BA_0001 SM00382 ATPases associated with a variety of cellular activities BA_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain BA_0002 SM00480 DNA polymerase III beta subunit BA_0005 SM00387 Histidine kinase-like ATPases BA_0005 SM00433 TopoisomeraseII BA_0006 SM00434 DNA Topoisomerase IV BA_0008 SM00116 Domain in cystathionine beta-synthase and other proteins. BA_0008 SM01240 BA_0008 BA_0009 SM00936 Penicillin-binding protein 5, C-terminal domain BA_0019 SM00382 ATPases associated with a variety of cellular activities BA_0021 SM00493 BA_0021 BA_0034 SM00966 SpoVT / AbrB like domain BA_0038 SM00493 BA_0038 BA_0039 SM00650 Ribosomal RNA adenine dimethylases BA_0049 SM01400 BA_0049 BA_0052 SM00487 DEAD-like helicases superfamily BA_0052 SM00490 helicase superfamily c-terminal domain BA_0052 SM00982 BA_0052 BA_0052 SM01058 CarD-like/TRCF domain BA_0053 SM00966 SpoVT / AbrB like domain BA_0056 SM00363 S4 RNA-binding domain BA_0060 SM00316 Ribosomal protein S1-like RNA-binding domain BA_0061 SM00331 Sigma factor PP2C-like phosphatases BA_0061 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BA_0062 SM00977 TilS substrate C-terminal domain BA_0064 SM00382 ATPases associated with a variety of cellular activities BA_0072 SM00905 Dihydroneopterin aldolase BA_0074 SM00530 Helix-turn-helix XRE-family like proteins BA_0080 SM00382 ATPases associated with a variety of cellular activities BA_0080 SM01086 C-terminal, D2-small domain, of ClpB protein BA_0081 SM00382 ATPases associated with a variety of cellular activities BA_0083 SM00670 Large family of predicted nucleotide-binding domains BA_0089 SM00840 BA_0089 BA_0090 SM00535 Ribonuclease III family BA_0091 SM00967 RNA 2'-O ribose methyltransferase substrate binding BA_0093 SM00421 helix_turn_helix, Lux Regulon BA_0096 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BA_0097 SM00649 Ribosomal protein L11/L12 BA_0103 SM00663 RNA polymerase I subunit A N-terminus BA_0107 SM00838 Elongation factor G C-terminus BA_0107 SM00889 Elongation factor G, domain IV BA_0109 SM01403 BA_0109 BA_0113 SM01382 BA_0113 BA_0113 SM01383 BA_0113 BA_0116 SM00322 K homology RNA-binding domain BA_0120 SM01374 BA_0120 BA_0121 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BA_0133 SM00316 Ribosomal protein S1-like RNA-binding domain BA_0137 SM00662 RNA polymerases D BA_0139 SM00382 ATPases associated with a variety of cellular activities BA_0140 SM00382 ATPases associated with a variety of cellular activities BA_0146 SM00646 BA_0146 BA_0149 SM01251 BA_0149 BA_0161 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_0161 SM00895 BA_0161 BA_0164 SM01350 BA_0164 BA_0174 SM00382 ATPases associated with a variety of cellular activities BA_0174 SM00930 BA_0174 BA_0176 SM00829 Enoylreductase BA_0187 SM00382 ATPases associated with a variety of cellular activities BA_0188 SM00382 ATPases associated with a variety of cellular activities BA_0191 SM00342 helix_turn_helix, arabinose operon control protein BA_0213 SM00563 Phosphate acyltransferases BA_0216 SM00354 helix_turn _helix lactose operon repressor BA_0228 SM00382 ATPases associated with a variety of cellular activities BA_0234 SM00382 ATPases associated with a variety of cellular activities BA_0235 SM00382 ATPases associated with a variety of cellular activities BA_0247 SM00487 DEAD-like helicases superfamily BA_0247 SM00490 helicase superfamily c-terminal domain BA_0252 SM01005 Alanine racemase, C-terminal domain BA_0255 SM00316 Ribosomal protein S1-like RNA-binding domain BA_0255 SM00732 Likely ribonuclease with RNase H fold. BA_0257 SM00731 SprT homologues. BA_0262 SM00382 ATPases associated with a variety of cellular activities BA_0263 SM00881 CoA binding domain BA_0266 SM00883 Chaperonin 10 Kd subunit BA_0271 SM00448 cheY-homologous receiver domain BA_0271 SM00862 Transcriptional regulatory protein, C terminal BA_0272 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_0272 SM00387 Histidine kinase-like ATPases BA_0272 SM00388 His Kinase A (phosphoacceptor) domain BA_0285 SM00382 ATPases associated with a variety of cellular activities BA_0286 SM00387 Histidine kinase-like ATPases BA_0286 SM00388 His Kinase A (phosphoacceptor) domain BA_0287 SM00448 cheY-homologous receiver domain BA_0287 SM00862 Transcriptional regulatory protein, C terminal BA_0288 SM01001 AIR carboxylase BA_0290 SM00998 Adenylosuccinate lyase C-terminus BA_0293 SM01211 BA_0293 BA_0298 SM00798 AICARFT/IMPCHase bienzyme BA_0298 SM00851 MGS-like domain BA_0299 SM01209 BA_0299 BA_0299 SM01210 BA_0299 BA_0301 SM00244 prohibitin homologues BA_0306 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BA_0306 SM00292 breast cancer carboxy-terminal domain BA_0306 SM00532 Ligase N family BA_0312 SM00382 ATPases associated with a variety of cellular activities BA_0312 SM00930 BA_0312 BA_0318 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_0322 SM00845 GatB domain BA_0323 SM00046 Diacylglycerol kinase catalytic domain (presumed) BA_0326 SM00382 ATPases associated with a variety of cellular activities BA_0339 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BA_0348 SM01007 Class II Aldolase and Adducin N-terminal domain BA_0368 SM00382 ATPases associated with a variety of cellular activities BA_0369 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_0369 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_0370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_0370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_0371 SM00642 Alpha-amylase domain BA_0375 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BA_0375 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BA_0375 SM00493 BA_0375 BA_0379 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_0379 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_0383 SM00382 ATPases associated with a variety of cellular activities BA_0384 SM00382 ATPases associated with a variety of cellular activities BA_0385 SM00060 Fibronectin type 3 domain BA_0385 SM00636 BA_0385 BA_0385 SM00637 BA_0385 BA_0391 SM00530 Helix-turn-helix XRE-family like proteins BA_0396 SM00946 Prolyl-tRNA synthetase, C-terminal BA_0405 SM00831 Cation transporter/ATPase, N-terminus BA_0407 SM00226 Low molecular weight phosphatase family BA_0428 SM00530 Helix-turn-helix XRE-family like proteins BA_0432 SM00530 Helix-turn-helix XRE-family like proteins BA_0433 SM00530 Helix-turn-helix XRE-family like proteins BA_0439 SM00382 ATPases associated with a variety of cellular activities BA_0489 SM00382 ATPases associated with a variety of cellular activities BA_0494 SM00530 Helix-turn-helix XRE-family like proteins BA_0522 SM00478 endonuclease III BA_0522 SM00525 BA_0522 BA_0528 SM00382 ATPases associated with a variety of cellular activities BA_0532 SM00382 ATPases associated with a variety of cellular activities BA_0545 SM00567 E-Z type HEAT repeats BA_0548 SM00052 Putative diguanylate phosphodiesterase BA_0548 SM00091 PAS domain BA_0548 SM00267 diguanylate cyclase BA_0550 SM00763 PrkA AAA domain BA_0552 SM00364 Leucine-rich repeats, bacterial type BA_0552 SM00365 Leucine-rich repeat, SDS22-like subfamily BA_0552 SM00369 Leucine-rich repeats, typical (most populated) subfamily BA_0552 SM00725 NEAr Transporter domain BA_0555 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA_0557 SM00244 prohibitin homologues BA_0558 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_0558 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_0559 SM00091 PAS domain BA_0559 SM00387 Histidine kinase-like ATPases BA_0564 SM00248 ankyrin repeats BA_0566 SM00382 ATPases associated with a variety of cellular activities BA_0571 SM00448 cheY-homologous receiver domain BA_0571 SM00862 Transcriptional regulatory protein, C terminal BA_0572 SM00387 Histidine kinase-like ATPases BA_0572 SM00388 His Kinase A (phosphoacceptor) domain BA_0575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_0575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_0576 SM00387 Histidine kinase-like ATPases BA_0577 SM00448 cheY-homologous receiver domain BA_0579 SM00919 Malic enzyme, NAD binding domain BA_0579 SM01274 BA_0579 BA_0582 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_0584 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_0584 SM00387 Histidine kinase-like ATPases BA_0584 SM00388 His Kinase A (phosphoacceptor) domain BA_0585 SM00448 cheY-homologous receiver domain BA_0585 SM00862 Transcriptional regulatory protein, C terminal BA_0589 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BA_0589 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BA_0592 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BA_0592 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BA_0594 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_0597 SM00028 Tetratricopeptide repeats BA_0597 SM00530 Helix-turn-helix XRE-family like proteins BA_0612 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_0618 SM00382 ATPases associated with a variety of cellular activities BA_0623 SM00327 von Willebrand factor (vWF) type A domain BA_0624 SM00382 ATPases associated with a variety of cellular activities BA_0625 SM00155 Phospholipase D. Active site motifs. BA_0628 SM00052 Putative diguanylate phosphodiesterase BA_0628 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BA_0628 SM00091 PAS domain BA_0628 SM00267 diguanylate cyclase BA_0630 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_0630 SM00866 BA_0630 BA_0632 SM00642 Alpha-amylase domain BA_0639 SM00382 ATPases associated with a variety of cellular activities BA_0640 SM00062 Bacterial periplasmic substrate-binding proteins BA_0640 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BA_0650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_0650 SM00387 Histidine kinase-like ATPases BA_0650 SM00388 His Kinase A (phosphoacceptor) domain BA_0651 SM00448 cheY-homologous receiver domain BA_0651 SM00862 Transcriptional regulatory protein, C terminal BA_0659 SM00382 ATPases associated with a variety of cellular activities BA_0662 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_0664 SM00354 helix_turn _helix lactose operon repressor BA_0667 SM00382 ATPases associated with a variety of cellular activities BA_0675 SM00829 Enoylreductase BA_0677 SM00770 Zinc dependent phospholipase C (alpha toxin) BA_0684 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_0686 SM00530 Helix-turn-helix XRE-family like proteins BA_0695 SM00530 Helix-turn-helix XRE-family like proteins BA_0714 SM00899 BA_0714 BA_0720 SM00116 Domain in cystathionine beta-synthase and other proteins. BA_0724 SM00287 Bacterial SH3 domain homologues BA_0726 SM00382 ATPases associated with a variety of cellular activities BA_0744 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_0753 SM00640 Glycosyl hydrolases family 32 BA_0755 SM00354 helix_turn _helix lactose operon repressor BA_0770 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_0774 SM00450 Rhodanese Homology Domain BA_0776 SM00450 Rhodanese Homology Domain BA_0777 SM00450 Rhodanese Homology Domain BA_0777 SM00849 Metallo-beta-lactamase superfamily BA_0779 SM00450 Rhodanese Homology Domain BA_0784 SM00829 Enoylreductase BA_0796 SM00287 Bacterial SH3 domain homologues BA_0798 SM00382 ATPases associated with a variety of cellular activities BA_0808 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BA_0830 SM00344 helix_turn_helix ASNC type BA_0843 SM01060 BA_0843 BA_0852 SM00382 ATPases associated with a variety of cellular activities BA_0855 SM00062 Bacterial periplasmic substrate-binding proteins BA_0855 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BA_0857 SM00382 ATPases associated with a variety of cellular activities BA_0872 SM00644 BA_0872 BA_0875 SM00729 Elongator protein 3, MiaB family, Radical SAM BA_0882 SM00957 SecA DEAD-like domain BA_0882 SM00958 SecA preprotein cross-linking domain BA_0885 SM00635 Bacterial Ig-like domain 2 BA_0898 SM00646 BA_0898 BA_0912 SM00382 ATPases associated with a variety of cellular activities BA_0918 SM00860 SMI1 / KNR4 family BA_0919 SM00860 SMI1 / KNR4 family BA_0923 SM00091 PAS domain BA_0923 SM00387 Histidine kinase-like ATPases BA_0924 SM00448 cheY-homologous receiver domain BA_0931 SM00422 helix_turn_helix, mercury resistance BA_0958 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_0965 SM01120 BA_0965 BA_0975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA_0981 SM00460 Transglutaminase/protease-like homologues BA_0994 SM00331 Sigma factor PP2C-like phosphatases BA_0994 SM00448 cheY-homologous receiver domain BA_0995 SM00138 Methyltransferase, chemotaxis proteins BA_0996 SM00387 Histidine kinase-like ATPases BA_0996 SM00388 His Kinase A (phosphoacceptor) domain BA_0996 SM00448 cheY-homologous receiver domain BA_1004 SM00829 Enoylreductase BA_1012 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA_1017 SM00028 Tetratricopeptide repeats BA_1022 SM00530 Helix-turn-helix XRE-family like proteins BA_1035 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_1045 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_1048 SM00382 ATPases associated with a variety of cellular activities BA_1063 SM00422 helix_turn_helix, mercury resistance BA_1086 SM00354 helix_turn _helix lactose operon repressor BA_1088 SM00849 Metallo-beta-lactamase superfamily BA_1093 SM00725 NEAr Transporter domain BA_1111 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA_1114 SM00342 helix_turn_helix, arabinose operon control protein BA_1114 SM00871 Bacterial transcription activator, effector binding domain BA_1118 SM00387 Histidine kinase-like ATPases BA_1118 SM00388 His Kinase A (phosphoacceptor) domain BA_1119 SM00448 cheY-homologous receiver domain BA_1119 SM00862 Transcriptional regulatory protein, C terminal BA_1125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_1125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_1135 SM00357 Cold shock protein domain BA_1159 SM01060 BA_1159 BA_1162 SM00642 Alpha-amylase domain BA_1163 SM00530 Helix-turn-helix XRE-family like proteins BA_1167 SM00316 Ribosomal protein S1-like RNA-binding domain BA_1177 SM00382 ATPases associated with a variety of cellular activities BA_1177 SM01086 C-terminal, D2-small domain, of ClpB protein BA_1185 SM00825 Beta-ketoacyl synthase BA_1194 SM00382 ATPases associated with a variety of cellular activities BA_1195 SM00382 ATPases associated with a variety of cellular activities BA_1204 SM00155 Phospholipase D. Active site motifs. BA_1210 SM01118 BA_1210 BA_1212 SM00954 Region found in RelA / SpoT proteins BA_1245 SM00635 Bacterial Ig-like domain 2 BA_1270 SM00861 Transketolase, pyrimidine binding domain BA_1271 SM00530 Helix-turn-helix XRE-family like proteins BA_1292 SM00530 Helix-turn-helix XRE-family like proteins BA_1297 SM00382 ATPases associated with a variety of cellular activities BA_1301 SM00014 Acid phosphatase homologues BA_1312 SM00448 cheY-homologous receiver domain BA_1312 SM00862 Transcriptional regulatory protein, C terminal BA_1313 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_1313 SM00387 Histidine kinase-like ATPases BA_1313 SM00388 His Kinase A (phosphoacceptor) domain BA_1314 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_1314 SM00895 BA_1314 BA_1330 SM00822 BA_1330 BA_1343 SM00420 helix_turn_helix, Deoxyribose operon repressor BA_1343 SM01134 BA_1343 BA_1346 SM00365 Leucine-rich repeat, SDS22-like subfamily BA_1346 SM00369 Leucine-rich repeats, typical (most populated) subfamily BA_1351 SM00387 Histidine kinase-like ATPases BA_1351 SM00388 His Kinase A (phosphoacceptor) domain BA_1352 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_1356 SM00387 Histidine kinase-like ATPases BA_1356 SM00388 His Kinase A (phosphoacceptor) domain BA_1370 SM00465 GIY-YIG type nucleases (URI domain) BA_1370 SM00496 Intron-encoded nuclease repeat 2 BA_1373 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_1374 SM00382 ATPases associated with a variety of cellular activities BA_1376 SM00382 ATPases associated with a variety of cellular activities BA_1380 SM00344 helix_turn_helix ASNC type BA_1406 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_1420 SM00917 LeuA allosteric (dimerisation) domain BA_1421 SM01329 BA_1421 BA_1456 SM00387 Histidine kinase-like ATPases BA_1457 SM00421 helix_turn_helix, Lux Regulon BA_1457 SM00448 cheY-homologous receiver domain BA_1482 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_1482 SM00387 Histidine kinase-like ATPases BA_1482 SM00388 His Kinase A (phosphoacceptor) domain BA_1493 SM00363 S4 RNA-binding domain BA_1497 SM00448 cheY-homologous receiver domain BA_1497 SM00862 Transcriptional regulatory protein, C terminal BA_1498 SM00091 PAS domain BA_1498 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_1498 SM00387 Histidine kinase-like ATPases BA_1498 SM00388 His Kinase A (phosphoacceptor) domain BA_1500 SM00257 Lysin motif BA_1505 SM00487 DEAD-like helicases superfamily BA_1505 SM00490 helicase superfamily c-terminal domain BA_1507 SM00257 Lysin motif BA_1509 SM00422 helix_turn_helix, mercury resistance BA_1511 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BA_1514 SM00644 BA_1514 BA_1516 SM00870 BA_1516 BA_1519 SM00316 Ribosomal protein S1-like RNA-binding domain BA_1520 SM01240 BA_1520 BA_1531 SM00411 bacterial (prokaryotic) histone like domain BA_1536 SM00562 BA_1536 BA_1541 SM00028 Tetratricopeptide repeats BA_1542 SM00914 BA_1542 BA_1552 SM00986 Uracil DNA glycosylase superfamily BA_1552 SM00987 UreE urease accessory protein, C-terminal domain BA_1556 SM00851 MGS-like domain BA_1565 SM00479 BA_1565 BA_1565 SM00487 DEAD-like helicases superfamily BA_1565 SM00491 BA_1565 BA_1570 SM00478 endonuclease III BA_1570 SM00525 BA_1570 BA_1572 SM00060 Fibronectin type 3 domain BA_1584 SM00981 BA_1584 BA_1586 SM00491 BA_1586 BA_1599 SM00450 Rhodanese Homology Domain BA_1606 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BA_1606 SM00475 5'-3' exonuclease BA_1629 SM00357 Cold shock protein domain BA_1640 SM00849 Metallo-beta-lactamase superfamily BA_1641 SM00422 helix_turn_helix, mercury resistance BA_1641 SM00871 Bacterial transcription activator, effector binding domain BA_1660 SM00448 cheY-homologous receiver domain BA_1665 SM00138 Methyltransferase, chemotaxis proteins BA_1681 SM00382 ATPases associated with a variety of cellular activities BA_1698 SM00028 Tetratricopeptide repeats BA_1720 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BA_1730 SM00530 Helix-turn-helix XRE-family like proteins BA_1734 SM00382 ATPases associated with a variety of cellular activities BA_1737 SM00849 Metallo-beta-lactamase superfamily BA_1737 SM01027 Beta-Casp domain BA_1742 SM00835 Cupin BA_1745 SM00855 Phosphoglycerate mutase family BA_1758 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_1758 SM00895 BA_1758 BA_1760 SM00833 Cobalamin synthesis protein cobW C-terminal domain BA_1781 SM00530 Helix-turn-helix XRE-family like proteins BA_1791 SM00421 helix_turn_helix, Lux Regulon BA_1791 SM00448 cheY-homologous receiver domain BA_1793 SM00382 ATPases associated with a variety of cellular activities BA_1796 SM00155 Phospholipase D. Active site motifs. BA_1801 SM00919 Malic enzyme, NAD binding domain BA_1801 SM01274 BA_1801 BA_1802 SM00387 Histidine kinase-like ATPases BA_1803 SM00448 cheY-homologous receiver domain BA_1804 SM00487 DEAD-like helicases superfamily BA_1804 SM00490 helicase superfamily c-terminal domain BA_1817 SM00646 BA_1817 BA_1818 SM00047 Lysozyme subfamily 2 BA_1855 SM00854 Bacterial capsule synthesis protein PGA_cap BA_1861 SM00850 LytTr DNA-binding domain BA_1875 SM00729 Elongator protein 3, MiaB family, Radical SAM BA_1877 SM00448 cheY-homologous receiver domain BA_1877 SM00862 Transcriptional regulatory protein, C terminal BA_1881 SM00450 Rhodanese Homology Domain BA_1892 SM01133 BA_1892 BA_1894 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BA_1901 SM01011 Aminopeptidase P, N-terminal domain BA_1903 SM00287 Bacterial SH3 domain homologues BA_1905 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BA_1905 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BA_1905 SM00493 BA_1905 BA_1925 SM00833 Cobalamin synthesis protein cobW C-terminal domain BA_1933 SM00382 ATPases associated with a variety of cellular activities BA_1934 SM00382 ATPases associated with a variety of cellular activities BA_1941 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_1945 SM00382 ATPases associated with a variety of cellular activities BA_1946 SM00382 ATPases associated with a variety of cellular activities BA_1952 SM00287 Bacterial SH3 domain homologues BA_1955 SM00448 cheY-homologous receiver domain BA_1955 SM00862 Transcriptional regulatory protein, C terminal BA_1956 SM00387 Histidine kinase-like ATPases BA_1956 SM00388 His Kinase A (phosphoacceptor) domain BA_1975 SM00448 cheY-homologous receiver domain BA_1975 SM00862 Transcriptional regulatory protein, C terminal BA_1976 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_1976 SM00387 Histidine kinase-like ATPases BA_1976 SM00388 His Kinase A (phosphoacceptor) domain BA_1995 SM00460 Transglutaminase/protease-like homologues BA_2000 SM00966 SpoVT / AbrB like domain BA_2002 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_2009 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_2009 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_2021 SM00833 Cobalamin synthesis protein cobW C-terminal domain BA_2044 SM00855 Phosphoglycerate mutase family BA_2054 SM00155 Phospholipase D. Active site motifs. BA_2059 SM01091 Transporter associated domain BA_2075 SM00244 prohibitin homologues BA_2076 SM00855 Phosphoglycerate mutase family BA_2079 SM01005 Alanine racemase, C-terminal domain BA_2085 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_2109 SM00487 DEAD-like helicases superfamily BA_2109 SM00490 helicase superfamily c-terminal domain BA_2113 SM00829 Enoylreductase BA_2117 SM00849 Metallo-beta-lactamase superfamily BA_2120 SM00460 Transglutaminase/protease-like homologues BA_2125 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BA_2129 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_2130 SM00382 ATPases associated with a variety of cellular activities BA_2132 SM00100 Cyclic nucleotide-monophosphate binding domain BA_2132 SM00419 helix_turn_helix, cAMP Regulatory protein BA_2133 SM00729 Elongator protein 3, MiaB family, Radical SAM BA_2135 SM00852 Probable molybdopterin binding domain BA_2149 SM00894 Excalibur calcium-binding domain BA_2163 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA_2164 SM00382 ATPases associated with a variety of cellular activities BA_2171 SM00567 E-Z type HEAT repeats BA_2171 SM00932 Scaffold protein Nfu/NifU N terminal BA_2175 SM00836 DALR anticodon binding domain BA_2175 SM01016 Arginyl tRNA synthetase N terminal dom BA_2179 SM00028 Tetratricopeptide repeats BA_2180 SM00028 Tetratricopeptide repeats BA_2187 SM00327 von Willebrand factor (vWF) type A domain BA_2190 SM00382 ATPases associated with a variety of cellular activities BA_2193 SM00028 Tetratricopeptide repeats BA_2201 SM00857 Resolvase, N terminal domain BA_2212 SM00448 cheY-homologous receiver domain BA_2212 SM00862 Transcriptional regulatory protein, C terminal BA_2213 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_2213 SM00387 Histidine kinase-like ATPases BA_2213 SM00388 His Kinase A (phosphoacceptor) domain BA_2228 SM00382 ATPases associated with a variety of cellular activities BA_2240 SM00563 Phosphate acyltransferases BA_2264 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA_2265 SM00421 helix_turn_helix, Lux Regulon BA_2265 SM00448 cheY-homologous receiver domain BA_2267 SM00829 Enoylreductase BA_2279 SM00382 ATPases associated with a variety of cellular activities BA_2288 SM01091 Transporter associated domain BA_2291 SM00387 Histidine kinase-like ATPases BA_2291 SM00388 His Kinase A (phosphoacceptor) domain BA_2295 SM00882 Coenzyme A transferase BA_2296 SM00882 Coenzyme A transferase BA_2299 SM00382 ATPases associated with a variety of cellular activities BA_2307 SM00219 Tyrosine kinase, catalytic domain BA_2309 SM00014 Acid phosphatase homologues BA_2313 SM00860 SMI1 / KNR4 family BA_2318 SM00530 Helix-turn-helix XRE-family like proteins BA_2332 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BA_2363 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_2372 SM00823 Phosphopantetheine attachment site BA_2372 SM00824 Thioesterase BA_2373 SM00923 MbtH-like protein BA_2377 SM00411 bacterial (prokaryotic) histone like domain BA_2386 SM00363 S4 RNA-binding domain BA_2388 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BA_2399 SM00849 Metallo-beta-lactamase superfamily BA_2405 SM00849 Metallo-beta-lactamase superfamily BA_2409 SM01059 Chloramphenicol acetyltransferase BA_2414 SM00530 Helix-turn-helix XRE-family like proteins BA_2422 SM00357 Cold shock protein domain BA_2436 SM00859 Semialdehyde dehydrogenase, NAD binding domain BA_2443 SM00382 ATPases associated with a variety of cellular activities BA_2444 SM00382 ATPases associated with a variety of cellular activities BA_2446 SM00646 BA_2446 BA_2448 SM00530 Helix-turn-helix XRE-family like proteins BA_2467 SM01207 BA_2467 BA_2472 SM00849 Metallo-beta-lactamase superfamily BA_2475 SM00487 DEAD-like helicases superfamily BA_2475 SM00490 helicase superfamily c-terminal domain BA_2482 SM00382 ATPases associated with a variety of cellular activities BA_2487 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_2488 SM00855 Phosphoglycerate mutase family BA_2508 SM00014 Acid phosphatase homologues BA_2509 SM00354 helix_turn _helix lactose operon repressor BA_2523 SM00530 Helix-turn-helix XRE-family like proteins BA_2528 SM00646 BA_2528 BA_2531 SM00382 ATPases associated with a variety of cellular activities BA_2533 SM00052 Putative diguanylate phosphodiesterase BA_2533 SM00091 PAS domain BA_2533 SM00267 diguanylate cyclase BA_2536 SM00860 SMI1 / KNR4 family BA_2538 SM00450 Rhodanese Homology Domain BA_2538 SM00849 Metallo-beta-lactamase superfamily BA_2541 SM00382 ATPases associated with a variety of cellular activities BA_2548 SM00878 Biotin carboxylase C-terminal domain BA_2560 SM00387 Histidine kinase-like ATPases BA_2560 SM00388 His Kinase A (phosphoacceptor) domain BA_2561 SM00448 cheY-homologous receiver domain BA_2561 SM00862 Transcriptional regulatory protein, C terminal BA_2572 SM00382 ATPases associated with a variety of cellular activities BA_2576 SM00422 helix_turn_helix, mercury resistance BA_2576 SM00871 Bacterial transcription activator, effector binding domain BA_2582 SM00342 helix_turn_helix, arabinose operon control protein BA_2585 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_2597 SM00448 cheY-homologous receiver domain BA_2597 SM00862 Transcriptional regulatory protein, C terminal BA_2603 SM00382 ATPases associated with a variety of cellular activities BA_2609 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_2610 SM01209 BA_2610 BA_2636 SM00091 PAS domain BA_2636 SM00387 Histidine kinase-like ATPases BA_2636 SM00388 His Kinase A (phosphoacceptor) domain BA_2641 SM00382 ATPases associated with a variety of cellular activities BA_2644 SM00387 Histidine kinase-like ATPases BA_2644 SM00388 His Kinase A (phosphoacceptor) domain BA_2647 SM00829 Enoylreductase BA_2648 SM00740 BA_2648 BA_2663 SM00422 helix_turn_helix, mercury resistance BA_2684 SM00480 DNA polymerase III beta subunit BA_2705 SM00465 GIY-YIG type nucleases (URI domain) BA_2728 SM00642 Alpha-amylase domain BA_2733 SM00871 Bacterial transcription activator, effector binding domain BA_2737 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_2761 SM00382 ATPases associated with a variety of cellular activities BA_2765 SM00420 helix_turn_helix, Deoxyribose operon repressor BA_2765 SM01134 BA_2765 BA_2775 SM00861 Transketolase, pyrimidine binding domain BA_2786 SM00116 Domain in cystathionine beta-synthase and other proteins. BA_2786 SM00382 ATPases associated with a variety of cellular activities BA_2793 SM00060 Fibronectin type 3 domain BA_2793 SM00495 Chitin-binding domain type 3 BA_2803 SM00849 Metallo-beta-lactamase superfamily BA_2818 SM00341 Helicase and RNase D C-terminal BA_2818 SM00487 DEAD-like helicases superfamily BA_2818 SM00490 helicase superfamily c-terminal domain BA_2818 SM00956 BA_2818 BA_2826 SM01131 BA_2826 BA_2832 SM01130 BA_2832 BA_2836 SM00091 PAS domain BA_2836 SM00382 ATPases associated with a variety of cellular activities BA_2850 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BA_2860 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BA_2861 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_2861 SM00387 Histidine kinase-like ATPases BA_2861 SM00388 His Kinase A (phosphoacceptor) domain BA_2906 SM00382 ATPases associated with a variety of cellular activities BA_2921 SM00062 Bacterial periplasmic substrate-binding proteins BA_2922 SM00382 ATPases associated with a variety of cellular activities BA_2928 SM00028 Tetratricopeptide repeats BA_2948 SM00382 ATPases associated with a variety of cellular activities BA_2958 SM00830 Chorismate mutase type II BA_2967 SM00287 Bacterial SH3 domain homologues BA_2978 SM00382 ATPases associated with a variety of cellular activities BA_2982 SM01133 BA_2982 BA_2989 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_2993 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BA_2997 SM00346 helix_turn_helix isocitrate lyase regulation BA_3001 SM00098 Alkaline phosphatase homologues BA_3003 SM00530 Helix-turn-helix XRE-family like proteins BA_3008 SM00850 LytTr DNA-binding domain BA_3030 SM01060 BA_3030 BA_3041 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_3042 SM00889 Elongation factor G, domain IV BA_3048 SM00382 ATPases associated with a variety of cellular activities BA_3049 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_3052 SM00382 ATPases associated with a variety of cellular activities BA_3057 SM00342 helix_turn_helix, arabinose operon control protein BA_3057 SM00871 Bacterial transcription activator, effector binding domain BA_3062 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_3066 SM00387 Histidine kinase-like ATPases BA_3066 SM00388 His Kinase A (phosphoacceptor) domain BA_3067 SM00448 cheY-homologous receiver domain BA_3067 SM00862 Transcriptional regulatory protein, C terminal BA_3096 SM00797 Allophanate hydrolase subunit 2 BA_3097 SM00796 Allophanate hydrolase subunit 1 BA_3098 SM00346 helix_turn_helix isocitrate lyase regulation BA_3103 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_3118 SM00849 Metallo-beta-lactamase superfamily BA_3137 SM00870 BA_3137 BA_3138 SM00530 Helix-turn-helix XRE-family like proteins BA_3145 SM00919 Malic enzyme, NAD binding domain BA_3145 SM01274 BA_3145 BA_3153 SM00448 cheY-homologous receiver domain BA_3164 SM01060 BA_3164 BA_3191 SM00382 ATPases associated with a variety of cellular activities BA_3196 SM00226 Low molecular weight phosphatase family BA_3199 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_3201 SM00028 Tetratricopeptide repeats BA_3205 SM00344 helix_turn_helix ASNC type BA_3220 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_3229 SM00448 cheY-homologous receiver domain BA_3229 SM00862 Transcriptional regulatory protein, C terminal BA_3230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_3230 SM00387 Histidine kinase-like ATPases BA_3230 SM00388 His Kinase A (phosphoacceptor) domain BA_3243 SM00530 Helix-turn-helix XRE-family like proteins BA_3255 SM00382 ATPases associated with a variety of cellular activities BA_3257 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_3260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_3260 SM00387 Histidine kinase-like ATPases BA_3260 SM00388 His Kinase A (phosphoacceptor) domain BA_3261 SM00448 cheY-homologous receiver domain BA_3261 SM00862 Transcriptional regulatory protein, C terminal BA_3263 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_3283 SM00354 helix_turn _helix lactose operon repressor BA_3284 SM00028 Tetratricopeptide repeats BA_3291 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_3291 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_3291 SM00319 Homologues of the ligand binding domain of Tar BA_3299 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA_3305 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_3316 SM00344 helix_turn_helix ASNC type BA_3328 SM00342 helix_turn_helix, arabinose operon control protein BA_3332 SM00287 Bacterial SH3 domain homologues BA_3344 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_3349 SM00382 ATPases associated with a variety of cellular activities BA_3351 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_3364 SM00382 ATPases associated with a variety of cellular activities BA_3373 SM00530 Helix-turn-helix XRE-family like proteins BA_3374 SM01207 BA_3374 BA_3387 SM00382 ATPases associated with a variety of cellular activities BA_3390 SM00530 Helix-turn-helix XRE-family like proteins BA_3402 SM01266 BA_3402 BA_3406 SM00382 ATPases associated with a variety of cellular activities BA_3417 SM00028 Tetratricopeptide repeats BA_3422 SM01091 Transporter associated domain BA_3423 SM00422 helix_turn_helix, mercury resistance BA_3431 SM01350 BA_3431 BA_3432 SM00861 Transketolase, pyrimidine binding domain BA_3435 SM00829 Enoylreductase BA_3438 SM00829 Enoylreductase BA_3443 SM01276 BA_3443 BA_3452 SM00914 BA_3452 BA_3458 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_3458 SM00866 BA_3458 BA_3465 SM00849 Metallo-beta-lactamase superfamily BA_3478 SM00248 ankyrin repeats BA_3479 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_3480 SM00636 BA_3480 BA_3489 SM00871 Bacterial transcription activator, effector binding domain BA_3493 SM00382 ATPases associated with a variety of cellular activities BA_3500 SM00849 Metallo-beta-lactamase superfamily BA_3501 SM00641 Glycosyl hydrolases family 25 BA_3514 SM00849 Metallo-beta-lactamase superfamily BA_3544 SM00829 Enoylreductase BA_3545 SM00855 Phosphoglycerate mutase family BA_3547 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BA_3547 SM00534 ATPase domain of DNA mismatch repair MUTS family BA_3551 SM00642 Alpha-amylase domain BA_3565 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_3566 SM00829 Enoylreductase BA_3584 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA_3593 SM00479 BA_3593 BA_3594 SM00357 Cold shock protein domain BA_3599 SM01022 BA_3599 BA_3623 SM00852 Probable molybdopterin binding domain BA_3627 SM00729 Elongator protein 3, MiaB family, Radical SAM BA_3631 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BA_3631 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BA_3653 SM00382 ATPases associated with a variety of cellular activities BA_3656 SM00434 DNA Topoisomerase IV BA_3657 SM00387 Histidine kinase-like ATPases BA_3657 SM00433 TopoisomeraseII BA_3659 SM00881 CoA binding domain BA_3660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BA_3661 SM00448 cheY-homologous receiver domain BA_3661 SM00862 Transcriptional regulatory protein, C terminal BA_3665 SM01207 BA_3665 BA_3668 SM00257 Lysin motif BA_3668 SM00636 BA_3668 BA_3672 SM00479 BA_3672 BA_3676 SM00382 ATPases associated with a variety of cellular activities BA_3684 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BA_3698 SM00644 BA_3698 BA_3698 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BA_3699 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BA_3702 SM00091 PAS domain BA_3702 SM00387 Histidine kinase-like ATPases BA_3702 SM00388 His Kinase A (phosphoacceptor) domain BA_3708 SM01058 CarD-like/TRCF domain BA_3737 SM00644 BA_3737 BA_3740 SM00382 ATPases associated with a variety of cellular activities BA_3741 SM00382 ATPases associated with a variety of cellular activities BA_3744 SM00861 Transketolase, pyrimidine binding domain BA_3749 SM00382 ATPases associated with a variety of cellular activities BA_3750 SM00062 Bacterial periplasmic substrate-binding proteins BA_3753 SM00857 Resolvase, N terminal domain BA_3760 SM00028 Tetratricopeptide repeats BA_3767 SM00287 Bacterial SH3 domain homologues BA_3767 SM00644 BA_3767 BA_3818 SM00382 ATPases associated with a variety of cellular activities BA_3828 SM00530 Helix-turn-helix XRE-family like proteins BA_3829 SM00530 Helix-turn-helix XRE-family like proteins BA_3833 SM01230 BA_3833 BA_3834 SM00422 helix_turn_helix, mercury resistance BA_3839 SM00382 ATPases associated with a variety of cellular activities BA_3845 SM00287 Bacterial SH3 domain homologues BA_3848 SM00420 helix_turn_helix, Deoxyribose operon repressor BA_3848 SM01134 BA_3848 BA_3854 SM00636 BA_3854 BA_3858 SM00411 bacterial (prokaryotic) histone like domain BA_3864 SM00382 ATPases associated with a variety of cellular activities BA_3869 SM00342 helix_turn_helix, arabinose operon control protein BA_3871 SM00478 endonuclease III BA_3879 SM00052 Putative diguanylate phosphodiesterase BA_3879 SM00091 PAS domain BA_3879 SM00267 diguanylate cyclase BA_3886 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_3891 SM00148 Phospholipase C, catalytic domain (part); domain X BA_3893 SM00257 Lysin motif BA_3899 SM00387 Histidine kinase-like ATPases BA_3899 SM00388 His Kinase A (phosphoacceptor) domain BA_3900 SM00448 cheY-homologous receiver domain BA_3900 SM00862 Transcriptional regulatory protein, C terminal BA_3903 SM00382 ATPases associated with a variety of cellular activities BA_3904 SM00853 MutL C terminal dimerisation domain BA_3904 SM01340 BA_3904 BA_3905 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BA_3905 SM00534 ATPase domain of DNA mismatch repair MUTS family BA_3908 SM00729 Elongator protein 3, MiaB family, Radical SAM BA_3914 SM00322 K homology RNA-binding domain BA_3914 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA_3916 SM00852 Probable molybdopterin binding domain BA_3926 SM00382 ATPases associated with a variety of cellular activities BA_3928 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_3928 SM00866 BA_3928 BA_3930 SM00382 ATPases associated with a variety of cellular activities BA_3930 SM00843 BA_3930 BA_3933 SM00849 Metallo-beta-lactamase superfamily BA_3935 SM01130 BA_3935 BA_3937 SM00859 Semialdehyde dehydrogenase, NAD binding domain BA_3944 SM00316 Ribosomal protein S1-like RNA-binding domain BA_3944 SM00322 K homology RNA-binding domain BA_3945 SM01387 BA_3945 BA_3946 SM00904 Riboflavin kinase BA_3953 SM00316 Ribosomal protein S1-like RNA-binding domain BA_3953 SM00322 K homology RNA-binding domain BA_3955 SM00479 BA_3955 BA_3955 SM00481 DNA polymerase alpha chain like domain BA_3958 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BA_3967 SM00382 ATPases associated with a variety of cellular activities BA_3967 SM01086 C-terminal, D2-small domain, of ClpB protein BA_3971 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BA_3971 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BA_3971 SM00493 BA_3971 BA_3973 SM00881 CoA binding domain BA_3983 SM00382 ATPases associated with a variety of cellular activities BA_3983 SM00962 SRP54-type protein, GTPase domain BA_3983 SM00963 SRP54-type protein, helical bundle domain BA_3985 SM00382 ATPases associated with a variety of cellular activities BA_3985 SM00962 SRP54-type protein, GTPase domain BA_3985 SM00963 SRP54-type protein, helical bundle domain BA_3986 SM00968 SMC proteins Flexible Hinge Domain BA_3987 SM00358 Double-stranded RNA binding motif BA_3987 SM00535 Ribonuclease III family BA_3989 SM00822 BA_3989 BA_3990 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BA_3993 SM00487 DEAD-like helicases superfamily BA_3993 SM00490 helicase superfamily c-terminal domain BA_3994 SM01120 BA_3994 BA_3994 SM01121 BA_3994 BA_3997 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BA_4000 SM00220 Serine/Threonine protein kinases, catalytic domain BA_4000 SM00740 BA_4000 BA_4001 SM00331 Sigma factor PP2C-like phosphatases BA_4001 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BA_4006 SM00487 DEAD-like helicases superfamily BA_4006 SM00490 helicase superfamily c-terminal domain BA_4008 SM01409 BA_4008 BA_4009 SM00072 Guanylate kinase homologues. BA_4012 SM00831 Cation transporter/ATPase, N-terminus BA_4022 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BA_4025 SM00851 MGS-like domain BA_4025 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BA_4025 SM01209 BA_4025 BA_4026 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BA_4031 SM00363 S4 RNA-binding domain BA_4036 SM00363 S4 RNA-binding domain BA_4045 SM00864 Tubulin/FtsZ family, GTPase domain BA_4045 SM00865 Tubulin/FtsZ family, C-terminal domain BA_4046 SM00842 Cell division protein FtsA BA_4054 SM00740 BA_4054 BA_4055 SM00740 BA_4055 BA_4061 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BA_4070 SM00530 Helix-turn-helix XRE-family like proteins BA_4073 SM00644 BA_4073 BA_4096 SM00507 HNH nucleases BA_4105 SM00530 Helix-turn-helix XRE-family like proteins BA_4120 SM00382 ATPases associated with a variety of cellular activities BA_4125 SM00530 Helix-turn-helix XRE-family like proteins BA_4126 SM00530 Helix-turn-helix XRE-family like proteins BA_4130 SM00530 Helix-turn-helix XRE-family like proteins BA_4136 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BA_4144 SM00855 Phosphoglycerate mutase family BA_4157 SM00878 Biotin carboxylase C-terminal domain BA_4161 SM00670 Large family of predicted nucleotide-binding domains BA_4166 SM00838 Elongation factor G C-terminus BA_4183 SM00861 Transketolase, pyrimidine binding domain BA_4190 SM00849 Metallo-beta-lactamase superfamily BA_4203 SM00052 Putative diguanylate phosphodiesterase BA_4223 SM00387 Histidine kinase-like ATPases BA_4223 SM00388 His Kinase A (phosphoacceptor) domain BA_4226 SM00354 helix_turn _helix lactose operon repressor BA_4230 SM00642 Alpha-amylase domain BA_4231 SM00642 Alpha-amylase domain BA_4232 SM00382 ATPases associated with a variety of cellular activities BA_4239 SM00382 ATPases associated with a variety of cellular activities BA_4257 SM01007 Class II Aldolase and Adducin N-terminal domain BA_4263 SM00267 diguanylate cyclase BA_4270 SM01061 CAT RNA binding domain BA_4272 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_4272 SM00866 BA_4272 BA_4275 SM00849 Metallo-beta-lactamase superfamily BA_4295 SM00387 Histidine kinase-like ATPases BA_4297 SM00936 Penicillin-binding protein 5, C-terminal domain BA_4298 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_4299 SM00382 ATPases associated with a variety of cellular activities BA_4303 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_4307 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BA_4326 SM00354 helix_turn _helix lactose operon repressor BA_4330 SM00704 CDGSH-type zinc finger. Function unknown. BA_4336 SM00729 Elongator protein 3, MiaB family, Radical SAM BA_4336 SM00876 Biotin and Thiamin Synthesis associated domain BA_4348 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_4355 SM00859 Semialdehyde dehydrogenase, NAD binding domain BA_4364 SM00849 Metallo-beta-lactamase superfamily BA_4374 SM00382 ATPases associated with a variety of cellular activities BA_4376 SM00062 Bacterial periplasmic substrate-binding proteins BA_4376 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BA_4383 SM00861 Transketolase, pyrimidine binding domain BA_4387 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BA_4389 SM00091 PAS domain BA_4389 SM00382 ATPases associated with a variety of cellular activities BA_4394 SM00448 cheY-homologous receiver domain BA_4396 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BA_4399 SM00363 S4 RNA-binding domain BA_4400 SM00861 Transketolase, pyrimidine binding domain BA_4408 SM00878 Biotin carboxylase C-terminal domain BA_4417 SM00382 ATPases associated with a variety of cellular activities BA_4421 SM00841 Elongation factor P, C-terminal BA_4421 SM01185 BA_4421 BA_4428 SM00529 Helix-turn-helix diphteria tox regulatory element BA_4432 SM00450 Rhodanese Homology Domain BA_4433 SM00354 helix_turn _helix lactose operon repressor BA_4444 SM00382 ATPases associated with a variety of cellular activities BA_4445 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_4450 SM00487 DEAD-like helicases superfamily BA_4450 SM00490 helicase superfamily c-terminal domain BA_4459 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BA_4466 SM00382 ATPases associated with a variety of cellular activities BA_4478 SM01018 B12 binding domain BA_4483 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_4485 SM00849 Metallo-beta-lactamase superfamily BA_4493 SM00382 ATPases associated with a variety of cellular activities BA_4505 SM00382 ATPases associated with a variety of cellular activities BA_4508 SM00518 AP endonuclease family 2 BA_4509 SM00487 DEAD-like helicases superfamily BA_4509 SM00490 helicase superfamily c-terminal domain BA_4516 SM00400 zinc finger BA_4516 SM00493 BA_4516 BA_4516 SM00766 DNA primase DnaG DnaB-binding BA_4521 SM00116 Domain in cystathionine beta-synthase and other proteins. BA_4528 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA_4535 SM00729 Elongator protein 3, MiaB family, Radical SAM BA_4538 SM00271 DnaJ molecular chaperone homology domain BA_4542 SM00729 Elongator protein 3, MiaB family, Radical SAM BA_4544 SM00838 Elongation factor G C-terminus BA_4551 SM00849 Metallo-beta-lactamase superfamily BA_4553 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BA_4557 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA_4560 SM01103 BA_4560 BA_4572 SM00954 Region found in RelA / SpoT proteins BA_4574 SM00098 Alkaline phosphatase homologues BA_4580 SM00855 Phosphoglycerate mutase family BA_4590 SM00530 Helix-turn-helix XRE-family like proteins BA_4595 SM00382 ATPases associated with a variety of cellular activities BA_4614 SM00732 Likely ribonuclease with RNase H fold. BA_4616 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BA_4624 SM00028 Tetratricopeptide repeats BA_4628 SM00382 ATPases associated with a variety of cellular activities BA_4637 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA_4637 SM00954 Region found in RelA / SpoT proteins BA_4646 SM01323 BA_4646 BA_4650 SM00382 ATPases associated with a variety of cellular activities BA_4651 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BA_4655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_4659 SM00257 Lysin motif BA_4669 SM00382 ATPases associated with a variety of cellular activities BA_4671 SM00448 cheY-homologous receiver domain BA_4671 SM00862 Transcriptional regulatory protein, C terminal BA_4673 SM01317 BA_4673 BA_4692 SM00257 Lysin motif BA_4694 SM01004 Delta-aminolevulinic acid dehydratase BA_4699 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_4702 SM00382 ATPases associated with a variety of cellular activities BA_4702 SM00464 Found in ATP-dependent protease La (LON) BA_4703 SM00382 ATPases associated with a variety of cellular activities BA_4704 SM00382 ATPases associated with a variety of cellular activities BA_4704 SM00994 ClpX C4-type zinc finger BA_4704 SM01086 C-terminal, D2-small domain, of ClpB protein BA_4716 SM00909 Sporulation and spore germination BA_4724 SM00421 helix_turn_helix, Lux Regulon BA_4733 SM00382 ATPases associated with a variety of cellular activities BA_4734 SM00382 ATPases associated with a variety of cellular activities BA_4736 SM00342 helix_turn_helix, arabinose operon control protein BA_4736 SM00448 cheY-homologous receiver domain BA_4740 SM00530 Helix-turn-helix XRE-family like proteins BA_4745 SM00382 ATPases associated with a variety of cellular activities BA_4757 SM00465 GIY-YIG type nucleases (URI domain) BA_4759 SM00893 Electron transfer flavoprotein domain BA_4760 SM00893 Electron transfer flavoprotein domain BA_4774 SM00382 ATPases associated with a variety of cellular activities BA_4776 SM00387 Histidine kinase-like ATPases BA_4776 SM00388 His Kinase A (phosphoacceptor) domain BA_4777 SM00448 cheY-homologous receiver domain BA_4777 SM00862 Transcriptional regulatory protein, C terminal BA_4780 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BA_4784 SM00382 ATPases associated with a variety of cellular activities BA_4787 SM00725 NEAr Transporter domain BA_4788 SM00725 NEAr Transporter domain BA_4789 SM00725 NEAr Transporter domain BA_4792 SM00363 S4 RNA-binding domain BA_4794 SM00463 Small MutS-related domain BA_4794 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BA_4794 SM00534 ATPase domain of DNA mismatch repair MUTS family BA_4795 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BA_4795 SM00481 DNA polymerase alpha chain like domain BA_4795 SM00483 DNA polymerase X family BA_4803 SM00873 B3/4 domain BA_4803 SM00874 tRNA synthetase B5 domain BA_4803 SM00896 Ferredoxin-fold anticodon binding domain BA_4805 SM00967 RNA 2'-O ribose methyltransferase substrate binding BA_4820 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BA_4822 SM00382 ATPases associated with a variety of cellular activities BA_4827 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA_4830 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BA_4830 SM01232 BA_4830 BA_4831 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BA_4831 SM00474 3'-5' exonuclease BA_4831 SM00475 5'-3' exonuclease BA_4831 SM00482 DNA polymerase A domain BA_4832 SM00091 PAS domain BA_4832 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_4832 SM00387 Histidine kinase-like ATPases BA_4832 SM00388 His Kinase A (phosphoacceptor) domain BA_4833 SM00448 cheY-homologous receiver domain BA_4833 SM00862 Transcriptional regulatory protein, C terminal BA_4838 SM01329 BA_4838 BA_4847 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_4848 SM00919 Malic enzyme, NAD binding domain BA_4848 SM01274 BA_4848 BA_4849 SM00481 DNA polymerase alpha chain like domain BA_4858 SM00116 Domain in cystathionine beta-synthase and other proteins. BA_4860 SM00849 Metallo-beta-lactamase superfamily BA_4871 SM00530 Helix-turn-helix XRE-family like proteins BA_4873 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BA_4873 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BA_4899 SM00981 BA_4899 BA_4908 SM00363 S4 RNA-binding domain BA_4908 SM01390 BA_4908 BA_4911 SM00363 S4 RNA-binding domain BA_4917 SM00116 Domain in cystathionine beta-synthase and other proteins. BA_4920 SM00448 cheY-homologous receiver domain BA_4920 SM00862 Transcriptional regulatory protein, C terminal BA_4921 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_4921 SM00387 Histidine kinase-like ATPases BA_4921 SM00388 His Kinase A (phosphoacceptor) domain BA_4922 SM00248 ankyrin repeats BA_4929 SM00354 helix_turn _helix lactose operon repressor BA_4940 SM00843 BA_4940 BA_4949 SM00849 Metallo-beta-lactamase superfamily BA_4953 SM00642 Alpha-amylase domain BA_4957 SM00420 helix_turn_helix, Deoxyribose operon repressor BA_4958 SM00363 S4 RNA-binding domain BA_4962 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA_4967 SM01058 CarD-like/TRCF domain BA_4974 SM00852 Probable molybdopterin binding domain BA_4981 SM00450 Rhodanese Homology Domain BA_4997 SM00382 ATPases associated with a variety of cellular activities BA_5001 SM00729 Elongator protein 3, MiaB family, Radical SAM BA_5003 SM00382 ATPases associated with a variety of cellular activities BA_5011 SM00014 Acid phosphatase homologues BA_5014 SM00852 Probable molybdopterin binding domain BA_5028 SM00387 Histidine kinase-like ATPases BA_5029 SM00387 Histidine kinase-like ATPases BA_5029 SM00388 His Kinase A (phosphoacceptor) domain BA_5037 SM00382 ATPases associated with a variety of cellular activities BA_5048 SM01234 BA_5048 BA_5049 SM00947 Carbonic anhydrase BA_5054 SM00894 Excalibur calcium-binding domain BA_5065 SM00899 BA_5065 BA_5067 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_5067 SM00387 Histidine kinase-like ATPases BA_5067 SM00388 His Kinase A (phosphoacceptor) domain BA_5068 SM00448 cheY-homologous receiver domain BA_5068 SM00862 Transcriptional regulatory protein, C terminal BA_5075 SM00046 Diacylglycerol kinase catalytic domain (presumed) BA_5085 SM00382 ATPases associated with a variety of cellular activities BA_5086 SM00342 helix_turn_helix, arabinose operon control protein BA_5086 SM00871 Bacterial transcription activator, effector binding domain BA_5087 SM00448 cheY-homologous receiver domain BA_5087 SM00862 Transcriptional regulatory protein, C terminal BA_5088 SM00387 Histidine kinase-like ATPases BA_5091 SM00382 ATPases associated with a variety of cellular activities BA_5096 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA_5096 SM00866 BA_5096 BA_5105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_5105 SM00387 Histidine kinase-like ATPases BA_5105 SM00388 His Kinase A (phosphoacceptor) domain BA_5106 SM00448 cheY-homologous receiver domain BA_5106 SM00862 Transcriptional regulatory protein, C terminal BA_5107 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BA_5115 SM00357 Cold shock protein domain BA_5123 SM00642 Alpha-amylase domain BA_5132 SM00316 Ribosomal protein S1-like RNA-binding domain BA_5134 SM00344 helix_turn_helix ASNC type BA_5141 SM01298 BA_5141 BA_5142 SM00479 BA_5142 BA_5162 SM00871 Bacterial transcription activator, effector binding domain BA_5175 SM00382 ATPases associated with a variety of cellular activities BA_5180 SM00860 SMI1 / KNR4 family BA_5193 SM00420 helix_turn_helix, Deoxyribose operon repressor BA_5200 SM00422 helix_turn_helix, mercury resistance BA_5203 SM00855 Phosphoglycerate mutase family BA_5205 SM00729 Elongator protein 3, MiaB family, Radical SAM BA_5217 SM00382 ATPases associated with a variety of cellular activities BA_5222 SM00382 ATPases associated with a variety of cellular activities BA_5222 SM00930 BA_5222 BA_5226 SM00493 BA_5226 BA_5245 SM00849 Metallo-beta-lactamase superfamily BA_5256 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_5256 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_5270 SM00530 Helix-turn-helix XRE-family like proteins BA_5275 SM00448 cheY-homologous receiver domain BA_5275 SM00862 Transcriptional regulatory protein, C terminal BA_5276 SM00387 Histidine kinase-like ATPases BA_5276 SM00388 His Kinase A (phosphoacceptor) domain BA_5280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_5280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_5284 SM00347 helix_turn_helix multiple antibiotic resistance protein BA_5305 SM01276 BA_5305 BA_5314 SM00363 S4 RNA-binding domain BA_5316 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BA_5317 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_5327 SM00382 ATPases associated with a variety of cellular activities BA_5331 SM00448 cheY-homologous receiver domain BA_5331 SM00862 Transcriptional regulatory protein, C terminal BA_5334 SM00316 Ribosomal protein S1-like RNA-binding domain BA_5334 SM00357 Cold shock protein domain BA_5334 SM00955 BA_5334 BA_5357 SM00507 HNH nucleases BA_5364 SM01192 BA_5364 BA_5364 SM01193 BA_5364 BA_5369 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA_5388 SM00028 Tetratricopeptide repeats BA_5396 SM00487 DEAD-like helicases superfamily BA_5396 SM00490 helicase superfamily c-terminal domain BA_5400 SM00422 helix_turn_helix, mercury resistance BA_5404 SM00530 Helix-turn-helix XRE-family like proteins BA_5407 SM00422 helix_turn_helix, mercury resistance BA_5409 SM00382 ATPases associated with a variety of cellular activities BA_5411 SM00382 ATPases associated with a variety of cellular activities BA_5414 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BA_5414 SM00245 tail specific protease BA_5416 SM00382 ATPases associated with a variety of cellular activities BA_5421 SM00957 SecA DEAD-like domain BA_5421 SM00958 SecA preprotein cross-linking domain BA_5424 SM00357 Cold shock protein domain BA_5426 SM00487 DEAD-like helicases superfamily BA_5426 SM00490 helicase superfamily c-terminal domain BA_5434 SM00984 UDP binding domain BA_5437 SM00382 ATPases associated with a variety of cellular activities BA_5438 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BA_5481 SM00287 Bacterial SH3 domain homologues BA_5487 SM00487 DEAD-like helicases superfamily BA_5487 SM00490 helicase superfamily c-terminal domain BA_5496 SM00382 ATPases associated with a variety of cellular activities BA_5498 SM00530 Helix-turn-helix XRE-family like proteins BA_5503 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_5503 SM00387 Histidine kinase-like ATPases BA_5503 SM00388 His Kinase A (phosphoacceptor) domain BA_5504 SM00448 cheY-homologous receiver domain BA_5504 SM00862 Transcriptional regulatory protein, C terminal BA_5510 SM00287 Bacterial SH3 domain homologues BA_5510 SM00382 ATPases associated with a variety of cellular activities BA_5512 SM00984 UDP binding domain BA_5526 SM00382 ATPases associated with a variety of cellular activities BA_5543 SM00052 Putative diguanylate phosphodiesterase BA_5543 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BA_5543 SM00091 PAS domain BA_5543 SM00267 diguanylate cyclase BA_5547 SM00382 ATPases associated with a variety of cellular activities BA_5561 SM00226 Low molecular weight phosphatase family BA_5565 SM00903 Flavin reductase like domain BA_5572 SM00937 BA_5572 BA_5575 SM00357 Cold shock protein domain BA_5575 SM00382 ATPases associated with a variety of cellular activities BA_5575 SM00959 Rho termination factor, N-terminal domain BA_5581 SM00448 cheY-homologous receiver domain BA_5591 SM00155 Phospholipase D. Active site motifs. BA_5593 SM00052 Putative diguanylate phosphodiesterase BA_5593 SM00267 diguanylate cyclase BA_5597 SM00421 helix_turn_helix, Lux Regulon BA_5597 SM00448 cheY-homologous receiver domain BA_5598 SM00387 Histidine kinase-like ATPases BA_5600 SM00382 ATPases associated with a variety of cellular activities BA_5611 SM00836 DALR anticodon binding domain BA_5611 SM01016 Arginyl tRNA synthetase N terminal dom BA_5621 SM00422 helix_turn_helix, mercury resistance BA_5627 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA_5629 SM00382 ATPases associated with a variety of cellular activities BA_5639 SM00936 Penicillin-binding protein 5, C-terminal domain BA_5648 SM00986 Uracil DNA glycosylase superfamily BA_5648 SM00987 UreE urease accessory protein, C-terminal domain BA_5650 SM00382 ATPases associated with a variety of cellular activities BA_5652 SM00354 helix_turn _helix lactose operon repressor BA_5659 SM00100 Cyclic nucleotide-monophosphate binding domain BA_5661 SM00421 helix_turn_helix, Lux Regulon BA_5661 SM00448 cheY-homologous receiver domain BA_5664 SM00267 diguanylate cyclase BA_5667 SM00448 cheY-homologous receiver domain BA_5667 SM00850 LytTr DNA-binding domain BA_5673 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA_5678 SM00382 ATPases associated with a variety of cellular activities BA_5691 SM00448 cheY-homologous receiver domain BA_5691 SM00850 LytTr DNA-binding domain BA_5692 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA_5692 SM00387 Histidine kinase-like ATPases BA_5703 SM00487 DEAD-like helicases superfamily BA_5703 SM00490 helicase superfamily c-terminal domain BA_5705 SM01240 BA_5705 BA_5710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BA_5711 SM00849 Metallo-beta-lactamase superfamily BA_5714 SM00091 PAS domain BA_5714 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA_5714 SM00387 Histidine kinase-like ATPases BA_5714 SM00388 His Kinase A (phosphoacceptor) domain BA_5715 SM00448 cheY-homologous receiver domain BA_5715 SM00862 Transcriptional regulatory protein, C terminal BA_5716 SM00788 Adenylosuccinate synthetase BA_5719 SM00267 diguanylate cyclase BA_5729 SM00470 ParB-like nuclease domain BA_5731 SM00470 ParB-like nuclease domain BA_5733 SM01228 BA_5733 BA_5735 SM00393 Putative single-stranded nucleic acids-binding domain BA_5735 SM01245 BA_5735