locus-tag	class	description
CY96_RS00020	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CY96_RS00025	COG4856	YbbR-like protein
CY96_RS00065	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS00070	COG2011	ABC-type metal ion transport system permease component
CY96_RS00075	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CY96_RS00080	COG1464	Belongs to the NlpA lipoprotein family
CY96_RS00085	COG0604	alcohol dehydrogenase
CY96_RS00095	COG0277	FAD linked oxidase domain protein
CY96_RS00100	COG2271	Major facilitator Superfamily
CY96_RS00110	COG2814	Major facilitator Superfamily
CY96_RS00130	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CY96_RS00135	COG0444	Belongs to the ABC transporter superfamily
CY96_RS00140	COG4608	Belongs to the ABC transporter superfamily
CY96_RS00145	COG4166	transmembrane transport
CY96_RS00155	COG2207	Transcriptional regulator
CY96_RS00170	COG4166	transmembrane transport
CY96_RS00175	COG4166	transmembrane transport
CY96_RS00180	COG0656	L-ascorbic acid biosynthetic process
CY96_RS00195	COG4149	molybdate abc transporter
CY96_RS00200	COG0725	ABC transporter, periplasmic molybdate-binding protein
CY96_RS00205	COG1910	domain protein
CY96_RS00225	COG0697	spore germination
CY96_RS00240	COG0204	Acyl-transferase
CY96_RS00250	COG1609	Transcriptional regulator
CY96_RS00260	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CY96_RS00285	COG5298	Protein conserved in bacteria
CY96_RS00310	COG0488	(ABC) transporter
CY96_RS00320	COG0747	negative chemotaxis
CY96_RS00325	COG0601	transmembrane transport
CY96_RS00330	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CY96_RS00335	COG0444	Belongs to the ABC transporter superfamily
CY96_RS00340	COG4608	Belongs to the ABC transporter superfamily
CY96_RS00345	COG0561	phosphatase activity
CY96_RS00380	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CY96_RS00385	COG0179	Fumarylacetoacetate (FAA) hydrolase
CY96_RS00395	COG0531	amino acid
CY96_RS00400	COG2814	Major facilitator Superfamily
CY96_RS00410	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CY96_RS00420	COG4294	response to UV
CY96_RS00425	COG0705	Rhomboid family
CY96_RS00435	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CY96_RS00440	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CY96_RS00445	COG0864	Transcriptional regulator
CY96_RS00450	COG2337	Toxic component of a toxin-antitoxin (TA) module
CY96_RS00455	COG2183	response to ionizing radiation
CY96_RS00555	COG0802	atpase or kinase
CY96_RS00560	COG1214	PFAM Peptidase M22, glycoprotease
CY96_RS00565	COG0456	acetyltransferase
CY96_RS00575	COG0488	(ABC) transporter
CY96_RS00590	COG1266	CAAX protease self-immunity
CY96_RS00610	COG2252	PERMEase
CY96_RS00620	COG5002	protein histidine kinase activity
CY96_RS00645	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CY96_RS00685	COG2205	protein histidine kinase activity
CY96_RS00690	COG0745	RESPONSE REGULATOR receiver
CY96_RS00725	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CY96_RS00735	COG1216	Glycosyl transferase, family 2
CY96_RS00735	COG0463	Glycosyl transferase, family 2
CY96_RS00755	COG0697	spore germination
CY96_RS00785	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CY96_RS00790	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CY96_RS00795	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CY96_RS00805	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CY96_RS00820	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CY96_RS00830	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CY96_RS00840	COG0151	Belongs to the GarS family
CY96_RS00870	COG0210	DNA helicase
CY96_RS00880	COG4851	CamS sex pheromone cAM373 precursor
CY96_RS00895	COG1335	isochorismatase
CY96_RS00905	COG2011	ABC-type metal ion transport system permease component
CY96_RS00910	COG1464	Belongs to the NlpA lipoprotein family
CY96_RS00925	COG0003	Pfam Anion-transporting ATPase
CY96_RS00930	COG1846	Transcriptional regulator
CY96_RS00935	COG4682	membrane
CY96_RS00955	COG1597	lipid kinase activity
CY96_RS00965	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CY96_RS00975	COG1012	belongs to the aldehyde dehydrogenase family
CY96_RS00980	COG2076	Multidrug Resistance protein
CY96_RS00990	COG2309	aminopeptidase activity
CY96_RS01005	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CY96_RS01015	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CY96_RS01020	COG4807	Protein conserved in bacteria
CY96_RS01045	COG1757	Na H antiporter
CY96_RS01050	COG1473	amidohydrolase
CY96_RS01065	COG0450	alkyl hydroperoxide reductase
CY96_RS01085	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CY96_RS01090	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CY96_RS01095	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CY96_RS01105	COG0492	ferredoxin-NADP+ reductase activity
CY96_RS01120	COG0166	Belongs to the GPI family
CY96_RS01145	COG5002	protein histidine kinase activity
CY96_RS01165	COG3541	Predicted nucleotidyltransferase
CY96_RS01170	COG2814	Major facilitator Superfamily
CY96_RS01175	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CY96_RS01175	COG0723	plastoquinol--plastocyanin reductase activity
CY96_RS01185	COG0765	amino acid transport
CY96_RS01190	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CY96_RS01200	COG0840	transmembrane signaling receptor activity
CY96_RS01225	COG0549	Belongs to the carbamate kinase family
CY96_RS01230	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CY96_RS01245	COG0366	Alpha amylase catalytic
CY96_RS01250	COG1263	PTS System
CY96_RS01250	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CY96_RS01250	COG2190	(PTS) system
CY96_RS01280	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CY96_RS01300	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CY96_RS01305	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CY96_RS01310	COG1116	anion transmembrane transporter activity
CY96_RS01355	COG2270	Major facilitator Superfamily
CY96_RS01385	COG2310	stress, protein
CY96_RS01390	COG2310	stress, protein
CY96_RS01395	COG2310	stress, protein
CY96_RS01400	COG0861	Integral membrane protein TerC family
CY96_RS01410	COG3853	Toxic anion resistance protein (TelA)
CY96_RS01425	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CY96_RS01435	COG1295	ribonuclease BN
CY96_RS01445	COG2217	Heavy metal translocating P-type atpase
CY96_RS01450	COG0697	spore germination
CY96_RS01460	COG0681	Belongs to the peptidase S26 family
CY96_RS01470	COG0586	Pfam SNARE associated Golgi protein
CY96_RS01485	COG3871	stress protein (general stress protein 26)
CY96_RS01490	COG0387	Pfam Sodium calcium exchanger
CY96_RS01500	COG0535	radical SAM domain protein
CY96_RS01520	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CY96_RS01525	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CY96_RS01540	COG3829	transcription factor binding
CY96_RS01550	COG0833	amino acid
CY96_RS01555	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CY96_RS01590	COG1263	PTS System
CY96_RS01590	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CY96_RS01595	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CY96_RS01610	COG0463	Glycosyl transferase, family 2
CY96_RS01620	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CY96_RS01620	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CY96_RS01640	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CY96_RS01660	COG1228	amidohydrolase
CY96_RS01665	COG1090	epimerase
CY96_RS01695	COG1988	membrane-bound metal-dependent
CY96_RS01700	COG1194	a g-specific adenine glycosylase
CY96_RS01725	COG1132	(ABC) transporter
CY96_RS01730	COG4129	membrane
CY96_RS01735	COG0069	glutamate synthase activity
CY96_RS01735	COG0070	glutamate synthase
CY96_RS01735	COG0067	glutamate synthase
CY96_RS01745	COG4555	ABC transporter
CY96_RS01765	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CY96_RS01770	COG0735	belongs to the Fur family
CY96_RS01885	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CY96_RS01910	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CY96_RS01915	COG5001	Diguanylate cyclase
CY96_RS01915	COG1716	ATPase activity
CY96_RS01925	COG2766	serine protein kinase
CY96_RS01950	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CY96_RS01960	COG1585	Membrane protein implicated in regulation of membrane protease activity
CY96_RS01965	COG2268	Band 7 protein
CY96_RS01975	COG3290	protein histidine kinase activity
CY96_RS01980	COG4565	transcriptional regulatory protein
CY96_RS01985	COG2851	Citrate transporter
CY96_RS02010	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CY96_RS02015	COG3842	ATPase activity
CY96_RS02020	COG1175	transmembrane transport
CY96_RS02025	COG0395	ABC-type sugar transport system, permease component
CY96_RS02035	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CY96_RS02040	COG0745	RESPONSE REGULATOR receiver
CY96_RS02045	COG5002	protein histidine kinase activity
CY96_RS02055	COG4990	cell redox homeostasis
CY96_RS02065	COG3290	protein histidine kinase activity
CY96_RS02070	COG4565	transcriptional regulatory protein
CY96_RS02075	COG3493	citrate carrier protein
CY96_RS02080	COG0281	malic enzyme
CY96_RS02090	COG0697	spore germination
CY96_RS02095	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS02105	COG5002	protein histidine kinase activity
CY96_RS02110	COG0745	RESPONSE REGULATOR receiver
CY96_RS02120	COG0454	-acetyltransferase
CY96_RS02120	COG0456	acetyltransferase
CY96_RS02125	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CY96_RS02130	COG3383	formate dehydrogenase (NAD+) activity
CY96_RS02135	COG2427	Protein of unknown function (DUF1641)
CY96_RS02150	COG0531	amino acid
CY96_RS02160	COG0640	Transcriptional regulator
CY96_RS02165	COG2217	Heavy metal translocating P-type atpase
CY96_RS02170	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CY96_RS02180	COG3227	Zinc metalloprotease (Elastase)
CY96_RS02200	COG2720	vancomycin resistance protein
CY96_RS02205	COG1316	TRANSCRIPTIONal
CY96_RS02210	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CY96_RS02215	COG0346	lactoylglutathione lyase activity
CY96_RS02220	COG1253	flavin adenine dinucleotide binding
CY96_RS02225	COG1027	Aspartate ammonia-lyase
CY96_RS02230	COG1620	l-lactate permease
CY96_RS02245	COG3104	oligopeptide transport
CY96_RS02250	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CY96_RS02255	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CY96_RS02260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CY96_RS02270	COG2226	methyltransferase
CY96_RS02280	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CY96_RS02290	COG4548	von Willebrand factor, type A
CY96_RS02295	COG0714	Associated with various cellular activities
CY96_RS02315	COG0531	amino acid
CY96_RS02320	COG2188	Transcriptional regulator
CY96_RS02325	COG1263	PTS System
CY96_RS02325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CY96_RS02330	COG0366	Alpha amylase catalytic
CY96_RS02345	COG0697	spore germination
CY96_RS02350	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CY96_RS02355	COG1115	amino acid carrier protein
CY96_RS02365	COG1126	abc transporter atp-binding protein
CY96_RS02370	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CY96_RS02375	COG0765	amino acid transport
CY96_RS02380	COG0765	amino acid transport
CY96_RS02385	COG0833	amino acid
CY96_RS02400	COG2378	regulation of single-species biofilm formation
CY96_RS02405	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CY96_RS02410	COG5002	protein histidine kinase activity
CY96_RS02435	COG0659	secondary active sulfate transmembrane transporter activity
CY96_RS02450	COG2271	Major facilitator Superfamily
CY96_RS02455	COG1846	Transcriptional regulator
CY96_RS02460	COG0477	Major facilitator Superfamily
CY96_RS02465	COG1609	Transcriptional regulator
CY96_RS02470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CY96_RS02485	COG1172	Belongs to the binding-protein-dependent transport system permease family
CY96_RS02490	COG1879	ABC-type sugar transport system periplasmic component
CY96_RS02515	COG1063	alcohol dehydrogenase
CY96_RS02565	COG0840	transmembrane signaling receptor activity
CY96_RS02570	COG3584	3D domain protein
CY96_RS02570	COG1388	LysM domain
CY96_RS02575	COG1476	TRANSCRIPTIONal
CY96_RS02595	COG3104	oligopeptide transport
CY96_RS02600	COG1114	Component of the transport system for branched-chain amino acids
CY96_RS02615	COG1113	amino acid transport
CY96_RS02620	COG2252	PERMEase
CY96_RS02635	COG2153	protein acetylation
CY96_RS02645	COG0569	domain protein
CY96_RS02645	COG0475	glutathione-regulated potassium exporter activity
CY96_RS02655	COG1845	cytochrome c oxidase, subunit III
CY96_RS02660	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CY96_RS02670	COG0833	amino acid
CY96_RS02675	COG4990	cell redox homeostasis
CY96_RS02690	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CY96_RS02695	COG0697	spore germination
CY96_RS02700	COG0531	amino acid
CY96_RS02715	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CY96_RS02720	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CY96_RS02725	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CY96_RS02725	COG1918	ferrous iron import across plasma membrane
CY96_RS02730	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CY96_RS02735	COG0573	inorganic phosphate transmembrane transporter activity
CY96_RS02740	COG0581	inorganic phosphate transmembrane transporter activity
CY96_RS02745	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CY96_RS02780	COG0544	peptidyl-prolyl cis-trans isomerase activity
CY96_RS02860	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CY96_RS02885	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CY96_RS02890	COG1116	anion transmembrane transporter activity
CY96_RS02895	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CY96_RS02900	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CY96_RS02905	COG0352	thiamine-phosphate diphosphorylase activity
CY96_RS02910	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CY96_RS02915	COG2104	thiamine diphosphate biosynthetic process
CY96_RS02925	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CY96_RS02930	COG0351	phosphomethylpyrimidine kinase
CY96_RS02970	COG2205	protein histidine kinase activity
CY96_RS02975	COG2814	Major facilitator Superfamily
CY96_RS02980	COG1846	Transcriptional regulator
CY96_RS03000	COG2252	PERMEase
CY96_RS03005	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS03020	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CY96_RS03025	COG1621	beta-fructofuranosidase activity
CY96_RS03030	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CY96_RS03030	COG1263	PTS System
CY96_RS03035	COG1609	Transcriptional regulator
CY96_RS03085	COG0778	Nitroreductase
CY96_RS03090	COG2719	SpoVR family
CY96_RS03100	COG3591	Belongs to the peptidase S1B family
CY96_RS03105	COG0446	pyridine nucleotide-disulphide oxidoreductase
CY96_RS03110	COG1937	Protein conserved in bacteria
CY96_RS03115	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CY96_RS03115	COG0425	Belongs to the sulfur carrier protein TusA family
CY96_RS03120	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CY96_RS03120	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS03125	COG0425	Belongs to the sulfur carrier protein TusA family
CY96_RS03130	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CY96_RS03130	COG0425	Belongs to the sulfur carrier protein TusA family
CY96_RS03140	COG2210	Belongs to the sulfur carrier protein TusA family
CY96_RS03145	COG0730	response to heat
CY96_RS03155	COG1316	TRANSCRIPTIONal
CY96_RS03160	COG0604	alcohol dehydrogenase
CY96_RS03165	COG1283	sodium-dependent phosphate transmembrane transporter activity
CY96_RS03180	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CY96_RS03180	COG3711	transcriptional antiterminator
CY96_RS03185	COG1447	Phosphotransferase system cellobiose-specific component IIA
CY96_RS03190	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CY96_RS03210	COG1388	LysM domain
CY96_RS03210	COG3584	3D domain protein
CY96_RS03215	COG0577	efflux transmembrane transporter activity
CY96_RS03220	COG1136	(ABC) transporter
CY96_RS03230	COG5522	Integral membrane protein (intg_mem_TP0381)
CY96_RS03245	COG1114	Component of the transport system for branched-chain amino acids
CY96_RS03250	COG3546	catalase activity
CY96_RS03285	COG0586	Pfam SNARE associated Golgi protein
CY96_RS03320	COG0531	amino acid
CY96_RS03325	COG0475	glutathione-regulated potassium exporter activity
CY96_RS03335	COG1737	Transcriptional regulator
CY96_RS03345	COG1263	PTS System
CY96_RS03345	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CY96_RS03355	COG2259	Doxx family
CY96_RS03375	COG1522	sequence-specific DNA binding
CY96_RS03380	COG0165	Argininosuccinate lyase
CY96_RS03380	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CY96_RS03385	COG0300	oxidoreductase activity
CY96_RS03405	COG1309	transcriptional regulator
CY96_RS03410	COG2814	Major facilitator Superfamily
CY96_RS03435	COG1136	(ABC) transporter
CY96_RS03440	COG0577	efflux transmembrane transporter activity
CY96_RS03445	COG1136	(ABC) transporter
CY96_RS03450	COG0577	efflux transmembrane transporter activity
CY96_RS03465	COG1733	regulation of RNA biosynthetic process
CY96_RS03480	COG4533	DNA binding
CY96_RS03485	COG2211	Major facilitator Superfamily
CY96_RS03495	COG0693	protein deglycase activity
CY96_RS03500	COG0753	catalase activity
CY96_RS03510	COG0531	amino acid
CY96_RS03525	COG1012	belongs to the aldehyde dehydrogenase family
CY96_RS03535	COG1132	(ABC) transporter
CY96_RS03540	COG1132	(ABC) transporter
CY96_RS03545	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CY96_RS03550	COG0765	amino acid transport
CY96_RS03555	COG1126	abc transporter atp-binding protein
CY96_RS03570	COG0189	ligase activity
CY96_RS03600	COG0028	Belongs to the TPP enzyme family
CY96_RS03605	COG3527	Alpha-acetolactate decarboxylase
CY96_RS03615	COG0561	phosphatase activity
CY96_RS03630	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CY96_RS03650	COG0659	secondary active sulfate transmembrane transporter activity
CY96_RS03655	COG2244	polysaccharide biosynthetic process
CY96_RS03675	COG1024	Enoyl-CoA hydratase
CY96_RS03695	COG1363	Peptidase, m42
CY96_RS03735	COG0601	transmembrane transport
CY96_RS03740	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CY96_RS03745	COG0444	Belongs to the ABC transporter superfamily
CY96_RS03750	COG4608	Belongs to the ABC transporter superfamily
CY96_RS03760	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS03850	COG0477	Major facilitator Superfamily
CY96_RS03855	COG3290	protein histidine kinase activity
CY96_RS03860	COG4565	transcriptional regulatory protein
CY96_RS03865	COG3181	Tripartite tricarboxylate transporter family receptor
CY96_RS03895	COG4978	Transcriptional regulator
CY96_RS03895	COG0789	Transcriptional regulator
CY96_RS03910	COG0305	Participates in initiation and elongation during chromosome replication
CY96_RS03950	COG1288	antiporter activity
CY96_RS03965	COG0477	Major facilitator Superfamily
CY96_RS03980	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS04060	COG1073	alpha beta
CY96_RS04115	COG1183	phosphatidylcholine synthase activity
CY96_RS04135	COG2376	Dihydroxyacetone kinase
CY96_RS04175	COG2373	Large extracellular alpha-helical protein
CY96_RS04235	COG1191	sigma factor activity
CY96_RS04245	COG2208	phosphoserine phosphatase activity
CY96_RS04250	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CY96_RS04255	COG0784	Response regulator, receiver
CY96_RS04255	COG5002	protein histidine kinase activity
CY96_RS04255	COG2205	protein histidine kinase activity
CY96_RS04295	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CY96_RS04315	COG0420	3'-5' exonuclease activity
CY96_RS04320	COG4717	serine-type aminopeptidase activity
CY96_RS04330	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CY96_RS04345	COG0346	lactoylglutathione lyase activity
CY96_RS04350	COG0346	lactoylglutathione lyase activity
CY96_RS04355	COG0457	Tetratricopeptide repeat
CY96_RS04365	COG2267	carboxylic ester hydrolase activity
CY96_RS04385	COG2140	Oxalate decarboxylase
CY96_RS04390	COG3620	sequence-specific DNA binding
CY96_RS04395	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CY96_RS04400	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CY96_RS04410	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CY96_RS04415	COG1695	Transcriptional regulator
CY96_RS04435	COG3973	AAA domain
CY96_RS04465	COG4980	gas vesicle protein
CY96_RS04470	COG0537	adenosine 5'-monophosphoramidase activity
CY96_RS04475	COG1131	(ABC) transporter
CY96_RS04480	COG4473	ABC transporter
CY96_RS04490	COG1309	transcriptional regulator
CY96_RS04500	COG3402	PFAM membrane-flanked domain
CY96_RS04505	COG3428	Bacterial PH domain
CY96_RS04545	COG0697	spore germination
CY96_RS04550	COG3402	PFAM membrane-flanked domain
CY96_RS04555	COG3428	Bacterial PH domain
CY96_RS04560	COG2329	Antibiotic biosynthesis monooxygenase
CY96_RS04565	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CY96_RS04580	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CY96_RS04615	COG1309	transcriptional regulator
CY96_RS04620	COG1511	domain protein
CY96_RS04645	COG1609	Transcriptional regulator
CY96_RS04655	COG1234	tRNA 3'-trailer cleavage
CY96_RS04660	COG0095	Lipoate-protein ligase
CY96_RS04670	COG0318	PFAM AMP-dependent synthetase and ligase
CY96_RS04680	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CY96_RS04690	COG4208	sulfate ABC transporter
CY96_RS04705	COG1408	metallophosphoesterase
CY96_RS04710	COG1078	dGTPase activity
CY96_RS04720	COG1595	DNA-templated transcription, initiation
CY96_RS04725	COG3708	Transcriptional regulator
CY96_RS04725	COG2207	Transcriptional regulator
CY96_RS04735	COG2205	protein histidine kinase activity
CY96_RS04740	COG0745	RESPONSE REGULATOR receiver
CY96_RS04760	COG0501	Belongs to the peptidase M48B family
CY96_RS04765	COG0840	transmembrane signaling receptor activity
CY96_RS04770	COG3693	PFAM glycoside hydrolase, family 10
CY96_RS04780	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CY96_RS04785	COG2224	Isocitrate lyase
CY96_RS04800	COG1278	Cold shock
CY96_RS04820	COG0398	Pfam SNARE associated Golgi protein
CY96_RS04880	COG0179	Fumarylacetoacetate (FAA) hydrolase
CY96_RS04905	COG0367	asparagine synthase
CY96_RS04915	COG0753	catalase activity
CY96_RS04920	COG0004	ammonium transporteR
CY96_RS04935	COG2996	Protein conserved in bacteria
CY96_RS04950	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CY96_RS04965	COG0561	phosphatase activity
CY96_RS04990	COG2267	carboxylic ester hydrolase activity
CY96_RS05005	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CY96_RS05010	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CY96_RS05015	COG5504	Zn-dependent protease
CY96_RS05030	COG0180	Tryptophanyl-tRNA synthetase
CY96_RS05040	COG4166	transmembrane transport
CY96_RS05045	COG0601	transmembrane transport
CY96_RS05050	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CY96_RS05055	COG0444	Belongs to the ABC transporter superfamily
CY96_RS05060	COG4608	Belongs to the ABC transporter superfamily
CY96_RS05065	COG0534	Mate efflux family protein
CY96_RS05070	COG4166	transmembrane transport
CY96_RS05090	COG0861	Integral membrane protein TerC family
CY96_RS05100	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CY96_RS05110	COG1164	Oligoendopeptidase f
CY96_RS05125	COG2346	COG2346, Truncated hemoglobins
CY96_RS05130	COG4116	CYTH
CY96_RS05140	COG2357	RelA SpoT domain protein
CY96_RS05150	COG0564	pseudouridine synthase activity
CY96_RS05165	COG0772	Belongs to the SEDS family
CY96_RS05170	COG1216	Glycosyl transferase, family 2
CY96_RS05190	COG0463	Glycosyl transferase, family 2
CY96_RS05190	COG0457	Tetratricopeptide repeat
CY96_RS05210	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CY96_RS05225	COG1091	dTDP-4-dehydrorhamnose reductase activity
CY96_RS05270	COG2153	protein acetylation
CY96_RS05280	COG2382	esterase
CY96_RS05300	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CY96_RS05315	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CY96_RS05315	COG0512	Glutamine amidotransferase of anthranilate synthase
CY96_RS05350	COG1620	l-lactate permease
CY96_RS05355	COG5634	Uncharacterized conserved protein (DUF2278)
CY96_RS05405	COG0508	dehydrogenase complex catalyzes the overall conversion of
CY96_RS05415	COG1476	TRANSCRIPTIONal
CY96_RS05445	COG4152	abc transporter atp-binding protein
CY96_RS05450	COG1668	transmembrane transport
CY96_RS05475	COG1686	Belongs to the peptidase S11 family
CY96_RS05480	COG0681	Belongs to the peptidase S26 family
CY96_RS05515	COG1012	belongs to the aldehyde dehydrogenase family
CY96_RS05525	COG1176	ABC-type spermidine putrescine transport system, permease component I
CY96_RS05530	COG1177	transmembrane transport
CY96_RS05545	COG2409	Drug exporters of the RND superfamily
CY96_RS05555	COG0564	pseudouridine synthase activity
CY96_RS05565	COG2340	Cysteine-rich secretory protein family
CY96_RS05570	COG0247	lactate metabolic process
CY96_RS05575	COG0277	FAD linked oxidase domain protein
CY96_RS05580	COG3835	regulator
CY96_RS05590	COG0745	RESPONSE REGULATOR receiver
CY96_RS05595	COG5002	protein histidine kinase activity
CY96_RS05600	COG2186	Transcriptional regulator
CY96_RS05620	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CY96_RS05630	COG2116	formate transmembrane transporter activity
CY96_RS05635	COG0861	Integral membrane protein TerC family
CY96_RS05640	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CY96_RS05650	COG2030	dehydratase
CY96_RS05670	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS05675	COG3243	poly(R)-hydroxyalkanoic acid synthase
CY96_RS05685	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CY96_RS05700	COG1840	ABC-type Fe3 transport system, periplasmic component
CY96_RS05705	COG3842	ATPase activity
CY96_RS05730	COG1349	DNA-binding transcription factor activity
CY96_RS05745	COG0235	Class ii aldolase
CY96_RS05755	COG2861	carbohydrate metabolic process
CY96_RS05765	COG3852	Histidine kinase
CY96_RS05770	COG1846	Transcriptional regulator
CY96_RS05780	COG2318	DinB family
CY96_RS05790	COG5002	protein histidine kinase activity
CY96_RS05800	COG0720	synthase
CY96_RS05815	COG4873	Protein conserved in bacteria
CY96_RS05855	COG1780	Probably involved in ribonucleotide reductase function
CY96_RS05860	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CY96_RS05865	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CY96_RS05870	COG1725	Transcriptional regulator
CY96_RS05875	COG1131	(ABC) transporter
CY96_RS05885	COG1131	(ABC) transporter
CY96_RS05905	COG1522	sequence-specific DNA binding
CY96_RS05915	COG1335	isochorismatase
CY96_RS05925	COG1619	proteins homologs of microcin C7 resistance protein MccF
CY96_RS05930	COG2070	2-Nitropropane dioxygenase
CY96_RS05935	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CY96_RS05945	COG1696	Membrane protein involved in D-alanine export
CY96_RS05970	COG0716	FMN binding
CY96_RS06030	COG1846	Transcriptional regulator
CY96_RS06040	COG1301	dicarboxylic acid transport
CY96_RS06045	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CY96_RS06050	COG4709	membrane
CY96_RS06055	COG3874	Sporulation protein YtfJ
CY96_RS06085	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CY96_RS06090	COG0028	Belongs to the TPP enzyme family
CY96_RS06095	COG0440	acetolactate synthase activity
CY96_RS06170	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CY96_RS06185	COG1183	phosphatidylcholine synthase activity
CY96_RS06190	COG1368	sulfuric ester hydrolase activity
CY96_RS06200	COG0019	diaminopimelate decarboxylase activity
CY96_RS06220	COG0529	Catalyzes the synthesis of activated sulfate
CY96_RS06225	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CY96_RS06245	COG1648	precorrin-2 dehydrogenase activity
CY96_RS06255	COG0733	neurotransmitter:sodium symporter activity
CY96_RS06275	COG1757	Na H antiporter
CY96_RS06290	COG4758	membrane
CY96_RS06295	COG4585	Histidine kinase
CY96_RS06300	COG2197	response regulator
CY96_RS06310	COG1114	Component of the transport system for branched-chain amino acids
CY96_RS06365	COG0730	response to heat
CY96_RS06370	COG0306	phosphate transporter
CY96_RS06375	COG1392	Phosphate transport regulator
CY96_RS06380	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CY96_RS06395	COG3852	Histidine kinase
CY96_RS06400	COG1801	Protein of unknown function DUF72
CY96_RS06410	COG0582	viral genome integration into host DNA
CY96_RS06415	COG5002	protein histidine kinase activity
CY96_RS06430	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CY96_RS06430	COG0392	lysyltransferase activity
CY96_RS06445	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CY96_RS06450	COG1686	Belongs to the peptidase S11 family
CY96_RS06455	COG2715	membrane protein required for spore maturation
CY96_RS06460	COG0700	Nucleoside recognition
CY96_RS06465	COG1187	pseudouridine synthase activity
CY96_RS06475	COG1333	cytochrome c biogenesis protein
CY96_RS06480	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CY96_RS06485	COG0745	RESPONSE REGULATOR receiver
CY96_RS06490	COG5002	protein histidine kinase activity
CY96_RS06495	COG2096	Adenosyltransferase
CY96_RS06510	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CY96_RS06515	COG1141	Ferredoxin
CY96_RS06525	COG0514	ATP-dependent DNA helicase (RecQ)
CY96_RS06530	COG1266	CAAX protease self-immunity
CY96_RS06540	COG1408	metallophosphoesterase
CY96_RS06545	COG0789	Transcriptional regulator
CY96_RS06555	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CY96_RS06575	COG0492	ferredoxin-NADP+ reductase activity
CY96_RS06580	COG0252	asparaginase activity
CY96_RS06650	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CY96_RS06665	COG0142	geranyltranstransferase activity
CY96_RS06675	COG0142	geranyltranstransferase activity
CY96_RS06700	COG0457	Tetratricopeptide repeat
CY96_RS06720	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CY96_RS06725	COG2010	Cytochrome c
CY96_RS06725	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CY96_RS06730	COG4347	Protein of unknown function (DUF1405)
CY96_RS06745	COG2738	Putative neutral zinc metallopeptidase
CY96_RS06755	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CY96_RS06760	COG1694	Mazg nucleotide pyrophosphohydrolase
CY96_RS06780	COG0438	transferase activity, transferring glycosyl groups
CY96_RS06820	COG1199	ATP-dependent helicase activity
CY96_RS06820	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CY96_RS06840	COG3935	DnaD domain protein
CY96_RS06845	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CY96_RS06855	COG4499	WXG100 protein secretion system (Wss), protein YukC
CY96_RS06855	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CY96_RS06905	COG0116	Belongs to the methyltransferase superfamily
CY96_RS06915	COG1199	ATP-dependent helicase activity
CY96_RS06920	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CY96_RS06930	COG0024	Methionine aminopeptidase
CY96_RS06940	COG2233	PERMEase
CY96_RS06945	COG2311	Membrane
CY96_RS06950	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CY96_RS06960	COG0456	acetyltransferase
CY96_RS07000	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CY96_RS07015	COG3944	biosynthesis protein
CY96_RS07025	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CY96_RS07040	COG1215	transferase activity, transferring glycosyl groups
CY96_RS07045	COG0438	transferase activity, transferring glycosyl groups
CY96_RS07060	COG0454	-acetyltransferase
CY96_RS07080	COG0328	RNA-DNA hybrid ribonuclease activity
CY96_RS07115	COG3403	YqcI/YcgG family
CY96_RS07120	COG1280	lysine exporter protein (LysE YggA)
CY96_RS07140	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CY96_RS07145	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CY96_RS07155	COG0475	glutathione-regulated potassium exporter activity
CY96_RS07160	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CY96_RS07165	COG4978	Transcriptional regulator
CY96_RS07165	COG0789	Transcriptional regulator
CY96_RS07175	COG2323	membrane
CY96_RS07180	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CY96_RS07215	COG1923	regulation of RNA biosynthetic process
CY96_RS07225	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CY96_RS07230	COG1360	Flagellar Motor Protein
CY96_RS07235	COG2201	protein-glutamate methylesterase activity
CY96_RS07240	COG2198	Histidine kinase
CY96_RS07240	COG0643	Histidine kinase
CY96_RS07245	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CY96_RS07245	COG1776	CheC inhibitor of MCP methylation
CY96_RS07260	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CY96_RS07280	COG1256	bacterial-type flagellum assembly
CY96_RS07285	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CY96_RS07305	COG1815	bacterial-type flagellum-dependent cell motility
CY96_RS07310	COG1558	bacterial-type flagellum-dependent cell motility
CY96_RS07320	COG1766	The M ring may be actively involved in energy transduction
CY96_RS07325	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CY96_RS07335	COG1157	protein secretion by the type III secretion system
CY96_RS07355	COG1749	Flagellar hook protein flgE
CY96_RS07370	COG0835	chemotaxis
CY96_RS07370	COG0784	Response regulator, receiver
CY96_RS07380	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CY96_RS07385	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CY96_RS07390	COG0741	lytic transglycosylase activity
CY96_RS07400	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CY96_RS07405	COG1776	CheC inhibitor of MCP methylation
CY96_RS07405	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CY96_RS07415	COG1338	Plays a role in the flagellum-specific transport system
CY96_RS07420	COG1987	bacterial-type flagellum assembly
CY96_RS07430	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CY96_RS07435	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CY96_RS07440	COG1419	protein localization to endoplasmic reticulum
CY96_RS07445	COG4786	Flagellar basal body rod
CY96_RS07450	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CY96_RS07485	COG2329	Antibiotic biosynthesis monooxygenase
CY96_RS07510	COG0583	DNA-binding transcription factor activity
CY96_RS07555	COG0406	alpha-ribazole phosphatase activity
CY96_RS07585	COG0367	asparagine synthase
CY96_RS07615	COG1802	Transcriptional regulator
CY96_RS07620	COG0697	spore germination
CY96_RS07630	COG0523	cobalamin synthesis protein
CY96_RS07635	COG0701	Predicted permease
CY96_RS07650	COG1757	Na H antiporter
CY96_RS07655	COG0789	Transcriptional regulator
CY96_RS07690	COG0534	Mate efflux family protein
CY96_RS07695	COG3340	Belongs to the peptidase S51 family
CY96_RS07715	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CY96_RS07895	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CY96_RS07980	COG1484	DNA-dependent DNA replication
CY96_RS08025	COG2733	membrane
CY96_RS08060	COG1131	(ABC) transporter
CY96_RS08080	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CY96_RS08085	COG0528	UMP kinase activity
CY96_RS08095	COG1027	Aspartate ammonia-lyase
CY96_RS08100	COG0281	malic enzyme
CY96_RS08105	COG4191	Histidine kinase
CY96_RS08110	COG0784	Response regulator, receiver
CY96_RS08115	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CY96_RS08175	COG2814	Major facilitator Superfamily
CY96_RS08190	COG1695	Transcriptional regulator
CY96_RS08200	COG0477	Major facilitator Superfamily
CY96_RS08210	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CY96_RS08215	COG2223	nitrite transmembrane transporter activity
CY96_RS08220	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CY96_RS08240	COG0733	neurotransmitter:sodium symporter activity
CY96_RS08250	COG5566	PFAM Mor transcription activator
CY96_RS08255	COG2323	membrane
CY96_RS08275	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CY96_RS08285	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CY96_RS08290	COG0028	Belongs to the TPP enzyme family
CY96_RS08310	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CY96_RS08335	COG2814	Major facilitator Superfamily
CY96_RS08340	COG3384	dioxygenase
CY96_RS08350	COG3279	Response regulator of the LytR AlgR family
CY96_RS08355	COG0427	acetyl-CoA hydrolase
CY96_RS08375	COG4166	transmembrane transport
CY96_RS08380	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS08385	COG0745	RESPONSE REGULATOR receiver
CY96_RS08400	COG1914	H( )-stimulated, divalent metal cation uptake system
CY96_RS08415	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CY96_RS08425	COG0531	amino acid
CY96_RS08460	COG1309	transcriptional regulator
CY96_RS08465	COG2390	Transcriptional regulator
CY96_RS08475	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CY96_RS08480	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CY96_RS08495	COG4846	Membrane protein involved in cytochrome C biogenesis
CY96_RS08520	COG0006	proline dipeptidase activity
CY96_RS08530	COG2132	Multicopper oxidase
CY96_RS08540	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CY96_RS08560	COG1114	Component of the transport system for branched-chain amino acids
CY96_RS08570	COG2372	response to copper ion
CY96_RS08570	COG1276	copper resistance
CY96_RS08575	COG4549	nuclear export factor GLE1
CY96_RS08580	COG0697	spore germination
CY96_RS08585	COG0583	DNA-binding transcription factor activity
CY96_RS08590	COG1959	2 iron, 2 sulfur cluster binding
CY96_RS08595	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CY96_RS08600	COG0778	Nitroreductase
CY96_RS08615	COG0628	permease
CY96_RS08625	COG1231	oxidoreductase activity
CY96_RS08630	COG0523	cobalamin synthesis protein
CY96_RS08640	COG0411	ABC transporter
CY96_RS08660	COG0583	DNA-binding transcription factor activity
CY96_RS08690	COG1271	oxidase subunit
CY96_RS08695	COG1294	oxidase, subunit
CY96_RS08700	COG4988	ABC transporter
CY96_RS08705	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CY96_RS08715	COG1216	Glycosyl transferase, family 2
CY96_RS08755	COG1686	Belongs to the peptidase S11 family
CY96_RS08770	COG0791	NLP P60 protein
CY96_RS08770	COG1388	LysM domain
CY96_RS08780	COG1132	(ABC) transporter
CY96_RS08785	COG0745	RESPONSE REGULATOR receiver
CY96_RS08790	COG5002	protein histidine kinase activity
CY96_RS08795	COG0300	oxidoreductase activity
CY96_RS08825	COG0460	homoserine dehydrogenase
CY96_RS08850	COG1316	TRANSCRIPTIONal
CY96_RS08860	COG0745	RESPONSE REGULATOR receiver
CY96_RS08865	COG5002	protein histidine kinase activity
CY96_RS08880	COG1285	pathogenesis
CY96_RS08885	COG1247	-acetyltransferase
CY96_RS08905	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CY96_RS08915	COG1082	Xylose isomerase domain protein TIM barrel
CY96_RS08925	COG2814	Major facilitator Superfamily
CY96_RS08930	COG1279	arginine transmembrane transporter activity
CY96_RS08935	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS08945	COG1752	Esterase of the alpha-beta hydrolase superfamily
CY96_RS08980	COG0577	efflux transmembrane transporter activity
CY96_RS08985	COG2002	toxin-antitoxin pair type II binding
CY96_RS08990	COG1404	Belongs to the peptidase S8 family
CY96_RS09025	COG0840	transmembrane signaling receptor activity
CY96_RS09045	COG3949	Membrane
CY96_RS09050	COG0783	Belongs to the Dps family
CY96_RS09065	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CY96_RS09075	COG1231	oxidoreductase activity
CY96_RS09080	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS09085	COG4989	oxidoreductase activity
CY96_RS09090	COG0523	cobalamin synthesis protein
CY96_RS09095	COG0456	acetyltransferase
CY96_RS09100	COG0803	Belongs to the bacterial solute-binding protein 9 family
CY96_RS09110	COG0702	epimerase
CY96_RS09120	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CY96_RS09130	COG4166	transmembrane transport
CY96_RS09155	COG5337	Spore coat protein CotH
CY96_RS09160	COG1051	belongs to the nudix hydrolase family
CY96_RS09165	COG0586	Pfam SNARE associated Golgi protein
CY96_RS09170	COG2244	polysaccharide biosynthetic process
CY96_RS09180	COG0701	Predicted permease
CY96_RS09185	COG3689	TIGRFAM TIGR03943 family protein
CY96_RS09190	COG1607	acyl-coa hydrolase
CY96_RS09195	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CY96_RS09210	COG0702	epimerase
CY96_RS09215	COG2839	Protein conserved in bacteria
CY96_RS09220	COG1253	flavin adenine dinucleotide binding
CY96_RS09235	COG1114	Component of the transport system for branched-chain amino acids
CY96_RS09240	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CY96_RS09260	COG0860	N-Acetylmuramoyl-L-alanine amidase
CY96_RS09270	COG1876	peptidase activity
CY96_RS09280	COG0154	amidase activity
CY96_RS09285	COG2211	Major facilitator Superfamily
CY96_RS09300	COG0860	N-Acetylmuramoyl-L-alanine amidase
CY96_RS09310	COG0561	phosphatase activity
CY96_RS09325	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CY96_RS09335	COG1819	glycosyl
CY96_RS09340	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CY96_RS09345	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS09375	COG0456	acetyltransferase
CY96_RS09410	COG4499	WXG100 protein secretion system (Wss), protein YukC
CY96_RS09505	COG3874	Sporulation protein YtfJ
CY96_RS09530	COG2226	methyltransferase
CY96_RS09550	COG1082	Xylose isomerase domain protein TIM barrel
CY96_RS09555	COG0346	lactoylglutathione lyase activity
CY96_RS09565	COG0604	alcohol dehydrogenase
CY96_RS09570	COG1595	DNA-templated transcription, initiation
CY96_RS09595	COG0386	Belongs to the glutathione peroxidase family
CY96_RS09600	COG1305	Transglutaminase-like
CY96_RS09605	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
CY96_RS09610	COG0714	Associated with various cellular activities
CY96_RS09625	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CY96_RS09630	COG1140	nitrate reductase beta subunit
CY96_RS09635	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CY96_RS09640	COG2181	nitrate reductase activity
CY96_RS09645	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CY96_RS09650	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CY96_RS09655	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CY96_RS09660	COG0303	'Molybdopterin
CY96_RS09665	COG0314	molybdopterin synthase activity
CY96_RS09670	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CY96_RS09675	COG2223	nitrite transmembrane transporter activity
CY96_RS09695	COG1648	precorrin-2 dehydrogenase activity
CY96_RS09705	COG1587	Uroporphyrinogen-III synthase
CY96_RS09705	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CY96_RS09710	COG2146	nitrite reductase [NAD(P)H] activity
CY96_RS09715	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CY96_RS09720	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CY96_RS09755	COG2359	stage V sporulation protein S
CY96_RS09775	COG0457	Tetratricopeptide repeat
CY96_RS09790	COG1418	mRNA catabolic process
CY96_RS09795	COG0488	(ABC) transporter
CY96_RS09810	COG0629	single-stranded DNA binding
CY96_RS09820	COG1413	lyase activity
CY96_RS09835	COG2136	Putative SAM-dependent methyltransferase
CY96_RS09835	COG2521	methyltransferase
CY96_RS09840	COG0018	arginyl-trna synthetase
CY96_RS09880	COG0017	Asparaginyl-tRNA synthetase
CY96_RS09885	COG0733	neurotransmitter:sodium symporter activity
CY96_RS09910	COG2610	gluconate transmembrane transporter activity
CY96_RS09920	COG1794	racemase activity, acting on amino acids and derivatives
CY96_RS09930	COG0456	acetyltransferase
CY96_RS09940	COG3655	Transcriptional regulator
CY96_RS09945	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CY96_RS09955	COG1131	(ABC) transporter
CY96_RS09960	COG4473	ABC transporter
CY96_RS09970	COG0546	phosphoglycolate phosphatase activity
CY96_RS09985	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CY96_RS10000	COG0768	penicillin binding
CY96_RS10010	COG0204	Acyl-transferase
CY96_RS10015	COG1272	protein, Hemolysin III
CY96_RS10025	COG0805	protein transport
CY96_RS10035	COG1307	EDD domain protein, DegV family
CY96_RS10045	COG1999	signal sequence binding
CY96_RS10055	COG0367	asparagine synthase
CY96_RS10070	COG0860	N-Acetylmuramoyl-L-alanine amidase
CY96_RS10075	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CY96_RS10080	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CY96_RS10100	COG1335	isochorismatase
CY96_RS10110	COG0668	transmembrane transport
CY96_RS10115	COG2203	Gaf domain
CY96_RS10115	COG4585	Histidine kinase
CY96_RS10120	COG2197	response regulator
CY96_RS10125	COG1737	Transcriptional regulator
CY96_RS10130	COG0384	phenazine biosynthesis protein PhzF
CY96_RS10135	COG1064	alcohol dehydrogenase
CY96_RS10150	COG1070	Carbohydrate kinase
CY96_RS10160	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CY96_RS10190	COG0517	IMP dehydrogenase activity
CY96_RS10190	COG1125	glycine betaine transport
CY96_RS10195	COG1174	glycine betaine transport
CY96_RS10230	COG1253	flavin adenine dinucleotide binding
CY96_RS10235	COG1012	belongs to the aldehyde dehydrogenase family
CY96_RS10240	COG5506	Protein of unknown function (DUF1694)
CY96_RS10255	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CY96_RS10260	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CY96_RS10265	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CY96_RS10270	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CY96_RS10275	COG0456	acetyltransferase
CY96_RS10280	COG3829	transcription factor binding
CY96_RS10285	COG1509	lysine 2,3-aminomutase activity
CY96_RS10320	COG4991	sh3 domain protein
CY96_RS10320	COG3064	Membrane
CY96_RS10320	COG0515	serine threonine protein kinase
CY96_RS10330	COG0671	phosphoesterase, PA-phosphatase related
CY96_RS10335	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CY96_RS10340	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CY96_RS10405	COG0300	oxidoreductase activity
CY96_RS10425	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CY96_RS10425	COG4499	WXG100 protein secretion system (Wss), protein YukC
CY96_RS10435	COG2814	Major facilitator Superfamily
CY96_RS10440	COG4841	protein insertion into membrane
CY96_RS10445	COG0372	Belongs to the citrate synthase family
CY96_RS10450	COG2079	MmgE PrpD family protein
CY96_RS10455	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CY96_RS10460	COG1960	acyl-CoA dehydrogenase activity
CY96_RS10465	COG2084	Dehydrogenase
CY96_RS10475	COG1280	lysine exporter protein (LysE YggA)
CY96_RS10480	COG1024	Enoyl-CoA hydratase
CY96_RS10495	COG0420	3'-5' exonuclease activity
CY96_RS10500	COG0419	ATPase involved in DNA repair
CY96_RS10525	COG2223	nitrite transmembrane transporter activity
CY96_RS10530	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS10535	COG1169	isochorismate synthase
CY96_RS10540	COG1021	2,3-dihydroxybenzoate-AMP ligase
CY96_RS10545	COG1535	isochorismatase
CY96_RS10545	COG3433	isochorismatase activity
CY96_RS10550	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CY96_RS10555	COG3251	PFAM MbtH domain protein
CY96_RS10560	COG2814	Major facilitator Superfamily
CY96_RS10575	COG0776	regulation of translation
CY96_RS10585	COG2318	DinB family
CY96_RS10595	COG1115	amino acid carrier protein
CY96_RS10610	COG2329	Antibiotic biosynthesis monooxygenase
CY96_RS10615	COG1187	pseudouridine synthase activity
CY96_RS10620	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CY96_RS10625	COG1136	(ABC) transporter
CY96_RS10635	COG0028	Belongs to the TPP enzyme family
CY96_RS10670	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CY96_RS10685	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS10720	COG1247	-acetyltransferase
CY96_RS10745	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CY96_RS10755	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS10785	COG0583	DNA-binding transcription factor activity
CY96_RS10790	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CY96_RS10810	COG0583	DNA-binding transcription factor activity
CY96_RS10815	COG2258	MOSC domain
CY96_RS10830	COG1132	(ABC) transporter
CY96_RS10835	COG1132	(ABC) transporter
CY96_RS10890	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CY96_RS10895	COG1595	DNA-templated transcription, initiation
CY96_RS10920	COG1649	PFAM Uncharacterised BCR, COG1649
CY96_RS10945	COG2971	BadF BadG BcrA BcrD
CY96_RS10965	COG1846	Transcriptional regulator
CY96_RS10980	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS10995	COG1309	transcriptional regulator
CY96_RS11025	COG0500	methyltransferase
CY96_RS11025	COG3615	Tellurite resistance protein tehB
CY96_RS11035	COG2226	methyltransferase
CY96_RS11040	COG3961	Belongs to the TPP enzyme family
CY96_RS11045	COG1846	Transcriptional regulator
CY96_RS11075	COG2195	Cleaves the N-terminal amino acid of tripeptides
CY96_RS11100	COG2002	toxin-antitoxin pair type II binding
CY96_RS11110	COG0730	response to heat
CY96_RS11115	COG0110	maltose O-acetyltransferase activity
CY96_RS11120	COG1686	Belongs to the peptidase S11 family
CY96_RS11130	COG2814	Major facilitator Superfamily
CY96_RS11170	COG2312	Erythromycin esterase
CY96_RS11175	COG0741	lytic transglycosylase activity
CY96_RS11180	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS11220	COG1760	l-serine dehydratase
CY96_RS11225	COG1760	l-serine dehydratase
CY96_RS11230	COG0814	amino acid
CY96_RS11250	COG1533	DNA photolyase activity
CY96_RS11270	COG0772	Belongs to the SEDS family
CY96_RS11275	COG2239	Acts as a magnesium transporter
CY96_RS11285	COG0768	penicillin binding
CY96_RS11290	COG1595	DNA-templated transcription, initiation
CY96_RS11300	COG0768	penicillin binding
CY96_RS11305	COG0768	penicillin binding
CY96_RS11315	COG1408	metallophosphoesterase
CY96_RS11325	COG1131	(ABC) transporter
CY96_RS11335	COG1309	transcriptional regulator
CY96_RS11350	COG1960	acyl-CoA dehydrogenase activity
CY96_RS11355	COG0439	Biotin carboxylase
CY96_RS11360	COG0511	ligase activity, forming carbon-carbon bonds
CY96_RS11365	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CY96_RS11370	COG1024	Enoyl-CoA hydratase
CY96_RS11375	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CY96_RS11380	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CY96_RS11400	COG0572	uridine kinase
CY96_RS11420	COG1686	Belongs to the peptidase S11 family
CY96_RS11445	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CY96_RS11460	COG3227	Zinc metalloprotease (Elastase)
CY96_RS11465	COG2207	Transcriptional regulator
CY96_RS11495	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CY96_RS11520	COG2814	Major facilitator Superfamily
CY96_RS11525	COG1733	regulation of RNA biosynthetic process
CY96_RS11530	COG2226	methyltransferase
CY96_RS11570	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS11575	COG2368	4-hydroxyphenylacetate
CY96_RS11585	COG1063	alcohol dehydrogenase
CY96_RS11595	COG2323	membrane
CY96_RS11600	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CY96_RS11610	COG3386	PFAM SMP-30 Gluconolaconase
CY96_RS11625	COG3773	Cell wall hydrolase
CY96_RS11635	COG0745	RESPONSE REGULATOR receiver
CY96_RS11640	COG2205	protein histidine kinase activity
CY96_RS11645	COG0488	(ABC) transporter
CY96_RS11655	COG1136	(ABC) transporter
CY96_RS11660	COG0577	efflux transmembrane transporter activity
CY96_RS11680	COG0460	homoserine dehydrogenase
CY96_RS11685	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS11695	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CY96_RS11765	COG2124	cytochrome p450
CY96_RS11800	COG0561	phosphatase activity
CY96_RS11805	COG5002	protein histidine kinase activity
CY96_RS11810	COG0768	penicillin binding
CY96_RS11820	COG1819	glycosyl
CY96_RS11825	COG1794	racemase activity, acting on amino acids and derivatives
CY96_RS11845	COG2205	protein histidine kinase activity
CY96_RS11895	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CY96_RS11905	COG0745	RESPONSE REGULATOR receiver
CY96_RS11910	COG5002	protein histidine kinase activity
CY96_RS11915	COG0604	alcohol dehydrogenase
CY96_RS11920	COG0671	phosphoesterase, PA-phosphatase related
CY96_RS11925	COG0768	penicillin binding
CY96_RS11965	COG2814	Major facilitator Superfamily
CY96_RS11970	COG2814	Major facilitator Superfamily
CY96_RS11985	COG0584	glycerophosphoryl diester phosphodiesterase
CY96_RS12005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS12010	COG0697	spore germination
CY96_RS12045	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CY96_RS12055	COG2223	nitrite transmembrane transporter activity
CY96_RS12070	COG0592	DNA-directed DNA polymerase activity
CY96_RS12095	COG3878	Protein conserved in bacteria
CY96_RS12155	COG0322	excinuclease ABC activity
CY96_RS12195	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CY96_RS12215	COG1011	Hydrolase
CY96_RS12220	COG0745	RESPONSE REGULATOR receiver
CY96_RS12225	COG5002	protein histidine kinase activity
CY96_RS12240	COG1136	(ABC) transporter
CY96_RS12245	COG0577	efflux transmembrane transporter activity
CY96_RS12250	COG1073	alpha beta
CY96_RS12255	COG0657	acetylesterase activity
CY96_RS12260	COG0076	glutamate decarboxylase activity
CY96_RS12275	COG1523	belongs to the glycosyl hydrolase 13 family
CY96_RS12280	COG3227	Zinc metalloprotease (Elastase)
CY96_RS12285	COG0737	Belongs to the 5'-nucleotidase family
CY96_RS12300	COG0201	protein transport
CY96_RS12305	COG0697	spore germination
CY96_RS12310	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS12350	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS12365	COG2959	enzyme of heme biosynthesis
CY96_RS12405	COG1309	transcriptional regulator
CY96_RS12435	COG3284	Transcriptional regulator
CY96_RS12455	COG1349	DNA-binding transcription factor activity
CY96_RS12470	COG1959	2 iron, 2 sulfur cluster binding
CY96_RS12485	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CY96_RS12490	COG0508	dehydrogenase complex catalyzes the overall conversion of
CY96_RS12495	COG0022	dehydrogenase e1 component
CY96_RS12500	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CY96_RS12510	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS12515	COG0456	acetyltransferase
CY96_RS12515	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CY96_RS12520	COG2816	NAD+ diphosphatase activity
CY96_RS12550	COG4176	ABC-type proline glycine betaine transport system permease component
CY96_RS12555	COG0517	IMP dehydrogenase activity
CY96_RS12555	COG4175	Glycine betaine
CY96_RS12585	COG2153	protein acetylation
CY96_RS12590	COG3397	chitin binding
CY96_RS12595	COG1819	glycosyl
CY96_RS12615	COG2205	protein histidine kinase activity
CY96_RS12620	COG2226	methyltransferase
CY96_RS12625	COG2315	Protein conserved in bacteria
CY96_RS12670	COG0456	acetyltransferase
CY96_RS12675	COG3973	AAA domain
CY96_RS12690	COG0514	ATP-dependent DNA helicase (RecQ)
CY96_RS12720	COG4637	Psort location Cytoplasmic, score
CY96_RS12735	COG3397	chitin binding
CY96_RS12750	COG1162	GTPase activity
CY96_RS12755	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CY96_RS12760	COG1115	amino acid carrier protein
CY96_RS12765	COG1012	belongs to the aldehyde dehydrogenase family
CY96_RS12770	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CY96_RS12780	COG3938	Belongs to the proline racemase family
CY96_RS12785	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CY96_RS12835	COG1078	dGTPase activity
CY96_RS12840	COG0586	Pfam SNARE associated Golgi protein
CY96_RS12850	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CY96_RS12860	COG4166	transmembrane transport
CY96_RS12870	COG4948	Mandelate Racemase Muconate Lactonizing
CY96_RS12885	COG0667	Aldo Keto reductase
CY96_RS12930	COG5002	protein histidine kinase activity
CY96_RS12930	COG3850	Histidine kinase
CY96_RS12935	COG0745	RESPONSE REGULATOR receiver
CY96_RS12970	COG1164	Oligoendopeptidase f
CY96_RS12975	COG1307	EDD domain protein, DegV family
CY96_RS13015	COG2814	Major facilitator Superfamily
CY96_RS13025	COG1664	Polymer-forming cytoskeletal
CY96_RS13030	COG0789	Transcriptional regulator
CY96_RS13035	COG4533	DNA binding
CY96_RS13040	COG0477	Major facilitator Superfamily
CY96_RS13040	COG2814	Major facilitator Superfamily
CY96_RS13060	COG2261	transglycosylase associated protein
CY96_RS13075	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CY96_RS13110	COG0436	Aminotransferase
CY96_RS13115	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CY96_RS13125	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CY96_RS13140	COG1131	(ABC) transporter
CY96_RS13190	COG0628	permease
CY96_RS13205	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CY96_RS13210	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CY96_RS13215	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CY96_RS13245	COG2746	aminoglycoside 3-N-acetyltransferase activity
CY96_RS13265	COG0697	spore germination
CY96_RS13285	COG4912	Dna alkylation repair
CY96_RS13295	COG0346	lactoylglutathione lyase activity
CY96_RS13305	COG0861	Integral membrane protein TerC family
CY96_RS13310	COG1368	sulfuric ester hydrolase activity
CY96_RS13315	COG0488	(ABC) transporter
CY96_RS13320	COG2409	Drug exporters of the RND superfamily
CY96_RS13320	COG1033	growth of symbiont in host cell
CY96_RS13325	COG1309	transcriptional regulator
CY96_RS13340	COG0287	Prephenate dehydrogenase
CY96_RS13355	COG1605	Chorismate mutase
CY96_RS13355	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CY96_RS13395	COG1388	LysM domain
CY96_RS13395	COG3584	3D domain protein
CY96_RS13405	COG0346	lactoylglutathione lyase activity
CY96_RS13435	COG1879	ABC-type sugar transport system periplasmic component
CY96_RS13440	COG1172	Belongs to the binding-protein-dependent transport system permease family
CY96_RS13445	COG1172	Belongs to the binding-protein-dependent transport system permease family
CY96_RS13455	COG2390	Transcriptional regulator
CY96_RS13460	COG1070	Carbohydrate kinase
CY96_RS13480	COG2329	Antibiotic biosynthesis monooxygenase
CY96_RS13500	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CY96_RS13515	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CY96_RS13520	COG4187	Peptidase family M20/M25/M40
CY96_RS13525	COG1414	Transcriptional regulator
CY96_RS13530	COG0833	amino acid
CY96_RS13540	COG3239	Fatty acid desaturase
CY96_RS13550	COG2720	vancomycin resistance protein
CY96_RS13555	COG1785	Belongs to the alkaline phosphatase family
CY96_RS13565	COG3655	Transcriptional regulator
CY96_RS13590	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS13595	COG0346	lactoylglutathione lyase activity
CY96_RS13615	COG0714	Associated with various cellular activities
CY96_RS13640	COG0463	Glycosyl transferase, family 2
CY96_RS13675	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CY96_RS13680	COG0753	catalase activity
CY96_RS13720	COG0714	Associated with various cellular activities
CY96_RS13760	COG0778	Nitroreductase
CY96_RS13765	COG1846	Transcriptional regulator
CY96_RS13780	COG1051	belongs to the nudix hydrolase family
CY96_RS13785	COG4884	unkown
CY96_RS13785	COG3831	ATPase activity
CY96_RS13800	COG1136	(ABC) transporter
CY96_RS13800	COG0577	efflux transmembrane transporter activity
CY96_RS13830	COG0590	tRNA wobble adenosine to inosine editing
CY96_RS13830	COG0037	tRNA processing
CY96_RS13835	COG0456	acetyltransferase
CY96_RS13850	COG0697	spore germination
CY96_RS13855	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS13900	COG0730	response to heat
CY96_RS13910	COG0833	amino acid
CY96_RS13920	COG4335	DNA alkylation repair
CY96_RS13960	COG0768	penicillin binding
CY96_RS13995	COG1984	allophanate hydrolase subunit 2
CY96_RS14000	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CY96_RS14005	COG1414	Transcriptional regulator
CY96_RS14015	COG3142	Participates in the control of copper homeostasis
CY96_RS14020	COG0640	Transcriptional regulator
CY96_RS14030	COG1960	acyl-CoA dehydrogenase activity
CY96_RS14045	COG3314	Sporulation integral membrane protein YlbJ
CY96_RS14065	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CY96_RS14080	COG3848	Pyruvate phosphate dikinase
CY96_RS14080	COG0574	Belongs to the PEP-utilizing enzyme family
CY96_RS14090	COG0367	asparagine synthase
CY96_RS14095	COG0583	DNA-binding transcription factor activity
CY96_RS14125	COG1522	sequence-specific DNA binding
CY96_RS14130	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS14135	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS14155	COG1063	alcohol dehydrogenase
CY96_RS14165	COG1027	Aspartate ammonia-lyase
CY96_RS14170	COG0252	asparaginase activity
CY96_RS14175	COG1396	sequence-specific DNA binding
CY96_RS14200	COG5002	protein histidine kinase activity
CY96_RS14205	COG0745	RESPONSE REGULATOR receiver
CY96_RS14215	COG5002	protein histidine kinase activity
CY96_RS14240	COG2207	Transcriptional regulator
CY96_RS14255	COG0322	excinuclease ABC activity
CY96_RS14260	COG0531	amino acid
CY96_RS14265	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CY96_RS14275	COG0531	amino acid
CY96_RS14280	COG0697	spore germination
CY96_RS14285	COG0784	Response regulator, receiver
CY96_RS14290	COG4191	Histidine kinase
CY96_RS14300	COG1115	amino acid carrier protein
CY96_RS14325	COG0737	Belongs to the 5'-nucleotidase family
CY96_RS14330	COG2267	carboxylic ester hydrolase activity
CY96_RS14335	COG1335	isochorismatase
CY96_RS14360	COG0583	DNA-binding transcription factor activity
CY96_RS14370	COG2814	Major facilitator Superfamily
CY96_RS14400	COG0598	Magnesium transport protein CorA
CY96_RS14420	COG1073	alpha beta
CY96_RS14440	COG0415	Belongs to the DNA photolyase family
CY96_RS14450	COG1846	Transcriptional regulator
CY96_RS14475	COG2814	Major facilitator Superfamily
CY96_RS14485	COG0657	acetylesterase activity
CY96_RS14490	COG0288	reversible hydration of carbon dioxide
CY96_RS14500	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CY96_RS14505	COG5609	conserved protein (DUF2294)
CY96_RS14510	COG2814	Major facilitator Superfamily
CY96_RS14535	COG0456	acetyltransferase
CY96_RS14540	COG1575	Belongs to the MenA family. Type 1 subfamily
CY96_RS14565	COG0798	PFAM Bile acid sodium symporter
CY96_RS14570	COG0346	lactoylglutathione lyase activity
CY96_RS14575	COG0640	Transcriptional regulator
CY96_RS14585	COG0561	phosphatase activity
CY96_RS14590	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CY96_RS14590	COG3320	Male sterility
CY96_RS14595	COG1309	transcriptional regulator
CY96_RS14610	COG0346	lactoylglutathione lyase activity
CY96_RS14695	COG2814	Major facilitator Superfamily
CY96_RS14715	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CY96_RS14730	COG1690	Belongs to the RtcB family
CY96_RS14740	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CY96_RS14760	COG0577	efflux transmembrane transporter activity
CY96_RS14775	COG3850	Histidine kinase
CY96_RS14775	COG5002	protein histidine kinase activity
CY96_RS14785	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CY96_RS14810	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CY96_RS14850	COG3409	Peptidoglycan-binding domain 1 protein
CY96_RS14850	COG5632	N-Acetylmuramoyl-L-alanine amidase
CY96_RS15115	COG5444	nuclease activity
CY96_RS15250	COG1876	peptidase activity
CY96_RS15255	COG2843	Capsule synthesis protein
CY96_RS15265	COG0477	Major facilitator Superfamily
CY96_RS15280	COG1846	Transcriptional regulator
CY96_RS15285	COG2814	Major facilitator Superfamily
CY96_RS15295	COG2031	fatty acid transporter
CY96_RS15360	COG1288	antiporter activity
CY96_RS15365	COG2356	endonuclease I
CY96_RS15385	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CY96_RS15405	COG1733	regulation of RNA biosynthetic process
CY96_RS15410	COG0778	Nitroreductase
CY96_RS15440	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS15450	COG1131	(ABC) transporter
CY96_RS15475	COG1011	Hydrolase
CY96_RS15480	COG2365	Tyrosine phosphatase family
CY96_RS15510	COG0628	permease
CY96_RS15540	COG0500	methyltransferase
CY96_RS15550	COG0477	Major facilitator Superfamily
CY96_RS15580	COG1253	flavin adenine dinucleotide binding
CY96_RS15585	COG0789	Transcriptional regulator
CY96_RS15595	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CY96_RS15625	COG0697	spore germination
CY96_RS15630	COG1357	PFAM Pentapeptide repeats (8 copies)
CY96_RS15635	COG3813	Protein conserved in bacteria
CY96_RS15640	COG2706	6-phosphogluconolactonase activity
CY96_RS15645	COG1070	Carbohydrate kinase
CY96_RS15655	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CY96_RS15660	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CY96_RS15665	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CY96_RS15670	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CY96_RS15695	COG0840	transmembrane signaling receptor activity
CY96_RS15705	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CY96_RS15705	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CY96_RS15710	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CY96_RS15710	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CY96_RS15715	COG1733	regulation of RNA biosynthetic process
CY96_RS15735	COG2824	Alkylphosphonate utilization operon protein PhnA
CY96_RS15740	COG0659	secondary active sulfate transmembrane transporter activity
CY96_RS15755	COG0814	amino acid
CY96_RS15780	COG2188	Transcriptional regulator
CY96_RS15785	COG0673	inositol 2-dehydrogenase activity
CY96_RS15805	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS15825	COG0384	phenazine biosynthesis protein PhzF
CY96_RS15830	COG0318	PFAM AMP-dependent synthetase and ligase
CY96_RS15835	COG2249	NAD(P)H dehydrogenase (quinone) activity
CY96_RS15840	COG1733	regulation of RNA biosynthetic process
CY96_RS15865	COG1191	sigma factor activity
CY96_RS15920	COG1151	hydroxylamine reductase activity
CY96_RS15945	COG2072	flavoprotein involved in K transport
CY96_RS15980	COG1113	amino acid transport
CY96_RS15985	COG2814	Major facilitator Superfamily
CY96_RS16015	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CY96_RS16020	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CY96_RS16030	COG1247	-acetyltransferase
CY96_RS16035	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CY96_RS16040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CY96_RS16045	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CY96_RS16050	COG3739	integral membrane protein
CY96_RS16080	COG0583	DNA-binding transcription factor activity
CY96_RS16110	COG1193	negative regulation of DNA recombination
CY96_RS16125	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CY96_RS16130	COG1164	Oligoendopeptidase f
CY96_RS16135	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CY96_RS16160	COG0584	glycerophosphoryl diester phosphodiesterase
CY96_RS16175	COG0640	Transcriptional regulator
CY96_RS16180	COG0604	alcohol dehydrogenase
CY96_RS16190	COG0457	Tetratricopeptide repeat
CY96_RS16200	COG2808	Putative FMN-binding domain
CY96_RS16205	COG0456	acetyltransferase
CY96_RS16205	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CY96_RS16215	COG0277	FAD linked oxidase domain protein
CY96_RS16240	COG1183	phosphatidylcholine synthase activity
CY96_RS16250	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CY96_RS16250	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS16255	COG1252	NADH dehydrogenase
CY96_RS16265	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CY96_RS16275	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CY96_RS16285	COG0457	Tetratricopeptide repeat
CY96_RS16335	COG0488	(ABC) transporter
CY96_RS16360	COG3852	Histidine kinase
CY96_RS16370	COG1285	pathogenesis
CY96_RS16380	COG2514	catechol 2,3-dioxygenase activity
CY96_RS16385	COG2720	vancomycin resistance protein
CY96_RS16425	COG0716	FMN binding
CY96_RS16455	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS16465	COG0165	Argininosuccinate lyase
CY96_RS16480	COG4145	pantothenate transmembrane transporter activity
CY96_RS16490	COG1012	belongs to the aldehyde dehydrogenase family
CY96_RS16495	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS16505	COG1657	PFAM Prenyltransferase squalene oxidase
CY96_RS16510	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CY96_RS16515	COG2962	Rard protein
CY96_RS16520	COG3326	Membrane
CY96_RS16535	COG0489	protein tyrosine kinase activity
CY96_RS16545	COG0314	molybdopterin synthase activity
CY96_RS16550	COG0303	'Molybdopterin
CY96_RS16555	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CY96_RS16560	COG2116	formate transmembrane transporter activity
CY96_RS16570	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CY96_RS16575	COG5609	conserved protein (DUF2294)
CY96_RS16580	COG2427	Protein of unknown function (DUF1641)
CY96_RS16585	COG3383	formate dehydrogenase (NAD+) activity
CY96_RS16595	COG0697	spore germination
CY96_RS16610	COG0531	amino acid
CY96_RS16645	COG2226	methyltransferase
CY96_RS16650	COG4166	transmembrane transport
CY96_RS16655	COG4166	transmembrane transport
CY96_RS16660	COG4166	transmembrane transport
CY96_RS16665	COG1316	TRANSCRIPTIONal
CY96_RS16675	COG1595	DNA-templated transcription, initiation
CY96_RS16685	COG1131	(ABC) transporter
CY96_RS16695	COG0673	inositol 2-dehydrogenase activity
CY96_RS16700	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CY96_RS16705	COG0187	DNA topoisomerase II activity
CY96_RS16715	COG1832	CoA-binding protein
CY96_RS16720	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CY96_RS16725	COG0745	RESPONSE REGULATOR receiver
CY96_RS16745	COG4841	protein insertion into membrane
CY96_RS16750	COG0824	Thioesterase
CY96_RS16780	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CY96_RS16795	COG1132	(ABC) transporter
CY96_RS16800	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CY96_RS16830	COG2211	Major facilitator Superfamily
CY96_RS16840	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CY96_RS16855	COG0183	Belongs to the thiolase family
CY96_RS16860	COG0318	PFAM AMP-dependent synthetase and ligase
CY96_RS16865	COG1268	BioY protein
CY96_RS16870	COG0318	PFAM AMP-dependent synthetase and ligase
CY96_RS16875	COG1396	sequence-specific DNA binding
CY96_RS16915	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CY96_RS16925	COG5002	protein histidine kinase activity
CY96_RS16930	COG0400	carboxylic ester hydrolase activity
CY96_RS16935	COG0346	lactoylglutathione lyase activity
CY96_RS16945	COG0069	glutamate synthase activity
CY96_RS16950	COG1902	pentaerythritol trinitrate reductase activity
CY96_RS16955	COG1329	Transcriptional regulator
CY96_RS16960	COG0010	Belongs to the arginase family
CY96_RS16985	COG2226	methyltransferase
CY96_RS17015	COG4846	Membrane protein involved in cytochrome C biogenesis
CY96_RS17020	COG0785	Cytochrome C biogenesis protein
CY96_RS17030	COG1473	amidohydrolase
CY96_RS17040	COG1131	(ABC) transporter
CY96_RS17055	COG0583	DNA-binding transcription factor activity
CY96_RS17065	COG1346	cytolysis
CY96_RS17080	COG0730	response to heat
CY96_RS17105	COG1132	(ABC) transporter
CY96_RS17110	COG1132	(ABC) transporter
CY96_RS17145	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CY96_RS17150	COG0737	Belongs to the 5'-nucleotidase family
CY96_RS17160	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CY96_RS17180	COG1695	Transcriptional regulator
CY96_RS17215	COG0739	heme binding
CY96_RS17220	COG0741	lytic transglycosylase activity
CY96_RS17250	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CY96_RS17255	COG0174	glutamine synthetase
CY96_RS17260	COG0789	Transcriptional regulator
CY96_RS17265	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CY96_RS17270	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CY96_RS17275	COG2860	membrane
CY96_RS17280	COG0464	growth
CY96_RS17310	COG1388	LysM domain
CY96_RS17310	COG3584	3D domain protein
CY96_RS17315	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CY96_RS17315	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CY96_RS17315	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CY96_RS17320	COG1105	Belongs to the carbohydrate kinase PfkB family
CY96_RS17325	COG1349	DNA-binding transcription factor activity
CY96_RS17330	COG1979	alcohol dehydrogenase
CY96_RS17335	COG2322	membrane
CY96_RS17350	COG1113	amino acid transport
CY96_RS17360	COG1408	metallophosphoesterase
CY96_RS17365	COG2116	formate transmembrane transporter activity
CY96_RS17380	COG2217	Heavy metal translocating P-type atpase
CY96_RS17385	COG2608	mercury ion transmembrane transporter activity
CY96_RS17390	COG1937	Protein conserved in bacteria
CY96_RS17395	COG1464	Belongs to the NlpA lipoprotein family
CY96_RS17400	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
CY96_RS17405	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CY96_RS17410	COG2017	converts alpha-aldose to the beta-anomer
CY96_RS17415	COG2207	Transcriptional regulator
CY96_RS17420	COG5492	domain, Protein
CY96_RS17430	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CY96_RS17435	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CY96_RS17435	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CY96_RS17440	COG3716	PTS system mannose fructose sorbose family IID component
CY96_RS17445	COG3715	PTS system
CY96_RS17455	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS17460	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
CY96_RS17465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CY96_RS17475	COG1414	Transcriptional regulator
CY96_RS17485	COG2819	hydrolase of the alpha beta superfamily
CY96_RS17490	COG1120	ATPase activity
CY96_RS17495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CY96_RS17500	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CY96_RS17505	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CY96_RS17510	COG2169	Transcriptional regulator
CY96_RS17515	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CY96_RS17520	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CY96_RS17540	COG2267	carboxylic ester hydrolase activity
CY96_RS17545	COG3300	MHYT domain
CY96_RS17545	COG5001	Diguanylate cyclase
CY96_RS17565	COG1086	Polysaccharide biosynthesis protein
CY96_RS17585	COG1346	cytolysis
CY96_RS17595	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS17605	COG0823	Involved in the tonB-independent uptake of proteins
CY96_RS17610	COG1404	Belongs to the peptidase S8 family
CY96_RS17615	COG3773	Cell wall hydrolase
CY96_RS17625	COG1368	sulfuric ester hydrolase activity
CY96_RS17630	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CY96_RS17655	COG4550	Control of competence regulator ComK, YlbF/YmcA
CY96_RS17665	COG1013	pyruvate-flavodoxin oxidoreductase activity
CY96_RS17670	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CY96_RS17670	COG0674	pyruvate-flavodoxin oxidoreductase activity
CY96_RS17680	COG2359	stage V sporulation protein S
CY96_RS17685	COG1692	metallophosphoesterase
CY96_RS17710	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CY96_RS17715	COG1426	Protein conserved in bacteria
CY96_RS17730	COG0300	oxidoreductase activity
CY96_RS17735	COG0612	Peptidase, M16
CY96_RS17740	COG0612	Peptidase, M16
CY96_RS17745	COG1079	Belongs to the binding-protein-dependent transport system permease family
CY96_RS17750	COG4603	Belongs to the binding-protein-dependent transport system permease family
CY96_RS17755	COG3845	ABC transporter
CY96_RS17760	COG1744	ABC transporter substrate-binding protein PnrA-like
CY96_RS17765	COG2188	Transcriptional regulator
CY96_RS17780	COG0740	serine-type endopeptidase activity
CY96_RS17785	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CY96_RS17800	COG0527	aspartate kinase activity
CY96_RS17805	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CY96_RS17810	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CY96_RS17815	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CY96_RS17820	COG1873	PFAM PRC-barrel domain
CY96_RS17825	COG0612	Peptidase, M16
CY96_RS17830	COG0726	polysaccharide deacetylase
CY96_RS17845	COG0196	riboflavin kinase activity
CY96_RS17855	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CY96_RS17860	COG1550	Protein conserved in bacteria
CY96_RS17870	COG1358	cellular component organization or biogenesis
CY96_RS17875	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CY96_RS17880	COG0195	Participates in both transcription termination and antitermination
CY96_RS17900	COG0750	zinc metalloprotease
CY96_RS17910	COG4589	Belongs to the CDS family
CY96_RS17955	COG4974	Belongs to the 'phage' integrase family
CY96_RS17965	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CY96_RS17970	COG0758	DNA mediated transformation
CY96_RS17975	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CY96_RS18015	COG1837	Belongs to the UPF0109 family
CY96_RS18025	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CY96_RS18035	COG0552	protein localization to endoplasmic reticulum
CY96_RS18040	COG1196	nuclear chromosome segregation
CY96_RS18050	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CY96_RS18055	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS18060	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CY96_RS18075	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CY96_RS18080	COG1461	Dihydroxyacetone kinase
CY96_RS18085	COG1302	Protein conserved in bacteria
CY96_RS18100	COG1564	THIamine pyrophosphokinase
CY96_RS18105	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CY96_RS18115	COG2815	serine threonine protein kinase
CY96_RS18115	COG0515	serine threonine protein kinase
CY96_RS18120	COG0631	protein serine/threonine phosphatase activity
CY96_RS18130	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CY96_RS18130	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CY96_RS18145	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CY96_RS18150	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CY96_RS18170	COG1561	YicC-like family, N-terminal region
CY96_RS18175	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CY96_RS18185	COG0006	proline dipeptidase activity
CY96_RS18195	COG3069	C4-dicarboxylate transmembrane transporter activity
CY96_RS18205	COG0546	phosphoglycolate phosphatase activity
CY96_RS18260	COG0564	pseudouridine synthase activity
CY96_RS18280	COG3599	regulation of cell shape
CY96_RS18285	COG2302	S4 RNA-binding domain
CY96_RS18290	COG0762	integral membrane protein
CY96_RS18300	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CY96_RS18310	COG1873	PFAM PRC-barrel domain
CY96_RS18315	COG1191	sigma factor activity
CY96_RS18320	COG1191	sigma factor activity
CY96_RS18330	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CY96_RS18335	COG0849	cell division
CY96_RS18355	COG0772	Belongs to the SEDS family
CY96_RS18375	COG0768	penicillin binding
CY96_RS18380	COG0768	penicillin binding
CY96_RS18400	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CY96_RS18415	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CY96_RS18420	COG1399	metal-binding, possibly nucleic acid-binding protein
CY96_RS18430	COG3480	Lon protease (S16) C-terminal proteolytic domain
CY96_RS18435	COG1752	Esterase of the alpha-beta hydrolase superfamily
CY96_RS18440	COG3314	Sporulation integral membrane protein YlbJ
CY96_RS18450	COG0742	ribosomal rna small subunit methyltransferase
CY96_RS18465	COG3679	Belongs to the UPF0342 family
CY96_RS18470	COG0406	alpha-ribazole phosphatase activity
CY96_RS18485	COG2340	Cysteine-rich secretory protein family
CY96_RS18500	COG3336	cytochrome c oxidase
CY96_RS18535	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CY96_RS18540	COG0772	Belongs to the SEDS family
CY96_RS18550	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CY96_RS18555	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CY96_RS18565	COG4896	Protein conserved in bacteria
CY96_RS18580	COG1217	gtp-binding protein TYPA
CY96_RS18590	COG0483	inositol monophosphate 1-phosphatase activity
CY96_RS18610	COG1982	Orn Lys Arg decarboxylase major
CY96_RS18660	COG0022	dehydrogenase e1 component
CY96_RS18665	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CY96_RS18680	COG0561	phosphatase activity
CY96_RS18690	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CY96_RS18695	COG0569	domain protein
CY96_RS18715	COG0583	DNA-binding transcription factor activity
CY96_RS18720	COG0517	IMP dehydrogenase activity
CY96_RS18730	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
CY96_RS18740	COG4703	Protein of unknown function (DUF1797)
CY96_RS18755	COG2200	EAL domain
CY96_RS18760	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS18765	COG1408	metallophosphoesterase
CY96_RS18810	COG2814	Major facilitator Superfamily
CY96_RS18835	COG3209	COG3209 Rhs family protein
CY96_RS18845	COG2205	protein histidine kinase activity
CY96_RS18855	COG0436	Aminotransferase
CY96_RS18860	COG1609	Transcriptional regulator
CY96_RS18865	COG3833	ABC-type maltose transport systems, permease component
CY96_RS18870	COG1175	transmembrane transport
CY96_RS18875	COG2182	Extracellular solute-binding protein
CY96_RS18885	COG0366	Alpha amylase catalytic
CY96_RS18890	COG3842	ATPase activity
CY96_RS18930	COG0183	Belongs to the thiolase family
CY96_RS18965	COG1695	Transcriptional regulator
CY96_RS18970	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS18990	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CY96_RS18995	COG0436	Aminotransferase
CY96_RS19030	COG2084	Dehydrogenase
CY96_RS19040	COG2199	diguanylate cyclase activity
CY96_RS19045	COG0778	Nitroreductase
CY96_RS19070	COG2190	(PTS) system
CY96_RS19070	COG1263	PTS System
CY96_RS19070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CY96_RS19075	COG3711	transcriptional antiterminator
CY96_RS19085	COG2188	Transcriptional regulator
CY96_RS19095	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CY96_RS19125	COG1547	Domain of unknown function (DUF309)
CY96_RS19130	COG0456	acetyltransferase
CY96_RS19135	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CY96_RS19140	COG4086	secreted protein
CY96_RS19145	COG0561	phosphatase activity
CY96_RS19150	COG0697	spore germination
CY96_RS19165	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CY96_RS19190	COG0733	neurotransmitter:sodium symporter activity
CY96_RS19210	COG1686	Belongs to the peptidase S11 family
CY96_RS19215	COG1725	Transcriptional regulator
CY96_RS19220	COG1131	(ABC) transporter
CY96_RS19235	COG1846	Transcriptional regulator
CY96_RS19250	COG0598	Magnesium transport protein CorA
CY96_RS19275	COG4974	Belongs to the 'phage' integrase family
CY96_RS19285	COG0735	belongs to the Fur family
CY96_RS19290	COG1300	Membrane
CY96_RS19310	COG0667	Aldo Keto reductase
CY96_RS19315	COG0656	L-ascorbic acid biosynthetic process
CY96_RS19320	COG0456	acetyltransferase
CY96_RS19320	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CY96_RS19330	COG1525	nuclease
CY96_RS19330	COG4085	toxin activity
CY96_RS19330	COG0737	Belongs to the 5'-nucleotidase family
CY96_RS19340	COG0596	Alpha beta hydrolase
CY96_RS19345	COG2056	Na+-H+ antiporter family
CY96_RS19350	COG1609	Transcriptional regulator
CY96_RS19355	COG0456	acetyltransferase
CY96_RS19360	COG1073	alpha beta
CY96_RS19375	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CY96_RS19375	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CY96_RS19380	COG0307	riboflavin synthase, alpha
CY96_RS19410	COG2226	methyltransferase
CY96_RS19410	COG1073	alpha beta
CY96_RS19425	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CY96_RS19435	COG1757	Na H antiporter
CY96_RS19440	COG0737	Belongs to the 5'-nucleotidase family
CY96_RS19450	COG1522	sequence-specific DNA binding
CY96_RS19495	COG0300	oxidoreductase activity
CY96_RS19500	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS19505	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CY96_RS19510	COG1760	l-serine dehydratase
CY96_RS19515	COG1760	l-serine dehydratase
CY96_RS19550	COG2195	Cleaves the N-terminal amino acid of tripeptides
CY96_RS19555	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS19570	COG1376	ErfK ybiS ycfS ynhG family protein
CY96_RS19575	COG4129	membrane
CY96_RS19580	COG1126	abc transporter atp-binding protein
CY96_RS19585	COG0765	amino acid transport
CY96_RS19590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CY96_RS19610	COG2323	membrane
CY96_RS19615	COG0772	Belongs to the SEDS family
CY96_RS19625	COG0508	dehydrogenase complex catalyzes the overall conversion of
CY96_RS19630	COG0022	dehydrogenase e1 component
CY96_RS19635	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CY96_RS19640	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CY96_RS19655	COG0280	phosphate acetyltransferase
CY96_RS19665	COG3829	transcription factor binding
CY96_RS19665	COG3290	protein histidine kinase activity
CY96_RS19675	COG0584	glycerophosphoryl diester phosphodiesterase
CY96_RS19680	COG3093	addiction module antidote protein HigA
CY96_RS19780	COG0750	zinc metalloprotease
CY96_RS19785	COG0497	DNA recombination
CY96_RS19795	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CY96_RS19805	COG0142	geranyltranstransferase activity
CY96_RS19830	COG1302	Protein conserved in bacteria
CY96_RS19835	COG0439	Biotin carboxylase
CY96_RS19840	COG0511	ligase activity, forming carbon-carbon bonds
CY96_RS19885	COG3854	ATPases associated with a variety of cellular activities
CY96_RS19910	COG0006	proline dipeptidase activity
CY96_RS19925	COG3872	metal-dependent enzyme
CY96_RS19935	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CY96_RS19965	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CY96_RS19975	COG1609	Transcriptional regulator
CY96_RS19985	COG2076	Multidrug Resistance protein
CY96_RS19990	COG2076	Multidrug Resistance protein
CY96_RS20030	COG1725	Transcriptional regulator
CY96_RS20060	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CY96_RS20125	COG1459	type II secretion system
CY96_RS20130	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CY96_RS20185	COG0646	methionine synthase
CY96_RS20185	COG1410	methionine synthase
CY96_RS20190	COG0646	methionine synthase
CY96_RS20190	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CY96_RS20200	COG0626	cystathionine gamma-synthase activity
CY96_RS20205	COG0626	cystathionine gamma-synthase activity
CY96_RS20225	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS20235	COG1940	carbohydrate kinase activity
CY96_RS20240	COG4483	Protein conserved in bacteria
CY96_RS20245	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CY96_RS20250	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CY96_RS20255	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CY96_RS20260	COG0704	Plays a role in the regulation of phosphate uptake
CY96_RS20270	COG0573	inorganic phosphate transmembrane transporter activity
CY96_RS20275	COG0573	inorganic phosphate transmembrane transporter activity
CY96_RS20285	COG0768	penicillin binding
CY96_RS20290	COG0477	Major facilitator Superfamily
CY96_RS20295	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CY96_RS20305	COG5521	maltodextrose utilization protein MalA
CY96_RS20320	COG0735	belongs to the Fur family
CY96_RS20325	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CY96_RS20330	COG1121	(ABC) transporter
CY96_RS20335	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CY96_RS20365	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CY96_RS20370	COG2384	SAM-dependent methyltransferase
CY96_RS20380	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CY96_RS20385	COG0358	DNA primase activity
CY96_RS20400	COG0517	IMP dehydrogenase activity
CY96_RS20415	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CY96_RS20420	COG0295	cytidine deaminase activity
CY96_RS20425	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CY96_RS20435	COG1480	7TM receptor with intracellular HD hydrolase
CY96_RS20440	COG1702	phosphate starvation-inducible protein PhoH
CY96_RS20460	COG1610	YqeY-like protein
CY96_RS20465	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CY96_RS20470	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CY96_RS20475	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CY96_RS20505	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CY96_RS20510	COG1733	regulation of RNA biosynthetic process
CY96_RS20535	COG1466	dna polymerase III delta subunit
CY96_RS20545	COG0658	competence protein
CY96_RS20545	COG2333	competence protein COMEC
CY96_RS20550	COG2131	deaminase
CY96_RS20555	COG1596	polysaccharide export
CY96_RS20555	COG1555	photosystem II stabilization
CY96_RS20560	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CY96_RS20565	COG2226	methyltransferase
CY96_RS20570	COG0799	negative regulation of ribosome biogenesis
CY96_RS20575	COG1713	HD superfamily hydrolase involved in NAD metabolism
CY96_RS20585	COG1534	Rna-binding protein
CY96_RS20595	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CY96_RS20600	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CY96_RS20625	COG1595	DNA-templated transcription, initiation
CY96_RS20635	COG0778	Nitroreductase
CY96_RS20640	COG2357	RelA SpoT domain protein
CY96_RS20650	COG1785	Belongs to the alkaline phosphatase family
CY96_RS20660	COG2267	carboxylic ester hydrolase activity
CY96_RS20695	COG1404	Belongs to the peptidase S8 family
CY96_RS20700	COG3186	Phenylalanine-4-hydroxylase
CY96_RS20710	COG2514	catechol 2,3-dioxygenase activity
CY96_RS20715	COG2259	Doxx family
CY96_RS20755	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CY96_RS20765	COG1454	alcohol dehydrogenase
CY96_RS20765	COG1012	belongs to the aldehyde dehydrogenase family
CY96_RS20770	COG0626	cystathionine gamma-synthase activity
CY96_RS20775	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CY96_RS20800	COG0768	penicillin binding
CY96_RS20820	COG0826	peptidase U32
CY96_RS20825	COG0826	peptidase U32
CY96_RS20830	COG4122	O-methyltransferase activity
CY96_RS20835	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CY96_RS20865	COG0628	permease
CY96_RS20885	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CY96_RS20900	COG1104	cysteine desulfurase activity
CY96_RS20905	COG1959	2 iron, 2 sulfur cluster binding
CY96_RS20910	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CY96_RS20930	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CY96_RS20955	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CY96_RS20965	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CY96_RS20965	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CY96_RS20970	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CY96_RS20975	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CY96_RS20975	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CY96_RS20985	COG2244	polysaccharide biosynthetic process
CY96_RS20990	COG2323	membrane
CY96_RS21000	COG1862	Preprotein translocase
CY96_RS21030	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CY96_RS21060	COG0157	Belongs to the NadC ModD family
CY96_RS21065	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CY96_RS21070	COG1104	cysteine desulfurase activity
CY96_RS21075	COG1827	regulation of RNA biosynthetic process
CY96_RS21080	COG2258	MOSC domain
CY96_RS21090	COG0077	Prephenate dehydratase
CY96_RS21095	COG0577	efflux transmembrane transporter activity
CY96_RS21100	COG0577	efflux transmembrane transporter activity
CY96_RS21105	COG1136	(ABC) transporter
CY96_RS21110	COG5002	protein histidine kinase activity
CY96_RS21115	COG0745	RESPONSE REGULATOR receiver
CY96_RS21125	COG3290	protein histidine kinase activity
CY96_RS21135	COG2868	ribosomal protein
CY96_RS21145	COG1530	ribonuclease E activity
CY96_RS21150	COG1994	Peptidase M50
CY96_RS21155	COG0739	heme binding
CY96_RS21160	COG2894	cell division
CY96_RS21180	COG1077	Cell shape determining protein MreB Mrl
CY96_RS21200	COG0285	dihydrofolate synthase activity
CY96_RS21215	COG1388	LysM domain
CY96_RS21225	COG0113	porphobilinogen synthase activity
CY96_RS21230	COG1587	Uroporphyrinogen-III synthase
CY96_RS21240	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CY96_RS21250	COG1846	Transcriptional regulator
CY96_RS21255	COG1764	response to oxidative stress
CY96_RS21270	COG0470	DNA polymerase III
CY96_RS21270	COG1067	ATP-dependent peptidase activity
CY96_RS21305	COG0457	Tetratricopeptide repeat
CY96_RS21330	COG0622	Phosphoesterase
CY96_RS21345	COG5401	PFAM Sporulation and spore germination
CY96_RS21360	COG2197	response regulator
CY96_RS21365	COG2233	PERMEase
CY96_RS21370	COG0402	S-adenosylhomocysteine deaminase activity
CY96_RS21375	COG1983	PspC domain protein
CY96_RS21380	COG1396	sequence-specific DNA binding
CY96_RS21385	COG0697	spore germination
CY96_RS21395	COG1959	2 iron, 2 sulfur cluster binding
CY96_RS21400	COG1668	transmembrane transport
CY96_RS21405	COG4152	abc transporter atp-binding protein
CY96_RS21410	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CY96_RS21415	COG1360	Flagellar Motor Protein
CY96_RS21420	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CY96_RS21425	COG1876	peptidase activity
CY96_RS21430	COG0824	Thioesterase
CY96_RS21435	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CY96_RS21440	COG1053	succinate dehydrogenase
CY96_RS21445	COG2009	succinate dehydrogenase
CY96_RS21450	COG1719	4-vinyl reductase, 4VR
CY96_RS21460	COG3118	belongs to the thioredoxin family
CY96_RS21465	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CY96_RS21470	COG2086	electron transfer activity
CY96_RS21475	COG1024	Enoyl-CoA hydratase
CY96_RS21480	COG1309	transcriptional regulator
CY96_RS21485	COG0318	PFAM AMP-dependent synthetase and ligase
CY96_RS21510	COG2318	DinB family
CY96_RS21540	COG1131	(ABC) transporter
CY96_RS21545	COG2205	protein histidine kinase activity
CY96_RS21550	COG0745	RESPONSE REGULATOR receiver
CY96_RS21560	COG4895	conserved protein (DUF2196)
CY96_RS21565	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CY96_RS21575	COG4509	Sortase family
CY96_RS21580	COG1120	ATPase activity
CY96_RS21595	COG5386	Cell surface protein
CY96_RS21605	COG5386	Cell surface protein
CY96_RS21610	COG1114	Component of the transport system for branched-chain amino acids
CY96_RS21615	COG1187	pseudouridine synthase activity
CY96_RS21630	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CY96_RS21630	COG1796	DNA polymerase
CY96_RS21635	COG1286	toxin biosynthetic process
CY96_RS21680	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CY96_RS21690	COG1418	mRNA catabolic process
CY96_RS21710	COG2814	Major facilitator Superfamily
CY96_RS21715	COG1566	PFAM secretion protein HlyD family protein
CY96_RS21720	COG1309	transcriptional regulator
CY96_RS21725	COG1363	Peptidase, m42
CY96_RS21750	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CY96_RS21765	COG1484	DNA-dependent DNA replication
CY96_RS21770	COG3611	Membrane attachment protein
CY96_RS21780	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CY96_RS21785	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CY96_RS21795	COG1971	Probably functions as a manganese efflux pump
CY96_RS21805	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CY96_RS21805	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CY96_RS21810	COG5002	protein histidine kinase activity
CY96_RS21815	COG0745	RESPONSE REGULATOR receiver
CY96_RS21830	COG0538	isocitrate dehydrogenase activity
CY96_RS21835	COG0372	Belongs to the citrate synthase family
CY96_RS21850	COG0628	permease
CY96_RS21855	COG3030	protein affecting phage T7 exclusion by the F plasmid
CY96_RS21880	COG1725	Transcriptional regulator
CY96_RS21885	COG0281	malic enzyme
CY96_RS21890	COG0587	DNA-directed DNA polymerase activity
CY96_RS21905	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CY96_RS21920	COG4109	DRTGG domain
CY96_RS21935	COG0006	proline dipeptidase activity
CY96_RS21965	COG0662	Cupin 2, conserved barrel domain protein
CY96_RS21980	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS21985	COG0589	response to stress
CY96_RS22020	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CY96_RS22045	COG0827	DNA restriction-modification system
CY96_RS22050	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CY96_RS22055	COG3874	Sporulation protein YtfJ
CY96_RS22070	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CY96_RS22080	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CY96_RS22095	COG1104	cysteine desulfurase activity
CY96_RS22105	COG0583	DNA-binding transcription factor activity
CY96_RS22110	COG0697	spore germination
CY96_RS22115	COG1309	transcriptional regulator
CY96_RS22120	COG1956	GAF domain-containing protein
CY96_RS22125	COG0626	cystathionine gamma-synthase activity
CY96_RS22165	COG1595	DNA-templated transcription, initiation
CY96_RS22175	COG0110	maltose O-acetyltransferase activity
CY96_RS22180	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CY96_RS22185	COG0454	-acetyltransferase
CY96_RS22190	COG0517	IMP dehydrogenase activity
CY96_RS22195	COG0123	including yeast histone deacetylase and acetoin utilization protein
CY96_RS22210	COG0745	RESPONSE REGULATOR receiver
CY96_RS22220	COG0666	response to abiotic stimulus
CY96_RS22245	COG1609	Transcriptional regulator
CY96_RS22255	COG1605	Chorismate mutase
CY96_RS22255	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CY96_RS22260	COG4851	CamS sex pheromone cAM373 precursor
CY96_RS22265	COG3118	belongs to the thioredoxin family
CY96_RS22275	COG2309	aminopeptidase activity
CY96_RS22290	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS22305	COG1674	ftsk spoiiie
CY96_RS22320	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CY96_RS22330	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CY96_RS22335	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CY96_RS22340	COG1363	Peptidase, m42
CY96_RS22350	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS22365	COG0510	thiamine kinase activity
CY96_RS22370	COG1523	belongs to the glycosyl hydrolase 13 family
CY96_RS22380	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CY96_RS22385	COG1349	DNA-binding transcription factor activity
CY96_RS22390	COG1187	pseudouridine synthase activity
CY96_RS22395	COG2244	polysaccharide biosynthetic process
CY96_RS22400	COG2081	HI0933 family
CY96_RS22405	COG2814	Major facilitator Superfamily
CY96_RS22415	COG3832	glyoxalase III activity
CY96_RS22435	COG1329	Transcriptional regulator
CY96_RS22460	COG0314	molybdopterin synthase activity
CY96_RS22465	COG1763	Mo-molybdopterin cofactor biosynthetic process
CY96_RS22470	COG0303	'Molybdopterin
CY96_RS22480	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CY96_RS22485	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CY96_RS22505	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CY96_RS22515	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CY96_RS22560	COG2814	Major facilitator Superfamily
CY96_RS22565	COG0475	glutathione-regulated potassium exporter activity
CY96_RS22570	COG0490	domain, Protein
CY96_RS22575	COG0582	viral genome integration into host DNA
CY96_RS22585	COG1136	(ABC) transporter
CY96_RS22605	COG1242	4 iron, 4 sulfur cluster binding
CY96_RS22610	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CY96_RS22615	COG1794	racemase activity, acting on amino acids and derivatives
CY96_RS22645	COG2267	carboxylic ester hydrolase activity
CY96_RS22650	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CY96_RS22655	COG0671	phosphoesterase, PA-phosphatase related
CY96_RS22660	COG0438	transferase activity, transferring glycosyl groups
CY96_RS22685	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS22730	COG5002	protein histidine kinase activity
CY96_RS22735	COG3852	Histidine kinase
CY96_RS22740	COG2267	carboxylic ester hydrolase activity
CY96_RS22745	COG1368	sulfuric ester hydrolase activity
CY96_RS22765	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CY96_RS22770	COG1116	anion transmembrane transporter activity
CY96_RS22775	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CY96_RS22800	COG0494	nUDIX hydrolase
CY96_RS22830	COG2076	Multidrug Resistance protein
CY96_RS22840	COG0789	Transcriptional regulator
CY96_RS22845	COG1854	S-ribosylhomocysteine lyase activity
CY96_RS22855	COG0288	reversible hydration of carbon dioxide
CY96_RS22860	COG1271	oxidase subunit
CY96_RS22865	COG1294	oxidase, subunit
CY96_RS22880	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CY96_RS22900	COG1842	Phage shock protein A
CY96_RS22925	COG3859	Proton-coupled thiamine transporter YuaJ
CY96_RS22930	COG5002	protein histidine kinase activity
CY96_RS22935	COG0745	RESPONSE REGULATOR receiver
CY96_RS22960	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CY96_RS22965	COG1597	lipid kinase activity
CY96_RS23000	COG0586	Pfam SNARE associated Golgi protein
CY96_RS23010	COG0577	efflux transmembrane transporter activity
CY96_RS23015	COG1136	(ABC) transporter
CY96_RS23020	COG3708	Transcriptional regulator
CY96_RS23020	COG2207	Transcriptional regulator
CY96_RS23030	COG1131	(ABC) transporter
CY96_RS23035	COG5658	integral membrane protein
CY96_RS23040	COG0640	Transcriptional regulator
CY96_RS23045	COG0745	RESPONSE REGULATOR receiver
CY96_RS23050	COG2205	protein histidine kinase activity
CY96_RS23055	COG0577	efflux transmembrane transporter activity
CY96_RS23060	COG0577	efflux transmembrane transporter activity
CY96_RS23065	COG1136	(ABC) transporter
CY96_RS23070	COG0577	efflux transmembrane transporter activity
CY96_RS23085	COG2188	Transcriptional regulator
CY96_RS23105	COG3964	amidohydrolase
CY96_RS23125	COG4948	Mandelate Racemase Muconate Lactonizing
CY96_RS23135	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CY96_RS23140	COG0596	Alpha beta hydrolase
CY96_RS23150	COG1169	isochorismate synthase
CY96_RS23155	COG1575	Belongs to the MenA family. Type 1 subfamily
CY96_RS23160	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CY96_RS23190	COG0058	SHG alpha-glucan phosphorylase activity
CY96_RS23200	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CY96_RS23315	COG0544	peptidyl-prolyl cis-trans isomerase activity
CY96_RS23350	COG1285	pathogenesis
CY96_RS23355	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CY96_RS23375	COG2155	Conserved Protein
CY96_RS23380	COG1098	S1 RNA binding domain
CY96_RS23385	COG0436	Aminotransferase
CY96_RS23390	COG1522	sequence-specific DNA binding
CY96_RS23395	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CY96_RS23400	COG2267	carboxylic ester hydrolase activity
CY96_RS23410	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CY96_RS23430	COG5018	Exonuclease
CY96_RS23435	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CY96_RS23455	COG2050	protein possibly involved in aromatic compounds catabolism
CY96_RS23465	COG1268	BioY protein
CY96_RS23470	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CY96_RS23475	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CY96_RS23490	COG3584	3D domain protein
CY96_RS23505	COG1252	NADH dehydrogenase
CY96_RS23520	COG3708	Transcriptional regulator
CY96_RS23535	COG1683	Conserved Protein
CY96_RS23545	COG0316	Belongs to the HesB IscA family
CY96_RS23560	COG1252	NADH dehydrogenase
CY96_RS23570	COG2274	protein secretion by the type I secretion system
CY96_RS23575	COG0390	transport system, permease component
CY96_RS23580	COG2824	Alkylphosphonate utilization operon protein PhnA
CY96_RS23635	COG4837	Protein of unknown function (DUF1462)
CY96_RS23640	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CY96_RS23655	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CY96_RS23660	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CY96_RS23680	COG1358	cellular component organization or biogenesis
CY96_RS23690	COG2249	NAD(P)H dehydrogenase (quinone) activity
CY96_RS23695	COG0647	UMP catabolic process
CY96_RS23705	COG2445	Protein of unknown function DUF86
CY96_RS23710	COG1494	fructose-1,6-bisphosphatase
CY96_RS23730	COG4470	Protein conserved in bacteria
CY96_RS23740	COG0789	Transcriptional regulator
CY96_RS23745	COG4377	Putative membrane peptidase family (DUF2324)
CY96_RS23770	COG0739	heme binding
CY96_RS23780	COG3377	Domain of unknown function (DUF1805)
CY96_RS23785	COG0737	Belongs to the 5'-nucleotidase family
CY96_RS23790	COG0719	Fe-S assembly protein
CY96_RS23795	COG0822	iron-sulfur transferase activity
CY96_RS23800	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CY96_RS23805	COG0719	Fe-S assembly protein
CY96_RS23810	COG0396	ATPase activity
CY96_RS23815	COG1464	Belongs to the NlpA lipoprotein family
CY96_RS23820	COG2011	ABC-type metal ion transport system permease component
CY96_RS23835	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CY96_RS23840	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CY96_RS23850	COG1393	Belongs to the ArsC family
CY96_RS23870	COG0039	L-malate dehydrogenase activity
CY96_RS23885	COG1309	transcriptional regulator
CY96_RS23890	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CY96_RS23895	COG1960	acyl-CoA dehydrogenase activity
CY96_RS23900	COG0183	Belongs to the thiolase family
CY96_RS23905	COG1250	3-hydroxyacyl-CoA dehydrogenase
CY96_RS23905	COG1024	Enoyl-CoA hydratase
CY96_RS23915	COG1686	Belongs to the peptidase S11 family
CY96_RS23930	COG0011	TIGRFAM Protein of
CY96_RS23935	COG0840	transmembrane signaling receptor activity
CY96_RS23950	COG2814	Major facilitator Superfamily
CY96_RS23955	COG0531	amino acid
CY96_RS23980	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CY96_RS24015	COG0586	Pfam SNARE associated Golgi protein
CY96_RS24025	COG1376	ErfK ybiS ycfS ynhG family protein
CY96_RS24030	COG0745	RESPONSE REGULATOR receiver
CY96_RS24035	COG5002	protein histidine kinase activity
CY96_RS24065	COG0840	transmembrane signaling receptor activity
CY96_RS24070	COG2151	metal-sulfur cluster biosynthetic enzyme
CY96_RS24075	COG3227	Zinc metalloprotease (Elastase)
CY96_RS24080	COG1741	Belongs to the pirin family
CY96_RS24095	COG0586	Pfam SNARE associated Golgi protein
CY96_RS24100	COG0475	glutathione-regulated potassium exporter activity
CY96_RS24105	COG0490	domain, Protein
CY96_RS24115	COG1115	amino acid carrier protein
CY96_RS24120	COG0783	Belongs to the Dps family
CY96_RS24140	COG1611	Belongs to the LOG family
CY96_RS24150	COG1528	Iron-storage protein
CY96_RS24155	COG2311	Membrane
CY96_RS24160	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CY96_RS24165	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CY96_RS24170	COG1115	amino acid carrier protein
CY96_RS24175	COG1115	amino acid carrier protein
CY96_RS24180	COG2910	NAD(P)H-binding
CY96_RS24195	COG0656	L-ascorbic acid biosynthetic process
CY96_RS24200	COG2814	Major facilitator Superfamily
CY96_RS24205	COG1733	regulation of RNA biosynthetic process
CY96_RS24215	COG1252	NADH dehydrogenase
CY96_RS24235	COG3290	protein histidine kinase activity
CY96_RS24235	COG0840	transmembrane signaling receptor activity
CY96_RS24270	COG0488	(ABC) transporter
CY96_RS24275	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS24325	COG0745	RESPONSE REGULATOR receiver
CY96_RS24340	COG0557	exoribonuclease II activity
CY96_RS24345	COG1647	Serine aminopeptidase, S33
CY96_RS24350	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CY96_RS24355	COG1346	cytolysis
CY96_RS24390	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CY96_RS24405	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CY96_RS24415	COG1668	transmembrane transport
CY96_RS24420	COG4152	abc transporter atp-binding protein
CY96_RS24425	COG4585	Histidine kinase
CY96_RS24455	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CY96_RS24470	COG2323	membrane
CY96_RS24485	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CY96_RS24495	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CY96_RS24505	COG1051	belongs to the nudix hydrolase family
CY96_RS24515	COG0492	ferredoxin-NADP+ reductase activity
CY96_RS24520	COG0457	Tetratricopeptide repeat
CY96_RS24525	COG0110	maltose O-acetyltransferase activity
CY96_RS24545	COG1950	PFAM Membrane protein of
CY96_RS24555	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CY96_RS24560	COG0556	nucleotide-excision repair
CY96_RS24575	COG0789	Transcriptional regulator
CY96_RS24595	COG0583	DNA-binding transcription factor activity
CY96_RS24605	COG0655	NAD(P)H dehydrogenase (quinone) activity
CY96_RS24610	COG0488	(ABC) transporter
CY96_RS24620	COG1132	(ABC) transporter
CY96_RS24625	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CY96_RS24630	COG0793	Belongs to the peptidase S41A family
CY96_RS24630	COG3409	Peptidoglycan-binding domain 1 protein
CY96_RS24635	COG2177	Part of the ABC transporter FtsEX involved in
CY96_RS24640	COG2884	Cell division ATP-binding protein ftsE
CY96_RS24670	COG1131	(ABC) transporter
CY96_RS24700	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CY96_RS24705	COG1278	Cold shock
CY96_RS24710	COG1040	competence protein
CY96_RS24715	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CY96_RS24720	COG1388	LysM domain
CY96_RS24720	COG0791	NLP P60 protein
CY96_RS24725	COG1733	regulation of RNA biosynthetic process
CY96_RS24730	COG1307	EDD domain protein, DegV family
CY96_RS24735	COG1739	Uncharacterized protein family UPF0029
CY96_RS24740	COG1316	TRANSCRIPTIONal
CY96_RS24745	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CY96_RS24750	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CY96_RS24755	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CY96_RS24765	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CY96_RS24765	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CY96_RS24785	COG1486	melibiose metabolic process
CY96_RS24790	COG1447	Phosphotransferase system cellobiose-specific component IIA
CY96_RS24795	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CY96_RS24805	COG1447	Phosphotransferase system cellobiose-specific component IIA
CY96_RS24815	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CY96_RS24820	COG1301	dicarboxylic acid transport
CY96_RS24835	COG1511	domain protein
CY96_RS24840	COG0583	DNA-binding transcription factor activity
CY96_RS24845	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CY96_RS24855	COG1271	oxidase subunit
CY96_RS24860	COG1294	oxidase, subunit
CY96_RS24865	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CY96_RS24875	COG1620	l-lactate permease
CY96_RS24885	COG2389	metal-binding protein
CY96_RS24895	COG1368	sulfuric ester hydrolase activity
CY96_RS24905	COG1388	LysM domain
CY96_RS24905	COG0791	NLP P60 protein
CY96_RS24910	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CY96_RS24920	COG1215	transferase activity, transferring glycosyl groups
CY96_RS24930	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CY96_RS24935	COG3584	3D domain protein
CY96_RS24935	COG1388	LysM domain
CY96_RS24960	COG4715	Zinc finger, swim domain protein
CY96_RS24965	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CY96_RS25005	COG0577	efflux transmembrane transporter activity
CY96_RS25010	COG1136	(ABC) transporter
CY96_RS25045	COG5002	protein histidine kinase activity
CY96_RS25050	COG0745	RESPONSE REGULATOR receiver
CY96_RS25055	COG1482	cell wall glycoprotein biosynthetic process
CY96_RS25060	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CY96_RS25060	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CY96_RS25060	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CY96_RS25065	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CY96_RS25065	COG3711	transcriptional antiterminator
CY96_RS25070	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CY96_RS25085	COG1482	cell wall glycoprotein biosynthetic process
CY96_RS25090	COG0662	Cupin 2, conserved barrel domain protein
CY96_RS25090	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CY96_RS25105	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CY96_RS25135	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CY96_RS25140	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CY96_RS25145	COG4464	protein tyrosine phosphatase activity
CY96_RS25150	COG0489	protein tyrosine kinase activity
CY96_RS25155	COG3944	biosynthesis protein
CY96_RS25160	COG0489	protein tyrosine kinase activity
CY96_RS25175	COG1609	Transcriptional regulator
CY96_RS25185	COG0739	heme binding
CY96_RS25200	COG3279	Response regulator of the LytR AlgR family
CY96_RS25215	COG2385	sporulation resulting in formation of a cellular spore
CY96_RS25230	COG4836	Membrane
CY96_RS25235	COG1007	ATP synthesis coupled electron transport
CY96_RS25240	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CY96_RS25245	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CY96_RS25255	COG0839	Belongs to the complex I subunit 6 family
CY96_RS25275	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CY96_RS25290	COG5001	Diguanylate cyclase
CY96_RS25290	COG3300	MHYT domain
CY96_RS25340	COG0356	it plays a direct role in the translocation of protons across the membrane
CY96_RS25375	COG0698	ribose 5-phosphate isomerase
CY96_RS25390	COG2259	Doxx family
CY96_RS25395	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CY96_RS25410	COG0009	L-threonylcarbamoyladenylate synthase
CY96_RS25445	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CY96_RS25455	COG1494	fructose-1,6-bisphosphatase
CY96_RS25475	COG4821	SIS domain
CY96_RS25485	COG3343	RNA polymerase activity
CY96_RS25495	COG1960	acyl-CoA dehydrogenase activity
CY96_RS25500	COG1960	acyl-CoA dehydrogenase activity
CY96_RS25505	COG1250	3-hydroxyacyl-CoA dehydrogenase
CY96_RS25510	COG0183	Belongs to the thiolase family
CY96_RS25515	COG0247	lactate metabolic process
CY96_RS25515	COG2181	nitrate reductase activity
CY96_RS25520	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CY96_RS25530	COG5001	Diguanylate cyclase
CY96_RS25530	COG3300	MHYT domain
CY96_RS25545	COG3227	Zinc metalloprotease (Elastase)
CY96_RS25550	COG2197	response regulator
CY96_RS25555	COG4585	Histidine kinase
CY96_RS25560	COG0842	Transport permease protein
CY96_RS25565	COG1131	(ABC) transporter
CY96_RS25570	COG0024	Methionine aminopeptidase
CY96_RS25580	COG2234	aminopeptidase activity
CY96_RS25600	COG1595	DNA-templated transcription, initiation
CY96_RS25610	COG4506	Protein conserved in bacteria
CY96_RS25615	COG1619	proteins homologs of microcin C7 resistance protein MccF
CY96_RS25640	COG2814	Major facilitator Superfamily
CY96_RS25645	COG0789	Transcriptional regulator
CY96_RS25650	COG0584	glycerophosphoryl diester phosphodiesterase
CY96_RS25655	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CY96_RS25665	COG1994	Peptidase M50
CY96_RS25675	COG1078	dGTPase activity
CY96_RS25680	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CY96_RS25685	COG1120	ATPase activity
CY96_RS25690	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CY96_RS25695	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CY96_RS25715	COG0280	phosphate acetyltransferase
CY96_RS25730	COG3773	Cell wall hydrolase
CY96_RS25740	COG2363	Small membrane protein
CY96_RS25750	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CY96_RS25755	COG2233	PERMEase
CY96_RS25760	COG0561	phosphatase activity
CY96_RS25765	COG2814	Major facilitator Superfamily
CY96_RS25775	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CY96_RS25780	COG1131	(ABC) transporter
CY96_RS25785	COG2755	lipolytic protein G-D-S-L family
CY96_RS25790	COG1609	Transcriptional regulator
CY96_RS25800	COG0460	homoserine dehydrogenase
CY96_RS25810	COG2873	o-acetylhomoserine
CY96_RS25820	COG1011	Hydrolase
CY96_RS25825	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CY96_RS25835	COG2197	response regulator
CY96_RS25840	COG2203	Gaf domain
CY96_RS25840	COG4585	Histidine kinase
CY96_RS25845	COG0351	phosphomethylpyrimidine kinase
CY96_RS25850	COG3706	GGDEF domain
CY96_RS25855	COG2879	small protein
CY96_RS25860	COG1966	Carbon starvation protein
CY96_RS25865	COG3279	Response regulator of the LytR AlgR family
CY96_RS25870	COG0477	Major facilitator Superfamily
CY96_RS25880	COG0438	transferase activity, transferring glycosyl groups
CY96_RS25895	COG0840	transmembrane signaling receptor activity
CY96_RS25905	COG1607	acyl-coa hydrolase
CY96_RS25910	COG1216	Glycosyl transferase, family 2
CY96_RS25925	COG1216	Glycosyl transferase, family 2
CY96_RS25935	COG4485	Bacterial membrane protein, YfhO
CY96_RS25940	COG0463	Glycosyl transferase, family 2
CY96_RS25945	COG0488	(ABC) transporter
CY96_RS25950	COG1309	transcriptional regulator
CY96_RS25955	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CY96_RS25960	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CY96_RS25960	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CY96_RS25965	COG0628	permease
CY96_RS25985	COG3275	phosphorelay sensor kinase activity
CY96_RS25990	COG2814	Major facilitator Superfamily
CY96_RS25995	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CY96_RS26000	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
CY96_RS26020	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CY96_RS26025	COG1272	protein, Hemolysin III
CY96_RS26060	COG5002	protein histidine kinase activity
CY96_RS26075	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CY96_RS26080	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CY96_RS26085	COG4853	Protein conserved in bacteria
CY96_RS26095	COG5002	protein histidine kinase activity
CY96_RS26100	COG0745	RESPONSE REGULATOR receiver
CY96_RS26130	COG0305	Participates in initiation and elongation during chromosome replication
CY96_RS26140	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CY96_RS26145	COG4241	membrane
CY96_RS26165	COG0012	GTP binding
CY96_RS26170	COG4481	Protein conserved in bacteria
CY96_RS26175	COG0668	transmembrane transport
CY96_RS26185	COG1475	DNA binding
CY96_RS26190	COG1192	Involved in chromosome partitioning
CY96_RS26215	COG1847	R3H domain protein
CY96_RS26230	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CY96_RS26240	COG0592	DNA-directed DNA polymerase activity
CY96_RS26245	COG2501	S4 domain
CY96_RS26255	COG0187	DNA topoisomerase II activity
CY96_RS26260	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CY96_RS26285	COG0516	GMP reductase activity
CY96_RS26285	COG0517	IMP dehydrogenase activity
CY96_RS26290	COG1686	Belongs to the peptidase S11 family
CY96_RS26320	COG1428	Deoxynucleoside kinase
CY96_RS26325	COG1428	Deoxynucleoside kinase
CY96_RS26330	COG1335	isochorismatase
CY96_RS26340	COG0590	tRNA wobble adenosine to inosine editing
CY96_RS26345	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CY96_RS26390	COG1982	Orn Lys Arg decarboxylase major
CY96_RS26400	COG0470	DNA polymerase III
CY96_RS26405	COG1774	PSP1 C-terminal conserved region
CY96_RS26415	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CY96_RS26425	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CY96_RS26430	COG2002	toxin-antitoxin pair type II binding
CY96_RS26440	COG0084	hydrolase, TatD family'
CY96_RS26460	COG4466	Protein conserved in bacteria
CY96_RS26475	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CY96_RS26480	COG0251	oxidation-reduction process
CY96_RS26510	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CY96_RS26515	COG2002	toxin-antitoxin pair type II binding
CY96_RS26520	COG2244	polysaccharide biosynthetic process
CY96_RS26525	COG3956	TIGRFAM MazG family protein
CY96_RS26530	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CY96_RS26550	COG1098	S1 RNA binding domain
CY96_RS26565	COG2208	phosphoserine phosphatase activity
CY96_RS26575	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CY96_RS26580	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CY96_RS26595	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CY96_RS26600	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CY96_RS26605	COG0512	Glutamine amidotransferase of anthranilate synthase
CY96_RS26610	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CY96_RS26615	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CY96_RS26620	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CY96_RS26625	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CY96_RS26630	COG1396	sequence-specific DNA binding
CY96_RS26635	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CY96_RS26665	COG3880	PFAM UvrB UvrC protein
CY96_RS26675	COG0542	response to heat
CY96_RS26680	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CY96_RS26690	COG4956	integral membrane protein (PIN domain superfamily)
CY96_RS26710	COG1045	serine acetyltransferase
CY96_RS26725	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CY96_RS26730	COG3688	RNA-binding protein containing a PIN domain
CY96_RS26745	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CY96_RS26750	COG0250	Participates in transcription elongation, termination and antitermination
CY96_RS26755	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CY96_RS26775	COG2813	Specifically methylates the guanine in position
CY96_RS26790	COG1358	cellular component organization or biogenesis
CY96_RS26795	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CY96_RS26860	COG0255	Belongs to the universal ribosomal protein uL29 family
CY96_RS26920	COG0201	protein transport
CY96_RS26930	COG0024	Methionine aminopeptidase
CY96_RS26940	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CY96_RS26975	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CY96_RS27000	COG0860	N-Acetylmuramoyl-L-alanine amidase
CY96_RS27005	COG0489	protein tyrosine kinase activity
CY96_RS27015	COG2194	sulfuric ester hydrolase activity
CY96_RS27020	COG0726	polysaccharide deacetylase
CY96_RS27150	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CY96_RS27165	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS27185	COG1404	Belongs to the peptidase S8 family
CY96_RS27195	COG4585	Histidine kinase
CY96_RS27215	COG1309	transcriptional regulator
CY96_RS27245	COG0367	asparagine synthase
CY96_RS27250	COG1309	transcriptional regulator
CY96_RS27315	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS27320	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CY96_RS27325	COG1687	branched-chain amino acid
CY96_RS27350	COG2233	PERMEase
CY96_RS27355	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
CY96_RS27360	COG0288	reversible hydration of carbon dioxide
CY96_RS27365	COG1522	sequence-specific DNA binding
CY96_RS27390	COG0542	response to heat
CY96_RS27395	COG0494	nUDIX hydrolase
CY96_RS27400	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CY96_RS27410	COG0457	Tetratricopeptide repeat
CY96_RS27510	COG2814	Major facilitator Superfamily
CY96_RS27515	COG0546	phosphoglycolate phosphatase activity
CY96_RS27525	COG1082	Xylose isomerase domain protein TIM barrel
CY96_RS27530	COG0673	inositol 2-dehydrogenase activity
CY96_RS27535	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CY96_RS27540	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CY96_RS27550	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CY96_RS27555	COG0662	Cupin 2, conserved barrel domain protein
CY96_RS27560	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CY96_RS27565	COG1349	DNA-binding transcription factor activity
CY96_RS27570	COG0546	phosphoglycolate phosphatase activity
CY96_RS27930	COG2311	Membrane
CY96_RS27940	COG2002	toxin-antitoxin pair type II binding
CY96_RS27970	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CY96_RS28000	COG0584	glycerophosphoryl diester phosphodiesterase
CY96_RS28005	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CY96_RS28045	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CY96_RS28055	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CY96_RS28060	COG0438	transferase activity, transferring glycosyl groups
CY96_RS28065	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CY96_RS28080	COG0438	transferase activity, transferring glycosyl groups
CY96_RS28085	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CY96_RS28090	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CY96_RS28095	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CY96_RS28115	COG2002	toxin-antitoxin pair type II binding
CY96_RS28135	COG2169	Transcriptional regulator
CY96_RS28165	COG0076	glutamate decarboxylase activity
CY96_RS28225	COG3409	Peptidoglycan-binding domain 1 protein
CY96_RS28225	COG5632	N-Acetylmuramoyl-L-alanine amidase
CY96_RS28275	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS28295	COG1136	(ABC) transporter
CY96_RS28300	COG0577	efflux transmembrane transporter activity
CY96_RS28335	COG1522	sequence-specific DNA binding
CY96_RS28345	COG3409	Peptidoglycan-binding domain 1 protein
CY96_RS28345	COG5632	N-Acetylmuramoyl-L-alanine amidase
CY96_RS28350	COG0506	proline dehydrogenase activity
CY96_RS28355	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS28435	COG4641	Protein conserved in bacteria
CY96_RS28455	COG2124	cytochrome p450
CY96_RS28460	COG1846	Transcriptional regulator
CY96_RS28465	COG1846	Transcriptional regulator
CY96_RS28470	COG2814	Major facilitator Superfamily
CY96_RS28490	COG4499	WXG100 protein secretion system (Wss), protein YukC
CY96_RS28490	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CY96_RS28495	COG1923	regulation of RNA biosynthetic process
CY96_RS28520	COG1522	sequence-specific DNA binding
CY96_RS28530	COG2184	nucleotidyltransferase activity
CY96_RS28570	COG1533	DNA photolyase activity
CY96_RS28585	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CY96_RS28620	COG1802	Transcriptional regulator
CY96_RS28635	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CY96_RS28650	COG2323	membrane
CY96_RS28695	COG1378	Sugar-specific transcriptional regulator TrmB
CY96_RS28725	COG0506	proline dehydrogenase activity
CY96_RS28730	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CY96_RS28745	COG3048	D-serine ammonia-lyase activity
CY96_RS28750	COG1131	(ABC) transporter
CY96_RS28760	COG4974	Belongs to the 'phage' integrase family
CY96_RS28780	COG2259	Doxx family
CY96_RS28785	COG0318	PFAM AMP-dependent synthetase and ligase
CY96_RS28810	COG2814	Major facilitator Superfamily
CY96_RS28840	COG0823	Involved in the tonB-independent uptake of proteins
CY96_RS28845	COG3397	chitin binding
CY96_RS28855	COG0697	spore germination
CY96_RS28910	COG0457	Tetratricopeptide repeat
CY96_RS28965	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CY96_RS28995	COG5632	N-Acetylmuramoyl-L-alanine amidase
CY96_RS28995	COG3409	Peptidoglycan-binding domain 1 protein
CY96_RS29030	COG1132	(ABC) transporter
CY96_RS29050	COG1475	DNA binding
CY96_RS29100	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CY96_RS29105	COG0300	oxidoreductase activity
CY96_RS29105	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS29105	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CY96_RS29105	COG0318	PFAM AMP-dependent synthetase and ligase
CY96_RS29105	COG3321	synthase
CY96_RS29120	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CY96_RS29125	COG1250	3-hydroxyacyl-CoA dehydrogenase
CY96_RS29140	COG1960	acyl-CoA dehydrogenase activity
CY96_RS29160	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS29160	COG0318	PFAM AMP-dependent synthetase and ligase
CY96_RS29160	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CY96_RS29160	COG1028	Short-chain dehydrogenase reductase Sdr
CY96_RS29160	COG3321	synthase
CY96_RS29160	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CY96_RS29160	COG0318	PFAM AMP-dependent synthetase and ligase
CY96_RS29160	COG0300	oxidoreductase activity
CY96_RS29160	COG3321	synthase
CY96_RS29160	COG0300	oxidoreductase activity
CY96_RS29165	COG3279	Response regulator of the LytR AlgR family
CY96_RS29210	COG0667	Aldo Keto reductase
CY96_RS29330	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CY96_RS29425	COG2376	Dihydroxyacetone kinase
CY96_RS30030	COG0582	viral genome integration into host DNA
CY96_RS30485	COG1285	pathogenesis
CY96_RS30645	COG2076	Multidrug Resistance protein
CY96_RS30970	COG2002	toxin-antitoxin pair type II binding
CY96_RS31215	COG3409	Peptidoglycan-binding domain 1 protein
CY96_RS31215	COG5632	N-Acetylmuramoyl-L-alanine amidase
CY96_RS31600	COG0577	efflux transmembrane transporter activity