AK39_RS00855	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AK39_RS00875	SM01192	AK39_RS00875
AK39_RS00875	SM01193	AK39_RS00875
AK39_RS00910	SM00507	HNH nucleases
AK39_RS01020	SM00316	Ribosomal protein S1-like RNA-binding domain
AK39_RS01020	SM00357	Cold shock protein domain
AK39_RS01020	SM00955	AK39_RS01020
AK39_RS01030	SM00448	cheY-homologous receiver domain
AK39_RS01030	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS01050	SM00382	ATPases associated with a variety of cellular activities
AK39_RS01100	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS01105	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
AK39_RS01115	SM00363	S4 RNA-binding domain
AK39_RS01245	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS01265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS01265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS01285	SM00387	Histidine kinase-like ATPases
AK39_RS01285	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS01290	SM00448	cheY-homologous receiver domain
AK39_RS01290	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS01315	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS01385	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS01385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS01435	SM00849	Metallo-beta-lactamase superfamily
AK39_RS01525	SM00493	AK39_RS01525
AK39_RS01545	SM00382	ATPases associated with a variety of cellular activities
AK39_RS01545	SM00930	AK39_RS01545
AK39_RS01565	SM00382	ATPases associated with a variety of cellular activities
AK39_RS01630	SM00729	Elongator protein 3, MiaB family, Radical SAM
AK39_RS01640	SM00855	Phosphoglycerate mutase family
AK39_RS01655	SM00422	helix_turn_helix, mercury resistance
AK39_RS01695	SM00420	helix_turn_helix, Deoxyribose operon repressor
AK39_RS01765	SM00860	SMI1 / KNR4 family
AK39_RS01790	SM00382	ATPases associated with a variety of cellular activities
AK39_RS01850	SM00871	Bacterial transcription activator, effector binding domain
AK39_RS01945	SM00479	AK39_RS01945
AK39_RS01950	SM01298	AK39_RS01950
AK39_RS01985	SM00344	helix_turn_helix ASNC type
AK39_RS01995	SM00316	Ribosomal protein S1-like RNA-binding domain
AK39_RS02160	SM00642	Alpha-amylase domain
AK39_RS02200	SM00357	Cold shock protein domain
AK39_RS02240	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AK39_RS02245	SM00448	cheY-homologous receiver domain
AK39_RS02245	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS02250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS02250	SM00387	Histidine kinase-like ATPases
AK39_RS02250	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS02290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS02290	SM00866	AK39_RS02290
AK39_RS02310	SM00382	ATPases associated with a variety of cellular activities
AK39_RS02335	SM00387	Histidine kinase-like ATPases
AK39_RS02340	SM00448	cheY-homologous receiver domain
AK39_RS02340	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS02345	SM00342	helix_turn_helix, arabinose operon control protein
AK39_RS02345	SM00871	Bacterial transcription activator, effector binding domain
AK39_RS02350	SM00382	ATPases associated with a variety of cellular activities
AK39_RS02400	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AK39_RS02430	SM00448	cheY-homologous receiver domain
AK39_RS02430	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS02435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS02435	SM00387	Histidine kinase-like ATPases
AK39_RS02435	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS02445	SM00899	AK39_RS02445
AK39_RS02505	SM00894	Excalibur calcium-binding domain
AK39_RS02525	SM00947	Carbonic anhydrase
AK39_RS02530	SM01234	AK39_RS02530
AK39_RS02585	SM00382	ATPases associated with a variety of cellular activities
AK39_RS02615	SM00387	Histidine kinase-like ATPases
AK39_RS02615	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS02620	SM00387	Histidine kinase-like ATPases
AK39_RS02680	SM00852	Probable molybdopterin binding domain
AK39_RS02695	SM00014	Acid phosphatase homologues
AK39_RS02735	SM00382	ATPases associated with a variety of cellular activities
AK39_RS02745	SM00729	Elongator protein 3, MiaB family, Radical SAM
AK39_RS02765	SM00382	ATPases associated with a variety of cellular activities
AK39_RS02845	SM00450	Rhodanese Homology Domain
AK39_RS02880	SM00852	Probable molybdopterin binding domain
AK39_RS02915	SM01058	CarD-like/TRCF domain
AK39_RS02940	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS02960	SM00363	S4 RNA-binding domain
AK39_RS02965	SM00420	helix_turn_helix, Deoxyribose operon repressor
AK39_RS02990	SM00642	Alpha-amylase domain
AK39_RS03010	SM00849	Metallo-beta-lactamase superfamily
AK39_RS03050	SM00843	AK39_RS03050
AK39_RS03110	SM00354	helix_turn _helix lactose operon repressor
AK39_RS03145	SM00248	ankyrin repeats
AK39_RS03150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS03150	SM00387	Histidine kinase-like ATPases
AK39_RS03150	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS03155	SM00448	cheY-homologous receiver domain
AK39_RS03155	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS03170	SM00116	Domain in cystathionine beta-synthase and other proteins.
AK39_RS03200	SM00363	S4 RNA-binding domain
AK39_RS03215	SM00363	S4 RNA-binding domain
AK39_RS03215	SM01390	AK39_RS03215
AK39_RS03255	SM00981	AK39_RS03255
AK39_RS03375	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AK39_RS03375	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AK39_RS03385	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS03440	SM00849	Metallo-beta-lactamase superfamily
AK39_RS03450	SM00116	Domain in cystathionine beta-synthase and other proteins.
AK39_RS03485	SM00481	DNA polymerase alpha chain like domain
AK39_RS03490	SM00919	Malic enzyme, NAD binding domain
AK39_RS03490	SM01274	AK39_RS03490
AK39_RS03495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS03545	SM01329	AK39_RS03545
AK39_RS03565	SM00448	cheY-homologous receiver domain
AK39_RS03565	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS03570	SM00091	PAS domain
AK39_RS03570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS03570	SM00387	Histidine kinase-like ATPases
AK39_RS03570	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS03575	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AK39_RS03575	SM00474	3'-5' exonuclease
AK39_RS03575	SM00475	5'-3' exonuclease
AK39_RS03575	SM00482	DNA polymerase A domain
AK39_RS03580	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AK39_RS03580	SM01232	AK39_RS03580
AK39_RS03595	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AK39_RS03620	SM00382	ATPases associated with a variety of cellular activities
AK39_RS03630	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AK39_RS03705	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AK39_RS03715	SM00873	B3/4 domain
AK39_RS03715	SM00874	tRNA synthetase B5 domain
AK39_RS03715	SM00896	Ferredoxin-fold anticodon binding domain
AK39_RS03755	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AK39_RS03755	SM00481	DNA polymerase alpha chain like domain
AK39_RS03755	SM00483	DNA polymerase X family
AK39_RS03760	SM00463	Small MutS-related domain
AK39_RS03760	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AK39_RS03760	SM00534	ATPase domain of DNA mismatch repair MUTS family
AK39_RS03770	SM00363	S4 RNA-binding domain
AK39_RS03780	SM00725	NEAr Transporter domain
AK39_RS03785	SM00725	NEAr Transporter domain
AK39_RS03790	SM00725	NEAr Transporter domain
AK39_RS03805	SM00382	ATPases associated with a variety of cellular activities
AK39_RS03825	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AK39_RS03840	SM00448	cheY-homologous receiver domain
AK39_RS03840	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS03845	SM00387	Histidine kinase-like ATPases
AK39_RS03845	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS03850	SM00382	ATPases associated with a variety of cellular activities
AK39_RS03915	SM00893	Electron transfer flavoprotein domain
AK39_RS03920	SM00893	Electron transfer flavoprotein domain
AK39_RS03930	SM00465	GIY-YIG type nucleases (URI domain)
AK39_RS03980	SM00382	ATPases associated with a variety of cellular activities
AK39_RS04005	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS04025	SM00342	helix_turn_helix, arabinose operon control protein
AK39_RS04025	SM00448	cheY-homologous receiver domain
AK39_RS04035	SM00382	ATPases associated with a variety of cellular activities
AK39_RS04040	SM00382	ATPases associated with a variety of cellular activities
AK39_RS04080	SM00421	helix_turn_helix, Lux Regulon
AK39_RS04115	SM00909	Sporulation and spore germination
AK39_RS04175	SM00382	ATPases associated with a variety of cellular activities
AK39_RS04175	SM00994	ClpX C4-type zinc finger
AK39_RS04175	SM01086	C-terminal, D2-small domain, of ClpB protein
AK39_RS04180	SM00382	ATPases associated with a variety of cellular activities
AK39_RS04185	SM00382	ATPases associated with a variety of cellular activities
AK39_RS04185	SM00464	Found in ATP-dependent protease La (LON)
AK39_RS04200	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS04225	SM01004	Delta-aminolevulinic acid dehydratase
AK39_RS04235	SM00257	Lysin motif
AK39_RS04325	SM01317	AK39_RS04325
AK39_RS04335	SM00448	cheY-homologous receiver domain
AK39_RS04335	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS04345	SM00387	Histidine kinase-like ATPases
AK39_RS04350	SM00382	ATPases associated with a variety of cellular activities
AK39_RS04400	SM00257	Lysin motif
AK39_RS04415	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS04440	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AK39_RS04445	SM00382	ATPases associated with a variety of cellular activities
AK39_RS04465	SM01323	AK39_RS04465
AK39_RS04510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AK39_RS04510	SM00954	Region found in RelA / SpoT proteins
AK39_RS04545	SM00382	ATPases associated with a variety of cellular activities
AK39_RS04565	SM00028	Tetratricopeptide repeats
AK39_RS04600	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AK39_RS04610	SM00732	Likely ribonuclease with RNase H fold.
AK39_RS04705	SM00382	ATPases associated with a variety of cellular activities
AK39_RS04730	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS04780	SM00855	Phosphoglycerate mutase family
AK39_RS04805	SM00098	Alkaline phosphatase homologues
AK39_RS04815	SM00954	Region found in RelA / SpoT proteins
AK39_RS04870	SM01103	AK39_RS04870
AK39_RS04880	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AK39_RS04900	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AK39_RS04940	SM00838	Elongation factor G C-terminus
AK39_RS04950	SM00729	Elongator protein 3, MiaB family, Radical SAM
AK39_RS04970	SM00271	DnaJ molecular chaperone homology domain
AK39_RS04985	SM00729	Elongator protein 3, MiaB family, Radical SAM
AK39_RS05020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AK39_RS05055	SM00116	Domain in cystathionine beta-synthase and other proteins.
AK39_RS05075	SM00400	zinc finger
AK39_RS05075	SM00493	AK39_RS05075
AK39_RS05075	SM00766	DNA primase DnaG DnaB-binding
AK39_RS05110	SM00487	DEAD-like helicases superfamily
AK39_RS05110	SM00490	helicase superfamily c-terminal domain
AK39_RS05115	SM00518	AP endonuclease family 2
AK39_RS05130	SM00382	ATPases associated with a variety of cellular activities
AK39_RS05195	SM00382	ATPases associated with a variety of cellular activities
AK39_RS05235	SM00849	Metallo-beta-lactamase superfamily
AK39_RS05245	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS05280	SM01018	B12 binding domain
AK39_RS05335	SM00382	ATPases associated with a variety of cellular activities
AK39_RS05370	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AK39_RS05405	SM00487	DEAD-like helicases superfamily
AK39_RS05405	SM00490	helicase superfamily c-terminal domain
AK39_RS05435	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS05440	SM00382	ATPases associated with a variety of cellular activities
AK39_RS05495	SM00354	helix_turn _helix lactose operon repressor
AK39_RS05500	SM00450	Rhodanese Homology Domain
AK39_RS05520	SM00529	Helix-turn-helix diphteria tox regulatory element
AK39_RS05555	SM00841	Elongation factor P, C-terminal
AK39_RS05555	SM01185	AK39_RS05555
AK39_RS05575	SM00382	ATPases associated with a variety of cellular activities
AK39_RS05625	SM00878	Biotin carboxylase C-terminal domain
AK39_RS05660	SM00861	Transketolase, pyrimidine binding domain
AK39_RS05665	SM00363	S4 RNA-binding domain
AK39_RS05680	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AK39_RS05685	SM00448	cheY-homologous receiver domain
AK39_RS05710	SM00091	PAS domain
AK39_RS05710	SM00382	ATPases associated with a variety of cellular activities
AK39_RS05725	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AK39_RS05745	SM00861	Transketolase, pyrimidine binding domain
AK39_RS05785	SM00062	Bacterial periplasmic substrate-binding proteins
AK39_RS05785	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AK39_RS05795	SM00382	ATPases associated with a variety of cellular activities
AK39_RS05845	SM00849	Metallo-beta-lactamase superfamily
AK39_RS05890	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AK39_RS05925	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS05975	SM00729	Elongator protein 3, MiaB family, Radical SAM
AK39_RS05975	SM00876	Biotin and Thiamin Synthesis associated domain
AK39_RS06005	SM00704	CDGSH-type zinc finger. Function unknown.
AK39_RS06025	SM00354	helix_turn _helix lactose operon repressor
AK39_RS06120	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AK39_RS06140	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS06160	SM00382	ATPases associated with a variety of cellular activities
AK39_RS06165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS06170	SM00936	Penicillin-binding protein 5, C-terminal domain 
AK39_RS06180	SM00387	Histidine kinase-like ATPases
AK39_RS06285	SM00849	Metallo-beta-lactamase superfamily
AK39_RS06300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS06300	SM00866	AK39_RS06300
AK39_RS06310	SM01061	CAT RNA binding domain
AK39_RS06345	SM00267	diguanylate cyclase
AK39_RS06370	SM01007	Class II Aldolase and Adducin N-terminal domain
AK39_RS06460	SM00382	ATPases associated with a variety of cellular activities
AK39_RS06495	SM00382	ATPases associated with a variety of cellular activities
AK39_RS06500	SM00642	Alpha-amylase domain
AK39_RS06505	SM00642	Alpha-amylase domain
AK39_RS06525	SM00354	helix_turn _helix lactose operon repressor
AK39_RS06540	SM00387	Histidine kinase-like ATPases
AK39_RS06540	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS06590	SM00267	diguanylate cyclase
AK39_RS06635	SM00052	Putative diguanylate phosphodiesterase
AK39_RS06700	SM00849	Metallo-beta-lactamase superfamily
AK39_RS06730	SM00861	Transketolase, pyrimidine binding domain
AK39_RS06810	SM00838	Elongation factor G C-terminus
AK39_RS06835	SM00670	Large family of predicted nucleotide-binding domains
AK39_RS06855	SM00878	Biotin carboxylase C-terminal domain
AK39_RS06920	SM00855	Phosphoglycerate mutase family
AK39_RS06960	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AK39_RS06985	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS06995	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS07000	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS07025	SM00382	ATPases associated with a variety of cellular activities
AK39_RS07100	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS07145	SM00507	HNH nucleases
AK39_RS07255	SM00644	AK39_RS07255
AK39_RS07270	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS07310	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
AK39_RS07340	SM00740	AK39_RS07340
AK39_RS07345	SM00740	AK39_RS07345
AK39_RS07385	SM00842	Cell division protein FtsA
AK39_RS07390	SM00864	Tubulin/FtsZ family, GTPase domain
AK39_RS07390	SM00865	Tubulin/FtsZ family, C-terminal domain
AK39_RS07435	SM00363	S4 RNA-binding domain
AK39_RS07460	SM00363	S4 RNA-binding domain
AK39_RS07485	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AK39_RS07490	SM00851	MGS-like domain
AK39_RS07490	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AK39_RS07490	SM01209	AK39_RS07490
AK39_RS07505	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AK39_RS07550	SM00831	Cation transporter/ATPase, N-terminus
AK39_RS07565	SM00072	Guanylate kinase homologues.
AK39_RS07570	SM01409	AK39_RS07570
AK39_RS07580	SM00487	DEAD-like helicases superfamily
AK39_RS07580	SM00490	helicase superfamily c-terminal domain
AK39_RS07605	SM00331	Sigma factor PP2C-like phosphatases
AK39_RS07605	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AK39_RS07610	SM00220	Serine/Threonine protein kinases, catalytic domain
AK39_RS07610	SM00740	AK39_RS07610
AK39_RS07625	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
AK39_RS07645	SM01120	AK39_RS07645
AK39_RS07645	SM01121	AK39_RS07645
AK39_RS07650	SM00487	DEAD-like helicases superfamily
AK39_RS07650	SM00490	helicase superfamily c-terminal domain
AK39_RS07665	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AK39_RS07670	SM00822	AK39_RS07670
AK39_RS07680	SM00358	Double-stranded RNA binding motif
AK39_RS07680	SM00535	Ribonuclease III family
AK39_RS07685	SM00968	SMC proteins Flexible Hinge Domain
AK39_RS07690	SM00382	ATPases associated with a variety of cellular activities
AK39_RS07690	SM00962	SRP54-type protein, GTPase domain
AK39_RS07690	SM00963	SRP54-type protein, helical bundle domain
AK39_RS07700	SM00382	ATPases associated with a variety of cellular activities
AK39_RS07700	SM00962	SRP54-type protein, GTPase domain
AK39_RS07700	SM00963	SRP54-type protein, helical bundle domain
AK39_RS07750	SM00881	CoA binding domain
AK39_RS07760	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AK39_RS07760	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AK39_RS07760	SM00493	AK39_RS07760
AK39_RS07780	SM00382	ATPases associated with a variety of cellular activities
AK39_RS07780	SM01086	C-terminal, D2-small domain, of ClpB protein
AK39_RS07825	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AK39_RS07835	SM00479	AK39_RS07835
AK39_RS07835	SM00481	DNA polymerase alpha chain like domain
AK39_RS07845	SM00316	Ribosomal protein S1-like RNA-binding domain
AK39_RS07845	SM00322	K homology RNA-binding domain
AK39_RS07880	SM00904	Riboflavin kinase
AK39_RS07885	SM01387	AK39_RS07885
AK39_RS07890	SM00316	Ribosomal protein S1-like RNA-binding domain
AK39_RS07890	SM00322	K homology RNA-binding domain
AK39_RS07920	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AK39_RS07930	SM01130	AK39_RS07930
AK39_RS07940	SM00849	Metallo-beta-lactamase superfamily
AK39_RS07955	SM00382	ATPases associated with a variety of cellular activities
AK39_RS07955	SM00843	AK39_RS07955
AK39_RS07960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS07960	SM00866	AK39_RS07960
AK39_RS07970	SM00382	ATPases associated with a variety of cellular activities
AK39_RS08025	SM00852	Probable molybdopterin binding domain
AK39_RS08030	SM00382	ATPases associated with a variety of cellular activities
AK39_RS08040	SM00322	K homology RNA-binding domain
AK39_RS08040	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AK39_RS08070	SM00729	Elongator protein 3, MiaB family, Radical SAM
AK39_RS08085	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AK39_RS08085	SM00534	ATPase domain of DNA mismatch repair MUTS family
AK39_RS08090	SM00853	MutL C terminal dimerisation domain
AK39_RS08090	SM01340	AK39_RS08090
AK39_RS08095	SM00382	ATPases associated with a variety of cellular activities
AK39_RS08110	SM00448	cheY-homologous receiver domain
AK39_RS08110	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS08115	SM00387	Histidine kinase-like ATPases
AK39_RS08115	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS08145	SM00257	Lysin motif
AK39_RS08155	SM00148	Phospholipase C, catalytic domain (part); domain X
AK39_RS08175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS08205	SM00052	Putative diguanylate phosphodiesterase
AK39_RS08205	SM00091	PAS domain
AK39_RS08205	SM00267	diguanylate cyclase
AK39_RS08240	SM00478	endonuclease III
AK39_RS08250	SM00342	helix_turn_helix, arabinose operon control protein
AK39_RS08280	SM00382	ATPases associated with a variety of cellular activities
AK39_RS08310	SM00411	bacterial (prokaryotic) histone like domain
AK39_RS08325	SM00636	AK39_RS08325
AK39_RS08355	SM00420	helix_turn_helix, Deoxyribose operon repressor
AK39_RS08355	SM01134	AK39_RS08355
AK39_RS08370	SM00287	Bacterial SH3 domain homologues
AK39_RS08400	SM00382	ATPases associated with a variety of cellular activities
AK39_RS08420	SM00422	helix_turn_helix, mercury resistance
AK39_RS08425	SM01230	AK39_RS08425
AK39_RS08450	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS08455	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS08505	SM00382	ATPases associated with a variety of cellular activities
AK39_RS08585	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS08740	SM00287	Bacterial SH3 domain homologues
AK39_RS08740	SM00644	AK39_RS08740
AK39_RS08770	SM00028	Tetratricopeptide repeats
AK39_RS08795	SM00857	Resolvase, N terminal domain
AK39_RS08815	SM00062	Bacterial periplasmic substrate-binding proteins
AK39_RS08820	SM00382	ATPases associated with a variety of cellular activities
AK39_RS08845	SM00861	Transketolase, pyrimidine binding domain
AK39_RS08860	SM00382	ATPases associated with a variety of cellular activities
AK39_RS08865	SM00382	ATPases associated with a variety of cellular activities
AK39_RS08880	SM00644	AK39_RS08880
AK39_RS09015	SM01058	CarD-like/TRCF domain
AK39_RS09045	SM00091	PAS domain
AK39_RS09045	SM00387	Histidine kinase-like ATPases
AK39_RS09045	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS09060	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AK39_RS09065	SM00644	AK39_RS09065
AK39_RS09065	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
AK39_RS09130	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AK39_RS09175	SM00382	ATPases associated with a variety of cellular activities
AK39_RS09190	SM00479	AK39_RS09190
AK39_RS09210	SM00257	Lysin motif
AK39_RS09210	SM00636	AK39_RS09210
AK39_RS09225	SM01207	AK39_RS09225
AK39_RS09240	SM00448	cheY-homologous receiver domain
AK39_RS09240	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS09245	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AK39_RS09250	SM00881	CoA binding domain
AK39_RS09260	SM00387	Histidine kinase-like ATPases
AK39_RS09260	SM00433	TopoisomeraseII
AK39_RS09265	SM00434	DNA Topoisomerase IV
AK39_RS09280	SM00382	ATPases associated with a variety of cellular activities
AK39_RS09390	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AK39_RS09390	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AK39_RS09410	SM00729	Elongator protein 3, MiaB family, Radical SAM
AK39_RS09425	SM00852	Probable molybdopterin binding domain
AK39_RS09535	SM01022	AK39_RS09535
AK39_RS09560	SM00357	Cold shock protein domain
AK39_RS09565	SM00479	AK39_RS09565
AK39_RS09610	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AK39_RS09690	SM00829	Enoylreductase
AK39_RS09695	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS09765	SM00642	Alpha-amylase domain
AK39_RS09775	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AK39_RS09775	SM00534	ATPase domain of DNA mismatch repair MUTS family
AK39_RS09785	SM00855	Phosphoglycerate mutase family
AK39_RS09790	SM00829	Enoylreductase
AK39_RS09920	SM00829	Enoylreductase
AK39_RS09925	SM00849	Metallo-beta-lactamase superfamily
AK39_RS09990	SM00641	Glycosyl hydrolases family 25
AK39_RS09995	SM00849	Metallo-beta-lactamase superfamily
AK39_RS10020	SM00382	ATPases associated with a variety of cellular activities
AK39_RS10040	SM00871	Bacterial transcription activator, effector binding domain
AK39_RS10080	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS10085	SM00248	ankyrin repeats
AK39_RS10150	SM00849	Metallo-beta-lactamase superfamily
AK39_RS10185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS10185	SM00866	AK39_RS10185
AK39_RS10220	SM00914	AK39_RS10220
AK39_RS10265	SM01276	AK39_RS10265
AK39_RS10285	SM00829	Enoylreductase
AK39_RS10300	SM00829	Enoylreductase
AK39_RS10315	SM00861	Transketolase, pyrimidine binding domain
AK39_RS10360	SM00422	helix_turn_helix, mercury resistance
AK39_RS10365	SM01091	Transporter associated domain
AK39_RS10390	SM00028	Tetratricopeptide repeats
AK39_RS10440	SM00382	ATPases associated with a variety of cellular activities
AK39_RS10455	SM01266	AK39_RS10455
AK39_RS10515	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS10530	SM00382	ATPases associated with a variety of cellular activities
AK39_RS10590	SM01207	AK39_RS10590
AK39_RS10595	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS10640	SM00382	ATPases associated with a variety of cellular activities
AK39_RS10710	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS10720	SM00382	ATPases associated with a variety of cellular activities
AK39_RS10745	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS10795	SM00287	Bacterial SH3 domain homologues
AK39_RS10810	SM00342	helix_turn_helix, arabinose operon control protein
AK39_RS10875	SM00344	helix_turn_helix ASNC type
AK39_RS10920	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS10945	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AK39_RS10965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS10965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS10965	SM00319	Homologues of the ligand binding domain of Tar
AK39_RS11000	SM00028	Tetratricopeptide repeats
AK39_RS11005	SM00354	helix_turn _helix lactose operon repressor
AK39_RS11100	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS11110	SM00448	cheY-homologous receiver domain
AK39_RS11110	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS11115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS11115	SM00387	Histidine kinase-like ATPases
AK39_RS11115	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS11130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS11140	SM00382	ATPases associated with a variety of cellular activities
AK39_RS11190	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS11245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS11245	SM00387	Histidine kinase-like ATPases
AK39_RS11245	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS11250	SM00448	cheY-homologous receiver domain
AK39_RS11250	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS11290	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS11325	SM00342	helix_turn_helix, arabinose operon control protein
AK39_RS11360	SM00344	helix_turn_helix ASNC type
AK39_RS11380	SM00028	Tetratricopeptide repeats
AK39_RS11390	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS11405	SM00226	Low molecular weight phosphatase family
AK39_RS11430	SM00382	ATPases associated with a variety of cellular activities
AK39_RS11560	SM01060	AK39_RS11560
AK39_RS11605	SM00448	cheY-homologous receiver domain
AK39_RS11635	SM00919	Malic enzyme, NAD binding domain
AK39_RS11635	SM01274	AK39_RS11635
AK39_RS11670	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS11675	SM00870	AK39_RS11675
AK39_RS11755	SM00849	Metallo-beta-lactamase superfamily
AK39_RS11820	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS11840	SM00346	helix_turn_helix isocitrate lyase regulation
AK39_RS11845	SM00796	Allophanate hydrolase subunit 1
AK39_RS11985	SM00448	cheY-homologous receiver domain
AK39_RS11985	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS11990	SM00387	Histidine kinase-like ATPases
AK39_RS11990	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS12010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS12035	SM00342	helix_turn_helix, arabinose operon control protein
AK39_RS12035	SM00871	Bacterial transcription activator, effector binding domain
AK39_RS12060	SM00382	ATPases associated with a variety of cellular activities
AK39_RS12070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS12075	SM00382	ATPases associated with a variety of cellular activities
AK39_RS12100	SM00889	Elongation factor G, domain IV
AK39_RS12105	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS12155	SM01060	AK39_RS12155
AK39_RS12255	SM00850	LytTr DNA-binding domain
AK39_RS12280	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS12290	SM00098	Alkaline phosphatase homologues
AK39_RS12310	SM00346	helix_turn_helix isocitrate lyase regulation
AK39_RS12325	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AK39_RS12345	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS12375	SM01133	AK39_RS12375
AK39_RS12395	SM00382	ATPases associated with a variety of cellular activities
AK39_RS12445	SM00287	Bacterial SH3 domain homologues
AK39_RS12480	SM00830	Chorismate mutase type II
AK39_RS12535	SM00382	ATPases associated with a variety of cellular activities
AK39_RS12625	SM00028	Tetratricopeptide repeats
AK39_RS12655	SM00382	ATPases associated with a variety of cellular activities
AK39_RS12660	SM00062	Bacterial periplasmic substrate-binding proteins
AK39_RS12735	SM00382	ATPases associated with a variety of cellular activities
AK39_RS12925	SM00448	cheY-homologous receiver domain
AK39_RS12925	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS12930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS12930	SM00387	Histidine kinase-like ATPases
AK39_RS12930	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS12935	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
AK39_RS12975	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AK39_RS13045	SM00091	PAS domain
AK39_RS13045	SM00382	ATPases associated with a variety of cellular activities
AK39_RS13065	SM01130	AK39_RS13065
AK39_RS13095	SM01131	AK39_RS13095
AK39_RS13145	SM00341	Helicase and RNase D C-terminal
AK39_RS13145	SM00487	DEAD-like helicases superfamily
AK39_RS13145	SM00490	helicase superfamily c-terminal domain
AK39_RS13145	SM00956	AK39_RS13145
AK39_RS13215	SM00849	Metallo-beta-lactamase superfamily
AK39_RS13260	SM00060	Fibronectin type 3 domain
AK39_RS13260	SM00495	Chitin-binding domain type 3
AK39_RS13295	SM00116	Domain in cystathionine beta-synthase and other proteins.
AK39_RS13295	SM00382	ATPases associated with a variety of cellular activities
AK39_RS13355	SM00861	Transketolase, pyrimidine binding domain
AK39_RS13400	SM00420	helix_turn_helix, Deoxyribose operon repressor
AK39_RS13400	SM01134	AK39_RS13400
AK39_RS13420	SM00382	ATPases associated with a variety of cellular activities
AK39_RS13535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS13555	SM00871	Bacterial transcription activator, effector binding domain
AK39_RS13675	SM00465	GIY-YIG type nucleases (URI domain)
AK39_RS13785	SM00480	DNA polymerase III beta subunit
AK39_RS13880	SM00422	helix_turn_helix, mercury resistance
AK39_RS13950	SM00740	AK39_RS13950
AK39_RS13955	SM00829	Enoylreductase
AK39_RS13970	SM00387	Histidine kinase-like ATPases
AK39_RS13970	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS13980	SM00382	ATPases associated with a variety of cellular activities
AK39_RS14005	SM00091	PAS domain
AK39_RS14005	SM00387	Histidine kinase-like ATPases
AK39_RS14005	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS14130	SM01209	AK39_RS14130
AK39_RS14135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS14165	SM00382	ATPases associated with a variety of cellular activities
AK39_RS14195	SM00448	cheY-homologous receiver domain
AK39_RS14195	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS14255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS14300	SM00422	helix_turn_helix, mercury resistance
AK39_RS14300	SM00871	Bacterial transcription activator, effector binding domain
AK39_RS14320	SM00382	ATPases associated with a variety of cellular activities
AK39_RS14375	SM00448	cheY-homologous receiver domain
AK39_RS14375	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS14380	SM00387	Histidine kinase-like ATPases
AK39_RS14380	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS14440	SM00878	Biotin carboxylase C-terminal domain
AK39_RS14470	SM00382	ATPases associated with a variety of cellular activities
AK39_RS14485	SM00450	Rhodanese Homology Domain
AK39_RS14485	SM00849	Metallo-beta-lactamase superfamily
AK39_RS14495	SM00860	SMI1 / KNR4 family
AK39_RS14505	SM00052	Putative diguanylate phosphodiesterase
AK39_RS14505	SM00091	PAS domain
AK39_RS14505	SM00267	diguanylate cyclase
AK39_RS14515	SM00382	ATPases associated with a variety of cellular activities
AK39_RS14530	SM00646	AK39_RS14530
AK39_RS14555	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS14635	SM00354	helix_turn _helix lactose operon repressor
AK39_RS14640	SM00014	Acid phosphatase homologues
AK39_RS14715	SM00855	Phosphoglycerate mutase family
AK39_RS14720	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS14745	SM00382	ATPases associated with a variety of cellular activities
AK39_RS14775	SM00487	DEAD-like helicases superfamily
AK39_RS14775	SM00490	helicase superfamily c-terminal domain
AK39_RS14790	SM00849	Metallo-beta-lactamase superfamily
AK39_RS14815	SM01207	AK39_RS14815
AK39_RS14885	SM00835	Cupin
AK39_RS14900	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS14910	SM00646	AK39_RS14910
AK39_RS14920	SM00382	ATPases associated with a variety of cellular activities
AK39_RS14925	SM00382	ATPases associated with a variety of cellular activities
AK39_RS14960	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AK39_RS15030	SM00357	Cold shock protein domain
AK39_RS15070	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS15095	SM01059	Chloramphenicol acetyltransferase
AK39_RS15115	SM00849	Metallo-beta-lactamase superfamily
AK39_RS15145	SM00849	Metallo-beta-lactamase superfamily
AK39_RS15200	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AK39_RS15205	SM00363	S4 RNA-binding domain
AK39_RS15250	SM00411	bacterial (prokaryotic) histone like domain
AK39_RS15270	SM00923	MbtH-like protein
AK39_RS15275	SM00823	Phosphopantetheine attachment site
AK39_RS15275	SM00824	Thioesterase
AK39_RS15315	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS15460	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
AK39_RS15525	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS15550	SM00860	SMI1 / KNR4 family
AK39_RS15570	SM00014	Acid phosphatase homologues
AK39_RS15580	SM00219	Tyrosine kinase, catalytic domain
AK39_RS15620	SM00382	ATPases associated with a variety of cellular activities
AK39_RS15635	SM00882	Coenzyme A transferase
AK39_RS15640	SM00882	Coenzyme A transferase
AK39_RS15670	SM01091	Transporter associated domain
AK39_RS15710	SM00382	ATPases associated with a variety of cellular activities
AK39_RS15775	SM00829	Enoylreductase
AK39_RS15790	SM00421	helix_turn_helix, Lux Regulon
AK39_RS15790	SM00448	cheY-homologous receiver domain
AK39_RS15795	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AK39_RS15905	SM00563	Phosphate acyltransferases
AK39_RS15965	SM00382	ATPases associated with a variety of cellular activities
AK39_RS16040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS16040	SM00387	Histidine kinase-like ATPases
AK39_RS16040	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS16045	SM00448	cheY-homologous receiver domain
AK39_RS16045	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS16105	SM00857	Resolvase, N terminal domain
AK39_RS16150	SM00382	ATPases associated with a variety of cellular activities
AK39_RS16165	SM00327	von Willebrand factor (vWF) type A domain
AK39_RS16215	SM00836	DALR anticodon binding domain
AK39_RS16215	SM01016	Arginyl tRNA synthetase N terminal dom
AK39_RS16235	SM00567	E-Z type HEAT repeats
AK39_RS16235	SM00932	Scaffold protein Nfu/NifU N terminal
AK39_RS16270	SM00382	ATPases associated with a variety of cellular activities
AK39_RS16275	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AK39_RS16330	SM00894	Excalibur calcium-binding domain
AK39_RS16395	SM00852	Probable molybdopterin binding domain
AK39_RS16405	SM00729	Elongator protein 3, MiaB family, Radical SAM
AK39_RS16410	SM00100	Cyclic nucleotide-monophosphate binding domain
AK39_RS16410	SM00419	helix_turn_helix, cAMP Regulatory protein
AK39_RS16420	SM00382	ATPases associated with a variety of cellular activities
AK39_RS16425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS16445	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AK39_RS16470	SM00460	Transglutaminase/protease-like homologues
AK39_RS16485	SM00849	Metallo-beta-lactamase superfamily
AK39_RS16505	SM00829	Enoylreductase
AK39_RS16525	SM00487	DEAD-like helicases superfamily
AK39_RS16525	SM00490	helicase superfamily c-terminal domain
AK39_RS16640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS16670	SM01005	Alanine racemase, C-terminal domain
AK39_RS16685	SM00855	Phosphoglycerate mutase family
AK39_RS16690	SM00244	prohibitin homologues
AK39_RS16765	SM01091	Transporter associated domain
AK39_RS16790	SM00155	Phospholipase D. Active site motifs.
AK39_RS16840	SM00855	Phosphoglycerate mutase family
AK39_RS16955	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AK39_RS17020	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS17020	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS17055	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS17065	SM00966	SpoVT / AbrB like domain 
AK39_RS17090	SM00460	Transglutaminase/protease-like homologues
AK39_RS17180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS17180	SM00387	Histidine kinase-like ATPases
AK39_RS17180	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS17185	SM00448	cheY-homologous receiver domain
AK39_RS17185	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS17265	SM00387	Histidine kinase-like ATPases
AK39_RS17265	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS17270	SM00448	cheY-homologous receiver domain
AK39_RS17270	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS17275	SM00382	ATPases associated with a variety of cellular activities
AK39_RS17290	SM00287	Bacterial SH3 domain homologues
AK39_RS17325	SM00382	ATPases associated with a variety of cellular activities
AK39_RS17330	SM00382	ATPases associated with a variety of cellular activities
AK39_RS17350	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS17385	SM00382	ATPases associated with a variety of cellular activities
AK39_RS17390	SM00382	ATPases associated with a variety of cellular activities
AK39_RS17425	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AK39_RS17520	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AK39_RS17520	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AK39_RS17520	SM00493	AK39_RS17520
AK39_RS17530	SM00287	Bacterial SH3 domain homologues
AK39_RS17540	SM01011	Aminopeptidase P, N-terminal domain
AK39_RS17575	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AK39_RS17585	SM01133	AK39_RS17585
AK39_RS17635	SM00450	Rhodanese Homology Domain
AK39_RS17655	SM00448	cheY-homologous receiver domain
AK39_RS17655	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS17665	SM00729	Elongator protein 3, MiaB family, Radical SAM
AK39_RS17720	SM00850	LytTr DNA-binding domain
AK39_RS17750	SM00854	Bacterial capsule synthesis protein PGA_cap
AK39_RS17925	SM00047	Lysozyme subfamily 2
AK39_RS17930	SM00646	AK39_RS17930
AK39_RS17995	SM00487	DEAD-like helicases superfamily
AK39_RS17995	SM00490	helicase superfamily c-terminal domain
AK39_RS18000	SM00448	cheY-homologous receiver domain
AK39_RS18005	SM00387	Histidine kinase-like ATPases
AK39_RS18010	SM00919	Malic enzyme, NAD binding domain
AK39_RS18010	SM01274	AK39_RS18010
AK39_RS18030	SM00155	Phospholipase D. Active site motifs.
AK39_RS18045	SM00382	ATPases associated with a variety of cellular activities
AK39_RS18055	SM00421	helix_turn_helix, Lux Regulon
AK39_RS18055	SM00448	cheY-homologous receiver domain
AK39_RS18100	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS18190	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AK39_RS18200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS18200	SM00895	AK39_RS18200
AK39_RS18260	SM00855	Phosphoglycerate mutase family
AK39_RS18275	SM00835	Cupin
AK39_RS18295	SM00849	Metallo-beta-lactamase superfamily
AK39_RS18295	SM01027	Beta-Casp domain
AK39_RS18310	SM00382	ATPases associated with a variety of cellular activities
AK39_RS18330	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS18385	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AK39_RS18470	SM00028	Tetratricopeptide repeats
AK39_RS18490	SM00028	Tetratricopeptide repeats
AK39_RS18515	SM00260	Two component signalling adaptor domain
AK39_RS18515	SM00448	cheY-homologous receiver domain
AK39_RS18555	SM00382	ATPases associated with a variety of cellular activities
AK39_RS18640	SM00138	Methyltransferase, chemotaxis proteins 
AK39_RS18665	SM00448	cheY-homologous receiver domain
AK39_RS18760	SM00849	Metallo-beta-lactamase superfamily
AK39_RS18810	SM00357	Cold shock protein domain
AK39_RS18920	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AK39_RS18920	SM00475	5'-3' exonuclease
AK39_RS18950	SM00450	Rhodanese Homology Domain
AK39_RS19010	SM00491	AK39_RS19010
AK39_RS19020	SM00981	AK39_RS19020
AK39_RS19070	SM00060	Fibronectin type 3 domain
AK39_RS19080	SM00478	endonuclease III
AK39_RS19080	SM00525	AK39_RS19080
AK39_RS19105	SM00479	AK39_RS19105
AK39_RS19105	SM00487	DEAD-like helicases superfamily
AK39_RS19105	SM00491	AK39_RS19105
AK39_RS19155	SM00851	MGS-like domain
AK39_RS19175	SM00986	Uracil DNA glycosylase superfamily
AK39_RS19175	SM00987	UreE urease accessory protein, C-terminal domain 
AK39_RS19220	SM00914	AK39_RS19220
AK39_RS19225	SM00028	Tetratricopeptide repeats
AK39_RS19245	SM00562	AK39_RS19245
AK39_RS19270	SM00411	bacterial (prokaryotic) histone like domain
AK39_RS19325	SM01240	AK39_RS19325
AK39_RS19330	SM00316	Ribosomal protein S1-like RNA-binding domain
AK39_RS19345	SM00870	AK39_RS19345
AK39_RS19355	SM00644	AK39_RS19355
AK39_RS19370	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AK39_RS19380	SM00422	helix_turn_helix, mercury resistance
AK39_RS19390	SM00257	Lysin motif
AK39_RS19400	SM00487	DEAD-like helicases superfamily
AK39_RS19400	SM00490	helicase superfamily c-terminal domain
AK39_RS19425	SM00257	Lysin motif
AK39_RS19435	SM00091	PAS domain
AK39_RS19435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS19435	SM00387	Histidine kinase-like ATPases
AK39_RS19435	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS19440	SM00448	cheY-homologous receiver domain
AK39_RS19440	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS19460	SM00363	S4 RNA-binding domain
AK39_RS19515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS19515	SM00387	Histidine kinase-like ATPases
AK39_RS19515	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS19535	SM00091	PAS domain
AK39_RS19535	SM00387	Histidine kinase-like ATPases
AK39_RS19535	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS19630	SM00421	helix_turn_helix, Lux Regulon
AK39_RS19630	SM00448	cheY-homologous receiver domain
AK39_RS19635	SM00387	Histidine kinase-like ATPases
AK39_RS19820	SM01329	AK39_RS19820
AK39_RS19825	SM00917	LeuA allosteric (dimerisation) domain
AK39_RS19900	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS20020	SM00344	helix_turn_helix ASNC type
AK39_RS20040	SM00382	ATPases associated with a variety of cellular activities
AK39_RS20050	SM00382	ATPases associated with a variety of cellular activities
AK39_RS20055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS20070	SM00465	GIY-YIG type nucleases (URI domain)
AK39_RS20070	SM00496	Intron-encoded nuclease repeat 2
AK39_RS20140	SM00387	Histidine kinase-like ATPases
AK39_RS20140	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS20160	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS20165	SM00387	Histidine kinase-like ATPases
AK39_RS20165	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS20200	SM00420	helix_turn_helix, Deoxyribose operon repressor
AK39_RS20200	SM01134	AK39_RS20200
AK39_RS20260	SM00822	AK39_RS20260
AK39_RS20330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS20330	SM00895	AK39_RS20330
AK39_RS20335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS20335	SM00387	Histidine kinase-like ATPases
AK39_RS20335	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS20340	SM00448	cheY-homologous receiver domain
AK39_RS20340	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS20390	SM00014	Acid phosphatase homologues
AK39_RS20410	SM00382	ATPases associated with a variety of cellular activities
AK39_RS20430	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS20525	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS20530	SM00861	Transketolase, pyrimidine binding domain
AK39_RS20645	SM00635	Bacterial Ig-like domain 2
AK39_RS20800	SM00954	Region found in RelA / SpoT proteins
AK39_RS20810	SM01118	AK39_RS20810
AK39_RS20840	SM00155	Phospholipase D. Active site motifs.
AK39_RS20880	SM00382	ATPases associated with a variety of cellular activities
AK39_RS20885	SM00382	ATPases associated with a variety of cellular activities
AK39_RS20925	SM00825	Beta-ketoacyl synthase
AK39_RS20955	SM00382	ATPases associated with a variety of cellular activities
AK39_RS20955	SM01086	C-terminal, D2-small domain, of ClpB protein
AK39_RS21005	SM00316	Ribosomal protein S1-like RNA-binding domain
AK39_RS21015	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS21020	SM00642	Alpha-amylase domain
AK39_RS21035	SM01060	AK39_RS21035
AK39_RS21150	SM00357	Cold shock protein domain
AK39_RS21190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS21190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS21220	SM00448	cheY-homologous receiver domain
AK39_RS21220	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS21225	SM00387	Histidine kinase-like ATPases
AK39_RS21225	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS21240	SM00342	helix_turn_helix, arabinose operon control protein
AK39_RS21240	SM00871	Bacterial transcription activator, effector binding domain
AK39_RS21255	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AK39_RS21325	SM00725	NEAr Transporter domain
AK39_RS21350	SM00849	Metallo-beta-lactamase superfamily
AK39_RS21360	SM00354	helix_turn _helix lactose operon repressor
AK39_RS21465	SM00422	helix_turn_helix, mercury resistance
AK39_RS21535	SM00382	ATPases associated with a variety of cellular activities
AK39_RS21550	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS21600	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS21650	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS21670	SM00028	Tetratricopeptide repeats
AK39_RS21695	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AK39_RS21735	SM00829	Enoylreductase
AK39_RS21775	SM00387	Histidine kinase-like ATPases
AK39_RS21775	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS21775	SM00448	cheY-homologous receiver domain
AK39_RS21780	SM00138	Methyltransferase, chemotaxis proteins 
AK39_RS21785	SM00331	Sigma factor PP2C-like phosphatases
AK39_RS21785	SM00448	cheY-homologous receiver domain
AK39_RS21850	SM00460	Transglutaminase/protease-like homologues
AK39_RS21870	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AK39_RS21940	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS22065	SM00422	helix_turn_helix, mercury resistance
AK39_RS22100	SM00448	cheY-homologous receiver domain
AK39_RS22105	SM00091	PAS domain
AK39_RS22105	SM00387	Histidine kinase-like ATPases
AK39_RS22120	SM00860	SMI1 / KNR4 family
AK39_RS22125	SM00860	SMI1 / KNR4 family
AK39_RS22140	SM00382	ATPases associated with a variety of cellular activities
AK39_RS22210	SM00646	AK39_RS22210
AK39_RS22270	SM00635	Bacterial Ig-like domain 2
AK39_RS22285	SM00957	SecA DEAD-like domain
AK39_RS22285	SM00958	SecA preprotein cross-linking domain
AK39_RS22320	SM00729	Elongator protein 3, MiaB family, Radical SAM
AK39_RS22400	SM00382	ATPases associated with a variety of cellular activities
AK39_RS22410	SM00062	Bacterial periplasmic substrate-binding proteins
AK39_RS22410	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AK39_RS22420	SM00382	ATPases associated with a variety of cellular activities
AK39_RS22455	SM01060	AK39_RS22455
AK39_RS22520	SM00344	helix_turn_helix ASNC type
AK39_RS22620	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
AK39_RS22675	SM00382	ATPases associated with a variety of cellular activities
AK39_RS22685	SM00287	Bacterial SH3 domain homologues
AK39_RS22735	SM00829	Enoylreductase
AK39_RS22760	SM00450	Rhodanese Homology Domain
AK39_RS22765	SM00450	Rhodanese Homology Domain
AK39_RS22775	SM00450	Rhodanese Homology Domain
AK39_RS22775	SM00849	Metallo-beta-lactamase superfamily
AK39_RS22780	SM00450	Rhodanese Homology Domain
AK39_RS22790	SM00450	Rhodanese Homology Domain
AK39_RS22805	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS22875	SM00354	helix_turn _helix lactose operon repressor
AK39_RS22885	SM00640	Glycosyl hydrolases family 32
AK39_RS22925	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS23020	SM00382	ATPases associated with a variety of cellular activities
AK39_RS23030	SM00287	Bacterial SH3 domain homologues
AK39_RS23050	SM00116	Domain in cystathionine beta-synthase and other proteins.
AK39_RS23195	SM00899	AK39_RS23195
AK39_RS23295	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS23340	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS23350	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS23385	SM00770	Zinc dependent phospholipase C (alpha toxin)
AK39_RS23395	SM00829	Enoylreductase
AK39_RS23430	SM00382	ATPases associated with a variety of cellular activities
AK39_RS23445	SM00354	helix_turn _helix lactose operon repressor
AK39_RS23460	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS23470	SM00382	ATPases associated with a variety of cellular activities
AK39_RS23475	SM00382	ATPases associated with a variety of cellular activities
AK39_RS23515	SM00448	cheY-homologous receiver domain
AK39_RS23515	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS23520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS23520	SM00387	Histidine kinase-like ATPases
AK39_RS23520	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS23570	SM00062	Bacterial periplasmic substrate-binding proteins
AK39_RS23570	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AK39_RS23575	SM00382	ATPases associated with a variety of cellular activities
AK39_RS23610	SM00642	Alpha-amylase domain
AK39_RS23620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS23620	SM00866	AK39_RS23620
AK39_RS23630	SM00052	Putative diguanylate phosphodiesterase
AK39_RS23630	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AK39_RS23630	SM00091	PAS domain
AK39_RS23630	SM00267	diguanylate cyclase
AK39_RS23645	SM00155	Phospholipase D. Active site motifs.
AK39_RS23650	SM00382	ATPases associated with a variety of cellular activities
AK39_RS23655	SM00327	von Willebrand factor (vWF) type A domain
AK39_RS23680	SM00382	ATPases associated with a variety of cellular activities
AK39_RS23710	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS23785	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AK39_RS23795	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AK39_RS23795	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AK39_RS23810	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AK39_RS23810	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AK39_RS23830	SM00448	cheY-homologous receiver domain
AK39_RS23830	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS23835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS23835	SM00387	Histidine kinase-like ATPases
AK39_RS23835	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS23845	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS23860	SM00919	Malic enzyme, NAD binding domain
AK39_RS23860	SM01274	AK39_RS23860
AK39_RS23870	SM00448	cheY-homologous receiver domain
AK39_RS23875	SM00387	Histidine kinase-like ATPases
AK39_RS23880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS23880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS23895	SM00387	Histidine kinase-like ATPases
AK39_RS23895	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS23900	SM00448	cheY-homologous receiver domain
AK39_RS23900	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS23925	SM00382	ATPases associated with a variety of cellular activities
AK39_RS23935	SM00248	ankyrin repeats
AK39_RS23960	SM00091	PAS domain
AK39_RS23960	SM00387	Histidine kinase-like ATPases
AK39_RS23965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS23965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS23970	SM00244	prohibitin homologues
AK39_RS23980	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AK39_RS23995	SM00364	Leucine-rich repeats, bacterial type
AK39_RS23995	SM00365	Leucine-rich repeat, SDS22-like subfamily
AK39_RS23995	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AK39_RS23995	SM00725	NEAr Transporter domain
AK39_RS24010	SM00763	PrkA AAA domain
AK39_RS24020	SM00052	Putative diguanylate phosphodiesterase
AK39_RS24020	SM00091	PAS domain
AK39_RS24020	SM00267	diguanylate cyclase
AK39_RS24035	SM00567	E-Z type HEAT repeats
AK39_RS24190	SM00382	ATPases associated with a variety of cellular activities
AK39_RS24210	SM00382	ATPases associated with a variety of cellular activities
AK39_RS24235	SM00478	endonuclease III
AK39_RS24235	SM00525	AK39_RS24235
AK39_RS24320	SM00984	UDP binding domain
AK39_RS24380	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS24400	SM00382	ATPases associated with a variety of cellular activities
AK39_RS24635	SM00382	ATPases associated with a variety of cellular activities
AK39_RS24665	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS24670	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS24685	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS24700	SM00478	endonuclease III
AK39_RS24795	SM00226	Low molecular weight phosphatase family
AK39_RS24805	SM00831	Cation transporter/ATPase, N-terminus
AK39_RS24850	SM00946	Prolyl-tRNA synthetase, C-terminal
AK39_RS24875	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS24905	SM00060	Fibronectin type 3 domain
AK39_RS24905	SM00636	AK39_RS24905
AK39_RS24905	SM00637	AK39_RS24905
AK39_RS24910	SM00382	ATPases associated with a variety of cellular activities
AK39_RS24915	SM00382	ATPases associated with a variety of cellular activities
AK39_RS24935	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS24935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS24955	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AK39_RS24955	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AK39_RS24955	SM00493	AK39_RS24955
AK39_RS24975	SM00642	Alpha-amylase domain
AK39_RS24980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS24980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS24985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS24985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS24990	SM00382	ATPases associated with a variety of cellular activities
AK39_RS24995	SM00062	Bacterial periplasmic substrate-binding proteins
AK39_RS24995	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AK39_RS25110	SM01007	Class II Aldolase and Adducin N-terminal domain
AK39_RS25155	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AK39_RS25220	SM00382	ATPases associated with a variety of cellular activities
AK39_RS25235	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AK39_RS25240	SM00845	GatB domain
AK39_RS25260	SM00347	helix_turn_helix multiple antibiotic resistance protein
AK39_RS25290	SM00382	ATPases associated with a variety of cellular activities
AK39_RS25290	SM00930	AK39_RS25290
AK39_RS25320	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AK39_RS25320	SM00292	breast cancer carboxy-terminal domain
AK39_RS25320	SM00532	Ligase N family
AK39_RS25340	SM00244	prohibitin homologues
AK39_RS25350	SM01209	AK39_RS25350
AK39_RS25350	SM01210	AK39_RS25350
AK39_RS25355	SM00798	AICARFT/IMPCHase bienzyme
AK39_RS25355	SM00851	MGS-like domain
AK39_RS25380	SM01211	AK39_RS25380
AK39_RS25395	SM00998	Adenylosuccinate lyase C-terminus
AK39_RS25405	SM01001	AIR carboxylase
AK39_RS25430	SM00448	cheY-homologous receiver domain
AK39_RS25430	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS25435	SM00387	Histidine kinase-like ATPases
AK39_RS25435	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS25440	SM00382	ATPases associated with a variety of cellular activities
AK39_RS25520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS25520	SM00387	Histidine kinase-like ATPases
AK39_RS25520	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS25525	SM00448	cheY-homologous receiver domain
AK39_RS25525	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS25545	SM00883	Chaperonin 10 Kd subunit
AK39_RS25560	SM00881	CoA binding domain
AK39_RS25565	SM00382	ATPases associated with a variety of cellular activities
AK39_RS25670	SM00731	SprT homologues.
AK39_RS25680	SM00316	Ribosomal protein S1-like RNA-binding domain
AK39_RS25680	SM00732	Likely ribonuclease with RNase H fold.
AK39_RS25695	SM01005	Alanine racemase, C-terminal domain
AK39_RS25720	SM00487	DEAD-like helicases superfamily
AK39_RS25720	SM00490	helicase superfamily c-terminal domain
AK39_RS25780	SM00382	ATPases associated with a variety of cellular activities
AK39_RS25785	SM00382	ATPases associated with a variety of cellular activities
AK39_RS25815	SM00382	ATPases associated with a variety of cellular activities
AK39_RS25870	SM00354	helix_turn _helix lactose operon repressor
AK39_RS25880	SM00563	Phosphate acyltransferases
AK39_RS25975	SM00342	helix_turn_helix, arabinose operon control protein
AK39_RS25990	SM00382	ATPases associated with a variety of cellular activities
AK39_RS25995	SM00382	ATPases associated with a variety of cellular activities
AK39_RS26045	SM00829	Enoylreductase
AK39_RS26055	SM00382	ATPases associated with a variety of cellular activities
AK39_RS26055	SM00930	AK39_RS26055
AK39_RS26105	SM01350	AK39_RS26105
AK39_RS26120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AK39_RS26120	SM00895	AK39_RS26120
AK39_RS26240	SM01251	AK39_RS26240
AK39_RS26255	SM00646	AK39_RS26255
AK39_RS26285	SM00382	ATPases associated with a variety of cellular activities
AK39_RS26290	SM00382	ATPases associated with a variety of cellular activities
AK39_RS26300	SM00662	RNA polymerases D
AK39_RS26320	SM00316	Ribosomal protein S1-like RNA-binding domain
AK39_RS26380	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AK39_RS26385	SM01374	AK39_RS26385
AK39_RS26405	SM00322	K homology RNA-binding domain
AK39_RS26420	SM01382	AK39_RS26420
AK39_RS26420	SM01383	AK39_RS26420
AK39_RS26440	SM01403	AK39_RS26440
AK39_RS26450	SM00838	Elongation factor G C-terminus
AK39_RS26450	SM00889	Elongation factor G, domain IV
AK39_RS26470	SM00663	RNA polymerase I subunit A N-terminus
AK39_RS26500	SM00649	Ribosomal protein L11/L12
AK39_RS26505	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AK39_RS26520	SM00421	helix_turn_helix, Lux Regulon
AK39_RS26530	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AK39_RS26535	SM00535	Ribonuclease III family
AK39_RS26540	SM00840	AK39_RS26540
AK39_RS26565	SM00670	Large family of predicted nucleotide-binding domains
AK39_RS26575	SM00382	ATPases associated with a variety of cellular activities
AK39_RS26580	SM00382	ATPases associated with a variety of cellular activities
AK39_RS26580	SM01086	C-terminal, D2-small domain, of ClpB protein
AK39_RS26625	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS26635	SM00905	Dihydroneopterin aldolase
AK39_RS26675	SM00382	ATPases associated with a variety of cellular activities
AK39_RS26685	SM00977	TilS substrate C-terminal domain
AK39_RS26690	SM00331	Sigma factor PP2C-like phosphatases
AK39_RS26690	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AK39_RS26705	SM00316	Ribosomal protein S1-like RNA-binding domain
AK39_RS26725	SM00363	S4 RNA-binding domain
AK39_RS26740	SM00966	SpoVT / AbrB like domain 
AK39_RS26745	SM00487	DEAD-like helicases superfamily
AK39_RS26745	SM00490	helicase superfamily c-terminal domain
AK39_RS26745	SM00982	AK39_RS26745
AK39_RS26745	SM01058	CarD-like/TRCF domain
AK39_RS26760	SM01400	AK39_RS26760
AK39_RS26805	SM00650	Ribosomal RNA adenine dimethylases
AK39_RS26810	SM00493	AK39_RS26810
AK39_RS26825	SM00966	SpoVT / AbrB like domain 
AK39_RS26910	SM00493	AK39_RS26910
AK39_RS26920	SM00382	ATPases associated with a variety of cellular activities
AK39_RS26975	SM00936	Penicillin-binding protein 5, C-terminal domain 
AK39_RS26980	SM00116	Domain in cystathionine beta-synthase and other proteins.
AK39_RS26980	SM01240	AK39_RS26980
AK39_RS27015	SM00434	DNA Topoisomerase IV
AK39_RS27020	SM00387	Histidine kinase-like ATPases
AK39_RS27020	SM00433	TopoisomeraseII
AK39_RS27035	SM00480	DNA polymerase III beta subunit
AK39_RS27040	SM00382	ATPases associated with a variety of cellular activities
AK39_RS27040	SM00760	Bacterial dnaA protein helix-turn-helix domain
AK39_RS27060	SM00393	Putative single-stranded nucleic acids-binding domain
AK39_RS27060	SM01245	AK39_RS27060
AK39_RS27070	SM01228	AK39_RS27070
AK39_RS27080	SM00470	ParB-like nuclease domain
AK39_RS27090	SM00470	ParB-like nuclease domain
AK39_RS27135	SM00267	diguanylate cyclase
AK39_RS27150	SM00788	Adenylosuccinate synthetase
AK39_RS27175	SM00448	cheY-homologous receiver domain
AK39_RS27175	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS27180	SM00091	PAS domain
AK39_RS27180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS27180	SM00387	Histidine kinase-like ATPases
AK39_RS27180	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS27195	SM00849	Metallo-beta-lactamase superfamily
AK39_RS27200	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AK39_RS27225	SM01240	AK39_RS27225
AK39_RS27235	SM00487	DEAD-like helicases superfamily
AK39_RS27235	SM00490	helicase superfamily c-terminal domain
AK39_RS27290	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AK39_RS27290	SM00387	Histidine kinase-like ATPases
AK39_RS27295	SM00448	cheY-homologous receiver domain
AK39_RS27295	SM00850	LytTr DNA-binding domain
AK39_RS27355	SM00382	ATPases associated with a variety of cellular activities
AK39_RS27380	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AK39_RS27410	SM00448	cheY-homologous receiver domain
AK39_RS27410	SM00850	LytTr DNA-binding domain
AK39_RS27425	SM00267	diguanylate cyclase
AK39_RS27440	SM00421	helix_turn_helix, Lux Regulon
AK39_RS27440	SM00448	cheY-homologous receiver domain
AK39_RS27450	SM00100	Cyclic nucleotide-monophosphate binding domain
AK39_RS27485	SM00354	helix_turn _helix lactose operon repressor
AK39_RS27495	SM00382	ATPases associated with a variety of cellular activities
AK39_RS27505	SM00986	Uracil DNA glycosylase superfamily
AK39_RS27505	SM00987	UreE urease accessory protein, C-terminal domain 
AK39_RS27550	SM00936	Penicillin-binding protein 5, C-terminal domain 
AK39_RS27600	SM00382	ATPases associated with a variety of cellular activities
AK39_RS27610	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AK39_RS27640	SM00422	helix_turn_helix, mercury resistance
AK39_RS27685	SM00836	DALR anticodon binding domain
AK39_RS27685	SM01016	Arginyl tRNA synthetase N terminal dom
AK39_RS27735	SM00382	ATPases associated with a variety of cellular activities
AK39_RS27745	SM00387	Histidine kinase-like ATPases
AK39_RS27750	SM00421	helix_turn_helix, Lux Regulon
AK39_RS27750	SM00448	cheY-homologous receiver domain
AK39_RS27755	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS27765	SM00052	Putative diguanylate phosphodiesterase
AK39_RS27765	SM00267	diguanylate cyclase
AK39_RS27775	SM00155	Phospholipase D. Active site motifs.
AK39_RS27825	SM00448	cheY-homologous receiver domain
AK39_RS27845	SM00357	Cold shock protein domain
AK39_RS27845	SM00382	ATPases associated with a variety of cellular activities
AK39_RS27845	SM00959	Rho termination factor, N-terminal domain
AK39_RS27860	SM00937	AK39_RS27860
AK39_RS27895	SM00903	Flavin reductase like domain
AK39_RS27910	SM00226	Low molecular weight phosphatase family
AK39_RS27980	SM00382	ATPases associated with a variety of cellular activities
AK39_RS28000	SM00052	Putative diguanylate phosphodiesterase
AK39_RS28000	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AK39_RS28000	SM00091	PAS domain
AK39_RS28000	SM00267	diguanylate cyclase
AK39_RS28085	SM00850	LytTr DNA-binding domain
AK39_RS28090	SM00382	ATPases associated with a variety of cellular activities
AK39_RS28160	SM00984	UDP binding domain
AK39_RS28170	SM00287	Bacterial SH3 domain homologues
AK39_RS28170	SM00382	ATPases associated with a variety of cellular activities
AK39_RS28200	SM00448	cheY-homologous receiver domain
AK39_RS28200	SM00862	Transcriptional regulatory protein, C terminal
AK39_RS28205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AK39_RS28205	SM00387	Histidine kinase-like ATPases
AK39_RS28205	SM00388	His Kinase A (phosphoacceptor) domain
AK39_RS28230	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS28240	SM00382	ATPases associated with a variety of cellular activities
AK39_RS28285	SM00487	DEAD-like helicases superfamily
AK39_RS28285	SM00490	helicase superfamily c-terminal domain
AK39_RS28315	SM00287	Bacterial SH3 domain homologues
AK39_RS28495	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
AK39_RS28500	SM00382	ATPases associated with a variety of cellular activities
AK39_RS28515	SM00984	UDP binding domain
AK39_RS28555	SM00487	DEAD-like helicases superfamily
AK39_RS28555	SM00490	helicase superfamily c-terminal domain
AK39_RS28565	SM00357	Cold shock protein domain
AK39_RS28575	SM00957	SecA DEAD-like domain
AK39_RS28575	SM00958	SecA preprotein cross-linking domain
AK39_RS28580	SM00937	AK39_RS28580
AK39_RS28595	SM00382	ATPases associated with a variety of cellular activities
AK39_RS28605	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AK39_RS28605	SM00245	tail specific protease
AK39_RS28615	SM00382	ATPases associated with a variety of cellular activities
AK39_RS28625	SM00382	ATPases associated with a variety of cellular activities
AK39_RS28635	SM00422	helix_turn_helix, mercury resistance
AK39_RS28650	SM00530	Helix-turn-helix XRE-family like proteins 
AK39_RS28670	SM00422	helix_turn_helix, mercury resistance
AK39_RS28690	SM00487	DEAD-like helicases superfamily
AK39_RS28690	SM00490	helicase superfamily c-terminal domain
AK39_RS28730	SM00028	Tetratricopeptide repeats
