locus-tag	class	description
BF39_RS00020	PF10042	Uncharacterized conserved protein (DUF2278)
BF39_RS00270	PF13556	PucR C-terminal helix-turn-helix domain
BF39_RS00270	PF17853	GGDEF-like domain
BF39_RS00270	PF05651	Putative sugar diacid recognition
BF39_RS00285	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS00285	PF00672	HAMP domain
BF39_RS00285	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS00455	PF12867	DinB superfamily
BF39_RS00550	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BF39_RS00550	PF00364	Biotin-requiring enzyme
BF39_RS00550	PF02817	e3 binding domain
BF39_RS00730	PF02754	Cysteine-rich domain
BF39_RS00730	PF13183	4Fe-4S dicluster domain
BF39_RS00975	PF00005	ABC transporter
BF39_RS01115	PF01063	Amino-transferase class IV
BF39_RS01145	PF13393	Histidyl-tRNA synthetase
BF39_RS01155	PF01634	ATP phosphoribosyltransferase
BF39_RS01210	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
BF39_RS01210	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BF39_RS01215	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
BF39_RS01215	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BF39_RS01340	PF00291	Pyridoxal-phosphate dependent enzyme
BF39_RS01345	PF00290	Tryptophan synthase alpha chain
BF39_RS01355	PF02652	L-lactate permease
BF39_RS01360	PF10042	Uncharacterized conserved protein (DUF2278)
BF39_RS01380	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS01380	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF39_RS01410	PF02817	e3 binding domain
BF39_RS01410	PF00364	Biotin-requiring enzyme
BF39_RS01410	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BF39_RS01415	PF16870	2-oxoglutarate dehydrogenase C-terminal
BF39_RS01415	PF00676	Dehydrogenase E1 component
BF39_RS01415	PF02779	Transketolase, pyrimidine binding domain
BF39_RS01420	PF01381	Helix-turn-helix
BF39_RS01480	PF13649	Methyltransferase domain
BF39_RS01490	PF07943	Penicillin-binding protein 5, C-terminal domain
BF39_RS01490	PF00768	D-alanyl-D-alanine carboxypeptidase
BF39_RS01500	PF12389	Camelysin metallo-endopeptidase
BF39_RS01510	PF12389	Camelysin metallo-endopeptidase
BF39_RS01515	PF01381	Helix-turn-helix
BF39_RS01515	PF08671	Anti-repressor SinI
BF39_RS01525	PF05547	Immune inhibitor A peptidase M6
BF39_RS01530	PF00171	Aldehyde dehydrogenase family
BF39_RS01535	PF00005	ABC transporter
BF39_RS01535	PF08402	TOBE domain
BF39_RS01540	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS01545	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS01550	PF13416	Bacterial extracellular solute-binding protein
BF39_RS01560	PF03176	MMPL family
BF39_RS01570	PF01479	S4 domain
BF39_RS01570	PF00849	RNA pseudouridylate synthase
BF39_RS01580	PF00188	Cysteine-rich secretory protein family
BF39_RS01585	PF13183	4Fe-4S dicluster domain
BF39_RS01585	PF02754	Cysteine-rich domain
BF39_RS01590	PF01565	FAD binding domain 
BF39_RS01590	PF02913	FAD linked oxidases, C-terminal domain
BF39_RS01595	PF05651	Putative sugar diacid recognition
BF39_RS01595	PF17853	GGDEF-like domain
BF39_RS01595	PF13556	PucR C-terminal helix-turn-helix domain
BF39_RS01605	PF00072	Response regulator receiver domain
BF39_RS01605	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS01610	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS01610	PF00989	PAS fold
BF39_RS01610	PF18698	Histidine kinase sensor domain
BF39_RS01610	PF00672	HAMP domain
BF39_RS01610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS01615	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS01615	PF07729	FCD domain
BF39_RS01620	PF02754	Cysteine-rich domain
BF39_RS01625	PF13183	4Fe-4S dicluster domain
BF39_RS01625	PF02589	LUD domain
BF39_RS01625	PF11870	Domain of unknown function (DUF3390)
BF39_RS01630	PF02589	LUD domain
BF39_RS01635	PF01478	Type IV leader peptidase family
BF39_RS01635	PF06750	Bacterial Peptidase A24 N-terminal domain
BF39_RS01645	PF01226	Formate/nitrite transporter
BF39_RS01650	PF03741	Integral membrane protein TerC family
BF39_RS01660	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF39_RS01665	PF01575	MaoC like domain
BF39_RS01690	PF00561	alpha/beta hydrolase fold
BF39_RS01695	PF01266	FAD dependent oxidoreductase
BF39_RS01700	PF02386	Cation transport protein
BF39_RS01725	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS01730	PF13419	Haloacid dehalogenase-like hydrolase
BF39_RS01735	PF00266	Aminotransferase class-V
BF39_RS01745	PF08220	DeoR-like helix-turn-helix domain
BF39_RS01745	PF00455	DeoR C terminal sensor domain
BF39_RS01770	PF04748	Divergent polysaccharide deacetylase
BF39_RS01775	PF09388	Spo0E like sporulation regulatory protein
BF39_RS01780	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS01780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS01780	PF02743	Cache domain
BF39_RS01785	PF01047	MarR family
BF39_RS01795	PF12867	DinB superfamily
BF39_RS01805	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS01805	PF13188	PAS domain
BF39_RS01805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS01805	PF00989	PAS fold
BF39_RS01805	PF13426	PAS domain
BF39_RS01810	PF06508	Queuosine biosynthesis protein QueC
BF39_RS01815	PF01242	6-pyruvoyl tetrahydropterin synthase
BF39_RS01820	PF04055	Radical SAM superfamily
BF39_RS01825	PF14489	QueF-like protein
BF39_RS01830	PF09953	Uncharacterized protein conserved in bacteria (DUF2187)
BF39_RS01865	PF07972	NrdI Flavodoxin like 
BF39_RS01880	PF02867	Ribonucleotide reductase, barrel domain
BF39_RS01880	PF00317	Ribonucleotide reductase, all-alpha domain
BF39_RS01880	PF08343	Ribonucleotide reductase N-terminal
BF39_RS01885	PF00268	Ribonucleotide reductase, small chain
BF39_RS01890	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS01895	PF00005	ABC transporter
BF39_RS01905	PF00005	ABC transporter
BF39_RS01925	PF01037	Lrp/AsnC ligand binding domain
BF39_RS01935	PF00857	Isochorismatase family
BF39_RS01945	PF17676	LD-carboxypeptidase C-terminal domain
BF39_RS01945	PF02016	LD-carboxypeptidase N-terminal domain
BF39_RS01950	PF03060	Nitronate monooxygenase
BF39_RS01955	PF04914	DltD protein
BF39_RS01960	PF00550	Phosphopantetheine attachment site
BF39_RS01965	PF03062	MBOAT, membrane-bound O-acyltransferase family
BF39_RS01970	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS01970	PF00501	AMP-binding enzyme
BF39_RS01980	PF07687	Peptidase dimerisation domain
BF39_RS01980	PF01546	Peptidase family M20/M25/M40
BF39_RS01990	PF00258	Flavodoxin
BF39_RS02005	PF01636	Phosphotransferase enzyme family
BF39_RS02025	PF01554	MatE
BF39_RS02030	PF02673	Bacitracin resistance protein BacA
BF39_RS02045	PF01047	MarR family
BF39_RS02055	PF00375	Sodium:dicarboxylate symporter family
BF39_RS02060	PF02386	Cation transport protein
BF39_RS02070	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
BF39_RS02085	PF03698	Uncharacterised protein family (UPF0180)
BF39_RS02100	PF01063	Amino-transferase class IV
BF39_RS02105	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF39_RS02105	PF00205	Thiamine pyrophosphate enzyme, central domain
BF39_RS02105	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF39_RS02110	PF01842	ACT domain
BF39_RS02110	PF10369	Small subunit of acetolactate synthase
BF39_RS02115	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
BF39_RS02115	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
BF39_RS02120	PF00682	HMGL-like
BF39_RS02120	PF08502	LeuA allosteric (dimerisation) domain
BF39_RS02125	PF00180	Isocitrate/isopropylmalate dehydrogenase
BF39_RS02130	PF00330	Aconitase family (aconitate hydratase)
BF39_RS02135	PF00694	Aconitase C-terminal domain
BF39_RS02140	PF13393	Histidyl-tRNA synthetase
BF39_RS02145	PF01634	ATP phosphoribosyltransferase
BF39_RS02150	PF00815	Histidinol dehydrogenase
BF39_RS02155	PF00475	Imidazoleglycerol-phosphate dehydratase
BF39_RS02160	PF00117	Glutamine amidotransferase class-I
BF39_RS02165	PF00977	Histidine biosynthesis protein
BF39_RS02170	PF00977	Histidine biosynthesis protein
BF39_RS02175	PF01502	Phosphoribosyl-AMP cyclohydrolase
BF39_RS02180	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
BF39_RS02185	PF02811	PHP domain
BF39_RS02195	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BF39_RS02195	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BF39_RS02200	PF01066	CDP-alcohol phosphatidyltransferase
BF39_RS02205	PF00884	Sulfatase
BF39_RS02215	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
BF39_RS02215	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BF39_RS02225	PF01507	Phosphoadenosine phosphosulfate reductase family
BF39_RS02230	PF14306	PUA-like domain
BF39_RS02230	PF01747	ATP-sulfurylase
BF39_RS02240	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BF39_RS02240	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BF39_RS02250	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BF39_RS02255	PF01903	CbiX
BF39_RS02270	PF00209	Sodium:neurotransmitter symporter family
BF39_RS02280	PF00375	Sodium:dicarboxylate symporter family
BF39_RS02290	PF03553	Na+/H+ antiporter family
BF39_RS02305	PF09922	Cell wall-active antibiotics response 4TMS YvqF
BF39_RS02310	PF00672	HAMP domain
BF39_RS02310	PF07730	Histidine kinase
BF39_RS02310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS02315	PF00196	Bacterial regulatory proteins, luxR family
BF39_RS02315	PF00072	Response regulator receiver domain
BF39_RS02325	PF05525	Branched-chain amino acid transport protein
BF39_RS02335	PF08241	Methyltransferase domain
BF39_RS02360	PF00970	Oxidoreductase FAD-binding domain
BF39_RS02360	PF00042	Globin
BF39_RS02360	PF00175	Oxidoreductase NAD-binding domain 
BF39_RS02380	PF01925	Sulfite exporter TauE/SafE
BF39_RS02385	PF01384	Phosphate transporter family
BF39_RS02390	PF01865	Protein of unknown function DUF47
BF39_RS02395	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS02395	PF00912	Transglycosylase
BF39_RS02410	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS02410	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS02410	PF00989	PAS fold
BF39_RS02415	PF01904	Protein of unknown function DUF72
BF39_RS02425	PF00589	Phage integrase family
BF39_RS02430	PF16736	Single Cache-like 
BF39_RS02430	PF00989	PAS fold
BF39_RS02430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS02430	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS02435	PF01048	Phosphorylase superfamily
BF39_RS02450	PF03706	Lysylphosphatidylglycerol synthase TM region
BF39_RS02450	PF09924	Uncharacterised conserved protein (DUF2156)
BF39_RS02465	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BF39_RS02465	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BF39_RS02470	PF00768	D-alanyl-D-alanine carboxypeptidase
BF39_RS02470	PF07943	Penicillin-binding protein 5, C-terminal domain
BF39_RS02475	PF07670	Nucleoside recognition
BF39_RS02480	PF07670	Nucleoside recognition
BF39_RS02485	PF01479	S4 domain
BF39_RS02485	PF00849	RNA pseudouridylate synthase
BF39_RS02490	PF00578	AhpC/TSA family
BF39_RS02495	PF05140	ResB-like family 
BF39_RS02500	PF01578	Cytochrome C assembly protein
BF39_RS02505	PF00072	Response regulator receiver domain
BF39_RS02505	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS02510	PF00989	PAS fold
BF39_RS02510	PF18698	Histidine kinase sensor domain
BF39_RS02510	PF00672	HAMP domain
BF39_RS02510	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS02510	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS02515	PF01923	Cobalamin adenosyltransferase
BF39_RS02530	PF12822	ECF transporter, substrate-specific component
BF39_RS02545	PF00270	DEAD/DEAH box helicase
BF39_RS02545	PF00271	Helicase conserved C-terminal domain
BF39_RS02550	PF02517	CPBP intramembrane metalloprotease
BF39_RS02565	PF02607	B12 binding domain
BF39_RS02565	PF13411	MerR HTH family regulatory protein
BF39_RS02565	PF02310	B12 binding domain
BF39_RS02570	PF05389	Negative regulator of genetic competence (MecA)
BF39_RS02575	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BF39_RS02575	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BF39_RS02600	PF17763	Glutaminase/Asparaginase C-terminal domain
BF39_RS02600	PF00710	Asparaginase, N-terminal
BF39_RS02610	PF02224	Cytidylate kinase
BF39_RS02615	PF00575	S1 RNA binding domain
BF39_RS02620	PF01070	FMN-dependent dehydrogenase
BF39_RS02625	PF14140	YpzI-like protein
BF39_RS02635	PF14045	YIEGIA protein
BF39_RS02645	PF01926	50S ribosome-binding GTPase
BF39_RS02645	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
BF39_RS02650	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
BF39_RS02650	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
BF39_RS02660	PF10966	Protein of unknown function (DUF2768)
BF39_RS02670	PF09547	Stage IV sporulation protein A (spore_IV_A)
BF39_RS02675	PF00216	Bacterial DNA-binding protein
BF39_RS02680	PF01227	GTP cyclohydrolase I
BF39_RS02685	PF07307	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
BF39_RS02690	PF01209	ubiE/COQ5 methyltransferase family
BF39_RS02695	PF00348	Polyprenyl synthetase
BF39_RS02700	PF00334	Nucleoside diphosphate kinase
BF39_RS02705	PF01264	Chorismate synthase
BF39_RS02710	PF01761	3-dehydroquinate synthase
BF39_RS02715	PF00155	Aminotransferase class I and II
BF39_RS02725	PF08858	IDEAL domain
BF39_RS02725	PF08864	UPF0302 domain
BF39_RS02730	PF10673	Protein of unknown function (DUF2487)
BF39_RS02735	PF00355	Rieske [2Fe-2S] domain
BF39_RS02740	PF00033	Cytochrome b/b6/petB
BF39_RS02745	PF00032	Cytochrome b(C-terminal)/b6/petD
BF39_RS02745	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BF39_RS02750	PF07187	Protein of unknown function (DUF1405)
BF39_RS02760	PF09577	Sporulation protein YpjB (SpoYpjB)
BF39_RS02765	PF04298	Putative neutral zinc metallopeptidase
BF39_RS02775	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS02775	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF39_RS02780	PF03819	MazG nucleotide pyrophosphohydrolase domain
BF39_RS02785	PF01113	Dihydrodipicolinate reductase, N-terminus
BF39_RS02785	PF05173	Dihydrodipicolinate reductase, C-terminus
BF39_RS02790	PF02142	MGS-like domain
BF39_RS02795	PF02585	GlcNAc-PI de-N-acetylase
BF39_RS02800	PF13439	Glycosyltransferase Family 4
BF39_RS02800	PF00534	Glycosyl transferases group 1
BF39_RS02805	PF01743	Poly A polymerase head domain
BF39_RS02805	PF12627	Probable RNA and SrmB- binding site of polymerase A
BF39_RS02805	PF13735	tRNA nucleotidyltransferase domain 2 putative
BF39_RS02810	PF02237	Biotin protein ligase C terminal domain
BF39_RS02810	PF08279	HTH domain
BF39_RS02810	PF03099	Biotin/lipoate A/B protein ligase family
BF39_RS02825	PF02548	Ketopantoate hydroxymethyltransferase
BF39_RS02830	PF02569	Pantoate-beta-alanine ligase
BF39_RS02835	PF02261	Aspartate decarboxylase
BF39_RS02840	PF04851	Type III restriction enzyme, res subunit
BF39_RS02840	PF13307	Helicase C-terminal domain
BF39_RS02840	PF00929	Exonuclease
BF39_RS02845	PF14084	Protein of unknown function (DUF4264)
BF39_RS02855	PF00155	Aminotransferase class I and II
BF39_RS02860	PF07261	Replication initiation and membrane attachment
BF39_RS02865	PF00730	HhH-GPD superfamily base excision DNA repair protein
BF39_RS02865	PF00633	Helix-hairpin-helix motif
BF39_RS02865	PF10576	Iron-sulfur binding domain of endonuclease III
BF39_RS02875	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS02875	PF00912	Transglycosylase
BF39_RS02880	PF03838	Recombination protein U
BF39_RS02885	PF10720	Protein of unknown function (DUF2515)
BF39_RS02915	PF06908	YspA SLOG family
BF39_RS02920	PF05103	DivIVA protein
BF39_RS02925	PF02926	THUMP domain
BF39_RS02925	PF01170	Putative RNA methylase family UPF0020
BF39_RS02935	PF13307	Helicase C-terminal domain
BF39_RS02940	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
BF39_RS02950	PF01636	Phosphotransferase enzyme family
BF39_RS02955	PF00557	Metallopeptidase family M24
BF39_RS02960	PF00156	Phosphoribosyl transferase domain
BF39_RS02965	PF00860	Permease family
BF39_RS02970	PF04235	Protein of unknown function (DUF418)
BF39_RS02975	PF00350	Dynamin family
BF39_RS02985	PF00583	Acetyltransferase (GNAT) family
BF39_RS02990	PF10752	Protein of unknown function (DUF2533) 
BF39_RS02995	PF00581	Rhodanese-like domain
BF39_RS03010	PF03738	Glutathionylspermidine synthase preATP-grasp
BF39_RS03020	PF00690	Cation transporter/ATPase, N-terminus
BF39_RS03020	PF00689	Cation transporting ATPase, C-terminus
BF39_RS03025	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BF39_RS03025	PF01367	5'-3' exonuclease, C-terminal SAM fold
BF39_RS03050	PF02397	Bacterial sugar transferase
BF39_RS03065	PF00535	Glycosyl transferase family 2
BF39_RS03070	PF00534	Glycosyl transferases group 1
BF39_RS03070	PF13439	Glycosyltransferase Family 4
BF39_RS03085	PF18014	Acetyltransferase (GNAT) domain
BF39_RS03085	PF13673	Acetyltransferase (GNAT) domain
BF39_RS03105	PF13456	Reverse transcriptase-like
BF39_RS03110	PF01263	Aldose 1-epimerase
BF39_RS03135	PF00313	'Cold-shock' DNA-binding domain
BF39_RS03145	PF01810	LysE type translocator
BF39_RS03160	PF04341	Protein of unknown function, DUF485
BF39_RS03165	PF00474	Sodium:solute symporter family
BF39_RS03170	PF00202	Aminotransferase class-III
BF39_RS03180	PF00999	Sodium/hydrogen exchanger family
BF39_RS03185	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
BF39_RS03185	PF00753	Metallo-beta-lactamase superfamily
BF39_RS03185	PF17770	Ribonuclease J C-terminal domain
BF39_RS03190	PF06445	GyrI-like small molecule binding domain
BF39_RS03190	PF13411	MerR HTH family regulatory protein
BF39_RS03200	PF04239	Protein of unknown function (DUF421)
BF39_RS03205	PF02698	DUF218 domain
BF39_RS03215	PF00881	Nitroreductase family
BF39_RS03260	PF17209	Hfq protein
BF39_RS03275	PF00691	OmpA family
BF39_RS03275	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
BF39_RS03280	PF00072	Response regulator receiver domain
BF39_RS03290	PF04509	CheC-like family
BF39_RS03290	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
BF39_RS03305	PF01739	CheR methyltransferase, SAM binding domain
BF39_RS03305	PF03705	CheR methyltransferase, all-alpha domain
BF39_RS03335	PF00700	Bacterial flagellin C-terminal helical region
BF39_RS03335	PF00669	Bacterial flagellin N-terminal helical region
BF39_RS03360	PF00460	Flagella basal body rod protein
BF39_RS03365	PF00460	Flagella basal body rod protein
BF39_RS03365	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BF39_RS03370	PF02049	Flagellar hook-basal body complex protein FliE
BF39_RS03375	PF01514	Secretory protein of YscJ/FliF family
BF39_RS03375	PF08345	Flagellar M-ring protein C-terminal
BF39_RS03385	PF14842	FliG N-terminal domain
BF39_RS03385	PF01706	FliG C-terminal domain
BF39_RS03385	PF14841	FliG middle domain
BF39_RS03395	PF18269	T3SS EscN ATPase C-terminal domain
BF39_RS03395	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BF39_RS03395	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BF39_RS03420	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BF39_RS03420	PF07559	Flagellar basal body protein FlaE
BF39_RS03420	PF00460	Flagella basal body rod protein
BF39_RS03435	PF01584	CheW-like domain
BF39_RS03435	PF00072	Response regulator receiver domain
BF39_RS03440	PF12181	DNA binding domain of the motility gene repressor (MogR)
BF39_RS03445	PF00535	Glycosyl transferase family 2
BF39_RS03475	PF00535	Glycosyl transferase family 2
BF39_RS03475	PF13181	Tetratricopeptide repeat
BF39_RS03500	PF00700	Bacterial flagellin C-terminal helical region
BF39_RS03500	PF00669	Bacterial flagellin N-terminal helical region
BF39_RS03505	PF01464	Transglycosylase SLT domain
BF39_RS03520	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
BF39_RS03520	PF04509	CheC-like family
BF39_RS03530	PF00813	FliP family
BF39_RS03535	PF01313	Bacterial export proteins, family 3
BF39_RS03545	PF01312	FlhB HrpN YscU SpaS Family
BF39_RS03550	PF00771	FHIPEP family
BF39_RS03555	PF00448	SRP54-type protein, GTPase domain
BF39_RS03560	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BF39_RS03560	PF00460	Flagella basal body rod protein
BF39_RS03565	PF02272	DHHA1 domain
BF39_RS03565	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BF39_RS03565	PF01411	tRNA synthetases class II (A)
BF39_RS03590	PF17932	Tetracyclin repressor-like, C-terminal domain
BF39_RS03590	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS03595	PF17329	Family of unknown function (DUF5367)
BF39_RS03610	PF03992	Antibiotic biosynthesis monooxygenase
BF39_RS03615	PF08141	Small acid-soluble spore protein H family
BF39_RS03635	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS03635	PF03466	LysR substrate binding domain
BF39_RS03640	PF08402	TOBE domain
BF39_RS03640	PF00005	ABC transporter
BF39_RS03650	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS03655	PF12706	Beta-lactamase superfamily domain
BF39_RS03655	PF00753	Metallo-beta-lactamase superfamily
BF39_RS03665	PF10787	Uncharacterised protein from bacillus cereus group
BF39_RS03680	PF00768	D-alanyl-D-alanine carboxypeptidase
BF39_RS03680	PF07943	Penicillin-binding protein 5, C-terminal domain
BF39_RS03690	PF00300	Histidine phosphatase superfamily (branch 1)
BF39_RS03720	PF00733	Asparagine synthase
BF39_RS03720	PF13537	Glutamine amidotransferase domain
BF39_RS03740	PF01545	Cation efflux family
BF39_RS03740	PF16916	Dimerisation domain of Zinc Transporter
BF39_RS03750	PF07729	FCD domain
BF39_RS03750	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS03755	PF00892	EamA-like transporter family
BF39_RS03760	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BF39_RS03760	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BF39_RS03765	PF03773	Predicted permease
BF39_RS03775	PF00535	Glycosyl transferase family 2
BF39_RS03780	PF03553	Na+/H+ antiporter family
BF39_RS03785	PF10415	Fumarase C C-terminus
BF39_RS03785	PF00206	Lyase
BF39_RS03815	PF03575	Peptidase family S51
BF39_RS03835	PF02683	Cytochrome C biogenesis protein transmembrane region
BF39_RS03840	PF00578	AhpC/TSA family
BF39_RS03865	PF00291	Pyridoxal-phosphate dependent enzyme
BF39_RS03870	PF04286	Protein of unknown function (DUF445)
BF39_RS03895	PF00196	Bacterial regulatory proteins, luxR family
BF39_RS03895	PF00072	Response regulator receiver domain
BF39_RS03900	PF07730	Histidine kinase
BF39_RS03900	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS03900	PF13492	GAF domain
BF39_RS03900	PF13185	GAF domain
BF39_RS03905	PF00005	ABC transporter
BF39_RS03920	PF13091	PLD-like domain
BF39_RS03925	PF00696	Amino acid kinase family
BF39_RS03930	PF00375	Sodium:dicarboxylate symporter family
BF39_RS03935	PF10415	Fumarase C C-terminus
BF39_RS03935	PF00206	Lyase
BF39_RS03940	PF03949	Malic enzyme, NAD binding domain
BF39_RS03940	PF00390	Malic enzyme, N-terminal domain
BF39_RS03945	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS03950	PF00072	Response regulator receiver domain
BF39_RS03950	PF08664	YcbB domain
BF39_RS03955	PF04434	SWIM zinc finger
BF39_RS03955	PF00271	Helicase conserved C-terminal domain
BF39_RS03955	PF00176	SNF2 family N-terminal domain
BF39_RS03975	PF03590	Aspartate-ammonia ligase
BF39_RS03990	PF00696	Amino acid kinase family
BF39_RS03990	PF13840	ACT domain 
BF39_RS04005	PF13761	Domain of unknown function (DUF4166)
BF39_RS04010	PF14158	YndJ-like protein
BF39_RS04015	PF00293	NUDIX domain
BF39_RS04020	PF02368	Bacterial Ig-like domain (group 2)
BF39_RS04020	PF13205	Bacterial Ig-like domain
BF39_RS04020	PF00395	S-layer homology domain
BF39_RS04030	PF07690	Major Facilitator Superfamily
BF39_RS04045	PF02554	Carbon starvation protein CstA
BF39_RS04050	PF03976	Polyphosphate kinase 2 (PPK2)
BF39_RS04070	PF01926	50S ribosome-binding GTPase
BF39_RS04070	PF13167	GTP-binding GTPase N-terminal
BF39_RS04070	PF16360	GTP-binding GTPase Middle Region
BF39_RS04080	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS04085	PF07690	Major Facilitator Superfamily
BF39_RS04090	PF00291	Pyridoxal-phosphate dependent enzyme
BF39_RS04105	PF01943	Polysaccharide biosynthesis protein
BF39_RS04105	PF14667	Polysaccharide biosynthesis C-terminal domain
BF39_RS04110	PF00209	Sodium:neurotransmitter symporter family
BF39_RS04115	PF00457	Glycosyl hydrolases family 11
BF39_RS04115	PF01522	Polysaccharide deacetylase
BF39_RS04115	PF03422	Carbohydrate binding module (family 6)
BF39_RS04125	PF04239	Protein of unknown function (DUF421)
BF39_RS04140	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BF39_RS04140	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BF39_RS04155	PF01625	Peptide methionine sulfoxide reductase
BF39_RS04165	PF01063	Amino-transferase class IV
BF39_RS04170	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF39_RS04170	PF00205	Thiamine pyrophosphate enzyme, central domain
BF39_RS04170	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF39_RS04175	PF10369	Small subunit of acetolactate synthase
BF39_RS04180	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
BF39_RS04180	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
BF39_RS04185	PF00920	Dehydratase family
BF39_RS04190	PF00585	C-terminal regulatory domain of Threonine dehydratase
BF39_RS04190	PF00291	Pyridoxal-phosphate dependent enzyme
BF39_RS04200	PF09587	Bacterial capsule synthesis protein PGA_cap
BF39_RS04215	PF07690	Major Facilitator Superfamily
BF39_RS04220	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
BF39_RS04230	PF00072	Response regulator receiver domain
BF39_RS04230	PF04397	LytTr DNA-binding domain
BF39_RS04235	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
BF39_RS04235	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
BF39_RS04250	PF01979	Amidohydrolase family
BF39_RS04255	PF12146	Serine aminopeptidase, S33
BF39_RS04255	PF13026	Protein of unknown function (DUF3887)
BF39_RS04260	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS04285	PF13186	Iron-sulfur cluster-binding domain
BF39_RS04285	PF04055	Radical SAM superfamily
BF39_RS04290	PF13302	Acetyltransferase (GNAT) domain
BF39_RS04295	PF00072	Response regulator receiver domain
BF39_RS04295	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS04310	PF01566	Natural resistance-associated macrophage protein
BF39_RS04315	PF00581	Rhodanese-like domain
BF39_RS04315	PF17773	UPF0176 acylphosphatase like domain
BF39_RS04315	PF12368	Rhodanase C-terminal
BF39_RS04325	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BF39_RS04325	PF02558	Ketopantoate reductase PanE/ApbA
BF39_RS04345	PF05791	Bacillus haemolytic enterotoxin (HBL)
BF39_RS04350	PF05791	Bacillus haemolytic enterotoxin (HBL)
BF39_RS04360	PF04198	Putative sugar-binding domain
BF39_RS04365	PF01791	DeoC/LacD family aldolase
BF39_RS04370	PF01773	Na+ dependent nucleoside transporter N-terminus
BF39_RS04370	PF07662	Na+ dependent nucleoside transporter C-terminus
BF39_RS04375	PF02885	Glycosyl transferase family, helical bundle domain
BF39_RS04375	PF00591	Glycosyl transferase family, a/b domain
BF39_RS04375	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
BF39_RS04380	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BF39_RS04390	PF05979	Bacterial protein of unknown function (DUF896)
BF39_RS04410	PF05195	Aminopeptidase P, N-terminal domain
BF39_RS04410	PF00557	Metallopeptidase family M24
BF39_RS04420	PF01551	Peptidase family M23
BF39_RS04430	PF01396	Topoisomerase DNA binding C4 zinc finger
BF39_RS04430	PF01751	Toprim domain
BF39_RS04430	PF13342	C-terminal repeat of topoisomerase
BF39_RS04430	PF01131	DNA topoisomerase
BF39_RS04445	PF02525	Flavodoxin-like fold
BF39_RS04460	PF13115	YtkA-like
BF39_RS04460	PF05425	Copper resistance protein D
BF39_RS04460	PF04234	CopC domain
BF39_RS04465	PF07987	Domain of unkown function (DUF1775)
BF39_RS04475	PF00892	EamA-like transporter family
BF39_RS04480	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS04480	PF03466	LysR substrate binding domain
BF39_RS04485	PF02082	Transcriptional regulator
BF39_RS04490	PF01323	DSBA-like thioredoxin domain
BF39_RS04495	PF00881	Nitroreductase family
BF39_RS04505	PF01425	Amidase
BF39_RS04510	PF01594	AI-2E family transporter
BF39_RS04515	PF00056	lactate/malate dehydrogenase, NAD binding domain
BF39_RS04515	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BF39_RS04520	PF01593	Flavin containing amine oxidoreductase
BF39_RS04525	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BF39_RS04525	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BF39_RS04540	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS04540	PF00501	AMP-binding enzyme
BF39_RS04545	PF01575	MaoC like domain
BF39_RS04550	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BF39_RS04550	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BF39_RS04560	PF12399	Branched-chain amino acid ATP-binding cassette transporter
BF39_RS04560	PF00005	ABC transporter
BF39_RS04565	PF00005	ABC transporter
BF39_RS04570	PF02653	Branched-chain amino acid transport system / permease component
BF39_RS04580	PF03466	LysR substrate binding domain
BF39_RS04580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS04600	PF01047	MarR family
BF39_RS04610	PF01654	Cytochrome bd terminal oxidase subunit I
BF39_RS04615	PF02322	Cytochrome bd terminal oxidase subunit II
BF39_RS04620	PF00664	ABC transporter transmembrane region
BF39_RS04620	PF00005	ABC transporter
BF39_RS04625	PF00005	ABC transporter
BF39_RS04625	PF00664	ABC transporter transmembrane region
BF39_RS04640	PF02016	LD-carboxypeptidase N-terminal domain
BF39_RS04640	PF17676	LD-carboxypeptidase C-terminal domain
BF39_RS04645	PF07943	Penicillin-binding protein 5, C-terminal domain
BF39_RS04645	PF00768	D-alanyl-D-alanine carboxypeptidase
BF39_RS04660	PF01476	LysM domain
BF39_RS04660	PF00877	NlpC/P60 family
BF39_RS04670	PF00005	ABC transporter
BF39_RS04670	PF00664	ABC transporter transmembrane region
BF39_RS04675	PF00005	ABC transporter
BF39_RS04675	PF00664	ABC transporter transmembrane region
BF39_RS04680	PF00072	Response regulator receiver domain
BF39_RS04680	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS04685	PF00989	PAS fold
BF39_RS04685	PF16736	Single Cache-like 
BF39_RS04685	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS04685	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS04695	PF00106	short chain dehydrogenase
BF39_RS04705	PF04439	Streptomycin adenylyltransferase
BF39_RS04710	PF01522	Polysaccharide deacetylase
BF39_RS04730	PF00742	Homoserine dehydrogenase
BF39_RS04730	PF01842	ACT domain
BF39_RS04730	PF03447	Homoserine dehydrogenase, NAD binding domain
BF39_RS04735	PF00291	Pyridoxal-phosphate dependent enzyme
BF39_RS04740	PF00288	GHMP kinases N terminal domain
BF39_RS04740	PF08544	GHMP kinases C terminal 
BF39_RS04755	PF03816	Cell envelope-related transcriptional attenuator domain
BF39_RS04765	PF00072	Response regulator receiver domain
BF39_RS04765	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS04770	PF16736	Single Cache-like 
BF39_RS04770	PF00989	PAS fold
BF39_RS04770	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS04770	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS04775	PF01522	Polysaccharide deacetylase
BF39_RS04785	PF02308	MgtC family
BF39_RS04790	PF00583	Acetyltransferase (GNAT) family
BF39_RS04795	PF04183	IucA / IucC family
BF39_RS04795	PF06276	Ferric iron reductase FhuF-like transporter
BF39_RS04800	PF04183	IucA / IucC family
BF39_RS04800	PF06276	Ferric iron reductase FhuF-like transporter
BF39_RS04805	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS04805	PF00501	AMP-binding enzyme
BF39_RS04820	PF01261	Xylose isomerase-like TIM barrel
BF39_RS04825	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF39_RS04835	PF01810	LysE type translocator
BF39_RS04845	PF01734	Patatin-like phospholipase
BF39_RS04870	PF13344	Haloacid dehalogenase-like hydrolase
BF39_RS04870	PF00293	NUDIX domain
BF39_RS04875	PF02540	NAD synthase
BF39_RS04885	PF18277	AbrB C-terminal domain
BF39_RS04885	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BF39_RS04890	PF00082	Subtilase family
BF39_RS04895	PF01022	Bacterial regulatory protein, arsR family
BF39_RS04900	PF00248	Aldo/keto reductase family
BF39_RS04905	PF07690	Major Facilitator Superfamily
BF39_RS04925	PF03193	RsgA GTPase
BF39_RS04930	PF02743	Cache domain
BF39_RS04930	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS04930	PF00672	HAMP domain
BF39_RS04955	PF00210	Ferritin-like domain
BF39_RS04970	PF00296	Luciferase-like monooxygenase
BF39_RS04980	PF01593	Flavin containing amine oxidoreductase
BF39_RS04990	PF00248	Aldo/keto reductase family
BF39_RS04995	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BF39_RS04995	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BF39_RS05000	PF00583	Acetyltransferase (GNAT) family
BF39_RS05065	PF01297	Zinc-uptake complex component A periplasmic
BF39_RS05065	PF09223	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
BF39_RS05075	PF13460	NAD(P)H-binding 
BF39_RS05080	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BF39_RS05085	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
BF39_RS05085	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BF39_RS05095	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS05100	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS05110	PF00300	Histidine phosphatase superfamily (branch 1)
BF39_RS05120	PF08757	CotH kinase protein
BF39_RS05125	PF00293	NUDIX domain
BF39_RS05130	PF09335	SNARE associated Golgi protein
BF39_RS05135	PF14667	Polysaccharide biosynthesis C-terminal domain
BF39_RS05135	PF01943	Polysaccharide biosynthesis protein
BF39_RS05145	PF03773	Predicted permease
BF39_RS05150	PF09323	Domain of unknown function (DUF1980)
BF39_RS05155	PF03061	Thioesterase superfamily
BF39_RS05160	PF13396	Phospholipase_D-nuclease N-terminal
BF39_RS05160	PF13091	PLD-like domain
BF39_RS05175	PF13460	NAD(P)H-binding 
BF39_RS05180	PF04306	Protein of unknown function (DUF456)
BF39_RS05185	PF00571	CBS domain
BF39_RS05185	PF01595	Cyclin M transmembrane N-terminal domain
BF39_RS05185	PF03471	Transporter associated domain
BF39_RS05200	PF05525	Branched-chain amino acid transport protein
BF39_RS05205	PF01588	Putative tRNA binding domain
BF39_RS05225	PF07454	Stage II sporulation protein P (SpoIIP)
BF39_RS05235	PF02557	D-alanyl-D-alanine carboxypeptidase
BF39_RS05245	PF01425	Amidase
BF39_RS05250	PF07690	Major Facilitator Superfamily
BF39_RS05260	PF01145	SPFH domain / Band 7 family
BF39_RS05265	PF00300	Histidine phosphatase superfamily (branch 1)
BF39_RS05280	PF01168	Alanine racemase, N-terminal domain
BF39_RS05280	PF00842	Alanine racemase, C-terminal domain
BF39_RS05285	PF13847	Methyltransferase domain
BF39_RS05300	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
BF39_RS05305	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS05305	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF39_RS05310	PF00155	Aminotransferase class I and II
BF39_RS05310	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS05335	PF00583	Acetyltransferase (GNAT) family
BF39_RS05385	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
BF39_RS05410	PF01209	ubiE/COQ5 methyltransferase family
BF39_RS05415	PF01268	Formate--tetrahydrofolate ligase
BF39_RS05425	PF00271	Helicase conserved C-terminal domain
BF39_RS05425	PF00270	DEAD/DEAH box helicase
BF39_RS05430	PF01261	Xylose isomerase-like TIM barrel
BF39_RS05435	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS05445	PF00107	Zinc-binding dehydrogenase
BF39_RS05445	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS05450	PF04542	Sigma-70 region 2 
BF39_RS05450	PF08281	Sigma-70, region 4
BF39_RS05475	PF00255	Glutathione peroxidase
BF39_RS05480	PF11992	Domain of unknown function (DUF3488)
BF39_RS05480	PF13559	Domain of unknown function (DUF4129)
BF39_RS05480	PF01841	Transglutaminase-like superfamily
BF39_RS05485	PF01882	Protein of unknown function DUF58
BF39_RS05490	PF17863	AAA lid domain
BF39_RS05490	PF07726	ATPase family associated with various cellular activities (AAA)
BF39_RS05505	PF01568	Molydopterin dinucleotide binding domain
BF39_RS05505	PF14710	Respiratory nitrate reductase alpha N-terminal
BF39_RS05505	PF00384	Molybdopterin oxidoreductase
BF39_RS05510	PF14711	Respiratory nitrate reductase beta C-terminal
BF39_RS05510	PF13247	4Fe-4S dicluster domain
BF39_RS05515	PF02613	Nitrate reductase delta subunit
BF39_RS05520	PF02665	Nitrate reductase gamma subunit
BF39_RS05525	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS05525	PF00155	Aminotransferase class I and II
BF39_RS05530	PF00005	ABC transporter
BF39_RS05540	PF00325	Bacterial regulatory proteins, crp family
BF39_RS05540	PF00027	Cyclic nucleotide-binding domain
BF39_RS05545	PF06463	Molybdenum Cofactor Synthesis C
BF39_RS05545	PF04055	Radical SAM superfamily
BF39_RS05550	PF00899	ThiF family
BF39_RS05555	PF00994	Probable molybdopterin binding domain
BF39_RS05555	PF03453	MoeA N-terminal region (domain I and II)
BF39_RS05555	PF03454	MoeA C-terminal region (domain IV)
BF39_RS05560	PF02391	MoaE protein
BF39_RS05570	PF07690	Major Facilitator Superfamily
BF39_RS05590	PF01903	CbiX
BF39_RS05595	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BF39_RS05600	PF00355	Rieske [2Fe-2S] domain
BF39_RS05605	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS05605	PF18267	Rubredoxin NAD+ reductase C-terminal domain
BF39_RS05605	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BF39_RS05605	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BF39_RS05605	PF04324	BFD-like [2Fe-2S] binding domain
BF39_RS05610	PF01814	Hemerythrin HHE cation binding domain
BF39_RS05610	PF04405	Domain of Unknown function (DUF542)  
BF39_RS05645	PF04232	Stage V sporulation protein S (SpoVS)
BF39_RS05660	PF01510	N-acetylmuramoyl-L-alanine amidase
BF39_RS05675	PF01966	HD domain
BF39_RS05680	PF00005	ABC transporter
BF39_RS05680	PF12848	ABC transporter
BF39_RS05680	PF16326	ABC transporter C-terminal domain
BF39_RS05695	PF00436	Single-strand binding protein family
BF39_RS05700	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS05705	PF01494	FAD binding domain
BF39_RS05710	PF01494	FAD binding domain
BF39_RS05715	PF13769	Virulence factor
BF39_RS05715	PF08712	Scaffold protein Nfu/NifU N terminal
BF39_RS05725	PF06491	Disulphide isomerase
BF39_RS05730	PF04445	Putative SAM-dependent methyltransferase
BF39_RS05735	PF00750	tRNA synthetases class I (R)
BF39_RS05735	PF05746	DALR anticodon binding domain
BF39_RS05735	PF03485	Arginyl tRNA synthetase N terminal domain
BF39_RS05760	PF00133	tRNA synthetases class I (I, L, M and V)
BF39_RS05760	PF08264	Anticodon-binding domain of tRNA
BF39_RS05775	PF02875	Mur ligase family, glutamate ligase domain
BF39_RS05775	PF01225	Mur ligase family, catalytic domain
BF39_RS05775	PF08245	Mur ligase middle domain
BF39_RS05780	PF01336	OB-fold nucleic acid binding domain
BF39_RS05780	PF00152	tRNA synthetases class II (D, K and N) 
BF39_RS05800	PF12538	DNA transporter 
BF39_RS05800	PF01580	FtsK/SpoIIIE family
BF39_RS05895	PF02595	Glycerate kinase family
BF39_RS05900	PF00939	Sodium:sulfate symporter transmembrane region
BF39_RS05905	PF00072	Response regulator receiver domain
BF39_RS05905	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS05910	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS05910	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS05910	PF00672	HAMP domain
BF39_RS05925	PF00209	Sodium:neurotransmitter symporter family
BF39_RS05940	PF10997	Alternate to MurJ
BF39_RS05955	PF00465	Iron-containing alcohol dehydrogenase 
BF39_RS05960	PF01177	Asp/Glu/Hydantoin racemase
BF39_RS05965	PF01980	tRNA-methyltransferase O
BF39_RS05970	PF00583	Acetyltransferase (GNAT) family
BF39_RS05985	PF00005	ABC transporter
BF39_RS05990	PF05975	Bacterial ABC transporter protein EcsB
BF39_RS05995	PF14005	YpjP-like protein
BF39_RS06000	PF13419	Haloacid dehalogenase-like hydrolase
BF39_RS06020	PF07930	D-aminopeptidase, domain B
BF39_RS06020	PF00144	Beta-lactamase
BF39_RS06025	PF00303	Thymidylate synthase
BF39_RS06030	PF00186	Dihydrofolate reductase
BF39_RS06035	PF05223	NTF2-like N-terminal transpeptidase domain
BF39_RS06035	PF03717	Penicillin-binding Protein dimerisation domain
BF39_RS06035	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS06040	PF02525	Flavodoxin-like fold
BF39_RS06045	PF01553	Acyltransferase
BF39_RS06050	PF03006	Haemolysin-III related
BF39_RS06055	PF02416	mttA/Hcf106 family
BF39_RS06060	PF00902	Sec-independent protein translocase protein (TatC)
BF39_RS06070	PF02645	Uncharacterised protein, DegV family COG1307
BF39_RS06080	PF02630	SCO1/SenC
BF39_RS06085	PF00011	Hsp20/alpha crystallin family
BF39_RS06090	PF13537	Glutamine amidotransferase domain
BF39_RS06090	PF00733	Asparagine synthase
BF39_RS06110	PF01497	Periplasmic binding protein
BF39_RS06115	PF01063	Amino-transferase class IV
BF39_RS06120	PF00881	Nitroreductase family
BF39_RS06145	PF00011	Hsp20/alpha crystallin family
BF39_RS06150	PF00924	Mechanosensitive ion channel
BF39_RS06155	PF07730	Histidine kinase
BF39_RS06155	PF13185	GAF domain
BF39_RS06160	PF00196	Bacterial regulatory proteins, luxR family
BF39_RS06160	PF00072	Response regulator receiver domain
BF39_RS06170	PF01418	Helix-turn-helix domain, rpiR family
BF39_RS06170	PF01380	SIS domain
BF39_RS06175	PF00107	Zinc-binding dehydrogenase
BF39_RS06175	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS06205	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BF39_RS06205	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BF39_RS06210	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BF39_RS06210	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BF39_RS06225	PF03358	NADPH-dependent FMN reductase
BF39_RS06240	PF00571	CBS domain
BF39_RS06240	PF00005	ABC transporter
BF39_RS06245	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS06250	PF13520	Amino acid permease
BF39_RS06280	PF00571	CBS domain
BF39_RS06280	PF03471	Transporter associated domain
BF39_RS06280	PF01595	Cyclin M transmembrane N-terminal domain
BF39_RS06285	PF00171	Aldehyde dehydrogenase family
BF39_RS06290	PF07997	Protein of unknown function (DUF1694)
BF39_RS06295	PF09385	Histidine kinase N terminal
BF39_RS06305	PF00202	Aminotransferase class-III
BF39_RS06310	PF01144	Coenzyme A transferase
BF39_RS06315	PF01144	Coenzyme A transferase
BF39_RS06320	PF07687	Peptidase dimerisation domain
BF39_RS06320	PF01546	Peptidase family M20/M25/M40
BF39_RS06325	PF00583	Acetyltransferase (GNAT) family
BF39_RS06330	PF02954	Bacterial regulatory protein, Fis family
BF39_RS06330	PF13426	PAS domain
BF39_RS06330	PF00158	Sigma-54 interaction domain
BF39_RS06335	PF12544	Lysine-2,3-aminomutase 
BF39_RS06340	PF14122	YokU-like protein, putative antitoxin
BF39_RS06345	PF06855	YozE SAM-like fold
BF39_RS06360	PF14162	YozD-like protein
BF39_RS06375	PF07070	SpoOM protein
BF39_RS06380	PF01569	PAP2 superfamily
BF39_RS06385	PF01545	Cation efflux family
BF39_RS06385	PF16916	Dimerisation domain of Zinc Transporter
BF39_RS06390	PF00085	Thioredoxin
BF39_RS06405	PF04740	LXG domain of WXG superfamily
BF39_RS06405	PF14436	Bacterial EndoU nuclease
BF39_RS06410	PF00395	S-layer homology domain
BF39_RS06410	PF00150	Cellulase (glycosyl hydrolase family 5)
BF39_RS06410	PF03424	Carbohydrate binding domain (family 17/28)
BF39_RS06420	PF04471	Restriction endonuclease
BF39_RS06530	PF10676	Spore germination protein gerPA/gerPF
BF39_RS06555	PF07690	Major Facilitator Superfamily
BF39_RS06560	PF01521	Iron-sulphur cluster biosynthesis
BF39_RS06565	PF00285	Citrate synthase, C-terminal domain
BF39_RS06570	PF03972	MmgE/PrpD family
BF39_RS06580	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BF39_RS06580	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF39_RS06580	PF02770	Acyl-CoA dehydrogenase, middle domain
BF39_RS06585	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BF39_RS06585	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BF39_RS06590	PF00171	Aldehyde dehydrogenase family
BF39_RS06595	PF01810	LysE type translocator
BF39_RS06600	PF00378	Enoyl-CoA hydratase/isomerase
BF39_RS06610	PF10763	Protein of unknown function (DUF2584)
BF39_RS06615	PF12320	Type 5 capsule protein repressor C-terminal domain
BF39_RS06615	PF00149	Calcineurin-like phosphoesterase
BF39_RS06620	PF13476	AAA domain
BF39_RS06635	PF01022	Bacterial regulatory protein, arsR family
BF39_RS06650	PF07690	Major Facilitator Superfamily
BF39_RS06655	PF00106	short chain dehydrogenase
BF39_RS06660	PF00425	chorismate binding enzyme
BF39_RS06665	PF00501	AMP-binding enzyme
BF39_RS06665	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS06670	PF00550	Phosphopantetheine attachment site
BF39_RS06670	PF00857	Isochorismatase family
BF39_RS06675	PF00668	Condensation domain
BF39_RS06675	PF00975	Thioesterase domain
BF39_RS06675	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS06675	PF00501	AMP-binding enzyme
BF39_RS06675	PF00550	Phosphopantetheine attachment site
BF39_RS06680	PF03621	MbtH-like protein
BF39_RS06685	PF07690	Major Facilitator Superfamily
BF39_RS06700	PF00216	Bacterial DNA-binding protein
BF39_RS06710	PF05163	DinB family
BF39_RS06715	PF00082	Subtilase family
BF39_RS06720	PF01235	Sodium:alanine symporter family
BF39_RS06740	PF16291	Domain of unknown function (DUF4937
BF39_RS06745	PF01479	S4 domain
BF39_RS06745	PF00849	RNA pseudouridylate synthase
BF39_RS06750	PF03129	Anticodon binding domain
BF39_RS06750	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF39_RS06750	PF02824	TGS domain
BF39_RS06750	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BF39_RS06765	PF12146	Serine aminopeptidase, S33
BF39_RS06770	PF07690	Major Facilitator Superfamily
BF39_RS06790	PF13649	Methyltransferase domain
BF39_RS06835	PF00753	Metallo-beta-lactamase superfamily
BF39_RS06835	PF16123	Hydroxyacylglutathione hydrolase C-terminus
BF39_RS06845	PF03176	MMPL family
BF39_RS06855	PF00302	Chloramphenicol acetyltransferase
BF39_RS06870	PF00583	Acetyltransferase (GNAT) family
BF39_RS06900	PF01593	Flavin containing amine oxidoreductase
BF39_RS06910	PF13302	Acetyltransferase (GNAT) domain
BF39_RS06920	PF00313	'Cold-shock' DNA-binding domain
BF39_RS06985	PF03466	LysR substrate binding domain
BF39_RS06985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS06990	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BF39_RS06990	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BF39_RS07005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS07005	PF03466	LysR substrate binding domain
BF39_RS07010	PF03473	MOSC domain
BF39_RS07010	PF03475	3-alpha domain
BF39_RS07025	PF00005	ABC transporter
BF39_RS07025	PF00664	ABC transporter transmembrane region
BF39_RS07030	PF00664	ABC transporter transmembrane region
BF39_RS07030	PF00005	ABC transporter
BF39_RS07045	PF01810	LysE type translocator
BF39_RS07050	PF07883	Cupin domain
BF39_RS07050	PF01381	Helix-turn-helix
BF39_RS07075	PF00890	FAD binding domain
BF39_RS07080	PF12680	SnoaL-like domain
BF39_RS07080	PF08281	Sigma-70, region 4
BF39_RS07080	PF04542	Sigma-70 region 2 
BF39_RS07105	PF02638	Glycosyl hydrolase-like 10
BF39_RS07115	PF02378	Phosphotransferase system, EIIC 
BF39_RS07125	PF03702	Anhydro-N-acetylmuramic acid kinase
BF39_RS07130	PF01869	BadF/BadG/BcrA/BcrD ATPase family
BF39_RS07135	PF02660	Glycerol-3-phosphate acyltransferase
BF39_RS07140	PF00266	Aminotransferase class-V
BF39_RS07145	PF00291	Pyridoxal-phosphate dependent enzyme
BF39_RS07160	PF16123	Hydroxyacylglutathione hydrolase C-terminus
BF39_RS07160	PF00753	Metallo-beta-lactamase superfamily
BF39_RS07175	PF00271	Helicase conserved C-terminal domain
BF39_RS07175	PF00270	DEAD/DEAH box helicase
BF39_RS07190	PF17932	Tetracyclin repressor-like, C-terminal domain
BF39_RS07190	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS07205	PF02687	FtsX-like permease family
BF39_RS07205	PF12704	MacB-like periplasmic core domain
BF39_RS07205	PF00005	ABC transporter
BF39_RS07210	PF09313	Domain of unknown function (DUF1971)
BF39_RS07210	PF03848	Tellurite resistance protein TehB
BF39_RS07220	PF08241	Methyltransferase domain
BF39_RS07225	PF00205	Thiamine pyrophosphate enzyme, central domain
BF39_RS07225	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF39_RS07225	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF39_RS07230	PF12802	MarR family
BF39_RS07235	PF00300	Histidine phosphatase superfamily (branch 1)
BF39_RS07240	PF14171	Toxin SpoIISA, type II toxin-antitoxin system
BF39_RS07270	PF07687	Peptidase dimerisation domain
BF39_RS07270	PF01546	Peptidase family M20/M25/M40
BF39_RS07285	PF04542	Sigma-70 region 2 
BF39_RS07285	PF08281	Sigma-70, region 4
BF39_RS07295	PF03717	Penicillin-binding Protein dimerisation domain
BF39_RS07295	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS07310	PF01569	PAP2 superfamily
BF39_RS07315	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS07320	PF07690	Major Facilitator Superfamily
BF39_RS07325	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BF39_RS07325	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BF39_RS07330	PF00294	pfkB family carbohydrate kinase
BF39_RS07335	PF00171	Aldehyde dehydrogenase family
BF39_RS07340	PF00205	Thiamine pyrophosphate enzyme, central domain
BF39_RS07340	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF39_RS07340	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF39_RS07345	PF01261	Xylose isomerase-like TIM barrel
BF39_RS07350	PF01116	Fructose-bisphosphate aldolase class-II
BF39_RS07355	PF04962	KduI/IolB family
BF39_RS07385	PF18801	response regulator aspartate phosphatase H, N terminal
BF39_RS07390	PF01381	Helix-turn-helix
BF39_RS07405	PF02557	D-alanyl-D-alanine carboxypeptidase
BF39_RS07415	PF01520	N-acetylmuramoyl-L-alanine amidase
BF39_RS07415	PF00395	S-layer homology domain
BF39_RS07425	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS07430	PF16326	ABC transporter C-terminal domain
BF39_RS07430	PF00005	ABC transporter
BF39_RS07440	PF00563	EAL domain
BF39_RS07440	PF00990	Diguanylate cyclase, GGDEF domain
BF39_RS07440	PF03707	Bacterial signalling protein N terminal repeat
BF39_RS07445	PF13302	Acetyltransferase (GNAT) domain
BF39_RS07455	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS07460	PF00581	Rhodanese-like domain
BF39_RS07475	PF00005	ABC transporter
BF39_RS07485	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS07485	PF08359	YsiA-like protein, C-terminal region
BF39_RS07500	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF39_RS07500	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BF39_RS07500	PF02770	Acyl-CoA dehydrogenase, middle domain
BF39_RS07505	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BF39_RS07505	PF02785	Biotin carboxylase C-terminal domain
BF39_RS07505	PF00289	Biotin carboxylase, N-terminal domain
BF39_RS07510	PF00364	Biotin-requiring enzyme
BF39_RS07515	PF00682	HMGL-like
BF39_RS07520	PF00378	Enoyl-CoA hydratase/isomerase
BF39_RS07525	PF01039	Carboxyl transferase domain
BF39_RS07530	PF00501	AMP-binding enzyme
BF39_RS07530	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS07530	PF16177	Acetyl-coenzyme A synthetase N-terminus
BF39_RS07540	PF00583	Acetyltransferase (GNAT) family
BF39_RS07545	PF00485	Phosphoribulokinase / Uridine kinase family
BF39_RS07555	PF05163	DinB family
BF39_RS07560	PF00768	D-alanyl-D-alanine carboxypeptidase
BF39_RS07560	PF07943	Penicillin-binding protein 5, C-terminal domain
BF39_RS07565	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS07565	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS07570	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS07570	PF00072	Response regulator receiver domain
BF39_RS07575	PF01966	HD domain
BF39_RS07580	PF13021	Domain of unknown function (DUF3885)
BF39_RS07585	PF01048	Phosphorylase superfamily
BF39_RS07625	PF17760	UvrA interaction domain
BF39_RS07625	PF17760	UvrA interaction domain
BF39_RS07625	PF17755	UvrA DNA-binding domain
BF39_RS07625	PF17755	UvrA DNA-binding domain
BF39_RS07640	PF00144	Beta-lactamase
BF39_RS07645	PF09278	MerR, DNA binding
BF39_RS07645	PF00376	MerR family regulatory protein
BF39_RS07650	PF07690	Major Facilitator Superfamily
BF39_RS07670	PF01636	Phosphotransferase enzyme family
BF39_RS07675	PF12833	Helix-turn-helix domain
BF39_RS07690	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS07690	PF00155	Aminotransferase class I and II
BF39_RS07705	PF00107	Zinc-binding dehydrogenase
BF39_RS07705	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS07720	PF08245	Mur ligase middle domain
BF39_RS07720	PF01225	Mur ligase family, catalytic domain
BF39_RS07720	PF02875	Mur ligase family, glutamate ligase domain
BF39_RS07725	PF01225	Mur ligase family, catalytic domain
BF39_RS07725	PF02875	Mur ligase family, glutamate ligase domain
BF39_RS07725	PF08245	Mur ligase middle domain
BF39_RS07740	PF07486	Cell Wall Hydrolase
BF39_RS07750	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS07750	PF00072	Response regulator receiver domain
BF39_RS07765	PF12848	ABC transporter
BF39_RS07765	PF00005	ABC transporter
BF39_RS07780	PF00005	ABC transporter
BF39_RS07805	PF00742	Homoserine dehydrogenase
BF39_RS07805	PF03447	Homoserine dehydrogenase, NAD binding domain
BF39_RS07805	PF01842	ACT domain
BF39_RS07810	PF00155	Aminotransferase class I and II
BF39_RS07810	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS07815	PF01820	D-ala D-ala ligase N-terminus
BF39_RS07815	PF07478	D-ala D-ala ligase C-terminus
BF39_RS07820	PF03070	TENA/THI-4/PQQC family
BF39_RS07895	PF00067	Cytochrome P450
BF39_RS07905	PF00132	Bacterial transferase hexapeptide (six repeats)
BF39_RS07910	PF07561	Domain of Unknown Function (DUF1540)
BF39_RS07920	PF00067	Cytochrome P450
BF39_RS07940	PF13188	PAS domain
BF39_RS07940	PF00989	PAS fold
BF39_RS07940	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS07940	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS07940	PF13426	PAS domain
BF39_RS07945	PF03717	Penicillin-binding Protein dimerisation domain
BF39_RS07945	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS07950	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
BF39_RS07955	PF01177	Asp/Glu/Hydantoin racemase
BF39_RS07960	PF07155	ECF-type riboflavin transporter, S component
BF39_RS07965	PF00005	ABC transporter
BF39_RS07965	PF12558	ATP-binding cassette cobalt transporter
BF39_RS07975	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS07975	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS07985	PF04229	GrpB protein
BF39_RS07990	PF00107	Zinc-binding dehydrogenase
BF39_RS07990	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS07995	PF03717	Penicillin-binding Protein dimerisation domain
BF39_RS07995	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS07995	PF03793	PASTA domain
BF39_RS08040	PF01965	DJ-1/PfpI family
BF39_RS08055	PF00144	Beta-lactamase
BF39_RS08060	PF01609	Transposase DDE domain
BF39_RS08070	PF07690	Major Facilitator Superfamily
BF39_RS08105	PF00892	EamA-like transporter family
BF39_RS08110	PF01270	Glycosyl hydrolases family 8
BF39_RS08120	PF00293	NUDIX domain
BF39_RS08130	PF00144	Beta-lactamase
BF39_RS08140	PF07690	Major Facilitator Superfamily
BF39_RS08155	PF09297	NADH pyrophosphatase zinc ribbon domain
BF39_RS08155	PF00293	NUDIX domain
BF39_RS08160	PF02767	DNA polymerase III beta subunit, central domain
BF39_RS08160	PF02768	DNA polymerase III beta subunit, C-terminal domain
BF39_RS08160	PF00712	DNA polymerase III beta subunit, N-terminal domain
BF39_RS08165	PF00293	NUDIX domain
BF39_RS08180	PF12706	Beta-lactamase superfamily domain
BF39_RS08200	PF09234	Domain of unknown function (DUF1963)
BF39_RS08230	PF01734	Patatin-like phospholipase
BF39_RS08235	PF08000	Bacterial PH domain
BF39_RS08245	PF12867	DinB superfamily
BF39_RS08260	PF02673	Bacitracin resistance protein BacA
BF39_RS08270	PF01541	GIY-YIG catalytic domain
BF39_RS08310	PF01266	FAD dependent oxidoreductase
BF39_RS08335	PF13419	Haloacid dehalogenase-like hydrolase
BF39_RS08355	PF00282	Pyridoxal-dependent decarboxylase conserved domain
BF39_RS08360	PF00501	AMP-binding enzyme
BF39_RS08360	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS08360	PF00668	Condensation domain
BF39_RS08360	PF00550	Phosphopantetheine attachment site
BF39_RS08370	PF00128	Alpha amylase, catalytic domain
BF39_RS08370	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BF39_RS08370	PF03714	Bacterial pullanase-associated domain
BF39_RS08375	PF03413	Peptidase propeptide and YPEB domain
BF39_RS08375	PF01447	Thermolysin metallopeptidase, catalytic domain
BF39_RS08375	PF07504	Fungalysin/Thermolysin Propeptide Motif
BF39_RS08375	PF02868	Thermolysin metallopeptidase, alpha-helical domain
BF39_RS08395	PF00344	SecY translocase
BF39_RS08400	PF11638	DnaA N-terminal domain
BF39_RS08400	PF08299	Bacterial dnaA protein helix-turn-helix
BF39_RS08400	PF00308	Bacterial dnaA  protein
BF39_RS08405	PF00892	EamA-like transporter family
BF39_RS08410	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS08410	PF00155	Aminotransferase class I and II
BF39_RS08415	PF00561	alpha/beta hydrolase fold
BF39_RS08440	PF06081	Aromatic acid exporter family member 1
BF39_RS08455	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
BF39_RS08460	PF14620	YpeB sporulation
BF39_RS08460	PF03413	Peptidase propeptide and YPEB domain
BF39_RS08465	PF01471	Putative peptidoglycan binding domain
BF39_RS08465	PF07486	Cell Wall Hydrolase
BF39_RS08480	PF03301	Tryptophan 2,3-dioxygenase
BF39_RS08485	PF04199	Putative cyclase
BF39_RS08490	PF00266	Aminotransferase class-V
BF39_RS08495	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS08495	PF08359	YsiA-like protein, C-terminal region
BF39_RS08500	PF00293	NUDIX domain
BF39_RS08500	PF13344	Haloacid dehalogenase-like hydrolase
BF39_RS08525	PF02954	Bacterial regulatory protein, Fis family
BF39_RS08525	PF00158	Sigma-54 interaction domain
BF39_RS08525	PF01590	GAF domain
BF39_RS08545	PF08220	DeoR-like helix-turn-helix domain
BF39_RS08545	PF00455	DeoR C terminal sensor domain
BF39_RS08560	PF00403	Heavy-metal-associated domain
BF39_RS08560	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS08560	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF39_RS08565	PF02082	Transcriptional regulator
BF39_RS08580	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS08580	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF39_RS08585	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BF39_RS08585	PF00364	Biotin-requiring enzyme
BF39_RS08585	PF02817	e3 binding domain
BF39_RS08590	PF02779	Transketolase, pyrimidine binding domain
BF39_RS08590	PF02780	Transketolase, C-terminal domain
BF39_RS08595	PF00676	Dehydrogenase E1 component
BF39_RS08605	PF00106	short chain dehydrogenase
BF39_RS08610	PF04229	GrpB protein
BF39_RS08610	PF13673	Acetyltransferase (GNAT) domain
BF39_RS08645	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS08650	PF00571	CBS domain
BF39_RS08650	PF00005	ABC transporter
BF39_RS08655	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
BF39_RS08660	PF00574	Clp protease
BF39_RS08675	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
BF39_RS08680	PF13673	Acetyltransferase (GNAT) domain
BF39_RS08685	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
BF39_RS08685	PF18416	N-acetylglucosamine binding protein domain 2
BF39_RS08700	PF10990	Protein of unknown function (DUF2809)
BF39_RS08730	PF00753	Metallo-beta-lactamase superfamily
BF39_RS08730	PF13567	Domain of unknown function (DUF4131)
BF39_RS08730	PF03772	Competence protein
BF39_RS08780	PF13538	UvrD-like helicase C-terminal domain
BF39_RS08795	PF06094	Gamma-glutamyl cyclotransferase, AIG2-like
BF39_RS08800	PF16124	RecQ zinc-binding
BF39_RS08800	PF00270	DEAD/DEAH box helicase
BF39_RS08800	PF09382	RQC domain
BF39_RS08800	PF00271	Helicase conserved C-terminal domain
BF39_RS08800	PF00570	HRDC domain
BF39_RS08850	PF01368	DHH family
BF39_RS08850	PF02833	DHHA2 domain
BF39_RS08855	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
BF39_RS08855	PF18416	N-acetylglucosamine binding protein domain 2
BF39_RS08865	PF02627	Carboxymuconolactone decarboxylase family
BF39_RS08870	PF01235	Sodium:alanine symporter family
BF39_RS08875	PF00171	Aldehyde dehydrogenase family
BF39_RS08880	PF00701	Dihydrodipicolinate synthetase family
BF39_RS08885	PF05544	Proline racemase
BF39_RS08890	PF05544	Proline racemase
BF39_RS08895	PF01266	FAD dependent oxidoreductase
BF39_RS08900	PF02954	Bacterial regulatory protein, Fis family
BF39_RS08900	PF13188	PAS domain
BF39_RS08900	PF00158	Sigma-54 interaction domain
BF39_RS08915	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS08915	PF04324	BFD-like [2Fe-2S] binding domain
BF39_RS08930	PF08876	Domain of unknown function (DUF1836)
BF39_RS08935	PF09335	SNARE associated Golgi protein
BF39_RS08950	PF04914	DltD protein
BF39_RS08955	PF00958	GMP synthase C terminal domain
BF39_RS08955	PF00117	Glutamine amidotransferase class-I
BF39_RS08955	PF13673	Acetyltransferase (GNAT) domain
BF39_RS08955	PF13302	Acetyltransferase (GNAT) domain
BF39_RS08955	PF03352	Methyladenine glycosylase
BF39_RS08960	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS08965	PF00877	NlpC/P60 family
BF39_RS08965	PF18348	Bacterial dipeptidyl-peptidase Sh3 domain
BF39_RS08970	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BF39_RS08970	PF13378	Enolase C-terminal domain-like
BF39_RS09010	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
BF39_RS09010	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BF39_RS09015	PF16736	Single Cache-like 
BF39_RS09015	PF00989	PAS fold
BF39_RS09015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS09015	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS09020	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS09020	PF00072	Response regulator receiver domain
BF39_RS09040	PF01048	Phosphorylase superfamily
BF39_RS09050	PF03808	Glycosyl transferase WecB/TagA/CpsF family
BF39_RS09060	PF02645	Uncharacterised protein, DegV family COG1307
BF39_RS09080	PF07690	Major Facilitator Superfamily
BF39_RS09090	PF04519	Polymer-forming cytoskeletal
BF39_RS09095	PF13171	Protein of unknown function (DUF4004)
BF39_RS09100	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS09100	PF12793	Sugar transport-related sRNA regulator N-term
BF39_RS09105	PF07690	Major Facilitator Superfamily
BF39_RS09125	PF04226	Transglycosylase associated protein
BF39_RS09130	PF01156	Inosine-uridine preferring nucleoside hydrolase
BF39_RS09140	PF08241	Methyltransferase domain
BF39_RS09175	PF00155	Aminotransferase class I and II
BF39_RS09180	PF07977	FabA-like domain
BF39_RS09185	PF03630	Fumble 
BF39_RS09205	PF00005	ABC transporter
BF39_RS09255	PF01594	AI-2E family transporter
BF39_RS09270	PF00296	Luciferase-like monooxygenase
BF39_RS09275	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS09280	PF09084	NMT1/THI5 like
BF39_RS09285	PF00005	ABC transporter
BF39_RS09305	PF09297	NADH pyrophosphatase zinc ribbon domain
BF39_RS09305	PF00293	NUDIX domain
BF39_RS09325	PF02522	Aminoglycoside 3-N-acetyltransferase
BF39_RS09350	PF13536	Putative multidrug resistance efflux transporter
BF39_RS09355	PF12867	DinB superfamily
BF39_RS09375	PF08713	DNA alkylation repair enzyme
BF39_RS09385	PF01522	Polysaccharide deacetylase
BF39_RS09395	PF03741	Integral membrane protein TerC family
BF39_RS09400	PF00884	Sulfatase
BF39_RS09405	PF00005	ABC transporter
BF39_RS09405	PF12848	ABC transporter
BF39_RS09415	PF03176	MMPL family
BF39_RS09420	PF03176	MMPL family
BF39_RS09425	PF03176	MMPL family
BF39_RS09430	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS09430	PF16295	Tetracyclin repressor-like, C-terminal domain
BF39_RS09440	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BF39_RS09445	PF02153	Prephenate dehydrogenase
BF39_RS09445	PF01842	ACT domain
BF39_RS09450	PF00155	Aminotransferase class I and II
BF39_RS09455	PF01264	Chorismate synthase
BF39_RS09460	PF01817	Chorismate mutase type II
BF39_RS09460	PF00793	DAHP synthetase I family
BF39_RS09480	PF01636	Phosphotransferase enzyme family
BF39_RS09495	PF01476	LysM domain
BF39_RS09495	PF06725	3D domain
BF39_RS09505	PF08281	Sigma-70, region 4
BF39_RS09505	PF04542	Sigma-70 region 2 
BF39_RS09525	PF06039	Malate:quinone oxidoreductase (Mqo)
BF39_RS09530	PF13407	Periplasmic binding protein domain
BF39_RS09535	PF02653	Branched-chain amino acid transport system / permease component
BF39_RS09540	PF02653	Branched-chain amino acid transport system / permease component
BF39_RS09545	PF00005	ABC transporter
BF39_RS09550	PF04198	Putative sugar-binding domain
BF39_RS09550	PF00325	Bacterial regulatory proteins, crp family
BF39_RS09565	PF01791	DeoC/LacD family aldolase
BF39_RS09585	PF03992	Antibiotic biosynthesis monooxygenase
BF39_RS09605	PF07662	Na+ dependent nucleoside transporter C-terminus
BF39_RS09605	PF01773	Na+ dependent nucleoside transporter N-terminus
BF39_RS09610	PF00171	Aldehyde dehydrogenase family
BF39_RS09615	PF01472	PUA domain
BF39_RS09615	PF00696	Amino acid kinase family
BF39_RS09620	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BF39_RS09620	PF03807	NADP oxidoreductase coenzyme F420-dependent
BF39_RS09625	PF01546	Peptidase family M20/M25/M40
BF39_RS09630	PF01614	Bacterial transcriptional regulator
BF39_RS09630	PF09339	IclR helix-turn-helix domain
BF39_RS09635	PF00324	Amino acid permease
BF39_RS09640	PF01139	tRNA-splicing ligase RtcB
BF39_RS09645	PF00487	Fatty acid desaturase
BF39_RS09650	PF00245	Alkaline phosphatase
BF39_RS09655	PF11188	Protein of unknown function (DUF2975)
BF39_RS09660	PF13443	Cro/C1-type HTH DNA-binding domain
BF39_RS09675	PF10086	YhfC intramembrane metalloprotease
BF39_RS09685	PF00072	Response regulator receiver domain
BF39_RS09685	PF04397	LytTr DNA-binding domain
BF39_RS09695	PF13302	Acetyltransferase (GNAT) domain
BF39_RS09700	PF12681	Glyoxalase-like domain
BF39_RS09720	PF07726	ATPase family associated with various cellular activities (AAA)
BF39_RS09720	PF17863	AAA lid domain
BF39_RS09735	PF07690	Major Facilitator Superfamily
BF39_RS09745	PF00535	Glycosyl transferase family 2
BF39_RS09760	PF00535	Glycosyl transferase family 2
BF39_RS09770	PF00535	Glycosyl transferase family 2
BF39_RS09780	PF00202	Aminotransferase class-III
BF39_RS09785	PF00199	Catalase
BF39_RS09785	PF06628	Catalase-related immune-responsive
BF39_RS09795	PF01979	Amidohydrolase family
BF39_RS09795	PF13382	Adenine deaminase C-terminal domain
BF39_RS09800	PF00144	Beta-lactamase
BF39_RS09820	PF07726	ATPase family associated with various cellular activities (AAA)
BF39_RS09820	PF17863	AAA lid domain
BF39_RS09830	PF00881	Nitroreductase family
BF39_RS09835	PF01047	MarR family
BF39_RS09840	PF14492	Elongation Factor G, domain II
BF39_RS09840	PF00009	Elongation factor Tu GTP binding domain
BF39_RS09840	PF03764	Elongation factor G, domain IV
BF39_RS09840	PF00679	Elongation factor G C-terminus
BF39_RS09850	PF00293	NUDIX domain
BF39_RS09865	PF00005	ABC transporter
BF39_RS09870	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS09880	PF02687	FtsX-like permease family
BF39_RS09880	PF12704	MacB-like periplasmic core domain
BF39_RS09880	PF00005	ABC transporter
BF39_RS09905	PF12833	Helix-turn-helix domain
BF39_RS09910	PF00583	Acetyltransferase (GNAT) family
BF39_RS09925	PF00892	EamA-like transporter family
BF39_RS09930	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS09930	PF00155	Aminotransferase class I and II
BF39_RS09935	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
BF39_RS09940	PF13031	Protein of unknown function (DUF3892)
BF39_RS09950	PF00672	HAMP domain
BF39_RS09950	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS09955	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS09955	PF00072	Response regulator receiver domain
BF39_RS09960	PF00561	alpha/beta hydrolase fold
BF39_RS09990	PF01925	Sulfite exporter TauE/SafE
BF39_RS09995	PF13302	Acetyltransferase (GNAT) domain
BF39_RS10000	PF00324	Amino acid permease
BF39_RS10010	PF08713	DNA alkylation repair enzyme
BF39_RS10015	PF10898	Protein of unknown function (DUF2716)
BF39_RS10035	PF00293	NUDIX domain
BF39_RS10045	PF10502	Signal peptidase, peptidase S26 
BF39_RS10050	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS10050	PF03717	Penicillin-binding Protein dimerisation domain
BF39_RS10060	PF02146	Sir2 family
BF39_RS10065	PF01470	Pyroglutamyl peptidase
BF39_RS10085	PF03746	LamB/YcsF family
BF39_RS10095	PF02682	Carboxyltransferase domain, subdomain C and D
BF39_RS10100	PF01614	Bacterial transcriptional regulator
BF39_RS10100	PF09339	IclR helix-turn-helix domain
BF39_RS10105	PF10502	Signal peptidase, peptidase S26 
BF39_RS10110	PF03932	CutC family
BF39_RS10115	PF07454	Stage II sporulation protein P (SpoIIP)
BF39_RS10130	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
BF39_RS10130	PF02770	Acyl-CoA dehydrogenase, middle domain
BF39_RS10130	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF39_RS10150	PF07670	Nucleoside recognition
BF39_RS10165	PF02915	Rubrerythrin
BF39_RS10175	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS10180	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
BF39_RS10180	PF00391	PEP-utilising enzyme, mobile domain
BF39_RS10185	PF00753	Metallo-beta-lactamase superfamily
BF39_RS10200	PF07875	Coat F domain
BF39_RS10205	PF08892	YqcI/YcgG family
BF39_RS10210	PF01810	LysE type translocator
BF39_RS10225	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF39_RS10230	PF10710	Protein of unknown function (DUF2512)
BF39_RS10235	PF11553	Protein of unknown function (DUF3231)
BF39_RS10240	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF39_RS10245	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS10245	PF13823	Alcohol dehydrogenase GroES-associated
BF39_RS10245	PF00107	Zinc-binding dehydrogenase
BF39_RS10260	PF00206	Lyase
BF39_RS10260	PF10415	Fumarase C C-terminus
BF39_RS10265	PF17763	Glutaminase/Asparaginase C-terminal domain
BF39_RS10265	PF00710	Asparaginase, N-terminal
BF39_RS10270	PF01381	Helix-turn-helix
BF39_RS10280	PF02151	UvrB/uvrC motif
BF39_RS10280	PF12826	Helix-hairpin-helix motif
BF39_RS10280	PF08459	UvrC Helix-hairpin-helix N-terminal
BF39_RS10280	PF01541	GIY-YIG catalytic domain
BF39_RS10285	PF13520	Amino acid permease
BF39_RS10290	PF05525	Branched-chain amino acid transport protein
BF39_RS10295	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BF39_RS10295	PF03807	NADP oxidoreductase coenzyme F420-dependent
BF39_RS10300	PF13564	DoxX-like family
BF39_RS10305	PF00390	Malic enzyme, N-terminal domain
BF39_RS10305	PF03949	Malic enzyme, NAD binding domain
BF39_RS10315	PF05504	Spore germination B3/ GerAC like, C-terminal 
BF39_RS10320	PF05504	Spore germination B3/ GerAC like, C-terminal 
BF39_RS10325	PF03845	Spore germination protein
BF39_RS10330	PF03323	Bacillus/Clostridium GerA spore germination protein
BF39_RS10335	PF00072	Response regulator receiver domain
BF39_RS10335	PF08664	YcbB domain
BF39_RS10345	PF04960	Glutaminase
BF39_RS10350	PF01235	Sodium:alanine symporter family
BF39_RS10375	PF02872	5'-nucleotidase, C-terminal domain
BF39_RS10375	PF00149	Calcineurin-like phosphoesterase
BF39_RS10375	PF17936	Bacterial Ig domain
BF39_RS10380	PF00199	Catalase
BF39_RS10380	PF06628	Catalase-related immune-responsive
BF39_RS10385	PF00561	alpha/beta hydrolase fold
BF39_RS10390	PF00857	Isochorismatase family
BF39_RS10405	PF01979	Amidohydrolase family
BF39_RS10415	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS10415	PF03466	LysR substrate binding domain
BF39_RS10440	PF11181	Heat induced stress protein YflT
BF39_RS10455	PF03073	TspO/MBR family
BF39_RS10460	PF03441	FAD binding domain of DNA photolyase
BF39_RS10460	PF00875	DNA photolyase
BF39_RS10470	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
BF39_RS10475	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
BF39_RS10475	PF00361	Proton-conducting membrane transporter
BF39_RS10480	PF10057	Uncharacterized conserved protein (DUF2294)
BF39_RS10490	PF01040	UbiA prenyltransferase family
BF39_RS10495	PF00561	alpha/beta hydrolase fold
BF39_RS10500	PF01297	Zinc-uptake complex component A periplasmic
BF39_RS10505	PF00950	ABC 3 transport family
BF39_RS10510	PF00005	ABC transporter
BF39_RS10535	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BF39_RS10540	PF01758	Sodium Bile acid symporter family
BF39_RS10545	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS10550	PF01022	Bacterial regulatory protein, arsR family
BF39_RS10565	PF00012	Hsp70 protein
BF39_RS10580	PF01037	Lrp/AsnC ligand binding domain
BF39_RS10595	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS10605	PF01609	Transposase DDE domain
BF39_RS10620	PF12833	Helix-turn-helix domain
BF39_RS10620	PF02805	Metal binding domain of Ada
BF39_RS10630	PF00144	Beta-lactamase
BF39_RS10635	PF01609	Transposase DDE domain
BF39_RS10650	PF12802	MarR family
BF39_RS10655	PF00258	Flavodoxin
BF39_RS10655	PF00067	Cytochrome P450
BF39_RS10655	PF00175	Oxidoreductase NAD-binding domain 
BF39_RS10655	PF00667	FAD binding domain
BF39_RS10665	PF07690	Major Facilitator Superfamily
BF39_RS10690	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS10690	PF00072	Response regulator receiver domain
BF39_RS10695	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS10695	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS10695	PF00672	HAMP domain
BF39_RS10725	PF00291	Pyridoxal-phosphate dependent enzyme
BF39_RS10750	PF01381	Helix-turn-helix
BF39_RS10765	PF00753	Metallo-beta-lactamase superfamily
BF39_RS10770	PF01073	3-beta hydroxysteroid dehydrogenase/isomerase family
BF39_RS10780	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BF39_RS10780	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BF39_RS10785	PF04072	Leucine carboxyl methyltransferase
BF39_RS10800	PF00005	ABC transporter
BF39_RS10805	PF02687	FtsX-like permease family
BF39_RS10825	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS10825	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS10825	PF00672	HAMP domain
BF39_RS10830	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS10830	PF00072	Response regulator receiver domain
BF39_RS10840	PF01047	MarR family
BF39_RS10850	PF04299	Putative FMN-binding domain
BF39_RS10855	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF39_RS10855	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS10860	PF07690	Major Facilitator Superfamily
BF39_RS10865	PF02589	LUD domain
BF39_RS10870	PF02589	LUD domain
BF39_RS10870	PF13183	4Fe-4S dicluster domain
BF39_RS10870	PF11870	Domain of unknown function (DUF3390)
BF39_RS10875	PF02754	Cysteine-rich domain
BF39_RS10880	PF03466	LysR substrate binding domain
BF39_RS10880	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS10890	PF02016	LD-carboxypeptidase N-terminal domain
BF39_RS10890	PF17676	LD-carboxypeptidase C-terminal domain
BF39_RS10915	PF07690	Major Facilitator Superfamily
BF39_RS10920	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BF39_RS10920	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BF39_RS10925	PF05116	Sucrose-6F-phosphate phosphohydrolase
BF39_RS10935	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS10940	PF18801	response regulator aspartate phosphatase H, N terminal
BF39_RS10960	PF11798	IMS family HHH motif
BF39_RS10960	PF11799	impB/mucB/samB family C-terminal domain
BF39_RS10960	PF00817	impB/mucB/samB family
BF39_RS10990	PF01554	MatE
BF39_RS10995	PF18496	Collagenase G catalytic helper subdomain
BF39_RS10995	PF08453	Peptidase family M9 N-terminal
BF39_RS10995	PF01752	Collagenase
BF39_RS11005	PF07690	Major Facilitator Superfamily
BF39_RS11010	PF16859	Tetracyclin repressor-like, C-terminal domain
BF39_RS11010	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS11020	PF01022	Bacterial regulatory protein, arsR family
BF39_RS11030	PF03313	Serine dehydratase alpha chain
BF39_RS11035	PF03315	Serine dehydratase beta chain
BF39_RS11035	PF01842	ACT domain
BF39_RS11045	PF00202	Aminotransferase class-III
BF39_RS11050	PF00708	Acylphosphatase
BF39_RS11050	PF07503	HypF finger
BF39_RS11050	PF01300	Telomere recombination
BF39_RS11050	PF17788	HypF Kae1-like domain
BF39_RS11055	PF00586	AIR synthase related protein, N-terminal domain
BF39_RS11055	PF02769	AIR synthase related protein, C-terminal domain
BF39_RS11060	PF00857	Isochorismatase family
BF39_RS11065	PF01037	Lrp/AsnC ligand binding domain
BF39_RS11070	PF13520	Amino acid permease
BF39_RS11085	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BF39_RS11085	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BF39_RS11085	PF01842	ACT domain
BF39_RS11090	PF00266	Aminotransferase class-V
BF39_RS11105	PF04542	Sigma-70 region 2 
BF39_RS11105	PF08281	Sigma-70, region 4
BF39_RS11120	PF07883	Cupin domain
BF39_RS11130	PF12833	Helix-turn-helix domain
BF39_RS11130	PF01497	Periplasmic binding protein
BF39_RS11135	PF01804	Penicillin amidase
BF39_RS11145	PF00395	S-layer homology domain
BF39_RS11180	PF14044	NETI protein
BF39_RS11185	PF07690	Major Facilitator Superfamily
BF39_RS11190	PF12697	Alpha/beta hydrolase family
BF39_RS11195	PF01047	MarR family
BF39_RS11200	PF07690	Major Facilitator Superfamily
BF39_RS11215	PF12679	ABC-2 family transporter protein
BF39_RS11220	PF13732	Domain of unknown function (DUF4162)
BF39_RS11220	PF00005	ABC transporter
BF39_RS11225	PF13396	Phospholipase_D-nuclease N-terminal
BF39_RS11235	PF17314	Family of unknown function (DUF5360)
BF39_RS11240	PF00893	Small Multidrug Resistance protein
BF39_RS11245	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS11250	PF17440	Thiol-activated cytolysin beta sandwich domain
BF39_RS11250	PF01289	Thiol-activated cytolysin
BF39_RS11260	PF02667	Short chain fatty acid transporter
BF39_RS11270	PF02525	Flavodoxin-like fold
BF39_RS11290	PF14256	YwiC-like protein
BF39_RS11300	PF00005	ABC transporter
BF39_RS11305	PF02361	Cobalt transport protein
BF39_RS11320	PF03737	Aldolase/RraA
BF39_RS11325	PF03606	C4-dicarboxylate anaerobic carrier
BF39_RS11330	PF04231	Endonuclease I
BF39_RS11345	PF01381	Helix-turn-helix
BF39_RS11350	PF02660	Glycerol-3-phosphate acyltransferase
BF39_RS11355	PF04073	Aminoacyl-tRNA editing domain
BF39_RS11360	PF13393	Histidyl-tRNA synthetase
BF39_RS11360	PF03129	Anticodon binding domain
BF39_RS11375	PF01638	HxlR-like helix-turn-helix
BF39_RS11380	PF00881	Nitroreductase family
BF39_RS11390	PF00391	PEP-utilising enzyme, mobile domain
BF39_RS11390	PF02887	Pyruvate kinase, alpha/beta domain
BF39_RS11390	PF00224	Pyruvate kinase, barrel domain
BF39_RS11410	PF00005	ABC transporter
BF39_RS11435	PF13419	Haloacid dehalogenase-like hydrolase
BF39_RS11445	PF13350	Tyrosine phosphatase family
BF39_RS11460	PF00293	NUDIX domain
BF39_RS11460	PF13344	Haloacid dehalogenase-like hydrolase
BF39_RS11470	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS11475	PF00480	ROK family
BF39_RS11480	PF07690	Major Facilitator Superfamily
BF39_RS11485	PF12464	Maltose acetyltransferase 
BF39_RS11485	PF14602	Hexapeptide repeat of succinyl-transferase
BF39_RS11495	PF00005	ABC transporter
BF39_RS11495	PF02687	FtsX-like permease family
BF39_RS11495	PF12704	MacB-like periplasmic core domain
BF39_RS11500	PF00579	tRNA synthetases class I (W and Y)
BF39_RS11505	PF13288	DXP reductoisomerase C-terminal domain
BF39_RS11505	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
BF39_RS11505	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
BF39_RS11510	PF01594	AI-2E family transporter
BF39_RS11530	PF08241	Methyltransferase domain
BF39_RS11540	PF07690	Major Facilitator Superfamily
BF39_RS11560	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS11570	PF00571	CBS domain
BF39_RS11570	PF03471	Transporter associated domain
BF39_RS11570	PF01595	Cyclin M transmembrane N-terminal domain
BF39_RS11575	PF13411	MerR HTH family regulatory protein
BF39_RS11580	PF00892	EamA-like transporter family
BF39_RS11585	PF00805	Pentapeptide repeats (8 copies)
BF39_RS11590	PF06906	Protein of unknown function (DUF1272)
BF39_RS11595	PF10282	Lactonase, 7-bladed beta-propeller
BF39_RS11600	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BF39_RS11600	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BF39_RS11605	PF02447	GntP family permease
BF39_RS11610	PF00923	Transaldolase/Fructose-6-phosphate aldolase
BF39_RS11615	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BF39_RS11615	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BF39_RS11620	PF02780	Transketolase, C-terminal domain
BF39_RS11620	PF02779	Transketolase, pyrimidine binding domain
BF39_RS11620	PF00456	Transketolase, thiamine diphosphate binding domain
BF39_RS11625	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
BF39_RS11625	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
BF39_RS11630	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
BF39_RS11630	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
BF39_RS11635	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS11635	PF00107	Zinc-binding dehydrogenase
BF39_RS11640	PF00296	Luciferase-like monooxygenase
BF39_RS11650	PF00698	Acyl transferase domain
BF39_RS11650	PF08659	KR domain
BF39_RS11650	PF00550	Phosphopantetheine attachment site
BF39_RS11650	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS11650	PF16197	Ketoacyl-synthetase C-terminal extension
BF39_RS11650	PF00109	Beta-ketoacyl synthase, N-terminal domain
BF39_RS11650	PF14765	Polyketide synthase dehydratase
BF39_RS11650	PF02801	Beta-ketoacyl synthase, C-terminal domain
BF39_RS11660	PF00106	short chain dehydrogenase
BF39_RS11665	PF01447	Thermolysin metallopeptidase, catalytic domain
BF39_RS11665	PF07504	Fungalysin/Thermolysin Propeptide Motif
BF39_RS11665	PF03413	Peptidase propeptide and YPEB domain
BF39_RS11665	PF02868	Thermolysin metallopeptidase, alpha-helical domain
BF39_RS11685	PF00248	Aldo/keto reductase family
BF39_RS11690	PF07690	Major Facilitator Superfamily
BF39_RS11700	PF03928	Haem-degrading
BF39_RS11705	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS11735	PF03960	ArsC family
BF39_RS11745	PF01638	HxlR-like helix-turn-helix
BF39_RS11750	PF07702	UTRA domain
BF39_RS11750	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS11765	PF01638	HxlR-like helix-turn-helix
BF39_RS11770	PF01638	HxlR-like helix-turn-helix
BF39_RS11775	PF00248	Aldo/keto reductase family
BF39_RS11805	PF02567	Phenazine biosynthesis-like protein
BF39_RS11825	PF00501	AMP-binding enzyme
BF39_RS11825	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS11835	PF01638	HxlR-like helix-turn-helix
BF39_RS11855	PF01022	Bacterial regulatory protein, arsR family
BF39_RS11865	PF12791	Anti-sigma factor N-terminus
BF39_RS11870	PF04542	Sigma-70 region 2 
BF39_RS11885	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS11905	PF05656	Protein of unknown function (DUF805)
BF39_RS11910	PF01061	ABC-2 type transporter
BF39_RS11915	PF13732	Domain of unknown function (DUF4162)
BF39_RS11915	PF00005	ABC transporter
BF39_RS11930	PF03063	Prismane/CO dehydrogenase family
BF39_RS11940	PF00753	Metallo-beta-lactamase superfamily
BF39_RS11945	PF01183	Glycosyl hydrolases family 25
BF39_RS11945	PF01471	Putative peptidoglycan binding domain
BF39_RS11970	PF00144	Beta-lactamase
BF39_RS12010	PF00753	Metallo-beta-lactamase superfamily
BF39_RS12015	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS12015	PF00107	Zinc-binding dehydrogenase
BF39_RS12020	PF00324	Amino acid permease
BF39_RS12025	PF07690	Major Facilitator Superfamily
BF39_RS12055	PF02585	GlcNAc-PI de-N-acetylase
BF39_RS12060	PF08830	Protein of unknown function (DUF1806)
BF39_RS12065	PF03600	Citrate transporter
BF39_RS12085	PF01497	Periplasmic binding protein
BF39_RS12095	PF01032	FecCD transport family
BF39_RS12100	PF01032	FecCD transport family
BF39_RS12105	PF05675	Protein of unknown function (DUF817)
BF39_RS12110	PF02567	Phenazine biosynthesis-like protein
BF39_RS12115	PF13170	Protein of unknown function (DUF4003)
BF39_RS12130	PF10901	Protein of unknown function (DUF2690)
BF39_RS12140	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS12140	PF03466	LysR substrate binding domain
BF39_RS12145	PF00107	Zinc-binding dehydrogenase
BF39_RS12145	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS12160	PF00488	MutS domain V
BF39_RS12160	PF01713	Smr domain
BF39_RS12170	PF00128	Alpha amylase, catalytic domain
BF39_RS12170	PF09154	Domain of unknown function (DUF1939)
BF39_RS12175	PF00797	N-acetyltransferase
BF39_RS12180	PF01432	Peptidase family M3
BF39_RS12180	PF08439	Oligopeptidase F
BF39_RS12185	PF00144	Beta-lactamase
BF39_RS12195	PF07690	Major Facilitator Superfamily
BF39_RS12200	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS12200	PF03466	LysR substrate binding domain
BF39_RS12215	PF03009	Glycerophosphoryl diester phosphodiesterase family
BF39_RS12235	PF01494	FAD binding domain
BF39_RS12240	PF01022	Bacterial regulatory protein, arsR family
BF39_RS12245	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS12245	PF00107	Zinc-binding dehydrogenase
BF39_RS12250	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
BF39_RS12265	PF04299	Putative FMN-binding domain
BF39_RS12270	PF04229	GrpB protein
BF39_RS12280	PF01758	Sodium Bile acid symporter family
BF39_RS12285	PF01565	FAD binding domain 
BF39_RS12285	PF02913	FAD linked oxidases, C-terminal domain
BF39_RS12310	PF00132	Bacterial transferase hexapeptide (six repeats)
BF39_RS12315	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BF39_RS12320	PF00535	Glycosyl transferase family 2
BF39_RS12325	PF00378	Enoyl-CoA hydratase/isomerase
BF39_RS12330	PF18496	Collagenase G catalytic helper subdomain
BF39_RS12330	PF01752	Collagenase
BF39_RS12330	PF08453	Peptidase family M9 N-terminal
BF39_RS12335	PF02308	MgtC family
BF39_RS12345	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS12350	PF04294	VanW like protein
BF39_RS12360	PF13039	Protein of unknown function (DUF3900)
BF39_RS12360	PF13037	Domain of unknown function (DUF3898)
BF39_RS12380	PF00313	'Cold-shock' DNA-binding domain
BF39_RS12390	PF00258	Flavodoxin
BF39_RS12400	PF00293	NUDIX domain
BF39_RS12410	PF00132	Bacterial transferase hexapeptide (six repeats)
BF39_RS12420	PF00106	short chain dehydrogenase
BF39_RS12430	PF14698	Argininosuccinate lyase C-terminal
BF39_RS12430	PF00206	Lyase
BF39_RS12440	PF01156	Inosine-uridine preferring nucleoside hydrolase
BF39_RS12445	PF00474	Sodium:solute symporter family
BF39_RS12455	PF00171	Aldehyde dehydrogenase family
BF39_RS12465	PF14151	YfhD-like protein
BF39_RS12470	PF13243	Squalene-hopene cyclase C-terminal domain
BF39_RS12470	PF13249	Squalene-hopene cyclase N-terminal domain
BF39_RS12475	PF02681	Divergent PAP2 family
BF39_RS12480	PF00892	EamA-like transporter family
BF39_RS12485	PF06961	Protein of unknown function (DUF1294)
BF39_RS12500	PF10609	NUBPL iron-transfer P-loop NTPase
BF39_RS12510	PF02391	MoaE protein
BF39_RS12515	PF00994	Probable molybdopterin binding domain
BF39_RS12515	PF03454	MoeA C-terminal region (domain IV)
BF39_RS12515	PF03453	MoeA N-terminal region (domain I and II)
BF39_RS12520	PF00899	ThiF family
BF39_RS12525	PF01226	Formate/nitrite transporter
BF39_RS12530	PF04055	Radical SAM superfamily
BF39_RS12530	PF06463	Molybdenum Cofactor Synthesis C
BF39_RS12535	PF02634	FdhD/NarQ family
BF39_RS12540	PF10057	Uncharacterized conserved protein (DUF2294)
BF39_RS12545	PF07849	Protein of unknown function (DUF1641)
BF39_RS12550	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BF39_RS12550	PF01568	Molydopterin dinucleotide binding domain
BF39_RS12550	PF00384	Molybdopterin oxidoreductase
BF39_RS12550	PF00037	4Fe-4S binding domain
BF39_RS12550	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BF39_RS12560	PF03323	Bacillus/Clostridium GerA spore germination protein
BF39_RS12600	PF08241	Methyltransferase domain
BF39_RS12605	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS12610	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS12615	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS12620	PF00375	Sodium:dicarboxylate symporter family
BF39_RS12625	PF03816	Cell envelope-related transcriptional attenuator domain
BF39_RS12635	PF04542	Sigma-70 region 2 
BF39_RS12635	PF08281	Sigma-70, region 4
BF39_RS12660	PF00005	ABC transporter
BF39_RS12660	PF13732	Domain of unknown function (DUF4162)
BF39_RS12670	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BF39_RS12670	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BF39_RS12675	PF03989	DNA gyrase C-terminal domain, beta-propeller
BF39_RS12675	PF00521	DNA gyrase/topoisomerase IV, subunit A
BF39_RS12680	PF00204	DNA gyrase B
BF39_RS12680	PF00986	DNA gyrase B subunit, carboxyl terminus
BF39_RS12680	PF01751	Toprim domain
BF39_RS12680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS12690	PF13380	CoA binding domain
BF39_RS12695	PF13180	PDZ domain
BF39_RS12700	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS12700	PF00072	Response regulator receiver domain
BF39_RS12705	PF04055	Radical SAM superfamily
BF39_RS12710	PF13597	Anaerobic ribonucleoside-triphosphate reductase
BF39_RS12710	PF03477	ATP cone domain
BF39_RS12715	PF02660	Glycerol-3-phosphate acyltransferase
BF39_RS12720	PF01521	Iron-sulphur cluster biosynthesis
BF39_RS12725	PF03061	Thioesterase superfamily
BF39_RS12730	PF01476	LysM domain
BF39_RS12730	PF00704	Glycosyl hydrolases family 18
BF39_RS12740	PF08177	Small acid-soluble spore protein N family
BF39_RS12745	PF13040	Fur-regulated basic protein B
BF39_RS12750	PF00929	Exonuclease
BF39_RS12750	PF11490	DNA polymerase III polC-type N-terminus II
BF39_RS12750	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BF39_RS12750	PF14579	Helix-hairpin-helix motif
BF39_RS12750	PF02811	PHP domain
BF39_RS12750	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BF39_RS12750	PF01336	OB-fold nucleic acid binding domain
BF39_RS12755	PF00578	AhpC/TSA family
BF39_RS12765	PF03412	Peptidase C39 family
BF39_RS12765	PF00005	ABC transporter
BF39_RS12765	PF00664	ABC transporter transmembrane region
BF39_RS12770	PF00694	Aconitase C-terminal domain
BF39_RS12770	PF00330	Aconitase family (aconitate hydratase)
BF39_RS12780	PF01522	Polysaccharide deacetylase
BF39_RS12790	PF08179	Small acid-soluble spore protein P family
BF39_RS12800	PF07690	Major Facilitator Superfamily
BF39_RS12810	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BF39_RS12810	PF01411	tRNA synthetases class II (A)
BF39_RS12810	PF02272	DHHA1 domain
BF39_RS12815	PF00293	NUDIX domain
BF39_RS12815	PF13344	Haloacid dehalogenase-like hydrolase
BF39_RS12825	PF02803	Thiolase, C-terminal domain
BF39_RS12825	PF00108	Thiolase, N-terminal domain
BF39_RS12830	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS12830	PF00501	AMP-binding enzyme
BF39_RS12835	PF02632	BioY family
BF39_RS12840	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS12840	PF00501	AMP-binding enzyme
BF39_RS12855	PF05532	CsbD-like
BF39_RS12885	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF39_RS12885	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS12895	PF13426	PAS domain
BF39_RS12895	PF13188	PAS domain
BF39_RS12895	PF00989	PAS fold
BF39_RS12895	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS12895	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS12900	PF01738	Dienelactone hydrolase family
BF39_RS12905	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS12910	PF00474	Sodium:solute symporter family
BF39_RS12915	PF01645	Conserved region in glutamate synthase
BF39_RS12920	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BF39_RS12925	PF02559	CarD-like/TRCF domain
BF39_RS12930	PF00491	Arginase family
BF39_RS12935	PF01979	Amidohydrolase family
BF39_RS12940	PF01175	Urocanase Rossmann-like domain
BF39_RS12940	PF17392	Urocanase C-terminal domain
BF39_RS12940	PF17391	Urocanase N-terminal domain
BF39_RS12945	PF00221	Aromatic amino acid lyase
BF39_RS12950	PF09021	HutP
BF39_RS12955	PF01209	ubiE/COQ5 methyltransferase family
BF39_RS12980	PF11084	Protein of unknown function (DUF2621)
BF39_RS13010	PF07301	Protein of unknown function (DUF1453)
BF39_RS13015	PF02683	Cytochrome C biogenesis protein transmembrane region
BF39_RS13025	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS13025	PF03466	LysR substrate binding domain
BF39_RS13030	PF03788	LrgA family
BF39_RS13035	PF04172	LrgB-like family 
BF39_RS13040	PF00293	NUDIX domain
BF39_RS13040	PF13344	Haloacid dehalogenase-like hydrolase
BF39_RS13050	PF01925	Sulfite exporter TauE/SafE
BF39_RS13060	PF01471	Putative peptidoglycan binding domain
BF39_RS13060	PF01510	N-acetylmuramoyl-L-alanine amidase
BF39_RS13075	PF00005	ABC transporter
BF39_RS13075	PF00664	ABC transporter transmembrane region
BF39_RS13080	PF00005	ABC transporter
BF39_RS13080	PF00664	ABC transporter transmembrane region
BF39_RS13085	PF03672	Uncharacterised protein family (UPF0154)
BF39_RS13090	PF10747	Sporulation inhibitor of replication protein SirA 
BF39_RS13095	PF02779	Transketolase, pyrimidine binding domain
BF39_RS13095	PF02780	Transketolase, C-terminal domain
BF39_RS13095	PF00456	Transketolase, thiamine diphosphate binding domain
BF39_RS13100	PF07282	Putative transposase DNA-binding domain
BF39_RS13100	PF12323	Helix-turn-helix domain
BF39_RS13100	PF01385	Probable transposase
BF39_RS13110	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS13115	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS13120	PF00005	ABC transporter
BF39_RS13135	PF00149	Calcineurin-like phosphoesterase
BF39_RS13135	PF02872	5'-nucleotidase, C-terminal domain
BF39_RS13140	PF05979	Bacterial protein of unknown function (DUF896)
BF39_RS13145	PF00239	Resolvase, N terminal domain
BF39_RS13150	PF01726	LexA DNA binding domain
BF39_RS13150	PF00717	Peptidase S24-like
BF39_RS13165	PF03551	Transcriptional regulator PadR-like family
BF39_RS13200	PF01476	LysM domain
BF39_RS13200	PF01510	N-acetylmuramoyl-L-alanine amidase
BF39_RS13200	PF01471	Putative peptidoglycan binding domain
BF39_RS13205	PF05105	Bacteriophage holin family 
BF39_RS13365	PF08281	Sigma-70, region 4
BF39_RS13410	PF02511	Thymidylate synthase complementing protein
BF39_RS13415	PF00145	C-5 cytosine-specific DNA methylase
BF39_RS13490	PF01381	Helix-turn-helix
BF39_RS13510	PF00589	Phage integrase family
BF39_RS13510	PF02899	Phage integrase, N-terminal SAM-like domain
BF39_RS13515	PF03951	Glutamine synthetase, beta-Grasp domain
BF39_RS13515	PF00120	Glutamine synthetase, catalytic domain
BF39_RS13520	PF13411	MerR HTH family regulatory protein
BF39_RS13525	PF06838	Methionine gamma-lyase 
BF39_RS13535	PF03458	UPF0126 domain
BF39_RS13540	PF17866	AAA lid domain
BF39_RS13540	PF00004	ATPase family associated with various cellular activities (AAA)
BF39_RS13555	PF17209	Hfq protein
BF39_RS13570	PF06725	3D domain
BF39_RS13570	PF01476	LysM domain
BF39_RS13575	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BF39_RS13575	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BF39_RS13580	PF00294	pfkB family carbohydrate kinase
BF39_RS13585	PF08220	DeoR-like helix-turn-helix domain
BF39_RS13585	PF00455	DeoR C terminal sensor domain
BF39_RS13595	PF04238	Protein of unknown function (DUF420)
BF39_RS13610	PF00324	Amino acid permease
BF39_RS13615	PF00041	Fibronectin type III domain
BF39_RS13615	PF00704	Glycosyl hydrolases family 18
BF39_RS13620	PF10518	TAT (twin-arginine translocation) pathway signal sequence
BF39_RS13620	PF00149	Calcineurin-like phosphoesterase
BF39_RS13625	PF01226	Formate/nitrite transporter
BF39_RS13630	PF00216	Bacterial DNA-binding protein
BF39_RS13635	PF00403	Heavy-metal-associated domain
BF39_RS13640	PF00403	Heavy-metal-associated domain
BF39_RS13645	PF02583	Metal-sensitive transcriptional repressor
BF39_RS13655	PF00756	Putative esterase
BF39_RS13660	PF00005	ABC transporter
BF39_RS13665	PF01032	FecCD transport family
BF39_RS13670	PF01032	FecCD transport family
BF39_RS13675	PF01497	Periplasmic binding protein
BF39_RS13685	PF03372	Endonuclease/Exonuclease/phosphatase family
BF39_RS13690	PF02805	Metal binding domain of Ada
BF39_RS13690	PF12833	Helix-turn-helix domain
BF39_RS13695	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
BF39_RS13695	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BF39_RS13700	PF07934	8-oxoguanine DNA glycosylase, N-terminal domain
BF39_RS13700	PF00730	HhH-GPD superfamily base excision DNA repair protein
BF39_RS13705	PF01546	Peptidase family M20/M25/M40
BF39_RS13705	PF07687	Peptidase dimerisation domain
BF39_RS13725	PF00561	alpha/beta hydrolase fold
BF39_RS13730	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS13735	PF00563	EAL domain
BF39_RS13735	PF03707	Bacterial signalling protein N terminal repeat
BF39_RS13735	PF00990	Diguanylate cyclase, GGDEF domain
BF39_RS13750	PF10787	Uncharacterised protein from bacillus cereus group
BF39_RS13755	PF04172	LrgB-like family 
BF39_RS13760	PF03788	LrgA family
BF39_RS13765	PF00155	Aminotransferase class I and II
BF39_RS13765	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS13770	PF00364	Biotin-requiring enzyme
BF39_RS13770	PF00561	alpha/beta hydrolase fold
BF39_RS13775	PF02585	GlcNAc-PI de-N-acetylase
BF39_RS13785	PF00388	Phosphatidylinositol-specific phospholipase C, X domain
BF39_RS13790	PF00082	Subtilase family
BF39_RS13795	PF07486	Cell Wall Hydrolase
BF39_RS13800	PF03275	UDP-galactopyranose mutase
BF39_RS13805	PF00884	Sulfatase
BF39_RS13810	PF00350	Dynamin family
BF39_RS13820	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
BF39_RS13825	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS13825	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS13830	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS13830	PF00072	Response regulator receiver domain
BF39_RS13845	PF00005	ABC transporter
BF39_RS13850	PF01119	DNA mismatch repair protein, C-terminal domain
BF39_RS13850	PF08676	MutL C terminal dimerisation domain
BF39_RS13855	PF00488	MutS domain V
BF39_RS13855	PF05192	MutS domain III
BF39_RS13855	PF01624	MutS domain I
BF39_RS13855	PF05190	MutS family domain IV
BF39_RS13855	PF05188	MutS domain II
BF39_RS13860	PF10628	Outer spore coat protein E (CotE)
BF39_RS13865	PF06133	Control of competence regulator ComK, YlbF/YmcA
BF39_RS13870	PF01938	TRAM domain
BF39_RS13870	PF00919	Uncharacterized protein family UPF0004
BF39_RS13870	PF04055	Radical SAM superfamily
BF39_RS13875	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF39_RS13880	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
BF39_RS13880	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
BF39_RS13880	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
BF39_RS13885	PF01244	Membrane dipeptidase (Peptidase family M19)
BF39_RS13890	PF04232	Stage V sporulation protein S (SpoVS)
BF39_RS13895	PF13277	YmdB-like protein
BF39_RS13900	PF01966	HD domain
BF39_RS13900	PF12072	Domain of unknown function (DUF3552)
BF39_RS13900	PF00013	KH domain
BF39_RS13910	PF00154	recA bacterial DNA recombination protein
BF39_RS13915	PF02464	Competence-damaged protein
BF39_RS13915	PF18146	Damage-inducible protein CinA KH domain
BF39_RS13915	PF00994	Probable molybdopterin binding domain
BF39_RS13920	PF01066	CDP-alcohol phosphatidyltransferase
BF39_RS13925	PF13464	Domain of unknown function (DUF4115)
BF39_RS13930	PF11868	Protein of unknown function (DUF3388)
BF39_RS13935	PF11588	Protein of unknown function (DUF3243)
BF39_RS13945	PF05193	Peptidase M16 inactive domain
BF39_RS13945	PF00675	Insulinase (Peptidase family M16)
BF39_RS13950	PF05193	Peptidase M16 inactive domain
BF39_RS13955	PF02653	Branched-chain amino acid transport system / permease component
BF39_RS13960	PF02653	Branched-chain amino acid transport system / permease component
BF39_RS13965	PF02653	Branched-chain amino acid transport system / permease component
BF39_RS13970	PF00005	ABC transporter
BF39_RS13975	PF02608	ABC transporter substrate-binding protein PnrA-like
BF39_RS13980	PF07702	UTRA domain
BF39_RS13980	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS13985	PF09397	Ftsk gamma domain
BF39_RS13985	PF17854	FtsK alpha domain
BF39_RS13985	PF01580	FtsK/SpoIIIE family
BF39_RS13990	PF14035	YlzJ-like protein
BF39_RS13995	PF00574	Clp protease
BF39_RS14000	PF17770	Ribonuclease J C-terminal domain
BF39_RS14000	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
BF39_RS14000	PF00753	Metallo-beta-lactamase superfamily
BF39_RS14010	PF00701	Dihydrodipicolinate synthetase family
BF39_RS14015	PF13840	ACT domain 
BF39_RS14015	PF00696	Amino acid kinase family
BF39_RS14020	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BF39_RS14020	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BF39_RS14025	PF02441	Flavoprotein
BF39_RS14030	PF16924	Dipicolinate synthase subunit A N-terminal domain
BF39_RS14030	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BF39_RS14035	PF05239	PRC-barrel domain
BF39_RS14040	PF05193	Peptidase M16 inactive domain
BF39_RS14040	PF00675	Insulinase (Peptidase family M16)
BF39_RS14045	PF01522	Polysaccharide deacetylase
BF39_RS14050	PF03725	3' exoribonuclease family, domain 2
BF39_RS14050	PF01138	3' exoribonuclease family, domain 1
BF39_RS14050	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
BF39_RS14050	PF00013	KH domain
BF39_RS14050	PF00575	S1 RNA binding domain
BF39_RS14055	PF00312	Ribosomal protein S15
BF39_RS14060	PF06574	FAD synthetase
BF39_RS14060	PF01687	Riboflavin kinase
BF39_RS14065	PF01509	TruB family pseudouridylate synthase (N terminal domain)
BF39_RS14065	PF16198	tRNA pseudouridylate synthase B C-terminal domain
BF39_RS14070	PF02033	Ribosome-binding factor A
BF39_RS14075	PF04456	Protein of unknown function (DUF503)
BF39_RS14080	PF11987	Translation-initiation factor 2
BF39_RS14080	PF04760	Translation initiation factor IF-2, N-terminal region
BF39_RS14080	PF00009	Elongation factor Tu GTP binding domain
BF39_RS14085	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
BF39_RS14090	PF04296	Protein of unknown function (DUF448)
BF39_RS14095	PF13184	NusA-like KH domain
BF39_RS14095	PF08529	NusA N-terminal domain
BF39_RS14095	PF00575	S1 RNA binding domain
BF39_RS14100	PF02576	RimP N-terminal domain
BF39_RS14100	PF17384	RimP C-terminal SH3 domain
BF39_RS14105	PF00929	Exonuclease
BF39_RS14105	PF14579	Helix-hairpin-helix motif
BF39_RS14105	PF11490	DNA polymerase III polC-type N-terminus II
BF39_RS14105	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BF39_RS14105	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BF39_RS14105	PF14480	DNA polymerase III polC-type N-terminus I
BF39_RS14105	PF02811	PHP domain
BF39_RS14110	PF04073	Aminoacyl-tRNA editing domain
BF39_RS14110	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF39_RS14110	PF03129	Anticodon binding domain
BF39_RS14115	PF17820	PDZ domain
BF39_RS14115	PF02163	Peptidase family M50
BF39_RS14120	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
BF39_RS14120	PF13288	DXP reductoisomerase C-terminal domain
BF39_RS14120	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
BF39_RS14130	PF01255	Putative undecaprenyl diphosphate synthase
BF39_RS14135	PF01765	Ribosome recycling factor
BF39_RS14140	PF00696	Amino acid kinase family
BF39_RS14145	PF00889	Elongation factor TS
BF39_RS14150	PF00318	Ribosomal protein S2
BF39_RS14155	PF08222	CodY helix-turn-helix domain
BF39_RS14155	PF06018	CodY GAF-like domain
BF39_RS14160	PF00004	ATPase family associated with various cellular activities (AAA)
BF39_RS14160	PF10431	C-terminal, D2-small domain, of ClpB protein 
BF39_RS14160	PF07724	AAA domain (Cdc48 subfamily)
BF39_RS14165	PF00227	Proteasome subunit
BF39_RS14170	PF02899	Phage integrase, N-terminal SAM-like domain
BF39_RS14170	PF00589	Phage integrase family
BF39_RS14175	PF01134	Glucose inhibited division protein A
BF39_RS14180	PF01396	Topoisomerase DNA binding C4 zinc finger
BF39_RS14180	PF01751	Toprim domain
BF39_RS14180	PF01131	DNA topoisomerase
BF39_RS14190	PF02629	CoA binding domain
BF39_RS14190	PF00549	CoA-ligase
BF39_RS14195	PF00549	CoA-ligase
BF39_RS14195	PF08442	ATP-grasp domain
BF39_RS14200	PF01351	Ribonuclease HII
BF39_RS14205	PF01926	50S ribosome-binding GTPase
BF39_RS14210	PF10502	Signal peptidase, peptidase S26 
BF39_RS14215	PF01245	Ribosomal protein L19
BF39_RS14220	PF01746	tRNA (Guanine-1)-methyltransferase
BF39_RS14225	PF01782	RimM N-terminal domain
BF39_RS14225	PF05239	PRC-barrel domain
BF39_RS14235	PF00886	Ribosomal protein S16
BF39_RS14240	PF02881	SRP54-type protein, helical bundle domain
BF39_RS14240	PF00448	SRP54-type protein, GTPase domain
BF39_RS14240	PF02978	Signal peptide binding domain
BF39_RS14245	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
BF39_RS14250	PF00448	SRP54-type protein, GTPase domain
BF39_RS14250	PF02881	SRP54-type protein, helical bundle domain
BF39_RS14255	PF02463	RecF/RecN/SMC N terminal domain
BF39_RS14255	PF06470	SMC proteins Flexible Hinge Domain
BF39_RS14260	PF14622	Ribonuclease-III-like
BF39_RS14260	PF00035	Double-stranded RNA binding motif
BF39_RS14265	PF00550	Phosphopantetheine attachment site
BF39_RS14275	PF00698	Acyl transferase domain
BF39_RS14280	PF02504	Fatty acid synthesis protein
BF39_RS14285	PF03061	Thioesterase superfamily
BF39_RS14290	PF00270	DEAD/DEAH box helicase
BF39_RS14290	PF00271	Helicase conserved C-terminal domain
BF39_RS14290	PF17191	RecG wedge domain
BF39_RS14295	PF13684	Dihydroxyacetone kinase family
BF39_RS14295	PF02734	DAK2 domain
BF39_RS14300	PF03780	Asp23 family, cell envelope-related function
BF39_RS14305	PF00830	Ribosomal L28 family
BF39_RS14310	PF08183	Stage V sporulation protein family
BF39_RS14315	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
BF39_RS14315	PF04263	Thiamin pyrophosphokinase, catalytic domain
BF39_RS14320	PF00834	Ribulose-phosphate 3 epimerase family
BF39_RS14325	PF03193	RsgA GTPase
BF39_RS14325	PF16745	RsgA N-terminal domain
BF39_RS14330	PF00069	Protein kinase domain
BF39_RS14330	PF03793	PASTA domain
BF39_RS14340	PF04055	Radical SAM superfamily
BF39_RS14345	PF01189	16S rRNA methyltransferase RsmB/F
BF39_RS14345	PF01029	NusB family
BF39_RS14350	PF00551	Formyl transferase
BF39_RS14350	PF02911	Formyl transferase, C-terminal domain
BF39_RS14355	PF01327	Polypeptide deformylase
BF39_RS14360	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
BF39_RS14360	PF17764	3′ DNA-binding domain (3′BD)
BF39_RS14360	PF04851	Type III restriction enzyme, res subunit
BF39_RS14360	PF18074	Primosomal protein N C-terminal domain
BF39_RS14360	PF00271	Helicase conserved C-terminal domain
BF39_RS14365	PF02441	Flavoprotein
BF39_RS14365	PF04127	DNA / pantothenate metabolism flavoprotein
BF39_RS14370	PF01192	RNA polymerase Rpb6 
BF39_RS14375	PF00625	Guanylate kinase
BF39_RS14380	PF04025	Domain of unknown function (DUF370)
BF39_RS14385	PF08340	Domain of unknown function (DUF1732)
BF39_RS14385	PF03755	YicC-like family, N-terminal region 
BF39_RS14390	PF00689	Cation transporting ATPase, C-terminus
BF39_RS14390	PF00690	Cation transporter/ATPase, N-terminus
BF39_RS14395	PF05670	NFACT protein RNA binding domain
BF39_RS14400	PF01321	Creatinase/Prolidase N-terminal domain
BF39_RS14400	PF00557	Metallopeptidase family M24
BF39_RS14430	PF00156	Phosphoribosyl transferase domain
BF39_RS14435	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
BF39_RS14440	PF01180	Dihydroorotate dehydrogenase
BF39_RS14445	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
BF39_RS14445	PF00175	Oxidoreductase NAD-binding domain 
BF39_RS14450	PF02142	MGS-like domain
BF39_RS14450	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BF39_RS14450	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BF39_RS14455	PF00117	Glutamine amidotransferase class-I
BF39_RS14455	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
BF39_RS14460	PF01979	Amidohydrolase family
BF39_RS14465	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BF39_RS14465	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BF39_RS14470	PF00860	Permease family
BF39_RS14475	PF00156	Phosphoribosyl transferase domain
BF39_RS14480	PF00849	RNA pseudouridylate synthase
BF39_RS14480	PF01479	S4 domain
BF39_RS14485	PF01252	Signal peptidase (SPase) II
BF39_RS14495	PF08264	Anticodon-binding domain of tRNA
BF39_RS14495	PF00133	tRNA synthetases class I (I, L, M and V)
BF39_RS14495	PF06827	Zinc finger found in FPG and IleRS
BF39_RS14500	PF05103	DivIVA protein
BF39_RS14505	PF01479	S4 domain
BF39_RS14505	PF17774	Putative RNA-binding domain in YlmH
BF39_RS14510	PF02325	YGGT family
BF39_RS14515	PF04472	Cell division protein SepF
BF39_RS14520	PF01168	Alanine racemase, N-terminal domain
BF39_RS14525	PF02578	Multi-copper polyphenol oxidoreductase laccase
BF39_RS14530	PF05239	PRC-barrel domain
BF39_RS14535	PF04542	Sigma-70 region 2 
BF39_RS14535	PF04539	Sigma-70 region 3
BF39_RS14535	PF04545	Sigma-70, region 4
BF39_RS14540	PF04542	Sigma-70 region 2 
BF39_RS14540	PF04545	Sigma-70, region 4
BF39_RS14545	PF03419	Sporulation factor SpoIIGA 
BF39_RS14550	PF12327	FtsZ family, C-terminal domain
BF39_RS14550	PF00091	Tubulin/FtsZ family, GTPase domain
BF39_RS14555	PF02491	SHS2 domain inserted in FTSA
BF39_RS14560	PF08478	POTRA domain, FtsQ-type
BF39_RS14560	PF03799	Cell division protein FtsQ
BF39_RS14565	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
BF39_RS14565	PF01565	FAD binding domain 
BF39_RS14570	PF04101	Glycosyltransferase family 28 C-terminal domain
BF39_RS14570	PF03033	Glycosyltransferase family 28 N-terminal domain
BF39_RS14575	PF01098	Cell cycle protein
BF39_RS14580	PF08245	Mur ligase middle domain
BF39_RS14580	PF02875	Mur ligase family, glutamate ligase domain
BF39_RS14585	PF00953	Glycosyl transferase family 4
BF39_RS14585	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
BF39_RS14590	PF08245	Mur ligase middle domain
BF39_RS14590	PF01225	Mur ligase family, catalytic domain
BF39_RS14590	PF02875	Mur ligase family, glutamate ligase domain
BF39_RS14595	PF03717	Penicillin-binding Protein dimerisation domain
BF39_RS14595	PF03793	PASTA domain
BF39_RS14595	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS14600	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS14600	PF03717	Penicillin-binding Protein dimerisation domain
BF39_RS14600	PF03793	PASTA domain
BF39_RS14605	PF04977	Septum formation initiator
BF39_RS14610	PF01795	MraW methylase family
BF39_RS14615	PF10079	Bacillithiol biosynthesis BshC 
BF39_RS14620	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BF39_RS14620	PF02558	Ketopantoate reductase PanE/ApbA
BF39_RS14625	PF00583	Acetyltransferase (GNAT) family
BF39_RS14635	PF01783	Ribosomal L32p protein family
BF39_RS14640	PF02620	Large ribosomal RNA subunit accumulation protein YceD
BF39_RS14685	PF12123	N-acetylmuramoyl-l-alanine amidase
BF39_RS14685	PF01510	N-acetylmuramoyl-L-alanine amidase
BF39_RS14690	PF05105	Bacteriophage holin family 
BF39_RS14775	PF00574	Clp protease
BF39_RS14785	PF03354	Phage Terminase 
BF39_RS14805	PF10137	Predicted nucleotide-binding protein containing TIR-like domain
BF39_RS14810	PF00589	Phage integrase family
BF39_RS14865	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS14880	PF00692	dUTPase
BF39_RS14890	PF04545	Sigma-70, region 4
BF39_RS14890	PF04539	Sigma-70 region 3
BF39_RS14890	PF04542	Sigma-70 region 2 
BF39_RS14915	PF01695	IstB-like ATP binding protein
BF39_RS14915	PF07319	Primosomal protein DnaI N-terminus
BF39_RS14945	PF01381	Helix-turn-helix
BF39_RS14955	PF01381	Helix-turn-helix
BF39_RS14970	PF00589	Phage integrase family
BF39_RS14970	PF14659	Phage integrase, N-terminal SAM-like domain
BF39_RS14975	PF05636	HIGH Nucleotidyl Transferase
BF39_RS14980	PF05362	Lon protease (S16) C-terminal proteolytic domain
BF39_RS14980	PF13180	PDZ domain
BF39_RS14985	PF01734	Patatin-like phospholipase
BF39_RS14990	PF07670	Nucleoside recognition
BF39_RS14995	PF01467	Cytidylyltransferase-like
BF39_RS15010	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
BF39_RS15015	PF06133	Control of competence regulator ComK, YlbF/YmcA
BF39_RS15020	PF00300	Histidine phosphatase superfamily (branch 1)
BF39_RS15025	PF14003	YlbE-like protein
BF39_RS15030	PF14071	Putative coat protein
BF39_RS15035	PF00188	Cysteine-rich secretory protein family
BF39_RS15035	PF14504	CAP-associated N-terminal
BF39_RS15040	PF08868	YugN-like family
BF39_RS15045	PF00795	Carbon-nitrogen hydrolase
BF39_RS15050	PF09678	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
BF39_RS15055	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
BF39_RS15060	PF00510	Cytochrome c oxidase subunit III
BF39_RS15065	PF00115	Cytochrome C and Quinol oxidase polypeptide I
BF39_RS15070	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
BF39_RS15070	PF00034	Cytochrome c
BF39_RS15070	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
BF39_RS15075	PF01040	UbiA prenyltransferase family
BF39_RS15080	PF02628	Cytochrome oxidase assembly protein
BF39_RS15085	PF02436	Conserved carboxylase domain
BF39_RS15085	PF00682	HMGL-like
BF39_RS15085	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BF39_RS15085	PF00289	Biotin carboxylase, N-terminal domain
BF39_RS15085	PF02785	Biotin carboxylase C-terminal domain
BF39_RS15085	PF00364	Biotin-requiring enzyme
BF39_RS15090	PF01098	Cell cycle protein
BF39_RS15095	PF07408	Protein of unknown function (DUF1507)
BF39_RS15105	PF02562	PhoH-like protein
BF39_RS15105	PF13638	PIN domain
BF39_RS15115	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
BF39_RS15125	PF14036	YlaH-like protein
BF39_RS15130	PF00679	Elongation factor G C-terminus
BF39_RS15130	PF14492	Elongation Factor G, domain II
BF39_RS15130	PF03144	Elongation factor Tu domain 2
BF39_RS15130	PF00009	Elongation factor Tu GTP binding domain
BF39_RS15140	PF00459	Inositol monophosphatase family
BF39_RS15150	PF06335	Protein of unknown function (DUF1054)
BF39_RS15155	PF05256	Uncharacterised protein family (UPF0223)
BF39_RS15160	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BF39_RS15160	PF01276	Orn/Lys/Arg decarboxylase, major domain
BF39_RS15200	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS15200	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF39_RS15205	PF02817	e3 binding domain
BF39_RS15205	PF00364	Biotin-requiring enzyme
BF39_RS15205	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BF39_RS15210	PF02780	Transketolase, C-terminal domain
BF39_RS15210	PF02779	Transketolase, pyrimidine binding domain
BF39_RS15215	PF00676	Dehydrogenase E1 component
BF39_RS15225	PF01327	Polypeptide deformylase
BF39_RS15235	PF07288	Protein of unknown function (DUF1447)
BF39_RS15240	PF00753	Metallo-beta-lactamase superfamily
BF39_RS15240	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
BF39_RS15240	PF17770	Ribonuclease J C-terminal domain
BF39_RS15245	PF02080	TrkA-C domain
BF39_RS15245	PF02254	TrkA-N domain
BF39_RS15255	PF01546	Peptidase family M20/M25/M40
BF39_RS15255	PF07687	Peptidase dimerisation domain
BF39_RS15260	PF00132	Bacterial transferase hexapeptide (six repeats)
BF39_RS15260	PF14602	Hexapeptide repeat of succinyl-transferase
BF39_RS15260	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
BF39_RS15265	PF03466	LysR substrate binding domain
BF39_RS15265	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS15280	PF04308	Ribonuclease H-like
BF39_RS15290	PF08796	Protein of unknown function (DUF1797)
BF39_RS15305	PF10388	EAL-domain associated signalling protein domain
BF39_RS15305	PF00563	EAL domain
BF39_RS15315	PF00149	Calcineurin-like phosphoesterase
BF39_RS15315	PF10518	TAT (twin-arginine translocation) pathway signal sequence
BF39_RS15325	PF02503	Polyphosphate kinase middle domain
BF39_RS15325	PF13090	Polyphosphate kinase C-terminal domain 2
BF39_RS15325	PF17941	Polyphosphate kinase C-terminal domain 1
BF39_RS15325	PF13089	Polyphosphate kinase N-terminal domain
BF39_RS15330	PF02541	Ppx/GppA phosphatase family
BF39_RS15335	PF14177	YkyB-like protein
BF39_RS15365	PF07690	Major Facilitator Superfamily
BF39_RS15380	PF01717	Cobalamin-independent synthase, Catalytic domain
BF39_RS15380	PF08267	Cobalamin-independent synthase, N-terminal domain
BF39_RS15390	PF14040	Deoxyribonuclease NucA/NucB
BF39_RS15400	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS15400	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS15410	PF00155	Aminotransferase class I and II
BF39_RS15415	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS15415	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BF39_RS15420	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS15425	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS15430	PF13416	Bacterial extracellular solute-binding protein
BF39_RS15435	PF00128	Alpha amylase, catalytic domain
BF39_RS15435	PF16657	Maltogenic Amylase, C-terminal domain
BF39_RS15435	PF02903	Alpha amylase, N-terminal ig-like domain
BF39_RS15440	PF16657	Maltogenic Amylase, C-terminal domain
BF39_RS15440	PF00128	Alpha amylase, catalytic domain
BF39_RS15445	PF03459	TOBE domain
BF39_RS15445	PF00005	ABC transporter
BF39_RS15445	PF17912	MalK OB fold domain
BF39_RS15485	PF00108	Thiolase, N-terminal domain
BF39_RS15485	PF02803	Thiolase, C-terminal domain
BF39_RS15490	PF00293	NUDIX domain
BF39_RS15525	PF03551	Transcriptional regulator PadR-like family
BF39_RS15540	PF01008	Initiation factor 2 subunit family
BF39_RS15545	PF01636	Phosphotransferase enzyme family
BF39_RS15550	PF00795	Carbon-nitrogen hydrolase
BF39_RS15555	PF00155	Aminotransferase class I and II
BF39_RS15560	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
BF39_RS15560	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
BF39_RS15570	PF00596	Class II Aldolase and Adducin N-terminal domain
BF39_RS15575	PF03079	ARD/ARD' family
BF39_RS15595	PF00990	Diguanylate cyclase, GGDEF domain
BF39_RS15595	PF08448	PAS fold
BF39_RS15600	PF00881	Nitroreductase family
BF39_RS15615	PF02896	PEP-utilising enzyme, TIM barrel domain
BF39_RS15615	PF00391	PEP-utilising enzyme, mobile domain
BF39_RS15615	PF05524	PEP-utilising enzyme, N-terminal
BF39_RS15620	PF00381	PTS HPr component phosphorylation site
BF39_RS15625	PF02378	Phosphotransferase system, EIIC 
BF39_RS15625	PF00367	phosphotransferase system, EIIB
BF39_RS15625	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BF39_RS15630	PF03123	CAT RNA binding domain
BF39_RS15630	PF00874	PRD domain
BF39_RS15640	PF07702	UTRA domain
BF39_RS15640	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS15645	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
BF39_RS15650	PF01979	Amidohydrolase family
BF39_RS15660	PF04079	Segregation and condensation complex subunit ScpB
BF39_RS15670	PF02616	Segregation and condensation protein ScpA
BF39_RS15680	PF03745	Domain of unknown function (DUF309)
BF39_RS15685	PF00583	Acetyltransferase (GNAT) family
BF39_RS15695	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
BF39_RS15700	PF06207	Protein of unknown function (DUF1002)
BF39_RS15710	PF03323	Bacillus/Clostridium GerA spore germination protein
BF39_RS15715	PF14097	Stage V sporulation protein AE1
BF39_RS15720	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BF39_RS15725	PF07451	Stage V sporulation protein AD (SpoVAD)
BF39_RS15730	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BF39_RS15735	PF13782	Stage V sporulation protein AB
BF39_RS15740	PF12164	Stage V sporulation protein AA
BF39_RS15750	PF00209	Sodium:neurotransmitter symporter family
BF39_RS15755	PF04539	Sigma-70 region 3
BF39_RS15755	PF04545	Sigma-70, region 4
BF39_RS15755	PF04542	Sigma-70 region 2 
BF39_RS15760	PF13581	Histidine kinase-like ATPase domain
BF39_RS15765	PF01740	STAS domain
BF39_RS15770	PF07943	Penicillin-binding protein 5, C-terminal domain
BF39_RS15770	PF00768	D-alanyl-D-alanine carboxypeptidase
BF39_RS15775	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS15780	PF00005	ABC transporter
BF39_RS15800	PF01047	MarR family
BF39_RS15810	PF00860	Permease family
BF39_RS15815	PF01544	CorA-like Mg2+ transporter protein
BF39_RS15820	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
BF39_RS15820	PF02885	Glycosyl transferase family, helical bundle domain
BF39_RS15820	PF00591	Glycosyl transferase family, a/b domain
BF39_RS15825	PF01048	Phosphorylase superfamily
BF39_RS15830	PF01676	Metalloenzyme superfamily
BF39_RS15840	PF00589	Phage integrase family
BF39_RS15840	PF02899	Phage integrase, N-terminal SAM-like domain
BF39_RS15845	PF14004	Protein of unknown function (DUF4227)
BF39_RS15850	PF01475	Ferric uptake regulator family
BF39_RS15855	PF01944	Stage II sporulation protein M
BF39_RS15865	PF00293	NUDIX domain
BF39_RS15870	PF13072	Mother cell inhibitor of FtsZ
BF39_RS15875	PF00248	Aldo/keto reductase family
BF39_RS15880	PF00248	Aldo/keto reductase family
BF39_RS15885	PF13673	Acetyltransferase (GNAT) domain
BF39_RS15885	PF04229	GrpB protein
BF39_RS15895	PF02872	5'-nucleotidase, C-terminal domain
BF39_RS15895	PF00149	Calcineurin-like phosphoesterase
BF39_RS15895	PF00565	Staphylococcal nuclease homologue
BF39_RS15895	PF00746	LPXTG cell wall anchor motif
BF39_RS15905	PF12146	Serine aminopeptidase, S33
BF39_RS15910	PF13726	Na+-H+ antiporter family
BF39_RS15910	PF03553	Na+/H+ antiporter family
BF39_RS15915	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS15920	PF00583	Acetyltransferase (GNAT) family
BF39_RS15925	PF12146	Serine aminopeptidase, S33
BF39_RS15930	PF10827	Protein of unknown function (DUF2552) 
BF39_RS15940	PF01872	RibD C-terminal domain
BF39_RS15940	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BF39_RS15945	PF00677	Lumazine binding domain
BF39_RS15950	PF00925	GTP cyclohydrolase II
BF39_RS15950	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
BF39_RS15955	PF00885	6,7-dimethyl-8-ribityllumazine synthase
BF39_RS15965	PF06968	Biotin and Thiamin Synthesis associated domain
BF39_RS15965	PF04055	Radical SAM superfamily
BF39_RS15970	PF13847	Methyltransferase domain
BF39_RS15975	PF08241	Methyltransferase domain
BF39_RS15975	PF12697	Alpha/beta hydrolase family
BF39_RS15980	PF00155	Aminotransferase class I and II
BF39_RS15990	PF00202	Aminotransferase class-III
BF39_RS16000	PF03553	Na+/H+ antiporter family
BF39_RS16005	PF02872	5'-nucleotidase, C-terminal domain
BF39_RS16005	PF00149	Calcineurin-like phosphoesterase
BF39_RS16015	PF01037	Lrp/AsnC ligand binding domain
BF39_RS16015	PF13404	AsnC-type helix-turn-helix domain
BF39_RS16030	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BF39_RS16030	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BF39_RS16035	PF00202	Aminotransferase class-III
BF39_RS16040	PF00696	Amino acid kinase family
BF39_RS16045	PF01960	ArgJ family
BF39_RS16050	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BF39_RS16050	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BF39_RS16060	PF00106	short chain dehydrogenase
BF39_RS16065	PF00753	Metallo-beta-lactamase superfamily
BF39_RS16075	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BF39_RS16075	PF03807	NADP oxidoreductase coenzyme F420-dependent
BF39_RS16080	PF03313	Serine dehydratase alpha chain
BF39_RS16085	PF01842	ACT domain
BF39_RS16085	PF03315	Serine dehydratase beta chain
BF39_RS16095	PF12706	Beta-lactamase superfamily domain
BF39_RS16095	PF00753	Metallo-beta-lactamase superfamily
BF39_RS16105	PF00817	impB/mucB/samB family
BF39_RS16105	PF11799	impB/mucB/samB family C-terminal domain
BF39_RS16105	PF11798	IMS family HHH motif
BF39_RS16115	PF01546	Peptidase family M20/M25/M40
BF39_RS16115	PF07687	Peptidase dimerisation domain
BF39_RS16120	PF13302	Acetyltransferase (GNAT) domain
BF39_RS16135	PF03734	L,D-transpeptidase catalytic domain
BF39_RS16140	PF06081	Aromatic acid exporter family member 1
BF39_RS16140	PF11728	Putative aromatic acid exporter C-terminal domain
BF39_RS16145	PF00005	ABC transporter
BF39_RS16150	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS16155	PF00497	Bacterial extracellular solute-binding proteins, family 3
BF39_RS16165	PF06491	Disulphide isomerase
BF39_RS16170	PF11208	Protein of unknown function (DUF2992)
BF39_RS16180	PF01098	Cell cycle protein
BF39_RS16190	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BF39_RS16190	PF00364	Biotin-requiring enzyme
BF39_RS16190	PF02817	e3 binding domain
BF39_RS16195	PF02780	Transketolase, C-terminal domain
BF39_RS16195	PF02779	Transketolase, pyrimidine binding domain
BF39_RS16200	PF00676	Dehydrogenase E1 component
BF39_RS16205	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS16205	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF39_RS16210	PF00871	Acetokinase family
BF39_RS16215	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BF39_RS16215	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BF39_RS16220	PF01515	Phosphate acetyl/butaryl transferase
BF39_RS16230	PF02954	Bacterial regulatory protein, Fis family
BF39_RS16230	PF00989	PAS fold
BF39_RS16230	PF00158	Sigma-54 interaction domain
BF39_RS16240	PF03009	Glycerophosphoryl diester phosphodiesterase family
BF39_RS16245	PF14174	YycC-like protein
BF39_RS16255	PF00072	Response regulator receiver domain
BF39_RS16255	PF08769	Sporulation initiation factor Spo0A C terminal
BF39_RS16260	PF17820	PDZ domain
BF39_RS16260	PF05580	SpoIVB peptidase S55
BF39_RS16265	PF13476	AAA domain
BF39_RS16270	PF02863	Arginine repressor, C-terminal domain
BF39_RS16270	PF01316	Arginine repressor, DNA binding domain
BF39_RS16275	PF01728	FtsJ-like methyltransferase
BF39_RS16275	PF01479	S4 domain
BF39_RS16280	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
BF39_RS16280	PF02780	Transketolase, C-terminal domain
BF39_RS16280	PF02779	Transketolase, pyrimidine binding domain
BF39_RS16285	PF00348	Polyprenyl synthetase
BF39_RS16290	PF02609	Exonuclease VII small subunit
BF39_RS16295	PF02601	Exonuclease VII, large subunit
BF39_RS16295	PF13742	OB-fold nucleic acid binding domain
BF39_RS16300	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
BF39_RS16300	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
BF39_RS16305	PF01029	NusB family
BF39_RS16310	PF03780	Asp23 family, cell envelope-related function
BF39_RS16315	PF02785	Biotin carboxylase C-terminal domain
BF39_RS16315	PF00289	Biotin carboxylase, N-terminal domain
BF39_RS16315	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BF39_RS16320	PF00364	Biotin-requiring enzyme
BF39_RS16330	PF12685	SpoIIIAH-like protein
BF39_RS16340	PF09581	Stage III sporulation protein AF (Spore_III_AF)
BF39_RS16345	PF09546	Stage III sporulation protein AE (spore_III_AE)
BF39_RS16350	PF06686	Stage III sporulation protein AC/AD protein family
BF39_RS16355	PF06686	Stage III sporulation protein AC/AD protein family
BF39_RS16360	PF09548	Stage III sporulation protein AB (spore_III_AB)
BF39_RS16385	PF01132	Elongation factor P (EF-P) OB domain
BF39_RS16385	PF08207	Elongation factor P (EF-P) KOW-like domain
BF39_RS16385	PF09285	Elongation factor P, C-terminal
BF39_RS16390	PF00557	Metallopeptidase family M24
BF39_RS16390	PF01321	Creatinase/Prolidase N-terminal domain
BF39_RS16395	PF01220	Dehydroquinase class II
BF39_RS16400	PF11085	Conserved membrane protein YqhR
BF39_RS16405	PF07136	Protein of unknown function (DUF1385)
BF39_RS16415	PF13419	Haloacid dehalogenase-like hydrolase
BF39_RS16420	PF02742	Iron dependent repressor, metal binding and dimerisation domain
BF39_RS16420	PF01325	Iron dependent repressor, N-terminal DNA binding domain
BF39_RS16435	PF03099	Biotin/lipoate A/B protein ligase family
BF39_RS16440	PF00581	Rhodanese-like domain
BF39_RS16445	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BF39_RS16445	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS16455	PF00893	Small Multidrug Resistance protein
BF39_RS16460	PF00893	Small Multidrug Resistance protein
BF39_RS16500	PF00005	ABC transporter
BF39_RS16505	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS16520	PF02347	Glycine cleavage system P-protein
BF39_RS16525	PF02347	Glycine cleavage system P-protein
BF39_RS16530	PF08669	Glycine cleavage T-protein C-terminal barrel domain
BF39_RS16530	PF01571	Aminomethyltransferase folate-binding domain
BF39_RS16535	PF00176	SNF2 family N-terminal domain
BF39_RS16535	PF00271	Helicase conserved C-terminal domain
BF39_RS16540	PF11079	Bacterial protein YqhG of unknown function
BF39_RS16560	PF14038	YqzE-like protein
BF39_RS16565	PF01202	Shikimate kinase
BF39_RS16590	PF07963	Prokaryotic N-terminal methylation motif
BF39_RS16600	PF00482	Type II secretion system (T2SS), protein F
BF39_RS16605	PF00437	Type II/IV secretion system protein
BF39_RS16615	PF11117	Protein of unknown function (DUF2626)
BF39_RS16620	PF00375	Sodium:dicarboxylate symporter family
BF39_RS16655	PF03033	Glycosyltransferase family 28 N-terminal domain
BF39_RS16655	PF04101	Glycosyltransferase family 28 C-terminal domain
BF39_RS16660	PF02965	Vitamin B12 dependent methionine synthase, activation domain
BF39_RS16660	PF00809	Pterin binding enzyme
BF39_RS16660	PF02310	B12 binding domain
BF39_RS16660	PF02607	B12 binding domain
BF39_RS16660	PF02574	Homocysteine S-methyltransferase
BF39_RS16665	PF02574	Homocysteine S-methyltransferase
BF39_RS16665	PF02219	Methylenetetrahydrofolate reductase
BF39_RS16675	PF01053	Cys/Met metabolism PLP-dependent enzyme
BF39_RS16680	PF01053	Cys/Met metabolism PLP-dependent enzyme
BF39_RS16695	PF01022	Bacterial regulatory protein, arsR family
BF39_RS16705	PF00753	Metallo-beta-lactamase superfamily
BF39_RS16710	PF10958	Protein of unknown function (DUF2759)
BF39_RS16715	PF00480	ROK family
BF39_RS16720	PF06014	Bacterial protein of unknown function (DUF910)
BF39_RS16725	PF01812	5-formyltetrahydrofolate cyclo-ligase family
BF39_RS16730	PF00471	Ribosomal protein L33
BF39_RS16740	PF00483	Nucleotidyl transferase
BF39_RS16745	PF01895	PhoU domain
BF39_RS16750	PF00005	ABC transporter
BF39_RS16755	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS16760	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS16765	PF12849	PBP superfamily domain
BF39_RS16770	PF03717	Penicillin-binding Protein dimerisation domain
BF39_RS16770	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS16775	PF07690	Major Facilitator Superfamily
BF39_RS16780	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BF39_RS16780	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BF39_RS16800	PF04551	GcpE protein
BF39_RS16805	PF01475	Ferric uptake regulator family
BF39_RS16810	PF00950	ABC 3 transport family
BF39_RS16815	PF00005	ABC transporter
BF39_RS16820	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF39_RS16820	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS16825	PF11116	Protein of unknown function (DUF2624)
BF39_RS16830	PF01261	Xylose isomerase-like TIM barrel
BF39_RS16835	PF00270	DEAD/DEAH box helicase
BF39_RS16835	PF00271	Helicase conserved C-terminal domain
BF39_RS16845	PF02401	LytB protein
BF39_RS16850	PF01784	NIF3 (NGG1p interacting factor 3)
BF39_RS16855	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
BF39_RS16860	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BF39_RS16865	PF04539	Sigma-70 region 3
BF39_RS16865	PF03979	Sigma-70 factor, region 1.1
BF39_RS16865	PF00140	Sigma-70 factor, region 1.2
BF39_RS16865	PF04545	Sigma-70, region 4
BF39_RS16865	PF04542	Sigma-70 region 2 
BF39_RS16870	PF10410	DnaB-helicase binding domain of primase
BF39_RS16870	PF08275	DNA primase catalytic core, N-terminal domain
BF39_RS16870	PF01807	CHC2 zinc finger
BF39_RS16885	PF03618	Kinase/pyrophosphorylase
BF39_RS16890	PF00571	CBS domain
BF39_RS16890	PF08279	HTH domain
BF39_RS16895	PF02565	Recombination protein O C terminal
BF39_RS16895	PF11967	Recombination protein O N terminal
BF39_RS16905	PF01926	50S ribosome-binding GTPase
BF39_RS16905	PF07650	KH domain
BF39_RS16910	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BF39_RS16915	PF01219	Prokaryotic diacylglycerol kinase
BF39_RS16920	PF02130	Uncharacterized protein family UPF0054
BF39_RS16925	PF01966	HD domain
BF39_RS16925	PF07698	7TM receptor with intracellular HD hydrolase
BF39_RS16925	PF07697	7TM-HD extracellular
BF39_RS16930	PF02562	PhoH-like protein
BF39_RS16935	PF06898	Putative stage IV sporulation protein YqfD
BF39_RS16945	PF07873	YabP family
BF39_RS16950	PF09424	Yqey-like protein
BF39_RS16955	PF01165	Ribosomal protein S21
BF39_RS16960	PF01938	TRAM domain
BF39_RS16960	PF04055	Radical SAM superfamily
BF39_RS16960	PF00919	Uncharacterized protein family UPF0004
BF39_RS16965	PF04452	RNA methyltransferase
BF39_RS16975	PF00684	DnaJ central domain
BF39_RS16975	PF00226	DnaJ domain
BF39_RS16975	PF01556	DnaJ C terminal domain
BF39_RS16980	PF00012	Hsp70 protein
BF39_RS16985	PF01025	GrpE
BF39_RS16990	PF01628	HrcA protein C terminal domain
BF39_RS16995	PF06969	HemN C-terminal domain
BF39_RS16995	PF04055	Radical SAM superfamily
BF39_RS17000	PF01638	HxlR-like helix-turn-helix
BF39_RS17005	PF00679	Elongation factor G C-terminus
BF39_RS17005	PF03144	Elongation factor Tu domain 2
BF39_RS17005	PF06421	GTP-binding protein LepA C-terminus
BF39_RS17005	PF00009	Elongation factor Tu GTP binding domain
BF39_RS17015	PF03418	Germination protease
BF39_RS17020	PF01649	Ribosomal protein S20
BF39_RS17025	PF06144	DNA polymerase III, delta subunit
BF39_RS17030	PF14141	YqzM-like protein
BF39_RS17035	PF00753	Metallo-beta-lactamase superfamily
BF39_RS17035	PF13567	Domain of unknown function (DUF4131)
BF39_RS17035	PF03772	Competence protein
BF39_RS17040	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BF39_RS17045	PF10531	SLBB domain
BF39_RS17050	PF03807	NADP oxidoreductase coenzyme F420-dependent
BF39_RS17050	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BF39_RS17055	PF13649	Methyltransferase domain
BF39_RS17065	PF01966	HD domain
BF39_RS17070	PF01467	Cytidylyltransferase-like
BF39_RS17075	PF01985	CRS1 / YhbY (CRM) domain
BF39_RS17080	PF08501	Shikimate dehydrogenase substrate binding domain
BF39_RS17080	PF01488	Shikimate / quinate 5-dehydrogenase
BF39_RS17080	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
BF39_RS17085	PF01926	50S ribosome-binding GTPase
BF39_RS17100	PF02666	Phosphatidylserine decarboxylase
BF39_RS17105	PF04542	Sigma-70 region 2 
BF39_RS17105	PF04545	Sigma-70, region 4
BF39_RS17115	PF16244	Domain of unknown function (DUF4901)
BF39_RS17120	PF00471	Ribosomal protein L33
BF39_RS17125	PF00881	Nitroreductase family
BF39_RS17130	PF04607	Region found in RelA / SpoT proteins
BF39_RS17140	PF00245	Alkaline phosphatase
BF39_RS17150	PF08386	TAP-like protein
BF39_RS17150	PF00561	alpha/beta hydrolase fold
BF39_RS17185	PF02225	PA domain
BF39_RS17185	PF05922	Peptidase inhibitor I9
BF39_RS17185	PF00082	Subtilase family
BF39_RS17185	PF13860	FlgD Ig-like domain
BF39_RS17190	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
BF39_RS17200	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS17205	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS17210	PF07681	DoxX
BF39_RS17240	PF00005	ABC transporter
BF39_RS17245	PF01032	FecCD transport family
BF39_RS17250	PF01497	Periplasmic binding protein
BF39_RS17255	PF14143	YrhC-like protein
BF39_RS17260	PF00465	Iron-containing alcohol dehydrogenase 
BF39_RS17260	PF00171	Aldehyde dehydrogenase family
BF39_RS17265	PF01053	Cys/Met metabolism PLP-dependent enzyme
BF39_RS17270	PF00291	Pyridoxal-phosphate dependent enzyme
BF39_RS17275	PF01048	Phosphorylase superfamily
BF39_RS17280	PF08241	Methyltransferase domain
BF39_RS17295	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS17295	PF03717	Penicillin-binding Protein dimerisation domain
BF39_RS17300	PF01272	Transcription elongation factor, GreA/GreB, C-term
BF39_RS17300	PF03449	Transcription elongation factor, N-terminal
BF39_RS17305	PF00485	Phosphoribulokinase / Uridine kinase family
BF39_RS17310	PF16325	Peptidase family U32 C-terminal domain
BF39_RS17310	PF01136	Peptidase family U32
BF39_RS17315	PF01136	Peptidase family U32
BF39_RS17320	PF01596	O-methyltransferase
BF39_RS17325	PF02618	YceG-like family
BF39_RS17330	PF06949	Protein of unknown function (DUF1292)
BF39_RS17335	PF03652	Holliday junction resolvase
BF39_RS17340	PF06135	IreB regulatory phosphoprotein
BF39_RS17345	PF01411	tRNA synthetases class II (A)
BF39_RS17345	PF02272	DHHA1 domain
BF39_RS17345	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BF39_RS17355	PF01594	AI-2E family transporter
BF39_RS17375	PF14490	Helix-hairpin-helix containing domain
BF39_RS17375	PF13538	UvrD-like helicase C-terminal domain
BF39_RS17375	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
BF39_RS17390	PF00266	Aminotransferase class-V
BF39_RS17395	PF02082	Transcriptional regulator
BF39_RS17400	PF05496	Holliday junction DNA helicase RuvB P-loop domain
BF39_RS17400	PF12002	MgsA AAA+ ATPase C terminal
BF39_RS17400	PF16193	AAA C-terminal domain
BF39_RS17410	PF00899	ThiF family
BF39_RS17415	PF01336	OB-fold nucleic acid binding domain
BF39_RS17415	PF00152	tRNA synthetases class II (D, K and N) 
BF39_RS17415	PF02938	GAD domain
BF39_RS17420	PF13393	Histidyl-tRNA synthetase
BF39_RS17420	PF03129	Anticodon binding domain
BF39_RS17430	PF02580	D-Tyr-tRNA(Tyr) deacylase
BF39_RS17435	PF13291	ACT domain
BF39_RS17435	PF04607	Region found in RelA / SpoT proteins
BF39_RS17435	PF02824	TGS domain
BF39_RS17440	PF00156	Phosphoribosyl transferase domain
BF39_RS17445	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
BF39_RS17445	PF17768	RecJ OB domain
BF39_RS17445	PF02272	DHHA1 domain
BF39_RS17445	PF01368	DHH family
BF39_RS17450	PF16916	Dimerisation domain of Zinc Transporter
BF39_RS17450	PF01545	Cation efflux family
BF39_RS17455	PF02355	Protein export membrane protein
BF39_RS17455	PF07549	SecD/SecF GG Motif
BF39_RS17460	PF13797	Post-transcriptional regulator
BF39_RS17465	PF01943	Polysaccharide biosynthesis protein
BF39_RS17465	PF14667	Polysaccharide biosynthesis C-terminal domain
BF39_RS17470	PF04239	Protein of unknown function (DUF421)
BF39_RS17480	PF02699	Preprotein translocase subunit
BF39_RS17485	PF01702	Queuine tRNA-ribosyltransferase
BF39_RS17490	PF02547	Queuosine biosynthesis protein
BF39_RS17495	PF11146	Protein of unknown function (DUF2905)
BF39_RS17500	PF05491	RuvB C-terminal winged helix domain
BF39_RS17500	PF05496	Holliday junction DNA helicase RuvB P-loop domain
BF39_RS17500	PF17864	RuvB AAA lid domain
BF39_RS17505	PF01330	RuvA N terminal domain
BF39_RS17505	PF07499	RuvA, C-terminal domain
BF39_RS17510	PF01497	Periplasmic binding protein
BF39_RS17520	PF00892	EamA-like transporter family
BF39_RS17525	PF00892	EamA-like transporter family
BF39_RS17530	PF01022	Bacterial regulatory protein, arsR family
BF39_RS17545	PF01476	LysM domain
BF39_RS17550	PF02445	Quinolinate synthetase A protein
BF39_RS17555	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
BF39_RS17555	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
BF39_RS17560	PF02910	Fumarate reductase flavoprotein C-term
BF39_RS17560	PF00890	FAD binding domain
BF39_RS17565	PF00266	Aminotransferase class-V
BF39_RS17570	PF02829	3H domain
BF39_RS17570	PF08279	HTH domain
BF39_RS17575	PF03475	3-alpha domain
BF39_RS17575	PF03473	MOSC domain
BF39_RS17580	PF00800	Prephenate dehydratase
BF39_RS17580	PF01842	ACT domain
BF39_RS17585	PF02687	FtsX-like permease family
BF39_RS17590	PF02687	FtsX-like permease family
BF39_RS17595	PF00005	ABC transporter
BF39_RS17600	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS17610	PF00072	Response regulator receiver domain
BF39_RS17610	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS17615	PF09269	Domain of unknown function (DUF1967)
BF39_RS17615	PF01926	50S ribosome-binding GTPase
BF39_RS17615	PF01018	GTP1/OBG
BF39_RS17620	PF14682	Sporulation initiation phospho-transferase B, C-terminal
BF39_RS17620	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BF39_RS17625	PF01016	Ribosomal L27 protein
BF39_RS17630	PF04327	Cysteine protease Prp
BF39_RS17635	PF00829	Ribosomal prokaryotic L21 protein
BF39_RS17640	PF00575	S1 RNA binding domain
BF39_RS17640	PF10150	Ribonuclease E/G family
BF39_RS17645	PF02163	Peptidase family M50
BF39_RS17650	PF01551	Peptidase family M23
BF39_RS17655	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BF39_RS17660	PF03775	Septum formation inhibitor MinC, C-terminal domain
BF39_RS17670	PF04085	rod shape-determining protein MreC
BF39_RS17680	PF04002	RadC-like JAB domain
BF39_RS17685	PF02545	Maf-like protein
BF39_RS17695	PF08245	Mur ligase middle domain
BF39_RS17695	PF02875	Mur ligase family, glutamate ligase domain
BF39_RS17700	PF10458	Valyl tRNA synthetase tRNA binding arm
BF39_RS17700	PF00133	tRNA synthetases class I (I, L, M and V)
BF39_RS17700	PF08264	Anticodon-binding domain of tRNA
BF39_RS17710	PF01476	LysM domain
BF39_RS17715	PF00202	Aminotransferase class-III
BF39_RS17720	PF00490	Delta-aminolevulinic acid dehydratase
BF39_RS17725	PF02602	Uroporphyrinogen-III synthase HemD
BF39_RS17730	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
BF39_RS17730	PF03900	Porphobilinogen deaminase, C-terminal domain
BF39_RS17735	PF01578	Cytochrome C assembly protein
BF39_RS17740	PF01488	Shikimate / quinate 5-dehydrogenase
BF39_RS17740	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
BF39_RS17740	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
BF39_RS17745	PF01047	MarR family
BF39_RS17750	PF02566	OsmC-like protein
BF39_RS17755	PF01926	50S ribosome-binding GTPase
BF39_RS17760	PF00004	ATPase family associated with various cellular activities (AAA)
BF39_RS17760	PF05362	Lon protease (S16) C-terminal proteolytic domain
BF39_RS17760	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
BF39_RS17765	PF00004	ATPase family associated with various cellular activities (AAA)
BF39_RS17765	PF05362	Lon protease (S16) C-terminal proteolytic domain
BF39_RS17770	PF07724	AAA domain (Cdc48 subfamily)
BF39_RS17770	PF06689	ClpX C4-type zinc finger
BF39_RS17770	PF10431	C-terminal, D2-small domain, of ClpB protein 
BF39_RS17775	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BF39_RS17775	PF05698	Bacterial trigger factor protein (TF) C-terminus
BF39_RS17775	PF05697	Bacterial trigger factor protein (TF)
BF39_RS17795	PF11724	YvbH-like oligomerisation region
BF39_RS17795	PF08000	Bacterial PH domain
BF39_RS17815	PF12850	Calcineurin-like phosphoesterase superfamily domain
BF39_RS17820	PF01725	Ham1 family
BF39_RS17825	PF03725	3' exoribonuclease family, domain 2
BF39_RS17825	PF01138	3' exoribonuclease family, domain 1
BF39_RS17830	PF10646	Sporulation and spore germination
BF39_RS17835	PF01177	Asp/Glu/Hydantoin racemase
BF39_RS17840	PF07690	Major Facilitator Superfamily
BF39_RS17850	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS17865	PF00196	Bacterial regulatory proteins, luxR family
BF39_RS17870	PF00860	Permease family
BF39_RS17880	PF07969	Amidohydrolase family
BF39_RS17885	PF07969	Amidohydrolase family
BF39_RS17890	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS17895	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS17895	PF12911	N-terminal TM domain of oligopeptide transport permease C
BF39_RS17900	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS17905	PF00005	ABC transporter
BF39_RS17905	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS17910	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS17910	PF00005	ABC transporter
BF39_RS17915	PF07694	5TMR of 5TMR-LYT
BF39_RS17915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS17915	PF06580	Histidine kinase
BF39_RS17920	PF04397	LytTr DNA-binding domain
BF39_RS17920	PF00072	Response regulator receiver domain
BF39_RS17935	PF04024	PspC domain
BF39_RS17940	PF01381	Helix-turn-helix
BF39_RS17940	PF07883	Cupin domain
BF39_RS17945	PF13536	Putative multidrug resistance efflux transporter
BF39_RS17950	PF00230	Major intrinsic protein
BF39_RS17955	PF02082	Transcriptional regulator
BF39_RS17965	PF13732	Domain of unknown function (DUF4162)
BF39_RS17965	PF00005	ABC transporter
BF39_RS17970	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
BF39_RS17980	PF01618	MotA/TolQ/ExbB proton channel family
BF39_RS17985	PF02557	D-alanyl-D-alanine carboxypeptidase
BF39_RS17990	PF03061	Thioesterase superfamily
BF39_RS17995	PF13183	4Fe-4S dicluster domain
BF39_RS17995	PF13085	2Fe-2S iron-sulfur cluster binding domain
BF39_RS18000	PF02910	Fumarate reductase flavoprotein C-term
BF39_RS18000	PF00890	FAD binding domain
BF39_RS18005	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
BF39_RS18010	PF10702	Protein of unknown function (DUF2507)
BF39_RS18015	PF08459	UvrC Helix-hairpin-helix N-terminal
BF39_RS18015	PF01541	GIY-YIG catalytic domain
BF39_RS18015	PF02151	UvrB/uvrC motif
BF39_RS18020	PF00085	Thioredoxin
BF39_RS18025	PF01012	Electron transfer flavoprotein domain
BF39_RS18025	PF00766	Electron transfer flavoprotein FAD-binding domain
BF39_RS18030	PF01012	Electron transfer flavoprotein domain
BF39_RS18035	PF00378	Enoyl-CoA hydratase/isomerase
BF39_RS18040	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS18040	PF08359	YsiA-like protein, C-terminal region
BF39_RS18045	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS18045	PF00501	AMP-binding enzyme
BF39_RS18055	PF01497	Periplasmic binding protein
BF39_RS18060	PF01032	FecCD transport family
BF39_RS18065	PF05163	DinB family
BF39_RS18095	PF00005	ABC transporter
BF39_RS18100	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS18100	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS18105	PF00072	Response regulator receiver domain
BF39_RS18105	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS18115	PF09962	Uncharacterized conserved protein (DUF2196)
BF39_RS18120	PF17785	PUA-like domain
BF39_RS18120	PF10672	S-adenosylmethionine-dependent methyltransferase
BF39_RS18130	PF03992	Antibiotic biosynthesis monooxygenase
BF39_RS18135	PF04203	Sortase domain
BF39_RS18140	PF00005	ABC transporter
BF39_RS18145	PF01032	FecCD transport family
BF39_RS18150	PF01497	Periplasmic binding protein
BF39_RS18155	PF05031	Iron Transport-associated domain 
BF39_RS18165	PF05031	Iron Transport-associated domain 
BF39_RS18170	PF05525	Branched-chain amino acid transport protein
BF39_RS18175	PF01479	S4 domain
BF39_RS18175	PF00849	RNA pseudouridylate synthase
BF39_RS18185	PF01713	Smr domain
BF39_RS18185	PF00488	MutS domain V
BF39_RS18190	PF14791	DNA polymerase beta thumb 
BF39_RS18190	PF02811	PHP domain
BF39_RS18190	PF14716	Helix-hairpin-helix domain
BF39_RS18195	PF02674	Colicin V production protein
BF39_RS18200	PF05164	Cell division protein ZapA
BF39_RS18205	PF01351	Ribonuclease HII
BF39_RS18205	PF11858	Domain of unknown function (DUF3378)
BF39_RS18225	PF01336	OB-fold nucleic acid binding domain
BF39_RS18225	PF00152	tRNA synthetases class II (D, K and N) 
BF39_RS18230	PF03483	B3/4 domain
BF39_RS18230	PF03484	tRNA synthetase B5 domain
BF39_RS18230	PF03147	Ferredoxin-fold anticodon binding domain
BF39_RS18230	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
BF39_RS18230	PF01588	Putative tRNA binding domain
BF39_RS18235	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
BF39_RS18235	PF01409	tRNA synthetases class II core domain (F)
BF39_RS18240	PF00588	SpoU rRNA Methylase family
BF39_RS18240	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BF39_RS18245	PF14098	Small, acid-soluble spore protein I
BF39_RS18250	PF01966	HD domain
BF39_RS18275	PF07690	Major Facilitator Superfamily
BF39_RS18285	PF16859	Tetracyclin repressor-like, C-terminal domain
BF39_RS18285	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS18290	PF05343	M42 glutamyl aminopeptidase
BF39_RS18300	PF00453	Ribosomal protein L20
BF39_RS18305	PF01632	Ribosomal protein L35
BF39_RS18310	PF00707	Translation initiation factor IF-3, C-terminal domain
BF39_RS18310	PF05198	Translation initiation factor IF-3, N-terminal domain
BF39_RS18315	PF03129	Anticodon binding domain
BF39_RS18315	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF39_RS18315	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BF39_RS18315	PF02824	TGS domain
BF39_RS18320	PF08812	YtxC-like family
BF39_RS18325	PF01695	IstB-like ATP binding protein
BF39_RS18325	PF07319	Primosomal protein DnaI N-terminus
BF39_RS18330	PF07261	Replication initiation and membrane attachment
BF39_RS18335	PF03477	ATP cone domain
BF39_RS18340	PF02675	S-adenosylmethionine decarboxylase 
BF39_RS18345	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BF39_RS18345	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BF39_RS18350	PF01121	Dephospho-CoA kinase
BF39_RS18355	PF02659	Putative manganese efflux pump
BF39_RS18360	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
BF39_RS18360	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
BF39_RS18360	PF06827	Zinc finger found in FPG and IleRS
BF39_RS18365	PF01367	5'-3' exonuclease, C-terminal SAM fold
BF39_RS18365	PF00476	DNA polymerase family A
BF39_RS18365	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BF39_RS18370	PF00989	PAS fold
BF39_RS18370	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS18370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS18370	PF16736	Single Cache-like 
BF39_RS18375	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS18375	PF00072	Response regulator receiver domain
BF39_RS18390	PF00056	lactate/malate dehydrogenase, NAD binding domain
BF39_RS18390	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BF39_RS18395	PF00180	Isocitrate/isopropylmalate dehydrogenase
BF39_RS18400	PF00285	Citrate synthase, C-terminal domain
BF39_RS18410	PF04284	Protein of unknown function (DUF441)
BF39_RS18415	PF01594	AI-2E family transporter
BF39_RS18420	PF04186	FxsA cytoplasmic membrane protein 
BF39_RS18425	PF00391	PEP-utilising enzyme, mobile domain
BF39_RS18425	PF02887	Pyruvate kinase, alpha/beta domain
BF39_RS18425	PF00224	Pyruvate kinase, barrel domain
BF39_RS18430	PF00365	Phosphofructokinase
BF39_RS18435	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
BF39_RS18440	PF01039	Carboxyl transferase domain
BF39_RS18440	PF17848	Acetyl-coA carboxylase zinc finger domain
BF39_RS18445	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS18450	PF03949	Malic enzyme, NAD binding domain
BF39_RS18450	PF00390	Malic enzyme, N-terminal domain
BF39_RS18455	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BF39_RS18455	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BF39_RS18455	PF01336	OB-fold nucleic acid binding domain
BF39_RS18455	PF14579	Helix-hairpin-helix motif
BF39_RS18455	PF02811	PHP domain
BF39_RS18460	PF14034	Sporulation protein YtrH
BF39_RS18470	PF01368	DHH family
BF39_RS18470	PF02272	DHHA1 domain
BF39_RS18475	PF14007	YtpI-like protein
BF39_RS18490	PF03061	Thioesterase superfamily
BF39_RS18490	PF07085	DRTGG domain
BF39_RS18490	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS18490	PF00571	CBS domain
BF39_RS18505	PF01321	Creatinase/Prolidase N-terminal domain
BF39_RS18505	PF00557	Metallopeptidase family M24
BF39_RS18510	PF11518	Protein of unknown function (DUF3221)
BF39_RS18540	PF12746	GNAT acetyltransferase
BF39_RS18545	PF07883	Cupin domain
BF39_RS18555	PF01381	Helix-turn-helix
BF39_RS18565	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
BF39_RS18565	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BF39_RS18575	PF00582	Universal stress protein family
BF39_RS18595	PF00206	Lyase
BF39_RS18595	PF14698	Argininosuccinate lyase C-terminal
BF39_RS18600	PF00764	Arginosuccinate synthase
BF39_RS18615	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF39_RS18615	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS18620	PF12787	EcsC protein family
BF39_RS18635	PF00871	Acetokinase family
BF39_RS18640	PF02384	N-6 DNA Methylase
BF39_RS18645	PF08534	Redoxin
BF39_RS18650	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
BF39_RS18660	PF01513	ATP-NAD kinase
BF39_RS18665	PF07969	Amidohydrolase family
BF39_RS18675	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS18675	PF00501	AMP-binding enzyme
BF39_RS18680	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF39_RS18685	PF02926	THUMP domain
BF39_RS18685	PF02568	Thiamine biosynthesis protein (ThiI)
BF39_RS18690	PF00266	Aminotransferase class-V
BF39_RS18695	PF06160	Septation ring formation regulator, EzrA 
BF39_RS18700	PF03466	LysR substrate binding domain
BF39_RS18700	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS18705	PF00892	EamA-like transporter family
BF39_RS18715	PF13185	GAF domain
BF39_RS18720	PF01053	Cys/Met metabolism PLP-dependent enzyme
BF39_RS18725	PF00163	Ribosomal protein S4/S9 N-terminal domain
BF39_RS18725	PF01479	S4 domain
BF39_RS18740	PF00579	tRNA synthetases class I (W and Y)
BF39_RS18740	PF01479	S4 domain
BF39_RS18750	PF04542	Sigma-70 region 2 
BF39_RS18750	PF08281	Sigma-70, region 4
BF39_RS18760	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS18760	PF00501	AMP-binding enzyme
BF39_RS18765	PF00583	Acetyltransferase (GNAT) family
BF39_RS18770	PF00571	CBS domain
BF39_RS18775	PF00850	Histone deacetylase domain
BF39_RS18785	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS18785	PF00072	Response regulator receiver domain
BF39_RS18790	PF13426	PAS domain
BF39_RS18790	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS18790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS18790	PF00672	HAMP domain
BF39_RS18795	PF12796	Ankyrin repeats (3 copies)
BF39_RS18800	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BF39_RS18805	PF01741	Large-conductance mechanosensitive channel, MscL
BF39_RS18830	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS18840	PF07537	CamS sex pheromone cAM373 precursor
BF39_RS18845	PF11009	Protein of unknown function (DUF2847)
BF39_RS18855	PF02073	Thermophilic metalloprotease (M29)
BF39_RS18875	PF13302	Acetyltransferase (GNAT) domain
BF39_RS18880	PF02875	Mur ligase family, glutamate ligase domain
BF39_RS18880	PF01225	Mur ligase family, catalytic domain
BF39_RS18880	PF08245	Mur ligase middle domain
BF39_RS18900	PF14794	Domain of unknown function (DUF4479)
BF39_RS18900	PF01588	Putative tRNA binding domain
BF39_RS18905	PF07285	Protein of unknown function (DUF1444)
BF39_RS18910	PF00085	Thioredoxin
BF39_RS18915	PF01931	Protein of unknown function DUF84
BF39_RS18920	PF05343	M42 glutamyl aminopeptidase
BF39_RS18930	PF00753	Metallo-beta-lactamase superfamily
BF39_RS18935	PF02390	Putative methyltransferase 
BF39_RS18940	PF14165	YtzH-like protein
BF39_RS18945	PF01636	Phosphotransferase enzyme family
BF39_RS18950	PF17999	Pullulanase N1-terminal domain
BF39_RS18950	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BF39_RS18950	PF00128	Alpha amylase, catalytic domain
BF39_RS18960	PF02834	LigT like Phosphoesterase
BF39_RS18965	PF01546	Peptidase family M20/M25/M40
BF39_RS18970	PF01546	Peptidase family M20/M25/M40
BF39_RS18975	PF08220	DeoR-like helix-turn-helix domain
BF39_RS18980	PF00849	RNA pseudouridylate synthase
BF39_RS18980	PF01479	S4 domain
BF39_RS18985	PF14667	Polysaccharide biosynthesis C-terminal domain
BF39_RS18985	PF01943	Polysaccharide biosynthesis protein
BF39_RS18995	PF07690	Major Facilitator Superfamily
BF39_RS19000	PF01022	Bacterial regulatory protein, arsR family
BF39_RS19005	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
BF39_RS19015	PF10957	Sporulation protein Cse60 
BF39_RS19025	PF02559	CarD-like/TRCF domain
BF39_RS19035	PF06800	Sugar transport protein
BF39_RS19050	PF02391	MoaE protein
BF39_RS19055	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
BF39_RS19060	PF03454	MoeA C-terminal region (domain IV)
BF39_RS19060	PF00994	Probable molybdopterin binding domain
BF39_RS19060	PF03453	MoeA N-terminal region (domain I and II)
BF39_RS19065	PF01967	MoaC family
BF39_RS19070	PF00899	ThiF family
BF39_RS19095	PF00581	Rhodanese-like domain
BF39_RS19105	PF00561	alpha/beta hydrolase fold
BF39_RS19110	PF03323	Bacillus/Clostridium GerA spore germination protein
BF39_RS19115	PF03845	Spore germination protein
BF39_RS19145	PF08264	Anticodon-binding domain of tRNA
BF39_RS19145	PF00133	tRNA synthetases class I (I, L, M and V)
BF39_RS19145	PF09334	tRNA synthetases class I (M)
BF39_RS19145	PF13603	Leucyl-tRNA synthetase, Domain 2
BF39_RS19150	PF07690	Major Facilitator Superfamily
BF39_RS19155	PF00999	Sodium/hydrogen exchanger family
BF39_RS19160	PF02080	TrkA-C domain
BF39_RS19165	PF00589	Phage integrase family
BF39_RS19175	PF00005	ABC transporter
BF39_RS19180	PF04235	Protein of unknown function (DUF418)
BF39_RS19180	PF07786	Protein of unknown function (DUF1624)
BF39_RS19190	PF10732	Protein of unknown function (DUF2524)
BF39_RS19195	PF16199	Radical_SAM C-terminal domain
BF39_RS19195	PF04055	Radical SAM superfamily
BF39_RS19200	PF06962	Putative rRNA methylase
BF39_RS19205	PF13732	Domain of unknown function (DUF4162)
BF39_RS19205	PF00005	ABC transporter
BF39_RS19215	PF01177	Asp/Glu/Hydantoin racemase
BF39_RS19230	PF10776	Protein of unknown function (DUF2600)
BF39_RS19235	PF12146	Serine aminopeptidase, S33
BF39_RS19240	PF00132	Bacterial transferase hexapeptide (six repeats)
BF39_RS19245	PF01569	PAP2 superfamily
BF39_RS19250	PF13439	Glycosyltransferase Family 4
BF39_RS19250	PF00534	Glycosyl transferases group 1
BF39_RS19255	PF12804	MobA-like NTP transferase domain
BF39_RS19260	PF00994	Probable molybdopterin binding domain
BF39_RS19275	PF00438	S-adenosylmethionine synthetase, N-terminal domain
BF39_RS19275	PF02772	S-adenosylmethionine synthetase, central domain
BF39_RS19275	PF02773	S-adenosylmethionine synthetase, C-terminal domain
BF39_RS19280	PF01293	Phosphoenolpyruvate carboxykinase
BF39_RS19315	PF01784	NIF3 (NGG1p interacting factor 3)
BF39_RS19320	PF13188	PAS domain
BF39_RS19320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS19320	PF00989	PAS fold
BF39_RS19320	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS19320	PF13426	PAS domain
BF39_RS19325	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS19325	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS19325	PF08447	PAS fold
BF39_RS19325	PF00989	PAS fold
BF39_RS19330	PF00561	alpha/beta hydrolase fold
BF39_RS19330	PF08386	TAP-like protein
BF39_RS19355	PF00005	ABC transporter
BF39_RS19360	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS19385	PF00293	NUDIX domain
BF39_RS19405	PF02664	S-Ribosylhomocysteinase (LuxS)
BF39_RS19410	PF01809	Putative membrane protein insertion efficiency factor
BF39_RS19415	PF00484	Carbonic anhydrase
BF39_RS19420	PF01654	Cytochrome bd terminal oxidase subunit I
BF39_RS19425	PF02322	Cytochrome bd terminal oxidase subunit II
BF39_RS19430	PF10676	Spore germination protein gerPA/gerPF
BF39_RS19445	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF39_RS19445	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS19470	PF04012	PspA/IM30 family
BF39_RS19490	PF07670	Nucleoside recognition
BF39_RS19490	PF02421	Ferrous iron transport protein B
BF39_RS19490	PF17910	FeoB cytosolic helical domain
BF39_RS19490	PF07664	Ferrous iron transport protein B C terminus
BF39_RS19500	PF09515	Thiamine transporter protein (Thia_YuaJ)
BF39_RS19505	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS19505	PF00672	HAMP domain
BF39_RS19505	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS19510	PF00072	Response regulator receiver domain
BF39_RS19510	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS19535	PF00156	Phosphoribosyl transferase domain
BF39_RS19540	PF00781	Diacylglycerol kinase catalytic domain
BF39_RS19560	PF00248	Aldo/keto reductase family
BF39_RS19575	PF09335	SNARE associated Golgi protein
BF39_RS19580	PF00398	Ribosomal RNA adenine dimethylase
BF39_RS19585	PF02687	FtsX-like permease family
BF39_RS19590	PF00005	ABC transporter
BF39_RS19595	PF12833	Helix-turn-helix domain
BF39_RS19595	PF06445	GyrI-like small molecule binding domain
BF39_RS19600	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS19600	PF00072	Response regulator receiver domain
BF39_RS19605	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS19610	PF02687	FtsX-like permease family
BF39_RS19615	PF02687	FtsX-like permease family
BF39_RS19620	PF02687	FtsX-like permease family
BF39_RS19625	PF00005	ABC transporter
BF39_RS19640	PF02447	GntP family permease
BF39_RS19645	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS19645	PF07702	UTRA domain
BF39_RS19655	PF07071	KDGP aldolase
BF39_RS19660	PF03841	L-seryl-tRNA selenium transferase
BF39_RS19665	PF01979	Amidohydrolase family
BF39_RS19680	PF02557	D-alanyl-D-alanine carboxypeptidase
BF39_RS19685	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS19685	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS19690	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS19690	PF00072	Response regulator receiver domain
BF39_RS19695	PF13378	Enolase C-terminal domain-like
BF39_RS19695	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BF39_RS19700	PF00501	AMP-binding enzyme
BF39_RS19700	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS19705	PF00378	Enoyl-CoA hydratase/isomerase
BF39_RS19710	PF00561	alpha/beta hydrolase fold
BF39_RS19715	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF39_RS19715	PF16582	Middle domain of thiamine pyrophosphate
BF39_RS19715	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF39_RS19720	PF00425	chorismate binding enzyme
BF39_RS19725	PF01040	UbiA prenyltransferase family
BF39_RS19730	PF01258	Prokaryotic dksA/traR C4-type zinc finger
BF39_RS19735	PF00313	'Cold-shock' DNA-binding domain
BF39_RS19755	PF00343	Carbohydrate phosphorylase
BF39_RS19760	PF00534	Glycosyl transferases group 1
BF39_RS19760	PF08323	Starch synthase catalytic domain
BF39_RS19765	PF00483	Nucleotidyl transferase
BF39_RS19770	PF00483	Nucleotidyl transferase
BF39_RS19780	PF00056	lactate/malate dehydrogenase, NAD binding domain
BF39_RS19780	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BF39_RS19875	PF05698	Bacterial trigger factor protein (TF) C-terminus
BF39_RS19875	PF05697	Bacterial trigger factor protein (TF)
BF39_RS19910	PF02308	MgtC family
BF39_RS19915	PF07885	Ion channel
BF39_RS19915	PF02254	TrkA-N domain
BF39_RS19920	PF08868	YugN-like family
BF39_RS19925	PF00342	Phosphoglucose isomerase
BF39_RS19935	PF04070	Domain of unknown function (DUF378)
BF39_RS19940	PF00575	S1 RNA binding domain
BF39_RS19945	PF00155	Aminotransferase class I and II
BF39_RS19950	PF01037	Lrp/AsnC ligand binding domain
BF39_RS19955	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BF39_RS19955	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BF39_RS19960	PF00561	alpha/beta hydrolase fold
BF39_RS19960	PF08386	TAP-like protein
BF39_RS19970	PF00155	Aminotransferase class I and II
BF39_RS19985	PF08810	Kinase associated protein B
BF39_RS19990	PF00929	Exonuclease
BF39_RS19995	PF03600	Citrate transporter
BF39_RS20010	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF39_RS20010	PF03129	Anticodon binding domain
BF39_RS20015	PF03061	Thioesterase superfamily
BF39_RS20025	PF02632	BioY family
BF39_RS20035	PF00483	Nucleotidyl transferase
BF39_RS20040	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BF39_RS20040	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BF39_RS20040	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BF39_RS20040	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BF39_RS20045	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BF39_RS20045	PF10372	Bacterial membrane-spanning protein N-terminus
BF39_RS20050	PF00883	Cytosol aminopeptidase family, catalytic domain
BF39_RS20050	PF02789	Cytosol aminopeptidase family, N-terminal domain
BF39_RS20055	PF06725	3D domain
BF39_RS20065	PF13344	Haloacid dehalogenase-like hydrolase
BF39_RS20065	PF00293	NUDIX domain
BF39_RS20070	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS20075	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS20085	PF06445	GyrI-like small molecule binding domain
BF39_RS20100	PF04463	Protein of unknown function (DUF523)
BF39_RS20120	PF01521	Iron-sulphur cluster biosynthesis
BF39_RS20125	PF01678	Diaminopimelate epimerase
BF39_RS20130	PF07293	Protein of unknown function (DUF1450)
BF39_RS20135	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS20145	PF09383	NIL domain
BF39_RS20145	PF00005	ABC transporter
BF39_RS20150	PF03649	Uncharacterised protein family (UPF0014)
BF39_RS20155	PF08274	PhnA Zinc-Ribbon 
BF39_RS20155	PF03831	PhnA domain
BF39_RS20190	PF01909	Nucleotidyltransferase domain
BF39_RS20190	PF13427	Domain of unknown function (DUF4111)
BF39_RS20195	PF07315	Protein of unknown function (DUF1462)
BF39_RS20200	PF01106	NifU-like domain
BF39_RS20215	PF04608	Phosphatidylglycerophosphatase A
BF39_RS20230	PF02525	Flavodoxin-like fold
BF39_RS20235	PF13344	Haloacid dehalogenase-like hydrolase
BF39_RS20245	PF01934	Protein of unknown function DUF86
BF39_RS20250	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
BF39_RS20270	PF06265	Protein of unknown function (DUF1027)
BF39_RS20275	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
BF39_RS20280	PF07739	TipAS antibiotic-recognition domain
BF39_RS20280	PF13411	MerR HTH family regulatory protein
BF39_RS20285	PF10086	YhfC intramembrane metalloprotease
BF39_RS20305	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
BF39_RS20305	PF04055	Radical SAM superfamily
BF39_RS20310	PF01551	Peptidase family M23
BF39_RS20320	PF08827	Domain of unknown function (DUF1805)
BF39_RS20325	PF02872	5'-nucleotidase, C-terminal domain
BF39_RS20335	PF03551	Transcriptional regulator PadR-like family
BF39_RS20340	PF04892	VanZ like family 
BF39_RS20350	PF01458	Uncharacterized protein family (UPF0051)
BF39_RS20355	PF01592	NifU-like N terminal domain
BF39_RS20360	PF00266	Aminotransferase class-V
BF39_RS20365	PF01458	Uncharacterized protein family (UPF0051)
BF39_RS20370	PF00005	ABC transporter
BF39_RS20375	PF03180	NLPA lipoprotein
BF39_RS20380	PF03180	NLPA lipoprotein
BF39_RS20385	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS20390	PF00005	ABC transporter
BF39_RS20390	PF09383	NIL domain
BF39_RS20405	PF00085	Thioredoxin
BF39_RS20410	PF01751	Toprim domain
BF39_RS20415	PF01597	Glycine cleavage H-protein
BF39_RS20420	PF03960	ArsC family
BF39_RS20470	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BF39_RS20470	PF00056	lactate/malate dehydrogenase, NAD binding domain
BF39_RS20495	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS20495	PF13305	Tetracyclin repressor-like, C-terminal domain
BF39_RS20500	PF00753	Metallo-beta-lactamase superfamily
BF39_RS20505	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BF39_RS20505	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF39_RS20505	PF02770	Acyl-CoA dehydrogenase, middle domain
BF39_RS20515	PF02803	Thiolase, C-terminal domain
BF39_RS20515	PF00108	Thiolase, N-terminal domain
BF39_RS20520	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BF39_RS20520	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BF39_RS20520	PF00378	Enoyl-CoA hydratase/isomerase
BF39_RS20525	PF14115	YuzL-like protein
BF39_RS20530	PF07943	Penicillin-binding protein 5, C-terminal domain
BF39_RS20530	PF00768	D-alanyl-D-alanine carboxypeptidase
BF39_RS20535	PF01619	Proline dehydrogenase
BF39_RS20540	PF10835	Protein of unknown function (DUF2573)
BF39_RS20545	PF01910	Thiamine-binding protein
BF39_RS20550	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS20550	PF02743	Cache domain
BF39_RS20550	PF00672	HAMP domain
BF39_RS20570	PF07690	Major Facilitator Superfamily
BF39_RS20575	PF13520	Amino acid permease
BF39_RS20585	PF02096	60Kd inner membrane protein
BF39_RS20595	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF39_RS20595	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS20630	PF09335	SNARE associated Golgi protein
BF39_RS20640	PF03734	L,D-transpeptidase catalytic domain
BF39_RS20640	PF17969	L,D-transpeptidase C-terminal domain
BF39_RS20645	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS20645	PF00072	Response regulator receiver domain
BF39_RS20650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS20650	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS20650	PF00989	PAS fold
BF39_RS20650	PF16736	Single Cache-like 
BF39_RS20660	PF08264	Anticodon-binding domain of tRNA
BF39_RS20660	PF09334	tRNA synthetases class I (M)
BF39_RS20670	PF02743	Cache domain
BF39_RS20670	PF00672	HAMP domain
BF39_RS20670	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS20675	PF01883	Iron-sulfur cluster assembly protein
BF39_RS20680	PF02868	Thermolysin metallopeptidase, alpha-helical domain
BF39_RS20680	PF01447	Thermolysin metallopeptidase, catalytic domain
BF39_RS20680	PF03413	Peptidase propeptide and YPEB domain
BF39_RS20680	PF07504	Fungalysin/Thermolysin Propeptide Motif
BF39_RS20685	PF02678	Pirin
BF39_RS20685	PF17954	Quercetinase C-terminal cupin domain
BF39_RS20690	PF01047	MarR family
BF39_RS20700	PF00999	Sodium/hydrogen exchanger family
BF39_RS20705	PF02080	TrkA-C domain
BF39_RS20715	PF01235	Sodium:alanine symporter family
BF39_RS20720	PF00210	Ferritin-like domain
BF39_RS20735	PF03641	Possible lysine decarboxylase
BF39_RS20745	PF00210	Ferritin-like domain
BF39_RS20750	PF04235	Protein of unknown function (DUF418)
BF39_RS20760	PF01773	Na+ dependent nucleoside transporter N-terminus
BF39_RS20760	PF07662	Na+ dependent nucleoside transporter C-terminus
BF39_RS20765	PF07662	Na+ dependent nucleoside transporter C-terminus
BF39_RS20765	PF01773	Na+ dependent nucleoside transporter N-terminus
BF39_RS20770	PF01235	Sodium:alanine symporter family
BF39_RS20775	PF01235	Sodium:alanine symporter family
BF39_RS20780	PF13460	NAD(P)H-binding 
BF39_RS20795	PF00248	Aldo/keto reductase family
BF39_RS20800	PF07690	Major Facilitator Superfamily
BF39_RS20805	PF01638	HxlR-like helix-turn-helix
BF39_RS20810	PF07849	Protein of unknown function (DUF1641)
BF39_RS20815	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS20820	PF01479	S4 domain
BF39_RS20820	PF00579	tRNA synthetases class I (W and Y)
BF39_RS20825	PF01565	FAD binding domain 
BF39_RS20825	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
BF39_RS20835	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS20835	PF17202	Single cache domain 3
BF39_RS20835	PF00672	HAMP domain
BF39_RS20845	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
BF39_RS20850	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
BF39_RS20865	PF13302	Acetyltransferase (GNAT) domain
BF39_RS20870	PF06146	Phosphate-starvation-inducible E
BF39_RS20885	PF00005	ABC transporter
BF39_RS20890	PF01032	FecCD transport family
BF39_RS20895	PF01032	FecCD transport family
BF39_RS20905	PF00072	Response regulator receiver domain
BF39_RS20905	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS20910	PF01668	SmpB protein
BF39_RS20915	PF17876	Cold shock domain
BF39_RS20915	PF08206	Ribonuclease B OB domain
BF39_RS20915	PF00773	RNB domain
BF39_RS20915	PF00575	S1 RNA binding domain
BF39_RS20920	PF12146	Serine aminopeptidase, S33
BF39_RS20925	PF03840	Preprotein translocase SecG subunit
BF39_RS20930	PF04172	LrgB-like family 
BF39_RS20935	PF03788	LrgA family
BF39_RS20940	PF01156	Inosine-uridine preferring nucleoside hydrolase
BF39_RS21030	PF04860	Phage portal protein
BF39_RS21055	PF00589	Phage integrase family
BF39_RS21055	PF02899	Phage integrase, N-terminal SAM-like domain
BF39_RS21060	PF03952	Enolase, N-terminal domain
BF39_RS21060	PF00113	Enolase, C-terminal TIM barrel domain
BF39_RS21065	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
BF39_RS21065	PF01676	Metalloenzyme superfamily
BF39_RS21070	PF00121	Triosephosphate isomerase
BF39_RS21075	PF00162	Phosphoglycerate kinase
BF39_RS21080	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BF39_RS21080	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BF39_RS21085	PF04198	Putative sugar-binding domain
BF39_RS21095	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
BF39_RS21095	PF04552	Sigma-54, DNA binding domain
BF39_RS21095	PF04963	Sigma-54 factor, core binding domain
BF39_RS21115	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BF39_RS21120	PF07451	Stage V sporulation protein AD (SpoVAD)
BF39_RS21125	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BF39_RS21135	PF04239	Protein of unknown function (DUF421)
BF39_RS21140	PF00574	Clp protease
BF39_RS21145	PF00381	PTS HPr component phosphorylation site
BF39_RS21150	PF10298	WhiA N-terminal LAGLIDADG-like domain
BF39_RS21150	PF14527	WhiA LAGLIDADG-like domain
BF39_RS21150	PF02650	WhiA C-terminal HTH domain
BF39_RS21155	PF01933	Uncharacterised protein family UPF0052
BF39_RS21160	PF03668	P-loop ATPase protein family
BF39_RS21165	PF00293	NUDIX domain
BF39_RS21175	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS21185	PF14602	Hexapeptide repeat of succinyl-transferase
BF39_RS21190	PF13419	Haloacid dehalogenase-like hydrolase
BF39_RS21195	PF01790	Prolipoprotein diacylglyceryl transferase
BF39_RS21200	PF07475	HPr Serine kinase C-terminal domain
BF39_RS21200	PF02603	HPr Serine kinase N terminus
BF39_RS21205	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
BF39_RS21215	PF17760	UvrA interaction domain
BF39_RS21215	PF00005	ABC transporter
BF39_RS21215	PF17755	UvrA DNA-binding domain
BF39_RS21220	PF00271	Helicase conserved C-terminal domain
BF39_RS21220	PF04851	Type III restriction enzyme, res subunit
BF39_RS21220	PF02151	UvrB/uvrC motif
BF39_RS21220	PF17757	UvrB interaction domain
BF39_RS21220	PF12344	Ultra-violet resistance protein B
BF39_RS21225	PF07282	Putative transposase DNA-binding domain
BF39_RS21225	PF01385	Probable transposase
BF39_RS21225	PF12323	Helix-turn-helix domain
BF39_RS21240	PF07739	TipAS antibiotic-recognition domain
BF39_RS21240	PF13411	MerR HTH family regulatory protein
BF39_RS21265	PF03601	Conserved hypothetical protein 698
BF39_RS21270	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS21270	PF03466	LysR substrate binding domain
BF39_RS21275	PF13411	MerR HTH family regulatory protein
BF39_RS21280	PF03358	NADPH-dependent FMN reductase
BF39_RS21285	PF00005	ABC transporter
BF39_RS21285	PF12848	ABC transporter
BF39_RS21290	PF01906	Putative heavy-metal-binding
BF39_RS21295	PF00664	ABC transporter transmembrane region
BF39_RS21295	PF00005	ABC transporter
BF39_RS21300	PF17820	PDZ domain
BF39_RS21305	PF01471	Putative peptidoglycan binding domain
BF39_RS21305	PF03572	Peptidase family S41
BF39_RS21305	PF17820	PDZ domain
BF39_RS21310	PF02687	FtsX-like permease family
BF39_RS21310	PF18075	FtsX extracellular domain
BF39_RS21315	PF00005	ABC transporter
BF39_RS21320	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BF39_RS21330	PF03462	PCRF domain
BF39_RS21330	PF00472	RF-1 domain
BF39_RS21335	PF01043	SecA preprotein cross-linking domain
BF39_RS21335	PF07516	SecA Wing and Scaffold domain
BF39_RS21335	PF07517	SecA DEAD-like domain
BF39_RS21335	PF02810	SEC-C motif
BF39_RS21340	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
BF39_RS21340	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
BF39_RS21345	PF00313	'Cold-shock' DNA-binding domain
BF39_RS21355	PF04851	Type III restriction enzyme, res subunit
BF39_RS21355	PF00271	Helicase conserved C-terminal domain
BF39_RS21360	PF01476	LysM domain
BF39_RS21360	PF00877	NlpC/P60 family
BF39_RS21365	PF01638	HxlR-like helix-turn-helix
BF39_RS21375	PF02645	Uncharacterised protein, DegV family COG1307
BF39_RS21380	PF01205	Uncharacterized protein family UPF0029
BF39_RS21380	PF09186	Domain of unknown function (DUF1949)
BF39_RS21385	PF03816	Cell envelope-related transcriptional attenuator domain
BF39_RS21390	PF02350	UDP-N-acetylglucosamine 2-epimerase
BF39_RS21395	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BF39_RS21395	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BF39_RS21395	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BF39_RS21400	PF00953	Glycosyl transferase family 4
BF39_RS21405	PF01522	Polysaccharide deacetylase
BF39_RS21410	PF00874	PRD domain
BF39_RS21410	PF00158	Sigma-54 interaction domain
BF39_RS21410	PF03610	PTS system fructose IIA component
BF39_RS21420	PF02417	Chromate transporter
BF39_RS21425	PF04794	YdjC-like protein
BF39_RS21430	PF02056	Family 4 glycosyl hydrolase
BF39_RS21430	PF11975	Family 4 glycosyl hydrolase C-terminal domain
BF39_RS21435	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BF39_RS21440	PF02378	Phosphotransferase system, EIIC 
BF39_RS21445	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BF39_RS21455	PF02675	S-adenosylmethionine decarboxylase 
BF39_RS21460	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BF39_RS21465	PF02378	Phosphotransferase system, EIIC 
BF39_RS21470	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BF39_RS21475	PF00375	Sodium:dicarboxylate symporter family
BF39_RS21485	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS21495	PF03466	LysR substrate binding domain
BF39_RS21495	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS21515	PF01654	Cytochrome bd terminal oxidase subunit I
BF39_RS21520	PF02322	Cytochrome bd terminal oxidase subunit II
BF39_RS21525	PF02040	Arsenical pump membrane protein
BF39_RS21530	PF01964	Radical SAM ThiC family
BF39_RS21530	PF13667	ThiC-associated domain 
BF39_RS21545	PF09988	Uncharacterized metal-binding protein (DUF2227)
BF39_RS21555	PF00884	Sulfatase
BF39_RS21560	PF01063	Amino-transferase class IV
BF39_RS21570	PF07662	Na+ dependent nucleoside transporter C-terminus
BF39_RS21570	PF01773	Na+ dependent nucleoside transporter N-terminus
BF39_RS21590	PF02028	BCCT, betaine/carnitine/choline family transporter
BF39_RS21595	PF06725	3D domain
BF39_RS21595	PF01476	LysM domain
BF39_RS21620	PF04434	SWIM zinc finger
BF39_RS21625	PF00176	SNF2 family N-terminal domain
BF39_RS21625	PF12419	SNF2 Helicase protein 
BF39_RS21625	PF00271	Helicase conserved C-terminal domain
BF39_RS21655	PF04542	Sigma-70 region 2 
BF39_RS21655	PF04545	Sigma-70, region 4
BF39_RS21660	PF04893	Yip1 domain
BF39_RS21665	PF02687	FtsX-like permease family
BF39_RS21665	PF12704	MacB-like periplasmic core domain
BF39_RS21670	PF00005	ABC transporter
BF39_RS21690	PF07690	Major Facilitator Superfamily
BF39_RS21705	PF16736	Single Cache-like 
BF39_RS21705	PF00989	PAS fold
BF39_RS21705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS21705	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS21710	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS21710	PF00072	Response regulator receiver domain
BF39_RS21715	PF16363	GDP-mannose 4,6 dehydratase
BF39_RS21720	PF03816	Cell envelope-related transcriptional attenuator domain
BF39_RS21730	PF07977	FabA-like domain
BF39_RS21735	PF02350	UDP-N-acetylglucosamine 2-epimerase
BF39_RS21740	PF00005	ABC transporter
BF39_RS21740	PF08239	Bacterial SH3 domain
BF39_RS21745	PF01061	ABC-2 type transporter
BF39_RS21750	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BF39_RS21750	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BF39_RS21750	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BF39_RS21795	PF12116	Stage III sporulation protein D
BF39_RS21810	PF01551	Peptidase family M23
BF39_RS21820	PF00005	ABC transporter
BF39_RS21825	PF04397	LytTr DNA-binding domain
BF39_RS21825	PF00072	Response regulator receiver domain
BF39_RS21830	PF00005	ABC transporter
BF39_RS21835	PF08486	Stage II sporulation protein
BF39_RS21840	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BF39_RS21850	PF06612	Protein of unknown function (DUF1146)
BF39_RS21855	PF00361	Proton-conducting membrane transporter
BF39_RS21860	PF00361	Proton-conducting membrane transporter
BF39_RS21865	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
BF39_RS21865	PF00361	Proton-conducting membrane transporter
BF39_RS21865	PF01010	NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
BF39_RS21870	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
BF39_RS21875	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
BF39_RS21885	PF00146	NADH dehydrogenase
BF39_RS21890	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
BF39_RS21895	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
BF39_RS21900	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
BF39_RS21905	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
BF39_RS21910	PF00563	EAL domain
BF39_RS21910	PF00990	Diguanylate cyclase, GGDEF domain
BF39_RS21910	PF03707	Bacterial signalling protein N terminal repeat
BF39_RS21925	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
BF39_RS21925	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
BF39_RS21930	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BF39_RS21930	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BF39_RS21935	PF00231	ATP synthase
BF39_RS21940	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BF39_RS21940	PF00306	ATP synthase alpha/beta chain, C terminal domain
BF39_RS21940	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BF39_RS21945	PF00213	ATP synthase delta (OSCP) subunit
BF39_RS21950	PF00430	ATP synthase B/B' CF(0)
BF39_RS21955	PF00137	ATP synthase subunit C
BF39_RS21960	PF00119	ATP synthase A chain
BF39_RS21965	PF03899	ATP synthase I chain
BF39_RS21985	PF00464	Serine hydroxymethyltransferase
BF39_RS21990	PF04260	Protein of unknown function (DUF436) 
BF39_RS21995	PF02502	Ribose/Galactose Isomerase
BF39_RS22000	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BF39_RS22005	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BF39_RS22010	PF07681	DoxX
BF39_RS22015	PF01613	Flavin reductase like domain
BF39_RS22025	PF02659	Putative manganese efflux pump
BF39_RS22030	PF03481	Putative GTP-binding controlling metal-binding
BF39_RS22030	PF01300	Telomere recombination
BF39_RS22040	PF09551	Stage II sporulation protein R (spore_II_R)
BF39_RS22045	PF13847	Methyltransferase domain
BF39_RS22045	PF17827	PrmC N-terminal domain
BF39_RS22050	PF00472	RF-1 domain
BF39_RS22050	PF03462	PCRF domain
BF39_RS22055	PF00265	Thymidine kinase
BF39_RS22060	PF01197	Ribosomal protein L31
BF39_RS22065	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BF39_RS22065	PF07498	Rho termination factor, N-terminal domain
BF39_RS22065	PF07497	Rho termination factor, RNA-binding domain
BF39_RS22070	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
BF39_RS22075	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BF39_RS22080	PF01116	Fructose-bisphosphate aldolase class-II
BF39_RS22085	PF00072	Response regulator receiver domain
BF39_RS22090	PF10740	Domain of unknown function (DUF2529)
BF39_RS22095	PF06418	CTP synthase N-terminus
BF39_RS22095	PF00117	Glutamine amidotransferase class-I
BF39_RS22100	PF05066	HB1, ASXL, restriction endonuclease HTH domain
BF39_RS22110	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF39_RS22110	PF02770	Acyl-CoA dehydrogenase, middle domain
BF39_RS22110	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BF39_RS22115	PF02770	Acyl-CoA dehydrogenase, middle domain
BF39_RS22115	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BF39_RS22115	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF39_RS22120	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BF39_RS22120	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BF39_RS22125	PF00108	Thiolase, N-terminal domain
BF39_RS22125	PF02803	Thiolase, C-terminal domain
BF39_RS22130	PF13183	4Fe-4S dicluster domain
BF39_RS22130	PF02754	Cysteine-rich domain
BF39_RS22135	PF13091	PLD-like domain
BF39_RS22140	PF03851	UV-endonuclease UvdE
BF39_RS22145	PF00990	Diguanylate cyclase, GGDEF domain
BF39_RS22145	PF00563	EAL domain
BF39_RS22145	PF03707	Bacterial signalling protein N terminal repeat
BF39_RS22160	PF00072	Response regulator receiver domain
BF39_RS22160	PF00196	Bacterial regulatory proteins, luxR family
BF39_RS22165	PF07730	Histidine kinase
BF39_RS22165	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS22175	PF00005	ABC transporter
BF39_RS22180	PF00557	Metallopeptidase family M24
BF39_RS22195	PF01473	Putative cell wall binding repeat
BF39_RS22195	PF02324	Glycosyl hydrolase family 70
BF39_RS22200	PF04389	Peptidase family M28
BF39_RS22200	PF02225	PA domain
BF39_RS22220	PF08281	Sigma-70, region 4
BF39_RS22220	PF04542	Sigma-70 region 2 
BF39_RS22225	PF03485	Arginyl tRNA synthetase N terminal domain
BF39_RS22225	PF00750	tRNA synthetases class I (R)
BF39_RS22225	PF05746	DALR anticodon binding domain
BF39_RS22230	PF09148	Domain of unknown function (DUF1934)
BF39_RS22235	PF17676	LD-carboxypeptidase C-terminal domain
BF39_RS22235	PF02016	LD-carboxypeptidase N-terminal domain
BF39_RS22255	PF00491	Arginase family
BF39_RS22260	PF17284	Spermidine synthase tetramerisation domain
BF39_RS22265	PF07690	Major Facilitator Superfamily
BF39_RS22270	PF13411	MerR HTH family regulatory protein
BF39_RS22275	PF03009	Glycerophosphoryl diester phosphodiesterase family
BF39_RS22280	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS22280	PF00912	Transglycosylase
BF39_RS22285	PF08741	YwhD family
BF39_RS22290	PF02163	Peptidase family M50
BF39_RS22295	PF01361	Tautomerase enzyme
BF39_RS22300	PF01966	HD domain
BF39_RS22305	PF01497	Periplasmic binding protein
BF39_RS22310	PF00005	ABC transporter
BF39_RS22315	PF01032	FecCD transport family
BF39_RS22320	PF01032	FecCD transport family
BF39_RS22325	PF01032	FecCD transport family
BF39_RS22330	PF07293	Protein of unknown function (DUF1450)
BF39_RS22345	PF03099	Biotin/lipoate A/B protein ligase family
BF39_RS22350	PF01515	Phosphate acetyl/butaryl transferase
BF39_RS22355	PF06778	Chlorite dismutase
BF39_RS22360	PF00768	D-alanyl-D-alanine carboxypeptidase
BF39_RS22360	PF07943	Penicillin-binding protein 5, C-terminal domain
BF39_RS22365	PF07486	Cell Wall Hydrolase
BF39_RS22370	PF09671	Spore coat protein (Spore_GerQ)
BF39_RS22375	PF04241	Protein of unknown function (DUF423)
BF39_RS22385	PF07885	Ion channel
BF39_RS22385	PF02254	TrkA-N domain
BF39_RS22390	PF00860	Permease family
BF39_RS22400	PF12823	Domain of unknown function (DUF3817)
BF39_RS22405	PF03167	Uracil DNA glycosylase superfamily
BF39_RS22410	PF12679	ABC-2 family transporter protein
BF39_RS22415	PF00005	ABC transporter
BF39_RS22420	PF13472	GDSL-like Lipase/Acylhydrolase family
BF39_RS22425	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BF39_RS22425	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS22435	PF03447	Homoserine dehydrogenase, NAD binding domain
BF39_RS22435	PF00742	Homoserine dehydrogenase
BF39_RS22435	PF01842	ACT domain
BF39_RS22440	PF04204	Homoserine O-succinyltransferase 
BF39_RS22445	PF01053	Cys/Met metabolism PLP-dependent enzyme
BF39_RS22455	PF13419	Haloacid dehalogenase-like hydrolase
BF39_RS22460	PF00027	Cyclic nucleotide-binding domain
BF39_RS22465	PF02525	Flavodoxin-like fold
BF39_RS22470	PF00072	Response regulator receiver domain
BF39_RS22470	PF00196	Bacterial regulatory proteins, luxR family
BF39_RS22480	PF08543	Phosphomethylpyrimidine kinase
BF39_RS22485	PF00990	Diguanylate cyclase, GGDEF domain
BF39_RS22485	PF07694	5TMR of 5TMR-LYT
BF39_RS22490	PF04328	Selenoprotein, putative 
BF39_RS22495	PF13722	5TM C-terminal transporter carbon starvation CstA
BF39_RS22495	PF02554	Carbon starvation protein CstA
BF39_RS22500	PF00072	Response regulator receiver domain
BF39_RS22500	PF04397	LytTr DNA-binding domain
BF39_RS22505	PF07690	Major Facilitator Superfamily
BF39_RS22510	PF03808	Glycosyl transferase WecB/TagA/CpsF family
BF39_RS22525	PF03458	UPF0126 domain
BF39_RS22530	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS22540	PF03061	Thioesterase superfamily
BF39_RS22550	PF00535	Glycosyl transferase family 2
BF39_RS22555	PF12848	ABC transporter
BF39_RS22555	PF00005	ABC transporter
BF39_RS22580	PF00535	Glycosyl transferase family 2
BF39_RS22585	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS22590	PF00873	AcrB/AcrD/AcrF family
BF39_RS22595	PF01625	Peptide methionine sulfoxide reductase
BF39_RS22595	PF01641	SelR domain
BF39_RS22600	PF01594	AI-2E family transporter
BF39_RS22605	PF04172	LrgB-like family 
BF39_RS22610	PF03788	LrgA family
BF39_RS22615	PF04397	LytTr DNA-binding domain
BF39_RS22615	PF00072	Response regulator receiver domain
BF39_RS22620	PF13492	GAF domain
BF39_RS22620	PF06580	Histidine kinase
BF39_RS22620	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS22620	PF07694	5TMR of 5TMR-LYT
BF39_RS22625	PF07690	Major Facilitator Superfamily
BF39_RS22630	PF02028	BCCT, betaine/carnitine/choline family transporter
BF39_RS22635	PF02898	Nitric oxide synthase, oxygenase domain
BF39_RS22640	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BF39_RS22640	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BF39_RS22650	PF02293	AmiS/UreI family transporter
BF39_RS22660	PF16363	GDP-mannose 4,6 dehydratase
BF39_RS22665	PF03006	Haemolysin-III related
BF39_RS22675	PF03880	DbpA RNA binding domain   
BF39_RS22675	PF00270	DEAD/DEAH box helicase
BF39_RS22675	PF00271	Helicase conserved C-terminal domain
BF39_RS22685	PF00478	IMP dehydrogenase / GMP reductase domain
BF39_RS22690	PF08439	Oligopeptidase F
BF39_RS22690	PF01432	Peptidase family M3
BF39_RS22700	PF02590	Predicted SPOUT methyltransferase
BF39_RS22710	PF13180	PDZ domain
BF39_RS22715	PF00753	Metallo-beta-lactamase superfamily
BF39_RS22720	PF09648	YycH protein
BF39_RS22725	PF07435	YycH protein
BF39_RS22730	PF13426	PAS domain
BF39_RS22730	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS22730	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS22730	PF00672	HAMP domain
BF39_RS22735	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS22735	PF00072	Response regulator receiver domain
BF39_RS22760	PF00709	Adenylosuccinate synthetase
BF39_RS22765	PF00772	DnaB-like helicase N terminal domain
BF39_RS22765	PF03796	DnaB-like helicase C terminal domain
BF39_RS22770	PF01281	Ribosomal protein L9, N-terminal domain
BF39_RS22770	PF03948	Ribosomal protein L9, C-terminal domain
BF39_RS22775	PF02272	DHHA1 domain
BF39_RS22775	PF01368	DHH family
BF39_RS22780	PF09991	Predicted membrane protein (DUF2232)
BF39_RS22785	PF01084	Ribosomal protein S18
BF39_RS22790	PF00436	Single-strand binding protein family
BF39_RS22795	PF01250	Ribosomal protein S6
BF39_RS22800	PF01926	50S ribosome-binding GTPase
BF39_RS22800	PF06071	Protein of unknown function (DUF933)
BF39_RS22805	PF06107	Bacterial protein of unknown function (DUF951)
BF39_RS22810	PF00924	Mechanosensitive ion channel
BF39_RS22815	PF06866	Protein of unknown function (DUF1256)
BF39_RS22820	PF02195	ParB-like nuclease domain
BF39_RS22820	PF17762	HTH domain found in ParB protein
BF39_RS22825	PF13614	AAA domain
BF39_RS22830	PF02195	ParB-like nuclease domain
BF39_RS22830	PF17762	HTH domain found in ParB protein
BF39_RS22835	PF02527	rRNA small subunit methyltransferase G
BF39_RS22840	PF01134	Glucose inhibited division protein A
BF39_RS22840	PF13932	GidA associated domain
BF39_RS22845	PF10396	GTP-binding protein TrmE N-terminus
BF39_RS22845	PF01926	50S ribosome-binding GTPase
BF39_RS22845	PF12631	MnmE helical domain
BF39_RS22850	PF01424	R3H domain
BF39_RS22850	PF14804	Jag N-terminus
BF39_RS22855	PF02096	60Kd inner membrane protein
BF39_RS22860	PF00825	Ribonuclease P
BF39_RS22865	PF00468	Ribosomal protein L34
BF39_RS22870	PF08299	Bacterial dnaA protein helix-turn-helix
BF39_RS22870	PF00308	Bacterial dnaA  protein
BF39_RS22870	PF11638	DnaA N-terminal domain
BF39_RS22875	PF02768	DNA polymerase III beta subunit, C-terminal domain
BF39_RS22875	PF02767	DNA polymerase III beta subunit, central domain
BF39_RS22875	PF00712	DNA polymerase III beta subunit, N-terminal domain
BF39_RS22885	PF02463	RecF/RecN/SMC N terminal domain
BF39_RS22890	PF00986	DNA gyrase B subunit, carboxyl terminus
BF39_RS22890	PF01751	Toprim domain
BF39_RS22890	PF00204	DNA gyrase B
BF39_RS22890	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS22895	PF00521	DNA gyrase/topoisomerase IV, subunit A
BF39_RS22895	PF03989	DNA gyrase C-terminal domain, beta-propeller
BF39_RS22915	PF14175	YaaC-like Protein
BF39_RS22920	PF00478	IMP dehydrogenase / GMP reductase domain
BF39_RS22920	PF00571	CBS domain
BF39_RS22925	PF00768	D-alanyl-D-alanine carboxypeptidase
BF39_RS22925	PF07943	Penicillin-binding protein 5, C-terminal domain
BF39_RS22930	PF01680	SOR/SNZ family
BF39_RS22935	PF01174	SNO glutamine amidotransferase family
BF39_RS22940	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF39_RS22940	PF02403	Seryl-tRNA synthetase N-terminal domain
BF39_RS22955	PF01712	Deoxynucleoside kinase
BF39_RS22960	PF01712	Deoxynucleoside kinase
BF39_RS22965	PF00857	Isochorismatase family
BF39_RS22975	PF14437	MafB19-like deaminase
BF39_RS22980	PF12169	DNA polymerase III subunits gamma and tau domain III
BF39_RS22985	PF02575	YbaB/EbfC DNA-binding family
BF39_RS22990	PF02132	RecR protein
BF39_RS22990	PF13662	Toprim domain
BF39_RS22995	PF10704	Protein of unknown function (DUF2508)
BF39_RS23000	PF07441	SigmaK-factor processing regulatory protein BofA
BF39_RS23025	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BF39_RS23025	PF01276	Orn/Lys/Arg decarboxylase, major domain
BF39_RS23030	PF02223	Thymidylate kinase
BF39_RS23035	PF09115	DNA polymerase III, delta subunit, C terminal
BF39_RS23040	PF04468	PSP1 C-terminal conserved region
BF39_RS23045	PF06156	Initiation control protein YabA
BF39_RS23050	PF05175	Methyltransferase small domain
BF39_RS23055	PF01541	GIY-YIG catalytic domain
BF39_RS23060	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BF39_RS23065	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BF39_RS23065	PF18277	AbrB C-terminal domain
BF39_RS23070	PF08264	Anticodon-binding domain of tRNA
BF39_RS23070	PF01588	Putative tRNA binding domain
BF39_RS23070	PF09334	tRNA synthetases class I (M)
BF39_RS23075	PF01026	TatD related DNase
BF39_RS23080	PF13331	Domain of unknown function (DUF4093)
BF39_RS23080	PF13662	Toprim domain
BF39_RS23085	PF00398	Ribosomal RNA adenine dimethylase
BF39_RS23090	PF05582	YabG peptidase U57
BF39_RS23095	PF06257	Biofilm formation stimulator VEG
BF39_RS23100	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF39_RS23105	PF08544	GHMP kinases C terminal 
BF39_RS23105	PF00288	GHMP kinases N terminal domain
BF39_RS23110	PF09182	Bacterial purine repressor, N-terminal
BF39_RS23110	PF00156	Phosphoribosyl transferase domain
BF39_RS23115	PF01042	Endoribonuclease L-PSP
BF39_RS23120	PF04026	SpoVG
BF39_RS23125	PF00483	Nucleotidyl transferase
BF39_RS23125	PF00132	Bacterial transferase hexapeptide (six repeats)
BF39_RS23130	PF14572	Phosphoribosyl synthetase-associated domain
BF39_RS23130	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
BF39_RS23135	PF01195	Peptidyl-tRNA hydrolase
BF39_RS23145	PF03461	TRCF domain
BF39_RS23145	PF02559	CarD-like/TRCF domain
BF39_RS23145	PF00271	Helicase conserved C-terminal domain
BF39_RS23145	PF17757	UvrB interaction domain
BF39_RS23145	PF00270	DEAD/DEAH box helicase
BF39_RS23150	PF15714	Stage V sporulation protein T C-terminal, transcription factor
BF39_RS23150	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BF39_RS23155	PF14667	Polysaccharide biosynthesis C-terminal domain
BF39_RS23155	PF01943	Polysaccharide biosynthesis protein
BF39_RS23160	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BF39_RS23160	PF03819	MazG nucleotide pyrophosphohydrolase domain
BF39_RS23165	PF01479	S4 domain
BF39_RS23170	PF07873	YabP family
BF39_RS23175	PF09578	Spore cortex protein YabQ (Spore_YabQ)
BF39_RS23185	PF00575	S1 RNA binding domain
BF39_RS23200	PF07228	Stage II sporulation protein E (SpoIIE)
BF39_RS23210	PF00156	Phosphoribosyl transferase domain
BF39_RS23215	PF01434	Peptidase family M41
BF39_RS23215	PF06480	FtsH Extracellular
BF39_RS23215	PF17862	AAA+ lid domain
BF39_RS23215	PF00004	ATPase family associated with various cellular activities (AAA)
BF39_RS23220	PF03309	Type III pantothenate kinase
BF39_RS23225	PF01430	Hsp33 protein
BF39_RS23230	PF00291	Pyridoxal-phosphate dependent enzyme
BF39_RS23235	PF04715	Anthranilate synthase component I, N terminal region
BF39_RS23235	PF00425	chorismate binding enzyme
BF39_RS23240	PF00117	Glutamine amidotransferase class-I
BF39_RS23245	PF01063	Amino-transferase class IV
BF39_RS23250	PF00809	Pterin binding enzyme
BF39_RS23255	PF02152	Dihydroneopterin aldolase
BF39_RS23260	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
BF39_RS23265	PF01381	Helix-turn-helix
BF39_RS23270	PF01207	Dihydrouridine synthase (Dus)
BF39_RS23275	PF01336	OB-fold nucleic acid binding domain
BF39_RS23275	PF00152	tRNA synthetases class II (D, K and N) 
BF39_RS23295	PF17727	CtsR C-terminal dimerization domain
BF39_RS23295	PF05848	CtsR N-terminal HTH domain
BF39_RS23300	PF02151	UvrB/uvrC motif
BF39_RS23305	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
BF39_RS23310	PF00004	ATPase family associated with various cellular activities (AAA)
BF39_RS23310	PF17871	AAA lid domain
BF39_RS23310	PF07724	AAA domain (Cdc48 subfamily)
BF39_RS23310	PF02861	Clp amino terminal domain, pathogenicity island component
BF39_RS23310	PF10431	C-terminal, D2-small domain, of ClpB protein 
BF39_RS23315	PF18073	Rubredoxin metal binding domain
BF39_RS23320	PF10635	DisA bacterial checkpoint controller linker region 
BF39_RS23320	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BF39_RS23330	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
BF39_RS23335	PF02542	YgbB family
BF39_RS23340	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BF39_RS23345	PF00132	Bacterial transferase hexapeptide (six repeats)
BF39_RS23345	PF06426	Serine acetyltransferase, N-terminal 
BF39_RS23350	PF01406	tRNA synthetases class I (C) catalytic domain
BF39_RS23350	PF09190	DALR domain
BF39_RS23355	PF00636	Ribonuclease III domain
BF39_RS23360	PF00588	SpoU rRNA Methylase family
BF39_RS23360	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BF39_RS23365	PF05991	YacP-like NYN domain
BF39_RS23370	PF04542	Sigma-70 region 2 
BF39_RS23370	PF08281	Sigma-70, region 4
BF39_RS23375	PF00471	Ribosomal protein L33
BF39_RS23380	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
BF39_RS23385	PF00467	KOW motif
BF39_RS23385	PF02357	Transcription termination factor nusG
BF39_RS23390	PF03946	Ribosomal protein L11, N-terminal domain
BF39_RS23390	PF00298	Ribosomal protein L11, RNA binding domain
BF39_RS23395	PF00687	Ribosomal protein L1p/L10e family
BF39_RS23400	PF00466	Ribosomal protein L10
BF39_RS23405	PF00542	Ribosomal protein L7/L12 C-terminal domain
BF39_RS23405	PF16320	Ribosomal protein L7/L12 dimerisation domain
BF39_RS23410	PF05175	Methyltransferase small domain
BF39_RS23415	PF04565	RNA polymerase Rpb2, domain 3
BF39_RS23415	PF04561	RNA polymerase Rpb2, domain 2
BF39_RS23415	PF04560	RNA polymerase Rpb2, domain 7
BF39_RS23415	PF10385	RNA polymerase beta subunit external 1 domain
BF39_RS23415	PF04563	RNA polymerase beta subunit
BF39_RS23415	PF00562	RNA polymerase Rpb2, domain 6
BF39_RS23420	PF04997	RNA polymerase Rpb1, domain 1
BF39_RS23420	PF00623	RNA polymerase Rpb1, domain 2
BF39_RS23420	PF04983	RNA polymerase Rpb1, domain 3
BF39_RS23420	PF05000	RNA polymerase Rpb1, domain 4
BF39_RS23420	PF04998	RNA polymerase Rpb1, domain 5
BF39_RS23425	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
BF39_RS23430	PF00164	Ribosomal protein S12/S23
BF39_RS23435	PF00177	Ribosomal protein S7p/S5e
BF39_RS23440	PF03144	Elongation factor Tu domain 2
BF39_RS23440	PF00009	Elongation factor Tu GTP binding domain
BF39_RS23440	PF00679	Elongation factor G C-terminus
BF39_RS23440	PF03764	Elongation factor G, domain IV
BF39_RS23440	PF14492	Elongation Factor G, domain II
BF39_RS23445	PF03144	Elongation factor Tu domain 2
BF39_RS23445	PF03143	Elongation factor Tu C-terminal domain
BF39_RS23445	PF00009	Elongation factor Tu GTP binding domain
BF39_RS23450	PF00338	Ribosomal protein S10p/S20e
BF39_RS23455	PF00297	Ribosomal protein L3
BF39_RS23460	PF00573	Ribosomal protein L4/L1 family
BF39_RS23465	PF00276	Ribosomal protein L23
BF39_RS23470	PF03947	Ribosomal Proteins L2, C-terminal domain
BF39_RS23470	PF00181	Ribosomal Proteins L2, RNA binding domain
BF39_RS23475	PF00203	Ribosomal protein S19
BF39_RS23480	PF00237	Ribosomal protein L22p/L17e
BF39_RS23485	PF00189	Ribosomal protein S3, C-terminal domain
BF39_RS23485	PF07650	KH domain
BF39_RS23490	PF00252	Ribosomal protein L16p/L10e
BF39_RS23495	PF00831	Ribosomal L29 protein
BF39_RS23500	PF00366	Ribosomal protein S17
BF39_RS23505	PF00238	Ribosomal protein L14p/L23e
BF39_RS23510	PF00467	KOW motif
BF39_RS23510	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
BF39_RS23515	PF00281	Ribosomal protein L5
BF39_RS23515	PF00673	ribosomal L5P family C-terminus
BF39_RS23520	PF00253	Ribosomal protein S14p/S29e
BF39_RS23525	PF00410	Ribosomal protein S8
BF39_RS23530	PF00347	Ribosomal protein L6
BF39_RS23535	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
BF39_RS23540	PF03719	Ribosomal protein S5, C-terminal domain
BF39_RS23540	PF00333	Ribosomal protein S5, N-terminal domain
BF39_RS23545	PF00327	Ribosomal protein L30p/L7e
BF39_RS23550	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
BF39_RS23555	PF00344	SecY translocase
BF39_RS23560	PF05191	Adenylate kinase, active site lid
BF39_RS23565	PF00557	Metallopeptidase family M24
BF39_RS23570	PF01176	Translation initiation factor 1A / IF-1
BF39_RS23575	PF00444	Ribosomal protein L36
BF39_RS23580	PF00416	Ribosomal protein S13/S18
BF39_RS23585	PF00411	Ribosomal protein S11
BF39_RS23590	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
BF39_RS23590	PF01000	RNA polymerase Rpb3/RpoA insert domain
BF39_RS23590	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
BF39_RS23595	PF01196	Ribosomal protein L17
BF39_RS23600	PF00005	ABC transporter
BF39_RS23610	PF02361	Cobalt transport protein
BF39_RS23615	PF01416	tRNA pseudouridine synthase
BF39_RS23620	PF00572	Ribosomal protein L13
BF39_RS23625	PF00380	Ribosomal protein S9/S16
BF39_RS23635	PF01520	N-acetylmuramoyl-L-alanine amidase
BF39_RS23640	PF10609	NUBPL iron-transfer P-loop NTPase
BF39_RS23645	PF17898	Spore germination GerD central core domain
BF39_RS23650	PF14089	KinB-signalling pathway activation in sporulation
BF39_RS23655	PF01522	Polysaccharide deacetylase
BF39_RS23725	PF02595	Glycerate kinase family
BF39_RS23730	PF02595	Glycerate kinase family
BF39_RS23735	PF00491	Arginase family
BF39_RS23740	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BF39_RS23745	PF07949	YbbR-like protein
BF39_RS23750	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BF39_RS23750	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BF39_RS23750	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BF39_RS23750	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BF39_RS23760	PF01380	SIS domain
BF39_RS23765	PF00561	alpha/beta hydrolase fold
BF39_RS23770	PF07729	FCD domain
BF39_RS23770	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS23780	PF02447	GntP family permease
BF39_RS23785	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BF39_RS23785	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BF39_RS23790	PF00326	Prolyl oligopeptidase family
BF39_RS23790	PF07676	WD40-like Beta Propeller Repeat
BF39_RS23830	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS23835	PF00005	ABC transporter
BF39_RS23835	PF09383	NIL domain
BF39_RS23840	PF03180	NLPA lipoprotein
BF39_RS23845	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS23845	PF00107	Zinc-binding dehydrogenase
BF39_RS23855	PF01565	FAD binding domain 
BF39_RS23860	PF07690	Major Facilitator Superfamily
BF39_RS23870	PF07690	Major Facilitator Superfamily
BF39_RS23885	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS23890	PF12911	N-terminal TM domain of oligopeptide transport permease C
BF39_RS23890	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS23895	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS23895	PF00005	ABC transporter
BF39_RS23900	PF00005	ABC transporter
BF39_RS23900	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS23905	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS23915	PF12833	Helix-turn-helix domain
BF39_RS23930	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS23935	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS23940	PF00248	Aldo/keto reductase family
BF39_RS23945	PF03807	NADP oxidoreductase coenzyme F420-dependent
BF39_RS23945	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BF39_RS23955	PF04973	Nicotinamide mononucleotide transporter
BF39_RS23960	PF06800	Sugar transport protein
BF39_RS23965	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS23980	PF12727	PBP superfamily domain
BF39_RS23980	PF12728	Helix-turn-helix domain
BF39_RS23995	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF39_RS23995	PF03466	LysR substrate binding domain
BF39_RS24000	PF00892	EamA-like transporter family
BF39_RS24005	PF14142	YrzO-like protein
BF39_RS24010	PF01553	Acyltransferase
BF39_RS24020	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS24020	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BF39_RS24030	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF39_RS24030	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS24045	PF01026	TatD related DNase
BF39_RS24050	PF10096	Uncharacterized protein conserved in bacteria (DUF2334)
BF39_RS24075	PF00005	ABC transporter
BF39_RS24075	PF12848	ABC transporter
BF39_RS24075	PF16326	ABC transporter C-terminal domain
BF39_RS24090	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS24095	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS24100	PF12911	N-terminal TM domain of oligopeptide transport permease C
BF39_RS24100	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS24105	PF00005	ABC transporter
BF39_RS24105	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS24110	PF00005	ABC transporter
BF39_RS24110	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS24150	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS24155	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BF39_RS24165	PF07690	Major Facilitator Superfamily
BF39_RS24170	PF01820	D-ala D-ala ligase N-terminus
BF39_RS24170	PF07478	D-ala D-ala ligase C-terminus
BF39_RS24175	PF07478	D-ala D-ala ligase C-terminus
BF39_RS24175	PF01820	D-ala D-ala ligase N-terminus
BF39_RS24180	PF08245	Mur ligase middle domain
BF39_RS24180	PF01225	Mur ligase family, catalytic domain
BF39_RS24180	PF02875	Mur ligase family, glutamate ligase domain
BF39_RS24185	PF00270	DEAD/DEAH box helicase
BF39_RS24185	PF00271	Helicase conserved C-terminal domain
BF39_RS24190	PF03851	UV-endonuclease UvdE
BF39_RS24195	PF01694	Rhomboid family
BF39_RS24200	PF01648	4'-phosphopantetheinyl transferase superfamily
BF39_RS24210	PF01168	Alanine racemase, N-terminal domain
BF39_RS24210	PF00842	Alanine racemase, C-terminal domain
BF39_RS24215	PF01402	Ribbon-helix-helix protein, copG family
BF39_RS24220	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
BF39_RS24225	PF17674	HHH domain
BF39_RS24225	PF09371	Tex-like protein N-terminal domain
BF39_RS24225	PF00575	S1 RNA binding domain
BF39_RS24225	PF16921	Tex protein YqgF-like domain
BF39_RS24235	PF17283	SprT-like zinc ribbon domain
BF39_RS24235	PF10263	SprT-like family
BF39_RS24320	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
BF39_RS24325	PF00814	Glycoprotease family
BF39_RS24330	PF00583	Acetyltransferase (GNAT) family
BF39_RS24335	PF00814	Glycoprotease family
BF39_RS24340	PF00005	ABC transporter
BF39_RS24340	PF12848	ABC transporter
BF39_RS24340	PF16326	ABC transporter C-terminal domain
BF39_RS24345	PF02629	CoA binding domain
BF39_RS24345	PF06971	Putative DNA-binding protein N-terminus
BF39_RS24355	PF02517	CPBP intramembrane metalloprotease
BF39_RS24360	PF00166	Chaperonin 10 Kd subunit
BF39_RS24365	PF00118	TCP-1/cpn60 chaperonin family
BF39_RS24370	PF00958	GMP synthase C terminal domain
BF39_RS24370	PF02540	NAD synthase
BF39_RS24370	PF00117	Glutamine amidotransferase class-I
BF39_RS24375	PF00860	Permease family
BF39_RS24380	PF00072	Response regulator receiver domain
BF39_RS24380	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS24385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS24385	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS24385	PF00989	PAS fold
BF39_RS24385	PF16736	Single Cache-like 
BF39_RS24405	PF14307	Glycosyltransferase WbsX
BF39_RS24405	PF05045	Rhamnan synthesis protein F
BF39_RS24415	PF08241	Methyltransferase domain
BF39_RS24455	PF02673	Bacitracin resistance protein BacA
BF39_RS24465	PF00005	ABC transporter
BF39_RS24470	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS24470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS24475	PF00072	Response regulator receiver domain
BF39_RS24475	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS24495	PF00731	AIR carboxylase
BF39_RS24500	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
BF39_RS24500	PF02222	ATP-grasp domain
BF39_RS24505	PF00206	Lyase
BF39_RS24505	PF10397	Adenylosuccinate lyase C-terminus
BF39_RS24510	PF01259	SAICAR synthetase
BF39_RS24515	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
BF39_RS24525	PF02769	AIR synthase related protein, C-terminal domain
BF39_RS24525	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
BF39_RS24525	PF00586	AIR synthase related protein, N-terminal domain
BF39_RS24530	PF00156	Phosphoribosyl transferase domain
BF39_RS24535	PF02769	AIR synthase related protein, C-terminal domain
BF39_RS24535	PF00586	AIR synthase related protein, N-terminal domain
BF39_RS24540	PF00551	Formyl transferase
BF39_RS24545	PF02142	MGS-like domain
BF39_RS24545	PF01808	AICARFT/IMPCHase bienzyme
BF39_RS24550	PF02844	Phosphoribosylglycinamide synthetase, N domain
BF39_RS24550	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
BF39_RS24550	PF02843	Phosphoribosylglycinamide synthetase, C domain
BF39_RS24570	PF01884	PcrB family
BF39_RS24575	PF00580	UvrD/REP helicase N-terminal domain
BF39_RS24575	PF13361	UvrD-like helicase C-terminal domain
BF39_RS24580	PF01653	NAD-dependent DNA ligase adenylation domain
BF39_RS24580	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
BF39_RS24580	PF12826	Helix-hairpin-helix motif
BF39_RS24580	PF03120	NAD-dependent DNA ligase OB-fold domain
BF39_RS24580	PF00533	BRCA1 C Terminus (BRCT) domain
BF39_RS24585	PF07537	CamS sex pheromone cAM373 precursor
BF39_RS24590	PF01925	Sulfite exporter TauE/SafE
BF39_RS24595	PF00171	Aldehyde dehydrogenase family
BF39_RS24605	PF00857	Isochorismatase family
BF39_RS24610	PF09383	NIL domain
BF39_RS24610	PF00005	ABC transporter
BF39_RS24615	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS24620	PF03180	NLPA lipoprotein
BF39_RS24640	PF01047	MarR family
BF39_RS24650	PF02686	Glu-tRNAGln amidotransferase C subunit
BF39_RS24655	PF01425	Amidase
BF39_RS24660	PF02934	GatB/GatE catalytic domain
BF39_RS24660	PF02637	GatB domain
BF39_RS24665	PF00781	Diacylglycerol kinase catalytic domain
BF39_RS24670	PF13419	Haloacid dehalogenase-like hydrolase
BF39_RS24675	PF00202	Aminotransferase class-III
BF39_RS24685	PF00171	Aldehyde dehydrogenase family
BF39_RS24690	PF00893	Small Multidrug Resistance protein
BF39_RS24695	PF02073	Thermophilic metalloprotease (M29)
BF39_RS24710	PF07670	Nucleoside recognition
BF39_RS24710	PF01773	Na+ dependent nucleoside transporter N-terminus
BF39_RS24710	PF07662	Na+ dependent nucleoside transporter C-terminus
BF39_RS24715	PF01938	TRAM domain
BF39_RS24715	PF05958	tRNA (Uracil-5-)-methyltransferase
BF39_RS24715	PF02475	Met-10+ like-protein
BF39_RS24720	PF01207	Dihydrouridine synthase (Dus)
BF39_RS24730	PF07308	Protein of unknown function (DUF1456)
BF39_RS24745	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BF39_RS24745	PF13378	Enolase C-terminal domain-like
BF39_RS24755	PF03553	Na+/H+ antiporter family
BF39_RS24760	PF07687	Peptidase dimerisation domain
BF39_RS24760	PF01546	Peptidase family M20/M25/M40
BF39_RS24770	PF13192	Thioredoxin domain
BF39_RS24770	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS24775	PF00578	AhpC/TSA family
BF39_RS24780	PF01636	Phosphotransferase enzyme family
BF39_RS24785	PF01008	Initiation factor 2 subunit family
BF39_RS24790	PF00596	Class II Aldolase and Adducin N-terminal domain
BF39_RS24795	PF01032	FecCD transport family
BF39_RS24800	PF01032	FecCD transport family
BF39_RS24805	PF01497	Periplasmic binding protein
BF39_RS24810	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS24825	PF12728	Helix-turn-helix domain
BF39_RS24860	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS24860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS24860	PF13426	PAS domain
BF39_RS24860	PF00989	PAS fold
BF39_RS24860	PF13188	PAS domain
BF39_RS24880	PF10127	RNA repair pathway DNA polymerase beta family
BF39_RS24885	PF07690	Major Facilitator Superfamily
BF39_RS24890	PF00355	Rieske [2Fe-2S] domain
BF39_RS24890	PF01266	FAD dependent oxidoreductase
BF39_RS24900	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS24905	PF00497	Bacterial extracellular solute-binding proteins, family 3
BF39_RS24910	PF00005	ABC transporter
BF39_RS24920	PF12729	Four helix bundle sensory module for signal transduction
BF39_RS24920	PF00672	HAMP domain
BF39_RS24920	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS24925	PF12729	Four helix bundle sensory module for signal transduction
BF39_RS24925	PF00672	HAMP domain
BF39_RS24925	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS24930	PF00128	Alpha amylase, catalytic domain
BF39_RS24930	PF16657	Maltogenic Amylase, C-terminal domain
BF39_RS24935	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BF39_RS24935	PF00367	phosphotransferase system, EIIB
BF39_RS24935	PF02378	Phosphotransferase system, EIIC 
BF39_RS24940	PF03372	Endonuclease/Exonuclease/phosphatase family
BF39_RS24945	PF01061	ABC-2 type transporter
BF39_RS24950	PF01751	Toprim domain
BF39_RS24950	PF01131	DNA topoisomerase
BF39_RS24955	PF02110	Hydroxyethylthiazole kinase family
BF39_RS24960	PF02581	Thiamine monophosphate synthase
BF39_RS24965	PF03605	Anaerobic c4-dicarboxylate membrane transporter
BF39_RS24970	PF00672	HAMP domain
BF39_RS24970	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS24975	PF01910	Thiamine-binding protein
BF39_RS24980	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS24990	PF00005	ABC transporter
BF39_RS24995	PF00005	ABC transporter
BF39_RS24995	PF12848	ABC transporter
BF39_RS25000	PF00704	Glycosyl hydrolases family 18
BF39_RS25000	PF00041	Fibronectin type III domain
BF39_RS25020	PF08360	QacR-like protein, C-terminal region
BF39_RS25020	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS25040	PF11700	Vacuole effluxer Atg22 like
BF39_RS25055	PF09180	Prolyl-tRNA synthetase, C-terminal
BF39_RS25055	PF03129	Anticodon binding domain
BF39_RS25055	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF39_RS25065	PF00480	ROK family
BF39_RS25070	PF02342	TerD domain
BF39_RS25075	PF02342	TerD domain
BF39_RS25080	PF02342	TerD domain
BF39_RS25085	PF03741	Integral membrane protein TerC family
BF39_RS25090	PF14266	Putative component of 'biosynthetic module'
BF39_RS25095	PF05816	Toxic anion resistance protein (TelA)
BF39_RS25100	PF00689	Cation transporting ATPase, C-terminus
BF39_RS25100	PF00690	Cation transporter/ATPase, N-terminus
BF39_RS25105	PF06569	Protein of unknown function (DUF1128)
BF39_RS25110	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BF39_RS25120	PF03631	Virulence factor BrkB
BF39_RS25130	PF00892	EamA-like transporter family
BF39_RS25150	PF09335	SNARE associated Golgi protein
BF39_RS25165	PF16242	Pyridoxamine 5'-phosphate oxidase like
BF39_RS25170	PF01699	Sodium/calcium exchanger protein
BF39_RS25175	PF14167	YfkD-like protein
BF39_RS25180	PF04055	Radical SAM superfamily
BF39_RS25180	PF08756	YfkB-like domain
BF39_RS25190	PF05681	Fumarate hydratase (Fumerase)
BF39_RS25190	PF05683	Fumarase C-terminus
BF39_RS25195	PF01522	Polysaccharide deacetylase
BF39_RS25205	PF00730	HhH-GPD superfamily base excision DNA repair protein
BF39_RS25210	PF01938	TRAM domain
BF39_RS25210	PF05958	tRNA (Uracil-5-)-methyltransferase
BF39_RS25215	PF00589	Phage integrase family
BF39_RS25215	PF14659	Phage integrase, N-terminal SAM-like domain
BF39_RS25220	PF01381	Helix-turn-helix
BF39_RS25235	PF01381	Helix-turn-helix
BF39_RS25270	PF01695	IstB-like ATP binding protein
BF39_RS25270	PF07319	Primosomal protein DnaI N-terminus
BF39_RS25365	PF00589	Phage integrase family
BF39_RS25370	PF00589	Phage integrase family
BF39_RS25495	PF01416	tRNA pseudouridine synthase
BF39_RS25505	PF13426	PAS domain
BF39_RS25505	PF02954	Bacterial regulatory protein, Fis family
BF39_RS25505	PF00158	Sigma-54 interaction domain
BF39_RS25515	PF00324	Amino acid permease
BF39_RS25520	PF01546	Peptidase family M20/M25/M40
BF39_RS25520	PF07687	Peptidase dimerisation domain
BF39_RS25550	PF04960	Glutaminase
BF39_RS25555	PF02378	Phosphotransferase system, EIIC 
BF39_RS25555	PF00367	phosphotransferase system, EIIB
BF39_RS25560	PF00144	Beta-lactamase
BF39_RS25575	PF00535	Glycosyl transferase family 2
BF39_RS25580	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BF39_RS25580	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BF39_RS25580	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BF39_RS25585	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BF39_RS25585	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BF39_RS25585	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BF39_RS25590	PF00551	Formyl transferase
BF39_RS25590	PF02911	Formyl transferase, C-terminal domain
BF39_RS25590	PF01370	NAD dependent epimerase/dehydratase family
BF39_RS25595	PF00535	Glycosyl transferase family 2
BF39_RS25605	PF01228	Glycine radical
BF39_RS25605	PF02901	Pyruvate formate lyase-like
BF39_RS25610	PF04055	Radical SAM superfamily
BF39_RS25615	PF04101	Glycosyltransferase family 28 C-terminal domain
BF39_RS25615	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase
BF39_RS25630	PF01979	Amidohydrolase family
BF39_RS25635	PF01370	NAD dependent epimerase/dehydratase family
BF39_RS25635	PF08338	Domain of unknown function (DUF1731)
BF39_RS25640	PF02631	RecX family
BF39_RS25655	PF08176	Small acid-soluble spore protein K family
BF39_RS25660	PF14043	WVELL protein
BF39_RS25665	PF04307	LexA-binding, inner membrane-associated putative hydrolase
BF39_RS25670	PF00730	HhH-GPD superfamily base excision DNA repair protein
BF39_RS25670	PF14815	NUDIX domain
BF39_RS25680	PF04259	Small, acid-soluble spore protein, gamma-type 
BF39_RS25685	PF14182	YgaB-like protein
BF39_RS25690	PF04167	Protein of unknown function (DUF402)
BF39_RS25695	PF00664	ABC transporter transmembrane region
BF39_RS25695	PF00005	ABC transporter
BF39_RS25700	PF06081	Aromatic acid exporter family member 1
BF39_RS25705	PF01645	Conserved region in glutamate synthase
BF39_RS25705	PF01493	GXGXG motif
BF39_RS25705	PF04898	Glutamate synthase central domain
BF39_RS25705	PF00310	Glutamine amidotransferases class-II
BF39_RS25710	PF00202	Aminotransferase class-III
BF39_RS25715	PF00005	ABC transporter
BF39_RS25730	PF07885	Ion channel
BF39_RS25735	PF00578	AhpC/TSA family
BF39_RS25740	PF01475	Ferric uptake regulator family
BF39_RS25745	PF11023	Zinc-ribbon containing domain
BF39_RS25845	PF01709	Transcriptional regulator
BF39_RS25850	PF00293	NUDIX domain
BF39_RS25850	PF13344	Haloacid dehalogenase-like hydrolase
BF39_RS25855	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS25855	PF00912	Transglycosylase
BF39_RS25860	PF13462	Thioredoxin
BF39_RS25870	PF08331	Domain of unknown function (DUF1730)
BF39_RS25875	PF12671	Putative amidase domain
BF39_RS25880	PF00588	SpoU rRNA Methylase family
BF39_RS25885	PF03707	Bacterial signalling protein N terminal repeat
BF39_RS25885	PF00990	Diguanylate cyclase, GGDEF domain
BF39_RS25885	PF00563	EAL domain
BF39_RS25895	PF06798	PrkA serine protein kinase C-terminal domain
BF39_RS25895	PF08298	PrkA AAA domain
BF39_RS25905	PF04285	Protein of unknown function (DUF444)
BF39_RS25920	PF02028	BCCT, betaine/carnitine/choline family transporter
BF39_RS25925	PF01752	Collagenase
BF39_RS25925	PF08453	Peptidase family M9 N-terminal
BF39_RS25925	PF18496	Collagenase G catalytic helper subdomain
BF39_RS25935	PF15975	Flotillin
BF39_RS25935	PF01145	SPFH domain / Band 7 family
BF39_RS25940	PF00672	HAMP domain
BF39_RS25940	PF02743	Cache domain
BF39_RS25940	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS25945	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BF39_RS25945	PF17203	Single cache domain 3
BF39_RS25945	PF00989	PAS fold
BF39_RS25945	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS25950	PF00072	Response regulator receiver domain
BF39_RS25950	PF08279	HTH domain
BF39_RS25950	PF12431	Transcriptional regulator 
BF39_RS25955	PF03600	Citrate transporter
BF39_RS25975	PF04309	Glycerol-3-phosphate responsive antiterminator
BF39_RS25980	PF17912	MalK OB fold domain
BF39_RS25980	PF00005	ABC transporter
BF39_RS25985	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS25990	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS25995	PF13416	Bacterial extracellular solute-binding protein
BF39_RS26000	PF00149	Calcineurin-like phosphoesterase
BF39_RS26005	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS26005	PF00072	Response regulator receiver domain
BF39_RS26010	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS26010	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS26020	PF13529	Peptidase_C39 like family
BF39_RS26025	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS26025	PF00672	HAMP domain
BF39_RS26025	PF02743	Cache domain
BF39_RS26030	PF17203	Single cache domain 3
BF39_RS26030	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS26030	PF00989	PAS fold
BF39_RS26030	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BF39_RS26035	PF00072	Response regulator receiver domain
BF39_RS26040	PF03390	2-hydroxycarboxylate transporter family
BF39_RS26045	PF00390	Malic enzyme, N-terminal domain
BF39_RS26045	PF03949	Malic enzyme, NAD binding domain
BF39_RS26055	PF00892	EamA-like transporter family
BF39_RS26060	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS26060	PF00155	Aminotransferase class I and II
BF39_RS26070	PF00989	PAS fold
BF39_RS26070	PF18698	Histidine kinase sensor domain
BF39_RS26070	PF00672	HAMP domain
BF39_RS26070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS26070	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS26075	PF00072	Response regulator receiver domain
BF39_RS26075	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS26085	PF00583	Acetyltransferase (GNAT) family
BF39_RS26085	PF13508	Acetyltransferase (GNAT) domain
BF39_RS26090	PF02634	FdhD/NarQ family
BF39_RS26095	PF00037	4Fe-4S binding domain
BF39_RS26095	PF00384	Molybdopterin oxidoreductase
BF39_RS26095	PF01568	Molydopterin dinucleotide binding domain
BF39_RS26095	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BF39_RS26095	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BF39_RS26100	PF07849	Protein of unknown function (DUF1641)
BF39_RS26110	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
BF39_RS26110	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BF39_RS26115	PF13520	Amino acid permease
BF39_RS26120	PF01022	Bacterial regulatory protein, arsR family
BF39_RS26125	PF00403	Heavy-metal-associated domain
BF39_RS26130	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
BF39_RS26130	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
BF39_RS26130	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
BF39_RS26140	PF01447	Thermolysin metallopeptidase, catalytic domain
BF39_RS26140	PF03413	Peptidase propeptide and YPEB domain
BF39_RS26140	PF07504	Fungalysin/Thermolysin Propeptide Motif
BF39_RS26140	PF02868	Thermolysin metallopeptidase, alpha-helical domain
BF39_RS26160	PF04294	VanW like protein
BF39_RS26165	PF03816	Cell envelope-related transcriptional attenuator domain
BF39_RS26170	PF01773	Na+ dependent nucleoside transporter N-terminus
BF39_RS26170	PF07662	Na+ dependent nucleoside transporter C-terminus
BF39_RS26175	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS26180	PF01595	Cyclin M transmembrane N-terminal domain
BF39_RS26180	PF00571	CBS domain
BF39_RS26180	PF03471	Transporter associated domain
BF39_RS26185	PF00206	Lyase
BF39_RS26185	PF10415	Fumarase C C-terminus
BF39_RS26190	PF02652	L-lactate permease
BF39_RS26195	PF01022	Bacterial regulatory protein, arsR family
BF39_RS26200	PF08141	Small acid-soluble spore protein H family
BF39_RS26205	PF00854	POT family
BF39_RS26210	PF01497	Periplasmic binding protein
BF39_RS26215	PF01032	FecCD transport family
BF39_RS26220	PF01032	FecCD transport family
BF39_RS26225	PF00005	ABC transporter
BF39_RS26230	PF08241	Methyltransferase domain
BF39_RS26235	PF00155	Aminotransferase class I and II
BF39_RS26240	PF01370	NAD dependent epimerase/dehydratase family
BF39_RS26245	PF13344	Haloacid dehalogenase-like hydrolase
BF39_RS26245	PF00293	NUDIX domain
BF39_RS26250	PF00092	von Willebrand factor type A domain
BF39_RS26255	PF07728	AAA domain (dynein-related subfamily)
BF39_RS26260	PF13396	Phospholipase_D-nuclease N-terminal
BF39_RS26260	PF13091	PLD-like domain
BF39_RS26275	PF00990	Diguanylate cyclase, GGDEF domain
BF39_RS26275	PF00563	EAL domain
BF39_RS26275	PF03707	Bacterial signalling protein N terminal repeat
BF39_RS26280	PF13520	Amino acid permease
BF39_RS26285	PF07702	UTRA domain
BF39_RS26285	PF00392	Bacterial regulatory proteins, gntR family
BF39_RS26290	PF02378	Phosphotransferase system, EIIC 
BF39_RS26290	PF00367	phosphotransferase system, EIIB
BF39_RS26295	PF00128	Alpha amylase, catalytic domain
BF39_RS26295	PF16657	Maltogenic Amylase, C-terminal domain
BF39_RS26310	PF03323	Bacillus/Clostridium GerA spore germination protein
BF39_RS26320	PF01636	Phosphotransferase enzyme family
BF39_RS26325	PF01235	Sodium:alanine symporter family
BF39_RS26330	PF00005	ABC transporter
BF39_RS26335	PF00497	Bacterial extracellular solute-binding proteins, family 3
BF39_RS26340	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS26345	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS26350	PF00324	Amino acid permease
BF39_RS26375	PF13280	WYL domain
BF39_RS26375	PF08279	HTH domain
BF39_RS26380	PF01872	RibD C-terminal domain
BF39_RS26385	PF18698	Histidine kinase sensor domain
BF39_RS26385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS26385	PF00672	HAMP domain
BF39_RS26385	PF00989	PAS fold
BF39_RS26385	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS26390	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS26390	PF00072	Response regulator receiver domain
BF39_RS26400	PF00916	Sulfate permease family
BF39_RS26400	PF01740	STAS domain
BF39_RS26405	PF00582	Universal stress protein family
BF39_RS26415	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS26420	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS26425	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS26430	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS26430	PF00005	ABC transporter
BF39_RS26435	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS26435	PF00005	ABC transporter
BF39_RS26440	PF07690	Major Facilitator Superfamily
BF39_RS26445	PF01047	MarR family
BF39_RS26450	PF07690	Major Facilitator Superfamily
BF39_RS26455	PF07690	Major Facilitator Superfamily
BF39_RS26460	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS26465	PF00294	pfkB family carbohydrate kinase
BF39_RS26470	PF05025	RbsD / FucU transport protein family
BF39_RS26475	PF00005	ABC transporter
BF39_RS26480	PF02653	Branched-chain amino acid transport system / permease component
BF39_RS26485	PF13407	Periplasmic binding protein domain
BF39_RS26490	PF00923	Transaldolase/Fructose-6-phosphate aldolase
BF39_RS26495	PF05547	Immune inhibitor A peptidase M6
BF39_RS26510	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS26510	PF00107	Zinc-binding dehydrogenase
BF39_RS26520	PF00882	Zinc dependent phospholipase C
BF39_RS26525	PF03372	Endonuclease/Exonuclease/phosphatase family
BF39_RS26550	PF02673	Bacitracin resistance protein BacA
BF39_RS26555	PF00672	HAMP domain
BF39_RS26555	PF02743	Cache domain
BF39_RS26555	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS26560	PF01476	LysM domain
BF39_RS26560	PF06725	3D domain
BF39_RS26565	PF01381	Helix-turn-helix
BF39_RS26575	PF04203	Sortase domain
BF39_RS26585	PF05525	Branched-chain amino acid transport protein
BF39_RS26600	PF00324	Amino acid permease
BF39_RS26605	PF00860	Permease family
BF39_RS26630	PF02080	TrkA-C domain
BF39_RS26630	PF00999	Sodium/hydrogen exchanger family
BF39_RS26630	PF02254	TrkA-N domain
BF39_RS26640	PF00510	Cytochrome c oxidase subunit III
BF39_RS26645	PF00115	Cytochrome C and Quinol oxidase polypeptide I
BF39_RS26650	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
BF39_RS26655	PF00324	Amino acid permease
BF39_RS26660	PF13529	Peptidase_C39 like family
BF39_RS26665	PF01546	Peptidase family M20/M25/M40
BF39_RS26665	PF07687	Peptidase dimerisation domain
BF39_RS26670	PF11755	Protein of unknown function (DUF3311)
BF39_RS26675	PF00474	Sodium:solute symporter family
BF39_RS26680	PF03323	Bacillus/Clostridium GerA spore germination protein
BF39_RS26685	PF03845	Spore germination protein
BF39_RS26690	PF05504	Spore germination B3/ GerAC like, C-terminal 
BF39_RS26700	PF17910	FeoB cytosolic helical domain
BF39_RS26700	PF07670	Nucleoside recognition
BF39_RS26700	PF02421	Ferrous iron transport protein B
BF39_RS26700	PF07664	Ferrous iron transport protein B C terminus
BF39_RS26705	PF17910	FeoB cytosolic helical domain
BF39_RS26705	PF07670	Nucleoside recognition
BF39_RS26705	PF02421	Ferrous iron transport protein B
BF39_RS26705	PF07664	Ferrous iron transport protein B C terminus
BF39_RS26710	PF04023	FeoA domain
BF39_RS26710	PF07664	Ferrous iron transport protein B C terminus
BF39_RS26710	PF07670	Nucleoside recognition
BF39_RS26710	PF02421	Ferrous iron transport protein B
BF39_RS26710	PF17910	FeoB cytosolic helical domain
BF39_RS26715	PF12849	PBP superfamily domain
BF39_RS26720	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS26725	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS26735	PF00873	AcrB/AcrD/AcrF family
BF39_RS26870	PF00571	CBS domain
BF39_RS26890	PF00246	Zinc carboxypeptidase
BF39_RS26890	PF08239	Bacterial SH3 domain
BF39_RS26895	PF03070	TENA/THI-4/PQQC family
BF39_RS26900	PF00005	ABC transporter
BF39_RS26905	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS26910	PF09084	NMT1/THI5 like
BF39_RS26915	PF02581	Thiamine monophosphate synthase
BF39_RS26920	PF01266	FAD dependent oxidoreductase
BF39_RS26925	PF02597	ThiS family
BF39_RS26930	PF05690	Thiazole biosynthesis protein ThiG
BF39_RS26935	PF00899	ThiF family
BF39_RS26940	PF08543	Phosphomethylpyrimidine kinase
BF39_RS26965	PF03814	Potassium-transporting ATPase A subunit
BF39_RS26975	PF02669	K+-transporting ATPase, c chain
BF39_RS26980	PF02702	Osmosensitive K+ channel His kinase sensor domain
BF39_RS26985	PF07690	Major Facilitator Superfamily
BF39_RS26990	PF01047	MarR family
BF39_RS27005	PF00860	Permease family
BF39_RS27025	PF00294	pfkB family carbohydrate kinase
BF39_RS27030	PF00251	Glycosyl hydrolases family 32 N-terminal domain
BF39_RS27030	PF08244	Glycosyl hydrolases family 32 C terminal
BF39_RS27035	PF02378	Phosphotransferase system, EIIC 
BF39_RS27035	PF00367	phosphotransferase system, EIIB
BF39_RS27040	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS27040	PF13407	Periplasmic binding protein domain
BF39_RS27050	PF00085	Thioredoxin
BF39_RS27055	PF02600	Disulfide bond formation protein DsbB
BF39_RS27060	PF14148	YhdB-like protein
BF39_RS27080	PF03323	Bacillus/Clostridium GerA spore germination protein
BF39_RS27095	PF00881	Nitroreductase family
BF39_RS27100	PF04293	SpoVR like protein
BF39_RS27125	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF39_RS27125	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF39_RS27130	PF02583	Metal-sensitive transcriptional repressor
BF39_RS27135	PF01206	Sulfurtransferase TusA
BF39_RS27135	PF00581	Rhodanese-like domain
BF39_RS27140	PF00581	Rhodanese-like domain
BF39_RS27140	PF00753	Metallo-beta-lactamase superfamily
BF39_RS27145	PF01206	Sulfurtransferase TusA
BF39_RS27150	PF00581	Rhodanese-like domain
BF39_RS27160	PF13686	DsrE/DsrF/DrsH-like family
BF39_RS27165	PF01925	Sulfite exporter TauE/SafE
BF39_RS27175	PF03816	Cell envelope-related transcriptional attenuator domain
BF39_RS27180	PF00107	Zinc-binding dehydrogenase
BF39_RS27180	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS27185	PF02690	Na+/Pi-cotransporter
BF39_RS27190	PF07690	Major Facilitator Superfamily
BF39_RS27200	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BF39_RS27200	PF08279	HTH domain
BF39_RS27200	PF00874	PRD domain
BF39_RS27200	PF05043	Mga helix-turn-helix domain
BF39_RS27205	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BF39_RS27210	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BF39_RS27215	PF02378	Phosphotransferase system, EIIC 
BF39_RS27230	PF06725	3D domain
BF39_RS27230	PF01476	LysM domain
BF39_RS27235	PF12704	MacB-like periplasmic core domain
BF39_RS27235	PF02687	FtsX-like permease family
BF39_RS27240	PF00005	ABC transporter
BF39_RS27250	PF09529	Integral membrane protein (intg_mem_TP0381)
BF39_RS27265	PF05525	Branched-chain amino acid transport protein
BF39_RS27270	PF05067	Manganese containing catalase
BF39_RS27275	PF12652	CotJB protein
BF39_RS27280	PF11007	Spore coat associated protein JA (CotJA)
BF39_RS27295	PF02735	Ku70/Ku80 beta-barrel domain
BF39_RS27305	PF09335	SNARE associated Golgi protein
BF39_RS27340	PF13520	Amino acid permease
BF39_RS27345	PF00999	Sodium/hydrogen exchanger family
BF39_RS27355	PF01380	SIS domain
BF39_RS27355	PF01418	Helix-turn-helix domain, rpiR family
BF39_RS27360	PF01380	SIS domain
BF39_RS27365	PF00367	phosphotransferase system, EIIB
BF39_RS27365	PF02378	Phosphotransferase system, EIIC 
BF39_RS27375	PF07681	DoxX
BF39_RS27390	PF00892	EamA-like transporter family
BF39_RS27395	PF01037	Lrp/AsnC ligand binding domain
BF39_RS27405	PF00893	Small Multidrug Resistance protein
BF39_RS27410	PF00893	Small Multidrug Resistance protein
BF39_RS27415	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS27415	PF17934	Tetracyclin repressor-like, C-terminal domain
BF39_RS27420	PF07690	Major Facilitator Superfamily
BF39_RS27425	PF01638	HxlR-like helix-turn-helix
BF39_RS27435	PF02525	Flavodoxin-like fold
BF39_RS27440	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS27440	PF12793	Sugar transport-related sRNA regulator N-term
BF39_RS27445	PF07690	Major Facilitator Superfamily
BF39_RS27455	PF01965	DJ-1/PfpI family
BF39_RS27460	PF06628	Catalase-related immune-responsive
BF39_RS27460	PF18011	C-terminal domain found in long catalases
BF39_RS27460	PF00199	Catalase
BF39_RS27470	PF13520	Amino acid permease
BF39_RS27475	PF01177	Asp/Glu/Hydantoin racemase
BF39_RS27485	PF00171	Aldehyde dehydrogenase family
BF39_RS27495	PF00005	ABC transporter
BF39_RS27495	PF00664	ABC transporter transmembrane region
BF39_RS27505	PF00497	Bacterial extracellular solute-binding proteins, family 3
BF39_RS27510	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS27515	PF00005	ABC transporter
BF39_RS27520	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF39_RS27530	PF14398	YheC/D like ATP-grasp
BF39_RS27540	PF04286	Protein of unknown function (DUF445)
BF39_RS27545	PF06133	Control of competence regulator ComK, YlbF/YmcA
BF39_RS27560	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF39_RS27560	PF00205	Thiamine pyrophosphate enzyme, central domain
BF39_RS27560	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF39_RS27565	PF03306	Alpha-acetolactate decarboxylase
BF39_RS27575	PF02245	Methylpurine-DNA glycosylase (MPG)
BF39_RS27595	PF04055	Radical SAM superfamily
BF39_RS27600	PF00501	AMP-binding enzyme
BF39_RS27600	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS27610	PF00916	Sulfate permease family
BF39_RS27610	PF01740	STAS domain
BF39_RS27630	PF07516	SecA Wing and Scaffold domain
BF39_RS27630	PF01043	SecA preprotein cross-linking domain
BF39_RS27630	PF07517	SecA DEAD-like domain
BF39_RS27635	PF14667	Polysaccharide biosynthesis C-terminal domain
BF39_RS27635	PF01943	Polysaccharide biosynthesis protein
BF39_RS27645	PF00395	S-layer homology domain
BF39_RS27645	PF02368	Bacterial Ig-like domain (group 2)
BF39_RS27645	PF13205	Bacterial Ig-like domain
BF39_RS27650	PF00395	S-layer homology domain
BF39_RS27660	PF03062	MBOAT, membrane-bound O-acyltransferase family
BF39_RS27665	PF03062	MBOAT, membrane-bound O-acyltransferase family
BF39_RS27680	PF00378	Enoyl-CoA hydratase/isomerase
BF39_RS27700	PF05343	M42 glutamyl aminopeptidase
BF39_RS27705	PF00395	S-layer homology domain
BF39_RS27705	PF01520	N-acetylmuramoyl-L-alanine amidase
BF39_RS27715	PF11121	Protein of unknown function (DUF2639)
BF39_RS27720	PF05544	Proline racemase
BF39_RS27725	PF02423	Ornithine cyclodeaminase/mu-crystallin family
BF39_RS27730	PF18593	CdiI immunity protein
BF39_RS27755	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS27760	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS27765	PF12911	N-terminal TM domain of oligopeptide transport permease C
BF39_RS27765	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS27775	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS27775	PF00005	ABC transporter
BF39_RS27805	PF00083	Sugar (and other) transporter
BF39_RS27810	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS27810	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BF39_RS27815	PF08279	HTH domain
BF39_RS27815	PF12431	Transcriptional regulator 
BF39_RS27815	PF00072	Response regulator receiver domain
BF39_RS27820	PF03401	Tripartite tricarboxylate transporter family receptor
BF39_RS27825	PF02342	TerD domain
BF39_RS27850	PF06445	GyrI-like small molecule binding domain
BF39_RS27850	PF13411	MerR HTH family regulatory protein
BF39_RS27865	PF03796	DnaB-like helicase C terminal domain
BF39_RS27865	PF00772	DnaB-like helicase N terminal domain
BF39_RS27890	PF01925	Sulfite exporter TauE/SafE
BF39_RS27905	PF07690	Major Facilitator Superfamily
BF39_RS27955	PF00550	Phosphopantetheine attachment site
BF39_RS27955	PF07993	Male sterility protein
BF39_RS27960	PF18665	Tetracyclin repressor-like, C-terminal domain
BF39_RS27960	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS27980	PF01066	CDP-alcohol phosphatidyltransferase
BF39_RS28000	PF02733	Dak1 domain
BF39_RS28015	PF02525	Flavodoxin-like fold
BF39_RS28020	PF02082	Transcriptional regulator
BF39_RS28065	PF00395	S-layer homology domain
BF39_RS28090	PF11181	Heat induced stress protein YflT
BF39_RS28095	PF05532	CsbD-like
BF39_RS28110	PF01740	STAS domain
BF39_RS28115	PF13581	Histidine kinase-like ATPase domain
BF39_RS28120	PF04545	Sigma-70, region 4
BF39_RS28120	PF04539	Sigma-70 region 3
BF39_RS28120	PF04542	Sigma-70 region 2 
BF39_RS28130	PF07228	Stage II sporulation protein E (SpoIIE)
BF39_RS28130	PF13426	PAS domain
BF39_RS28135	PF01739	CheR methyltransferase, SAM binding domain
BF39_RS28135	PF03705	CheR methyltransferase, all-alpha domain
BF39_RS28140	PF00072	Response regulator receiver domain
BF39_RS28140	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS28140	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS28140	PF00497	Bacterial extracellular solute-binding proteins, family 3
BF39_RS28140	PF01627	Hpt domain
BF39_RS28165	PF01906	Putative heavy-metal-binding
BF39_RS28180	PF08240	Alcohol dehydrogenase GroES-like domain
BF39_RS28180	PF00107	Zinc-binding dehydrogenase
BF39_RS28185	PF11121	Protein of unknown function (DUF2639)
BF39_RS28200	PF00149	Calcineurin-like phosphoesterase
BF39_RS28205	PF13514	AAA domain
BF39_RS28210	PF12323	Helix-turn-helix domain
BF39_RS28210	PF07282	Putative transposase DNA-binding domain
BF39_RS28210	PF01385	Probable transposase
BF39_RS28220	PF01336	OB-fold nucleic acid binding domain
BF39_RS28220	PF01966	HD domain
BF39_RS28225	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS28230	PF07690	Major Facilitator Superfamily
BF39_RS28235	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS28240	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF39_RS28245	PF18801	response regulator aspartate phosphatase H, N terminal
BF39_RS28250	PF00561	alpha/beta hydrolase fold
BF39_RS28250	PF08386	TAP-like protein
BF39_RS28270	PF04309	Glycerol-3-phosphate responsive antiterminator
BF39_RS28275	PF00230	Major intrinsic protein
BF39_RS28280	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BF39_RS28280	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BF39_RS28285	PF01266	FAD dependent oxidoreductase
BF39_RS28285	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
BF39_RS28300	PF08281	Sigma-70, region 4
BF39_RS28300	PF04542	Sigma-70 region 2 
BF39_RS28325	PF07690	Major Facilitator Superfamily
BF39_RS28330	PF07690	Major Facilitator Superfamily
BF39_RS28340	PF13538	UvrD-like helicase C-terminal domain
BF39_RS28365	PF01047	MarR family
BF39_RS28370	PF12732	YtxH-like protein
BF39_RS28375	PF01230	HIT domain
BF39_RS28380	PF00005	ABC transporter
BF39_RS28385	PF05975	Bacterial ABC transporter protein EcsB
BF39_RS28390	PF12787	EcsC protein family
BF39_RS28395	PF17934	Tetracyclin repressor-like, C-terminal domain
BF39_RS28395	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS28405	PF03703	Bacterial PH domain
BF39_RS28415	PF03703	Bacterial PH domain
BF39_RS28460	PF03703	Bacterial PH domain
BF39_RS28465	PF03703	Bacterial PH domain
BF39_RS28470	PF03992	Antibiotic biosynthesis monooxygenase
BF39_RS28475	PF00905	Penicillin binding protein transpeptidase domain
BF39_RS28475	PF00912	Transglycosylase
BF39_RS28480	PF01208	Uroporphyrinogen decarboxylase (URO-D)
BF39_RS28485	PF00762	Ferrochelatase
BF39_RS28490	PF01593	Flavin containing amine oxidoreductase
BF39_RS28515	PF03965	Penicillinase repressor
BF39_RS28525	PF00440	Bacterial regulatory proteins, tetR family
BF39_RS28525	PF17932	Tetracyclin repressor-like, C-terminal domain
BF39_RS28555	PF00356	Bacterial regulatory proteins, lacI family
BF39_RS28560	PF14149	YhfH-like protein
BF39_RS28565	PF12706	Beta-lactamase superfamily domain
BF39_RS28570	PF03099	Biotin/lipoate A/B protein ligase family
BF39_RS28570	PF10437	Bacterial lipoate protein ligase C-terminus
BF39_RS28580	PF00501	AMP-binding enzyme
BF39_RS28580	PF13193	AMP-binding enzyme C-terminal domain
BF39_RS28590	PF01520	N-acetylmuramoyl-L-alanine amidase
BF39_RS28590	PF00395	S-layer homology domain
BF39_RS28595	PF05593	RHS Repeat
BF39_RS28610	PF05593	RHS Repeat
BF39_RS28645	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
BF39_RS28655	PF00149	Calcineurin-like phosphoesterase
BF39_RS28660	PF01966	HD domain
BF39_RS28670	PF08281	Sigma-70, region 4
BF39_RS28670	PF04542	Sigma-70 region 2 
BF39_RS28675	PF12833	Helix-turn-helix domain
BF39_RS28675	PF06445	GyrI-like small molecule binding domain
BF39_RS28690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF39_RS28690	PF00512	His Kinase A (phospho-acceptor) domain
BF39_RS28695	PF00072	Response regulator receiver domain
BF39_RS28695	PF00486	Transcriptional regulatory protein, C terminal
BF39_RS28720	PF01435	Peptidase family M48
BF39_RS28720	PF16491	CAAX prenyl protease N-terminal, five membrane helices
BF39_RS28725	PF00672	HAMP domain
BF39_RS28725	PF02743	Cache domain
BF39_RS28725	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF39_RS28730	PF00892	EamA-like transporter family
BF39_RS28735	PF00150	Cellulase (glycosyl hydrolase family 5)
BF39_RS28735	PF00395	S-layer homology domain
BF39_RS28735	PF03424	Carbohydrate binding domain (family 17/28)
BF39_RS28745	PF00395	S-layer homology domain
BF39_RS28750	PF01274	Malate synthase
BF39_RS28755	PF00463	Isocitrate lyase family
BF39_RS28765	PF00313	'Cold-shock' DNA-binding domain
BF39_RS28780	PF06338	ComK protein
BF39_RS28785	PF09335	SNARE associated Golgi protein
BF39_RS28790	PF10502	Signal peptidase, peptidase S26 
BF39_RS28800	PF13361	UvrD-like helicase C-terminal domain
BF39_RS28800	PF12705	PD-(D/E)XK nuclease superfamily
BF39_RS28800	PF00580	UvrD/REP helicase N-terminal domain
BF39_RS28810	PF10676	Spore germination protein gerPA/gerPF
BF39_RS28815	PF10970	Spore germination protein GerPE 
BF39_RS28825	PF10737	Spore germination protein GerPC
BF39_RS28830	PF10803	Spore germination GerPB
BF39_RS28835	PF10676	Spore germination protein gerPA/gerPF
BF39_RS28840	PF09388	Spo0E like sporulation regulatory protein
BF39_RS28845	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BF39_RS28855	PF00202	Aminotransferase class-III
BF39_RS28860	PF07457	Protein of unknown function (DUF1516)
BF39_RS28870	PF00733	Asparagine synthase
BF39_RS28870	PF13537	Glutamine amidotransferase domain
BF39_RS28875	PF00762	Ferrochelatase
BF39_RS28880	PF00199	Catalase
BF39_RS28880	PF06628	Catalase-related immune-responsive
BF39_RS28885	PF00909	Ammonium Transporter Family
BF39_RS28895	PF00128	Alpha amylase, catalytic domain
BF39_RS28905	PF04461	Protein of unknown function (DUF520)
BF39_RS28910	PF17783	CvfB-like winged helix domain
BF39_RS28910	PF13509	S1 domain
BF39_RS28920	PF00639	PPIC-type PPIASE domain
BF39_RS28930	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF39_RS28930	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF39_RS28935	PF12758	Protein of unknown function (DUF3813)
BF39_RS28955	PF14168	YjzC-like protein
BF39_RS28960	PF17871	AAA lid domain
BF39_RS28960	PF07724	AAA domain (Cdc48 subfamily)
BF39_RS28960	PF02861	Clp amino terminal domain, pathogenicity island component
BF39_RS28960	PF00004	ATPase family associated with various cellular activities (AAA)
BF39_RS28960	PF10431	C-terminal, D2-small domain, of ClpB protein 
BF39_RS28980	PF10815	ComZ
BF39_RS28985	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BF39_RS28985	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BF39_RS28990	PF02801	Beta-ketoacyl synthase, C-terminal domain
BF39_RS28990	PF00109	Beta-ketoacyl synthase, N-terminal domain
BF39_RS28995	PF10026	Predicted Zn-dependent protease (DUF2268)
BF39_RS29000	PF12227	Protein of unknown function (DUF3603)
BF39_RS29005	PF00579	tRNA synthetases class I (W and Y)
BF39_RS29015	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS29020	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS29025	PF12911	N-terminal TM domain of oligopeptide transport permease C
BF39_RS29025	PF00528	Binding-protein-dependent transport system inner membrane component
BF39_RS29030	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS29030	PF00005	ABC transporter
BF39_RS29035	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF39_RS29035	PF00005	ABC transporter
BF39_RS29040	PF01554	MatE
BF39_RS29045	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF39_RS29060	PF03960	ArsC family
BF39_RS29065	PF03741	Integral membrane protein TerC family
BF39_RS29070	PF05389	Negative regulator of genetic competence (MecA)
BF39_RS29075	PF13396	Phospholipase_D-nuclease N-terminal
BF39_RS29075	PF13091	PLD-like domain
BF39_RS29085	PF08439	Oligopeptidase F
BF39_RS29085	PF01432	Peptidase family M3
BF39_RS29100	PF01152	Bacterial-like globin
BF39_RS29105	PF01928	CYTH domain
BF39_RS29115	PF04607	Region found in RelA / SpoT proteins
BF39_RS29120	PF01513	ATP-NAD kinase
BF39_RS29125	PF00849	RNA pseudouridylate synthase
BF39_RS29135	PF00149	Calcineurin-like phosphoesterase
BF39_RS29140	PF01098	Cell cycle protein
BF39_RS29145	PF00535	Glycosyl transferase family 2
BF39_RS29150	PF08241	Methyltransferase domain
BF39_RS29155	PF05711	Macrocin-O-methyltransferase (TylF)
BF39_RS29165	PF00535	Glycosyl transferase family 2
BF39_RS29165	PF13181	Tetratricopeptide repeat
BF39_RS29185	PF00483	Nucleotidyl transferase
BF39_RS29190	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
BF39_RS29195	PF16363	GDP-mannose 4,6 dehydratase
BF39_RS29200	PF04321	RmlD substrate binding domain
BF39_RS29220	PF07098	Protein of unknown function (DUF1360)
BF39_RS29240	PF13361	UvrD-like helicase C-terminal domain
BF39_RS29240	PF00580	UvrD/REP helicase N-terminal domain
BF39_RS29245	PF13673	Acetyltransferase (GNAT) domain
BF39_RS29255	PF00756	Putative esterase
BF39_RS29270	PF02368	Bacterial Ig-like domain (group 2)
BF39_RS29275	PF00474	Sodium:solute symporter family
BF39_RS29285	PF04715	Anthranilate synthase component I, N terminal region
BF39_RS29285	PF00425	chorismate binding enzyme
BF39_RS29290	PF02885	Glycosyl transferase family, helical bundle domain
BF39_RS29290	PF00117	Glutamine amidotransferase class-I
BF39_RS29290	PF00591	Glycosyl transferase family, a/b domain
BF39_RS29295	PF02885	Glycosyl transferase family, helical bundle domain
BF39_RS29295	PF00591	Glycosyl transferase family, a/b domain
BF39_RS29300	PF00218	Indole-3-glycerol phosphate synthase
BF39_RS29350	PF02733	Dak1 domain
