locus-tag class description BA_0001 PF00308 Bacterial dnaA protein BA_0001 PF08299 Bacterial dnaA protein helix-turn-helix BA_0001 PF11638 DnaA N-terminal domain BA_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BA_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BA_0002 PF02767 DNA polymerase III beta subunit, central domain BA_0004 PF02463 RecF/RecN/SMC N terminal domain BA_0005 PF01751 Toprim domain BA_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_0005 PF00986 DNA gyrase B subunit, carboxyl terminus BA_0005 PF00204 DNA gyrase B BA_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A BA_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller BA_0008 PF00478 IMP dehydrogenase / GMP reductase domain BA_0008 PF00571 CBS domain BA_0009 PF07943 Penicillin-binding protein 5, C-terminal domain BA_0009 PF00768 D-alanyl-D-alanine carboxypeptidase BA_0010 PF01680 SOR/SNZ family BA_0011 PF01174 SNO glutamine amidotransferase family BA_0012 PF02403 Seryl-tRNA synthetase N-terminal domain BA_0012 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA_0014 PF01712 Deoxynucleoside kinase BA_0015 PF01712 Deoxynucleoside kinase BA_0016 PF00857 Isochorismatase family BA_0018 PF14437 MafB19-like deaminase BA_0019 PF12169 DNA polymerase III subunits gamma and tau domain III BA_0020 PF02575 YbaB/EbfC DNA-binding family BA_0021 PF13662 Toprim domain BA_0021 PF02132 RecR protein BA_0022 PF10704 Protein of unknown function (DUF2508) BA_0024 PF07441 SigmaK-factor processing regulatory protein BofA BA_0026 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BA_0026 PF01276 Orn/Lys/Arg decarboxylase, major domain BA_0027 PF02223 Thymidylate kinase BA_0028 PF09115 DNA polymerase III, delta subunit, C terminal BA_0029 PF04468 PSP1 C-terminal conserved region BA_0030 PF06156 Initiation control protein YabA BA_0031 PF05175 Methyltransferase small domain BA_0032 PF01541 GIY-YIG catalytic domain BA_0033 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA_0034 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BA_0034 PF18277 AbrB C-terminal domain BA_0036 PF01588 Putative tRNA binding domain BA_0036 PF09334 tRNA synthetases class I (M) BA_0036 PF08264 Anticodon-binding domain of tRNA BA_0037 PF01026 TatD related DNase BA_0038 PF13662 Toprim domain BA_0038 PF13331 Domain of unknown function (DUF4093) BA_0039 PF00398 Ribosomal RNA adenine dimethylase BA_0040 PF05582 YabG peptidase U57 BA_0041 PF06257 Biofilm formation stimulator VEG BA_0042 PF00269 Small, acid-soluble spore proteins, alpha/beta type BA_0043 PF08544 GHMP kinases C terminal BA_0043 PF00288 GHMP kinases N terminal domain BA_0044 PF09182 Bacterial purine repressor, N-terminal BA_0044 PF00156 Phosphoribosyl transferase domain BA_0046 PF01042 Endoribonuclease L-PSP BA_0047 PF04026 SpoVG BA_0048 PF00132 Bacterial transferase hexapeptide (six repeats) BA_0048 PF00483 Nucleotidyl transferase BA_0049 PF14572 Phosphoribosyl synthetase-associated domain BA_0049 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BA_0050 PF01195 Peptidyl-tRNA hydrolase BA_0052 PF02559 CarD-like/TRCF domain BA_0052 PF17757 UvrB interaction domain BA_0052 PF00270 DEAD/DEAH box helicase BA_0052 PF00271 Helicase conserved C-terminal domain BA_0052 PF03461 TRCF domain BA_0053 PF15714 Stage V sporulation protein T C-terminal, transcription factor BA_0053 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BA_0054 PF14667 Polysaccharide biosynthesis C-terminal domain BA_0054 PF01943 Polysaccharide biosynthesis protein BA_0055 PF03819 MazG nucleotide pyrophosphohydrolase domain BA_0055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA_0056 PF01479 S4 domain BA_0057 PF07873 YabP family BA_0058 PF09578 Spore cortex protein YabQ (Spore_YabQ) BA_0060 PF00575 S1 RNA binding domain BA_0061 PF07228 Stage II sporulation protein E (SpoIIE) BA_0062 PF01171 PP-loop family BA_0062 PF09179 TilS substrate binding domain BA_0062 PF11734 TilS substrate C-terminal domain BA_0063 PF00156 Phosphoribosyl transferase domain BA_0064 PF01434 Peptidase family M41 BA_0064 PF06480 FtsH Extracellular BA_0064 PF00004 ATPase family associated with various cellular activities (AAA) BA_0064 PF17862 AAA+ lid domain BA_0065 PF03309 Type III pantothenate kinase BA_0066 PF01430 Hsp33 protein BA_0067 PF00291 Pyridoxal-phosphate dependent enzyme BA_0068 PF00425 chorismate binding enzyme BA_0068 PF04715 Anthranilate synthase component I, N terminal region BA_0069 PF00117 Glutamine amidotransferase class-I BA_0070 PF01063 Amino-transferase class IV BA_0071 PF00809 Pterin binding enzyme BA_0072 PF02152 Dihydroneopterin aldolase BA_0073 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BA_0074 PF01381 Helix-turn-helix BA_0075 PF01207 Dihydrouridine synthase (Dus) BA_0076 PF01336 OB-fold nucleic acid binding domain BA_0076 PF00152 tRNA synthetases class II (D, K and N) BA_0077 PF17727 CtsR C-terminal dimerization domain BA_0077 PF05848 CtsR N-terminal HTH domain BA_0078 PF02151 UvrB/uvrC motif BA_0079 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BA_0080 PF02861 Clp amino terminal domain, pathogenicity island component BA_0080 PF10431 C-terminal, D2-small domain, of ClpB protein BA_0080 PF00004 ATPase family associated with various cellular activities (AAA) BA_0080 PF17871 AAA lid domain BA_0080 PF07724 AAA domain (Cdc48 subfamily) BA_0081 PF18073 Rubredoxin metal binding domain BA_0082 PF10635 DisA bacterial checkpoint controller linker region BA_0082 PF02457 DisA bacterial checkpoint controller nucleotide-binding BA_0084 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BA_0085 PF02542 YgbB family BA_0086 PF00749 tRNA synthetases class I (E and Q), catalytic domain BA_0088 PF06426 Serine acetyltransferase, N-terminal BA_0088 PF00132 Bacterial transferase hexapeptide (six repeats) BA_0089 PF01406 tRNA synthetases class I (C) catalytic domain BA_0089 PF09190 DALR domain BA_0090 PF00636 Ribonuclease III domain BA_0091 PF08032 RNA 2'-O ribose methyltransferase substrate binding BA_0091 PF00588 SpoU rRNA Methylase family BA_0092 PF05991 YacP-like NYN domain BA_0093 PF08281 Sigma-70, region 4 BA_0093 PF04542 Sigma-70 region 2 BA_0094 PF00471 Ribosomal protein L33 BA_0095 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BA_0096 PF02357 Transcription termination factor nusG BA_0096 PF00467 KOW motif BA_0097 PF00298 Ribosomal protein L11, RNA binding domain BA_0097 PF03946 Ribosomal protein L11, N-terminal domain BA_0098 PF00687 Ribosomal protein L1p/L10e family BA_0099 PF00466 Ribosomal protein L10 BA_0100 PF00542 Ribosomal protein L7/L12 C-terminal domain BA_0100 PF16320 Ribosomal protein L7/L12 dimerisation domain BA_0101 PF05175 Methyltransferase small domain BA_0102 PF04561 RNA polymerase Rpb2, domain 2 BA_0102 PF04565 RNA polymerase Rpb2, domain 3 BA_0102 PF00562 RNA polymerase Rpb2, domain 6 BA_0102 PF04560 RNA polymerase Rpb2, domain 7 BA_0102 PF04563 RNA polymerase beta subunit BA_0102 PF10385 RNA polymerase beta subunit external 1 domain BA_0103 PF04983 RNA polymerase Rpb1, domain 3 BA_0103 PF05000 RNA polymerase Rpb1, domain 4 BA_0103 PF04997 RNA polymerase Rpb1, domain 1 BA_0103 PF04998 RNA polymerase Rpb1, domain 5 BA_0103 PF00623 RNA polymerase Rpb1, domain 2 BA_0104 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BA_0105 PF00164 Ribosomal protein S12/S23 BA_0106 PF00177 Ribosomal protein S7p/S5e BA_0107 PF00679 Elongation factor G C-terminus BA_0107 PF14492 Elongation Factor G, domain II BA_0107 PF03764 Elongation factor G, domain IV BA_0107 PF03144 Elongation factor Tu domain 2 BA_0107 PF00009 Elongation factor Tu GTP binding domain BA_0108 PF03144 Elongation factor Tu domain 2 BA_0108 PF00009 Elongation factor Tu GTP binding domain BA_0108 PF03143 Elongation factor Tu C-terminal domain BA_0109 PF00338 Ribosomal protein S10p/S20e BA_0110 PF00297 Ribosomal protein L3 BA_0111 PF00573 Ribosomal protein L4/L1 family BA_0112 PF00276 Ribosomal protein L23 BA_0113 PF03947 Ribosomal Proteins L2, C-terminal domain BA_0113 PF00181 Ribosomal Proteins L2, RNA binding domain BA_0114 PF00203 Ribosomal protein S19 BA_0115 PF00237 Ribosomal protein L22p/L17e BA_0116 PF07650 KH domain BA_0116 PF00189 Ribosomal protein S3, C-terminal domain BA_0117 PF00252 Ribosomal protein L16p/L10e BA_0118 PF00831 Ribosomal L29 protein BA_0119 PF00366 Ribosomal protein S17 BA_0120 PF00238 Ribosomal protein L14p/L23e BA_0121 PF00467 KOW motif BA_0121 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BA_0122 PF00673 ribosomal L5P family C-terminus BA_0122 PF00281 Ribosomal protein L5 BA_0123 PF00253 Ribosomal protein S14p/S29e BA_0124 PF00410 Ribosomal protein S8 BA_0125 PF00347 Ribosomal protein L6 BA_0126 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BA_0127 PF00333 Ribosomal protein S5, N-terminal domain BA_0127 PF03719 Ribosomal protein S5, C-terminal domain BA_0128 PF00327 Ribosomal protein L30p/L7e BA_0129 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BA_0130 PF00344 SecY translocase BA_0131 PF05191 Adenylate kinase, active site lid BA_0132 PF00557 Metallopeptidase family M24 BA_0133 PF01176 Translation initiation factor 1A / IF-1 BA_0134 PF00444 Ribosomal protein L36 BA_0135 PF00416 Ribosomal protein S13/S18 BA_0136 PF00411 Ribosomal protein S11 BA_0137 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BA_0137 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BA_0137 PF01000 RNA polymerase Rpb3/RpoA insert domain BA_0138 PF01196 Ribosomal protein L17 BA_0139 PF00005 ABC transporter BA_0140 PF00005 ABC transporter BA_0141 PF02361 Cobalt transport protein BA_0142 PF01416 tRNA pseudouridine synthase BA_0143 PF00572 Ribosomal protein L13 BA_0144 PF00380 Ribosomal protein S9/S16 BA_0146 PF01520 N-acetylmuramoyl-L-alanine amidase BA_0147 PF10609 NUBPL iron-transfer P-loop NTPase BA_0148 PF17898 Spore germination GerD central core domain BA_0149 PF14089 KinB-signalling pathway activation in sporulation BA_0150 PF01522 Polysaccharide deacetylase BA_0154 PF00491 Arginase family BA_0155 PF02457 DisA bacterial checkpoint controller nucleotide-binding BA_0156 PF07949 YbbR-like protein BA_0157 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA_0157 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA_0157 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA_0157 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA_0159 PF01380 SIS domain BA_0160 PF00561 alpha/beta hydrolase fold BA_0161 PF07729 FCD domain BA_0161 PF00392 Bacterial regulatory proteins, gntR family BA_0163 PF02447 GntP family permease BA_0164 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BA_0164 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA_0165 PF00326 Prolyl oligopeptidase family BA_0165 PF07676 WD40-like Beta Propeller Repeat BA_0173 PF00528 Binding-protein-dependent transport system inner membrane component BA_0174 PF00005 ABC transporter BA_0174 PF09383 NIL domain BA_0175 PF03180 NLPA lipoprotein BA_0176 PF00107 Zinc-binding dehydrogenase BA_0176 PF08240 Alcohol dehydrogenase GroES-like domain BA_0178 PF01565 FAD binding domain BA_0179 PF07690 Major Facilitator Superfamily BA_0181 PF07690 Major Facilitator Superfamily BA_0185 PF00528 Binding-protein-dependent transport system inner membrane component BA_0186 PF00528 Binding-protein-dependent transport system inner membrane component BA_0186 PF12911 N-terminal TM domain of oligopeptide transport permease C BA_0187 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA_0187 PF00005 ABC transporter BA_0188 PF00005 ABC transporter BA_0188 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA_0189 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_0191 PF12833 Helix-turn-helix domain BA_0194 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_0195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_0196 PF00248 Aldo/keto reductase family BA_0197 PF03807 NADP oxidoreductase coenzyme F420-dependent BA_0197 PF14748 Pyrroline-5-carboxylate reductase dimerisation BA_0199 PF04973 Nicotinamide mononucleotide transporter BA_0200 PF06800 Sugar transport protein BA_0202 PF00528 Binding-protein-dependent transport system inner membrane component BA_0205 PF12728 Helix-turn-helix domain BA_0205 PF12727 PBP superfamily domain BA_0208 PF03466 LysR substrate binding domain BA_0208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_0210 PF00892 EamA-like transporter family BA_0211 PF14142 YrzO-like protein BA_0213 PF01553 Acyltransferase BA_0216 PF00356 Bacterial regulatory proteins, lacI family BA_0216 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BA_0218 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_0218 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA_0222 PF01026 TatD related DNase BA_0223 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BA_0228 PF12848 ABC transporter BA_0228 PF00005 ABC transporter BA_0228 PF16326 ABC transporter C-terminal domain BA_0231 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_0232 PF00528 Binding-protein-dependent transport system inner membrane component BA_0233 PF12911 N-terminal TM domain of oligopeptide transport permease C BA_0233 PF00528 Binding-protein-dependent transport system inner membrane component BA_0234 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA_0234 PF00005 ABC transporter BA_0235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA_0235 PF00005 ABC transporter BA_0240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_0241 PF01557 Fumarylacetoacetate (FAA) hydrolase family BA_0244 PF07690 Major Facilitator Superfamily BA_0246 PF01225 Mur ligase family, catalytic domain BA_0246 PF08245 Mur ligase middle domain BA_0246 PF02875 Mur ligase family, glutamate ligase domain BA_0247 PF00270 DEAD/DEAH box helicase BA_0247 PF00271 Helicase conserved C-terminal domain BA_0248 PF03851 UV-endonuclease UvdE BA_0249 PF01694 Rhomboid family BA_0250 PF01648 4'-phosphopantetheinyl transferase superfamily BA_0252 PF01168 Alanine racemase, N-terminal domain BA_0252 PF00842 Alanine racemase, C-terminal domain BA_0253 PF01402 Ribbon-helix-helix protein, copG family BA_0254 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BA_0255 PF00575 S1 RNA binding domain BA_0255 PF16921 Tex protein YqgF-like domain BA_0255 PF17674 HHH domain BA_0255 PF09371 Tex-like protein N-terminal domain BA_0257 PF17283 SprT-like zinc ribbon domain BA_0257 PF10263 SprT-like family BA_0258 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BA_0259 PF00814 Glycoprotease family BA_0260 PF00583 Acetyltransferase (GNAT) family BA_0261 PF00814 Glycoprotease family BA_0262 PF12848 ABC transporter BA_0262 PF00005 ABC transporter BA_0262 PF16326 ABC transporter C-terminal domain BA_0263 PF06971 Putative DNA-binding protein N-terminus BA_0263 PF02629 CoA binding domain BA_0265 PF02517 CPBP intramembrane metalloprotease BA_0266 PF00166 Chaperonin 10 Kd subunit BA_0267 PF00118 TCP-1/cpn60 chaperonin family BA_0268 PF00958 GMP synthase C terminal domain BA_0268 PF02540 NAD synthase BA_0268 PF00117 Glutamine amidotransferase class-I BA_0270 PF00860 Permease family BA_0271 PF00072 Response regulator receiver domain BA_0271 PF00486 Transcriptional regulatory protein, C terminal BA_0272 PF00989 PAS fold BA_0272 PF00512 His Kinase A (phospho-acceptor) domain BA_0272 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_0272 PF16736 Single Cache-like BA_0273 PF05045 Rhamnan synthesis protein F BA_0273 PF14307 Glycosyltransferase WbsX BA_0275 PF08241 Methyltransferase domain BA_0280 PF00535 Glycosyl transferase family 2 BA_0283 PF02673 Bacitracin resistance protein BacA BA_0285 PF00005 ABC transporter BA_0286 PF00512 His Kinase A (phospho-acceptor) domain BA_0286 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_0287 PF00486 Transcriptional regulatory protein, C terminal BA_0287 PF00072 Response regulator receiver domain BA_0288 PF00731 AIR carboxylase BA_0289 PF02222 ATP-grasp domain BA_0289 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BA_0290 PF10397 Adenylosuccinate lyase C-terminus BA_0290 PF00206 Lyase BA_0291 PF01259 SAICAR synthetase BA_0292 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BA_0294 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BA_0294 PF02769 AIR synthase related protein, C-terminal domain BA_0294 PF00586 AIR synthase related protein, N-terminal domain BA_0295 PF00156 Phosphoribosyl transferase domain BA_0296 PF00586 AIR synthase related protein, N-terminal domain BA_0296 PF02769 AIR synthase related protein, C-terminal domain BA_0297 PF00551 Formyl transferase BA_0298 PF01808 AICARFT/IMPCHase bienzyme BA_0298 PF02142 MGS-like domain BA_0299 PF02844 Phosphoribosylglycinamide synthetase, N domain BA_0299 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BA_0299 PF02843 Phosphoribosylglycinamide synthetase, C domain BA_0304 PF01884 PcrB family BA_0305 PF00580 UvrD/REP helicase N-terminal domain BA_0305 PF13361 UvrD-like helicase C-terminal domain BA_0306 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BA_0306 PF03120 NAD-dependent DNA ligase OB-fold domain BA_0306 PF12826 Helix-hairpin-helix motif BA_0306 PF01653 NAD-dependent DNA ligase adenylation domain BA_0306 PF00533 BRCA1 C Terminus (BRCT) domain BA_0307 PF07537 CamS sex pheromone cAM373 precursor BA_0308 PF01925 Sulfite exporter TauE/SafE BA_0309 PF00171 Aldehyde dehydrogenase family BA_0311 PF00857 Isochorismatase family BA_0312 PF09383 NIL domain BA_0312 PF00005 ABC transporter BA_0313 PF00528 Binding-protein-dependent transport system inner membrane component BA_0314 PF03180 NLPA lipoprotein BA_0318 PF01047 MarR family BA_0320 PF02686 Glu-tRNAGln amidotransferase C subunit BA_0321 PF01425 Amidase BA_0322 PF02934 GatB/GatE catalytic domain BA_0322 PF02637 GatB domain BA_0323 PF00781 Diacylglycerol kinase catalytic domain BA_0324 PF13419 Haloacid dehalogenase-like hydrolase BA_0325 PF00202 Aminotransferase class-III BA_0326 PF00158 Sigma-54 interaction domain BA_0327 PF00171 Aldehyde dehydrogenase family BA_0328 PF00893 Small Multidrug Resistance protein BA_0329 PF02073 Thermophilic metalloprotease (M29) BA_0332 PF07670 Nucleoside recognition BA_0332 PF01773 Na+ dependent nucleoside transporter N-terminus BA_0332 PF07662 Na+ dependent nucleoside transporter C-terminus BA_0333 PF01938 TRAM domain BA_0333 PF05958 tRNA (Uracil-5-)-methyltransferase BA_0333 PF02475 Met-10+ like-protein BA_0334 PF01207 Dihydrouridine synthase (Dus) BA_0336 PF07308 Protein of unknown function (DUF1456) BA_0339 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BA_0339 PF13378 Enolase C-terminal domain-like BA_0341 PF03553 Na+/H+ antiporter family BA_0342 PF01546 Peptidase family M20/M25/M40 BA_0342 PF07687 Peptidase dimerisation domain BA_0344 PF13192 Thioredoxin domain BA_0344 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_0345 PF00578 AhpC/TSA family BA_0346 PF01636 Phosphotransferase enzyme family BA_0347 PF01008 Initiation factor 2 subunit family BA_0348 PF00596 Class II Aldolase and Adducin N-terminal domain BA_0349 PF01032 FecCD transport family BA_0350 PF01032 FecCD transport family BA_0351 PF01497 Periplasmic binding protein BA_0352 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_0354 PF12728 Helix-turn-helix domain BA_0363 PF10127 RNA repair pathway DNA polymerase beta family BA_0364 PF07690 Major Facilitator Superfamily BA_0365 PF01266 FAD dependent oxidoreductase BA_0365 PF00355 Rieske [2Fe-2S] domain BA_0368 PF00005 ABC transporter BA_0369 PF12729 Four helix bundle sensory module for signal transduction BA_0369 PF00672 HAMP domain BA_0369 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_0370 PF00672 HAMP domain BA_0370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_0370 PF12729 Four helix bundle sensory module for signal transduction BA_0371 PF16657 Maltogenic Amylase, C-terminal domain BA_0371 PF00128 Alpha amylase, catalytic domain BA_0372 PF02378 Phosphotransferase system, EIIC BA_0372 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA_0372 PF00367 phosphotransferase system, EIIB BA_0373 PF03372 Endonuclease/Exonuclease/phosphatase family BA_0374 PF01061 ABC-2 type transporter BA_0375 PF01131 DNA topoisomerase BA_0375 PF01751 Toprim domain BA_0376 PF02110 Hydroxyethylthiazole kinase family BA_0377 PF02581 Thiamine monophosphate synthase BA_0378 PF03605 Anaerobic c4-dicarboxylate membrane transporter BA_0379 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_0379 PF00672 HAMP domain BA_0380 PF01910 Thiamine-binding protein BA_0381 PF00528 Binding-protein-dependent transport system inner membrane component BA_0383 PF00005 ABC transporter BA_0384 PF12848 ABC transporter BA_0384 PF00005 ABC transporter BA_0385 PF00041 Fibronectin type III domain BA_0385 PF00704 Glycosyl hydrolases family 18 BA_0389 PF00440 Bacterial regulatory proteins, tetR family BA_0389 PF08360 QacR-like protein, C-terminal region BA_0393 PF11700 Vacuole effluxer Atg22 like BA_0396 PF09180 Prolyl-tRNA synthetase, C-terminal BA_0396 PF03129 Anticodon binding domain BA_0396 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA_0398 PF00480 ROK family BA_0399 PF02342 TerD domain BA_0400 PF02342 TerD domain BA_0401 PF02342 TerD domain BA_0402 PF03741 Integral membrane protein TerC family BA_0403 PF14266 Putative component of 'biosynthetic module' BA_0404 PF05816 Toxic anion resistance protein (TelA) BA_0405 PF00689 Cation transporting ATPase, C-terminus BA_0405 PF00690 Cation transporter/ATPase, N-terminus BA_0406 PF06569 Protein of unknown function (DUF1128) BA_0407 PF01451 Low molecular weight phosphotyrosine protein phosphatase BA_0409 PF03631 Virulence factor BrkB BA_0411 PF00892 EamA-like transporter family BA_0415 PF09335 SNARE associated Golgi protein BA_0418 PF16242 Pyridoxamine 5'-phosphate oxidase like BA_0419 PF01699 Sodium/calcium exchanger protein BA_0420 PF14167 YfkD-like protein BA_0421 PF08756 YfkB-like domain BA_0421 PF04055 Radical SAM superfamily BA_0423 PF05681 Fumarate hydratase (Fumerase) BA_0423 PF05683 Fumarase C-terminus BA_0424 PF01522 Polysaccharide deacetylase BA_0426 PF05958 tRNA (Uracil-5-)-methyltransferase BA_0426 PF01938 TRAM domain BA_0427 PF14659 Phage integrase, N-terminal SAM-like domain BA_0427 PF00589 Phage integrase family BA_0428 PF01381 Helix-turn-helix BA_0432 PF01381 Helix-turn-helix BA_0439 PF07319 Primosomal protein DnaI N-terminus BA_0439 PF01695 IstB-like ATP binding protein BA_0487 PF01416 tRNA pseudouridine synthase BA_0489 PF00158 Sigma-54 interaction domain BA_0489 PF13426 PAS domain BA_0489 PF02954 Bacterial regulatory protein, Fis family BA_0492 PF00324 Amino acid permease BA_0493 PF07687 Peptidase dimerisation domain BA_0493 PF01546 Peptidase family M20/M25/M40 BA_0499 PF04960 Glutaminase BA_0501 PF02378 Phosphotransferase system, EIIC BA_0501 PF00367 phosphotransferase system, EIIB BA_0502 PF00144 Beta-lactamase BA_0505 PF00535 Glycosyl transferase family 2 BA_0507 PF00551 Formyl transferase BA_0507 PF02911 Formyl transferase, C-terminal domain BA_0507 PF01370 NAD dependent epimerase/dehydratase family BA_0508 PF00535 Glycosyl transferase family 2 BA_0509 PF01228 Glycine radical BA_0509 PF02901 Pyruvate formate lyase-like BA_0510 PF04055 Radical SAM superfamily BA_0511 PF04101 Glycosyltransferase family 28 C-terminal domain BA_0511 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BA_0514 PF01979 Amidohydrolase family BA_0515 PF01370 NAD dependent epimerase/dehydratase family BA_0515 PF08338 Domain of unknown function (DUF1731) BA_0516 PF02631 RecX family BA_0519 PF08176 Small acid-soluble spore protein K family BA_0520 PF14043 WVELL protein BA_0521 PF04307 LexA-binding, inner membrane-associated putative hydrolase BA_0522 PF14815 NUDIX domain BA_0522 PF00730 HhH-GPD superfamily base excision DNA repair protein BA_0524 PF04259 Small, acid-soluble spore protein, gamma-type BA_0526 PF14182 YgaB-like protein BA_0527 PF04167 Protein of unknown function (DUF402) BA_0528 PF00664 ABC transporter transmembrane region BA_0528 PF00005 ABC transporter BA_0529 PF06081 Aromatic acid exporter family member 1 BA_0530 PF01645 Conserved region in glutamate synthase BA_0530 PF04898 Glutamate synthase central domain BA_0530 PF01493 GXGXG motif BA_0530 PF00310 Glutamine amidotransferases class-II BA_0531 PF00202 Aminotransferase class-III BA_0532 PF00005 ABC transporter BA_0535 PF07885 Ion channel BA_0536 PF00578 AhpC/TSA family BA_0537 PF01475 Ferric uptake regulator family BA_0538 PF11023 Zinc-ribbon containing domain BA_0541 PF01709 Transcriptional regulator BA_0542 PF13344 Haloacid dehalogenase-like hydrolase BA_0542 PF00293 NUDIX domain BA_0543 PF00905 Penicillin binding protein transpeptidase domain BA_0543 PF00912 Transglycosylase BA_0544 PF13462 Thioredoxin BA_0545 PF08331 Domain of unknown function (DUF1730) BA_0546 PF12671 Putative amidase domain BA_0547 PF00588 SpoU rRNA Methylase family BA_0548 PF00990 Diguanylate cyclase, GGDEF domain BA_0548 PF00563 EAL domain BA_0548 PF03707 Bacterial signalling protein N terminal repeat BA_0550 PF06798 PrkA serine protein kinase C-terminal domain BA_0550 PF08298 PrkA AAA domain BA_0551 PF04285 Protein of unknown function (DUF444) BA_0554 PF02028 BCCT, betaine/carnitine/choline family transporter BA_0555 PF18496 Collagenase G catalytic helper subdomain BA_0555 PF01752 Collagenase BA_0555 PF08453 Peptidase family M9 N-terminal BA_0557 PF15975 Flotillin BA_0557 PF01145 SPFH domain / Band 7 family BA_0558 PF02743 Cache domain BA_0558 PF00672 HAMP domain BA_0558 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_0559 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BA_0559 PF00989 PAS fold BA_0559 PF17203 Single cache domain 3 BA_0559 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_0561 PF03600 Citrate transporter BA_0565 PF04309 Glycerol-3-phosphate responsive antiterminator BA_0566 PF17912 MalK OB fold domain BA_0566 PF00005 ABC transporter BA_0567 PF00528 Binding-protein-dependent transport system inner membrane component BA_0568 PF00528 Binding-protein-dependent transport system inner membrane component BA_0569 PF13416 Bacterial extracellular solute-binding protein BA_0570 PF00149 Calcineurin-like phosphoesterase BA_0571 PF00486 Transcriptional regulatory protein, C terminal BA_0571 PF00072 Response regulator receiver domain BA_0572 PF00512 His Kinase A (phospho-acceptor) domain BA_0572 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_0574 PF13529 Peptidase_C39 like family BA_0575 PF00672 HAMP domain BA_0575 PF02743 Cache domain BA_0575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_0576 PF17203 Single cache domain 3 BA_0576 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BA_0576 PF00989 PAS fold BA_0576 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_0577 PF00072 Response regulator receiver domain BA_0578 PF03390 2-hydroxycarboxylate transporter family BA_0579 PF03949 Malic enzyme, NAD binding domain BA_0579 PF00390 Malic enzyme, N-terminal domain BA_0581 PF00892 EamA-like transporter family BA_0582 PF00155 Aminotransferase class I and II BA_0582 PF00392 Bacterial regulatory proteins, gntR family BA_0584 PF00989 PAS fold BA_0584 PF00512 His Kinase A (phospho-acceptor) domain BA_0584 PF18698 Histidine kinase sensor domain BA_0584 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_0584 PF00672 HAMP domain BA_0585 PF00486 Transcriptional regulatory protein, C terminal BA_0585 PF00072 Response regulator receiver domain BA_0587 PF00583 Acetyltransferase (GNAT) family BA_0587 PF13508 Acetyltransferase (GNAT) domain BA_0588 PF02634 FdhD/NarQ family BA_0589 PF01568 Molydopterin dinucleotide binding domain BA_0589 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BA_0589 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA_0589 PF00037 4Fe-4S binding domain BA_0589 PF00384 Molybdopterin oxidoreductase BA_0592 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BA_0592 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BA_0593 PF13520 Amino acid permease BA_0594 PF01022 Bacterial regulatory protein, arsR family BA_0595 PF00403 Heavy-metal-associated domain BA_0596 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BA_0596 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BA_0596 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BA_0599 PF03413 Peptidase propeptide and YPEB domain BA_0599 PF02868 Thermolysin metallopeptidase, alpha-helical domain BA_0599 PF07504 Fungalysin/Thermolysin Propeptide Motif BA_0599 PF01447 Thermolysin metallopeptidase, catalytic domain BA_0604 PF04294 VanW like protein BA_0605 PF03816 Cell envelope-related transcriptional attenuator domain BA_0606 PF07662 Na+ dependent nucleoside transporter C-terminus BA_0606 PF01773 Na+ dependent nucleoside transporter N-terminus BA_0607 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_0608 PF01595 Cyclin M transmembrane N-terminal domain BA_0608 PF03471 Transporter associated domain BA_0608 PF00571 CBS domain BA_0609 PF10415 Fumarase C C-terminus BA_0609 PF00206 Lyase BA_0610 PF02652 L-lactate permease BA_0612 PF01022 Bacterial regulatory protein, arsR family BA_0613 PF08141 Small acid-soluble spore protein H family BA_0614 PF00854 POT family BA_0615 PF01497 Periplasmic binding protein BA_0616 PF01032 FecCD transport family BA_0617 PF01032 FecCD transport family BA_0618 PF00005 ABC transporter BA_0619 PF08241 Methyltransferase domain BA_0620 PF00155 Aminotransferase class I and II BA_0621 PF01370 NAD dependent epimerase/dehydratase family BA_0622 PF00293 NUDIX domain BA_0622 PF13344 Haloacid dehalogenase-like hydrolase BA_0623 PF00092 von Willebrand factor type A domain BA_0624 PF07728 AAA domain (dynein-related subfamily) BA_0625 PF13091 PLD-like domain BA_0625 PF13396 Phospholipase_D-nuclease N-terminal BA_0628 PF03707 Bacterial signalling protein N terminal repeat BA_0628 PF00990 Diguanylate cyclase, GGDEF domain BA_0628 PF00563 EAL domain BA_0629 PF13520 Amino acid permease BA_0630 PF07702 UTRA domain BA_0630 PF00392 Bacterial regulatory proteins, gntR family BA_0631 PF02378 Phosphotransferase system, EIIC BA_0631 PF00367 phosphotransferase system, EIIB BA_0632 PF16657 Maltogenic Amylase, C-terminal domain BA_0632 PF00128 Alpha amylase, catalytic domain BA_0635 PF03323 Bacillus/Clostridium GerA spore germination protein BA_0637 PF01636 Phosphotransferase enzyme family BA_0638 PF01235 Sodium:alanine symporter family BA_0639 PF00005 ABC transporter BA_0640 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA_0641 PF00528 Binding-protein-dependent transport system inner membrane component BA_0642 PF00528 Binding-protein-dependent transport system inner membrane component BA_0643 PF00324 Amino acid permease BA_0648 PF08279 HTH domain BA_0648 PF13280 WYL domain BA_0649 PF01872 RibD C-terminal domain BA_0650 PF00512 His Kinase A (phospho-acceptor) domain BA_0650 PF18698 Histidine kinase sensor domain BA_0650 PF00672 HAMP domain BA_0650 PF00989 PAS fold BA_0650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_0651 PF00486 Transcriptional regulatory protein, C terminal BA_0651 PF00072 Response regulator receiver domain BA_0653 PF01740 STAS domain BA_0653 PF00916 Sulfate permease family BA_0654 PF00582 Universal stress protein family BA_0656 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_0657 PF00528 Binding-protein-dependent transport system inner membrane component BA_0658 PF00528 Binding-protein-dependent transport system inner membrane component BA_0659 PF00005 ABC transporter BA_0659 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA_0661 PF07690 Major Facilitator Superfamily BA_0662 PF01047 MarR family BA_0664 PF00356 Bacterial regulatory proteins, lacI family BA_0665 PF00294 pfkB family carbohydrate kinase BA_0666 PF05025 RbsD / FucU transport protein family BA_0667 PF00005 ABC transporter BA_0668 PF02653 Branched-chain amino acid transport system / permease component BA_0669 PF13407 Periplasmic binding protein domain BA_0670 PF00923 Transaldolase/Fructose-6-phosphate aldolase BA_0672 PF05547 Immune inhibitor A peptidase M6 BA_0675 PF08240 Alcohol dehydrogenase GroES-like domain BA_0675 PF00107 Zinc-binding dehydrogenase BA_0677 PF00882 Zinc dependent phospholipase C BA_0678 PF03372 Endonuclease/Exonuclease/phosphatase family BA_0683 PF02673 Bacitracin resistance protein BacA BA_0684 PF02743 Cache domain BA_0684 PF00672 HAMP domain BA_0684 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_0685 PF01476 LysM domain BA_0685 PF06725 3D domain BA_0686 PF01381 Helix-turn-helix BA_0688 PF04203 Sortase domain BA_0689 PF00854 POT family BA_0690 PF05525 Branched-chain amino acid transport protein BA_0693 PF00324 Amino acid permease BA_0694 PF00860 Permease family BA_0699 PF02254 TrkA-N domain BA_0699 PF02080 TrkA-C domain BA_0699 PF00999 Sodium/hydrogen exchanger family BA_0701 PF00510 Cytochrome c oxidase subunit III BA_0702 PF00115 Cytochrome C and Quinol oxidase polypeptide I BA_0703 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BA_0704 PF00324 Amino acid permease BA_0705 PF13529 Peptidase_C39 like family BA_0706 PF01546 Peptidase family M20/M25/M40 BA_0706 PF07687 Peptidase dimerisation domain BA_0707 PF11755 Protein of unknown function (DUF3311) BA_0708 PF00474 Sodium:solute symporter family BA_0709 PF03323 Bacillus/Clostridium GerA spore germination protein BA_0710 PF03845 Spore germination protein BA_0711 PF05504 Spore germination B3/ GerAC like, C-terminal BA_0714 PF04023 FeoA domain BA_0714 PF07664 Ferrous iron transport protein B C terminus BA_0714 PF07670 Nucleoside recognition BA_0714 PF02421 Ferrous iron transport protein B BA_0714 PF17910 FeoB cytosolic helical domain BA_0715 PF12849 PBP superfamily domain BA_0716 PF00528 Binding-protein-dependent transport system inner membrane component BA_0717 PF00528 Binding-protein-dependent transport system inner membrane component BA_0719 PF00873 AcrB/AcrD/AcrF family BA_0720 PF00571 CBS domain BA_0724 PF08239 Bacterial SH3 domain BA_0724 PF00246 Zinc carboxypeptidase BA_0725 PF03070 TENA/THI-4/PQQC family BA_0726 PF00005 ABC transporter BA_0727 PF00528 Binding-protein-dependent transport system inner membrane component BA_0728 PF09084 NMT1/THI5 like BA_0729 PF02581 Thiamine monophosphate synthase BA_0730 PF01266 FAD dependent oxidoreductase BA_0731 PF02597 ThiS family BA_0732 PF05690 Thiazole biosynthesis protein ThiG BA_0733 PF00899 ThiF family BA_0734 PF08543 Phosphomethylpyrimidine kinase BA_0739 PF03814 Potassium-transporting ATPase A subunit BA_0741 PF02669 K+-transporting ATPase, c chain BA_0742 PF02702 Osmosensitive K+ channel His kinase sensor domain BA_0743 PF07690 Major Facilitator Superfamily BA_0744 PF01047 MarR family BA_0747 PF00860 Permease family BA_0752 PF00294 pfkB family carbohydrate kinase BA_0753 PF08244 Glycosyl hydrolases family 32 C terminal BA_0753 PF00251 Glycosyl hydrolases family 32 N-terminal domain BA_0754 PF02378 Phosphotransferase system, EIIC BA_0754 PF00367 phosphotransferase system, EIIB BA_0755 PF13407 Periplasmic binding protein domain BA_0755 PF00356 Bacterial regulatory proteins, lacI family BA_0757 PF00085 Thioredoxin BA_0758 PF02600 Disulfide bond formation protein DsbB BA_0759 PF14148 YhdB-like protein BA_0763 PF03323 Bacillus/Clostridium GerA spore germination protein BA_0766 PF00881 Nitroreductase family BA_0767 PF04293 SpoVR like protein BA_0774 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_0774 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA_0775 PF02583 Metal-sensitive transcriptional repressor BA_0776 PF01206 Sulfurtransferase TusA BA_0776 PF00581 Rhodanese-like domain BA_0777 PF00581 Rhodanese-like domain BA_0777 PF00753 Metallo-beta-lactamase superfamily BA_0778 PF01206 Sulfurtransferase TusA BA_0779 PF00581 Rhodanese-like domain BA_0781 PF01925 Sulfite exporter TauE/SafE BA_0783 PF03816 Cell envelope-related transcriptional attenuator domain BA_0784 PF00107 Zinc-binding dehydrogenase BA_0784 PF08240 Alcohol dehydrogenase GroES-like domain BA_0785 PF02690 Na+/Pi-cotransporter BA_0787 PF07690 Major Facilitator Superfamily BA_0790 PF00874 PRD domain BA_0790 PF05043 Mga helix-turn-helix domain BA_0790 PF08279 HTH domain BA_0790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA_0791 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BA_0792 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA_0793 PF02378 Phosphotransferase system, EIIC BA_0796 PF06725 3D domain BA_0796 PF01476 LysM domain BA_0797 PF02687 FtsX-like permease family BA_0797 PF12704 MacB-like periplasmic core domain BA_0798 PF00005 ABC transporter BA_0800 PF09529 Integral membrane protein (intg_mem_TP0381) BA_0802 PF05525 Branched-chain amino acid transport protein BA_0803 PF05067 Manganese containing catalase BA_0804 PF12652 CotJB protein BA_0805 PF11007 Spore coat associated protein JA (CotJA) BA_0808 PF02735 Ku70/Ku80 beta-barrel domain BA_0810 PF09335 SNARE associated Golgi protein BA_0818 PF13520 Amino acid permease BA_0819 PF00999 Sodium/hydrogen exchanger family BA_0821 PF01380 SIS domain BA_0821 PF01418 Helix-turn-helix domain, rpiR family BA_0822 PF01380 SIS domain BA_0823 PF00367 phosphotransferase system, EIIB BA_0823 PF02378 Phosphotransferase system, EIIC BA_0825 PF07681 DoxX BA_0829 PF00892 EamA-like transporter family BA_0830 PF01037 Lrp/AsnC ligand binding domain BA_0832 PF00893 Small Multidrug Resistance protein BA_0833 PF00893 Small Multidrug Resistance protein BA_0834 PF00440 Bacterial regulatory proteins, tetR family BA_0834 PF17934 Tetracyclin repressor-like, C-terminal domain BA_0835 PF07690 Major Facilitator Superfamily BA_0836 PF01638 HxlR-like helix-turn-helix BA_0838 PF02525 Flavodoxin-like fold BA_0839 PF12793 Sugar transport-related sRNA regulator N-term BA_0839 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_0840 PF07690 Major Facilitator Superfamily BA_0842 PF01965 DJ-1/PfpI family BA_0843 PF00199 Catalase BA_0843 PF06628 Catalase-related immune-responsive BA_0843 PF18011 C-terminal domain found in long catalases BA_0845 PF13520 Amino acid permease BA_0847 PF01177 Asp/Glu/Hydantoin racemase BA_0849 PF00171 Aldehyde dehydrogenase family BA_0852 PF00005 ABC transporter BA_0852 PF00664 ABC transporter transmembrane region BA_0855 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA_0856 PF00528 Binding-protein-dependent transport system inner membrane component BA_0857 PF00005 ABC transporter BA_0858 PF00269 Small, acid-soluble spore proteins, alpha/beta type BA_0860 PF14398 YheC/D like ATP-grasp BA_0862 PF04286 Protein of unknown function (DUF445) BA_0863 PF06133 Control of competence regulator ComK, YlbF/YmcA BA_0866 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA_0866 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA_0866 PF00205 Thiamine pyrophosphate enzyme, central domain BA_0867 PF03306 Alpha-acetolactate decarboxylase BA_0869 PF02245 Methylpurine-DNA glycosylase (MPG) BA_0872 PF01471 Putative peptidoglycan binding domain BA_0872 PF01510 N-acetylmuramoyl-L-alanine amidase BA_0872 PF01476 LysM domain BA_0875 PF04055 Radical SAM superfamily BA_0876 PF00501 AMP-binding enzyme BA_0876 PF13193 AMP-binding enzyme C-terminal domain BA_0878 PF00916 Sulfate permease family BA_0878 PF01740 STAS domain BA_0882 PF07517 SecA DEAD-like domain BA_0882 PF01043 SecA preprotein cross-linking domain BA_0882 PF07516 SecA Wing and Scaffold domain BA_0883 PF14667 Polysaccharide biosynthesis C-terminal domain BA_0883 PF01943 Polysaccharide biosynthesis protein BA_0885 PF13205 Bacterial Ig-like domain BA_0885 PF00395 S-layer homology domain BA_0885 PF02368 Bacterial Ig-like domain (group 2) BA_0887 PF00395 S-layer homology domain BA_0889 PF03062 MBOAT, membrane-bound O-acyltransferase family BA_0890 PF03062 MBOAT, membrane-bound O-acyltransferase family BA_0894 PF00378 Enoyl-CoA hydratase/isomerase BA_0897 PF05343 M42 glutamyl aminopeptidase BA_0898 PF01520 N-acetylmuramoyl-L-alanine amidase BA_0898 PF00395 S-layer homology domain BA_0900 PF11121 Protein of unknown function (DUF2639) BA_0901 PF05544 Proline racemase BA_0902 PF02423 Ornithine cyclodeaminase/mu-crystallin family BA_0908 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_0909 PF00528 Binding-protein-dependent transport system inner membrane component BA_0910 PF00528 Binding-protein-dependent transport system inner membrane component BA_0910 PF12911 N-terminal TM domain of oligopeptide transport permease C BA_0912 PF00005 ABC transporter BA_0912 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA_0921 PF00083 Sugar (and other) transporter BA_0923 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_0923 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BA_0924 PF12431 Transcriptional regulator BA_0924 PF08279 HTH domain BA_0924 PF00072 Response regulator receiver domain BA_0925 PF03401 Tripartite tricarboxylate transporter family receptor BA_0926 PF02342 TerD domain BA_0931 PF06445 GyrI-like small molecule binding domain BA_0931 PF13411 MerR HTH family regulatory protein BA_0934 PF00772 DnaB-like helicase N terminal domain BA_0934 PF03796 DnaB-like helicase C terminal domain BA_0939 PF01925 Sulfite exporter TauE/SafE BA_0944 PF07690 Major Facilitator Superfamily BA_0954 PF07993 Male sterility protein BA_0954 PF00550 Phosphopantetheine attachment site BA_0955 PF00440 Bacterial regulatory proteins, tetR family BA_0955 PF18665 Tetracyclin repressor-like, C-terminal domain BA_0959 PF01066 CDP-alcohol phosphatidyltransferase BA_0963 PF02733 Dak1 domain BA_0965 PF02733 Dak1 domain BA_0966 PF02525 Flavodoxin-like fold BA_0967 PF02082 Transcriptional regulator BA_0975 PF00672 HAMP domain BA_0975 PF01966 HD domain BA_0981 PF00395 S-layer homology domain BA_0986 PF11181 Heat induced stress protein YflT BA_0987 PF05532 CsbD-like BA_0990 PF01740 STAS domain BA_0991 PF13581 Histidine kinase-like ATPase domain BA_0992 PF04542 Sigma-70 region 2 BA_0992 PF04539 Sigma-70 region 3 BA_0992 PF04545 Sigma-70, region 4 BA_0994 PF13426 PAS domain BA_0994 PF07228 Stage II sporulation protein E (SpoIIE) BA_0995 PF03705 CheR methyltransferase, all-alpha domain BA_0995 PF01739 CheR methyltransferase, SAM binding domain BA_0996 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA_0996 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_0996 PF00072 Response regulator receiver domain BA_0996 PF01627 Hpt domain BA_0996 PF00512 His Kinase A (phospho-acceptor) domain BA_1001 PF01906 Putative heavy-metal-binding BA_1004 PF08240 Alcohol dehydrogenase GroES-like domain BA_1004 PF00107 Zinc-binding dehydrogenase BA_1005 PF11121 Protein of unknown function (DUF2639) BA_1008 PF00149 Calcineurin-like phosphoesterase BA_1009 PF13514 AAA domain BA_1010 PF12323 Helix-turn-helix domain BA_1010 PF01385 Probable transposase BA_1010 PF07282 Putative transposase DNA-binding domain BA_1012 PF01336 OB-fold nucleic acid binding domain BA_1012 PF01966 HD domain BA_1013 PF00440 Bacterial regulatory proteins, tetR family BA_1014 PF07690 Major Facilitator Superfamily BA_1015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_1016 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_1017 PF18801 response regulator aspartate phosphatase H, N terminal BA_1019 PF08386 TAP-like protein BA_1019 PF00561 alpha/beta hydrolase fold BA_1024 PF04309 Glycerol-3-phosphate responsive antiterminator BA_1025 PF00230 Major intrinsic protein BA_1026 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BA_1026 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BA_1027 PF01266 FAD dependent oxidoreductase BA_1027 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BA_1032 PF04542 Sigma-70 region 2 BA_1032 PF08281 Sigma-70, region 4 BA_1037 PF07690 Major Facilitator Superfamily BA_1038 PF07690 Major Facilitator Superfamily BA_1040 PF13538 UvrD-like helicase C-terminal domain BA_1045 PF01047 MarR family BA_1046 PF12732 YtxH-like protein BA_1047 PF01230 HIT domain BA_1048 PF00005 ABC transporter BA_1049 PF05975 Bacterial ABC transporter protein EcsB BA_1050 PF12787 EcsC protein family BA_1052 PF00440 Bacterial regulatory proteins, tetR family BA_1052 PF17934 Tetracyclin repressor-like, C-terminal domain BA_1054 PF03703 Bacterial PH domain BA_1065 PF03703 Bacterial PH domain BA_1066 PF03703 Bacterial PH domain BA_1068 PF03992 Antibiotic biosynthesis monooxygenase BA_1069 PF00905 Penicillin binding protein transpeptidase domain BA_1069 PF00912 Transglycosylase BA_1070 PF01208 Uroporphyrinogen decarboxylase (URO-D) BA_1071 PF00762 Ferrochelatase BA_1072 PF01593 Flavin containing amine oxidoreductase BA_1078 PF03965 Penicillinase repressor BA_1080 PF00440 Bacterial regulatory proteins, tetR family BA_1080 PF17932 Tetracyclin repressor-like, C-terminal domain BA_1086 PF00356 Bacterial regulatory proteins, lacI family BA_1087 PF14149 YhfH-like protein BA_1088 PF12706 Beta-lactamase superfamily domain BA_1089 PF03099 Biotin/lipoate A/B protein ligase family BA_1089 PF10437 Bacterial lipoate protein ligase C-terminus BA_1091 PF00501 AMP-binding enzyme BA_1091 PF13193 AMP-binding enzyme C-terminal domain BA_1093 PF01520 N-acetylmuramoyl-L-alanine amidase BA_1093 PF00395 S-layer homology domain BA_1094 PF05593 RHS Repeat BA_1098 PF05593 RHS Repeat BA_1109 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BA_1111 PF01966 HD domain BA_1113 PF04542 Sigma-70 region 2 BA_1113 PF08281 Sigma-70, region 4 BA_1114 PF12833 Helix-turn-helix domain BA_1114 PF06445 GyrI-like small molecule binding domain BA_1118 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1118 PF00512 His Kinase A (phospho-acceptor) domain BA_1119 PF00072 Response regulator receiver domain BA_1119 PF00486 Transcriptional regulatory protein, C terminal BA_1124 PF16491 CAAX prenyl protease N-terminal, five membrane helices BA_1124 PF01435 Peptidase family M48 BA_1125 PF02743 Cache domain BA_1125 PF00672 HAMP domain BA_1125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_1126 PF00892 EamA-like transporter family BA_1127 PF00150 Cellulase (glycosyl hydrolase family 5) BA_1127 PF00395 S-layer homology domain BA_1127 PF03424 Carbohydrate binding domain (family 17/28) BA_1130 PF00395 S-layer homology domain BA_1131 PF01274 Malate synthase BA_1132 PF00463 Isocitrate lyase family BA_1135 PF00313 'Cold-shock' DNA-binding domain BA_1138 PF06338 ComK protein BA_1139 PF09335 SNARE associated Golgi protein BA_1140 PF10502 Signal peptidase, peptidase S26 BA_1141 PF12705 PD-(D/E)XK nuclease superfamily BA_1141 PF13361 UvrD-like helicase C-terminal domain BA_1142 PF00580 UvrD/REP helicase N-terminal domain BA_1142 PF13361 UvrD-like helicase C-terminal domain BA_1142 PF12705 PD-(D/E)XK nuclease superfamily BA_1144 PF10676 Spore germination protein gerPA/gerPF BA_1145 PF10970 Spore germination protein GerPE BA_1147 PF10737 Spore germination protein GerPC BA_1148 PF10803 Spore germination GerPB BA_1149 PF10676 Spore germination protein gerPA/gerPF BA_1152 PF01557 Fumarylacetoacetate (FAA) hydrolase family BA_1154 PF00202 Aminotransferase class-III BA_1155 PF07457 Protein of unknown function (DUF1516) BA_1157 PF00733 Asparagine synthase BA_1157 PF13537 Glutamine amidotransferase domain BA_1158 PF00762 Ferrochelatase BA_1159 PF06628 Catalase-related immune-responsive BA_1159 PF00199 Catalase BA_1162 PF00128 Alpha amylase, catalytic domain BA_1166 PF04461 Protein of unknown function (DUF520) BA_1167 PF13509 S1 domain BA_1167 PF17783 CvfB-like winged helix domain BA_1169 PF00639 PPIC-type PPIASE domain BA_1171 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA_1171 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_1172 PF12758 Protein of unknown function (DUF3813) BA_1175 PF14168 YjzC-like protein BA_1177 PF17871 AAA lid domain BA_1177 PF02861 Clp amino terminal domain, pathogenicity island component BA_1177 PF10431 C-terminal, D2-small domain, of ClpB protein BA_1177 PF07724 AAA domain (Cdc48 subfamily) BA_1177 PF00004 ATPase family associated with various cellular activities (AAA) BA_1182 PF10815 ComZ BA_1184 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BA_1184 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BA_1185 PF00109 Beta-ketoacyl synthase, N-terminal domain BA_1185 PF02801 Beta-ketoacyl synthase, C-terminal domain BA_1186 PF10026 Predicted Zn-dependent protease (DUF2268) BA_1187 PF12227 Protein of unknown function (DUF3603) BA_1188 PF00579 tRNA synthetases class I (W and Y) BA_1191 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_1192 PF00528 Binding-protein-dependent transport system inner membrane component BA_1193 PF12911 N-terminal TM domain of oligopeptide transport permease C BA_1193 PF00528 Binding-protein-dependent transport system inner membrane component BA_1194 PF00005 ABC transporter BA_1194 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA_1195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA_1195 PF00005 ABC transporter BA_1196 PF01554 MatE BA_1197 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_1200 PF03960 ArsC family BA_1201 PF03741 Integral membrane protein TerC family BA_1203 PF05389 Negative regulator of genetic competence (MecA) BA_1204 PF13091 PLD-like domain BA_1204 PF13396 Phospholipase_D-nuclease N-terminal BA_1206 PF01432 Peptidase family M3 BA_1206 PF08439 Oligopeptidase F BA_1209 PF01152 Bacterial-like globin BA_1210 PF01928 CYTH domain BA_1212 PF04607 Region found in RelA / SpoT proteins BA_1213 PF01513 ATP-NAD kinase BA_1214 PF00849 RNA pseudouridylate synthase BA_1217 PF00149 Calcineurin-like phosphoesterase BA_1219 PF00535 Glycosyl transferase family 2 BA_1220 PF08241 Methyltransferase domain BA_1221 PF05711 Macrocin-O-methyltransferase (TylF) BA_1224 PF00535 Glycosyl transferase family 2 BA_1224 PF13181 Tetratricopeptide repeat BA_1228 PF00483 Nucleotidyl transferase BA_1229 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BA_1230 PF16363 GDP-mannose 4,6 dehydratase BA_1231 PF04321 RmlD substrate binding domain BA_1235 PF07098 Protein of unknown function (DUF1360) BA_1239 PF13361 UvrD-like helicase C-terminal domain BA_1239 PF00580 UvrD/REP helicase N-terminal domain BA_1240 PF13673 Acetyltransferase (GNAT) domain BA_1242 PF00756 Putative esterase BA_1245 PF02368 Bacterial Ig-like domain (group 2) BA_1246 PF00474 Sodium:solute symporter family BA_1248 PF00425 chorismate binding enzyme BA_1248 PF04715 Anthranilate synthase component I, N terminal region BA_1249 PF02885 Glycosyl transferase family, helical bundle domain BA_1249 PF00591 Glycosyl transferase family, a/b domain BA_1249 PF00117 Glutamine amidotransferase class-I BA_1250 PF02885 Glycosyl transferase family, helical bundle domain BA_1250 PF00591 Glycosyl transferase family, a/b domain BA_1251 PF00218 Indole-3-glycerol phosphate synthase BA_1252 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BA_1253 PF00291 Pyridoxal-phosphate dependent enzyme BA_1254 PF00290 Tryptophan synthase alpha chain BA_1256 PF02652 L-lactate permease BA_1257 PF10042 Uncharacterized conserved protein (DUF2278) BA_1263 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA_1263 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_1269 PF00364 Biotin-requiring enzyme BA_1269 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA_1269 PF02817 e3 binding domain BA_1270 PF02779 Transketolase, pyrimidine binding domain BA_1270 PF16870 2-oxoglutarate dehydrogenase C-terminal BA_1270 PF00676 Dehydrogenase E1 component BA_1271 PF01381 Helix-turn-helix BA_1282 PF13649 Methyltransferase domain BA_1286 PF00768 D-alanyl-D-alanine carboxypeptidase BA_1286 PF07943 Penicillin-binding protein 5, C-terminal domain BA_1288 PF12389 Camelysin metallo-endopeptidase BA_1290 PF12389 Camelysin metallo-endopeptidase BA_1292 PF01381 Helix-turn-helix BA_1292 PF08671 Anti-repressor SinI BA_1295 PF05547 Immune inhibitor A peptidase M6 BA_1296 PF00171 Aldehyde dehydrogenase family BA_1297 PF00005 ABC transporter BA_1297 PF08402 TOBE domain BA_1298 PF00528 Binding-protein-dependent transport system inner membrane component BA_1299 PF00528 Binding-protein-dependent transport system inner membrane component BA_1300 PF13416 Bacterial extracellular solute-binding protein BA_1302 PF03176 MMPL family BA_1304 PF00849 RNA pseudouridylate synthase BA_1304 PF01479 S4 domain BA_1306 PF00188 Cysteine-rich secretory protein family BA_1308 PF02754 Cysteine-rich domain BA_1308 PF13183 4Fe-4S dicluster domain BA_1309 PF01565 FAD binding domain BA_1309 PF02913 FAD linked oxidases, C-terminal domain BA_1310 PF13556 PucR C-terminal helix-turn-helix domain BA_1310 PF05651 Putative sugar diacid recognition BA_1310 PF17853 GGDEF-like domain BA_1312 PF00072 Response regulator receiver domain BA_1312 PF00486 Transcriptional regulatory protein, C terminal BA_1313 PF00989 PAS fold BA_1313 PF00672 HAMP domain BA_1313 PF18698 Histidine kinase sensor domain BA_1313 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1313 PF00512 His Kinase A (phospho-acceptor) domain BA_1314 PF00392 Bacterial regulatory proteins, gntR family BA_1314 PF07729 FCD domain BA_1315 PF02754 Cysteine-rich domain BA_1316 PF11870 Domain of unknown function (DUF3390) BA_1316 PF13183 4Fe-4S dicluster domain BA_1316 PF02589 LUD domain BA_1317 PF02589 LUD domain BA_1318 PF01478 Type IV leader peptidase family BA_1318 PF06750 Bacterial Peptidase A24 N-terminal domain BA_1321 PF01226 Formate/nitrite transporter BA_1322 PF03741 Integral membrane protein TerC family BA_1323 PF02386 Cation transport protein BA_1324 PF00269 Small, acid-soluble spore proteins, alpha/beta type BA_1326 PF01575 MaoC like domain BA_1331 PF00561 alpha/beta hydrolase fold BA_1332 PF01266 FAD dependent oxidoreductase BA_1333 PF02386 Cation transport protein BA_1339 PF00528 Binding-protein-dependent transport system inner membrane component BA_1340 PF13419 Haloacid dehalogenase-like hydrolase BA_1341 PF00266 Aminotransferase class-V BA_1343 PF08220 DeoR-like helix-turn-helix domain BA_1343 PF00455 DeoR C terminal sensor domain BA_1346 PF00395 S-layer homology domain BA_1346 PF01520 N-acetylmuramoyl-L-alanine amidase BA_1349 PF04748 Divergent polysaccharide deacetylase BA_1350 PF09388 Spo0E like sporulation regulatory protein BA_1351 PF02743 Cache domain BA_1351 PF00512 His Kinase A (phospho-acceptor) domain BA_1351 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1352 PF01047 MarR family BA_1354 PF12867 DinB superfamily BA_1356 PF13188 PAS domain BA_1356 PF13426 PAS domain BA_1356 PF00989 PAS fold BA_1356 PF00512 His Kinase A (phospho-acceptor) domain BA_1356 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1359 PF06508 Queuosine biosynthesis protein QueC BA_1360 PF01242 6-pyruvoyl tetrahydropterin synthase BA_1361 PF04055 Radical SAM superfamily BA_1362 PF14489 QueF-like protein BA_1363 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BA_1369 PF07972 NrdI Flavodoxin like BA_1372 PF00268 Ribonucleotide reductase, small chain BA_1373 PF00392 Bacterial regulatory proteins, gntR family BA_1374 PF00005 ABC transporter BA_1376 PF00005 ABC transporter BA_1380 PF01037 Lrp/AsnC ligand binding domain BA_1382 PF00857 Isochorismatase family BA_1384 PF02016 LD-carboxypeptidase N-terminal domain BA_1384 PF17676 LD-carboxypeptidase C-terminal domain BA_1385 PF03060 Nitronate monooxygenase BA_1386 PF04914 DltD protein BA_1387 PF00550 Phosphopantetheine attachment site BA_1388 PF03062 MBOAT, membrane-bound O-acyltransferase family BA_1389 PF00501 AMP-binding enzyme BA_1389 PF13193 AMP-binding enzyme C-terminal domain BA_1392 PF07687 Peptidase dimerisation domain BA_1392 PF01546 Peptidase family M20/M25/M40 BA_1394 PF00258 Flavodoxin BA_1397 PF01636 Phosphotransferase enzyme family BA_1402 PF01554 MatE BA_1403 PF02673 Bacitracin resistance protein BacA BA_1406 PF01047 MarR family BA_1408 PF00375 Sodium:dicarboxylate symporter family BA_1409 PF02386 Cation transport protein BA_1411 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BA_1413 PF03698 Uncharacterised protein family (UPF0180) BA_1416 PF01063 Amino-transferase class IV BA_1417 PF00205 Thiamine pyrophosphate enzyme, central domain BA_1417 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA_1417 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA_1418 PF01842 ACT domain BA_1418 PF10369 Small subunit of acetolactate synthase BA_1419 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BA_1419 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BA_1420 PF00682 HMGL-like BA_1420 PF08502 LeuA allosteric (dimerisation) domain BA_1421 PF00180 Isocitrate/isopropylmalate dehydrogenase BA_1422 PF00330 Aconitase family (aconitate hydratase) BA_1423 PF00694 Aconitase C-terminal domain BA_1424 PF13393 Histidyl-tRNA synthetase BA_1425 PF01634 ATP phosphoribosyltransferase BA_1426 PF00815 Histidinol dehydrogenase BA_1427 PF00475 Imidazoleglycerol-phosphate dehydratase BA_1428 PF00117 Glutamine amidotransferase class-I BA_1429 PF00977 Histidine biosynthesis protein BA_1430 PF00977 Histidine biosynthesis protein BA_1431 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BA_1432 PF02811 PHP domain BA_1434 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA_1434 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA_1435 PF01066 CDP-alcohol phosphatidyltransferase BA_1436 PF00884 Sulfatase BA_1438 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BA_1438 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BA_1440 PF01507 Phosphoadenosine phosphosulfate reductase family BA_1441 PF14306 PUA-like domain BA_1441 PF01747 ATP-sulfurylase BA_1443 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BA_1443 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BA_1445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA_1446 PF01903 CbiX BA_1448 PF00209 Sodium:neurotransmitter symporter family BA_1450 PF00375 Sodium:dicarboxylate symporter family BA_1452 PF03553 Na+/H+ antiporter family BA_1455 PF09922 Cell wall-active antibiotics response 4TMS YvqF BA_1456 PF00672 HAMP domain BA_1456 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1456 PF07730 Histidine kinase BA_1457 PF00072 Response regulator receiver domain BA_1457 PF00196 Bacterial regulatory proteins, luxR family BA_1459 PF05525 Branched-chain amino acid transport protein BA_1462 PF08241 Methyltransferase domain BA_1467 PF00042 Globin BA_1467 PF00175 Oxidoreductase NAD-binding domain BA_1467 PF00970 Oxidoreductase FAD-binding domain BA_1470 PF01925 Sulfite exporter TauE/SafE BA_1471 PF01384 Phosphate transporter family BA_1472 PF01865 Protein of unknown function DUF47 BA_1474 PF00912 Transglycosylase BA_1474 PF00905 Penicillin binding protein transpeptidase domain BA_1479 PF01904 Protein of unknown function DUF72 BA_1481 PF00589 Phage integrase family BA_1482 PF16736 Single Cache-like BA_1482 PF00989 PAS fold BA_1482 PF00512 His Kinase A (phospho-acceptor) domain BA_1482 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1483 PF01048 Phosphorylase superfamily BA_1486 PF03706 Lysylphosphatidylglycerol synthase TM region BA_1486 PF09924 Uncharacterised conserved protein (DUF2156) BA_1489 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BA_1489 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BA_1490 PF00768 D-alanyl-D-alanine carboxypeptidase BA_1490 PF07943 Penicillin-binding protein 5, C-terminal domain BA_1491 PF07670 Nucleoside recognition BA_1492 PF07670 Nucleoside recognition BA_1493 PF00849 RNA pseudouridylate synthase BA_1493 PF01479 S4 domain BA_1494 PF00578 AhpC/TSA family BA_1495 PF05140 ResB-like family BA_1496 PF01578 Cytochrome C assembly protein BA_1497 PF00486 Transcriptional regulatory protein, C terminal BA_1497 PF00072 Response regulator receiver domain BA_1498 PF18698 Histidine kinase sensor domain BA_1498 PF00989 PAS fold BA_1498 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1498 PF00512 His Kinase A (phospho-acceptor) domain BA_1498 PF00672 HAMP domain BA_1499 PF01923 Cobalamin adenosyltransferase BA_1502 PF12822 ECF transporter, substrate-specific component BA_1504 PF14493 Helix-turn-helix domain BA_1505 PF00271 Helicase conserved C-terminal domain BA_1505 PF00270 DEAD/DEAH box helicase BA_1506 PF02517 CPBP intramembrane metalloprotease BA_1509 PF13411 MerR HTH family regulatory protein BA_1509 PF02607 B12 binding domain BA_1509 PF02310 B12 binding domain BA_1510 PF05389 Negative regulator of genetic competence (MecA) BA_1511 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BA_1511 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BA_1516 PF00710 Asparaginase, N-terminal BA_1516 PF17763 Glutaminase/Asparaginase C-terminal domain BA_1518 PF02224 Cytidylate kinase BA_1519 PF00575 S1 RNA binding domain BA_1520 PF01070 FMN-dependent dehydrogenase BA_1521 PF14140 YpzI-like protein BA_1523 PF14045 YIEGIA protein BA_1525 PF01926 50S ribosome-binding GTPase BA_1525 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BA_1526 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BA_1526 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BA_1528 PF10966 Protein of unknown function (DUF2768) BA_1530 PF09547 Stage IV sporulation protein A (spore_IV_A) BA_1531 PF00216 Bacterial DNA-binding protein BA_1532 PF01227 GTP cyclohydrolase I BA_1533 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BA_1534 PF01209 ubiE/COQ5 methyltransferase family BA_1535 PF00348 Polyprenyl synthetase BA_1536 PF00334 Nucleoside diphosphate kinase BA_1537 PF01264 Chorismate synthase BA_1538 PF01761 3-dehydroquinate synthase BA_1539 PF00155 Aminotransferase class I and II BA_1542 PF08858 IDEAL domain BA_1542 PF08864 UPF0302 domain BA_1543 PF10673 Protein of unknown function (DUF2487) BA_1544 PF00355 Rieske [2Fe-2S] domain BA_1545 PF00033 Cytochrome b/b6/petB BA_1546 PF00032 Cytochrome b(C-terminal)/b6/petD BA_1546 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA_1548 PF07187 Protein of unknown function (DUF1405) BA_1550 PF09577 Sporulation protein YpjB (SpoYpjB) BA_1551 PF04298 Putative neutral zinc metallopeptidase BA_1553 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA_1553 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_1554 PF03819 MazG nucleotide pyrophosphohydrolase domain BA_1555 PF01113 Dihydrodipicolinate reductase, N-terminus BA_1555 PF05173 Dihydrodipicolinate reductase, C-terminus BA_1556 PF02142 MGS-like domain BA_1557 PF02585 GlcNAc-PI de-N-acetylase BA_1558 PF13439 Glycosyltransferase Family 4 BA_1558 PF00534 Glycosyl transferases group 1 BA_1559 PF13735 tRNA nucleotidyltransferase domain 2 putative BA_1559 PF12627 Probable RNA and SrmB- binding site of polymerase A BA_1559 PF01743 Poly A polymerase head domain BA_1560 PF02237 Biotin protein ligase C terminal domain BA_1560 PF03099 Biotin/lipoate A/B protein ligase family BA_1560 PF08279 HTH domain BA_1562 PF02548 Ketopantoate hydroxymethyltransferase BA_1563 PF02569 Pantoate-beta-alanine ligase BA_1564 PF02261 Aspartate decarboxylase BA_1565 PF00929 Exonuclease BA_1565 PF13307 Helicase C-terminal domain BA_1565 PF04851 Type III restriction enzyme, res subunit BA_1566 PF14084 Protein of unknown function (DUF4264) BA_1568 PF00155 Aminotransferase class I and II BA_1569 PF07261 Replication initiation and membrane attachment BA_1570 PF10576 Iron-sulfur binding domain of endonuclease III BA_1570 PF00730 HhH-GPD superfamily base excision DNA repair protein BA_1570 PF00633 Helix-hairpin-helix motif BA_1572 PF00905 Penicillin binding protein transpeptidase domain BA_1572 PF00912 Transglycosylase BA_1573 PF03838 Recombination protein U BA_1574 PF10720 Protein of unknown function (DUF2515) BA_1582 PF06908 YspA SLOG family BA_1583 PF05103 DivIVA protein BA_1584 PF01170 Putative RNA methylase family UPF0020 BA_1584 PF02926 THUMP domain BA_1586 PF13307 Helicase C-terminal domain BA_1587 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BA_1589 PF01636 Phosphotransferase enzyme family BA_1590 PF00557 Metallopeptidase family M24 BA_1591 PF00156 Phosphoribosyl transferase domain BA_1592 PF00860 Permease family BA_1593 PF04235 Protein of unknown function (DUF418) BA_1595 PF00350 Dynamin family BA_1597 PF00583 Acetyltransferase (GNAT) family BA_1598 PF10752 Protein of unknown function (DUF2533) BA_1599 PF00581 Rhodanese-like domain BA_1602 PF03738 Glutathionylspermidine synthase preATP-grasp BA_1605 PF00689 Cation transporting ATPase, C-terminus BA_1605 PF00690 Cation transporter/ATPase, N-terminus BA_1606 PF01367 5'-3' exonuclease, C-terminal SAM fold BA_1606 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BA_1612 PF02397 Bacterial sugar transferase BA_1615 PF00535 Glycosyl transferase family 2 BA_1619 PF13673 Acetyltransferase (GNAT) domain BA_1619 PF18014 Acetyltransferase (GNAT) domain BA_1623 PF13456 Reverse transcriptase-like BA_1624 PF01263 Aldose 1-epimerase BA_1629 PF00313 'Cold-shock' DNA-binding domain BA_1631 PF01810 LysE type translocator BA_1634 PF04341 Protein of unknown function, DUF485 BA_1635 PF00474 Sodium:solute symporter family BA_1636 PF00202 Aminotransferase class-III BA_1639 PF00999 Sodium/hydrogen exchanger family BA_1640 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BA_1640 PF00753 Metallo-beta-lactamase superfamily BA_1640 PF17770 Ribonuclease J C-terminal domain BA_1641 PF06445 GyrI-like small molecule binding domain BA_1641 PF13411 MerR HTH family regulatory protein BA_1643 PF04239 Protein of unknown function (DUF421) BA_1645 PF02698 DUF218 domain BA_1647 PF00881 Nitroreductase family BA_1656 PF17209 Hfq protein BA_1658 PF01618 MotA/TolQ/ExbB proton channel family BA_1659 PF00691 OmpA family BA_1659 PF13677 Membrane MotB of proton-channel complex MotA/MotB BA_1660 PF00072 Response regulator receiver domain BA_1662 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BA_1662 PF04509 CheC-like family BA_1665 PF03705 CheR methyltransferase, all-alpha domain BA_1665 PF01739 CheR methyltransferase, SAM binding domain BA_1669 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA_1669 PF00460 Flagella basal body rod protein BA_1674 PF00460 Flagella basal body rod protein BA_1675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA_1675 PF00460 Flagella basal body rod protein BA_1676 PF02049 Flagellar hook-basal body complex protein FliE BA_1679 PF14842 FliG N-terminal domain BA_1679 PF14841 FliG middle domain BA_1679 PF01706 FliG C-terminal domain BA_1681 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA_1681 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA_1681 PF18269 T3SS EscN ATPase C-terminal domain BA_1686 PF07559 Flagellar basal body protein FlaE BA_1686 PF00460 Flagella basal body rod protein BA_1686 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA_1692 PF12181 DNA binding domain of the motility gene repressor (MogR) BA_1693 PF00535 Glycosyl transferase family 2 BA_1706 PF00669 Bacterial flagellin N-terminal helical region BA_1706 PF00700 Bacterial flagellin C-terminal helical region BA_1707 PF01464 Transglycosylase SLT domain BA_1710 PF04509 CheC-like family BA_1710 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BA_1712 PF00813 FliP family BA_1713 PF01313 Bacterial export proteins, family 3 BA_1715 PF01312 FlhB HrpN YscU SpaS Family BA_1716 PF00771 FHIPEP family BA_1719 PF00460 Flagella basal body rod protein BA_1719 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA_1720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA_1720 PF01411 tRNA synthetases class II (A) BA_1720 PF02272 DHHA1 domain BA_1725 PF00440 Bacterial regulatory proteins, tetR family BA_1725 PF17932 Tetracyclin repressor-like, C-terminal domain BA_1726 PF17329 Family of unknown function (DUF5367) BA_1728 PF03992 Antibiotic biosynthesis monooxygenase BA_1729 PF08141 Small acid-soluble spore protein H family BA_1733 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_1733 PF03466 LysR substrate binding domain BA_1734 PF08402 TOBE domain BA_1734 PF00005 ABC transporter BA_1736 PF00528 Binding-protein-dependent transport system inner membrane component BA_1737 PF12706 Beta-lactamase superfamily domain BA_1737 PF00753 Metallo-beta-lactamase superfamily BA_1743 PF07943 Penicillin-binding protein 5, C-terminal domain BA_1743 PF00768 D-alanyl-D-alanine carboxypeptidase BA_1745 PF00300 Histidine phosphatase superfamily (branch 1) BA_1751 PF13537 Glutamine amidotransferase domain BA_1751 PF00733 Asparagine synthase BA_1756 PF16916 Dimerisation domain of Zinc Transporter BA_1756 PF01545 Cation efflux family BA_1758 PF00392 Bacterial regulatory proteins, gntR family BA_1758 PF07729 FCD domain BA_1759 PF00892 EamA-like transporter family BA_1760 PF07683 Cobalamin synthesis protein cobW C-terminal domain BA_1760 PF02492 CobW/HypB/UreG, nucleotide-binding domain BA_1762 PF03773 Predicted permease BA_1764 PF00535 Glycosyl transferase family 2 BA_1766 PF03553 Na+/H+ antiporter family BA_1767 PF10415 Fumarase C C-terminus BA_1767 PF00206 Lyase BA_1774 PF03575 Peptidase family S51 BA_1778 PF02683 Cytochrome C biogenesis protein transmembrane region BA_1779 PF00578 AhpC/TSA family BA_1784 PF00291 Pyridoxal-phosphate dependent enzyme BA_1785 PF04286 Protein of unknown function (DUF445) BA_1791 PF00072 Response regulator receiver domain BA_1791 PF00196 Bacterial regulatory proteins, luxR family BA_1792 PF07730 Histidine kinase BA_1792 PF13492 GAF domain BA_1792 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1792 PF13185 GAF domain BA_1793 PF00005 ABC transporter BA_1796 PF13091 PLD-like domain BA_1797 PF00696 Amino acid kinase family BA_1799 PF00375 Sodium:dicarboxylate symporter family BA_1800 PF10415 Fumarase C C-terminus BA_1800 PF00206 Lyase BA_1801 PF03949 Malic enzyme, NAD binding domain BA_1801 PF00390 Malic enzyme, N-terminal domain BA_1802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1803 PF08664 YcbB domain BA_1803 PF00072 Response regulator receiver domain BA_1804 PF00176 SNF2 family N-terminal domain BA_1804 PF00271 Helicase conserved C-terminal domain BA_1804 PF04434 SWIM zinc finger BA_1808 PF03590 Aspartate-ammonia ligase BA_1811 PF00696 Amino acid kinase family BA_1811 PF13840 ACT domain BA_1814 PF13761 Domain of unknown function (DUF4166) BA_1815 PF14158 YndJ-like protein BA_1816 PF00293 NUDIX domain BA_1817 PF02368 Bacterial Ig-like domain (group 2) BA_1817 PF13205 Bacterial Ig-like domain BA_1817 PF00395 S-layer homology domain BA_1819 PF07690 Major Facilitator Superfamily BA_1822 PF02554 Carbon starvation protein CstA BA_1823 PF03976 Polyphosphate kinase 2 (PPK2) BA_1826 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BA_1826 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BA_1828 PF16360 GTP-binding GTPase Middle Region BA_1828 PF13167 GTP-binding GTPase N-terminal BA_1828 PF01926 50S ribosome-binding GTPase BA_1830 PF07690 Major Facilitator Superfamily BA_1831 PF00291 Pyridoxal-phosphate dependent enzyme BA_1834 PF14667 Polysaccharide biosynthesis C-terminal domain BA_1834 PF01943 Polysaccharide biosynthesis protein BA_1835 PF00209 Sodium:neurotransmitter symporter family BA_1836 PF03422 Carbohydrate binding module (family 6) BA_1836 PF00457 Glycosyl hydrolases family 11 BA_1836 PF01522 Polysaccharide deacetylase BA_1838 PF04239 Protein of unknown function (DUF421) BA_1842 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA_1842 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BA_1846 PF01625 Peptide methionine sulfoxide reductase BA_1849 PF01063 Amino-transferase class IV BA_1850 PF00205 Thiamine pyrophosphate enzyme, central domain BA_1850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA_1850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA_1851 PF10369 Small subunit of acetolactate synthase BA_1852 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BA_1852 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BA_1853 PF00920 Dehydratase family BA_1854 PF00291 Pyridoxal-phosphate dependent enzyme BA_1854 PF00585 C-terminal regulatory domain of Threonine dehydratase BA_1855 PF09587 Bacterial capsule synthesis protein PGA_cap BA_1858 PF07690 Major Facilitator Superfamily BA_1859 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BA_1861 PF00072 Response regulator receiver domain BA_1861 PF04397 LytTr DNA-binding domain BA_1862 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BA_1862 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BA_1865 PF01979 Amidohydrolase family BA_1866 PF13026 Protein of unknown function (DUF3887) BA_1866 PF12146 Serine aminopeptidase, S33 BA_1867 PF00005 ABC transporter BA_1875 PF04055 Radical SAM superfamily BA_1875 PF13186 Iron-sulfur cluster-binding domain BA_1876 PF13302 Acetyltransferase (GNAT) domain BA_1877 PF00486 Transcriptional regulatory protein, C terminal BA_1877 PF00072 Response regulator receiver domain BA_1880 PF01566 Natural resistance-associated macrophage protein BA_1881 PF17773 UPF0176 acylphosphatase like domain BA_1881 PF12368 Rhodanase C-terminal BA_1881 PF00581 Rhodanese-like domain BA_1884 PF08546 Ketopantoate reductase PanE/ApbA C terminal BA_1884 PF02558 Ketopantoate reductase PanE/ApbA BA_1888 PF05791 Bacillus haemolytic enterotoxin (HBL) BA_1891 PF04198 Putative sugar-binding domain BA_1892 PF01791 DeoC/LacD family aldolase BA_1893 PF07662 Na+ dependent nucleoside transporter C-terminus BA_1893 PF01773 Na+ dependent nucleoside transporter N-terminus BA_1894 PF00591 Glycosyl transferase family, a/b domain BA_1894 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BA_1894 PF02885 Glycosyl transferase family, helical bundle domain BA_1895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA_1896 PF07301 Protein of unknown function (DUF1453) BA_1897 PF05979 Bacterial protein of unknown function (DUF896) BA_1901 PF05195 Aminopeptidase P, N-terminal domain BA_1901 PF00557 Metallopeptidase family M24 BA_1902 PF07732 Multicopper oxidase BA_1902 PF07731 Multicopper oxidase BA_1903 PF01551 Peptidase family M23 BA_1905 PF01396 Topoisomerase DNA binding C4 zinc finger BA_1905 PF13342 C-terminal repeat of topoisomerase BA_1905 PF01751 Toprim domain BA_1905 PF01131 DNA topoisomerase BA_1908 PF02525 Flavodoxin-like fold BA_1912 PF04234 CopC domain BA_1912 PF05425 Copper resistance protein D BA_1912 PF13115 YtkA-like BA_1913 PF07987 Domain of unkown function (DUF1775) BA_1915 PF00892 EamA-like transporter family BA_1916 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_1916 PF03466 LysR substrate binding domain BA_1917 PF02082 Transcriptional regulator BA_1918 PF01323 DSBA-like thioredoxin domain BA_1919 PF00881 Nitroreductase family BA_1921 PF01425 Amidase BA_1922 PF01594 AI-2E family transporter BA_1923 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BA_1923 PF00056 lactate/malate dehydrogenase, NAD binding domain BA_1924 PF01593 Flavin containing amine oxidoreductase BA_1925 PF02492 CobW/HypB/UreG, nucleotide-binding domain BA_1925 PF07683 Cobalamin synthesis protein cobW C-terminal domain BA_1928 PF13193 AMP-binding enzyme C-terminal domain BA_1928 PF00501 AMP-binding enzyme BA_1929 PF01575 MaoC like domain BA_1930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BA_1930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BA_1933 PF00005 ABC transporter BA_1933 PF12399 Branched-chain amino acid ATP-binding cassette transporter BA_1934 PF00005 ABC transporter BA_1935 PF02653 Branched-chain amino acid transport system / permease component BA_1937 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_1937 PF03466 LysR substrate binding domain BA_1941 PF01047 MarR family BA_1943 PF01654 Cytochrome bd terminal oxidase subunit I BA_1944 PF02322 Cytochrome bd terminal oxidase subunit II BA_1945 PF00005 ABC transporter BA_1945 PF00664 ABC transporter transmembrane region BA_1946 PF00664 ABC transporter transmembrane region BA_1946 PF00005 ABC transporter BA_1949 PF17676 LD-carboxypeptidase C-terminal domain BA_1949 PF02016 LD-carboxypeptidase N-terminal domain BA_1950 PF07943 Penicillin-binding protein 5, C-terminal domain BA_1950 PF00768 D-alanyl-D-alanine carboxypeptidase BA_1952 PF01476 LysM domain BA_1952 PF00877 NlpC/P60 family BA_1955 PF00072 Response regulator receiver domain BA_1955 PF00486 Transcriptional regulatory protein, C terminal BA_1956 PF00512 His Kinase A (phospho-acceptor) domain BA_1956 PF00989 PAS fold BA_1956 PF16736 Single Cache-like BA_1956 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1958 PF00106 short chain dehydrogenase BA_1960 PF04439 Streptomycin adenylyltransferase BA_1961 PF01522 Polysaccharide deacetylase BA_1968 PF03447 Homoserine dehydrogenase, NAD binding domain BA_1968 PF00742 Homoserine dehydrogenase BA_1968 PF01842 ACT domain BA_1969 PF00291 Pyridoxal-phosphate dependent enzyme BA_1970 PF00288 GHMP kinases N terminal domain BA_1970 PF08544 GHMP kinases C terminal BA_1973 PF03816 Cell envelope-related transcriptional attenuator domain BA_1975 PF00486 Transcriptional regulatory protein, C terminal BA_1975 PF00072 Response regulator receiver domain BA_1976 PF16736 Single Cache-like BA_1976 PF00989 PAS fold BA_1976 PF00512 His Kinase A (phospho-acceptor) domain BA_1976 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_1977 PF01522 Polysaccharide deacetylase BA_1979 PF02308 MgtC family BA_1980 PF00583 Acetyltransferase (GNAT) family BA_1981 PF04183 IucA / IucC family BA_1981 PF06276 Ferric iron reductase FhuF-like transporter BA_1982 PF06276 Ferric iron reductase FhuF-like transporter BA_1982 PF04183 IucA / IucC family BA_1983 PF13193 AMP-binding enzyme C-terminal domain BA_1983 PF00501 AMP-binding enzyme BA_1986 PF01261 Xylose isomerase-like TIM barrel BA_1987 PF00269 Small, acid-soluble spore proteins, alpha/beta type BA_1989 PF01810 LysE type translocator BA_1992 PF01734 Patatin-like phospholipase BA_1997 PF13344 Haloacid dehalogenase-like hydrolase BA_1997 PF00293 NUDIX domain BA_1998 PF02540 NAD synthase BA_2000 PF18277 AbrB C-terminal domain BA_2000 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BA_2001 PF00082 Subtilase family BA_2002 PF01022 Bacterial regulatory protein, arsR family BA_2003 PF00248 Aldo/keto reductase family BA_2004 PF07690 Major Facilitator Superfamily BA_2008 PF03193 RsgA GTPase BA_2009 PF00672 HAMP domain BA_2009 PF02743 Cache domain BA_2009 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_2013 PF00210 Ferritin-like domain BA_2016 PF00296 Luciferase-like monooxygenase BA_2018 PF01593 Flavin containing amine oxidoreductase BA_2020 PF00248 Aldo/keto reductase family BA_2021 PF07683 Cobalamin synthesis protein cobW C-terminal domain BA_2021 PF02492 CobW/HypB/UreG, nucleotide-binding domain BA_2022 PF00583 Acetyltransferase (GNAT) family BA_2035 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BA_2035 PF01297 Zinc-uptake complex component A periplasmic BA_2037 PF13460 NAD(P)H-binding BA_2038 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA_2039 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BA_2039 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BA_2041 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_2042 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_2044 PF00300 Histidine phosphatase superfamily (branch 1) BA_2046 PF08757 CotH kinase protein BA_2047 PF00293 NUDIX domain BA_2048 PF09335 SNARE associated Golgi protein BA_2049 PF01943 Polysaccharide biosynthesis protein BA_2049 PF14667 Polysaccharide biosynthesis C-terminal domain BA_2051 PF03773 Predicted permease BA_2052 PF09323 Domain of unknown function (DUF1980) BA_2053 PF03061 Thioesterase superfamily BA_2054 PF13091 PLD-like domain BA_2054 PF13396 Phospholipase_D-nuclease N-terminal BA_2057 PF13460 NAD(P)H-binding BA_2058 PF04306 Protein of unknown function (DUF456) BA_2059 PF00571 CBS domain BA_2059 PF03471 Transporter associated domain BA_2059 PF01595 Cyclin M transmembrane N-terminal domain BA_2063 PF05525 Branched-chain amino acid transport protein BA_2064 PF01588 Putative tRNA binding domain BA_2068 PF07454 Stage II sporulation protein P (SpoIIP) BA_2070 PF02557 D-alanyl-D-alanine carboxypeptidase BA_2072 PF01425 Amidase BA_2073 PF07690 Major Facilitator Superfamily BA_2075 PF01145 SPFH domain / Band 7 family BA_2076 PF00300 Histidine phosphatase superfamily (branch 1) BA_2079 PF00842 Alanine racemase, C-terminal domain BA_2079 PF01168 Alanine racemase, N-terminal domain BA_2080 PF13847 Methyltransferase domain BA_2083 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BA_2084 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_2084 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA_2085 PF00392 Bacterial regulatory proteins, gntR family BA_2085 PF00155 Aminotransferase class I and II BA_2091 PF00583 Acetyltransferase (GNAT) family BA_2101 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BA_2106 PF01209 ubiE/COQ5 methyltransferase family BA_2107 PF01268 Formate--tetrahydrofolate ligase BA_2109 PF00271 Helicase conserved C-terminal domain BA_2109 PF00270 DEAD/DEAH box helicase BA_2110 PF01261 Xylose isomerase-like TIM barrel BA_2111 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_2113 PF00107 Zinc-binding dehydrogenase BA_2113 PF08240 Alcohol dehydrogenase GroES-like domain BA_2114 PF08281 Sigma-70, region 4 BA_2114 PF04542 Sigma-70 region 2 BA_2119 PF00255 Glutathione peroxidase BA_2120 PF13559 Domain of unknown function (DUF4129) BA_2120 PF01841 Transglutaminase-like superfamily BA_2120 PF11992 Domain of unknown function (DUF3488) BA_2121 PF01882 Protein of unknown function DUF58 BA_2122 PF07726 ATPase family associated with various cellular activities (AAA) BA_2122 PF17863 AAA lid domain BA_2125 PF14710 Respiratory nitrate reductase alpha N-terminal BA_2125 PF01568 Molydopterin dinucleotide binding domain BA_2125 PF00384 Molybdopterin oxidoreductase BA_2126 PF13247 4Fe-4S dicluster domain BA_2126 PF14711 Respiratory nitrate reductase beta C-terminal BA_2127 PF02613 Nitrate reductase delta subunit BA_2128 PF02665 Nitrate reductase gamma subunit BA_2129 PF00155 Aminotransferase class I and II BA_2129 PF00392 Bacterial regulatory proteins, gntR family BA_2130 PF00005 ABC transporter BA_2132 PF00325 Bacterial regulatory proteins, crp family BA_2132 PF00027 Cyclic nucleotide-binding domain BA_2133 PF04055 Radical SAM superfamily BA_2133 PF06463 Molybdenum Cofactor Synthesis C BA_2134 PF00899 ThiF family BA_2135 PF03453 MoeA N-terminal region (domain I and II) BA_2135 PF03454 MoeA C-terminal region (domain IV) BA_2135 PF00994 Probable molybdopterin binding domain BA_2136 PF02391 MoaE protein BA_2138 PF07690 Major Facilitator Superfamily BA_2143 PF01903 CbiX BA_2144 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA_2145 PF00355 Rieske [2Fe-2S] domain BA_2146 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_2146 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BA_2146 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BA_2146 PF18267 Rubredoxin NAD+ reductase C-terminal domain BA_2146 PF04324 BFD-like [2Fe-2S] binding domain BA_2147 PF04405 Domain of Unknown function (DUF542) BA_2147 PF01814 Hemerythrin HHE cation binding domain BA_2154 PF04232 Stage V sporulation protein S (SpoVS) BA_2159 PF01510 N-acetylmuramoyl-L-alanine amidase BA_2163 PF01966 HD domain BA_2164 PF00005 ABC transporter BA_2164 PF12848 ABC transporter BA_2164 PF16326 ABC transporter C-terminal domain BA_2168 PF00436 Single-strand binding protein family BA_2169 PF00440 Bacterial regulatory proteins, tetR family BA_2171 PF13769 Virulence factor BA_2171 PF08712 Scaffold protein Nfu/NifU N terminal BA_2173 PF06491 Disulphide isomerase BA_2174 PF04445 Putative SAM-dependent methyltransferase BA_2175 PF00750 tRNA synthetases class I (R) BA_2175 PF05746 DALR anticodon binding domain BA_2175 PF03485 Arginyl tRNA synthetase N terminal domain BA_2181 PF08264 Anticodon-binding domain of tRNA BA_2181 PF00133 tRNA synthetases class I (I, L, M and V) BA_2185 PF08245 Mur ligase middle domain BA_2185 PF01225 Mur ligase family, catalytic domain BA_2185 PF02875 Mur ligase family, glutamate ligase domain BA_2186 PF00152 tRNA synthetases class II (D, K and N) BA_2186 PF01336 OB-fold nucleic acid binding domain BA_2190 PF01580 FtsK/SpoIIIE family BA_2190 PF12538 DNA transporter BA_2210 PF02595 Glycerate kinase family BA_2211 PF00939 Sodium:sulfate symporter transmembrane region BA_2212 PF00486 Transcriptional regulatory protein, C terminal BA_2212 PF00072 Response regulator receiver domain BA_2213 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_2213 PF00672 HAMP domain BA_2213 PF00512 His Kinase A (phospho-acceptor) domain BA_2216 PF00209 Sodium:neurotransmitter symporter family BA_2219 PF10997 Alternate to MurJ BA_2220 PF13419 Haloacid dehalogenase-like hydrolase BA_2222 PF00465 Iron-containing alcohol dehydrogenase BA_2223 PF01177 Asp/Glu/Hydantoin racemase BA_2224 PF01980 tRNA-methyltransferase O BA_2225 PF00583 Acetyltransferase (GNAT) family BA_2228 PF00005 ABC transporter BA_2229 PF05975 Bacterial ABC transporter protein EcsB BA_2230 PF14005 YpjP-like protein BA_2231 PF13419 Haloacid dehalogenase-like hydrolase BA_2235 PF07930 D-aminopeptidase, domain B BA_2235 PF00144 Beta-lactamase BA_2236 PF00303 Thymidylate synthase BA_2237 PF00186 Dihydrofolate reductase BA_2238 PF03717 Penicillin-binding Protein dimerisation domain BA_2238 PF05223 NTF2-like N-terminal transpeptidase domain BA_2238 PF00905 Penicillin binding protein transpeptidase domain BA_2239 PF02525 Flavodoxin-like fold BA_2240 PF01553 Acyltransferase BA_2241 PF03006 Haemolysin-III related BA_2242 PF02416 mttA/Hcf106 family BA_2243 PF00902 Sec-independent protein translocase protein (TatC) BA_2246 PF02645 Uncharacterised protein, DegV family COG1307 BA_2249 PF02630 SCO1/SenC BA_2250 PF00011 Hsp20/alpha crystallin family BA_2251 PF13537 Glutamine amidotransferase domain BA_2251 PF00733 Asparagine synthase BA_2255 PF01497 Periplasmic binding protein BA_2256 PF01063 Amino-transferase class IV BA_2257 PF00881 Nitroreductase family BA_2261 PF00293 NUDIX domain BA_2262 PF00011 Hsp20/alpha crystallin family BA_2263 PF00924 Mechanosensitive ion channel BA_2264 PF07730 Histidine kinase BA_2264 PF13185 GAF domain BA_2265 PF00196 Bacterial regulatory proteins, luxR family BA_2265 PF00072 Response regulator receiver domain BA_2267 PF00107 Zinc-binding dehydrogenase BA_2267 PF08240 Alcohol dehydrogenase GroES-like domain BA_2276 PF03358 NADPH-dependent FMN reductase BA_2279 PF00571 CBS domain BA_2279 PF00005 ABC transporter BA_2280 PF00528 Binding-protein-dependent transport system inner membrane component BA_2281 PF13520 Amino acid permease BA_2288 PF00571 CBS domain BA_2288 PF03471 Transporter associated domain BA_2288 PF01595 Cyclin M transmembrane N-terminal domain BA_2289 PF00171 Aldehyde dehydrogenase family BA_2290 PF07997 Protein of unknown function (DUF1694) BA_2291 PF09385 Histidine kinase N terminal BA_2294 PF00202 Aminotransferase class-III BA_2295 PF01144 Coenzyme A transferase BA_2296 PF01144 Coenzyme A transferase BA_2297 PF01546 Peptidase family M20/M25/M40 BA_2297 PF07687 Peptidase dimerisation domain BA_2298 PF00583 Acetyltransferase (GNAT) family BA_2299 PF00158 Sigma-54 interaction domain BA_2299 PF13426 PAS domain BA_2299 PF02954 Bacterial regulatory protein, Fis family BA_2300 PF12544 Lysine-2,3-aminomutase BA_2301 PF14122 YokU-like protein, putative antitoxin BA_2302 PF06855 YozE SAM-like fold BA_2305 PF14162 YozD-like protein BA_2308 PF07070 SpoOM protein BA_2309 PF01569 PAP2 superfamily BA_2310 PF16916 Dimerisation domain of Zinc Transporter BA_2310 PF01545 Cation efflux family BA_2311 PF00085 Thioredoxin BA_2314 PF14436 Bacterial EndoU nuclease BA_2314 PF04740 LXG domain of WXG superfamily BA_2315 PF00395 S-layer homology domain BA_2315 PF03424 Carbohydrate binding domain (family 17/28) BA_2315 PF00150 Cellulase (glycosyl hydrolase family 5) BA_2317 PF04471 Restriction endonuclease BA_2341 PF10676 Spore germination protein gerPA/gerPF BA_2345 PF00905 Penicillin binding protein transpeptidase domain BA_2345 PF00912 Transglycosylase BA_2346 PF07690 Major Facilitator Superfamily BA_2347 PF01521 Iron-sulphur cluster biosynthesis BA_2348 PF00285 Citrate synthase, C-terminal domain BA_2349 PF03972 MmgE/PrpD family BA_2352 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA_2352 PF02770 Acyl-CoA dehydrogenase, middle domain BA_2352 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA_2353 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA_2353 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BA_2354 PF00171 Aldehyde dehydrogenase family BA_2355 PF01810 LysE type translocator BA_2356 PF00378 Enoyl-CoA hydratase/isomerase BA_2358 PF10763 Protein of unknown function (DUF2584) BA_2359 PF12320 Type 5 capsule protein repressor C-terminal domain BA_2359 PF00149 Calcineurin-like phosphoesterase BA_2360 PF13476 AAA domain BA_2363 PF01022 Bacterial regulatory protein, arsR family BA_2367 PF07690 Major Facilitator Superfamily BA_2368 PF00106 short chain dehydrogenase BA_2369 PF00425 chorismate binding enzyme BA_2370 PF13193 AMP-binding enzyme C-terminal domain BA_2370 PF00501 AMP-binding enzyme BA_2371 PF00550 Phosphopantetheine attachment site BA_2371 PF00857 Isochorismatase family BA_2372 PF13193 AMP-binding enzyme C-terminal domain BA_2372 PF00668 Condensation domain BA_2372 PF00501 AMP-binding enzyme BA_2372 PF00975 Thioesterase domain BA_2372 PF00550 Phosphopantetheine attachment site BA_2373 PF03621 MbtH-like protein BA_2374 PF07690 Major Facilitator Superfamily BA_2377 PF00216 Bacterial DNA-binding protein BA_2379 PF05163 DinB family BA_2380 PF00082 Subtilase family BA_2381 PF01235 Sodium:alanine symporter family BA_2385 PF16291 Domain of unknown function (DUF4937 BA_2386 PF01479 S4 domain BA_2386 PF00849 RNA pseudouridylate synthase BA_2388 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA_2388 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA_2388 PF03129 Anticodon binding domain BA_2388 PF02824 TGS domain BA_2392 PF12146 Serine aminopeptidase, S33 BA_2393 PF07690 Major Facilitator Superfamily BA_2396 PF13649 Methyltransferase domain BA_2405 PF16123 Hydroxyacylglutathione hydrolase C-terminus BA_2405 PF00753 Metallo-beta-lactamase superfamily BA_2407 PF03176 MMPL family BA_2409 PF00302 Chloramphenicol acetyltransferase BA_2412 PF00583 Acetyltransferase (GNAT) family BA_2418 PF01593 Flavin containing amine oxidoreductase BA_2420 PF13302 Acetyltransferase (GNAT) domain BA_2422 PF00313 'Cold-shock' DNA-binding domain BA_2435 PF03466 LysR substrate binding domain BA_2435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_2436 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA_2436 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA_2439 PF03466 LysR substrate binding domain BA_2439 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_2440 PF03475 3-alpha domain BA_2440 PF03473 MOSC domain BA_2443 PF00005 ABC transporter BA_2443 PF00664 ABC transporter transmembrane region BA_2444 PF00664 ABC transporter transmembrane region BA_2444 PF00005 ABC transporter BA_2447 PF01810 LysE type translocator BA_2448 PF01381 Helix-turn-helix BA_2448 PF07883 Cupin domain BA_2453 PF00890 FAD binding domain BA_2454 PF12680 SnoaL-like domain BA_2454 PF08281 Sigma-70, region 4 BA_2454 PF04542 Sigma-70 region 2 BA_2460 PF02638 Glycosyl hydrolase-like 10 BA_2463 PF02378 Phosphotransferase system, EIIC BA_2465 PF03702 Anhydro-N-acetylmuramic acid kinase BA_2466 PF01869 BadF/BadG/BcrA/BcrD ATPase family BA_2467 PF02660 Glycerol-3-phosphate acyltransferase BA_2468 PF00266 Aminotransferase class-V BA_2469 PF00291 Pyridoxal-phosphate dependent enzyme BA_2472 PF00753 Metallo-beta-lactamase superfamily BA_2472 PF16123 Hydroxyacylglutathione hydrolase C-terminus BA_2475 PF00270 DEAD/DEAH box helicase BA_2475 PF00271 Helicase conserved C-terminal domain BA_2479 PF00440 Bacterial regulatory proteins, tetR family BA_2479 PF17932 Tetracyclin repressor-like, C-terminal domain BA_2482 PF12704 MacB-like periplasmic core domain BA_2482 PF00005 ABC transporter BA_2482 PF02687 FtsX-like permease family BA_2483 PF09313 Domain of unknown function (DUF1971) BA_2483 PF03848 Tellurite resistance protein TehB BA_2485 PF08241 Methyltransferase domain BA_2486 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA_2486 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA_2486 PF00205 Thiamine pyrophosphate enzyme, central domain BA_2487 PF12802 MarR family BA_2488 PF00300 Histidine phosphatase superfamily (branch 1) BA_2490 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BA_2498 PF07687 Peptidase dimerisation domain BA_2498 PF01546 Peptidase family M20/M25/M40 BA_2502 PF04542 Sigma-70 region 2 BA_2502 PF08281 Sigma-70, region 4 BA_2504 PF03717 Penicillin-binding Protein dimerisation domain BA_2504 PF00905 Penicillin binding protein transpeptidase domain BA_2508 PF01569 PAP2 superfamily BA_2509 PF00356 Bacterial regulatory proteins, lacI family BA_2510 PF07690 Major Facilitator Superfamily BA_2511 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA_2511 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA_2512 PF00294 pfkB family carbohydrate kinase BA_2513 PF00171 Aldehyde dehydrogenase family BA_2514 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA_2514 PF00205 Thiamine pyrophosphate enzyme, central domain BA_2514 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA_2516 PF01116 Fructose-bisphosphate aldolase class-II BA_2517 PF04962 KduI/IolB family BA_2522 PF18801 response regulator aspartate phosphatase H, N terminal BA_2523 PF01381 Helix-turn-helix BA_2526 PF02557 D-alanyl-D-alanine carboxypeptidase BA_2528 PF00395 S-layer homology domain BA_2528 PF01520 N-acetylmuramoyl-L-alanine amidase BA_2530 PF00440 Bacterial regulatory proteins, tetR family BA_2531 PF00005 ABC transporter BA_2531 PF16326 ABC transporter C-terminal domain BA_2533 PF00563 EAL domain BA_2533 PF00990 Diguanylate cyclase, GGDEF domain BA_2533 PF03707 Bacterial signalling protein N terminal repeat BA_2534 PF13302 Acetyltransferase (GNAT) domain BA_2537 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_2538 PF00581 Rhodanese-like domain BA_2541 PF00005 ABC transporter BA_2543 PF00440 Bacterial regulatory proteins, tetR family BA_2543 PF08359 YsiA-like protein, C-terminal region BA_2547 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA_2547 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA_2547 PF02770 Acyl-CoA dehydrogenase, middle domain BA_2548 PF00289 Biotin carboxylase, N-terminal domain BA_2548 PF02785 Biotin carboxylase C-terminal domain BA_2548 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA_2549 PF00364 Biotin-requiring enzyme BA_2550 PF00682 HMGL-like BA_2551 PF00378 Enoyl-CoA hydratase/isomerase BA_2552 PF01039 Carboxyl transferase domain BA_2553 PF13193 AMP-binding enzyme C-terminal domain BA_2553 PF16177 Acetyl-coenzyme A synthetase N-terminus BA_2553 PF00501 AMP-binding enzyme BA_2555 PF00583 Acetyltransferase (GNAT) family BA_2556 PF00485 Phosphoribulokinase / Uridine kinase family BA_2558 PF05163 DinB family BA_2559 PF07943 Penicillin-binding protein 5, C-terminal domain BA_2559 PF00768 D-alanyl-D-alanine carboxypeptidase BA_2560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_2560 PF00512 His Kinase A (phospho-acceptor) domain BA_2561 PF00072 Response regulator receiver domain BA_2561 PF00486 Transcriptional regulatory protein, C terminal BA_2562 PF01966 HD domain BA_2563 PF13021 Domain of unknown function (DUF3885) BA_2564 PF01048 Phosphorylase superfamily BA_2572 PF17755 UvrA DNA-binding domain BA_2572 PF17760 UvrA interaction domain BA_2572 PF17760 UvrA interaction domain BA_2572 PF17755 UvrA DNA-binding domain BA_2575 PF00144 Beta-lactamase BA_2576 PF09278 MerR, DNA binding BA_2576 PF00376 MerR family regulatory protein BA_2577 PF07690 Major Facilitator Superfamily BA_2581 PF01636 Phosphotransferase enzyme family BA_2582 PF12833 Helix-turn-helix domain BA_2585 PF00155 Aminotransferase class I and II BA_2585 PF00392 Bacterial regulatory proteins, gntR family BA_2588 PF00107 Zinc-binding dehydrogenase BA_2588 PF08240 Alcohol dehydrogenase GroES-like domain BA_2594 PF07486 Cell Wall Hydrolase BA_2597 PF00486 Transcriptional regulatory protein, C terminal BA_2597 PF00072 Response regulator receiver domain BA_2603 PF00005 ABC transporter BA_2608 PF01842 ACT domain BA_2608 PF03447 Homoserine dehydrogenase, NAD binding domain BA_2608 PF00742 Homoserine dehydrogenase BA_2609 PF00392 Bacterial regulatory proteins, gntR family BA_2609 PF00155 Aminotransferase class I and II BA_2610 PF07478 D-ala D-ala ligase C-terminus BA_2610 PF01820 D-ala D-ala ligase N-terminus BA_2611 PF03070 TENA/THI-4/PQQC family BA_2627 PF00067 Cytochrome P450 BA_2629 PF00132 Bacterial transferase hexapeptide (six repeats) BA_2630 PF07561 Domain of Unknown Function (DUF1540) BA_2632 PF00067 Cytochrome P450 BA_2636 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_2636 PF00512 His Kinase A (phospho-acceptor) domain BA_2636 PF00989 PAS fold BA_2636 PF13188 PAS domain BA_2636 PF13426 PAS domain BA_2637 PF03717 Penicillin-binding Protein dimerisation domain BA_2637 PF00905 Penicillin binding protein transpeptidase domain BA_2638 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BA_2639 PF01177 Asp/Glu/Hydantoin racemase BA_2640 PF07155 ECF-type riboflavin transporter, S component BA_2641 PF12558 ATP-binding cassette cobalt transporter BA_2641 PF00005 ABC transporter BA_2643 PF09680 Family of unknown function BA_2644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_2644 PF00512 His Kinase A (phospho-acceptor) domain BA_2646 PF04229 GrpB protein BA_2647 PF00107 Zinc-binding dehydrogenase BA_2647 PF08240 Alcohol dehydrogenase GroES-like domain BA_2648 PF03717 Penicillin-binding Protein dimerisation domain BA_2648 PF00905 Penicillin binding protein transpeptidase domain BA_2648 PF03793 PASTA domain BA_2650 PF00144 Beta-lactamase BA_2650 PF11954 Domain of unknown function (DUF3471) BA_2657 PF01965 DJ-1/PfpI family BA_2661 PF00144 Beta-lactamase BA_2664 PF07690 Major Facilitator Superfamily BA_2668 PF03009 Glycerophosphoryl diester phosphodiesterase family BA_2672 PF00892 EamA-like transporter family BA_2673 PF01270 Glycosyl hydrolases family 8 BA_2676 PF00293 NUDIX domain BA_2678 PF00144 Beta-lactamase BA_2680 PF07690 Major Facilitator Superfamily BA_2683 PF09297 NADH pyrophosphatase zinc ribbon domain BA_2683 PF00293 NUDIX domain BA_2684 PF02768 DNA polymerase III beta subunit, C-terminal domain BA_2684 PF00712 DNA polymerase III beta subunit, N-terminal domain BA_2684 PF02767 DNA polymerase III beta subunit, central domain BA_2685 PF00293 NUDIX domain BA_2688 PF12706 Beta-lactamase superfamily domain BA_2692 PF09234 Domain of unknown function (DUF1963) BA_2698 PF08000 Bacterial PH domain BA_2700 PF12867 DinB superfamily BA_2705 PF01541 GIY-YIG catalytic domain BA_2715 PF01266 FAD dependent oxidoreductase BA_2720 PF13419 Haloacid dehalogenase-like hydrolase BA_2724 PF00282 Pyridoxal-dependent decarboxylase conserved domain BA_2728 PF03714 Bacterial pullanase-associated domain BA_2728 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BA_2728 PF00128 Alpha amylase, catalytic domain BA_2730 PF07504 Fungalysin/Thermolysin Propeptide Motif BA_2730 PF02868 Thermolysin metallopeptidase, alpha-helical domain BA_2730 PF03413 Peptidase propeptide and YPEB domain BA_2730 PF01447 Thermolysin metallopeptidase, catalytic domain BA_2734 PF00344 SecY translocase BA_2735 PF11638 DnaA N-terminal domain BA_2735 PF00308 Bacterial dnaA protein BA_2735 PF08299 Bacterial dnaA protein helix-turn-helix BA_2736 PF00892 EamA-like transporter family BA_2737 PF00392 Bacterial regulatory proteins, gntR family BA_2737 PF00155 Aminotransferase class I and II BA_2738 PF00561 alpha/beta hydrolase fold BA_2743 PF06081 Aromatic acid exporter family member 1 BA_2746 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BA_2747 PF03413 Peptidase propeptide and YPEB domain BA_2747 PF14620 YpeB sporulation BA_2748 PF07486 Cell Wall Hydrolase BA_2748 PF01471 Putative peptidoglycan binding domain BA_2751 PF03301 Tryptophan 2,3-dioxygenase BA_2752 PF04199 Putative cyclase BA_2753 PF00266 Aminotransferase class-V BA_2754 PF08359 YsiA-like protein, C-terminal region BA_2754 PF00440 Bacterial regulatory proteins, tetR family BA_2755 PF00293 NUDIX domain BA_2755 PF13344 Haloacid dehalogenase-like hydrolase BA_2761 PF01590 GAF domain BA_2761 PF00158 Sigma-54 interaction domain BA_2761 PF02954 Bacterial regulatory protein, Fis family BA_2764 PF13302 Acetyltransferase (GNAT) domain BA_2765 PF00455 DeoR C terminal sensor domain BA_2765 PF08220 DeoR-like helix-turn-helix domain BA_2768 PF00403 Heavy-metal-associated domain BA_2768 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA_2768 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_2769 PF02082 Transcriptional regulator BA_2773 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA_2773 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_2774 PF02817 e3 binding domain BA_2774 PF00364 Biotin-requiring enzyme BA_2774 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA_2775 PF02779 Transketolase, pyrimidine binding domain BA_2775 PF02780 Transketolase, C-terminal domain BA_2776 PF00676 Dehydrogenase E1 component BA_2778 PF00106 short chain dehydrogenase BA_2779 PF13673 Acetyltransferase (GNAT) domain BA_2779 PF04229 GrpB protein BA_2785 PF00528 Binding-protein-dependent transport system inner membrane component BA_2786 PF00005 ABC transporter BA_2786 PF00571 CBS domain BA_2787 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BA_2788 PF00574 Clp protease BA_2791 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BA_2792 PF13673 Acetyltransferase (GNAT) domain BA_2793 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BA_2793 PF18416 N-acetylglucosamine binding protein domain 2 BA_2797 PF10990 Protein of unknown function (DUF2809) BA_2803 PF13567 Domain of unknown function (DUF4131) BA_2803 PF03772 Competence protein BA_2803 PF00753 Metallo-beta-lactamase superfamily BA_2814 PF13538 UvrD-like helicase C-terminal domain BA_2817 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BA_2818 PF00271 Helicase conserved C-terminal domain BA_2818 PF00270 DEAD/DEAH box helicase BA_2818 PF00570 HRDC domain BA_2818 PF09382 RQC domain BA_2818 PF16124 RecQ zinc-binding BA_2826 PF01368 DHH family BA_2826 PF02833 DHHA2 domain BA_2827 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BA_2827 PF18416 N-acetylglucosamine binding protein domain 2 BA_2829 PF02627 Carboxymuconolactone decarboxylase family BA_2830 PF01235 Sodium:alanine symporter family BA_2831 PF00171 Aldehyde dehydrogenase family BA_2832 PF00701 Dihydrodipicolinate synthetase family BA_2833 PF05544 Proline racemase BA_2834 PF05544 Proline racemase BA_2835 PF01266 FAD dependent oxidoreductase BA_2836 PF13188 PAS domain BA_2836 PF00158 Sigma-54 interaction domain BA_2836 PF02954 Bacterial regulatory protein, Fis family BA_2841 PF08876 Domain of unknown function (DUF1836) BA_2842 PF09335 SNARE associated Golgi protein BA_2846 PF04914 DltD protein BA_2847 PF13302 Acetyltransferase (GNAT) domain BA_2847 PF00958 GMP synthase C terminal domain BA_2847 PF13673 Acetyltransferase (GNAT) domain BA_2847 PF03352 Methyladenine glycosylase BA_2847 PF00117 Glutamine amidotransferase class-I BA_2848 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_2849 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BA_2849 PF00877 NlpC/P60 family BA_2850 PF13378 Enolase C-terminal domain-like BA_2850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BA_2855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA_2860 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BA_2860 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BA_2861 PF00512 His Kinase A (phospho-acceptor) domain BA_2861 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_2861 PF16736 Single Cache-like BA_2861 PF00989 PAS fold BA_2866 PF01048 Phosphorylase superfamily BA_2868 PF03808 Glycosyl transferase WecB/TagA/CpsF family BA_2869 PF08439 Oligopeptidase F BA_2869 PF01432 Peptidase family M3 BA_2872 PF02645 Uncharacterised protein, DegV family COG1307 BA_2877 PF07690 Major Facilitator Superfamily BA_2879 PF04519 Polymer-forming cytoskeletal BA_2880 PF13171 Protein of unknown function (DUF4004) BA_2881 PF12793 Sugar transport-related sRNA regulator N-term BA_2881 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_2882 PF07690 Major Facilitator Superfamily BA_2887 PF04226 Transglycosylase associated protein BA_2888 PF01156 Inosine-uridine preferring nucleoside hydrolase BA_2890 PF08241 Methyltransferase domain BA_2899 PF00155 Aminotransferase class I and II BA_2900 PF07977 FabA-like domain BA_2901 PF03630 Fumble BA_2906 PF00005 ABC transporter BA_2916 PF01594 AI-2E family transporter BA_2919 PF00296 Luciferase-like monooxygenase BA_2920 PF00528 Binding-protein-dependent transport system inner membrane component BA_2921 PF09084 NMT1/THI5 like BA_2922 PF00005 ABC transporter BA_2926 PF09297 NADH pyrophosphatase zinc ribbon domain BA_2926 PF00293 NUDIX domain BA_2930 PF02522 Aminoglycoside 3-N-acetyltransferase BA_2936 PF13536 Putative multidrug resistance efflux transporter BA_2937 PF12867 DinB superfamily BA_2941 PF08713 DNA alkylation repair enzyme BA_2944 PF01522 Polysaccharide deacetylase BA_2946 PF03741 Integral membrane protein TerC family BA_2947 PF00884 Sulfatase BA_2948 PF12848 ABC transporter BA_2948 PF00005 ABC transporter BA_2951 PF00440 Bacterial regulatory proteins, tetR family BA_2951 PF16295 Tetracyclin repressor-like, C-terminal domain BA_2953 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA_2954 PF01842 ACT domain BA_2954 PF02153 Prephenate dehydrogenase BA_2955 PF00155 Aminotransferase class I and II BA_2956 PF01264 Chorismate synthase BA_2958 PF01817 Chorismate mutase type II BA_2958 PF00793 DAHP synthetase I family BA_2964 PF01636 Phosphotransferase enzyme family BA_2967 PF01476 LysM domain BA_2967 PF06725 3D domain BA_2970 PF04542 Sigma-70 region 2 BA_2970 PF08281 Sigma-70, region 4 BA_2974 PF06039 Malate:quinone oxidoreductase (Mqo) BA_2975 PF13407 Periplasmic binding protein domain BA_2976 PF02653 Branched-chain amino acid transport system / permease component BA_2977 PF02653 Branched-chain amino acid transport system / permease component BA_2978 PF00005 ABC transporter BA_2979 PF04198 Putative sugar-binding domain BA_2979 PF00325 Bacterial regulatory proteins, crp family BA_2982 PF01791 DeoC/LacD family aldolase BA_2987 PF03992 Antibiotic biosynthesis monooxygenase BA_2991 PF01773 Na+ dependent nucleoside transporter N-terminus BA_2991 PF07662 Na+ dependent nucleoside transporter C-terminus BA_2992 PF00171 Aldehyde dehydrogenase family BA_2993 PF00696 Amino acid kinase family BA_2993 PF01472 PUA domain BA_2995 PF03807 NADP oxidoreductase coenzyme F420-dependent BA_2995 PF14748 Pyrroline-5-carboxylate reductase dimerisation BA_2996 PF01546 Peptidase family M20/M25/M40 BA_2997 PF01614 Bacterial transcriptional regulator BA_2997 PF09339 IclR helix-turn-helix domain BA_2998 PF00324 Amino acid permease BA_2999 PF01139 tRNA-splicing ligase RtcB BA_3000 PF00487 Fatty acid desaturase BA_3001 PF00245 Alkaline phosphatase BA_3002 PF11188 Protein of unknown function (DUF2975) BA_3003 PF13443 Cro/C1-type HTH DNA-binding domain BA_3006 PF10086 YhfC intramembrane metalloprotease BA_3008 PF00072 Response regulator receiver domain BA_3008 PF04397 LytTr DNA-binding domain BA_3010 PF13302 Acetyltransferase (GNAT) domain BA_3011 PF12681 Glyoxalase-like domain BA_3016 PF17863 AAA lid domain BA_3016 PF07726 ATPase family associated with various cellular activities (AAA) BA_3020 PF07690 Major Facilitator Superfamily BA_3022 PF00535 Glycosyl transferase family 2 BA_3024 PF00535 Glycosyl transferase family 2 BA_3026 PF00535 Glycosyl transferase family 2 BA_3029 PF00202 Aminotransferase class-III BA_3030 PF06628 Catalase-related immune-responsive BA_3030 PF00199 Catalase BA_3032 PF01979 Amidohydrolase family BA_3032 PF13382 Adenine deaminase C-terminal domain BA_3033 PF00144 Beta-lactamase BA_3038 PF07726 ATPase family associated with various cellular activities (AAA) BA_3038 PF17863 AAA lid domain BA_3040 PF00881 Nitroreductase family BA_3041 PF01047 MarR family BA_3042 PF03764 Elongation factor G, domain IV BA_3042 PF00009 Elongation factor Tu GTP binding domain BA_3042 PF14492 Elongation Factor G, domain II BA_3042 PF00679 Elongation factor G C-terminus BA_3044 PF00293 NUDIX domain BA_3048 PF00005 ABC transporter BA_3049 PF00392 Bacterial regulatory proteins, gntR family BA_3052 PF12704 MacB-like periplasmic core domain BA_3052 PF00005 ABC transporter BA_3052 PF02687 FtsX-like permease family BA_3057 PF12833 Helix-turn-helix domain BA_3058 PF00583 Acetyltransferase (GNAT) family BA_3061 PF00892 EamA-like transporter family BA_3062 PF00155 Aminotransferase class I and II BA_3062 PF00392 Bacterial regulatory proteins, gntR family BA_3063 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BA_3064 PF13031 Protein of unknown function (DUF3892) BA_3066 PF00512 His Kinase A (phospho-acceptor) domain BA_3066 PF00672 HAMP domain BA_3067 PF00072 Response regulator receiver domain BA_3067 PF00486 Transcriptional regulatory protein, C terminal BA_3068 PF00561 alpha/beta hydrolase fold BA_3074 PF01925 Sulfite exporter TauE/SafE BA_3075 PF13302 Acetyltransferase (GNAT) domain BA_3076 PF00324 Amino acid permease BA_3078 PF08713 DNA alkylation repair enzyme BA_3079 PF10898 Protein of unknown function (DUF2716) BA_3086 PF10502 Signal peptidase, peptidase S26 BA_3089 PF02146 Sir2 family BA_3090 PF01470 Pyroglutamyl peptidase BA_3095 PF03746 LamB/YcsF family BA_3096 PF02626 Carboxyltransferase domain, subdomain A and B BA_3097 PF02682 Carboxyltransferase domain, subdomain C and D BA_3098 PF09339 IclR helix-turn-helix domain BA_3098 PF01614 Bacterial transcriptional regulator BA_3099 PF10502 Signal peptidase, peptidase S26 BA_3100 PF03932 CutC family BA_3102 PF07454 Stage II sporulation protein P (SpoIIP) BA_3105 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BA_3105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA_3105 PF02770 Acyl-CoA dehydrogenase, middle domain BA_3110 PF07670 Nucleoside recognition BA_3113 PF02915 Rubrerythrin BA_3115 PF00440 Bacterial regulatory proteins, tetR family BA_3116 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BA_3116 PF00391 PEP-utilising enzyme, mobile domain BA_3118 PF00753 Metallo-beta-lactamase superfamily BA_3121 PF07875 Coat F domain BA_3123 PF08892 YqcI/YcgG family BA_3124 PF01810 LysE type translocator BA_3127 PF00269 Small, acid-soluble spore proteins, alpha/beta type BA_3128 PF10710 Protein of unknown function (DUF2512) BA_3129 PF11553 Protein of unknown function (DUF3231) BA_3130 PF00269 Small, acid-soluble spore proteins, alpha/beta type BA_3131 PF13823 Alcohol dehydrogenase GroES-associated BA_3131 PF08240 Alcohol dehydrogenase GroES-like domain BA_3131 PF00107 Zinc-binding dehydrogenase BA_3136 PF10415 Fumarase C C-terminus BA_3136 PF00206 Lyase BA_3137 PF17763 Glutaminase/Asparaginase C-terminal domain BA_3137 PF00710 Asparaginase, N-terminal BA_3138 PF01381 Helix-turn-helix BA_3140 PF01541 GIY-YIG catalytic domain BA_3140 PF12826 Helix-hairpin-helix motif BA_3140 PF08459 UvrC Helix-hairpin-helix N-terminal BA_3140 PF02151 UvrB/uvrC motif BA_3141 PF13520 Amino acid permease BA_3142 PF05525 Branched-chain amino acid transport protein BA_3143 PF14748 Pyrroline-5-carboxylate reductase dimerisation BA_3143 PF03807 NADP oxidoreductase coenzyme F420-dependent BA_3144 PF13564 DoxX-like family BA_3145 PF03949 Malic enzyme, NAD binding domain BA_3145 PF00390 Malic enzyme, N-terminal domain BA_3150 PF03323 Bacillus/Clostridium GerA spore germination protein BA_3153 PF08664 YcbB domain BA_3153 PF00072 Response regulator receiver domain BA_3155 PF04960 Glutaminase BA_3162 PF00149 Calcineurin-like phosphoesterase BA_3162 PF17936 Bacterial Ig domain BA_3162 PF02872 5'-nucleotidase, C-terminal domain BA_3164 PF06628 Catalase-related immune-responsive BA_3164 PF00199 Catalase BA_3165 PF00561 alpha/beta hydrolase fold BA_3166 PF00857 Isochorismatase family BA_3170 PF03466 LysR substrate binding domain BA_3170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_3172 PF01047 MarR family BA_3176 PF11181 Heat induced stress protein YflT BA_3179 PF03073 TspO/MBR family BA_3180 PF03441 FAD binding domain of DNA photolyase BA_3180 PF00875 DNA photolyase BA_3182 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BA_3183 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BA_3183 PF00361 Proton-conducting membrane transporter BA_3184 PF10057 Uncharacterized conserved protein (DUF2294) BA_3186 PF01040 UbiA prenyltransferase family BA_3187 PF00561 alpha/beta hydrolase fold BA_3189 PF01297 Zinc-uptake complex component A periplasmic BA_3190 PF00950 ABC 3 transport family BA_3191 PF00005 ABC transporter BA_3196 PF01451 Low molecular weight phosphotyrosine protein phosphatase BA_3197 PF01758 Sodium Bile acid symporter family BA_3198 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_3199 PF01022 Bacterial regulatory protein, arsR family BA_3202 PF00012 Hsp70 protein BA_3205 PF01037 Lrp/AsnC ligand binding domain BA_3208 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_3210 PF01609 Transposase DDE domain BA_3214 PF00144 Beta-lactamase BA_3216 PF01609 Transposase DDE domain BA_3220 PF12802 MarR family BA_3221 PF00175 Oxidoreductase NAD-binding domain BA_3221 PF00258 Flavodoxin BA_3221 PF00667 FAD binding domain BA_3221 PF00067 Cytochrome P450 BA_3223 PF07690 Major Facilitator Superfamily BA_3229 PF00072 Response regulator receiver domain BA_3229 PF00486 Transcriptional regulatory protein, C terminal BA_3230 PF00512 His Kinase A (phospho-acceptor) domain BA_3230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_3230 PF00672 HAMP domain BA_3236 PF00291 Pyridoxal-phosphate dependent enzyme BA_3243 PF01381 Helix-turn-helix BA_3247 PF00753 Metallo-beta-lactamase superfamily BA_3248 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BA_3251 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BA_3251 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BA_3252 PF04072 Leucine carboxyl methyltransferase BA_3255 PF00005 ABC transporter BA_3256 PF02687 FtsX-like permease family BA_3260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_3260 PF00672 HAMP domain BA_3260 PF00512 His Kinase A (phospho-acceptor) domain BA_3261 PF00486 Transcriptional regulatory protein, C terminal BA_3261 PF00072 Response regulator receiver domain BA_3263 PF01047 MarR family BA_3265 PF04299 Putative FMN-binding domain BA_3266 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_3266 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA_3267 PF07690 Major Facilitator Superfamily BA_3268 PF02589 LUD domain BA_3269 PF11870 Domain of unknown function (DUF3390) BA_3269 PF02589 LUD domain BA_3269 PF13183 4Fe-4S dicluster domain BA_3270 PF02754 Cysteine-rich domain BA_3271 PF03466 LysR substrate binding domain BA_3271 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_3275 PF17676 LD-carboxypeptidase C-terminal domain BA_3275 PF02016 LD-carboxypeptidase N-terminal domain BA_3279 PF07690 Major Facilitator Superfamily BA_3280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA_3280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA_3281 PF05116 Sucrose-6F-phosphate phosphohydrolase BA_3283 PF00356 Bacterial regulatory proteins, lacI family BA_3284 PF18801 response regulator aspartate phosphatase H, N terminal BA_3288 PF11798 IMS family HHH motif BA_3288 PF11799 impB/mucB/samB family C-terminal domain BA_3288 PF00817 impB/mucB/samB family BA_3291 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_3291 PF02743 Cache domain BA_3291 PF00672 HAMP domain BA_3296 PF01554 MatE BA_3299 PF08453 Peptidase family M9 N-terminal BA_3299 PF01752 Collagenase BA_3299 PF18496 Collagenase G catalytic helper subdomain BA_3300 PF01609 Transposase DDE domain BA_3302 PF07690 Major Facilitator Superfamily BA_3303 PF00440 Bacterial regulatory proteins, tetR family BA_3303 PF16859 Tetracyclin repressor-like, C-terminal domain BA_3305 PF01022 Bacterial regulatory protein, arsR family BA_3307 PF03313 Serine dehydratase alpha chain BA_3308 PF01842 ACT domain BA_3308 PF03315 Serine dehydratase beta chain BA_3312 PF00202 Aminotransferase class-III BA_3313 PF00708 Acylphosphatase BA_3313 PF01300 Telomere recombination BA_3313 PF07503 HypF finger BA_3313 PF17788 HypF Kae1-like domain BA_3314 PF00586 AIR synthase related protein, N-terminal domain BA_3314 PF02769 AIR synthase related protein, C-terminal domain BA_3315 PF00857 Isochorismatase family BA_3316 PF01037 Lrp/AsnC ligand binding domain BA_3317 PF13520 Amino acid permease BA_3320 PF01842 ACT domain BA_3320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA_3320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA_3321 PF00266 Aminotransferase class-V BA_3324 PF08281 Sigma-70, region 4 BA_3324 PF04542 Sigma-70 region 2 BA_3327 PF07883 Cupin domain BA_3328 PF12833 Helix-turn-helix domain BA_3328 PF01497 Periplasmic binding protein BA_3330 PF01804 Penicillin amidase BA_3332 PF00395 S-layer homology domain BA_3341 PF14044 NETI protein BA_3342 PF07690 Major Facilitator Superfamily BA_3343 PF12697 Alpha/beta hydrolase family BA_3344 PF01047 MarR family BA_3345 PF07690 Major Facilitator Superfamily BA_3348 PF12679 ABC-2 family transporter protein BA_3349 PF13732 Domain of unknown function (DUF4162) BA_3349 PF00005 ABC transporter BA_3350 PF13396 Phospholipase_D-nuclease N-terminal BA_3352 PF17314 Family of unknown function (DUF5360) BA_3353 PF00893 Small Multidrug Resistance protein BA_3354 PF00440 Bacterial regulatory proteins, tetR family BA_3355 PF01289 Thiol-activated cytolysin BA_3355 PF17440 Thiol-activated cytolysin beta sandwich domain BA_3356 PF02667 Short chain fatty acid transporter BA_3358 PF02525 Flavodoxin-like fold BA_3362 PF14256 YwiC-like protein BA_3364 PF00005 ABC transporter BA_3365 PF02361 Cobalt transport protein BA_3368 PF03737 Aldolase/RraA BA_3369 PF03606 C4-dicarboxylate anaerobic carrier BA_3370 PF04231 Endonuclease I BA_3373 PF01381 Helix-turn-helix BA_3374 PF02660 Glycerol-3-phosphate acyltransferase BA_3375 PF04073 Aminoacyl-tRNA editing domain BA_3376 PF03129 Anticodon binding domain BA_3376 PF13393 Histidyl-tRNA synthetase BA_3379 PF01638 HxlR-like helix-turn-helix BA_3380 PF00881 Nitroreductase family BA_3382 PF02887 Pyruvate kinase, alpha/beta domain BA_3382 PF00224 Pyruvate kinase, barrel domain BA_3382 PF00391 PEP-utilising enzyme, mobile domain BA_3387 PF00005 ABC transporter BA_3392 PF13419 Haloacid dehalogenase-like hydrolase BA_3394 PF13350 Tyrosine phosphatase family BA_3399 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_3400 PF00480 ROK family BA_3401 PF07690 Major Facilitator Superfamily BA_3402 PF14602 Hexapeptide repeat of succinyl-transferase BA_3402 PF12464 Maltose acetyltransferase BA_3406 PF00005 ABC transporter BA_3406 PF02687 FtsX-like permease family BA_3406 PF12704 MacB-like periplasmic core domain BA_3408 PF00579 tRNA synthetases class I (W and Y) BA_3409 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BA_3409 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BA_3409 PF13288 DXP reductoisomerase C-terminal domain BA_3410 PF01594 AI-2E family transporter BA_3414 PF08241 Methyltransferase domain BA_3416 PF07690 Major Facilitator Superfamily BA_3420 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_3422 PF01595 Cyclin M transmembrane N-terminal domain BA_3422 PF00571 CBS domain BA_3422 PF03471 Transporter associated domain BA_3423 PF13411 MerR HTH family regulatory protein BA_3424 PF00892 EamA-like transporter family BA_3425 PF00805 Pentapeptide repeats (8 copies) BA_3426 PF06906 Protein of unknown function (DUF1272) BA_3427 PF10282 Lactonase, 7-bladed beta-propeller BA_3428 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BA_3428 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BA_3429 PF02447 GntP family permease BA_3430 PF00923 Transaldolase/Fructose-6-phosphate aldolase BA_3431 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BA_3431 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA_3432 PF00456 Transketolase, thiamine diphosphate binding domain BA_3432 PF02779 Transketolase, pyrimidine binding domain BA_3432 PF02780 Transketolase, C-terminal domain BA_3433 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BA_3433 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BA_3434 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BA_3434 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BA_3435 PF08240 Alcohol dehydrogenase GroES-like domain BA_3435 PF00107 Zinc-binding dehydrogenase BA_3436 PF00296 Luciferase-like monooxygenase BA_3438 PF16197 Ketoacyl-synthetase C-terminal extension BA_3438 PF00698 Acyl transferase domain BA_3438 PF08240 Alcohol dehydrogenase GroES-like domain BA_3438 PF08659 KR domain BA_3438 PF14765 Polyketide synthase dehydratase BA_3438 PF02801 Beta-ketoacyl synthase, C-terminal domain BA_3438 PF00109 Beta-ketoacyl synthase, N-terminal domain BA_3438 PF00550 Phosphopantetheine attachment site BA_3440 PF00106 short chain dehydrogenase BA_3442 PF02868 Thermolysin metallopeptidase, alpha-helical domain BA_3442 PF03413 Peptidase propeptide and YPEB domain BA_3442 PF01447 Thermolysin metallopeptidase, catalytic domain BA_3442 PF07504 Fungalysin/Thermolysin Propeptide Motif BA_3446 PF00248 Aldo/keto reductase family BA_3447 PF07690 Major Facilitator Superfamily BA_3449 PF03928 Haem-degrading BA_3450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_3456 PF03960 ArsC family BA_3457 PF01638 HxlR-like helix-turn-helix BA_3458 PF07702 UTRA domain BA_3458 PF00392 Bacterial regulatory proteins, gntR family BA_3461 PF01638 HxlR-like helix-turn-helix BA_3462 PF01638 HxlR-like helix-turn-helix BA_3463 PF00248 Aldo/keto reductase family BA_3469 PF02567 Phenazine biosynthesis-like protein BA_3473 PF00501 AMP-binding enzyme BA_3473 PF13193 AMP-binding enzyme C-terminal domain BA_3475 PF01638 HxlR-like helix-turn-helix BA_3479 PF01022 Bacterial regulatory protein, arsR family BA_3480 PF01522 Polysaccharide deacetylase BA_3482 PF12791 Anti-sigma factor N-terminus BA_3483 PF04542 Sigma-70 region 2 BA_3485 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BA_3485 PF00535 Glycosyl transferase family 2 BA_3487 PF00440 Bacterial regulatory proteins, tetR family BA_3491 PF05656 Protein of unknown function (DUF805) BA_3492 PF01061 ABC-2 type transporter BA_3493 PF13732 Domain of unknown function (DUF4162) BA_3493 PF00005 ABC transporter BA_3497 PF03063 Prismane/CO dehydrogenase family BA_3500 PF00753 Metallo-beta-lactamase superfamily BA_3501 PF01183 Glycosyl hydrolases family 25 BA_3501 PF01471 Putative peptidoglycan binding domain BA_3506 PF00144 Beta-lactamase BA_3514 PF00753 Metallo-beta-lactamase superfamily BA_3516 PF00324 Amino acid permease BA_3518 PF07690 Major Facilitator Superfamily BA_3524 PF02585 GlcNAc-PI de-N-acetylase BA_3525 PF08830 Protein of unknown function (DUF1806) BA_3526 PF03600 Citrate transporter BA_3531 PF01497 Periplasmic binding protein BA_3533 PF01032 FecCD transport family BA_3534 PF01032 FecCD transport family BA_3535 PF05675 Protein of unknown function (DUF817) BA_3536 PF02567 Phenazine biosynthesis-like protein BA_3537 PF13170 Protein of unknown function (DUF4003) BA_3540 PF10901 Protein of unknown function (DUF2690) BA_3543 PF03466 LysR substrate binding domain BA_3543 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_3544 PF08240 Alcohol dehydrogenase GroES-like domain BA_3544 PF00107 Zinc-binding dehydrogenase BA_3547 PF01713 Smr domain BA_3547 PF00488 MutS domain V BA_3551 PF00128 Alpha amylase, catalytic domain BA_3551 PF09154 Domain of unknown function (DUF1939) BA_3553 PF01432 Peptidase family M3 BA_3553 PF08439 Oligopeptidase F BA_3554 PF00144 Beta-lactamase BA_3556 PF07690 Major Facilitator Superfamily BA_3557 PF03466 LysR substrate binding domain BA_3557 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_3560 PF03009 Glycerophosphoryl diester phosphodiesterase family BA_3564 PF01494 FAD binding domain BA_3565 PF01022 Bacterial regulatory protein, arsR family BA_3566 PF08240 Alcohol dehydrogenase GroES-like domain BA_3566 PF00107 Zinc-binding dehydrogenase BA_3567 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BA_3571 PF04299 Putative FMN-binding domain BA_3572 PF04229 GrpB protein BA_3574 PF01758 Sodium Bile acid symporter family BA_3575 PF02913 FAD linked oxidases, C-terminal domain BA_3575 PF01565 FAD binding domain BA_3580 PF00132 Bacterial transferase hexapeptide (six repeats) BA_3581 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BA_3582 PF00535 Glycosyl transferase family 2 BA_3583 PF00378 Enoyl-CoA hydratase/isomerase BA_3584 PF01752 Collagenase BA_3584 PF08453 Peptidase family M9 N-terminal BA_3584 PF18496 Collagenase G catalytic helper subdomain BA_3585 PF02308 MgtC family BA_3587 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_3588 PF04294 VanW like protein BA_3590 PF13039 Protein of unknown function (DUF3900) BA_3590 PF13037 Domain of unknown function (DUF3898) BA_3594 PF00313 'Cold-shock' DNA-binding domain BA_3596 PF00258 Flavodoxin BA_3598 PF00293 NUDIX domain BA_3600 PF00132 Bacterial transferase hexapeptide (six repeats) BA_3602 PF00106 short chain dehydrogenase BA_3604 PF14698 Argininosuccinate lyase C-terminal BA_3604 PF00206 Lyase BA_3606 PF01156 Inosine-uridine preferring nucleoside hydrolase BA_3607 PF00474 Sodium:solute symporter family BA_3609 PF00171 Aldehyde dehydrogenase family BA_3611 PF14151 YfhD-like protein BA_3612 PF13249 Squalene-hopene cyclase N-terminal domain BA_3612 PF13243 Squalene-hopene cyclase C-terminal domain BA_3613 PF02681 Divergent PAP2 family BA_3614 PF00892 EamA-like transporter family BA_3615 PF06961 Protein of unknown function (DUF1294) BA_3620 PF10609 NUBPL iron-transfer P-loop NTPase BA_3622 PF02391 MoaE protein BA_3623 PF03454 MoeA C-terminal region (domain IV) BA_3623 PF03453 MoeA N-terminal region (domain I and II) BA_3623 PF00994 Probable molybdopterin binding domain BA_3624 PF00899 ThiF family BA_3625 PF01226 Formate/nitrite transporter BA_3627 PF04055 Radical SAM superfamily BA_3627 PF06463 Molybdenum Cofactor Synthesis C BA_3628 PF02634 FdhD/NarQ family BA_3629 PF10057 Uncharacterized conserved protein (DUF2294) BA_3630 PF07849 Protein of unknown function (DUF1641) BA_3631 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA_3631 PF00384 Molybdopterin oxidoreductase BA_3631 PF01568 Molydopterin dinucleotide binding domain BA_3631 PF00037 4Fe-4S binding domain BA_3631 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BA_3633 PF03323 Bacillus/Clostridium GerA spore germination protein BA_3641 PF08241 Methyltransferase domain BA_3642 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_3644 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_3645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_3647 PF03816 Cell envelope-related transcriptional attenuator domain BA_3649 PF04542 Sigma-70 region 2 BA_3649 PF08281 Sigma-70, region 4 BA_3653 PF00005 ABC transporter BA_3653 PF13732 Domain of unknown function (DUF4162) BA_3655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA_3655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA_3656 PF03989 DNA gyrase C-terminal domain, beta-propeller BA_3656 PF00521 DNA gyrase/topoisomerase IV, subunit A BA_3657 PF00986 DNA gyrase B subunit, carboxyl terminus BA_3657 PF01751 Toprim domain BA_3657 PF00204 DNA gyrase B BA_3657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_3659 PF13380 CoA binding domain BA_3660 PF13180 PDZ domain BA_3661 PF00486 Transcriptional regulatory protein, C terminal BA_3661 PF00072 Response regulator receiver domain BA_3663 PF03477 ATP cone domain BA_3663 PF13597 Anaerobic ribonucleoside-triphosphate reductase BA_3665 PF02660 Glycerol-3-phosphate acyltransferase BA_3666 PF01521 Iron-sulphur cluster biosynthesis BA_3667 PF03061 Thioesterase superfamily BA_3668 PF01476 LysM domain BA_3668 PF00704 Glycosyl hydrolases family 18 BA_3670 PF08177 Small acid-soluble spore protein N family BA_3671 PF13040 Fur-regulated basic protein B BA_3672 PF01336 OB-fold nucleic acid binding domain BA_3672 PF11490 DNA polymerase III polC-type N-terminus II BA_3672 PF00929 Exonuclease BA_3672 PF02811 PHP domain BA_3672 PF14579 Helix-hairpin-helix motif BA_3672 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA_3672 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA_3674 PF00578 AhpC/TSA family BA_3676 PF00664 ABC transporter transmembrane region BA_3676 PF00005 ABC transporter BA_3676 PF03412 Peptidase C39 family BA_3677 PF00694 Aconitase C-terminal domain BA_3677 PF00330 Aconitase family (aconitate hydratase) BA_3679 PF01522 Polysaccharide deacetylase BA_3682 PF07690 Major Facilitator Superfamily BA_3684 PF01411 tRNA synthetases class II (A) BA_3684 PF02272 DHHA1 domain BA_3684 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA_3685 PF13344 Haloacid dehalogenase-like hydrolase BA_3685 PF00293 NUDIX domain BA_3687 PF00108 Thiolase, N-terminal domain BA_3687 PF02803 Thiolase, C-terminal domain BA_3688 PF00501 AMP-binding enzyme BA_3688 PF13193 AMP-binding enzyme C-terminal domain BA_3689 PF02632 BioY family BA_3690 PF13193 AMP-binding enzyme C-terminal domain BA_3690 PF00501 AMP-binding enzyme BA_3694 PF05532 CsbD-like BA_3700 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_3700 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA_3702 PF00512 His Kinase A (phospho-acceptor) domain BA_3702 PF13426 PAS domain BA_3702 PF00989 PAS fold BA_3702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_3702 PF13188 PAS domain BA_3703 PF01738 Dienelactone hydrolase family BA_3704 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_3705 PF00474 Sodium:solute symporter family BA_3706 PF01645 Conserved region in glutamate synthase BA_3707 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA_3708 PF02559 CarD-like/TRCF domain BA_3709 PF00491 Arginase family BA_3710 PF01979 Amidohydrolase family BA_3711 PF17391 Urocanase N-terminal domain BA_3711 PF01175 Urocanase Rossmann-like domain BA_3711 PF17392 Urocanase C-terminal domain BA_3712 PF00221 Aromatic amino acid lyase BA_3713 PF09021 HutP BA_3714 PF01209 ubiE/COQ5 methyltransferase family BA_3719 PF11084 Protein of unknown function (DUF2621) BA_3726 PF07301 Protein of unknown function (DUF1453) BA_3727 PF02683 Cytochrome C biogenesis protein transmembrane region BA_3729 PF03466 LysR substrate binding domain BA_3729 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_3730 PF03788 LrgA family BA_3731 PF04172 LrgB-like family BA_3732 PF00293 NUDIX domain BA_3732 PF13344 Haloacid dehalogenase-like hydrolase BA_3737 PF01510 N-acetylmuramoyl-L-alanine amidase BA_3737 PF01471 Putative peptidoglycan binding domain BA_3740 PF00005 ABC transporter BA_3740 PF00664 ABC transporter transmembrane region BA_3741 PF00005 ABC transporter BA_3741 PF00664 ABC transporter transmembrane region BA_3742 PF03672 Uncharacterised protein family (UPF0154) BA_3743 PF10747 Sporulation inhibitor of replication protein SirA BA_3744 PF02780 Transketolase, C-terminal domain BA_3744 PF02779 Transketolase, pyrimidine binding domain BA_3744 PF00456 Transketolase, thiamine diphosphate binding domain BA_3745 PF12323 Helix-turn-helix domain BA_3745 PF01385 Probable transposase BA_3745 PF07282 Putative transposase DNA-binding domain BA_3747 PF00528 Binding-protein-dependent transport system inner membrane component BA_3748 PF00528 Binding-protein-dependent transport system inner membrane component BA_3749 PF00005 ABC transporter BA_3752 PF05979 Bacterial protein of unknown function (DUF896) BA_3753 PF00239 Resolvase, N terminal domain BA_3754 PF00717 Peptidase S24-like BA_3754 PF01726 LexA DNA binding domain BA_3757 PF03551 Transcriptional regulator PadR-like family BA_3767 PF01510 N-acetylmuramoyl-L-alanine amidase BA_3767 PF01476 LysM domain BA_3767 PF01471 Putative peptidoglycan binding domain BA_3768 PF05105 Bacteriophage holin family BA_3803 PF08281 Sigma-70, region 4 BA_3813 PF02511 Thymidylate synthase complementing protein BA_3814 PF00145 C-5 cytosine-specific DNA methylase BA_3829 PF01381 Helix-turn-helix BA_3833 PF03951 Glutamine synthetase, beta-Grasp domain BA_3833 PF00120 Glutamine synthetase, catalytic domain BA_3834 PF13411 MerR HTH family regulatory protein BA_3835 PF06838 Methionine gamma-lyase BA_3836 PF16360 GTP-binding GTPase Middle Region BA_3836 PF01926 50S ribosome-binding GTPase BA_3836 PF13167 GTP-binding GTPase N-terminal BA_3837 PF16360 GTP-binding GTPase Middle Region BA_3837 PF01926 50S ribosome-binding GTPase BA_3837 PF13167 GTP-binding GTPase N-terminal BA_3838 PF03458 UPF0126 domain BA_3839 PF17866 AAA lid domain BA_3839 PF00004 ATPase family associated with various cellular activities (AAA) BA_3842 PF17209 Hfq protein BA_3845 PF01476 LysM domain BA_3845 PF06725 3D domain BA_3846 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA_3846 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA_3847 PF00294 pfkB family carbohydrate kinase BA_3848 PF00455 DeoR C terminal sensor domain BA_3848 PF08220 DeoR-like helix-turn-helix domain BA_3850 PF04238 Protein of unknown function (DUF420) BA_3853 PF00324 Amino acid permease BA_3854 PF00041 Fibronectin type III domain BA_3854 PF00704 Glycosyl hydrolases family 18 BA_3856 PF00149 Calcineurin-like phosphoesterase BA_3856 PF10518 TAT (twin-arginine translocation) pathway signal sequence BA_3857 PF01226 Formate/nitrite transporter BA_3858 PF00216 Bacterial DNA-binding protein BA_3859 PF00403 Heavy-metal-associated domain BA_3860 PF00403 Heavy-metal-associated domain BA_3861 PF02583 Metal-sensitive transcriptional repressor BA_3863 PF00756 Putative esterase BA_3864 PF00005 ABC transporter BA_3865 PF01032 FecCD transport family BA_3866 PF01032 FecCD transport family BA_3868 PF03372 Endonuclease/Exonuclease/phosphatase family BA_3869 PF02805 Metal binding domain of Ada BA_3869 PF12833 Helix-turn-helix domain BA_3870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BA_3870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BA_3871 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BA_3871 PF00730 HhH-GPD superfamily base excision DNA repair protein BA_3872 PF07687 Peptidase dimerisation domain BA_3872 PF01546 Peptidase family M20/M25/M40 BA_3877 PF00561 alpha/beta hydrolase fold BA_3878 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_3879 PF00990 Diguanylate cyclase, GGDEF domain BA_3879 PF00563 EAL domain BA_3879 PF03707 Bacterial signalling protein N terminal repeat BA_3883 PF10787 Uncharacterised protein from bacillus cereus group BA_3884 PF04172 LrgB-like family BA_3885 PF03788 LrgA family BA_3886 PF00155 Aminotransferase class I and II BA_3886 PF00392 Bacterial regulatory proteins, gntR family BA_3887 PF00364 Biotin-requiring enzyme BA_3887 PF00561 alpha/beta hydrolase fold BA_3888 PF02585 GlcNAc-PI de-N-acetylase BA_3891 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BA_3892 PF00082 Subtilase family BA_3893 PF07486 Cell Wall Hydrolase BA_3894 PF03275 UDP-galactopyranose mutase BA_3895 PF00884 Sulfatase BA_3896 PF00350 Dynamin family BA_3898 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BA_3899 PF00512 His Kinase A (phospho-acceptor) domain BA_3899 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_3900 PF00072 Response regulator receiver domain BA_3900 PF00486 Transcriptional regulatory protein, C terminal BA_3903 PF00005 ABC transporter BA_3904 PF01119 DNA mismatch repair protein, C-terminal domain BA_3904 PF08676 MutL C terminal dimerisation domain BA_3905 PF05188 MutS domain II BA_3905 PF05190 MutS family domain IV BA_3905 PF05192 MutS domain III BA_3905 PF01624 MutS domain I BA_3905 PF00488 MutS domain V BA_3906 PF10628 Outer spore coat protein E (CotE) BA_3907 PF06133 Control of competence regulator ComK, YlbF/YmcA BA_3908 PF01938 TRAM domain BA_3908 PF04055 Radical SAM superfamily BA_3908 PF00919 Uncharacterized protein family UPF0004 BA_3909 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA_3910 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BA_3910 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BA_3910 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BA_3911 PF01244 Membrane dipeptidase (Peptidase family M19) BA_3912 PF04232 Stage V sporulation protein S (SpoVS) BA_3913 PF13277 YmdB-like protein BA_3914 PF01966 HD domain BA_3914 PF12072 Domain of unknown function (DUF3552) BA_3914 PF00013 KH domain BA_3916 PF02464 Competence-damaged protein BA_3916 PF18146 Damage-inducible protein CinA KH domain BA_3916 PF00994 Probable molybdopterin binding domain BA_3917 PF01066 CDP-alcohol phosphatidyltransferase BA_3918 PF13464 Domain of unknown function (DUF4115) BA_3919 PF11868 Protein of unknown function (DUF3388) BA_3920 PF11588 Protein of unknown function (DUF3243) BA_3922 PF05193 Peptidase M16 inactive domain BA_3922 PF00675 Insulinase (Peptidase family M16) BA_3923 PF05193 Peptidase M16 inactive domain BA_3926 PF00005 ABC transporter BA_3927 PF02608 ABC transporter substrate-binding protein PnrA-like BA_3928 PF00392 Bacterial regulatory proteins, gntR family BA_3928 PF07702 UTRA domain BA_3930 PF17854 FtsK alpha domain BA_3930 PF01580 FtsK/SpoIIIE family BA_3930 PF09397 Ftsk gamma domain BA_3931 PF14035 YlzJ-like protein BA_3932 PF00574 Clp protease BA_3933 PF00753 Metallo-beta-lactamase superfamily BA_3933 PF17770 Ribonuclease J C-terminal domain BA_3933 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BA_3935 PF00701 Dihydrodipicolinate synthetase family BA_3936 PF13840 ACT domain BA_3936 PF00696 Amino acid kinase family BA_3937 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA_3937 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA_3938 PF02441 Flavoprotein BA_3939 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BA_3939 PF16924 Dipicolinate synthase subunit A N-terminal domain BA_3941 PF05239 PRC-barrel domain BA_3942 PF05193 Peptidase M16 inactive domain BA_3942 PF00675 Insulinase (Peptidase family M16) BA_3943 PF01522 Polysaccharide deacetylase BA_3944 PF00575 S1 RNA binding domain BA_3944 PF03725 3' exoribonuclease family, domain 2 BA_3944 PF01138 3' exoribonuclease family, domain 1 BA_3944 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BA_3944 PF00013 KH domain BA_3945 PF00312 Ribosomal protein S15 BA_3946 PF01687 Riboflavin kinase BA_3946 PF06574 FAD synthetase BA_3947 PF01509 TruB family pseudouridylate synthase (N terminal domain) BA_3947 PF16198 tRNA pseudouridylate synthase B C-terminal domain BA_3948 PF02033 Ribosome-binding factor A BA_3949 PF04456 Protein of unknown function (DUF503) BA_3950 PF04760 Translation initiation factor IF-2, N-terminal region BA_3950 PF00009 Elongation factor Tu GTP binding domain BA_3950 PF11987 Translation-initiation factor 2 BA_3951 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BA_3952 PF04296 Protein of unknown function (DUF448) BA_3953 PF08529 NusA N-terminal domain BA_3953 PF13184 NusA-like KH domain BA_3953 PF00575 S1 RNA binding domain BA_3954 PF02576 RimP N-terminal domain BA_3954 PF17384 RimP C-terminal SH3 domain BA_3955 PF02811 PHP domain BA_3955 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA_3955 PF00929 Exonuclease BA_3955 PF11490 DNA polymerase III polC-type N-terminus II BA_3955 PF14480 DNA polymerase III polC-type N-terminus I BA_3955 PF14579 Helix-hairpin-helix motif BA_3955 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA_3957 PF03129 Anticodon binding domain BA_3957 PF04073 Aminoacyl-tRNA editing domain BA_3957 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA_3958 PF17820 PDZ domain BA_3958 PF02163 Peptidase family M50 BA_3959 PF13288 DXP reductoisomerase C-terminal domain BA_3959 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BA_3959 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BA_3961 PF01255 Putative undecaprenyl diphosphate synthase BA_3962 PF01765 Ribosome recycling factor BA_3963 PF00696 Amino acid kinase family BA_3964 PF00889 Elongation factor TS BA_3965 PF00318 Ribosomal protein S2 BA_3966 PF06018 CodY GAF-like domain BA_3966 PF08222 CodY helix-turn-helix domain BA_3967 PF07724 AAA domain (Cdc48 subfamily) BA_3967 PF10431 C-terminal, D2-small domain, of ClpB protein BA_3967 PF00004 ATPase family associated with various cellular activities (AAA) BA_3968 PF00227 Proteasome subunit BA_3969 PF02899 Phage integrase, N-terminal SAM-like domain BA_3969 PF00589 Phage integrase family BA_3970 PF01134 Glucose inhibited division protein A BA_3971 PF01751 Toprim domain BA_3971 PF01131 DNA topoisomerase BA_3971 PF01396 Topoisomerase DNA binding C4 zinc finger BA_3973 PF00549 CoA-ligase BA_3973 PF02629 CoA binding domain BA_3974 PF08442 ATP-grasp domain BA_3974 PF00549 CoA-ligase BA_3975 PF01351 Ribonuclease HII BA_3976 PF01926 50S ribosome-binding GTPase BA_3977 PF10502 Signal peptidase, peptidase S26 BA_3978 PF01245 Ribosomal protein L19 BA_3979 PF01746 tRNA (Guanine-1)-methyltransferase BA_3980 PF05239 PRC-barrel domain BA_3980 PF01782 RimM N-terminal domain BA_3982 PF00886 Ribosomal protein S16 BA_3983 PF00448 SRP54-type protein, GTPase domain BA_3983 PF02978 Signal peptide binding domain BA_3983 PF02881 SRP54-type protein, helical bundle domain BA_3984 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BA_3985 PF00448 SRP54-type protein, GTPase domain BA_3985 PF02881 SRP54-type protein, helical bundle domain BA_3986 PF02463 RecF/RecN/SMC N terminal domain BA_3986 PF06470 SMC proteins Flexible Hinge Domain BA_3987 PF00035 Double-stranded RNA binding motif BA_3987 PF14622 Ribonuclease-III-like BA_3988 PF00550 Phosphopantetheine attachment site BA_3990 PF00698 Acyl transferase domain BA_3991 PF02504 Fatty acid synthesis protein BA_3992 PF03061 Thioesterase superfamily BA_3993 PF17191 RecG wedge domain BA_3993 PF00271 Helicase conserved C-terminal domain BA_3993 PF00270 DEAD/DEAH box helicase BA_3994 PF13684 Dihydroxyacetone kinase family BA_3994 PF02734 DAK2 domain BA_3995 PF03780 Asp23 family, cell envelope-related function BA_3996 PF00830 Ribosomal L28 family BA_3997 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BA_3997 PF04263 Thiamin pyrophosphokinase, catalytic domain BA_3998 PF00834 Ribulose-phosphate 3 epimerase family BA_3999 PF16745 RsgA N-terminal domain BA_3999 PF03193 RsgA GTPase BA_4000 PF00069 Protein kinase domain BA_4000 PF03793 PASTA domain BA_4002 PF04055 Radical SAM superfamily BA_4003 PF01029 NusB family BA_4003 PF01189 16S rRNA methyltransferase RsmB/F BA_4004 PF02911 Formyl transferase, C-terminal domain BA_4004 PF00551 Formyl transferase BA_4005 PF01327 Polypeptide deformylase BA_4006 PF18074 Primosomal protein N C-terminal domain BA_4006 PF17764 3′ DNA-binding domain (3′BD) BA_4006 PF04851 Type III restriction enzyme, res subunit BA_4006 PF00271 Helicase conserved C-terminal domain BA_4006 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BA_4007 PF04127 DNA / pantothenate metabolism flavoprotein BA_4007 PF02441 Flavoprotein BA_4008 PF01192 RNA polymerase Rpb6 BA_4009 PF00625 Guanylate kinase BA_4010 PF04025 Domain of unknown function (DUF370) BA_4011 PF08340 Domain of unknown function (DUF1732) BA_4011 PF03755 YicC-like family, N-terminal region BA_4012 PF00690 Cation transporter/ATPase, N-terminus BA_4012 PF00689 Cation transporting ATPase, C-terminus BA_4013 PF05670 NFACT protein RNA binding domain BA_4014 PF01321 Creatinase/Prolidase N-terminal domain BA_4014 PF00557 Metallopeptidase family M24 BA_4021 PF00156 Phosphoribosyl transferase domain BA_4022 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BA_4023 PF01180 Dihydroorotate dehydrogenase BA_4024 PF00175 Oxidoreductase NAD-binding domain BA_4024 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BA_4025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA_4025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BA_4025 PF02142 MGS-like domain BA_4026 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BA_4026 PF00117 Glutamine amidotransferase class-I BA_4027 PF01979 Amidohydrolase family BA_4028 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BA_4028 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BA_4029 PF00860 Permease family BA_4030 PF00156 Phosphoribosyl transferase domain BA_4031 PF01479 S4 domain BA_4031 PF00849 RNA pseudouridylate synthase BA_4032 PF01252 Signal peptidase (SPase) II BA_4034 PF08264 Anticodon-binding domain of tRNA BA_4034 PF00133 tRNA synthetases class I (I, L, M and V) BA_4034 PF06827 Zinc finger found in FPG and IleRS BA_4035 PF05103 DivIVA protein BA_4036 PF01479 S4 domain BA_4036 PF17774 Putative RNA-binding domain in YlmH BA_4037 PF02325 YGGT family BA_4038 PF04472 Cell division protein SepF BA_4039 PF01168 Alanine racemase, N-terminal domain BA_4040 PF02578 Multi-copper polyphenol oxidoreductase laccase BA_4041 PF05239 PRC-barrel domain BA_4042 PF04542 Sigma-70 region 2 BA_4042 PF04539 Sigma-70 region 3 BA_4042 PF04545 Sigma-70, region 4 BA_4043 PF04545 Sigma-70, region 4 BA_4043 PF04542 Sigma-70 region 2 BA_4044 PF03419 Sporulation factor SpoIIGA BA_4045 PF12327 FtsZ family, C-terminal domain BA_4045 PF00091 Tubulin/FtsZ family, GTPase domain BA_4046 PF02491 SHS2 domain inserted in FTSA BA_4047 PF08478 POTRA domain, FtsQ-type BA_4047 PF03799 Cell division protein FtsQ BA_4048 PF01565 FAD binding domain BA_4048 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BA_4049 PF04101 Glycosyltransferase family 28 C-terminal domain BA_4049 PF03033 Glycosyltransferase family 28 N-terminal domain BA_4050 PF01098 Cell cycle protein BA_4051 PF08245 Mur ligase middle domain BA_4051 PF02875 Mur ligase family, glutamate ligase domain BA_4052 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BA_4052 PF00953 Glycosyl transferase family 4 BA_4053 PF01225 Mur ligase family, catalytic domain BA_4053 PF08245 Mur ligase middle domain BA_4053 PF02875 Mur ligase family, glutamate ligase domain BA_4054 PF00905 Penicillin binding protein transpeptidase domain BA_4054 PF03717 Penicillin-binding Protein dimerisation domain BA_4054 PF03793 PASTA domain BA_4055 PF03793 PASTA domain BA_4055 PF00905 Penicillin binding protein transpeptidase domain BA_4055 PF03717 Penicillin-binding Protein dimerisation domain BA_4056 PF04977 Septum formation initiator BA_4057 PF01795 MraW methylase family BA_4058 PF10079 Bacillithiol biosynthesis BshC BA_4059 PF02558 Ketopantoate reductase PanE/ApbA BA_4059 PF08546 Ketopantoate reductase PanE/ApbA C terminal BA_4060 PF00583 Acetyltransferase (GNAT) family BA_4062 PF01783 Ribosomal L32p protein family BA_4063 PF02620 Large ribosomal RNA subunit accumulation protein YceD BA_4073 PF12123 N-acetylmuramoyl-l-alanine amidase BA_4073 PF01510 N-acetylmuramoyl-L-alanine amidase BA_4074 PF05105 Bacteriophage holin family BA_4092 PF00574 Clp protease BA_4094 PF03354 Phage Terminase BA_4098 PF10137 Predicted nucleotide-binding protein containing TIR-like domain BA_4099 PF00589 Phage integrase family BA_4109 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_4112 PF00692 dUTPase BA_4115 PF04542 Sigma-70 region 2 BA_4115 PF04539 Sigma-70 region 3 BA_4115 PF04545 Sigma-70, region 4 BA_4120 PF07319 Primosomal protein DnaI N-terminus BA_4120 PF01695 IstB-like ATP binding protein BA_4126 PF01381 Helix-turn-helix BA_4130 PF01381 Helix-turn-helix BA_4134 PF00589 Phage integrase family BA_4134 PF14659 Phage integrase, N-terminal SAM-like domain BA_4135 PF05636 HIGH Nucleotidyl Transferase BA_4136 PF05362 Lon protease (S16) C-terminal proteolytic domain BA_4136 PF13180 PDZ domain BA_4137 PF01734 Patatin-like phospholipase BA_4138 PF07670 Nucleoside recognition BA_4139 PF01467 Cytidylyltransferase-like BA_4142 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BA_4143 PF06133 Control of competence regulator ComK, YlbF/YmcA BA_4144 PF00300 Histidine phosphatase superfamily (branch 1) BA_4145 PF14003 YlbE-like protein BA_4146 PF14071 Putative coat protein BA_4147 PF00188 Cysteine-rich secretory protein family BA_4147 PF14504 CAP-associated N-terminal BA_4148 PF08868 YugN-like family BA_4149 PF00795 Carbon-nitrogen hydrolase BA_4150 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BA_4151 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BA_4152 PF00510 Cytochrome c oxidase subunit III BA_4153 PF00115 Cytochrome C and Quinol oxidase polypeptide I BA_4154 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BA_4154 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BA_4154 PF00034 Cytochrome c BA_4155 PF01040 UbiA prenyltransferase family BA_4156 PF02628 Cytochrome oxidase assembly protein BA_4157 PF00364 Biotin-requiring enzyme BA_4157 PF00289 Biotin carboxylase, N-terminal domain BA_4157 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA_4157 PF02785 Biotin carboxylase C-terminal domain BA_4157 PF02436 Conserved carboxylase domain BA_4157 PF00682 HMGL-like BA_4158 PF01098 Cell cycle protein BA_4159 PF07408 Protein of unknown function (DUF1507) BA_4161 PF02562 PhoH-like protein BA_4161 PF13638 PIN domain BA_4163 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BA_4165 PF14036 YlaH-like protein BA_4166 PF03144 Elongation factor Tu domain 2 BA_4166 PF00009 Elongation factor Tu GTP binding domain BA_4166 PF00679 Elongation factor G C-terminus BA_4166 PF14492 Elongation Factor G, domain II BA_4168 PF00459 Inositol monophosphatase family BA_4170 PF06335 Protein of unknown function (DUF1054) BA_4171 PF05256 Uncharacterised protein family (UPF0223) BA_4172 PF01276 Orn/Lys/Arg decarboxylase, major domain BA_4172 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BA_4181 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA_4181 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_4182 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA_4182 PF00364 Biotin-requiring enzyme BA_4182 PF02817 e3 binding domain BA_4183 PF02780 Transketolase, C-terminal domain BA_4183 PF02779 Transketolase, pyrimidine binding domain BA_4184 PF00676 Dehydrogenase E1 component BA_4187 PF01327 Polypeptide deformylase BA_4189 PF07288 Protein of unknown function (DUF1447) BA_4190 PF00753 Metallo-beta-lactamase superfamily BA_4190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BA_4190 PF17770 Ribonuclease J C-terminal domain BA_4191 PF02254 TrkA-N domain BA_4191 PF02080 TrkA-C domain BA_4193 PF01546 Peptidase family M20/M25/M40 BA_4193 PF07687 Peptidase dimerisation domain BA_4194 PF00132 Bacterial transferase hexapeptide (six repeats) BA_4194 PF14602 Hexapeptide repeat of succinyl-transferase BA_4194 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BA_4195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_4195 PF03466 LysR substrate binding domain BA_4198 PF04308 Ribonuclease H-like BA_4200 PF08796 Protein of unknown function (DUF1797) BA_4203 PF00563 EAL domain BA_4203 PF10388 EAL-domain associated signalling protein domain BA_4205 PF00149 Calcineurin-like phosphoesterase BA_4205 PF10518 TAT (twin-arginine translocation) pathway signal sequence BA_4208 PF13089 Polyphosphate kinase N-terminal domain BA_4208 PF02503 Polyphosphate kinase middle domain BA_4208 PF17941 Polyphosphate kinase C-terminal domain 1 BA_4208 PF13090 Polyphosphate kinase C-terminal domain 2 BA_4209 PF02541 Ppx/GppA phosphatase family BA_4210 PF14177 YkyB-like protein BA_4216 PF07690 Major Facilitator Superfamily BA_4218 PF01717 Cobalamin-independent synthase, Catalytic domain BA_4218 PF08267 Cobalamin-independent synthase, N-terminal domain BA_4220 PF14040 Deoxyribonuclease NucA/NucB BA_4223 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_4223 PF00512 His Kinase A (phospho-acceptor) domain BA_4225 PF00155 Aminotransferase class I and II BA_4226 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BA_4226 PF00356 Bacterial regulatory proteins, lacI family BA_4227 PF00528 Binding-protein-dependent transport system inner membrane component BA_4228 PF00528 Binding-protein-dependent transport system inner membrane component BA_4229 PF13416 Bacterial extracellular solute-binding protein BA_4230 PF00128 Alpha amylase, catalytic domain BA_4230 PF02903 Alpha amylase, N-terminal ig-like domain BA_4230 PF16657 Maltogenic Amylase, C-terminal domain BA_4231 PF16657 Maltogenic Amylase, C-terminal domain BA_4231 PF00128 Alpha amylase, catalytic domain BA_4232 PF03459 TOBE domain BA_4232 PF17912 MalK OB fold domain BA_4232 PF00005 ABC transporter BA_4240 PF02803 Thiolase, C-terminal domain BA_4240 PF00108 Thiolase, N-terminal domain BA_4241 PF00293 NUDIX domain BA_4248 PF03551 Transcriptional regulator PadR-like family BA_4251 PF01008 Initiation factor 2 subunit family BA_4252 PF01636 Phosphotransferase enzyme family BA_4253 PF00795 Carbon-nitrogen hydrolase BA_4254 PF00155 Aminotransferase class I and II BA_4255 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BA_4255 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BA_4257 PF00596 Class II Aldolase and Adducin N-terminal domain BA_4258 PF03079 ARD/ARD' family BA_4263 PF08448 PAS fold BA_4263 PF00990 Diguanylate cyclase, GGDEF domain BA_4264 PF00881 Nitroreductase family BA_4267 PF00391 PEP-utilising enzyme, mobile domain BA_4267 PF05524 PEP-utilising enzyme, N-terminal BA_4267 PF02896 PEP-utilising enzyme, TIM barrel domain BA_4268 PF00381 PTS HPr component phosphorylation site BA_4269 PF02378 Phosphotransferase system, EIIC BA_4269 PF00367 phosphotransferase system, EIIB BA_4269 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA_4270 PF03123 CAT RNA binding domain BA_4270 PF00874 PRD domain BA_4272 PF00392 Bacterial regulatory proteins, gntR family BA_4272 PF07702 UTRA domain BA_4273 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BA_4274 PF01979 Amidohydrolase family BA_4276 PF04079 Segregation and condensation complex subunit ScpB BA_4278 PF02616 Segregation and condensation protein ScpA BA_4280 PF03745 Domain of unknown function (DUF309) BA_4281 PF00583 Acetyltransferase (GNAT) family BA_4283 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BA_4284 PF06207 Protein of unknown function (DUF1002) BA_4286 PF03323 Bacillus/Clostridium GerA spore germination protein BA_4288 PF07451 Stage V sporulation protein AD (SpoVAD) BA_4289 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BA_4290 PF13782 Stage V sporulation protein AB BA_4291 PF12164 Stage V sporulation protein AA BA_4293 PF00209 Sodium:neurotransmitter symporter family BA_4294 PF04539 Sigma-70 region 3 BA_4294 PF04545 Sigma-70, region 4 BA_4294 PF04542 Sigma-70 region 2 BA_4295 PF13581 Histidine kinase-like ATPase domain BA_4296 PF01740 STAS domain BA_4297 PF00768 D-alanyl-D-alanine carboxypeptidase BA_4297 PF07943 Penicillin-binding protein 5, C-terminal domain BA_4298 PF00392 Bacterial regulatory proteins, gntR family BA_4299 PF00005 ABC transporter BA_4303 PF01047 MarR family BA_4305 PF00860 Permease family BA_4306 PF01544 CorA-like Mg2+ transporter protein BA_4307 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BA_4307 PF00591 Glycosyl transferase family, a/b domain BA_4307 PF02885 Glycosyl transferase family, helical bundle domain BA_4308 PF01048 Phosphorylase superfamily BA_4309 PF01676 Metalloenzyme superfamily BA_4311 PF00589 Phage integrase family BA_4311 PF02899 Phage integrase, N-terminal SAM-like domain BA_4312 PF14004 Protein of unknown function (DUF4227) BA_4313 PF01475 Ferric uptake regulator family BA_4314 PF01944 Stage II sporulation protein M BA_4316 PF00293 NUDIX domain BA_4317 PF13072 Mother cell inhibitor of FtsZ BA_4318 PF00248 Aldo/keto reductase family BA_4319 PF00248 Aldo/keto reductase family BA_4320 PF04229 GrpB protein BA_4320 PF13673 Acetyltransferase (GNAT) domain BA_4322 PF02872 5'-nucleotidase, C-terminal domain BA_4322 PF00565 Staphylococcal nuclease homologue BA_4322 PF00746 LPXTG cell wall anchor motif BA_4322 PF00149 Calcineurin-like phosphoesterase BA_4324 PF12146 Serine aminopeptidase, S33 BA_4325 PF03553 Na+/H+ antiporter family BA_4325 PF13726 Na+-H+ antiporter family BA_4326 PF00356 Bacterial regulatory proteins, lacI family BA_4327 PF00583 Acetyltransferase (GNAT) family BA_4328 PF12146 Serine aminopeptidase, S33 BA_4329 PF10827 Protein of unknown function (DUF2552) BA_4331 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA_4331 PF01872 RibD C-terminal domain BA_4332 PF00677 Lumazine binding domain BA_4333 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BA_4333 PF00925 GTP cyclohydrolase II BA_4334 PF00885 6,7-dimethyl-8-ribityllumazine synthase BA_4336 PF06968 Biotin and Thiamin Synthesis associated domain BA_4336 PF04055 Radical SAM superfamily BA_4337 PF13847 Methyltransferase domain BA_4338 PF12697 Alpha/beta hydrolase family BA_4338 PF08241 Methyltransferase domain BA_4339 PF00155 Aminotransferase class I and II BA_4341 PF00202 Aminotransferase class-III BA_4345 PF03553 Na+/H+ antiporter family BA_4346 PF02872 5'-nucleotidase, C-terminal domain BA_4346 PF00149 Calcineurin-like phosphoesterase BA_4348 PF13404 AsnC-type helix-turn-helix domain BA_4348 PF01037 Lrp/AsnC ligand binding domain BA_4351 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BA_4351 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BA_4352 PF00202 Aminotransferase class-III BA_4353 PF00696 Amino acid kinase family BA_4354 PF01960 ArgJ family BA_4355 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA_4355 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA_4357 PF00106 short chain dehydrogenase BA_4359 PF03807 NADP oxidoreductase coenzyme F420-dependent BA_4359 PF14748 Pyrroline-5-carboxylate reductase dimerisation BA_4360 PF03313 Serine dehydratase alpha chain BA_4361 PF01842 ACT domain BA_4361 PF03315 Serine dehydratase beta chain BA_4364 PF12706 Beta-lactamase superfamily domain BA_4364 PF00753 Metallo-beta-lactamase superfamily BA_4366 PF11799 impB/mucB/samB family C-terminal domain BA_4366 PF00817 impB/mucB/samB family BA_4366 PF11798 IMS family HHH motif BA_4368 PF01546 Peptidase family M20/M25/M40 BA_4368 PF07687 Peptidase dimerisation domain BA_4369 PF13302 Acetyltransferase (GNAT) domain BA_4372 PF03734 L,D-transpeptidase catalytic domain BA_4373 PF11728 Putative aromatic acid exporter C-terminal domain BA_4373 PF06081 Aromatic acid exporter family member 1 BA_4374 PF00005 ABC transporter BA_4375 PF00528 Binding-protein-dependent transport system inner membrane component BA_4376 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA_4378 PF06491 Disulphide isomerase BA_4379 PF11208 Protein of unknown function (DUF2992) BA_4380 PF00293 NUDIX domain BA_4380 PF09297 NADH pyrophosphatase zinc ribbon domain BA_4381 PF01098 Cell cycle protein BA_4382 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA_4382 PF00364 Biotin-requiring enzyme BA_4382 PF02817 e3 binding domain BA_4383 PF02779 Transketolase, pyrimidine binding domain BA_4383 PF02780 Transketolase, C-terminal domain BA_4384 PF00676 Dehydrogenase E1 component BA_4385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA_4385 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_4386 PF00871 Acetokinase family BA_4387 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BA_4387 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BA_4388 PF01515 Phosphate acetyl/butaryl transferase BA_4389 PF00158 Sigma-54 interaction domain BA_4389 PF00989 PAS fold BA_4389 PF02954 Bacterial regulatory protein, Fis family BA_4391 PF03009 Glycerophosphoryl diester phosphodiesterase family BA_4392 PF14174 YycC-like protein BA_4394 PF00072 Response regulator receiver domain BA_4394 PF08769 Sporulation initiation factor Spo0A C terminal BA_4396 PF05580 SpoIVB peptidase S55 BA_4396 PF17820 PDZ domain BA_4397 PF13476 AAA domain BA_4398 PF02863 Arginine repressor, C-terminal domain BA_4398 PF01316 Arginine repressor, DNA binding domain BA_4399 PF01728 FtsJ-like methyltransferase BA_4399 PF01479 S4 domain BA_4400 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BA_4400 PF02780 Transketolase, C-terminal domain BA_4400 PF02779 Transketolase, pyrimidine binding domain BA_4402 PF00348 Polyprenyl synthetase BA_4403 PF02609 Exonuclease VII small subunit BA_4404 PF02601 Exonuclease VII, large subunit BA_4404 PF13742 OB-fold nucleic acid binding domain BA_4405 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BA_4405 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BA_4406 PF01029 NusB family BA_4407 PF03780 Asp23 family, cell envelope-related function BA_4408 PF00289 Biotin carboxylase, N-terminal domain BA_4408 PF02785 Biotin carboxylase C-terminal domain BA_4408 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA_4409 PF00364 Biotin-requiring enzyme BA_4410 PF12685 SpoIIIAH-like protein BA_4412 PF09581 Stage III sporulation protein AF (Spore_III_AF) BA_4413 PF09546 Stage III sporulation protein AE (spore_III_AE) BA_4414 PF06686 Stage III sporulation protein AC/AD protein family BA_4415 PF06686 Stage III sporulation protein AC/AD protein family BA_4416 PF09548 Stage III sporulation protein AB (spore_III_AB) BA_4421 PF01132 Elongation factor P (EF-P) OB domain BA_4421 PF08207 Elongation factor P (EF-P) KOW-like domain BA_4421 PF09285 Elongation factor P, C-terminal BA_4422 PF01321 Creatinase/Prolidase N-terminal domain BA_4422 PF00557 Metallopeptidase family M24 BA_4423 PF01220 Dehydroquinase class II BA_4424 PF11085 Conserved membrane protein YqhR BA_4425 PF07136 Protein of unknown function (DUF1385) BA_4427 PF13419 Haloacid dehalogenase-like hydrolase BA_4428 PF02742 Iron dependent repressor, metal binding and dimerisation domain BA_4428 PF01325 Iron dependent repressor, N-terminal DNA binding domain BA_4431 PF03099 Biotin/lipoate A/B protein ligase family BA_4432 PF00581 Rhodanese-like domain BA_4433 PF00356 Bacterial regulatory proteins, lacI family BA_4433 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BA_4435 PF00893 Small Multidrug Resistance protein BA_4436 PF00893 Small Multidrug Resistance protein BA_4444 PF00005 ABC transporter BA_4445 PF00392 Bacterial regulatory proteins, gntR family BA_4447 PF02347 Glycine cleavage system P-protein BA_4448 PF02347 Glycine cleavage system P-protein BA_4449 PF08669 Glycine cleavage T-protein C-terminal barrel domain BA_4449 PF01571 Aminomethyltransferase folate-binding domain BA_4450 PF00271 Helicase conserved C-terminal domain BA_4450 PF00176 SNF2 family N-terminal domain BA_4451 PF11079 Bacterial protein YqhG of unknown function BA_4456 PF14038 YqzE-like protein BA_4457 PF01202 Shikimate kinase BA_4463 PF07963 Prokaryotic N-terminal methylation motif BA_4465 PF00482 Type II secretion system (T2SS), protein F BA_4466 PF00437 Type II/IV secretion system protein BA_4468 PF11117 Protein of unknown function (DUF2626) BA_4469 PF00375 Sodium:dicarboxylate symporter family BA_4477 PF04101 Glycosyltransferase family 28 C-terminal domain BA_4477 PF03033 Glycosyltransferase family 28 N-terminal domain BA_4478 PF02965 Vitamin B12 dependent methionine synthase, activation domain BA_4478 PF02607 B12 binding domain BA_4478 PF02310 B12 binding domain BA_4478 PF02574 Homocysteine S-methyltransferase BA_4478 PF00809 Pterin binding enzyme BA_4479 PF02219 Methylenetetrahydrofolate reductase BA_4479 PF02574 Homocysteine S-methyltransferase BA_4480 PF01053 Cys/Met metabolism PLP-dependent enzyme BA_4481 PF01053 Cys/Met metabolism PLP-dependent enzyme BA_4483 PF01022 Bacterial regulatory protein, arsR family BA_4485 PF00753 Metallo-beta-lactamase superfamily BA_4486 PF10958 Protein of unknown function (DUF2759) BA_4487 PF00480 ROK family BA_4488 PF06014 Bacterial protein of unknown function (DUF910) BA_4489 PF01812 5-formyltetrahydrofolate cyclo-ligase family BA_4490 PF00471 Ribosomal protein L33 BA_4491 PF00483 Nucleotidyl transferase BA_4492 PF01895 PhoU domain BA_4493 PF00005 ABC transporter BA_4494 PF00528 Binding-protein-dependent transport system inner membrane component BA_4495 PF00528 Binding-protein-dependent transport system inner membrane component BA_4496 PF12849 PBP superfamily domain BA_4497 PF00905 Penicillin binding protein transpeptidase domain BA_4497 PF03717 Penicillin-binding Protein dimerisation domain BA_4498 PF07690 Major Facilitator Superfamily BA_4499 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BA_4499 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BA_4502 PF04551 GcpE protein BA_4503 PF01475 Ferric uptake regulator family BA_4504 PF00950 ABC 3 transport family BA_4505 PF00005 ABC transporter BA_4506 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA_4506 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_4507 PF11116 Protein of unknown function (DUF2624) BA_4508 PF01261 Xylose isomerase-like TIM barrel BA_4509 PF00270 DEAD/DEAH box helicase BA_4509 PF00271 Helicase conserved C-terminal domain BA_4511 PF02401 LytB protein BA_4512 PF01784 NIF3 (NGG1p interacting factor 3) BA_4513 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BA_4514 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA_4515 PF00140 Sigma-70 factor, region 1.2 BA_4515 PF04539 Sigma-70 region 3 BA_4515 PF04545 Sigma-70, region 4 BA_4515 PF03979 Sigma-70 factor, region 1.1 BA_4515 PF04542 Sigma-70 region 2 BA_4516 PF10410 DnaB-helicase binding domain of primase BA_4516 PF08275 DNA primase catalytic core, N-terminal domain BA_4516 PF01807 CHC2 zinc finger BA_4520 PF03618 Kinase/pyrophosphorylase BA_4521 PF08279 HTH domain BA_4521 PF00571 CBS domain BA_4522 PF11967 Recombination protein O N terminal BA_4522 PF02565 Recombination protein O C terminal BA_4524 PF07650 KH domain BA_4524 PF01926 50S ribosome-binding GTPase BA_4525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA_4526 PF01219 Prokaryotic diacylglycerol kinase BA_4527 PF02130 Uncharacterized protein family UPF0054 BA_4528 PF01966 HD domain BA_4528 PF07697 7TM-HD extracellular BA_4528 PF07698 7TM receptor with intracellular HD hydrolase BA_4529 PF02562 PhoH-like protein BA_4530 PF06898 Putative stage IV sporulation protein YqfD BA_4532 PF07873 YabP family BA_4533 PF09424 Yqey-like protein BA_4534 PF01165 Ribosomal protein S21 BA_4535 PF04055 Radical SAM superfamily BA_4535 PF00919 Uncharacterized protein family UPF0004 BA_4535 PF01938 TRAM domain BA_4536 PF04452 RNA methyltransferase BA_4538 PF00226 DnaJ domain BA_4538 PF00684 DnaJ central domain BA_4538 PF01556 DnaJ C terminal domain BA_4539 PF00012 Hsp70 protein BA_4540 PF01025 GrpE BA_4541 PF01628 HrcA protein C terminal domain BA_4542 PF06969 HemN C-terminal domain BA_4542 PF04055 Radical SAM superfamily BA_4543 PF01638 HxlR-like helix-turn-helix BA_4544 PF06421 GTP-binding protein LepA C-terminus BA_4544 PF00009 Elongation factor Tu GTP binding domain BA_4544 PF00679 Elongation factor G C-terminus BA_4544 PF03144 Elongation factor Tu domain 2 BA_4546 PF03418 Germination protease BA_4547 PF01649 Ribosomal protein S20 BA_4548 PF06144 DNA polymerase III, delta subunit BA_4550 PF14141 YqzM-like protein BA_4551 PF00753 Metallo-beta-lactamase superfamily BA_4551 PF13567 Domain of unknown function (DUF4131) BA_4551 PF03772 Competence protein BA_4552 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA_4553 PF10531 SLBB domain BA_4554 PF03807 NADP oxidoreductase coenzyme F420-dependent BA_4554 PF14748 Pyrroline-5-carboxylate reductase dimerisation BA_4555 PF13649 Methyltransferase domain BA_4557 PF01966 HD domain BA_4558 PF01467 Cytidylyltransferase-like BA_4560 PF01985 CRS1 / YhbY (CRM) domain BA_4561 PF01488 Shikimate / quinate 5-dehydrogenase BA_4561 PF08501 Shikimate dehydrogenase substrate binding domain BA_4561 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BA_4562 PF01926 50S ribosome-binding GTPase BA_4565 PF02666 Phosphatidylserine decarboxylase BA_4566 PF04545 Sigma-70, region 4 BA_4566 PF04542 Sigma-70 region 2 BA_4569 PF16244 Domain of unknown function (DUF4901) BA_4570 PF00471 Ribosomal protein L33 BA_4571 PF00881 Nitroreductase family BA_4572 PF04607 Region found in RelA / SpoT proteins BA_4574 PF00245 Alkaline phosphatase BA_4577 PF00561 alpha/beta hydrolase fold BA_4577 PF08386 TAP-like protein BA_4584 PF13860 FlgD Ig-like domain BA_4584 PF00082 Subtilase family BA_4584 PF02225 PA domain BA_4584 PF05922 Peptidase inhibitor I9 BA_4586 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BA_4589 PF07681 DoxX BA_4595 PF00005 ABC transporter BA_4596 PF01032 FecCD transport family BA_4597 PF01497 Periplasmic binding protein BA_4598 PF14143 YrhC-like protein BA_4599 PF00171 Aldehyde dehydrogenase family BA_4599 PF00465 Iron-containing alcohol dehydrogenase BA_4600 PF01053 Cys/Met metabolism PLP-dependent enzyme BA_4601 PF00291 Pyridoxal-phosphate dependent enzyme BA_4602 PF01048 Phosphorylase superfamily BA_4603 PF08241 Methyltransferase domain BA_4606 PF00905 Penicillin binding protein transpeptidase domain BA_4606 PF03717 Penicillin-binding Protein dimerisation domain BA_4607 PF03449 Transcription elongation factor, N-terminal BA_4607 PF01272 Transcription elongation factor, GreA/GreB, C-term BA_4608 PF00485 Phosphoribulokinase / Uridine kinase family BA_4609 PF01136 Peptidase family U32 BA_4609 PF16325 Peptidase family U32 C-terminal domain BA_4610 PF01136 Peptidase family U32 BA_4611 PF01596 O-methyltransferase BA_4612 PF02618 YceG-like family BA_4613 PF06949 Protein of unknown function (DUF1292) BA_4614 PF03652 Holliday junction resolvase BA_4615 PF06135 IreB regulatory phosphoprotein BA_4616 PF01411 tRNA synthetases class II (A) BA_4616 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA_4616 PF02272 DHHA1 domain BA_4618 PF01594 AI-2E family transporter BA_4622 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BA_4622 PF13538 UvrD-like helicase C-terminal domain BA_4622 PF14490 Helix-hairpin-helix containing domain BA_4626 PF00266 Aminotransferase class-V BA_4627 PF02082 Transcriptional regulator BA_4628 PF16193 AAA C-terminal domain BA_4628 PF12002 MgsA AAA+ ATPase C terminal BA_4628 PF05496 Holliday junction DNA helicase RuvB P-loop domain BA_4630 PF00899 ThiF family BA_4632 PF01336 OB-fold nucleic acid binding domain BA_4632 PF00152 tRNA synthetases class II (D, K and N) BA_4632 PF02938 GAD domain BA_4633 PF03129 Anticodon binding domain BA_4633 PF13393 Histidyl-tRNA synthetase BA_4636 PF02580 D-Tyr-tRNA(Tyr) deacylase BA_4637 PF13291 ACT domain BA_4637 PF04607 Region found in RelA / SpoT proteins BA_4637 PF02824 TGS domain BA_4638 PF00156 Phosphoribosyl transferase domain BA_4639 PF01368 DHH family BA_4639 PF02272 DHHA1 domain BA_4639 PF17768 RecJ OB domain BA_4639 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BA_4640 PF01545 Cation efflux family BA_4640 PF16916 Dimerisation domain of Zinc Transporter BA_4641 PF07549 SecD/SecF GG Motif BA_4641 PF02355 Protein export membrane protein BA_4642 PF13797 Post-transcriptional regulator BA_4643 PF01943 Polysaccharide biosynthesis protein BA_4643 PF14667 Polysaccharide biosynthesis C-terminal domain BA_4644 PF04239 Protein of unknown function (DUF421) BA_4646 PF02699 Preprotein translocase subunit BA_4647 PF01702 Queuine tRNA-ribosyltransferase BA_4648 PF02547 Queuosine biosynthesis protein BA_4649 PF11146 Protein of unknown function (DUF2905) BA_4650 PF05491 RuvB C-terminal winged helix domain BA_4650 PF05496 Holliday junction DNA helicase RuvB P-loop domain BA_4650 PF17864 RuvB AAA lid domain BA_4651 PF07499 RuvA, C-terminal domain BA_4651 PF01330 RuvA N terminal domain BA_4652 PF01497 Periplasmic binding protein BA_4655 PF01022 Bacterial regulatory protein, arsR family BA_4659 PF01476 LysM domain BA_4660 PF02445 Quinolinate synthetase A protein BA_4661 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BA_4661 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BA_4662 PF02910 Fumarate reductase flavoprotein C-term BA_4662 PF00890 FAD binding domain BA_4663 PF00266 Aminotransferase class-V BA_4664 PF02829 3H domain BA_4664 PF08279 HTH domain BA_4665 PF03475 3-alpha domain BA_4665 PF03473 MOSC domain BA_4666 PF01842 ACT domain BA_4666 PF00800 Prephenate dehydratase BA_4667 PF02687 FtsX-like permease family BA_4668 PF02687 FtsX-like permease family BA_4669 PF00005 ABC transporter BA_4671 PF00486 Transcriptional regulatory protein, C terminal BA_4671 PF00072 Response regulator receiver domain BA_4672 PF09269 Domain of unknown function (DUF1967) BA_4672 PF01926 50S ribosome-binding GTPase BA_4672 PF01018 GTP1/OBG BA_4673 PF14682 Sporulation initiation phospho-transferase B, C-terminal BA_4673 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BA_4674 PF01016 Ribosomal L27 protein BA_4675 PF04327 Cysteine protease Prp BA_4676 PF00829 Ribosomal prokaryotic L21 protein BA_4677 PF10150 Ribonuclease E/G family BA_4677 PF00575 S1 RNA binding domain BA_4678 PF02163 Peptidase family M50 BA_4679 PF01551 Peptidase family M23 BA_4680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BA_4681 PF03775 Septum formation inhibitor MinC, C-terminal domain BA_4683 PF04085 rod shape-determining protein MreC BA_4685 PF04002 RadC-like JAB domain BA_4686 PF02545 Maf-like protein BA_4689 PF02875 Mur ligase family, glutamate ligase domain BA_4689 PF08245 Mur ligase middle domain BA_4690 PF00133 tRNA synthetases class I (I, L, M and V) BA_4690 PF10458 Valyl tRNA synthetase tRNA binding arm BA_4690 PF08264 Anticodon-binding domain of tRNA BA_4692 PF01476 LysM domain BA_4693 PF00202 Aminotransferase class-III BA_4694 PF00490 Delta-aminolevulinic acid dehydratase BA_4695 PF02602 Uroporphyrinogen-III synthase HemD BA_4696 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BA_4696 PF03900 Porphobilinogen deaminase, C-terminal domain BA_4697 PF01578 Cytochrome C assembly protein BA_4698 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BA_4698 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BA_4698 PF01488 Shikimate / quinate 5-dehydrogenase BA_4699 PF01047 MarR family BA_4700 PF02566 OsmC-like protein BA_4701 PF01926 50S ribosome-binding GTPase BA_4702 PF00004 ATPase family associated with various cellular activities (AAA) BA_4702 PF05362 Lon protease (S16) C-terminal proteolytic domain BA_4702 PF02190 ATP-dependent protease La (LON) substrate-binding domain BA_4703 PF00004 ATPase family associated with various cellular activities (AAA) BA_4703 PF05362 Lon protease (S16) C-terminal proteolytic domain BA_4704 PF07724 AAA domain (Cdc48 subfamily) BA_4704 PF06689 ClpX C4-type zinc finger BA_4704 PF10431 C-terminal, D2-small domain, of ClpB protein BA_4705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA_4705 PF05698 Bacterial trigger factor protein (TF) C-terminus BA_4705 PF05697 Bacterial trigger factor protein (TF) BA_4710 PF11724 YvbH-like oligomerisation region BA_4710 PF08000 Bacterial PH domain BA_4713 PF12850 Calcineurin-like phosphoesterase superfamily domain BA_4714 PF01725 Ham1 family BA_4715 PF01138 3' exoribonuclease family, domain 1 BA_4715 PF03725 3' exoribonuclease family, domain 2 BA_4716 PF10646 Sporulation and spore germination BA_4717 PF01177 Asp/Glu/Hydantoin racemase BA_4718 PF07690 Major Facilitator Superfamily BA_4721 PF00440 Bacterial regulatory proteins, tetR family BA_4724 PF00196 Bacterial regulatory proteins, luxR family BA_4725 PF00860 Permease family BA_4727 PF07969 Amidohydrolase family BA_4728 PF07969 Amidohydrolase family BA_4729 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA_4731 PF00528 Binding-protein-dependent transport system inner membrane component BA_4731 PF12911 N-terminal TM domain of oligopeptide transport permease C BA_4732 PF00528 Binding-protein-dependent transport system inner membrane component BA_4733 PF00005 ABC transporter BA_4733 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA_4734 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA_4734 PF00005 ABC transporter BA_4736 PF04397 LytTr DNA-binding domain BA_4736 PF00072 Response regulator receiver domain BA_4739 PF04024 PspC domain BA_4740 PF01381 Helix-turn-helix BA_4740 PF07883 Cupin domain BA_4741 PF13536 Putative multidrug resistance efflux transporter BA_4742 PF00230 Major intrinsic protein BA_4743 PF02082 Transcriptional regulator BA_4745 PF13732 Domain of unknown function (DUF4162) BA_4745 PF00005 ABC transporter BA_4746 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BA_4748 PF01618 MotA/TolQ/ExbB proton channel family BA_4750 PF02557 D-alanyl-D-alanine carboxypeptidase BA_4751 PF03061 Thioesterase superfamily BA_4753 PF13085 2Fe-2S iron-sulfur cluster binding domain BA_4753 PF13183 4Fe-4S dicluster domain BA_4754 PF00890 FAD binding domain BA_4754 PF02910 Fumarate reductase flavoprotein C-term BA_4755 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BA_4756 PF10702 Protein of unknown function (DUF2507) BA_4757 PF08459 UvrC Helix-hairpin-helix N-terminal BA_4757 PF01541 GIY-YIG catalytic domain BA_4757 PF02151 UvrB/uvrC motif BA_4758 PF00085 Thioredoxin BA_4759 PF00766 Electron transfer flavoprotein FAD-binding domain BA_4759 PF01012 Electron transfer flavoprotein domain BA_4760 PF01012 Electron transfer flavoprotein domain BA_4761 PF00378 Enoyl-CoA hydratase/isomerase BA_4762 PF08359 YsiA-like protein, C-terminal region BA_4762 PF00440 Bacterial regulatory proteins, tetR family BA_4763 PF13193 AMP-binding enzyme C-terminal domain BA_4763 PF00501 AMP-binding enzyme BA_4766 PF01497 Periplasmic binding protein BA_4767 PF01032 FecCD transport family BA_4768 PF05163 DinB family BA_4774 PF00005 ABC transporter BA_4776 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_4776 PF00512 His Kinase A (phospho-acceptor) domain BA_4777 PF00486 Transcriptional regulatory protein, C terminal BA_4777 PF00072 Response regulator receiver domain BA_4779 PF09962 Uncharacterized conserved protein (DUF2196) BA_4780 PF10672 S-adenosylmethionine-dependent methyltransferase BA_4780 PF17785 PUA-like domain BA_4782 PF03992 Antibiotic biosynthesis monooxygenase BA_4783 PF04203 Sortase domain BA_4784 PF00005 ABC transporter BA_4785 PF01032 FecCD transport family BA_4786 PF01497 Periplasmic binding protein BA_4787 PF05031 Iron Transport-associated domain BA_4789 PF05031 Iron Transport-associated domain BA_4790 PF05525 Branched-chain amino acid transport protein BA_4792 PF00849 RNA pseudouridylate synthase BA_4792 PF01479 S4 domain BA_4794 PF00488 MutS domain V BA_4794 PF01713 Smr domain BA_4795 PF14791 DNA polymerase beta thumb BA_4795 PF02811 PHP domain BA_4795 PF14716 Helix-hairpin-helix domain BA_4796 PF02674 Colicin V production protein BA_4797 PF05164 Cell division protein ZapA BA_4798 PF11858 Domain of unknown function (DUF3378) BA_4798 PF01351 Ribonuclease HII BA_4802 PF00152 tRNA synthetases class II (D, K and N) BA_4802 PF01336 OB-fold nucleic acid binding domain BA_4803 PF03483 B3/4 domain BA_4803 PF03147 Ferredoxin-fold anticodon binding domain BA_4803 PF01588 Putative tRNA binding domain BA_4803 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BA_4803 PF03484 tRNA synthetase B5 domain BA_4804 PF01409 tRNA synthetases class II core domain (F) BA_4804 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BA_4805 PF08032 RNA 2'-O ribose methyltransferase substrate binding BA_4805 PF00588 SpoU rRNA Methylase family BA_4806 PF14098 Small, acid-soluble spore protein I BA_4807 PF01966 HD domain BA_4812 PF07690 Major Facilitator Superfamily BA_4814 PF16859 Tetracyclin repressor-like, C-terminal domain BA_4814 PF00440 Bacterial regulatory proteins, tetR family BA_4815 PF05343 M42 glutamyl aminopeptidase BA_4817 PF00453 Ribosomal protein L20 BA_4818 PF01632 Ribosomal protein L35 BA_4819 PF05198 Translation initiation factor IF-3, N-terminal domain BA_4819 PF00707 Translation initiation factor IF-3, C-terminal domain BA_4820 PF03129 Anticodon binding domain BA_4820 PF02824 TGS domain BA_4820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA_4820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA_4821 PF08812 YtxC-like family BA_4822 PF07319 Primosomal protein DnaI N-terminus BA_4822 PF01695 IstB-like ATP binding protein BA_4823 PF07261 Replication initiation and membrane attachment BA_4824 PF03477 ATP cone domain BA_4825 PF02675 S-adenosylmethionine decarboxylase BA_4827 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA_4827 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA_4828 PF01121 Dephospho-CoA kinase BA_4829 PF02659 Putative manganese efflux pump BA_4830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BA_4830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BA_4830 PF06827 Zinc finger found in FPG and IleRS BA_4831 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BA_4831 PF01367 5'-3' exonuclease, C-terminal SAM fold BA_4831 PF00476 DNA polymerase family A BA_4832 PF00989 PAS fold BA_4832 PF16736 Single Cache-like BA_4832 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_4832 PF00512 His Kinase A (phospho-acceptor) domain BA_4833 PF00072 Response regulator receiver domain BA_4833 PF00486 Transcriptional regulatory protein, C terminal BA_4837 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BA_4837 PF00056 lactate/malate dehydrogenase, NAD binding domain BA_4838 PF00180 Isocitrate/isopropylmalate dehydrogenase BA_4839 PF00285 Citrate synthase, C-terminal domain BA_4840 PF04284 Protein of unknown function (DUF441) BA_4841 PF01594 AI-2E family transporter BA_4842 PF04186 FxsA cytoplasmic membrane protein BA_4843 PF00224 Pyruvate kinase, barrel domain BA_4843 PF02887 Pyruvate kinase, alpha/beta domain BA_4843 PF00391 PEP-utilising enzyme, mobile domain BA_4844 PF00365 Phosphofructokinase BA_4845 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BA_4846 PF17848 Acetyl-coA carboxylase zinc finger domain BA_4846 PF01039 Carboxyl transferase domain BA_4847 PF00392 Bacterial regulatory proteins, gntR family BA_4848 PF03949 Malic enzyme, NAD binding domain BA_4848 PF00390 Malic enzyme, N-terminal domain BA_4849 PF02811 PHP domain BA_4849 PF01336 OB-fold nucleic acid binding domain BA_4849 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA_4849 PF14579 Helix-hairpin-helix motif BA_4849 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA_4850 PF14034 Sporulation protein YtrH BA_4852 PF01368 DHH family BA_4852 PF02272 DHHA1 domain BA_4854 PF14007 YtpI-like protein BA_4858 PF00571 CBS domain BA_4858 PF03061 Thioesterase superfamily BA_4858 PF07085 DRTGG domain BA_4858 PF00392 Bacterial regulatory proteins, gntR family BA_4861 PF00557 Metallopeptidase family M24 BA_4861 PF01321 Creatinase/Prolidase N-terminal domain BA_4862 PF11518 Protein of unknown function (DUF3221) BA_4868 PF12746 GNAT acetyltransferase BA_4869 PF07883 Cupin domain BA_4871 PF01381 Helix-turn-helix BA_4873 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BA_4873 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BA_4875 PF00582 Universal stress protein family BA_4879 PF14698 Argininosuccinate lyase C-terminal BA_4879 PF00206 Lyase BA_4880 PF00764 Arginosuccinate synthase BA_4884 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_4884 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA_4885 PF12787 EcsC protein family BA_4888 PF00871 Acetokinase family BA_4889 PF02384 N-6 DNA Methylase BA_4890 PF08534 Redoxin BA_4891 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BA_4893 PF01513 ATP-NAD kinase BA_4894 PF07969 Amidohydrolase family BA_4896 PF13193 AMP-binding enzyme C-terminal domain BA_4896 PF00501 AMP-binding enzyme BA_4898 PF00269 Small, acid-soluble spore proteins, alpha/beta type BA_4899 PF02926 THUMP domain BA_4899 PF02568 Thiamine biosynthesis protein (ThiI) BA_4900 PF00266 Aminotransferase class-V BA_4901 PF06160 Septation ring formation regulator, EzrA BA_4902 PF03466 LysR substrate binding domain BA_4902 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_4903 PF00892 EamA-like transporter family BA_4905 PF13185 GAF domain BA_4906 PF01053 Cys/Met metabolism PLP-dependent enzyme BA_4908 PF01479 S4 domain BA_4908 PF00163 Ribosomal protein S4/S9 N-terminal domain BA_4911 PF00579 tRNA synthetases class I (W and Y) BA_4911 PF01479 S4 domain BA_4913 PF04542 Sigma-70 region 2 BA_4913 PF08281 Sigma-70, region 4 BA_4915 PF13193 AMP-binding enzyme C-terminal domain BA_4915 PF00501 AMP-binding enzyme BA_4916 PF00583 Acetyltransferase (GNAT) family BA_4917 PF00571 CBS domain BA_4918 PF00850 Histone deacetylase domain BA_4920 PF00486 Transcriptional regulatory protein, C terminal BA_4920 PF00072 Response regulator receiver domain BA_4921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_4921 PF00672 HAMP domain BA_4921 PF00512 His Kinase A (phospho-acceptor) domain BA_4921 PF13426 PAS domain BA_4922 PF12796 Ankyrin repeats (3 copies) BA_4923 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA_4924 PF01741 Large-conductance mechanosensitive channel, MscL BA_4929 PF00356 Bacterial regulatory proteins, lacI family BA_4930 PF07537 CamS sex pheromone cAM373 precursor BA_4931 PF11009 Protein of unknown function (DUF2847) BA_4933 PF02073 Thermophilic metalloprotease (M29) BA_4937 PF13302 Acetyltransferase (GNAT) domain BA_4938 PF08245 Mur ligase middle domain BA_4938 PF01225 Mur ligase family, catalytic domain BA_4938 PF02875 Mur ligase family, glutamate ligase domain BA_4940 PF01580 FtsK/SpoIIIE family BA_4940 PF17854 FtsK alpha domain BA_4940 PF09397 Ftsk gamma domain BA_4943 PF14794 Domain of unknown function (DUF4479) BA_4943 PF01588 Putative tRNA binding domain BA_4944 PF07285 Protein of unknown function (DUF1444) BA_4945 PF00085 Thioredoxin BA_4946 PF01931 Protein of unknown function DUF84 BA_4947 PF05343 M42 glutamyl aminopeptidase BA_4949 PF00753 Metallo-beta-lactamase superfamily BA_4950 PF02390 Putative methyltransferase BA_4951 PF14165 YtzH-like protein BA_4952 PF01636 Phosphotransferase enzyme family BA_4953 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BA_4953 PF00128 Alpha amylase, catalytic domain BA_4953 PF17999 Pullulanase N1-terminal domain BA_4955 PF02834 LigT like Phosphoesterase BA_4957 PF08220 DeoR-like helix-turn-helix domain BA_4958 PF01479 S4 domain BA_4958 PF00849 RNA pseudouridylate synthase BA_4959 PF14667 Polysaccharide biosynthesis C-terminal domain BA_4959 PF01943 Polysaccharide biosynthesis protein BA_4961 PF07690 Major Facilitator Superfamily BA_4962 PF01022 Bacterial regulatory protein, arsR family BA_4963 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BA_4965 PF10957 Sporulation protein Cse60 BA_4967 PF02559 CarD-like/TRCF domain BA_4969 PF06800 Sugar transport protein BA_4972 PF02391 MoaE protein BA_4973 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BA_4974 PF03453 MoeA N-terminal region (domain I and II) BA_4974 PF00994 Probable molybdopterin binding domain BA_4974 PF03454 MoeA C-terminal region (domain IV) BA_4975 PF01967 MoaC family BA_4976 PF00899 ThiF family BA_4981 PF00581 Rhodanese-like domain BA_4983 PF00561 alpha/beta hydrolase fold BA_4984 PF03323 Bacillus/Clostridium GerA spore germination protein BA_4985 PF03845 Spore germination protein BA_4991 PF00133 tRNA synthetases class I (I, L, M and V) BA_4991 PF09334 tRNA synthetases class I (M) BA_4991 PF13603 Leucyl-tRNA synthetase, Domain 2 BA_4991 PF08264 Anticodon-binding domain of tRNA BA_4992 PF07690 Major Facilitator Superfamily BA_4993 PF00999 Sodium/hydrogen exchanger family BA_4994 PF02080 TrkA-C domain BA_4995 PF00589 Phage integrase family BA_4997 PF00005 ABC transporter BA_4998 PF04235 Protein of unknown function (DUF418) BA_4998 PF07786 Protein of unknown function (DUF1624) BA_5000 PF10732 Protein of unknown function (DUF2524) BA_5001 PF04055 Radical SAM superfamily BA_5001 PF16199 Radical_SAM C-terminal domain BA_5002 PF06962 Putative rRNA methylase BA_5003 PF13732 Domain of unknown function (DUF4162) BA_5003 PF00005 ABC transporter BA_5005 PF01177 Asp/Glu/Hydantoin racemase BA_5008 PF10776 Protein of unknown function (DUF2600) BA_5009 PF12146 Serine aminopeptidase, S33 BA_5010 PF00132 Bacterial transferase hexapeptide (six repeats) BA_5011 PF01569 PAP2 superfamily BA_5012 PF13439 Glycosyltransferase Family 4 BA_5012 PF00534 Glycosyl transferases group 1 BA_5013 PF12804 MobA-like NTP transferase domain BA_5014 PF00994 Probable molybdopterin binding domain BA_5017 PF02772 S-adenosylmethionine synthetase, central domain BA_5017 PF02773 S-adenosylmethionine synthetase, C-terminal domain BA_5017 PF00438 S-adenosylmethionine synthetase, N-terminal domain BA_5019 PF01293 Phosphoenolpyruvate carboxykinase BA_5027 PF01784 NIF3 (NGG1p interacting factor 3) BA_5028 PF13426 PAS domain BA_5028 PF13188 PAS domain BA_5028 PF00989 PAS fold BA_5028 PF00512 His Kinase A (phospho-acceptor) domain BA_5028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_5029 PF00989 PAS fold BA_5029 PF08447 PAS fold BA_5029 PF00512 His Kinase A (phospho-acceptor) domain BA_5029 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_5030 PF00561 alpha/beta hydrolase fold BA_5030 PF08386 TAP-like protein BA_5031 PF00884 Sulfatase BA_5037 PF00005 ABC transporter BA_5038 PF00528 Binding-protein-dependent transport system inner membrane component BA_5043 PF00293 NUDIX domain BA_5047 PF02664 S-Ribosylhomocysteinase (LuxS) BA_5048 PF01809 Putative membrane protein insertion efficiency factor BA_5049 PF00484 Carbonic anhydrase BA_5050 PF01654 Cytochrome bd terminal oxidase subunit I BA_5051 PF02322 Cytochrome bd terminal oxidase subunit II BA_5052 PF10676 Spore germination protein gerPA/gerPF BA_5056 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA_5056 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_5061 PF04012 PspA/IM30 family BA_5064 PF17910 FeoB cytosolic helical domain BA_5064 PF02421 Ferrous iron transport protein B BA_5064 PF07664 Ferrous iron transport protein B C terminus BA_5064 PF07670 Nucleoside recognition BA_5066 PF09515 Thiamine transporter protein (Thia_YuaJ) BA_5067 PF00512 His Kinase A (phospho-acceptor) domain BA_5067 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_5067 PF00672 HAMP domain BA_5068 PF00072 Response regulator receiver domain BA_5068 PF00486 Transcriptional regulatory protein, C terminal BA_5074 PF00156 Phosphoribosyl transferase domain BA_5075 PF00781 Diacylglycerol kinase catalytic domain BA_5079 PF00248 Aldo/keto reductase family BA_5082 PF09335 SNARE associated Golgi protein BA_5083 PF00398 Ribosomal RNA adenine dimethylase BA_5084 PF02687 FtsX-like permease family BA_5085 PF00005 ABC transporter BA_5086 PF06445 GyrI-like small molecule binding domain BA_5086 PF12833 Helix-turn-helix domain BA_5087 PF00486 Transcriptional regulatory protein, C terminal BA_5087 PF00072 Response regulator receiver domain BA_5088 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_5090 PF02687 FtsX-like permease family BA_5091 PF00005 ABC transporter BA_5095 PF02447 GntP family permease BA_5096 PF07702 UTRA domain BA_5096 PF00392 Bacterial regulatory proteins, gntR family BA_5098 PF07071 KDGP aldolase BA_5099 PF03841 L-seryl-tRNA selenium transferase BA_5100 PF01979 Amidohydrolase family BA_5104 PF02557 D-alanyl-D-alanine carboxypeptidase BA_5105 PF00512 His Kinase A (phospho-acceptor) domain BA_5105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_5106 PF00486 Transcriptional regulatory protein, C terminal BA_5106 PF00072 Response regulator receiver domain BA_5107 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BA_5107 PF13378 Enolase C-terminal domain-like BA_5108 PF13193 AMP-binding enzyme C-terminal domain BA_5108 PF00501 AMP-binding enzyme BA_5109 PF00378 Enoyl-CoA hydratase/isomerase BA_5110 PF00561 alpha/beta hydrolase fold BA_5111 PF16582 Middle domain of thiamine pyrophosphate BA_5111 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA_5111 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA_5112 PF00425 chorismate binding enzyme BA_5113 PF01040 UbiA prenyltransferase family BA_5114 PF01258 Prokaryotic dksA/traR C4-type zinc finger BA_5115 PF00313 'Cold-shock' DNA-binding domain BA_5119 PF00343 Carbohydrate phosphorylase BA_5120 PF08323 Starch synthase catalytic domain BA_5120 PF00534 Glycosyl transferases group 1 BA_5121 PF00483 Nucleotidyl transferase BA_5122 PF00483 Nucleotidyl transferase BA_5123 PF00128 Alpha amylase, catalytic domain BA_5123 PF02806 Alpha amylase, C-terminal all-beta domain BA_5123 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BA_5125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BA_5125 PF00056 lactate/malate dehydrogenase, NAD binding domain BA_5127 PF02308 MgtC family BA_5128 PF02254 TrkA-N domain BA_5128 PF07885 Ion channel BA_5129 PF08868 YugN-like family BA_5130 PF00342 Phosphoglucose isomerase BA_5131 PF04070 Domain of unknown function (DUF378) BA_5132 PF00575 S1 RNA binding domain BA_5133 PF00155 Aminotransferase class I and II BA_5134 PF01037 Lrp/AsnC ligand binding domain BA_5135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA_5135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA_5136 PF08386 TAP-like protein BA_5136 PF00561 alpha/beta hydrolase fold BA_5138 PF00155 Aminotransferase class I and II BA_5141 PF08810 Kinase associated protein B BA_5142 PF00929 Exonuclease BA_5143 PF03600 Citrate transporter BA_5147 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA_5147 PF03129 Anticodon binding domain BA_5148 PF03061 Thioesterase superfamily BA_5150 PF02632 BioY family BA_5152 PF00483 Nucleotidyl transferase BA_5153 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA_5153 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA_5153 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA_5153 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA_5154 PF10372 Bacterial membrane-spanning protein N-terminus BA_5154 PF02457 DisA bacterial checkpoint controller nucleotide-binding BA_5155 PF02789 Cytosol aminopeptidase family, N-terminal domain BA_5155 PF00883 Cytosol aminopeptidase family, catalytic domain BA_5156 PF06725 3D domain BA_5158 PF13344 Haloacid dehalogenase-like hydrolase BA_5158 PF00293 NUDIX domain BA_5159 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_5160 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_5162 PF06445 GyrI-like small molecule binding domain BA_5165 PF04463 Protein of unknown function (DUF523) BA_5169 PF01521 Iron-sulphur cluster biosynthesis BA_5170 PF01678 Diaminopimelate epimerase BA_5172 PF07293 Protein of unknown function (DUF1450) BA_5173 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_5175 PF00005 ABC transporter BA_5175 PF09383 NIL domain BA_5176 PF03649 Uncharacterised protein family (UPF0014) BA_5177 PF03831 PhnA domain BA_5177 PF08274 PhnA Zinc-Ribbon BA_5184 PF01909 Nucleotidyltransferase domain BA_5184 PF13427 Domain of unknown function (DUF4111) BA_5185 PF07315 Protein of unknown function (DUF1462) BA_5186 PF01106 NifU-like domain BA_5189 PF04608 Phosphatidylglycerophosphatase A BA_5191 PF02525 Flavodoxin-like fold BA_5192 PF13344 Haloacid dehalogenase-like hydrolase BA_5194 PF01934 Protein of unknown function DUF86 BA_5195 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BA_5198 PF06265 Protein of unknown function (DUF1027) BA_5199 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BA_5200 PF07739 TipAS antibiotic-recognition domain BA_5200 PF13411 MerR HTH family regulatory protein BA_5201 PF10086 YhfC intramembrane metalloprotease BA_5205 PF04055 Radical SAM superfamily BA_5205 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BA_5206 PF01551 Peptidase family M23 BA_5208 PF08827 Domain of unknown function (DUF1805) BA_5209 PF02872 5'-nucleotidase, C-terminal domain BA_5211 PF03551 Transcriptional regulator PadR-like family BA_5212 PF04892 VanZ like family BA_5213 PF01458 Uncharacterized protein family (UPF0051) BA_5214 PF01592 NifU-like N terminal domain BA_5215 PF00266 Aminotransferase class-V BA_5216 PF01458 Uncharacterized protein family (UPF0051) BA_5217 PF00005 ABC transporter BA_5219 PF03180 NLPA lipoprotein BA_5220 PF03180 NLPA lipoprotein BA_5221 PF00528 Binding-protein-dependent transport system inner membrane component BA_5222 PF00005 ABC transporter BA_5222 PF09383 NIL domain BA_5225 PF00085 Thioredoxin BA_5226 PF01751 Toprim domain BA_5228 PF01597 Glycine cleavage H-protein BA_5229 PF03960 ArsC family BA_5240 PF00056 lactate/malate dehydrogenase, NAD binding domain BA_5240 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BA_5244 PF13305 Tetracyclin repressor-like, C-terminal domain BA_5244 PF00440 Bacterial regulatory proteins, tetR family BA_5245 PF00753 Metallo-beta-lactamase superfamily BA_5246 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA_5246 PF02770 Acyl-CoA dehydrogenase, middle domain BA_5246 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA_5248 PF00108 Thiolase, N-terminal domain BA_5248 PF02803 Thiolase, C-terminal domain BA_5249 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA_5249 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA_5249 PF00378 Enoyl-CoA hydratase/isomerase BA_5251 PF14115 YuzL-like protein BA_5252 PF00768 D-alanyl-D-alanine carboxypeptidase BA_5252 PF07943 Penicillin-binding protein 5, C-terminal domain BA_5253 PF01619 Proline dehydrogenase BA_5254 PF10835 Protein of unknown function (DUF2573) BA_5255 PF01910 Thiamine-binding protein BA_5256 PF02743 Cache domain BA_5256 PF00672 HAMP domain BA_5256 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_5260 PF07690 Major Facilitator Superfamily BA_5261 PF13520 Amino acid permease BA_5263 PF02096 60Kd inner membrane protein BA_5265 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA_5265 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA_5272 PF09335 SNARE associated Golgi protein BA_5274 PF03734 L,D-transpeptidase catalytic domain BA_5274 PF17969 L,D-transpeptidase C-terminal domain BA_5275 PF00486 Transcriptional regulatory protein, C terminal BA_5275 PF00072 Response regulator receiver domain BA_5276 PF00989 PAS fold BA_5276 PF00512 His Kinase A (phospho-acceptor) domain BA_5276 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_5276 PF16736 Single Cache-like BA_5278 PF08264 Anticodon-binding domain of tRNA BA_5278 PF09334 tRNA synthetases class I (M) BA_5280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_5280 PF00672 HAMP domain BA_5280 PF02743 Cache domain BA_5281 PF01883 Iron-sulfur cluster assembly protein BA_5282 PF01447 Thermolysin metallopeptidase, catalytic domain BA_5282 PF03413 Peptidase propeptide and YPEB domain BA_5282 PF07504 Fungalysin/Thermolysin Propeptide Motif BA_5282 PF02868 Thermolysin metallopeptidase, alpha-helical domain BA_5283 PF17954 Quercetinase C-terminal cupin domain BA_5283 PF02678 Pirin BA_5284 PF01047 MarR family BA_5286 PF00999 Sodium/hydrogen exchanger family BA_5287 PF02080 TrkA-C domain BA_5289 PF01235 Sodium:alanine symporter family BA_5290 PF00210 Ferritin-like domain BA_5294 PF03641 Possible lysine decarboxylase BA_5296 PF00210 Ferritin-like domain BA_5298 PF07662 Na+ dependent nucleoside transporter C-terminus BA_5298 PF01773 Na+ dependent nucleoside transporter N-terminus BA_5299 PF01773 Na+ dependent nucleoside transporter N-terminus BA_5299 PF07662 Na+ dependent nucleoside transporter C-terminus BA_5300 PF01235 Sodium:alanine symporter family BA_5301 PF01235 Sodium:alanine symporter family BA_5302 PF13460 NAD(P)H-binding BA_5308 PF00248 Aldo/keto reductase family BA_5309 PF07690 Major Facilitator Superfamily BA_5311 PF01638 HxlR-like helix-turn-helix BA_5312 PF07849 Protein of unknown function (DUF1641) BA_5313 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_5314 PF01479 S4 domain BA_5314 PF00579 tRNA synthetases class I (W and Y) BA_5315 PF01565 FAD binding domain BA_5315 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BA_5317 PF17202 Single cache domain 3 BA_5317 PF00672 HAMP domain BA_5317 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_5319 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BA_5320 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BA_5323 PF13302 Acetyltransferase (GNAT) domain BA_5324 PF06146 Phosphate-starvation-inducible E BA_5327 PF00005 ABC transporter BA_5328 PF01032 FecCD transport family BA_5329 PF01032 FecCD transport family BA_5331 PF00072 Response regulator receiver domain BA_5331 PF00486 Transcriptional regulatory protein, C terminal BA_5332 PF01668 SmpB protein BA_5334 PF08206 Ribonuclease B OB domain BA_5334 PF00773 RNB domain BA_5334 PF17876 Cold shock domain BA_5334 PF00575 S1 RNA binding domain BA_5335 PF12146 Serine aminopeptidase, S33 BA_5336 PF03840 Preprotein translocase SecG subunit BA_5338 PF01156 Inosine-uridine preferring nucleoside hydrolase BA_5358 PF04860 Phage portal protein BA_5363 PF02899 Phage integrase, N-terminal SAM-like domain BA_5363 PF00589 Phage integrase family BA_5364 PF00113 Enolase, C-terminal TIM barrel domain BA_5364 PF03952 Enolase, N-terminal domain BA_5365 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BA_5365 PF01676 Metalloenzyme superfamily BA_5366 PF00121 Triosephosphate isomerase BA_5367 PF00162 Phosphoglycerate kinase BA_5369 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA_5369 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA_5370 PF04198 Putative sugar-binding domain BA_5372 PF04552 Sigma-54, DNA binding domain BA_5372 PF04963 Sigma-54 factor, core binding domain BA_5372 PF00309 Sigma-54 factor, Activator interacting domain (AID) BA_5375 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BA_5376 PF07451 Stage V sporulation protein AD (SpoVAD) BA_5377 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BA_5379 PF04239 Protein of unknown function (DUF421) BA_5380 PF00574 Clp protease BA_5381 PF00381 PTS HPr component phosphorylation site BA_5382 PF14527 WhiA LAGLIDADG-like domain BA_5382 PF10298 WhiA N-terminal LAGLIDADG-like domain BA_5382 PF02650 WhiA C-terminal HTH domain BA_5383 PF01933 Uncharacterised protein family UPF0052 BA_5384 PF03668 P-loop ATPase protein family BA_5385 PF00293 NUDIX domain BA_5387 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA_5389 PF14602 Hexapeptide repeat of succinyl-transferase BA_5390 PF13419 Haloacid dehalogenase-like hydrolase BA_5391 PF01790 Prolipoprotein diacylglyceryl transferase BA_5392 PF02603 HPr Serine kinase N terminus BA_5392 PF07475 HPr Serine kinase C-terminal domain BA_5393 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BA_5395 PF17760 UvrA interaction domain BA_5395 PF00005 ABC transporter BA_5395 PF17755 UvrA DNA-binding domain BA_5396 PF04851 Type III restriction enzyme, res subunit BA_5396 PF17757 UvrB interaction domain BA_5396 PF02151 UvrB/uvrC motif BA_5396 PF12344 Ultra-violet resistance protein B BA_5396 PF00271 Helicase conserved C-terminal domain BA_5397 PF07282 Putative transposase DNA-binding domain BA_5397 PF01385 Probable transposase BA_5397 PF12323 Helix-turn-helix domain BA_5400 PF07739 TipAS antibiotic-recognition domain BA_5400 PF13411 MerR HTH family regulatory protein BA_5405 PF03601 Conserved hypothetical protein 698 BA_5406 PF03466 LysR substrate binding domain BA_5406 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_5407 PF13411 MerR HTH family regulatory protein BA_5408 PF03358 NADPH-dependent FMN reductase BA_5409 PF00005 ABC transporter BA_5409 PF12848 ABC transporter BA_5411 PF00005 ABC transporter BA_5411 PF00664 ABC transporter transmembrane region BA_5412 PF17820 PDZ domain BA_5414 PF03572 Peptidase family S41 BA_5414 PF01471 Putative peptidoglycan binding domain BA_5414 PF17820 PDZ domain BA_5415 PF18075 FtsX extracellular domain BA_5415 PF02687 FtsX-like permease family BA_5416 PF00005 ABC transporter BA_5417 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA_5421 PF07517 SecA DEAD-like domain BA_5421 PF01043 SecA preprotein cross-linking domain BA_5421 PF02810 SEC-C motif BA_5421 PF07516 SecA Wing and Scaffold domain BA_5422 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BA_5422 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BA_5424 PF00313 'Cold-shock' DNA-binding domain BA_5426 PF04851 Type III restriction enzyme, res subunit BA_5426 PF00271 Helicase conserved C-terminal domain BA_5427 PF00877 NlpC/P60 family BA_5427 PF01476 LysM domain BA_5428 PF01638 HxlR-like helix-turn-helix BA_5430 PF02645 Uncharacterised protein, DegV family COG1307 BA_5431 PF01205 Uncharacterized protein family UPF0029 BA_5431 PF09186 Domain of unknown function (DUF1949) BA_5432 PF03816 Cell envelope-related transcriptional attenuator domain BA_5433 PF02350 UDP-N-acetylglucosamine 2-epimerase BA_5434 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BA_5434 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BA_5434 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BA_5435 PF00953 Glycosyl transferase family 4 BA_5436 PF01522 Polysaccharide deacetylase BA_5437 PF03610 PTS system fructose IIA component BA_5437 PF00874 PRD domain BA_5437 PF00158 Sigma-54 interaction domain BA_5439 PF02417 Chromate transporter BA_5440 PF04794 YdjC-like protein BA_5441 PF11975 Family 4 glycosyl hydrolase C-terminal domain BA_5441 PF02056 Family 4 glycosyl hydrolase BA_5442 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BA_5443 PF02378 Phosphotransferase system, EIIC BA_5444 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA_5446 PF02675 S-adenosylmethionine decarboxylase BA_5447 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BA_5448 PF02378 Phosphotransferase system, EIIC BA_5449 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA_5450 PF00375 Sodium:dicarboxylate symporter family BA_5452 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA_5454 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA_5454 PF03466 LysR substrate binding domain BA_5460 PF01654 Cytochrome bd terminal oxidase subunit I BA_5461 PF02322 Cytochrome bd terminal oxidase subunit II BA_5462 PF02040 Arsenical pump membrane protein BA_5463 PF13667 ThiC-associated domain BA_5463 PF01964 Radical SAM ThiC family BA_5464 PF02652 L-lactate permease BA_5467 PF09988 Uncharacterized metal-binding protein (DUF2227) BA_5470 PF00884 Sulfatase BA_5472 PF01063 Amino-transferase class IV BA_5475 PF07662 Na+ dependent nucleoside transporter C-terminus BA_5475 PF01773 Na+ dependent nucleoside transporter N-terminus BA_5479 PF02028 BCCT, betaine/carnitine/choline family transporter BA_5481 PF06725 3D domain BA_5481 PF01476 LysM domain BA_5486 PF04434 SWIM zinc finger BA_5487 PF12419 SNF2 Helicase protein BA_5487 PF00271 Helicase conserved C-terminal domain BA_5487 PF00176 SNF2 family N-terminal domain BA_5493 PF04542 Sigma-70 region 2 BA_5493 PF04545 Sigma-70, region 4 BA_5494 PF04893 Yip1 domain BA_5495 PF12704 MacB-like periplasmic core domain BA_5495 PF02687 FtsX-like permease family BA_5496 PF00005 ABC transporter BA_5500 PF07690 Major Facilitator Superfamily BA_5503 PF16736 Single Cache-like BA_5503 PF00512 His Kinase A (phospho-acceptor) domain BA_5503 PF00989 PAS fold BA_5503 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_5504 PF00072 Response regulator receiver domain BA_5504 PF00486 Transcriptional regulatory protein, C terminal BA_5505 PF16363 GDP-mannose 4,6 dehydratase BA_5506 PF03816 Cell envelope-related transcriptional attenuator domain BA_5508 PF07977 FabA-like domain BA_5509 PF02350 UDP-N-acetylglucosamine 2-epimerase BA_5510 PF00005 ABC transporter BA_5510 PF08239 Bacterial SH3 domain BA_5511 PF01061 ABC-2 type transporter BA_5512 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BA_5512 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BA_5512 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BA_5521 PF12116 Stage III sporulation protein D BA_5524 PF01551 Peptidase family M23 BA_5526 PF00005 ABC transporter BA_5528 PF08486 Stage II sporulation protein BA_5529 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA_5531 PF06612 Protein of unknown function (DUF1146) BA_5532 PF00361 Proton-conducting membrane transporter BA_5533 PF00361 Proton-conducting membrane transporter BA_5534 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BA_5534 PF00361 Proton-conducting membrane transporter BA_5534 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BA_5535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BA_5536 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BA_5538 PF00146 NADH dehydrogenase BA_5539 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BA_5540 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BA_5541 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BA_5542 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BA_5543 PF03707 Bacterial signalling protein N terminal repeat BA_5543 PF00990 Diguanylate cyclase, GGDEF domain BA_5543 PF00563 EAL domain BA_5546 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BA_5546 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BA_5547 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA_5547 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA_5548 PF00231 ATP synthase BA_5549 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA_5549 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA_5549 PF00306 ATP synthase alpha/beta chain, C terminal domain BA_5550 PF00213 ATP synthase delta (OSCP) subunit BA_5551 PF00430 ATP synthase B/B' CF(0) BA_5552 PF00137 ATP synthase subunit C BA_5553 PF00119 ATP synthase A chain BA_5554 PF03899 ATP synthase I chain BA_5558 PF00464 Serine hydroxymethyltransferase BA_5559 PF04260 Protein of unknown function (DUF436) BA_5560 PF02502 Ribose/Galactose Isomerase BA_5561 PF01451 Low molecular weight phosphotyrosine protein phosphatase BA_5563 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA_5564 PF07681 DoxX BA_5565 PF01613 Flavin reductase like domain BA_5567 PF02659 Putative manganese efflux pump BA_5568 PF03481 Putative GTP-binding controlling metal-binding BA_5568 PF01300 Telomere recombination BA_5570 PF09551 Stage II sporulation protein R (spore_II_R) BA_5571 PF17827 PrmC N-terminal domain BA_5571 PF13847 Methyltransferase domain BA_5572 PF00472 RF-1 domain BA_5572 PF03462 PCRF domain BA_5573 PF00265 Thymidine kinase BA_5574 PF01197 Ribosomal protein L31 BA_5575 PF07497 Rho termination factor, RNA-binding domain BA_5575 PF07498 Rho termination factor, N-terminal domain BA_5575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA_5576 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BA_5578 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA_5580 PF01116 Fructose-bisphosphate aldolase class-II BA_5581 PF00072 Response regulator receiver domain BA_5582 PF10740 Domain of unknown function (DUF2529) BA_5583 PF00117 Glutamine amidotransferase class-I BA_5583 PF06418 CTP synthase N-terminus BA_5584 PF05066 HB1, ASXL, restriction endonuclease HTH domain BA_5586 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA_5586 PF02770 Acyl-CoA dehydrogenase, middle domain BA_5586 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA_5587 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA_5587 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA_5587 PF02770 Acyl-CoA dehydrogenase, middle domain BA_5588 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA_5588 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA_5589 PF00108 Thiolase, N-terminal domain BA_5589 PF02803 Thiolase, C-terminal domain BA_5590 PF02754 Cysteine-rich domain BA_5590 PF13183 4Fe-4S dicluster domain BA_5591 PF13091 PLD-like domain BA_5592 PF03851 UV-endonuclease UvdE BA_5593 PF00990 Diguanylate cyclase, GGDEF domain BA_5593 PF00563 EAL domain BA_5593 PF03707 Bacterial signalling protein N terminal repeat BA_5597 PF00072 Response regulator receiver domain BA_5597 PF00196 Bacterial regulatory proteins, luxR family BA_5598 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_5598 PF07730 Histidine kinase BA_5600 PF00005 ABC transporter BA_5601 PF00557 Metallopeptidase family M24 BA_5606 PF04389 Peptidase family M28 BA_5606 PF02225 PA domain BA_5610 PF04542 Sigma-70 region 2 BA_5610 PF08281 Sigma-70, region 4 BA_5611 PF05746 DALR anticodon binding domain BA_5611 PF03485 Arginyl tRNA synthetase N terminal domain BA_5611 PF00750 tRNA synthetases class I (R) BA_5612 PF09148 Domain of unknown function (DUF1934) BA_5613 PF17676 LD-carboxypeptidase C-terminal domain BA_5613 PF02016 LD-carboxypeptidase N-terminal domain BA_5617 PF00491 Arginase family BA_5619 PF17284 Spermidine synthase tetramerisation domain BA_5620 PF07690 Major Facilitator Superfamily BA_5621 PF13411 MerR HTH family regulatory protein BA_5622 PF03009 Glycerophosphoryl diester phosphodiesterase family BA_5623 PF00905 Penicillin binding protein transpeptidase domain BA_5623 PF00912 Transglycosylase BA_5624 PF08741 YwhD family BA_5625 PF02163 Peptidase family M50 BA_5626 PF01361 Tautomerase enzyme BA_5627 PF01966 HD domain BA_5628 PF01497 Periplasmic binding protein BA_5629 PF00005 ABC transporter BA_5630 PF01032 FecCD transport family BA_5632 PF07293 Protein of unknown function (DUF1450) BA_5635 PF03099 Biotin/lipoate A/B protein ligase family BA_5636 PF01515 Phosphate acetyl/butaryl transferase BA_5637 PF06778 Chlorite dismutase BA_5639 PF07943 Penicillin-binding protein 5, C-terminal domain BA_5639 PF00768 D-alanyl-D-alanine carboxypeptidase BA_5640 PF07486 Cell Wall Hydrolase BA_5641 PF09671 Spore coat protein (Spore_GerQ) BA_5642 PF04241 Protein of unknown function (DUF423) BA_5645 PF00860 Permease family BA_5647 PF12823 Domain of unknown function (DUF3817) BA_5648 PF03167 Uracil DNA glycosylase superfamily BA_5649 PF12679 ABC-2 family transporter protein BA_5650 PF00005 ABC transporter BA_5651 PF13472 GDSL-like Lipase/Acylhydrolase family BA_5652 PF00356 Bacterial regulatory proteins, lacI family BA_5652 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BA_5654 PF01842 ACT domain BA_5654 PF00742 Homoserine dehydrogenase BA_5654 PF03447 Homoserine dehydrogenase, NAD binding domain BA_5655 PF04204 Homoserine O-succinyltransferase BA_5656 PF01053 Cys/Met metabolism PLP-dependent enzyme BA_5658 PF13419 Haloacid dehalogenase-like hydrolase BA_5659 PF00027 Cyclic nucleotide-binding domain BA_5660 PF02525 Flavodoxin-like fold BA_5661 PF00196 Bacterial regulatory proteins, luxR family BA_5661 PF00072 Response regulator receiver domain BA_5663 PF08543 Phosphomethylpyrimidine kinase BA_5664 PF00990 Diguanylate cyclase, GGDEF domain BA_5664 PF07694 5TMR of 5TMR-LYT BA_5665 PF04328 Selenoprotein, putative BA_5666 PF13722 5TM C-terminal transporter carbon starvation CstA BA_5666 PF02554 Carbon starvation protein CstA BA_5667 PF04397 LytTr DNA-binding domain BA_5667 PF00072 Response regulator receiver domain BA_5668 PF07690 Major Facilitator Superfamily BA_5669 PF03808 Glycosyl transferase WecB/TagA/CpsF family BA_5672 PF03458 UPF0126 domain BA_5673 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA_5675 PF03061 Thioesterase superfamily BA_5677 PF00535 Glycosyl transferase family 2 BA_5678 PF12848 ABC transporter BA_5678 PF00005 ABC transporter BA_5684 PF00535 Glycosyl transferase family 2 BA_5685 PF00440 Bacterial regulatory proteins, tetR family BA_5686 PF00873 AcrB/AcrD/AcrF family BA_5687 PF01625 Peptide methionine sulfoxide reductase BA_5687 PF01641 SelR domain BA_5688 PF01594 AI-2E family transporter BA_5689 PF04172 LrgB-like family BA_5690 PF03788 LrgA family BA_5691 PF00072 Response regulator receiver domain BA_5691 PF04397 LytTr DNA-binding domain BA_5692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_5692 PF13492 GAF domain BA_5692 PF07694 5TMR of 5TMR-LYT BA_5692 PF06580 Histidine kinase BA_5693 PF07690 Major Facilitator Superfamily BA_5694 PF02028 BCCT, betaine/carnitine/choline family transporter BA_5695 PF02898 Nitric oxide synthase, oxygenase domain BA_5696 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BA_5696 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BA_5698 PF02293 AmiS/UreI family transporter BA_5700 PF16363 GDP-mannose 4,6 dehydratase BA_5701 PF03006 Haemolysin-III related BA_5703 PF03880 DbpA RNA binding domain BA_5703 PF00270 DEAD/DEAH box helicase BA_5703 PF00271 Helicase conserved C-terminal domain BA_5705 PF00478 IMP dehydrogenase / GMP reductase domain BA_5706 PF08439 Oligopeptidase F BA_5706 PF01432 Peptidase family M3 BA_5708 PF02590 Predicted SPOUT methyltransferase BA_5710 PF13180 PDZ domain BA_5711 PF00753 Metallo-beta-lactamase superfamily BA_5712 PF09648 YycH protein BA_5713 PF07435 YycH protein BA_5714 PF13426 PAS domain BA_5714 PF00512 His Kinase A (phospho-acceptor) domain BA_5714 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA_5714 PF00672 HAMP domain BA_5715 PF00072 Response regulator receiver domain BA_5715 PF00486 Transcriptional regulatory protein, C terminal BA_5716 PF00709 Adenylosuccinate synthetase BA_5717 PF00772 DnaB-like helicase N terminal domain BA_5717 PF03796 DnaB-like helicase C terminal domain BA_5718 PF01281 Ribosomal protein L9, N-terminal domain BA_5718 PF03948 Ribosomal protein L9, C-terminal domain BA_5719 PF01368 DHH family BA_5719 PF02272 DHHA1 domain BA_5720 PF09991 Predicted membrane protein (DUF2232) BA_5721 PF01084 Ribosomal protein S18 BA_5722 PF00436 Single-strand binding protein family BA_5723 PF01250 Ribosomal protein S6 BA_5724 PF01926 50S ribosome-binding GTPase BA_5724 PF06071 Protein of unknown function (DUF933) BA_5725 PF06107 Bacterial protein of unknown function (DUF951) BA_5726 PF00924 Mechanosensitive ion channel BA_5728 PF06866 Protein of unknown function (DUF1256) BA_5729 PF02195 ParB-like nuclease domain BA_5729 PF17762 HTH domain found in ParB protein BA_5730 PF13614 AAA domain BA_5731 PF17762 HTH domain found in ParB protein BA_5731 PF02195 ParB-like nuclease domain BA_5732 PF02527 rRNA small subunit methyltransferase G BA_5733 PF01134 Glucose inhibited division protein A BA_5733 PF13932 GidA associated domain BA_5734 PF10396 GTP-binding protein TrmE N-terminus BA_5734 PF12631 MnmE helical domain BA_5734 PF01926 50S ribosome-binding GTPase BA_5735 PF14804 Jag N-terminus BA_5735 PF01424 R3H domain BA_5736 PF02096 60Kd inner membrane protein BA_5737 PF00825 Ribonuclease P BA_5738 PF00468 Ribosomal protein L34 BA_5858 PF05697 Bacterial trigger factor protein (TF) BA_5858 PF05698 Bacterial trigger factor protein (TF) C-terminus BA_5872 PF01502 Phosphoribosyl-AMP cyclohydrolase