locus-tag class description RA13_RS00015 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RA13_RS00020 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS00030 PF07690 Major Facilitator Superfamily RA13_RS00035 PF05816 Toxic anion resistance protein (TelA) RA13_RS00040 PF14266 Putative component of 'biosynthetic module' RA13_RS00060 PF03741 Integral membrane protein TerC family RA13_RS00065 PF02342 TerD domain RA13_RS00070 PF02342 TerD domain RA13_RS00075 PF02342 TerD domain RA13_RS00080 PF00296 Luciferase-like monooxygenase RA13_RS00085 PF00950 ABC 3 transport family RA13_RS00090 PF00005 ABC transporter RA13_RS00095 PF01297 Zinc-uptake complex component A periplasmic RA13_RS00100 PF00128 Alpha amylase, catalytic domain RA13_RS00110 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS00115 PF13539 D-alanyl-D-alanine carboxypeptidase RA13_RS00120 PF16244 Domain of unknown function (DUF4901) RA13_RS00125 PF01475 Ferric uptake regulator family RA13_RS00135 PF17118 Domain of unknown function (DUF5105) RA13_RS00135 PF11611 Domain of unknown function (DUF4352) RA13_RS00140 PF00248 Aldo/keto reductase family RA13_RS00145 PF02810 SEC-C motif RA13_RS00145 PF05225 helix-turn-helix, Psq domain RA13_RS00150 PF01674 Lipase (class 2) RA13_RS00155 PF17763 Glutaminase/Asparaginase C-terminal domain RA13_RS00155 PF00710 Asparaginase, N-terminal RA13_RS00160 PF00440 Bacterial regulatory proteins, tetR family RA13_RS00165 PF07690 Major Facilitator Superfamily RA13_RS00170 PF00266 Aminotransferase class-V RA13_RS00175 PF01470 Pyroglutamyl peptidase RA13_RS00180 PF00902 Sec-independent protein translocase protein (TatC) RA13_RS00185 PF02416 mttA/Hcf106 family RA13_RS00190 PF16655 PhoD-like phosphatase, N-terminal domain RA13_RS00190 PF09423 PhoD-like phosphatase RA13_RS00195 PF07486 Cell Wall Hydrolase RA13_RS00205 PF10710 Protein of unknown function (DUF2512) RA13_RS00220 PF00005 ABC transporter RA13_RS00225 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS00225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS00230 PF00072 Response regulator receiver domain RA13_RS00230 PF00486 Transcriptional regulatory protein, C terminal RA13_RS00235 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein RA13_RS00250 PF08666 SAF domain RA13_RS00250 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RA13_RS00255 PF00392 Bacterial regulatory proteins, gntR family RA13_RS00255 PF07729 FCD domain RA13_RS00260 PF13378 Enolase C-terminal domain-like RA13_RS00265 PF07690 Major Facilitator Superfamily RA13_RS00270 PF00171 Aldehyde dehydrogenase family RA13_RS00275 PF00701 Dihydrodipicolinate synthetase family RA13_RS00280 PF00072 Response regulator receiver domain RA13_RS00280 PF08664 YcbB domain RA13_RS00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS00290 PF04960 Glutaminase RA13_RS00295 PF01235 Sodium:alanine symporter family RA13_RS00300 PF02574 Homocysteine S-methyltransferase RA13_RS00310 PF01063 Amino-transferase class IV RA13_RS00315 PF07853 Protein of unknown function (DUF1648) RA13_RS00320 PF00392 Bacterial regulatory proteins, gntR family RA13_RS00320 PF07702 UTRA domain RA13_RS00325 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RA13_RS00330 PF00367 phosphotransferase system, EIIB RA13_RS00330 PF02378 Phosphotransferase system, EIIC RA13_RS00330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RA13_RS00330 PF00367 phosphotransferase system, EIIB RA13_RS00330 PF02378 Phosphotransferase system, EIIC RA13_RS00330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RA13_RS00335 PF00375 Sodium:dicarboxylate symporter family RA13_RS00340 PF12368 Rhodanase C-terminal RA13_RS00340 PF17773 UPF0176 acylphosphatase like domain RA13_RS00340 PF00581 Rhodanese-like domain RA13_RS00345 PF12833 Helix-turn-helix domain RA13_RS00355 PF17936 Bacterial Ig domain RA13_RS00355 PF00082 Subtilase family RA13_RS00370 PF02666 Phosphatidylserine decarboxylase RA13_RS00375 PF09335 SNARE associated Golgi protein RA13_RS00380 PF01066 CDP-alcohol phosphatidyltransferase RA13_RS00390 PF13145 PPIC-type PPIASE domain RA13_RS00395 PF02222 ATP-grasp domain RA13_RS00400 PF00465 Iron-containing alcohol dehydrogenase RA13_RS00405 PF00892 EamA-like transporter family RA13_RS00410 PF08924 Domain of unknown function (DUF1906) RA13_RS00410 PF01471 Putative peptidoglycan binding domain RA13_RS00435 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RA13_RS00440 PF00535 Glycosyl transferase family 2 RA13_RS00445 PF00535 Glycosyl transferase family 2 RA13_RS00445 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RA13_RS00450 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RA13_RS00450 PF00535 Glycosyl transferase family 2 RA13_RS00455 PF10852 Protein of unknown function (DUF2651) RA13_RS00460 PF07690 Major Facilitator Superfamily RA13_RS00465 PF03009 Glycerophosphoryl diester phosphodiesterase family RA13_RS00470 PF02690 Na+/Pi-cotransporter RA13_RS00480 PF00067 Cytochrome P450 RA13_RS00485 PF00905 Penicillin binding protein transpeptidase domain RA13_RS00490 PF17340 Family of unknown function (DUF5370) RA13_RS00495 PF17334 Minor curli fiber component A RA13_RS00500 PF00324 Amino acid permease RA13_RS00505 PF01047 MarR family RA13_RS00510 PF03788 LrgA family RA13_RS00515 PF04172 LrgB-like family RA13_RS00520 PF00248 Aldo/keto reductase family RA13_RS00525 PF00672 HAMP domain RA13_RS00525 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS00530 PF00072 Response regulator receiver domain RA13_RS00530 PF00486 Transcriptional regulatory protein, C terminal RA13_RS00535 PF00561 alpha/beta hydrolase fold RA13_RS00540 PF00701 Dihydrodipicolinate synthetase family RA13_RS00545 PF04299 Putative FMN-binding domain RA13_RS00550 PF00155 Aminotransferase class I and II RA13_RS00550 PF00392 Bacterial regulatory proteins, gntR family RA13_RS00560 PF00282 Pyridoxal-dependent decarboxylase conserved domain RA13_RS00575 PF00376 MerR family regulatory protein RA13_RS00575 PF09278 MerR, DNA binding RA13_RS00620 PF10057 Uncharacterized conserved protein (DUF2294) RA13_RS00645 PF01380 SIS domain RA13_RS00650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RA13_RS00650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RA13_RS00650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RA13_RS00650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RA13_RS00655 PF07949 YbbR-like protein RA13_RS00660 PF02457 DisA bacterial checkpoint controller nucleotide-binding RA13_RS00665 PF13490 Putative zinc-finger RA13_RS00670 PF08281 Sigma-70, region 4 RA13_RS00670 PF04542 Sigma-70 region 2 RA13_RS00700 PF04463 Protein of unknown function (DUF523) RA13_RS00710 PF01380 SIS domain RA13_RS00715 PF01418 Helix-turn-helix domain, rpiR family RA13_RS00715 PF01380 SIS domain RA13_RS00720 PF00367 phosphotransferase system, EIIB RA13_RS00720 PF02378 Phosphotransferase system, EIIC RA13_RS00725 PF00144 Beta-lactamase RA13_RS00730 PF01915 Glycosyl hydrolase family 3 C-terminal domain RA13_RS00730 PF00933 Glycosyl hydrolase family 3 N terminal domain RA13_RS00735 PF07075 Protein of unknown function (DUF1343) RA13_RS00740 PF01497 Periplasmic binding protein RA13_RS00740 PF12833 Helix-turn-helix domain RA13_RS00745 PF01497 Periplasmic binding protein RA13_RS00750 PF01032 FecCD transport family RA13_RS00755 PF01032 FecCD transport family RA13_RS00760 PF00756 Putative esterase RA13_RS00765 PF01758 Sodium Bile acid symporter family RA13_RS00770 PF01740 STAS domain RA13_RS00770 PF00916 Sulfate permease family RA13_RS00775 PF08240 Alcohol dehydrogenase GroES-like domain RA13_RS00775 PF00107 Zinc-binding dehydrogenase RA13_RS00785 PF00202 Aminotransferase class-III RA13_RS00790 PF07690 Major Facilitator Superfamily RA13_RS00820 PF01522 Polysaccharide deacetylase RA13_RS00825 PF14089 KinB-signalling pathway activation in sporulation RA13_RS00830 PF17898 Spore germination GerD central core domain RA13_RS00835 PF10609 NUBPL iron-transfer P-loop NTPase RA13_RS00840 PF01520 N-acetylmuramoyl-L-alanine amidase RA13_RS00845 PF10730 Protein of unknown function (DUF2521) RA13_RS00860 PF08241 Methyltransferase domain RA13_RS00870 PF00380 Ribosomal protein S9/S16 RA13_RS00875 PF00572 Ribosomal protein L13 RA13_RS00880 PF01416 tRNA pseudouridine synthase RA13_RS00885 PF02361 Cobalt transport protein RA13_RS00890 PF00005 ABC transporter RA13_RS00895 PF00005 ABC transporter RA13_RS00900 PF01196 Ribosomal protein L17 RA13_RS00905 PF01000 RNA polymerase Rpb3/RpoA insert domain RA13_RS00905 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RA13_RS00905 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RA13_RS00910 PF00411 Ribosomal protein S11 RA13_RS00915 PF00416 Ribosomal protein S13/S18 RA13_RS00920 PF00444 Ribosomal protein L36 RA13_RS00925 PF01176 Translation initiation factor 1A / IF-1 RA13_RS00935 PF00557 Metallopeptidase family M24 RA13_RS00940 PF05191 Adenylate kinase, active site lid RA13_RS00945 PF00344 SecY translocase RA13_RS00955 PF00327 Ribosomal protein L30p/L7e RA13_RS00960 PF00333 Ribosomal protein S5, N-terminal domain RA13_RS00960 PF03719 Ribosomal protein S5, C-terminal domain RA13_RS00965 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RA13_RS00970 PF00347 Ribosomal protein L6 RA13_RS00975 PF00410 Ribosomal protein S8 RA13_RS00980 PF00253 Ribosomal protein S14p/S29e RA13_RS00985 PF00673 ribosomal L5P family C-terminus RA13_RS00985 PF00281 Ribosomal protein L5 RA13_RS00990 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RA13_RS00990 PF00467 KOW motif RA13_RS00995 PF00238 Ribosomal protein L14p/L23e RA13_RS01000 PF00366 Ribosomal protein S17 RA13_RS01005 PF00831 Ribosomal L29 protein RA13_RS01010 PF00252 Ribosomal protein L16p/L10e RA13_RS01015 PF00189 Ribosomal protein S3, C-terminal domain RA13_RS01015 PF07650 KH domain RA13_RS01020 PF00237 Ribosomal protein L22p/L17e RA13_RS01025 PF00203 Ribosomal protein S19 RA13_RS01030 PF00181 Ribosomal Proteins L2, RNA binding domain RA13_RS01030 PF03947 Ribosomal Proteins L2, C-terminal domain RA13_RS01035 PF00276 Ribosomal protein L23 RA13_RS01040 PF00573 Ribosomal protein L4/L1 family RA13_RS01045 PF00297 Ribosomal protein L3 RA13_RS01050 PF00338 Ribosomal protein S10p/S20e RA13_RS01055 PF12146 Serine aminopeptidase, S33 RA13_RS01060 PF03143 Elongation factor Tu C-terminal domain RA13_RS01060 PF03144 Elongation factor Tu domain 2 RA13_RS01060 PF00009 Elongation factor Tu GTP binding domain RA13_RS01065 PF03144 Elongation factor Tu domain 2 RA13_RS01065 PF03764 Elongation factor G, domain IV RA13_RS01065 PF00009 Elongation factor Tu GTP binding domain RA13_RS01065 PF00679 Elongation factor G C-terminus RA13_RS01065 PF14492 Elongation Factor G, domain II RA13_RS01070 PF00177 Ribosomal protein S7p/S5e RA13_RS01080 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RA13_RS01085 PF00623 RNA polymerase Rpb1, domain 2 RA13_RS01085 PF04998 RNA polymerase Rpb1, domain 5 RA13_RS01085 PF05000 RNA polymerase Rpb1, domain 4 RA13_RS01085 PF04983 RNA polymerase Rpb1, domain 3 RA13_RS01085 PF04997 RNA polymerase Rpb1, domain 1 RA13_RS01090 PF04563 RNA polymerase beta subunit RA13_RS01090 PF04561 RNA polymerase Rpb2, domain 2 RA13_RS01090 PF04565 RNA polymerase Rpb2, domain 3 RA13_RS01090 PF10385 RNA polymerase beta subunit external 1 domain RA13_RS01090 PF00562 RNA polymerase Rpb2, domain 6 RA13_RS01090 PF04560 RNA polymerase Rpb2, domain 7 RA13_RS01095 PF05175 Methyltransferase small domain RA13_RS01100 PF16320 Ribosomal protein L7/L12 dimerisation domain RA13_RS01100 PF00542 Ribosomal protein L7/L12 C-terminal domain RA13_RS01105 PF00466 Ribosomal protein L10 RA13_RS01110 PF00687 Ribosomal protein L1p/L10e family RA13_RS01115 PF00298 Ribosomal protein L11, RNA binding domain RA13_RS01115 PF03946 Ribosomal protein L11, N-terminal domain RA13_RS01120 PF00467 KOW motif RA13_RS01120 PF02357 Transcription termination factor nusG RA13_RS01125 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RA13_RS01130 PF00471 Ribosomal protein L33 RA13_RS01135 PF08281 Sigma-70, region 4 RA13_RS01135 PF04542 Sigma-70 region 2 RA13_RS01140 PF05991 YacP-like NYN domain RA13_RS01145 PF08032 RNA 2'-O ribose methyltransferase substrate binding RA13_RS01145 PF00588 SpoU rRNA Methylase family RA13_RS01150 PF00636 Ribonuclease III domain RA13_RS01155 PF01406 tRNA synthetases class I (C) catalytic domain RA13_RS01155 PF09190 DALR domain RA13_RS01165 PF00749 tRNA synthetases class I (E and Q), catalytic domain RA13_RS01170 PF02542 YgbB family RA13_RS01175 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RA13_RS01185 PF02457 DisA bacterial checkpoint controller nucleotide-binding RA13_RS01185 PF10635 DisA bacterial checkpoint controller linker region RA13_RS01190 PF18073 Rubredoxin metal binding domain RA13_RS01195 PF07724 AAA domain (Cdc48 subfamily) RA13_RS01195 PF17871 AAA lid domain RA13_RS01195 PF02861 Clp amino terminal domain, pathogenicity island component RA13_RS01195 PF10431 C-terminal, D2-small domain, of ClpB protein RA13_RS01195 PF00004 ATPase family associated with various cellular activities (AAA) RA13_RS01200 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain RA13_RS01205 PF02151 UvrB/uvrC motif RA13_RS01210 PF17727 CtsR C-terminal dimerization domain RA13_RS01210 PF05848 CtsR N-terminal HTH domain RA13_RS01290 PF00152 tRNA synthetases class II (D, K and N) RA13_RS01290 PF01336 OB-fold nucleic acid binding domain RA13_RS01295 PF01207 Dihydrouridine synthase (Dus) RA13_RS01300 PF01381 Helix-turn-helix RA13_RS01305 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RA13_RS01310 PF02152 Dihydroneopterin aldolase RA13_RS01315 PF00809 Pterin binding enzyme RA13_RS01320 PF01063 Amino-transferase class IV RA13_RS01325 PF00117 Glutamine amidotransferase class-I RA13_RS01330 PF04715 Anthranilate synthase component I, N terminal region RA13_RS01330 PF00425 chorismate binding enzyme RA13_RS01335 PF00291 Pyridoxal-phosphate dependent enzyme RA13_RS01340 PF13145 PPIC-type PPIASE domain RA13_RS01345 PF01430 Hsp33 protein RA13_RS01350 PF03309 Type III pantothenate kinase RA13_RS01355 PF01434 Peptidase family M41 RA13_RS01355 PF00004 ATPase family associated with various cellular activities (AAA) RA13_RS01355 PF17862 AAA+ lid domain RA13_RS01355 PF06480 FtsH Extracellular RA13_RS01360 PF00156 Phosphoribosyl transferase domain RA13_RS01365 PF09179 TilS substrate binding domain RA13_RS01365 PF01171 PP-loop family RA13_RS01365 PF11734 TilS substrate C-terminal domain RA13_RS01370 PF00069 Protein kinase domain RA13_RS01375 PF00092 von Willebrand factor type A domain RA13_RS01380 PF07228 Stage II sporulation protein E (SpoIIE) RA13_RS01395 PF00575 S1 RNA binding domain RA13_RS01400 PF04977 Septum formation initiator RA13_RS01405 PF09578 Spore cortex protein YabQ (Spore_YabQ) RA13_RS01410 PF07873 YabP family RA13_RS01415 PF01479 S4 domain RA13_RS01420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RA13_RS01420 PF03819 MazG nucleotide pyrophosphohydrolase domain RA13_RS01425 PF01943 Polysaccharide biosynthesis protein RA13_RS01425 PF14667 Polysaccharide biosynthesis C-terminal domain RA13_RS01430 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RA13_RS01430 PF15714 Stage V sporulation protein T C-terminal, transcription factor RA13_RS01435 PF00270 DEAD/DEAH box helicase RA13_RS01435 PF03461 TRCF domain RA13_RS01435 PF00271 Helicase conserved C-terminal domain RA13_RS01435 PF02559 CarD-like/TRCF domain RA13_RS01435 PF17757 UvrB interaction domain RA13_RS01440 PF10955 Protein of unknown function (DUF2757) RA13_RS01450 PF01386 Ribosomal L25p family RA13_RS01450 PF14693 Ribosomal protein TL5, C-terminal domain RA13_RS01455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RA13_RS01455 PF14572 Phosphoribosyl synthetase-associated domain RA13_RS01460 PF00132 Bacterial transferase hexapeptide (six repeats) RA13_RS01460 PF00483 Nucleotidyl transferase RA13_RS01465 PF04026 SpoVG RA13_RS01470 PF01042 Endoribonuclease L-PSP RA13_RS01475 PF00156 Phosphoribosyl transferase domain RA13_RS01475 PF09182 Bacterial purine repressor, N-terminal RA13_RS01480 PF08544 GHMP kinases C terminal RA13_RS01480 PF00288 GHMP kinases N terminal domain RA13_RS01485 PF00269 Small, acid-soluble spore proteins, alpha/beta type RA13_RS01490 PF06257 Biofilm formation stimulator VEG RA13_RS01495 PF05582 YabG peptidase U57 RA13_RS01500 PF00398 Ribosomal RNA adenine dimethylase RA13_RS01505 PF13662 Toprim domain RA13_RS01505 PF13331 Domain of unknown function (DUF4093) RA13_RS01510 PF03990 G5-linked-Ubiquitin-like domain RA13_RS01510 PF06725 3D domain RA13_RS01510 PF07501 G5 domain RA13_RS01520 PF01588 Putative tRNA binding domain RA13_RS01520 PF09334 tRNA synthetases class I (M) RA13_RS01520 PF08264 Anticodon-binding domain of tRNA RA13_RS01525 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RA13_RS01525 PF18277 AbrB C-terminal domain RA13_RS01530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RA13_RS01535 PF01541 GIY-YIG catalytic domain RA13_RS01540 PF05175 Methyltransferase small domain RA13_RS01545 PF06156 Initiation control protein YabA RA13_RS01550 PF04468 PSP1 C-terminal conserved region RA13_RS01555 PF09115 DNA polymerase III, delta subunit, C terminal RA13_RS01560 PF03885 Protein of unknown function (DUF327) RA13_RS01565 PF06153 Cyclic-di-AMP receptor RA13_RS01570 PF02223 Thymidylate kinase RA13_RS01580 PF05816 Toxic anion resistance protein (TelA) RA13_RS01585 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein RA13_RS01590 PF10764 Inhibitor of sigma-G Gin RA13_RS01620 PF07441 SigmaK-factor processing regulatory protein BofA RA13_RS01625 PF10704 Protein of unknown function (DUF2508) RA13_RS01630 PF13662 Toprim domain RA13_RS01630 PF02132 RecR protein RA13_RS01635 PF02575 YbaB/EbfC DNA-binding family RA13_RS01640 PF12169 DNA polymerase III subunits gamma and tau domain III RA13_RS01650 PF14437 MafB19-like deaminase RA13_RS01655 PF00857 Isochorismatase family RA13_RS01660 PF01476 LysM domain RA13_RS01660 PF00704 Glycosyl hydrolases family 18 RA13_RS01665 PF01712 Deoxynucleoside kinase RA13_RS01670 PF01712 Deoxynucleoside kinase RA13_RS01680 PF02403 Seryl-tRNA synthetase N-terminal domain RA13_RS01680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RA13_RS01685 PF01174 SNO glutamine amidotransferase family RA13_RS01690 PF01680 SOR/SNZ family RA13_RS01695 PF00768 D-alanyl-D-alanine carboxypeptidase RA13_RS01695 PF07943 Penicillin-binding protein 5, C-terminal domain RA13_RS01700 PF00478 IMP dehydrogenase / GMP reductase domain RA13_RS01700 PF00571 CBS domain RA13_RS01705 PF14175 YaaC-like Protein RA13_RS01765 PF00521 DNA gyrase/topoisomerase IV, subunit A RA13_RS01765 PF03989 DNA gyrase C-terminal domain, beta-propeller RA13_RS01770 PF01751 Toprim domain RA13_RS01770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS01770 PF00986 DNA gyrase B subunit, carboxyl terminus RA13_RS01770 PF00204 DNA gyrase B RA13_RS01775 PF04025 Domain of unknown function (DUF370) RA13_RS01780 PF02463 RecF/RecN/SMC N terminal domain RA13_RS01790 PF02768 DNA polymerase III beta subunit, C-terminal domain RA13_RS01790 PF00712 DNA polymerase III beta subunit, N-terminal domain RA13_RS01790 PF02767 DNA polymerase III beta subunit, central domain RA13_RS01795 PF11638 DnaA N-terminal domain RA13_RS01795 PF08299 Bacterial dnaA protein helix-turn-helix RA13_RS01795 PF00308 Bacterial dnaA protein RA13_RS01800 PF00468 Ribosomal protein L34 RA13_RS01805 PF00825 Ribonuclease P RA13_RS01810 PF02096 60Kd inner membrane protein RA13_RS01815 PF14804 Jag N-terminus RA13_RS01815 PF01424 R3H domain RA13_RS01820 PF01926 50S ribosome-binding GTPase RA13_RS01820 PF12631 MnmE helical domain RA13_RS01820 PF10396 GTP-binding protein TrmE N-terminus RA13_RS01825 PF13932 GidA associated domain RA13_RS01825 PF01134 Glucose inhibited division protein A RA13_RS01835 PF17762 HTH domain found in ParB protein RA13_RS01835 PF02195 ParB-like nuclease domain RA13_RS01840 PF06713 Bacterial PH domain RA13_RS01845 PF13614 AAA domain RA13_RS01850 PF17762 HTH domain found in ParB protein RA13_RS01850 PF02195 ParB-like nuclease domain RA13_RS01855 PF06866 Protein of unknown function (DUF1256) RA13_RS01865 PF06107 Bacterial protein of unknown function (DUF951) RA13_RS01870 PF01568 Molydopterin dinucleotide binding domain RA13_RS01870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RA13_RS01870 PF00384 Molybdopterin oxidoreductase RA13_RS01875 PF01926 50S ribosome-binding GTPase RA13_RS01875 PF06071 Protein of unknown function (DUF933) RA13_RS01880 PF01250 Ribosomal protein S6 RA13_RS01885 PF00436 Single-strand binding protein family RA13_RS01890 PF01084 Ribosomal protein S18 RA13_RS01900 PF07729 FCD domain RA13_RS01900 PF00392 Bacterial regulatory proteins, gntR family RA13_RS01905 PF00892 EamA-like transporter family RA13_RS01910 PF03372 Endonuclease/Exonuclease/phosphatase family RA13_RS01915 PF12833 Helix-turn-helix domain RA13_RS01915 PF02805 Metal binding domain of Ada RA13_RS01925 PF00356 Bacterial regulatory proteins, lacI family RA13_RS01925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RA13_RS01930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RA13_RS01940 PF03190 Protein of unknown function, DUF255 RA13_RS01950 PF06114 IrrE N-terminal-like domain RA13_RS01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS01965 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS01970 PF00486 Transcriptional regulatory protein, C terminal RA13_RS01970 PF00072 Response regulator receiver domain RA13_RS01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS01985 PF07730 Histidine kinase RA13_RS01990 PF00196 Bacterial regulatory proteins, luxR family RA13_RS01990 PF00072 Response regulator receiver domain RA13_RS01995 PF03176 MMPL family RA13_RS02005 PF06445 GyrI-like small molecule binding domain RA13_RS02005 PF13411 MerR HTH family regulatory protein RA13_RS02010 PF07729 FCD domain RA13_RS02010 PF00392 Bacterial regulatory proteins, gntR family RA13_RS02015 PF00180 Isocitrate/isopropylmalate dehydrogenase RA13_RS02025 PF13302 Acetyltransferase (GNAT) domain RA13_RS02030 PF07690 Major Facilitator Superfamily RA13_RS02040 PF01368 DHH family RA13_RS02040 PF02833 DHHA2 domain RA13_RS02045 PF01638 HxlR-like helix-turn-helix RA13_RS02050 PF07875 Coat F domain RA13_RS02060 PF09991 Predicted membrane protein (DUF2232) RA13_RS02065 PF01368 DHH family RA13_RS02065 PF02272 DHHA1 domain RA13_RS02070 PF01281 Ribosomal protein L9, N-terminal domain RA13_RS02070 PF03948 Ribosomal protein L9, C-terminal domain RA13_RS02075 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RA13_RS02080 PF07690 Major Facilitator Superfamily RA13_RS02085 PF14174 YycC-like protein RA13_RS02095 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) RA13_RS02100 PF00772 DnaB-like helicase N terminal domain RA13_RS02100 PF03796 DnaB-like helicase C terminal domain RA13_RS02105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RA13_RS02135 PF00486 Transcriptional regulatory protein, C terminal RA13_RS02135 PF00072 Response regulator receiver domain RA13_RS02140 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS02140 PF00672 HAMP domain RA13_RS02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS02140 PF13426 PAS domain RA13_RS02145 PF07435 YycH protein RA13_RS02150 PF09648 YycH protein RA13_RS02155 PF00753 Metallo-beta-lactamase superfamily RA13_RS02160 PF13180 PDZ domain RA13_RS02180 PF16326 ABC transporter C-terminal domain RA13_RS02180 PF00005 ABC transporter RA13_RS02180 PF12848 ABC transporter RA13_RS02190 PF00158 Sigma-54 interaction domain RA13_RS02190 PF13426 PAS domain RA13_RS02190 PF02954 Bacterial regulatory protein, Fis family RA13_RS02195 PF01022 Bacterial regulatory protein, arsR family RA13_RS02200 PF07853 Protein of unknown function (DUF1648) RA13_RS02200 PF13630 SdpI/YhfL protein family RA13_RS02205 PF00202 Aminotransferase class-III RA13_RS02210 PF00324 Amino acid permease RA13_RS02215 PF00491 Arginase family RA13_RS02220 PF00583 Acetyltransferase (GNAT) family RA13_RS02235 PF00107 Zinc-binding dehydrogenase RA13_RS02235 PF08240 Alcohol dehydrogenase GroES-like domain RA13_RS02240 PF14116 YyzF-like protein RA13_RS02245 PF02590 Predicted SPOUT methyltransferase RA13_RS02250 PF00145 C-5 cytosine-specific DNA methylase RA13_RS02275 PF04002 RadC-like JAB domain RA13_RS02320 PF02796 Helix-turn-helix domain of resolvase RA13_RS02320 PF00239 Resolvase, N terminal domain RA13_RS02340 PF04239 Protein of unknown function (DUF421) RA13_RS02345 PF00654 Voltage gated chloride channel RA13_RS02350 PF06874 Firmicute fructose-1,6-bisphosphatase RA13_RS02355 PF00005 ABC transporter RA13_RS02375 PF00324 Amino acid permease RA13_RS02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase RA13_RS02385 PF13192 Thioredoxin domain RA13_RS02390 PF00578 AhpC/TSA family RA13_RS02405 PF02447 GntP family permease RA13_RS02410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RA13_RS02410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RA13_RS02415 PF07729 FCD domain RA13_RS02415 PF00392 Bacterial regulatory proteins, gntR family RA13_RS02420 PF13556 PucR C-terminal helix-turn-helix domain RA13_RS02420 PF05651 Putative sugar diacid recognition RA13_RS02420 PF17853 GGDEF-like domain RA13_RS02425 PF02447 GntP family permease RA13_RS02430 PF02595 Glycerate kinase family RA13_RS02435 PF04230 Polysaccharide pyruvyl transferase RA13_RS02475 PF00440 Bacterial regulatory proteins, tetR family RA13_RS02480 PF07883 Cupin domain RA13_RS02485 PF04235 Protein of unknown function (DUF418) RA13_RS02490 PF06271 RDD family RA13_RS02495 PF17369 Family of unknown function (DUF5391) RA13_RS02500 PF00171 Aldehyde dehydrogenase family RA13_RS02505 PF00440 Bacterial regulatory proteins, tetR family RA13_RS02515 PF00183 Hsp90 protein RA13_RS02520 PF00083 Sugar (and other) transporter RA13_RS02540 PF00248 Aldo/keto reductase family RA13_RS02545 PF08220 DeoR-like helix-turn-helix domain RA13_RS02545 PF00455 DeoR C terminal sensor domain RA13_RS02550 PF00171 Aldehyde dehydrogenase family RA13_RS02555 PF04962 KduI/IolB family RA13_RS02560 PF00294 pfkB family carbohydrate kinase RA13_RS02565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RA13_RS02565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RA13_RS02565 PF00205 Thiamine pyrophosphate enzyme, central domain RA13_RS02570 PF01261 Xylose isomerase-like TIM barrel RA13_RS02575 PF07690 Major Facilitator Superfamily RA13_RS02580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RA13_RS02580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RA13_RS02585 PF01261 Xylose isomerase-like TIM barrel RA13_RS02590 PF01261 Xylose isomerase-like TIM barrel RA13_RS02595 PF01116 Fructose-bisphosphate aldolase class-II RA13_RS02600 PF01497 Periplasmic binding protein RA13_RS02610 PF00072 Response regulator receiver domain RA13_RS02610 PF00486 Transcriptional regulatory protein, C terminal RA13_RS02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS02620 PF00005 ABC transporter RA13_RS02625 PF02687 FtsX-like permease family RA13_RS02630 PF06486 Protein of unknown function (DUF1093) RA13_RS02645 PF11631 Protein of unknown function (DUF3255) RA13_RS02660 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family RA13_RS02670 PF04346 Ethanolamine utilisation protein, EutH RA13_RS02675 PF06724 Domain of Unknown Function (DUF1206) RA13_RS02680 PF04198 Putative sugar-binding domain RA13_RS02685 PF01791 DeoC/LacD family aldolase RA13_RS02690 PF01773 Na+ dependent nucleoside transporter N-terminus RA13_RS02690 PF07662 Na+ dependent nucleoside transporter C-terminus RA13_RS02695 PF00591 Glycosyl transferase family, a/b domain RA13_RS02695 PF02885 Glycosyl transferase family, helical bundle domain RA13_RS02695 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RA13_RS02705 PF00491 Arginase family RA13_RS02710 PF01979 Amidohydrolase family RA13_RS02715 PF17391 Urocanase N-terminal domain RA13_RS02715 PF01175 Urocanase Rossmann-like domain RA13_RS02715 PF17392 Urocanase C-terminal domain RA13_RS02720 PF00221 Aromatic amino acid lyase RA13_RS02725 PF09021 HutP RA13_RS02740 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS02780 PF16369 C-terminal lipocalin-like domain RA13_RS02780 PF04616 Glycosyl hydrolases family 43 RA13_RS02790 PF07478 D-ala D-ala ligase C-terminus RA13_RS02790 PF01820 D-ala D-ala ligase N-terminus RA13_RS02805 PF00155 Aminotransferase class I and II RA13_RS02810 PF02378 Phosphotransferase system, EIIC RA13_RS02810 PF00367 phosphotransferase system, EIIB RA13_RS02810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RA13_RS02815 PF00232 Glycosyl hydrolase family 1 RA13_RS02820 PF00582 Universal stress protein family RA13_RS02840 PF10014 2OG-Fe dioxygenase RA13_RS02850 PF00892 EamA-like transporter family RA13_RS02870 PF05593 RHS Repeat RA13_RS02910 PF14176 YxiJ-like protein RA13_RS02930 PF13472 GDSL-like Lipase/Acylhydrolase family RA13_RS02935 PF00805 Pentapeptide repeats (8 copies) RA13_RS02945 PF03880 DbpA RNA binding domain RA13_RS02945 PF00270 DEAD/DEAH box helicase RA13_RS02945 PF00271 Helicase conserved C-terminal domain RA13_RS02950 PF11700 Vacuole effluxer Atg22 like RA13_RS02960 PF00874 PRD domain RA13_RS02960 PF03123 CAT RNA binding domain RA13_RS02970 PF03600 Citrate transporter RA13_RS02975 PF06628 Catalase-related immune-responsive RA13_RS02975 PF18011 C-terminal domain found in long catalases RA13_RS02975 PF00199 Catalase RA13_RS02990 PF07662 Na+ dependent nucleoside transporter C-terminus RA13_RS02990 PF01773 Na+ dependent nucleoside transporter N-terminus RA13_RS02995 PF08241 Methyltransferase domain RA13_RS03005 PF01144 Coenzyme A transferase RA13_RS03010 PF01144 Coenzyme A transferase RA13_RS03020 PF00158 Sigma-54 interaction domain RA13_RS03020 PF00989 PAS fold RA13_RS03020 PF02954 Bacterial regulatory protein, Fis family RA13_RS03025 PF01717 Cobalamin-independent synthase, Catalytic domain RA13_RS03030 PF04525 LURP-one-related RA13_RS03045 PF01546 Peptidase family M20/M25/M40 RA13_RS03045 PF07687 Peptidase dimerisation domain RA13_RS03055 PF16363 GDP-mannose 4,6 dehydratase RA13_RS03060 PF11611 Domain of unknown function (DUF4352) RA13_RS03065 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RA13_RS03065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RA13_RS03070 PF13556 PucR C-terminal helix-turn-helix domain RA13_RS03075 PF17912 MalK OB fold domain RA13_RS03075 PF00005 ABC transporter RA13_RS03075 PF03459 TOBE domain RA13_RS03080 PF01522 Polysaccharide deacetylase RA13_RS03090 PF03390 2-hydroxycarboxylate transporter family RA13_RS03095 PF01654 Cytochrome bd terminal oxidase subunit I RA13_RS03100 PF02322 Cytochrome bd terminal oxidase subunit II RA13_RS03105 PF00664 ABC transporter transmembrane region RA13_RS03105 PF00005 ABC transporter RA13_RS03110 PF00005 ABC transporter RA13_RS03110 PF00664 ABC transporter transmembrane region RA13_RS03115 PF01256 Carbohydrate kinase RA13_RS03120 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RA13_RS03125 PF04542 Sigma-70 region 2 RA13_RS03125 PF08281 Sigma-70, region 4 RA13_RS03130 PF17280 Family of unknown function (DUF5345) RA13_RS03140 PF13396 Phospholipase_D-nuclease N-terminal RA13_RS03145 PF00005 ABC transporter RA13_RS03145 PF13732 Domain of unknown function (DUF4162) RA13_RS03150 PF12679 ABC-2 family transporter protein RA13_RS03155 PF07690 Major Facilitator Superfamily RA13_RS03160 PF00199 Catalase RA13_RS03160 PF06628 Catalase-related immune-responsive RA13_RS03165 PF02245 Methylpurine-DNA glycosylase (MPG) RA13_RS03175 PF00874 PRD domain RA13_RS03175 PF05043 Mga helix-turn-helix domain RA13_RS03175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RA13_RS03175 PF08279 HTH domain RA13_RS03180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RA13_RS03185 PF02378 Phosphotransferase system, EIIC RA13_RS03190 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RA13_RS03195 PF11975 Family 4 glycosyl hydrolase C-terminal domain RA13_RS03195 PF02056 Family 4 glycosyl hydrolase RA13_RS03200 PF01063 Amino-transferase class IV RA13_RS03205 PF04914 DltD protein RA13_RS03210 PF00550 Phosphopantetheine attachment site RA13_RS03215 PF03062 MBOAT, membrane-bound O-acyltransferase family RA13_RS03220 PF13193 AMP-binding enzyme C-terminal domain RA13_RS03220 PF00501 AMP-binding enzyme RA13_RS03225 PF12459 D-Ala-teichoic acid biosynthesis protein RA13_RS03230 PF02080 TrkA-C domain RA13_RS03230 PF02254 TrkA-N domain RA13_RS03240 PF04607 Region found in RelA / SpoT proteins RA13_RS03245 PF00579 tRNA synthetases class I (W and Y) RA13_RS03245 PF01479 S4 domain RA13_RS03250 PF01047 MarR family RA13_RS03255 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS03260 PF04389 Peptidase family M28 RA13_RS03260 PF02225 PA domain RA13_RS03265 PF09529 Integral membrane protein (intg_mem_TP0381) RA13_RS03270 PF01501 Glycosyl transferase family 8 RA13_RS03275 PF00874 PRD domain RA13_RS03275 PF03123 CAT RNA binding domain RA13_RS03280 PF00367 phosphotransferase system, EIIB RA13_RS03280 PF02378 Phosphotransferase system, EIIC RA13_RS03285 PF02378 Phosphotransferase system, EIIC RA13_RS03290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RA13_RS03295 PF17785 PUA-like domain RA13_RS03295 PF10672 S-adenosylmethionine-dependent methyltransferase RA13_RS03300 PF09962 Uncharacterized conserved protein (DUF2196) RA13_RS03330 PF00005 ABC transporter RA13_RS03335 PF04172 LrgB-like family RA13_RS03340 PF03788 LrgA family RA13_RS03345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS03345 PF03466 LysR substrate binding domain RA13_RS03350 PF02110 Hydroxyethylthiazole kinase family RA13_RS03355 PF02581 Thiamine monophosphate synthase RA13_RS03360 PF01323 DSBA-like thioredoxin domain RA13_RS03365 PF00474 Sodium:solute symporter family RA13_RS03370 PF04341 Protein of unknown function, DUF485 RA13_RS03385 PF08671 Anti-repressor SinI RA13_RS03390 PF00440 Bacterial regulatory proteins, tetR family RA13_RS03395 PF04138 GtrA-like protein RA13_RS03400 PF00288 GHMP kinases N terminal domain RA13_RS03400 PF08544 GHMP kinases C terminal RA13_RS03400 PF10509 Galactokinase galactose-binding signature RA13_RS03405 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain RA13_RS03405 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain RA13_RS03410 PF04226 Transglycosylase associated protein RA13_RS03415 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RA13_RS03415 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RA13_RS03420 PF00115 Cytochrome C and Quinol oxidase polypeptide I RA13_RS03425 PF00510 Cytochrome c oxidase subunit III RA13_RS03430 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RA13_RS03435 PF17368 Spore morphogenesis and germination YwcE RA13_RS03445 PF01098 Cell cycle protein RA13_RS03450 PF00881 Nitroreductase family RA13_RS03455 PF00296 Luciferase-like monooxygenase RA13_RS03470 PF03123 CAT RNA binding domain RA13_RS03470 PF00874 PRD domain RA13_RS03485 PF08244 Glycosyl hydrolases family 32 C terminal RA13_RS03485 PF00251 Glycosyl hydrolases family 32 N-terminal domain RA13_RS03500 PF08543 Phosphomethylpyrimidine kinase RA13_RS03505 PF03551 Transcriptional regulator PadR-like family RA13_RS03520 PF00535 Glycosyl transferase family 2 RA13_RS03525 PF03167 Uracil DNA glycosylase superfamily RA13_RS03530 PF00171 Aldehyde dehydrogenase family RA13_RS03535 PF17261 Family of unknown function (DUF5327) RA13_RS03540 PF00860 Permease family RA13_RS03545 PF04241 Protein of unknown function (DUF423) RA13_RS03550 PF09671 Spore coat protein (Spore_GerQ) RA13_RS03555 PF00535 Glycosyl transferase family 2 RA13_RS03560 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RA13_RS03565 PF00583 Acetyltransferase (GNAT) family RA13_RS03570 PF00483 Nucleotidyl transferase RA13_RS03575 PF16363 GDP-mannose 4,6 dehydratase RA13_RS03585 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RA13_RS03590 PF17735 Biofilm surface layer A RA13_RS03595 PF07690 Major Facilitator Superfamily RA13_RS03600 PF07690 Major Facilitator Superfamily RA13_RS03605 PF06778 Chlorite dismutase RA13_RS03610 PF01515 Phosphate acetyl/butaryl transferase RA13_RS03615 PF03601 Conserved hypothetical protein 698 RA13_RS03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS03620 PF03466 LysR substrate binding domain RA13_RS03625 PF03099 Biotin/lipoate A/B protein ligase family RA13_RS03630 PF00892 EamA-like transporter family RA13_RS03640 PF07293 Protein of unknown function (DUF1450) RA13_RS03645 PF01966 HD domain RA13_RS03655 PF13520 Amino acid permease RA13_RS03660 PF01047 MarR family RA13_RS03665 PF01361 Tautomerase enzyme RA13_RS03670 PF02163 Peptidase family M50 RA13_RS03675 PF08741 YwhD family RA13_RS03680 PF00912 Transglycosylase RA13_RS03680 PF00905 Penicillin binding protein transpeptidase domain RA13_RS03685 PF17284 Spermidine synthase tetramerisation domain RA13_RS03690 PF00491 Arginase family RA13_RS03700 PF00005 ABC transporter RA13_RS03725 PF11131 Rap-phr extracellular signalling RA13_RS03730 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS03735 PF07563 Protein of unknown function (DUF1541) RA13_RS03755 PF00675 Insulinase (Peptidase family M16) RA13_RS03760 PF00675 Insulinase (Peptidase family M16) RA13_RS03765 PF11420 Bacteriocin subtilosin A RA13_RS03770 PF09148 Domain of unknown function (DUF1934) RA13_RS03775 PF00750 tRNA synthetases class I (R) RA13_RS03775 PF03485 Arginyl tRNA synthetase N terminal domain RA13_RS03775 PF05746 DALR anticodon binding domain RA13_RS03785 PF00325 Bacterial regulatory proteins, crp family RA13_RS03785 PF00027 Cyclic nucleotide-binding domain RA13_RS03800 PF14710 Respiratory nitrate reductase alpha N-terminal RA13_RS03800 PF00384 Molybdopterin oxidoreductase RA13_RS03800 PF01568 Molydopterin dinucleotide binding domain RA13_RS03805 PF14711 Respiratory nitrate reductase beta C-terminal RA13_RS03805 PF13247 4Fe-4S dicluster domain RA13_RS03810 PF02613 Nitrate reductase delta subunit RA13_RS03815 PF02665 Nitrate reductase gamma subunit RA13_RS03820 PF13091 PLD-like domain RA13_RS03820 PF13396 Phospholipase_D-nuclease N-terminal RA13_RS03825 PF00005 ABC transporter RA13_RS03825 PF00664 ABC transporter transmembrane region RA13_RS03830 PF01872 RibD C-terminal domain RA13_RS03840 PF03851 UV-endonuclease UvdE RA13_RS03845 PF13091 PLD-like domain RA13_RS03850 PF02754 Cysteine-rich domain RA13_RS03850 PF13183 4Fe-4S dicluster domain RA13_RS03855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RA13_RS03855 PF02770 Acyl-CoA dehydrogenase, middle domain RA13_RS03855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RA13_RS03860 PF05066 HB1, ASXL, restriction endonuclease HTH domain RA13_RS03865 PF00117 Glutamine amidotransferase class-I RA13_RS03865 PF06418 CTP synthase N-terminus RA13_RS03870 PF10740 Domain of unknown function (DUF2529) RA13_RS03875 PF00072 Response regulator receiver domain RA13_RS03880 PF01116 Fructose-bisphosphate aldolase class-II RA13_RS03885 PF00923 Transaldolase/Fructose-6-phosphate aldolase RA13_RS03890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RA13_RS03895 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RA13_RS03900 PF07497 Rho termination factor, RNA-binding domain RA13_RS03900 PF07498 Rho termination factor, N-terminal domain RA13_RS03900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RA13_RS03905 PF01197 Ribosomal protein L31 RA13_RS03910 PF00265 Thymidine kinase RA13_RS03915 PF00390 Malic enzyme, N-terminal domain RA13_RS03915 PF03949 Malic enzyme, NAD binding domain RA13_RS03920 PF03547 Membrane transport protein RA13_RS03925 PF13411 MerR HTH family regulatory protein RA13_RS03930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RA13_RS03935 PF03462 PCRF domain RA13_RS03935 PF00472 RF-1 domain RA13_RS03940 PF17827 PrmC N-terminal domain RA13_RS03940 PF05175 Methyltransferase small domain RA13_RS03945 PF17247 Family of unknown function (DUF5316) RA13_RS03950 PF17094 Uncharacterised protein family (UPF0715) RA13_RS03955 PF09551 Stage II sporulation protein R (spore_II_R) RA13_RS03965 PF03481 Putative GTP-binding controlling metal-binding RA13_RS03965 PF01300 Telomere recombination RA13_RS03970 PF02659 Putative manganese efflux pump RA13_RS03975 PF01451 Low molecular weight phosphotyrosine protein phosphatase RA13_RS03980 PF02502 Ribose/Galactose Isomerase RA13_RS03985 PF04260 Protein of unknown function (DUF436) RA13_RS03990 PF00464 Serine hydroxymethyltransferase RA13_RS04000 PF03899 ATP synthase I chain RA13_RS04005 PF00119 ATP synthase A chain RA13_RS04010 PF00137 ATP synthase subunit C RA13_RS04015 PF00430 ATP synthase B/B' CF(0) RA13_RS04020 PF00213 ATP synthase delta (OSCP) subunit RA13_RS04025 PF00306 ATP synthase alpha/beta chain, C terminal domain RA13_RS04025 PF02874 ATP synthase alpha/beta family, beta-barrel domain RA13_RS04025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RA13_RS04030 PF00231 ATP synthase RA13_RS04035 PF02874 ATP synthase alpha/beta family, beta-barrel domain RA13_RS04035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RA13_RS04040 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RA13_RS04040 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RA13_RS04050 PF06612 Protein of unknown function (DUF1146) RA13_RS04055 PF08680 TATA-box binding RA13_RS04060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RA13_RS04065 PF08486 Stage II sporulation protein RA13_RS04075 PF00092 von Willebrand factor type A domain RA13_RS04080 PF00092 von Willebrand factor type A domain RA13_RS04085 PF02634 FdhD/NarQ family RA13_RS04090 PF06463 Molybdenum Cofactor Synthesis C RA13_RS04090 PF04055 Radical SAM superfamily RA13_RS04095 PF17874 MalT-like TPR region RA13_RS04095 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS04105 PF05532 CsbD-like RA13_RS04110 PF00547 Urease, gamma subunit RA13_RS04115 PF00699 Urease beta subunit RA13_RS04120 PF01979 Amidohydrolase family RA13_RS04120 PF00449 Urease alpha-subunit, N-terminal domain RA13_RS04125 PF02082 Transcriptional regulator RA13_RS04130 PF13460 NAD(P)H-binding RA13_RS04135 PF17319 Family of unknown function (DUF5362) RA13_RS04140 PF07739 TipAS antibiotic-recognition domain RA13_RS04140 PF13411 MerR HTH family regulatory protein RA13_RS04145 PF13396 Phospholipase_D-nuclease N-terminal RA13_RS04145 PF13091 PLD-like domain RA13_RS04150 PF17370 Family of unknown function (DUF5392) RA13_RS04155 PF08666 SAF domain RA13_RS04155 PF03102 NeuB family RA13_RS04170 PF02348 Cytidylyltransferase RA13_RS04175 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RA13_RS04180 PF16363 GDP-mannose 4,6 dehydratase RA13_RS04185 PF02719 Polysaccharide biosynthesis protein RA13_RS04190 PF17319 Family of unknown function (DUF5362) RA13_RS04195 PF00583 Acetyltransferase (GNAT) family RA13_RS04200 PF01551 Peptidase family M23 RA13_RS04205 PF04892 VanZ like family RA13_RS04210 PF01569 PAP2 superfamily RA13_RS04215 PF01098 Cell cycle protein RA13_RS04220 PF00543 Nitrogen regulatory protein P-II RA13_RS04225 PF00909 Ammonium Transporter Family RA13_RS04235 PF00857 Isochorismatase family RA13_RS04240 PF07690 Major Facilitator Superfamily RA13_RS04245 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RA13_RS04250 PF07690 Major Facilitator Superfamily RA13_RS04255 PF01047 MarR family RA13_RS04265 PF12116 Stage III sporulation protein D RA13_RS04275 PF00460 Flagella basal body rod protein RA13_RS04275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RA13_RS04280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RA13_RS04280 PF00460 Flagella basal body rod protein RA13_RS04285 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS04290 PF07977 FabA-like domain RA13_RS04295 PF01741 Large-conductance mechanosensitive channel, MscL RA13_RS04300 PF14183 YwpF-like protein RA13_RS04310 PF00436 Single-strand binding protein family RA13_RS04315 PF08220 DeoR-like helix-turn-helix domain RA13_RS04315 PF00455 DeoR C terminal sensor domain RA13_RS04325 PF00176 SNF2 family N-terminal domain RA13_RS04325 PF00271 Helicase conserved C-terminal domain RA13_RS04325 PF12419 SNF2 Helicase protein RA13_RS04330 PF04434 SWIM zinc finger RA13_RS04340 PF02706 Chain length determinant protein RA13_RS04340 PF13807 G-rich domain on putative tyrosine kinase RA13_RS04345 PF13614 AAA domain RA13_RS04360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RA13_RS04360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RA13_RS04360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RA13_RS04370 PF16888 Domain of unknown function (DUF5082) RA13_RS04380 PF04740 LXG domain of WXG superfamily RA13_RS04380 PF14431 YwqJ-like deaminase RA13_RS04380 PF14449 Pre-toxin TG RA13_RS04385 PF07661 MORN repeat variant RA13_RS04395 PF04493 Endonuclease V RA13_RS04415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS04415 PF03466 LysR substrate binding domain RA13_RS04420 PF03358 NADPH-dependent FMN reductase RA13_RS04430 PF02417 Chromate transporter RA13_RS04435 PF02417 Chromate transporter RA13_RS04440 PF01037 Lrp/AsnC ligand binding domain RA13_RS04440 PF13404 AsnC-type helix-turn-helix domain RA13_RS04450 PF13789 Domain of unknown function (DUF4181) RA13_RS04455 PF00834 Ribulose-phosphate 3 epimerase family RA13_RS04465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RA13_RS04470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RA13_RS04475 PF01613 Flavin reductase like domain RA13_RS04485 PF08757 CotH kinase protein RA13_RS04495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RA13_RS04495 PF00205 Thiamine pyrophosphate enzyme, central domain RA13_RS04495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RA13_RS04500 PF03306 Alpha-acetolactate decarboxylase RA13_RS04505 PF02525 Flavodoxin-like fold RA13_RS04510 PF13031 Protein of unknown function (DUF3892) RA13_RS04515 PF08239 Bacterial SH3 domain RA13_RS04520 PF13407 Periplasmic binding protein domain RA13_RS04525 PF02653 Branched-chain amino acid transport system / permease component RA13_RS04530 PF00005 ABC transporter RA13_RS04535 PF05025 RbsD / FucU transport protein family RA13_RS04540 PF00294 pfkB family carbohydrate kinase RA13_RS04545 PF00356 Bacterial regulatory proteins, lacI family RA13_RS04555 PF03845 Spore germination protein RA13_RS04560 PF03323 Bacillus/Clostridium GerA spore germination protein RA13_RS04565 PF08245 Mur ligase middle domain RA13_RS04570 PF14102 Capsule biosynthesis CapC RA13_RS04575 PF09587 Bacterial capsule synthesis protein PGA_cap RA13_RS04580 PF00877 NlpC/P60 family RA13_RS04590 PF03816 Cell envelope-related transcriptional attenuator domain RA13_RS04595 PF00083 Sugar (and other) transporter RA13_RS04605 PF05504 Spore germination B3/ GerAC like, C-terminal RA13_RS04610 PF03845 Spore germination protein RA13_RS04615 PF03323 Bacillus/Clostridium GerA spore germination protein RA13_RS04620 PF01238 Phosphomannose isomerase type I RA13_RS04625 PF05036 Sporulation related domain RA13_RS04625 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RA13_RS04625 PF08239 Bacterial SH3 domain RA13_RS04630 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RA13_RS04635 PF03808 Glycosyl transferase WecB/TagA/CpsF family RA13_RS04640 PF01467 Cytidylyltransferase-like RA13_RS04645 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 RA13_RS04645 PF00535 Glycosyl transferase family 2 RA13_RS04650 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RA13_RS04655 PF01061 ABC-2 type transporter RA13_RS04660 PF00005 ABC transporter RA13_RS04665 PF00483 Nucleotidyl transferase RA13_RS04670 PF02350 UDP-N-acetylglucosamine 2-epimerase RA13_RS04675 PF03816 Cell envelope-related transcriptional attenuator domain RA13_RS04685 PF04122 Putative cell wall binding repeat 2 RA13_RS04685 PF08486 Stage II sporulation protein RA13_RS04690 PF04122 Putative cell wall binding repeat 2 RA13_RS04690 PF01520 N-acetylmuramoyl-L-alanine amidase RA13_RS04700 PF02397 Bacterial sugar transferase RA13_RS04710 PF13439 Glycosyltransferase Family 4 RA13_RS04710 PF00534 Glycosyl transferases group 1 RA13_RS04715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RA13_RS04715 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RA13_RS04715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RA13_RS04720 PF04932 O-Antigen ligase RA13_RS04725 PF02706 Chain length determinant protein RA13_RS04730 PF00535 Glycosyl transferase family 2 RA13_RS04740 PF00953 Glycosyl transferase family 4 RA13_RS04745 PF03816 Cell envelope-related transcriptional attenuator domain RA13_RS04750 PF01205 Uncharacterized protein family UPF0029 RA13_RS04750 PF09186 Domain of unknown function (DUF1949) RA13_RS04755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS04755 PF07730 Histidine kinase RA13_RS04755 PF05384 Sensor protein DegS RA13_RS04760 PF00196 Bacterial regulatory proteins, luxR family RA13_RS04760 PF00072 Response regulator receiver domain RA13_RS04765 PF02645 Uncharacterised protein, DegV family COG1307 RA13_RS04770 PF00271 Helicase conserved C-terminal domain RA13_RS04770 PF04851 Type III restriction enzyme, res subunit RA13_RS04775 PF10719 Late competence development protein ComFB RA13_RS04790 PF04316 Anti-sigma-28 factor, FlgM RA13_RS04795 PF05130 FlgN protein RA13_RS04800 PF00460 Flagella basal body rod protein RA13_RS04800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RA13_RS04805 PF00700 Bacterial flagellin C-terminal helical region RA13_RS04805 PF00669 Bacterial flagellin N-terminal helical region RA13_RS04815 PF02623 FliW protein RA13_RS04820 PF02599 Global regulator protein family RA13_RS04825 PF00669 Bacterial flagellin N-terminal helical region RA13_RS04825 PF00700 Bacterial flagellin C-terminal helical region RA13_RS04830 PF03646 FlaG protein RA13_RS04835 PF07195 Flagellar hook-associated protein 2 C-terminus RA13_RS04835 PF02465 Flagellar hook-associated protein 2 N-terminus RA13_RS04835 PF07196 Flagellin hook IN motif RA13_RS04840 PF02561 Flagellar protein FliS RA13_RS04855 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RA13_RS04855 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RA13_RS04860 PF07516 SecA Wing and Scaffold domain RA13_RS04860 PF01043 SecA preprotein cross-linking domain RA13_RS04860 PF07517 SecA DEAD-like domain RA13_RS04860 PF02810 SEC-C motif RA13_RS04870 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RA13_RS04870 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RA13_RS04875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RA13_RS04880 PF00005 ABC transporter RA13_RS04885 PF18075 FtsX extracellular domain RA13_RS04885 PF02687 FtsX-like permease family RA13_RS04890 PF03572 Peptidase family S41 RA13_RS04890 PF17820 PDZ domain RA13_RS04890 PF01471 Putative peptidoglycan binding domain RA13_RS04895 PF17423 Swarming motility protein RA13_RS04900 PF17820 PDZ domain RA13_RS04910 PF07690 Major Facilitator Superfamily RA13_RS04915 PF00440 Bacterial regulatory proteins, tetR family RA13_RS04920 PF00391 PEP-utilising enzyme, mobile domain RA13_RS04920 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RA13_RS04925 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) RA13_RS04935 PF17755 UvrA DNA-binding domain RA13_RS04935 PF17760 UvrA interaction domain RA13_RS04935 PF00005 ABC transporter RA13_RS04950 PF13349 Putative adhesin RA13_RS04955 PF04024 PspC domain RA13_RS04960 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RA13_RS04965 PF00149 Calcineurin-like phosphoesterase RA13_RS04970 PF00392 Bacterial regulatory proteins, gntR family RA13_RS04970 PF07702 UTRA domain RA13_RS04975 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RA13_RS04980 PF01979 Amidohydrolase family RA13_RS04985 PF07475 HPr Serine kinase C-terminal domain RA13_RS04985 PF02603 HPr Serine kinase N terminus RA13_RS04990 PF01790 Prolipoprotein diacylglyceryl transferase RA13_RS04995 PF07670 Nucleoside recognition RA13_RS05000 PF13419 Haloacid dehalogenase-like hydrolase RA13_RS05005 PF14602 Hexapeptide repeat of succinyl-transferase RA13_RS05010 PF03211 Pectate lyase RA13_RS05015 PF13529 Peptidase_C39 like family RA13_RS05025 PF01634 ATP phosphoribosyltransferase RA13_RS05030 PF00815 Histidinol dehydrogenase RA13_RS05035 PF00475 Imidazoleglycerol-phosphate dehydratase RA13_RS05040 PF00117 Glutamine amidotransferase class-I RA13_RS05045 PF00977 Histidine biosynthesis protein RA13_RS05050 PF00977 Histidine biosynthesis protein RA13_RS05055 PF01502 Phosphoribosyl-AMP cyclohydrolase RA13_RS05055 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RA13_RS05060 PF00583 Acetyltransferase (GNAT) family RA13_RS05080 PF00877 NlpC/P60 family RA13_RS05085 PF07992 Pyridine nucleotide-disulphide oxidoreductase RA13_RS05090 PF00293 NUDIX domain RA13_RS05095 PF03668 P-loop ATPase protein family RA13_RS05100 PF01933 Uncharacterised protein family UPF0052 RA13_RS05105 PF10298 WhiA N-terminal LAGLIDADG-like domain RA13_RS05105 PF14527 WhiA LAGLIDADG-like domain RA13_RS05105 PF02650 WhiA C-terminal HTH domain RA13_RS05110 PF00381 PTS HPr component phosphorylation site RA13_RS05115 PF00797 N-acetyltransferase RA13_RS05120 PF00545 ribonuclease RA13_RS05125 PF00072 Response regulator receiver domain RA13_RS05125 PF00486 Transcriptional regulatory protein, C terminal RA13_RS05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS05135 PF00005 ABC transporter RA13_RS05140 PF02687 FtsX-like permease family RA13_RS05145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RA13_RS05145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RA13_RS05155 PF00916 Sulfate permease family RA13_RS05155 PF01740 STAS domain RA13_RS05160 PF03819 MazG nucleotide pyrophosphohydrolase domain RA13_RS05165 PF03641 Possible lysine decarboxylase RA13_RS05170 PF01965 DJ-1/PfpI family RA13_RS05175 PF00574 Clp protease RA13_RS05190 PF13302 Acetyltransferase (GNAT) domain RA13_RS05195 PF00893 Small Multidrug Resistance protein RA13_RS05200 PF00893 Small Multidrug Resistance protein RA13_RS05205 PF00440 Bacterial regulatory proteins, tetR family RA13_RS05205 PF17934 Tetracyclin repressor-like, C-terminal domain RA13_RS05220 PF02435 Levansucrase/Invertase RA13_RS05240 PF00005 ABC transporter RA13_RS05260 PF00135 Carboxylesterase family RA13_RS05265 PF01381 Helix-turn-helix RA13_RS05265 PF08671 Anti-repressor SinI RA13_RS05270 PF02706 Chain length determinant protein RA13_RS05275 PF13614 AAA domain RA13_RS05280 PF02719 Polysaccharide biosynthesis protein RA13_RS05285 PF13439 Glycosyltransferase Family 4 RA13_RS05285 PF00534 Glycosyl transferases group 1 RA13_RS05290 PF00535 Glycosyl transferase family 2 RA13_RS05295 PF13439 Glycosyltransferase Family 4 RA13_RS05295 PF00534 Glycosyl transferases group 1 RA13_RS05305 PF00535 Glycosyl transferase family 2 RA13_RS05310 PF04230 Polysaccharide pyruvyl transferase RA13_RS05315 PF00535 Glycosyl transferase family 2 RA13_RS05320 PF01943 Polysaccharide biosynthesis protein RA13_RS05320 PF14667 Polysaccharide biosynthesis C-terminal domain RA13_RS05325 PF02397 Bacterial sugar transferase RA13_RS05330 PF00132 Bacterial transferase hexapeptide (six repeats) RA13_RS05330 PF17836 PglD N-terminal domain RA13_RS05335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RA13_RS05340 PF04230 Polysaccharide pyruvyl transferase RA13_RS05345 PF09628 YvfG protein RA13_RS05350 PF04552 Sigma-54, DNA binding domain RA13_RS05350 PF04963 Sigma-54 factor, core binding domain RA13_RS05350 PF00309 Sigma-54 factor, Activator interacting domain (AID) RA13_RS05355 PF02652 L-lactate permease RA13_RS05360 PF07729 FCD domain RA13_RS05360 PF00392 Bacterial regulatory proteins, gntR family RA13_RS05365 PF13426 PAS domain RA13_RS05365 PF07228 Stage II sporulation protein E (SpoIIE) RA13_RS05370 PF02754 Cysteine-rich domain RA13_RS05375 PF11870 Domain of unknown function (DUF3390) RA13_RS05375 PF13183 4Fe-4S dicluster domain RA13_RS05375 PF02589 LUD domain RA13_RS05380 PF02589 LUD domain RA13_RS05390 PF00324 Amino acid permease RA13_RS05395 PF00892 EamA-like transporter family RA13_RS05400 PF03466 LysR substrate binding domain RA13_RS05400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS05405 PF00296 Luciferase-like monooxygenase RA13_RS05410 PF00392 Bacterial regulatory proteins, gntR family RA13_RS05415 PF00083 Sugar (and other) transporter RA13_RS05420 PF04198 Putative sugar-binding domain RA13_RS05425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RA13_RS05425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RA13_RS05430 PF00162 Phosphoglycerate kinase RA13_RS05435 PF00121 Triosephosphate isomerase RA13_RS05440 PF01676 Metalloenzyme superfamily RA13_RS05440 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RA13_RS05445 PF03952 Enolase, N-terminal domain RA13_RS05445 PF00113 Enolase, C-terminal TIM barrel domain RA13_RS05450 PF02225 PA domain RA13_RS05450 PF04389 Peptidase family M28 RA13_RS05455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RA13_RS05455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RA13_RS05455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RA13_RS05460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RA13_RS05465 PF01370 NAD dependent epimerase/dehydratase family RA13_RS05470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RA13_RS05485 PF02585 GlcNAc-PI de-N-acetylase RA13_RS05500 PF00583 Acetyltransferase (GNAT) family RA13_RS05505 PF13240 zinc-ribbon domain RA13_RS05520 PF12802 MarR family RA13_RS05525 PF00005 ABC transporter RA13_RS05525 PF00571 CBS domain RA13_RS05530 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS05535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RA13_RS05540 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS05545 PF12802 MarR family RA13_RS05550 PF00571 CBS domain RA13_RS05550 PF00005 ABC transporter RA13_RS05560 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RA13_RS05565 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS05570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RA13_RS05570 PF12729 Four helix bundle sensory module for signal transduction RA13_RS05570 PF00672 HAMP domain RA13_RS05575 PF01638 HxlR-like helix-turn-helix RA13_RS05590 PF01381 Helix-turn-helix RA13_RS05595 PF03840 Preprotein translocase SecG subunit RA13_RS05600 PF12146 Serine aminopeptidase, S33 RA13_RS05605 PF08206 Ribonuclease B OB domain RA13_RS05605 PF00773 RNB domain RA13_RS05605 PF17876 Cold shock domain RA13_RS05605 PF00575 S1 RNA binding domain RA13_RS05610 PF01668 SmpB protein RA13_RS05620 PF02525 Flavodoxin-like fold RA13_RS05625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RA13_RS05625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RA13_RS05630 PF02583 Metal-sensitive transcriptional repressor RA13_RS05635 PF00403 Heavy-metal-associated domain RA13_RS05640 PF00403 Heavy-metal-associated domain RA13_RS05645 PF00403 Heavy-metal-associated domain RA13_RS05650 PF13462 Thioredoxin RA13_RS05655 PF02600 Disulfide bond formation protein DsbB RA13_RS05665 PF03458 UPF0126 domain RA13_RS05670 PF13538 UvrD-like helicase C-terminal domain RA13_RS05675 PF00175 Oxidoreductase NAD-binding domain RA13_RS05675 PF00667 FAD binding domain RA13_RS05675 PF00258 Flavodoxin RA13_RS05680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RA13_RS05680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RA13_RS05690 PF00999 Sodium/hydrogen exchanger family RA13_RS05700 PF00248 Aldo/keto reductase family RA13_RS05710 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS05720 PF12727 PBP superfamily domain RA13_RS05720 PF12728 Helix-turn-helix domain RA13_RS05725 PF00884 Sulfatase RA13_RS05730 PF04307 LexA-binding, inner membrane-associated putative hydrolase RA13_RS05740 PF09575 Small spore protein J (Spore_SspJ) RA13_RS05745 PF13520 Amino acid permease RA13_RS05755 PF01497 Periplasmic binding protein RA13_RS05760 PF01032 FecCD transport family RA13_RS05765 PF01032 FecCD transport family RA13_RS05770 PF00005 ABC transporter RA13_RS05775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RA13_RS05780 PF00005 ABC transporter RA13_RS05785 PF12704 MacB-like periplasmic core domain RA13_RS05785 PF02687 FtsX-like permease family RA13_RS05790 PF14184 Regulatory protein YrvL RA13_RS05795 PF00190 Cupin RA13_RS05800 PF12841 YvrJ protein family RA13_RS05805 PF04545 Sigma-70, region 4 RA13_RS05815 PF00072 Response regulator receiver domain RA13_RS05815 PF00486 Transcriptional regulatory protein, C terminal RA13_RS05820 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS05825 PF08450 SMP-30/Gluconolactonase/LRE-like region RA13_RS05830 PF00106 short chain dehydrogenase RA13_RS05835 PF01497 Periplasmic binding protein RA13_RS05840 PF01032 FecCD transport family RA13_RS05845 PF00005 ABC transporter RA13_RS05850 PF01923 Cobalamin adenosyltransferase RA13_RS05855 PF07690 Major Facilitator Superfamily RA13_RS05865 PF04012 PspA/IM30 family RA13_RS05870 PF13349 Putative adhesin RA13_RS05875 PF09922 Cell wall-active antibiotics response 4TMS YvqF RA13_RS05880 PF07730 Histidine kinase RA13_RS05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS05880 PF00672 HAMP domain RA13_RS05885 PF00072 Response regulator receiver domain RA13_RS05885 PF00196 Bacterial regulatory proteins, luxR family RA13_RS05890 PF05504 Spore germination B3/ GerAC like, C-terminal RA13_RS05905 PF13113 Protein of unknown function (DUF3970) RA13_RS05910 PF00206 Lyase RA13_RS05910 PF10415 Fumarase C C-terminus RA13_RS05915 PF00440 Bacterial regulatory proteins, tetR family RA13_RS05925 PF00672 HAMP domain RA13_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS05925 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS05930 PF00486 Transcriptional regulatory protein, C terminal RA13_RS05930 PF00072 Response regulator receiver domain RA13_RS05935 PF13180 PDZ domain RA13_RS05940 PF00210 Ferritin-like domain RA13_RS05945 PF00106 short chain dehydrogenase RA13_RS05955 PF14039 YusW-like protein RA13_RS05960 PF00005 ABC transporter RA13_RS05965 PF10835 Protein of unknown function (DUF2573) RA13_RS05970 PF07690 Major Facilitator Superfamily RA13_RS05975 PF01047 MarR family RA13_RS05980 PF07875 Coat F domain RA13_RS05990 PF01619 Proline dehydrogenase RA13_RS05995 PF14115 YuzL-like protein RA13_RS06000 PF00378 Enoyl-CoA hydratase/isomerase RA13_RS06000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RA13_RS06000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RA13_RS06005 PF02803 Thiolase, C-terminal domain RA13_RS06005 PF00108 Thiolase, N-terminal domain RA13_RS06010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RA13_RS06010 PF02770 Acyl-CoA dehydrogenase, middle domain RA13_RS06010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RA13_RS06015 PF03960 ArsC family RA13_RS06020 PF01597 Glycine cleavage H-protein RA13_RS06025 PF10830 Protein of unknown function (DUF2553) RA13_RS06030 PF01751 Toprim domain RA13_RS06035 PF00085 Thioredoxin RA13_RS06040 PF02036 SCP-2 sterol transfer family RA13_RS06045 PF00005 ABC transporter RA13_RS06045 PF09383 NIL domain RA13_RS06050 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS06055 PF03180 NLPA lipoprotein RA13_RS06060 PF02627 Carboxymuconolactone decarboxylase family RA13_RS06070 PF00005 ABC transporter RA13_RS06075 PF01458 Uncharacterized protein family (UPF0051) RA13_RS06080 PF00266 Aminotransferase class-V RA13_RS06085 PF01592 NifU-like N terminal domain RA13_RS06090 PF01458 Uncharacterized protein family (UPF0051) RA13_RS06095 PF01266 FAD dependent oxidoreductase RA13_RS06100 PF01541 GIY-YIG catalytic domain RA13_RS06105 PF01380 SIS domain RA13_RS06110 PF01547 Bacterial extracellular solute-binding protein RA13_RS06115 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS06120 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS06125 PF00294 pfkB family carbohydrate kinase RA13_RS06130 PF00392 Bacterial regulatory proteins, gntR family RA13_RS06130 PF07702 UTRA domain RA13_RS06135 PF00005 ABC transporter RA13_RS06135 PF17912 MalK OB fold domain RA13_RS06135 PF03459 TOBE domain RA13_RS06145 PF04231 Endonuclease I RA13_RS06150 PF02885 Glycosyl transferase family, helical bundle domain RA13_RS06150 PF00591 Glycosyl transferase family, a/b domain RA13_RS06155 PF01546 Peptidase family M20/M25/M40 RA13_RS06160 PF00266 Aminotransferase class-V RA13_RS06170 PF07690 Major Facilitator Superfamily RA13_RS06190 PF00005 ABC transporter RA13_RS06270 PF04542 Sigma-70 region 2 RA13_RS06270 PF08281 Sigma-70, region 4 RA13_RS06280 PF07905 Purine catabolism regulatory protein-like family RA13_RS06280 PF13556 PucR C-terminal helix-turn-helix domain RA13_RS06280 PF17853 GGDEF-like domain RA13_RS06285 PF01979 Amidohydrolase family RA13_RS06300 PF01904 Protein of unknown function DUF72 RA13_RS06305 PF01925 Sulfite exporter TauE/SafE RA13_RS06310 PF02872 5'-nucleotidase, C-terminal domain RA13_RS06315 PF08827 Domain of unknown function (DUF1805) RA13_RS06320 PF09560 Sporulation protein YunB (Spo_YunB) RA13_RS06325 PF01551 Peptidase family M23 RA13_RS06330 PF04055 Radical SAM superfamily RA13_RS06330 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RA13_RS06335 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) RA13_RS06340 PF06265 Protein of unknown function (DUF1027) RA13_RS06345 PF01934 Protein of unknown function DUF86 RA13_RS06350 PF13344 Haloacid dehalogenase-like hydrolase RA13_RS06355 PF04608 Phosphatidylglycerophosphatase A RA13_RS06370 PF03447 Homoserine dehydrogenase, NAD binding domain RA13_RS06370 PF00742 Homoserine dehydrogenase RA13_RS06370 PF01842 ACT domain RA13_RS06375 PF00291 Pyridoxal-phosphate dependent enzyme RA13_RS06380 PF00288 GHMP kinases N terminal domain RA13_RS06380 PF08544 GHMP kinases C terminal RA13_RS06385 PF00326 Prolyl oligopeptidase family RA13_RS06385 PF07676 WD40-like Beta Propeller Repeat RA13_RS06390 PF01106 NifU-like domain RA13_RS06395 PF07315 Protein of unknown function (DUF1462) RA13_RS06400 PF05870 Phenolic acid decarboxylase (PAD) RA13_RS06405 PF07992 Pyridine nucleotide-disulphide oxidoreductase RA13_RS06410 PF07293 Protein of unknown function (DUF1450) RA13_RS06415 PF07662 Na+ dependent nucleoside transporter C-terminus RA13_RS06415 PF01773 Na+ dependent nucleoside transporter N-terminus RA13_RS06420 PF01678 Diaminopimelate epimerase RA13_RS06425 PF01521 Iron-sulphur cluster biosynthesis RA13_RS06430 PF00478 IMP dehydrogenase / GMP reductase domain RA13_RS06440 PF07992 Pyridine nucleotide-disulphide oxidoreductase RA13_RS06445 PF07992 Pyridine nucleotide-disulphide oxidoreductase RA13_RS06450 PF14068 Putative membrane protein RA13_RS06455 PF06725 3D domain RA13_RS06460 PF02681 Divergent PAP2 family RA13_RS06465 PF02789 Cytosol aminopeptidase family, N-terminal domain RA13_RS06465 PF00883 Cytosol aminopeptidase family, catalytic domain RA13_RS06470 PF03553 Na+/H+ antiporter family RA13_RS06470 PF13726 Na+-H+ antiporter family RA13_RS06475 PF02632 BioY family RA13_RS06480 PF00174 Oxidoreductase molybdopterin binding domain RA13_RS06485 PF13783 Domain of unknown function (DUF4177) RA13_RS06495 PF00756 Putative esterase RA13_RS06500 PF00106 short chain dehydrogenase RA13_RS06505 PF00425 chorismate binding enzyme RA13_RS06515 PF00550 Phosphopantetheine attachment site RA13_RS06515 PF00857 Isochorismatase family RA13_RS06520 PF00668 Condensation domain RA13_RS06520 PF00550 Phosphopantetheine attachment site RA13_RS06520 PF00975 Thioesterase domain RA13_RS06520 PF13193 AMP-binding enzyme C-terminal domain RA13_RS06520 PF00501 AMP-binding enzyme RA13_RS06525 PF03621 MbtH-like protein RA13_RS06530 PF10042 Uncharacterized conserved protein (DUF2278) RA13_RS06535 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RA13_RS06535 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RA13_RS06540 PF06018 CodY GAF-like domain RA13_RS06540 PF13556 PucR C-terminal helix-turn-helix domain RA13_RS06540 PF17853 GGDEF-like domain RA13_RS06545 PF06013 Proteins of 100 residues with WXG RA13_RS06550 PF08817 WXG100 protein secretion system (Wss), protein YukD RA13_RS06555 PF10140 WXG100 protein secretion system (Wss), protein YukC RA13_RS06560 PF12538 DNA transporter RA13_RS06560 PF01580 FtsK/SpoIIIE family RA13_RS06570 PF17355 Family of unknown function (DUF5383) RA13_RS06575 PF00106 short chain dehydrogenase RA13_RS06580 PF01966 HD domain RA13_RS06585 PF10842 Protein of unknown function (DUF2642) RA13_RS06590 PF01594 AI-2E family transporter RA13_RS06595 PF10676 Spore germination protein gerPA/gerPF RA13_RS06600 PF14166 YueH-like protein RA13_RS06605 PF07997 Protein of unknown function (DUF1694) RA13_RS06610 PF00857 Isochorismatase family RA13_RS06615 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RA13_RS06615 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RA13_RS06615 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain RA13_RS06620 PF00563 EAL domain RA13_RS06620 PF08668 HDOD domain RA13_RS06630 PF08181 DegQ (SacQ) family RA13_RS06635 PF00348 Polyprenyl synthetase RA13_RS06645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS06645 PF07730 Histidine kinase RA13_RS06650 PF00196 Bacterial regulatory proteins, luxR family RA13_RS06650 PF00072 Response regulator receiver domain RA13_RS06655 PF03061 Thioesterase superfamily RA13_RS06660 PF03334 Na+/H+ antiporter subunit RA13_RS06665 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RA13_RS06670 PF01899 Na+/H+ ion antiporter subunit RA13_RS06675 PF00361 Proton-conducting membrane transporter RA13_RS06680 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RA13_RS06685 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RA13_RS06700 PF03390 2-hydroxycarboxylate transporter family RA13_RS06705 PF02653 Branched-chain amino acid transport system / permease component RA13_RS06710 PF02653 Branched-chain amino acid transport system / permease component RA13_RS06715 PF00005 ABC transporter RA13_RS06720 PF02608 ABC transporter substrate-binding protein PnrA-like RA13_RS06725 PF00072 Response regulator receiver domain RA13_RS06730 PF00989 PAS fold RA13_RS06730 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RA13_RS06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS06730 PF17203 Single cache domain 3 RA13_RS06735 PF17328 Family of unknown function (DUF5366) RA13_RS06740 PF04134 Protein of unknown function, DUF393 RA13_RS06745 PF00905 Penicillin binding protein transpeptidase domain RA13_RS06745 PF00912 Transglycosylase RA13_RS06750 PF07690 Major Facilitator Superfamily RA13_RS06760 PF00929 Exonuclease RA13_RS06765 PF08810 Kinase associated protein B RA13_RS06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS06770 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS06775 PF00155 Aminotransferase class I and II RA13_RS06780 PF08958 Domain of unknown function (DUF1871) RA13_RS06785 PF00561 alpha/beta hydrolase fold RA13_RS06785 PF08386 TAP-like protein RA13_RS06790 PF01037 Lrp/AsnC ligand binding domain RA13_RS06795 PF00155 Aminotransferase class I and II RA13_RS06800 PF00575 S1 RNA binding domain RA13_RS06805 PF04070 Domain of unknown function (DUF378) RA13_RS06810 PF00465 Iron-containing alcohol dehydrogenase RA13_RS06815 PF00465 Iron-containing alcohol dehydrogenase RA13_RS06825 PF00342 Phosphoglucose isomerase RA13_RS06835 PF08868 YugN-like family RA13_RS06840 PF07885 Ion channel RA13_RS06840 PF02254 TrkA-N domain RA13_RS06845 PF11458 Membrane-integrating protein Mistic RA13_RS06855 PF04298 Putative neutral zinc metallopeptidase RA13_RS06860 PF01595 Cyclin M transmembrane N-terminal domain RA13_RS06860 PF03471 Transporter associated domain RA13_RS06860 PF00571 CBS domain RA13_RS06870 PF01894 Uncharacterised protein family UPF0047 RA13_RS06875 PF03060 Nitronate monooxygenase RA13_RS06890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RA13_RS06890 PF00672 HAMP domain RA13_RS06890 PF02743 Cache domain RA13_RS06895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RA13_RS06895 PF02743 Cache domain RA13_RS06895 PF00672 HAMP domain RA13_RS06900 PF02743 Cache domain RA13_RS06900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RA13_RS06900 PF00672 HAMP domain RA13_RS06905 PF02743 Cache domain RA13_RS06905 PF00672 HAMP domain RA13_RS06905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RA13_RS06910 PF00596 Class II Aldolase and Adducin N-terminal domain RA13_RS06915 PF08220 DeoR-like helix-turn-helix domain RA13_RS06915 PF00455 DeoR C terminal sensor domain RA13_RS06920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RA13_RS06920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RA13_RS06925 PF05336 L-rhamnose mutarotase RA13_RS06930 PF06134 L-rhamnose isomerase (RhaA) RA13_RS06935 PF01965 DJ-1/PfpI family RA13_RS06940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RA13_RS06940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RA13_RS06945 PF01594 AI-2E family transporter RA13_RS06975 PF14470 Bacterial PH domain RA13_RS07005 PF12671 Putative amidase domain RA13_RS07030 PF07690 Major Facilitator Superfamily RA13_RS07035 PF13457 GW (Gly-Tryp) dipeptide domain RA13_RS07035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RA13_RS07045 PF02386 Cation transport protein RA13_RS07050 PF02254 TrkA-N domain RA13_RS07050 PF02080 TrkA-C domain RA13_RS07055 PF17735 Biofilm surface layer A RA13_RS07065 PF00171 Aldehyde dehydrogenase family RA13_RS07070 PF00465 Iron-containing alcohol dehydrogenase RA13_RS07080 PF12867 DinB superfamily RA13_RS07090 PF01145 SPFH domain / Band 7 family RA13_RS07090 PF15975 Flotillin RA13_RS07100 PF04203 Sortase domain RA13_RS07105 PF09515 Thiamine transporter protein (Thia_YuaJ) RA13_RS07230 PF00128 Alpha amylase, catalytic domain RA13_RS07230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RA13_RS07230 PF02806 Alpha amylase, C-terminal all-beta domain RA13_RS07235 PF00483 Nucleotidyl transferase RA13_RS07240 PF00483 Nucleotidyl transferase RA13_RS07245 PF00534 Glycosyl transferases group 1 RA13_RS07245 PF08323 Starch synthase catalytic domain RA13_RS07250 PF00343 Carbohydrate phosphorylase RA13_RS07255 PF03073 TspO/MBR family RA13_RS07260 PF01636 Phosphotransferase enzyme family RA13_RS07265 PF13439 Glycosyltransferase Family 4 RA13_RS07265 PF00534 Glycosyl transferases group 1 RA13_RS07280 PF13439 Glycosyltransferase Family 4 RA13_RS07280 PF00534 Glycosyl transferases group 1 RA13_RS07285 PF01370 NAD dependent epimerase/dehydratase family RA13_RS07295 PF01258 Prokaryotic dksA/traR C4-type zinc finger RA13_RS07300 PF00425 chorismate binding enzyme RA13_RS07305 PF16582 Middle domain of thiamine pyrophosphate RA13_RS07305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RA13_RS07305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RA13_RS07310 PF00561 alpha/beta hydrolase fold RA13_RS07315 PF00378 Enoyl-CoA hydratase/isomerase RA13_RS07320 PF13193 AMP-binding enzyme C-terminal domain RA13_RS07320 PF00501 AMP-binding enzyme RA13_RS07325 PF13378 Enolase C-terminal domain-like RA13_RS07325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RA13_RS07330 PF01297 Zinc-uptake complex component A periplasmic RA13_RS07335 PF00005 ABC transporter RA13_RS07340 PF00950 ABC 3 transport family RA13_RS07345 PF00950 ABC 3 transport family RA13_RS07350 PF03330 Lytic transglycolase RA13_RS07355 PF07561 Domain of Unknown Function (DUF1540) RA13_RS07360 PF02322 Cytochrome bd terminal oxidase subunit II RA13_RS07365 PF01654 Cytochrome bd terminal oxidase subunit I RA13_RS07370 PF01197 Ribosomal protein L31 RA13_RS07375 PF07683 Cobalamin synthesis protein cobW C-terminal domain RA13_RS07375 PF02492 CobW/HypB/UreG, nucleotide-binding domain RA13_RS07380 PF00484 Carbonic anhydrase RA13_RS07385 PF01809 Putative membrane protein insertion efficiency factor RA13_RS07390 PF02664 S-Ribosylhomocysteinase (LuxS) RA13_RS07395 PF13115 YtkA-like RA13_RS07405 PF00210 Ferritin-like domain RA13_RS07410 PF05105 Bacteriophage holin family RA13_RS07420 PF00293 NUDIX domain RA13_RS07425 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS07430 PF00005 ABC transporter RA13_RS07440 PF00326 Prolyl oligopeptidase family RA13_RS07445 PF10763 Protein of unknown function (DUF2584) RA13_RS07450 PF01293 Phosphoenolpyruvate carboxykinase RA13_RS07455 PF00438 S-adenosylmethionine synthetase, N-terminal domain RA13_RS07455 PF02772 S-adenosylmethionine synthetase, central domain RA13_RS07455 PF02773 S-adenosylmethionine synthetase, C-terminal domain RA13_RS07460 PF00733 Asparagine synthase RA13_RS07460 PF13537 Glutamine amidotransferase domain RA13_RS07465 PF00324 Amino acid permease RA13_RS07470 PF00132 Bacterial transferase hexapeptide (six repeats) RA13_RS07475 PF12146 Serine aminopeptidase, S33 RA13_RS07480 PF10776 Protein of unknown function (DUF2600) RA13_RS07485 PF06962 Putative rRNA methylase RA13_RS07495 PF10732 Protein of unknown function (DUF2524) RA13_RS07505 PF00392 Bacterial regulatory proteins, gntR family RA13_RS07510 PF00005 ABC transporter RA13_RS07520 PF00005 ABC transporter RA13_RS07525 PF12704 MacB-like periplasmic core domain RA13_RS07525 PF02687 FtsX-like permease family RA13_RS07530 PF00072 Response regulator receiver domain RA13_RS07530 PF00486 Transcriptional regulatory protein, C terminal RA13_RS07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS07540 PF00005 ABC transporter RA13_RS07545 PF02687 FtsX-like permease family RA13_RS07550 PF04791 LMBR1-like membrane protein RA13_RS07555 PF07690 Major Facilitator Superfamily RA13_RS07560 PF01740 STAS domain RA13_RS07560 PF13426 PAS domain RA13_RS07570 PF13603 Leucyl-tRNA synthetase, Domain 2 RA13_RS07570 PF09334 tRNA synthetases class I (M) RA13_RS07570 PF00133 tRNA synthetases class I (I, L, M and V) RA13_RS07570 PF08264 Anticodon-binding domain of tRNA RA13_RS07575 PF00581 Rhodanese-like domain RA13_RS07580 PF01547 Bacterial extracellular solute-binding protein RA13_RS07585 PF01738 Dienelactone hydrolase family RA13_RS07590 PF03744 6-carboxyhexanoate--CoA ligase RA13_RS07595 PF00202 Aminotransferase class-III RA13_RS07600 PF00155 Aminotransferase class I and II RA13_RS07610 PF04055 Radical SAM superfamily RA13_RS07610 PF06968 Biotin and Thiamin Synthesis associated domain RA13_RS07615 PF00067 Cytochrome P450 RA13_RS07620 PF01370 NAD dependent epimerase/dehydratase family RA13_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS07630 PF13416 Bacterial extracellular solute-binding protein RA13_RS07635 PF17853 GGDEF-like domain RA13_RS07635 PF12833 Helix-turn-helix domain RA13_RS07640 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS07645 PF07470 Glycosyl Hydrolase Family 88 RA13_RS07655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RA13_RS07655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RA13_RS07660 PF04854 Protein of unknown function, DUF624 RA13_RS07665 PF10957 Sporulation protein Cse60 RA13_RS07670 PF02028 BCCT, betaine/carnitine/choline family transporter RA13_RS07680 PF14667 Polysaccharide biosynthesis C-terminal domain RA13_RS07680 PF01943 Polysaccharide biosynthesis protein RA13_RS07685 PF01479 S4 domain RA13_RS07685 PF00849 RNA pseudouridylate synthase RA13_RS07690 PF08220 DeoR-like helix-turn-helix domain RA13_RS07695 PF00860 Permease family RA13_RS07700 PF01546 Peptidase family M20/M25/M40 RA13_RS07705 PF00291 Pyridoxal-phosphate dependent enzyme RA13_RS07720 PF00781 Diacylglycerol kinase catalytic domain RA13_RS07725 PF00128 Alpha amylase, catalytic domain RA13_RS07725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RA13_RS07725 PF17999 Pullulanase N1-terminal domain RA13_RS07730 PF01636 Phosphotransferase enzyme family RA13_RS07735 PF14165 YtzH-like protein RA13_RS07740 PF02390 Putative methyltransferase RA13_RS07745 PF00753 Metallo-beta-lactamase superfamily RA13_RS07750 PF03949 Malic enzyme, NAD binding domain RA13_RS07750 PF00390 Malic enzyme, N-terminal domain RA13_RS07755 PF03413 Peptidase propeptide and YPEB domain RA13_RS07765 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ RA13_RS07770 PF00085 Thioredoxin RA13_RS07775 PF07285 Protein of unknown function (DUF1444) RA13_RS07780 PF14794 Domain of unknown function (DUF4479) RA13_RS07780 PF01588 Putative tRNA binding domain RA13_RS07785 PF17854 FtsK alpha domain RA13_RS07785 PF01580 FtsK/SpoIIIE family RA13_RS07785 PF09397 Ftsk gamma domain RA13_RS07790 PF08245 Mur ligase middle domain RA13_RS07790 PF01225 Mur ligase family, catalytic domain RA13_RS07790 PF02875 Mur ligase family, glutamate ligase domain RA13_RS07795 PF06103 Bacterial protein of unknown function (DUF948) RA13_RS07800 PF12732 YtxH-like protein RA13_RS07805 PF11009 Protein of unknown function (DUF2847) RA13_RS07810 PF01817 Chorismate mutase type II RA13_RS07810 PF00793 DAHP synthetase I family RA13_RS07815 PF00356 Bacterial regulatory proteins, lacI family RA13_RS07820 PF01618 MotA/TolQ/ExbB proton channel family RA13_RS07825 PF00691 OmpA family RA13_RS07825 PF13677 Membrane MotB of proton-channel complex MotA/MotB RA13_RS07830 PF00850 Histone deacetylase domain RA13_RS07835 PF00571 CBS domain RA13_RS07840 PF00583 Acetyltransferase (GNAT) family RA13_RS07845 PF13193 AMP-binding enzyme C-terminal domain RA13_RS07845 PF00501 AMP-binding enzyme RA13_RS07850 PF01479 S4 domain RA13_RS07850 PF00579 tRNA synthetases class I (W and Y) RA13_RS07855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS07855 PF03466 LysR substrate binding domain RA13_RS07865 PF01738 Dienelactone hydrolase family RA13_RS07875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RA13_RS07880 PF07681 DoxX RA13_RS07890 PF01047 MarR family RA13_RS07900 PF00857 Isochorismatase family RA13_RS07920 PF01479 S4 domain RA13_RS07920 PF00163 Ribosomal protein S4/S9 N-terminal domain RA13_RS07925 PF00990 Diguanylate cyclase, GGDEF domain RA13_RS07930 PF13185 GAF domain RA13_RS07935 PF00440 Bacterial regulatory proteins, tetR family RA13_RS07940 PF02811 PHP domain RA13_RS07945 PF06160 Septation ring formation regulator, EzrA RA13_RS07950 PF05525 Branched-chain amino acid transport protein RA13_RS07955 PF00266 Aminotransferase class-V RA13_RS07960 PF02568 Thiamine biosynthesis protein (ThiI) RA13_RS07960 PF02926 THUMP domain RA13_RS07965 PF00269 Small, acid-soluble spore proteins, alpha/beta type RA13_RS07970 PF00501 AMP-binding enzyme RA13_RS07970 PF13193 AMP-binding enzyme C-terminal domain RA13_RS07975 PF07969 Amidohydrolase family RA13_RS07980 PF01513 ATP-NAD kinase RA13_RS07985 PF01343 Peptidase family S49 RA13_RS07990 PF06271 RDD family RA13_RS07995 PF11167 Protein of unknown function (DUF2953) RA13_RS08000 PF09579 Sporulation protein YtfJ (Spore_YtfJ) RA13_RS08005 PF08534 Redoxin RA13_RS08010 PF02384 N-6 DNA Methylase RA13_RS08015 PF00871 Acetokinase family RA13_RS08020 PF00994 Probable molybdopterin binding domain RA13_RS08025 PF00764 Arginosuccinate synthase RA13_RS08030 PF14698 Argininosuccinate lyase C-terminal RA13_RS08030 PF00206 Lyase RA13_RS08045 PF00392 Bacterial regulatory proteins, gntR family RA13_RS08045 PF03061 Thioesterase superfamily RA13_RS08045 PF07085 DRTGG domain RA13_RS08045 PF00571 CBS domain RA13_RS08050 PF14007 YtpI-like protein RA13_RS08055 PF01368 DHH family RA13_RS08055 PF02272 DHHA1 domain RA13_RS08070 PF14034 Sporulation protein YtrH RA13_RS08080 PF00390 Malic enzyme, N-terminal domain RA13_RS08080 PF03949 Malic enzyme, NAD binding domain RA13_RS08085 PF01039 Carboxyl transferase domain RA13_RS08085 PF17848 Acetyl-coA carboxylase zinc finger domain RA13_RS08090 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RA13_RS08095 PF00365 Phosphofructokinase RA13_RS08100 PF02887 Pyruvate kinase, alpha/beta domain RA13_RS08100 PF00391 PEP-utilising enzyme, mobile domain RA13_RS08100 PF00224 Pyruvate kinase, barrel domain RA13_RS08105 PF04186 FxsA cytoplasmic membrane protein RA13_RS08110 PF01594 AI-2E family transporter RA13_RS08115 PF04284 Protein of unknown function (DUF441) RA13_RS08120 PF00285 Citrate synthase, C-terminal domain RA13_RS08125 PF00180 Isocitrate/isopropylmalate dehydrogenase RA13_RS08130 PF00056 lactate/malate dehydrogenase, NAD binding domain RA13_RS08130 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RA13_RS08135 PF00486 Transcriptional regulatory protein, C terminal RA13_RS08135 PF00072 Response regulator receiver domain RA13_RS08140 PF16736 Single Cache-like RA13_RS08140 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS08140 PF00989 PAS fold RA13_RS08140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS08145 PF01367 5'-3' exonuclease, C-terminal SAM fold RA13_RS08145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RA13_RS08145 PF00476 DNA polymerase family A RA13_RS08150 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RA13_RS08150 PF06827 Zinc finger found in FPG and IleRS RA13_RS08150 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RA13_RS08155 PF02659 Putative manganese efflux pump RA13_RS08160 PF01121 Dephospho-CoA kinase RA13_RS08165 PF00248 Aldo/keto reductase family RA13_RS08170 PF07690 Major Facilitator Superfamily RA13_RS08175 PF01638 HxlR-like helix-turn-helix RA13_RS08180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RA13_RS08180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RA13_RS08185 PF02675 S-adenosylmethionine decarboxylase RA13_RS08190 PF03477 ATP cone domain RA13_RS08195 PF07261 Replication initiation and membrane attachment RA13_RS08200 PF07319 Primosomal protein DnaI N-terminus RA13_RS08200 PF01695 IstB-like ATP binding protein RA13_RS08205 PF09335 SNARE associated Golgi protein RA13_RS08210 PF08812 YtxC-like family RA13_RS08215 PF03129 Anticodon binding domain RA13_RS08215 PF02824 TGS domain RA13_RS08215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RA13_RS08215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RA13_RS08220 PF13419 Haloacid dehalogenase-like hydrolase RA13_RS08225 PF06580 Histidine kinase RA13_RS08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS08225 PF07694 5TMR of 5TMR-LYT RA13_RS08230 PF00072 Response regulator receiver domain RA13_RS08230 PF04397 LytTr DNA-binding domain RA13_RS08235 PF03788 LrgA family RA13_RS08240 PF04172 LrgB-like family RA13_RS08260 PF00707 Translation initiation factor IF-3, C-terminal domain RA13_RS08260 PF05198 Translation initiation factor IF-3, N-terminal domain RA13_RS08265 PF01632 Ribosomal protein L35 RA13_RS08270 PF00453 Ribosomal protein L20 RA13_RS08275 PF06961 Protein of unknown function (DUF1294) RA13_RS08285 PF05343 M42 glutamyl aminopeptidase RA13_RS08290 PF04616 Glycosyl hydrolases family 43 RA13_RS08300 PF01425 Amidase RA13_RS08310 PF00753 Metallo-beta-lactamase superfamily RA13_RS08315 PF02610 L-arabinose isomerase RA13_RS08315 PF11762 L-arabinose isomerase C-terminal domain RA13_RS08320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RA13_RS08320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RA13_RS08325 PF00596 Class II Aldolase and Adducin N-terminal domain RA13_RS08330 PF13344 Haloacid dehalogenase-like hydrolase RA13_RS08335 PF13685 Iron-containing alcohol dehydrogenase RA13_RS08340 PF01547 Bacterial extracellular solute-binding protein RA13_RS08345 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS08350 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS08355 PF06964 Alpha-L-arabinofuranosidase C-terminal domain RA13_RS08360 PF02554 Carbon starvation protein CstA RA13_RS08360 PF13722 5TM C-terminal transporter carbon starvation CstA RA13_RS08365 PF12681 Glyoxalase-like domain RA13_RS08370 PF13183 4Fe-4S dicluster domain RA13_RS08370 PF02754 Cysteine-rich domain RA13_RS08375 PF02913 FAD linked oxidases, C-terminal domain RA13_RS08375 PF01565 FAD binding domain RA13_RS08380 PF05651 Putative sugar diacid recognition RA13_RS08380 PF17853 GGDEF-like domain RA13_RS08380 PF13556 PucR C-terminal helix-turn-helix domain RA13_RS08385 PF14098 Small, acid-soluble spore protein I RA13_RS08390 PF00588 SpoU rRNA Methylase family RA13_RS08390 PF08032 RNA 2'-O ribose methyltransferase substrate binding RA13_RS08395 PF01409 tRNA synthetases class II core domain (F) RA13_RS08395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RA13_RS08400 PF03484 tRNA synthetase B5 domain RA13_RS08400 PF03147 Ferredoxin-fold anticodon binding domain RA13_RS08400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RA13_RS08400 PF01588 Putative tRNA binding domain RA13_RS08400 PF03483 B3/4 domain RA13_RS08410 PF05164 Cell division protein ZapA RA13_RS08415 PF02674 Colicin V production protein RA13_RS08420 PF14791 DNA polymerase beta thumb RA13_RS08420 PF02811 PHP domain RA13_RS08420 PF14716 Helix-hairpin-helix domain RA13_RS08425 PF01713 Smr domain RA13_RS08425 PF00488 MutS domain V RA13_RS08430 PF03994 Domain of Unknown Function (DUF350) RA13_RS08435 PF00501 AMP-binding enzyme RA13_RS08435 PF13193 AMP-binding enzyme C-terminal domain RA13_RS08440 PF08359 YsiA-like protein, C-terminal region RA13_RS08440 PF00440 Bacterial regulatory proteins, tetR family RA13_RS08445 PF00378 Enoyl-CoA hydratase/isomerase RA13_RS08450 PF01012 Electron transfer flavoprotein domain RA13_RS08455 PF01012 Electron transfer flavoprotein domain RA13_RS08455 PF00766 Electron transfer flavoprotein FAD-binding domain RA13_RS08460 PF06964 Alpha-L-arabinofuranosidase C-terminal domain RA13_RS08465 PF00085 Thioredoxin RA13_RS08470 PF01541 GIY-YIG catalytic domain RA13_RS08470 PF02151 UvrB/uvrC motif RA13_RS08470 PF08459 UvrC Helix-hairpin-helix N-terminal RA13_RS08475 PF00696 Amino acid kinase family RA13_RS08475 PF01842 ACT domain RA13_RS08475 PF13840 ACT domain RA13_RS08480 PF10702 Protein of unknown function (DUF2507) RA13_RS08485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RA13_RS08490 PF02910 Fumarate reductase flavoprotein C-term RA13_RS08490 PF00890 FAD binding domain RA13_RS08500 PF03061 Thioesterase superfamily RA13_RS08505 PF00196 Bacterial regulatory proteins, luxR family RA13_RS08510 PF01047 MarR family RA13_RS08515 PF01177 Asp/Glu/Hydantoin racemase RA13_RS08520 PF10646 Sporulation and spore germination RA13_RS08525 PF03725 3' exoribonuclease family, domain 2 RA13_RS08525 PF01138 3' exoribonuclease family, domain 1 RA13_RS08530 PF01725 Ham1 family RA13_RS08535 PF12850 Calcineurin-like phosphoesterase superfamily domain RA13_RS08545 PF11181 Heat induced stress protein YflT RA13_RS08545 PF09557 Domain of unknown function (DUF2382) RA13_RS08550 PF00583 Acetyltransferase (GNAT) family RA13_RS08555 PF00205 Thiamine pyrophosphate enzyme, central domain RA13_RS08555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RA13_RS08555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RA13_RS08560 PF01842 ACT domain RA13_RS08560 PF10369 Small subunit of acetolactate synthase RA13_RS08565 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RA13_RS08565 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RA13_RS08570 PF00682 HMGL-like RA13_RS08570 PF08502 LeuA allosteric (dimerisation) domain RA13_RS08575 PF00180 Isocitrate/isopropylmalate dehydrogenase RA13_RS08580 PF00330 Aconitase family (aconitate hydratase) RA13_RS08585 PF00694 Aconitase C-terminal domain RA13_RS08595 PF05697 Bacterial trigger factor protein (TF) RA13_RS08595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RA13_RS08595 PF05698 Bacterial trigger factor protein (TF) C-terminus RA13_RS08600 PF10431 C-terminal, D2-small domain, of ClpB protein RA13_RS08600 PF06689 ClpX C4-type zinc finger RA13_RS08600 PF07724 AAA domain (Cdc48 subfamily) RA13_RS08610 PF02190 ATP-dependent protease La (LON) substrate-binding domain RA13_RS08610 PF05362 Lon protease (S16) C-terminal proteolytic domain RA13_RS08610 PF00004 ATPase family associated with various cellular activities (AAA) RA13_RS08625 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RA13_RS08625 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RA13_RS08625 PF01488 Shikimate / quinate 5-dehydrogenase RA13_RS08630 PF01578 Cytochrome C assembly protein RA13_RS08635 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RA13_RS08635 PF03900 Porphobilinogen deaminase, C-terminal domain RA13_RS08640 PF02602 Uroporphyrinogen-III synthase HemD RA13_RS08645 PF00490 Delta-aminolevulinic acid dehydratase RA13_RS08650 PF00202 Aminotransferase class-III RA13_RS08655 PF01476 LysM domain RA13_RS08670 PF00133 tRNA synthetases class I (I, L, M and V) RA13_RS08670 PF08264 Anticodon-binding domain of tRNA RA13_RS08670 PF10458 Valyl tRNA synthetase tRNA binding arm RA13_RS08675 PF08245 Mur ligase middle domain RA13_RS08675 PF02875 Mur ligase family, glutamate ligase domain RA13_RS08680 PF06750 Bacterial Peptidase A24 N-terminal domain RA13_RS08680 PF01478 Type IV leader peptidase family RA13_RS08685 PF05036 Sporulation related domain RA13_RS08690 PF02545 Maf-like protein RA13_RS08695 PF04002 RadC-like JAB domain RA13_RS08695 PF00633 Helix-hairpin-helix motif RA13_RS08705 PF04085 rod shape-determining protein MreC RA13_RS08710 PF04093 rod shape-determining protein MreD RA13_RS08715 PF03775 Septum formation inhibitor MinC, C-terminal domain RA13_RS08720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RA13_RS08725 PF01551 Peptidase family M23 RA13_RS08730 PF02163 Peptidase family M50 RA13_RS08735 PF00829 Ribosomal prokaryotic L21 protein RA13_RS08740 PF04327 Cysteine protease Prp RA13_RS08745 PF01016 Ribosomal L27 protein RA13_RS08750 PF14682 Sporulation initiation phospho-transferase B, C-terminal RA13_RS08750 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RA13_RS08755 PF01018 GTP1/OBG RA13_RS08755 PF01926 50S ribosome-binding GTPase RA13_RS08755 PF09269 Domain of unknown function (DUF1967) RA13_RS08765 PF00800 Prephenate dehydratase RA13_RS08765 PF01842 ACT domain RA13_RS08770 PF02829 3H domain RA13_RS08770 PF08279 HTH domain RA13_RS08775 PF00266 Aminotransferase class-V RA13_RS08780 PF02910 Fumarate reductase flavoprotein C-term RA13_RS08780 PF00890 FAD binding domain RA13_RS08785 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RA13_RS08785 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RA13_RS08790 PF02445 Quinolinate synthetase A protein RA13_RS08795 PF01476 LysM domain RA13_RS08800 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) RA13_RS08810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RA13_RS08815 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RA13_RS08820 PF02378 Phosphotransferase system, EIIC RA13_RS08825 PF02056 Family 4 glycosyl hydrolase RA13_RS08825 PF11975 Family 4 glycosyl hydrolase C-terminal domain RA13_RS08830 PF00392 Bacterial regulatory proteins, gntR family RA13_RS08830 PF07702 UTRA domain RA13_RS08835 PF04794 YdjC-like protein RA13_RS08840 PF00041 Fibronectin type III domain RA13_RS08840 PF00704 Glycosyl hydrolases family 18 RA13_RS08845 PF00704 Glycosyl hydrolases family 18 RA13_RS08845 PF06483 Chitinase C RA13_RS08855 PF01709 Transcriptional regulator RA13_RS08875 PF07690 Major Facilitator Superfamily RA13_RS08880 PF08955 BofC C-terminal domain RA13_RS08880 PF08977 Bypass of Forespore C, N terminal RA13_RS08885 PF07499 RuvA, C-terminal domain RA13_RS08885 PF01330 RuvA N terminal domain RA13_RS08890 PF05491 RuvB C-terminal winged helix domain RA13_RS08890 PF17864 RuvB AAA lid domain RA13_RS08890 PF05496 Holliday junction DNA helicase RuvB P-loop domain RA13_RS08895 PF11146 Protein of unknown function (DUF2905) RA13_RS08900 PF02547 Queuosine biosynthesis protein RA13_RS08905 PF01702 Queuine tRNA-ribosyltransferase RA13_RS08910 PF02699 Preprotein translocase subunit RA13_RS08915 PF12670 Protein of unknown function (DUF3792) RA13_RS08920 PF04239 Protein of unknown function (DUF421) RA13_RS08925 PF01943 Polysaccharide biosynthesis protein RA13_RS08925 PF14667 Polysaccharide biosynthesis C-terminal domain RA13_RS08930 PF13797 Post-transcriptional regulator RA13_RS08935 PF07549 SecD/SecF GG Motif RA13_RS08935 PF02355 Protein export membrane protein RA13_RS08940 PF02080 TrkA-C domain RA13_RS08945 PF06305 Lipopolysaccharide assembly protein A domain RA13_RS08950 PF17768 RecJ OB domain RA13_RS08950 PF01368 DHH family RA13_RS08950 PF02272 DHHA1 domain RA13_RS08950 PF10141 Single-strand DNA-specific exonuclease, C terminal domain RA13_RS08955 PF00156 Phosphoribosyl transferase domain RA13_RS08965 PF02580 D-Tyr-tRNA(Tyr) deacylase RA13_RS08970 PF01520 N-acetylmuramoyl-L-alanine amidase RA13_RS08970 PF08239 Bacterial SH3 domain RA13_RS08975 PF13393 Histidyl-tRNA synthetase RA13_RS08975 PF03129 Anticodon binding domain RA13_RS08980 PF02938 GAD domain RA13_RS08980 PF00152 tRNA synthetases class II (D, K and N) RA13_RS08980 PF01336 OB-fold nucleic acid binding domain RA13_RS08990 PF00899 ThiF family RA13_RS08995 PF05496 Holliday junction DNA helicase RuvB P-loop domain RA13_RS08995 PF12002 MgsA AAA+ ATPase C terminal RA13_RS08995 PF16193 AAA C-terminal domain RA13_RS09000 PF02082 Transcriptional regulator RA13_RS09005 PF00266 Aminotransferase class-V RA13_RS09015 PF07719 Tetratricopeptide repeat RA13_RS09015 PF13181 Tetratricopeptide repeat RA13_RS09020 PF13538 UvrD-like helicase C-terminal domain RA13_RS09020 PF14490 Helix-hairpin-helix containing domain RA13_RS09020 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain RA13_RS09025 PF05239 PRC-barrel domain RA13_RS09035 PF13056 Protein of unknown function (DUF3918) RA13_RS09040 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS09050 PF00497 Bacterial extracellular solute-binding proteins, family 3 RA13_RS09055 PF00005 ABC transporter RA13_RS09060 PF01594 AI-2E family transporter RA13_RS09065 PF01411 tRNA synthetases class II (A) RA13_RS09065 PF02272 DHHA1 domain RA13_RS09065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RA13_RS09070 PF06135 IreB regulatory phosphoprotein RA13_RS09075 PF03652 Holliday junction resolvase RA13_RS09080 PF06949 Protein of unknown function (DUF1292) RA13_RS09085 PF02618 YceG-like family RA13_RS09090 PF01596 O-methyltransferase RA13_RS09095 PF01136 Peptidase family U32 RA13_RS09100 PF16325 Peptidase family U32 C-terminal domain RA13_RS09100 PF01136 Peptidase family U32 RA13_RS09105 PF00485 Phosphoribulokinase / Uridine kinase family RA13_RS09110 PF03449 Transcription elongation factor, N-terminal RA13_RS09110 PF01272 Transcription elongation factor, GreA/GreB, C-term RA13_RS09120 PF07423 Domain of unknown function (DUF1510) RA13_RS09125 PF10750 Protein of unknown function (DUF2536) RA13_RS09130 PF13649 Methyltransferase domain RA13_RS09135 PF01048 Phosphorylase superfamily RA13_RS09140 PF00291 Pyridoxal-phosphate dependent enzyme RA13_RS09145 PF01053 Cys/Met metabolism PLP-dependent enzyme RA13_RS09150 PF14143 YrhC-like protein RA13_RS09155 PF07849 Protein of unknown function (DUF1641) RA13_RS09160 PF00384 Molybdopterin oxidoreductase RA13_RS09160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RA13_RS09160 PF00037 4Fe-4S binding domain RA13_RS09160 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RA13_RS09160 PF01568 Molydopterin dinucleotide binding domain RA13_RS09165 PF10057 Uncharacterized conserved protein (DUF2294) RA13_RS09175 PF01226 Formate/nitrite transporter RA13_RS09180 PF09501 Probable sporulation protein (Bac_small_yrzI) RA13_RS09190 PF08241 Methyltransferase domain RA13_RS09195 PF16295 Tetracyclin repressor-like, C-terminal domain RA13_RS09195 PF00440 Bacterial regulatory proteins, tetR family RA13_RS09200 PF00667 FAD binding domain RA13_RS09200 PF00258 Flavodoxin RA13_RS09200 PF00067 Cytochrome P450 RA13_RS09200 PF00175 Oxidoreductase NAD-binding domain RA13_RS09205 PF11490 DNA polymerase III polC-type N-terminus II RA13_RS09205 PF07733 Bacterial DNA polymerase III alpha NTPase domain RA13_RS09205 PF14579 Helix-hairpin-helix motif RA13_RS09205 PF00929 Exonuclease RA13_RS09205 PF02811 PHP domain RA13_RS09205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RA13_RS09210 PF07690 Major Facilitator Superfamily RA13_RS09215 PF03466 LysR substrate binding domain RA13_RS09215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS09220 PF14145 YrhK-like protein RA13_RS09230 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment RA13_RS09235 PF04542 Sigma-70 region 2 RA13_RS09235 PF04545 Sigma-70, region 4 RA13_RS09245 PF08546 Ketopantoate reductase PanE/ApbA C terminal RA13_RS09245 PF02558 Ketopantoate reductase PanE/ApbA RA13_RS09250 PF06314 Acetoacetate decarboxylase (ADC) RA13_RS09255 PF03466 LysR substrate binding domain RA13_RS09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS09270 PF00392 Bacterial regulatory proteins, gntR family RA13_RS09275 PF00005 ABC transporter RA13_RS09295 PF01337 Barstar (barnase inhibitor) RA13_RS09300 PF00440 Bacterial regulatory proteins, tetR family RA13_RS09335 PF00881 Nitroreductase family RA13_RS09340 PF01638 HxlR-like helix-turn-helix RA13_RS09365 PF07508 Recombinase RA13_RS09365 PF00239 Resolvase, N terminal domain RA13_RS09365 PF13408 Recombinase zinc beta ribbon domain RA13_RS09405 PF04545 Sigma-70, region 4 RA13_RS09405 PF04542 Sigma-70 region 2 RA13_RS09410 PF09335 SNARE associated Golgi protein RA13_RS09415 PF01980 tRNA-methyltransferase O RA13_RS09420 PF01522 Polysaccharide deacetylase RA13_RS09425 PF00657 GDSL-like Lipase/Acylhydrolase RA13_RS09430 PF08970 Sporulation inhibitor A RA13_RS09440 PF01926 50S ribosome-binding GTPase RA13_RS09445 PF08501 Shikimate dehydrogenase substrate binding domain RA13_RS09445 PF01488 Shikimate / quinate 5-dehydrogenase RA13_RS09445 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RA13_RS09450 PF01985 CRS1 / YhbY (CRM) domain RA13_RS09455 PF01467 Cytidylyltransferase-like RA13_RS09460 PF01966 HD domain RA13_RS09470 PF13649 Methyltransferase domain RA13_RS09475 PF14748 Pyrroline-5-carboxylate reductase dimerisation RA13_RS09475 PF03807 NADP oxidoreductase coenzyme F420-dependent RA13_RS09480 PF10531 SLBB domain RA13_RS09485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RA13_RS09490 PF00753 Metallo-beta-lactamase superfamily RA13_RS09490 PF13567 Domain of unknown function (DUF4131) RA13_RS09490 PF03772 Competence protein RA13_RS09495 PF14141 YqzM-like protein RA13_RS09500 PF06144 DNA polymerase III, delta subunit RA13_RS09505 PF01649 Ribosomal protein S20 RA13_RS09510 PF03418 Germination protease RA13_RS09515 PF07454 Stage II sporulation protein P (SpoIIP) RA13_RS09520 PF12438 Protein of unknown function (DUF3679) RA13_RS09525 PF00679 Elongation factor G C-terminus RA13_RS09525 PF00009 Elongation factor Tu GTP binding domain RA13_RS09525 PF03144 Elongation factor Tu domain 2 RA13_RS09525 PF06421 GTP-binding protein LepA C-terminus RA13_RS09530 PF04055 Radical SAM superfamily RA13_RS09530 PF06969 HemN C-terminal domain RA13_RS09535 PF01628 HrcA protein C terminal domain RA13_RS09540 PF01025 GrpE RA13_RS09545 PF00012 Hsp70 protein RA13_RS09550 PF01556 DnaJ C terminal domain RA13_RS09550 PF00684 DnaJ central domain RA13_RS09550 PF00226 DnaJ domain RA13_RS09560 PF04452 RNA methyltransferase RA13_RS09565 PF04055 Radical SAM superfamily RA13_RS09565 PF01938 TRAM domain RA13_RS09565 PF00919 Uncharacterized protein family UPF0004 RA13_RS09570 PF02690 Na+/Pi-cotransporter RA13_RS09575 PF01165 Ribosomal protein S21 RA13_RS09580 PF09424 Yqey-like protein RA13_RS09590 PF12127 SigmaW regulon antibacterial RA13_RS09620 PF07873 YabP family RA13_RS09625 PF06898 Putative stage IV sporulation protein YqfD RA13_RS09630 PF02562 PhoH-like protein RA13_RS09635 PF07698 7TM receptor with intracellular HD hydrolase RA13_RS09635 PF01966 HD domain RA13_RS09635 PF07697 7TM-HD extracellular RA13_RS09640 PF02130 Uncharacterized protein family UPF0054 RA13_RS09645 PF01219 Prokaryotic diacylglycerol kinase RA13_RS09650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RA13_RS09655 PF01926 50S ribosome-binding GTPase RA13_RS09655 PF07650 KH domain RA13_RS09660 PF14006 YqzL-like protein RA13_RS09665 PF11967 Recombination protein O N terminal RA13_RS09665 PF02565 Recombination protein O C terminal RA13_RS09670 PF02091 Glycyl-tRNA synthetase alpha subunit RA13_RS09675 PF02092 Glycyl-tRNA synthetase beta subunit RA13_RS09680 PF08279 HTH domain RA13_RS09680 PF00571 CBS domain RA13_RS09685 PF03618 Kinase/pyrophosphorylase RA13_RS09690 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RA13_RS09695 PF10410 DnaB-helicase binding domain of primase RA13_RS09695 PF08275 DNA primase catalytic core, N-terminal domain RA13_RS09695 PF01807 CHC2 zinc finger RA13_RS09700 PF04545 Sigma-70, region 4 RA13_RS09700 PF04539 Sigma-70 region 3 RA13_RS09700 PF04542 Sigma-70 region 2 RA13_RS09700 PF00140 Sigma-70 factor, region 1.2 RA13_RS09700 PF03979 Sigma-70 factor, region 1.1 RA13_RS09705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RA13_RS09710 PF04816 tRNA (adenine(22)-N(1))-methyltransferase RA13_RS09715 PF01784 NIF3 (NGG1p interacting factor 3) RA13_RS09720 PF02401 LytB protein RA13_RS09730 PF00271 Helicase conserved C-terminal domain RA13_RS09730 PF00270 DEAD/DEAH box helicase RA13_RS09735 PF01261 Xylose isomerase-like TIM barrel RA13_RS09740 PF11116 Protein of unknown function (DUF2624) RA13_RS09745 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RA13_RS09745 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RA13_RS09750 PF01475 Ferric uptake regulator family RA13_RS09765 PF04551 GcpE protein RA13_RS09775 PF06691 Protein of unknown function (DUF1189) RA13_RS09780 PF04306 Protein of unknown function (DUF456) RA13_RS09785 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RA13_RS09785 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RA13_RS09790 PF07690 Major Facilitator Superfamily RA13_RS09795 PF03717 Penicillin-binding Protein dimerisation domain RA13_RS09795 PF00905 Penicillin binding protein transpeptidase domain RA13_RS09800 PF12849 PBP superfamily domain RA13_RS09805 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS09810 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS09815 PF00005 ABC transporter RA13_RS09820 PF00005 ABC transporter RA13_RS09840 PF13439 Glycosyltransferase Family 4 RA13_RS09840 PF00534 Glycosyl transferases group 1 RA13_RS09845 PF00471 Ribosomal protein L33 RA13_RS09850 PF01812 5-formyltetrahydrofolate cyclo-ligase family RA13_RS09860 PF01694 Rhomboid family RA13_RS09865 PF06014 Bacterial protein of unknown function (DUF910) RA13_RS09870 PF00480 ROK family RA13_RS09875 PF00884 Sulfatase RA13_RS09880 PF00246 Zinc carboxypeptidase RA13_RS09890 PF01910 Thiamine-binding protein RA13_RS09895 PF10958 Protein of unknown function (DUF2759) RA13_RS09900 PF00753 Metallo-beta-lactamase superfamily RA13_RS09905 PF11117 Protein of unknown function (DUF2626) RA13_RS09910 PF03960 ArsC family RA13_RS09920 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain RA13_RS09920 PF01740 STAS domain RA13_RS09925 PF01595 Cyclin M transmembrane N-terminal domain RA13_RS09925 PF03471 Transporter associated domain RA13_RS09925 PF00571 CBS domain RA13_RS09930 PF01544 CorA-like Mg2+ transporter protein RA13_RS09935 PF00437 Type II/IV secretion system protein RA13_RS09940 PF00482 Type II secretion system (T2SS), protein F RA13_RS09945 PF07963 Prokaryotic N-terminal methylation motif RA13_RS09950 PF07963 Prokaryotic N-terminal methylation motif RA13_RS09960 PF15980 Putative Competence protein ComGF RA13_RS09965 PF14173 ComG operon protein 7 RA13_RS09970 PF14038 YqzE-like protein RA13_RS09975 PF13028 Protein of unknown function (DUF3889) RA13_RS09990 PF12389 Camelysin metallo-endopeptidase RA13_RS09995 PF08671 Anti-repressor SinI RA13_RS09995 PF01381 Helix-turn-helix RA13_RS10000 PF08671 Anti-repressor SinI RA13_RS10005 PF11079 Bacterial protein YqhG of unknown function RA13_RS10010 PF00271 Helicase conserved C-terminal domain RA13_RS10010 PF00176 SNF2 family N-terminal domain RA13_RS10015 PF08669 Glycine cleavage T-protein C-terminal barrel domain RA13_RS10015 PF01571 Aminomethyltransferase folate-binding domain RA13_RS10020 PF02347 Glycine cleavage system P-protein RA13_RS10025 PF02347 Glycine cleavage system P-protein RA13_RS10030 PF00581 Rhodanese-like domain RA13_RS10035 PF03099 Biotin/lipoate A/B protein ligase family RA13_RS10040 PF01325 Iron dependent repressor, N-terminal DNA binding domain RA13_RS10040 PF02742 Iron dependent repressor, metal binding and dimerisation domain RA13_RS10055 PF07136 Protein of unknown function (DUF1385) RA13_RS10060 PF11085 Conserved membrane protein YqhR RA13_RS10065 PF01220 Dehydroquinase class II RA13_RS10070 PF01321 Creatinase/Prolidase N-terminal domain RA13_RS10070 PF00557 Metallopeptidase family M24 RA13_RS10075 PF08207 Elongation factor P (EF-P) KOW-like domain RA13_RS10075 PF01132 Elongation factor P (EF-P) OB domain RA13_RS10075 PF09285 Elongation factor P, C-terminal RA13_RS10080 PF10942 Protein of unknown function (DUF2619) RA13_RS10090 PF09548 Stage III sporulation protein AB (spore_III_AB) RA13_RS10095 PF06686 Stage III sporulation protein AC/AD protein family RA13_RS10100 PF06686 Stage III sporulation protein AC/AD protein family RA13_RS10105 PF09546 Stage III sporulation protein AE (spore_III_AE) RA13_RS10110 PF09581 Stage III sporulation protein AF (Spore_III_AF) RA13_RS10120 PF12685 SpoIIIAH-like protein RA13_RS10125 PF00364 Biotin-requiring enzyme RA13_RS10130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RA13_RS10130 PF00289 Biotin carboxylase, N-terminal domain RA13_RS10130 PF02785 Biotin carboxylase C-terminal domain RA13_RS10135 PF03780 Asp23 family, cell envelope-related function RA13_RS10140 PF01029 NusB family RA13_RS10145 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RA13_RS10145 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RA13_RS10150 PF13742 OB-fold nucleic acid binding domain RA13_RS10150 PF02601 Exonuclease VII, large subunit RA13_RS10155 PF02609 Exonuclease VII small subunit RA13_RS10160 PF00348 Polyprenyl synthetase RA13_RS10165 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RA13_RS10165 PF02780 Transketolase, C-terminal domain RA13_RS10165 PF02779 Transketolase, pyrimidine binding domain RA13_RS10170 PF01728 FtsJ-like methyltransferase RA13_RS10170 PF01479 S4 domain RA13_RS10175 PF02863 Arginine repressor, C-terminal domain RA13_RS10175 PF01316 Arginine repressor, DNA binding domain RA13_RS10180 PF13476 AAA domain RA13_RS10185 PF17820 PDZ domain RA13_RS10185 PF05580 SpoIVB peptidase S55 RA13_RS10190 PF00072 Response regulator receiver domain RA13_RS10190 PF08769 Sporulation initiation factor Spo0A C terminal RA13_RS10200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RA13_RS10210 PF01520 N-acetylmuramoyl-L-alanine amidase RA13_RS10215 PF03009 Glycerophosphoryl diester phosphodiesterase family RA13_RS10220 PF00108 Thiolase, N-terminal domain RA13_RS10220 PF02803 Thiolase, C-terminal domain RA13_RS10225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RA13_RS10225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RA13_RS10230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RA13_RS10230 PF02770 Acyl-CoA dehydrogenase, middle domain RA13_RS10230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RA13_RS10235 PF00285 Citrate synthase, C-terminal domain RA13_RS10240 PF03972 MmgE/PrpD family RA13_RS10260 PF01515 Phosphate acetyl/butaryl transferase RA13_RS10270 PF00871 Acetokinase family RA13_RS10280 PF00676 Dehydrogenase E1 component RA13_RS10285 PF02779 Transketolase, pyrimidine binding domain RA13_RS10285 PF02780 Transketolase, C-terminal domain RA13_RS10290 PF00364 Biotin-requiring enzyme RA13_RS10290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RA13_RS10290 PF02817 e3 binding domain RA13_RS10300 PF00781 Diacylglycerol kinase catalytic domain RA13_RS10305 PF06491 Disulphide isomerase RA13_RS10310 PF00497 Bacterial extracellular solute-binding proteins, family 3 RA13_RS10315 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS10320 PF00005 ABC transporter RA13_RS10325 PF06081 Aromatic acid exporter family member 1 RA13_RS10325 PF11728 Putative aromatic acid exporter C-terminal domain RA13_RS10330 PF03734 L,D-transpeptidase catalytic domain RA13_RS10340 PF01039 Carboxyl transferase domain RA13_RS10345 PF07687 Peptidase dimerisation domain RA13_RS10345 PF01546 Peptidase family M20/M25/M40 RA13_RS10350 PF09844 Uncharacterized conserved protein (COG2071) RA13_RS10355 PF02096 60Kd inner membrane protein RA13_RS10365 PF00817 impB/mucB/samB family RA13_RS10365 PF11798 IMS family HHH motif RA13_RS10365 PF11799 impB/mucB/samB family C-terminal domain RA13_RS10370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RA13_RS10370 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RA13_RS10375 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RA13_RS10375 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RA13_RS10380 PF12706 Beta-lactamase superfamily domain RA13_RS10385 PF00471 Ribosomal protein L33 RA13_RS10390 PF12146 Serine aminopeptidase, S33 RA13_RS10395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RA13_RS10400 PF01546 Peptidase family M20/M25/M40 RA13_RS10405 PF14748 Pyrroline-5-carboxylate reductase dimerisation RA13_RS10405 PF03807 NADP oxidoreductase coenzyme F420-dependent RA13_RS10410 PF00753 Metallo-beta-lactamase superfamily RA13_RS10415 PF00106 short chain dehydrogenase RA13_RS10420 PF00291 Pyridoxal-phosphate dependent enzyme RA13_RS10425 PF00485 Phosphoribulokinase / Uridine kinase family RA13_RS10450 PF01594 AI-2E family transporter RA13_RS10455 PF14164 YqzH-like protein RA13_RS10460 PF11799 impB/mucB/samB family C-terminal domain RA13_RS10460 PF00817 impB/mucB/samB family RA13_RS10465 PF08863 YolD-like protein RA13_RS10470 PF00583 Acetyltransferase (GNAT) family RA13_RS10475 PF03992 Antibiotic biosynthesis monooxygenase RA13_RS10480 PF13673 Acetyltransferase (GNAT) domain RA13_RS10480 PF04229 GrpB protein RA13_RS10485 PF01521 Iron-sulphur cluster biosynthesis RA13_RS10490 PF10827 Protein of unknown function (DUF2552) RA13_RS10495 PF12146 Serine aminopeptidase, S33 RA13_RS10500 PF13025 Protein of unknown function (DUF3886) RA13_RS10505 PF00248 Aldo/keto reductase family RA13_RS10510 PF13072 Mother cell inhibitor of FtsZ RA13_RS10515 PF00293 NUDIX domain RA13_RS10525 PF01381 Helix-turn-helix RA13_RS10530 PF00710 Asparaginase, N-terminal RA13_RS10530 PF17763 Glutaminase/Asparaginase C-terminal domain RA13_RS10535 PF00206 Lyase RA13_RS10535 PF10415 Fumarase C C-terminus RA13_RS10540 PF03553 Na+/H+ antiporter family RA13_RS10545 PF03949 Malic enzyme, NAD binding domain RA13_RS10545 PF00390 Malic enzyme, N-terminal domain RA13_RS10545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RA13_RS10555 PF01944 Stage II sporulation protein M RA13_RS10560 PF01475 Ferric uptake regulator family RA13_RS10565 PF14004 Protein of unknown function (DUF4227) RA13_RS10570 PF02899 Phage integrase, N-terminal SAM-like domain RA13_RS10570 PF00589 Phage integrase family RA13_RS10575 PF01676 Metalloenzyme superfamily RA13_RS10580 PF01048 Phosphorylase superfamily RA13_RS10585 PF00768 D-alanyl-D-alanine carboxypeptidase RA13_RS10585 PF07943 Penicillin-binding protein 5, C-terminal domain RA13_RS10590 PF01740 STAS domain RA13_RS10595 PF13581 Histidine kinase-like ATPase domain RA13_RS10600 PF04542 Sigma-70 region 2 RA13_RS10600 PF04545 Sigma-70, region 4 RA13_RS10600 PF04539 Sigma-70 region 3 RA13_RS10605 PF12164 Stage V sporulation protein AA RA13_RS10610 PF13782 Stage V sporulation protein AB RA13_RS10615 PF03862 SpoVAC/SpoVAEB sporulation membrane protein RA13_RS10620 PF07451 Stage V sporulation protein AD (SpoVAD) RA13_RS10630 PF14097 Stage V sporulation protein AE1 RA13_RS10635 PF03323 Bacillus/Clostridium GerA spore germination protein RA13_RS10640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RA13_RS10640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RA13_RS10645 PF06207 Protein of unknown function (DUF1002) RA13_RS10650 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RA13_RS10660 PF13229 Right handed beta helix region RA13_RS10670 PF10787 Uncharacterised protein from bacillus cereus group RA13_RS10680 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS10685 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS10690 PF13416 Bacterial extracellular solute-binding protein RA13_RS10705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RA13_RS10705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RA13_RS10710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RA13_RS10710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RA13_RS10720 PF00313 'Cold-shock' DNA-binding domain RA13_RS10725 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) RA13_RS10730 PF10502 Signal peptidase, peptidase S26 RA13_RS10740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RA13_RS10740 PF01872 RibD C-terminal domain RA13_RS10745 PF00677 Lumazine binding domain RA13_RS10750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RA13_RS10750 PF00925 GTP cyclohydrolase II RA13_RS10755 PF00885 6,7-dimethyl-8-ribityllumazine synthase RA13_RS10760 PF00583 Acetyltransferase (GNAT) family RA13_RS10765 PF03745 Domain of unknown function (DUF309) RA13_RS10775 PF02616 Segregation and condensation protein ScpA RA13_RS10780 PF04079 Segregation and condensation complex subunit ScpB RA13_RS10785 PF13047 Protein of unknown function (DUF3907) RA13_RS10790 PF07943 Penicillin-binding protein 5, C-terminal domain RA13_RS10790 PF00768 D-alanyl-D-alanine carboxypeptidase RA13_RS10795 PF07670 Nucleoside recognition RA13_RS10800 PF07670 Nucleoside recognition RA13_RS10805 PF00849 RNA pseudouridylate synthase RA13_RS10805 PF01479 S4 domain RA13_RS10810 PF00578 AhpC/TSA family RA13_RS10815 PF05140 ResB-like family RA13_RS10820 PF01578 Cytochrome C assembly protein RA13_RS10825 PF00072 Response regulator receiver domain RA13_RS10825 PF00486 Transcriptional regulatory protein, C terminal RA13_RS10830 PF18698 Histidine kinase sensor domain RA13_RS10830 PF00672 HAMP domain RA13_RS10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS10830 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS10830 PF00989 PAS fold RA13_RS10835 PF08281 Sigma-70, region 4 RA13_RS10835 PF04542 Sigma-70 region 2 RA13_RS10845 PF01487 Type I 3-dehydroquinase RA13_RS10850 PF01842 ACT domain RA13_RS10850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RA13_RS10850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RA13_RS10855 PF12822 ECF transporter, substrate-specific component RA13_RS10865 PF14493 Helix-turn-helix domain RA13_RS10870 PF00271 Helicase conserved C-terminal domain RA13_RS10870 PF00270 DEAD/DEAH box helicase RA13_RS10875 PF02517 CPBP intramembrane metalloprotease RA13_RS10880 PF01476 LysM domain RA13_RS10885 PF10864 Protein of unknown function (DUF2663) RA13_RS10890 PF00149 Calcineurin-like phosphoesterase RA13_RS10895 PF05389 Negative regulator of genetic competence (MecA) RA13_RS10900 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RA13_RS10900 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RA13_RS10910 PF13367 PrsW family intramembrane metalloprotease RA13_RS10915 PF01471 Putative peptidoglycan binding domain RA13_RS10915 PF07486 Cell Wall Hydrolase RA13_RS10920 PF14620 YpeB sporulation RA13_RS10920 PF03413 Peptidase propeptide and YPEB domain RA13_RS10925 PF07238 PilZ domain RA13_RS10925 PF12945 Flagellar protein YcgR RA13_RS10930 PF17313 Family of unknown function (DUF5359) RA13_RS10935 PF02224 Cytidylate kinase RA13_RS10940 PF00575 S1 RNA binding domain RA13_RS10945 PF01070 FMN-dependent dehydrogenase RA13_RS10950 PF14140 YpzI-like protein RA13_RS10960 PF14045 YIEGIA protein RA13_RS10970 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RA13_RS10970 PF01926 50S ribosome-binding GTPase RA13_RS10975 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RA13_RS10975 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RA13_RS10980 PF10966 Protein of unknown function (DUF2768) RA13_RS10990 PF09547 Stage IV sporulation protein A (spore_IV_A) RA13_RS10995 PF00216 Bacterial DNA-binding protein RA13_RS11000 PF01227 GTP cyclohydrolase I RA13_RS11005 PF02081 Tryptophan RNA-binding attenuator protein RA13_RS11010 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 RA13_RS11015 PF01209 ubiE/COQ5 methyltransferase family RA13_RS11020 PF00348 Polyprenyl synthetase RA13_RS11025 PF00334 Nucleoside diphosphate kinase RA13_RS11030 PF01739 CheR methyltransferase, SAM binding domain RA13_RS11030 PF03705 CheR methyltransferase, all-alpha domain RA13_RS11035 PF01264 Chorismate synthase RA13_RS11045 PF07736 Chorismate mutase type I RA13_RS11050 PF04715 Anthranilate synthase component I, N terminal region RA13_RS11050 PF00425 chorismate binding enzyme RA13_RS11060 PF00218 Indole-3-glycerol phosphate synthase RA13_RS11065 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RA13_RS11070 PF00291 Pyridoxal-phosphate dependent enzyme RA13_RS11075 PF00290 Tryptophan synthase alpha chain RA13_RS11080 PF00155 Aminotransferase class I and II RA13_RS11085 PF02153 Prephenate dehydrogenase RA13_RS11085 PF01842 ACT domain RA13_RS11090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RA13_RS11100 PF08858 IDEAL domain RA13_RS11100 PF08864 UPF0302 domain RA13_RS11105 PF10673 Protein of unknown function (DUF2487) RA13_RS11110 PF00355 Rieske [2Fe-2S] domain RA13_RS11115 PF00033 Cytochrome b/b6/petB RA13_RS11120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RA13_RS11120 PF00032 Cytochrome b(C-terminal)/b6/petD RA13_RS11125 PF07187 Protein of unknown function (DUF1405) RA13_RS11135 PF00190 Cupin RA13_RS11140 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RA13_RS11140 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RA13_RS11145 PF03819 MazG nucleotide pyrophosphohydrolase domain RA13_RS11150 PF01113 Dihydrodipicolinate reductase, N-terminus RA13_RS11150 PF05173 Dihydrodipicolinate reductase, C-terminus RA13_RS11155 PF02142 MGS-like domain RA13_RS11160 PF02585 GlcNAc-PI de-N-acetylase RA13_RS11165 PF13439 Glycosyltransferase Family 4 RA13_RS11165 PF00534 Glycosyl transferases group 1 RA13_RS11170 PF12627 Probable RNA and SrmB- binding site of polymerase A RA13_RS11170 PF13735 tRNA nucleotidyltransferase domain 2 putative RA13_RS11170 PF01743 Poly A polymerase head domain RA13_RS11175 PF03099 Biotin/lipoate A/B protein ligase family RA13_RS11175 PF02237 Biotin protein ligase C terminal domain RA13_RS11175 PF08279 HTH domain RA13_RS11180 PF02548 Ketopantoate hydroxymethyltransferase RA13_RS11185 PF02569 Pantoate-beta-alanine ligase RA13_RS11190 PF02261 Aspartate decarboxylase RA13_RS11195 PF13307 Helicase C-terminal domain RA13_RS11195 PF04851 Type III restriction enzyme, res subunit RA13_RS11195 PF00929 Exonuclease RA13_RS11200 PF14084 Protein of unknown function (DUF4264) RA13_RS11205 PF17881 Domain of unknown function (DUF5590) RA13_RS11205 PF03413 Peptidase propeptide and YPEB domain RA13_RS11210 PF00155 Aminotransferase class I and II RA13_RS11215 PF00152 tRNA synthetases class II (D, K and N) RA13_RS11215 PF01336 OB-fold nucleic acid binding domain RA13_RS11220 PF07261 Replication initiation and membrane attachment RA13_RS11225 PF10576 Iron-sulfur binding domain of endonuclease III RA13_RS11225 PF00633 Helix-hairpin-helix motif RA13_RS11225 PF00730 HhH-GPD superfamily base excision DNA repair protein RA13_RS11235 PF00905 Penicillin binding protein transpeptidase domain RA13_RS11235 PF00912 Transglycosylase RA13_RS11240 PF03838 Recombination protein U RA13_RS11245 PF10720 Protein of unknown function (DUF2515) RA13_RS11255 PF17522 Family of unknown function (DUF5446) RA13_RS11260 PF08807 Bacterial domain of unknown function (DUF1798) RA13_RS11265 PF14178 YppF-like protein RA13_RS11270 PF14179 YppG-like protein RA13_RS11280 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RA13_RS11290 PF13482 RNase_H superfamily RA13_RS11300 PF11122 Inner spore coat protein D RA13_RS11305 PF06908 YspA SLOG family RA13_RS11310 PF05103 DivIVA protein RA13_RS11320 PF01170 Putative RNA methylase family UPF0020 RA13_RS11320 PF02926 THUMP domain RA13_RS11325 PF14139 YpzG-like protein RA13_RS11335 PF13307 Helicase C-terminal domain RA13_RS11345 PF04962 KduI/IolB family RA13_RS11350 PF00356 Bacterial regulatory proteins, lacI family RA13_RS11355 PF00294 pfkB family carbohydrate kinase RA13_RS11360 PF01081 KDPG and KHG aldolase RA13_RS11365 PF03812 2-keto-3-deoxygluconate permease RA13_RS11370 PF02074 Carboxypeptidase Taq (M32) metallopeptidase RA13_RS11375 PF00156 Phosphoribosyl transferase domain RA13_RS11380 PF00860 Permease family RA13_RS11385 PF00195 Chalcone and stilbene synthases, N-terminal domain RA13_RS11385 PF02797 Chalcone and stilbene synthases, C-terminal domain RA13_RS11390 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family RA13_RS11400 PF00350 Dynamin family RA13_RS11405 PF10752 Protein of unknown function (DUF2533) RA13_RS11415 PF01367 5'-3' exonuclease, C-terminal SAM fold RA13_RS11415 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RA13_RS11425 PF13456 Reverse transcriptase-like RA13_RS11430 PF02592 Putative vitamin uptake transporter RA13_RS11435 PF13456 Reverse transcriptase-like RA13_RS11440 PF10782 Zinc-finger RA13_RS11445 PF10819 Protein of unknown function (DUF2564) RA13_RS11455 PF00313 'Cold-shock' DNA-binding domain RA13_RS11460 PF00534 Glycosyl transferases group 1 RA13_RS11460 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase RA13_RS11465 PF04204 Homoserine O-succinyltransferase RA13_RS11475 PF01966 HD domain RA13_RS11480 PF13769 Virulence factor RA13_RS11480 PF08712 Scaffold protein Nfu/NifU N terminal RA13_RS11490 PF06491 Disulphide isomerase RA13_RS11495 PF04445 Putative SAM-dependent methyltransferase RA13_RS11500 PF14005 YpjP-like protein RA13_RS11505 PF04608 Phosphatidylglycerophosphatase A RA13_RS11515 PF00186 Dihydrofolate reductase RA13_RS11525 PF03006 Haemolysin-III related RA13_RS11530 PF00158 Sigma-54 interaction domain RA13_RS11530 PF08461 Ribonuclease R winged-helix domain RA13_RS11535 PF00291 Pyridoxal-phosphate dependent enzyme RA13_RS11535 PF00585 C-terminal regulatory domain of Threonine dehydratase RA13_RS11540 PF10751 Protein of unknown function (DUF2535) RA13_RS11545 PF02630 SCO1/SenC RA13_RS11550 PF13472 GDSL-like Lipase/Acylhydrolase family RA13_RS11555 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) RA13_RS11560 PF17431 Uncharacterized YmpT-like RA13_RS11565 PF01554 MatE RA13_RS11570 PF01047 MarR family RA13_RS11575 PF01625 Peptide methionine sulfoxide reductase RA13_RS11580 PF01641 SelR domain RA13_RS11590 PF09680 Family of unknown function RA13_RS11600 PF06445 GyrI-like small molecule binding domain RA13_RS11600 PF12833 Helix-turn-helix domain RA13_RS11605 PF04740 LXG domain of WXG superfamily RA13_RS11605 PF15652 HNH/Endo VII superfamily toxin with a SHH signature RA13_RS11615 PF13443 Cro/C1-type HTH DNA-binding domain RA13_RS11625 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading RA13_RS11625 PF18416 N-acetylglucosamine binding protein domain 2 RA13_RS11630 PF16738 Starch-binding module 26 RA13_RS11630 PF00128 Alpha amylase, catalytic domain RA13_RS11645 PF00842 Alanine racemase, C-terminal domain RA13_RS11645 PF01168 Alanine racemase, N-terminal domain RA13_RS11650 PF02333 Phytase RA13_RS11655 PF12996 DUF based on E. rectale Gene description (DUF3880) RA13_RS11670 PF00535 Glycosyl transferase family 2 RA13_RS11675 PF00583 Acetyltransferase (GNAT) family RA13_RS11685 PF00202 Aminotransferase class-III RA13_RS11690 PF01144 Coenzyme A transferase RA13_RS11695 PF01144 Coenzyme A transferase RA13_RS11700 PF07687 Peptidase dimerisation domain RA13_RS11700 PF01546 Peptidase family M20/M25/M40 RA13_RS11705 PF00583 Acetyltransferase (GNAT) family RA13_RS11710 PF12544 Lysine-2,3-aminomutase RA13_RS11715 PF14122 YokU-like protein, putative antitoxin RA13_RS11720 PF06855 YozE SAM-like fold RA13_RS11730 PF14162 YozD-like protein RA13_RS11735 PF01569 PAP2 superfamily RA13_RS11740 PF14191 YodL-like RA13_RS11750 PF01048 Phosphorylase superfamily RA13_RS11755 PF02557 D-alanyl-D-alanine carboxypeptidase RA13_RS11765 PF08241 Methyltransferase domain RA13_RS11770 PF01471 Putative peptidoglycan binding domain RA13_RS11770 PF17820 PDZ domain RA13_RS11770 PF03572 Peptidase family S41 RA13_RS11775 PF00474 Sodium:solute symporter family RA13_RS11780 PF11755 Protein of unknown function (DUF3311) RA13_RS11785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RA13_RS11790 PF01738 Dienelactone hydrolase family RA13_RS11795 PF00881 Nitroreductase family RA13_RS11800 PF01638 HxlR-like helix-turn-helix RA13_RS11805 PF14552 Tautomerase enzyme RA13_RS11825 PF00892 EamA-like transporter family RA13_RS11835 PF08830 Protein of unknown function (DUF1806) RA13_RS11840 PF02585 GlcNAc-PI de-N-acetylase RA13_RS11845 PF01740 STAS domain RA13_RS11850 PF14659 Phage integrase, N-terminal SAM-like domain RA13_RS11850 PF00589 Phage integrase family RA13_RS11905 PF03796 DnaB-like helicase C terminal domain RA13_RS11905 PF00772 DnaB-like helicase N terminal domain RA13_RS11925 PF08281 Sigma-70, region 4 RA13_RS11970 PF03354 Phage Terminase RA13_RS12050 PF13457 GW (Gly-Tryp) dipeptide domain RA13_RS12050 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RA13_RS12055 PF12708 Pectate lyase superfamily protein RA13_RS12055 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain RA13_RS12075 PF05105 Bacteriophage holin family RA13_RS12080 PF01471 Putative peptidoglycan binding domain RA13_RS12080 PF01510 N-acetylmuramoyl-L-alanine amidase RA13_RS12080 PF01476 LysM domain RA13_RS12095 PF04634 Protein of unknown function, DUF600 RA13_RS12100 PF04740 LXG domain of WXG superfamily RA13_RS12105 PF01471 Putative peptidoglycan binding domain RA13_RS12105 PF01510 N-acetylmuramoyl-L-alanine amidase RA13_RS12125 PF01554 MatE RA13_RS12130 PF02457 DisA bacterial checkpoint controller nucleotide-binding RA13_RS12130 PF10372 Bacterial membrane-spanning protein N-terminus RA13_RS12140 PF01476 LysM domain RA13_RS12140 PF00877 NlpC/P60 family RA13_RS12145 PF13627 Prokaryotic lipoprotein-attachment site RA13_RS12145 PF00080 Copper/zinc superoxide dismutase (SODC) RA13_RS12150 PF07728 AAA domain (dynein-related subfamily) RA13_RS12155 PF00092 von Willebrand factor type A domain RA13_RS12160 PF00676 Dehydrogenase E1 component RA13_RS12160 PF16870 2-oxoglutarate dehydrogenase C-terminal RA13_RS12160 PF02779 Transketolase, pyrimidine binding domain RA13_RS12165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RA13_RS12165 PF00364 Biotin-requiring enzyme RA13_RS12165 PF02817 e3 binding domain RA13_RS12170 PF01758 Sodium Bile acid symporter family RA13_RS12175 PF00209 Sodium:neurotransmitter symporter family RA13_RS12180 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RA13_RS12180 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RA13_RS12185 PF13249 Squalene-hopene cyclase N-terminal domain RA13_RS12185 PF13243 Squalene-hopene cyclase C-terminal domain RA13_RS12190 PF00171 Aldehyde dehydrogenase family RA13_RS12205 PF08000 Bacterial PH domain RA13_RS12210 PF01258 Prokaryotic dksA/traR C4-type zinc finger RA13_RS12215 PF02525 Flavodoxin-like fold RA13_RS12225 PF00570 HRDC domain RA13_RS12225 PF00271 Helicase conserved C-terminal domain RA13_RS12225 PF00270 DEAD/DEAH box helicase RA13_RS12225 PF16124 RecQ zinc-binding RA13_RS12225 PF09382 RQC domain RA13_RS12230 PF01476 LysM domain RA13_RS12230 PF06725 3D domain RA13_RS12235 PF00474 Sodium:solute symporter family RA13_RS12245 PF00196 Bacterial regulatory proteins, luxR family RA13_RS12245 PF00072 Response regulator receiver domain RA13_RS12250 PF07730 Histidine kinase RA13_RS12255 PF00487 Fatty acid desaturase RA13_RS12265 PF18846 Bacterial archaeo-eukaryotic release factor family 5 RA13_RS12270 PF04238 Protein of unknown function (DUF420) RA13_RS12280 PF01022 Bacterial regulatory protein, arsR family RA13_RS12295 PF06445 GyrI-like small molecule binding domain RA13_RS12300 PF00753 Metallo-beta-lactamase superfamily RA13_RS12305 PF13305 Tetracyclin repressor-like, C-terminal domain RA13_RS12305 PF00440 Bacterial regulatory proteins, tetR family RA13_RS12310 PF12833 Helix-turn-helix domain RA13_RS12310 PF07883 Cupin domain RA13_RS12315 PF01588 Putative tRNA binding domain RA13_RS12320 PF00440 Bacterial regulatory proteins, tetR family RA13_RS12320 PF08361 MAATS-type transcriptional repressor, C-terminal region RA13_RS12325 PF00561 alpha/beta hydrolase fold RA13_RS12340 PF00384 Molybdopterin oxidoreductase RA13_RS12340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RA13_RS12340 PF01568 Molydopterin dinucleotide binding domain RA13_RS12345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RA13_RS12345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RA13_RS12350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RA13_RS12350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RA13_RS12355 PF07690 Major Facilitator Superfamily RA13_RS12360 PF05163 DinB family RA13_RS12365 PF06103 Bacterial protein of unknown function (DUF948) RA13_RS12370 PF00106 short chain dehydrogenase RA13_RS12380 PF01965 DJ-1/PfpI family RA13_RS12390 PF00501 AMP-binding enzyme RA13_RS12390 PF13193 AMP-binding enzyme C-terminal domain RA13_RS12390 PF16197 Ketoacyl-synthetase C-terminal extension RA13_RS12390 PF00109 Beta-ketoacyl synthase, N-terminal domain RA13_RS12390 PF02801 Beta-ketoacyl synthase, C-terminal domain RA13_RS12390 PF00550 Phosphopantetheine attachment site RA13_RS12390 PF00202 Aminotransferase class-III RA13_RS12390 PF00668 Condensation domain RA13_RS12400 PF00668 Condensation domain RA13_RS12400 PF13193 AMP-binding enzyme C-terminal domain RA13_RS12400 PF00550 Phosphopantetheine attachment site RA13_RS12400 PF00975 Thioesterase domain RA13_RS12400 PF00501 AMP-binding enzyme RA13_RS12405 PF02334 Replication terminator protein RA13_RS12410 PF03807 NADP oxidoreductase coenzyme F420-dependent RA13_RS12410 PF14748 Pyrroline-5-carboxylate reductase dimerisation RA13_RS12415 PF00696 Amino acid kinase family RA13_RS12415 PF01472 PUA domain RA13_RS12420 PF03466 LysR substrate binding domain RA13_RS12420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS12425 PF00310 Glutamine amidotransferases class-II RA13_RS12425 PF01493 GXGXG motif RA13_RS12425 PF01645 Conserved region in glutamate synthase RA13_RS12425 PF04898 Glutamate synthase central domain RA13_RS12435 PF08240 Alcohol dehydrogenase GroES-like domain RA13_RS12435 PF00107 Zinc-binding dehydrogenase RA13_RS12440 PF03466 LysR substrate binding domain RA13_RS12440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS12450 PF12728 Helix-turn-helix domain RA13_RS12455 PF00589 Phage integrase family RA13_RS12470 PF05105 Bacteriophage holin family RA13_RS12485 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS12485 PF13176 Tetratricopeptide repeat RA13_RS12500 PF16800 IseA DL-endopeptidase inhibitor RA13_RS12505 PF01263 Aldose 1-epimerase RA13_RS12510 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RA13_RS12515 PF00175 Oxidoreductase NAD-binding domain RA13_RS12515 PF00042 Globin RA13_RS12515 PF00970 Oxidoreductase FAD-binding domain RA13_RS12520 PF00501 AMP-binding enzyme RA13_RS12520 PF00550 Phosphopantetheine attachment site RA13_RS12520 PF13193 AMP-binding enzyme C-terminal domain RA13_RS12520 PF00668 Condensation domain RA13_RS12525 PF00501 AMP-binding enzyme RA13_RS12525 PF00550 Phosphopantetheine attachment site RA13_RS12525 PF13193 AMP-binding enzyme C-terminal domain RA13_RS12525 PF00668 Condensation domain RA13_RS12530 PF00668 Condensation domain RA13_RS12530 PF13193 AMP-binding enzyme C-terminal domain RA13_RS12530 PF00501 AMP-binding enzyme RA13_RS12530 PF00550 Phosphopantetheine attachment site RA13_RS12540 PF13193 AMP-binding enzyme C-terminal domain RA13_RS12540 PF00668 Condensation domain RA13_RS12540 PF00975 Thioesterase domain RA13_RS12540 PF00550 Phosphopantetheine attachment site RA13_RS12540 PF00501 AMP-binding enzyme RA13_RS12545 PF07098 Protein of unknown function (DUF1360) RA13_RS12550 PF02638 Glycosyl hydrolase-like 10 RA13_RS12555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RA13_RS12555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RA13_RS12555 PF02770 Acyl-CoA dehydrogenase, middle domain RA13_RS12560 PF00501 AMP-binding enzyme RA13_RS12560 PF13193 AMP-binding enzyme C-terminal domain RA13_RS12565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RA13_RS12565 PF00289 Biotin carboxylase, N-terminal domain RA13_RS12565 PF02785 Biotin carboxylase C-terminal domain RA13_RS12570 PF00364 Biotin-requiring enzyme RA13_RS12580 PF01039 Carboxyl transferase domain RA13_RS12590 PF09335 SNARE associated Golgi protein RA13_RS12595 PF00483 Nucleotidyl transferase RA13_RS12600 PF04138 GtrA-like protein RA13_RS12620 PF01235 Sodium:alanine symporter family RA13_RS12630 PF00521 DNA gyrase/topoisomerase IV, subunit A RA13_RS12630 PF03989 DNA gyrase C-terminal domain, beta-propeller RA13_RS12635 PF00204 DNA gyrase B RA13_RS12635 PF01751 Toprim domain RA13_RS12635 PF00986 DNA gyrase B subunit, carboxyl terminus RA13_RS12635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS12640 PF13380 CoA binding domain RA13_RS12645 PF02660 Glycerol-3-phosphate acyltransferase RA13_RS12650 PF01521 Iron-sulphur cluster biosynthesis RA13_RS12660 PF03061 Thioesterase superfamily RA13_RS12670 PF08177 Small acid-soluble spore protein N family RA13_RS12675 PF13040 Fur-regulated basic protein B RA13_RS12680 PF00578 AhpC/TSA family RA13_RS12685 PF00330 Aconitase family (aconitate hydratase) RA13_RS12685 PF00694 Aconitase C-terminal domain RA13_RS12695 PF08179 Small acid-soluble spore protein P family RA13_RS12705 PF11084 Protein of unknown function (DUF2621) RA13_RS12710 PF07301 Protein of unknown function (DUF1453) RA13_RS12715 PF00072 Response regulator receiver domain RA13_RS12720 PF02683 Cytochrome C biogenesis protein transmembrane region RA13_RS12725 PF09388 Spo0E like sporulation regulatory protein RA13_RS12730 PF03672 Uncharacterised protein family (UPF0154) RA13_RS12735 PF10747 Sporulation inhibitor of replication protein SirA RA13_RS12740 PF02779 Transketolase, pyrimidine binding domain RA13_RS12740 PF02780 Transketolase, C-terminal domain RA13_RS12740 PF00456 Transketolase, thiamine diphosphate binding domain RA13_RS12745 PF05979 Bacterial protein of unknown function (DUF896) RA13_RS12750 PF00239 Resolvase, N terminal domain RA13_RS12755 PF01476 LysM domain RA13_RS12760 PF00717 Peptidase S24-like RA13_RS12760 PF01726 LexA DNA binding domain RA13_RS12770 PF07875 Coat F domain RA13_RS12775 PF10710 Protein of unknown function (DUF2512) RA13_RS12790 PF05908 Poly-gamma-glutamate hydrolase RA13_RS12795 PF14158 YndJ-like protein RA13_RS12800 PF13761 Domain of unknown function (DUF4166) RA13_RS12810 PF06912 Protein of unknown function (DUF1275) RA13_RS12845 PF04439 Streptomycin adenylyltransferase RA13_RS12850 PF14037 YoqO-like protein RA13_RS12860 PF00005 ABC transporter RA13_RS12875 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS12885 PF00753 Metallo-beta-lactamase superfamily RA13_RS12890 PF02586 SOS response associated peptidase (SRAP) RA13_RS12905 PF01575 MaoC like domain RA13_RS12910 PF06445 GyrI-like small molecule binding domain RA13_RS12910 PF13411 MerR HTH family regulatory protein RA13_RS12915 PF00583 Acetyltransferase (GNAT) family RA13_RS12940 PF01374 Glycosyl hydrolase family 46 RA13_RS12950 PF05995 Cysteine dioxygenase type I RA13_RS13050 PF13419 Haloacid dehalogenase-like hydrolase RA13_RS13060 PF07859 alpha/beta hydrolase fold RA13_RS13080 PF00085 Thioredoxin RA13_RS13085 PF01272 Transcription elongation factor, GreA/GreB, C-term RA13_RS13085 PF03449 Transcription elongation factor, N-terminal RA13_RS13105 PF02627 Carboxymuconolactone decarboxylase family RA13_RS13115 PF00085 Thioredoxin RA13_RS13125 PF00085 Thioredoxin RA13_RS13135 PF01597 Glycine cleavage H-protein RA13_RS13145 PF00440 Bacterial regulatory proteins, tetR family RA13_RS13145 PF16925 Tetracyclin repressor-like, C-terminal domain RA13_RS13150 PF00356 Bacterial regulatory proteins, lacI family RA13_RS13160 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS13175 PF08244 Glycosyl hydrolases family 32 C terminal RA13_RS13175 PF00251 Glycosyl hydrolases family 32 N-terminal domain RA13_RS13235 PF09346 SMI1 / KNR4 family (SUKH-1) RA13_RS13265 PF00722 Glycosyl hydrolases family 16 RA13_RS13275 PF08863 YolD-like protein RA13_RS13315 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH RA13_RS13315 PF04740 LXG domain of WXG superfamily RA13_RS13320 PF00005 ABC transporter RA13_RS13350 PF09346 SMI1 / KNR4 family (SUKH-1) RA13_RS13370 PF00583 Acetyltransferase (GNAT) family RA13_RS13395 PF01510 N-acetylmuramoyl-L-alanine amidase RA13_RS13395 PF01471 Putative peptidoglycan binding domain RA13_RS13420 PF00005 ABC transporter RA13_RS13455 PF00120 Glutamine synthetase, catalytic domain RA13_RS13455 PF03951 Glutamine synthetase, beta-Grasp domain RA13_RS13460 PF13411 MerR HTH family regulatory protein RA13_RS13465 PF06838 Methionine gamma-lyase RA13_RS13470 PF16360 GTP-binding GTPase Middle Region RA13_RS13470 PF01926 50S ribosome-binding GTPase RA13_RS13470 PF13167 GTP-binding GTPase N-terminal RA13_RS13505 PF00149 Calcineurin-like phosphoesterase RA13_RS13510 PF00269 Small, acid-soluble spore proteins, alpha/beta type RA13_RS13540 PF00303 Thymidylate synthase RA13_RS13570 PF00085 Thioredoxin RA13_RS13575 PF00268 Ribonucleotide reductase, small chain RA13_RS13590 PF13392 HNH endonuclease RA13_RS13595 PF00317 Ribonucleotide reductase, all-alpha domain RA13_RS13595 PF08343 Ribonucleotide reductase N-terminal RA13_RS13595 PF14528 LAGLIDADG-like domain RA13_RS13595 PF02867 Ribonucleotide reductase, barrel domain RA13_RS13600 PF07972 NrdI Flavodoxin like RA13_RS13700 PF02223 Thymidylate kinase RA13_RS13705 PF09629 YorP protein RA13_RS13710 PF06725 3D domain RA13_RS13715 PF14579 Helix-hairpin-helix motif RA13_RS13715 PF07733 Bacterial DNA polymerase III alpha NTPase domain RA13_RS13715 PF02811 PHP domain RA13_RS13715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RA13_RS13720 PF17768 RecJ OB domain RA13_RS13720 PF01368 DHH family RA13_RS13730 PF03796 DnaB-like helicase C terminal domain RA13_RS13755 PF09636 XkdW protein RA13_RS13770 PF13229 Right handed beta helix region RA13_RS13775 PF05908 Poly-gamma-glutamate hydrolase RA13_RS13810 PF01068 ATP dependent DNA ligase domain RA13_RS13830 PF14037 YoqO-like protein RA13_RS13895 PF09643 YopX protein RA13_RS13915 PF09467 Hypothetical protein Yopt RA13_RS13920 PF13443 Cro/C1-type HTH DNA-binding domain RA13_RS13930 PF14072 DNA-sulfur modification-associated RA13_RS13940 PF01381 Helix-turn-helix RA13_RS14000 PF17094 Uncharacterised protein family (UPF0715) RA13_RS14015 PF13443 Cro/C1-type HTH DNA-binding domain RA13_RS14075 PF16302 Domain of unknown function (DUF4944) RA13_RS14100 PF00216 Bacterial DNA-binding protein RA13_RS14105 PF09642 YonK protein RA13_RS14205 PF03009 Glycerophosphoryl diester phosphodiesterase family RA13_RS14250 PF01551 Peptidase family M23 RA13_RS14250 PF10145 Phage-related minor tail protein RA13_RS14250 PF01464 Transglycosylase SLT domain RA13_RS14255 PF05709 Phage tail protein RA13_RS14260 PF06605 Prophage endopeptidase tail RA13_RS14270 PF12708 Pectate lyase superfamily protein RA13_RS14270 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain RA13_RS14300 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS14310 PF00817 impB/mucB/samB family RA13_RS14310 PF11798 IMS family HHH motif RA13_RS14310 PF11799 impB/mucB/samB family C-terminal domain RA13_RS14315 PF08863 YolD-like protein RA13_RS14360 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH RA13_RS14360 PF04740 LXG domain of WXG superfamily RA13_RS14370 PF05901 Excalibur calcium-binding domain RA13_RS14370 PF00565 Staphylococcal nuclease homologue RA13_RS14390 PF00004 ATPase family associated with various cellular activities (AAA) RA13_RS14390 PF17866 AAA lid domain RA13_RS14395 PF01520 N-acetylmuramoyl-L-alanine amidase RA13_RS14395 PF05036 Sporulation related domain RA13_RS14405 PF00268 Ribonucleotide reductase, small chain RA13_RS14410 PF08343 Ribonucleotide reductase N-terminal RA13_RS14410 PF00317 Ribonucleotide reductase, all-alpha domain RA13_RS14410 PF02867 Ribonucleotide reductase, barrel domain RA13_RS14415 PF07972 NrdI Flavodoxin like RA13_RS14425 PF14157 YmzC-like protein RA13_RS14430 PF17209 Hfq protein RA13_RS14440 PF12788 YmaF family RA13_RS14455 PF00893 Small Multidrug Resistance protein RA13_RS14460 PF00893 Small Multidrug Resistance protein RA13_RS14465 PF02566 OsmC-like protein RA13_RS14470 PF05908 Poly-gamma-glutamate hydrolase RA13_RS14480 PF00082 Subtilase family RA13_RS14490 PF00067 Cytochrome P450 RA13_RS14500 PF14765 Polyketide synthase dehydratase RA13_RS14500 PF08659 KR domain RA13_RS14500 PF02801 Beta-ketoacyl synthase, C-terminal domain RA13_RS14500 PF00109 Beta-ketoacyl synthase, N-terminal domain RA13_RS14500 PF00550 Phosphopantetheine attachment site RA13_RS14500 PF16197 Ketoacyl-synthetase C-terminal extension RA13_RS14500 PF00668 Condensation domain RA13_RS14500 PF13193 AMP-binding enzyme C-terminal domain RA13_RS14500 PF00501 AMP-binding enzyme RA13_RS14505 PF08659 KR domain RA13_RS14505 PF14765 Polyketide synthase dehydratase RA13_RS14505 PF16197 Ketoacyl-synthetase C-terminal extension RA13_RS14505 PF02801 Beta-ketoacyl synthase, C-terminal domain RA13_RS14505 PF00550 Phosphopantetheine attachment site RA13_RS14505 PF08242 Methyltransferase domain RA13_RS14505 PF00109 Beta-ketoacyl synthase, N-terminal domain RA13_RS14520 PF00378 Enoyl-CoA hydratase/isomerase RA13_RS14525 PF00378 Enoyl-CoA hydratase/isomerase RA13_RS14530 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal RA13_RS14530 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal RA13_RS14540 PF00550 Phosphopantetheine attachment site RA13_RS14550 PF00698 Acyl transferase domain RA13_RS14555 PF00753 Metallo-beta-lactamase superfamily RA13_RS14560 PF13977 BetI-type transcriptional repressor, C-terminal RA13_RS14560 PF00440 Bacterial regulatory proteins, tetR family RA13_RS14575 PF01119 DNA mismatch repair protein, C-terminal domain RA13_RS14575 PF08676 MutL C terminal dimerisation domain RA13_RS14580 PF05188 MutS domain II RA13_RS14580 PF01624 MutS domain I RA13_RS14580 PF00488 MutS domain V RA13_RS14580 PF05190 MutS family domain IV RA13_RS14580 PF05192 MutS domain III RA13_RS14585 PF10628 Outer spore coat protein E (CotE) RA13_RS14590 PF06133 Control of competence regulator ComK, YlbF/YmcA RA13_RS14595 PF00919 Uncharacterized protein family UPF0004 RA13_RS14595 PF04055 Radical SAM superfamily RA13_RS14595 PF01938 TRAM domain RA13_RS14600 PF00302 Chloramphenicol acetyltransferase RA13_RS14605 PF00155 Aminotransferase class I and II RA13_RS14610 PF00107 Zinc-binding dehydrogenase RA13_RS14610 PF08240 Alcohol dehydrogenase GroES-like domain RA13_RS14615 PF04232 Stage V sporulation protein S (SpoVS) RA13_RS14620 PF13277 YmdB-like protein RA13_RS14625 PF01966 HD domain RA13_RS14625 PF00013 KH domain RA13_RS14625 PF12072 Domain of unknown function (DUF3552) RA13_RS14630 PF00144 Beta-lactamase RA13_RS14635 PF00154 recA bacterial DNA recombination protein RA13_RS14645 PF01066 CDP-alcohol phosphatidyltransferase RA13_RS14650 PF13464 Domain of unknown function (DUF4115) RA13_RS14655 PF11868 Protein of unknown function (DUF3388) RA13_RS14660 PF11588 Protein of unknown function (DUF3243) RA13_RS14670 PF00675 Insulinase (Peptidase family M16) RA13_RS14670 PF05193 Peptidase M16 inactive domain RA13_RS14675 PF05193 Peptidase M16 inactive domain RA13_RS14685 PF07690 Major Facilitator Superfamily RA13_RS14690 PF00392 Bacterial regulatory proteins, gntR family RA13_RS14690 PF07702 UTRA domain RA13_RS14695 PF17854 FtsK alpha domain RA13_RS14695 PF01580 FtsK/SpoIIIE family RA13_RS14695 PF09397 Ftsk gamma domain RA13_RS14700 PF14035 YlzJ-like protein RA13_RS14705 PF00574 Clp protease RA13_RS14710 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RA13_RS14710 PF17770 Ribonuclease J C-terminal domain RA13_RS14710 PF00753 Metallo-beta-lactamase superfamily RA13_RS14715 PF00701 Dihydrodipicolinate synthetase family RA13_RS14720 PF00696 Amino acid kinase family RA13_RS14720 PF13840 ACT domain RA13_RS14725 PF02774 Semialdehyde dehydrogenase, dimerisation domain RA13_RS14725 PF01118 Semialdehyde dehydrogenase, NAD binding domain RA13_RS14730 PF02441 Flavoprotein RA13_RS14735 PF16924 Dipicolinate synthase subunit A N-terminal domain RA13_RS14735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RA13_RS14740 PF05239 PRC-barrel domain RA13_RS14745 PF05193 Peptidase M16 inactive domain RA13_RS14745 PF00675 Insulinase (Peptidase family M16) RA13_RS14750 PF01522 Polysaccharide deacetylase RA13_RS14755 PF00575 S1 RNA binding domain RA13_RS14755 PF00013 KH domain RA13_RS14755 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RA13_RS14755 PF03725 3' exoribonuclease family, domain 2 RA13_RS14755 PF01138 3' exoribonuclease family, domain 1 RA13_RS14760 PF00312 Ribosomal protein S15 RA13_RS14765 PF06574 FAD synthetase RA13_RS14765 PF01687 Riboflavin kinase RA13_RS14770 PF01509 TruB family pseudouridylate synthase (N terminal domain) RA13_RS14770 PF16198 tRNA pseudouridylate synthase B C-terminal domain RA13_RS14775 PF02033 Ribosome-binding factor A RA13_RS14780 PF04456 Protein of unknown function (DUF503) RA13_RS14785 PF04760 Translation initiation factor IF-2, N-terminal region RA13_RS14785 PF00009 Elongation factor Tu GTP binding domain RA13_RS14785 PF11987 Translation-initiation factor 2 RA13_RS14790 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RA13_RS14795 PF04296 Protein of unknown function (DUF448) RA13_RS14800 PF08529 NusA N-terminal domain RA13_RS14800 PF00575 S1 RNA binding domain RA13_RS14800 PF13184 NusA-like KH domain RA13_RS14805 PF17384 RimP C-terminal SH3 domain RA13_RS14805 PF02576 RimP N-terminal domain RA13_RS14845 PF01255 Putative undecaprenyl diphosphate synthase RA13_RS14850 PF01765 Ribosome recycling factor RA13_RS14855 PF00696 Amino acid kinase family RA13_RS14860 PF00889 Elongation factor TS RA13_RS14865 PF00318 Ribosomal protein S2 RA13_RS14875 PF04542 Sigma-70 region 2 RA13_RS14875 PF04539 Sigma-70 region 3 RA13_RS14875 PF04545 Sigma-70, region 4 RA13_RS14880 PF03975 CheD chemotactic sensory transduction RA13_RS14885 PF04509 CheC-like family RA13_RS14890 PF01584 CheW-like domain RA13_RS14895 PF02895 Signal transducing histidine kinase, homodimeric domain RA13_RS14895 PF01584 CheW-like domain RA13_RS14895 PF07194 P2 response regulator binding domain RA13_RS14895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS14895 PF01627 Hpt domain RA13_RS14900 PF00072 Response regulator receiver domain RA13_RS14900 PF01339 CheB methylesterase RA13_RS14905 PF10609 NUBPL iron-transfer P-loop NTPase RA13_RS14910 PF00448 SRP54-type protein, GTPase domain RA13_RS14915 PF00771 FHIPEP family RA13_RS14920 PF01312 FlhB HrpN YscU SpaS Family RA13_RS14925 PF01311 Bacterial export proteins, family 1 RA13_RS14930 PF01313 Bacterial export proteins, family 3 RA13_RS14935 PF00813 FliP family RA13_RS14940 PF04347 Flagellar biosynthesis protein, FliO RA13_RS14945 PF00072 Response regulator receiver domain RA13_RS14950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RA13_RS14950 PF04509 CheC-like family RA13_RS14955 PF02154 Flagellar motor switch protein FliM RA13_RS14955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RA13_RS14960 PF03748 Flagellar basal body-associated protein FliL RA13_RS14965 PF06289 Flagellar and Swarming motility proteins RA13_RS14970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RA13_RS14970 PF00460 Flagella basal body rod protein RA13_RS14975 PF03963 Flagellar hook capping protein - N-terminal region RA13_RS14980 PF02120 Flagellar hook-length control protein FliK RA13_RS14985 PF03448 MgtE intracellular N domain RA13_RS14990 PF02050 Flagellar FliJ protein RA13_RS14995 PF18269 T3SS EscN ATPase C-terminal domain RA13_RS14995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RA13_RS14995 PF02874 ATP synthase alpha/beta family, beta-barrel domain RA13_RS15000 PF02108 Flagellar assembly protein FliH RA13_RS15005 PF01706 FliG C-terminal domain RA13_RS15005 PF14841 FliG middle domain RA13_RS15005 PF14842 FliG N-terminal domain RA13_RS15010 PF01514 Secretory protein of YscJ/FliF family RA13_RS15010 PF08345 Flagellar M-ring protein C-terminal RA13_RS15015 PF02049 Flagellar hook-basal body complex protein FliE RA13_RS15020 PF00460 Flagella basal body rod protein RA13_RS15020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RA13_RS15025 PF00460 Flagella basal body rod protein RA13_RS15030 PF06018 CodY GAF-like domain RA13_RS15030 PF08222 CodY helix-turn-helix domain RA13_RS15035 PF00004 ATPase family associated with various cellular activities (AAA) RA13_RS15035 PF07724 AAA domain (Cdc48 subfamily) RA13_RS15035 PF10431 C-terminal, D2-small domain, of ClpB protein RA13_RS15040 PF00227 Proteasome subunit RA13_RS15045 PF02899 Phage integrase, N-terminal SAM-like domain RA13_RS15045 PF00589 Phage integrase family RA13_RS15050 PF01134 Glucose inhibited division protein A RA13_RS15055 PF01131 DNA topoisomerase RA13_RS15055 PF01751 Toprim domain RA13_RS15055 PF01396 Topoisomerase DNA binding C4 zinc finger RA13_RS15060 PF02481 DNA recombination-mediator protein A RA13_RS15065 PF00549 CoA-ligase RA13_RS15065 PF02629 CoA binding domain RA13_RS15070 PF00549 CoA-ligase RA13_RS15070 PF08442 ATP-grasp domain RA13_RS15075 PF01312 FlhB HrpN YscU SpaS Family RA13_RS15085 PF01351 Ribonuclease HII RA13_RS15090 PF01926 50S ribosome-binding GTPase RA13_RS15095 PF01245 Ribosomal protein L19 RA13_RS15100 PF01746 tRNA (Guanine-1)-methyltransferase RA13_RS15105 PF05239 PRC-barrel domain RA13_RS15105 PF01782 RimM N-terminal domain RA13_RS15110 PF11068 YlqD protein RA13_RS15120 PF00886 Ribosomal protein S16 RA13_RS15130 PF04297 Putative helix-turn-helix protein, YlxM / p13 like RA13_RS15135 PF02881 SRP54-type protein, helical bundle domain RA13_RS15135 PF00448 SRP54-type protein, GTPase domain RA13_RS15140 PF02463 RecF/RecN/SMC N terminal domain RA13_RS15140 PF06470 SMC proteins Flexible Hinge Domain RA13_RS15145 PF00035 Double-stranded RNA binding motif RA13_RS15145 PF14622 Ribonuclease-III-like RA13_RS15150 PF00550 Phosphopantetheine attachment site RA13_RS15160 PF00698 Acyl transferase domain RA13_RS15165 PF02504 Fatty acid synthesis protein RA13_RS15170 PF03061 Thioesterase superfamily RA13_RS15175 PF00270 DEAD/DEAH box helicase RA13_RS15175 PF00271 Helicase conserved C-terminal domain RA13_RS15175 PF17191 RecG wedge domain RA13_RS15180 PF03313 Serine dehydratase alpha chain RA13_RS15185 PF01842 ACT domain RA13_RS15185 PF03315 Serine dehydratase beta chain RA13_RS15190 PF02734 DAK2 domain RA13_RS15190 PF13684 Dihydroxyacetone kinase family RA13_RS15195 PF03780 Asp23 family, cell envelope-related function RA13_RS15200 PF00830 Ribosomal L28 family RA13_RS15205 PF08183 Stage V sporulation protein family RA13_RS15210 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain RA13_RS15210 PF04263 Thiamin pyrophosphokinase, catalytic domain RA13_RS15215 PF00834 Ribulose-phosphate 3 epimerase family RA13_RS15220 PF03193 RsgA GTPase RA13_RS15220 PF16745 RsgA N-terminal domain RA13_RS15225 PF00069 Protein kinase domain RA13_RS15225 PF03793 PASTA domain RA13_RS15235 PF04055 Radical SAM superfamily RA13_RS15240 PF01189 16S rRNA methyltransferase RsmB/F RA13_RS15240 PF01029 NusB family RA13_RS15245 PF00551 Formyl transferase RA13_RS15245 PF02911 Formyl transferase, C-terminal domain RA13_RS15250 PF01327 Polypeptide deformylase RA13_RS15255 PF17764 3′ DNA-binding domain (3′BD) RA13_RS15255 PF04851 Type III restriction enzyme, res subunit RA13_RS15255 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RA13_RS15255 PF00271 Helicase conserved C-terminal domain RA13_RS15255 PF18074 Primosomal protein N C-terminal domain RA13_RS15260 PF04127 DNA / pantothenate metabolism flavoprotein RA13_RS15260 PF02441 Flavoprotein RA13_RS15265 PF01192 RNA polymerase Rpb6 RA13_RS15270 PF00625 Guanylate kinase RA13_RS15275 PF04025 Domain of unknown function (DUF370) RA13_RS15280 PF03755 YicC-like family, N-terminal region RA13_RS15280 PF08340 Domain of unknown function (DUF1732) RA13_RS15285 PF00690 Cation transporter/ATPase, N-terminus RA13_RS15285 PF00689 Cation transporting ATPase, C-terminus RA13_RS15290 PF05670 NFACT protein RNA binding domain RA13_RS15305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RA13_RS15315 PF14306 PUA-like domain RA13_RS15315 PF01747 ATP-sulfurylase RA13_RS15320 PF01384 Phosphate transporter family RA13_RS15325 PF01507 Phosphoadenosine phosphosulfate reductase family RA13_RS15330 PF00156 Phosphoribosyl transferase domain RA13_RS15335 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RA13_RS15340 PF01180 Dihydroorotate dehydrogenase RA13_RS15345 PF00175 Oxidoreductase NAD-binding domain RA13_RS15345 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B RA13_RS15350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RA13_RS15350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RA13_RS15350 PF02142 MGS-like domain RA13_RS15355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RA13_RS15355 PF00117 Glutamine amidotransferase class-I RA13_RS15360 PF01979 Amidohydrolase family RA13_RS15365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RA13_RS15365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RA13_RS15370 PF00860 Permease family RA13_RS15375 PF00156 Phosphoribosyl transferase domain RA13_RS15385 PF00849 RNA pseudouridylate synthase RA13_RS15385 PF01479 S4 domain RA13_RS15395 PF01258 Prokaryotic dksA/traR C4-type zinc finger RA13_RS15400 PF08264 Anticodon-binding domain of tRNA RA13_RS15400 PF00133 tRNA synthetases class I (I, L, M and V) RA13_RS15410 PF05103 DivIVA protein RA13_RS15415 PF17774 Putative RNA-binding domain in YlmH RA13_RS15415 PF01479 S4 domain RA13_RS15420 PF02325 YGGT family RA13_RS15425 PF04472 Cell division protein SepF RA13_RS15430 PF01168 Alanine racemase, N-terminal domain RA13_RS15435 PF02578 Multi-copper polyphenol oxidoreductase laccase RA13_RS15440 PF05239 PRC-barrel domain RA13_RS15445 PF01546 Peptidase family M20/M25/M40 RA13_RS15445 PF07687 Peptidase dimerisation domain RA13_RS15450 PF00005 ABC transporter RA13_RS15455 PF04545 Sigma-70, region 4 RA13_RS15455 PF04542 Sigma-70 region 2 RA13_RS15455 PF04539 Sigma-70 region 3 RA13_RS15460 PF04542 Sigma-70 region 2 RA13_RS15460 PF04545 Sigma-70, region 4 RA13_RS15465 PF03419 Sporulation factor SpoIIGA RA13_RS15470 PF00082 Subtilase family RA13_RS15470 PF05922 Peptidase inhibitor I9 RA13_RS15475 PF12327 FtsZ family, C-terminal domain RA13_RS15475 PF00091 Tubulin/FtsZ family, GTPase domain RA13_RS15485 PF06947 Protein of unknown function (DUF1290) RA13_RS15495 PF05949 Bacterial protein of unknown function (DUF881) RA13_RS15500 PF08478 POTRA domain, FtsQ-type RA13_RS15505 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RA13_RS15505 PF01565 FAD binding domain RA13_RS15510 PF04101 Glycosyltransferase family 28 C-terminal domain RA13_RS15510 PF03033 Glycosyltransferase family 28 N-terminal domain RA13_RS15515 PF01098 Cell cycle protein RA13_RS15520 PF08245 Mur ligase middle domain RA13_RS15520 PF02875 Mur ligase family, glutamate ligase domain RA13_RS15525 PF00953 Glycosyl transferase family 4 RA13_RS15525 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RA13_RS15530 PF08245 Mur ligase middle domain RA13_RS15530 PF01225 Mur ligase family, catalytic domain RA13_RS15530 PF02875 Mur ligase family, glutamate ligase domain RA13_RS15535 PF03717 Penicillin-binding Protein dimerisation domain RA13_RS15535 PF03793 PASTA domain RA13_RS15535 PF00905 Penicillin binding protein transpeptidase domain RA13_RS15540 PF03793 PASTA domain RA13_RS15540 PF03717 Penicillin-binding Protein dimerisation domain RA13_RS15540 PF00905 Penicillin binding protein transpeptidase domain RA13_RS15550 PF01795 MraW methylase family RA13_RS15555 PF02381 MraZ protein, putative antitoxin-like RA13_RS15560 PF10079 Bacillithiol biosynthesis BshC RA13_RS15570 PF00583 Acetyltransferase (GNAT) family RA13_RS15580 PF01783 Ribosomal L32p protein family RA13_RS15585 PF02620 Large ribosomal RNA subunit accumulation protein YceD RA13_RS15590 PF05636 HIGH Nucleotidyl Transferase RA13_RS15595 PF13180 PDZ domain RA13_RS15595 PF05362 Lon protease (S16) C-terminal proteolytic domain RA13_RS15600 PF01734 Patatin-like phospholipase RA13_RS15605 PF07670 Nucleoside recognition RA13_RS15610 PF01467 Cytidylyltransferase-like RA13_RS15620 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) RA13_RS15625 PF06133 Control of competence regulator ComK, YlbF/YmcA RA13_RS15635 PF14003 YlbE-like protein RA13_RS15640 PF14071 Putative coat protein RA13_RS15645 PF00188 Cysteine-rich secretory protein family RA13_RS15645 PF14504 CAP-associated N-terminal RA13_RS15650 PF00571 CBS domain RA13_RS15655 PF08868 YugN-like family RA13_RS15660 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) RA13_RS15665 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RA13_RS15670 PF00510 Cytochrome c oxidase subunit III RA13_RS15675 PF00115 Cytochrome C and Quinol oxidase polypeptide I RA13_RS15680 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RA13_RS15680 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RA13_RS15680 PF00034 Cytochrome c RA13_RS15685 PF01040 UbiA prenyltransferase family RA13_RS15690 PF02628 Cytochrome oxidase assembly protein RA13_RS15695 PF02785 Biotin carboxylase C-terminal domain RA13_RS15695 PF00289 Biotin carboxylase, N-terminal domain RA13_RS15695 PF00364 Biotin-requiring enzyme RA13_RS15695 PF00682 HMGL-like RA13_RS15695 PF02436 Conserved carboxylase domain RA13_RS15695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RA13_RS15700 PF01098 Cell cycle protein RA13_RS15705 PF07408 Protein of unknown function (DUF1507) RA13_RS15720 PF02562 PhoH-like protein RA13_RS15720 PF13638 PIN domain RA13_RS15725 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) RA13_RS15730 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) RA13_RS15735 PF14036 YlaH-like protein RA13_RS15740 PF14492 Elongation Factor G, domain II RA13_RS15740 PF03144 Elongation factor Tu domain 2 RA13_RS15740 PF00009 Elongation factor Tu GTP binding domain RA13_RS15740 PF00679 Elongation factor G C-terminus RA13_RS15745 PF17259 Family of unknown function (DUF5325) RA13_RS15755 PF13490 Putative zinc-finger RA13_RS15760 PF07504 Fungalysin/Thermolysin Propeptide Motif RA13_RS15760 PF02868 Thermolysin metallopeptidase, alpha-helical domain RA13_RS15760 PF01447 Thermolysin metallopeptidase, catalytic domain RA13_RS15760 PF03413 Peptidase propeptide and YPEB domain RA13_RS15765 PF04072 Leucine carboxyl methyltransferase RA13_RS15770 PF00583 Acetyltransferase (GNAT) family RA13_RS15775 PF00459 Inositol monophosphatase family RA13_RS15785 PF06335 Protein of unknown function (DUF1054) RA13_RS15790 PF05256 Uncharacterised protein family (UPF0223) RA13_RS15795 PF01276 Orn/Lys/Arg decarboxylase, major domain RA13_RS15795 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RA13_RS15800 PF13790 SR1 protein RA13_RS15815 PF07992 Pyridine nucleotide-disulphide oxidoreductase RA13_RS15815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RA13_RS15820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RA13_RS15820 PF00364 Biotin-requiring enzyme RA13_RS15820 PF02817 e3 binding domain RA13_RS15825 PF02779 Transketolase, pyrimidine binding domain RA13_RS15825 PF02780 Transketolase, C-terminal domain RA13_RS15830 PF00676 Dehydrogenase E1 component RA13_RS15835 PF10368 Putative cell-wall binding lipoprotein RA13_RS15845 PF01327 Polypeptide deformylase RA13_RS15855 PF07288 Protein of unknown function (DUF1447) RA13_RS15860 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RA13_RS15860 PF00753 Metallo-beta-lactamase superfamily RA13_RS15860 PF17770 Ribonuclease J C-terminal domain RA13_RS15865 PF13382 Adenine deaminase C-terminal domain RA13_RS15865 PF01979 Amidohydrolase family RA13_RS15870 PF02254 TrkA-N domain RA13_RS15870 PF02080 TrkA-C domain RA13_RS15875 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like RA13_RS15880 PF00989 PAS fold RA13_RS15880 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS15880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS15885 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RA13_RS15885 PF18277 AbrB C-terminal domain RA13_RS15895 PF17447 Uncharacterized YkpC-like RA13_RS15900 PF02073 Thermophilic metalloprotease (M29) RA13_RS15905 PF08546 Ketopantoate reductase PanE/ApbA C terminal RA13_RS15905 PF02558 Ketopantoate reductase PanE/ApbA RA13_RS15910 PF12848 ABC transporter RA13_RS15910 PF00005 ABC transporter RA13_RS15920 PF10502 Signal peptidase, peptidase S26 RA13_RS15925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RA13_RS15925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RA13_RS15930 PF00294 pfkB family carbohydrate kinase RA13_RS15935 PF00455 DeoR C terminal sensor domain RA13_RS15935 PF08220 DeoR-like helix-turn-helix domain RA13_RS15940 PF02687 FtsX-like permease family RA13_RS15940 PF12704 MacB-like periplasmic core domain RA13_RS15950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RA13_RS15955 PF04893 Yip1 domain RA13_RS15960 PF00005 ABC transporter RA13_RS15960 PF00664 ABC transporter transmembrane region RA13_RS15965 PF00005 ABC transporter RA13_RS15965 PF00664 ABC transporter transmembrane region RA13_RS15970 PF02597 ThiS family RA13_RS15975 PF02391 MoaE protein RA13_RS15980 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RA13_RS15985 PF00994 Probable molybdopterin binding domain RA13_RS15985 PF03454 MoeA C-terminal region (domain IV) RA13_RS15985 PF03453 MoeA N-terminal region (domain I and II) RA13_RS15990 PF00899 ThiF family RA13_RS15995 PF12804 MobA-like NTP transferase domain RA13_RS16010 PF00578 AhpC/TSA family RA13_RS16015 PF10417 C-terminal domain of 1-Cys peroxiredoxin RA13_RS16015 PF00578 AhpC/TSA family RA13_RS16020 PF00924 Mechanosensitive ion channel RA13_RS16025 PF03698 Uncharacterised protein family (UPF0180) RA13_RS16030 PF07687 Peptidase dimerisation domain RA13_RS16030 PF01546 Peptidase family M20/M25/M40 RA13_RS16035 PF14602 Hexapeptide repeat of succinyl-transferase RA13_RS16035 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal RA13_RS16035 PF00132 Bacterial transferase hexapeptide (six repeats) RA13_RS16040 PF00258 Flavodoxin RA13_RS16050 PF00258 Flavodoxin RA13_RS16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS16055 PF03466 LysR substrate binding domain RA13_RS16065 PF14156 Antirepressor AbbA RA13_RS16070 PF04308 Ribonuclease H-like RA13_RS16075 PF08796 Protein of unknown function (DUF1797) RA13_RS16080 PF05067 Manganese containing catalase RA13_RS16085 PF00563 EAL domain RA13_RS16085 PF10388 EAL-domain associated signalling protein domain RA13_RS16095 PF10518 TAT (twin-arginine translocation) pathway signal sequence RA13_RS16095 PF00149 Calcineurin-like phosphoesterase RA13_RS16100 PF03734 L,D-transpeptidase catalytic domain RA13_RS16100 PF01476 LysM domain RA13_RS16105 PF07690 Major Facilitator Superfamily RA13_RS16110 PF14177 YkyB-like protein RA13_RS16115 PF01584 CheW-like domain RA13_RS16115 PF00072 Response regulator receiver domain RA13_RS16120 PF00155 Aminotransferase class I and II RA13_RS16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS16125 PF08447 PAS fold RA13_RS16125 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS16125 PF00989 PAS fold RA13_RS16130 PF00905 Penicillin binding protein transpeptidase domain RA13_RS16130 PF03717 Penicillin-binding Protein dimerisation domain RA13_RS16135 PF00188 Cysteine-rich secretory protein family RA13_RS16140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RA13_RS16140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RA13_RS16145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RA13_RS16145 PF00672 HAMP domain RA13_RS16145 PF02743 Cache domain RA13_RS16150 PF00583 Acetyltransferase (GNAT) family RA13_RS16160 PF11132 Transcriptional regulator protein (SplA) RA13_RS16165 PF02896 PEP-utilising enzyme, TIM barrel domain RA13_RS16165 PF00391 PEP-utilising enzyme, mobile domain RA13_RS16165 PF05524 PEP-utilising enzyme, N-terminal RA13_RS16170 PF00381 PTS HPr component phosphorylation site RA13_RS16175 PF00367 phosphotransferase system, EIIB RA13_RS16175 PF02378 Phosphotransferase system, EIIC RA13_RS16175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RA13_RS16180 PF00874 PRD domain RA13_RS16180 PF03123 CAT RNA binding domain RA13_RS16185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RA13_RS16185 PF00356 Bacterial regulatory proteins, lacI family RA13_RS16190 PF00557 Metallopeptidase family M24 RA13_RS16190 PF01321 Creatinase/Prolidase N-terminal domain RA13_RS16205 PF00578 AhpC/TSA family RA13_RS16210 PF01943 Polysaccharide biosynthesis protein RA13_RS16215 PF07486 Cell Wall Hydrolase RA13_RS16225 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) RA13_RS16235 PF11514 Protein of unknown function (DUF3219) RA13_RS16240 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain RA13_RS16240 PF01740 STAS domain RA13_RS16245 PF14489 QueF-like protein RA13_RS16250 PF04055 Radical SAM superfamily RA13_RS16255 PF01242 6-pyruvoyl tetrahydropterin synthase RA13_RS16260 PF06508 Queuosine biosynthesis protein QueC RA13_RS16275 PF00004 ATPase family associated with various cellular activities (AAA) RA13_RS16275 PF17871 AAA lid domain RA13_RS16275 PF07724 AAA domain (Cdc48 subfamily) RA13_RS16275 PF10431 C-terminal, D2-small domain, of ClpB protein RA13_RS16280 PF01618 MotA/TolQ/ExbB proton channel family RA13_RS16285 PF13677 Membrane MotB of proton-channel complex MotA/MotB RA13_RS16285 PF00691 OmpA family RA13_RS16290 PF01047 MarR family RA13_RS16295 PF02743 Cache domain RA13_RS16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS16295 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS16305 PF09388 Spo0E like sporulation regulatory protein RA13_RS16315 PF03079 ARD/ARD' family RA13_RS16320 PF00596 Class II Aldolase and Adducin N-terminal domain RA13_RS16330 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain RA13_RS16330 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain RA13_RS16335 PF00155 Aminotransferase class I and II RA13_RS16340 PF00795 Carbon-nitrogen hydrolase RA13_RS16345 PF01636 Phosphotransferase enzyme family RA13_RS16350 PF01008 Initiation factor 2 subunit family RA13_RS16355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RA13_RS16355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RA13_RS16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS16360 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS16360 PF13188 PAS domain RA13_RS16360 PF13426 PAS domain RA13_RS16360 PF00989 PAS fold RA13_RS16365 PF01757 Acyltransferase family RA13_RS16375 PF04239 Protein of unknown function (DUF421) RA13_RS16380 PF02386 Cation transport protein RA13_RS16385 PF01435 Peptidase family M48 RA13_RS16390 PF08876 Domain of unknown function (DUF1836) RA13_RS16395 PF00269 Small, acid-soluble spore proteins, alpha/beta type RA13_RS16400 PF12791 Anti-sigma factor N-terminus RA13_RS16405 PF04542 Sigma-70 region 2 RA13_RS16410 PF03741 Integral membrane protein TerC family RA13_RS16420 PF09335 SNARE associated Golgi protein RA13_RS16440 PF02735 Ku70/Ku80 beta-barrel domain RA13_RS16445 PF01068 ATP dependent DNA ligase domain RA13_RS16465 PF00149 Calcineurin-like phosphoesterase RA13_RS16475 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase RA13_RS16480 PF01047 MarR family RA13_RS16495 PF13411 MerR HTH family regulatory protein RA13_RS16500 PF03448 MgtE intracellular N domain RA13_RS16500 PF01769 Divalent cation transporter RA13_RS16500 PF00571 CBS domain RA13_RS16505 PF11132 Transcriptional regulator protein (SplA) RA13_RS16510 PF03413 Peptidase propeptide and YPEB domain RA13_RS16550 PF02361 Cobalt transport protein RA13_RS16555 PF01740 STAS domain RA13_RS16565 PF01717 Cobalamin-independent synthase, Catalytic domain RA13_RS16565 PF08267 Cobalamin-independent synthase, N-terminal domain RA13_RS16570 PF00300 Histidine phosphatase superfamily (branch 1) RA13_RS16575 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RA13_RS16585 PF13181 Tetratricopeptide repeat RA13_RS16585 PF00535 Glycosyl transferase family 2 RA13_RS16600 PF02566 OsmC-like protein RA13_RS16605 PF01047 MarR family RA13_RS16610 PF02566 OsmC-like protein RA13_RS16615 PF00171 Aldehyde dehydrogenase family RA13_RS16620 PF00696 Amino acid kinase family RA13_RS16620 PF01472 PUA domain RA13_RS16625 PF01842 ACT domain RA13_RS16625 PF00551 Formyl transferase RA13_RS16630 PF00893 Small Multidrug Resistance protein RA13_RS16635 PF00893 Small Multidrug Resistance protein RA13_RS16640 PF13302 Acetyltransferase (GNAT) domain RA13_RS16645 PF12867 DinB superfamily RA13_RS16660 PF03551 Transcriptional regulator PadR-like family RA13_RS16665 PF04239 Protein of unknown function (DUF421) RA13_RS16670 PF03061 Thioesterase superfamily RA13_RS16680 PF10282 Lactonase, 7-bladed beta-propeller RA13_RS16685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RA13_RS16685 PF00005 ABC transporter RA13_RS16690 PF00877 NlpC/P60 family RA13_RS16695 PF13378 Enolase C-terminal domain-like RA13_RS16695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RA13_RS16700 PF02016 LD-carboxypeptidase N-terminal domain RA13_RS16700 PF17676 LD-carboxypeptidase C-terminal domain RA13_RS16705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RA13_RS16720 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS16725 PF04951 D-aminopeptidase RA13_RS16730 PF14748 Pyrroline-5-carboxylate reductase dimerisation RA13_RS16730 PF03807 NADP oxidoreductase coenzyme F420-dependent RA13_RS16735 PF13180 PDZ domain RA13_RS16745 PF00535 Glycosyl transferase family 2 RA13_RS16750 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RA13_RS16755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RA13_RS16760 PF13520 Amino acid permease RA13_RS16765 PF01865 Protein of unknown function DUF47 RA13_RS16770 PF01384 Phosphate transporter family RA13_RS16775 PF14171 Toxin SpoIISA, type II toxin-antitoxin system RA13_RS16780 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system RA13_RS16790 PF01510 N-acetylmuramoyl-L-alanine amidase RA13_RS16790 PF01471 Putative peptidoglycan binding domain RA13_RS16790 PF01476 LysM domain RA13_RS16795 PF04688 SPP1 phage holin RA13_RS16800 PF10779 Haemolysin XhlA RA13_RS16810 PF09693 Phage uncharacterised protein (Phage_XkdX) RA13_RS16815 PF09636 XkdW protein RA13_RS16830 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) RA13_RS16835 PF04865 Baseplate J-like protein RA13_RS16840 PF10934 Protein of unknown function (DUF2634) RA13_RS16845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RA13_RS16850 PF10844 Protein of unknown function (DUF2577) RA13_RS16860 PF01476 LysM domain RA13_RS16865 PF01464 Transglycosylase SLT domain RA13_RS16875 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC RA13_RS16880 PF09393 Phage tail tube protein RA13_RS16885 PF04984 Phage tail sheath protein subtilisin-like domain RA13_RS16885 PF17482 Phage tail sheath C-terminal domain RA13_RS16885 PF17481 Phage tail sheath protein beta-sandwich domain RA13_RS16900 PF04883 Bacteriophage HK97-gp10, putative tail-component RA13_RS16905 PF12206 Domain of unknown function (DUF3599) RA13_RS16910 PF11436 Protein of unknown function (DUF3199) RA13_RS16915 PF05065 Phage capsid family RA13_RS16925 PF04860 Phage portal protein RA13_RS16930 PF04466 Phage terminase large subunit RA13_RS16930 PF17288 Terminase RNAseH like domain RA13_RS16935 PF03592 Terminase small subunit RA13_RS16935 PF10668 Phage terminase small subunit RA13_RS16940 PF08281 Sigma-70, region 4 RA13_RS16945 PF17356 Phage-like element PBSX protein XtrA RA13_RS16955 PF01695 IstB-like ATP binding protein RA13_RS16970 PF01381 Helix-turn-helix RA13_RS16975 PF06114 IrrE N-terminal-like domain RA13_RS16980 PF05908 Poly-gamma-glutamate hydrolase RA13_RS16985 PF08000 Bacterial PH domain RA13_RS16990 PF01510 N-acetylmuramoyl-L-alanine amidase RA13_RS16990 PF01476 LysM domain RA13_RS16990 PF01471 Putative peptidoglycan binding domain RA13_RS17005 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS17010 PF05163 DinB family RA13_RS17015 PF01925 Sulfite exporter TauE/SafE RA13_RS17020 PF08666 SAF domain RA13_RS17020 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RA13_RS17025 PF01232 Mannitol dehydrogenase Rossmann domain RA13_RS17025 PF08125 Mannitol dehydrogenase C-terminal domain RA13_RS17040 PF02614 Glucuronate isomerase RA13_RS17050 PF05163 DinB family RA13_RS17055 PF07992 Pyridine nucleotide-disulphide oxidoreductase RA13_RS17060 PF07849 Protein of unknown function (DUF1641) RA13_RS17070 PF13536 Putative multidrug resistance efflux transporter RA13_RS17075 PF00005 ABC transporter RA13_RS17080 PF03649 Uncharacterised protein family (UPF0014) RA13_RS17085 PF02602 Uroporphyrinogen-III synthase HemD RA13_RS17110 PF00067 Cytochrome P450 RA13_RS17120 PF00293 NUDIX domain RA13_RS17125 PF11611 Domain of unknown function (DUF4352) RA13_RS17130 PF07849 Protein of unknown function (DUF1641) RA13_RS17135 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RA13_RS17135 PF12838 4Fe-4S dicluster domain RA13_RS17135 PF01568 Molydopterin dinucleotide binding domain RA13_RS17135 PF00384 Molybdopterin oxidoreductase RA13_RS17135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RA13_RS17140 PF14172 Domain of unknown function (DUF4309) RA13_RS17145 PF10990 Protein of unknown function (DUF2809) RA13_RS17150 PF10901 Protein of unknown function (DUF2690) RA13_RS17155 PF11738 Protein of unknown function (DUF3298) RA13_RS17155 PF01522 Polysaccharide deacetylase RA13_RS17155 PF13739 Deacetylase PdaC RA13_RS17165 PF09388 Spo0E like sporulation regulatory protein RA13_RS17175 PF02308 MgtC family RA13_RS17180 PF14040 Deoxyribonuclease NucA/NucB RA13_RS17235 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH RA13_RS17235 PF04740 LXG domain of WXG superfamily RA13_RS17250 PF05684 Protein of unknown function (DUF819) RA13_RS17260 PF01053 Cys/Met metabolism PLP-dependent enzyme RA13_RS17265 PF01053 Cys/Met metabolism PLP-dependent enzyme RA13_RS17270 PF00756 Putative esterase RA13_RS17280 PF13673 Acetyltransferase (GNAT) domain RA13_RS17305 PF00580 UvrD/REP helicase N-terminal domain RA13_RS17305 PF13361 UvrD-like helicase C-terminal domain RA13_RS17310 PF14069 Stage VI sporulation protein F RA13_RS17325 PF07098 Protein of unknown function (DUF1360) RA13_RS17330 PF07552 Spore Coat Protein X and V domain RA13_RS17340 PF07552 Spore Coat Protein X and V domain RA13_RS17345 PF10612 Spore coat protein Z RA13_RS17350 PF10612 Spore coat protein Z RA13_RS17355 PF14153 Spore coat protein CotO RA13_RS17365 PF08543 Phosphomethylpyrimidine kinase RA13_RS17370 PF00899 ThiF family RA13_RS17375 PF05690 Thiazole biosynthesis protein ThiG RA13_RS17380 PF02597 ThiS family RA13_RS17385 PF01266 FAD dependent oxidoreductase RA13_RS17390 PF02581 Thiamine monophosphate synthase RA13_RS17395 PF03070 TENA/THI-4/PQQC family RA13_RS17400 PF00999 Sodium/hydrogen exchanger family RA13_RS17400 PF02080 TrkA-C domain RA13_RS17400 PF02254 TrkA-N domain RA13_RS17410 PF00149 Calcineurin-like phosphoesterase RA13_RS17415 PF00849 RNA pseudouridylate synthase RA13_RS17420 PF01513 ATP-NAD kinase RA13_RS17425 PF04607 Region found in RelA / SpoT proteins RA13_RS17435 PF01928 CYTH domain RA13_RS17440 PF01464 Transglycosylase SLT domain RA13_RS17445 PF01152 Bacterial-like globin RA13_RS17460 PF01432 Peptidase family M3 RA13_RS17460 PF08439 Oligopeptidase F RA13_RS17465 PF06054 Competence protein CoiA-like family RA13_RS17470 PF05389 Negative regulator of genetic competence (MecA) RA13_RS17475 PF03741 Integral membrane protein TerC family RA13_RS17480 PF03960 ArsC family RA13_RS17485 PF13508 Acetyltransferase (GNAT) domain RA13_RS17500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RA13_RS17500 PF00005 ABC transporter RA13_RS17505 PF00005 ABC transporter RA13_RS17505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RA13_RS17510 PF12911 N-terminal TM domain of oligopeptide transport permease C RA13_RS17510 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS17515 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS17520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RA13_RS17530 PF00579 tRNA synthetases class I (W and Y) RA13_RS17535 PF12227 Protein of unknown function (DUF3603) RA13_RS17540 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS17540 PF12911 N-terminal TM domain of oligopeptide transport permease C RA13_RS17545 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS17550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RA13_RS17555 PF00005 ABC transporter RA13_RS17555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RA13_RS17560 PF00005 ABC transporter RA13_RS17560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RA13_RS17565 PF10026 Predicted Zn-dependent protease (DUF2268) RA13_RS17570 PF00109 Beta-ketoacyl synthase, N-terminal domain RA13_RS17570 PF02801 Beta-ketoacyl synthase, C-terminal domain RA13_RS17575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RA13_RS17575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RA13_RS17585 PF10815 ComZ RA13_RS17590 PF02608 ABC transporter substrate-binding protein PnrA-like RA13_RS17605 PF11151 Protein of unknown function (DUF2929) RA13_RS17610 PF14168 YjzC-like protein RA13_RS17615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RA13_RS17615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RA13_RS17620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RA13_RS17620 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RA13_RS17625 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RA13_RS17625 PF00117 Glutamine amidotransferase class-I RA13_RS17630 PF00202 Aminotransferase class-III RA13_RS17635 PF00696 Amino acid kinase family RA13_RS17645 PF01118 Semialdehyde dehydrogenase, NAD binding domain RA13_RS17645 PF02774 Semialdehyde dehydrogenase, dimerisation domain RA13_RS17650 PF07690 Major Facilitator Superfamily RA13_RS17655 PF01565 FAD binding domain RA13_RS17665 PF01883 Iron-sulfur cluster assembly protein RA13_RS17680 PF12758 Protein of unknown function (DUF3813) RA13_RS17685 PF12690 Intracellular proteinase inhibitor RA13_RS17690 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RA13_RS17690 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RA13_RS17695 PF02645 Uncharacterised protein, DegV family COG1307 RA13_RS17700 PF12650 Domain of unknown function (DUF3784) RA13_RS17710 PF13509 S1 domain RA13_RS17710 PF17783 CvfB-like winged helix domain RA13_RS17715 PF04461 Protein of unknown function (DUF520) RA13_RS17720 PF02574 Homocysteine S-methyltransferase RA13_RS17720 PF02219 Methylenetetrahydrofolate reductase RA13_RS17725 PF13673 Acetyltransferase (GNAT) domain RA13_RS17730 PF18014 Acetyltransferase (GNAT) domain RA13_RS17730 PF13673 Acetyltransferase (GNAT) domain RA13_RS17735 PF07690 Major Facilitator Superfamily RA13_RS17740 PF13378 Enolase C-terminal domain-like RA13_RS17740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RA13_RS17745 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RA13_RS17750 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) RA13_RS17760 PF01507 Phosphoadenosine phosphosulfate reductase family RA13_RS17765 PF14306 PUA-like domain RA13_RS17765 PF01747 ATP-sulfurylase RA13_RS17785 PF13599 Pentapeptide repeats (9 copies) RA13_RS17800 PF05163 DinB family RA13_RS17805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RA13_RS17805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RA13_RS17810 PF00356 Bacterial regulatory proteins, lacI family RA13_RS17815 PF01040 UbiA prenyltransferase family RA13_RS17820 PF02311 AraC-like ligand binding domain RA13_RS17820 PF12833 Helix-turn-helix domain RA13_RS17825 PF01554 MatE RA13_RS17835 PF13537 Glutamine amidotransferase domain RA13_RS17835 PF00733 Asparagine synthase RA13_RS17840 PF10949 Protein of unknown function (DUF2777) RA13_RS17850 PF07457 Protein of unknown function (DUF1516) RA13_RS17855 PF01557 Fumarylacetoacetate (FAA) hydrolase family RA13_RS17860 PF08757 CotH kinase protein RA13_RS17865 PF09388 Spo0E like sporulation regulatory protein RA13_RS17870 PF04235 Protein of unknown function (DUF418) RA13_RS17880 PF10803 Spore germination GerPB RA13_RS17885 PF10737 Spore germination protein GerPC RA13_RS17895 PF10970 Spore germination protein GerPE RA13_RS17900 PF10676 Spore germination protein gerPA/gerPF RA13_RS17910 PF13476 AAA domain RA13_RS17915 PF12320 Type 5 capsule protein repressor C-terminal domain RA13_RS17915 PF00149 Calcineurin-like phosphoesterase RA13_RS17920 PF12705 PD-(D/E)XK nuclease superfamily RA13_RS17920 PF00580 UvrD/REP helicase N-terminal domain RA13_RS17920 PF13361 UvrD-like helicase C-terminal domain RA13_RS17925 PF12705 PD-(D/E)XK nuclease superfamily RA13_RS17925 PF13361 UvrD-like helicase C-terminal domain RA13_RS17930 PF02915 Rubrerythrin RA13_RS17935 PF03860 Domain of Unknown Function (DUF326) RA13_RS17940 PF12793 Sugar transport-related sRNA regulator N-term RA13_RS17940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RA13_RS17945 PF07690 Major Facilitator Superfamily RA13_RS17950 PF05145 Transition state regulatory protein AbrB RA13_RS17955 PF01047 MarR family RA13_RS17960 PF01494 FAD binding domain RA13_RS17965 PF10502 Signal peptidase, peptidase S26 RA13_RS17970 PF09335 SNARE associated Golgi protein RA13_RS17980 PF11755 Protein of unknown function (DUF3311) RA13_RS17985 PF00474 Sodium:solute symporter family RA13_RS17990 PF05901 Excalibur calcium-binding domain RA13_RS17995 PF06338 ComK protein RA13_RS18000 PF08858 IDEAL domain RA13_RS18010 PF00355 Rieske [2Fe-2S] domain RA13_RS18010 PF01266 FAD dependent oxidoreductase RA13_RS18015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RA13_RS18025 PF00378 Enoyl-CoA hydratase/isomerase RA13_RS18030 PF00171 Aldehyde dehydrogenase family RA13_RS18035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RA13_RS18035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RA13_RS18040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RA13_RS18040 PF02770 Acyl-CoA dehydrogenase, middle domain RA13_RS18040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RA13_RS18045 PF00108 Thiolase, N-terminal domain RA13_RS18045 PF02803 Thiolase, C-terminal domain RA13_RS18050 PF00300 Histidine phosphatase superfamily (branch 1) RA13_RS18055 PF01032 FecCD transport family RA13_RS18060 PF01032 FecCD transport family RA13_RS18065 PF01497 Periplasmic binding protein RA13_RS18070 PF00107 Zinc-binding dehydrogenase RA13_RS18070 PF08240 Alcohol dehydrogenase GroES-like domain RA13_RS18075 PF00583 Acetyltransferase (GNAT) family RA13_RS18080 PF00082 Subtilase family RA13_RS18080 PF05922 Peptidase inhibitor I9 RA13_RS18085 PF16491 CAAX prenyl protease N-terminal, five membrane helices RA13_RS18085 PF01435 Peptidase family M48 RA13_RS18100 PF13460 NAD(P)H-binding RA13_RS18105 PF03099 Biotin/lipoate A/B protein ligase family RA13_RS18105 PF10437 Bacterial lipoate protein ligase C-terminus RA13_RS18110 PF12706 Beta-lactamase superfamily domain RA13_RS18115 PF14149 YhfH-like protein RA13_RS18120 PF00375 Sodium:dicarboxylate symporter family RA13_RS18125 PF05343 M42 glutamyl aminopeptidase RA13_RS18135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RA13_RS18135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RA13_RS18145 PF17932 Tetracyclin repressor-like, C-terminal domain RA13_RS18145 PF00440 Bacterial regulatory proteins, tetR family RA13_RS18150 PF01593 Flavin containing amine oxidoreductase RA13_RS18160 PF01208 Uroporphyrinogen decarboxylase (URO-D) RA13_RS18165 PF00912 Transglycosylase RA13_RS18165 PF00905 Penicillin binding protein transpeptidase domain RA13_RS18170 PF03992 Antibiotic biosynthesis monooxygenase RA13_RS18180 PF01546 Peptidase family M20/M25/M40 RA13_RS18180 PF07687 Peptidase dimerisation domain RA13_RS18185 PF12787 EcsC protein family RA13_RS18190 PF05975 Bacterial ABC transporter protein EcsB RA13_RS18195 PF00005 ABC transporter RA13_RS18200 PF01230 HIT domain RA13_RS18205 PF00266 Aminotransferase class-V RA13_RS18210 PF17099 Tryptophan transporter TrpP RA13_RS18220 PF12732 YtxH-like protein RA13_RS18225 PF01047 MarR family RA13_RS18230 PF08963 Protein of unknown function (DUF1878) RA13_RS18240 PF11667 Putative zincin peptidase RA13_RS18250 PF09680 Family of unknown function RA13_RS18255 PF09680 Family of unknown function RA13_RS18265 PF14147 Sporulation protein YhaL RA13_RS18270 PF01966 HD domain RA13_RS18275 PF13514 AAA domain RA13_RS18280 PF00149 Calcineurin-like phosphoesterase RA13_RS18290 PF13732 Domain of unknown function (DUF4162) RA13_RS18290 PF00005 ABC transporter RA13_RS18295 PF14120 YhzD-like protein RA13_RS18300 PF00378 Enoyl-CoA hydratase/isomerase RA13_RS18310 PF02080 TrkA-C domain RA13_RS18315 PF00999 Sodium/hydrogen exchanger family RA13_RS18320 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RA13_RS18325 PF04055 Radical SAM superfamily RA13_RS18340 PF06133 Control of competence regulator ComK, YlbF/YmcA RA13_RS18345 PF04286 Protein of unknown function (DUF445) RA13_RS18355 PF14398 YheC/D like ATP-grasp RA13_RS18360 PF14398 YheC/D like ATP-grasp RA13_RS18365 PF17277 Family of unknown function (DUF5342) RA13_RS18370 PF00269 Small, acid-soluble spore proteins, alpha/beta type RA13_RS18380 PF13460 NAD(P)H-binding RA13_RS18385 PF00664 ABC transporter transmembrane region RA13_RS18385 PF00005 ABC transporter RA13_RS18390 PF00005 ABC transporter RA13_RS18390 PF00664 ABC transporter transmembrane region RA13_RS18395 PF00582 Universal stress protein family RA13_RS18400 PF03553 Na+/H+ antiporter family RA13_RS18405 PF01063 Amino-transferase class IV RA13_RS18410 PF01522 Polysaccharide deacetylase RA13_RS18415 PF02146 Sir2 family RA13_RS18420 PF00924 Mechanosensitive ion channel RA13_RS18425 PF17444 Uncharacterized YhdX-like RA13_RS18430 PF03009 Glycerophosphoryl diester phosphodiesterase family RA13_RS18435 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RA13_RS18440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RA13_RS18445 PF00571 CBS domain RA13_RS18445 PF01595 Cyclin M transmembrane N-terminal domain RA13_RS18445 PF03471 Transporter associated domain RA13_RS18455 PF13411 MerR HTH family regulatory protein RA13_RS18460 PF03471 Transporter associated domain RA13_RS18460 PF00571 CBS domain RA13_RS18460 PF01595 Cyclin M transmembrane N-terminal domain RA13_RS18465 PF01370 NAD dependent epimerase/dehydratase family RA13_RS18470 PF01266 FAD dependent oxidoreductase RA13_RS18475 PF01553 Acyltransferase RA13_RS18480 PF00248 Aldo/keto reductase family RA13_RS18485 PF08281 Sigma-70, region 4 RA13_RS18485 PF04542 Sigma-70 region 2 RA13_RS18490 PF13800 Sigma factor regulator N-terminal RA13_RS18490 PF13791 Sigma factor regulator C-terminal RA13_RS18495 PF17453 Sigma-M inhibitor RA13_RS18500 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RA13_RS18500 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RA13_RS18505 PF00171 Aldehyde dehydrogenase family RA13_RS18510 PF01546 Peptidase family M20/M25/M40 RA13_RS18515 PF00324 Amino acid permease RA13_RS18520 PF00583 Acetyltransferase (GNAT) family RA13_RS18540 PF13520 Amino acid permease RA13_RS18550 PF00285 Citrate synthase, C-terminal domain RA13_RS18555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS18555 PF03466 LysR substrate binding domain RA13_RS18560 PF00877 NlpC/P60 family RA13_RS18560 PF01476 LysM domain RA13_RS18565 PF00245 Alkaline phosphatase RA13_RS18570 PF04293 SpoVR like protein RA13_RS18575 PF05552 Conserved TM helix RA13_RS18580 PF02082 Transcriptional regulator RA13_RS18585 PF01476 LysM domain RA13_RS18585 PF00877 NlpC/P60 family RA13_RS18590 PF13028 Protein of unknown function (DUF3889) RA13_RS18595 PF14148 YhdB-like protein RA13_RS18600 PF03358 NADPH-dependent FMN reductase RA13_RS18605 PF00072 Response regulator receiver domain RA13_RS18605 PF00196 Bacterial regulatory proteins, luxR family RA13_RS18610 PF13185 GAF domain RA13_RS18610 PF07730 Histidine kinase RA13_RS18615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RA13_RS18615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RA13_RS18615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RA13_RS18615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RA13_RS18620 PF01266 FAD dependent oxidoreductase RA13_RS18620 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RA13_RS18625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RA13_RS18625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RA13_RS18630 PF00230 Major intrinsic protein RA13_RS18635 PF04309 Glycerol-3-phosphate responsive antiterminator RA13_RS18640 PF00202 Aminotransferase class-III RA13_RS18650 PF00583 Acetyltransferase (GNAT) family RA13_RS18650 PF00795 Carbon-nitrogen hydrolase RA13_RS18655 PF13419 Haloacid dehalogenase-like hydrolase RA13_RS18660 PF00571 CBS domain RA13_RS18665 PF17326 Family of unknown function (DUF5365) RA13_RS18670 PF00849 RNA pseudouridylate synthase RA13_RS18670 PF01479 S4 domain RA13_RS18675 PF04203 Sortase domain RA13_RS18685 PF01339 CheB methylesterase RA13_RS18685 PF03705 CheR methyltransferase, all-alpha domain RA13_RS18685 PF01739 CheR methyltransferase, SAM binding domain RA13_RS18685 PF08448 PAS fold RA13_RS18690 PF07875 Coat F domain RA13_RS18700 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) RA13_RS18710 PF00375 Sodium:dicarboxylate symporter family RA13_RS18715 PF07694 5TMR of 5TMR-LYT RA13_RS18715 PF00990 Diguanylate cyclase, GGDEF domain RA13_RS18720 PF03180 NLPA lipoprotein RA13_RS18730 PF00313 'Cold-shock' DNA-binding domain RA13_RS18735 PF12679 ABC-2 family transporter protein RA13_RS18740 PF00005 ABC transporter RA13_RS18745 PF00005 ABC transporter RA13_RS18750 PF00392 Bacterial regulatory proteins, gntR family RA13_RS18765 PF03358 NADPH-dependent FMN reductase RA13_RS18770 PF07690 Major Facilitator Superfamily RA13_RS18780 PF01047 MarR family RA13_RS18785 PF04285 Protein of unknown function (DUF444) RA13_RS18790 PF06798 PrkA serine protein kinase C-terminal domain RA13_RS18790 PF08298 PrkA AAA domain RA13_RS18800 PF04519 Polymer-forming cytoskeletal RA13_RS18805 PF13171 Protein of unknown function (DUF4004) RA13_RS18810 PF00588 SpoU rRNA Methylase family RA13_RS18815 PF12671 Putative amidase domain RA13_RS18820 PF08331 Domain of unknown function (DUF1730) RA13_RS18835 PF01381 Helix-turn-helix RA13_RS18845 PF00253 Ribosomal protein S14p/S29e RA13_RS18850 PF00296 Luciferase-like monooxygenase RA13_RS18855 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS18860 PF09084 NMT1/THI5 like RA13_RS18870 PF00199 Catalase RA13_RS18870 PF06628 Catalase-related immune-responsive RA13_RS18875 PF13040 Fur-regulated basic protein B RA13_RS18880 PF01964 Radical SAM ThiC family RA13_RS18880 PF13667 ThiC-associated domain RA13_RS18890 PF07070 SpoOM protein RA13_RS19005 PF14540 Nucleotidyltransferase-like RA13_RS19005 PF18576 Helix-turn-helix domain RA13_RS19010 PF11023 Zinc-ribbon containing domain RA13_RS19015 PF01475 Ferric uptake regulator family RA13_RS19020 PF00578 AhpC/TSA family RA13_RS19025 PF00202 Aminotransferase class-III RA13_RS19030 PF06081 Aromatic acid exporter family member 1 RA13_RS19035 PF00005 ABC transporter RA13_RS19035 PF00664 ABC transporter transmembrane region RA13_RS19040 PF04167 Protein of unknown function (DUF402) RA13_RS19045 PF14182 YgaB-like protein RA13_RS19050 PF04259 Small, acid-soluble spore protein, gamma-type RA13_RS19065 PF00730 HhH-GPD superfamily base excision DNA repair protein RA13_RS19065 PF14815 NUDIX domain RA13_RS19070 PF04307 LexA-binding, inner membrane-associated putative hydrolase RA13_RS19075 PF09586 Bacterial membrane protein YfhO RA13_RS19080 PF00535 Glycosyl transferase family 2 RA13_RS19085 PF00561 alpha/beta hydrolase fold RA13_RS19090 PF13630 SdpI/YhfL protein family RA13_RS19095 PF08239 Bacterial SH3 domain RA13_RS19100 PF14043 WVELL protein RA13_RS19105 PF08176 Small acid-soluble spore protein K family RA13_RS19110 PF07690 Major Facilitator Superfamily RA13_RS19115 PF08838 Protein of unknown function (DUF1811) RA13_RS19120 PF02631 RecX family RA13_RS19125 PF01370 NAD dependent epimerase/dehydratase family RA13_RS19125 PF08338 Domain of unknown function (DUF1731) RA13_RS19130 PF14152 YfhE-like protein RA13_RS19135 PF14151 YfhD-like protein RA13_RS19140 PF00881 Nitroreductase family RA13_RS19145 PF02567 Phenazine biosynthesis-like protein RA13_RS19150 PF01032 FecCD transport family RA13_RS19155 PF01032 FecCD transport family RA13_RS19165 PF01497 Periplasmic binding protein RA13_RS19175 PF01047 MarR family RA13_RS19180 PF07690 Major Facilitator Superfamily RA13_RS19185 PF12867 DinB superfamily RA13_RS19190 PF00107 Zinc-binding dehydrogenase RA13_RS19190 PF08240 Alcohol dehydrogenase GroES-like domain RA13_RS19195 PF01337 Barstar (barnase inhibitor) RA13_RS19200 PF01757 Acyltransferase family RA13_RS19205 PF10400 Virulence activator alpha C-term RA13_RS19205 PF03551 Transcriptional regulator PadR-like family RA13_RS19220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RA13_RS19225 PF07681 DoxX RA13_RS19230 PF00664 ABC transporter transmembrane region RA13_RS19230 PF00005 ABC transporter RA13_RS19235 PF00664 ABC transporter transmembrane region RA13_RS19235 PF00005 ABC transporter RA13_RS19240 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain RA13_RS19240 PF12708 Pectate lyase superfamily protein RA13_RS19245 PF00367 phosphotransferase system, EIIB RA13_RS19245 PF02378 Phosphotransferase system, EIIC RA13_RS19250 PF01418 Helix-turn-helix domain, rpiR family RA13_RS19250 PF01380 SIS domain RA13_RS19255 PF02056 Family 4 glycosyl hydrolase RA13_RS19255 PF11975 Family 4 glycosyl hydrolase C-terminal domain RA13_RS19260 PF06013 Proteins of 100 residues with WXG RA13_RS19275 PF17353 Family of unknown function (DUF5381) RA13_RS19280 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RA13_RS19285 PF08141 Small acid-soluble spore protein H family RA13_RS19290 PF01590 GAF domain RA13_RS19290 PF02954 Bacterial regulatory protein, Fis family RA13_RS19290 PF00158 Sigma-54 interaction domain RA13_RS19295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RA13_RS19295 PF07992 Pyridine nucleotide-disulphide oxidoreductase RA13_RS19300 PF00364 Biotin-requiring enzyme RA13_RS19300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RA13_RS19300 PF02817 e3 binding domain RA13_RS19310 PF00676 Dehydrogenase E1 component RA13_RS19320 PF01207 Dihydrouridine synthase (Dus) RA13_RS19325 PF05958 tRNA (Uracil-5-)-methyltransferase RA13_RS19325 PF01938 TRAM domain RA13_RS19335 PF00730 HhH-GPD superfamily base excision DNA repair protein RA13_RS19340 PF01544 CorA-like Mg2+ transporter protein RA13_RS19350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RA13_RS19350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RA13_RS19355 PF01522 Polysaccharide deacetylase RA13_RS19365 PF08756 YfkB-like domain RA13_RS19365 PF04055 Radical SAM superfamily RA13_RS19370 PF00924 Mechanosensitive ion channel RA13_RS19375 PF14167 YfkD-like protein RA13_RS19380 PF01699 Sodium/calcium exchanger protein RA13_RS19385 PF07690 Major Facilitator Superfamily RA13_RS19390 PF03631 Virulence factor BrkB RA13_RS19400 PF01451 Low molecular weight phosphotyrosine protein phosphatase RA13_RS19405 PF06569 Protein of unknown function (DUF1128) RA13_RS19410 PF07690 Major Facilitator Superfamily RA13_RS19415 PF01487 Type I 3-dehydroquinase RA13_RS19420 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RA13_RS19420 PF08501 Shikimate dehydrogenase substrate binding domain RA13_RS19425 PF07690 Major Facilitator Superfamily RA13_RS19430 PF00356 Bacterial regulatory proteins, lacI family RA13_RS19435 PF01965 DJ-1/PfpI family RA13_RS19440 PF02872 5'-nucleotidase, C-terminal domain RA13_RS19440 PF00149 Calcineurin-like phosphoesterase RA13_RS19445 PF00881 Nitroreductase family RA13_RS19450 PF07702 UTRA domain RA13_RS19450 PF00392 Bacterial regulatory proteins, gntR family RA13_RS19455 PF00128 Alpha amylase, catalytic domain RA13_RS19455 PF16657 Maltogenic Amylase, C-terminal domain RA13_RS19460 PF00367 phosphotransferase system, EIIB RA13_RS19460 PF02378 Phosphotransferase system, EIIC RA13_RS19470 PF09350 Domain of unknown function (DUF1992) RA13_RS19475 PF00884 Sulfatase RA13_RS19480 PF00367 phosphotransferase system, EIIB RA13_RS19480 PF02378 Phosphotransferase system, EIIC RA13_RS19485 PF00557 Metallopeptidase family M24 RA13_RS19490 PF11588 Protein of unknown function (DUF3243) RA13_RS19500 PF11121 Protein of unknown function (DUF2639) RA13_RS19505 PF03475 3-alpha domain RA13_RS19505 PF03473 MOSC domain RA13_RS19510 PF00708 Acylphosphatase RA13_RS19515 PF02898 Nitric oxide synthase, oxygenase domain RA13_RS19520 PF00753 Metallo-beta-lactamase superfamily RA13_RS19525 PF03600 Citrate transporter RA13_RS19530 PF03401 Tripartite tricarboxylate transporter family receptor RA13_RS19535 PF08279 HTH domain RA13_RS19535 PF12431 Transcriptional regulator RA13_RS19535 PF00072 Response regulator receiver domain RA13_RS19545 PF00939 Sodium:sulfate symporter transmembrane region RA13_RS19555 PF00544 Pectate lyase RA13_RS19560 PF11181 Heat induced stress protein YflT RA13_RS19565 PF11486 Protein of unknown function (DUF3212) RA13_RS19570 PF01497 Periplasmic binding protein RA13_RS19575 PF01032 FecCD transport family RA13_RS19580 PF01032 FecCD transport family RA13_RS19585 PF00005 ABC transporter RA13_RS19590 PF16884 N-terminal domain of oxidoreductase RA13_RS19590 PF00107 Zinc-binding dehydrogenase RA13_RS19595 PF00271 Helicase conserved C-terminal domain RA13_RS19595 PF00270 DEAD/DEAH box helicase RA13_RS19600 PF00005 ABC transporter RA13_RS19600 PF12848 ABC transporter RA13_RS19605 PF13302 Acetyltransferase (GNAT) domain RA13_RS19610 PF07690 Major Facilitator Superfamily RA13_RS19615 PF13411 MerR HTH family regulatory protein RA13_RS19620 PF12848 ABC transporter RA13_RS19620 PF16326 ABC transporter C-terminal domain RA13_RS19620 PF00005 ABC transporter RA13_RS19625 PF00535 Glycosyl transferase family 2 RA13_RS19630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RA13_RS19635 PF00171 Aldehyde dehydrogenase family RA13_RS19640 PF13520 Amino acid permease RA13_RS19645 PF07690 Major Facilitator Superfamily RA13_RS19650 PF03407 Nucleotide-diphospho-sugar transferase RA13_RS19655 PF00535 Glycosyl transferase family 2 RA13_RS19660 PF03407 Nucleotide-diphospho-sugar transferase RA13_RS19665 PF16363 GDP-mannose 4,6 dehydratase RA13_RS19670 PF00483 Nucleotidyl transferase RA13_RS19675 PF00884 Sulfatase RA13_RS19685 PF00005 ABC transporter RA13_RS19700 PF00258 Flavodoxin RA13_RS19700 PF00067 Cytochrome P450 RA13_RS19700 PF00667 FAD binding domain RA13_RS19700 PF00175 Oxidoreductase NAD-binding domain RA13_RS19705 PF13037 Domain of unknown function (DUF3898) RA13_RS19705 PF13039 Protein of unknown function (DUF3900) RA13_RS19710 PF01027 Inhibitor of apoptosis-promoting Bax1 RA13_RS19715 PF01687 Riboflavin kinase RA13_RS19720 PF10055 Uncharacterized small protein (DUF2292) RA13_RS19725 PF01740 STAS domain RA13_RS19725 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain RA13_RS19730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RA13_RS19735 PF03992 Antibiotic biosynthesis monooxygenase RA13_RS19740 PF04239 Protein of unknown function (DUF421) RA13_RS19745 PF02056 Family 4 glycosyl hydrolase RA13_RS19745 PF11975 Family 4 glycosyl hydrolase C-terminal domain RA13_RS19750 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS19755 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS19760 PF01547 Bacterial extracellular solute-binding protein RA13_RS19770 PF02449 Beta-galactosidase RA13_RS19770 PF08533 Beta-galactosidase C-terminal domain RA13_RS19770 PF08532 Beta-galactosidase trimerisation domain RA13_RS19775 PF00657 GDSL-like Lipase/Acylhydrolase RA13_RS19780 PF00248 Aldo/keto reductase family RA13_RS19785 PF18370 Rhamnogalacturonan I lyases beta-sheet domain RA13_RS19785 PF01839 FG-GAP repeat RA13_RS19790 PF18370 Rhamnogalacturonan I lyases beta-sheet domain RA13_RS19795 PF04854 Protein of unknown function, DUF624 RA13_RS19800 PF09224 Domain of unknown function (DUF1961) RA13_RS19805 PF13472 GDSL-like Lipase/Acylhydrolase family RA13_RS19810 PF12833 Helix-turn-helix domain RA13_RS19815 PF07470 Glycosyl Hydrolase Family 88 RA13_RS19825 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS19830 PF13416 Bacterial extracellular solute-binding protein RA13_RS19835 PF00072 Response regulator receiver domain RA13_RS19835 PF12833 Helix-turn-helix domain RA13_RS19845 PF04854 Protein of unknown function, DUF624 RA13_RS19855 PF00583 Acetyltransferase (GNAT) family RA13_RS19860 PF05067 Manganese containing catalase RA13_RS19865 PF12652 CotJB protein RA13_RS19870 PF11007 Spore coat associated protein JA (CotJA) RA13_RS19880 PF01709 Transcriptional regulator RA13_RS19885 PF13176 Tetratricopeptide repeat RA13_RS19885 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS19895 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH RA13_RS19895 PF04740 LXG domain of WXG superfamily RA13_RS19910 PF13181 Tetratricopeptide repeat RA13_RS19910 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS19945 PF01938 TRAM domain RA13_RS19945 PF05958 tRNA (Uracil-5-)-methyltransferase RA13_RS19950 PF00781 Diacylglycerol kinase catalytic domain RA13_RS19955 PF00873 AcrB/AcrD/AcrF family RA13_RS19960 PF00440 Bacterial regulatory proteins, tetR family RA13_RS19965 PF02934 GatB/GatE catalytic domain RA13_RS19965 PF02637 GatB domain RA13_RS19970 PF01425 Amidase RA13_RS19975 PF02686 Glu-tRNAGln amidotransferase C subunit RA13_RS19980 PF00474 Sodium:solute symporter family RA13_RS19985 PF02308 MgtC family RA13_RS19990 PF01636 Phosphotransferase enzyme family RA13_RS20000 PF00533 BRCA1 C Terminus (BRCT) domain RA13_RS20000 PF01653 NAD-dependent DNA ligase adenylation domain RA13_RS20000 PF03120 NAD-dependent DNA ligase OB-fold domain RA13_RS20000 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RA13_RS20000 PF12826 Helix-hairpin-helix motif RA13_RS20005 PF00580 UvrD/REP helicase N-terminal domain RA13_RS20005 PF13361 UvrD-like helicase C-terminal domain RA13_RS20010 PF01884 PcrB family RA13_RS20015 PF01645 Conserved region in glutamate synthase RA13_RS20020 PF01371 Trp repressor protein RA13_RS20025 PF17479 Protein of unknown function (DUF3048) C-terminal domain RA13_RS20025 PF11258 Protein of unknown function (DUF3048) N-terminal domain RA13_RS20030 PF13382 Adenine deaminase C-terminal domain RA13_RS20030 PF01979 Amidohydrolase family RA13_RS20035 PF11127 Protein of unknown function (DUF2892) RA13_RS20040 PF13520 Amino acid permease RA13_RS20045 PF01037 Lrp/AsnC ligand binding domain RA13_RS20050 PF02843 Phosphoribosylglycinamide synthetase, C domain RA13_RS20050 PF02844 Phosphoribosylglycinamide synthetase, N domain RA13_RS20050 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RA13_RS20055 PF02142 MGS-like domain RA13_RS20055 PF01808 AICARFT/IMPCHase bienzyme RA13_RS20060 PF00551 Formyl transferase RA13_RS20065 PF00586 AIR synthase related protein, N-terminal domain RA13_RS20065 PF02769 AIR synthase related protein, C-terminal domain RA13_RS20070 PF00156 Phosphoribosyl transferase domain RA13_RS20075 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RA13_RS20075 PF00586 AIR synthase related protein, N-terminal domain RA13_RS20075 PF02769 AIR synthase related protein, C-terminal domain RA13_RS20085 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RA13_RS20090 PF01259 SAICAR synthetase RA13_RS20095 PF00206 Lyase RA13_RS20095 PF10397 Adenylosuccinate lyase C-terminus RA13_RS20100 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RA13_RS20100 PF02222 ATP-grasp domain RA13_RS20105 PF00731 AIR carboxylase RA13_RS20110 PF14044 NETI protein RA13_RS20115 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RA13_RS20130 PF00860 Permease family RA13_RS20145 PF00958 GMP synthase C terminal domain RA13_RS20145 PF00117 Glutamine amidotransferase class-I RA13_RS20145 PF02540 NAD synthase RA13_RS20150 PF13559 Domain of unknown function (DUF4129) RA13_RS20150 PF01841 Transglutaminase-like superfamily RA13_RS20150 PF11992 Domain of unknown function (DUF3488) RA13_RS20155 PF01882 Protein of unknown function DUF58 RA13_RS20160 PF07726 ATPase family associated with various cellular activities (AAA) RA13_RS20160 PF17863 AAA lid domain RA13_RS20165 PF01545 Cation efflux family RA13_RS20165 PF16916 Dimerisation domain of Zinc Transporter RA13_RS20175 PF00324 Amino acid permease RA13_RS20180 PF07732 Multicopper oxidase RA13_RS20180 PF00394 Multicopper oxidase RA13_RS20180 PF07731 Multicopper oxidase RA13_RS20185 PF13170 Protein of unknown function (DUF4003) RA13_RS20190 PF12697 Alpha/beta hydrolase family RA13_RS20195 PF14169 Cold-inducible protein YdjO RA13_RS20205 PF03330 Lytic transglycolase RA13_RS20210 PF00107 Zinc-binding dehydrogenase RA13_RS20210 PF08240 Alcohol dehydrogenase GroES-like domain RA13_RS20215 PF00083 Sugar (and other) transporter RA13_RS20220 PF01047 MarR family RA13_RS20225 PF00881 Nitroreductase family RA13_RS20235 PF04542 Sigma-70 region 2 RA13_RS20235 PF08281 Sigma-70, region 4 RA13_RS20240 PF11738 Protein of unknown function (DUF3298) RA13_RS20240 PF13739 Deacetylase PdaC RA13_RS20245 PF13421 SPFH domain-Band 7 family RA13_RS20250 PF04536 TPM domain RA13_RS20255 PF08271 TFIIB zinc-binding RA13_RS20260 PF04012 PspA/IM30 family RA13_RS20265 PF00294 pfkB family carbohydrate kinase RA13_RS20275 PF08240 Alcohol dehydrogenase GroES-like domain RA13_RS20275 PF00107 Zinc-binding dehydrogenase RA13_RS20280 PF00931 NB-ARC domain RA13_RS20280 PF13176 Tetratricopeptide repeat RA13_RS20290 PF00144 Beta-lactamase RA13_RS20300 PF00196 Bacterial regulatory proteins, luxR family RA13_RS20300 PF00072 Response regulator receiver domain RA13_RS20310 PF00118 TCP-1/cpn60 chaperonin family RA13_RS20315 PF00166 Chaperonin 10 Kd subunit RA13_RS20320 PF02517 CPBP intramembrane metalloprotease RA13_RS20325 PF14146 Domain of unknown function (DUF4305) RA13_RS20330 PF00902 Sec-independent protein translocase protein (TatC) RA13_RS20335 PF02416 mttA/Hcf106 family RA13_RS20340 PF02629 CoA binding domain RA13_RS20340 PF06971 Putative DNA-binding protein N-terminus RA13_RS20345 PF01967 MoaC family RA13_RS20350 PF16326 ABC transporter C-terminal domain RA13_RS20350 PF12848 ABC transporter RA13_RS20350 PF00005 ABC transporter RA13_RS20355 PF00814 Glycoprotease family RA13_RS20360 PF00583 Acetyltransferase (GNAT) family RA13_RS20365 PF00814 Glycoprotease family RA13_RS20370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RA13_RS20375 PF02769 AIR synthase related protein, C-terminal domain RA13_RS20375 PF00586 AIR synthase related protein, N-terminal domain RA13_RS20415 PF11495 Archaeal transcriptional regulator TrmB RA13_RS20415 PF01978 Sugar-specific transcriptional regulator TrmB RA13_RS20430 PF07690 Major Facilitator Superfamily RA13_RS20435 PF00392 Bacterial regulatory proteins, gntR family RA13_RS20435 PF07729 FCD domain RA13_RS20440 PF07690 Major Facilitator Superfamily RA13_RS20455 PF13302 Acetyltransferase (GNAT) domain RA13_RS20460 PF12708 Pectate lyase superfamily protein RA13_RS20460 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain RA13_RS20465 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS20470 PF00005 ABC transporter RA13_RS20470 PF00571 CBS domain RA13_RS20480 PF11553 Protein of unknown function (DUF3231) RA13_RS20485 PF00245 Alkaline phosphatase RA13_RS20490 PF11611 Domain of unknown function (DUF4352) RA13_RS20490 PF08139 Prokaryotic membrane lipoprotein lipid attachment site RA13_RS20500 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RA13_RS20505 PF00704 Glycosyl hydrolases family 18 RA13_RS20505 PF01476 LysM domain RA13_RS20510 PF00465 Iron-containing alcohol dehydrogenase RA13_RS20515 PF07690 Major Facilitator Superfamily RA13_RS20525 PF00905 Penicillin binding protein transpeptidase domain RA13_RS20540 PF00561 alpha/beta hydrolase fold RA13_RS20545 PF00005 ABC transporter RA13_RS20545 PF12848 ABC transporter RA13_RS20555 PF01037 Lrp/AsnC ligand binding domain RA13_RS20560 PF12706 Beta-lactamase superfamily domain RA13_RS20580 PF01238 Phosphomannose isomerase type I RA13_RS20585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RA13_RS20585 PF02378 Phosphotransferase system, EIIC RA13_RS20585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RA13_RS20590 PF08279 HTH domain RA13_RS20590 PF05043 Mga helix-turn-helix domain RA13_RS20590 PF00874 PRD domain RA13_RS20590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RA13_RS20595 PF03176 MMPL family RA13_RS20600 PF01047 MarR family RA13_RS20610 PF00474 Sodium:solute symporter family RA13_RS20620 PF01451 Low molecular weight phosphotyrosine protein phosphatase RA13_RS20625 PF02040 Arsenical pump membrane protein RA13_RS20630 PF01022 Bacterial regulatory protein, arsR family RA13_RS20635 PF01022 Bacterial regulatory protein, arsR family RA13_RS20640 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RA13_RS20640 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RA13_RS20645 PF00155 Aminotransferase class I and II RA13_RS20645 PF00392 Bacterial regulatory proteins, gntR family RA13_RS20650 PF00892 EamA-like transporter family RA13_RS20665 PF07690 Major Facilitator Superfamily RA13_RS20670 PF02567 Phenazine biosynthesis-like protein RA13_RS20685 PF00892 EamA-like transporter family RA13_RS20690 PF00583 Acetyltransferase (GNAT) family RA13_RS20695 PF01047 MarR family RA13_RS20705 PF04237 YjbR RA13_RS20710 PF02559 CarD-like/TRCF domain RA13_RS20715 PF00313 'Cold-shock' DNA-binding domain RA13_RS20725 PF00487 Fatty acid desaturase RA13_RS20730 PF00083 Sugar (and other) transporter RA13_RS20730 PF07690 Major Facilitator Superfamily RA13_RS20735 PF12706 Beta-lactamase superfamily domain RA13_RS20750 PF01037 Lrp/AsnC ligand binding domain RA13_RS20765 PF00486 Transcriptional regulatory protein, C terminal RA13_RS20765 PF00072 Response regulator receiver domain RA13_RS20770 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS20770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS20780 PF01522 Polysaccharide deacetylase RA13_RS20820 PF17763 Glutaminase/Asparaginase C-terminal domain RA13_RS20820 PF00710 Asparaginase, N-terminal RA13_RS20825 PF00291 Pyridoxal-phosphate dependent enzyme RA13_RS20830 PF01042 Endoribonuclease L-PSP RA13_RS20900 PF10263 SprT-like family RA13_RS20900 PF17283 SprT-like zinc ribbon domain RA13_RS20910 PF09371 Tex-like protein N-terminal domain RA13_RS20910 PF00575 S1 RNA binding domain RA13_RS20910 PF17674 HHH domain RA13_RS20910 PF16921 Tex protein YqgF-like domain RA13_RS20915 PF07228 Stage II sporulation protein E (SpoIIE) RA13_RS20920 PF04539 Sigma-70 region 3 RA13_RS20920 PF04545 Sigma-70, region 4 RA13_RS20920 PF04542 Sigma-70 region 2 RA13_RS20925 PF13581 Histidine kinase-like ATPase domain RA13_RS20930 PF01740 STAS domain RA13_RS20935 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain RA13_RS20935 PF07228 Stage II sporulation protein E (SpoIIE) RA13_RS20940 PF13581 Histidine kinase-like ATPase domain RA13_RS20945 PF01740 STAS domain RA13_RS20950 PF01740 STAS domain RA13_RS20950 PF08678 Rsbr N terminal RA13_RS20955 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RA13_RS20960 PF01402 Ribbon-helix-helix protein, copG family RA13_RS20965 PF01168 Alanine racemase, N-terminal domain RA13_RS20965 PF00842 Alanine racemase, C-terminal domain RA13_RS20975 PF01648 4'-phosphopantetheinyl transferase superfamily RA13_RS20980 PF01694 Rhomboid family RA13_RS20985 PF03703 Bacterial PH domain RA13_RS20990 PF03703 Bacterial PH domain RA13_RS20995 PF00270 DEAD/DEAH box helicase RA13_RS20995 PF00271 Helicase conserved C-terminal domain RA13_RS21005 PF01225 Mur ligase family, catalytic domain RA13_RS21005 PF08245 Mur ligase middle domain RA13_RS21005 PF02875 Mur ligase family, glutamate ligase domain RA13_RS21010 PF01820 D-ala D-ala ligase N-terminus RA13_RS21010 PF07478 D-ala D-ala ligase C-terminus RA13_RS21015 PF00085 Thioredoxin RA13_RS21020 PF16916 Dimerisation domain of Zinc Transporter RA13_RS21020 PF01545 Cation efflux family RA13_RS21030 PF13040 Fur-regulated basic protein B RA13_RS21035 PF02770 Acyl-CoA dehydrogenase, middle domain RA13_RS21035 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RA13_RS21035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RA13_RS21050 PF00005 ABC transporter RA13_RS21055 PF01594 AI-2E family transporter RA13_RS21060 PF00375 Sodium:dicarboxylate symporter family RA13_RS21065 PF08279 HTH domain RA13_RS21065 PF00072 Response regulator receiver domain RA13_RS21070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS21070 PF17203 Single cache domain 3 RA13_RS21070 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RA13_RS21075 PF03480 Bacterial extracellular solute-binding protein, family 7 RA13_RS21080 PF05067 Manganese containing catalase RA13_RS21090 PF07883 Cupin domain RA13_RS21095 PF10685 Stress-induced bacterial acidophilic repeat motif RA13_RS21095 PF00477 Small hydrophilic plant seed protein RA13_RS21100 PF12787 EcsC protein family RA13_RS21105 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) RA13_RS21110 PF04226 Transglycosylase associated protein RA13_RS21115 PF01566 Natural resistance-associated macrophage protein RA13_RS21145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RA13_RS21145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RA13_RS21145 PF00205 Thiamine pyrophosphate enzyme, central domain RA13_RS21155 PF13520 Amino acid permease RA13_RS21160 PF03170 Bacterial cellulose synthase subunit RA13_RS21170 PF00990 Diguanylate cyclase, GGDEF domain RA13_RS21185 PF01037 Lrp/AsnC ligand binding domain RA13_RS21200 PF12823 Domain of unknown function (DUF3817) RA13_RS21205 PF10997 Alternate to MurJ RA13_RS21215 PF16242 Pyridoxamine 5'-phosphate oxidase like RA13_RS21235 PF13193 AMP-binding enzyme C-terminal domain RA13_RS21235 PF00501 AMP-binding enzyme RA13_RS21240 PF05043 Mga helix-turn-helix domain RA13_RS21240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RA13_RS21240 PF00874 PRD domain RA13_RS21240 PF08279 HTH domain RA13_RS21240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RA13_RS21245 PF00248 Aldo/keto reductase family RA13_RS21250 PF00905 Penicillin binding protein transpeptidase domain RA13_RS21250 PF03717 Penicillin-binding Protein dimerisation domain RA13_RS21250 PF05223 NTF2-like N-terminal transpeptidase domain RA13_RS21255 PF03992 Antibiotic biosynthesis monooxygenase RA13_RS21260 PF13129 Protein of unknown function (DUF3953) RA13_RS21270 PF09339 IclR helix-turn-helix domain RA13_RS21270 PF01614 Bacterial transcriptional regulator RA13_RS21275 PF02626 Carboxyltransferase domain, subdomain A and B RA13_RS21280 PF02682 Carboxyltransferase domain, subdomain C and D RA13_RS21285 PF07286 Protein of unknown function (DUF1445) RA13_RS21290 PF01566 Natural resistance-associated macrophage protein RA13_RS21295 PF03746 LamB/YcsF family RA13_RS21315 PF07977 FabA-like domain RA13_RS21320 PF01738 Dienelactone hydrolase family RA13_RS21325 PF08125 Mannitol dehydrogenase C-terminal domain RA13_RS21325 PF01232 Mannitol dehydrogenase Rossmann domain RA13_RS21330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RA13_RS21335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RA13_RS21335 PF02378 Phosphotransferase system, EIIC RA13_RS21345 PF08220 DeoR-like helix-turn-helix domain RA13_RS21345 PF05573 NosL RA13_RS21350 PF04234 CopC domain RA13_RS21350 PF05425 Copper resistance protein D RA13_RS21350 PF13115 YtkA-like RA13_RS21355 PF07987 Domain of unkown function (DUF1775) RA13_RS21365 PF06800 Sugar transport protein RA13_RS21370 PF00171 Aldehyde dehydrogenase family RA13_RS21375 PF00202 Aminotransferase class-III RA13_RS21380 PF00392 Bacterial regulatory proteins, gntR family RA13_RS21380 PF00155 Aminotransferase class I and II RA13_RS21385 PF01022 Bacterial regulatory protein, arsR family RA13_RS21390 PF03992 Antibiotic biosynthesis monooxygenase RA13_RS21395 PF00881 Nitroreductase family RA13_RS21400 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS21405 PF00440 Bacterial regulatory proteins, tetR family RA13_RS21410 PF07690 Major Facilitator Superfamily RA13_RS21415 PF01497 Periplasmic binding protein RA13_RS21420 PF00005 ABC transporter RA13_RS21425 PF01032 FecCD transport family RA13_RS21430 PF01032 FecCD transport family RA13_RS21435 PF00696 Amino acid kinase family RA13_RS21435 PF13840 ACT domain RA13_RS21440 PF09680 Family of unknown function RA13_RS21445 PF09680 Family of unknown function RA13_RS21450 PF11131 Rap-phr extracellular signalling RA13_RS21455 PF18801 response regulator aspartate phosphatase H, N terminal RA13_RS21460 PF00512 His Kinase A (phospho-acceptor) domain RA13_RS21460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RA13_RS21460 PF00672 HAMP domain RA13_RS21470 PF02687 FtsX-like permease family RA13_RS21470 PF12704 MacB-like periplasmic core domain RA13_RS21475 PF00005 ABC transporter RA13_RS21480 PF03972 MmgE/PrpD family RA13_RS21485 PF07687 Peptidase dimerisation domain RA13_RS21485 PF01546 Peptidase family M20/M25/M40 RA13_RS21490 PF00005 ABC transporter RA13_RS21495 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS21500 PF00497 Bacterial extracellular solute-binding proteins, family 3 RA13_RS21505 PF00583 Acetyltransferase (GNAT) family RA13_RS21510 PF00296 Luciferase-like monooxygenase RA13_RS21515 PF03845 Spore germination protein RA13_RS21520 PF05504 Spore germination B3/ GerAC like, C-terminal RA13_RS21535 PF12708 Pectate lyase superfamily protein RA13_RS21535 PF13229 Right handed beta helix region RA13_RS21540 PF00854 POT family RA13_RS21545 PF00561 alpha/beta hydrolase fold RA13_RS21560 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RA13_RS21565 PF02441 Flavoprotein RA13_RS21570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RA13_RS21570 PF03466 LysR substrate binding domain RA13_RS21575 PF00497 Bacterial extracellular solute-binding proteins, family 3 RA13_RS21585 PF00005 ABC transporter RA13_RS21595 PF01648 4'-phosphopantetheinyl transferase superfamily RA13_RS21600 PF00392 Bacterial regulatory proteins, gntR family RA13_RS21600 PF00155 Aminotransferase class I and II RA13_RS21605 PF00892 EamA-like transporter family RA13_RS21615 PF00975 Thioesterase domain RA13_RS21620 PF13193 AMP-binding enzyme C-terminal domain RA13_RS21620 PF00975 Thioesterase domain RA13_RS21620 PF00550 Phosphopantetheine attachment site RA13_RS21620 PF00668 Condensation domain RA13_RS21620 PF00501 AMP-binding enzyme RA13_RS21625 PF13193 AMP-binding enzyme C-terminal domain RA13_RS21625 PF00550 Phosphopantetheine attachment site RA13_RS21625 PF00668 Condensation domain RA13_RS21625 PF00501 AMP-binding enzyme RA13_RS21630 PF00550 Phosphopantetheine attachment site RA13_RS21630 PF00501 AMP-binding enzyme RA13_RS21630 PF13193 AMP-binding enzyme C-terminal domain RA13_RS21630 PF00668 Condensation domain RA13_RS21635 PF01638 HxlR-like helix-turn-helix RA13_RS21640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RA13_RS21645 PF01380 SIS domain RA13_RS21650 PF17202 Single cache domain 3 RA13_RS21650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RA13_RS21650 PF00672 HAMP domain RA13_RS21655 PF14040 Deoxyribonuclease NucA/NucB RA13_RS21665 PF00232 Glycosyl hydrolase family 1 RA13_RS21675 PF10925 Protein of unknown function (DUF2680) RA13_RS21680 PF06271 RDD family RA13_RS21690 PF00497 Bacterial extracellular solute-binding proteins, family 3 RA13_RS21695 PF00528 Binding-protein-dependent transport system inner membrane component RA13_RS21700 PF02492 CobW/HypB/UreG, nucleotide-binding domain RA13_RS21700 PF07683 Cobalamin synthesis protein cobW C-terminal domain RA13_RS21705 PF03734 L,D-transpeptidase catalytic domain RA13_RS21710 PF02649 Type I GTP cyclohydrolase folE2 RA13_RS21715 PF07690 Major Facilitator Superfamily RA13_RS21720 PF18267 Rubredoxin NAD+ reductase C-terminal domain RA13_RS21720 PF07992 Pyridine nucleotide-disulphide oxidoreductase RA13_RS21720 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RA13_RS21720 PF04324 BFD-like [2Fe-2S] binding domain RA13_RS21725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RA13_RS21725 PF00384 Molybdopterin oxidoreductase RA13_RS21725 PF01568 Molydopterin dinucleotide binding domain RA13_RS21730 PF18267 Rubredoxin NAD+ reductase C-terminal domain RA13_RS21730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RA13_RS21730 PF07992 Pyridine nucleotide-disulphide oxidoreductase RA13_RS21730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RA13_RS21730 PF04324 BFD-like [2Fe-2S] binding domain RA13_RS21735 PF00355 Rieske [2Fe-2S] domain RA13_RS21740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RA13_RS21755 PF03773 Predicted permease RA13_RS21760 PF09323 Domain of unknown function (DUF1980) RA13_RS21765 PF13556 PucR C-terminal helix-turn-helix domain RA13_RS21765 PF17853 GGDEF-like domain RA13_RS21770 PF00474 Sodium:solute symporter family RA13_RS21775 PF00171 Aldehyde dehydrogenase family RA13_RS21785 PF10127 RNA repair pathway DNA polymerase beta family RA13_RS21790 PF05448 Acetyl xylan esterase (AXE1) RA13_RS21800 PF01202 Shikimate kinase RA13_RS21805 PF01261 Xylose isomerase-like TIM barrel RA13_RS21815 PF02540 NAD synthase RA13_RS21820 PF09347 Domain of unknown function (DUF1989) RA13_RS21825 PF00324 Amino acid permease RA13_RS21830 PF08892 YqcI/YcgG family RA13_RS21835 PF01810 LysE type translocator RA13_RS21840 PF01047 MarR family RA13_RS21845 PF07690 Major Facilitator Superfamily RA13_RS21850 PF02652 L-lactate permease RA13_RS21855 PF00056 lactate/malate dehydrogenase, NAD binding domain RA13_RS21855 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain