locus-tag class description BAS0001 PF00308 Bacterial dnaA protein BAS0001 PF08299 Bacterial dnaA protein helix-turn-helix BAS0001 PF11638 DnaA N-terminal domain BAS0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BAS0002 PF02767 DNA polymerase III beta subunit, central domain BAS0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BAS0004 PF02463 RecF/RecN/SMC N terminal domain BAS0005 PF01751 Toprim domain BAS0005 PF00204 DNA gyrase B BAS0005 PF00986 DNA gyrase B subunit, carboxyl terminus BAS0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS0006 PF00521 DNA gyrase/topoisomerase IV, subunit A BAS0006 PF03989 DNA gyrase C-terminal domain, beta-propeller BAS0009 PF14175 YaaC-like Protein BAS0011 PF00478 IMP dehydrogenase / GMP reductase domain BAS0011 PF00571 CBS domain BAS0012 PF00768 D-alanyl-D-alanine carboxypeptidase BAS0012 PF07943 Penicillin-binding protein 5, C-terminal domain BAS0013 PF01680 SOR/SNZ family BAS0014 PF01174 SNO glutamine amidotransferase family BAS0015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAS0015 PF02403 Seryl-tRNA synthetase N-terminal domain BAS0017 PF01712 Deoxynucleoside kinase BAS0018 PF01712 Deoxynucleoside kinase BAS0019 PF00857 Isochorismatase family BAS0020 PF14437 MafB19-like deaminase BAS0021 PF12169 DNA polymerase III subunits gamma and tau domain III BAS0022 PF02575 YbaB/EbfC DNA-binding family BAS0023 PF13662 Toprim domain BAS0023 PF02132 RecR protein BAS0024 PF10704 Protein of unknown function (DUF2508) BAS0025 PF07441 SigmaK-factor processing regulatory protein BofA BAS0028 PF01276 Orn/Lys/Arg decarboxylase, major domain BAS0028 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BAS0029 PF02223 Thymidylate kinase BAS0030 PF09115 DNA polymerase III, delta subunit, C terminal BAS0031 PF04468 PSP1 C-terminal conserved region BAS0032 PF06156 Initiation control protein YabA BAS0033 PF05175 Methyltransferase small domain BAS0034 PF01541 GIY-YIG catalytic domain BAS0035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAS0036 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAS0036 PF18277 AbrB C-terminal domain BAS0037 PF08264 Anticodon-binding domain of tRNA BAS0037 PF09334 tRNA synthetases class I (M) BAS0037 PF01588 Putative tRNA binding domain BAS0038 PF01026 TatD related DNase BAS0039 PF13662 Toprim domain BAS0039 PF13331 Domain of unknown function (DUF4093) BAS0040 PF00398 Ribosomal RNA adenine dimethylase BAS0041 PF05582 YabG peptidase U57 BAS0042 PF06257 Biofilm formation stimulator VEG BAS0043 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAS0044 PF08544 GHMP kinases C terminal BAS0044 PF00288 GHMP kinases N terminal domain BAS0045 PF00156 Phosphoribosyl transferase domain BAS0045 PF09182 Bacterial purine repressor, N-terminal BAS0046 PF01042 Endoribonuclease L-PSP BAS0047 PF04026 SpoVG BAS0048 PF00483 Nucleotidyl transferase BAS0048 PF00132 Bacterial transferase hexapeptide (six repeats) BAS0049 PF14572 Phosphoribosyl synthetase-associated domain BAS0049 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BAS0050 PF01195 Peptidyl-tRNA hydrolase BAS0052 PF02559 CarD-like/TRCF domain BAS0052 PF17757 UvrB interaction domain BAS0052 PF00271 Helicase conserved C-terminal domain BAS0052 PF00270 DEAD/DEAH box helicase BAS0052 PF03461 TRCF domain BAS0053 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAS0053 PF15714 Stage V sporulation protein T C-terminal, transcription factor BAS0054 PF14667 Polysaccharide biosynthesis C-terminal domain BAS0054 PF01943 Polysaccharide biosynthesis protein BAS0055 PF03819 MazG nucleotide pyrophosphohydrolase domain BAS0055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAS0056 PF01479 S4 domain BAS0057 PF07873 YabP family BAS0058 PF09578 Spore cortex protein YabQ (Spore_YabQ) BAS0060 PF00575 S1 RNA binding domain BAS0061 PF07228 Stage II sporulation protein E (SpoIIE) BAS0062 PF11734 TilS substrate C-terminal domain BAS0062 PF09179 TilS substrate binding domain BAS0062 PF01171 PP-loop family BAS0063 PF00156 Phosphoribosyl transferase domain BAS0064 PF00004 ATPase family associated with various cellular activities (AAA) BAS0064 PF17862 AAA+ lid domain BAS0064 PF06480 FtsH Extracellular BAS0064 PF01434 Peptidase family M41 BAS0065 PF03309 Type III pantothenate kinase BAS0066 PF01430 Hsp33 protein BAS0067 PF00291 Pyridoxal-phosphate dependent enzyme BAS0068 PF00425 chorismate binding enzyme BAS0068 PF04715 Anthranilate synthase component I, N terminal region BAS0069 PF00117 Glutamine amidotransferase class-I BAS0070 PF01063 Amino-transferase class IV BAS0071 PF00809 Pterin binding enzyme BAS0072 PF02152 Dihydroneopterin aldolase BAS0073 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BAS0074 PF01381 Helix-turn-helix BAS0075 PF01207 Dihydrouridine synthase (Dus) BAS0076 PF01336 OB-fold nucleic acid binding domain BAS0076 PF00152 tRNA synthetases class II (D, K and N) BAS0078 PF05848 CtsR N-terminal HTH domain BAS0078 PF17727 CtsR C-terminal dimerization domain BAS0079 PF02151 UvrB/uvrC motif BAS0080 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BAS0081 PF00004 ATPase family associated with various cellular activities (AAA) BAS0081 PF10431 C-terminal, D2-small domain, of ClpB protein BAS0081 PF07724 AAA domain (Cdc48 subfamily) BAS0081 PF17871 AAA lid domain BAS0081 PF02861 Clp amino terminal domain, pathogenicity island component BAS0082 PF18073 Rubredoxin metal binding domain BAS0083 PF10635 DisA bacterial checkpoint controller linker region BAS0083 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAS0085 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BAS0086 PF02542 YgbB family BAS0087 PF00749 tRNA synthetases class I (E and Q), catalytic domain BAS0088 PF06426 Serine acetyltransferase, N-terminal BAS0088 PF00132 Bacterial transferase hexapeptide (six repeats) BAS0089 PF01406 tRNA synthetases class I (C) catalytic domain BAS0089 PF09190 DALR domain BAS0090 PF00636 Ribonuclease III domain BAS0091 PF00588 SpoU rRNA Methylase family BAS0091 PF08032 RNA 2'-O ribose methyltransferase substrate binding BAS0092 PF05991 YacP-like NYN domain BAS0093 PF08281 Sigma-70, region 4 BAS0093 PF04542 Sigma-70 region 2 BAS0094 PF00471 Ribosomal protein L33 BAS0095 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BAS0096 PF00467 KOW motif BAS0096 PF02357 Transcription termination factor nusG BAS0097 PF00298 Ribosomal protein L11, RNA binding domain BAS0097 PF03946 Ribosomal protein L11, N-terminal domain BAS0098 PF00687 Ribosomal protein L1p/L10e family BAS0099 PF00466 Ribosomal protein L10 BAS0100 PF00542 Ribosomal protein L7/L12 C-terminal domain BAS0100 PF16320 Ribosomal protein L7/L12 dimerisation domain BAS0101 PF05175 Methyltransferase small domain BAS0102 PF10385 RNA polymerase beta subunit external 1 domain BAS0102 PF04560 RNA polymerase Rpb2, domain 7 BAS0102 PF00562 RNA polymerase Rpb2, domain 6 BAS0102 PF04565 RNA polymerase Rpb2, domain 3 BAS0102 PF04563 RNA polymerase beta subunit BAS0102 PF04561 RNA polymerase Rpb2, domain 2 BAS0103 PF04998 RNA polymerase Rpb1, domain 5 BAS0103 PF04997 RNA polymerase Rpb1, domain 1 BAS0103 PF05000 RNA polymerase Rpb1, domain 4 BAS0103 PF00623 RNA polymerase Rpb1, domain 2 BAS0103 PF04983 RNA polymerase Rpb1, domain 3 BAS0104 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BAS0105 PF00164 Ribosomal protein S12/S23 BAS0106 PF00177 Ribosomal protein S7p/S5e BAS0107 PF14492 Elongation Factor G, domain II BAS0107 PF03144 Elongation factor Tu domain 2 BAS0107 PF00009 Elongation factor Tu GTP binding domain BAS0107 PF03764 Elongation factor G, domain IV BAS0107 PF00679 Elongation factor G C-terminus BAS0108 PF03144 Elongation factor Tu domain 2 BAS0108 PF00009 Elongation factor Tu GTP binding domain BAS0108 PF03143 Elongation factor Tu C-terminal domain BAS0109 PF00338 Ribosomal protein S10p/S20e BAS0110 PF00297 Ribosomal protein L3 BAS0111 PF00573 Ribosomal protein L4/L1 family BAS0112 PF00276 Ribosomal protein L23 BAS0113 PF03947 Ribosomal Proteins L2, C-terminal domain BAS0113 PF00181 Ribosomal Proteins L2, RNA binding domain BAS0114 PF00203 Ribosomal protein S19 BAS0115 PF00237 Ribosomal protein L22p/L17e BAS0116 PF07650 KH domain BAS0116 PF00189 Ribosomal protein S3, C-terminal domain BAS0117 PF00252 Ribosomal protein L16p/L10e BAS0118 PF00831 Ribosomal L29 protein BAS0119 PF00366 Ribosomal protein S17 BAS0120 PF00238 Ribosomal protein L14p/L23e BAS0121 PF00467 KOW motif BAS0121 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BAS0122 PF00673 ribosomal L5P family C-terminus BAS0122 PF00281 Ribosomal protein L5 BAS0123 PF00253 Ribosomal protein S14p/S29e BAS0124 PF00410 Ribosomal protein S8 BAS0125 PF00347 Ribosomal protein L6 BAS0126 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BAS0127 PF00333 Ribosomal protein S5, N-terminal domain BAS0127 PF03719 Ribosomal protein S5, C-terminal domain BAS0128 PF00327 Ribosomal protein L30p/L7e BAS0129 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BAS0130 PF00344 SecY translocase BAS0131 PF05191 Adenylate kinase, active site lid BAS0132 PF00557 Metallopeptidase family M24 BAS0133 PF01176 Translation initiation factor 1A / IF-1 BAS0134 PF00444 Ribosomal protein L36 BAS0135 PF00416 Ribosomal protein S13/S18 BAS0136 PF00411 Ribosomal protein S11 BAS0137 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BAS0137 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BAS0137 PF01000 RNA polymerase Rpb3/RpoA insert domain BAS0138 PF01196 Ribosomal protein L17 BAS0139 PF00005 ABC transporter BAS0140 PF00005 ABC transporter BAS0141 PF02361 Cobalt transport protein BAS0142 PF01416 tRNA pseudouridine synthase BAS0143 PF00572 Ribosomal protein L13 BAS0144 PF00380 Ribosomal protein S9/S16 BAS0146 PF01520 N-acetylmuramoyl-L-alanine amidase BAS0147 PF10609 NUBPL iron-transfer P-loop NTPase BAS0148 PF17898 Spore germination GerD central core domain BAS0149 PF14089 KinB-signalling pathway activation in sporulation BAS0150 PF01522 Polysaccharide deacetylase BAS0155 PF00491 Arginase family BAS0156 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAS0157 PF07949 YbbR-like protein BAS0158 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BAS0158 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BAS0158 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BAS0158 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BAS0160 PF01380 SIS domain BAS0161 PF00561 alpha/beta hydrolase fold BAS0162 PF07729 FCD domain BAS0162 PF00392 Bacterial regulatory proteins, gntR family BAS0165 PF02447 GntP family permease BAS0166 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAS0166 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BAS0167 PF07676 WD40-like Beta Propeller Repeat BAS0167 PF00326 Prolyl oligopeptidase family BAS0175 PF00528 Binding-protein-dependent transport system inner membrane component BAS0176 PF09383 NIL domain BAS0176 PF00005 ABC transporter BAS0177 PF03180 NLPA lipoprotein BAS0178 PF08240 Alcohol dehydrogenase GroES-like domain BAS0178 PF00107 Zinc-binding dehydrogenase BAS0180 PF01565 FAD binding domain BAS0181 PF07690 Major Facilitator Superfamily BAS0183 PF07690 Major Facilitator Superfamily BAS0186 PF00528 Binding-protein-dependent transport system inner membrane component BAS0187 PF12911 N-terminal TM domain of oligopeptide transport permease C BAS0187 PF00528 Binding-protein-dependent transport system inner membrane component BAS0188 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS0188 PF00005 ABC transporter BAS0189 PF00005 ABC transporter BAS0189 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS0190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS0192 PF12833 Helix-turn-helix domain BAS0195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS0196 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS0197 PF00248 Aldo/keto reductase family BAS0198 PF03807 NADP oxidoreductase coenzyme F420-dependent BAS0198 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAS0199 PF04973 Nicotinamide mononucleotide transporter BAS0200 PF06800 Sugar transport protein BAS0201 PF00528 Binding-protein-dependent transport system inner membrane component BAS0204 PF12727 PBP superfamily domain BAS0204 PF12728 Helix-turn-helix domain BAS0205 PF03466 LysR substrate binding domain BAS0205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS0206 PF00892 EamA-like transporter family BAS0207 PF01553 Acyltransferase BAS0208 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAS0208 PF00356 Bacterial regulatory proteins, lacI family BAS0210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS0210 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAS0212 PF01026 TatD related DNase BAS0213 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BAS0217 PF12848 ABC transporter BAS0217 PF00005 ABC transporter BAS0217 PF16326 ABC transporter C-terminal domain BAS0218 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS0219 PF00528 Binding-protein-dependent transport system inner membrane component BAS0220 PF12911 N-terminal TM domain of oligopeptide transport permease C BAS0220 PF00528 Binding-protein-dependent transport system inner membrane component BAS0221 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS0221 PF00005 ABC transporter BAS0222 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS0222 PF00005 ABC transporter BAS0226 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS0227 PF01557 Fumarylacetoacetate (FAA) hydrolase family BAS0229 PF07690 Major Facilitator Superfamily BAS0232 PF08245 Mur ligase middle domain BAS0232 PF01225 Mur ligase family, catalytic domain BAS0232 PF02875 Mur ligase family, glutamate ligase domain BAS0233 PF00271 Helicase conserved C-terminal domain BAS0233 PF00270 DEAD/DEAH box helicase BAS0234 PF03851 UV-endonuclease UvdE BAS0235 PF01694 Rhomboid family BAS0236 PF01648 4'-phosphopantetheinyl transferase superfamily BAS0238 PF01168 Alanine racemase, N-terminal domain BAS0238 PF00842 Alanine racemase, C-terminal domain BAS0239 PF01402 Ribbon-helix-helix protein, copG family BAS0240 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BAS0241 PF09371 Tex-like protein N-terminal domain BAS0241 PF16921 Tex protein YqgF-like domain BAS0241 PF00575 S1 RNA binding domain BAS0241 PF17674 HHH domain BAS0242 PF17283 SprT-like zinc ribbon domain BAS0242 PF10263 SprT-like family BAS0244 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BAS0245 PF00814 Glycoprotease family BAS0246 PF00583 Acetyltransferase (GNAT) family BAS0247 PF00814 Glycoprotease family BAS0248 PF16326 ABC transporter C-terminal domain BAS0248 PF00005 ABC transporter BAS0248 PF12848 ABC transporter BAS0249 PF06971 Putative DNA-binding protein N-terminus BAS0249 PF02629 CoA binding domain BAS0251 PF02517 CPBP intramembrane metalloprotease BAS0252 PF00166 Chaperonin 10 Kd subunit BAS0253 PF00118 TCP-1/cpn60 chaperonin family BAS0254 PF02540 NAD synthase BAS0254 PF00117 Glutamine amidotransferase class-I BAS0254 PF00958 GMP synthase C terminal domain BAS0255 PF00860 Permease family BAS0256 PF00072 Response regulator receiver domain BAS0256 PF00486 Transcriptional regulatory protein, C terminal BAS0257 PF16736 Single Cache-like BAS0257 PF00989 PAS fold BAS0257 PF00512 His Kinase A (phospho-acceptor) domain BAS0257 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS0259 PF05045 Rhamnan synthesis protein F BAS0259 PF14307 Glycosyltransferase WbsX BAS0261 PF08241 Methyltransferase domain BAS0263 PF16363 GDP-mannose 4,6 dehydratase BAS0266 PF00535 Glycosyl transferase family 2 BAS0269 PF02673 Bacitracin resistance protein BacA BAS0271 PF00005 ABC transporter BAS0272 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS0272 PF00512 His Kinase A (phospho-acceptor) domain BAS0273 PF00072 Response regulator receiver domain BAS0273 PF00486 Transcriptional regulatory protein, C terminal BAS0275 PF00731 AIR carboxylase BAS0276 PF02222 ATP-grasp domain BAS0276 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BAS0277 PF10397 Adenylosuccinate lyase C-terminus BAS0277 PF00206 Lyase BAS0278 PF01259 SAICAR synthetase BAS0279 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BAS0281 PF02769 AIR synthase related protein, C-terminal domain BAS0281 PF00586 AIR synthase related protein, N-terminal domain BAS0281 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BAS0282 PF00156 Phosphoribosyl transferase domain BAS0283 PF02769 AIR synthase related protein, C-terminal domain BAS0283 PF00586 AIR synthase related protein, N-terminal domain BAS0284 PF00551 Formyl transferase BAS0285 PF01808 AICARFT/IMPCHase bienzyme BAS0285 PF02142 MGS-like domain BAS0286 PF02844 Phosphoribosylglycinamide synthetase, N domain BAS0286 PF02843 Phosphoribosylglycinamide synthetase, C domain BAS0286 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BAS0290 PF01884 PcrB family BAS0291 PF13361 UvrD-like helicase C-terminal domain BAS0291 PF00580 UvrD/REP helicase N-terminal domain BAS0292 PF00533 BRCA1 C Terminus (BRCT) domain BAS0292 PF03120 NAD-dependent DNA ligase OB-fold domain BAS0292 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BAS0292 PF12826 Helix-hairpin-helix motif BAS0292 PF01653 NAD-dependent DNA ligase adenylation domain BAS0293 PF07537 CamS sex pheromone cAM373 precursor BAS0294 PF01925 Sulfite exporter TauE/SafE BAS0295 PF00171 Aldehyde dehydrogenase family BAS0296 PF00857 Isochorismatase family BAS0297 PF09383 NIL domain BAS0297 PF00005 ABC transporter BAS0298 PF00528 Binding-protein-dependent transport system inner membrane component BAS0299 PF03180 NLPA lipoprotein BAS0302 PF17886 HSP20-like domain found in ArsA BAS0302 PF02374 Anion-transporting ATPase BAS0304 PF01047 MarR family BAS0305 PF02686 Glu-tRNAGln amidotransferase C subunit BAS0306 PF01425 Amidase BAS0307 PF02934 GatB/GatE catalytic domain BAS0307 PF02637 GatB domain BAS0308 PF00781 Diacylglycerol kinase catalytic domain BAS0309 PF13419 Haloacid dehalogenase-like hydrolase BAS0310 PF00202 Aminotransferase class-III BAS0311 PF00158 Sigma-54 interaction domain BAS0312 PF00171 Aldehyde dehydrogenase family BAS0313 PF00893 Small Multidrug Resistance protein BAS0314 PF02073 Thermophilic metalloprotease (M29) BAS0317 PF07670 Nucleoside recognition BAS0317 PF01773 Na+ dependent nucleoside transporter N-terminus BAS0317 PF07662 Na+ dependent nucleoside transporter C-terminus BAS0318 PF02475 Met-10+ like-protein BAS0318 PF05958 tRNA (Uracil-5-)-methyltransferase BAS0318 PF01938 TRAM domain BAS0319 PF01207 Dihydrouridine synthase (Dus) BAS0321 PF07308 Protein of unknown function (DUF1456) BAS0324 PF13378 Enolase C-terminal domain-like BAS0324 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BAS0326 PF03553 Na+/H+ antiporter family BAS0327 PF01546 Peptidase family M20/M25/M40 BAS0327 PF07687 Peptidase dimerisation domain BAS0329 PF13192 Thioredoxin domain BAS0329 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS0330 PF00578 AhpC/TSA family BAS0331 PF01636 Phosphotransferase enzyme family BAS0332 PF01008 Initiation factor 2 subunit family BAS0333 PF00596 Class II Aldolase and Adducin N-terminal domain BAS0334 PF01032 FecCD transport family BAS0335 PF01032 FecCD transport family BAS0336 PF01497 Periplasmic binding protein BAS0337 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS0339 PF12728 Helix-turn-helix domain BAS0348 PF10127 RNA repair pathway DNA polymerase beta family BAS0349 PF07690 Major Facilitator Superfamily BAS0350 PF01266 FAD dependent oxidoreductase BAS0350 PF00355 Rieske [2Fe-2S] domain BAS0352 PF00528 Binding-protein-dependent transport system inner membrane component BAS0353 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAS0354 PF00005 ABC transporter BAS0355 PF00672 HAMP domain BAS0355 PF12729 Four helix bundle sensory module for signal transduction BAS0355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS0356 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS0356 PF00672 HAMP domain BAS0356 PF12729 Four helix bundle sensory module for signal transduction BAS0357 PF16657 Maltogenic Amylase, C-terminal domain BAS0357 PF00128 Alpha amylase, catalytic domain BAS0358 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAS0358 PF00367 phosphotransferase system, EIIB BAS0358 PF02378 Phosphotransferase system, EIIC BAS0359 PF03372 Endonuclease/Exonuclease/phosphatase family BAS0360 PF01061 ABC-2 type transporter BAS0361 PF01751 Toprim domain BAS0361 PF01131 DNA topoisomerase BAS0362 PF02110 Hydroxyethylthiazole kinase family BAS0363 PF02581 Thiamine monophosphate synthase BAS0364 PF03605 Anaerobic c4-dicarboxylate membrane transporter BAS0365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS0365 PF00672 HAMP domain BAS0366 PF01910 Thiamine-binding protein BAS0367 PF00528 Binding-protein-dependent transport system inner membrane component BAS0369 PF00005 ABC transporter BAS0370 PF12848 ABC transporter BAS0370 PF00005 ABC transporter BAS0371 PF00041 Fibronectin type III domain BAS0371 PF00704 Glycosyl hydrolases family 18 BAS0375 PF08360 QacR-like protein, C-terminal region BAS0375 PF00440 Bacterial regulatory proteins, tetR family BAS0379 PF11700 Vacuole effluxer Atg22 like BAS0382 PF09180 Prolyl-tRNA synthetase, C-terminal BAS0382 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAS0382 PF03129 Anticodon binding domain BAS0384 PF00480 ROK family BAS0385 PF02342 TerD domain BAS0386 PF02342 TerD domain BAS0387 PF02342 TerD domain BAS0388 PF03741 Integral membrane protein TerC family BAS0389 PF14266 Putative component of 'biosynthetic module' BAS0390 PF05816 Toxic anion resistance protein (TelA) BAS0391 PF00689 Cation transporting ATPase, C-terminus BAS0391 PF00690 Cation transporter/ATPase, N-terminus BAS0392 PF06569 Protein of unknown function (DUF1128) BAS0393 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAS0395 PF03631 Virulence factor BrkB BAS0398 PF00892 EamA-like transporter family BAS0403 PF09335 SNARE associated Golgi protein BAS0405 PF16242 Pyridoxamine 5'-phosphate oxidase like BAS0406 PF01699 Sodium/calcium exchanger protein BAS0407 PF14167 YfkD-like protein BAS0408 PF04055 Radical SAM superfamily BAS0408 PF08756 YfkB-like domain BAS0410 PF05681 Fumarate hydratase (Fumerase) BAS0410 PF05683 Fumarase C-terminus BAS0411 PF01522 Polysaccharide deacetylase BAS0414 PF01938 TRAM domain BAS0414 PF05958 tRNA (Uracil-5-)-methyltransferase BAS0415 PF14659 Phage integrase, N-terminal SAM-like domain BAS0415 PF00589 Phage integrase family BAS0416 PF01381 Helix-turn-helix BAS0418 PF01381 Helix-turn-helix BAS0425 PF07319 Primosomal protein DnaI N-terminus BAS0425 PF01695 IstB-like ATP binding protein BAS0460 PF01183 Glycosyl hydrolases family 25 BAS0462 PF01416 tRNA pseudouridine synthase BAS0464 PF00158 Sigma-54 interaction domain BAS0464 PF13426 PAS domain BAS0464 PF02954 Bacterial regulatory protein, Fis family BAS0466 PF00324 Amino acid permease BAS0467 PF07687 Peptidase dimerisation domain BAS0467 PF01546 Peptidase family M20/M25/M40 BAS0471 PF04960 Glutaminase BAS0472 PF02378 Phosphotransferase system, EIIC BAS0472 PF00367 phosphotransferase system, EIIB BAS0473 PF00144 Beta-lactamase BAS0476 PF00535 Glycosyl transferase family 2 BAS0479 PF01370 NAD dependent epimerase/dehydratase family BAS0479 PF02911 Formyl transferase, C-terminal domain BAS0479 PF00551 Formyl transferase BAS0480 PF00535 Glycosyl transferase family 2 BAS0481 PF01228 Glycine radical BAS0481 PF02901 Pyruvate formate lyase-like BAS0482 PF04055 Radical SAM superfamily BAS0483 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BAS0483 PF04101 Glycosyltransferase family 28 C-terminal domain BAS0485 PF01979 Amidohydrolase family BAS0486 PF01370 NAD dependent epimerase/dehydratase family BAS0486 PF08338 Domain of unknown function (DUF1731) BAS0487 PF02631 RecX family BAS0489 PF14043 WVELL protein BAS0489a PF08176 Small acid-soluble spore protein K family BAS0490 PF04307 LexA-binding, inner membrane-associated putative hydrolase BAS0491 PF14815 NUDIX domain BAS0491 PF00730 HhH-GPD superfamily base excision DNA repair protein BAS0493 PF04259 Small, acid-soluble spore protein, gamma-type BAS0494 PF14182 YgaB-like protein BAS0495 PF04167 Protein of unknown function (DUF402) BAS0496 PF00664 ABC transporter transmembrane region BAS0496 PF00005 ABC transporter BAS0497 PF06081 Aromatic acid exporter family member 1 BAS0498 PF01493 GXGXG motif BAS0498 PF04898 Glutamate synthase central domain BAS0498 PF01645 Conserved region in glutamate synthase BAS0498 PF00310 Glutamine amidotransferases class-II BAS0499 PF00202 Aminotransferase class-III BAS0500 PF00005 ABC transporter BAS0503 PF07885 Ion channel BAS0504 PF00578 AhpC/TSA family BAS0505 PF01475 Ferric uptake regulator family BAS0506 PF11023 Zinc-ribbon containing domain BAS0510 PF01709 Transcriptional regulator BAS0511 PF13344 Haloacid dehalogenase-like hydrolase BAS0511 PF00293 NUDIX domain BAS0512 PF00905 Penicillin binding protein transpeptidase domain BAS0512 PF00912 Transglycosylase BAS0513 PF13462 Thioredoxin BAS0514 PF08331 Domain of unknown function (DUF1730) BAS0515 PF12671 Putative amidase domain BAS0516 PF00588 SpoU rRNA Methylase family BAS0517 PF03707 Bacterial signalling protein N terminal repeat BAS0517 PF00990 Diguanylate cyclase, GGDEF domain BAS0517 PF00563 EAL domain BAS0518 PF08298 PrkA AAA domain BAS0518 PF06798 PrkA serine protein kinase C-terminal domain BAS0519 PF04285 Protein of unknown function (DUF444) BAS0522 PF02028 BCCT, betaine/carnitine/choline family transporter BAS0523 PF08453 Peptidase family M9 N-terminal BAS0523 PF01752 Collagenase BAS0523 PF18496 Collagenase G catalytic helper subdomain BAS0525 PF15975 Flotillin BAS0525 PF01145 SPFH domain / Band 7 family BAS0526 PF00672 HAMP domain BAS0526 PF02743 Cache domain BAS0526 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS0527 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAS0527 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS0527 PF00989 PAS fold BAS0527 PF17203 Single cache domain 3 BAS0530 PF03600 Citrate transporter BAS0534 PF04309 Glycerol-3-phosphate responsive antiterminator BAS0535 PF17912 MalK OB fold domain BAS0535 PF00005 ABC transporter BAS0536 PF00528 Binding-protein-dependent transport system inner membrane component BAS0537 PF00528 Binding-protein-dependent transport system inner membrane component BAS0538 PF13416 Bacterial extracellular solute-binding protein BAS0539 PF00149 Calcineurin-like phosphoesterase BAS0540 PF00072 Response regulator receiver domain BAS0540 PF00486 Transcriptional regulatory protein, C terminal BAS0541 PF00512 His Kinase A (phospho-acceptor) domain BAS0541 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS0543 PF13529 Peptidase_C39 like family BAS0544 PF02743 Cache domain BAS0544 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS0544 PF00672 HAMP domain BAS0545 PF00989 PAS fold BAS0545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS0545 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAS0545 PF17203 Single cache domain 3 BAS0546 PF00072 Response regulator receiver domain BAS0547 PF03390 2-hydroxycarboxylate transporter family BAS0548 PF00390 Malic enzyme, N-terminal domain BAS0548 PF03949 Malic enzyme, NAD binding domain BAS0550 PF00892 EamA-like transporter family BAS0551 PF00392 Bacterial regulatory proteins, gntR family BAS0551 PF00155 Aminotransferase class I and II BAS0553 PF18698 Histidine kinase sensor domain BAS0553 PF00672 HAMP domain BAS0553 PF00989 PAS fold BAS0553 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS0553 PF00512 His Kinase A (phospho-acceptor) domain BAS0554 PF00072 Response regulator receiver domain BAS0554 PF00486 Transcriptional regulatory protein, C terminal BAS0555 PF13508 Acetyltransferase (GNAT) domain BAS0555 PF00583 Acetyltransferase (GNAT) family BAS0556 PF02634 FdhD/NarQ family BAS0557 PF00037 4Fe-4S binding domain BAS0557 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAS0557 PF01568 Molydopterin dinucleotide binding domain BAS0557 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAS0557 PF00384 Molybdopterin oxidoreductase BAS0561 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BAS0561 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BAS0562 PF13520 Amino acid permease BAS0563 PF01022 Bacterial regulatory protein, arsR family BAS0564 PF00403 Heavy-metal-associated domain BAS0565 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BAS0565 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BAS0565 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BAS0567 PF02868 Thermolysin metallopeptidase, alpha-helical domain BAS0567 PF01447 Thermolysin metallopeptidase, catalytic domain BAS0567 PF03413 Peptidase propeptide and YPEB domain BAS0567 PF07504 Fungalysin/Thermolysin Propeptide Motif BAS0571 PF04294 VanW like protein BAS0572 PF03816 Cell envelope-related transcriptional attenuator domain BAS0573 PF07662 Na+ dependent nucleoside transporter C-terminus BAS0573 PF01773 Na+ dependent nucleoside transporter N-terminus BAS0574 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS0575 PF00571 CBS domain BAS0575 PF03471 Transporter associated domain BAS0575 PF01595 Cyclin M transmembrane N-terminal domain BAS0576 PF00206 Lyase BAS0576 PF10415 Fumarase C C-terminus BAS0577 PF02652 L-lactate permease BAS0578 PF01022 Bacterial regulatory protein, arsR family BAS0579 PF08141 Small acid-soluble spore protein H family BAS0580 PF00854 POT family BAS0581 PF01497 Periplasmic binding protein BAS0582 PF01032 FecCD transport family BAS0583 PF01032 FecCD transport family BAS0584 PF00005 ABC transporter BAS0585 PF08241 Methyltransferase domain BAS0586 PF00155 Aminotransferase class I and II BAS0589 PF00293 NUDIX domain BAS0589 PF13344 Haloacid dehalogenase-like hydrolase BAS0590 PF00092 von Willebrand factor type A domain BAS0591 PF07728 AAA domain (dynein-related subfamily) BAS0592 PF13396 Phospholipase_D-nuclease N-terminal BAS0592 PF13091 PLD-like domain BAS0595 PF00563 EAL domain BAS0595 PF03707 Bacterial signalling protein N terminal repeat BAS0595 PF00990 Diguanylate cyclase, GGDEF domain BAS0596 PF13520 Amino acid permease BAS0597 PF07702 UTRA domain BAS0597 PF00392 Bacterial regulatory proteins, gntR family BAS0598 PF00367 phosphotransferase system, EIIB BAS0598 PF02378 Phosphotransferase system, EIIC BAS0599 PF16657 Maltogenic Amylase, C-terminal domain BAS0599 PF00128 Alpha amylase, catalytic domain BAS0602 PF03323 Bacillus/Clostridium GerA spore germination protein BAS0604 PF01636 Phosphotransferase enzyme family BAS0605 PF01235 Sodium:alanine symporter family BAS0606 PF00005 ABC transporter BAS0607 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAS0608 PF00528 Binding-protein-dependent transport system inner membrane component BAS0609 PF00528 Binding-protein-dependent transport system inner membrane component BAS0610 PF00324 Amino acid permease BAS0615 PF13280 WYL domain BAS0615 PF08279 HTH domain BAS0616 PF01872 RibD C-terminal domain BAS0617 PF00672 HAMP domain BAS0617 PF00989 PAS fold BAS0617 PF00512 His Kinase A (phospho-acceptor) domain BAS0617 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS0617 PF18698 Histidine kinase sensor domain BAS0618 PF00486 Transcriptional regulatory protein, C terminal BAS0618 PF00072 Response regulator receiver domain BAS0621 PF01740 STAS domain BAS0621 PF00916 Sulfate permease family BAS0622 PF00582 Universal stress protein family BAS0623 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS0624 PF00528 Binding-protein-dependent transport system inner membrane component BAS0625 PF00528 Binding-protein-dependent transport system inner membrane component BAS0626 PF00005 ABC transporter BAS0626 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS0627 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS0627 PF00005 ABC transporter BAS0628 PF07690 Major Facilitator Superfamily BAS0629 PF01047 MarR family BAS0630 PF07690 Major Facilitator Superfamily BAS0631 PF00356 Bacterial regulatory proteins, lacI family BAS0632 PF00294 pfkB family carbohydrate kinase BAS0633 PF05025 RbsD / FucU transport protein family BAS0634 PF00005 ABC transporter BAS0635 PF02653 Branched-chain amino acid transport system / permease component BAS0636 PF13407 Periplasmic binding protein domain BAS0637 PF00923 Transaldolase/Fructose-6-phosphate aldolase BAS0638 PF05547 Immune inhibitor A peptidase M6 BAS0641 PF08240 Alcohol dehydrogenase GroES-like domain BAS0641 PF00107 Zinc-binding dehydrogenase BAS0643 PF00882 Zinc dependent phospholipase C BAS0644 PF03372 Endonuclease/Exonuclease/phosphatase family BAS0649 PF02673 Bacitracin resistance protein BacA BAS0650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS0650 PF00672 HAMP domain BAS0650 PF02743 Cache domain BAS0651 PF01476 LysM domain BAS0651 PF06725 3D domain BAS0652 PF01381 Helix-turn-helix BAS0654 PF04203 Sortase domain BAS0655 PF00854 POT family BAS0656 PF05525 Branched-chain amino acid transport protein BAS0659 PF00324 Amino acid permease BAS0660 PF00860 Permease family BAS0665 PF00999 Sodium/hydrogen exchanger family BAS0665 PF02080 TrkA-C domain BAS0665 PF02254 TrkA-N domain BAS0667 PF00510 Cytochrome c oxidase subunit III BAS0668 PF00115 Cytochrome C and Quinol oxidase polypeptide I BAS0669 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BAS0671 PF13529 Peptidase_C39 like family BAS0672 PF01546 Peptidase family M20/M25/M40 BAS0672 PF07687 Peptidase dimerisation domain BAS0673 PF11755 Protein of unknown function (DUF3311) BAS0674 PF00474 Sodium:solute symporter family BAS0675 PF03323 Bacillus/Clostridium GerA spore germination protein BAS0676 PF03845 Spore germination protein BAS0677 PF05504 Spore germination B3/ GerAC like, C-terminal BAS0678 PF07664 Ferrous iron transport protein B C terminus BAS0678 PF17910 FeoB cytosolic helical domain BAS0678 PF02421 Ferrous iron transport protein B BAS0678 PF07670 Nucleoside recognition BAS0679 PF07664 Ferrous iron transport protein B C terminus BAS0679 PF02421 Ferrous iron transport protein B BAS0679 PF07670 Nucleoside recognition BAS0679 PF17910 FeoB cytosolic helical domain BAS0680 PF07664 Ferrous iron transport protein B C terminus BAS0680 PF04023 FeoA domain BAS0680 PF02421 Ferrous iron transport protein B BAS0680 PF17910 FeoB cytosolic helical domain BAS0680 PF07670 Nucleoside recognition BAS0681 PF12849 PBP superfamily domain BAS0682 PF00528 Binding-protein-dependent transport system inner membrane component BAS0683 PF00528 Binding-protein-dependent transport system inner membrane component BAS0685 PF00873 AcrB/AcrD/AcrF family BAS0687 PF00571 CBS domain BAS0690 PF00246 Zinc carboxypeptidase BAS0690 PF08239 Bacterial SH3 domain BAS0691 PF03070 TENA/THI-4/PQQC family BAS0692 PF00005 ABC transporter BAS0693 PF00528 Binding-protein-dependent transport system inner membrane component BAS0694 PF09084 NMT1/THI5 like BAS0695 PF02581 Thiamine monophosphate synthase BAS0696 PF01266 FAD dependent oxidoreductase BAS0697 PF02597 ThiS family BAS0698 PF05690 Thiazole biosynthesis protein ThiG BAS0699 PF00899 ThiF family BAS0700 PF08543 Phosphomethylpyrimidine kinase BAS0703 PF03814 Potassium-transporting ATPase A subunit BAS0705 PF02669 K+-transporting ATPase, c chain BAS0706 PF02702 Osmosensitive K+ channel His kinase sensor domain BAS0707 PF07690 Major Facilitator Superfamily BAS0708 PF01047 MarR family BAS0711 PF00860 Permease family BAS0716 PF00294 pfkB family carbohydrate kinase BAS0717 PF00251 Glycosyl hydrolases family 32 N-terminal domain BAS0717 PF08244 Glycosyl hydrolases family 32 C terminal BAS0718 PF00367 phosphotransferase system, EIIB BAS0718 PF02378 Phosphotransferase system, EIIC BAS0719 PF00356 Bacterial regulatory proteins, lacI family BAS0719 PF13407 Periplasmic binding protein domain BAS0721 PF00085 Thioredoxin BAS0722 PF02600 Disulfide bond formation protein DsbB BAS0723 PF14148 YhdB-like protein BAS0727 PF03323 Bacillus/Clostridium GerA spore germination protein BAS0730 PF00881 Nitroreductase family BAS0731 PF04293 SpoVR like protein BAS0736 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS0736 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAS0737 PF02583 Metal-sensitive transcriptional repressor BAS0738 PF01206 Sulfurtransferase TusA BAS0738 PF00581 Rhodanese-like domain BAS0739 PF00581 Rhodanese-like domain BAS0739 PF00753 Metallo-beta-lactamase superfamily BAS0740 PF01206 Sulfurtransferase TusA BAS0741 PF00581 Rhodanese-like domain BAS0743 PF13686 DsrE/DsrF/DrsH-like family BAS0744 PF01925 Sulfite exporter TauE/SafE BAS0746 PF03816 Cell envelope-related transcriptional attenuator domain BAS0747 PF00107 Zinc-binding dehydrogenase BAS0747 PF08240 Alcohol dehydrogenase GroES-like domain BAS0748 PF02690 Na+/Pi-cotransporter BAS0749 PF07690 Major Facilitator Superfamily BAS0751 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAS0751 PF00874 PRD domain BAS0751 PF05043 Mga helix-turn-helix domain BAS0751 PF08279 HTH domain BAS0752 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAS0753 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAS0754 PF02378 Phosphotransferase system, EIIC BAS0757 PF06725 3D domain BAS0757 PF01476 LysM domain BAS0758 PF12704 MacB-like periplasmic core domain BAS0758 PF02687 FtsX-like permease family BAS0759 PF00005 ABC transporter BAS0761 PF09529 Integral membrane protein (intg_mem_TP0381) BAS0765 PF05525 Branched-chain amino acid transport protein BAS0766 PF05067 Manganese containing catalase BAS0767 PF12652 CotJB protein BAS0768 PF11007 Spore coat associated protein JA (CotJA) BAS0771 PF02735 Ku70/Ku80 beta-barrel domain BAS0773 PF09335 SNARE associated Golgi protein BAS0779 PF13520 Amino acid permease BAS0780 PF00999 Sodium/hydrogen exchanger family BAS0782 PF01380 SIS domain BAS0782 PF01418 Helix-turn-helix domain, rpiR family BAS0783 PF01380 SIS domain BAS0784 PF00367 phosphotransferase system, EIIB BAS0784 PF02378 Phosphotransferase system, EIIC BAS0786 PF07681 DoxX BAS0789 PF00892 EamA-like transporter family BAS0790 PF01037 Lrp/AsnC ligand binding domain BAS0792 PF00893 Small Multidrug Resistance protein BAS0793 PF00893 Small Multidrug Resistance protein BAS0794 PF17934 Tetracyclin repressor-like, C-terminal domain BAS0794 PF00440 Bacterial regulatory proteins, tetR family BAS0795 PF07690 Major Facilitator Superfamily BAS0796 PF01638 HxlR-like helix-turn-helix BAS0798 PF02525 Flavodoxin-like fold BAS0799 PF12793 Sugar transport-related sRNA regulator N-term BAS0799 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS0800 PF07690 Major Facilitator Superfamily BAS0802 PF01965 DJ-1/PfpI family BAS0803 PF18011 C-terminal domain found in long catalases BAS0803 PF06628 Catalase-related immune-responsive BAS0803 PF00199 Catalase BAS0805 PF13520 Amino acid permease BAS0806 PF01177 Asp/Glu/Hydantoin racemase BAS0808 PF00171 Aldehyde dehydrogenase family BAS0809 PF00664 ABC transporter transmembrane region BAS0809 PF00005 ABC transporter BAS0812 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAS0813 PF00528 Binding-protein-dependent transport system inner membrane component BAS0814 PF00005 ABC transporter BAS0815 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAS0817 PF14398 YheC/D like ATP-grasp BAS0819 PF04286 Protein of unknown function (DUF445) BAS0820 PF06133 Control of competence regulator ComK, YlbF/YmcA BAS0823 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAS0823 PF00205 Thiamine pyrophosphate enzyme, central domain BAS0823 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAS0824 PF03306 Alpha-acetolactate decarboxylase BAS0826 PF02245 Methylpurine-DNA glycosylase (MPG) BAS0831 PF04055 Radical SAM superfamily BAS0832 PF13193 AMP-binding enzyme C-terminal domain BAS0832 PF00501 AMP-binding enzyme BAS0834 PF00916 Sulfate permease family BAS0834 PF01740 STAS domain BAS0838 PF01043 SecA preprotein cross-linking domain BAS0838 PF07517 SecA DEAD-like domain BAS0838 PF07516 SecA Wing and Scaffold domain BAS0839 PF01943 Polysaccharide biosynthesis protein BAS0839 PF14667 Polysaccharide biosynthesis C-terminal domain BAS0841 PF00395 S-layer homology domain BAS0841 PF13205 Bacterial Ig-like domain BAS0841 PF02368 Bacterial Ig-like domain (group 2) BAS0842 PF00395 S-layer homology domain BAS0844 PF03062 MBOAT, membrane-bound O-acyltransferase family BAS0845 PF03062 MBOAT, membrane-bound O-acyltransferase family BAS0848 PF00378 Enoyl-CoA hydratase/isomerase BAS0850 PF05343 M42 glutamyl aminopeptidase BAS0851 PF01520 N-acetylmuramoyl-L-alanine amidase BAS0851 PF00395 S-layer homology domain BAS0853 PF05544 Proline racemase BAS0854 PF02423 Ornithine cyclodeaminase/mu-crystallin family BAS0855 PF18593 CdiI immunity protein BAS0858 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS0859 PF00528 Binding-protein-dependent transport system inner membrane component BAS0860 PF00528 Binding-protein-dependent transport system inner membrane component BAS0860 PF12911 N-terminal TM domain of oligopeptide transport permease C BAS0863 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS0863 PF00005 ABC transporter BAS0868 PF00083 Sugar (and other) transporter BAS0869 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAS0869 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS0870 PF08279 HTH domain BAS0870 PF00072 Response regulator receiver domain BAS0870 PF12431 Transcriptional regulator BAS0871 PF03401 Tripartite tricarboxylate transporter family receptor BAS0872 PF02342 TerD domain BAS0877 PF06445 GyrI-like small molecule binding domain BAS0877 PF13411 MerR HTH family regulatory protein BAS0880 PF00772 DnaB-like helicase N terminal domain BAS0880 PF03796 DnaB-like helicase C terminal domain BAS0886 PF01925 Sulfite exporter TauE/SafE BAS0888 PF07690 Major Facilitator Superfamily BAS0896 PF07993 Male sterility protein BAS0896 PF00550 Phosphopantetheine attachment site BAS0897 PF18665 Tetracyclin repressor-like, C-terminal domain BAS0897 PF00440 Bacterial regulatory proteins, tetR family BAS0901 PF01066 CDP-alcohol phosphatidyltransferase BAS0905 PF02733 Dak1 domain BAS0907 PF02733 Dak1 domain BAS0908 PF02525 Flavodoxin-like fold BAS0909 PF02082 Transcriptional regulator BAS0914 PF01966 HD domain BAS0914 PF00672 HAMP domain BAS0916 PF00395 S-layer homology domain BAS0922 PF11181 Heat induced stress protein YflT BAS0923 PF05532 CsbD-like BAS0926 PF01740 STAS domain BAS0927 PF13581 Histidine kinase-like ATPase domain BAS0928 PF04542 Sigma-70 region 2 BAS0928 PF04539 Sigma-70 region 3 BAS0928 PF04545 Sigma-70, region 4 BAS0930 PF13426 PAS domain BAS0930 PF07228 Stage II sporulation protein E (SpoIIE) BAS0931 PF03705 CheR methyltransferase, all-alpha domain BAS0931 PF01739 CheR methyltransferase, SAM binding domain BAS0932 PF01627 Hpt domain BAS0932 PF00072 Response regulator receiver domain BAS0932 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS0932 PF00512 His Kinase A (phospho-acceptor) domain BAS0932 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAS0936 PF01906 Putative heavy-metal-binding BAS0939 PF08240 Alcohol dehydrogenase GroES-like domain BAS0939 PF00107 Zinc-binding dehydrogenase BAS0941 PF11121 Protein of unknown function (DUF2639) BAS0943 PF00149 Calcineurin-like phosphoesterase BAS0944 PF13514 AAA domain BAS0945 PF07282 Putative transposase DNA-binding domain BAS0945 PF01385 Probable transposase BAS0945 PF12323 Helix-turn-helix domain BAS0947 PF01966 HD domain BAS0947 PF01336 OB-fold nucleic acid binding domain BAS0948 PF00440 Bacterial regulatory proteins, tetR family BAS0949 PF07690 Major Facilitator Superfamily BAS0950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS0951 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS0952 PF18801 response regulator aspartate phosphatase H, N terminal BAS0953 PF08386 TAP-like protein BAS0953 PF00561 alpha/beta hydrolase fold BAS0958 PF04309 Glycerol-3-phosphate responsive antiterminator BAS0959 PF00230 Major intrinsic protein BAS0960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAS0960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAS0961 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BAS0961 PF01266 FAD dependent oxidoreductase BAS0964 PF04542 Sigma-70 region 2 BAS0964 PF08281 Sigma-70, region 4 BAS0970 PF07690 Major Facilitator Superfamily BAS0971 PF07690 Major Facilitator Superfamily BAS0973 PF13538 UvrD-like helicase C-terminal domain BAS0976 PF01047 MarR family BAS0977 PF12732 YtxH-like protein BAS0978 PF01230 HIT domain BAS0979 PF00005 ABC transporter BAS0980 PF05975 Bacterial ABC transporter protein EcsB BAS0981 PF12787 EcsC protein family BAS0982 PF17934 Tetracyclin repressor-like, C-terminal domain BAS0982 PF00440 Bacterial regulatory proteins, tetR family BAS0984 PF03703 Bacterial PH domain BAS0995 PF03703 Bacterial PH domain BAS0996 PF03703 Bacterial PH domain BAS0997 PF03992 Antibiotic biosynthesis monooxygenase BAS0998 PF00912 Transglycosylase BAS0998 PF00905 Penicillin binding protein transpeptidase domain BAS0999 PF01208 Uroporphyrinogen decarboxylase (URO-D) BAS1000 PF00762 Ferrochelatase BAS1001 PF01593 Flavin containing amine oxidoreductase BAS1006 PF03965 Penicillinase repressor BAS1008 PF17932 Tetracyclin repressor-like, C-terminal domain BAS1008 PF00440 Bacterial regulatory proteins, tetR family BAS1016 PF12706 Beta-lactamase superfamily domain BAS1017 PF03099 Biotin/lipoate A/B protein ligase family BAS1017 PF10437 Bacterial lipoate protein ligase C-terminus BAS1019 PF13193 AMP-binding enzyme C-terminal domain BAS1019 PF00501 AMP-binding enzyme BAS1021 PF01520 N-acetylmuramoyl-L-alanine amidase BAS1021 PF00395 S-layer homology domain BAS1022 PF05593 RHS Repeat BAS1025 PF05593 RHS Repeat BAS1030 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BAS1033 PF01966 HD domain BAS1035 PF04542 Sigma-70 region 2 BAS1035 PF08281 Sigma-70, region 4 BAS1036 PF12833 Helix-turn-helix domain BAS1036 PF06445 GyrI-like small molecule binding domain BAS1039 PF00512 His Kinase A (phospho-acceptor) domain BAS1039 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1040 PF00072 Response regulator receiver domain BAS1040 PF00486 Transcriptional regulatory protein, C terminal BAS1045 PF01435 Peptidase family M48 BAS1045 PF16491 CAAX prenyl protease N-terminal, five membrane helices BAS1046 PF00672 HAMP domain BAS1046 PF02743 Cache domain BAS1046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS1047 PF00892 EamA-like transporter family BAS1048 PF00395 S-layer homology domain BAS1048 PF00150 Cellulase (glycosyl hydrolase family 5) BAS1048 PF03424 Carbohydrate binding domain (family 17/28) BAS1050 PF00395 S-layer homology domain BAS1051 PF01274 Malate synthase BAS1052 PF00463 Isocitrate lyase family BAS1054 PF00313 'Cold-shock' DNA-binding domain BAS1057 PF06338 ComK protein BAS1058 PF09335 SNARE associated Golgi protein BAS1059 PF10502 Signal peptidase, peptidase S26 BAS1060 PF13361 UvrD-like helicase C-terminal domain BAS1060 PF12705 PD-(D/E)XK nuclease superfamily BAS1061 PF13361 UvrD-like helicase C-terminal domain BAS1061 PF00580 UvrD/REP helicase N-terminal domain BAS1061 PF12705 PD-(D/E)XK nuclease superfamily BAS1063 PF10676 Spore germination protein gerPA/gerPF BAS1064 PF10970 Spore germination protein GerPE BAS1066 PF10737 Spore germination protein GerPC BAS1067 PF10803 Spore germination GerPB BAS1068 PF10676 Spore germination protein gerPA/gerPF BAS1069 PF01557 Fumarylacetoacetate (FAA) hydrolase family BAS1071 PF00202 Aminotransferase class-III BAS1072 PF07457 Protein of unknown function (DUF1516) BAS1074 PF00733 Asparagine synthase BAS1074 PF13537 Glutamine amidotransferase domain BAS1075 PF00762 Ferrochelatase BAS1076 PF06628 Catalase-related immune-responsive BAS1076 PF00199 Catalase BAS1078 PF00909 Ammonium Transporter Family BAS1079 PF00128 Alpha amylase, catalytic domain BAS1081 PF04461 Protein of unknown function (DUF520) BAS1082 PF17783 CvfB-like winged helix domain BAS1082 PF13509 S1 domain BAS1084 PF00639 PPIC-type PPIASE domain BAS1085 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS1085 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAS1086 PF12758 Protein of unknown function (DUF3813) BAS1089 PF14168 YjzC-like protein BAS1090 PF17871 AAA lid domain BAS1090 PF10431 C-terminal, D2-small domain, of ClpB protein BAS1090 PF00004 ATPase family associated with various cellular activities (AAA) BAS1090 PF07724 AAA domain (Cdc48 subfamily) BAS1090 PF02861 Clp amino terminal domain, pathogenicity island component BAS1094 PF10815 ComZ BAS1095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAS1095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAS1096 PF02801 Beta-ketoacyl synthase, C-terminal domain BAS1096 PF00109 Beta-ketoacyl synthase, N-terminal domain BAS1097 PF10026 Predicted Zn-dependent protease (DUF2268) BAS1098 PF12227 Protein of unknown function (DUF3603) BAS1099 PF00579 tRNA synthetases class I (W and Y) BAS1101 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS1102 PF00528 Binding-protein-dependent transport system inner membrane component BAS1103 PF12911 N-terminal TM domain of oligopeptide transport permease C BAS1103 PF00528 Binding-protein-dependent transport system inner membrane component BAS1104 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS1104 PF00005 ABC transporter BAS1105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS1105 PF00005 ABC transporter BAS1106 PF01554 MatE BAS1107 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS1109 PF03960 ArsC family BAS1110 PF03741 Integral membrane protein TerC family BAS1111 PF05389 Negative regulator of genetic competence (MecA) BAS1112 PF13396 Phospholipase_D-nuclease N-terminal BAS1112 PF13091 PLD-like domain BAS1114 PF01432 Peptidase family M3 BAS1114 PF08439 Oligopeptidase F BAS1116 PF01152 Bacterial-like globin BAS1117 PF01928 CYTH domain BAS1119 PF04607 Region found in RelA / SpoT proteins BAS1120 PF01513 ATP-NAD kinase BAS1121 PF00849 RNA pseudouridylate synthase BAS1124 PF00149 Calcineurin-like phosphoesterase BAS1127 PF00535 Glycosyl transferase family 2 BAS1128 PF08241 Methyltransferase domain BAS1129 PF05711 Macrocin-O-methyltransferase (TylF) BAS1131 PF00535 Glycosyl transferase family 2 BAS1131 PF13181 Tetratricopeptide repeat BAS1135 PF00483 Nucleotidyl transferase BAS1136 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BAS1137 PF16363 GDP-mannose 4,6 dehydratase BAS1138 PF04321 RmlD substrate binding domain BAS1142 PF07098 Protein of unknown function (DUF1360) BAS1146 PF13361 UvrD-like helicase C-terminal domain BAS1146 PF00580 UvrD/REP helicase N-terminal domain BAS1147 PF13673 Acetyltransferase (GNAT) domain BAS1150 PF00756 Putative esterase BAS1153 PF02368 Bacterial Ig-like domain (group 2) BAS1154 PF00474 Sodium:solute symporter family BAS1156 PF04715 Anthranilate synthase component I, N terminal region BAS1156 PF00425 chorismate binding enzyme BAS1157 PF02885 Glycosyl transferase family, helical bundle domain BAS1157 PF00117 Glutamine amidotransferase class-I BAS1157 PF00591 Glycosyl transferase family, a/b domain BAS1158 PF00591 Glycosyl transferase family, a/b domain BAS1158 PF02885 Glycosyl transferase family, helical bundle domain BAS1159 PF00218 Indole-3-glycerol phosphate synthase BAS1160 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BAS1161 PF00291 Pyridoxal-phosphate dependent enzyme BAS1162 PF00290 Tryptophan synthase alpha chain BAS1165 PF02652 L-lactate permease BAS1166 PF10042 Uncharacterized conserved protein (DUF2278) BAS1170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAS1170 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS1176 PF02817 e3 binding domain BAS1176 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAS1176 PF00364 Biotin-requiring enzyme BAS1177 PF00676 Dehydrogenase E1 component BAS1177 PF02779 Transketolase, pyrimidine binding domain BAS1177 PF16870 2-oxoglutarate dehydrogenase C-terminal BAS1178 PF01381 Helix-turn-helix BAS1188 PF13649 Methyltransferase domain BAS1190 PF00768 D-alanyl-D-alanine carboxypeptidase BAS1190 PF07943 Penicillin-binding protein 5, C-terminal domain BAS1192 PF12389 Camelysin metallo-endopeptidase BAS1194 PF12389 Camelysin metallo-endopeptidase BAS1195 PF08671 Anti-repressor SinI BAS1195 PF01381 Helix-turn-helix BAS1197 PF05547 Immune inhibitor A peptidase M6 BAS1198 PF00171 Aldehyde dehydrogenase family BAS1199 PF08402 TOBE domain BAS1199 PF00005 ABC transporter BAS1200 PF00528 Binding-protein-dependent transport system inner membrane component BAS1201 PF00528 Binding-protein-dependent transport system inner membrane component BAS1202 PF13416 Bacterial extracellular solute-binding protein BAS1204 PF03176 MMPL family BAS1206 PF00849 RNA pseudouridylate synthase BAS1206 PF01479 S4 domain BAS1208 PF00188 Cysteine-rich secretory protein family BAS1209 PF02754 Cysteine-rich domain BAS1209 PF13183 4Fe-4S dicluster domain BAS1210 PF02913 FAD linked oxidases, C-terminal domain BAS1210 PF01565 FAD binding domain BAS1211 PF05651 Putative sugar diacid recognition BAS1211 PF17853 GGDEF-like domain BAS1211 PF13556 PucR C-terminal helix-turn-helix domain BAS1213 PF00486 Transcriptional regulatory protein, C terminal BAS1213 PF00072 Response regulator receiver domain BAS1214 PF18698 Histidine kinase sensor domain BAS1214 PF00512 His Kinase A (phospho-acceptor) domain BAS1214 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1214 PF00672 HAMP domain BAS1214 PF00989 PAS fold BAS1215 PF07729 FCD domain BAS1215 PF00392 Bacterial regulatory proteins, gntR family BAS1216 PF02754 Cysteine-rich domain BAS1217 PF02589 LUD domain BAS1217 PF11870 Domain of unknown function (DUF3390) BAS1217 PF13183 4Fe-4S dicluster domain BAS1218 PF02589 LUD domain BAS1219 PF06750 Bacterial Peptidase A24 N-terminal domain BAS1219 PF01478 Type IV leader peptidase family BAS1222 PF01226 Formate/nitrite transporter BAS1223 PF03741 Integral membrane protein TerC family BAS1224 PF02386 Cation transport protein BAS1225 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAS1226 PF01575 MaoC like domain BAS1231 PF00561 alpha/beta hydrolase fold BAS1232 PF01266 FAD dependent oxidoreductase BAS1233 PF02386 Cation transport protein BAS1238 PF00528 Binding-protein-dependent transport system inner membrane component BAS1239 PF13419 Haloacid dehalogenase-like hydrolase BAS1240 PF00266 Aminotransferase class-V BAS1242 PF00455 DeoR C terminal sensor domain BAS1242 PF08220 DeoR-like helix-turn-helix domain BAS1250 PF04748 Divergent polysaccharide deacetylase BAS1251 PF09388 Spo0E like sporulation regulatory protein BAS1252 PF00512 His Kinase A (phospho-acceptor) domain BAS1252 PF02743 Cache domain BAS1252 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1253 PF01047 MarR family BAS1255 PF12867 DinB superfamily BAS1256 PF13188 PAS domain BAS1256 PF13426 PAS domain BAS1256 PF00989 PAS fold BAS1256 PF00512 His Kinase A (phospho-acceptor) domain BAS1256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1257 PF06508 Queuosine biosynthesis protein QueC BAS1258 PF01242 6-pyruvoyl tetrahydropterin synthase BAS1259 PF04055 Radical SAM superfamily BAS1260 PF14489 QueF-like protein BAS1261 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BAS1266 PF07972 NrdI Flavodoxin like BAS1270 PF00268 Ribonucleotide reductase, small chain BAS1271 PF00392 Bacterial regulatory proteins, gntR family BAS1272 PF00005 ABC transporter BAS1274 PF00005 ABC transporter BAS1278 PF01037 Lrp/AsnC ligand binding domain BAS1280 PF00857 Isochorismatase family BAS1282 PF02016 LD-carboxypeptidase N-terminal domain BAS1282 PF17676 LD-carboxypeptidase C-terminal domain BAS1283 PF03060 Nitronate monooxygenase BAS1284 PF04914 DltD protein BAS1285 PF00550 Phosphopantetheine attachment site BAS1286 PF03062 MBOAT, membrane-bound O-acyltransferase family BAS1287 PF00501 AMP-binding enzyme BAS1287 PF13193 AMP-binding enzyme C-terminal domain BAS1289 PF01546 Peptidase family M20/M25/M40 BAS1289 PF07687 Peptidase dimerisation domain BAS1290 PF00258 Flavodoxin BAS1292 PF01636 Phosphotransferase enzyme family BAS1295 PF01554 MatE BAS1296 PF02673 Bacitracin resistance protein BacA BAS1299 PF01047 MarR family BAS1300 PF00375 Sodium:dicarboxylate symporter family BAS1301 PF02386 Cation transport protein BAS1303 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BAS1304 PF03698 Uncharacterised protein family (UPF0180) BAS1307 PF01063 Amino-transferase class IV BAS1308 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAS1308 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAS1308 PF00205 Thiamine pyrophosphate enzyme, central domain BAS1309 PF10369 Small subunit of acetolactate synthase BAS1309 PF01842 ACT domain BAS1310 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BAS1310 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BAS1311 PF00682 HMGL-like BAS1311 PF08502 LeuA allosteric (dimerisation) domain BAS1312 PF00180 Isocitrate/isopropylmalate dehydrogenase BAS1313 PF00330 Aconitase family (aconitate hydratase) BAS1314 PF00694 Aconitase C-terminal domain BAS1315 PF13393 Histidyl-tRNA synthetase BAS1316 PF01634 ATP phosphoribosyltransferase BAS1317 PF00815 Histidinol dehydrogenase BAS1318 PF00475 Imidazoleglycerol-phosphate dehydratase BAS1319 PF00117 Glutamine amidotransferase class-I BAS1320 PF00977 Histidine biosynthesis protein BAS1321 PF00977 Histidine biosynthesis protein BAS1322 PF01502 Phosphoribosyl-AMP cyclohydrolase BAS1323 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BAS1324 PF02811 PHP domain BAS1325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAS1325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAS1326 PF01066 CDP-alcohol phosphatidyltransferase BAS1327 PF00884 Sulfatase BAS1329 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BAS1329 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BAS1330 PF01507 Phosphoadenosine phosphosulfate reductase family BAS1331 PF01747 ATP-sulfurylase BAS1331 PF14306 PUA-like domain BAS1333 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BAS1333 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BAS1335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAS1336 PF01903 CbiX BAS1338 PF00209 Sodium:neurotransmitter symporter family BAS1343 PF03553 Na+/H+ antiporter family BAS1346 PF09922 Cell wall-active antibiotics response 4TMS YvqF BAS1347 PF00672 HAMP domain BAS1347 PF07730 Histidine kinase BAS1347 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1348 PF00072 Response regulator receiver domain BAS1348 PF00196 Bacterial regulatory proteins, luxR family BAS1350 PF05525 Branched-chain amino acid transport protein BAS1352 PF08241 Methyltransferase domain BAS1357 PF00175 Oxidoreductase NAD-binding domain BAS1357 PF00042 Globin BAS1357 PF00970 Oxidoreductase FAD-binding domain BAS1360 PF01925 Sulfite exporter TauE/SafE BAS1361 PF01384 Phosphate transporter family BAS1362 PF01865 Protein of unknown function DUF47 BAS1363 PF00912 Transglycosylase BAS1363 PF00905 Penicillin binding protein transpeptidase domain BAS1367 PF00989 PAS fold BAS1367 PF00512 His Kinase A (phospho-acceptor) domain BAS1367 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1368 PF01904 Protein of unknown function DUF72 BAS1370 PF00589 Phage integrase family BAS1371 PF00512 His Kinase A (phospho-acceptor) domain BAS1371 PF00989 PAS fold BAS1371 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1371 PF16736 Single Cache-like BAS1372 PF01048 Phosphorylase superfamily BAS1375 PF03706 Lysylphosphatidylglycerol synthase TM region BAS1375 PF09924 Uncharacterised conserved protein (DUF2156) BAS1378 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAS1378 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAS1379 PF07943 Penicillin-binding protein 5, C-terminal domain BAS1379 PF00768 D-alanyl-D-alanine carboxypeptidase BAS1380 PF07670 Nucleoside recognition BAS1381 PF07670 Nucleoside recognition BAS1382 PF01479 S4 domain BAS1382 PF00849 RNA pseudouridylate synthase BAS1383 PF00578 AhpC/TSA family BAS1384 PF05140 ResB-like family BAS1385 PF01578 Cytochrome C assembly protein BAS1386 PF00072 Response regulator receiver domain BAS1386 PF00486 Transcriptional regulatory protein, C terminal BAS1387 PF18698 Histidine kinase sensor domain BAS1387 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1387 PF00672 HAMP domain BAS1387 PF00989 PAS fold BAS1387 PF00512 His Kinase A (phospho-acceptor) domain BAS1388 PF01923 Cobalamin adenosyltransferase BAS1391 PF12822 ECF transporter, substrate-specific component BAS1393 PF14493 Helix-turn-helix domain BAS1394 PF00271 Helicase conserved C-terminal domain BAS1394 PF00270 DEAD/DEAH box helicase BAS1395 PF02517 CPBP intramembrane metalloprotease BAS1399 PF13411 MerR HTH family regulatory protein BAS1399 PF02607 B12 binding domain BAS1399 PF02310 B12 binding domain BAS1400 PF05389 Negative regulator of genetic competence (MecA) BAS1401 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BAS1401 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAS1406 PF00710 Asparaginase, N-terminal BAS1406 PF17763 Glutaminase/Asparaginase C-terminal domain BAS1407 PF02224 Cytidylate kinase BAS1408 PF00575 S1 RNA binding domain BAS1409 PF01070 FMN-dependent dehydrogenase BAS1410 PF14140 YpzI-like protein BAS1412 PF14045 YIEGIA protein BAS1414 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BAS1414 PF01926 50S ribosome-binding GTPase BAS1415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BAS1415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BAS1417 PF10966 Protein of unknown function (DUF2768) BAS1419 PF09547 Stage IV sporulation protein A (spore_IV_A) BAS1420 PF00216 Bacterial DNA-binding protein BAS1421 PF01227 GTP cyclohydrolase I BAS1422 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BAS1423 PF01209 ubiE/COQ5 methyltransferase family BAS1424 PF00348 Polyprenyl synthetase BAS1425 PF00334 Nucleoside diphosphate kinase BAS1426 PF01264 Chorismate synthase BAS1427 PF01761 3-dehydroquinate synthase BAS1428 PF00155 Aminotransferase class I and II BAS1430 PF08858 IDEAL domain BAS1430 PF08864 UPF0302 domain BAS1431 PF10673 Protein of unknown function (DUF2487) BAS1432 PF00355 Rieske [2Fe-2S] domain BAS1433 PF00033 Cytochrome b/b6/petB BAS1434 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAS1434 PF00032 Cytochrome b(C-terminal)/b6/petD BAS1435 PF07187 Protein of unknown function (DUF1405) BAS1437 PF09577 Sporulation protein YpjB (SpoYpjB) BAS1438 PF04298 Putative neutral zinc metallopeptidase BAS1440 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS1440 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAS1441 PF03819 MazG nucleotide pyrophosphohydrolase domain BAS1442 PF05173 Dihydrodipicolinate reductase, C-terminus BAS1442 PF01113 Dihydrodipicolinate reductase, N-terminus BAS1443 PF02142 MGS-like domain BAS1444 PF02585 GlcNAc-PI de-N-acetylase BAS1445 PF13439 Glycosyltransferase Family 4 BAS1445 PF00534 Glycosyl transferases group 1 BAS1446 PF13735 tRNA nucleotidyltransferase domain 2 putative BAS1446 PF12627 Probable RNA and SrmB- binding site of polymerase A BAS1446 PF01743 Poly A polymerase head domain BAS1447 PF08279 HTH domain BAS1447 PF03099 Biotin/lipoate A/B protein ligase family BAS1447 PF02237 Biotin protein ligase C terminal domain BAS1449 PF02548 Ketopantoate hydroxymethyltransferase BAS1450 PF02569 Pantoate-beta-alanine ligase BAS1451 PF02261 Aspartate decarboxylase BAS1452 PF04851 Type III restriction enzyme, res subunit BAS1452 PF00929 Exonuclease BAS1452 PF13307 Helicase C-terminal domain BAS1454 PF00155 Aminotransferase class I and II BAS1455 PF07261 Replication initiation and membrane attachment BAS1456 PF00730 HhH-GPD superfamily base excision DNA repair protein BAS1456 PF00633 Helix-hairpin-helix motif BAS1456 PF10576 Iron-sulfur binding domain of endonuclease III BAS1458 PF00912 Transglycosylase BAS1458 PF00905 Penicillin binding protein transpeptidase domain BAS1459 PF03838 Recombination protein U BAS1460 PF10720 Protein of unknown function (DUF2515) BAS1466 PF06908 YspA SLOG family BAS1467 PF05103 DivIVA protein BAS1468 PF01170 Putative RNA methylase family UPF0020 BAS1468 PF02926 THUMP domain BAS1470 PF13307 Helicase C-terminal domain BAS1471 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BAS1473 PF01636 Phosphotransferase enzyme family BAS1474 PF00557 Metallopeptidase family M24 BAS1475 PF00156 Phosphoribosyl transferase domain BAS1476 PF00860 Permease family BAS1477 PF04235 Protein of unknown function (DUF418) BAS1479 PF00350 Dynamin family BAS1480 PF00583 Acetyltransferase (GNAT) family BAS1482 PF10752 Protein of unknown function (DUF2533) BAS1483 PF00581 Rhodanese-like domain BAS1486 PF03738 Glutathionylspermidine synthase preATP-grasp BAS1488 PF00689 Cation transporting ATPase, C-terminus BAS1488 PF00690 Cation transporter/ATPase, N-terminus BAS1489 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAS1489 PF01367 5'-3' exonuclease, C-terminal SAM fold BAS1494 PF02397 Bacterial sugar transferase BAS1497 PF00535 Glycosyl transferase family 2 BAS1498 PF13439 Glycosyltransferase Family 4 BAS1498 PF00534 Glycosyl transferases group 1 BAS1503 PF18014 Acetyltransferase (GNAT) domain BAS1503 PF13673 Acetyltransferase (GNAT) domain BAS1507 PF13456 Reverse transcriptase-like BAS1508 PF01263 Aldose 1-epimerase BAS1512 PF00313 'Cold-shock' DNA-binding domain BAS1514 PF01810 LysE type translocator BAS1517 PF04341 Protein of unknown function, DUF485 BAS1518 PF00474 Sodium:solute symporter family BAS1519 PF00202 Aminotransferase class-III BAS1521 PF00999 Sodium/hydrogen exchanger family BAS1522 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BAS1522 PF17770 Ribonuclease J C-terminal domain BAS1522 PF00753 Metallo-beta-lactamase superfamily BAS1523 PF06445 GyrI-like small molecule binding domain BAS1523 PF13411 MerR HTH family regulatory protein BAS1525 PF04239 Protein of unknown function (DUF421) BAS1526 PF02698 DUF218 domain BAS1528 PF00881 Nitroreductase family BAS1537 PF17209 Hfq protein BAS1539 PF01618 MotA/TolQ/ExbB proton channel family BAS1540 PF13677 Membrane MotB of proton-channel complex MotA/MotB BAS1540 PF00691 OmpA family BAS1541 PF00072 Response regulator receiver domain BAS1544 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAS1544 PF04509 CheC-like family BAS1547 PF03705 CheR methyltransferase, all-alpha domain BAS1547 PF01739 CheR methyltransferase, SAM binding domain BAS1551 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAS1551 PF00460 Flagella basal body rod protein BAS1557 PF00460 Flagella basal body rod protein BAS1558 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAS1558 PF00460 Flagella basal body rod protein BAS1559 PF02049 Flagellar hook-basal body complex protein FliE BAS1560 PF01514 Secretory protein of YscJ/FliF family BAS1560 PF08345 Flagellar M-ring protein C-terminal BAS1561 PF14841 FliG middle domain BAS1561 PF14842 FliG N-terminal domain BAS1561 PF01706 FliG C-terminal domain BAS1563 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAS1563 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAS1563 PF18269 T3SS EscN ATPase C-terminal domain BAS1568 PF00460 Flagella basal body rod protein BAS1568 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAS1568 PF07559 Flagellar basal body protein FlaE BAS1573 PF12181 DNA binding domain of the motility gene repressor (MogR) BAS1574 PF00535 Glycosyl transferase family 2 BAS1578 PF13181 Tetratricopeptide repeat BAS1578 PF00535 Glycosyl transferase family 2 BAS1582 PF00700 Bacterial flagellin C-terminal helical region BAS1582 PF00669 Bacterial flagellin N-terminal helical region BAS1583 PF01464 Transglycosylase SLT domain BAS1587 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAS1587 PF04509 CheC-like family BAS1589 PF00813 FliP family BAS1590 PF01313 Bacterial export proteins, family 3 BAS1592 PF01312 FlhB HrpN YscU SpaS Family BAS1593 PF00771 FHIPEP family BAS1596 PF00460 Flagella basal body rod protein BAS1596 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAS1597 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAS1597 PF02272 DHHA1 domain BAS1597 PF01411 tRNA synthetases class II (A) BAS1601 PF17932 Tetracyclin repressor-like, C-terminal domain BAS1601 PF00440 Bacterial regulatory proteins, tetR family BAS1602 PF17329 Family of unknown function (DUF5367) BAS1605 PF03992 Antibiotic biosynthesis monooxygenase BAS1609 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS1609 PF03466 LysR substrate binding domain BAS1610 PF00005 ABC transporter BAS1610 PF08402 TOBE domain BAS1612 PF00528 Binding-protein-dependent transport system inner membrane component BAS1613 PF12706 Beta-lactamase superfamily domain BAS1613 PF00753 Metallo-beta-lactamase superfamily BAS1615 PF10787 Uncharacterised protein from bacillus cereus group BAS1617 PF07943 Penicillin-binding protein 5, C-terminal domain BAS1617 PF00768 D-alanyl-D-alanine carboxypeptidase BAS1619 PF00300 Histidine phosphatase superfamily (branch 1) BAS1625 PF13537 Glutamine amidotransferase domain BAS1625 PF00733 Asparagine synthase BAS1629 PF16916 Dimerisation domain of Zinc Transporter BAS1629 PF01545 Cation efflux family BAS1630 PF00392 Bacterial regulatory proteins, gntR family BAS1630 PF07729 FCD domain BAS1631 PF00892 EamA-like transporter family BAS1632 PF03773 Predicted permease BAS1633 PF07683 Cobalamin synthesis protein cobW C-terminal domain BAS1633 PF02492 CobW/HypB/UreG, nucleotide-binding domain BAS1635 PF00535 Glycosyl transferase family 2 BAS1636 PF03553 Na+/H+ antiporter family BAS1637 PF10415 Fumarase C C-terminus BAS1637 PF00206 Lyase BAS1643 PF03575 Peptidase family S51 BAS1647 PF02683 Cytochrome C biogenesis protein transmembrane region BAS1648 PF00578 AhpC/TSA family BAS1653 PF00291 Pyridoxal-phosphate dependent enzyme BAS1654 PF04286 Protein of unknown function (DUF445) BAS1659 PF00072 Response regulator receiver domain BAS1659 PF00196 Bacterial regulatory proteins, luxR family BAS1660 PF07730 Histidine kinase BAS1660 PF13185 GAF domain BAS1660 PF13492 GAF domain BAS1660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1661 PF00005 ABC transporter BAS1664 PF13091 PLD-like domain BAS1665 PF00696 Amino acid kinase family BAS1666 PF00375 Sodium:dicarboxylate symporter family BAS1667 PF10415 Fumarase C C-terminus BAS1667 PF00206 Lyase BAS1668 PF03949 Malic enzyme, NAD binding domain BAS1668 PF00390 Malic enzyme, N-terminal domain BAS1669 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1670 PF00072 Response regulator receiver domain BAS1670 PF08664 YcbB domain BAS1671 PF04434 SWIM zinc finger BAS1671 PF00176 SNF2 family N-terminal domain BAS1671 PF00271 Helicase conserved C-terminal domain BAS1673 PF03590 Aspartate-ammonia ligase BAS1676 PF00696 Amino acid kinase family BAS1676 PF13840 ACT domain BAS1679 PF13761 Domain of unknown function (DUF4166) BAS1680 PF14158 YndJ-like protein BAS1681 PF00293 NUDIX domain BAS1682 PF00395 S-layer homology domain BAS1682 PF02368 Bacterial Ig-like domain (group 2) BAS1682 PF13205 Bacterial Ig-like domain BAS1684 PF07690 Major Facilitator Superfamily BAS1687 PF02554 Carbon starvation protein CstA BAS1688 PF03976 Polyphosphate kinase 2 (PPK2) BAS1691 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAS1691 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAS1693 PF01926 50S ribosome-binding GTPase BAS1693 PF16360 GTP-binding GTPase Middle Region BAS1693 PF13167 GTP-binding GTPase N-terminal BAS1696 PF07690 Major Facilitator Superfamily BAS1697 PF00291 Pyridoxal-phosphate dependent enzyme BAS1700 PF01943 Polysaccharide biosynthesis protein BAS1700 PF14667 Polysaccharide biosynthesis C-terminal domain BAS1701 PF00209 Sodium:neurotransmitter symporter family BAS1702 PF03422 Carbohydrate binding module (family 6) BAS1702 PF00457 Glycosyl hydrolases family 11 BAS1702 PF01522 Polysaccharide deacetylase BAS1704 PF04239 Protein of unknown function (DUF421) BAS1707 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BAS1707 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAS1711 PF01625 Peptide methionine sulfoxide reductase BAS1713 PF01063 Amino-transferase class IV BAS1714 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAS1714 PF00205 Thiamine pyrophosphate enzyme, central domain BAS1714 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAS1715 PF10369 Small subunit of acetolactate synthase BAS1716 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BAS1716 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BAS1717 PF00920 Dehydratase family BAS1718 PF00585 C-terminal regulatory domain of Threonine dehydratase BAS1718 PF00291 Pyridoxal-phosphate dependent enzyme BAS1719 PF09587 Bacterial capsule synthesis protein PGA_cap BAS1722 PF07690 Major Facilitator Superfamily BAS1723 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BAS1725 PF00072 Response regulator receiver domain BAS1725 PF04397 LytTr DNA-binding domain BAS1726 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BAS1726 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BAS1729 PF01979 Amidohydrolase family BAS1730 PF12146 Serine aminopeptidase, S33 BAS1730 PF13026 Protein of unknown function (DUF3887) BAS1732 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS1737 PF13186 Iron-sulfur cluster-binding domain BAS1737 PF04055 Radical SAM superfamily BAS1738 PF13302 Acetyltransferase (GNAT) domain BAS1739 PF00072 Response regulator receiver domain BAS1739 PF00486 Transcriptional regulatory protein, C terminal BAS1743 PF01566 Natural resistance-associated macrophage protein BAS1744 PF17773 UPF0176 acylphosphatase like domain BAS1744 PF12368 Rhodanase C-terminal BAS1744 PF00581 Rhodanese-like domain BAS1746 PF08546 Ketopantoate reductase PanE/ApbA C terminal BAS1746 PF02558 Ketopantoate reductase PanE/ApbA BAS1750 PF05791 Bacillus haemolytic enterotoxin (HBL) BAS1751 PF05791 Bacillus haemolytic enterotoxin (HBL) BAS1753 PF04198 Putative sugar-binding domain BAS1754 PF01791 DeoC/LacD family aldolase BAS1755 PF07662 Na+ dependent nucleoside transporter C-terminus BAS1755 PF01773 Na+ dependent nucleoside transporter N-terminus BAS1756 PF00591 Glycosyl transferase family, a/b domain BAS1756 PF02885 Glycosyl transferase family, helical bundle domain BAS1756 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BAS1757 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAS1759 PF05979 Bacterial protein of unknown function (DUF896) BAS1763 PF00557 Metallopeptidase family M24 BAS1763 PF05195 Aminopeptidase P, N-terminal domain BAS1764 PF07731 Multicopper oxidase BAS1764 PF07732 Multicopper oxidase BAS1765 PF01551 Peptidase family M23 BAS1767 PF01751 Toprim domain BAS1767 PF01131 DNA topoisomerase BAS1767 PF13342 C-terminal repeat of topoisomerase BAS1767 PF01396 Topoisomerase DNA binding C4 zinc finger BAS1770 PF02525 Flavodoxin-like fold BAS1774 PF05425 Copper resistance protein D BAS1774 PF13115 YtkA-like BAS1774 PF04234 CopC domain BAS1775 PF07987 Domain of unkown function (DUF1775) BAS1777 PF00892 EamA-like transporter family BAS1778 PF03466 LysR substrate binding domain BAS1778 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS1779 PF02082 Transcriptional regulator BAS1780 PF01323 DSBA-like thioredoxin domain BAS1781 PF00881 Nitroreductase family BAS1782 PF01425 Amidase BAS1783 PF01594 AI-2E family transporter BAS1784 PF00056 lactate/malate dehydrogenase, NAD binding domain BAS1784 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAS1785 PF01593 Flavin containing amine oxidoreductase BAS1786 PF07683 Cobalamin synthesis protein cobW C-terminal domain BAS1786 PF02492 CobW/HypB/UreG, nucleotide-binding domain BAS1789 PF13193 AMP-binding enzyme C-terminal domain BAS1789 PF00501 AMP-binding enzyme BAS1790 PF01575 MaoC like domain BAS1791 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAS1791 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAS1793 PF00005 ABC transporter BAS1793 PF12399 Branched-chain amino acid ATP-binding cassette transporter BAS1794 PF00005 ABC transporter BAS1795 PF02653 Branched-chain amino acid transport system / permease component BAS1797 PF03466 LysR substrate binding domain BAS1797 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS1799 PF14552 Tautomerase enzyme BAS1801 PF01047 MarR family BAS1803 PF01654 Cytochrome bd terminal oxidase subunit I BAS1804 PF02322 Cytochrome bd terminal oxidase subunit II BAS1805 PF00005 ABC transporter BAS1805 PF00664 ABC transporter transmembrane region BAS1806 PF00005 ABC transporter BAS1806 PF00664 ABC transporter transmembrane region BAS1809 PF02016 LD-carboxypeptidase N-terminal domain BAS1809 PF17676 LD-carboxypeptidase C-terminal domain BAS1810 PF00768 D-alanyl-D-alanine carboxypeptidase BAS1810 PF07943 Penicillin-binding protein 5, C-terminal domain BAS1812 PF00877 NlpC/P60 family BAS1812 PF01476 LysM domain BAS1816 PF00072 Response regulator receiver domain BAS1816 PF00486 Transcriptional regulatory protein, C terminal BAS1817 PF00512 His Kinase A (phospho-acceptor) domain BAS1817 PF16736 Single Cache-like BAS1817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1817 PF00989 PAS fold BAS1819 PF00106 short chain dehydrogenase BAS1820 PF04439 Streptomycin adenylyltransferase BAS1821 PF01522 Polysaccharide deacetylase BAS1825 PF01842 ACT domain BAS1825 PF00742 Homoserine dehydrogenase BAS1825 PF03447 Homoserine dehydrogenase, NAD binding domain BAS1826 PF00291 Pyridoxal-phosphate dependent enzyme BAS1827 PF00288 GHMP kinases N terminal domain BAS1827 PF08544 GHMP kinases C terminal BAS1830 PF03816 Cell envelope-related transcriptional attenuator domain BAS1832 PF00072 Response regulator receiver domain BAS1832 PF00486 Transcriptional regulatory protein, C terminal BAS1833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS1833 PF00512 His Kinase A (phospho-acceptor) domain BAS1833 PF16736 Single Cache-like BAS1833 PF00989 PAS fold BAS1834 PF01522 Polysaccharide deacetylase BAS1836 PF02308 MgtC family BAS1837 PF00583 Acetyltransferase (GNAT) family BAS1838 PF04183 IucA / IucC family BAS1838 PF06276 Ferric iron reductase FhuF-like transporter BAS1839 PF06276 Ferric iron reductase FhuF-like transporter BAS1839 PF04183 IucA / IucC family BAS1840 PF13193 AMP-binding enzyme C-terminal domain BAS1840 PF00501 AMP-binding enzyme BAS1843 PF01261 Xylose isomerase-like TIM barrel BAS1844 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAS1848 PF01810 LysE type translocator BAS1850 PF01734 Patatin-like phospholipase BAS1854 PF13344 Haloacid dehalogenase-like hydrolase BAS1854 PF00293 NUDIX domain BAS1855 PF02540 NAD synthase BAS1858 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAS1858 PF18277 AbrB C-terminal domain BAS1859 PF00082 Subtilase family BAS1860 PF01022 Bacterial regulatory protein, arsR family BAS1861 PF00248 Aldo/keto reductase family BAS1862 PF07690 Major Facilitator Superfamily BAS1866 PF03193 RsgA GTPase BAS1867 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS1867 PF00672 HAMP domain BAS1867 PF02743 Cache domain BAS1871 PF00210 Ferritin-like domain BAS1874 PF00296 Luciferase-like monooxygenase BAS1876 PF01593 Flavin containing amine oxidoreductase BAS1878 PF00248 Aldo/keto reductase family BAS1879 PF07683 Cobalamin synthesis protein cobW C-terminal domain BAS1879 PF02492 CobW/HypB/UreG, nucleotide-binding domain BAS1880 PF00583 Acetyltransferase (GNAT) family BAS1889 PF01297 Zinc-uptake complex component A periplasmic BAS1889 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BAS1890 PF13460 NAD(P)H-binding BAS1891 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BAS1892 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BAS1892 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BAS1894 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS1895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS1897 PF00300 Histidine phosphatase superfamily (branch 1) BAS1899 PF08757 CotH kinase protein BAS1900 PF00293 NUDIX domain BAS1901 PF09335 SNARE associated Golgi protein BAS1902 PF14667 Polysaccharide biosynthesis C-terminal domain BAS1902 PF01943 Polysaccharide biosynthesis protein BAS1904 PF03773 Predicted permease BAS1905 PF09323 Domain of unknown function (DUF1980) BAS1906 PF03061 Thioesterase superfamily BAS1907 PF13396 Phospholipase_D-nuclease N-terminal BAS1907 PF13091 PLD-like domain BAS1911 PF13460 NAD(P)H-binding BAS1912 PF04306 Protein of unknown function (DUF456) BAS1913 PF00571 CBS domain BAS1913 PF03471 Transporter associated domain BAS1913 PF01595 Cyclin M transmembrane N-terminal domain BAS1916 PF05525 Branched-chain amino acid transport protein BAS1917 PF01588 Putative tRNA binding domain BAS1921 PF07454 Stage II sporulation protein P (SpoIIP) BAS1923 PF02557 D-alanyl-D-alanine carboxypeptidase BAS1925 PF01425 Amidase BAS1926 PF07690 Major Facilitator Superfamily BAS1928 PF01145 SPFH domain / Band 7 family BAS1929 PF00300 Histidine phosphatase superfamily (branch 1) BAS1932 PF01168 Alanine racemase, N-terminal domain BAS1932 PF00842 Alanine racemase, C-terminal domain BAS1933 PF13847 Methyltransferase domain BAS1936 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BAS1937 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAS1937 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS1938 PF00155 Aminotransferase class I and II BAS1938 PF00392 Bacterial regulatory proteins, gntR family BAS1944 PF00583 Acetyltransferase (GNAT) family BAS1953 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BAS1958 PF01209 ubiE/COQ5 methyltransferase family BAS1959 PF01268 Formate--tetrahydrofolate ligase BAS1961 PF00270 DEAD/DEAH box helicase BAS1961 PF00271 Helicase conserved C-terminal domain BAS1962 PF01261 Xylose isomerase-like TIM barrel BAS1963 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS1965 PF00107 Zinc-binding dehydrogenase BAS1965 PF08240 Alcohol dehydrogenase GroES-like domain BAS1966 PF08281 Sigma-70, region 4 BAS1966 PF04542 Sigma-70 region 2 BAS1971 PF00255 Glutathione peroxidase BAS1972 PF13559 Domain of unknown function (DUF4129) BAS1972 PF01841 Transglutaminase-like superfamily BAS1972 PF11992 Domain of unknown function (DUF3488) BAS1973 PF01882 Protein of unknown function DUF58 BAS1974 PF17863 AAA lid domain BAS1974 PF07726 ATPase family associated with various cellular activities (AAA) BAS1977 PF00384 Molybdopterin oxidoreductase BAS1977 PF14710 Respiratory nitrate reductase alpha N-terminal BAS1977 PF01568 Molydopterin dinucleotide binding domain BAS1978 PF14711 Respiratory nitrate reductase beta C-terminal BAS1978 PF13247 4Fe-4S dicluster domain BAS1979 PF02613 Nitrate reductase delta subunit BAS1980 PF02665 Nitrate reductase gamma subunit BAS1981 PF00392 Bacterial regulatory proteins, gntR family BAS1981 PF00155 Aminotransferase class I and II BAS1982 PF00005 ABC transporter BAS1984 PF00325 Bacterial regulatory proteins, crp family BAS1984 PF00027 Cyclic nucleotide-binding domain BAS1985 PF04055 Radical SAM superfamily BAS1985 PF06463 Molybdenum Cofactor Synthesis C BAS1986 PF00899 ThiF family BAS1987 PF00994 Probable molybdopterin binding domain BAS1987 PF03454 MoeA C-terminal region (domain IV) BAS1987 PF03453 MoeA N-terminal region (domain I and II) BAS1988 PF02391 MoaE protein BAS1990 PF07690 Major Facilitator Superfamily BAS1994 PF01903 CbiX BAS1995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAS1996 PF00355 Rieske [2Fe-2S] domain BAS1997 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS1997 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BAS1997 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BAS1997 PF04324 BFD-like [2Fe-2S] binding domain BAS1997 PF18267 Rubredoxin NAD+ reductase C-terminal domain BAS1998 PF04405 Domain of Unknown function (DUF542) BAS1998 PF01814 Hemerythrin HHE cation binding domain BAS2004 PF04232 Stage V sporulation protein S (SpoVS) BAS2006 PF01510 N-acetylmuramoyl-L-alanine amidase BAS2009 PF01966 HD domain BAS2010 PF00005 ABC transporter BAS2010 PF16326 ABC transporter C-terminal domain BAS2010 PF12848 ABC transporter BAS2013 PF00436 Single-strand binding protein family BAS2014 PF00440 Bacterial regulatory proteins, tetR family BAS2017 PF13769 Virulence factor BAS2017 PF08712 Scaffold protein Nfu/NifU N terminal BAS2019 PF06491 Disulphide isomerase BAS2020 PF04445 Putative SAM-dependent methyltransferase BAS2021 PF00750 tRNA synthetases class I (R) BAS2021 PF05746 DALR anticodon binding domain BAS2021 PF03485 Arginyl tRNA synthetase N terminal domain BAS2027 PF00133 tRNA synthetases class I (I, L, M and V) BAS2027 PF08264 Anticodon-binding domain of tRNA BAS2030 PF08245 Mur ligase middle domain BAS2030 PF01225 Mur ligase family, catalytic domain BAS2030 PF02875 Mur ligase family, glutamate ligase domain BAS2031 PF01336 OB-fold nucleic acid binding domain BAS2031 PF00152 tRNA synthetases class II (D, K and N) BAS2035 PF01580 FtsK/SpoIIIE family BAS2035 PF12538 DNA transporter BAS2054 PF02595 Glycerate kinase family BAS2055 PF00939 Sodium:sulfate symporter transmembrane region BAS2056 PF00486 Transcriptional regulatory protein, C terminal BAS2056 PF00072 Response regulator receiver domain BAS2057 PF00512 His Kinase A (phospho-acceptor) domain BAS2057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS2057 PF00672 HAMP domain BAS2060 PF00209 Sodium:neurotransmitter symporter family BAS2063 PF10997 Alternate to MurJ BAS2064 PF13419 Haloacid dehalogenase-like hydrolase BAS2066 PF00465 Iron-containing alcohol dehydrogenase BAS2067 PF01177 Asp/Glu/Hydantoin racemase BAS2068 PF01980 tRNA-methyltransferase O BAS2069 PF00583 Acetyltransferase (GNAT) family BAS2073 PF00005 ABC transporter BAS2076 PF14005 YpjP-like protein BAS2077 PF13419 Haloacid dehalogenase-like hydrolase BAS2081 PF07930 D-aminopeptidase, domain B BAS2081 PF00144 Beta-lactamase BAS2082 PF00303 Thymidylate synthase BAS2083 PF00186 Dihydrofolate reductase BAS2084 PF03717 Penicillin-binding Protein dimerisation domain BAS2084 PF05223 NTF2-like N-terminal transpeptidase domain BAS2084 PF00905 Penicillin binding protein transpeptidase domain BAS2085 PF02525 Flavodoxin-like fold BAS2086 PF01553 Acyltransferase BAS2087 PF03006 Haemolysin-III related BAS2088 PF02416 mttA/Hcf106 family BAS2089 PF00902 Sec-independent protein translocase protein (TatC) BAS2091 PF02645 Uncharacterised protein, DegV family COG1307 BAS2093 PF02630 SCO1/SenC BAS2094 PF00011 Hsp20/alpha crystallin family BAS2095 PF00733 Asparagine synthase BAS2095 PF13537 Glutamine amidotransferase domain BAS2099 PF01497 Periplasmic binding protein BAS2100 PF01063 Amino-transferase class IV BAS2101 PF00881 Nitroreductase family BAS2105 PF00293 NUDIX domain BAS2106 PF00011 Hsp20/alpha crystallin family BAS2107 PF00924 Mechanosensitive ion channel BAS2108 PF13185 GAF domain BAS2108 PF07730 Histidine kinase BAS2109 PF00196 Bacterial regulatory proteins, luxR family BAS2109 PF00072 Response regulator receiver domain BAS2111 PF08240 Alcohol dehydrogenase GroES-like domain BAS2111 PF00107 Zinc-binding dehydrogenase BAS2118 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAS2118 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAS2122 PF03358 NADPH-dependent FMN reductase BAS2125 PF00005 ABC transporter BAS2125 PF00571 CBS domain BAS2126 PF00528 Binding-protein-dependent transport system inner membrane component BAS2127 PF13520 Amino acid permease BAS2134 PF01595 Cyclin M transmembrane N-terminal domain BAS2134 PF03471 Transporter associated domain BAS2134 PF00571 CBS domain BAS2135 PF00171 Aldehyde dehydrogenase family BAS2136 PF07997 Protein of unknown function (DUF1694) BAS2137 PF09385 Histidine kinase N terminal BAS2139 PF00202 Aminotransferase class-III BAS2140 PF01144 Coenzyme A transferase BAS2141 PF01144 Coenzyme A transferase BAS2142 PF07687 Peptidase dimerisation domain BAS2142 PF01546 Peptidase family M20/M25/M40 BAS2143 PF00583 Acetyltransferase (GNAT) family BAS2144 PF00158 Sigma-54 interaction domain BAS2144 PF13426 PAS domain BAS2144 PF02954 Bacterial regulatory protein, Fis family BAS2145 PF12544 Lysine-2,3-aminomutase BAS2146 PF14122 YokU-like protein, putative antitoxin BAS2147 PF06855 YozE SAM-like fold BAS2150 PF14162 YozD-like protein BAS2153 PF07070 SpoOM protein BAS2154 PF01569 PAP2 superfamily BAS2155 PF16916 Dimerisation domain of Zinc Transporter BAS2155 PF01545 Cation efflux family BAS2156 PF00085 Thioredoxin BAS2159 PF04740 LXG domain of WXG superfamily BAS2159 PF14436 Bacterial EndoU nuclease BAS2160 PF00150 Cellulase (glycosyl hydrolase family 5) BAS2160 PF03424 Carbohydrate binding domain (family 17/28) BAS2160 PF00395 S-layer homology domain BAS2162 PF04471 Restriction endonuclease BAS2182 PF10676 Spore germination protein gerPA/gerPF BAS2185 PF00905 Penicillin binding protein transpeptidase domain BAS2185 PF00912 Transglycosylase BAS2186 PF07690 Major Facilitator Superfamily BAS2187 PF01521 Iron-sulphur cluster biosynthesis BAS2188 PF00285 Citrate synthase, C-terminal domain BAS2189 PF03972 MmgE/PrpD family BAS2191 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAS2191 PF02770 Acyl-CoA dehydrogenase, middle domain BAS2191 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAS2192 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BAS2192 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAS2193 PF00171 Aldehyde dehydrogenase family BAS2194 PF01810 LysE type translocator BAS2195 PF00378 Enoyl-CoA hydratase/isomerase BAS2197 PF10763 Protein of unknown function (DUF2584) BAS2198 PF12320 Type 5 capsule protein repressor C-terminal domain BAS2198 PF00149 Calcineurin-like phosphoesterase BAS2199 PF13476 AAA domain BAS2201 PF01022 Bacterial regulatory protein, arsR family BAS2203 PF07690 Major Facilitator Superfamily BAS2204 PF00106 short chain dehydrogenase BAS2205 PF00425 chorismate binding enzyme BAS2206 PF13193 AMP-binding enzyme C-terminal domain BAS2206 PF00501 AMP-binding enzyme BAS2207 PF00857 Isochorismatase family BAS2207 PF00550 Phosphopantetheine attachment site BAS2208 PF00501 AMP-binding enzyme BAS2208 PF13193 AMP-binding enzyme C-terminal domain BAS2208 PF00668 Condensation domain BAS2208 PF00975 Thioesterase domain BAS2208 PF00550 Phosphopantetheine attachment site BAS2209 PF03621 MbtH-like protein BAS2210 PF07690 Major Facilitator Superfamily BAS2213 PF00216 Bacterial DNA-binding protein BAS2215 PF05163 DinB family BAS2216 PF00082 Subtilase family BAS2217 PF01235 Sodium:alanine symporter family BAS2220 PF16291 Domain of unknown function (DUF4937 BAS2221 PF00849 RNA pseudouridylate synthase BAS2221 PF01479 S4 domain BAS2222 PF03129 Anticodon binding domain BAS2222 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAS2222 PF02824 TGS domain BAS2222 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAS2226 PF12146 Serine aminopeptidase, S33 BAS2227 PF07690 Major Facilitator Superfamily BAS2232 PF13649 Methyltransferase domain BAS2241 PF00753 Metallo-beta-lactamase superfamily BAS2241 PF16123 Hydroxyacylglutathione hydrolase C-terminus BAS2243 PF03176 MMPL family BAS2245 PF00302 Chloramphenicol acetyltransferase BAS2248 PF00583 Acetyltransferase (GNAT) family BAS2253 PF01593 Flavin containing amine oxidoreductase BAS2255 PF13302 Acetyltransferase (GNAT) domain BAS2257 PF00313 'Cold-shock' DNA-binding domain BAS2267 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS2267 PF03466 LysR substrate binding domain BAS2268 PF02774 Semialdehyde dehydrogenase, dimerisation domain BAS2268 PF01118 Semialdehyde dehydrogenase, NAD binding domain BAS2271 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS2271 PF03466 LysR substrate binding domain BAS2272 PF03475 3-alpha domain BAS2272 PF03473 MOSC domain BAS2275 PF00005 ABC transporter BAS2275 PF00664 ABC transporter transmembrane region BAS2276 PF00664 ABC transporter transmembrane region BAS2276 PF00005 ABC transporter BAS2278 PF01810 LysE type translocator BAS2279 PF07883 Cupin domain BAS2279 PF01381 Helix-turn-helix BAS2284 PF00890 FAD binding domain BAS2285 PF04542 Sigma-70 region 2 BAS2285 PF08281 Sigma-70, region 4 BAS2285 PF12680 SnoaL-like domain BAS2289 PF02638 Glycosyl hydrolase-like 10 BAS2291 PF02378 Phosphotransferase system, EIIC BAS2293 PF03702 Anhydro-N-acetylmuramic acid kinase BAS2294 PF01869 BadF/BadG/BcrA/BcrD ATPase family BAS2295 PF02660 Glycerol-3-phosphate acyltransferase BAS2296 PF00266 Aminotransferase class-V BAS2297 PF00291 Pyridoxal-phosphate dependent enzyme BAS2298 PF00753 Metallo-beta-lactamase superfamily BAS2298 PF16123 Hydroxyacylglutathione hydrolase C-terminus BAS2301 PF00271 Helicase conserved C-terminal domain BAS2301 PF00270 DEAD/DEAH box helicase BAS2304 PF00440 Bacterial regulatory proteins, tetR family BAS2304 PF17932 Tetracyclin repressor-like, C-terminal domain BAS2307 PF00005 ABC transporter BAS2307 PF02687 FtsX-like permease family BAS2307 PF12704 MacB-like periplasmic core domain BAS2308 PF03848 Tellurite resistance protein TehB BAS2308 PF09313 Domain of unknown function (DUF1971) BAS2310 PF08241 Methyltransferase domain BAS2311 PF00205 Thiamine pyrophosphate enzyme, central domain BAS2311 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAS2311 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAS2312 PF12802 MarR family BAS2313 PF00300 Histidine phosphatase superfamily (branch 1) BAS2314 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BAS2319 PF01546 Peptidase family M20/M25/M40 BAS2319 PF07687 Peptidase dimerisation domain BAS2323 PF08281 Sigma-70, region 4 BAS2323 PF04542 Sigma-70 region 2 BAS2325 PF03717 Penicillin-binding Protein dimerisation domain BAS2325 PF00905 Penicillin binding protein transpeptidase domain BAS2329 PF01569 PAP2 superfamily BAS2330 PF00356 Bacterial regulatory proteins, lacI family BAS2331 PF07690 Major Facilitator Superfamily BAS2332 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAS2332 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAS2333 PF00294 pfkB family carbohydrate kinase BAS2334 PF00171 Aldehyde dehydrogenase family BAS2335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAS2335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAS2335 PF00205 Thiamine pyrophosphate enzyme, central domain BAS2337 PF01116 Fructose-bisphosphate aldolase class-II BAS2338 PF04962 KduI/IolB family BAS2346 PF18801 response regulator aspartate phosphatase H, N terminal BAS2347 PF01381 Helix-turn-helix BAS2349 PF02557 D-alanyl-D-alanine carboxypeptidase BAS2351 PF00395 S-layer homology domain BAS2351 PF01520 N-acetylmuramoyl-L-alanine amidase BAS2354 PF00440 Bacterial regulatory proteins, tetR family BAS2355 PF00005 ABC transporter BAS2355 PF16326 ABC transporter C-terminal domain BAS2357 PF03707 Bacterial signalling protein N terminal repeat BAS2357 PF00990 Diguanylate cyclase, GGDEF domain BAS2357 PF00563 EAL domain BAS2358 PF13302 Acetyltransferase (GNAT) domain BAS2360 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS2361 PF00581 Rhodanese-like domain BAS2364 PF00005 ABC transporter BAS2366 PF00440 Bacterial regulatory proteins, tetR family BAS2366 PF08359 YsiA-like protein, C-terminal region BAS2369 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAS2369 PF02770 Acyl-CoA dehydrogenase, middle domain BAS2369 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAS2370 PF00289 Biotin carboxylase, N-terminal domain BAS2370 PF02785 Biotin carboxylase C-terminal domain BAS2370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAS2371 PF00364 Biotin-requiring enzyme BAS2372 PF00682 HMGL-like BAS2374 PF00378 Enoyl-CoA hydratase/isomerase BAS2375 PF01039 Carboxyl transferase domain BAS2376 PF16177 Acetyl-coenzyme A synthetase N-terminus BAS2376 PF00501 AMP-binding enzyme BAS2376 PF13193 AMP-binding enzyme C-terminal domain BAS2378 PF00583 Acetyltransferase (GNAT) family BAS2379 PF00485 Phosphoribulokinase / Uridine kinase family BAS2381 PF05163 DinB family BAS2384 PF00512 His Kinase A (phospho-acceptor) domain BAS2384 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS2385 PF00486 Transcriptional regulatory protein, C terminal BAS2385 PF00072 Response regulator receiver domain BAS2386 PF01966 HD domain BAS2387 PF13021 Domain of unknown function (DUF3885) BAS2388 PF01048 Phosphorylase superfamily BAS2397 PF17760 UvrA interaction domain BAS2397 PF17755 UvrA DNA-binding domain BAS2397 PF17760 UvrA interaction domain BAS2397 PF17755 UvrA DNA-binding domain BAS2400 PF00144 Beta-lactamase BAS2401 PF00376 MerR family regulatory protein BAS2401 PF09278 MerR, DNA binding BAS2402 PF07690 Major Facilitator Superfamily BAS2405 PF01636 Phosphotransferase enzyme family BAS2406 PF12833 Helix-turn-helix domain BAS2409 PF00155 Aminotransferase class I and II BAS2409 PF00392 Bacterial regulatory proteins, gntR family BAS2412 PF00107 Zinc-binding dehydrogenase BAS2412 PF08240 Alcohol dehydrogenase GroES-like domain BAS2417 PF07486 Cell Wall Hydrolase BAS2419 PF00486 Transcriptional regulatory protein, C terminal BAS2419 PF00072 Response regulator receiver domain BAS2423 PF12848 ABC transporter BAS2423 PF00005 ABC transporter BAS2424 PF00005 ABC transporter BAS2424 PF12848 ABC transporter BAS2427 PF00005 ABC transporter BAS2433 PF03447 Homoserine dehydrogenase, NAD binding domain BAS2433 PF00742 Homoserine dehydrogenase BAS2433 PF01842 ACT domain BAS2434 PF00392 Bacterial regulatory proteins, gntR family BAS2434 PF00155 Aminotransferase class I and II BAS2435 PF07478 D-ala D-ala ligase C-terminus BAS2435 PF01820 D-ala D-ala ligase N-terminus BAS2436 PF03070 TENA/THI-4/PQQC family BAS2448 PF00067 Cytochrome P450 BAS2450 PF00132 Bacterial transferase hexapeptide (six repeats) BAS2452 PF00067 Cytochrome P450 BAS2456 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS2456 PF13426 PAS domain BAS2456 PF13188 PAS domain BAS2456 PF00989 PAS fold BAS2456 PF00512 His Kinase A (phospho-acceptor) domain BAS2457 PF00905 Penicillin binding protein transpeptidase domain BAS2457 PF03717 Penicillin-binding Protein dimerisation domain BAS2458 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BAS2459 PF01177 Asp/Glu/Hydantoin racemase BAS2460 PF07155 ECF-type riboflavin transporter, S component BAS2461 PF12558 ATP-binding cassette cobalt transporter BAS2461 PF00005 ABC transporter BAS2463 PF00512 His Kinase A (phospho-acceptor) domain BAS2463 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS2465 PF04229 GrpB protein BAS2466 PF00107 Zinc-binding dehydrogenase BAS2466 PF08240 Alcohol dehydrogenase GroES-like domain BAS2467 PF00905 Penicillin binding protein transpeptidase domain BAS2467 PF03717 Penicillin-binding Protein dimerisation domain BAS2467 PF03793 PASTA domain BAS2469 PF00144 Beta-lactamase BAS2469 PF11954 Domain of unknown function (DUF3471) BAS2475 PF01965 DJ-1/PfpI family BAS2478 PF00144 Beta-lactamase BAS2481 PF07690 Major Facilitator Superfamily BAS2484 PF03009 Glycerophosphoryl diester phosphodiesterase family BAS2489 PF00892 EamA-like transporter family BAS2490 PF01270 Glycosyl hydrolases family 8 BAS2492 PF00293 NUDIX domain BAS2494 PF00144 Beta-lactamase BAS2495 PF07690 Major Facilitator Superfamily BAS2498 PF00293 NUDIX domain BAS2498 PF09297 NADH pyrophosphatase zinc ribbon domain BAS2499 PF02768 DNA polymerase III beta subunit, C-terminal domain BAS2499 PF02767 DNA polymerase III beta subunit, central domain BAS2499 PF00712 DNA polymerase III beta subunit, N-terminal domain BAS2500 PF00293 NUDIX domain BAS2503 PF12706 Beta-lactamase superfamily domain BAS2507 PF09234 Domain of unknown function (DUF1963) BAS2513 PF08000 Bacterial PH domain BAS2515 PF12867 DinB superfamily BAS2521 PF01541 GIY-YIG catalytic domain BAS2529 PF01266 FAD dependent oxidoreductase BAS2534 PF13419 Haloacid dehalogenase-like hydrolase BAS2539 PF00282 Pyridoxal-dependent decarboxylase conserved domain BAS2540 PF13193 AMP-binding enzyme C-terminal domain BAS2540 PF00668 Condensation domain BAS2540 PF00550 Phosphopantetheine attachment site BAS2540 PF00501 AMP-binding enzyme BAS2542 PF00128 Alpha amylase, catalytic domain BAS2542 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BAS2542 PF03714 Bacterial pullanase-associated domain BAS2543 PF03413 Peptidase propeptide and YPEB domain BAS2543 PF07504 Fungalysin/Thermolysin Propeptide Motif BAS2543 PF01447 Thermolysin metallopeptidase, catalytic domain BAS2543 PF02868 Thermolysin metallopeptidase, alpha-helical domain BAS2547 PF00344 SecY translocase BAS2548 PF08299 Bacterial dnaA protein helix-turn-helix BAS2548 PF11638 DnaA N-terminal domain BAS2548 PF00308 Bacterial dnaA protein BAS2549 PF00892 EamA-like transporter family BAS2550 PF00155 Aminotransferase class I and II BAS2550 PF00392 Bacterial regulatory proteins, gntR family BAS2551 PF00561 alpha/beta hydrolase fold BAS2557 PF06081 Aromatic acid exporter family member 1 BAS2560 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAS2561 PF03413 Peptidase propeptide and YPEB domain BAS2561 PF14620 YpeB sporulation BAS2562 PF07486 Cell Wall Hydrolase BAS2562 PF01471 Putative peptidoglycan binding domain BAS2565 PF03301 Tryptophan 2,3-dioxygenase BAS2566 PF04199 Putative cyclase BAS2567 PF00266 Aminotransferase class-V BAS2568 PF00440 Bacterial regulatory proteins, tetR family BAS2568 PF08359 YsiA-like protein, C-terminal region BAS2569 PF13344 Haloacid dehalogenase-like hydrolase BAS2569 PF00293 NUDIX domain BAS2574 PF01590 GAF domain BAS2574 PF02954 Bacterial regulatory protein, Fis family BAS2574 PF00158 Sigma-54 interaction domain BAS2577 PF13302 Acetyltransferase (GNAT) domain BAS2578 PF00455 DeoR C terminal sensor domain BAS2578 PF08220 DeoR-like helix-turn-helix domain BAS2581 PF00403 Heavy-metal-associated domain BAS2581 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS2581 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAS2582 PF02082 Transcriptional regulator BAS2585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAS2585 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS2586 PF00364 Biotin-requiring enzyme BAS2586 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAS2586 PF02817 e3 binding domain BAS2587 PF02779 Transketolase, pyrimidine binding domain BAS2587 PF02780 Transketolase, C-terminal domain BAS2588 PF00676 Dehydrogenase E1 component BAS2590 PF00106 short chain dehydrogenase BAS2591 PF04229 GrpB protein BAS2591 PF13673 Acetyltransferase (GNAT) domain BAS2596 PF00528 Binding-protein-dependent transport system inner membrane component BAS2597 PF00005 ABC transporter BAS2597 PF00571 CBS domain BAS2598 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BAS2599 PF00574 Clp protease BAS2602 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BAS2603 PF13673 Acetyltransferase (GNAT) domain BAS2604 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BAS2604 PF18416 N-acetylglucosamine binding protein domain 2 BAS2607 PF10990 Protein of unknown function (DUF2809) BAS2613 PF03772 Competence protein BAS2613 PF13567 Domain of unknown function (DUF4131) BAS2613 PF00753 Metallo-beta-lactamase superfamily BAS2623 PF13538 UvrD-like helicase C-terminal domain BAS2626 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BAS2627 PF00270 DEAD/DEAH box helicase BAS2627 PF00570 HRDC domain BAS2627 PF16124 RecQ zinc-binding BAS2627 PF09382 RQC domain BAS2627 PF00271 Helicase conserved C-terminal domain BAS2635 PF02833 DHHA2 domain BAS2635 PF01368 DHH family BAS2636 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BAS2636 PF18416 N-acetylglucosamine binding protein domain 2 BAS2638 PF02627 Carboxymuconolactone decarboxylase family BAS2639 PF01235 Sodium:alanine symporter family BAS2640 PF00171 Aldehyde dehydrogenase family BAS2641 PF00701 Dihydrodipicolinate synthetase family BAS2642 PF05544 Proline racemase BAS2643 PF05544 Proline racemase BAS2644 PF01266 FAD dependent oxidoreductase BAS2645 PF02954 Bacterial regulatory protein, Fis family BAS2645 PF13188 PAS domain BAS2645 PF00158 Sigma-54 interaction domain BAS2648 PF04324 BFD-like [2Fe-2S] binding domain BAS2648 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS2651 PF08876 Domain of unknown function (DUF1836) BAS2652 PF09335 SNARE associated Golgi protein BAS2655 PF04914 DltD protein BAS2656 PF13302 Acetyltransferase (GNAT) domain BAS2656 PF00958 GMP synthase C terminal domain BAS2656 PF13673 Acetyltransferase (GNAT) domain BAS2656 PF00117 Glutamine amidotransferase class-I BAS2656 PF03352 Methyladenine glycosylase BAS2657 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS2658 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BAS2658 PF00877 NlpC/P60 family BAS2659 PF13378 Enolase C-terminal domain-like BAS2659 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BAS2661 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAS2667 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BAS2667 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BAS2668 PF16736 Single Cache-like BAS2668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS2668 PF00989 PAS fold BAS2668 PF00512 His Kinase A (phospho-acceptor) domain BAS2673 PF01048 Phosphorylase superfamily BAS2675 PF03808 Glycosyl transferase WecB/TagA/CpsF family BAS2679 PF02645 Uncharacterised protein, DegV family COG1307 BAS2683 PF07690 Major Facilitator Superfamily BAS2685 PF04519 Polymer-forming cytoskeletal BAS2686 PF13171 Protein of unknown function (DUF4004) BAS2687 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS2687 PF12793 Sugar transport-related sRNA regulator N-term BAS2688 PF07690 Major Facilitator Superfamily BAS2692 PF04226 Transglycosylase associated protein BAS2693 PF01156 Inosine-uridine preferring nucleoside hydrolase BAS2695 PF08241 Methyltransferase domain BAS2700 PF00155 Aminotransferase class I and II BAS2701 PF07977 FabA-like domain BAS2702 PF03630 Fumble BAS2707 PF00005 ABC transporter BAS2709 PF01594 AI-2E family transporter BAS2711 PF00296 Luciferase-like monooxygenase BAS2712 PF00528 Binding-protein-dependent transport system inner membrane component BAS2713 PF09084 NMT1/THI5 like BAS2714 PF00005 ABC transporter BAS2718 PF09297 NADH pyrophosphatase zinc ribbon domain BAS2718 PF00293 NUDIX domain BAS2722 PF02522 Aminoglycoside 3-N-acetyltransferase BAS2727 PF13536 Putative multidrug resistance efflux transporter BAS2728 PF12867 DinB superfamily BAS2732 PF08713 DNA alkylation repair enzyme BAS2734 PF01522 Polysaccharide deacetylase BAS2736 PF03741 Integral membrane protein TerC family BAS2737 PF00884 Sulfatase BAS2738 PF00005 ABC transporter BAS2738 PF12848 ABC transporter BAS2742 PF00440 Bacterial regulatory proteins, tetR family BAS2742 PF16295 Tetracyclin repressor-like, C-terminal domain BAS2744 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAS2745 PF02153 Prephenate dehydrogenase BAS2745 PF01842 ACT domain BAS2746 PF00155 Aminotransferase class I and II BAS2747 PF01264 Chorismate synthase BAS2748 PF00793 DAHP synthetase I family BAS2748 PF01817 Chorismate mutase type II BAS2753 PF01636 Phosphotransferase enzyme family BAS2756 PF06725 3D domain BAS2756 PF01476 LysM domain BAS2758 PF08281 Sigma-70, region 4 BAS2758 PF04542 Sigma-70 region 2 BAS2762 PF06039 Malate:quinone oxidoreductase (Mqo) BAS2763 PF13407 Periplasmic binding protein domain BAS2764 PF02653 Branched-chain amino acid transport system / permease component BAS2765 PF02653 Branched-chain amino acid transport system / permease component BAS2766 PF00005 ABC transporter BAS2767 PF04198 Putative sugar-binding domain BAS2767 PF00325 Bacterial regulatory proteins, crp family BAS2771 PF01791 DeoC/LacD family aldolase BAS2776 PF03992 Antibiotic biosynthesis monooxygenase BAS2780 PF07662 Na+ dependent nucleoside transporter C-terminus BAS2780 PF01773 Na+ dependent nucleoside transporter N-terminus BAS2781 PF00171 Aldehyde dehydrogenase family BAS2782 PF00696 Amino acid kinase family BAS2782 PF01472 PUA domain BAS2783 PF03807 NADP oxidoreductase coenzyme F420-dependent BAS2783 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAS2784 PF01546 Peptidase family M20/M25/M40 BAS2785 PF09339 IclR helix-turn-helix domain BAS2785 PF01614 Bacterial transcriptional regulator BAS2786 PF00324 Amino acid permease BAS2787 PF01139 tRNA-splicing ligase RtcB BAS2788 PF00487 Fatty acid desaturase BAS2789 PF00245 Alkaline phosphatase BAS2790 PF11188 Protein of unknown function (DUF2975) BAS2791 PF13443 Cro/C1-type HTH DNA-binding domain BAS2794 PF10086 YhfC intramembrane metalloprotease BAS2796 PF04397 LytTr DNA-binding domain BAS2796 PF00072 Response regulator receiver domain BAS2798 PF13302 Acetyltransferase (GNAT) domain BAS2799 PF12681 Glyoxalase-like domain BAS2803 PF17863 AAA lid domain BAS2803 PF07726 ATPase family associated with various cellular activities (AAA) BAS2807 PF07690 Major Facilitator Superfamily BAS2808 PF00535 Glycosyl transferase family 2 BAS2811 PF00535 Glycosyl transferase family 2 BAS2813 PF00535 Glycosyl transferase family 2 BAS2815 PF00202 Aminotransferase class-III BAS2816 PF00199 Catalase BAS2816 PF06628 Catalase-related immune-responsive BAS2818 PF13382 Adenine deaminase C-terminal domain BAS2818 PF01979 Amidohydrolase family BAS2819 PF00144 Beta-lactamase BAS2824 PF07726 ATPase family associated with various cellular activities (AAA) BAS2824 PF17863 AAA lid domain BAS2826 PF00881 Nitroreductase family BAS2827 PF01047 MarR family BAS2828 PF00679 Elongation factor G C-terminus BAS2828 PF03764 Elongation factor G, domain IV BAS2828 PF00009 Elongation factor Tu GTP binding domain BAS2828 PF14492 Elongation Factor G, domain II BAS2830 PF00293 NUDIX domain BAS2834 PF00005 ABC transporter BAS2835 PF00392 Bacterial regulatory proteins, gntR family BAS2837 PF00005 ABC transporter BAS2837 PF02687 FtsX-like permease family BAS2837 PF12704 MacB-like periplasmic core domain BAS2843 PF12833 Helix-turn-helix domain BAS2844 PF00583 Acetyltransferase (GNAT) family BAS2847 PF00392 Bacterial regulatory proteins, gntR family BAS2847 PF00155 Aminotransferase class I and II BAS2848 PF00892 EamA-like transporter family BAS2849 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BAS2850 PF13031 Protein of unknown function (DUF3892) BAS2852 PF00672 HAMP domain BAS2852 PF00512 His Kinase A (phospho-acceptor) domain BAS2853 PF00072 Response regulator receiver domain BAS2853 PF00486 Transcriptional regulatory protein, C terminal BAS2854 PF00561 alpha/beta hydrolase fold BAS2859 PF01925 Sulfite exporter TauE/SafE BAS2861 PF13302 Acetyltransferase (GNAT) domain BAS2862 PF00324 Amino acid permease BAS2864 PF08713 DNA alkylation repair enzyme BAS2865 PF10898 Protein of unknown function (DUF2716) BAS2871 PF10502 Signal peptidase, peptidase S26 BAS2872 PF00905 Penicillin binding protein transpeptidase domain BAS2872 PF03717 Penicillin-binding Protein dimerisation domain BAS2874 PF02146 Sir2 family BAS2875 PF01470 Pyroglutamyl peptidase BAS2880 PF03746 LamB/YcsF family BAS2881 PF02626 Carboxyltransferase domain, subdomain A and B BAS2882 PF02682 Carboxyltransferase domain, subdomain C and D BAS2883 PF09339 IclR helix-turn-helix domain BAS2883 PF01614 Bacterial transcriptional regulator BAS2884 PF10502 Signal peptidase, peptidase S26 BAS2885 PF03932 CutC family BAS2886 PF07454 Stage II sporulation protein P (SpoIIP) BAS2889 PF02770 Acyl-CoA dehydrogenase, middle domain BAS2889 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BAS2889 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAS2893 PF07670 Nucleoside recognition BAS2896 PF02915 Rubrerythrin BAS2898 PF00440 Bacterial regulatory proteins, tetR family BAS2899 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BAS2899 PF00391 PEP-utilising enzyme, mobile domain BAS2900 PF00753 Metallo-beta-lactamase superfamily BAS2903 PF07875 Coat F domain BAS2904 PF08892 YqcI/YcgG family BAS2905 PF01810 LysE type translocator BAS2908 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAS2909 PF10710 Protein of unknown function (DUF2512) BAS2910 PF11553 Protein of unknown function (DUF3231) BAS2911 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAS2912 PF00107 Zinc-binding dehydrogenase BAS2912 PF13823 Alcohol dehydrogenase GroES-associated BAS2912 PF08240 Alcohol dehydrogenase GroES-like domain BAS2915 PF10415 Fumarase C C-terminus BAS2915 PF00206 Lyase BAS2916 PF17763 Glutaminase/Asparaginase C-terminal domain BAS2916 PF00710 Asparaginase, N-terminal BAS2917 PF01381 Helix-turn-helix BAS2918 PF08459 UvrC Helix-hairpin-helix N-terminal BAS2918 PF02151 UvrB/uvrC motif BAS2918 PF12826 Helix-hairpin-helix motif BAS2918 PF01541 GIY-YIG catalytic domain BAS2919 PF13520 Amino acid permease BAS2920 PF05525 Branched-chain amino acid transport protein BAS2921 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAS2921 PF03807 NADP oxidoreductase coenzyme F420-dependent BAS2922 PF13564 DoxX-like family BAS2923 PF00390 Malic enzyme, N-terminal domain BAS2923 PF03949 Malic enzyme, NAD binding domain BAS2927 PF03845 Spore germination protein BAS2928 PF03323 Bacillus/Clostridium GerA spore germination protein BAS2929 PF00072 Response regulator receiver domain BAS2929 PF08664 YcbB domain BAS2932 PF04960 Glutaminase BAS2939 PF00149 Calcineurin-like phosphoesterase BAS2939 PF02872 5'-nucleotidase, C-terminal domain BAS2939 PF17936 Bacterial Ig domain BAS2940 PF00199 Catalase BAS2940 PF06628 Catalase-related immune-responsive BAS2941 PF00561 alpha/beta hydrolase fold BAS2942 PF00857 Isochorismatase family BAS2948 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS2948 PF03466 LysR substrate binding domain BAS2949 PF01544 CorA-like Mg2+ transporter protein BAS2952 PF11181 Heat induced stress protein YflT BAS2955 PF03073 TspO/MBR family BAS2956 PF00875 DNA photolyase BAS2956 PF03441 FAD binding domain of DNA photolyase BAS2958 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BAS2959 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BAS2959 PF00361 Proton-conducting membrane transporter BAS2960 PF10057 Uncharacterized conserved protein (DUF2294) BAS2962 PF01040 UbiA prenyltransferase family BAS2963 PF00561 alpha/beta hydrolase fold BAS2964 PF01297 Zinc-uptake complex component A periplasmic BAS2965 PF00950 ABC 3 transport family BAS2966 PF00005 ABC transporter BAS2971 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAS2972 PF01758 Sodium Bile acid symporter family BAS2973 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS2974 PF01022 Bacterial regulatory protein, arsR family BAS2977 PF00012 Hsp70 protein BAS2980 PF01037 Lrp/AsnC ligand binding domain BAS2983 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS2985 PF01609 Transposase DDE domain BAS2989 PF00144 Beta-lactamase BAS2992 PF12802 MarR family BAS2993 PF00175 Oxidoreductase NAD-binding domain BAS2993 PF00067 Cytochrome P450 BAS2993 PF00667 FAD binding domain BAS2993 PF00258 Flavodoxin BAS2994 PF07690 Major Facilitator Superfamily BAS2999 PF00486 Transcriptional regulatory protein, C terminal BAS2999 PF00072 Response regulator receiver domain BAS3000 PF00512 His Kinase A (phospho-acceptor) domain BAS3000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS3000 PF00672 HAMP domain BAS3005 PF00291 Pyridoxal-phosphate dependent enzyme BAS3012 PF01381 Helix-turn-helix BAS3015 PF00753 Metallo-beta-lactamase superfamily BAS3016 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BAS3018 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAS3018 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAS3019 PF04072 Leucine carboxyl methyltransferase BAS3022 PF00005 ABC transporter BAS3023 PF02687 FtsX-like permease family BAS3027 PF00672 HAMP domain BAS3027 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS3027 PF00512 His Kinase A (phospho-acceptor) domain BAS3028 PF00486 Transcriptional regulatory protein, C terminal BAS3028 PF00072 Response regulator receiver domain BAS3030 PF01047 MarR family BAS3031 PF00583 Acetyltransferase (GNAT) family BAS3032 PF04299 Putative FMN-binding domain BAS3033 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS3033 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAS3034 PF07690 Major Facilitator Superfamily BAS3035 PF02589 LUD domain BAS3036 PF13183 4Fe-4S dicluster domain BAS3036 PF02589 LUD domain BAS3036 PF11870 Domain of unknown function (DUF3390) BAS3037 PF02754 Cysteine-rich domain BAS3038 PF03466 LysR substrate binding domain BAS3038 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS3040 PF17676 LD-carboxypeptidase C-terminal domain BAS3040 PF02016 LD-carboxypeptidase N-terminal domain BAS3044 PF07690 Major Facilitator Superfamily BAS3045 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAS3045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAS3046 PF05116 Sucrose-6F-phosphate phosphohydrolase BAS3049 PF00356 Bacterial regulatory proteins, lacI family BAS3050 PF18801 response regulator aspartate phosphatase H, N terminal BAS3053 PF00817 impB/mucB/samB family BAS3053 PF11799 impB/mucB/samB family C-terminal domain BAS3053 PF11798 IMS family HHH motif BAS3056 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS3056 PF00672 HAMP domain BAS3056 PF02743 Cache domain BAS3059 PF01554 MatE BAS3060 PF18496 Collagenase G catalytic helper subdomain BAS3060 PF01752 Collagenase BAS3060 PF08453 Peptidase family M9 N-terminal BAS3061 PF02661 Fic/DOC family BAS3062 PF07690 Major Facilitator Superfamily BAS3063 PF16859 Tetracyclin repressor-like, C-terminal domain BAS3063 PF00440 Bacterial regulatory proteins, tetR family BAS3065 PF01022 Bacterial regulatory protein, arsR family BAS3067 PF03313 Serine dehydratase alpha chain BAS3068 PF03315 Serine dehydratase beta chain BAS3068 PF01842 ACT domain BAS3069 PF00202 Aminotransferase class-III BAS3070 PF07503 HypF finger BAS3070 PF17788 HypF Kae1-like domain BAS3070 PF00708 Acylphosphatase BAS3070 PF01300 Telomere recombination BAS3071 PF00586 AIR synthase related protein, N-terminal domain BAS3071 PF02769 AIR synthase related protein, C-terminal domain BAS3072 PF00857 Isochorismatase family BAS3073 PF01037 Lrp/AsnC ligand binding domain BAS3074 PF13520 Amino acid permease BAS3078 PF01842 ACT domain BAS3078 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAS3078 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAS3079 PF00266 Aminotransferase class-V BAS3082 PF08281 Sigma-70, region 4 BAS3082 PF04542 Sigma-70 region 2 BAS3085 PF07883 Cupin domain BAS3086 PF01497 Periplasmic binding protein BAS3086 PF12833 Helix-turn-helix domain BAS3087 PF01804 Penicillin amidase BAS3096 PF14044 NETI protein BAS3097 PF07690 Major Facilitator Superfamily BAS3098 PF12697 Alpha/beta hydrolase family BAS3099 PF01047 MarR family BAS3100 PF07690 Major Facilitator Superfamily BAS3102 PF12679 ABC-2 family transporter protein BAS3103 PF00005 ABC transporter BAS3103 PF13732 Domain of unknown function (DUF4162) BAS3104 PF13396 Phospholipase_D-nuclease N-terminal BAS3106 PF17314 Family of unknown function (DUF5360) BAS3107 PF00893 Small Multidrug Resistance protein BAS3108 PF00440 Bacterial regulatory proteins, tetR family BAS3109 PF17440 Thiol-activated cytolysin beta sandwich domain BAS3109 PF01289 Thiol-activated cytolysin BAS3110 PF02667 Short chain fatty acid transporter BAS3112 PF02525 Flavodoxin-like fold BAS3116 PF14256 YwiC-like protein BAS3118 PF00005 ABC transporter BAS3119 PF02361 Cobalt transport protein BAS3122 PF03737 Aldolase/RraA BAS3123 PF03606 C4-dicarboxylate anaerobic carrier BAS3124 PF04231 Endonuclease I BAS3127 PF01381 Helix-turn-helix BAS3128 PF02660 Glycerol-3-phosphate acyltransferase BAS3129 PF04073 Aminoacyl-tRNA editing domain BAS3130 PF03129 Anticodon binding domain BAS3130 PF13393 Histidyl-tRNA synthetase BAS3133 PF01638 HxlR-like helix-turn-helix BAS3134 PF00881 Nitroreductase family BAS3136 PF02887 Pyruvate kinase, alpha/beta domain BAS3136 PF00391 PEP-utilising enzyme, mobile domain BAS3136 PF00224 Pyruvate kinase, barrel domain BAS3140 PF00005 ABC transporter BAS3145 PF13419 Haloacid dehalogenase-like hydrolase BAS3147 PF13350 Tyrosine phosphatase family BAS3152 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS3153 PF00480 ROK family BAS3154 PF07690 Major Facilitator Superfamily BAS3155 PF14602 Hexapeptide repeat of succinyl-transferase BAS3155 PF12464 Maltose acetyltransferase BAS3158 PF00005 ABC transporter BAS3158 PF02687 FtsX-like permease family BAS3158 PF12704 MacB-like periplasmic core domain BAS3159 PF00579 tRNA synthetases class I (W and Y) BAS3160 PF13288 DXP reductoisomerase C-terminal domain BAS3160 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BAS3160 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BAS3161 PF01594 AI-2E family transporter BAS3164 PF08241 Methyltransferase domain BAS3166 PF07690 Major Facilitator Superfamily BAS3170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS3172 PF00571 CBS domain BAS3172 PF01595 Cyclin M transmembrane N-terminal domain BAS3172 PF03471 Transporter associated domain BAS3173 PF13411 MerR HTH family regulatory protein BAS3174 PF00892 EamA-like transporter family BAS3175 PF00805 Pentapeptide repeats (8 copies) BAS3176 PF10282 Lactonase, 7-bladed beta-propeller BAS3177 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAS3177 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAS3178 PF02447 GntP family permease BAS3179 PF00923 Transaldolase/Fructose-6-phosphate aldolase BAS3180 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BAS3180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAS3181 PF02780 Transketolase, C-terminal domain BAS3181 PF02779 Transketolase, pyrimidine binding domain BAS3181 PF00456 Transketolase, thiamine diphosphate binding domain BAS3182 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BAS3182 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BAS3183 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BAS3183 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BAS3184 PF00107 Zinc-binding dehydrogenase BAS3184 PF08240 Alcohol dehydrogenase GroES-like domain BAS3185 PF00296 Luciferase-like monooxygenase BAS3186 PF14765 Polyketide synthase dehydratase BAS3186 PF00698 Acyl transferase domain BAS3186 PF00550 Phosphopantetheine attachment site BAS3186 PF08659 KR domain BAS3186 PF02801 Beta-ketoacyl synthase, C-terminal domain BAS3186 PF00109 Beta-ketoacyl synthase, N-terminal domain BAS3186 PF16197 Ketoacyl-synthetase C-terminal extension BAS3186 PF08240 Alcohol dehydrogenase GroES-like domain BAS3188 PF00106 short chain dehydrogenase BAS3189 PF02868 Thermolysin metallopeptidase, alpha-helical domain BAS3189 PF01447 Thermolysin metallopeptidase, catalytic domain BAS3189 PF03413 Peptidase propeptide and YPEB domain BAS3189 PF07504 Fungalysin/Thermolysin Propeptide Motif BAS3193 PF00248 Aldo/keto reductase family BAS3194 PF07690 Major Facilitator Superfamily BAS3196 PF03928 Haem-degrading BAS3197 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS3202 PF03960 ArsC family BAS3203 PF01638 HxlR-like helix-turn-helix BAS3204 PF07702 UTRA domain BAS3204 PF00392 Bacterial regulatory proteins, gntR family BAS3208 PF01638 HxlR-like helix-turn-helix BAS3209 PF01638 HxlR-like helix-turn-helix BAS3210 PF00248 Aldo/keto reductase family BAS3216 PF02567 Phenazine biosynthesis-like protein BAS3220 PF13193 AMP-binding enzyme C-terminal domain BAS3220 PF00501 AMP-binding enzyme BAS3223 PF01638 HxlR-like helix-turn-helix BAS3227 PF01022 Bacterial regulatory protein, arsR family BAS3230 PF12791 Anti-sigma factor N-terminus BAS3231 PF04542 Sigma-70 region 2 BAS3234 PF00440 Bacterial regulatory proteins, tetR family BAS3238 PF05656 Protein of unknown function (DUF805) BAS3239 PF01061 ABC-2 type transporter BAS3240 PF00005 ABC transporter BAS3240 PF13732 Domain of unknown function (DUF4162) BAS3243 PF03063 Prismane/CO dehydrogenase family BAS3245 PF00753 Metallo-beta-lactamase superfamily BAS3246 PF01471 Putative peptidoglycan binding domain BAS3246 PF01183 Glycosyl hydrolases family 25 BAS3251 PF00144 Beta-lactamase BAS3259 PF00753 Metallo-beta-lactamase superfamily BAS3260 PF08240 Alcohol dehydrogenase GroES-like domain BAS3260 PF00107 Zinc-binding dehydrogenase BAS3261 PF00107 Zinc-binding dehydrogenase BAS3261 PF08240 Alcohol dehydrogenase GroES-like domain BAS3262 PF00324 Amino acid permease BAS3263 PF07690 Major Facilitator Superfamily BAS3268 PF02585 GlcNAc-PI de-N-acetylase BAS3269 PF08830 Protein of unknown function (DUF1806) BAS3270 PF03600 Citrate transporter BAS3275 PF01497 Periplasmic binding protein BAS3276 PF01032 FecCD transport family BAS3277 PF01032 FecCD transport family BAS3278 PF05675 Protein of unknown function (DUF817) BAS3279 PF02567 Phenazine biosynthesis-like protein BAS3280 PF13170 Protein of unknown function (DUF4003) BAS3283 PF10901 Protein of unknown function (DUF2690) BAS3285 PF03466 LysR substrate binding domain BAS3285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS3286 PF00107 Zinc-binding dehydrogenase BAS3286 PF08240 Alcohol dehydrogenase GroES-like domain BAS3289 PF01713 Smr domain BAS3289 PF00488 MutS domain V BAS3291 PF09154 Domain of unknown function (DUF1939) BAS3291 PF00128 Alpha amylase, catalytic domain BAS3293 PF08439 Oligopeptidase F BAS3293 PF01432 Peptidase family M3 BAS3294 PF00144 Beta-lactamase BAS3296 PF07690 Major Facilitator Superfamily BAS3297 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS3297 PF03466 LysR substrate binding domain BAS3300 PF03009 Glycerophosphoryl diester phosphodiesterase family BAS3304 PF01494 FAD binding domain BAS3305 PF01022 Bacterial regulatory protein, arsR family BAS3306 PF00107 Zinc-binding dehydrogenase BAS3306 PF08240 Alcohol dehydrogenase GroES-like domain BAS3307 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BAS3311 PF04299 Putative FMN-binding domain BAS3312 PF04229 GrpB protein BAS3314 PF01758 Sodium Bile acid symporter family BAS3315 PF01565 FAD binding domain BAS3315 PF02913 FAD linked oxidases, C-terminal domain BAS3319 PF00132 Bacterial transferase hexapeptide (six repeats) BAS3320 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BAS3321 PF00535 Glycosyl transferase family 2 BAS3322 PF00378 Enoyl-CoA hydratase/isomerase BAS3323 PF18496 Collagenase G catalytic helper subdomain BAS3323 PF01752 Collagenase BAS3323 PF08453 Peptidase family M9 N-terminal BAS3324 PF02308 MgtC family BAS3326 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS3327 PF04294 VanW like protein BAS3329 PF13039 Protein of unknown function (DUF3900) BAS3329 PF13037 Domain of unknown function (DUF3898) BAS3333 PF00313 'Cold-shock' DNA-binding domain BAS3335 PF00258 Flavodoxin BAS3337 PF00293 NUDIX domain BAS3339 PF00132 Bacterial transferase hexapeptide (six repeats) BAS3341 PF00106 short chain dehydrogenase BAS3343 PF00206 Lyase BAS3343 PF14698 Argininosuccinate lyase C-terminal BAS3345 PF01156 Inosine-uridine preferring nucleoside hydrolase BAS3346 PF00474 Sodium:solute symporter family BAS3348 PF00171 Aldehyde dehydrogenase family BAS3350 PF14151 YfhD-like protein BAS3351 PF13249 Squalene-hopene cyclase N-terminal domain BAS3351 PF13243 Squalene-hopene cyclase C-terminal domain BAS3352 PF02681 Divergent PAP2 family BAS3353 PF00892 EamA-like transporter family BAS3354 PF06961 Protein of unknown function (DUF1294) BAS3357 PF10609 NUBPL iron-transfer P-loop NTPase BAS3359 PF02391 MoaE protein BAS3360 PF00994 Probable molybdopterin binding domain BAS3360 PF03454 MoeA C-terminal region (domain IV) BAS3360 PF03453 MoeA N-terminal region (domain I and II) BAS3361 PF00899 ThiF family BAS3362 PF01226 Formate/nitrite transporter BAS3363 PF04055 Radical SAM superfamily BAS3363 PF06463 Molybdenum Cofactor Synthesis C BAS3364 PF02634 FdhD/NarQ family BAS3365 PF10057 Uncharacterized conserved protein (DUF2294) BAS3366 PF07849 Protein of unknown function (DUF1641) BAS3367 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAS3367 PF00037 4Fe-4S binding domain BAS3367 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAS3367 PF00384 Molybdopterin oxidoreductase BAS3367 PF01568 Molydopterin dinucleotide binding domain BAS3369 PF03323 Bacillus/Clostridium GerA spore germination protein BAS3376 PF08241 Methyltransferase domain BAS3377 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS3378 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS3379 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS3380 PF00375 Sodium:dicarboxylate symporter family BAS3381 PF03816 Cell envelope-related transcriptional attenuator domain BAS3383 PF04542 Sigma-70 region 2 BAS3383 PF08281 Sigma-70, region 4 BAS3388 PF00005 ABC transporter BAS3388 PF13732 Domain of unknown function (DUF4162) BAS3390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAS3390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAS3391 PF03989 DNA gyrase C-terminal domain, beta-propeller BAS3391 PF00521 DNA gyrase/topoisomerase IV, subunit A BAS3392 PF01751 Toprim domain BAS3392 PF00204 DNA gyrase B BAS3392 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS3392 PF00986 DNA gyrase B subunit, carboxyl terminus BAS3394 PF13380 CoA binding domain BAS3395 PF13180 PDZ domain BAS3396 PF00072 Response regulator receiver domain BAS3396 PF00486 Transcriptional regulatory protein, C terminal BAS3398 PF03477 ATP cone domain BAS3398 PF13597 Anaerobic ribonucleoside-triphosphate reductase BAS3399 PF02660 Glycerol-3-phosphate acyltransferase BAS3400 PF01521 Iron-sulphur cluster biosynthesis BAS3401 PF03061 Thioesterase superfamily BAS3402 PF01476 LysM domain BAS3402 PF00704 Glycosyl hydrolases family 18 BAS3404 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAS3404 PF02811 PHP domain BAS3404 PF00929 Exonuclease BAS3404 PF01336 OB-fold nucleic acid binding domain BAS3404 PF11490 DNA polymerase III polC-type N-terminus II BAS3404 PF14579 Helix-hairpin-helix motif BAS3404 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAS3405 PF00578 AhpC/TSA family BAS3407 PF00664 ABC transporter transmembrane region BAS3407 PF00005 ABC transporter BAS3407 PF03412 Peptidase C39 family BAS3408 PF00330 Aconitase family (aconitate hydratase) BAS3408 PF00694 Aconitase C-terminal domain BAS3410 PF01522 Polysaccharide deacetylase BAS3413 PF07690 Major Facilitator Superfamily BAS3415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAS3415 PF01411 tRNA synthetases class II (A) BAS3415 PF02272 DHHA1 domain BAS3416 PF00293 NUDIX domain BAS3416 PF13344 Haloacid dehalogenase-like hydrolase BAS3418 PF00108 Thiolase, N-terminal domain BAS3418 PF02803 Thiolase, C-terminal domain BAS3419 PF00501 AMP-binding enzyme BAS3419 PF13193 AMP-binding enzyme C-terminal domain BAS3420 PF02632 BioY family BAS3421 PF00501 AMP-binding enzyme BAS3421 PF13193 AMP-binding enzyme C-terminal domain BAS3424 PF05532 CsbD-like BAS3430 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAS3430 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS3432 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS3432 PF13188 PAS domain BAS3432 PF00989 PAS fold BAS3432 PF00512 His Kinase A (phospho-acceptor) domain BAS3432 PF13426 PAS domain BAS3433 PF01738 Dienelactone hydrolase family BAS3434 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS3435 PF00474 Sodium:solute symporter family BAS3436 PF01645 Conserved region in glutamate synthase BAS3437 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BAS3438 PF02559 CarD-like/TRCF domain BAS3439 PF00491 Arginase family BAS3440 PF01979 Amidohydrolase family BAS3441 PF17392 Urocanase C-terminal domain BAS3441 PF17391 Urocanase N-terminal domain BAS3441 PF01175 Urocanase Rossmann-like domain BAS3442 PF00221 Aromatic amino acid lyase BAS3443 PF09021 HutP BAS3444 PF01209 ubiE/COQ5 methyltransferase family BAS3448 PF11084 Protein of unknown function (DUF2621) BAS3454 PF07301 Protein of unknown function (DUF1453) BAS3455 PF02683 Cytochrome C biogenesis protein transmembrane region BAS3457 PF03466 LysR substrate binding domain BAS3457 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS3458 PF03788 LrgA family BAS3459 PF04172 LrgB-like family BAS3460 PF00293 NUDIX domain BAS3460 PF13344 Haloacid dehalogenase-like hydrolase BAS3463 PF01510 N-acetylmuramoyl-L-alanine amidase BAS3463 PF01471 Putative peptidoglycan binding domain BAS3466 PF00005 ABC transporter BAS3466 PF00664 ABC transporter transmembrane region BAS3467 PF00664 ABC transporter transmembrane region BAS3467 PF00005 ABC transporter BAS3468 PF03672 Uncharacterised protein family (UPF0154) BAS3469 PF10747 Sporulation inhibitor of replication protein SirA BAS3470 PF02779 Transketolase, pyrimidine binding domain BAS3470 PF02780 Transketolase, C-terminal domain BAS3470 PF00456 Transketolase, thiamine diphosphate binding domain BAS3471 PF12323 Helix-turn-helix domain BAS3471 PF01385 Probable transposase BAS3471 PF07282 Putative transposase DNA-binding domain BAS3472 PF00528 Binding-protein-dependent transport system inner membrane component BAS3473 PF00528 Binding-protein-dependent transport system inner membrane component BAS3474 PF00005 ABC transporter BAS3478 PF05979 Bacterial protein of unknown function (DUF896) BAS3479 PF01726 LexA DNA binding domain BAS3479 PF00717 Peptidase S24-like BAS3480 PF00239 Resolvase, N terminal domain BAS3483 PF03551 Transcriptional regulator PadR-like family BAS3490 PF01471 Putative peptidoglycan binding domain BAS3490 PF01510 N-acetylmuramoyl-L-alanine amidase BAS3490 PF01476 LysM domain BAS3491 PF05105 Bacteriophage holin family BAS3522 PF08281 Sigma-70, region 4 BAS3530 PF02511 Thymidylate synthase complementing protein BAS3531 PF00145 C-5 cytosine-specific DNA methylase BAS3545 PF01381 Helix-turn-helix BAS3549 PF00120 Glutamine synthetase, catalytic domain BAS3549 PF03951 Glutamine synthetase, beta-Grasp domain BAS3550 PF13411 MerR HTH family regulatory protein BAS3551 PF06838 Methionine gamma-lyase BAS3552 PF01926 50S ribosome-binding GTPase BAS3552 PF16360 GTP-binding GTPase Middle Region BAS3552 PF13167 GTP-binding GTPase N-terminal BAS3553 PF13167 GTP-binding GTPase N-terminal BAS3553 PF16360 GTP-binding GTPase Middle Region BAS3553 PF01926 50S ribosome-binding GTPase BAS3554 PF03458 UPF0126 domain BAS3555 PF00004 ATPase family associated with various cellular activities (AAA) BAS3555 PF17866 AAA lid domain BAS3559 PF17209 Hfq protein BAS3562 PF01476 LysM domain BAS3562 PF06725 3D domain BAS3563 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAS3563 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAS3564 PF00294 pfkB family carbohydrate kinase BAS3565 PF08220 DeoR-like helix-turn-helix domain BAS3565 PF00455 DeoR C terminal sensor domain BAS3568 PF04238 Protein of unknown function (DUF420) BAS3570 PF00324 Amino acid permease BAS3571 PF00704 Glycosyl hydrolases family 18 BAS3571 PF00041 Fibronectin type III domain BAS3572 PF10518 TAT (twin-arginine translocation) pathway signal sequence BAS3572 PF00149 Calcineurin-like phosphoesterase BAS3573 PF01226 Formate/nitrite transporter BAS3574 PF00216 Bacterial DNA-binding protein BAS3575 PF00403 Heavy-metal-associated domain BAS3576 PF00403 Heavy-metal-associated domain BAS3577 PF02583 Metal-sensitive transcriptional repressor BAS3579 PF00756 Putative esterase BAS3580 PF00005 ABC transporter BAS3581 PF01032 FecCD transport family BAS3582 PF01032 FecCD transport family BAS3583 PF01497 Periplasmic binding protein BAS3584 PF03372 Endonuclease/Exonuclease/phosphatase family BAS3585 PF02805 Metal binding domain of Ada BAS3585 PF12833 Helix-turn-helix domain BAS3586 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BAS3586 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BAS3587 PF00730 HhH-GPD superfamily base excision DNA repair protein BAS3587 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BAS3588 PF01546 Peptidase family M20/M25/M40 BAS3588 PF07687 Peptidase dimerisation domain BAS3592 PF00561 alpha/beta hydrolase fold BAS3593 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS3594 PF03707 Bacterial signalling protein N terminal repeat BAS3594 PF00563 EAL domain BAS3594 PF00990 Diguanylate cyclase, GGDEF domain BAS3597 PF10787 Uncharacterised protein from bacillus cereus group BAS3598 PF04172 LrgB-like family BAS3599 PF03788 LrgA family BAS3600 PF00155 Aminotransferase class I and II BAS3600 PF00392 Bacterial regulatory proteins, gntR family BAS3601 PF00364 Biotin-requiring enzyme BAS3601 PF00561 alpha/beta hydrolase fold BAS3602 PF02585 GlcNAc-PI de-N-acetylase BAS3604 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BAS3605 PF00082 Subtilase family BAS3606 PF07486 Cell Wall Hydrolase BAS3607 PF03275 UDP-galactopyranose mutase BAS3608 PF00884 Sulfatase BAS3609 PF00350 Dynamin family BAS3611 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BAS3612 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS3612 PF00512 His Kinase A (phospho-acceptor) domain BAS3613 PF00486 Transcriptional regulatory protein, C terminal BAS3613 PF00072 Response regulator receiver domain BAS3616 PF00005 ABC transporter BAS3617 PF01119 DNA mismatch repair protein, C-terminal domain BAS3617 PF08676 MutL C terminal dimerisation domain BAS3618 PF05192 MutS domain III BAS3618 PF05188 MutS domain II BAS3618 PF00488 MutS domain V BAS3618 PF05190 MutS family domain IV BAS3618 PF01624 MutS domain I BAS3619 PF10628 Outer spore coat protein E (CotE) BAS3620 PF06133 Control of competence regulator ComK, YlbF/YmcA BAS3621 PF00919 Uncharacterized protein family UPF0004 BAS3621 PF01938 TRAM domain BAS3621 PF04055 Radical SAM superfamily BAS3622 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAS3623 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BAS3623 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BAS3623 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BAS3624 PF01244 Membrane dipeptidase (Peptidase family M19) BAS3625 PF04232 Stage V sporulation protein S (SpoVS) BAS3626 PF13277 YmdB-like protein BAS3627 PF01966 HD domain BAS3627 PF00013 KH domain BAS3627 PF12072 Domain of unknown function (DUF3552) BAS3630 PF02464 Competence-damaged protein BAS3630 PF00994 Probable molybdopterin binding domain BAS3630 PF18146 Damage-inducible protein CinA KH domain BAS3631 PF01066 CDP-alcohol phosphatidyltransferase BAS3632 PF13464 Domain of unknown function (DUF4115) BAS3633 PF11868 Protein of unknown function (DUF3388) BAS3634 PF11588 Protein of unknown function (DUF3243) BAS3636 PF00675 Insulinase (Peptidase family M16) BAS3636 PF05193 Peptidase M16 inactive domain BAS3637 PF05193 Peptidase M16 inactive domain BAS3638 PF02653 Branched-chain amino acid transport system / permease component BAS3642 PF00005 ABC transporter BAS3643 PF02608 ABC transporter substrate-binding protein PnrA-like BAS3644 PF07702 UTRA domain BAS3644 PF00392 Bacterial regulatory proteins, gntR family BAS3645 PF09397 Ftsk gamma domain BAS3645 PF17854 FtsK alpha domain BAS3645 PF01580 FtsK/SpoIIIE family BAS3646 PF14035 YlzJ-like protein BAS3647 PF00574 Clp protease BAS3648 PF17770 Ribonuclease J C-terminal domain BAS3648 PF00753 Metallo-beta-lactamase superfamily BAS3648 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BAS3650 PF00701 Dihydrodipicolinate synthetase family BAS3651 PF13840 ACT domain BAS3651 PF00696 Amino acid kinase family BAS3652 PF02774 Semialdehyde dehydrogenase, dimerisation domain BAS3652 PF01118 Semialdehyde dehydrogenase, NAD binding domain BAS3653 PF02441 Flavoprotein BAS3654 PF16924 Dipicolinate synthase subunit A N-terminal domain BAS3654 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BAS3655 PF05239 PRC-barrel domain BAS3656 PF05193 Peptidase M16 inactive domain BAS3656 PF00675 Insulinase (Peptidase family M16) BAS3657 PF01522 Polysaccharide deacetylase BAS3658 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BAS3658 PF00013 KH domain BAS3658 PF00575 S1 RNA binding domain BAS3658 PF03725 3' exoribonuclease family, domain 2 BAS3658 PF01138 3' exoribonuclease family, domain 1 BAS3659 PF00312 Ribosomal protein S15 BAS3660 PF06574 FAD synthetase BAS3660 PF01687 Riboflavin kinase BAS3661 PF01509 TruB family pseudouridylate synthase (N terminal domain) BAS3661 PF16198 tRNA pseudouridylate synthase B C-terminal domain BAS3662 PF02033 Ribosome-binding factor A BAS3663 PF04456 Protein of unknown function (DUF503) BAS3664 PF04760 Translation initiation factor IF-2, N-terminal region BAS3664 PF00009 Elongation factor Tu GTP binding domain BAS3664 PF11987 Translation-initiation factor 2 BAS3665 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BAS3666 PF04296 Protein of unknown function (DUF448) BAS3667 PF00575 S1 RNA binding domain BAS3667 PF13184 NusA-like KH domain BAS3667 PF08529 NusA N-terminal domain BAS3668 PF02576 RimP N-terminal domain BAS3668 PF17384 RimP C-terminal SH3 domain BAS3669 PF02811 PHP domain BAS3669 PF14579 Helix-hairpin-helix motif BAS3669 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAS3669 PF14480 DNA polymerase III polC-type N-terminus I BAS3669 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAS3669 PF11490 DNA polymerase III polC-type N-terminus II BAS3669 PF00929 Exonuclease BAS3670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAS3670 PF03129 Anticodon binding domain BAS3670 PF04073 Aminoacyl-tRNA editing domain BAS3671 PF17820 PDZ domain BAS3671 PF02163 Peptidase family M50 BAS3672 PF13288 DXP reductoisomerase C-terminal domain BAS3672 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BAS3672 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BAS3674 PF01255 Putative undecaprenyl diphosphate synthase BAS3675 PF01765 Ribosome recycling factor BAS3676 PF00696 Amino acid kinase family BAS3677 PF00889 Elongation factor TS BAS3678 PF00318 Ribosomal protein S2 BAS3679 PF08222 CodY helix-turn-helix domain BAS3679 PF06018 CodY GAF-like domain BAS3680 PF00004 ATPase family associated with various cellular activities (AAA) BAS3680 PF07724 AAA domain (Cdc48 subfamily) BAS3680 PF10431 C-terminal, D2-small domain, of ClpB protein BAS3681 PF00227 Proteasome subunit BAS3682 PF00589 Phage integrase family BAS3682 PF02899 Phage integrase, N-terminal SAM-like domain BAS3683 PF01134 Glucose inhibited division protein A BAS3684 PF01131 DNA topoisomerase BAS3684 PF01396 Topoisomerase DNA binding C4 zinc finger BAS3684 PF01751 Toprim domain BAS3686 PF00549 CoA-ligase BAS3686 PF02629 CoA binding domain BAS3687 PF00549 CoA-ligase BAS3687 PF08442 ATP-grasp domain BAS3688 PF01351 Ribonuclease HII BAS3689 PF01926 50S ribosome-binding GTPase BAS3690 PF10502 Signal peptidase, peptidase S26 BAS3691 PF01245 Ribosomal protein L19 BAS3692 PF01746 tRNA (Guanine-1)-methyltransferase BAS3693 PF01782 RimM N-terminal domain BAS3693 PF05239 PRC-barrel domain BAS3695 PF00886 Ribosomal protein S16 BAS3696 PF02881 SRP54-type protein, helical bundle domain BAS3696 PF00448 SRP54-type protein, GTPase domain BAS3696 PF02978 Signal peptide binding domain BAS3697 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BAS3698 PF00448 SRP54-type protein, GTPase domain BAS3698 PF02881 SRP54-type protein, helical bundle domain BAS3699 PF06470 SMC proteins Flexible Hinge Domain BAS3699 PF02463 RecF/RecN/SMC N terminal domain BAS3700 PF00035 Double-stranded RNA binding motif BAS3700 PF14622 Ribonuclease-III-like BAS3701 PF00550 Phosphopantetheine attachment site BAS3703 PF00698 Acyl transferase domain BAS3704 PF02504 Fatty acid synthesis protein BAS3705 PF03061 Thioesterase superfamily BAS3706 PF17191 RecG wedge domain BAS3706 PF00271 Helicase conserved C-terminal domain BAS3706 PF00270 DEAD/DEAH box helicase BAS3707 PF13684 Dihydroxyacetone kinase family BAS3707 PF02734 DAK2 domain BAS3708 PF03780 Asp23 family, cell envelope-related function BAS3709 PF00830 Ribosomal L28 family BAS3710 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BAS3710 PF04263 Thiamin pyrophosphokinase, catalytic domain BAS3711 PF00834 Ribulose-phosphate 3 epimerase family BAS3712 PF03193 RsgA GTPase BAS3712 PF16745 RsgA N-terminal domain BAS3713 PF03793 PASTA domain BAS3713 PF00069 Protein kinase domain BAS3715 PF04055 Radical SAM superfamily BAS3716 PF01029 NusB family BAS3716 PF01189 16S rRNA methyltransferase RsmB/F BAS3717 PF00551 Formyl transferase BAS3717 PF02911 Formyl transferase, C-terminal domain BAS3718 PF01327 Polypeptide deformylase BAS3719 PF17764 3′ DNA-binding domain (3′BD) BAS3719 PF04851 Type III restriction enzyme, res subunit BAS3719 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAS3719 PF18074 Primosomal protein N C-terminal domain BAS3719 PF00271 Helicase conserved C-terminal domain BAS3720 PF04127 DNA / pantothenate metabolism flavoprotein BAS3720 PF02441 Flavoprotein BAS3721 PF01192 RNA polymerase Rpb6 BAS3722 PF00625 Guanylate kinase BAS3723 PF04025 Domain of unknown function (DUF370) BAS3724 PF08340 Domain of unknown function (DUF1732) BAS3724 PF03755 YicC-like family, N-terminal region BAS3725 PF00690 Cation transporter/ATPase, N-terminus BAS3725 PF00689 Cation transporting ATPase, C-terminus BAS3726 PF05670 NFACT protein RNA binding domain BAS3727 PF01321 Creatinase/Prolidase N-terminal domain BAS3727 PF00557 Metallopeptidase family M24 BAS3733 PF00156 Phosphoribosyl transferase domain BAS3734 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BAS3735 PF01180 Dihydroorotate dehydrogenase BAS3736 PF00175 Oxidoreductase NAD-binding domain BAS3736 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BAS3737 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAS3737 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BAS3737 PF02142 MGS-like domain BAS3738 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BAS3738 PF00117 Glutamine amidotransferase class-I BAS3739 PF01979 Amidohydrolase family BAS3740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BAS3740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BAS3741 PF00860 Permease family BAS3742 PF00156 Phosphoribosyl transferase domain BAS3743 PF00849 RNA pseudouridylate synthase BAS3743 PF01479 S4 domain BAS3744 PF01252 Signal peptidase (SPase) II BAS3746 PF08264 Anticodon-binding domain of tRNA BAS3746 PF06827 Zinc finger found in FPG and IleRS BAS3746 PF00133 tRNA synthetases class I (I, L, M and V) BAS3747 PF05103 DivIVA protein BAS3748 PF01479 S4 domain BAS3748 PF17774 Putative RNA-binding domain in YlmH BAS3749 PF02325 YGGT family BAS3750 PF04472 Cell division protein SepF BAS3751 PF01168 Alanine racemase, N-terminal domain BAS3752 PF02578 Multi-copper polyphenol oxidoreductase laccase BAS3753 PF05239 PRC-barrel domain BAS3754 PF04545 Sigma-70, region 4 BAS3754 PF04539 Sigma-70 region 3 BAS3754 PF04542 Sigma-70 region 2 BAS3755 PF04545 Sigma-70, region 4 BAS3755 PF04542 Sigma-70 region 2 BAS3756 PF03419 Sporulation factor SpoIIGA BAS3757 PF00091 Tubulin/FtsZ family, GTPase domain BAS3757 PF12327 FtsZ family, C-terminal domain BAS3758 PF02491 SHS2 domain inserted in FTSA BAS3759 PF08478 POTRA domain, FtsQ-type BAS3759 PF03799 Cell division protein FtsQ BAS3760 PF01565 FAD binding domain BAS3760 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BAS3761 PF03033 Glycosyltransferase family 28 N-terminal domain BAS3761 PF04101 Glycosyltransferase family 28 C-terminal domain BAS3762 PF01098 Cell cycle protein BAS3763 PF02875 Mur ligase family, glutamate ligase domain BAS3763 PF08245 Mur ligase middle domain BAS3764 PF00953 Glycosyl transferase family 4 BAS3764 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BAS3765 PF01225 Mur ligase family, catalytic domain BAS3765 PF02875 Mur ligase family, glutamate ligase domain BAS3765 PF08245 Mur ligase middle domain BAS3766 PF00905 Penicillin binding protein transpeptidase domain BAS3766 PF03793 PASTA domain BAS3766 PF03717 Penicillin-binding Protein dimerisation domain BAS3767 PF03717 Penicillin-binding Protein dimerisation domain BAS3767 PF03793 PASTA domain BAS3767 PF00905 Penicillin binding protein transpeptidase domain BAS3768 PF04977 Septum formation initiator BAS3769 PF01795 MraW methylase family BAS3770 PF10079 Bacillithiol biosynthesis BshC BAS3771 PF02558 Ketopantoate reductase PanE/ApbA BAS3771 PF08546 Ketopantoate reductase PanE/ApbA C terminal BAS3772 PF00583 Acetyltransferase (GNAT) family BAS3774 PF01783 Ribosomal L32p protein family BAS3775 PF02620 Large ribosomal RNA subunit accumulation protein YceD BAS3784 PF12123 N-acetylmuramoyl-l-alanine amidase BAS3784 PF01510 N-acetylmuramoyl-L-alanine amidase BAS3785 PF05105 Bacteriophage holin family BAS3804 PF00574 Clp protease BAS3806 PF03354 Phage Terminase BAS3810 PF10137 Predicted nucleotide-binding protein containing TIR-like domain BAS3811 PF00589 Phage integrase family BAS3818 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS3821 PF00692 dUTPase BAS3823 PF04539 Sigma-70 region 3 BAS3823 PF04542 Sigma-70 region 2 BAS3823 PF04545 Sigma-70, region 4 BAS3827 PF07319 Primosomal protein DnaI N-terminus BAS3827 PF01695 IstB-like ATP binding protein BAS3831 PF01381 Helix-turn-helix BAS3833 PF01381 Helix-turn-helix BAS3836 PF14659 Phage integrase, N-terminal SAM-like domain BAS3836 PF00589 Phage integrase family BAS3837 PF05636 HIGH Nucleotidyl Transferase BAS3838 PF05362 Lon protease (S16) C-terminal proteolytic domain BAS3838 PF13180 PDZ domain BAS3839 PF01734 Patatin-like phospholipase BAS3840 PF07670 Nucleoside recognition BAS3841 PF01467 Cytidylyltransferase-like BAS3844 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BAS3845 PF06133 Control of competence regulator ComK, YlbF/YmcA BAS3846 PF00300 Histidine phosphatase superfamily (branch 1) BAS3847 PF14003 YlbE-like protein BAS3848 PF14071 Putative coat protein BAS3849 PF14504 CAP-associated N-terminal BAS3849 PF00188 Cysteine-rich secretory protein family BAS3850 PF08868 YugN-like family BAS3851 PF00795 Carbon-nitrogen hydrolase BAS3852 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BAS3853 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BAS3854 PF00510 Cytochrome c oxidase subunit III BAS3855 PF00115 Cytochrome C and Quinol oxidase polypeptide I BAS3856 PF00034 Cytochrome c BAS3856 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BAS3856 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BAS3857 PF01040 UbiA prenyltransferase family BAS3858 PF02628 Cytochrome oxidase assembly protein BAS3859 PF00364 Biotin-requiring enzyme BAS3859 PF02436 Conserved carboxylase domain BAS3859 PF00682 HMGL-like BAS3859 PF02785 Biotin carboxylase C-terminal domain BAS3859 PF00289 Biotin carboxylase, N-terminal domain BAS3859 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAS3860 PF01098 Cell cycle protein BAS3861 PF07408 Protein of unknown function (DUF1507) BAS3863 PF02562 PhoH-like protein BAS3863 PF13638 PIN domain BAS3865 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BAS3867 PF14036 YlaH-like protein BAS3868 PF00009 Elongation factor Tu GTP binding domain BAS3868 PF03144 Elongation factor Tu domain 2 BAS3868 PF14492 Elongation Factor G, domain II BAS3868 PF00679 Elongation factor G C-terminus BAS3870 PF00459 Inositol monophosphatase family BAS3872 PF06335 Protein of unknown function (DUF1054) BAS3873 PF05256 Uncharacterised protein family (UPF0223) BAS3874 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BAS3874 PF01276 Orn/Lys/Arg decarboxylase, major domain BAS3880 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS3880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAS3881 PF00364 Biotin-requiring enzyme BAS3881 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAS3881 PF02817 e3 binding domain BAS3882 PF02780 Transketolase, C-terminal domain BAS3882 PF02779 Transketolase, pyrimidine binding domain BAS3883 PF00676 Dehydrogenase E1 component BAS3884 PF01327 Polypeptide deformylase BAS3886 PF07288 Protein of unknown function (DUF1447) BAS3887 PF17770 Ribonuclease J C-terminal domain BAS3887 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BAS3887 PF00753 Metallo-beta-lactamase superfamily BAS3888 PF02080 TrkA-C domain BAS3888 PF02254 TrkA-N domain BAS3890 PF07687 Peptidase dimerisation domain BAS3890 PF01546 Peptidase family M20/M25/M40 BAS3891 PF00132 Bacterial transferase hexapeptide (six repeats) BAS3891 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BAS3891 PF14602 Hexapeptide repeat of succinyl-transferase BAS3892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS3892 PF03466 LysR substrate binding domain BAS3895 PF04308 Ribonuclease H-like BAS3896 PF08796 Protein of unknown function (DUF1797) BAS3899 PF10388 EAL-domain associated signalling protein domain BAS3899 PF00563 EAL domain BAS3901 PF10518 TAT (twin-arginine translocation) pathway signal sequence BAS3901 PF00149 Calcineurin-like phosphoesterase BAS3903 PF02503 Polyphosphate kinase middle domain BAS3903 PF13090 Polyphosphate kinase C-terminal domain 2 BAS3903 PF17941 Polyphosphate kinase C-terminal domain 1 BAS3903 PF13089 Polyphosphate kinase N-terminal domain BAS3904 PF02541 Ppx/GppA phosphatase family BAS3905 PF14177 YkyB-like protein BAS3910 PF07690 Major Facilitator Superfamily BAS3912 PF01717 Cobalamin-independent synthase, Catalytic domain BAS3912 PF08267 Cobalamin-independent synthase, N-terminal domain BAS3914 PF14040 Deoxyribonuclease NucA/NucB BAS3916 PF00512 His Kinase A (phospho-acceptor) domain BAS3916 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS3918 PF00155 Aminotransferase class I and II BAS3919 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAS3919 PF00356 Bacterial regulatory proteins, lacI family BAS3920 PF00528 Binding-protein-dependent transport system inner membrane component BAS3921 PF00528 Binding-protein-dependent transport system inner membrane component BAS3922 PF13416 Bacterial extracellular solute-binding protein BAS3923 PF02903 Alpha amylase, N-terminal ig-like domain BAS3923 PF16657 Maltogenic Amylase, C-terminal domain BAS3923 PF00128 Alpha amylase, catalytic domain BAS3924 PF00128 Alpha amylase, catalytic domain BAS3924 PF16657 Maltogenic Amylase, C-terminal domain BAS3925 PF03459 TOBE domain BAS3925 PF00005 ABC transporter BAS3925 PF17912 MalK OB fold domain BAS3932 PF00108 Thiolase, N-terminal domain BAS3932 PF02803 Thiolase, C-terminal domain BAS3933 PF00293 NUDIX domain BAS3940 PF03551 Transcriptional regulator PadR-like family BAS3942 PF01008 Initiation factor 2 subunit family BAS3943 PF01636 Phosphotransferase enzyme family BAS3944 PF00795 Carbon-nitrogen hydrolase BAS3945 PF00155 Aminotransferase class I and II BAS3946 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BAS3946 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BAS3948 PF00596 Class II Aldolase and Adducin N-terminal domain BAS3949 PF03079 ARD/ARD' family BAS3954 PF00990 Diguanylate cyclase, GGDEF domain BAS3954 PF08448 PAS fold BAS3955 PF00881 Nitroreductase family BAS3958 PF05524 PEP-utilising enzyme, N-terminal BAS3958 PF00391 PEP-utilising enzyme, mobile domain BAS3958 PF02896 PEP-utilising enzyme, TIM barrel domain BAS3959 PF00381 PTS HPr component phosphorylation site BAS3960 PF02378 Phosphotransferase system, EIIC BAS3960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAS3960 PF00367 phosphotransferase system, EIIB BAS3961 PF00874 PRD domain BAS3961 PF03123 CAT RNA binding domain BAS3963 PF07702 UTRA domain BAS3963 PF00392 Bacterial regulatory proteins, gntR family BAS3964 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BAS3965 PF01979 Amidohydrolase family BAS3967 PF04079 Segregation and condensation complex subunit ScpB BAS3968 PF02616 Segregation and condensation protein ScpA BAS3969 PF03745 Domain of unknown function (DUF309) BAS3970 PF00583 Acetyltransferase (GNAT) family BAS3972 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BAS3973 PF06207 Protein of unknown function (DUF1002) BAS3975 PF03323 Bacillus/Clostridium GerA spore germination protein BAS3976 PF14097 Stage V sporulation protein AE1 BAS3977 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAS3978 PF07451 Stage V sporulation protein AD (SpoVAD) BAS3979 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAS3980 PF13782 Stage V sporulation protein AB BAS3981 PF12164 Stage V sporulation protein AA BAS3982 PF00209 Sodium:neurotransmitter symporter family BAS3983 PF04545 Sigma-70, region 4 BAS3983 PF04539 Sigma-70 region 3 BAS3983 PF04542 Sigma-70 region 2 BAS3984 PF13581 Histidine kinase-like ATPase domain BAS3985 PF01740 STAS domain BAS3986 PF07943 Penicillin-binding protein 5, C-terminal domain BAS3986 PF00768 D-alanyl-D-alanine carboxypeptidase BAS3987 PF00392 Bacterial regulatory proteins, gntR family BAS3988 PF00005 ABC transporter BAS3991 PF01047 MarR family BAS3993 PF00860 Permease family BAS3994 PF01544 CorA-like Mg2+ transporter protein BAS3995 PF00591 Glycosyl transferase family, a/b domain BAS3995 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BAS3995 PF02885 Glycosyl transferase family, helical bundle domain BAS3996 PF01048 Phosphorylase superfamily BAS3997 PF01676 Metalloenzyme superfamily BAS3999 PF00589 Phage integrase family BAS3999 PF02899 Phage integrase, N-terminal SAM-like domain BAS4000 PF14004 Protein of unknown function (DUF4227) BAS4001 PF01475 Ferric uptake regulator family BAS4002 PF01944 Stage II sporulation protein M BAS4004 PF00293 NUDIX domain BAS4005 PF00248 Aldo/keto reductase family BAS4006 PF00248 Aldo/keto reductase family BAS4007 PF13673 Acetyltransferase (GNAT) domain BAS4007 PF04229 GrpB protein BAS4009 PF02872 5'-nucleotidase, C-terminal domain BAS4009 PF00746 LPXTG cell wall anchor motif BAS4009 PF00149 Calcineurin-like phosphoesterase BAS4009 PF00565 Staphylococcal nuclease homologue BAS4011 PF12146 Serine aminopeptidase, S33 BAS4012 PF03553 Na+/H+ antiporter family BAS4012 PF13726 Na+-H+ antiporter family BAS4013 PF00356 Bacterial regulatory proteins, lacI family BAS4014 PF00583 Acetyltransferase (GNAT) family BAS4015 PF12146 Serine aminopeptidase, S33 BAS4017 PF10827 Protein of unknown function (DUF2552) BAS4018 PF01872 RibD C-terminal domain BAS4018 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAS4019 PF00677 Lumazine binding domain BAS4020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BAS4020 PF00925 GTP cyclohydrolase II BAS4021 PF00885 6,7-dimethyl-8-ribityllumazine synthase BAS4023 PF06968 Biotin and Thiamin Synthesis associated domain BAS4023 PF04055 Radical SAM superfamily BAS4024 PF13847 Methyltransferase domain BAS4025 PF08241 Methyltransferase domain BAS4025 PF12697 Alpha/beta hydrolase family BAS4026 PF00155 Aminotransferase class I and II BAS4028 PF00202 Aminotransferase class-III BAS4030 PF03553 Na+/H+ antiporter family BAS4031 PF00149 Calcineurin-like phosphoesterase BAS4031 PF02872 5'-nucleotidase, C-terminal domain BAS4033 PF13404 AsnC-type helix-turn-helix domain BAS4033 PF01037 Lrp/AsnC ligand binding domain BAS4036 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BAS4036 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BAS4037 PF00202 Aminotransferase class-III BAS4038 PF00696 Amino acid kinase family BAS4039 PF01960 ArgJ family BAS4040 PF02774 Semialdehyde dehydrogenase, dimerisation domain BAS4040 PF01118 Semialdehyde dehydrogenase, NAD binding domain BAS4042 PF00106 short chain dehydrogenase BAS4045 PF03807 NADP oxidoreductase coenzyme F420-dependent BAS4045 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAS4046 PF03313 Serine dehydratase alpha chain BAS4047 PF03315 Serine dehydratase beta chain BAS4047 PF01842 ACT domain BAS4049 PF12706 Beta-lactamase superfamily domain BAS4049 PF00753 Metallo-beta-lactamase superfamily BAS4051 PF00817 impB/mucB/samB family BAS4051 PF11799 impB/mucB/samB family C-terminal domain BAS4051 PF11798 IMS family HHH motif BAS4052 PF07687 Peptidase dimerisation domain BAS4052 PF01546 Peptidase family M20/M25/M40 BAS4053 PF13302 Acetyltransferase (GNAT) domain BAS4055 PF03734 L,D-transpeptidase catalytic domain BAS4056 PF11728 Putative aromatic acid exporter C-terminal domain BAS4056 PF06081 Aromatic acid exporter family member 1 BAS4057 PF00005 ABC transporter BAS4058 PF00528 Binding-protein-dependent transport system inner membrane component BAS4059 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAS4061 PF06491 Disulphide isomerase BAS4062 PF11208 Protein of unknown function (DUF2992) BAS4063 PF09297 NADH pyrophosphatase zinc ribbon domain BAS4063 PF00293 NUDIX domain BAS4064 PF01098 Cell cycle protein BAS4065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAS4065 PF00364 Biotin-requiring enzyme BAS4065 PF02817 e3 binding domain BAS4066 PF02779 Transketolase, pyrimidine binding domain BAS4066 PF02780 Transketolase, C-terminal domain BAS4067 PF00676 Dehydrogenase E1 component BAS4068 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS4068 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAS4069 PF00871 Acetokinase family BAS4070 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BAS4070 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAS4071 PF01515 Phosphate acetyl/butaryl transferase BAS4072 PF02954 Bacterial regulatory protein, Fis family BAS4072 PF00989 PAS fold BAS4072 PF00158 Sigma-54 interaction domain BAS4074 PF03009 Glycerophosphoryl diester phosphodiesterase family BAS4076 PF00072 Response regulator receiver domain BAS4076 PF08769 Sporulation initiation factor Spo0A C terminal BAS4077 PF17820 PDZ domain BAS4077 PF05580 SpoIVB peptidase S55 BAS4078 PF13476 AAA domain BAS4079 PF02863 Arginine repressor, C-terminal domain BAS4079 PF01316 Arginine repressor, DNA binding domain BAS4080 PF01479 S4 domain BAS4080 PF01728 FtsJ-like methyltransferase BAS4081 PF02780 Transketolase, C-terminal domain BAS4081 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BAS4081 PF02779 Transketolase, pyrimidine binding domain BAS4082 PF00348 Polyprenyl synthetase BAS4083 PF02609 Exonuclease VII small subunit BAS4084 PF13742 OB-fold nucleic acid binding domain BAS4084 PF02601 Exonuclease VII, large subunit BAS4085 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BAS4085 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BAS4086 PF01029 NusB family BAS4087 PF03780 Asp23 family, cell envelope-related function BAS4088 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAS4088 PF02785 Biotin carboxylase C-terminal domain BAS4088 PF00289 Biotin carboxylase, N-terminal domain BAS4089 PF00364 Biotin-requiring enzyme BAS4090 PF12685 SpoIIIAH-like protein BAS4092 PF09581 Stage III sporulation protein AF (Spore_III_AF) BAS4093 PF09546 Stage III sporulation protein AE (spore_III_AE) BAS4094 PF06686 Stage III sporulation protein AC/AD protein family BAS4095 PF06686 Stage III sporulation protein AC/AD protein family BAS4096 PF09548 Stage III sporulation protein AB (spore_III_AB) BAS4101 PF09285 Elongation factor P, C-terminal BAS4101 PF08207 Elongation factor P (EF-P) KOW-like domain BAS4101 PF01132 Elongation factor P (EF-P) OB domain BAS4102 PF01321 Creatinase/Prolidase N-terminal domain BAS4102 PF00557 Metallopeptidase family M24 BAS4103 PF01220 Dehydroquinase class II BAS4104 PF11085 Conserved membrane protein YqhR BAS4105 PF07136 Protein of unknown function (DUF1385) BAS4107 PF13419 Haloacid dehalogenase-like hydrolase BAS4108 PF01325 Iron dependent repressor, N-terminal DNA binding domain BAS4108 PF02742 Iron dependent repressor, metal binding and dimerisation domain BAS4111 PF03099 Biotin/lipoate A/B protein ligase family BAS4112 PF00581 Rhodanese-like domain BAS4113 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAS4113 PF00356 Bacterial regulatory proteins, lacI family BAS4115 PF00893 Small Multidrug Resistance protein BAS4116 PF00893 Small Multidrug Resistance protein BAS4125 PF00005 ABC transporter BAS4126 PF00392 Bacterial regulatory proteins, gntR family BAS4129 PF02347 Glycine cleavage system P-protein BAS4130 PF02347 Glycine cleavage system P-protein BAS4131 PF08669 Glycine cleavage T-protein C-terminal barrel domain BAS4131 PF01571 Aminomethyltransferase folate-binding domain BAS4132 PF00176 SNF2 family N-terminal domain BAS4132 PF00271 Helicase conserved C-terminal domain BAS4133 PF11079 Bacterial protein YqhG of unknown function BAS4136 PF14038 YqzE-like protein BAS4137 PF01202 Shikimate kinase BAS4142 PF07963 Prokaryotic N-terminal methylation motif BAS4144 PF00482 Type II secretion system (T2SS), protein F BAS4145 PF00437 Type II/IV secretion system protein BAS4147 PF11117 Protein of unknown function (DUF2626) BAS4148 PF00375 Sodium:dicarboxylate symporter family BAS4155 PF03033 Glycosyltransferase family 28 N-terminal domain BAS4155 PF04101 Glycosyltransferase family 28 C-terminal domain BAS4156 PF02574 Homocysteine S-methyltransferase BAS4156 PF02310 B12 binding domain BAS4156 PF00809 Pterin binding enzyme BAS4156 PF02965 Vitamin B12 dependent methionine synthase, activation domain BAS4156 PF02607 B12 binding domain BAS4157 PF02219 Methylenetetrahydrofolate reductase BAS4157 PF02574 Homocysteine S-methyltransferase BAS4158 PF01053 Cys/Met metabolism PLP-dependent enzyme BAS4159 PF01053 Cys/Met metabolism PLP-dependent enzyme BAS4161 PF01022 Bacterial regulatory protein, arsR family BAS4163 PF00753 Metallo-beta-lactamase superfamily BAS4165 PF00480 ROK family BAS4166 PF06014 Bacterial protein of unknown function (DUF910) BAS4167 PF01812 5-formyltetrahydrofolate cyclo-ligase family BAS4168 PF00471 Ribosomal protein L33 BAS4169 PF00483 Nucleotidyl transferase BAS4170 PF01895 PhoU domain BAS4171 PF00005 ABC transporter BAS4172 PF00528 Binding-protein-dependent transport system inner membrane component BAS4173 PF00528 Binding-protein-dependent transport system inner membrane component BAS4174 PF12849 PBP superfamily domain BAS4175 PF03717 Penicillin-binding Protein dimerisation domain BAS4175 PF00905 Penicillin binding protein transpeptidase domain BAS4176 PF07690 Major Facilitator Superfamily BAS4177 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAS4177 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAS4180 PF04551 GcpE protein BAS4181 PF01475 Ferric uptake regulator family BAS4182 PF00950 ABC 3 transport family BAS4183 PF00005 ABC transporter BAS4184 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS4184 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAS4185 PF11116 Protein of unknown function (DUF2624) BAS4186 PF01261 Xylose isomerase-like TIM barrel BAS4187 PF00271 Helicase conserved C-terminal domain BAS4187 PF00270 DEAD/DEAH box helicase BAS4190 PF02401 LytB protein BAS4191 PF01784 NIF3 (NGG1p interacting factor 3) BAS4192 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BAS4193 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAS4194 PF00140 Sigma-70 factor, region 1.2 BAS4194 PF03979 Sigma-70 factor, region 1.1 BAS4194 PF04542 Sigma-70 region 2 BAS4194 PF04539 Sigma-70 region 3 BAS4194 PF04545 Sigma-70, region 4 BAS4195 PF08275 DNA primase catalytic core, N-terminal domain BAS4195 PF10410 DnaB-helicase binding domain of primase BAS4195 PF01807 CHC2 zinc finger BAS4196 PF03618 Kinase/pyrophosphorylase BAS4197 PF08279 HTH domain BAS4197 PF00571 CBS domain BAS4198 PF02565 Recombination protein O C terminal BAS4198 PF11967 Recombination protein O N terminal BAS4199 PF07650 KH domain BAS4199 PF01926 50S ribosome-binding GTPase BAS4200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAS4201 PF01219 Prokaryotic diacylglycerol kinase BAS4202 PF02130 Uncharacterized protein family UPF0054 BAS4203 PF07697 7TM-HD extracellular BAS4203 PF07698 7TM receptor with intracellular HD hydrolase BAS4203 PF01966 HD domain BAS4204 PF02562 PhoH-like protein BAS4205 PF06898 Putative stage IV sporulation protein YqfD BAS4206 PF07873 YabP family BAS4207 PF09424 Yqey-like protein BAS4208 PF01165 Ribosomal protein S21 BAS4209 PF01938 TRAM domain BAS4209 PF00919 Uncharacterized protein family UPF0004 BAS4209 PF04055 Radical SAM superfamily BAS4210 PF04452 RNA methyltransferase BAS4212 PF00226 DnaJ domain BAS4212 PF00684 DnaJ central domain BAS4212 PF01556 DnaJ C terminal domain BAS4213 PF00012 Hsp70 protein BAS4214 PF01025 GrpE BAS4215 PF01628 HrcA protein C terminal domain BAS4216 PF04055 Radical SAM superfamily BAS4216 PF06969 HemN C-terminal domain BAS4217 PF01638 HxlR-like helix-turn-helix BAS4218 PF06421 GTP-binding protein LepA C-terminus BAS4218 PF03144 Elongation factor Tu domain 2 BAS4218 PF00679 Elongation factor G C-terminus BAS4218 PF00009 Elongation factor Tu GTP binding domain BAS4220 PF03418 Germination protease BAS4221 PF01649 Ribosomal protein S20 BAS4222 PF06144 DNA polymerase III, delta subunit BAS4223 PF03772 Competence protein BAS4223 PF13567 Domain of unknown function (DUF4131) BAS4223 PF00753 Metallo-beta-lactamase superfamily BAS4224 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAS4225 PF03807 NADP oxidoreductase coenzyme F420-dependent BAS4225 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAS4226 PF10531 SLBB domain BAS4227 PF13649 Methyltransferase domain BAS4229 PF01966 HD domain BAS4230 PF01467 Cytidylyltransferase-like BAS4231 PF01985 CRS1 / YhbY (CRM) domain BAS4232 PF01488 Shikimate / quinate 5-dehydrogenase BAS4232 PF08501 Shikimate dehydrogenase substrate binding domain BAS4232 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BAS4233 PF01926 50S ribosome-binding GTPase BAS4235 PF02666 Phosphatidylserine decarboxylase BAS4236 PF04542 Sigma-70 region 2 BAS4236 PF04545 Sigma-70, region 4 BAS4239 PF16244 Domain of unknown function (DUF4901) BAS4240 PF00471 Ribosomal protein L33 BAS4241 PF00881 Nitroreductase family BAS4242 PF04607 Region found in RelA / SpoT proteins BAS4244 PF00245 Alkaline phosphatase BAS4246 PF08386 TAP-like protein BAS4246 PF00561 alpha/beta hydrolase fold BAS4252 PF00082 Subtilase family BAS4252 PF02225 PA domain BAS4252 PF13860 FlgD Ig-like domain BAS4252 PF05922 Peptidase inhibitor I9 BAS4253 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BAS4255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS4256 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS4257 PF07681 DoxX BAS4263 PF00005 ABC transporter BAS4264 PF01032 FecCD transport family BAS4265 PF01497 Periplasmic binding protein BAS4266 PF14143 YrhC-like protein BAS4267 PF00465 Iron-containing alcohol dehydrogenase BAS4267 PF00171 Aldehyde dehydrogenase family BAS4268 PF01053 Cys/Met metabolism PLP-dependent enzyme BAS4269 PF00291 Pyridoxal-phosphate dependent enzyme BAS4270 PF01048 Phosphorylase superfamily BAS4271 PF08241 Methyltransferase domain BAS4274 PF00905 Penicillin binding protein transpeptidase domain BAS4274 PF03717 Penicillin-binding Protein dimerisation domain BAS4275 PF03449 Transcription elongation factor, N-terminal BAS4275 PF01272 Transcription elongation factor, GreA/GreB, C-term BAS4276 PF00485 Phosphoribulokinase / Uridine kinase family BAS4277 PF01136 Peptidase family U32 BAS4277 PF16325 Peptidase family U32 C-terminal domain BAS4278 PF01136 Peptidase family U32 BAS4279 PF01596 O-methyltransferase BAS4280 PF02618 YceG-like family BAS4281 PF06949 Protein of unknown function (DUF1292) BAS4282 PF03652 Holliday junction resolvase BAS4283 PF06135 IreB regulatory phosphoprotein BAS4284 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAS4284 PF01411 tRNA synthetases class II (A) BAS4284 PF02272 DHHA1 domain BAS4286 PF01594 AI-2E family transporter BAS4289 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BAS4289 PF13538 UvrD-like helicase C-terminal domain BAS4289 PF14490 Helix-hairpin-helix containing domain BAS4292 PF00266 Aminotransferase class-V BAS4293 PF02082 Transcriptional regulator BAS4294 PF12002 MgsA AAA+ ATPase C terminal BAS4294 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAS4294 PF16193 AAA C-terminal domain BAS4296 PF00899 ThiF family BAS4297 PF01336 OB-fold nucleic acid binding domain BAS4297 PF00152 tRNA synthetases class II (D, K and N) BAS4297 PF02938 GAD domain BAS4298 PF13393 Histidyl-tRNA synthetase BAS4298 PF03129 Anticodon binding domain BAS4301 PF02580 D-Tyr-tRNA(Tyr) deacylase BAS4302 PF02824 TGS domain BAS4302 PF04607 Region found in RelA / SpoT proteins BAS4302 PF13291 ACT domain BAS4303 PF00156 Phosphoribosyl transferase domain BAS4304 PF01368 DHH family BAS4304 PF02272 DHHA1 domain BAS4304 PF17768 RecJ OB domain BAS4304 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BAS4305 PF01545 Cation efflux family BAS4305 PF16916 Dimerisation domain of Zinc Transporter BAS4306 PF07549 SecD/SecF GG Motif BAS4306 PF02355 Protein export membrane protein BAS4307 PF13797 Post-transcriptional regulator BAS4308 PF01943 Polysaccharide biosynthesis protein BAS4308 PF14667 Polysaccharide biosynthesis C-terminal domain BAS4309 PF04239 Protein of unknown function (DUF421) BAS4311 PF02699 Preprotein translocase subunit BAS4312 PF01702 Queuine tRNA-ribosyltransferase BAS4313 PF02547 Queuosine biosynthesis protein BAS4314 PF11146 Protein of unknown function (DUF2905) BAS4315 PF05491 RuvB C-terminal winged helix domain BAS4315 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAS4315 PF17864 RuvB AAA lid domain BAS4316 PF01330 RuvA N terminal domain BAS4316 PF07499 RuvA, C-terminal domain BAS4317 PF01497 Periplasmic binding protein BAS4321 PF01022 Bacterial regulatory protein, arsR family BAS4324 PF01476 LysM domain BAS4325 PF02445 Quinolinate synthetase A protein BAS4326 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BAS4326 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BAS4327 PF02910 Fumarate reductase flavoprotein C-term BAS4327 PF00890 FAD binding domain BAS4328 PF00266 Aminotransferase class-V BAS4329 PF08279 HTH domain BAS4329 PF02829 3H domain BAS4330 PF03473 MOSC domain BAS4330 PF03475 3-alpha domain BAS4331 PF01842 ACT domain BAS4331 PF00800 Prephenate dehydratase BAS4332 PF02687 FtsX-like permease family BAS4333 PF02687 FtsX-like permease family BAS4334 PF00005 ABC transporter BAS4337 PF00486 Transcriptional regulatory protein, C terminal BAS4337 PF00072 Response regulator receiver domain BAS4338 PF01018 GTP1/OBG BAS4338 PF09269 Domain of unknown function (DUF1967) BAS4338 PF01926 50S ribosome-binding GTPase BAS4339 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAS4339 PF14682 Sporulation initiation phospho-transferase B, C-terminal BAS4340 PF01016 Ribosomal L27 protein BAS4341 PF04327 Cysteine protease Prp BAS4342 PF00829 Ribosomal prokaryotic L21 protein BAS4343 PF00575 S1 RNA binding domain BAS4343 PF10150 Ribonuclease E/G family BAS4344 PF02163 Peptidase family M50 BAS4345 PF01551 Peptidase family M23 BAS4346 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BAS4347 PF03775 Septum formation inhibitor MinC, C-terminal domain BAS4349 PF04085 rod shape-determining protein MreC BAS4351 PF04002 RadC-like JAB domain BAS4352 PF02545 Maf-like protein BAS4354 PF02875 Mur ligase family, glutamate ligase domain BAS4354 PF08245 Mur ligase middle domain BAS4355 PF10458 Valyl tRNA synthetase tRNA binding arm BAS4355 PF00133 tRNA synthetases class I (I, L, M and V) BAS4355 PF08264 Anticodon-binding domain of tRNA BAS4357 PF01476 LysM domain BAS4358 PF00202 Aminotransferase class-III BAS4359 PF00490 Delta-aminolevulinic acid dehydratase BAS4360 PF02602 Uroporphyrinogen-III synthase HemD BAS4361 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BAS4361 PF03900 Porphobilinogen deaminase, C-terminal domain BAS4362 PF01578 Cytochrome C assembly protein BAS4363 PF01488 Shikimate / quinate 5-dehydrogenase BAS4363 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BAS4363 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BAS4364 PF01047 MarR family BAS4365 PF02566 OsmC-like protein BAS4366 PF01926 50S ribosome-binding GTPase BAS4367 PF05362 Lon protease (S16) C-terminal proteolytic domain BAS4367 PF02190 ATP-dependent protease La (LON) substrate-binding domain BAS4367 PF00004 ATPase family associated with various cellular activities (AAA) BAS4368 PF05362 Lon protease (S16) C-terminal proteolytic domain BAS4368 PF00004 ATPase family associated with various cellular activities (AAA) BAS4369 PF10431 C-terminal, D2-small domain, of ClpB protein BAS4369 PF07724 AAA domain (Cdc48 subfamily) BAS4369 PF06689 ClpX C4-type zinc finger BAS4370 PF05698 Bacterial trigger factor protein (TF) C-terminus BAS4370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BAS4370 PF05697 Bacterial trigger factor protein (TF) BAS4373 PF11724 YvbH-like oligomerisation region BAS4373 PF08000 Bacterial PH domain BAS4375 PF12850 Calcineurin-like phosphoesterase superfamily domain BAS4376 PF01725 Ham1 family BAS4377 PF01138 3' exoribonuclease family, domain 1 BAS4377 PF03725 3' exoribonuclease family, domain 2 BAS4378 PF10646 Sporulation and spore germination BAS4379 PF01177 Asp/Glu/Hydantoin racemase BAS4380 PF07690 Major Facilitator Superfamily BAS4382 PF00440 Bacterial regulatory proteins, tetR family BAS4385 PF00196 Bacterial regulatory proteins, luxR family BAS4386 PF00860 Permease family BAS4388 PF07969 Amidohydrolase family BAS4389 PF07969 Amidohydrolase family BAS4390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAS4391 PF00528 Binding-protein-dependent transport system inner membrane component BAS4391 PF12911 N-terminal TM domain of oligopeptide transport permease C BAS4392 PF00528 Binding-protein-dependent transport system inner membrane component BAS4393 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS4393 PF00005 ABC transporter BAS4394 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAS4394 PF00005 ABC transporter BAS4396 PF00072 Response regulator receiver domain BAS4396 PF04397 LytTr DNA-binding domain BAS4399 PF04024 PspC domain BAS4400 PF07883 Cupin domain BAS4400 PF01381 Helix-turn-helix BAS4401 PF13536 Putative multidrug resistance efflux transporter BAS4402 PF00230 Major intrinsic protein BAS4403 PF02082 Transcriptional regulator BAS4405 PF13732 Domain of unknown function (DUF4162) BAS4405 PF00005 ABC transporter BAS4406 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BAS4409 PF01618 MotA/TolQ/ExbB proton channel family BAS4410 PF02557 D-alanyl-D-alanine carboxypeptidase BAS4411 PF03061 Thioesterase superfamily BAS4412 PF13085 2Fe-2S iron-sulfur cluster binding domain BAS4412 PF13183 4Fe-4S dicluster domain BAS4413 PF00890 FAD binding domain BAS4413 PF02910 Fumarate reductase flavoprotein C-term BAS4414 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BAS4415 PF10702 Protein of unknown function (DUF2507) BAS4416 PF02151 UvrB/uvrC motif BAS4416 PF01541 GIY-YIG catalytic domain BAS4416 PF08459 UvrC Helix-hairpin-helix N-terminal BAS4417 PF00085 Thioredoxin BAS4418 PF00766 Electron transfer flavoprotein FAD-binding domain BAS4418 PF01012 Electron transfer flavoprotein domain BAS4419 PF01012 Electron transfer flavoprotein domain BAS4420 PF00378 Enoyl-CoA hydratase/isomerase BAS4421 PF08359 YsiA-like protein, C-terminal region BAS4421 PF00440 Bacterial regulatory proteins, tetR family BAS4422 PF13193 AMP-binding enzyme C-terminal domain BAS4422 PF00501 AMP-binding enzyme BAS4424 PF01497 Periplasmic binding protein BAS4425 PF01032 FecCD transport family BAS4426 PF05163 DinB family BAS4431 PF00005 ABC transporter BAS4432 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS4432 PF00512 His Kinase A (phospho-acceptor) domain BAS4433 PF00486 Transcriptional regulatory protein, C terminal BAS4433 PF00072 Response regulator receiver domain BAS4434 PF09962 Uncharacterized conserved protein (DUF2196) BAS4435 PF10672 S-adenosylmethionine-dependent methyltransferase BAS4435 PF17785 PUA-like domain BAS4437 PF03992 Antibiotic biosynthesis monooxygenase BAS4438 PF04203 Sortase domain BAS4439 PF00005 ABC transporter BAS4440 PF01032 FecCD transport family BAS4441 PF01497 Periplasmic binding protein BAS4442 PF05031 Iron Transport-associated domain BAS4444 PF05031 Iron Transport-associated domain BAS4445 PF05525 Branched-chain amino acid transport protein BAS4446 PF01479 S4 domain BAS4446 PF00849 RNA pseudouridylate synthase BAS4447 PF01713 Smr domain BAS4447 PF00488 MutS domain V BAS4448 PF14791 DNA polymerase beta thumb BAS4448 PF02811 PHP domain BAS4448 PF14716 Helix-hairpin-helix domain BAS4449 PF02674 Colicin V production protein BAS4450 PF05164 Cell division protein ZapA BAS4451 PF11858 Domain of unknown function (DUF3378) BAS4451 PF01351 Ribonuclease HII BAS4454 PF01336 OB-fold nucleic acid binding domain BAS4454 PF00152 tRNA synthetases class II (D, K and N) BAS4455 PF03483 B3/4 domain BAS4455 PF03484 tRNA synthetase B5 domain BAS4455 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BAS4455 PF03147 Ferredoxin-fold anticodon binding domain BAS4455 PF01588 Putative tRNA binding domain BAS4456 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BAS4456 PF01409 tRNA synthetases class II core domain (F) BAS4457 PF00588 SpoU rRNA Methylase family BAS4457 PF08032 RNA 2'-O ribose methyltransferase substrate binding BAS4458 PF14098 Small, acid-soluble spore protein I BAS4459 PF01966 HD domain BAS4464 PF07690 Major Facilitator Superfamily BAS4466 PF16859 Tetracyclin repressor-like, C-terminal domain BAS4466 PF00440 Bacterial regulatory proteins, tetR family BAS4467 PF05343 M42 glutamyl aminopeptidase BAS4469 PF00453 Ribosomal protein L20 BAS4470 PF01632 Ribosomal protein L35 BAS4471 PF05198 Translation initiation factor IF-3, N-terminal domain BAS4471 PF00707 Translation initiation factor IF-3, C-terminal domain BAS4472 PF03129 Anticodon binding domain BAS4472 PF02824 TGS domain BAS4472 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAS4472 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAS4473 PF08812 YtxC-like family BAS4474 PF07319 Primosomal protein DnaI N-terminus BAS4474 PF01695 IstB-like ATP binding protein BAS4475 PF07261 Replication initiation and membrane attachment BAS4476 PF03477 ATP cone domain BAS4477 PF02675 S-adenosylmethionine decarboxylase BAS4478 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAS4478 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BAS4479 PF01121 Dephospho-CoA kinase BAS4480 PF02659 Putative manganese efflux pump BAS4481 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BAS4481 PF06827 Zinc finger found in FPG and IleRS BAS4481 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BAS4482 PF00476 DNA polymerase family A BAS4482 PF01367 5'-3' exonuclease, C-terminal SAM fold BAS4482 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAS4483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS4483 PF00512 His Kinase A (phospho-acceptor) domain BAS4483 PF00989 PAS fold BAS4483 PF16736 Single Cache-like BAS4484 PF00072 Response regulator receiver domain BAS4484 PF00486 Transcriptional regulatory protein, C terminal BAS4486 PF00056 lactate/malate dehydrogenase, NAD binding domain BAS4486 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAS4487 PF00180 Isocitrate/isopropylmalate dehydrogenase BAS4488 PF00285 Citrate synthase, C-terminal domain BAS4489 PF04284 Protein of unknown function (DUF441) BAS4490 PF01594 AI-2E family transporter BAS4491 PF04186 FxsA cytoplasmic membrane protein BAS4492 PF00391 PEP-utilising enzyme, mobile domain BAS4492 PF00224 Pyruvate kinase, barrel domain BAS4492 PF02887 Pyruvate kinase, alpha/beta domain BAS4493 PF00365 Phosphofructokinase BAS4494 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BAS4495 PF01039 Carboxyl transferase domain BAS4495 PF17848 Acetyl-coA carboxylase zinc finger domain BAS4496 PF00392 Bacterial regulatory proteins, gntR family BAS4497 PF03949 Malic enzyme, NAD binding domain BAS4497 PF00390 Malic enzyme, N-terminal domain BAS4498 PF01336 OB-fold nucleic acid binding domain BAS4498 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAS4498 PF14579 Helix-hairpin-helix motif BAS4498 PF02811 PHP domain BAS4498 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAS4499 PF14034 Sporulation protein YtrH BAS4501 PF01368 DHH family BAS4501 PF02272 DHHA1 domain BAS4502 PF14007 YtpI-like protein BAS4505 PF00571 CBS domain BAS4505 PF03061 Thioesterase superfamily BAS4505 PF00392 Bacterial regulatory proteins, gntR family BAS4505 PF07085 DRTGG domain BAS4508 PF00557 Metallopeptidase family M24 BAS4508 PF01321 Creatinase/Prolidase N-terminal domain BAS4509 PF11518 Protein of unknown function (DUF3221) BAS4515 PF12746 GNAT acetyltransferase BAS4516 PF07883 Cupin domain BAS4519 PF01381 Helix-turn-helix BAS4521 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BAS4521 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BAS4523 PF00582 Universal stress protein family BAS4527 PF00206 Lyase BAS4527 PF14698 Argininosuccinate lyase C-terminal BAS4528 PF00764 Arginosuccinate synthase BAS4531 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAS4531 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS4532 PF12787 EcsC protein family BAS4535 PF00871 Acetokinase family BAS4536 PF02384 N-6 DNA Methylase BAS4537 PF08534 Redoxin BAS4538 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BAS4540 PF01513 ATP-NAD kinase BAS4541 PF07969 Amidohydrolase family BAS4543 PF00501 AMP-binding enzyme BAS4543 PF13193 AMP-binding enzyme C-terminal domain BAS4544 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAS4545 PF02568 Thiamine biosynthesis protein (ThiI) BAS4545 PF02926 THUMP domain BAS4546 PF00266 Aminotransferase class-V BAS4547 PF06160 Septation ring formation regulator, EzrA BAS4548 PF03466 LysR substrate binding domain BAS4548 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS4549 PF00892 EamA-like transporter family BAS4552 PF13185 GAF domain BAS4553 PF01053 Cys/Met metabolism PLP-dependent enzyme BAS4554 PF00163 Ribosomal protein S4/S9 N-terminal domain BAS4554 PF01479 S4 domain BAS4556 PF01479 S4 domain BAS4556 PF00579 tRNA synthetases class I (W and Y) BAS4558 PF08281 Sigma-70, region 4 BAS4558 PF04542 Sigma-70 region 2 BAS4560 PF13193 AMP-binding enzyme C-terminal domain BAS4560 PF00501 AMP-binding enzyme BAS4561 PF00583 Acetyltransferase (GNAT) family BAS4562 PF00571 CBS domain BAS4563 PF00850 Histone deacetylase domain BAS4565 PF00072 Response regulator receiver domain BAS4565 PF00486 Transcriptional regulatory protein, C terminal BAS4566 PF00672 HAMP domain BAS4566 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS4566 PF00512 His Kinase A (phospho-acceptor) domain BAS4566 PF13426 PAS domain BAS4567 PF12796 Ankyrin repeats (3 copies) BAS4568 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAS4569 PF01741 Large-conductance mechanosensitive channel, MscL BAS4575 PF00356 Bacterial regulatory proteins, lacI family BAS4576 PF07537 CamS sex pheromone cAM373 precursor BAS4577 PF11009 Protein of unknown function (DUF2847) BAS4579 PF02073 Thermophilic metalloprotease (M29) BAS4582 PF13302 Acetyltransferase (GNAT) domain BAS4583 PF08245 Mur ligase middle domain BAS4583 PF02875 Mur ligase family, glutamate ligase domain BAS4583 PF01225 Mur ligase family, catalytic domain BAS4585 PF17854 FtsK alpha domain BAS4585 PF09397 Ftsk gamma domain BAS4585 PF01580 FtsK/SpoIIIE family BAS4587 PF01588 Putative tRNA binding domain BAS4587 PF14794 Domain of unknown function (DUF4479) BAS4588 PF07285 Protein of unknown function (DUF1444) BAS4589 PF00085 Thioredoxin BAS4590 PF01931 Protein of unknown function DUF84 BAS4591 PF05343 M42 glutamyl aminopeptidase BAS4593 PF00753 Metallo-beta-lactamase superfamily BAS4594 PF02390 Putative methyltransferase BAS4595 PF14165 YtzH-like protein BAS4596 PF01636 Phosphotransferase enzyme family BAS4597 PF17999 Pullulanase N1-terminal domain BAS4597 PF00128 Alpha amylase, catalytic domain BAS4597 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BAS4598 PF02834 LigT like Phosphoesterase BAS4601 PF08220 DeoR-like helix-turn-helix domain BAS4602 PF01479 S4 domain BAS4602 PF00849 RNA pseudouridylate synthase BAS4603 PF01943 Polysaccharide biosynthesis protein BAS4603 PF14667 Polysaccharide biosynthesis C-terminal domain BAS4605 PF07690 Major Facilitator Superfamily BAS4606 PF01022 Bacterial regulatory protein, arsR family BAS4607 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BAS4609 PF10957 Sporulation protein Cse60 BAS4611 PF02559 CarD-like/TRCF domain BAS4613 PF06800 Sugar transport protein BAS4616 PF02391 MoaE protein BAS4617 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BAS4618 PF03454 MoeA C-terminal region (domain IV) BAS4618 PF03453 MoeA N-terminal region (domain I and II) BAS4618 PF00994 Probable molybdopterin binding domain BAS4619 PF01967 MoaC family BAS4620 PF00899 ThiF family BAS4626 PF00581 Rhodanese-like domain BAS4629 PF00561 alpha/beta hydrolase fold BAS4630 PF03323 Bacillus/Clostridium GerA spore germination protein BAS4631 PF03845 Spore germination protein BAS4637 PF08264 Anticodon-binding domain of tRNA BAS4637 PF13603 Leucyl-tRNA synthetase, Domain 2 BAS4637 PF09334 tRNA synthetases class I (M) BAS4637 PF00133 tRNA synthetases class I (I, L, M and V) BAS4638 PF07690 Major Facilitator Superfamily BAS4639 PF00999 Sodium/hydrogen exchanger family BAS4640 PF02080 TrkA-C domain BAS4641 PF00589 Phage integrase family BAS4643 PF00005 ABC transporter BAS4644 PF07786 Protein of unknown function (DUF1624) BAS4644 PF04235 Protein of unknown function (DUF418) BAS4645 PF10732 Protein of unknown function (DUF2524) BAS4646 PF04055 Radical SAM superfamily BAS4646 PF16199 Radical_SAM C-terminal domain BAS4647 PF06962 Putative rRNA methylase BAS4648 PF13732 Domain of unknown function (DUF4162) BAS4648 PF00005 ABC transporter BAS4650 PF01177 Asp/Glu/Hydantoin racemase BAS4653 PF10776 Protein of unknown function (DUF2600) BAS4654 PF12146 Serine aminopeptidase, S33 BAS4655 PF00132 Bacterial transferase hexapeptide (six repeats) BAS4656 PF01569 PAP2 superfamily BAS4657 PF13439 Glycosyltransferase Family 4 BAS4657 PF00534 Glycosyl transferases group 1 BAS4658 PF12804 MobA-like NTP transferase domain BAS4659 PF00994 Probable molybdopterin binding domain BAS4660 PF00438 S-adenosylmethionine synthetase, N-terminal domain BAS4660 PF02772 S-adenosylmethionine synthetase, central domain BAS4660 PF02773 S-adenosylmethionine synthetase, C-terminal domain BAS4661 PF01293 Phosphoenolpyruvate carboxykinase BAS4667 PF01784 NIF3 (NGG1p interacting factor 3) BAS4668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS4668 PF00989 PAS fold BAS4668 PF00512 His Kinase A (phospho-acceptor) domain BAS4668 PF13426 PAS domain BAS4668 PF13188 PAS domain BAS4669 PF00512 His Kinase A (phospho-acceptor) domain BAS4669 PF00989 PAS fold BAS4669 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS4669 PF08447 PAS fold BAS4670 PF00561 alpha/beta hydrolase fold BAS4670 PF08386 TAP-like protein BAS4676 PF00005 ABC transporter BAS4677 PF00528 Binding-protein-dependent transport system inner membrane component BAS4683 PF00293 NUDIX domain BAS4687 PF02664 S-Ribosylhomocysteinase (LuxS) BAS4688 PF01809 Putative membrane protein insertion efficiency factor BAS4689 PF00484 Carbonic anhydrase BAS4690 PF01654 Cytochrome bd terminal oxidase subunit I BAS4691 PF02322 Cytochrome bd terminal oxidase subunit II BAS4692 PF10676 Spore germination protein gerPA/gerPF BAS4695 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS4695 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAS4700 PF04012 PspA/IM30 family BAS4703 PF07670 Nucleoside recognition BAS4703 PF02421 Ferrous iron transport protein B BAS4703 PF17910 FeoB cytosolic helical domain BAS4703 PF07664 Ferrous iron transport protein B C terminus BAS4705 PF09515 Thiamine transporter protein (Thia_YuaJ) BAS4706 PF00672 HAMP domain BAS4706 PF00512 His Kinase A (phospho-acceptor) domain BAS4706 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS4707 PF00486 Transcriptional regulatory protein, C terminal BAS4707 PF00072 Response regulator receiver domain BAS4712 PF00156 Phosphoribosyl transferase domain BAS4713 PF00781 Diacylglycerol kinase catalytic domain BAS4717 PF00248 Aldo/keto reductase family BAS4720 PF09335 SNARE associated Golgi protein BAS4721 PF00398 Ribosomal RNA adenine dimethylase BAS4722 PF02687 FtsX-like permease family BAS4723 PF00005 ABC transporter BAS4724 PF06445 GyrI-like small molecule binding domain BAS4724 PF12833 Helix-turn-helix domain BAS4725 PF00486 Transcriptional regulatory protein, C terminal BAS4725 PF00072 Response regulator receiver domain BAS4726 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS4730 PF02687 FtsX-like permease family BAS4731 PF00005 ABC transporter BAS4735 PF02447 GntP family permease BAS4736 PF00392 Bacterial regulatory proteins, gntR family BAS4736 PF07702 UTRA domain BAS4738 PF07071 KDGP aldolase BAS4739 PF03841 L-seryl-tRNA selenium transferase BAS4740 PF01979 Amidohydrolase family BAS4743 PF02557 D-alanyl-D-alanine carboxypeptidase BAS4744 PF00512 His Kinase A (phospho-acceptor) domain BAS4744 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS4745 PF00072 Response regulator receiver domain BAS4745 PF00486 Transcriptional regulatory protein, C terminal BAS4746 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BAS4746 PF13378 Enolase C-terminal domain-like BAS4747 PF13193 AMP-binding enzyme C-terminal domain BAS4747 PF00501 AMP-binding enzyme BAS4748 PF00378 Enoyl-CoA hydratase/isomerase BAS4749 PF00561 alpha/beta hydrolase fold BAS4750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAS4750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAS4750 PF16582 Middle domain of thiamine pyrophosphate BAS4751 PF00425 chorismate binding enzyme BAS4752 PF01040 UbiA prenyltransferase family BAS4753 PF01258 Prokaryotic dksA/traR C4-type zinc finger BAS4754 PF00313 'Cold-shock' DNA-binding domain BAS4757 PF00343 Carbohydrate phosphorylase BAS4758 PF00534 Glycosyl transferases group 1 BAS4758 PF08323 Starch synthase catalytic domain BAS4759 PF00483 Nucleotidyl transferase BAS4760 PF00483 Nucleotidyl transferase BAS4761 PF00128 Alpha amylase, catalytic domain BAS4761 PF02806 Alpha amylase, C-terminal all-beta domain BAS4761 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BAS4762 PF00056 lactate/malate dehydrogenase, NAD binding domain BAS4762 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAS4764 PF02308 MgtC family BAS4765 PF02254 TrkA-N domain BAS4765 PF07885 Ion channel BAS4766 PF08868 YugN-like family BAS4767 PF00342 Phosphoglucose isomerase BAS4769 PF04070 Domain of unknown function (DUF378) BAS4770 PF00575 S1 RNA binding domain BAS4771 PF00155 Aminotransferase class I and II BAS4772 PF01037 Lrp/AsnC ligand binding domain BAS4773 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAS4773 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAS4774 PF00561 alpha/beta hydrolase fold BAS4774 PF08386 TAP-like protein BAS4776 PF00155 Aminotransferase class I and II BAS4779 PF08810 Kinase associated protein B BAS4780 PF00929 Exonuclease BAS4781 PF03600 Citrate transporter BAS4784 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAS4784 PF03129 Anticodon binding domain BAS4785 PF03061 Thioesterase superfamily BAS4787 PF02632 BioY family BAS4789 PF00483 Nucleotidyl transferase BAS4790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BAS4790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BAS4790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BAS4790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BAS4791 PF10372 Bacterial membrane-spanning protein N-terminus BAS4791 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAS4792 PF00883 Cytosol aminopeptidase family, catalytic domain BAS4792 PF02789 Cytosol aminopeptidase family, N-terminal domain BAS4793 PF06725 3D domain BAS4795 PF13344 Haloacid dehalogenase-like hydrolase BAS4795 PF00293 NUDIX domain BAS4796 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS4797 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS4799 PF06445 GyrI-like small molecule binding domain BAS4802 PF04463 Protein of unknown function (DUF523) BAS4805 PF01521 Iron-sulphur cluster biosynthesis BAS4806 PF01678 Diaminopimelate epimerase BAS4807 PF07293 Protein of unknown function (DUF1450) BAS4808 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS4810 PF09383 NIL domain BAS4810 PF00005 ABC transporter BAS4811 PF03649 Uncharacterised protein family (UPF0014) BAS4812 PF08274 PhnA Zinc-Ribbon BAS4812 PF03831 PhnA domain BAS4819 PF01909 Nucleotidyltransferase domain BAS4819 PF13427 Domain of unknown function (DUF4111) BAS4820 PF07315 Protein of unknown function (DUF1462) BAS4821 PF01106 NifU-like domain BAS4824 PF04608 Phosphatidylglycerophosphatase A BAS4826 PF02525 Flavodoxin-like fold BAS4827 PF13344 Haloacid dehalogenase-like hydrolase BAS4829 PF01934 Protein of unknown function DUF86 BAS4830 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BAS4833 PF06265 Protein of unknown function (DUF1027) BAS4834 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAS4835 PF10086 YhfC intramembrane metalloprotease BAS4836 PF07739 TipAS antibiotic-recognition domain BAS4836 PF13411 MerR HTH family regulatory protein BAS4840 PF04055 Radical SAM superfamily BAS4840 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BAS4841 PF01551 Peptidase family M23 BAS4843 PF08827 Domain of unknown function (DUF1805) BAS4844 PF02872 5'-nucleotidase, C-terminal domain BAS4845 PF03551 Transcriptional regulator PadR-like family BAS4846 PF04892 VanZ like family BAS4847 PF01458 Uncharacterized protein family (UPF0051) BAS4848 PF01592 NifU-like N terminal domain BAS4849 PF00266 Aminotransferase class-V BAS4850 PF01458 Uncharacterized protein family (UPF0051) BAS4851 PF00005 ABC transporter BAS4852 PF03180 NLPA lipoprotein BAS4853 PF03180 NLPA lipoprotein BAS4854 PF00528 Binding-protein-dependent transport system inner membrane component BAS4855 PF00005 ABC transporter BAS4855 PF09383 NIL domain BAS4857 PF00085 Thioredoxin BAS4858 PF01751 Toprim domain BAS4859 PF01597 Glycine cleavage H-protein BAS4860 PF03960 ArsC family BAS4869 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAS4869 PF00056 lactate/malate dehydrogenase, NAD binding domain BAS4873 PF13305 Tetracyclin repressor-like, C-terminal domain BAS4873 PF00440 Bacterial regulatory proteins, tetR family BAS4874 PF00753 Metallo-beta-lactamase superfamily BAS4875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAS4875 PF02770 Acyl-CoA dehydrogenase, middle domain BAS4875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAS4876 PF02803 Thiolase, C-terminal domain BAS4876 PF00108 Thiolase, N-terminal domain BAS4877 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BAS4877 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BAS4877 PF00378 Enoyl-CoA hydratase/isomerase BAS4878 PF00768 D-alanyl-D-alanine carboxypeptidase BAS4878 PF07943 Penicillin-binding protein 5, C-terminal domain BAS4879 PF01619 Proline dehydrogenase BAS4880 PF10835 Protein of unknown function (DUF2573) BAS4881 PF01910 Thiamine-binding protein BAS4882 PF02743 Cache domain BAS4882 PF00672 HAMP domain BAS4882 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS4885 PF07690 Major Facilitator Superfamily BAS4886 PF13520 Amino acid permease BAS4889 PF02096 60Kd inner membrane protein BAS4891 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAS4891 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAS4897 PF09335 SNARE associated Golgi protein BAS4899 PF17969 L,D-transpeptidase C-terminal domain BAS4899 PF03734 L,D-transpeptidase catalytic domain BAS4900 PF00486 Transcriptional regulatory protein, C terminal BAS4900 PF00072 Response regulator receiver domain BAS4901 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS4901 PF16736 Single Cache-like BAS4901 PF00512 His Kinase A (phospho-acceptor) domain BAS4901 PF00989 PAS fold BAS4903 PF09334 tRNA synthetases class I (M) BAS4903 PF08264 Anticodon-binding domain of tRNA BAS4905 PF02743 Cache domain BAS4905 PF00672 HAMP domain BAS4905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS4906 PF01883 Iron-sulfur cluster assembly protein BAS4907 PF01447 Thermolysin metallopeptidase, catalytic domain BAS4907 PF03413 Peptidase propeptide and YPEB domain BAS4907 PF07504 Fungalysin/Thermolysin Propeptide Motif BAS4907 PF02868 Thermolysin metallopeptidase, alpha-helical domain BAS4908 PF02678 Pirin BAS4908 PF17954 Quercetinase C-terminal cupin domain BAS4909 PF01047 MarR family BAS4911 PF00999 Sodium/hydrogen exchanger family BAS4912 PF02080 TrkA-C domain BAS4913 PF01235 Sodium:alanine symporter family BAS4914 PF00210 Ferritin-like domain BAS4917 PF03641 Possible lysine decarboxylase BAS4919 PF00210 Ferritin-like domain BAS4922 PF07662 Na+ dependent nucleoside transporter C-terminus BAS4922 PF01773 Na+ dependent nucleoside transporter N-terminus BAS4923 PF07662 Na+ dependent nucleoside transporter C-terminus BAS4923 PF01773 Na+ dependent nucleoside transporter N-terminus BAS4924 PF01235 Sodium:alanine symporter family BAS4925 PF01235 Sodium:alanine symporter family BAS4926 PF13460 NAD(P)H-binding BAS4931 PF00248 Aldo/keto reductase family BAS4932 PF07690 Major Facilitator Superfamily BAS4933 PF01638 HxlR-like helix-turn-helix BAS4934 PF07849 Protein of unknown function (DUF1641) BAS4935 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS4936 PF01479 S4 domain BAS4936 PF00579 tRNA synthetases class I (W and Y) BAS4937 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BAS4937 PF01565 FAD binding domain BAS4939 PF17202 Single cache domain 3 BAS4939 PF00672 HAMP domain BAS4939 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS4941 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BAS4942 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BAS4945 PF13302 Acetyltransferase (GNAT) domain BAS4946 PF06146 Phosphate-starvation-inducible E BAS4949 PF00005 ABC transporter BAS4951 PF01032 FecCD transport family BAS4952 PF01032 FecCD transport family BAS4954 PF00486 Transcriptional regulatory protein, C terminal BAS4954 PF00072 Response regulator receiver domain BAS4955 PF01668 SmpB protein BAS4956 PF00773 RNB domain BAS4956 PF00575 S1 RNA binding domain BAS4956 PF17876 Cold shock domain BAS4956 PF08206 Ribonuclease B OB domain BAS4957 PF12146 Serine aminopeptidase, S33 BAS4958 PF03840 Preprotein translocase SecG subunit BAS4959 PF04172 LrgB-like family BAS4960 PF03788 LrgA family BAS4961 PF01156 Inosine-uridine preferring nucleoside hydrolase BAS4979 PF04860 Phage portal protein BAS4984 PF00589 Phage integrase family BAS4984 PF02899 Phage integrase, N-terminal SAM-like domain BAS4985 PF00113 Enolase, C-terminal TIM barrel domain BAS4985 PF03952 Enolase, N-terminal domain BAS4986 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BAS4986 PF01676 Metalloenzyme superfamily BAS4987 PF00121 Triosephosphate isomerase BAS4988 PF00162 Phosphoglycerate kinase BAS4989 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BAS4989 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAS4990 PF04198 Putative sugar-binding domain BAS4992 PF04963 Sigma-54 factor, core binding domain BAS4992 PF00309 Sigma-54 factor, Activator interacting domain (AID) BAS4992 PF04552 Sigma-54, DNA binding domain BAS4995 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAS4996 PF07451 Stage V sporulation protein AD (SpoVAD) BAS4997 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAS4999 PF04239 Protein of unknown function (DUF421) BAS5000 PF00574 Clp protease BAS5001 PF00381 PTS HPr component phosphorylation site BAS5002 PF02650 WhiA C-terminal HTH domain BAS5002 PF14527 WhiA LAGLIDADG-like domain BAS5002 PF10298 WhiA N-terminal LAGLIDADG-like domain BAS5003 PF01933 Uncharacterised protein family UPF0052 BAS5004 PF03668 P-loop ATPase protein family BAS5005 PF00293 NUDIX domain BAS5007 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAS5009 PF14602 Hexapeptide repeat of succinyl-transferase BAS5010 PF13419 Haloacid dehalogenase-like hydrolase BAS5011 PF01790 Prolipoprotein diacylglyceryl transferase BAS5012 PF07475 HPr Serine kinase C-terminal domain BAS5012 PF02603 HPr Serine kinase N terminus BAS5013 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BAS5015 PF17760 UvrA interaction domain BAS5015 PF17755 UvrA DNA-binding domain BAS5015 PF00005 ABC transporter BAS5016 PF17757 UvrB interaction domain BAS5016 PF12344 Ultra-violet resistance protein B BAS5016 PF02151 UvrB/uvrC motif BAS5016 PF04851 Type III restriction enzyme, res subunit BAS5016 PF00271 Helicase conserved C-terminal domain BAS5017 PF01385 Probable transposase BAS5017 PF07282 Putative transposase DNA-binding domain BAS5017 PF12323 Helix-turn-helix domain BAS5020 PF07739 TipAS antibiotic-recognition domain BAS5020 PF13411 MerR HTH family regulatory protein BAS5024 PF03601 Conserved hypothetical protein 698 BAS5025 PF03466 LysR substrate binding domain BAS5025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS5026 PF13411 MerR HTH family regulatory protein BAS5027 PF03358 NADPH-dependent FMN reductase BAS5028 PF00005 ABC transporter BAS5028 PF12848 ABC transporter BAS5030 PF00005 ABC transporter BAS5030 PF00664 ABC transporter transmembrane region BAS5031 PF17820 PDZ domain BAS5032 PF01471 Putative peptidoglycan binding domain BAS5032 PF03572 Peptidase family S41 BAS5032 PF17820 PDZ domain BAS5033 PF18075 FtsX extracellular domain BAS5033 PF02687 FtsX-like permease family BAS5034 PF00005 ABC transporter BAS5035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAS5037 PF03462 PCRF domain BAS5037 PF00472 RF-1 domain BAS5038 PF02810 SEC-C motif BAS5038 PF07517 SecA DEAD-like domain BAS5038 PF07516 SecA Wing and Scaffold domain BAS5038 PF01043 SecA preprotein cross-linking domain BAS5039 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BAS5039 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BAS5040 PF00313 'Cold-shock' DNA-binding domain BAS5042 PF04851 Type III restriction enzyme, res subunit BAS5042 PF00271 Helicase conserved C-terminal domain BAS5043 PF01476 LysM domain BAS5043 PF00877 NlpC/P60 family BAS5044 PF01638 HxlR-like helix-turn-helix BAS5045 PF02645 Uncharacterised protein, DegV family COG1307 BAS5046 PF01205 Uncharacterized protein family UPF0029 BAS5046 PF09186 Domain of unknown function (DUF1949) BAS5047 PF03816 Cell envelope-related transcriptional attenuator domain BAS5048 PF02350 UDP-N-acetylglucosamine 2-epimerase BAS5049 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAS5049 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAS5049 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAS5050 PF00953 Glycosyl transferase family 4 BAS5051 PF01522 Polysaccharide deacetylase BAS5052 PF00158 Sigma-54 interaction domain BAS5052 PF00874 PRD domain BAS5052 PF03610 PTS system fructose IIA component BAS5054 PF02417 Chromate transporter BAS5055 PF04794 YdjC-like protein BAS5056 PF11975 Family 4 glycosyl hydrolase C-terminal domain BAS5056 PF02056 Family 4 glycosyl hydrolase BAS5057 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAS5058 PF02378 Phosphotransferase system, EIIC BAS5059 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAS5061 PF02675 S-adenosylmethionine decarboxylase BAS5062 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAS5063 PF02378 Phosphotransferase system, EIIC BAS5064 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAS5065 PF00375 Sodium:dicarboxylate symporter family BAS5067 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAS5069 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAS5069 PF03466 LysR substrate binding domain BAS5073 PF01654 Cytochrome bd terminal oxidase subunit I BAS5074 PF02322 Cytochrome bd terminal oxidase subunit II BAS5075 PF02040 Arsenical pump membrane protein BAS5076 PF13667 ThiC-associated domain BAS5076 PF01964 Radical SAM ThiC family BAS5077 PF02652 L-lactate permease BAS5079 PF09988 Uncharacterized metal-binding protein (DUF2227) BAS5081 PF00884 Sulfatase BAS5082 PF01063 Amino-transferase class IV BAS5085 PF07662 Na+ dependent nucleoside transporter C-terminus BAS5085 PF01773 Na+ dependent nucleoside transporter N-terminus BAS5089 PF02028 BCCT, betaine/carnitine/choline family transporter BAS5090 PF06725 3D domain BAS5090 PF01476 LysM domain BAS5095 PF04434 SWIM zinc finger BAS5096 PF00176 SNF2 family N-terminal domain BAS5096 PF00271 Helicase conserved C-terminal domain BAS5096 PF12419 SNF2 Helicase protein BAS5102 PF04542 Sigma-70 region 2 BAS5102 PF04545 Sigma-70, region 4 BAS5103 PF04893 Yip1 domain BAS5104 PF12704 MacB-like periplasmic core domain BAS5104 PF02687 FtsX-like permease family BAS5105 PF00005 ABC transporter BAS5109 PF07690 Major Facilitator Superfamily BAS5112 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS5112 PF00989 PAS fold BAS5112 PF00512 His Kinase A (phospho-acceptor) domain BAS5112 PF16736 Single Cache-like BAS5113 PF00486 Transcriptional regulatory protein, C terminal BAS5113 PF00072 Response regulator receiver domain BAS5114 PF16363 GDP-mannose 4,6 dehydratase BAS5115 PF03816 Cell envelope-related transcriptional attenuator domain BAS5116 PF07977 FabA-like domain BAS5117 PF02350 UDP-N-acetylglucosamine 2-epimerase BAS5118 PF00005 ABC transporter BAS5118 PF08239 Bacterial SH3 domain BAS5119 PF01061 ABC-2 type transporter BAS5120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAS5120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAS5120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAS5129 PF12116 Stage III sporulation protein D BAS5131 PF01551 Peptidase family M23 BAS5133 PF00005 ABC transporter BAS5134 PF04397 LytTr DNA-binding domain BAS5134 PF00072 Response regulator receiver domain BAS5135 PF00005 ABC transporter BAS5136 PF08486 Stage II sporulation protein BAS5137 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAS5139 PF06612 Protein of unknown function (DUF1146) BAS5140 PF00361 Proton-conducting membrane transporter BAS5141 PF00361 Proton-conducting membrane transporter BAS5142 PF00361 Proton-conducting membrane transporter BAS5142 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BAS5142 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BAS5143 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BAS5144 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BAS5146 PF00146 NADH dehydrogenase BAS5147 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BAS5148 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BAS5149 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BAS5150 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BAS5151 PF03707 Bacterial signalling protein N terminal repeat BAS5151 PF00563 EAL domain BAS5151 PF00990 Diguanylate cyclase, GGDEF domain BAS5154 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BAS5154 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BAS5155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAS5155 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAS5156 PF00231 ATP synthase BAS5157 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAS5157 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAS5157 PF00306 ATP synthase alpha/beta chain, C terminal domain BAS5158 PF00213 ATP synthase delta (OSCP) subunit BAS5159 PF00430 ATP synthase B/B' CF(0) BAS5160 PF00137 ATP synthase subunit C BAS5161 PF00119 ATP synthase A chain BAS5162 PF03899 ATP synthase I chain BAS5165 PF00464 Serine hydroxymethyltransferase BAS5166 PF04260 Protein of unknown function (DUF436) BAS5167 PF02502 Ribose/Galactose Isomerase BAS5168 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAS5169 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAS5170 PF07681 DoxX BAS5171 PF01613 Flavin reductase like domain BAS5173 PF02659 Putative manganese efflux pump BAS5174 PF03481 Putative GTP-binding controlling metal-binding BAS5174 PF01300 Telomere recombination BAS5176 PF09551 Stage II sporulation protein R (spore_II_R) BAS5177 PF13847 Methyltransferase domain BAS5177 PF17827 PrmC N-terminal domain BAS5178 PF03462 PCRF domain BAS5178 PF00472 RF-1 domain BAS5179 PF00265 Thymidine kinase BAS5180 PF01197 Ribosomal protein L31 BAS5181 PF07498 Rho termination factor, N-terminal domain BAS5181 PF07497 Rho termination factor, RNA-binding domain BAS5181 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAS5182 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BAS5183 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAS5184 PF01116 Fructose-bisphosphate aldolase class-II BAS5185 PF00072 Response regulator receiver domain BAS5186 PF10740 Domain of unknown function (DUF2529) BAS5187 PF06418 CTP synthase N-terminus BAS5187 PF00117 Glutamine amidotransferase class-I BAS5188 PF05066 HB1, ASXL, restriction endonuclease HTH domain BAS5190 PF02770 Acyl-CoA dehydrogenase, middle domain BAS5190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAS5190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAS5191 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAS5191 PF02770 Acyl-CoA dehydrogenase, middle domain BAS5191 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAS5192 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BAS5192 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BAS5193 PF00108 Thiolase, N-terminal domain BAS5193 PF02803 Thiolase, C-terminal domain BAS5194 PF13183 4Fe-4S dicluster domain BAS5194 PF02754 Cysteine-rich domain BAS5195 PF13091 PLD-like domain BAS5196 PF03851 UV-endonuclease UvdE BAS5197 PF00990 Diguanylate cyclase, GGDEF domain BAS5197 PF00563 EAL domain BAS5197 PF03707 Bacterial signalling protein N terminal repeat BAS5200 PF00196 Bacterial regulatory proteins, luxR family BAS5200 PF00072 Response regulator receiver domain BAS5201 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS5201 PF07730 Histidine kinase BAS5203 PF00005 ABC transporter BAS5204 PF00557 Metallopeptidase family M24 BAS5208 PF02225 PA domain BAS5208 PF04389 Peptidase family M28 BAS5212 PF04542 Sigma-70 region 2 BAS5212 PF08281 Sigma-70, region 4 BAS5213 PF00750 tRNA synthetases class I (R) BAS5213 PF03485 Arginyl tRNA synthetase N terminal domain BAS5213 PF05746 DALR anticodon binding domain BAS5214 PF09148 Domain of unknown function (DUF1934) BAS5215 PF17676 LD-carboxypeptidase C-terminal domain BAS5215 PF02016 LD-carboxypeptidase N-terminal domain BAS5218 PF00491 Arginase family BAS5219 PF17284 Spermidine synthase tetramerisation domain BAS5220 PF07690 Major Facilitator Superfamily BAS5221 PF13411 MerR HTH family regulatory protein BAS5222 PF03009 Glycerophosphoryl diester phosphodiesterase family BAS5223 PF00912 Transglycosylase BAS5223 PF00905 Penicillin binding protein transpeptidase domain BAS5224 PF08741 YwhD family BAS5225 PF02163 Peptidase family M50 BAS5226 PF01361 Tautomerase enzyme BAS5228 PF01966 HD domain BAS5229 PF01497 Periplasmic binding protein BAS5230 PF00005 ABC transporter BAS5231 PF01032 FecCD transport family BAS5234 PF07293 Protein of unknown function (DUF1450) BAS5237 PF03099 Biotin/lipoate A/B protein ligase family BAS5238 PF01515 Phosphate acetyl/butaryl transferase BAS5239 PF06778 Chlorite dismutase BAS5240 PF00768 D-alanyl-D-alanine carboxypeptidase BAS5240 PF07943 Penicillin-binding protein 5, C-terminal domain BAS5241 PF07486 Cell Wall Hydrolase BAS5242 PF09671 Spore coat protein (Spore_GerQ) BAS5243 PF04241 Protein of unknown function (DUF423) BAS5247 PF00860 Permease family BAS5249 PF12823 Domain of unknown function (DUF3817) BAS5250 PF03167 Uracil DNA glycosylase superfamily BAS5251 PF12679 ABC-2 family transporter protein BAS5252 PF00005 ABC transporter BAS5253 PF13472 GDSL-like Lipase/Acylhydrolase family BAS5254 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAS5254 PF00356 Bacterial regulatory proteins, lacI family BAS5256 PF01842 ACT domain BAS5256 PF03447 Homoserine dehydrogenase, NAD binding domain BAS5256 PF00742 Homoserine dehydrogenase BAS5257 PF04204 Homoserine O-succinyltransferase BAS5258 PF01053 Cys/Met metabolism PLP-dependent enzyme BAS5260 PF13419 Haloacid dehalogenase-like hydrolase BAS5261 PF00027 Cyclic nucleotide-binding domain BAS5262 PF02525 Flavodoxin-like fold BAS5263 PF00072 Response regulator receiver domain BAS5263 PF00196 Bacterial regulatory proteins, luxR family BAS5266 PF08543 Phosphomethylpyrimidine kinase BAS5267 PF00990 Diguanylate cyclase, GGDEF domain BAS5267 PF07694 5TMR of 5TMR-LYT BAS5268 PF04328 Selenoprotein, putative BAS5269 PF13722 5TM C-terminal transporter carbon starvation CstA BAS5269 PF02554 Carbon starvation protein CstA BAS5270 PF00072 Response regulator receiver domain BAS5270 PF04397 LytTr DNA-binding domain BAS5271 PF07690 Major Facilitator Superfamily BAS5272 PF03808 Glycosyl transferase WecB/TagA/CpsF family BAS5275 PF03458 UPF0126 domain BAS5276 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAS5278 PF03061 Thioesterase superfamily BAS5280 PF00535 Glycosyl transferase family 2 BAS5281 PF12848 ABC transporter BAS5281 PF00005 ABC transporter BAS5287 PF00535 Glycosyl transferase family 2 BAS5288 PF00440 Bacterial regulatory proteins, tetR family BAS5289 PF00873 AcrB/AcrD/AcrF family BAS5290 PF01625 Peptide methionine sulfoxide reductase BAS5290 PF01641 SelR domain BAS5291 PF01594 AI-2E family transporter BAS5293 PF04172 LrgB-like family BAS5294 PF03788 LrgA family BAS5295 PF04397 LytTr DNA-binding domain BAS5295 PF00072 Response regulator receiver domain BAS5296 PF13492 GAF domain BAS5296 PF06580 Histidine kinase BAS5296 PF07694 5TMR of 5TMR-LYT BAS5296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS5297 PF07690 Major Facilitator Superfamily BAS5298 PF02028 BCCT, betaine/carnitine/choline family transporter BAS5299 PF02898 Nitric oxide synthase, oxygenase domain BAS5300 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAS5300 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAS5302 PF02293 AmiS/UreI family transporter BAS5304 PF16363 GDP-mannose 4,6 dehydratase BAS5305 PF03006 Haemolysin-III related BAS5307 PF00271 Helicase conserved C-terminal domain BAS5307 PF00270 DEAD/DEAH box helicase BAS5307 PF03880 DbpA RNA binding domain BAS5309 PF00478 IMP dehydrogenase / GMP reductase domain BAS5310 PF01432 Peptidase family M3 BAS5310 PF08439 Oligopeptidase F BAS5312 PF02590 Predicted SPOUT methyltransferase BAS5314 PF13180 PDZ domain BAS5315 PF00753 Metallo-beta-lactamase superfamily BAS5316 PF09648 YycH protein BAS5317 PF07435 YycH protein BAS5318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAS5318 PF13426 PAS domain BAS5318 PF00512 His Kinase A (phospho-acceptor) domain BAS5318 PF00672 HAMP domain BAS5319 PF00072 Response regulator receiver domain BAS5319 PF00486 Transcriptional regulatory protein, C terminal BAS5320 PF00709 Adenylosuccinate synthetase BAS5321 PF00772 DnaB-like helicase N terminal domain BAS5321 PF03796 DnaB-like helicase C terminal domain BAS5322 PF03948 Ribosomal protein L9, C-terminal domain BAS5322 PF01281 Ribosomal protein L9, N-terminal domain BAS5323 PF02272 DHHA1 domain BAS5323 PF01368 DHH family BAS5324 PF09991 Predicted membrane protein (DUF2232) BAS5325 PF01084 Ribosomal protein S18 BAS5326 PF00436 Single-strand binding protein family BAS5327 PF01250 Ribosomal protein S6 BAS5328 PF01926 50S ribosome-binding GTPase BAS5328 PF06071 Protein of unknown function (DUF933) BAS5329 PF06107 Bacterial protein of unknown function (DUF951) BAS5330 PF00924 Mechanosensitive ion channel BAS5331 PF06866 Protein of unknown function (DUF1256) BAS5332 PF17762 HTH domain found in ParB protein BAS5332 PF02195 ParB-like nuclease domain BAS5333 PF13614 AAA domain BAS5334 PF17762 HTH domain found in ParB protein BAS5334 PF02195 ParB-like nuclease domain BAS5335 PF02527 rRNA small subunit methyltransferase G BAS5336 PF01134 Glucose inhibited division protein A BAS5336 PF13932 GidA associated domain BAS5337 PF01926 50S ribosome-binding GTPase BAS5337 PF12631 MnmE helical domain BAS5337 PF10396 GTP-binding protein TrmE N-terminus BAS5338 PF01424 R3H domain BAS5338 PF14804 Jag N-terminus BAS5339 PF02096 60Kd inner membrane protein BAS5340 PF00825 Ribonuclease P BAS5341 PF00468 Ribosomal protein L34 BAS6002 PF08177 Small acid-soluble spore protein N family