CR091_RS00005	SM00382	ATPases associated with a variety of cellular activities
CR091_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CR091_RS00010	SM00480	DNA polymerase III beta subunit
CR091_RS00025	SM00387	Histidine kinase-like ATPases
CR091_RS00025	SM00433	TopoisomeraseII
CR091_RS00030	SM00434	DNA Topoisomerase IV
CR091_RS00065	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS00065	SM01240	CR091_RS00065
CR091_RS00070	SM00936	Penicillin-binding protein 5, C-terminal domain 
CR091_RS00105	SM00257	Lysin motif
CR091_RS00105	SM00636	CR091_RS00105
CR091_RS00125	SM00382	ATPases associated with a variety of cellular activities
CR091_RS00135	SM00493	CR091_RS00135
CR091_RS00285	SM00966	SpoVT / AbrB like domain 
CR091_RS00300	SM00493	CR091_RS00300
CR091_RS00305	SM00650	Ribosomal RNA adenine dimethylases
CR091_RS00350	SM01400	CR091_RS00350
CR091_RS00370	SM00487	DEAD-like helicases superfamily
CR091_RS00370	SM00490	helicase superfamily c-terminal domain
CR091_RS00370	SM00982	CR091_RS00370
CR091_RS00370	SM01058	CarD-like/TRCF domain
CR091_RS00375	SM00966	SpoVT / AbrB like domain 
CR091_RS00390	SM00363	S4 RNA-binding domain
CR091_RS00410	SM00316	Ribosomal protein S1-like RNA-binding domain
CR091_RS00425	SM00331	Sigma factor PP2C-like phosphatases
CR091_RS00425	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CR091_RS00435	SM00220	Serine/Threonine protein kinases, catalytic domain
CR091_RS00440	SM00977	TilS substrate C-terminal domain
CR091_RS00450	SM00382	ATPases associated with a variety of cellular activities
CR091_RS00485	SM00905	Dihydroneopterin aldolase
CR091_RS00530	SM00382	ATPases associated with a variety of cellular activities
CR091_RS00530	SM01086	C-terminal, D2-small domain, of ClpB protein
CR091_RS00535	SM00382	ATPases associated with a variety of cellular activities
CR091_RS00545	SM00670	Large family of predicted nucleotide-binding domains
CR091_RS00570	SM00840	CR091_RS00570
CR091_RS00575	SM00535	Ribonuclease III family
CR091_RS00580	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CR091_RS00590	SM00421	helix_turn_helix, Lux Regulon
CR091_RS00605	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CR091_RS00605	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CR091_RS00610	SM00649	Ribosomal protein L11/L12
CR091_RS00640	SM00663	RNA polymerase I subunit A N-terminus
CR091_RS00660	SM00838	Elongation factor G C-terminus
CR091_RS00660	SM00889	Elongation factor G, domain IV
CR091_RS00670	SM01403	CR091_RS00670
CR091_RS00690	SM01382	CR091_RS00690
CR091_RS00690	SM01383	CR091_RS00690
CR091_RS00705	SM00322	K homology RNA-binding domain
CR091_RS00725	SM01374	CR091_RS00725
CR091_RS00730	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CR091_RS00790	SM00316	Ribosomal protein S1-like RNA-binding domain
CR091_RS00810	SM00662	RNA polymerases D
CR091_RS00820	SM00382	ATPases associated with a variety of cellular activities
CR091_RS00825	SM00382	ATPases associated with a variety of cellular activities
CR091_RS00855	SM00646	CR091_RS00855
CR091_RS00875	SM01251	CR091_RS00875
CR091_RS01000	SM00287	Bacterial SH3 domain homologues
CR091_RS01040	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS01045	SM00382	ATPases associated with a variety of cellular activities
CR091_RS01070	SM00448	cheY-homologous receiver domain
CR091_RS01070	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS01075	SM00387	Histidine kinase-like ATPases
CR091_RS01075	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS01090	SM00900	CR091_RS01090
CR091_RS01105	SM00487	DEAD-like helicases superfamily
CR091_RS01105	SM00490	helicase superfamily c-terminal domain
CR091_RS01130	SM01005	Alanine racemase, C-terminal domain
CR091_RS01155	SM00387	Histidine kinase-like ATPases
CR091_RS01160	SM00331	Sigma factor PP2C-like phosphatases
CR091_RS01180	SM00331	Sigma factor PP2C-like phosphatases
CR091_RS01185	SM00316	Ribosomal protein S1-like RNA-binding domain
CR091_RS01185	SM00732	Likely ribonuclease with RNase H fold.
CR091_RS01195	SM00731	SprT homologues.
CR091_RS01300	SM00382	ATPases associated with a variety of cellular activities
CR091_RS01305	SM00881	CoA binding domain
CR091_RS01330	SM00883	Chaperonin 10 Kd subunit
CR091_RS01350	SM00460	Transglutaminase/protease-like homologues
CR091_RS01415	SM01001	AIR carboxylase
CR091_RS01425	SM00998	Adenylosuccinate lyase C-terminus
CR091_RS01440	SM01211	CR091_RS01440
CR091_RS01465	SM00798	AICARFT/IMPCHase bienzyme
CR091_RS01465	SM00851	MGS-like domain
CR091_RS01470	SM01209	CR091_RS01470
CR091_RS01470	SM01210	CR091_RS01470
CR091_RS01505	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CR091_RS01505	SM00292	breast cancer carboxy-terminal domain
CR091_RS01505	SM00532	Ligase N family
CR091_RS01530	SM00845	GatB domain
CR091_RS01535	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CR091_RS01575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS01575	SM00387	Histidine kinase-like ATPases
CR091_RS01575	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS01595	SM00422	helix_turn_helix, mercury resistance
CR091_RS01615	SM00382	ATPases associated with a variety of cellular activities
CR091_RS01620	SM00062	Bacterial periplasmic substrate-binding proteins
CR091_RS01620	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CR091_RS01655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS01655	SM00387	Histidine kinase-like ATPases
CR091_RS01655	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS01660	SM00448	cheY-homologous receiver domain
CR091_RS01660	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS01665	SM00387	Histidine kinase-like ATPases
CR091_RS01665	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS01670	SM00448	cheY-homologous receiver domain
CR091_RS01670	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS01685	SM00382	ATPases associated with a variety of cellular activities
CR091_RS01690	SM00014	Acid phosphatase homologues
CR091_RS01760	SM00091	PAS domain
CR091_RS01760	SM00387	Histidine kinase-like ATPases
CR091_RS01765	SM00448	cheY-homologous receiver domain
CR091_RS01780	SM00091	PAS domain
CR091_RS01780	SM00387	Histidine kinase-like ATPases
CR091_RS01780	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS01785	SM00487	DEAD-like helicases superfamily
CR091_RS01785	SM00490	helicase superfamily c-terminal domain
CR091_RS01845	SM01065	Starch binding domain
CR091_RS01865	SM00382	ATPases associated with a variety of cellular activities
CR091_RS01920	SM00226	Low molecular weight phosphatase family
CR091_RS01945	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS02025	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CR091_RS02025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS02025	SM00387	Histidine kinase-like ATPases
CR091_RS02025	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS02055	SM00822	CR091_RS02055
CR091_RS02080	SM00478	endonuclease III
CR091_RS02080	SM00525	CR091_RS02080
CR091_RS02110	SM00382	ATPases associated with a variety of cellular activities
CR091_RS02125	SM00382	ATPases associated with a variety of cellular activities
CR091_RS02265	SM00873	B3/4 domain
CR091_RS02270	SM00567	E-Z type HEAT repeats
CR091_RS02285	SM00763	PrkA AAA domain
CR091_RS02380	SM00729	Elongator protein 3, MiaB family, Radical SAM
CR091_RS02380	SM00876	Biotin and Thiamin Synthesis associated domain
CR091_RS02390	SM00382	ATPases associated with a variety of cellular activities
CR091_RS02425	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CR091_RS02470	SM00257	Lysin motif
CR091_RS02485	SM00287	Bacterial SH3 domain homologues
CR091_RS02495	SM00155	Phospholipase D. Active site motifs.
CR091_RS02520	SM00354	helix_turn _helix lactose operon repressor
CR091_RS02555	SM00354	helix_turn _helix lactose operon repressor
CR091_RS02575	SM00344	helix_turn_helix ASNC type
CR091_RS02605	SM00363	S4 RNA-binding domain
CR091_RS02625	SM00864	Tubulin/FtsZ family, GTPase domain
CR091_RS02625	SM00865	Tubulin/FtsZ family, C-terminal domain
CR091_RS02655	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CR091_RS02675	SM00829	Enoylreductase
CR091_RS02695	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CR091_RS02695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS02785	SM00829	Enoylreductase
CR091_RS02795	SM00382	ATPases associated with a variety of cellular activities
CR091_RS02805	SM00062	Bacterial periplasmic substrate-binding proteins
CR091_RS02805	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CR091_RS02855	SM00855	Phosphoglycerate mutase family
CR091_RS02870	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS02870	SM01091	Transporter associated domain
CR091_RS02885	SM00382	ATPases associated with a variety of cellular activities
CR091_RS02930	SM00729	Elongator protein 3, MiaB family, Radical SAM
CR091_RS02945	SM00411	bacterial (prokaryotic) histone like domain
CR091_RS02955	SM00382	ATPases associated with a variety of cellular activities
CR091_RS02970	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CR091_RS03005	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS03050	SM00382	ATPases associated with a variety of cellular activities
CR091_RS03070	SM00014	Acid phosphatase homologues
CR091_RS03120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS03125	SM00342	helix_turn_helix, arabinose operon control protein
CR091_RS03125	SM00448	cheY-homologous receiver domain
CR091_RS03135	SM00849	Metallo-beta-lactamase superfamily
CR091_RS03275	SM00914	CR091_RS03275
CR091_RS03290	SM00822	CR091_RS03290
CR091_RS03385	SM00938	Nitrogen regulatory protein P-II
CR091_RS03395	SM00642	Alpha-amylase domain
CR091_RS03400	SM00354	helix_turn _helix lactose operon repressor
CR091_RS03425	SM00382	ATPases associated with a variety of cellular activities
CR091_RS03475	SM00100	Cyclic nucleotide-monophosphate binding domain
CR091_RS03475	SM00419	helix_turn_helix, cAMP Regulatory protein
CR091_RS03480	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CR091_RS03500	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CR091_RS03505	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CR091_RS03525	SM00382	ATPases associated with a variety of cellular activities
CR091_RS03525	SM01086	C-terminal, D2-small domain, of ClpB protein
CR091_RS03535	SM00342	helix_turn_helix, arabinose operon control protein
CR091_RS03585	SM00825	Beta-ketoacyl synthase
CR091_RS03595	SM00382	ATPases associated with a variety of cellular activities
CR091_RS03600	SM00382	ATPases associated with a variety of cellular activities
CR091_RS03650	SM00382	ATPases associated with a variety of cellular activities
CR091_RS03655	SM00382	ATPases associated with a variety of cellular activities
CR091_RS03705	SM00155	Phospholipase D. Active site motifs.
CR091_RS03740	SM01118	CR091_RS03740
CR091_RS03750	SM00954	Region found in RelA / SpoT proteins
CR091_RS03770	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS03770	SM00924	MgtE intracellular N domain
CR091_RS03880	SM01350	CR091_RS03880
CR091_RS03910	SM00344	helix_turn_helix ASNC type
CR091_RS03935	SM00487	DEAD-like helicases superfamily
CR091_RS03935	SM00490	helicase superfamily c-terminal domain
CR091_RS03955	SM00849	Metallo-beta-lactamase superfamily
CR091_RS03990	SM00091	PAS domain
CR091_RS03990	SM00382	ATPases associated with a variety of cellular activities
CR091_RS04005	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CR091_RS04005	SM00387	Histidine kinase-like ATPases
CR091_RS04010	SM00448	cheY-homologous receiver domain
CR091_RS04010	SM00850	LytTr DNA-binding domain
CR091_RS04040	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CR091_RS04090	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CR091_RS04120	SM00448	cheY-homologous receiver domain
CR091_RS04125	SM00387	Histidine kinase-like ATPases
CR091_RS04190	SM00382	ATPases associated with a variety of cellular activities
CR091_RS04210	SM00382	ATPases associated with a variety of cellular activities
CR091_RS04285	SM00091	PAS domain
CR091_RS04285	SM00387	Histidine kinase-like ATPases
CR091_RS04290	SM00448	cheY-homologous receiver domain
CR091_RS04325	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS04350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS04380	SM00091	PAS domain
CR091_RS04380	SM00387	Histidine kinase-like ATPases
CR091_RS04385	SM00448	cheY-homologous receiver domain
CR091_RS04415	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS04415	SM00382	ATPases associated with a variety of cellular activities
CR091_RS04495	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CR091_RS04495	SM01232	CR091_RS04495
CR091_RS04540	SM00382	ATPases associated with a variety of cellular activities
CR091_RS04565	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CR091_RS04595	SM00899	CR091_RS04595
CR091_RS04620	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS04625	SM00829	Enoylreductase
CR091_RS04630	SM00382	ATPases associated with a variety of cellular activities
CR091_RS04635	SM00382	ATPases associated with a variety of cellular activities
CR091_RS04660	SM00346	helix_turn_helix isocitrate lyase regulation
CR091_RS04675	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS04700	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS04705	SM00354	helix_turn _helix lactose operon repressor
CR091_RS04720	SM00382	ATPases associated with a variety of cellular activities
CR091_RS04740	SM00903	Flavin reductase like domain
CR091_RS04770	SM00267	diguanylate cyclase
CR091_RS04770	SM00448	cheY-homologous receiver domain
CR091_RS04790	SM00448	cheY-homologous receiver domain
CR091_RS04795	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CR091_RS04795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS04795	SM00387	Histidine kinase-like ATPases
CR091_RS04795	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS04795	SM00448	cheY-homologous receiver domain
CR091_RS04810	SM00855	Phosphoglycerate mutase family
CR091_RS04860	SM00642	Alpha-amylase domain
CR091_RS04865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS04865	SM00866	CR091_RS04865
CR091_RS04870	SM00796	Allophanate hydrolase subunit 1
CR091_RS04875	SM00797	Allophanate hydrolase subunit 2
CR091_RS04920	SM00829	Enoylreductase
CR091_RS04935	SM00796	Allophanate hydrolase subunit 1
CR091_RS04935	SM00797	Allophanate hydrolase subunit 2
CR091_RS04935	SM00878	Biotin carboxylase C-terminal domain
CR091_RS04965	SM00382	ATPases associated with a variety of cellular activities
CR091_RS04970	SM00357	Cold shock protein domain
CR091_RS05050	SM00854	Bacterial capsule synthesis protein PGA_cap
CR091_RS05285	SM00052	Putative diguanylate phosphodiesterase
CR091_RS05290	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CR091_RS05290	SM00091	PAS domain
CR091_RS05290	SM00267	diguanylate cyclase
CR091_RS05330	SM00387	Histidine kinase-like ATPases
CR091_RS05335	SM00448	cheY-homologous receiver domain
CR091_RS05360	SM00646	CR091_RS05360
CR091_RS05380	SM00914	CR091_RS05380
CR091_RS05390	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CR091_RS05405	SM00382	ATPases associated with a variety of cellular activities
CR091_RS05435	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS05465	SM00052	Putative diguanylate phosphodiesterase
CR091_RS05465	SM00267	diguanylate cyclase
CR091_RS05465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS05485	SM00052	Putative diguanylate phosphodiesterase
CR091_RS05485	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CR091_RS05485	SM00091	PAS domain
CR091_RS05485	SM00267	diguanylate cyclase
CR091_RS05555	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS05680	SM00382	ATPases associated with a variety of cellular activities
CR091_RS05720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS05720	SM00895	CR091_RS05720
CR091_RS05795	SM00465	GIY-YIG type nucleases (URI domain)
CR091_RS05805	SM00835	Cupin
CR091_RS05850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS05850	SM00866	CR091_RS05850
CR091_RS05905	SM00382	ATPases associated with a variety of cellular activities
CR091_RS05910	SM01091	Transporter associated domain
CR091_RS05915	SM00422	helix_turn_helix, mercury resistance
CR091_RS05960	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CR091_RS06015	SM00387	Histidine kinase-like ATPases
CR091_RS06020	SM00448	cheY-homologous receiver domain
CR091_RS06020	SM00850	LytTr DNA-binding domain
CR091_RS06025	SM00382	ATPases associated with a variety of cellular activities
CR091_RS06045	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS06070	SM00098	Alkaline phosphatase homologues
CR091_RS06075	SM00448	cheY-homologous receiver domain
CR091_RS06075	SM00850	LytTr DNA-binding domain
CR091_RS06080	SM00091	PAS domain
CR091_RS06080	SM00387	Histidine kinase-like ATPases
CR091_RS06080	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS06080	SM00448	cheY-homologous receiver domain
CR091_RS06115	SM00822	CR091_RS06115
CR091_RS06135	SM00729	Elongator protein 3, MiaB family, Radical SAM
CR091_RS06140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS06140	SM00895	CR091_RS06140
CR091_RS06170	SM00091	PAS domain
CR091_RS06170	SM00387	Histidine kinase-like ATPases
CR091_RS06170	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS06215	SM01007	Class II Aldolase and Adducin N-terminal domain
CR091_RS06230	SM00382	ATPases associated with a variety of cellular activities
CR091_RS06260	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS06270	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CR091_RS06270	SM00091	PAS domain
CR091_RS06270	SM00387	Histidine kinase-like ATPases
CR091_RS06270	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS06280	SM00382	ATPases associated with a variety of cellular activities
CR091_RS06280	SM01086	C-terminal, D2-small domain, of ClpB protein
CR091_RS06295	SM00822	CR091_RS06295
CR091_RS06370	SM00257	Lysin motif
CR091_RS06410	SM01018	B12 binding domain
CR091_RS06450	SM01061	CAT RNA binding domain
CR091_RS06510	SM00914	CR091_RS06510
CR091_RS06525	SM00260	Two component signalling adaptor domain
CR091_RS06525	SM00448	cheY-homologous receiver domain
CR091_RS06535	SM00257	Lysin motif
CR091_RS06565	SM00052	Putative diguanylate phosphodiesterase
CR091_RS06625	SM01350	CR091_RS06625
CR091_RS06630	SM00382	ATPases associated with a variety of cellular activities
CR091_RS06635	SM00382	ATPases associated with a variety of cellular activities
CR091_RS06645	SM00849	Metallo-beta-lactamase superfamily
CR091_RS06680	SM00861	Transketolase, pyrimidine binding domain
CR091_RS06745	SM00838	Elongation factor G C-terminus
CR091_RS06775	SM00670	Large family of predicted nucleotide-binding domains
CR091_RS06795	SM00878	Biotin carboxylase C-terminal domain
CR091_RS06840	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS06875	SM00851	MGS-like domain
CR091_RS06915	SM00479	CR091_RS06915
CR091_RS06915	SM00487	DEAD-like helicases superfamily
CR091_RS06915	SM00491	CR091_RS06915
CR091_RS06950	SM00478	endonuclease III
CR091_RS06950	SM00525	CR091_RS06950
CR091_RS07045	SM00357	Cold shock protein domain
CR091_RS07060	SM00267	diguanylate cyclase
CR091_RS07070	SM00487	DEAD-like helicases superfamily
CR091_RS07070	SM00490	helicase superfamily c-terminal domain
CR091_RS07115	SM00387	Histidine kinase-like ATPases
CR091_RS07120	SM00421	helix_turn_helix, Lux Regulon
CR091_RS07120	SM00448	cheY-homologous receiver domain
CR091_RS07125	SM00642	Alpha-amylase domain
CR091_RS07130	SM00981	CR091_RS07130
CR091_RS07155	SM00382	ATPases associated with a variety of cellular activities
CR091_RS07165	SM00491	CR091_RS07165
CR091_RS07265	SM00357	Cold shock protein domain
CR091_RS07280	SM00028	Tetratricopeptide repeats
CR091_RS07305	SM00382	ATPases associated with a variety of cellular activities
CR091_RS07325	SM00382	ATPases associated with a variety of cellular activities
CR091_RS07345	SM00052	Putative diguanylate phosphodiesterase
CR091_RS07345	SM00091	PAS domain
CR091_RS07345	SM00267	diguanylate cyclase
CR091_RS07375	SM00382	ATPases associated with a variety of cellular activities
CR091_RS07405	SM00421	helix_turn_helix, Lux Regulon
CR091_RS07405	SM00448	cheY-homologous receiver domain
CR091_RS07430	SM00155	Phospholipase D. Active site motifs.
CR091_RS07445	SM00257	Lysin motif
CR091_RS07445	SM00636	CR091_RS07445
CR091_RS07500	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS07515	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS07550	SM00382	ATPases associated with a variety of cellular activities
CR091_RS07595	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CR091_RS07615	SM00382	ATPases associated with a variety of cellular activities
CR091_RS07635	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CR091_RS07635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS07635	SM00387	Histidine kinase-like ATPases
CR091_RS07635	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS07635	SM00448	cheY-homologous receiver domain
CR091_RS07640	SM00138	Methyltransferase, chemotaxis proteins 
CR091_RS07645	SM00331	Sigma factor PP2C-like phosphatases
CR091_RS07645	SM00448	cheY-homologous receiver domain
CR091_RS07660	SM00100	Cyclic nucleotide-monophosphate binding domain
CR091_RS07680	SM00640	Glycosyl hydrolases family 32
CR091_RS07750	SM00849	Metallo-beta-lactamase superfamily
CR091_RS07785	SM00354	helix_turn _helix lactose operon repressor
CR091_RS07795	SM00640	Glycosyl hydrolases family 32
CR091_RS07810	SM00382	ATPases associated with a variety of cellular activities
CR091_RS07835	SM00640	Glycosyl hydrolases family 32
CR091_RS07885	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS07915	SM00382	ATPases associated with a variety of cellular activities
CR091_RS07955	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS07965	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS08050	SM00861	Transketolase, pyrimidine binding domain
CR091_RS08060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS08060	SM00895	CR091_RS08060
CR091_RS08205	SM00014	Acid phosphatase homologues
CR091_RS08240	SM00342	helix_turn_helix, arabinose operon control protein
CR091_RS08240	SM00871	Bacterial transcription activator, effector binding domain
CR091_RS08310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS08310	SM00866	CR091_RS08310
CR091_RS08350	SM00344	helix_turn_helix ASNC type
CR091_RS08425	SM00357	Cold shock protein domain
CR091_RS08480	SM00387	Histidine kinase-like ATPases
CR091_RS08485	SM00257	Lysin motif
CR091_RS08485	SM00636	CR091_RS08485
CR091_RS08515	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS08555	SM00226	Low molecular weight phosphatase family
CR091_RS08565	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS08575	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS08600	SM00849	Metallo-beta-lactamase superfamily
CR091_RS08610	SM00342	helix_turn_helix, arabinose operon control protein
CR091_RS08620	SM01120	CR091_RS08620
CR091_RS08645	SM00478	endonuclease III
CR091_RS08665	SM01022	CR091_RS08665
CR091_RS08670	SM00382	ATPases associated with a variety of cellular activities
CR091_RS08740	SM00422	helix_turn_helix, mercury resistance
CR091_RS08790	SM00860	SMI1 / KNR4 family
CR091_RS08935	SM00860	SMI1 / KNR4 family
CR091_RS08990	SM00382	ATPases associated with a variety of cellular activities
CR091_RS08995	SM00382	ATPases associated with a variety of cellular activities
CR091_RS09050	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
CR091_RS09065	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS09165	SM00861	Transketolase, pyrimidine binding domain
CR091_RS09180	SM00382	ATPases associated with a variety of cellular activities
CR091_RS09190	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS09245	SM00354	helix_turn _helix lactose operon repressor
CR091_RS09255	SM00858	CR091_RS09255
CR091_RS09260	SM00710	Parallel beta-helix repeats
CR091_RS09285	SM00914	CR091_RS09285
CR091_RS09295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS09295	SM00387	Histidine kinase-like ATPases
CR091_RS09295	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS09300	SM00448	cheY-homologous receiver domain
CR091_RS09300	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS09370	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS09380	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CR091_RS09380	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CR091_RS09380	SM00493	CR091_RS09380
CR091_RS09420	SM01329	CR091_RS09420
CR091_RS09445	SM00028	Tetratricopeptide repeats
CR091_RS09445	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS09475	SM00450	Rhodanese Homology Domain
CR091_RS09550	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CR091_RS09555	SM00382	ATPases associated with a variety of cellular activities
CR091_RS09560	SM00567	E-Z type HEAT repeats
CR091_RS09560	SM00932	Scaffold protein Nfu/NifU N terminal
CR091_RS09620	SM00855	Phosphoglycerate mutase family
CR091_RS09640	SM00422	helix_turn_helix, mercury resistance
CR091_RS09645	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CR091_RS09655	SM00465	GIY-YIG type nucleases (URI domain)
CR091_RS09665	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CR091_RS09665	SM00475	5'-3' exonuclease
CR091_RS09710	SM00966	SpoVT / AbrB like domain 
CR091_RS09785	SM00387	Histidine kinase-like ATPases
CR091_RS09785	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS09800	SM00642	Alpha-amylase domain
CR091_RS09860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS09880	SM00448	cheY-homologous receiver domain
CR091_RS09880	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS09885	SM00387	Histidine kinase-like ATPases
CR091_RS09885	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS09905	SM00919	Malic enzyme, NAD binding domain
CR091_RS09905	SM01274	CR091_RS09905
CR091_RS09940	SM00062	Bacterial periplasmic substrate-binding proteins
CR091_RS09955	SM00382	ATPases associated with a variety of cellular activities
CR091_RS09960	SM00904	Riboflavin kinase
CR091_RS09975	SM00646	CR091_RS09975
CR091_RS09990	SM00644	CR091_RS09990
CR091_RS10020	SM00919	Malic enzyme, NAD binding domain
CR091_RS10020	SM01274	CR091_RS10020
CR091_RS10065	SM00422	helix_turn_helix, mercury resistance
CR091_RS10145	SM00155	Phospholipase D. Active site motifs.
CR091_RS10160	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS10210	SM00448	cheY-homologous receiver domain
CR091_RS10210	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS10215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS10215	SM00387	Histidine kinase-like ATPases
CR091_RS10215	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS10245	SM00382	ATPases associated with a variety of cellular activities
CR091_RS10255	SM00448	cheY-homologous receiver domain
CR091_RS10255	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS10260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS10260	SM00387	Histidine kinase-like ATPases
CR091_RS10260	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS10265	SM00382	ATPases associated with a variety of cellular activities
CR091_RS10290	SM00420	helix_turn_helix, Deoxyribose operon repressor
CR091_RS10290	SM01134	CR091_RS10290
CR091_RS10325	SM00422	helix_turn_helix, mercury resistance
CR091_RS10335	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS10365	SM00257	Lysin motif
CR091_RS10370	SM00354	helix_turn _helix lactose operon repressor
CR091_RS10455	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS10475	SM00382	ATPases associated with a variety of cellular activities
CR091_RS10480	SM00327	von Willebrand factor (vWF) type A domain
CR091_RS10490	SM01038	Beta galactosidase small chain
CR091_RS10495	SM00342	helix_turn_helix, arabinose operon control protein
CR091_RS10510	SM00382	ATPases associated with a variety of cellular activities
CR091_RS10580	SM00448	cheY-homologous receiver domain
CR091_RS10580	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS10590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS10645	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS10655	SM00710	Parallel beta-helix repeats
CR091_RS10715	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS10800	SM00382	ATPases associated with a variety of cellular activities
CR091_RS10825	SM00382	ATPases associated with a variety of cellular activities
CR091_RS10875	SM00316	Ribosomal protein S1-like RNA-binding domain
CR091_RS10910	SM00342	helix_turn_helix, arabinose operon control protein
CR091_RS10920	SM00382	ATPases associated with a variety of cellular activities
CR091_RS10950	SM00382	ATPases associated with a variety of cellular activities
CR091_RS10965	SM00354	helix_turn _helix lactose operon repressor
CR091_RS10995	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CR091_RS10995	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CR091_RS10995	SM00493	CR091_RS10995
CR091_RS11040	SM00155	Phospholipase D. Active site motifs.
CR091_RS11095	SM00091	PAS domain
CR091_RS11095	SM00387	Histidine kinase-like ATPases
CR091_RS11095	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS11100	SM00382	ATPases associated with a variety of cellular activities
CR091_RS11100	SM00448	cheY-homologous receiver domain
CR091_RS11115	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CR091_RS11135	SM00829	Enoylreductase
CR091_RS11190	SM00341	Helicase and RNase D C-terminal
CR091_RS11190	SM00487	DEAD-like helicases superfamily
CR091_RS11190	SM00490	helicase superfamily c-terminal domain
CR091_RS11190	SM00956	CR091_RS11190
CR091_RS11195	SM00091	PAS domain
CR091_RS11195	SM00382	ATPases associated with a variety of cellular activities
CR091_RS11215	SM00490	helicase superfamily c-terminal domain
CR091_RS11230	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CR091_RS11255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS11260	SM00382	ATPases associated with a variety of cellular activities
CR091_RS11290	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS11300	SM00849	Metallo-beta-lactamase superfamily
CR091_RS11315	SM00257	Lysin motif
CR091_RS11320	SM00382	ATPases associated with a variety of cellular activities
CR091_RS11335	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CR091_RS11335	SM00138	Methyltransferase, chemotaxis proteins 
CR091_RS11335	SM00387	Histidine kinase-like ATPases
CR091_RS11335	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS11345	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CR091_RS11425	SM00028	Tetratricopeptide repeats
CR091_RS11475	SM00479	CR091_RS11475
CR091_RS11500	SM00641	Glycosyl hydrolases family 25
CR091_RS11510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CR091_RS11510	SM00091	PAS domain
CR091_RS11510	SM00387	Histidine kinase-like ATPases
CR091_RS11510	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS11640	SM00091	PAS domain
CR091_RS11640	SM00387	Histidine kinase-like ATPases
CR091_RS11640	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS11710	SM00829	Enoylreductase
CR091_RS11730	SM00882	Coenzyme A transferase
CR091_RS11735	SM00882	Coenzyme A transferase
CR091_RS11785	SM00849	Metallo-beta-lactamase superfamily
CR091_RS11880	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS11900	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS11905	SM00849	Metallo-beta-lactamase superfamily
CR091_RS11920	SM00450	Rhodanese Homology Domain
CR091_RS11975	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CR091_RS11980	SM00641	Glycosyl hydrolases family 25
CR091_RS11995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS12010	SM00155	Phospholipase D. Active site motifs.
CR091_RS12015	SM00849	Metallo-beta-lactamase superfamily
CR091_RS12020	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CR091_RS12100	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS12165	SM00838	Elongation factor G C-terminus
CR091_RS12165	SM00889	Elongation factor G, domain IV
CR091_RS12205	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CR091_RS12205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS12245	SM00346	helix_turn_helix isocitrate lyase regulation
CR091_RS12250	SM00878	Biotin carboxylase C-terminal domain
CR091_RS12260	SM00797	Allophanate hydrolase subunit 2
CR091_RS12265	SM00796	Allophanate hydrolase subunit 1
CR091_RS12285	SM00642	Alpha-amylase domain
CR091_RS12310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS12310	SM00387	Histidine kinase-like ATPases
CR091_RS12310	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS12315	SM00448	cheY-homologous receiver domain
CR091_RS12315	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS12325	SM00829	Enoylreductase
CR091_RS12425	SM00487	DEAD-like helicases superfamily
CR091_RS12425	SM00490	helicase superfamily c-terminal domain
CR091_RS12440	SM00421	helix_turn_helix, Lux Regulon
CR091_RS12440	SM00448	cheY-homologous receiver domain
CR091_RS12445	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CR091_RS12460	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS12470	SM00773	Proposed nucleic acid binding domain
CR091_RS12490	SM01131	CR091_RS12490
CR091_RS12520	SM00563	Phosphate acyltransferases
CR091_RS12575	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS12670	SM00434	DNA Topoisomerase IV
CR091_RS12675	SM00387	Histidine kinase-like ATPases
CR091_RS12675	SM00433	TopoisomeraseII
CR091_RS12680	SM00881	CoA binding domain
CR091_RS12685	SM01207	CR091_RS12685
CR091_RS12750	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CR091_RS12780	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CR091_RS12785	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CR091_RS12850	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS12930	SM00422	helix_turn_helix, mercury resistance
CR091_RS12940	SM00947	Carbonic anhydrase
CR091_RS12950	SM00448	cheY-homologous receiver domain
CR091_RS12950	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS12955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS12955	SM00387	Histidine kinase-like ATPases
CR091_RS12955	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS12965	SM00860	SMI1 / KNR4 family
CR091_RS13080	SM00914	CR091_RS13080
CR091_RS13110	SM00919	Malic enzyme, NAD binding domain
CR091_RS13110	SM01274	CR091_RS13110
CR091_RS13125	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CR091_RS13200	SM00914	CR091_RS13200
CR091_RS13225	SM00382	ATPases associated with a variety of cellular activities
CR091_RS13235	SM00421	helix_turn_helix, Lux Regulon
CR091_RS13235	SM00448	cheY-homologous receiver domain
CR091_RS13305	SM00248	ankyrin repeats
CR091_RS13320	SM00248	ankyrin repeats
CR091_RS13340	SM00860	SMI1 / KNR4 family
CR091_RS13445	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS13465	SM00420	helix_turn_helix, Deoxyribose operon repressor
CR091_RS13465	SM01134	CR091_RS13465
CR091_RS13520	SM00382	ATPases associated with a variety of cellular activities
CR091_RS13535	SM00357	Cold shock protein domain
CR091_RS13540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS13555	SM00357	Cold shock protein domain
CR091_RS13590	SM00829	Enoylreductase
CR091_RS13600	SM00850	LytTr DNA-binding domain
CR091_RS13615	SM00257	Lysin motif
CR091_RS13630	SM00835	Cupin
CR091_RS13725	SM00860	SMI1 / KNR4 family
CR091_RS13835	SM00382	ATPases associated with a variety of cellular activities
CR091_RS13860	SM00354	helix_turn _helix lactose operon repressor
CR091_RS13915	SM00091	PAS domain
CR091_RS13915	SM00382	ATPases associated with a variety of cellular activities
CR091_RS13920	SM00849	Metallo-beta-lactamase superfamily
CR091_RS13955	SM00062	Bacterial periplasmic substrate-binding proteins
CR091_RS14000	SM01133	CR091_RS14000
CR091_RS14005	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CR091_RS14020	SM00507	HNH nucleases
CR091_RS14045	SM01207	CR091_RS14045
CR091_RS14055	SM00849	Metallo-beta-lactamase superfamily
CR091_RS14110	SM00854	Bacterial capsule synthesis protein PGA_cap
CR091_RS14120	SM00052	Putative diguanylate phosphodiesterase
CR091_RS14190	SM00829	Enoylreductase
CR091_RS14195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS14195	SM00895	CR091_RS14195
CR091_RS14225	SM01091	Transporter associated domain
CR091_RS14250	SM00382	ATPases associated with a variety of cellular activities
CR091_RS14255	SM00382	ATPases associated with a variety of cellular activities
CR091_RS14300	SM00318	Staphylococcal nuclease homologues
CR091_RS14305	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CR091_RS14370	SM00346	helix_turn_helix isocitrate lyase regulation
CR091_RS14425	SM00382	ATPases associated with a variety of cellular activities
CR091_RS14525	SM00387	Histidine kinase-like ATPases
CR091_RS14525	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS14530	SM00448	cheY-homologous receiver domain
CR091_RS14530	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS14560	SM00861	Transketolase, pyrimidine binding domain
CR091_RS14600	SM00871	Bacterial transcription activator, effector binding domain
CR091_RS14640	SM00938	Nitrogen regulatory protein P-II
CR091_RS14690	SM01324	CR091_RS14690
CR091_RS14725	SM00382	ATPases associated with a variety of cellular activities
CR091_RS14770	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CR091_RS14775	SM00354	helix_turn _helix lactose operon repressor
CR091_RS14815	SM00563	Phosphate acyltransferases
CR091_RS14850	SM00988	UreE urease accessory protein, N-terminal domain
CR091_RS14875	SM00257	Lysin motif
CR091_RS14880	SM00257	Lysin motif
CR091_RS14925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS14945	SM00382	ATPases associated with a variety of cellular activities
CR091_RS14995	SM01091	Transporter associated domain
CR091_RS15010	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS15045	SM00830	Chorismate mutase type II
CR091_RS15095	SM01060	CR091_RS15095
CR091_RS15160	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS15200	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS15230	SM00287	Bacterial SH3 domain homologues
CR091_RS15230	SM00646	CR091_RS15230
CR091_RS15240	SM00966	SpoVT / AbrB like domain 
CR091_RS15255	SM00240	Forkhead associated domain
CR091_RS15255	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS15290	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CR091_RS15325	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CR091_RS15325	SM00091	PAS domain
CR091_RS15380	SM00422	helix_turn_helix, mercury resistance
CR091_RS15395	SM00870	CR091_RS15395
CR091_RS15400	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS15415	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS15465	SM00919	Malic enzyme, NAD binding domain
CR091_RS15465	SM01274	CR091_RS15465
CR091_RS15515	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS15520	SM00422	helix_turn_helix, mercury resistance
CR091_RS15690	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS15715	SM00257	Lysin motif
CR091_RS15715	SM00646	CR091_RS15715
CR091_RS15765	SM00829	Enoylreductase
CR091_RS15780	SM00871	Bacterial transcription activator, effector binding domain
CR091_RS15875	SM00357	Cold shock protein domain
CR091_RS15925	SM00382	ATPases associated with a variety of cellular activities
CR091_RS15940	SM00257	Lysin motif
CR091_RS16000	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS16010	SM00354	helix_turn _helix lactose operon repressor
CR091_RS16090	SM00342	helix_turn_helix, arabinose operon control protein
CR091_RS16100	SM00421	helix_turn_helix, Lux Regulon
CR091_RS16100	SM00448	cheY-homologous receiver domain
CR091_RS16150	SM01350	CR091_RS16150
CR091_RS16155	SM00861	Transketolase, pyrimidine binding domain
CR091_RS16170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CR091_RS16195	SM00382	ATPases associated with a variety of cellular activities
CR091_RS16205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS16205	SM00387	Histidine kinase-like ATPases
CR091_RS16205	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS16210	SM00448	cheY-homologous receiver domain
CR091_RS16210	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS16230	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CR091_RS16230	SM00387	Histidine kinase-like ATPases
CR091_RS16230	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS16255	SM00422	helix_turn_helix, mercury resistance
CR091_RS16275	SM00342	helix_turn_helix, arabinose operon control protein
CR091_RS16320	SM00382	ATPases associated with a variety of cellular activities
CR091_RS16450	SM00448	cheY-homologous receiver domain
CR091_RS16450	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS16455	SM00387	Histidine kinase-like ATPases
CR091_RS16460	SM00382	ATPases associated with a variety of cellular activities
CR091_RS16505	SM00450	Rhodanese Homology Domain
CR091_RS16505	SM00849	Metallo-beta-lactamase superfamily
CR091_RS16510	SM00450	Rhodanese Homology Domain
CR091_RS16515	SM00450	Rhodanese Homology Domain
CR091_RS16520	SM00450	Rhodanese Homology Domain
CR091_RS16590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS16590	SM00866	CR091_RS16590
CR091_RS16610	SM00894	Excalibur calcium-binding domain
CR091_RS16620	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS16675	SM00267	diguanylate cyclase
CR091_RS16830	SM00357	Cold shock protein domain
CR091_RS16835	SM00357	Cold shock protein domain
CR091_RS16865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS16865	SM00895	CR091_RS16865
CR091_RS16900	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS16940	SM01001	AIR carboxylase
CR091_RS16990	SM00382	ATPases associated with a variety of cellular activities
CR091_RS17100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS17100	SM00387	Histidine kinase-like ATPases
CR091_RS17100	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS17105	SM00448	cheY-homologous receiver domain
CR091_RS17105	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS17120	SM00382	ATPases associated with a variety of cellular activities
CR091_RS17145	SM00857	Resolvase, N terminal domain
CR091_RS17190	SM00829	Enoylreductase
CR091_RS17195	SM00422	helix_turn_helix, mercury resistance
CR091_RS17235	SM00357	Cold shock protein domain
CR091_RS17245	SM00248	ankyrin repeats
CR091_RS17250	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CR091_RS17255	SM00091	PAS domain
CR091_RS17255	SM00267	diguanylate cyclase
CR091_RS17260	SM00287	Bacterial SH3 domain homologues
CR091_RS17305	SM00631	CR091_RS17305
CR091_RS17350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS17350	SM00895	CR091_RS17350
CR091_RS17380	SM00420	helix_turn_helix, Deoxyribose operon repressor
CR091_RS17380	SM01134	CR091_RS17380
CR091_RS17430	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS17480	SM01007	Class II Aldolase and Adducin N-terminal domain
CR091_RS17490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS17495	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CR091_RS17525	SM00899	CR091_RS17525
CR091_RS17565	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS17640	SM01130	CR091_RS17640
CR091_RS17660	SM00346	helix_turn_helix isocitrate lyase regulation
CR091_RS17735	SM00357	Cold shock protein domain
CR091_RS17745	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS17755	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS17780	SM00829	Enoylreductase
CR091_RS17815	SM00422	helix_turn_helix, mercury resistance
CR091_RS17830	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CR091_RS17845	SM00346	helix_turn_helix isocitrate lyase regulation
CR091_RS17855	SM00382	ATPases associated with a variety of cellular activities
CR091_RS17875	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS17905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS17905	SM00866	CR091_RS17905
CR091_RS17990	SM00028	Tetratricopeptide repeats
CR091_RS18000	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS18010	SM00344	helix_turn_helix ASNC type
CR091_RS18145	SM00640	Glycosyl hydrolases family 32
CR091_RS18150	SM00642	Alpha-amylase domain
CR091_RS18155	SM00354	helix_turn _helix lactose operon repressor
CR091_RS18240	SM00870	CR091_RS18240
CR091_RS18255	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CR091_RS18255	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CR091_RS18285	SM00014	Acid phosphatase homologues
CR091_RS18290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS18290	SM00387	Histidine kinase-like ATPases
CR091_RS18290	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS18295	SM00448	cheY-homologous receiver domain
CR091_RS18295	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS18300	SM00448	cheY-homologous receiver domain
CR091_RS18300	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS18355	SM01266	CR091_RS18355
CR091_RS18365	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS18450	SM00248	ankyrin repeats
CR091_RS18465	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS18475	SM00342	helix_turn_helix, arabinose operon control protein
CR091_RS18475	SM00871	Bacterial transcription activator, effector binding domain
CR091_RS18510	SM00852	Probable molybdopterin binding domain
CR091_RS18520	SM00852	Probable molybdopterin binding domain
CR091_RS18610	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS18635	SM00357	Cold shock protein domain
CR091_RS18690	SM00052	Putative diguanylate phosphodiesterase
CR091_RS18690	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CR091_RS18690	SM00267	diguanylate cyclase
CR091_RS18775	SM00422	helix_turn_helix, mercury resistance
CR091_RS18790	SM00422	helix_turn_helix, mercury resistance
CR091_RS18805	SM00640	Glycosyl hydrolases family 32
CR091_RS18845	SM00382	ATPases associated with a variety of cellular activities
CR091_RS18855	SM00387	Histidine kinase-like ATPases
CR091_RS18855	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS18860	SM00448	cheY-homologous receiver domain
CR091_RS18860	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS18925	SM00984	UDP binding domain
CR091_RS18950	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CR091_RS18955	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS19045	SM00344	helix_turn_helix ASNC type
CR091_RS19055	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CR091_RS19060	SM00448	cheY-homologous receiver domain
CR091_RS19060	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS19065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS19065	SM00387	Histidine kinase-like ATPases
CR091_RS19065	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS19080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS19080	SM00895	CR091_RS19080
CR091_RS19130	SM00382	ATPases associated with a variety of cellular activities
CR091_RS19175	SM00354	helix_turn _helix lactose operon repressor
CR091_RS19180	SM00387	Histidine kinase-like ATPases
CR091_RS19180	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS19205	SM01060	CR091_RS19205
CR091_RS19325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS19400	SM00849	Metallo-beta-lactamase superfamily
CR091_RS19440	SM00257	Lysin motif
CR091_RS19445	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS19445	SM01091	Transporter associated domain
CR091_RS19515	SM00382	ATPases associated with a variety of cellular activities
CR091_RS19520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS19555	SM00382	ATPases associated with a variety of cellular activities
CR091_RS19585	SM01061	CAT RNA binding domain
CR091_RS19635	SM00014	Acid phosphatase homologues
CR091_RS19645	SM00219	Tyrosine kinase, catalytic domain
CR091_RS19700	SM00882	Coenzyme A transferase
CR091_RS19705	SM00882	Coenzyme A transferase
CR091_RS19725	SM00091	PAS domain
CR091_RS19725	SM00387	Histidine kinase-like ATPases
CR091_RS19725	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS19760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS19760	SM00387	Histidine kinase-like ATPases
CR091_RS19760	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS19815	SM01006	Siderophore biosynthesis protein domain
CR091_RS19850	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CR091_RS19850	SM00091	PAS domain
CR091_RS19850	SM00387	Histidine kinase-like ATPases
CR091_RS19850	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS19870	SM00091	PAS domain
CR091_RS19870	SM00382	ATPases associated with a variety of cellular activities
CR091_RS19905	SM00382	ATPases associated with a variety of cellular activities
CR091_RS19910	SM00382	ATPases associated with a variety of cellular activities
CR091_RS19925	SM00861	Transketolase, pyrimidine binding domain
CR091_RS19935	SM00857	Resolvase, N terminal domain
CR091_RS19985	SM00257	Lysin motif
CR091_RS19985	SM00646	CR091_RS19985
CR091_RS19990	SM01230	CR091_RS19990
CR091_RS19995	SM00422	helix_turn_helix, mercury resistance
CR091_RS20015	SM00382	ATPases associated with a variety of cellular activities
CR091_RS20030	SM00853	MutL C terminal dimerisation domain
CR091_RS20030	SM01340	CR091_RS20030
CR091_RS20035	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CR091_RS20035	SM00534	ATPase domain of DNA mismatch repair MUTS family
CR091_RS20055	SM00729	Elongator protein 3, MiaB family, Radical SAM
CR091_RS20085	SM00322	K homology RNA-binding domain
CR091_RS20085	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CR091_RS20090	SM00382	ATPases associated with a variety of cellular activities
CR091_RS20095	SM00852	Probable molybdopterin binding domain
CR091_RS20105	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS20145	SM00382	ATPases associated with a variety of cellular activities
CR091_RS20155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS20155	SM00866	CR091_RS20155
CR091_RS20160	SM00382	ATPases associated with a variety of cellular activities
CR091_RS20160	SM00843	CR091_RS20160
CR091_RS20175	SM00849	Metallo-beta-lactamase superfamily
CR091_RS20180	SM01130	CR091_RS20180
CR091_RS20190	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CR091_RS20220	SM00316	Ribosomal protein S1-like RNA-binding domain
CR091_RS20220	SM00322	K homology RNA-binding domain
CR091_RS20225	SM01387	CR091_RS20225
CR091_RS20230	SM00904	Riboflavin kinase
CR091_RS20265	SM00316	Ribosomal protein S1-like RNA-binding domain
CR091_RS20265	SM00322	K homology RNA-binding domain
CR091_RS20275	SM00479	CR091_RS20275
CR091_RS20275	SM00481	DNA polymerase alpha chain like domain
CR091_RS20285	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CR091_RS20340	SM00260	Two component signalling adaptor domain
CR091_RS20345	SM00073	Histidine Phosphotransfer domain
CR091_RS20345	SM00260	Two component signalling adaptor domain
CR091_RS20345	SM00387	Histidine kinase-like ATPases
CR091_RS20345	SM01231	CR091_RS20345
CR091_RS20350	SM00448	cheY-homologous receiver domain
CR091_RS20360	SM00382	ATPases associated with a variety of cellular activities
CR091_RS20360	SM00962	SRP54-type protein, GTPase domain
CR091_RS20395	SM00448	cheY-homologous receiver domain
CR091_RS20445	SM00382	ATPases associated with a variety of cellular activities
CR091_RS20485	SM00382	ATPases associated with a variety of cellular activities
CR091_RS20485	SM01086	C-terminal, D2-small domain, of ClpB protein
CR091_RS20505	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CR091_RS20505	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CR091_RS20505	SM00493	CR091_RS20505
CR091_RS20515	SM00881	CoA binding domain
CR091_RS20570	SM00382	ATPases associated with a variety of cellular activities
CR091_RS20570	SM00962	SRP54-type protein, GTPase domain
CR091_RS20570	SM00963	SRP54-type protein, helical bundle domain
CR091_RS20580	SM00382	ATPases associated with a variety of cellular activities
CR091_RS20580	SM00962	SRP54-type protein, GTPase domain
CR091_RS20580	SM00963	SRP54-type protein, helical bundle domain
CR091_RS20585	SM00968	SMC proteins Flexible Hinge Domain
CR091_RS20590	SM00358	Double-stranded RNA binding motif
CR091_RS20590	SM00535	Ribonuclease III family
CR091_RS20600	SM00822	CR091_RS20600
CR091_RS20605	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CR091_RS20620	SM00487	DEAD-like helicases superfamily
CR091_RS20620	SM00490	helicase superfamily c-terminal domain
CR091_RS20640	SM01120	CR091_RS20640
CR091_RS20640	SM01121	CR091_RS20640
CR091_RS20660	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CR091_RS20675	SM00220	Serine/Threonine protein kinases, catalytic domain
CR091_RS20675	SM00740	CR091_RS20675
CR091_RS20680	SM00331	Sigma factor PP2C-like phosphatases
CR091_RS20680	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CR091_RS20705	SM00487	DEAD-like helicases superfamily
CR091_RS20705	SM00490	helicase superfamily c-terminal domain
CR091_RS20715	SM01409	CR091_RS20715
CR091_RS20720	SM00072	Guanylate kinase homologues.
CR091_RS20735	SM00831	Cation transporter/ATPase, N-terminus
CR091_RS20750	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CR091_RS20765	SM00851	MGS-like domain
CR091_RS20765	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CR091_RS20765	SM01209	CR091_RS20765
CR091_RS20770	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CR091_RS20795	SM00363	S4 RNA-binding domain
CR091_RS20820	SM00363	S4 RNA-binding domain
CR091_RS20865	SM00864	Tubulin/FtsZ family, GTPase domain
CR091_RS20865	SM00865	Tubulin/FtsZ family, C-terminal domain
CR091_RS20870	SM00842	Cell division protein FtsA
CR091_RS20905	SM00740	CR091_RS20905
CR091_RS20910	SM00740	CR091_RS20910
CR091_RS20950	SM00878	Biotin carboxylase C-terminal domain
CR091_RS20985	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CR091_RS21070	SM00914	CR091_RS21070
CR091_RS21075	SM00028	Tetratricopeptide repeats
CR091_RS21135	SM00138	Methyltransferase, chemotaxis proteins 
CR091_RS21140	SM00562	CR091_RS21140
CR091_RS21170	SM00411	bacterial (prokaryotic) histone like domain
CR091_RS21215	SM01240	CR091_RS21215
CR091_RS21220	SM00316	Ribosomal protein S1-like RNA-binding domain
CR091_RS21225	SM00563	Phosphate acyltransferases
CR091_RS21255	SM00870	CR091_RS21255
CR091_RS21265	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CR091_RS21275	SM00422	helix_turn_helix, mercury resistance
CR091_RS21300	SM00487	DEAD-like helicases superfamily
CR091_RS21300	SM00490	helicase superfamily c-terminal domain
CR091_RS21325	SM00257	Lysin motif
CR091_RS21330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS21330	SM00387	Histidine kinase-like ATPases
CR091_RS21330	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS21335	SM00448	cheY-homologous receiver domain
CR091_RS21335	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS21355	SM00363	S4 RNA-binding domain
CR091_RS21455	SM00387	Histidine kinase-like ATPases
CR091_RS21465	SM00936	Penicillin-binding protein 5, C-terminal domain 
CR091_RS21520	SM00882	Coenzyme A transferase
CR091_RS21525	SM00882	Coenzyme A transferase
CR091_RS21550	SM00704	CDGSH-type zinc finger. Function unknown.
CR091_RS21560	SM00849	Metallo-beta-lactamase superfamily
CR091_RS21645	SM00382	ATPases associated with a variety of cellular activities
CR091_RS21655	SM00062	Bacterial periplasmic substrate-binding proteins
CR091_RS21655	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CR091_RS21685	SM00861	Transketolase, pyrimidine binding domain
CR091_RS21705	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CR091_RS21715	SM00091	PAS domain
CR091_RS21715	SM00382	ATPases associated with a variety of cellular activities
CR091_RS21740	SM00448	cheY-homologous receiver domain
CR091_RS21745	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CR091_RS21760	SM00363	S4 RNA-binding domain
CR091_RS21765	SM00861	Transketolase, pyrimidine binding domain
CR091_RS21795	SM00878	Biotin carboxylase C-terminal domain
CR091_RS21840	SM00382	ATPases associated with a variety of cellular activities
CR091_RS21850	SM00841	Elongation factor P, C-terminal
CR091_RS21850	SM01185	CR091_RS21850
CR091_RS21885	SM00529	Helix-turn-helix diphteria tox regulatory element
CR091_RS21900	SM00450	Rhodanese Homology Domain
CR091_RS21920	SM00487	DEAD-like helicases superfamily
CR091_RS21920	SM00490	helicase superfamily c-terminal domain
CR091_RS21965	SM00382	ATPases associated with a variety of cellular activities
CR091_RS21980	SM00849	Metallo-beta-lactamase superfamily
CR091_RS21990	SM00631	CR091_RS21990
CR091_RS22005	SM00028	Tetratricopeptide repeats
CR091_RS22045	SM00382	ATPases associated with a variety of cellular activities
CR091_RS22140	SM00382	ATPases associated with a variety of cellular activities
CR091_RS22150	SM00518	AP endonuclease family 2
CR091_RS22155	SM00487	DEAD-like helicases superfamily
CR091_RS22155	SM00490	helicase superfamily c-terminal domain
CR091_RS22195	SM00400	zinc finger
CR091_RS22195	SM00493	CR091_RS22195
CR091_RS22210	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS22245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CR091_RS22250	SM00322	K homology RNA-binding domain
CR091_RS22270	SM00244	prohibitin homologues
CR091_RS22290	SM00729	Elongator protein 3, MiaB family, Radical SAM
CR091_RS22305	SM00271	DnaJ molecular chaperone homology domain
CR091_RS22325	SM00729	Elongator protein 3, MiaB family, Radical SAM
CR091_RS22330	SM00838	Elongation factor G C-terminus
CR091_RS22360	SM00849	Metallo-beta-lactamase superfamily
CR091_RS22370	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CR091_RS22390	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CR091_RS22400	SM01103	CR091_RS22400
CR091_RS22495	SM00382	ATPases associated with a variety of cellular activities
CR091_RS22525	SM00732	Likely ribonuclease with RNase H fold.
CR091_RS22535	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CR091_RS22555	SM00382	ATPases associated with a variety of cellular activities
CR091_RS22560	SM00028	Tetratricopeptide repeats
CR091_RS22580	SM00382	ATPases associated with a variety of cellular activities
CR091_RS22625	SM00287	Bacterial SH3 domain homologues
CR091_RS22625	SM00646	CR091_RS22625
CR091_RS22635	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CR091_RS22635	SM00954	Region found in RelA / SpoT proteins
CR091_RS22675	SM01323	CR091_RS22675
CR091_RS22695	SM00382	ATPases associated with a variety of cellular activities
CR091_RS22700	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CR091_RS22725	SM00257	Lysin motif
CR091_RS22770	SM01317	CR091_RS22770
CR091_RS22790	SM00316	Ribosomal protein S1-like RNA-binding domain
CR091_RS22880	SM00257	Lysin motif
CR091_RS22890	SM01004	Delta-aminolevulinic acid dehydratase
CR091_RS22925	SM00382	ATPases associated with a variety of cellular activities
CR091_RS22925	SM00464	Found in ATP-dependent protease La (LON)
CR091_RS22930	SM00382	ATPases associated with a variety of cellular activities
CR091_RS22935	SM00382	ATPases associated with a variety of cellular activities
CR091_RS22935	SM00994	ClpX C4-type zinc finger
CR091_RS22935	SM01086	C-terminal, D2-small domain, of ClpB protein
CR091_RS22960	SM01329	CR091_RS22960
CR091_RS22965	SM00917	LeuA allosteric (dimerisation) domain
CR091_RS23005	SM00909	Sporulation and spore germination
CR091_RS23015	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS23060	SM00062	Bacterial periplasmic substrate-binding proteins
CR091_RS23065	SM00382	ATPases associated with a variety of cellular activities
CR091_RS23085	SM00421	helix_turn_helix, Lux Regulon
CR091_RS23120	SM00465	GIY-YIG type nucleases (URI domain)
CR091_RS23135	SM00893	Electron transfer flavoprotein domain
CR091_RS23140	SM00893	Electron transfer flavoprotein domain
CR091_RS23175	SM00463	Small MutS-related domain
CR091_RS23175	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CR091_RS23175	SM00534	ATPase domain of DNA mismatch repair MUTS family
CR091_RS23180	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CR091_RS23180	SM00481	DNA polymerase alpha chain like domain
CR091_RS23180	SM00483	DNA polymerase X family
CR091_RS23200	SM00873	B3/4 domain
CR091_RS23200	SM00874	tRNA synthetase B5 domain
CR091_RS23200	SM00896	Ferredoxin-fold anticodon binding domain
CR091_RS23210	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CR091_RS23255	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CR091_RS23290	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CR091_RS23305	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CR091_RS23305	SM01232	CR091_RS23305
CR091_RS23310	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CR091_RS23310	SM00474	3'-5' exonuclease
CR091_RS23310	SM00475	5'-3' exonuclease
CR091_RS23310	SM00482	DNA polymerase A domain
CR091_RS23315	SM00091	PAS domain
CR091_RS23315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS23315	SM00387	Histidine kinase-like ATPases
CR091_RS23315	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS23320	SM00448	cheY-homologous receiver domain
CR091_RS23320	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS23335	SM01329	CR091_RS23335
CR091_RS23375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CR091_RS23380	SM00919	Malic enzyme, NAD binding domain
CR091_RS23380	SM01274	CR091_RS23380
CR091_RS23385	SM00481	DNA polymerase alpha chain like domain
CR091_RS23410	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS23420	SM00849	Metallo-beta-lactamase superfamily
CR091_RS23425	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CR091_RS23425	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CR091_RS23505	SM00981	CR091_RS23505
CR091_RS23535	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CR091_RS23540	SM00363	S4 RNA-binding domain
CR091_RS23540	SM01390	CR091_RS23540
CR091_RS23545	SM00363	S4 RNA-binding domain
CR091_RS23560	SM00116	Domain in cystathionine beta-synthase and other proteins.
CR091_RS23580	SM00354	helix_turn _helix lactose operon repressor
CR091_RS23585	SM00830	Chorismate mutase type II
CR091_RS23620	SM00382	ATPases associated with a variety of cellular activities
CR091_RS23620	SM00843	CR091_RS23620
CR091_RS23655	SM00849	Metallo-beta-lactamase superfamily
CR091_RS23675	SM00642	Alpha-amylase domain
CR091_RS23705	SM00420	helix_turn_helix, Deoxyribose operon repressor
CR091_RS23710	SM00363	S4 RNA-binding domain
CR091_RS23730	SM00450	Rhodanese Homology Domain
CR091_RS23760	SM00729	Elongator protein 3, MiaB family, Radical SAM
CR091_RS23785	SM00014	Acid phosphatase homologues
CR091_RS23820	SM00382	ATPases associated with a variety of cellular activities
CR091_RS23855	SM01234	CR091_RS23855
CR091_RS23860	SM00947	Carbonic anhydrase
CR091_RS23865	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CR091_RS23925	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CR091_RS23985	SM00642	Alpha-amylase domain
CR091_RS24230	SM00316	Ribosomal protein S1-like RNA-binding domain
CR091_RS24240	SM00344	helix_turn_helix ASNC type
CR091_RS24265	SM01298	CR091_RS24265
CR091_RS24270	SM00479	CR091_RS24270
CR091_RS24285	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CR091_RS24425	SM00729	Elongator protein 3, MiaB family, Radical SAM
CR091_RS24475	SM00382	ATPases associated with a variety of cellular activities
CR091_RS24495	SM00382	ATPases associated with a variety of cellular activities
CR091_RS24495	SM00930	CR091_RS24495
CR091_RS24505	SM00493	CR091_RS24505
CR091_RS24560	SM00382	ATPases associated with a variety of cellular activities
CR091_RS24630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS24630	SM00387	Histidine kinase-like ATPases
CR091_RS24630	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS24635	SM00448	cheY-homologous receiver domain
CR091_RS24635	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS24645	SM00014	Acid phosphatase homologues
CR091_RS24650	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS24675	SM00852	Probable molybdopterin binding domain
CR091_RS24690	SM00729	Elongator protein 3, MiaB family, Radical SAM
CR091_RS24705	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CR091_RS24705	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CR091_RS24735	SM00316	Ribosomal protein S1-like RNA-binding domain
CR091_RS24735	SM00357	Cold shock protein domain
CR091_RS24735	SM00955	CR091_RS24735
CR091_RS24750	SM01192	CR091_RS24750
CR091_RS24750	SM01193	CR091_RS24750
CR091_RS24770	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CR091_RS24835	SM00028	Tetratricopeptide repeats
CR091_RS24920	SM00382	ATPases associated with a variety of cellular activities
CR091_RS24925	SM00487	DEAD-like helicases superfamily
CR091_RS24925	SM00490	helicase superfamily c-terminal domain
CR091_RS24930	SM00091	PAS domain
CR091_RS24930	SM00382	ATPases associated with a variety of cellular activities
CR091_RS24945	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CR091_RS24950	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CR091_RS24950	SM00245	tail specific protease
CR091_RS24965	SM00382	ATPases associated with a variety of cellular activities
CR091_RS25000	SM00957	SecA DEAD-like domain
CR091_RS25000	SM00958	SecA preprotein cross-linking domain
CR091_RS25100	SM00487	DEAD-like helicases superfamily
CR091_RS25100	SM00490	helicase superfamily c-terminal domain
CR091_RS25120	SM00421	helix_turn_helix, Lux Regulon
CR091_RS25120	SM00448	cheY-homologous receiver domain
CR091_RS25125	SM00387	Histidine kinase-like ATPases
CR091_RS25150	SM00244	prohibitin homologues
CR091_RS25160	SM00984	UDP binding domain
CR091_RS25175	SM00487	DEAD-like helicases superfamily
CR091_RS25175	SM00490	helicase superfamily c-terminal domain
CR091_RS25180	SM00257	Lysin motif
CR091_RS25195	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS25255	SM00382	ATPases associated with a variety of cellular activities
CR091_RS25330	SM00226	Low molecular weight phosphatase family
CR091_RS25360	SM00937	CR091_RS25360
CR091_RS25375	SM00357	Cold shock protein domain
CR091_RS25375	SM00382	ATPases associated with a variety of cellular activities
CR091_RS25375	SM00959	Rho termination factor, N-terminal domain
CR091_RS25395	SM00448	cheY-homologous receiver domain
CR091_RS25450	SM00155	Phospholipase D. Active site motifs.
CR091_RS25460	SM00836	DALR anticodon binding domain
CR091_RS25460	SM01016	Arginyl tRNA synthetase N terminal dom
CR091_RS25505	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CR091_RS25555	SM00986	Uracil DNA glycosylase superfamily
CR091_RS25555	SM00987	UreE urease accessory protein, C-terminal domain 
CR091_RS25570	SM01350	CR091_RS25570
CR091_RS25580	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CR091_RS25580	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CR091_RS25655	SM00382	ATPases associated with a variety of cellular activities
CR091_RS25660	SM00382	ATPases associated with a variety of cellular activities
CR091_RS25685	SM00354	helix_turn _helix lactose operon repressor
CR091_RS25715	SM01060	CR091_RS25715
CR091_RS25725	SM00642	Alpha-amylase domain
CR091_RS25735	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CR091_RS25745	SM00448	cheY-homologous receiver domain
CR091_RS25745	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS25750	SM00387	Histidine kinase-like ATPases
CR091_RS25750	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS25770	SM00487	DEAD-like helicases superfamily
CR091_RS25770	SM00490	helicase superfamily c-terminal domain
CR091_RS25790	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CR091_RS25795	SM00849	Metallo-beta-lactamase superfamily
CR091_RS25810	SM00091	PAS domain
CR091_RS25810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CR091_RS25810	SM00387	Histidine kinase-like ATPases
CR091_RS25810	SM00388	His Kinase A (phosphoacceptor) domain
CR091_RS25815	SM00448	cheY-homologous receiver domain
CR091_RS25815	SM00862	Transcriptional regulatory protein, C terminal
CR091_RS25840	SM00788	Adenylosuccinate synthetase
CR091_RS25855	SM00267	diguanylate cyclase
CR091_RS25905	SM00470	ParB-like nuclease domain
CR091_RS25915	SM00470	ParB-like nuclease domain
CR091_RS25925	SM01228	CR091_RS25925
CR091_RS25935	SM00393	Putative single-stranded nucleic acids-binding domain
CR091_RS25935	SM01245	CR091_RS25935
CR091_RS25970	SM00382	ATPases associated with a variety of cellular activities
CR091_RS25975	SM00850	LytTr DNA-binding domain
CR091_RS25990	SM00857	Resolvase, N terminal domain
CR091_RS26225	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS26230	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS26235	SM00448	cheY-homologous receiver domain
CR091_RS26240	SM00387	Histidine kinase-like ATPases
CR091_RS26270	SM00860	SMI1 / KNR4 family
CR091_RS26310	SM00849	Metallo-beta-lactamase superfamily
CR091_RS26485	SM00382	ATPases associated with a variety of cellular activities
CR091_RS26490	SM00220	Serine/Threonine protein kinases, catalytic domain
CR091_RS26490	SM01260	CR091_RS26490
CR091_RS26520	SM00448	cheY-homologous receiver domain
CR091_RS26520	SM00850	LytTr DNA-binding domain
CR091_RS26560	SM00347	helix_turn_helix multiple antibiotic resistance protein
CR091_RS26585	SM00966	SpoVT / AbrB like domain 
CR091_RS26620	SM00825	Beta-ketoacyl synthase
CR091_RS26625	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS26645	SM01091	Transporter associated domain
CR091_RS26665	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CR091_RS26700	SM00530	Helix-turn-helix XRE-family like proteins 
CR091_RS26840	SM00857	Resolvase, N terminal domain
CR091_RS26845	SM00914	CR091_RS26845
CR091_RS26890	SM00421	helix_turn_helix, Lux Regulon
CR091_RS26915	SM00422	helix_turn_helix, mercury resistance
CR091_RS26935	SM00112	Cadherin repeats.
