388_RS12465 PF17755 UvrA DNA-binding domain KM388_RS12465 PF17760 UvrA interaction domain KM388_RS12480 PF00144 Beta-lactamase KM388_RS12485 PF00376 MerR family regulatory protein KM388_RS12485 PF09278 MerR, DNA binding KM388_RS12490 PF07690 Major Facilitator Superfamily KM388_RS12505 PF01636 Phosphotransferase enzyme family KM388_RS12510 PF12833 Helix-turn-helix domain KM388_RS12525 PF00155 Aminotransferase class I and II KM388_RS12525 PF00392 Bacterial regulatory proteins, gntR family KM388_RS12540 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS12540 PF00107 Zinc-binding dehydrogenase KM388_RS12555 PF01225 Mur ligase family, catalytic domain KM388_RS12555 PF02875 Mur ligase family, glutamate ligase domain KM388_RS12555 PF08245 Mur ligase middle domain KM388_RS12560 PF08245 Mur ligase middle domain KM388_RS12560 PF02875 Mur ligase family, glutamate ligase domain KM388_RS12560 PF01225 Mur ligase family, catalytic domain KM388_RS12575 PF07486 Cell Wall Hydrolase KM388_RS12585 PF00072 Response regulator receiver domain KM388_RS12585 PF00486 Transcriptional regulatory protein, C terminal KM388_RS12600 PF12848 ABC transporter KM388_RS12600 PF00005 ABC transporter KM388_RS12615 PF00005 ABC transporter KM388_RS12640 PF03447 Homoserine dehydrogenase, NAD binding domain KM388_RS12640 PF00742 Homoserine dehydrogenase KM388_RS12640 PF01842 ACT domain KM388_RS12645 PF00155 Aminotransferase class I and II KM388_RS12645 PF00392 Bacterial regulatory proteins, gntR family KM388_RS12650 PF07478 D-ala D-ala ligase C-terminus KM388_RS12650 PF01820 D-ala D-ala ligase N-terminus KM388_RS12655 PF03070 TENA/THI-4/PQQC family KM388_RS12725 PF00067 Cytochrome P450 KM388_RS12735 PF00132 Bacterial transferase hexapeptide (six repeats) KM388_RS12740 PF07561 Domain of Unknown Function (DUF1540) KM388_RS12770 PF03717 Penicillin-binding Protein dimerisation domain KM388_RS12770 PF00905 Penicillin binding protein transpeptidase domain KM388_RS12775 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM388_RS12780 PF01177 Asp/Glu/Hydantoin racemase KM388_RS12785 PF07155 ECF-type riboflavin transporter, S component KM388_RS12790 PF12558 ATP-binding cassette cobalt transporter KM388_RS12790 PF00005 ABC transporter KM388_RS12805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS12805 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS12815 PF04229 GrpB protein KM388_RS12820 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS12820 PF00107 Zinc-binding dehydrogenase KM388_RS12825 PF03793 PASTA domain KM388_RS12825 PF03717 Penicillin-binding Protein dimerisation domain KM388_RS12825 PF00905 Penicillin binding protein transpeptidase domain KM388_RS12835 PF00144 Beta-lactamase KM388_RS12835 PF11954 Domain of unknown function (DUF3471) KM388_RS12870 PF01965 DJ-1/PfpI family KM388_RS12885 PF00144 Beta-lactamase KM388_RS12900 PF07690 Major Facilitator Superfamily KM388_RS12915 PF03009 Glycerophosphoryl diester phosphodiesterase family KM388_RS12935 PF00892 EamA-like transporter family KM388_RS12940 PF01270 Glycosyl hydrolases family 8 KM388_RS12955 PF00293 NUDIX domain KM388_RS12955 PF13344 Haloacid dehalogenase-like hydrolase KM388_RS12965 PF00144 Beta-lactamase KM388_RS12975 PF07690 Major Facilitator Superfamily KM388_RS12990 PF00293 NUDIX domain KM388_RS12990 PF09297 NADH pyrophosphatase zinc ribbon domain KM388_RS12995 PF02768 DNA polymerase III beta subunit, C-terminal domain KM388_RS12995 PF02767 DNA polymerase III beta subunit, central domain KM388_RS12995 PF00712 DNA polymerase III beta subunit, N-terminal domain KM388_RS13000 PF00293 NUDIX domain KM388_RS13015 PF12706 Beta-lactamase superfamily domain KM388_RS13035 PF09234 Domain of unknown function (DUF1963) KM388_RS13065 PF08000 Bacterial PH domain KM388_RS13075 PF12867 DinB superfamily KM388_RS13090 PF02673 Bacitracin resistance protein BacA KM388_RS13100 PF01541 GIY-YIG catalytic domain KM388_RS13140 PF01266 FAD dependent oxidoreductase KM388_RS13165 PF13419 Haloacid dehalogenase-like hydrolase KM388_RS13180 PF07859 alpha/beta hydrolase fold KM388_RS13185 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM388_RS13200 PF03714 Bacterial pullanase-associated domain KM388_RS13200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM388_RS13200 PF00128 Alpha amylase, catalytic domain KM388_RS13205 PF07504 Fungalysin/Thermolysin Propeptide Motif KM388_RS13205 PF03413 Peptidase propeptide and YPEB domain KM388_RS13205 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM388_RS13205 PF01447 Thermolysin metallopeptidase, catalytic domain KM388_RS13225 PF00344 SecY translocase KM388_RS13230 PF00308 Bacterial dnaA protein KM388_RS13230 PF08299 Bacterial dnaA protein helix-turn-helix KM388_RS13230 PF11638 DnaA N-terminal domain KM388_RS13235 PF00892 EamA-like transporter family KM388_RS13240 PF00155 Aminotransferase class I and II KM388_RS13240 PF00392 Bacterial regulatory proteins, gntR family KM388_RS13245 PF00561 alpha/beta hydrolase fold KM388_RS13270 PF06081 Aromatic acid exporter family member 1 KM388_RS13285 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM388_RS13290 PF03413 Peptidase propeptide and YPEB domain KM388_RS13290 PF14620 YpeB sporulation KM388_RS13295 PF07486 Cell Wall Hydrolase KM388_RS13295 PF01471 Putative peptidoglycan binding domain KM388_RS13310 PF03301 Tryptophan 2,3-dioxygenase KM388_RS13315 PF04199 Putative cyclase KM388_RS13320 PF00266 Aminotransferase class-V KM388_RS13325 PF00440 Bacterial regulatory proteins, tetR family KM388_RS13325 PF08359 YsiA-like protein, C-terminal region KM388_RS13330 PF13344 Haloacid dehalogenase-like hydrolase KM388_RS13330 PF00293 NUDIX domain KM388_RS13355 PF00158 Sigma-54 interaction domain KM388_RS13355 PF01590 GAF domain KM388_RS13355 PF02954 Bacterial regulatory protein, Fis family KM388_RS13370 PF13302 Acetyltransferase (GNAT) domain KM388_RS13375 PF08220 DeoR-like helix-turn-helix domain KM388_RS13375 PF00455 DeoR C terminal sensor domain KM388_RS13390 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS13390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM388_RS13390 PF00403 Heavy-metal-associated domain KM388_RS13395 PF02082 Transcriptional regulator KM388_RS13410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM388_RS13410 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS13415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM388_RS13415 PF00364 Biotin-requiring enzyme KM388_RS13415 PF02817 e3 binding domain KM388_RS13420 PF02779 Transketolase, pyrimidine binding domain KM388_RS13420 PF02780 Transketolase, C-terminal domain KM388_RS13425 PF00676 Dehydrogenase E1 component KM388_RS13435 PF00106 short chain dehydrogenase KM388_RS13440 PF13673 Acetyltransferase (GNAT) domain KM388_RS13440 PF04229 GrpB protein KM388_RS13470 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS13475 PF00005 ABC transporter KM388_RS13475 PF00571 CBS domain KM388_RS13480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM388_RS13485 PF00574 Clp protease KM388_RS13500 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM388_RS13505 PF13673 Acetyltransferase (GNAT) domain KM388_RS13510 PF18416 N-acetylglucosamine binding protein domain 2 KM388_RS13510 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM388_RS13525 PF10990 Protein of unknown function (DUF2809) KM388_RS13550 PF00753 Metallo-beta-lactamase superfamily KM388_RS13550 PF03772 Competence protein KM388_RS13550 PF13567 Domain of unknown function (DUF4131) KM388_RS13600 PF13538 UvrD-like helicase C-terminal domain KM388_RS13615 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM388_RS13620 PF09382 RQC domain KM388_RS13620 PF00270 DEAD/DEAH box helicase KM388_RS13620 PF00271 Helicase conserved C-terminal domain KM388_RS13620 PF00570 HRDC domain KM388_RS13620 PF16124 RecQ zinc-binding KM388_RS13660 PF01368 DHH family KM388_RS13660 PF02833 DHHA2 domain KM388_RS13665 PF18416 N-acetylglucosamine binding protein domain 2 KM388_RS13665 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM388_RS13680 PF02627 Carboxymuconolactone decarboxylase family KM388_RS13685 PF01235 Sodium:alanine symporter family KM388_RS13690 PF00171 Aldehyde dehydrogenase family KM388_RS13695 PF00701 Dihydrodipicolinate synthetase family KM388_RS13700 PF05544 Proline racemase KM388_RS13705 PF05544 Proline racemase KM388_RS13710 PF01266 FAD dependent oxidoreductase KM388_RS13715 PF02954 Bacterial regulatory protein, Fis family KM388_RS13715 PF13188 PAS domain KM388_RS13715 PF00158 Sigma-54 interaction domain KM388_RS13730 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS13730 PF04324 BFD-like [2Fe-2S] binding domain KM388_RS13745 PF08876 Domain of unknown function (DUF1836) KM388_RS13750 PF09335 SNARE associated Golgi protein KM388_RS13765 PF04914 DltD protein KM388_RS13770 PF03352 Methyladenine glycosylase KM388_RS13770 PF13302 Acetyltransferase (GNAT) domain KM388_RS13770 PF00117 Glutamine amidotransferase class-I KM388_RS13770 PF13673 Acetyltransferase (GNAT) domain KM388_RS13770 PF00958 GMP synthase C terminal domain KM388_RS13775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS13780 PF00877 NlpC/P60 family KM388_RS13780 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM388_RS13785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM388_RS13785 PF13378 Enolase C-terminal domain-like KM388_RS13805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM388_RS13830 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM388_RS13830 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM388_RS13835 PF00989 PAS fold KM388_RS13835 PF16736 Single Cache-like KM388_RS13835 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS13835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS13840 PF00486 Transcriptional regulatory protein, C terminal KM388_RS13840 PF00072 Response regulator receiver domain KM388_RS13860 PF01048 Phosphorylase superfamily KM388_RS13870 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM388_RS13885 PF02645 Uncharacterised protein, DegV family COG1307 KM388_RS13905 PF07690 Major Facilitator Superfamily KM388_RS13915 PF04519 Polymer-forming cytoskeletal KM388_RS13920 PF13171 Protein of unknown function (DUF4004) KM388_RS13925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS13925 PF12793 Sugar transport-related sRNA regulator N-term KM388_RS13930 PF07690 Major Facilitator Superfamily KM388_RS13950 PF04226 Transglycosylase associated protein KM388_RS13955 PF01156 Inosine-uridine preferring nucleoside hydrolase KM388_RS13965 PF08241 Methyltransferase domain KM388_RS14000 PF00155 Aminotransferase class I and II KM388_RS14005 PF07977 FabA-like domain KM388_RS14010 PF03630 Fumble KM388_RS14030 PF00005 ABC transporter KM388_RS14075 PF01594 AI-2E family transporter KM388_RS14090 PF00296 Luciferase-like monooxygenase KM388_RS14095 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS14100 PF09084 NMT1/THI5 like KM388_RS14105 PF00005 ABC transporter KM388_RS14125 PF09297 NADH pyrophosphatase zinc ribbon domain KM388_RS14125 PF00293 NUDIX domain KM388_RS14145 PF02522 Aminoglycoside 3-N-acetyltransferase KM388_RS14170 PF13536 Putative multidrug resistance efflux transporter KM388_RS14175 PF12867 DinB superfamily KM388_RS14205 PF01522 Polysaccharide deacetylase KM388_RS14215 PF03741 Integral membrane protein TerC family KM388_RS14220 PF00884 Sulfatase KM388_RS14225 PF00005 ABC transporter KM388_RS14225 PF12848 ABC transporter KM388_RS14240 PF16295 Tetracyclin repressor-like, C-terminal domain KM388_RS14240 PF00440 Bacterial regulatory proteins, tetR family KM388_RS14250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM388_RS14255 PF01842 ACT domain KM388_RS14255 PF02153 Prephenate dehydrogenase KM388_RS14260 PF00155 Aminotransferase class I and II KM388_RS14265 PF01264 Chorismate synthase KM388_RS14270 PF01817 Chorismate mutase type II KM388_RS14270 PF00793 DAHP synthetase I family KM388_RS14290 PF01636 Phosphotransferase enzyme family KM388_RS14305 PF06725 3D domain KM388_RS14305 PF01476 LysM domain KM388_RS14315 PF04542 Sigma-70 region 2 KM388_RS14315 PF08281 Sigma-70, region 4 KM388_RS14335 PF06039 Malate:quinone oxidoreductase (Mqo) KM388_RS14340 PF13407 Periplasmic binding protein domain KM388_RS14345 PF02653 Branched-chain amino acid transport system / permease component KM388_RS14350 PF02653 Branched-chain amino acid transport system / permease component KM388_RS14360 PF00325 Bacterial regulatory proteins, crp family KM388_RS14360 PF04198 Putative sugar-binding domain KM388_RS14365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM388_RS14365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM388_RS14375 PF01791 DeoC/LacD family aldolase KM388_RS14395 PF03992 Antibiotic biosynthesis monooxygenase KM388_RS14415 PF01773 Na+ dependent nucleoside transporter N-terminus KM388_RS14415 PF07662 Na+ dependent nucleoside transporter C-terminus KM388_RS14420 PF00171 Aldehyde dehydrogenase family KM388_RS14425 PF01472 PUA domain KM388_RS14425 PF00696 Amino acid kinase family KM388_RS14430 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM388_RS14430 PF03807 NADP oxidoreductase coenzyme F420-dependent KM388_RS14435 PF01546 Peptidase family M20/M25/M40 KM388_RS14440 PF01614 Bacterial transcriptional regulator KM388_RS14440 PF09339 IclR helix-turn-helix domain KM388_RS14445 PF00324 Amino acid permease KM388_RS14450 PF01139 tRNA-splicing ligase RtcB KM388_RS14455 PF00487 Fatty acid desaturase KM388_RS14460 PF00245 Alkaline phosphatase KM388_RS14465 PF11188 Protein of unknown function (DUF2975) KM388_RS14470 PF13443 Cro/C1-type HTH DNA-binding domain KM388_RS14485 PF10086 YhfC intramembrane metalloprotease KM388_RS14495 PF04397 LytTr DNA-binding domain KM388_RS14495 PF00072 Response regulator receiver domain KM388_RS14505 PF13302 Acetyltransferase (GNAT) domain KM388_RS14510 PF12681 Glyoxalase-like domain KM388_RS14530 PF07726 ATPase family associated with various cellular activities (AAA) KM388_RS14530 PF17863 AAA lid domain KM388_RS14545 PF07690 Major Facilitator Superfamily KM388_RS14575 PF00535 Glycosyl transferase family 2 KM388_RS14585 PF00202 Aminotransferase class-III KM388_RS14590 PF06628 Catalase-related immune-responsive KM388_RS14590 PF00199 Catalase KM388_RS14600 PF13382 Adenine deaminase C-terminal domain KM388_RS14600 PF01979 Amidohydrolase family KM388_RS14605 PF00144 Beta-lactamase KM388_RS14625 PF07726 ATPase family associated with various cellular activities (AAA) KM388_RS14625 PF17863 AAA lid domain KM388_RS14635 PF00881 Nitroreductase family KM388_RS14640 PF01047 MarR family KM388_RS14645 PF00009 Elongation factor Tu GTP binding domain KM388_RS14645 PF03764 Elongation factor G, domain IV KM388_RS14645 PF14492 Elongation Factor G, domain II KM388_RS14645 PF00679 Elongation factor G C-terminus KM388_RS14655 PF00293 NUDIX domain KM388_RS14675 PF00392 Bacterial regulatory proteins, gntR family KM388_RS14685 PF02687 FtsX-like permease family KM388_RS14685 PF12704 MacB-like periplasmic core domain KM388_RS14685 PF00005 ABC transporter KM388_RS14710 PF12833 Helix-turn-helix domain KM388_RS14715 PF00583 Acetyltransferase (GNAT) family KM388_RS14730 PF00892 EamA-like transporter family KM388_RS14735 PF00155 Aminotransferase class I and II KM388_RS14735 PF00392 Bacterial regulatory proteins, gntR family KM388_RS14740 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM388_RS14745 PF13031 Protein of unknown function (DUF3892) KM388_RS14755 PF00672 HAMP domain KM388_RS14755 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS14760 PF00072 Response regulator receiver domain KM388_RS14760 PF00486 Transcriptional regulatory protein, C terminal KM388_RS14765 PF00561 alpha/beta hydrolase fold KM388_RS14795 PF01925 Sulfite exporter TauE/SafE KM388_RS14800 PF13302 Acetyltransferase (GNAT) domain KM388_RS14805 PF00324 Amino acid permease KM388_RS14815 PF08713 DNA alkylation repair enzyme KM388_RS14820 PF10898 Protein of unknown function (DUF2716) KM388_RS14850 PF10502 Signal peptidase, peptidase S26 KM388_RS14855 PF00905 Penicillin binding protein transpeptidase domain KM388_RS14855 PF03717 Penicillin-binding Protein dimerisation domain KM388_RS14865 PF02146 Sir2 family KM388_RS14890 PF03746 LamB/YcsF family KM388_RS14900 PF02682 Carboxyltransferase domain, subdomain C and D KM388_RS14905 PF01614 Bacterial transcriptional regulator KM388_RS14905 PF09339 IclR helix-turn-helix domain KM388_RS14910 PF10502 Signal peptidase, peptidase S26 KM388_RS14915 PF03932 CutC family KM388_RS14920 PF07454 Stage II sporulation protein P (SpoIIP) KM388_RS14935 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM388_RS14935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM388_RS14935 PF02770 Acyl-CoA dehydrogenase, middle domain KM388_RS14950 PF07670 Nucleoside recognition KM388_RS14965 PF02915 Rubrerythrin KM388_RS14975 PF00440 Bacterial regulatory proteins, tetR family KM388_RS14980 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM388_RS14980 PF00391 PEP-utilising enzyme, mobile domain KM388_RS14985 PF00753 Metallo-beta-lactamase superfamily KM388_RS15000 PF07875 Coat F domain KM388_RS15005 PF08892 YqcI/YcgG family KM388_RS15010 PF01810 LysE type translocator KM388_RS15025 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM388_RS15030 PF10710 Protein of unknown function (DUF2512) KM388_RS15035 PF11553 Protein of unknown function (DUF3231) KM388_RS15040 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM388_RS15045 PF00107 Zinc-binding dehydrogenase KM388_RS15045 PF13823 Alcohol dehydrogenase GroES-associated KM388_RS15045 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS15060 PF00206 Lyase KM388_RS15060 PF10415 Fumarase C C-terminus KM388_RS15065 PF00710 Asparaginase, N-terminal KM388_RS15065 PF17763 Glutaminase/Asparaginase C-terminal domain KM388_RS15070 PF01381 Helix-turn-helix KM388_RS15080 PF01541 GIY-YIG catalytic domain KM388_RS15080 PF12826 Helix-hairpin-helix motif KM388_RS15080 PF02151 UvrB/uvrC motif KM388_RS15080 PF08459 UvrC Helix-hairpin-helix N-terminal KM388_RS15085 PF13520 Amino acid permease KM388_RS15090 PF05525 Branched-chain amino acid transport protein KM388_RS15095 PF03807 NADP oxidoreductase coenzyme F420-dependent KM388_RS15095 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM388_RS15100 PF13564 DoxX-like family KM388_RS15105 PF03949 Malic enzyme, NAD binding domain KM388_RS15105 PF00390 Malic enzyme, N-terminal domain KM388_RS15120 PF03845 Spore germination protein KM388_RS15130 PF00072 Response regulator receiver domain KM388_RS15130 PF08664 YcbB domain KM388_RS15140 PF04960 Glutaminase KM388_RS15145 PF01235 Sodium:alanine symporter family KM388_RS15175 PF02872 5'-nucleotidase, C-terminal domain KM388_RS15175 PF00149 Calcineurin-like phosphoesterase KM388_RS15175 PF17936 Bacterial Ig domain KM388_RS15180 PF00199 Catalase KM388_RS15180 PF06628 Catalase-related immune-responsive KM388_RS15185 PF00561 alpha/beta hydrolase fold KM388_RS15190 PF00857 Isochorismatase family KM388_RS15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS15210 PF03466 LysR substrate binding domain KM388_RS15220 PF01544 CorA-like Mg2+ transporter protein KM388_RS15235 PF11181 Heat induced stress protein YflT KM388_RS15255 PF03073 TspO/MBR family KM388_RS15260 PF00875 DNA photolyase KM388_RS15260 PF03441 FAD binding domain of DNA photolyase KM388_RS15270 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM388_RS15275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM388_RS15275 PF00361 Proton-conducting membrane transporter KM388_RS15280 PF10057 Uncharacterized conserved protein (DUF2294) KM388_RS15295 PF01040 UbiA prenyltransferase family KM388_RS15300 PF00561 alpha/beta hydrolase fold KM388_RS15305 PF01297 Zinc-uptake complex component A periplasmic KM388_RS15310 PF00950 ABC 3 transport family KM388_RS15315 PF00005 ABC transporter KM388_RS15340 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM388_RS15345 PF01758 Sodium Bile acid symporter family KM388_RS15350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS15355 PF01022 Bacterial regulatory protein, arsR family KM388_RS15370 PF00012 Hsp70 protein KM388_RS15385 PF01037 Lrp/AsnC ligand binding domain KM388_RS15400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS15420 PF02805 Metal binding domain of Ada KM388_RS15420 PF12833 Helix-turn-helix domain KM388_RS15430 PF00144 Beta-lactamase KM388_RS15455 PF12802 MarR family KM388_RS15460 PF00175 Oxidoreductase NAD-binding domain KM388_RS15460 PF00067 Cytochrome P450 KM388_RS15460 PF00258 Flavodoxin KM388_RS15460 PF00667 FAD binding domain KM388_RS15465 PF07690 Major Facilitator Superfamily KM388_RS15490 PF00072 Response regulator receiver domain KM388_RS15490 PF00486 Transcriptional regulatory protein, C terminal KM388_RS15495 PF00672 HAMP domain KM388_RS15495 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS15495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS15520 PF00291 Pyridoxal-phosphate dependent enzyme KM388_RS15540 PF01381 Helix-turn-helix KM388_RS15555 PF00753 Metallo-beta-lactamase superfamily KM388_RS15560 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM388_RS15570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM388_RS15570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM388_RS15575 PF04072 Leucine carboxyl methyltransferase KM388_RS15590 PF00005 ABC transporter KM388_RS15595 PF02687 FtsX-like permease family KM388_RS15610 PF00672 HAMP domain KM388_RS15610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS15610 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS15615 PF00486 Transcriptional regulatory protein, C terminal KM388_RS15615 PF00072 Response regulator receiver domain KM388_RS15625 PF01047 MarR family KM388_RS15635 PF04299 Putative FMN-binding domain KM388_RS15640 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM388_RS15640 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS15645 PF07690 Major Facilitator Superfamily KM388_RS15650 PF02589 LUD domain KM388_RS15655 PF02589 LUD domain KM388_RS15655 PF13183 4Fe-4S dicluster domain KM388_RS15655 PF11870 Domain of unknown function (DUF3390) KM388_RS15660 PF02754 Cysteine-rich domain KM388_RS15665 PF03466 LysR substrate binding domain KM388_RS15665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS15680 PF17676 LD-carboxypeptidase C-terminal domain KM388_RS15680 PF02016 LD-carboxypeptidase N-terminal domain KM388_RS15705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM388_RS15705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM388_RS15710 PF05116 Sucrose-6F-phosphate phosphohydrolase KM388_RS15720 PF00356 Bacterial regulatory proteins, lacI family KM388_RS15725 PF18801 response regulator aspartate phosphatase H, N terminal KM388_RS15760 PF02743 Cache domain KM388_RS15760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS15760 PF00672 HAMP domain KM388_RS15775 PF01554 MatE KM388_RS15785 PF01752 Collagenase KM388_RS15785 PF08453 Peptidase family M9 N-terminal KM388_RS15785 PF18496 Collagenase G catalytic helper subdomain KM388_RS15795 PF07690 Major Facilitator Superfamily KM388_RS15800 PF00440 Bacterial regulatory proteins, tetR family KM388_RS15800 PF16859 Tetracyclin repressor-like, C-terminal domain KM388_RS15810 PF01022 Bacterial regulatory protein, arsR family KM388_RS15820 PF03313 Serine dehydratase alpha chain KM388_RS15825 PF03315 Serine dehydratase beta chain KM388_RS15825 PF01842 ACT domain KM388_RS15835 PF00202 Aminotransferase class-III KM388_RS15840 PF00708 Acylphosphatase KM388_RS15840 PF17788 HypF Kae1-like domain KM388_RS15840 PF01300 Telomere recombination KM388_RS15840 PF07503 HypF finger KM388_RS15845 PF02769 AIR synthase related protein, C-terminal domain KM388_RS15845 PF00586 AIR synthase related protein, N-terminal domain KM388_RS15855 PF01037 Lrp/AsnC ligand binding domain KM388_RS15860 PF13520 Amino acid permease KM388_RS15880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM388_RS15880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM388_RS15880 PF01842 ACT domain KM388_RS15885 PF00266 Aminotransferase class-V KM388_RS15900 PF04542 Sigma-70 region 2 KM388_RS15900 PF08281 Sigma-70, region 4 KM388_RS15915 PF07883 Cupin domain KM388_RS15920 PF12833 Helix-turn-helix domain KM388_RS15920 PF01497 Periplasmic binding protein KM388_RS15925 PF01804 Penicillin amidase KM388_RS15965 PF14044 NETI protein KM388_RS15970 PF07690 Major Facilitator Superfamily KM388_RS15975 PF12697 Alpha/beta hydrolase family KM388_RS15980 PF01047 MarR family KM388_RS15985 PF07690 Major Facilitator Superfamily KM388_RS15995 PF12679 ABC-2 family transporter protein KM388_RS16000 PF00005 ABC transporter KM388_RS16000 PF13732 Domain of unknown function (DUF4162) KM388_RS16005 PF13396 Phospholipase_D-nuclease N-terminal KM388_RS16015 PF17314 Family of unknown function (DUF5360) KM388_RS16020 PF00893 Small Multidrug Resistance protein KM388_RS16025 PF00440 Bacterial regulatory proteins, tetR family KM388_RS16030 PF17440 Thiol-activated cytolysin beta sandwich domain KM388_RS16030 PF01289 Thiol-activated cytolysin KM388_RS16035 PF02667 Short chain fatty acid transporter KM388_RS16045 PF02525 Flavodoxin-like fold KM388_RS16075 PF00005 ABC transporter KM388_RS16080 PF02361 Cobalt transport protein KM388_RS16095 PF03737 Aldolase/RraA KM388_RS16100 PF03606 C4-dicarboxylate anaerobic carrier KM388_RS16105 PF04231 Endonuclease I KM388_RS16120 PF01381 Helix-turn-helix KM388_RS16125 PF02660 Glycerol-3-phosphate acyltransferase KM388_RS16130 PF04073 Aminoacyl-tRNA editing domain KM388_RS16135 PF03129 Anticodon binding domain KM388_RS16135 PF13393 Histidyl-tRNA synthetase KM388_RS16150 PF01638 HxlR-like helix-turn-helix KM388_RS16155 PF00881 Nitroreductase family KM388_RS16165 PF00391 PEP-utilising enzyme, mobile domain KM388_RS16165 PF00224 Pyruvate kinase, barrel domain KM388_RS16165 PF02887 Pyruvate kinase, alpha/beta domain KM388_RS16185 PF00005 ABC transporter KM388_RS16210 PF13419 Haloacid dehalogenase-like hydrolase KM388_RS16220 PF13350 Tyrosine phosphatase family KM388_RS16245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS16250 PF00480 ROK family KM388_RS16255 PF07690 Major Facilitator Superfamily KM388_RS16260 PF14602 Hexapeptide repeat of succinyl-transferase KM388_RS16260 PF12464 Maltose acetyltransferase KM388_RS16270 PF00005 ABC transporter KM388_RS16270 PF02687 FtsX-like permease family KM388_RS16270 PF12704 MacB-like periplasmic core domain KM388_RS16280 PF00579 tRNA synthetases class I (W and Y) KM388_RS16285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM388_RS16285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM388_RS16285 PF13288 DXP reductoisomerase C-terminal domain KM388_RS16290 PF01594 AI-2E family transporter KM388_RS16310 PF08241 Methyltransferase domain KM388_RS16320 PF07690 Major Facilitator Superfamily KM388_RS16340 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS16350 PF00571 CBS domain KM388_RS16350 PF03471 Transporter associated domain KM388_RS16350 PF01595 Cyclin M transmembrane N-terminal domain KM388_RS16355 PF13411 MerR HTH family regulatory protein KM388_RS16360 PF00892 EamA-like transporter family KM388_RS16365 PF00805 Pentapeptide repeats (8 copies) KM388_RS16370 PF06906 Protein of unknown function (DUF1272) KM388_RS16375 PF10282 Lactonase, 7-bladed beta-propeller KM388_RS16380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM388_RS16380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM388_RS16385 PF02447 GntP family permease KM388_RS16390 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM388_RS16395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM388_RS16395 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM388_RS16400 PF00456 Transketolase, thiamine diphosphate binding domain KM388_RS16400 PF02780 Transketolase, C-terminal domain KM388_RS16400 PF02779 Transketolase, pyrimidine binding domain KM388_RS16410 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM388_RS16410 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM388_RS16415 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS16415 PF00107 Zinc-binding dehydrogenase KM388_RS16420 PF00296 Luciferase-like monooxygenase KM388_RS16430 PF14765 Polyketide synthase dehydratase KM388_RS16430 PF00550 Phosphopantetheine attachment site KM388_RS16430 PF08659 KR domain KM388_RS16430 PF02801 Beta-ketoacyl synthase, C-terminal domain KM388_RS16430 PF00698 Acyl transferase domain KM388_RS16430 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS16430 PF16197 Ketoacyl-synthetase C-terminal extension KM388_RS16430 PF00109 Beta-ketoacyl synthase, N-terminal domain KM388_RS16435 PF00106 short chain dehydrogenase KM388_RS16440 PF07504 Fungalysin/Thermolysin Propeptide Motif KM388_RS16440 PF03413 Peptidase propeptide and YPEB domain KM388_RS16440 PF01447 Thermolysin metallopeptidase, catalytic domain KM388_RS16440 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM388_RS16460 PF00248 Aldo/keto reductase family KM388_RS16465 PF07690 Major Facilitator Superfamily KM388_RS16475 PF03928 Haem-degrading KM388_RS16480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS16510 PF03960 ArsC family KM388_RS16515 PF01638 HxlR-like helix-turn-helix KM388_RS16520 PF00392 Bacterial regulatory proteins, gntR family KM388_RS16520 PF07702 UTRA domain KM388_RS16525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM388_RS16525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM388_RS16535 PF01638 HxlR-like helix-turn-helix KM388_RS16540 PF01638 HxlR-like helix-turn-helix KM388_RS16545 PF00248 Aldo/keto reductase family KM388_RS16575 PF02567 Phenazine biosynthesis-like protein KM388_RS16595 PF13193 AMP-binding enzyme C-terminal domain KM388_RS16595 PF00501 AMP-binding enzyme KM388_RS16605 PF01638 HxlR-like helix-turn-helix KM388_RS16620 PF01022 Bacterial regulatory protein, arsR family KM388_RS16630 PF12791 Anti-sigma factor N-terminus KM388_RS16635 PF04542 Sigma-70 region 2 KM388_RS16650 PF00440 Bacterial regulatory proteins, tetR family KM388_RS16670 PF05656 Protein of unknown function (DUF805) KM388_RS16675 PF01061 ABC-2 type transporter KM388_RS16680 PF00005 ABC transporter KM388_RS16680 PF13732 Domain of unknown function (DUF4162) KM388_RS16695 PF03063 Prismane/CO dehydrogenase family KM388_RS16705 PF00753 Metallo-beta-lactamase superfamily KM388_RS16710 PF01183 Glycosyl hydrolases family 25 KM388_RS16710 PF01471 Putative peptidoglycan binding domain KM388_RS16735 PF00144 Beta-lactamase KM388_RS16775 PF00753 Metallo-beta-lactamase superfamily KM388_RS16780 PF00107 Zinc-binding dehydrogenase KM388_RS16780 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS16785 PF00324 Amino acid permease KM388_RS16790 PF07690 Major Facilitator Superfamily KM388_RS16815 PF02585 GlcNAc-PI de-N-acetylase KM388_RS16820 PF08830 Protein of unknown function (DUF1806) KM388_RS16825 PF03600 Citrate transporter KM388_RS16850 PF01032 FecCD transport family KM388_RS16855 PF01032 FecCD transport family KM388_RS16860 PF05675 Protein of unknown function (DUF817) KM388_RS16865 PF02567 Phenazine biosynthesis-like protein KM388_RS16870 PF13170 Protein of unknown function (DUF4003) KM388_RS16885 PF10901 Protein of unknown function (DUF2690) KM388_RS16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS16895 PF03466 LysR substrate binding domain KM388_RS16900 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS16900 PF00107 Zinc-binding dehydrogenase KM388_RS16915 PF00488 MutS domain V KM388_RS16915 PF01713 Smr domain KM388_RS16930 PF00797 N-acetyltransferase KM388_RS16935 PF08439 Oligopeptidase F KM388_RS16935 PF01432 Peptidase family M3 KM388_RS16940 PF00144 Beta-lactamase KM388_RS16950 PF07690 Major Facilitator Superfamily KM388_RS16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS16955 PF03466 LysR substrate binding domain KM388_RS16970 PF03009 Glycerophosphoryl diester phosphodiesterase family KM388_RS16990 PF01494 FAD binding domain KM388_RS16995 PF01022 Bacterial regulatory protein, arsR family KM388_RS17000 PF08240 Alcohol dehydrogenase GroES-like domain KM388_RS17000 PF00107 Zinc-binding dehydrogenase KM388_RS17005 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM388_RS17020 PF04299 Putative FMN-binding domain KM388_RS17035 PF01758 Sodium Bile acid symporter family KM388_RS17040 PF02913 FAD linked oxidases, C-terminal domain KM388_RS17040 PF01565 FAD binding domain KM388_RS17060 PF00132 Bacterial transferase hexapeptide (six repeats) KM388_RS17065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM388_RS17070 PF00535 Glycosyl transferase family 2 KM388_RS17075 PF00378 Enoyl-CoA hydratase/isomerase KM388_RS17080 PF08453 Peptidase family M9 N-terminal KM388_RS17080 PF01752 Collagenase KM388_RS17080 PF18496 Collagenase G catalytic helper subdomain KM388_RS17085 PF02308 MgtC family KM388_RS17100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS17105 PF04294 VanW like protein KM388_RS17115 PF13037 Domain of unknown function (DUF3898) KM388_RS17115 PF13039 Protein of unknown function (DUF3900) KM388_RS17135 PF00313 'Cold-shock' DNA-binding domain KM388_RS17145 PF00258 Flavodoxin KM388_RS17155 PF00293 NUDIX domain KM388_RS17165 PF00132 Bacterial transferase hexapeptide (six repeats) KM388_RS17175 PF00106 short chain dehydrogenase KM388_RS17195 PF01156 Inosine-uridine preferring nucleoside hydrolase KM388_RS17200 PF00474 Sodium:solute symporter family KM388_RS17210 PF00171 Aldehyde dehydrogenase family KM388_RS17220 PF14151 YfhD-like protein KM388_RS17225 PF13243 Squalene-hopene cyclase C-terminal domain KM388_RS17225 PF13249 Squalene-hopene cyclase N-terminal domain KM388_RS17230 PF02681 Divergent PAP2 family KM388_RS17235 PF00892 EamA-like transporter family KM388_RS17240 PF06961 Protein of unknown function (DUF1294) KM388_RS17255 PF10609 NUBPL iron-transfer P-loop NTPase KM388_RS17265 PF02391 MoaE protein KM388_RS17270 PF00994 Probable molybdopterin binding domain KM388_RS17270 PF03454 MoeA C-terminal region (domain IV) KM388_RS17270 PF03453 MoeA N-terminal region (domain I and II) KM388_RS17275 PF00899 ThiF family KM388_RS17280 PF01226 Formate/nitrite transporter KM388_RS17285 PF04055 Radical SAM superfamily KM388_RS17285 PF06463 Molybdenum Cofactor Synthesis C KM388_RS17290 PF02634 FdhD/NarQ family KM388_RS17295 PF10057 Uncharacterized conserved protein (DUF2294) KM388_RS17300 PF07849 Protein of unknown function (DUF1641) KM388_RS17315 PF03323 Bacillus/Clostridium GerA spore germination protein KM388_RS17355 PF08241 Methyltransferase domain KM388_RS17360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS17365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS17370 PF00375 Sodium:dicarboxylate symporter family KM388_RS17375 PF03816 Cell envelope-related transcriptional attenuator domain KM388_RS17385 PF08281 Sigma-70, region 4 KM388_RS17385 PF04542 Sigma-70 region 2 KM388_RS17405 PF00005 ABC transporter KM388_RS17405 PF13732 Domain of unknown function (DUF4162) KM388_RS17415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM388_RS17415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM388_RS17420 PF03989 DNA gyrase C-terminal domain, beta-propeller KM388_RS17420 PF00521 DNA gyrase/topoisomerase IV, subunit A KM388_RS17425 PF00204 DNA gyrase B KM388_RS17425 PF00986 DNA gyrase B subunit, carboxyl terminus KM388_RS17425 PF01751 Toprim domain KM388_RS17425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS17430 PF13380 CoA binding domain KM388_RS17435 PF13180 PDZ domain KM388_RS17440 PF00072 Response regulator receiver domain KM388_RS17440 PF00486 Transcriptional regulatory protein, C terminal KM388_RS17450 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM388_RS17450 PF03477 ATP cone domain KM388_RS17455 PF02660 Glycerol-3-phosphate acyltransferase KM388_RS17460 PF01521 Iron-sulphur cluster biosynthesis KM388_RS17465 PF03061 Thioesterase superfamily KM388_RS17470 PF01476 LysM domain KM388_RS17470 PF00704 Glycosyl hydrolases family 18 KM388_RS17480 PF08177 Small acid-soluble spore protein N family KM388_RS17485 PF13040 Fur-regulated basic protein B KM388_RS17490 PF01336 OB-fold nucleic acid binding domain KM388_RS17490 PF14579 Helix-hairpin-helix motif KM388_RS17490 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM388_RS17490 PF11490 DNA polymerase III polC-type N-terminus II KM388_RS17490 PF02811 PHP domain KM388_RS17490 PF00929 Exonuclease KM388_RS17490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM388_RS17495 PF00578 AhpC/TSA family KM388_RS17505 PF03412 Peptidase C39 family KM388_RS17505 PF00664 ABC transporter transmembrane region KM388_RS17505 PF00005 ABC transporter KM388_RS17510 PF00330 Aconitase family (aconitate hydratase) KM388_RS17510 PF00694 Aconitase C-terminal domain KM388_RS17520 PF01522 Polysaccharide deacetylase KM388_RS17550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM388_RS17550 PF01411 tRNA synthetases class II (A) KM388_RS17550 PF02272 DHHA1 domain KM388_RS17555 PF00293 NUDIX domain KM388_RS17555 PF13344 Haloacid dehalogenase-like hydrolase KM388_RS17565 PF02803 Thiolase, C-terminal domain KM388_RS17565 PF00108 Thiolase, N-terminal domain KM388_RS17570 PF00501 AMP-binding enzyme KM388_RS17570 PF13193 AMP-binding enzyme C-terminal domain KM388_RS17575 PF02632 BioY family KM388_RS17580 PF13193 AMP-binding enzyme C-terminal domain KM388_RS17580 PF00501 AMP-binding enzyme KM388_RS17600 PF05532 CsbD-like KM388_RS17630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM388_RS17630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS17645 PF01738 Dienelactone hydrolase family KM388_RS17650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS17655 PF00474 Sodium:solute symporter family KM388_RS17660 PF01645 Conserved region in glutamate synthase KM388_RS17665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM388_RS17670 PF02559 CarD-like/TRCF domain KM388_RS17675 PF00491 Arginase family KM388_RS17680 PF01979 Amidohydrolase family KM388_RS17685 PF17392 Urocanase C-terminal domain KM388_RS17685 PF17391 Urocanase N-terminal domain KM388_RS17685 PF01175 Urocanase Rossmann-like domain KM388_RS17690 PF00221 Aromatic amino acid lyase KM388_RS17695 PF09021 HutP KM388_RS17700 PF01209 ubiE/COQ5 methyltransferase family KM388_RS17720 PF11084 Protein of unknown function (DUF2621) KM388_RS17735 PF07301 Protein of unknown function (DUF1453) KM388_RS17740 PF02683 Cytochrome C biogenesis protein transmembrane region KM388_RS17750 PF03466 LysR substrate binding domain KM388_RS17750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS17755 PF03788 LrgA family KM388_RS17760 PF04172 LrgB-like family KM388_RS17785 PF01510 N-acetylmuramoyl-L-alanine amidase KM388_RS17785 PF01471 Putative peptidoglycan binding domain KM388_RS17800 PF00005 ABC transporter KM388_RS17800 PF00664 ABC transporter transmembrane region KM388_RS17805 PF00005 ABC transporter KM388_RS17805 PF00664 ABC transporter transmembrane region KM388_RS17810 PF03672 Uncharacterised protein family (UPF0154) KM388_RS17815 PF10747 Sporulation inhibitor of replication protein SirA KM388_RS17820 PF00456 Transketolase, thiamine diphosphate binding domain KM388_RS17820 PF02780 Transketolase, C-terminal domain KM388_RS17820 PF02779 Transketolase, pyrimidine binding domain KM388_RS17830 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS17835 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS17840 PF00005 ABC transporter KM388_RS17855 PF05979 Bacterial protein of unknown function (DUF896) KM388_RS17860 PF00239 Resolvase, N terminal domain KM388_RS17865 PF00717 Peptidase S24-like KM388_RS17865 PF01726 LexA DNA binding domain KM388_RS17880 PF03551 Transcriptional regulator PadR-like family KM388_RS17920 PF01510 N-acetylmuramoyl-L-alanine amidase KM388_RS17920 PF01476 LysM domain KM388_RS17920 PF01471 Putative peptidoglycan binding domain KM388_RS17925 PF05105 Bacteriophage holin family KM388_RS18070 PF08281 Sigma-70, region 4 KM388_RS18115 PF02511 Thymidylate synthase complementing protein KM388_RS18120 PF00145 C-5 cytosine-specific DNA methylase KM388_RS18195 PF01381 Helix-turn-helix KM388_RS18215 PF00589 Phage integrase family KM388_RS18215 PF02899 Phage integrase, N-terminal SAM-like domain KM388_RS18220 PF03951 Glutamine synthetase, beta-Grasp domain KM388_RS18220 PF00120 Glutamine synthetase, catalytic domain KM388_RS18225 PF13411 MerR HTH family regulatory protein KM388_RS18230 PF06838 Methionine gamma-lyase KM388_RS18235 PF13167 GTP-binding GTPase N-terminal KM388_RS18235 PF01926 50S ribosome-binding GTPase KM388_RS18235 PF16360 GTP-binding GTPase Middle Region KM388_RS18240 PF03458 UPF0126 domain KM388_RS18245 PF00004 ATPase family associated with various cellular activities (AAA) KM388_RS18245 PF17866 AAA lid domain KM388_RS18260 PF17209 Hfq protein KM388_RS18275 PF06725 3D domain KM388_RS18275 PF01476 LysM domain KM388_RS18280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM388_RS18280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM388_RS18285 PF00294 pfkB family carbohydrate kinase KM388_RS18290 PF00455 DeoR C terminal sensor domain KM388_RS18290 PF08220 DeoR-like helix-turn-helix domain KM388_RS18300 PF04238 Protein of unknown function (DUF420) KM388_RS18310 PF00324 Amino acid permease KM388_RS18325 PF00149 Calcineurin-like phosphoesterase KM388_RS18325 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM388_RS18330 PF01226 Formate/nitrite transporter KM388_RS18335 PF00216 Bacterial DNA-binding protein KM388_RS18340 PF00403 Heavy-metal-associated domain KM388_RS18345 PF00403 Heavy-metal-associated domain KM388_RS18350 PF02583 Metal-sensitive transcriptional repressor KM388_RS18360 PF00756 Putative esterase KM388_RS18365 PF00005 ABC transporter KM388_RS18370 PF01032 FecCD transport family KM388_RS18375 PF01032 FecCD transport family KM388_RS18390 PF12833 Helix-turn-helix domain KM388_RS18390 PF02805 Metal binding domain of Ada KM388_RS18395 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM388_RS18395 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM388_RS18400 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM388_RS18400 PF00730 HhH-GPD superfamily base excision DNA repair protein KM388_RS18405 PF07687 Peptidase dimerisation domain KM388_RS18405 PF01546 Peptidase family M20/M25/M40 KM388_RS18425 PF00561 alpha/beta hydrolase fold KM388_RS18430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS18450 PF10787 Uncharacterised protein from bacillus cereus group KM388_RS18455 PF04172 LrgB-like family KM388_RS18460 PF03788 LrgA family KM388_RS18465 PF00155 Aminotransferase class I and II KM388_RS18465 PF00392 Bacterial regulatory proteins, gntR family KM388_RS18470 PF00364 Biotin-requiring enzyme KM388_RS18470 PF00561 alpha/beta hydrolase fold KM388_RS18475 PF02585 GlcNAc-PI de-N-acetylase KM388_RS18490 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM388_RS18495 PF00082 Subtilase family KM388_RS18500 PF07486 Cell Wall Hydrolase KM388_RS18505 PF03275 UDP-galactopyranose mutase KM388_RS18510 PF00884 Sulfatase KM388_RS18515 PF00350 Dynamin family KM388_RS18525 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM388_RS18530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS18530 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS18535 PF00072 Response regulator receiver domain KM388_RS18535 PF00486 Transcriptional regulatory protein, C terminal KM388_RS18550 PF00005 ABC transporter KM388_RS18555 PF01119 DNA mismatch repair protein, C-terminal domain KM388_RS18555 PF08676 MutL C terminal dimerisation domain KM388_RS18560 PF00488 MutS domain V KM388_RS18560 PF05190 MutS family domain IV KM388_RS18560 PF05192 MutS domain III KM388_RS18560 PF05188 MutS domain II KM388_RS18560 PF01624 MutS domain I KM388_RS18565 PF10628 Outer spore coat protein E (CotE) KM388_RS18570 PF06133 Control of competence regulator ComK, YlbF/YmcA KM388_RS18575 PF04055 Radical SAM superfamily KM388_RS18575 PF01938 TRAM domain KM388_RS18575 PF00919 Uncharacterized protein family UPF0004 KM388_RS18580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM388_RS18585 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM388_RS18585 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM388_RS18585 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM388_RS18590 PF01244 Membrane dipeptidase (Peptidase family M19) KM388_RS18595 PF04232 Stage V sporulation protein S (SpoVS) KM388_RS18600 PF13277 YmdB-like protein KM388_RS18605 PF00013 KH domain KM388_RS18605 PF12072 Domain of unknown function (DUF3552) KM388_RS18605 PF01966 HD domain KM388_RS18620 PF00994 Probable molybdopterin binding domain KM388_RS18620 PF18146 Damage-inducible protein CinA KH domain KM388_RS18620 PF02464 Competence-damaged protein KM388_RS18625 PF01066 CDP-alcohol phosphatidyltransferase KM388_RS18630 PF13464 Domain of unknown function (DUF4115) KM388_RS18635 PF11868 Protein of unknown function (DUF3388) KM388_RS18640 PF11588 Protein of unknown function (DUF3243) KM388_RS18650 PF00675 Insulinase (Peptidase family M16) KM388_RS18650 PF05193 Peptidase M16 inactive domain KM388_RS18655 PF05193 Peptidase M16 inactive domain KM388_RS18660 PF02653 Branched-chain amino acid transport system / permease component KM388_RS18670 PF00005 ABC transporter KM388_RS18675 PF02608 ABC transporter substrate-binding protein PnrA-like KM388_RS18680 PF00392 Bacterial regulatory proteins, gntR family KM388_RS18680 PF07702 UTRA domain KM388_RS18685 PF17854 FtsK alpha domain KM388_RS18685 PF09397 Ftsk gamma domain KM388_RS18685 PF01580 FtsK/SpoIIIE family KM388_RS18690 PF14035 YlzJ-like protein KM388_RS18695 PF00574 Clp protease KM388_RS18700 PF17770 Ribonuclease J C-terminal domain KM388_RS18700 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM388_RS18700 PF00753 Metallo-beta-lactamase superfamily KM388_RS18705 PF00701 Dihydrodipicolinate synthetase family KM388_RS18710 PF13840 ACT domain KM388_RS18710 PF00696 Amino acid kinase family KM388_RS18715 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM388_RS18715 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM388_RS18720 PF02441 Flavoprotein KM388_RS18725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM388_RS18725 PF16924 Dipicolinate synthase subunit A N-terminal domain KM388_RS18730 PF05239 PRC-barrel domain KM388_RS18735 PF05193 Peptidase M16 inactive domain KM388_RS18735 PF00675 Insulinase (Peptidase family M16) KM388_RS18740 PF01522 Polysaccharide deacetylase KM388_RS18745 PF00013 KH domain KM388_RS18745 PF01138 3' exoribonuclease family, domain 1 KM388_RS18745 PF03725 3' exoribonuclease family, domain 2 KM388_RS18745 PF00575 S1 RNA binding domain KM388_RS18745 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM388_RS18750 PF00312 Ribosomal protein S15 KM388_RS18755 PF06574 FAD synthetase KM388_RS18755 PF01687 Riboflavin kinase KM388_RS18760 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM388_RS18760 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM388_RS18765 PF02033 Ribosome-binding factor A KM388_RS18770 PF04456 Protein of unknown function (DUF503) KM388_RS18775 PF04760 Translation initiation factor IF-2, N-terminal region KM388_RS18775 PF00009 Elongation factor Tu GTP binding domain KM388_RS18775 PF11987 Translation-initiation factor 2 KM388_RS18780 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM388_RS18785 PF04296 Protein of unknown function (DUF448) KM388_RS18790 PF08529 NusA N-terminal domain KM388_RS18790 PF00575 S1 RNA binding domain KM388_RS18790 PF13184 NusA-like KH domain KM388_RS18795 PF17384 RimP C-terminal SH3 domain KM388_RS18795 PF02576 RimP N-terminal domain KM388_RS18800 PF11490 DNA polymerase III polC-type N-terminus II KM388_RS18800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM388_RS18800 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM388_RS18800 PF02811 PHP domain KM388_RS18800 PF14480 DNA polymerase III polC-type N-terminus I KM388_RS18800 PF00929 Exonuclease KM388_RS18800 PF14579 Helix-hairpin-helix motif KM388_RS18805 PF03129 Anticodon binding domain KM388_RS18805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM388_RS18805 PF04073 Aminoacyl-tRNA editing domain KM388_RS18810 PF02163 Peptidase family M50 KM388_RS18810 PF17820 PDZ domain KM388_RS18815 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM388_RS18815 PF13288 DXP reductoisomerase C-terminal domain KM388_RS18815 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM388_RS18825 PF01255 Putative undecaprenyl diphosphate synthase KM388_RS18830 PF01765 Ribosome recycling factor KM388_RS18835 PF00696 Amino acid kinase family KM388_RS18840 PF00889 Elongation factor TS KM388_RS18845 PF00318 Ribosomal protein S2 KM388_RS18850 PF06018 CodY GAF-like domain KM388_RS18850 PF08222 CodY helix-turn-helix domain KM388_RS18855 PF07724 AAA domain (Cdc48 subfamily) KM388_RS18855 PF10431 C-terminal, D2-small domain, of ClpB protein KM388_RS18855 PF00004 ATPase family associated with various cellular activities (AAA) KM388_RS18860 PF00227 Proteasome subunit KM388_RS18865 PF02899 Phage integrase, N-terminal SAM-like domain KM388_RS18865 PF00589 Phage integrase family KM388_RS18870 PF01134 Glucose inhibited division protein A KM388_RS18875 PF01131 DNA topoisomerase KM388_RS18875 PF01751 Toprim domain KM388_RS18875 PF01396 Topoisomerase DNA binding C4 zinc finger KM388_RS18885 PF02629 CoA binding domain KM388_RS18885 PF00549 CoA-ligase KM388_RS18890 PF08442 ATP-grasp domain KM388_RS18890 PF00549 CoA-ligase KM388_RS18895 PF01351 Ribonuclease HII KM388_RS18900 PF01926 50S ribosome-binding GTPase KM388_RS18905 PF10502 Signal peptidase, peptidase S26 KM388_RS18910 PF01245 Ribosomal protein L19 KM388_RS18915 PF01746 tRNA (Guanine-1)-methyltransferase KM388_RS18920 PF05239 PRC-barrel domain KM388_RS18920 PF01782 RimM N-terminal domain KM388_RS18930 PF00886 Ribosomal protein S16 KM388_RS18935 PF02978 Signal peptide binding domain KM388_RS18935 PF00448 SRP54-type protein, GTPase domain KM388_RS18935 PF02881 SRP54-type protein, helical bundle domain KM388_RS18940 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM388_RS18945 PF02881 SRP54-type protein, helical bundle domain KM388_RS18945 PF00448 SRP54-type protein, GTPase domain KM388_RS18950 PF02463 RecF/RecN/SMC N terminal domain KM388_RS18950 PF06470 SMC proteins Flexible Hinge Domain KM388_RS18955 PF14622 Ribonuclease-III-like KM388_RS18955 PF00035 Double-stranded RNA binding motif KM388_RS18960 PF00550 Phosphopantetheine attachment site KM388_RS18970 PF00698 Acyl transferase domain KM388_RS18975 PF02504 Fatty acid synthesis protein KM388_RS18980 PF03061 Thioesterase superfamily KM388_RS18985 PF00270 DEAD/DEAH box helicase KM388_RS18985 PF00271 Helicase conserved C-terminal domain KM388_RS18985 PF17191 RecG wedge domain KM388_RS18990 PF13684 Dihydroxyacetone kinase family KM388_RS18990 PF02734 DAK2 domain KM388_RS18995 PF03780 Asp23 family, cell envelope-related function KM388_RS19000 PF00830 Ribosomal L28 family KM388_RS19005 PF08183 Stage V sporulation protein family KM388_RS19010 PF04263 Thiamin pyrophosphokinase, catalytic domain KM388_RS19010 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM388_RS19015 PF00834 Ribulose-phosphate 3 epimerase family KM388_RS19020 PF16745 RsgA N-terminal domain KM388_RS19020 PF03193 RsgA GTPase KM388_RS19025 PF00069 Protein kinase domain KM388_RS19025 PF03793 PASTA domain KM388_RS19035 PF04055 Radical SAM superfamily KM388_RS19040 PF01029 NusB family KM388_RS19040 PF01189 16S rRNA methyltransferase RsmB/F KM388_RS19045 PF02911 Formyl transferase, C-terminal domain KM388_RS19045 PF00551 Formyl transferase KM388_RS19050 PF01327 Polypeptide deformylase KM388_RS19055 PF00271 Helicase conserved C-terminal domain KM388_RS19055 PF17764 3′ DNA-binding domain (3′BD) KM388_RS19055 PF18074 Primosomal protein N C-terminal domain KM388_RS19055 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM388_RS19055 PF04851 Type III restriction enzyme, res subunit KM388_RS19060 PF02441 Flavoprotein KM388_RS19060 PF04127 DNA / pantothenate metabolism flavoprotein KM388_RS19065 PF01192 RNA polymerase Rpb6 KM388_RS19070 PF00625 Guanylate kinase KM388_RS19075 PF04025 Domain of unknown function (DUF370) KM388_RS19080 PF08340 Domain of unknown function (DUF1732) KM388_RS19080 PF03755 YicC-like family, N-terminal region KM388_RS19085 PF00690 Cation transporter/ATPase, N-terminus KM388_RS19085 PF00689 Cation transporting ATPase, C-terminus KM388_RS19090 PF05670 NFACT protein RNA binding domain KM388_RS19095 PF01321 Creatinase/Prolidase N-terminal domain KM388_RS19095 PF00557 Metallopeptidase family M24 KM388_RS19125 PF00156 Phosphoribosyl transferase domain KM388_RS19130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM388_RS19135 PF01180 Dihydroorotate dehydrogenase KM388_RS19140 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM388_RS19140 PF00175 Oxidoreductase NAD-binding domain KM388_RS19145 PF02142 MGS-like domain KM388_RS19145 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM388_RS19145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM388_RS19150 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM388_RS19150 PF00117 Glutamine amidotransferase class-I KM388_RS19155 PF01979 Amidohydrolase family KM388_RS19160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM388_RS19160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM388_RS19165 PF00860 Permease family KM388_RS19170 PF00156 Phosphoribosyl transferase domain KM388_RS19175 PF00849 RNA pseudouridylate synthase KM388_RS19175 PF01479 S4 domain KM388_RS19180 PF01252 Signal peptidase (SPase) II KM388_RS19190 PF06827 Zinc finger found in FPG and IleRS KM388_RS19190 PF00133 tRNA synthetases class I (I, L, M and V) KM388_RS19190 PF08264 Anticodon-binding domain of tRNA KM388_RS19195 PF05103 DivIVA protein KM388_RS19200 PF01479 S4 domain KM388_RS19200 PF17774 Putative RNA-binding domain in YlmH KM388_RS19205 PF02325 YGGT family KM388_RS19210 PF04472 Cell division protein SepF KM388_RS19215 PF01168 Alanine racemase, N-terminal domain KM388_RS19220 PF02578 Multi-copper polyphenol oxidoreductase laccase KM388_RS19225 PF05239 PRC-barrel domain KM388_RS19230 PF04542 Sigma-70 region 2 KM388_RS19230 PF04539 Sigma-70 region 3 KM388_RS19230 PF04545 Sigma-70, region 4 KM388_RS19235 PF04545 Sigma-70, region 4 KM388_RS19235 PF04542 Sigma-70 region 2 KM388_RS19240 PF03419 Sporulation factor SpoIIGA KM388_RS19245 PF00091 Tubulin/FtsZ family, GTPase domain KM388_RS19245 PF12327 FtsZ family, C-terminal domain KM388_RS19250 PF02491 SHS2 domain inserted in FTSA KM388_RS19255 PF03799 Cell division protein FtsQ KM388_RS19255 PF08478 POTRA domain, FtsQ-type KM388_RS19260 PF01565 FAD binding domain KM388_RS19260 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM388_RS19265 PF03033 Glycosyltransferase family 28 N-terminal domain KM388_RS19265 PF04101 Glycosyltransferase family 28 C-terminal domain KM388_RS19270 PF01098 Cell cycle protein KM388_RS19275 PF02875 Mur ligase family, glutamate ligase domain KM388_RS19275 PF08245 Mur ligase middle domain KM388_RS19280 PF00953 Glycosyl transferase family 4 KM388_RS19280 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM388_RS19285 PF01225 Mur ligase family, catalytic domain KM388_RS19285 PF02875 Mur ligase family, glutamate ligase domain KM388_RS19285 PF08245 Mur ligase middle domain KM388_RS19290 PF00905 Penicillin binding protein transpeptidase domain KM388_RS19290 PF03793 PASTA domain KM388_RS19290 PF03717 Penicillin-binding Protein dimerisation domain KM388_RS19295 PF03793 PASTA domain KM388_RS19295 PF00905 Penicillin binding protein transpeptidase domain KM388_RS19295 PF03717 Penicillin-binding Protein dimerisation domain KM388_RS19300 PF04977 Septum formation initiator KM388_RS19305 PF01795 MraW methylase family KM388_RS19310 PF10079 Bacillithiol biosynthesis BshC KM388_RS19315 PF02558 Ketopantoate reductase PanE/ApbA KM388_RS19315 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM388_RS19320 PF00583 Acetyltransferase (GNAT) family KM388_RS19330 PF01783 Ribosomal L32p protein family KM388_RS19335 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM388_RS19380 PF12123 N-acetylmuramoyl-l-alanine amidase KM388_RS19380 PF01510 N-acetylmuramoyl-L-alanine amidase KM388_RS19385 PF05105 Bacteriophage holin family KM388_RS19465 PF00574 Clp protease KM388_RS19475 PF03354 Phage Terminase KM388_RS19495 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM388_RS19500 PF00589 Phage integrase family KM388_RS19565 PF00692 dUTPase KM388_RS19585 PF04539 Sigma-70 region 3 KM388_RS19585 PF04545 Sigma-70, region 4 KM388_RS19585 PF04542 Sigma-70 region 2 KM388_RS19610 PF01695 IstB-like ATP binding protein KM388_RS19610 PF07319 Primosomal protein DnaI N-terminus KM388_RS19635 PF01381 Helix-turn-helix KM388_RS19650 PF01381 Helix-turn-helix KM388_RS19665 PF00589 Phage integrase family KM388_RS19665 PF14659 Phage integrase, N-terminal SAM-like domain KM388_RS19670 PF05636 HIGH Nucleotidyl Transferase KM388_RS19675 PF05362 Lon protease (S16) C-terminal proteolytic domain KM388_RS19675 PF13180 PDZ domain KM388_RS19680 PF01734 Patatin-like phospholipase KM388_RS19685 PF07670 Nucleoside recognition KM388_RS19690 PF01467 Cytidylyltransferase-like KM388_RS19705 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM388_RS19710 PF06133 Control of competence regulator ComK, YlbF/YmcA KM388_RS19715 PF00300 Histidine phosphatase superfamily (branch 1) KM388_RS19720 PF14003 YlbE-like protein KM388_RS19725 PF14071 Putative coat protein KM388_RS19730 PF00188 Cysteine-rich secretory protein family KM388_RS19730 PF14504 CAP-associated N-terminal KM388_RS19735 PF08868 YugN-like family KM388_RS19740 PF00795 Carbon-nitrogen hydrolase KM388_RS19745 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM388_RS19750 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM388_RS19755 PF00510 Cytochrome c oxidase subunit III KM388_RS19760 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM388_RS19765 PF00034 Cytochrome c KM388_RS19765 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM388_RS19765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM388_RS19770 PF01040 UbiA prenyltransferase family KM388_RS19775 PF02628 Cytochrome oxidase assembly protein KM388_RS19780 PF02785 Biotin carboxylase C-terminal domain KM388_RS19780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM388_RS19780 PF00682 HMGL-like KM388_RS19780 PF02436 Conserved carboxylase domain KM388_RS19780 PF00364 Biotin-requiring enzyme KM388_RS19780 PF00289 Biotin carboxylase, N-terminal domain KM388_RS19785 PF01098 Cell cycle protein KM388_RS19790 PF07408 Protein of unknown function (DUF1507) KM388_RS19800 PF02562 PhoH-like protein KM388_RS19800 PF13638 PIN domain KM388_RS19810 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM388_RS19820 PF14036 YlaH-like protein KM388_RS19825 PF14492 Elongation Factor G, domain II KM388_RS19825 PF00009 Elongation factor Tu GTP binding domain KM388_RS19825 PF03144 Elongation factor Tu domain 2 KM388_RS19825 PF00679 Elongation factor G C-terminus KM388_RS19835 PF00459 Inositol monophosphatase family KM388_RS19845 PF06335 Protein of unknown function (DUF1054) KM388_RS19850 PF05256 Uncharacterised protein family (UPF0223) KM388_RS19855 PF01276 Orn/Lys/Arg decarboxylase, major domain KM388_RS19855 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM388_RS19895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM388_RS19895 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS19900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM388_RS19900 PF00364 Biotin-requiring enzyme KM388_RS19900 PF02817 e3 binding domain KM388_RS19905 PF02780 Transketolase, C-terminal domain KM388_RS19905 PF02779 Transketolase, pyrimidine binding domain KM388_RS19910 PF00676 Dehydrogenase E1 component KM388_RS19920 PF01327 Polypeptide deformylase KM388_RS19930 PF07288 Protein of unknown function (DUF1447) KM388_RS19935 PF17770 Ribonuclease J C-terminal domain KM388_RS19935 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM388_RS19935 PF00753 Metallo-beta-lactamase superfamily KM388_RS19940 PF02254 TrkA-N domain KM388_RS19940 PF02080 TrkA-C domain KM388_RS19950 PF07687 Peptidase dimerisation domain KM388_RS19950 PF01546 Peptidase family M20/M25/M40 KM388_RS19955 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM388_RS19955 PF00132 Bacterial transferase hexapeptide (six repeats) KM388_RS19955 PF14602 Hexapeptide repeat of succinyl-transferase KM388_RS19960 PF03466 LysR substrate binding domain KM388_RS19960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS19975 PF04308 Ribonuclease H-like KM388_RS19985 PF08796 Protein of unknown function (DUF1797) KM388_RS20000 PF10388 EAL-domain associated signalling protein domain KM388_RS20000 PF00563 EAL domain KM388_RS20010 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM388_RS20010 PF00149 Calcineurin-like phosphoesterase KM388_RS20025 PF02541 Ppx/GppA phosphatase family KM388_RS20030 PF14177 YkyB-like protein KM388_RS20055 PF07690 Major Facilitator Superfamily KM388_RS20065 PF08267 Cobalamin-independent synthase, N-terminal domain KM388_RS20065 PF01717 Cobalamin-independent synthase, Catalytic domain KM388_RS20075 PF14040 Deoxyribonuclease NucA/NucB KM388_RS20085 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS20085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS20095 PF00155 Aminotransferase class I and II KM388_RS20100 PF00356 Bacterial regulatory proteins, lacI family KM388_RS20100 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM388_RS20105 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS20110 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS20115 PF13416 Bacterial extracellular solute-binding protein KM388_RS20120 PF02903 Alpha amylase, N-terminal ig-like domain KM388_RS20120 PF16657 Maltogenic Amylase, C-terminal domain KM388_RS20120 PF00128 Alpha amylase, catalytic domain KM388_RS20125 PF00128 Alpha amylase, catalytic domain KM388_RS20125 PF16657 Maltogenic Amylase, C-terminal domain KM388_RS20130 PF00005 ABC transporter KM388_RS20130 PF17912 MalK OB fold domain KM388_RS20130 PF03459 TOBE domain KM388_RS20170 PF02803 Thiolase, C-terminal domain KM388_RS20170 PF00108 Thiolase, N-terminal domain KM388_RS20175 PF00293 NUDIX domain KM388_RS20205 PF03551 Transcriptional regulator PadR-like family KM388_RS20220 PF01008 Initiation factor 2 subunit family KM388_RS20225 PF01636 Phosphotransferase enzyme family KM388_RS20230 PF00795 Carbon-nitrogen hydrolase KM388_RS20235 PF00155 Aminotransferase class I and II KM388_RS20240 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM388_RS20240 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM388_RS20250 PF00596 Class II Aldolase and Adducin N-terminal domain KM388_RS20255 PF03079 ARD/ARD' family KM388_RS20275 PF00990 Diguanylate cyclase, GGDEF domain KM388_RS20275 PF08448 PAS fold KM388_RS20280 PF00881 Nitroreductase family KM388_RS20295 PF05524 PEP-utilising enzyme, N-terminal KM388_RS20295 PF00391 PEP-utilising enzyme, mobile domain KM388_RS20295 PF02896 PEP-utilising enzyme, TIM barrel domain KM388_RS20300 PF00381 PTS HPr component phosphorylation site KM388_RS20305 PF00367 phosphotransferase system, EIIB KM388_RS20305 PF02378 Phosphotransferase system, EIIC KM388_RS20305 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM388_RS20310 PF03123 CAT RNA binding domain KM388_RS20310 PF00874 PRD domain KM388_RS20320 PF00392 Bacterial regulatory proteins, gntR family KM388_RS20320 PF07702 UTRA domain KM388_RS20325 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM388_RS20330 PF01979 Amidohydrolase family KM388_RS20340 PF04079 Segregation and condensation complex subunit ScpB KM388_RS20345 PF02616 Segregation and condensation protein ScpA KM388_RS20355 PF03745 Domain of unknown function (DUF309) KM388_RS20360 PF00583 Acetyltransferase (GNAT) family KM388_RS20370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM388_RS20375 PF06207 Protein of unknown function (DUF1002) KM388_RS20385 PF03323 Bacillus/Clostridium GerA spore germination protein KM388_RS20390 PF14097 Stage V sporulation protein AE1 KM388_RS20395 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM388_RS20400 PF07451 Stage V sporulation protein AD (SpoVAD) KM388_RS20405 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM388_RS20410 PF13782 Stage V sporulation protein AB KM388_RS20415 PF12164 Stage V sporulation protein AA KM388_RS20425 PF00209 Sodium:neurotransmitter symporter family KM388_RS20430 PF04542 Sigma-70 region 2 KM388_RS20430 PF04539 Sigma-70 region 3 KM388_RS20430 PF04545 Sigma-70, region 4 KM388_RS20435 PF13581 Histidine kinase-like ATPase domain KM388_RS20440 PF01740 STAS domain KM388_RS20445 PF00768 D-alanyl-D-alanine carboxypeptidase KM388_RS20445 PF07943 Penicillin-binding protein 5, C-terminal domain KM388_RS20450 PF00392 Bacterial regulatory proteins, gntR family KM388_RS20455 PF00005 ABC transporter KM388_RS20470 PF01047 MarR family KM388_RS20480 PF00860 Permease family KM388_RS20485 PF01544 CorA-like Mg2+ transporter protein KM388_RS20490 PF02885 Glycosyl transferase family, helical bundle domain KM388_RS20490 PF00591 Glycosyl transferase family, a/b domain KM388_RS20490 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM388_RS20495 PF01048 Phosphorylase superfamily KM388_RS20500 PF01676 Metalloenzyme superfamily KM388_RS20510 PF02899 Phage integrase, N-terminal SAM-like domain KM388_RS20510 PF00589 Phage integrase family KM388_RS20515 PF14004 Protein of unknown function (DUF4227) KM388_RS20520 PF01475 Ferric uptake regulator family KM388_RS20525 PF01944 Stage II sporulation protein M KM388_RS20535 PF00293 NUDIX domain KM388_RS20540 PF13072 Mother cell inhibitor of FtsZ KM388_RS20545 PF00248 Aldo/keto reductase family KM388_RS20550 PF00248 Aldo/keto reductase family KM388_RS20555 PF04229 GrpB protein KM388_RS20555 PF13673 Acetyltransferase (GNAT) domain KM388_RS20565 PF02872 5'-nucleotidase, C-terminal domain KM388_RS20565 PF00746 LPXTG cell wall anchor motif KM388_RS20565 PF00149 Calcineurin-like phosphoesterase KM388_RS20565 PF00565 Staphylococcal nuclease homologue KM388_RS20575 PF12146 Serine aminopeptidase, S33 KM388_RS20580 PF13726 Na+-H+ antiporter family KM388_RS20580 PF03553 Na+/H+ antiporter family KM388_RS20585 PF00356 Bacterial regulatory proteins, lacI family KM388_RS20590 PF00583 Acetyltransferase (GNAT) family KM388_RS20595 PF12146 Serine aminopeptidase, S33 KM388_RS20600 PF10827 Protein of unknown function (DUF2552) KM388_RS20610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM388_RS20610 PF01872 RibD C-terminal domain KM388_RS20615 PF00677 Lumazine binding domain KM388_RS20620 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM388_RS20620 PF00925 GTP cyclohydrolase II KM388_RS20625 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM388_RS20635 PF06968 Biotin and Thiamin Synthesis associated domain KM388_RS20635 PF04055 Radical SAM superfamily KM388_RS20640 PF13847 Methyltransferase domain KM388_RS20645 PF12697 Alpha/beta hydrolase family KM388_RS20645 PF08241 Methyltransferase domain KM388_RS20650 PF00155 Aminotransferase class I and II KM388_RS20660 PF00202 Aminotransferase class-III KM388_RS20670 PF03553 Na+/H+ antiporter family KM388_RS20675 PF00149 Calcineurin-like phosphoesterase KM388_RS20675 PF02872 5'-nucleotidase, C-terminal domain KM388_RS20685 PF01037 Lrp/AsnC ligand binding domain KM388_RS20685 PF13404 AsnC-type helix-turn-helix domain KM388_RS20700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM388_RS20700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM388_RS20705 PF00202 Aminotransferase class-III KM388_RS20710 PF00696 Amino acid kinase family KM388_RS20715 PF01960 ArgJ family KM388_RS20720 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM388_RS20720 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM388_RS20730 PF00106 short chain dehydrogenase KM388_RS20735 PF00753 Metallo-beta-lactamase superfamily KM388_RS20740 PF03807 NADP oxidoreductase coenzyme F420-dependent KM388_RS20740 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM388_RS20745 PF03313 Serine dehydratase alpha chain KM388_RS20750 PF03315 Serine dehydratase beta chain KM388_RS20750 PF01842 ACT domain KM388_RS20760 PF12706 Beta-lactamase superfamily domain KM388_RS20760 PF00753 Metallo-beta-lactamase superfamily KM388_RS20770 PF00817 impB/mucB/samB family KM388_RS20770 PF11799 impB/mucB/samB family C-terminal domain KM388_RS20770 PF11798 IMS family HHH motif KM388_RS20780 PF07687 Peptidase dimerisation domain KM388_RS20780 PF01546 Peptidase family M20/M25/M40 KM388_RS20785 PF13302 Acetyltransferase (GNAT) domain KM388_RS20800 PF03734 L,D-transpeptidase catalytic domain KM388_RS20805 PF11728 Putative aromatic acid exporter C-terminal domain KM388_RS20805 PF06081 Aromatic acid exporter family member 1 KM388_RS20810 PF00005 ABC transporter KM388_RS20815 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS20820 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM388_RS20825 PF06491 Disulphide isomerase KM388_RS20830 PF11208 Protein of unknown function (DUF2992) KM388_RS20835 PF00293 NUDIX domain KM388_RS20835 PF09297 NADH pyrophosphatase zinc ribbon domain KM388_RS20840 PF01098 Cell cycle protein KM388_RS20845 PF02817 e3 binding domain KM388_RS20845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM388_RS20845 PF00364 Biotin-requiring enzyme KM388_RS20850 PF02779 Transketolase, pyrimidine binding domain KM388_RS20850 PF02780 Transketolase, C-terminal domain KM388_RS20855 PF00676 Dehydrogenase E1 component KM388_RS20860 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS20860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM388_RS20865 PF00871 Acetokinase family KM388_RS20870 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM388_RS20870 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM388_RS20875 PF01515 Phosphate acetyl/butaryl transferase KM388_RS20880 PF00158 Sigma-54 interaction domain KM388_RS20880 PF00989 PAS fold KM388_RS20880 PF02954 Bacterial regulatory protein, Fis family KM388_RS20890 PF03009 Glycerophosphoryl diester phosphodiesterase family KM388_RS20895 PF14174 YycC-like protein KM388_RS20905 PF00072 Response regulator receiver domain KM388_RS20905 PF08769 Sporulation initiation factor Spo0A C terminal KM388_RS20910 PF17820 PDZ domain KM388_RS20910 PF05580 SpoIVB peptidase S55 KM388_RS20915 PF13476 AAA domain KM388_RS20920 PF01316 Arginine repressor, DNA binding domain KM388_RS20920 PF02863 Arginine repressor, C-terminal domain KM388_RS20925 PF01479 S4 domain KM388_RS20925 PF01728 FtsJ-like methyltransferase KM388_RS20930 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM388_RS20930 PF02779 Transketolase, pyrimidine binding domain KM388_RS20930 PF02780 Transketolase, C-terminal domain KM388_RS20935 PF00348 Polyprenyl synthetase KM388_RS20940 PF02609 Exonuclease VII small subunit KM388_RS20945 PF02601 Exonuclease VII, large subunit KM388_RS20945 PF13742 OB-fold nucleic acid binding domain KM388_RS20950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM388_RS20950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM388_RS20955 PF01029 NusB family KM388_RS20960 PF03780 Asp23 family, cell envelope-related function KM388_RS20965 PF02785 Biotin carboxylase C-terminal domain KM388_RS20965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM388_RS20965 PF00289 Biotin carboxylase, N-terminal domain KM388_RS20970 PF00364 Biotin-requiring enzyme KM388_RS20980 PF12685 SpoIIIAH-like protein KM388_RS20990 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM388_RS20995 PF09546 Stage III sporulation protein AE (spore_III_AE) KM388_RS21000 PF06686 Stage III sporulation protein AC/AD protein family KM388_RS21005 PF06686 Stage III sporulation protein AC/AD protein family KM388_RS21010 PF09548 Stage III sporulation protein AB (spore_III_AB) KM388_RS21035 PF01132 Elongation factor P (EF-P) OB domain KM388_RS21035 PF08207 Elongation factor P (EF-P) KOW-like domain KM388_RS21035 PF09285 Elongation factor P, C-terminal KM388_RS21040 PF01321 Creatinase/Prolidase N-terminal domain KM388_RS21040 PF00557 Metallopeptidase family M24 KM388_RS21045 PF01220 Dehydroquinase class II KM388_RS21050 PF11085 Conserved membrane protein YqhR KM388_RS21055 PF07136 Protein of unknown function (DUF1385) KM388_RS21065 PF13419 Haloacid dehalogenase-like hydrolase KM388_RS21070 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM388_RS21070 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM388_RS21085 PF03099 Biotin/lipoate A/B protein ligase family KM388_RS21090 PF00581 Rhodanese-like domain KM388_RS21095 PF00356 Bacterial regulatory proteins, lacI family KM388_RS21095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM388_RS21105 PF00893 Small Multidrug Resistance protein KM388_RS21110 PF00893 Small Multidrug Resistance protein KM388_RS21145 PF00005 ABC transporter KM388_RS21150 PF00392 Bacterial regulatory proteins, gntR family KM388_RS21165 PF02347 Glycine cleavage system P-protein KM388_RS21170 PF02347 Glycine cleavage system P-protein KM388_RS21175 PF01571 Aminomethyltransferase folate-binding domain KM388_RS21175 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM388_RS21180 PF00271 Helicase conserved C-terminal domain KM388_RS21180 PF00176 SNF2 family N-terminal domain KM388_RS21185 PF11079 Bacterial protein YqhG of unknown function KM388_RS21205 PF14038 YqzE-like protein KM388_RS21210 PF01202 Shikimate kinase KM388_RS21235 PF07963 Prokaryotic N-terminal methylation motif KM388_RS21240 PF07963 Prokaryotic N-terminal methylation motif KM388_RS21245 PF00482 Type II secretion system (T2SS), protein F KM388_RS21250 PF00437 Type II/IV secretion system protein KM388_RS21260 PF11117 Protein of unknown function (DUF2626) KM388_RS21265 PF00375 Sodium:dicarboxylate symporter family KM388_RS21300 PF04101 Glycosyltransferase family 28 C-terminal domain KM388_RS21300 PF03033 Glycosyltransferase family 28 N-terminal domain KM388_RS21310 PF02219 Methylenetetrahydrofolate reductase KM388_RS21310 PF02574 Homocysteine S-methyltransferase KM388_RS21315 PF01053 Cys/Met metabolism PLP-dependent enzyme KM388_RS21320 PF01053 Cys/Met metabolism PLP-dependent enzyme KM388_RS21330 PF01022 Bacterial regulatory protein, arsR family KM388_RS21340 PF00753 Metallo-beta-lactamase superfamily KM388_RS21345 PF10958 Protein of unknown function (DUF2759) KM388_RS21350 PF00480 ROK family KM388_RS21355 PF06014 Bacterial protein of unknown function (DUF910) KM388_RS21360 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM388_RS21365 PF00471 Ribosomal protein L33 KM388_RS21370 PF00483 Nucleotidyl transferase KM388_RS21375 PF01895 PhoU domain KM388_RS21380 PF00005 ABC transporter KM388_RS21385 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS21390 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS21395 PF12849 PBP superfamily domain KM388_RS21400 PF03717 Penicillin-binding Protein dimerisation domain KM388_RS21400 PF00905 Penicillin binding protein transpeptidase domain KM388_RS21405 PF07690 Major Facilitator Superfamily KM388_RS21410 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM388_RS21410 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM388_RS21430 PF04551 GcpE protein KM388_RS21435 PF01475 Ferric uptake regulator family KM388_RS21440 PF00950 ABC 3 transport family KM388_RS21445 PF00005 ABC transporter KM388_RS21450 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM388_RS21450 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS21455 PF11116 Protein of unknown function (DUF2624) KM388_RS21460 PF01261 Xylose isomerase-like TIM barrel KM388_RS21465 PF00270 DEAD/DEAH box helicase KM388_RS21465 PF00271 Helicase conserved C-terminal domain KM388_RS21475 PF02401 LytB protein KM388_RS21480 PF01784 NIF3 (NGG1p interacting factor 3) KM388_RS21485 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM388_RS21490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM388_RS21495 PF03979 Sigma-70 factor, region 1.1 KM388_RS21495 PF00140 Sigma-70 factor, region 1.2 KM388_RS21495 PF04542 Sigma-70 region 2 KM388_RS21495 PF04539 Sigma-70 region 3 KM388_RS21495 PF04545 Sigma-70, region 4 KM388_RS21500 PF01807 CHC2 zinc finger KM388_RS21500 PF08275 DNA primase catalytic core, N-terminal domain KM388_RS21500 PF10410 DnaB-helicase binding domain of primase KM388_RS21505 PF03618 Kinase/pyrophosphorylase KM388_RS21510 PF00571 CBS domain KM388_RS21510 PF08279 HTH domain KM388_RS21515 PF02565 Recombination protein O C terminal KM388_RS21515 PF11967 Recombination protein O N terminal KM388_RS21525 PF07650 KH domain KM388_RS21525 PF01926 50S ribosome-binding GTPase KM388_RS21530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM388_RS21535 PF01219 Prokaryotic diacylglycerol kinase KM388_RS21540 PF02130 Uncharacterized protein family UPF0054 KM388_RS21545 PF07698 7TM receptor with intracellular HD hydrolase KM388_RS21545 PF07697 7TM-HD extracellular KM388_RS21545 PF01966 HD domain KM388_RS21550 PF02562 PhoH-like protein KM388_RS21555 PF06898 Putative stage IV sporulation protein YqfD KM388_RS21560 PF07873 YabP family KM388_RS21565 PF09424 Yqey-like protein KM388_RS21570 PF01165 Ribosomal protein S21 KM388_RS21575 PF04055 Radical SAM superfamily KM388_RS21575 PF01938 TRAM domain KM388_RS21575 PF00919 Uncharacterized protein family UPF0004 KM388_RS21580 PF04452 RNA methyltransferase KM388_RS21590 PF00684 DnaJ central domain KM388_RS21590 PF00226 DnaJ domain KM388_RS21590 PF01556 DnaJ C terminal domain KM388_RS21595 PF00012 Hsp70 protein KM388_RS21600 PF01025 GrpE KM388_RS21605 PF01628 HrcA protein C terminal domain KM388_RS21610 PF04055 Radical SAM superfamily KM388_RS21610 PF06969 HemN C-terminal domain KM388_RS21615 PF01638 HxlR-like helix-turn-helix KM388_RS21620 PF03144 Elongation factor Tu domain 2 KM388_RS21620 PF00679 Elongation factor G C-terminus KM388_RS21620 PF00009 Elongation factor Tu GTP binding domain KM388_RS21620 PF06421 GTP-binding protein LepA C-terminus KM388_RS21630 PF03418 Germination protease KM388_RS21635 PF01649 Ribosomal protein S20 KM388_RS21640 PF06144 DNA polymerase III, delta subunit KM388_RS21645 PF14141 YqzM-like protein KM388_RS21655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM388_RS21660 PF10531 SLBB domain KM388_RS21665 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM388_RS21665 PF03807 NADP oxidoreductase coenzyme F420-dependent KM388_RS21670 PF13649 Methyltransferase domain KM388_RS21680 PF01966 HD domain KM388_RS21685 PF01467 Cytidylyltransferase-like KM388_RS21690 PF01985 CRS1 / YhbY (CRM) domain KM388_RS21695 PF08501 Shikimate dehydrogenase substrate binding domain KM388_RS21695 PF01488 Shikimate / quinate 5-dehydrogenase KM388_RS21695 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM388_RS21700 PF01926 50S ribosome-binding GTPase KM388_RS21715 PF02666 Phosphatidylserine decarboxylase KM388_RS21720 PF04545 Sigma-70, region 4 KM388_RS21720 PF04542 Sigma-70 region 2 KM388_RS21730 PF16244 Domain of unknown function (DUF4901) KM388_RS21735 PF00471 Ribosomal protein L33 KM388_RS21740 PF00881 Nitroreductase family KM388_RS21745 PF04607 Region found in RelA / SpoT proteins KM388_RS21755 PF00245 Alkaline phosphatase KM388_RS21765 PF00561 alpha/beta hydrolase fold KM388_RS21765 PF08386 TAP-like protein KM388_RS21800 PF02225 PA domain KM388_RS21800 PF05922 Peptidase inhibitor I9 KM388_RS21800 PF00082 Subtilase family KM388_RS21800 PF13860 FlgD Ig-like domain KM388_RS21805 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM388_RS21815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS21820 PF07681 DoxX KM388_RS21850 PF00005 ABC transporter KM388_RS21855 PF01032 FecCD transport family KM388_RS21860 PF01497 Periplasmic binding protein KM388_RS21865 PF14143 YrhC-like protein KM388_RS21870 PF00171 Aldehyde dehydrogenase family KM388_RS21870 PF00465 Iron-containing alcohol dehydrogenase KM388_RS21875 PF01053 Cys/Met metabolism PLP-dependent enzyme KM388_RS21880 PF00291 Pyridoxal-phosphate dependent enzyme KM388_RS21885 PF01048 Phosphorylase superfamily KM388_RS21890 PF08241 Methyltransferase domain KM388_RS21905 PF03717 Penicillin-binding Protein dimerisation domain KM388_RS21905 PF00905 Penicillin binding protein transpeptidase domain KM388_RS21910 PF03449 Transcription elongation factor, N-terminal KM388_RS21910 PF01272 Transcription elongation factor, GreA/GreB, C-term KM388_RS21915 PF00485 Phosphoribulokinase / Uridine kinase family KM388_RS21920 PF16325 Peptidase family U32 C-terminal domain KM388_RS21920 PF01136 Peptidase family U32 KM388_RS21925 PF01136 Peptidase family U32 KM388_RS21930 PF01596 O-methyltransferase KM388_RS21935 PF02618 YceG-like family KM388_RS21940 PF06949 Protein of unknown function (DUF1292) KM388_RS21945 PF03652 Holliday junction resolvase KM388_RS21950 PF06135 IreB regulatory phosphoprotein KM388_RS21955 PF02272 DHHA1 domain KM388_RS21955 PF01411 tRNA synthetases class II (A) KM388_RS21955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM388_RS21965 PF01594 AI-2E family transporter KM388_RS21985 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM388_RS21985 PF13538 UvrD-like helicase C-terminal domain KM388_RS21985 PF14490 Helix-hairpin-helix containing domain KM388_RS22000 PF00266 Aminotransferase class-V KM388_RS22005 PF02082 Transcriptional regulator KM388_RS22010 PF16193 AAA C-terminal domain KM388_RS22010 PF12002 MgsA AAA+ ATPase C terminal KM388_RS22010 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM388_RS22020 PF00899 ThiF family KM388_RS22025 PF01336 OB-fold nucleic acid binding domain KM388_RS22025 PF02938 GAD domain KM388_RS22025 PF00152 tRNA synthetases class II (D, K and N) KM388_RS22030 PF03129 Anticodon binding domain KM388_RS22030 PF13393 Histidyl-tRNA synthetase KM388_RS22040 PF02580 D-Tyr-tRNA(Tyr) deacylase KM388_RS22045 PF02824 TGS domain KM388_RS22045 PF04607 Region found in RelA / SpoT proteins KM388_RS22045 PF13291 ACT domain KM388_RS22050 PF00156 Phosphoribosyl transferase domain KM388_RS22055 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM388_RS22055 PF17768 RecJ OB domain KM388_RS22055 PF01368 DHH family KM388_RS22055 PF02272 DHHA1 domain KM388_RS22060 PF01545 Cation efflux family KM388_RS22060 PF16916 Dimerisation domain of Zinc Transporter KM388_RS22065 PF07549 SecD/SecF GG Motif KM388_RS22065 PF02355 Protein export membrane protein KM388_RS22070 PF13797 Post-transcriptional regulator KM388_RS22075 PF01943 Polysaccharide biosynthesis protein KM388_RS22075 PF14667 Polysaccharide biosynthesis C-terminal domain KM388_RS22080 PF04239 Protein of unknown function (DUF421) KM388_RS22090 PF02699 Preprotein translocase subunit KM388_RS22095 PF01702 Queuine tRNA-ribosyltransferase KM388_RS22100 PF02547 Queuosine biosynthesis protein KM388_RS22105 PF11146 Protein of unknown function (DUF2905) KM388_RS22110 PF17864 RuvB AAA lid domain KM388_RS22110 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM388_RS22110 PF05491 RuvB C-terminal winged helix domain KM388_RS22115 PF07499 RuvA, C-terminal domain KM388_RS22115 PF01330 RuvA N terminal domain KM388_RS22120 PF01497 Periplasmic binding protein KM388_RS22130 PF00892 EamA-like transporter family KM388_RS22135 PF00892 EamA-like transporter family KM388_RS22140 PF01022 Bacterial regulatory protein, arsR family KM388_RS22155 PF01476 LysM domain KM388_RS22160 PF02445 Quinolinate synthetase A protein KM388_RS22165 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM388_RS22165 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM388_RS22170 PF00890 FAD binding domain KM388_RS22170 PF02910 Fumarate reductase flavoprotein C-term KM388_RS22175 PF00266 Aminotransferase class-V KM388_RS22180 PF08279 HTH domain KM388_RS22180 PF02829 3H domain KM388_RS22185 PF03473 MOSC domain KM388_RS22185 PF03475 3-alpha domain KM388_RS22190 PF01842 ACT domain KM388_RS22190 PF00800 Prephenate dehydratase KM388_RS22195 PF02687 FtsX-like permease family KM388_RS22200 PF02687 FtsX-like permease family KM388_RS22205 PF00005 ABC transporter KM388_RS22220 PF09269 Domain of unknown function (DUF1967) KM388_RS22220 PF01018 GTP1/OBG KM388_RS22220 PF01926 50S ribosome-binding GTPase KM388_RS22225 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM388_RS22225 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM388_RS22230 PF01016 Ribosomal L27 protein KM388_RS22235 PF04327 Cysteine protease Prp KM388_RS22240 PF00829 Ribosomal prokaryotic L21 protein KM388_RS22245 PF10150 Ribonuclease E/G family KM388_RS22245 PF00575 S1 RNA binding domain KM388_RS22250 PF02163 Peptidase family M50 KM388_RS22255 PF01551 Peptidase family M23 KM388_RS22260 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM388_RS22265 PF03775 Septum formation inhibitor MinC, C-terminal domain KM388_RS22275 PF04085 rod shape-determining protein MreC KM388_RS22285 PF04002 RadC-like JAB domain KM388_RS22290 PF02545 Maf-like protein KM388_RS22300 PF02875 Mur ligase family, glutamate ligase domain KM388_RS22300 PF08245 Mur ligase middle domain KM388_RS22305 PF00133 tRNA synthetases class I (I, L, M and V) KM388_RS22305 PF08264 Anticodon-binding domain of tRNA KM388_RS22305 PF10458 Valyl tRNA synthetase tRNA binding arm KM388_RS22315 PF01476 LysM domain KM388_RS22320 PF00202 Aminotransferase class-III KM388_RS22325 PF00490 Delta-aminolevulinic acid dehydratase KM388_RS22330 PF02602 Uroporphyrinogen-III synthase HemD KM388_RS22335 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM388_RS22335 PF03900 Porphobilinogen deaminase, C-terminal domain KM388_RS22340 PF01578 Cytochrome C assembly protein KM388_RS22345 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM388_RS22345 PF01488 Shikimate / quinate 5-dehydrogenase KM388_RS22345 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM388_RS22350 PF01047 MarR family KM388_RS22355 PF02566 OsmC-like protein KM388_RS22360 PF01926 50S ribosome-binding GTPase KM388_RS22365 PF05362 Lon protease (S16) C-terminal proteolytic domain KM388_RS22365 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM388_RS22365 PF00004 ATPase family associated with various cellular activities (AAA) KM388_RS22370 PF00004 ATPase family associated with various cellular activities (AAA) KM388_RS22370 PF05362 Lon protease (S16) C-terminal proteolytic domain KM388_RS22375 PF07724 AAA domain (Cdc48 subfamily) KM388_RS22375 PF10431 C-terminal, D2-small domain, of ClpB protein KM388_RS22375 PF06689 ClpX C4-type zinc finger KM388_RS22380 PF05697 Bacterial trigger factor protein (TF) KM388_RS22380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM388_RS22380 PF05698 Bacterial trigger factor protein (TF) C-terminus KM388_RS22395 PF08000 Bacterial PH domain KM388_RS22395 PF11724 YvbH-like oligomerisation region KM388_RS22415 PF12850 Calcineurin-like phosphoesterase superfamily domain KM388_RS22420 PF01725 Ham1 family KM388_RS22425 PF03725 3' exoribonuclease family, domain 2 KM388_RS22425 PF01138 3' exoribonuclease family, domain 1 KM388_RS22430 PF10646 Sporulation and spore germination KM388_RS22435 PF01177 Asp/Glu/Hydantoin racemase KM388_RS22440 PF07690 Major Facilitator Superfamily KM388_RS22450 PF00440 Bacterial regulatory proteins, tetR family KM388_RS22465 PF00196 Bacterial regulatory proteins, luxR family KM388_RS22470 PF00860 Permease family KM388_RS22480 PF07969 Amidohydrolase family KM388_RS22485 PF07969 Amidohydrolase family KM388_RS22490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS22495 PF12911 N-terminal TM domain of oligopeptide transport permease C KM388_RS22495 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS22500 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS22505 PF00005 ABC transporter KM388_RS22505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS22510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM388_RS22510 PF00005 ABC transporter KM388_RS22515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS22515 PF06580 Histidine kinase KM388_RS22515 PF07694 5TMR of 5TMR-LYT KM388_RS22520 PF04397 LytTr DNA-binding domain KM388_RS22520 PF00072 Response regulator receiver domain KM388_RS22535 PF04024 PspC domain KM388_RS22540 PF01381 Helix-turn-helix KM388_RS22540 PF07883 Cupin domain KM388_RS22545 PF13536 Putative multidrug resistance efflux transporter KM388_RS22550 PF00230 Major intrinsic protein KM388_RS22555 PF02082 Transcriptional regulator KM388_RS22570 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM388_RS22580 PF01618 MotA/TolQ/ExbB proton channel family KM388_RS22585 PF02557 D-alanyl-D-alanine carboxypeptidase KM388_RS22590 PF03061 Thioesterase superfamily KM388_RS22595 PF13085 2Fe-2S iron-sulfur cluster binding domain KM388_RS22595 PF13183 4Fe-4S dicluster domain KM388_RS22600 PF00890 FAD binding domain KM388_RS22600 PF02910 Fumarate reductase flavoprotein C-term KM388_RS22605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM388_RS22610 PF10702 Protein of unknown function (DUF2507) KM388_RS22615 PF02151 UvrB/uvrC motif KM388_RS22615 PF01541 GIY-YIG catalytic domain KM388_RS22615 PF08459 UvrC Helix-hairpin-helix N-terminal KM388_RS22620 PF00085 Thioredoxin KM388_RS22625 PF01012 Electron transfer flavoprotein domain KM388_RS22625 PF00766 Electron transfer flavoprotein FAD-binding domain KM388_RS22630 PF01012 Electron transfer flavoprotein domain KM388_RS22635 PF00378 Enoyl-CoA hydratase/isomerase KM388_RS22640 PF00440 Bacterial regulatory proteins, tetR family KM388_RS22640 PF08359 YsiA-like protein, C-terminal region KM388_RS22645 PF00501 AMP-binding enzyme KM388_RS22645 PF13193 AMP-binding enzyme C-terminal domain KM388_RS22655 PF01497 Periplasmic binding protein KM388_RS22660 PF01032 FecCD transport family KM388_RS22665 PF05163 DinB family KM388_RS22695 PF00005 ABC transporter KM388_RS22700 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS22700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS22705 PF00072 Response regulator receiver domain KM388_RS22705 PF00486 Transcriptional regulatory protein, C terminal KM388_RS22715 PF09962 Uncharacterized conserved protein (DUF2196) KM388_RS22720 PF10672 S-adenosylmethionine-dependent methyltransferase KM388_RS22720 PF17785 PUA-like domain KM388_RS22730 PF03992 Antibiotic biosynthesis monooxygenase KM388_RS22735 PF04203 Sortase domain KM388_RS22740 PF00005 ABC transporter KM388_RS22745 PF01032 FecCD transport family KM388_RS22750 PF01497 Periplasmic binding protein KM388_RS22755 PF05031 Iron Transport-associated domain KM388_RS22765 PF05031 Iron Transport-associated domain KM388_RS22770 PF05525 Branched-chain amino acid transport protein KM388_RS22775 PF00849 RNA pseudouridylate synthase KM388_RS22775 PF01479 S4 domain KM388_RS22780 PF01713 Smr domain KM388_RS22780 PF00488 MutS domain V KM388_RS22785 PF14791 DNA polymerase beta thumb KM388_RS22785 PF14716 Helix-hairpin-helix domain KM388_RS22785 PF02811 PHP domain KM388_RS22790 PF02674 Colicin V production protein KM388_RS22795 PF05164 Cell division protein ZapA KM388_RS22800 PF11858 Domain of unknown function (DUF3378) KM388_RS22800 PF01351 Ribonuclease HII KM388_RS22820 PF00152 tRNA synthetases class II (D, K and N) KM388_RS22820 PF01336 OB-fold nucleic acid binding domain KM388_RS22825 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM388_RS22825 PF01588 Putative tRNA binding domain KM388_RS22825 PF03483 B3/4 domain KM388_RS22825 PF03484 tRNA synthetase B5 domain KM388_RS22825 PF03147 Ferredoxin-fold anticodon binding domain KM388_RS22830 PF01409 tRNA synthetases class II core domain (F) KM388_RS22830 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM388_RS22835 PF00588 SpoU rRNA Methylase family KM388_RS22835 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM388_RS22840 PF14098 Small, acid-soluble spore protein I KM388_RS22845 PF01966 HD domain KM388_RS22870 PF07690 Major Facilitator Superfamily KM388_RS22880 PF00440 Bacterial regulatory proteins, tetR family KM388_RS22880 PF16859 Tetracyclin repressor-like, C-terminal domain KM388_RS22885 PF05343 M42 glutamyl aminopeptidase KM388_RS22895 PF00453 Ribosomal protein L20 KM388_RS22900 PF01632 Ribosomal protein L35 KM388_RS22905 PF00707 Translation initiation factor IF-3, C-terminal domain KM388_RS22905 PF05198 Translation initiation factor IF-3, N-terminal domain KM388_RS22910 PF03129 Anticodon binding domain KM388_RS22910 PF02824 TGS domain KM388_RS22910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM388_RS22910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM388_RS22915 PF08812 YtxC-like family KM388_RS22920 PF01695 IstB-like ATP binding protein KM388_RS22920 PF07319 Primosomal protein DnaI N-terminus KM388_RS22925 PF07261 Replication initiation and membrane attachment KM388_RS22930 PF03477 ATP cone domain KM388_RS22935 PF02675 S-adenosylmethionine decarboxylase KM388_RS22940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM388_RS22940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM388_RS22945 PF01121 Dephospho-CoA kinase KM388_RS22950 PF02659 Putative manganese efflux pump KM388_RS22955 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM388_RS22955 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM388_RS22955 PF06827 Zinc finger found in FPG and IleRS KM388_RS22960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM388_RS22960 PF01367 5'-3' exonuclease, C-terminal SAM fold KM388_RS22960 PF00476 DNA polymerase family A KM388_RS22965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS22965 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS22965 PF00989 PAS fold KM388_RS22965 PF16736 Single Cache-like KM388_RS22970 PF00486 Transcriptional regulatory protein, C terminal KM388_RS22970 PF00072 Response regulator receiver domain KM388_RS22985 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM388_RS22985 PF00056 lactate/malate dehydrogenase, NAD binding domain KM388_RS22990 PF00180 Isocitrate/isopropylmalate dehydrogenase KM388_RS22995 PF00285 Citrate synthase, C-terminal domain KM388_RS23000 PF04284 Protein of unknown function (DUF441) KM388_RS23005 PF01594 AI-2E family transporter KM388_RS23010 PF04186 FxsA cytoplasmic membrane protein KM388_RS23015 PF02887 Pyruvate kinase, alpha/beta domain KM388_RS23015 PF00391 PEP-utilising enzyme, mobile domain KM388_RS23015 PF00224 Pyruvate kinase, barrel domain KM388_RS23020 PF00365 Phosphofructokinase KM388_RS23025 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM388_RS23030 PF01039 Carboxyl transferase domain KM388_RS23030 PF17848 Acetyl-coA carboxylase zinc finger domain KM388_RS23035 PF00392 Bacterial regulatory proteins, gntR family KM388_RS23040 PF03949 Malic enzyme, NAD binding domain KM388_RS23040 PF00390 Malic enzyme, N-terminal domain KM388_RS23045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM388_RS23045 PF14579 Helix-hairpin-helix motif KM388_RS23045 PF02811 PHP domain KM388_RS23045 PF01336 OB-fold nucleic acid binding domain KM388_RS23045 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM388_RS23050 PF14034 Sporulation protein YtrH KM388_RS23060 PF01368 DHH family KM388_RS23060 PF02272 DHHA1 domain KM388_RS23065 PF14007 YtpI-like protein KM388_RS23080 PF00392 Bacterial regulatory proteins, gntR family KM388_RS23080 PF07085 DRTGG domain KM388_RS23080 PF00571 CBS domain KM388_RS23080 PF03061 Thioesterase superfamily KM388_RS23095 PF00557 Metallopeptidase family M24 KM388_RS23095 PF01321 Creatinase/Prolidase N-terminal domain KM388_RS23100 PF11518 Protein of unknown function (DUF3221) KM388_RS23135 PF12746 GNAT acetyltransferase KM388_RS23140 PF07883 Cupin domain KM388_RS23150 PF01381 Helix-turn-helix KM388_RS23160 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM388_RS23160 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM388_RS23170 PF00582 Universal stress protein family KM388_RS23190 PF14698 Argininosuccinate lyase C-terminal KM388_RS23190 PF00206 Lyase KM388_RS23195 PF00764 Arginosuccinate synthase KM388_RS23210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS23210 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM388_RS23215 PF12787 EcsC protein family KM388_RS23230 PF00871 Acetokinase family KM388_RS23235 PF02384 N-6 DNA Methylase KM388_RS23240 PF08534 Redoxin KM388_RS23245 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM388_RS23255 PF01513 ATP-NAD kinase KM388_RS23260 PF07969 Amidohydrolase family KM388_RS23270 PF00501 AMP-binding enzyme KM388_RS23270 PF13193 AMP-binding enzyme C-terminal domain KM388_RS23275 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM388_RS23280 PF02568 Thiamine biosynthesis protein (ThiI) KM388_RS23280 PF02926 THUMP domain KM388_RS23285 PF00266 Aminotransferase class-V KM388_RS23290 PF06160 Septation ring formation regulator, EzrA KM388_RS23295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS23295 PF03466 LysR substrate binding domain KM388_RS23300 PF00892 EamA-like transporter family KM388_RS23310 PF13185 GAF domain KM388_RS23315 PF01053 Cys/Met metabolism PLP-dependent enzyme KM388_RS23320 PF00163 Ribosomal protein S4/S9 N-terminal domain KM388_RS23320 PF01479 S4 domain KM388_RS23335 PF00579 tRNA synthetases class I (W and Y) KM388_RS23335 PF01479 S4 domain KM388_RS23345 PF04542 Sigma-70 region 2 KM388_RS23345 PF08281 Sigma-70, region 4 KM388_RS23355 PF00501 AMP-binding enzyme KM388_RS23355 PF13193 AMP-binding enzyme C-terminal domain KM388_RS23360 PF00583 Acetyltransferase (GNAT) family KM388_RS23365 PF00571 CBS domain KM388_RS23370 PF00850 Histone deacetylase domain KM388_RS23380 PF00072 Response regulator receiver domain KM388_RS23380 PF00486 Transcriptional regulatory protein, C terminal KM388_RS23385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS23385 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS23385 PF13426 PAS domain KM388_RS23385 PF00672 HAMP domain KM388_RS23390 PF12796 Ankyrin repeats (3 copies) KM388_RS23395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM388_RS23400 PF01741 Large-conductance mechanosensitive channel, MscL KM388_RS23425 PF00356 Bacterial regulatory proteins, lacI family KM388_RS23430 PF07537 CamS sex pheromone cAM373 precursor KM388_RS23435 PF11009 Protein of unknown function (DUF2847) KM388_RS23445 PF02073 Thermophilic metalloprotease (M29) KM388_RS23465 PF13302 Acetyltransferase (GNAT) domain KM388_RS23470 PF02875 Mur ligase family, glutamate ligase domain KM388_RS23470 PF08245 Mur ligase middle domain KM388_RS23470 PF01225 Mur ligase family, catalytic domain KM388_RS23480 PF17854 FtsK alpha domain KM388_RS23480 PF09397 Ftsk gamma domain KM388_RS23480 PF01580 FtsK/SpoIIIE family KM388_RS23490 PF14794 Domain of unknown function (DUF4479) KM388_RS23490 PF01588 Putative tRNA binding domain KM388_RS23495 PF07285 Protein of unknown function (DUF1444) KM388_RS23500 PF00085 Thioredoxin KM388_RS23505 PF01931 Protein of unknown function DUF84 KM388_RS23510 PF05343 M42 glutamyl aminopeptidase KM388_RS23520 PF00753 Metallo-beta-lactamase superfamily KM388_RS23525 PF02390 Putative methyltransferase KM388_RS23530 PF14165 YtzH-like protein KM388_RS23535 PF01636 Phosphotransferase enzyme family KM388_RS23540 PF00128 Alpha amylase, catalytic domain KM388_RS23540 PF17999 Pullulanase N1-terminal domain KM388_RS23540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM388_RS23545 PF02834 LigT like Phosphoesterase KM388_RS23550 PF01546 Peptidase family M20/M25/M40 KM388_RS23555 PF08220 DeoR-like helix-turn-helix domain KM388_RS23560 PF00849 RNA pseudouridylate synthase KM388_RS23560 PF01479 S4 domain KM388_RS23565 PF14667 Polysaccharide biosynthesis C-terminal domain KM388_RS23565 PF01943 Polysaccharide biosynthesis protein KM388_RS23575 PF07690 Major Facilitator Superfamily KM388_RS23580 PF01022 Bacterial regulatory protein, arsR family KM388_RS23585 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM388_RS23595 PF10957 Sporulation protein Cse60 KM388_RS23615 PF06800 Sugar transport protein KM388_RS23630 PF02391 MoaE protein KM388_RS23635 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM388_RS23640 PF00994 Probable molybdopterin binding domain KM388_RS23640 PF03454 MoeA C-terminal region (domain IV) KM388_RS23640 PF03453 MoeA N-terminal region (domain I and II) KM388_RS23645 PF01967 MoaC family KM388_RS23650 PF00899 ThiF family KM388_RS23655 PF06463 Molybdenum Cofactor Synthesis C KM388_RS23655 PF04055 Radical SAM superfamily KM388_RS23680 PF00581 Rhodanese-like domain KM388_RS23690 PF00561 alpha/beta hydrolase fold KM388_RS23695 PF03323 Bacillus/Clostridium GerA spore germination protein KM388_RS23700 PF03845 Spore germination protein KM388_RS23725 PF08264 Anticodon-binding domain of tRNA KM388_RS23725 PF00133 tRNA synthetases class I (I, L, M and V) KM388_RS23725 PF13603 Leucyl-tRNA synthetase, Domain 2 KM388_RS23725 PF09334 tRNA synthetases class I (M) KM388_RS23730 PF07690 Major Facilitator Superfamily KM388_RS23735 PF00999 Sodium/hydrogen exchanger family KM388_RS23740 PF02080 TrkA-C domain KM388_RS23745 PF00589 Phage integrase family KM388_RS23755 PF00005 ABC transporter KM388_RS23760 PF07786 Protein of unknown function (DUF1624) KM388_RS23760 PF04235 Protein of unknown function (DUF418) KM388_RS23770 PF10732 Protein of unknown function (DUF2524) KM388_RS23775 PF04055 Radical SAM superfamily KM388_RS23775 PF16199 Radical_SAM C-terminal domain KM388_RS23780 PF06962 Putative rRNA methylase KM388_RS23785 PF13732 Domain of unknown function (DUF4162) KM388_RS23785 PF00005 ABC transporter KM388_RS23795 PF01177 Asp/Glu/Hydantoin racemase KM388_RS23810 PF10776 Protein of unknown function (DUF2600) KM388_RS23815 PF12146 Serine aminopeptidase, S33 KM388_RS23820 PF00132 Bacterial transferase hexapeptide (six repeats) KM388_RS23825 PF01569 PAP2 superfamily KM388_RS23830 PF13439 Glycosyltransferase Family 4 KM388_RS23830 PF00534 Glycosyl transferases group 1 KM388_RS23835 PF12804 MobA-like NTP transferase domain KM388_RS23840 PF00994 Probable molybdopterin binding domain KM388_RS23855 PF02772 S-adenosylmethionine synthetase, central domain KM388_RS23855 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM388_RS23855 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM388_RS23860 PF01293 Phosphoenolpyruvate carboxykinase KM388_RS23895 PF01784 NIF3 (NGG1p interacting factor 3) KM388_RS23900 PF00989 PAS fold KM388_RS23900 PF13188 PAS domain KM388_RS23900 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS23900 PF13426 PAS domain KM388_RS23900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS23905 PF08447 PAS fold KM388_RS23905 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS23905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS23905 PF00989 PAS fold KM388_RS23910 PF00561 alpha/beta hydrolase fold KM388_RS23910 PF08386 TAP-like protein KM388_RS23935 PF00005 ABC transporter KM388_RS23940 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS23965 PF00293 NUDIX domain KM388_RS23990 PF02664 S-Ribosylhomocysteinase (LuxS) KM388_RS23995 PF01809 Putative membrane protein insertion efficiency factor KM388_RS24000 PF00484 Carbonic anhydrase KM388_RS24005 PF01654 Cytochrome bd terminal oxidase subunit I KM388_RS24010 PF02322 Cytochrome bd terminal oxidase subunit II KM388_RS24015 PF10676 Spore germination protein gerPA/gerPF KM388_RS24030 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS24030 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM388_RS24055 PF04012 PspA/IM30 family KM388_RS24070 PF07664 Ferrous iron transport protein B C terminus KM388_RS24070 PF17910 FeoB cytosolic helical domain KM388_RS24070 PF02421 Ferrous iron transport protein B KM388_RS24070 PF07670 Nucleoside recognition KM388_RS24080 PF09515 Thiamine transporter protein (Thia_YuaJ) KM388_RS24085 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS24085 PF00672 HAMP domain KM388_RS24085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS24090 PF00072 Response regulator receiver domain KM388_RS24090 PF00486 Transcriptional regulatory protein, C terminal KM388_RS24115 PF00156 Phosphoribosyl transferase domain KM388_RS24120 PF00781 Diacylglycerol kinase catalytic domain KM388_RS24140 PF00248 Aldo/keto reductase family KM388_RS24155 PF09335 SNARE associated Golgi protein KM388_RS24160 PF00398 Ribosomal RNA adenine dimethylase KM388_RS24165 PF02687 FtsX-like permease family KM388_RS24170 PF00005 ABC transporter KM388_RS24180 PF00486 Transcriptional regulatory protein, C terminal KM388_RS24180 PF00072 Response regulator receiver domain KM388_RS24185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS24190 PF02687 FtsX-like permease family KM388_RS24195 PF02687 FtsX-like permease family KM388_RS24200 PF00005 ABC transporter KM388_RS24215 PF02447 GntP family permease KM388_RS24220 PF07702 UTRA domain KM388_RS24220 PF00392 Bacterial regulatory proteins, gntR family KM388_RS24230 PF07071 KDGP aldolase KM388_RS24235 PF03841 L-seryl-tRNA selenium transferase KM388_RS24240 PF01979 Amidohydrolase family KM388_RS24260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS24260 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS24265 PF00072 Response regulator receiver domain KM388_RS24265 PF00486 Transcriptional regulatory protein, C terminal KM388_RS24270 PF13378 Enolase C-terminal domain-like KM388_RS24270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM388_RS24275 PF00501 AMP-binding enzyme KM388_RS24275 PF13193 AMP-binding enzyme C-terminal domain KM388_RS24280 PF00378 Enoyl-CoA hydratase/isomerase KM388_RS24285 PF00561 alpha/beta hydrolase fold KM388_RS24290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM388_RS24290 PF16582 Middle domain of thiamine pyrophosphate KM388_RS24290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM388_RS24295 PF00425 chorismate binding enzyme KM388_RS24300 PF01040 UbiA prenyltransferase family KM388_RS24305 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM388_RS24310 PF00313 'Cold-shock' DNA-binding domain KM388_RS24325 PF00343 Carbohydrate phosphorylase KM388_RS24330 PF08323 Starch synthase catalytic domain KM388_RS24330 PF00534 Glycosyl transferases group 1 KM388_RS24335 PF00483 Nucleotidyl transferase KM388_RS24340 PF00483 Nucleotidyl transferase KM388_RS24345 PF00128 Alpha amylase, catalytic domain KM388_RS24345 PF02806 Alpha amylase, C-terminal all-beta domain KM388_RS24345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM388_RS24355 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM388_RS24355 PF00056 lactate/malate dehydrogenase, NAD binding domain KM388_RS24450 PF05698 Bacterial trigger factor protein (TF) C-terminus KM388_RS24450 PF05697 Bacterial trigger factor protein (TF) KM388_RS24485 PF02308 MgtC family KM388_RS24490 PF02254 TrkA-N domain KM388_RS24490 PF07885 Ion channel KM388_RS24495 PF08868 YugN-like family KM388_RS24500 PF00342 Phosphoglucose isomerase KM388_RS24505 PF04070 Domain of unknown function (DUF378) KM388_RS24510 PF00575 S1 RNA binding domain KM388_RS24515 PF00155 Aminotransferase class I and II KM388_RS24520 PF01037 Lrp/AsnC ligand binding domain KM388_RS24525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM388_RS24525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM388_RS24530 PF00561 alpha/beta hydrolase fold KM388_RS24530 PF08386 TAP-like protein KM388_RS24540 PF00155 Aminotransferase class I and II KM388_RS24555 PF08810 Kinase associated protein B KM388_RS24560 PF00929 Exonuclease KM388_RS24565 PF03600 Citrate transporter KM388_RS24580 PF03129 Anticodon binding domain KM388_RS24580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM388_RS24585 PF03061 Thioesterase superfamily KM388_RS24595 PF02632 BioY family KM388_RS24605 PF00483 Nucleotidyl transferase KM388_RS24610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM388_RS24610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM388_RS24610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM388_RS24610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM388_RS24615 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM388_RS24615 PF10372 Bacterial membrane-spanning protein N-terminus KM388_RS24620 PF02789 Cytosol aminopeptidase family, N-terminal domain KM388_RS24620 PF00883 Cytosol aminopeptidase family, catalytic domain KM388_RS24625 PF06725 3D domain KM388_RS24635 PF00293 NUDIX domain KM388_RS24635 PF13344 Haloacid dehalogenase-like hydrolase KM388_RS24640 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS24645 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS24655 PF06445 GyrI-like small molecule binding domain KM388_RS24670 PF04463 Protein of unknown function (DUF523) KM388_RS24690 PF01521 Iron-sulphur cluster biosynthesis KM388_RS24695 PF01678 Diaminopimelate epimerase KM388_RS24700 PF07293 Protein of unknown function (DUF1450) KM388_RS24705 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS24715 PF00664 ABC transporter transmembrane region KM388_RS24715 PF00005 ABC transporter KM388_RS24715 PF03412 Peptidase C39 family KM388_RS24720 PF03649 Uncharacterised protein family (UPF0014) KM388_RS24725 PF08274 PhnA Zinc-Ribbon KM388_RS24725 PF03831 PhnA domain KM388_RS24760 PF01909 Nucleotidyltransferase domain KM388_RS24760 PF13427 Domain of unknown function (DUF4111) KM388_RS24765 PF07315 Protein of unknown function (DUF1462) KM388_RS24770 PF01106 NifU-like domain KM388_RS24785 PF04608 Phosphatidylglycerophosphatase A KM388_RS24795 PF02525 Flavodoxin-like fold KM388_RS24800 PF13344 Haloacid dehalogenase-like hydrolase KM388_RS24810 PF01934 Protein of unknown function DUF86 KM388_RS24815 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM388_RS24830 PF06265 Protein of unknown function (DUF1027) KM388_RS24835 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM388_RS24840 PF07739 TipAS antibiotic-recognition domain KM388_RS24840 PF13411 MerR HTH family regulatory protein KM388_RS24845 PF10086 YhfC intramembrane metalloprotease KM388_RS24865 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM388_RS24865 PF04055 Radical SAM superfamily KM388_RS24870 PF01551 Peptidase family M23 KM388_RS24880 PF08827 Domain of unknown function (DUF1805) KM388_RS24885 PF02872 5'-nucleotidase, C-terminal domain KM388_RS24890 PF03551 Transcriptional regulator PadR-like family KM388_RS24895 PF04892 VanZ like family KM388_RS24900 PF01458 Uncharacterized protein family (UPF0051) KM388_RS24905 PF01592 NifU-like N terminal domain KM388_RS24910 PF00266 Aminotransferase class-V KM388_RS24915 PF01458 Uncharacterized protein family (UPF0051) KM388_RS24920 PF00005 ABC transporter KM388_RS24925 PF03180 NLPA lipoprotein KM388_RS24930 PF03180 NLPA lipoprotein KM388_RS24935 PF00528 Binding-protein-dependent transport system inner membrane component KM388_RS24940 PF09383 NIL domain KM388_RS24940 PF00005 ABC transporter KM388_RS24950 PF00085 Thioredoxin KM388_RS24955 PF01751 Toprim domain KM388_RS24960 PF01597 Glycine cleavage H-protein KM388_RS24965 PF03960 ArsC family KM388_RS25010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM388_RS25010 PF00056 lactate/malate dehydrogenase, NAD binding domain KM388_RS25035 PF00440 Bacterial regulatory proteins, tetR family KM388_RS25035 PF13305 Tetracyclin repressor-like, C-terminal domain KM388_RS25040 PF00753 Metallo-beta-lactamase superfamily KM388_RS25045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM388_RS25045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM388_RS25045 PF02770 Acyl-CoA dehydrogenase, middle domain KM388_RS25050 PF00108 Thiolase, N-terminal domain KM388_RS25050 PF02803 Thiolase, C-terminal domain KM388_RS25055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM388_RS25055 PF00378 Enoyl-CoA hydratase/isomerase KM388_RS25055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM388_RS25060 PF14115 YuzL-like protein KM388_RS25065 PF07943 Penicillin-binding protein 5, C-terminal domain KM388_RS25065 PF00768 D-alanyl-D-alanine carboxypeptidase KM388_RS25070 PF01619 Proline dehydrogenase KM388_RS25075 PF10835 Protein of unknown function (DUF2573) KM388_RS25080 PF01910 Thiamine-binding protein KM388_RS25085 PF02743 Cache domain KM388_RS25085 PF00672 HAMP domain KM388_RS25085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS25105 PF07690 Major Facilitator Superfamily KM388_RS25110 PF13520 Amino acid permease KM388_RS25120 PF02096 60Kd inner membrane protein KM388_RS25130 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM388_RS25130 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM388_RS25165 PF09335 SNARE associated Golgi protein KM388_RS25175 PF03734 L,D-transpeptidase catalytic domain KM388_RS25175 PF17969 L,D-transpeptidase C-terminal domain KM388_RS25180 PF00486 Transcriptional regulatory protein, C terminal KM388_RS25180 PF00072 Response regulator receiver domain KM388_RS25185 PF00989 PAS fold KM388_RS25185 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS25185 PF16736 Single Cache-like KM388_RS25185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS25195 PF08264 Anticodon-binding domain of tRNA KM388_RS25195 PF09334 tRNA synthetases class I (M) KM388_RS25205 PF02743 Cache domain KM388_RS25205 PF00672 HAMP domain KM388_RS25205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS25210 PF01883 Iron-sulfur cluster assembly protein KM388_RS25215 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM388_RS25215 PF01447 Thermolysin metallopeptidase, catalytic domain KM388_RS25215 PF03413 Peptidase propeptide and YPEB domain KM388_RS25215 PF07504 Fungalysin/Thermolysin Propeptide Motif KM388_RS25220 PF17954 Quercetinase C-terminal cupin domain KM388_RS25220 PF02678 Pirin KM388_RS25225 PF01047 MarR family KM388_RS25235 PF00999 Sodium/hydrogen exchanger family KM388_RS25240 PF02080 TrkA-C domain KM388_RS25245 PF01235 Sodium:alanine symporter family KM388_RS25250 PF00210 Ferritin-like domain KM388_RS25265 PF03641 Possible lysine decarboxylase KM388_RS25275 PF00210 Ferritin-like domain KM388_RS25285 PF07662 Na+ dependent nucleoside transporter C-terminus KM388_RS25285 PF01773 Na+ dependent nucleoside transporter N-terminus KM388_RS25290 PF01773 Na+ dependent nucleoside transporter N-terminus KM388_RS25290 PF07662 Na+ dependent nucleoside transporter C-terminus KM388_RS25295 PF01235 Sodium:alanine symporter family KM388_RS25300 PF01235 Sodium:alanine symporter family KM388_RS25305 PF13460 NAD(P)H-binding KM388_RS25320 PF00248 Aldo/keto reductase family KM388_RS25325 PF07690 Major Facilitator Superfamily KM388_RS25330 PF01638 HxlR-like helix-turn-helix KM388_RS25335 PF07849 Protein of unknown function (DUF1641) KM388_RS25340 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS25345 PF01479 S4 domain KM388_RS25345 PF00579 tRNA synthetases class I (W and Y) KM388_RS25350 PF01565 FAD binding domain KM388_RS25350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM388_RS25360 PF00672 HAMP domain KM388_RS25360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM388_RS25360 PF17202 Single cache domain 3 KM388_RS25370 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM388_RS25375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM388_RS25390 PF13302 Acetyltransferase (GNAT) domain KM388_RS25395 PF06146 Phosphate-starvation-inducible E KM388_RS25410 PF00005 ABC transporter KM388_RS25415 PF01032 FecCD transport family KM388_RS25420 PF01032 FecCD transport family KM388_RS25430 PF00072 Response regulator receiver domain KM388_RS25430 PF00486 Transcriptional regulatory protein, C terminal KM388_RS25440 PF01668 SmpB protein KM388_RS25445 PF00575 S1 RNA binding domain KM388_RS25445 PF17876 Cold shock domain KM388_RS25445 PF08206 Ribonuclease B OB domain KM388_RS25445 PF00773 RNB domain KM388_RS25450 PF12146 Serine aminopeptidase, S33 KM388_RS25455 PF03840 Preprotein translocase SecG subunit KM388_RS25460 PF04172 LrgB-like family KM388_RS25465 PF03788 LrgA family KM388_RS25470 PF01156 Inosine-uridine preferring nucleoside hydrolase KM388_RS25560 PF04860 Phage portal protein KM388_RS25580 PF02899 Phage integrase, N-terminal SAM-like domain KM388_RS25580 PF00589 Phage integrase family KM388_RS25585 PF03952 Enolase, N-terminal domain KM388_RS25585 PF00113 Enolase, C-terminal TIM barrel domain KM388_RS25590 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM388_RS25590 PF01676 Metalloenzyme superfamily KM388_RS25595 PF00121 Triosephosphate isomerase KM388_RS25600 PF00162 Phosphoglycerate kinase KM388_RS25605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM388_RS25605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM388_RS25610 PF04198 Putative sugar-binding domain KM388_RS25620 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM388_RS25620 PF04963 Sigma-54 factor, core binding domain KM388_RS25620 PF04552 Sigma-54, DNA binding domain KM388_RS25640 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM388_RS25645 PF07451 Stage V sporulation protein AD (SpoVAD) KM388_RS25650 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM388_RS25660 PF04239 Protein of unknown function (DUF421) KM388_RS25665 PF00574 Clp protease KM388_RS25670 PF00381 PTS HPr component phosphorylation site KM388_RS25675 PF02650 WhiA C-terminal HTH domain KM388_RS25675 PF14527 WhiA LAGLIDADG-like domain KM388_RS25675 PF10298 WhiA N-terminal LAGLIDADG-like domain KM388_RS25680 PF01933 Uncharacterised protein family UPF0052 KM388_RS25685 PF03668 P-loop ATPase protein family KM388_RS25690 PF00293 NUDIX domain KM388_RS25700 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM388_RS25710 PF14602 Hexapeptide repeat of succinyl-transferase KM388_RS25715 PF13419 Haloacid dehalogenase-like hydrolase KM388_RS25720 PF01790 Prolipoprotein diacylglyceryl transferase KM388_RS25725 PF02603 HPr Serine kinase N terminus KM388_RS25725 PF07475 HPr Serine kinase C-terminal domain KM388_RS25730 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM388_RS25740 PF17760 UvrA interaction domain KM388_RS25740 PF17755 UvrA DNA-binding domain KM388_RS25740 PF00005 ABC transporter KM388_RS25745 PF17757 UvrB interaction domain KM388_RS25745 PF12344 Ultra-violet resistance protein B KM388_RS25745 PF04851 Type III restriction enzyme, res subunit KM388_RS25745 PF00271 Helicase conserved C-terminal domain KM388_RS25745 PF02151 UvrB/uvrC motif KM388_RS25750 PF12323 Helix-turn-helix domain KM388_RS25750 PF01385 Probable transposase KM388_RS25750 PF07282 Putative transposase DNA-binding domain KM388_RS25765 PF07739 TipAS antibiotic-recognition domain KM388_RS25765 PF13411 MerR HTH family regulatory protein KM388_RS25790 PF03601 Conserved hypothetical protein 698 KM388_RS25795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS25795 PF03466 LysR substrate binding domain KM388_RS25800 PF13411 MerR HTH family regulatory protein KM388_RS25805 PF03358 NADPH-dependent FMN reductase KM388_RS25810 PF12848 ABC transporter KM388_RS25810 PF00005 ABC transporter KM388_RS25815 PF01906 Putative heavy-metal-binding KM388_RS25820 PF00664 ABC transporter transmembrane region KM388_RS25820 PF00005 ABC transporter KM388_RS25825 PF17820 PDZ domain KM388_RS25830 PF03572 Peptidase family S41 KM388_RS25830 PF01471 Putative peptidoglycan binding domain KM388_RS25830 PF17820 PDZ domain KM388_RS25835 PF02687 FtsX-like permease family KM388_RS25835 PF18075 FtsX extracellular domain KM388_RS25840 PF00005 ABC transporter KM388_RS25845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM388_RS25855 PF02810 SEC-C motif KM388_RS25855 PF07517 SecA DEAD-like domain KM388_RS25855 PF01043 SecA preprotein cross-linking domain KM388_RS25855 PF07516 SecA Wing and Scaffold domain KM388_RS25860 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM388_RS25860 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM388_RS25865 PF00313 'Cold-shock' DNA-binding domain KM388_RS25880 PF00877 NlpC/P60 family KM388_RS25880 PF01476 LysM domain KM388_RS25885 PF01638 HxlR-like helix-turn-helix KM388_RS25890 PF02645 Uncharacterised protein, DegV family COG1307 KM388_RS25895 PF09186 Domain of unknown function (DUF1949) KM388_RS25895 PF01205 Uncharacterized protein family UPF0029 KM388_RS25900 PF03816 Cell envelope-related transcriptional attenuator domain KM388_RS25905 PF02350 UDP-N-acetylglucosamine 2-epimerase KM388_RS25910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM388_RS25910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM388_RS25910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM388_RS25915 PF00953 Glycosyl transferase family 4 KM388_RS25920 PF01522 Polysaccharide deacetylase KM388_RS25925 PF00874 PRD domain KM388_RS25925 PF03610 PTS system fructose IIA component KM388_RS25925 PF00158 Sigma-54 interaction domain KM388_RS25935 PF02417 Chromate transporter KM388_RS25940 PF04794 YdjC-like protein KM388_RS25945 PF02056 Family 4 glycosyl hydrolase KM388_RS25945 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM388_RS25950 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM388_RS25955 PF02378 Phosphotransferase system, EIIC KM388_RS25960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM388_RS25970 PF02675 S-adenosylmethionine decarboxylase KM388_RS25975 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM388_RS25980 PF02378 Phosphotransferase system, EIIC KM388_RS25985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM388_RS25990 PF00375 Sodium:dicarboxylate symporter family KM388_RS26000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM388_RS26010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM388_RS26010 PF03466 LysR substrate binding domain KM388_RS26030 PF01654 Cytochrome bd terminal oxidase subunit I KM388_RS26035 PF02322 Cytochrome bd terminal oxidase subunit II KM388_RS26040 PF02040 Arsenical pump membrane protein KM388_RS26045 PF01964 Radical SAM ThiC family KM388_RS26045 PF13667 ThiC-associated domain KM388_RS26050 PF02652 L-lactate permease KM388_RS26060 PF09988 Uncharacterized metal-binding protein (DUF2227) KM388_RS26070 PF00884 Sulfatase KM388_RS26075 PF01063 Amino-transferase class IV KM388_RS26085 PF07662 Na+ dependent nucleoside transporter C-terminus KM388_RS26085 PF01773 Na+ dependent nucleoside transporter N-terminus KM388_RS26100 PF02028 BCCT, betaine/carnitine/choline family transporter KM388_RS26105 PF01476 LysM domain KM388_RS26105 PF06725 3D domain KM388_RS26130 PF04434 SWIM zinc finger KM388_RS26135 PF00176 SNF2 family N-terminal domain KM388_RS26135 PF00271 Helicase conserved C-terminal domain KM388_RS26135 PF12419 SNF2 Helicase protein KM388_RS26165 PF04542 Sigma-70 region 2 KM388_RS26165 PF04545 Sigma-70, region 4 KM388_RS26170 PF04893 Yip1 domain KM388_RS26175 PF02687 FtsX-like permease family KM388_RS26175 PF12704 MacB-like periplasmic core domain KM388_RS26180 PF00005 ABC transporter KM388_RS26200 PF07690 Major Facilitator Superfamily KM388_RS26215 PF16736 Single Cache-like KM388_RS26215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS26215 PF00989 PAS fold KM388_RS26215 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS26220 PF00072 Response regulator receiver domain KM388_RS26220 PF00486 Transcriptional regulatory protein, C terminal KM388_RS26225 PF16363 GDP-mannose 4,6 dehydratase KM388_RS26230 PF03816 Cell envelope-related transcriptional attenuator domain KM388_RS26240 PF07977 FabA-like domain KM388_RS26245 PF02350 UDP-N-acetylglucosamine 2-epimerase KM388_RS26250 PF00005 ABC transporter KM388_RS26250 PF08239 Bacterial SH3 domain KM388_RS26255 PF01061 ABC-2 type transporter KM388_RS26260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM388_RS26260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM388_RS26260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM388_RS26305 PF12116 Stage III sporulation protein D KM388_RS26320 PF01551 Peptidase family M23 KM388_RS26330 PF00005 ABC transporter KM388_RS26340 PF08486 Stage II sporulation protein KM388_RS26345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM388_RS26355 PF06612 Protein of unknown function (DUF1146) KM388_RS26360 PF00361 Proton-conducting membrane transporter KM388_RS26365 PF00361 Proton-conducting membrane transporter KM388_RS26370 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM388_RS26370 PF00361 Proton-conducting membrane transporter KM388_RS26370 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM388_RS26375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM388_RS26380 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM388_RS26390 PF00146 NADH dehydrogenase KM388_RS26395 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM388_RS26400 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM388_RS26405 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM388_RS26410 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM388_RS26415 PF00990 Diguanylate cyclase, GGDEF domain KM388_RS26415 PF03707 Bacterial signalling protein N terminal repeat KM388_RS26415 PF00563 EAL domain KM388_RS26430 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM388_RS26430 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM388_RS26435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM388_RS26435 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM388_RS26440 PF00231 ATP synthase KM388_RS26445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM388_RS26445 PF00306 ATP synthase alpha/beta chain, C terminal domain KM388_RS26445 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM388_RS26450 PF00213 ATP synthase delta (OSCP) subunit KM388_RS26455 PF00430 ATP synthase B/B' CF(0) KM388_RS26460 PF00137 ATP synthase subunit C KM388_RS26465 PF00119 ATP synthase A chain KM388_RS26470 PF03899 ATP synthase I chain KM388_RS26490 PF00464 Serine hydroxymethyltransferase KM388_RS26495 PF04260 Protein of unknown function (DUF436) KM388_RS26500 PF02502 Ribose/Galactose Isomerase KM388_RS26505 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM388_RS26510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM388_RS26515 PF07681 DoxX KM388_RS26520 PF01613 Flavin reductase like domain KM388_RS26530 PF02659 Putative manganese efflux pump KM388_RS26535 PF01300 Telomere recombination KM388_RS26535 PF03481 Putative GTP-binding controlling metal-binding KM388_RS26545 PF09551 Stage II sporulation protein R (spore_II_R) KM388_RS26550 PF13847 Methyltransferase domain KM388_RS26550 PF17827 PrmC N-terminal domain KM388_RS26555 PF03462 PCRF domain KM388_RS26555 PF00472 RF-1 domain KM388_RS26560 PF00265 Thymidine kinase KM388_RS26565 PF01197 Ribosomal protein L31 KM388_RS26570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM388_RS26570 PF07497 Rho termination factor, RNA-binding domain KM388_RS26570 PF07498 Rho termination factor, N-terminal domain KM388_RS26575 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM388_RS26580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM388_RS26585 PF01116 Fructose-bisphosphate aldolase class-II KM388_RS26590 PF00072 Response regulator receiver domain KM388_RS26595 PF10740 Domain of unknown function (DUF2529) KM388_RS26600 PF06418 CTP synthase N-terminus KM388_RS26600 PF00117 Glutamine amidotransferase class-I KM388_RS26605 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM388_RS26615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM388_RS26615 PF02770 Acyl-CoA dehydrogenase, middle domain KM388_RS26615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM388_RS26620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM388_RS26620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM388_RS26620 PF02770 Acyl-CoA dehydrogenase, middle domain KM388_RS26625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM388_RS26625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM388_RS26630 PF02803 Thiolase, C-terminal domain KM388_RS26630 PF00108 Thiolase, N-terminal domain KM388_RS26635 PF02754 Cysteine-rich domain KM388_RS26635 PF13183 4Fe-4S dicluster domain KM388_RS26640 PF13091 PLD-like domain KM388_RS26645 PF03851 UV-endonuclease UvdE KM388_RS26650 PF00990 Diguanylate cyclase, GGDEF domain KM388_RS26650 PF00563 EAL domain KM388_RS26650 PF03707 Bacterial signalling protein N terminal repeat KM388_RS26670 PF00072 Response regulator receiver domain KM388_RS26670 PF00196 Bacterial regulatory proteins, luxR family KM388_RS26675 PF07730 Histidine kinase KM388_RS26675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS26685 PF00005 ABC transporter KM388_RS26690 PF00557 Metallopeptidase family M24 KM388_RS26700 PF02225 PA domain KM388_RS26700 PF04389 Peptidase family M28 KM388_RS26720 PF04542 Sigma-70 region 2 KM388_RS26720 PF08281 Sigma-70, region 4 KM388_RS26725 PF00750 tRNA synthetases class I (R) KM388_RS26725 PF03485 Arginyl tRNA synthetase N terminal domain KM388_RS26725 PF05746 DALR anticodon binding domain KM388_RS26730 PF09148 Domain of unknown function (DUF1934) KM388_RS26735 PF02016 LD-carboxypeptidase N-terminal domain KM388_RS26735 PF17676 LD-carboxypeptidase C-terminal domain KM388_RS26750 PF00491 Arginase family KM388_RS26755 PF17284 Spermidine synthase tetramerisation domain KM388_RS26760 PF07690 Major Facilitator Superfamily KM388_RS26765 PF13411 MerR HTH family regulatory protein KM388_RS26770 PF03009 Glycerophosphoryl diester phosphodiesterase family KM388_RS26775 PF00905 Penicillin binding protein transpeptidase domain KM388_RS26775 PF00912 Transglycosylase KM388_RS26780 PF08741 YwhD family KM388_RS26785 PF02163 Peptidase family M50 KM388_RS26790 PF01361 Tautomerase enzyme KM388_RS26795 PF01966 HD domain KM388_RS26800 PF01497 Periplasmic binding protein KM388_RS26805 PF00005 ABC transporter KM388_RS26810 PF01032 FecCD transport family KM388_RS26815 PF01032 FecCD transport family KM388_RS26820 PF07293 Protein of unknown function (DUF1450) KM388_RS26835 PF03099 Biotin/lipoate A/B protein ligase family KM388_RS26840 PF01515 Phosphate acetyl/butaryl transferase KM388_RS26845 PF06778 Chlorite dismutase KM388_RS26850 PF07943 Penicillin-binding protein 5, C-terminal domain KM388_RS26850 PF00768 D-alanyl-D-alanine carboxypeptidase KM388_RS26855 PF07486 Cell Wall Hydrolase KM388_RS26860 PF09671 Spore coat protein (Spore_GerQ) KM388_RS26865 PF04241 Protein of unknown function (DUF423) KM388_RS26875 PF07885 Ion channel KM388_RS26875 PF02254 TrkA-N domain KM388_RS26880 PF00860 Permease family KM388_RS26890 PF12823 Domain of unknown function (DUF3817) KM388_RS26895 PF03167 Uracil DNA glycosylase superfamily KM388_RS26900 PF12679 ABC-2 family transporter protein KM388_RS26905 PF00005 ABC transporter KM388_RS26910 PF13472 GDSL-like Lipase/Acylhydrolase family KM388_RS26915 PF00356 Bacterial regulatory proteins, lacI family KM388_RS26915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM388_RS26925 PF01842 ACT domain KM388_RS26925 PF00742 Homoserine dehydrogenase KM388_RS26925 PF03447 Homoserine dehydrogenase, NAD binding domain KM388_RS26930 PF04204 Homoserine O-succinyltransferase KM388_RS26935 PF01053 Cys/Met metabolism PLP-dependent enzyme KM388_RS26945 PF13419 Haloacid dehalogenase-like hydrolase KM388_RS26950 PF00027 Cyclic nucleotide-binding domain KM388_RS26955 PF02525 Flavodoxin-like fold KM388_RS26960 PF00196 Bacterial regulatory proteins, luxR family KM388_RS26960 PF00072 Response regulator receiver domain KM388_RS26970 PF08543 Phosphomethylpyrimidine kinase KM388_RS26975 PF07694 5TMR of 5TMR-LYT KM388_RS26975 PF00990 Diguanylate cyclase, GGDEF domain KM388_RS26980 PF04328 Selenoprotein, putative KM388_RS26985 PF02554 Carbon starvation protein CstA KM388_RS26985 PF13722 5TM C-terminal transporter carbon starvation CstA KM388_RS26990 PF04397 LytTr DNA-binding domain KM388_RS26990 PF00072 Response regulator receiver domain KM388_RS26995 PF07690 Major Facilitator Superfamily KM388_RS27000 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM388_RS27015 PF03458 UPF0126 domain KM388_RS27030 PF03061 Thioesterase superfamily KM388_RS27040 PF00535 Glycosyl transferase family 2 KM388_RS27045 PF00005 ABC transporter KM388_RS27045 PF12848 ABC transporter KM388_RS27065 PF00535 Glycosyl transferase family 2 KM388_RS27070 PF00440 Bacterial regulatory proteins, tetR family KM388_RS27075 PF00873 AcrB/AcrD/AcrF family KM388_RS27080 PF01641 SelR domain KM388_RS27080 PF01625 Peptide methionine sulfoxide reductase KM388_RS27085 PF01594 AI-2E family transporter KM388_RS27090 PF04172 LrgB-like family KM388_RS27095 PF03788 LrgA family KM388_RS27100 PF00072 Response regulator receiver domain KM388_RS27100 PF04397 LytTr DNA-binding domain KM388_RS27105 PF06580 Histidine kinase KM388_RS27105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS27105 PF13492 GAF domain KM388_RS27105 PF07694 5TMR of 5TMR-LYT KM388_RS27110 PF07690 Major Facilitator Superfamily KM388_RS27115 PF02028 BCCT, betaine/carnitine/choline family transporter KM388_RS27120 PF02898 Nitric oxide synthase, oxygenase domain KM388_RS27125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM388_RS27125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM388_RS27135 PF02293 AmiS/UreI family transporter KM388_RS27145 PF16363 GDP-mannose 4,6 dehydratase KM388_RS27150 PF03006 Haemolysin-III related KM388_RS27160 PF03880 DbpA RNA binding domain KM388_RS27160 PF00271 Helicase conserved C-terminal domain KM388_RS27160 PF00270 DEAD/DEAH box helicase KM388_RS27170 PF00478 IMP dehydrogenase / GMP reductase domain KM388_RS27175 PF01432 Peptidase family M3 KM388_RS27175 PF08439 Oligopeptidase F KM388_RS27185 PF02590 Predicted SPOUT methyltransferase KM388_RS27195 PF13180 PDZ domain KM388_RS27200 PF00753 Metallo-beta-lactamase superfamily KM388_RS27205 PF09648 YycH protein KM388_RS27210 PF07435 YycH protein KM388_RS27215 PF00672 HAMP domain KM388_RS27215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM388_RS27215 PF00512 His Kinase A (phospho-acceptor) domain KM388_RS27215 PF13426 PAS domain KM388_RS27220 PF00486 Transcriptional regulatory protein, C terminal KM388_RS27220 PF00072 Response regulator receiver domain KM388_RS27245 PF00709 Adenylosuccinate synthetase KM388_RS27250 PF00772 DnaB-like helicase N terminal domain KM388_RS27250 PF03796 DnaB-like helicase C terminal domain KM388_RS27255 PF03948 Ribosomal protein L9, C-terminal domain KM388_RS27255 PF01281 Ribosomal protein L9, N-terminal domain KM388_RS27260 PF01368 DHH family KM388_RS27260 PF02272 DHHA1 domain KM388_RS27265 PF09991 Predicted membrane protein (DUF2232) KM388_RS27270 PF01084 Ribosomal protein S18 KM388_RS27275 PF00436 Single-strand binding protein family KM388_RS27280 PF01250 Ribosomal protein S6 KM388_RS27285 PF06071 Protein of unknown function (DUF933) KM388_RS27285 PF01926 50S ribosome-binding GTPase KM388_RS27290 PF06107 Bacterial protein of unknown function (DUF951) KM388_RS27295 PF00924 Mechanosensitive ion channel KM388_RS27300 PF06866 Protein of unknown function (DUF1256) KM388_RS27305 PF02195 ParB-like nuclease domain KM388_RS27305 PF17762 HTH domain found in ParB protein KM388_RS27310 PF13614 AAA domain KM388_RS27315 PF17762 HTH domain found in ParB protein KM388_RS27315 PF02195 ParB-like nuclease domain KM388_RS27320 PF02527 rRNA small subunit methyltransferase G KM388_RS27325 PF01134 Glucose inhibited division protein A KM388_RS27325 PF13932 GidA associated domain KM388_RS27330 PF10396 GTP-binding protein TrmE N-terminus KM388_RS27330 PF01926 50S ribosome-binding GTPase KM388_RS27330 PF12631 MnmE helical domain KM388_RS27335 PF01424 R3H domain KM388_RS27335 PF14804 Jag N-terminus KM388_RS27340 PF02096 60Kd inner membrane protein KM388_RS27345 PF00825 Ribonuclease P KM388_RS27350 PF00468 Ribosomal protein L34 KM388_RS27365 PF08378 Nuclease-related domain KM388_RS27405 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM388_RS27490 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM388_RS27535 PF18765 Polymerase beta, Nucleotidyltransferase KM388_RS27535 PF13427 Domain of unknown function (DUF4111) KM388_RS27560 PF01609 Transposase DDE domain KM388_RS27565 PF01609 Transposase DDE domain KM388_RS27590 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM388_RS27590 PF17854 FtsK alpha domain KM388_RS27590 PF09397 Ftsk gamma domain KM388_RS27590 PF01580 FtsK/SpoIIIE family KM388_RS27605 PF00091 Tubulin/FtsZ family, GTPase domain KM388_RS27810 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) KM388_RS27825 PF04235 Protein of unknown function (DUF418) KM388_RS27845 PF00395 S-layer homology domain KM388_RS27850 PF01569 PAP2 superfamily KM388_RS27870 PF00483 Nucleotidyl transferase KM388_RS27875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM388_RS27875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM388_RS27875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM388_RS27920 PF03497 Anthrax toxin LF subunit KM388_RS27920 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM388_RS27945 PF00874 PRD domain KM388_RS27945 PF05043 Mga helix-turn-helix domain KM388_RS27945 PF08279 HTH domain KM388_RS27970 PF13700 Domain of unknown function (DUF4158) KM388_RS27970 PF01526 Tn3 transposase DDE domain KM388_RS27975 PF00239 Resolvase, N terminal domain KM388_RS27975 PF02796 Helix-turn-helix domain of resolvase KM388_RS27980 PF03845 Spore germination protein KM388_RS27985 PF03323 Bacillus/Clostridium GerA spore germination protein KM388_RS27990 PF05504 Spore germination B3/ GerAC like, C-terminal KM388_RS28000 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 KM388_RS28000 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 KM388_RS28000 PF07691 PA14 domain KM388_RS28000 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain KM388_RS28005 PF01022 Bacterial regulatory protein, arsR family KM388_RS28025 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM388_RS28025 PF09156 Anthrax toxin lethal factor, middle domain KM388_RS28040 PF18277 AbrB C-terminal domain KM388_RS28040 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM388_RS28050 PF00589 Phage integrase family KM388_RS28050 PF02899 Phage integrase, N-terminal SAM-like domain KM388_RS28085 PF14436 Bacterial EndoU nuclease KM388_RS28085 PF04740 LXG domain of WXG superfamily KM388_RS28110 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM388_RS28115 PF00589 Phage integrase family KM388_RS28140 PF18801 response regulator aspartate phosphatase H, N terminal KM388_RS28150 PF17209 Hfq protein KM388_RS28155 PF01022 Bacterial regulatory protein, arsR family KM388_RS28160 PF02600 Disulfide bond formation protein DsbB KM388_RS28175 PF00565 Staphylococcal nuclease homologue KM388_RS28180 PF01751 Toprim domain KM388_RS28180 PF01131 DNA topoisomerase KM388_RS28180 PF13342 C-terminal repeat of topoisomerase KM388_RS28195 PF08708 Primase C terminal 1 (PriCT-1) KM388_RS28220 PF17362 Family of unknown function KM388_RS28235 PF17631 Family of unknown function (DUF5512) KM388_RS28270 PF00437 Type II/IV secretion system protein KM388_RS28300 PF04956 TrbC/VIRB2 family KM388_RS28355 PF17632 Family of unknown function (DUF5513) KM388_RS28380 PF17633 Family of unknown function (DUF5514) KM388_RS28385 PF17630 Family of unknown function (DUF5511) KM388_RS28390 PF18840 Large polyvalent protein associated domain 25 KM388_RS28405 PF13154 Protein of unknown function (DUF3991) KM388_RS28445 PF17443 Uncharacterized protein pXO2-72 KM388_RS28465 PF11798 IMS family HHH motif KM388_RS28465 PF00817 impB/mucB/samB family KM388_RS28465 PF11799 impB/mucB/samB family C-terminal domain KM388_RS28470 PF13152 Protein of unknown function (DUF3967) KM388_RS28470 PF13411 MerR HTH family regulatory protein KM388_RS28475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM388_RS28505 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM388_RS28505 PF05043 Mga helix-turn-helix domain KM388_RS28505 PF00874 PRD domain KM388_RS28520 PF01810 LysE type translocator KM388_RS28535 PF08279 HTH domain KM388_RS28535 PF05043 Mga helix-turn-helix domain KM388_RS28535 PF00874 PRD domain KM388_RS28540 PF08279 HTH domain KM388_RS28540 PF00874 PRD domain KM388_RS28540 PF05043 Mga helix-turn-helix domain KM388_RS28545 PF09385 Histidine kinase N terminal KM388_RS28555 PF10502 Signal peptidase, peptidase S26 KM388_RS28570 PF01022 Bacterial regulatory protein, arsR family KM388_RS28580 PF08245 Mur ligase middle domain KM388_RS28585 PF14102 Capsule biosynthesis CapC KM388_RS28590 PF09587 Bacterial capsule synthesis protein PGA_cap KM388_RS28610 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM388_RS28610 PF05043 Mga helix-turn-helix domain KM388_RS28630 PF00440 Bacterial regulatory proteins, tetR family KM388_RS28635 PF04463 Protein of unknown function (DUF523) KM388_RS28640 PF02517 CPBP intramembrane metalloprotease KM388_RS28645 PF01906 Putative heavy-metal-binding KM388_RS28665 PF01520 N-acetylmuramoyl-L-alanine amidase KM388_RS28665 PF00395 S-layer homology domain KM388_RS28680 PF13614 AAA domain