locus-tag class description AS54_RS00055 PF00873 AcrB/AcrD/AcrF family AS54_RS00070 PF01625 Peptide methionine sulfoxide reductase AS54_RS00200 PF00709 Adenylosuccinate synthetase AS54_RS00205 PF00709 Adenylosuccinate synthetase AS54_RS00260 PF10396 GTP-binding protein TrmE N-terminus AS54_RS00260 PF12631 MnmE helical domain AS54_RS00260 PF01926 50S ribosome-binding GTPase AS54_RS00480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS54_RS00525 PF00483 Nucleotidyl transferase AS54_RS00525 PF00132 Bacterial transferase hexapeptide (six repeats) AS54_RS00640 PF01430 Hsp33 protein AS54_RS00825 PF03458 UPF0126 domain AS54_RS00830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS00840 PF03061 Thioesterase superfamily AS54_RS00850 PF00535 Glycosyl transferase family 2 AS54_RS00855 PF12848 ABC transporter AS54_RS00855 PF00005 ABC transporter AS54_RS00875 PF00535 Glycosyl transferase family 2 AS54_RS00880 PF00440 Bacterial regulatory proteins, tetR family AS54_RS00885 PF00873 AcrB/AcrD/AcrF family AS54_RS00890 PF01641 SelR domain AS54_RS00890 PF01625 Peptide methionine sulfoxide reductase AS54_RS00895 PF01594 AI-2E family transporter AS54_RS00900 PF04172 LrgB-like family AS54_RS00905 PF03788 LrgA family AS54_RS00910 PF04397 LytTr DNA-binding domain AS54_RS00910 PF00072 Response regulator receiver domain AS54_RS00915 PF13492 GAF domain AS54_RS00915 PF07694 5TMR of 5TMR-LYT AS54_RS00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS00915 PF06580 Histidine kinase AS54_RS00920 PF07690 Major Facilitator Superfamily AS54_RS00925 PF02028 BCCT, betaine/carnitine/choline family transporter AS54_RS00930 PF02898 Nitric oxide synthase, oxygenase domain AS54_RS00935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS54_RS00935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS54_RS00945 PF02293 AmiS/UreI family transporter AS54_RS00955 PF16363 GDP-mannose 4,6 dehydratase AS54_RS00960 PF03006 Haemolysin-III related AS54_RS00970 PF00271 Helicase conserved C-terminal domain AS54_RS00970 PF03880 DbpA RNA binding domain AS54_RS00970 PF00270 DEAD/DEAH box helicase AS54_RS00980 PF00478 IMP dehydrogenase / GMP reductase domain AS54_RS00985 PF08439 Oligopeptidase F AS54_RS00985 PF01432 Peptidase family M3 AS54_RS00995 PF02590 Predicted SPOUT methyltransferase AS54_RS01005 PF13180 PDZ domain AS54_RS01010 PF00753 Metallo-beta-lactamase superfamily AS54_RS01015 PF09648 YycH protein AS54_RS01020 PF07435 YycH protein AS54_RS01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS01025 PF00672 HAMP domain AS54_RS01025 PF13426 PAS domain AS54_RS01025 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS01030 PF00486 Transcriptional regulatory protein, C terminal AS54_RS01030 PF00072 Response regulator receiver domain AS54_RS01055 PF00709 Adenylosuccinate synthetase AS54_RS01060 PF03796 DnaB-like helicase C terminal domain AS54_RS01060 PF00772 DnaB-like helicase N terminal domain AS54_RS01065 PF03948 Ribosomal protein L9, C-terminal domain AS54_RS01065 PF01281 Ribosomal protein L9, N-terminal domain AS54_RS01070 PF02272 DHHA1 domain AS54_RS01070 PF01368 DHH family AS54_RS01075 PF09991 Predicted membrane protein (DUF2232) AS54_RS01080 PF01084 Ribosomal protein S18 AS54_RS01085 PF00436 Single-strand binding protein family AS54_RS01090 PF01250 Ribosomal protein S6 AS54_RS01095 PF01926 50S ribosome-binding GTPase AS54_RS01095 PF06071 Protein of unknown function (DUF933) AS54_RS01100 PF06107 Bacterial protein of unknown function (DUF951) AS54_RS01105 PF00924 Mechanosensitive ion channel AS54_RS01110 PF06866 Protein of unknown function (DUF1256) AS54_RS01115 PF02195 ParB-like nuclease domain AS54_RS01115 PF17762 HTH domain found in ParB protein AS54_RS01120 PF13614 AAA domain AS54_RS01125 PF02195 ParB-like nuclease domain AS54_RS01125 PF17762 HTH domain found in ParB protein AS54_RS01130 PF02527 rRNA small subunit methyltransferase G AS54_RS01135 PF01134 Glucose inhibited division protein A AS54_RS01135 PF13932 GidA associated domain AS54_RS01140 PF10396 GTP-binding protein TrmE N-terminus AS54_RS01140 PF12631 MnmE helical domain AS54_RS01140 PF01926 50S ribosome-binding GTPase AS54_RS01145 PF01424 R3H domain AS54_RS01145 PF14804 Jag N-terminus AS54_RS01150 PF02096 60Kd inner membrane protein AS54_RS01155 PF00825 Ribonuclease P AS54_RS01160 PF00468 Ribosomal protein L34 AS54_RS01165 PF00308 Bacterial dnaA protein AS54_RS01165 PF08299 Bacterial dnaA protein helix-turn-helix AS54_RS01165 PF11638 DnaA N-terminal domain AS54_RS01170 PF00712 DNA polymerase III beta subunit, N-terminal domain AS54_RS01170 PF02767 DNA polymerase III beta subunit, central domain AS54_RS01170 PF02768 DNA polymerase III beta subunit, C-terminal domain AS54_RS01180 PF02463 RecF/RecN/SMC N terminal domain AS54_RS01185 PF01751 Toprim domain AS54_RS01185 PF00986 DNA gyrase B subunit, carboxyl terminus AS54_RS01185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS01185 PF00204 DNA gyrase B AS54_RS01190 PF00521 DNA gyrase/topoisomerase IV, subunit A AS54_RS01190 PF03989 DNA gyrase C-terminal domain, beta-propeller AS54_RS01220 PF14175 YaaC-like Protein AS54_RS01225 PF00478 IMP dehydrogenase / GMP reductase domain AS54_RS01225 PF00571 CBS domain AS54_RS01230 PF00768 D-alanyl-D-alanine carboxypeptidase AS54_RS01230 PF07943 Penicillin-binding protein 5, C-terminal domain AS54_RS01235 PF01680 SOR/SNZ family AS54_RS01240 PF01174 SNO glutamine amidotransferase family AS54_RS01245 PF02403 Seryl-tRNA synthetase N-terminal domain AS54_RS01245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS54_RS01260 PF01712 Deoxynucleoside kinase AS54_RS01265 PF01712 Deoxynucleoside kinase AS54_RS01270 PF00857 Isochorismatase family AS54_RS01280 PF14437 MafB19-like deaminase AS54_RS01285 PF12169 DNA polymerase III subunits gamma and tau domain III AS54_RS01290 PF02575 YbaB/EbfC DNA-binding family AS54_RS01295 PF02132 RecR protein AS54_RS01295 PF13662 Toprim domain AS54_RS01300 PF10704 Protein of unknown function (DUF2508) AS54_RS01305 PF07441 SigmaK-factor processing regulatory protein BofA AS54_RS01340 PF01276 Orn/Lys/Arg decarboxylase, major domain AS54_RS01340 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AS54_RS01345 PF02223 Thymidylate kinase AS54_RS01350 PF09115 DNA polymerase III, delta subunit, C terminal AS54_RS01355 PF04468 PSP1 C-terminal conserved region AS54_RS01360 PF06156 Initiation control protein YabA AS54_RS01365 PF05175 Methyltransferase small domain AS54_RS01370 PF01541 GIY-YIG catalytic domain AS54_RS01375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS54_RS01380 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AS54_RS01380 PF18277 AbrB C-terminal domain AS54_RS01385 PF01588 Putative tRNA binding domain AS54_RS01385 PF08264 Anticodon-binding domain of tRNA AS54_RS01385 PF09334 tRNA synthetases class I (M) AS54_RS01390 PF01026 TatD related DNase AS54_RS01395 PF13331 Domain of unknown function (DUF4093) AS54_RS01395 PF13662 Toprim domain AS54_RS01400 PF00398 Ribosomal RNA adenine dimethylase AS54_RS01405 PF05582 YabG peptidase U57 AS54_RS01410 PF06257 Biofilm formation stimulator VEG AS54_RS01415 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS54_RS01420 PF00288 GHMP kinases N terminal domain AS54_RS01420 PF08544 GHMP kinases C terminal AS54_RS01425 PF00156 Phosphoribosyl transferase domain AS54_RS01425 PF09182 Bacterial purine repressor, N-terminal AS54_RS01430 PF01042 Endoribonuclease L-PSP AS54_RS01435 PF04026 SpoVG AS54_RS01440 PF00132 Bacterial transferase hexapeptide (six repeats) AS54_RS01440 PF00483 Nucleotidyl transferase AS54_RS01445 PF14572 Phosphoribosyl synthetase-associated domain AS54_RS01445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AS54_RS01450 PF01195 Peptidyl-tRNA hydrolase AS54_RS01460 PF00271 Helicase conserved C-terminal domain AS54_RS01460 PF00270 DEAD/DEAH box helicase AS54_RS01460 PF02559 CarD-like/TRCF domain AS54_RS01460 PF03461 TRCF domain AS54_RS01460 PF17757 UvrB interaction domain AS54_RS01465 PF15714 Stage V sporulation protein T C-terminal, transcription factor AS54_RS01465 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AS54_RS01470 PF14667 Polysaccharide biosynthesis C-terminal domain AS54_RS01470 PF01943 Polysaccharide biosynthesis protein AS54_RS01475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS54_RS01475 PF03819 MazG nucleotide pyrophosphohydrolase domain AS54_RS01480 PF01479 S4 domain AS54_RS01485 PF07873 YabP family AS54_RS01490 PF09578 Spore cortex protein YabQ (Spore_YabQ) AS54_RS01500 PF00575 S1 RNA binding domain AS54_RS01515 PF07228 Stage II sporulation protein E (SpoIIE) AS54_RS01520 PF11734 TilS substrate C-terminal domain AS54_RS01520 PF09179 TilS substrate binding domain AS54_RS01520 PF01171 PP-loop family AS54_RS01525 PF00156 Phosphoribosyl transferase domain AS54_RS01530 PF17862 AAA+ lid domain AS54_RS01530 PF00004 ATPase family associated with various cellular activities (AAA) AS54_RS01530 PF01434 Peptidase family M41 AS54_RS01530 PF06480 FtsH Extracellular AS54_RS01535 PF03309 Type III pantothenate kinase AS54_RS01540 PF01430 Hsp33 protein AS54_RS01545 PF00291 Pyridoxal-phosphate dependent enzyme AS54_RS01550 PF00425 chorismate binding enzyme AS54_RS01550 PF04715 Anthranilate synthase component I, N terminal region AS54_RS01555 PF00117 Glutamine amidotransferase class-I AS54_RS01560 PF01063 Amino-transferase class IV AS54_RS01565 PF00809 Pterin binding enzyme AS54_RS01570 PF02152 Dihydroneopterin aldolase AS54_RS01575 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AS54_RS01580 PF01381 Helix-turn-helix AS54_RS01585 PF01207 Dihydrouridine synthase (Dus) AS54_RS01590 PF01336 OB-fold nucleic acid binding domain AS54_RS01590 PF00152 tRNA synthetases class II (D, K and N) AS54_RS01670 PF17727 CtsR C-terminal dimerization domain AS54_RS01670 PF05848 CtsR N-terminal HTH domain AS54_RS01675 PF02151 UvrB/uvrC motif AS54_RS01680 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AS54_RS01685 PF00004 ATPase family associated with various cellular activities (AAA) AS54_RS01685 PF07724 AAA domain (Cdc48 subfamily) AS54_RS01685 PF17871 AAA lid domain AS54_RS01685 PF10431 C-terminal, D2-small domain, of ClpB protein AS54_RS01685 PF02861 Clp amino terminal domain, pathogenicity island component AS54_RS01690 PF18073 Rubredoxin metal binding domain AS54_RS01695 PF10635 DisA bacterial checkpoint controller linker region AS54_RS01695 PF02457 DisA bacterial checkpoint controller nucleotide-binding AS54_RS01705 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AS54_RS01710 PF02542 YgbB family AS54_RS01715 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS54_RS01720 PF06426 Serine acetyltransferase, N-terminal AS54_RS01720 PF00132 Bacterial transferase hexapeptide (six repeats) AS54_RS01725 PF09190 DALR domain AS54_RS01725 PF01406 tRNA synthetases class I (C) catalytic domain AS54_RS01730 PF00636 Ribonuclease III domain AS54_RS01735 PF00588 SpoU rRNA Methylase family AS54_RS01735 PF08032 RNA 2'-O ribose methyltransferase substrate binding AS54_RS01740 PF05991 YacP-like NYN domain AS54_RS01745 PF08281 Sigma-70, region 4 AS54_RS01745 PF04542 Sigma-70 region 2 AS54_RS01750 PF00471 Ribosomal protein L33 AS54_RS01755 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AS54_RS01760 PF02357 Transcription termination factor nusG AS54_RS01760 PF00467 KOW motif AS54_RS01765 PF00298 Ribosomal protein L11, RNA binding domain AS54_RS01765 PF03946 Ribosomal protein L11, N-terminal domain AS54_RS01770 PF00687 Ribosomal protein L1p/L10e family AS54_RS01775 PF00466 Ribosomal protein L10 AS54_RS01780 PF16320 Ribosomal protein L7/L12 dimerisation domain AS54_RS01780 PF00542 Ribosomal protein L7/L12 C-terminal domain AS54_RS01785 PF05175 Methyltransferase small domain AS54_RS01790 PF04563 RNA polymerase beta subunit AS54_RS01790 PF04560 RNA polymerase Rpb2, domain 7 AS54_RS01790 PF10385 RNA polymerase beta subunit external 1 domain AS54_RS01790 PF04565 RNA polymerase Rpb2, domain 3 AS54_RS01790 PF04561 RNA polymerase Rpb2, domain 2 AS54_RS01790 PF00562 RNA polymerase Rpb2, domain 6 AS54_RS01795 PF04997 RNA polymerase Rpb1, domain 1 AS54_RS01795 PF05000 RNA polymerase Rpb1, domain 4 AS54_RS01795 PF04998 RNA polymerase Rpb1, domain 5 AS54_RS01795 PF00623 RNA polymerase Rpb1, domain 2 AS54_RS01795 PF04983 RNA polymerase Rpb1, domain 3 AS54_RS01800 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AS54_RS01805 PF00164 Ribosomal protein S12/S23 AS54_RS01810 PF00177 Ribosomal protein S7p/S5e AS54_RS01815 PF03764 Elongation factor G, domain IV AS54_RS01815 PF14492 Elongation Factor G, domain II AS54_RS01815 PF00679 Elongation factor G C-terminus AS54_RS01815 PF03144 Elongation factor Tu domain 2 AS54_RS01815 PF00009 Elongation factor Tu GTP binding domain AS54_RS01820 PF03143 Elongation factor Tu C-terminal domain AS54_RS01820 PF03144 Elongation factor Tu domain 2 AS54_RS01820 PF00009 Elongation factor Tu GTP binding domain AS54_RS01825 PF00338 Ribosomal protein S10p/S20e AS54_RS01830 PF00297 Ribosomal protein L3 AS54_RS01835 PF00573 Ribosomal protein L4/L1 family AS54_RS01840 PF00276 Ribosomal protein L23 AS54_RS01845 PF03947 Ribosomal Proteins L2, C-terminal domain AS54_RS01845 PF00181 Ribosomal Proteins L2, RNA binding domain AS54_RS01850 PF00203 Ribosomal protein S19 AS54_RS01855 PF00237 Ribosomal protein L22p/L17e AS54_RS01860 PF00189 Ribosomal protein S3, C-terminal domain AS54_RS01860 PF07650 KH domain AS54_RS01865 PF00252 Ribosomal protein L16p/L10e AS54_RS01870 PF00831 Ribosomal L29 protein AS54_RS01875 PF00366 Ribosomal protein S17 AS54_RS01880 PF00238 Ribosomal protein L14p/L23e AS54_RS01885 PF00467 KOW motif AS54_RS01885 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AS54_RS01890 PF00673 ribosomal L5P family C-terminus AS54_RS01890 PF00281 Ribosomal protein L5 AS54_RS01895 PF00253 Ribosomal protein S14p/S29e AS54_RS01900 PF00410 Ribosomal protein S8 AS54_RS01905 PF00347 Ribosomal protein L6 AS54_RS01910 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AS54_RS01915 PF03719 Ribosomal protein S5, C-terminal domain AS54_RS01915 PF00333 Ribosomal protein S5, N-terminal domain AS54_RS01920 PF00327 Ribosomal protein L30p/L7e AS54_RS01925 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AS54_RS01930 PF00344 SecY translocase AS54_RS01935 PF05191 Adenylate kinase, active site lid AS54_RS01940 PF00557 Metallopeptidase family M24 AS54_RS01945 PF01176 Translation initiation factor 1A / IF-1 AS54_RS01950 PF00444 Ribosomal protein L36 AS54_RS01955 PF00416 Ribosomal protein S13/S18 AS54_RS01960 PF00411 Ribosomal protein S11 AS54_RS01965 PF01000 RNA polymerase Rpb3/RpoA insert domain AS54_RS01965 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AS54_RS01965 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AS54_RS01970 PF01196 Ribosomal protein L17 AS54_RS01975 PF00005 ABC transporter AS54_RS01980 PF00005 ABC transporter AS54_RS01985 PF02361 Cobalt transport protein AS54_RS01990 PF01416 tRNA pseudouridine synthase AS54_RS01995 PF00572 Ribosomal protein L13 AS54_RS02000 PF00380 Ribosomal protein S9/S16 AS54_RS02010 PF01520 N-acetylmuramoyl-L-alanine amidase AS54_RS02015 PF10609 NUBPL iron-transfer P-loop NTPase AS54_RS02020 PF17898 Spore germination GerD central core domain AS54_RS02025 PF14089 KinB-signalling pathway activation in sporulation AS54_RS02030 PF01522 Polysaccharide deacetylase AS54_RS02100 PF02595 Glycerate kinase family AS54_RS02105 PF00491 Arginase family AS54_RS02110 PF02457 DisA bacterial checkpoint controller nucleotide-binding AS54_RS02115 PF07949 YbbR-like protein AS54_RS02120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS54_RS02120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS54_RS02120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS54_RS02120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS54_RS02130 PF01380 SIS domain AS54_RS02145 PF00392 Bacterial regulatory proteins, gntR family AS54_RS02145 PF07729 FCD domain AS54_RS02150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS54_RS02150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS54_RS02155 PF02447 GntP family permease AS54_RS02160 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AS54_RS02160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS54_RS02165 PF00326 Prolyl oligopeptidase family AS54_RS02165 PF07676 WD40-like Beta Propeller Repeat AS54_RS02200 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS02205 PF09383 NIL domain AS54_RS02205 PF00005 ABC transporter AS54_RS02210 PF03180 NLPA lipoprotein AS54_RS02215 PF00107 Zinc-binding dehydrogenase AS54_RS02215 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS02225 PF01565 FAD binding domain AS54_RS02230 PF07690 Major Facilitator Superfamily AS54_RS02240 PF07690 Major Facilitator Superfamily AS54_RS02255 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS02260 PF12911 N-terminal TM domain of oligopeptide transport permease C AS54_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS02265 PF00005 ABC transporter AS54_RS02265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS54_RS02270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS54_RS02270 PF00005 ABC transporter AS54_RS02275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS02285 PF12833 Helix-turn-helix domain AS54_RS02295 PF00440 Bacterial regulatory proteins, tetR family AS54_RS02305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS02310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS02315 PF00248 Aldo/keto reductase family AS54_RS02320 PF03807 NADP oxidoreductase coenzyme F420-dependent AS54_RS02320 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS54_RS02330 PF04973 Nicotinamide mononucleotide transporter AS54_RS02335 PF06800 Sugar transport protein AS54_RS02340 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS02350 PF12727 PBP superfamily domain AS54_RS02350 PF12728 Helix-turn-helix domain AS54_RS02365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS02365 PF03466 LysR substrate binding domain AS54_RS02370 PF00892 EamA-like transporter family AS54_RS02375 PF14142 YrzO-like protein AS54_RS02385 PF01553 Acyltransferase AS54_RS02395 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS54_RS02395 PF00356 Bacterial regulatory proteins, lacI family AS54_RS02405 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS02405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS54_RS02420 PF01026 TatD related DNase AS54_RS02430 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) AS54_RS02455 PF16326 ABC transporter C-terminal domain AS54_RS02455 PF00005 ABC transporter AS54_RS02455 PF12848 ABC transporter AS54_RS02465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS02470 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS02475 PF12911 N-terminal TM domain of oligopeptide transport permease C AS54_RS02475 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS02480 PF00005 ABC transporter AS54_RS02480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS54_RS02485 PF00005 ABC transporter AS54_RS02485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS54_RS02525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS02530 PF01557 Fumarylacetoacetate (FAA) hydrolase family AS54_RS02540 PF07690 Major Facilitator Superfamily AS54_RS02545 PF01820 D-ala D-ala ligase N-terminus AS54_RS02545 PF07478 D-ala D-ala ligase C-terminus AS54_RS02550 PF02875 Mur ligase family, glutamate ligase domain AS54_RS02550 PF08245 Mur ligase middle domain AS54_RS02550 PF01225 Mur ligase family, catalytic domain AS54_RS02555 PF00271 Helicase conserved C-terminal domain AS54_RS02555 PF00270 DEAD/DEAH box helicase AS54_RS02560 PF03851 UV-endonuclease UvdE AS54_RS02565 PF01694 Rhomboid family AS54_RS02570 PF01648 4'-phosphopantetheinyl transferase superfamily AS54_RS02580 PF01168 Alanine racemase, N-terminal domain AS54_RS02580 PF00842 Alanine racemase, C-terminal domain AS54_RS02585 PF01402 Ribbon-helix-helix protein, copG family AS54_RS02590 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AS54_RS02595 PF00575 S1 RNA binding domain AS54_RS02595 PF09371 Tex-like protein N-terminal domain AS54_RS02595 PF16921 Tex protein YqgF-like domain AS54_RS02595 PF17674 HHH domain AS54_RS02605 PF17283 SprT-like zinc ribbon domain AS54_RS02605 PF10263 SprT-like family AS54_RS02690 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AS54_RS02695 PF00814 Glycoprotease family AS54_RS02700 PF00583 Acetyltransferase (GNAT) family AS54_RS02705 PF00814 Glycoprotease family AS54_RS02710 PF00005 ABC transporter AS54_RS02710 PF16326 ABC transporter C-terminal domain AS54_RS02710 PF12848 ABC transporter AS54_RS02715 PF06971 Putative DNA-binding protein N-terminus AS54_RS02715 PF02629 CoA binding domain AS54_RS02725 PF02517 CPBP intramembrane metalloprotease AS54_RS02730 PF00166 Chaperonin 10 Kd subunit AS54_RS02735 PF00118 TCP-1/cpn60 chaperonin family AS54_RS02745 PF04740 LXG domain of WXG superfamily AS54_RS02745 PF14449 Pre-toxin TG AS54_RS02755 PF02540 NAD synthase AS54_RS02755 PF00117 Glutamine amidotransferase class-I AS54_RS02755 PF00958 GMP synthase C terminal domain AS54_RS02760 PF00860 Permease family AS54_RS02765 PF00072 Response regulator receiver domain AS54_RS02765 PF00486 Transcriptional regulatory protein, C terminal AS54_RS02770 PF00989 PAS fold AS54_RS02770 PF16736 Single Cache-like AS54_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS02770 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS02795 PF01323 DSBA-like thioredoxin domain AS54_RS02845 PF02673 Bacitracin resistance protein BacA AS54_RS02855 PF00005 ABC transporter AS54_RS02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS02860 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS02865 PF00072 Response regulator receiver domain AS54_RS02865 PF00486 Transcriptional regulatory protein, C terminal AS54_RS02885 PF00892 EamA-like transporter family AS54_RS02910 PF00731 AIR carboxylase AS54_RS02915 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AS54_RS02915 PF02222 ATP-grasp domain AS54_RS02920 PF00206 Lyase AS54_RS02920 PF10397 Adenylosuccinate lyase C-terminus AS54_RS02925 PF01259 SAICAR synthetase AS54_RS02930 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AS54_RS02940 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AS54_RS02940 PF00586 AIR synthase related protein, N-terminal domain AS54_RS02940 PF02769 AIR synthase related protein, C-terminal domain AS54_RS02945 PF00156 Phosphoribosyl transferase domain AS54_RS02950 PF00586 AIR synthase related protein, N-terminal domain AS54_RS02950 PF02769 AIR synthase related protein, C-terminal domain AS54_RS02955 PF00551 Formyl transferase AS54_RS02960 PF02142 MGS-like domain AS54_RS02960 PF01808 AICARFT/IMPCHase bienzyme AS54_RS02965 PF02844 Phosphoribosylglycinamide synthetase, N domain AS54_RS02965 PF02843 Phosphoribosylglycinamide synthetase, C domain AS54_RS02965 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AS54_RS02990 PF01884 PcrB family AS54_RS02995 PF00580 UvrD/REP helicase N-terminal domain AS54_RS02995 PF13361 UvrD-like helicase C-terminal domain AS54_RS03000 PF12826 Helix-hairpin-helix motif AS54_RS03000 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AS54_RS03000 PF03120 NAD-dependent DNA ligase OB-fold domain AS54_RS03000 PF01653 NAD-dependent DNA ligase adenylation domain AS54_RS03000 PF00533 BRCA1 C Terminus (BRCT) domain AS54_RS03005 PF07537 CamS sex pheromone cAM373 precursor AS54_RS03010 PF01925 Sulfite exporter TauE/SafE AS54_RS03015 PF00171 Aldehyde dehydrogenase family AS54_RS03025 PF00857 Isochorismatase family AS54_RS03030 PF00005 ABC transporter AS54_RS03030 PF09383 NIL domain AS54_RS03035 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS03040 PF03180 NLPA lipoprotein AS54_RS03055 PF17886 HSP20-like domain found in ArsA AS54_RS03055 PF02374 Anion-transporting ATPase AS54_RS03060 PF01047 MarR family AS54_RS03065 PF05360 yiaA/B two helix domain AS54_RS03070 PF02686 Glu-tRNAGln amidotransferase C subunit AS54_RS03075 PF01425 Amidase AS54_RS03080 PF02934 GatB/GatE catalytic domain AS54_RS03080 PF02637 GatB domain AS54_RS03085 PF00781 Diacylglycerol kinase catalytic domain AS54_RS03090 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS03095 PF00202 Aminotransferase class-III AS54_RS03100 PF00158 Sigma-54 interaction domain AS54_RS03105 PF00171 Aldehyde dehydrogenase family AS54_RS03110 PF00893 Small Multidrug Resistance protein AS54_RS03115 PF02073 Thermophilic metalloprotease (M29) AS54_RS03130 PF01773 Na+ dependent nucleoside transporter N-terminus AS54_RS03130 PF07662 Na+ dependent nucleoside transporter C-terminus AS54_RS03130 PF07670 Nucleoside recognition AS54_RS03135 PF02475 Met-10+ like-protein AS54_RS03135 PF01938 TRAM domain AS54_RS03135 PF05958 tRNA (Uracil-5-)-methyltransferase AS54_RS03140 PF01207 Dihydrouridine synthase (Dus) AS54_RS03145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS03145 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS03145 PF00989 PAS fold AS54_RS03145 PF13188 PAS domain AS54_RS03145 PF13426 PAS domain AS54_RS03150 PF07308 Protein of unknown function (DUF1456) AS54_RS03165 PF13378 Enolase C-terminal domain-like AS54_RS03165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AS54_RS03175 PF03553 Na+/H+ antiporter family AS54_RS03180 PF07687 Peptidase dimerisation domain AS54_RS03180 PF01546 Peptidase family M20/M25/M40 AS54_RS03190 PF13192 Thioredoxin domain AS54_RS03190 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS03195 PF00578 AhpC/TSA family AS54_RS03200 PF01636 Phosphotransferase enzyme family AS54_RS03205 PF01008 Initiation factor 2 subunit family AS54_RS03210 PF00596 Class II Aldolase and Adducin N-terminal domain AS54_RS03215 PF01032 FecCD transport family AS54_RS03220 PF01032 FecCD transport family AS54_RS03225 PF01497 Periplasmic binding protein AS54_RS03230 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS03245 PF12728 Helix-turn-helix domain AS54_RS03295 PF10127 RNA repair pathway DNA polymerase beta family AS54_RS03300 PF07690 Major Facilitator Superfamily AS54_RS03305 PF01266 FAD dependent oxidoreductase AS54_RS03305 PF00355 Rieske [2Fe-2S] domain AS54_RS03315 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS03320 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS54_RS03325 PF00005 ABC transporter AS54_RS03330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS03330 PF00672 HAMP domain AS54_RS03330 PF02743 Cache domain AS54_RS03335 PF16657 Maltogenic Amylase, C-terminal domain AS54_RS03335 PF00128 Alpha amylase, catalytic domain AS54_RS03340 PF02378 Phosphotransferase system, EIIC AS54_RS03340 PF00367 phosphotransferase system, EIIB AS54_RS03340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS54_RS03345 PF03372 Endonuclease/Exonuclease/phosphatase family AS54_RS03350 PF01061 ABC-2 type transporter AS54_RS03355 PF01751 Toprim domain AS54_RS03355 PF01131 DNA topoisomerase AS54_RS03360 PF02110 Hydroxyethylthiazole kinase family AS54_RS03365 PF02581 Thiamine monophosphate synthase AS54_RS03370 PF03605 Anaerobic c4-dicarboxylate membrane transporter AS54_RS03375 PF00672 HAMP domain AS54_RS03375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS03380 PF01910 Thiamine-binding protein AS54_RS03385 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS03395 PF00005 ABC transporter AS54_RS03405 PF00005 ABC transporter AS54_RS03405 PF12848 ABC transporter AS54_RS03410 PF00041 Fibronectin type III domain AS54_RS03410 PF00704 Glycosyl hydrolases family 18 AS54_RS03435 PF08360 QacR-like protein, C-terminal region AS54_RS03435 PF00440 Bacterial regulatory proteins, tetR family AS54_RS03455 PF11700 Vacuole effluxer Atg22 like AS54_RS03470 PF03129 Anticodon binding domain AS54_RS03470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS54_RS03470 PF09180 Prolyl-tRNA synthetase, C-terminal AS54_RS03480 PF00480 ROK family AS54_RS03485 PF02342 TerD domain AS54_RS03490 PF02342 TerD domain AS54_RS03495 PF02342 TerD domain AS54_RS03500 PF03741 Integral membrane protein TerC family AS54_RS03505 PF14266 Putative component of 'biosynthetic module' AS54_RS03510 PF05816 Toxic anion resistance protein (TelA) AS54_RS03515 PF00690 Cation transporter/ATPase, N-terminus AS54_RS03515 PF00689 Cation transporting ATPase, C-terminus AS54_RS03520 PF06569 Protein of unknown function (DUF1128) AS54_RS03525 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS54_RS03535 PF03631 Virulence factor BrkB AS54_RS03545 PF00892 EamA-like transporter family AS54_RS03555 PF10502 Signal peptidase, peptidase S26 AS54_RS03565 PF09335 SNARE associated Golgi protein AS54_RS03580 PF16242 Pyridoxamine 5'-phosphate oxidase like AS54_RS03585 PF01699 Sodium/calcium exchanger protein AS54_RS03590 PF14167 YfkD-like protein AS54_RS03595 PF08756 YfkB-like domain AS54_RS03595 PF04055 Radical SAM superfamily AS54_RS03605 PF05683 Fumarase C-terminus AS54_RS03605 PF05681 Fumarate hydratase (Fumerase) AS54_RS03610 PF01522 Polysaccharide deacetylase AS54_RS03615 PF00730 HhH-GPD superfamily base excision DNA repair protein AS54_RS03620 PF01938 TRAM domain AS54_RS03620 PF05958 tRNA (Uracil-5-)-methyltransferase AS54_RS03625 PF01416 tRNA pseudouridine synthase AS54_RS03635 PF02954 Bacterial regulatory protein, Fis family AS54_RS03635 PF00158 Sigma-54 interaction domain AS54_RS03635 PF13426 PAS domain AS54_RS03645 PF00324 Amino acid permease AS54_RS03650 PF01546 Peptidase family M20/M25/M40 AS54_RS03650 PF07687 Peptidase dimerisation domain AS54_RS03680 PF04960 Glutaminase AS54_RS03685 PF02378 Phosphotransferase system, EIIC AS54_RS03685 PF00367 phosphotransferase system, EIIB AS54_RS03690 PF00144 Beta-lactamase AS54_RS03705 PF00535 Glycosyl transferase family 2 AS54_RS03710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS54_RS03710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS54_RS03710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS54_RS03715 PF01370 NAD dependent epimerase/dehydratase family AS54_RS03715 PF00551 Formyl transferase AS54_RS03715 PF02911 Formyl transferase, C-terminal domain AS54_RS03720 PF00535 Glycosyl transferase family 2 AS54_RS03730 PF02901 Pyruvate formate lyase-like AS54_RS03730 PF01228 Glycine radical AS54_RS03735 PF04055 Radical SAM superfamily AS54_RS03740 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AS54_RS03740 PF04101 Glycosyltransferase family 28 C-terminal domain AS54_RS03755 PF01979 Amidohydrolase family AS54_RS03760 PF01370 NAD dependent epimerase/dehydratase family AS54_RS03760 PF08338 Domain of unknown function (DUF1731) AS54_RS03765 PF02631 RecX family AS54_RS03780 PF08176 Small acid-soluble spore protein K family AS54_RS03785 PF14043 WVELL protein AS54_RS03790 PF04307 LexA-binding, inner membrane-associated putative hydrolase AS54_RS03795 PF00730 HhH-GPD superfamily base excision DNA repair protein AS54_RS03795 PF14815 NUDIX domain AS54_RS03805 PF04259 Small, acid-soluble spore protein, gamma-type AS54_RS03810 PF14182 YgaB-like protein AS54_RS03815 PF04167 Protein of unknown function (DUF402) AS54_RS03820 PF00664 ABC transporter transmembrane region AS54_RS03820 PF00005 ABC transporter AS54_RS03825 PF06081 Aromatic acid exporter family member 1 AS54_RS03830 PF00310 Glutamine amidotransferases class-II AS54_RS03830 PF01493 GXGXG motif AS54_RS03830 PF01645 Conserved region in glutamate synthase AS54_RS03830 PF04898 Glutamate synthase central domain AS54_RS03835 PF00202 Aminotransferase class-III AS54_RS03840 PF00005 ABC transporter AS54_RS03855 PF07885 Ion channel AS54_RS03860 PF00578 AhpC/TSA family AS54_RS03865 PF01475 Ferric uptake regulator family AS54_RS03870 PF11023 Zinc-ribbon containing domain AS54_RS03970 PF01709 Transcriptional regulator AS54_RS03975 PF13344 Haloacid dehalogenase-like hydrolase AS54_RS03975 PF00293 NUDIX domain AS54_RS03980 PF00905 Penicillin binding protein transpeptidase domain AS54_RS03980 PF00912 Transglycosylase AS54_RS03985 PF13462 Thioredoxin AS54_RS03995 PF08331 Domain of unknown function (DUF1730) AS54_RS04000 PF12671 Putative amidase domain AS54_RS04005 PF00588 SpoU rRNA Methylase family AS54_RS04010 PF00563 EAL domain AS54_RS04010 PF00990 Diguanylate cyclase, GGDEF domain AS54_RS04010 PF00498 FHA domain AS54_RS04020 PF08298 PrkA AAA domain AS54_RS04020 PF06798 PrkA serine protein kinase C-terminal domain AS54_RS04030 PF04285 Protein of unknown function (DUF444) AS54_RS04040 PF02028 BCCT, betaine/carnitine/choline family transporter AS54_RS04045 PF18496 Collagenase G catalytic helper subdomain AS54_RS04045 PF01752 Collagenase AS54_RS04045 PF08453 Peptidase family M9 N-terminal AS54_RS04055 PF15975 Flotillin AS54_RS04055 PF01145 SPFH domain / Band 7 family AS54_RS04060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS04060 PF00672 HAMP domain AS54_RS04060 PF02743 Cache domain AS54_RS04065 PF00989 PAS fold AS54_RS04065 PF17203 Single cache domain 3 AS54_RS04065 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS54_RS04065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS04070 PF12431 Transcriptional regulator AS54_RS04070 PF00072 Response regulator receiver domain AS54_RS04075 PF03600 Citrate transporter AS54_RS04095 PF00149 Calcineurin-like phosphoesterase AS54_RS04100 PF00486 Transcriptional regulatory protein, C terminal AS54_RS04100 PF00072 Response regulator receiver domain AS54_RS04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS04105 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS04115 PF13529 Peptidase_C39 like family AS54_RS04120 PF00672 HAMP domain AS54_RS04120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS04120 PF02743 Cache domain AS54_RS04125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS04125 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS54_RS04125 PF00989 PAS fold AS54_RS04125 PF17203 Single cache domain 3 AS54_RS04130 PF00072 Response regulator receiver domain AS54_RS04135 PF03390 2-hydroxycarboxylate transporter family AS54_RS04140 PF03949 Malic enzyme, NAD binding domain AS54_RS04140 PF00390 Malic enzyme, N-terminal domain AS54_RS04150 PF00892 EamA-like transporter family AS54_RS04155 PF00155 Aminotransferase class I and II AS54_RS04155 PF00392 Bacterial regulatory proteins, gntR family AS54_RS04165 PF00989 PAS fold AS54_RS04165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS04165 PF00672 HAMP domain AS54_RS04165 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS04165 PF18698 Histidine kinase sensor domain AS54_RS04170 PF00072 Response regulator receiver domain AS54_RS04170 PF00486 Transcriptional regulatory protein, C terminal AS54_RS04180 PF13508 Acetyltransferase (GNAT) domain AS54_RS04180 PF00583 Acetyltransferase (GNAT) family AS54_RS04185 PF02634 FdhD/NarQ family AS54_RS04190 PF00037 4Fe-4S binding domain AS54_RS04190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS54_RS04190 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS54_RS04190 PF01568 Molydopterin dinucleotide binding domain AS54_RS04190 PF00384 Molybdopterin oxidoreductase AS54_RS04195 PF07849 Protein of unknown function (DUF1641) AS54_RS04205 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS54_RS04205 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS54_RS04210 PF13520 Amino acid permease AS54_RS04215 PF01022 Bacterial regulatory protein, arsR family AS54_RS04220 PF00403 Heavy-metal-associated domain AS54_RS04225 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AS54_RS04225 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AS54_RS04225 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AS54_RS04235 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS54_RS04235 PF01447 Thermolysin metallopeptidase, catalytic domain AS54_RS04235 PF03413 Peptidase propeptide and YPEB domain AS54_RS04235 PF07504 Fungalysin/Thermolysin Propeptide Motif AS54_RS04255 PF04294 VanW like protein AS54_RS04260 PF03816 Cell envelope-related transcriptional attenuator domain AS54_RS04265 PF01773 Na+ dependent nucleoside transporter N-terminus AS54_RS04265 PF07662 Na+ dependent nucleoside transporter C-terminus AS54_RS04270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS04275 PF00571 CBS domain AS54_RS04275 PF01595 Cyclin M transmembrane N-terminal domain AS54_RS04275 PF03471 Transporter associated domain AS54_RS04280 PF10415 Fumarase C C-terminus AS54_RS04280 PF00206 Lyase AS54_RS04285 PF02652 L-lactate permease AS54_RS04290 PF01022 Bacterial regulatory protein, arsR family AS54_RS04295 PF13333 Integrase core domain AS54_RS04295 PF00665 Integrase core domain AS54_RS04295 PF13276 HTH-like domain AS54_RS04305 PF08141 Small acid-soluble spore protein H family AS54_RS04310 PF00854 POT family AS54_RS04315 PF01497 Periplasmic binding protein AS54_RS04320 PF01032 FecCD transport family AS54_RS04325 PF01032 FecCD transport family AS54_RS04330 PF00005 ABC transporter AS54_RS04335 PF08241 Methyltransferase domain AS54_RS04340 PF00155 Aminotransferase class I and II AS54_RS04345 PF01370 NAD dependent epimerase/dehydratase family AS54_RS04350 PF00156 Phosphoribosyl transferase domain AS54_RS04355 PF13344 Haloacid dehalogenase-like hydrolase AS54_RS04355 PF00293 NUDIX domain AS54_RS04360 PF00092 von Willebrand factor type A domain AS54_RS04365 PF07728 AAA domain (dynein-related subfamily) AS54_RS04370 PF13091 PLD-like domain AS54_RS04370 PF13396 Phospholipase_D-nuclease N-terminal AS54_RS04385 PF13520 Amino acid permease AS54_RS04390 PF00392 Bacterial regulatory proteins, gntR family AS54_RS04390 PF07702 UTRA domain AS54_RS04395 PF00367 phosphotransferase system, EIIB AS54_RS04395 PF02378 Phosphotransferase system, EIIC AS54_RS04400 PF16657 Maltogenic Amylase, C-terminal domain AS54_RS04400 PF00128 Alpha amylase, catalytic domain AS54_RS04415 PF03323 Bacillus/Clostridium GerA spore germination protein AS54_RS04420 PF07730 Histidine kinase AS54_RS04420 PF13492 GAF domain AS54_RS04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS04425 PF00072 Response regulator receiver domain AS54_RS04425 PF00196 Bacterial regulatory proteins, luxR family AS54_RS04430 PF13860 FlgD Ig-like domain AS54_RS04430 PF02225 PA domain AS54_RS04430 PF05922 Peptidase inhibitor I9 AS54_RS04430 PF00082 Subtilase family AS54_RS04435 PF12389 Camelysin metallo-endopeptidase AS54_RS04445 PF01636 Phosphotransferase enzyme family AS54_RS04450 PF01235 Sodium:alanine symporter family AS54_RS04455 PF00005 ABC transporter AS54_RS04460 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS54_RS04465 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS04470 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS04475 PF00324 Amino acid permease AS54_RS04500 PF08279 HTH domain AS54_RS04500 PF13280 WYL domain AS54_RS04505 PF01872 RibD C-terminal domain AS54_RS04510 PF00989 PAS fold AS54_RS04510 PF00672 HAMP domain AS54_RS04510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS04510 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS04510 PF18698 Histidine kinase sensor domain AS54_RS04515 PF00072 Response regulator receiver domain AS54_RS04515 PF00486 Transcriptional regulatory protein, C terminal AS54_RS04525 PF00916 Sulfate permease family AS54_RS04525 PF01740 STAS domain AS54_RS04530 PF00582 Universal stress protein family AS54_RS04540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS04545 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS04550 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS04555 PF00005 ABC transporter AS54_RS04555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS54_RS04560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS54_RS04560 PF00005 ABC transporter AS54_RS04565 PF07690 Major Facilitator Superfamily AS54_RS04570 PF01047 MarR family AS54_RS04575 PF07690 Major Facilitator Superfamily AS54_RS04580 PF00356 Bacterial regulatory proteins, lacI family AS54_RS04585 PF00294 pfkB family carbohydrate kinase AS54_RS04590 PF05025 RbsD / FucU transport protein family AS54_RS04595 PF00005 ABC transporter AS54_RS04600 PF02653 Branched-chain amino acid transport system / permease component AS54_RS04605 PF13407 Periplasmic binding protein domain AS54_RS04610 PF00923 Transaldolase/Fructose-6-phosphate aldolase AS54_RS04615 PF05547 Immune inhibitor A peptidase M6 AS54_RS04625 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS04625 PF00107 Zinc-binding dehydrogenase AS54_RS04635 PF00882 Zinc dependent phospholipase C AS54_RS04640 PF03372 Endonuclease/Exonuclease/phosphatase family AS54_RS04665 PF02673 Bacitracin resistance protein BacA AS54_RS04670 PF00672 HAMP domain AS54_RS04670 PF02743 Cache domain AS54_RS04670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS04675 PF06725 3D domain AS54_RS04675 PF01476 LysM domain AS54_RS04680 PF01381 Helix-turn-helix AS54_RS04690 PF04203 Sortase domain AS54_RS04695 PF00854 POT family AS54_RS04700 PF05525 Branched-chain amino acid transport protein AS54_RS04715 PF00324 Amino acid permease AS54_RS04720 PF00860 Permease family AS54_RS04735 PF13673 Acetyltransferase (GNAT) domain AS54_RS04745 PF02254 TrkA-N domain AS54_RS04745 PF02080 TrkA-C domain AS54_RS04745 PF00999 Sodium/hydrogen exchanger family AS54_RS04755 PF00510 Cytochrome c oxidase subunit III AS54_RS04760 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS54_RS04765 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AS54_RS04770 PF00324 Amino acid permease AS54_RS04775 PF13529 Peptidase_C39 like family AS54_RS04780 PF07687 Peptidase dimerisation domain AS54_RS04780 PF01546 Peptidase family M20/M25/M40 AS54_RS04785 PF11755 Protein of unknown function (DUF3311) AS54_RS04790 PF00474 Sodium:solute symporter family AS54_RS04795 PF03323 Bacillus/Clostridium GerA spore germination protein AS54_RS04800 PF03845 Spore germination protein AS54_RS04805 PF05504 Spore germination B3/ GerAC like, C-terminal AS54_RS04815 PF02421 Ferrous iron transport protein B AS54_RS04815 PF07670 Nucleoside recognition AS54_RS04815 PF07664 Ferrous iron transport protein B C terminus AS54_RS04815 PF17910 FeoB cytosolic helical domain AS54_RS04820 PF02421 Ferrous iron transport protein B AS54_RS04820 PF17910 FeoB cytosolic helical domain AS54_RS04820 PF07664 Ferrous iron transport protein B C terminus AS54_RS04820 PF07670 Nucleoside recognition AS54_RS04825 PF17910 FeoB cytosolic helical domain AS54_RS04825 PF02421 Ferrous iron transport protein B AS54_RS04825 PF07670 Nucleoside recognition AS54_RS04825 PF07664 Ferrous iron transport protein B C terminus AS54_RS04825 PF04023 FeoA domain AS54_RS04830 PF12849 PBP superfamily domain AS54_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS04850 PF00873 AcrB/AcrD/AcrF family AS54_RS04970 PF00571 CBS domain AS54_RS04990 PF00246 Zinc carboxypeptidase AS54_RS04990 PF08239 Bacterial SH3 domain AS54_RS04995 PF03070 TENA/THI-4/PQQC family AS54_RS05000 PF00005 ABC transporter AS54_RS05005 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS05010 PF09084 NMT1/THI5 like AS54_RS05015 PF02581 Thiamine monophosphate synthase AS54_RS05020 PF01266 FAD dependent oxidoreductase AS54_RS05025 PF02597 ThiS family AS54_RS05030 PF05690 Thiazole biosynthesis protein ThiG AS54_RS05035 PF00899 ThiF family AS54_RS05040 PF08543 Phosphomethylpyrimidine kinase AS54_RS05070 PF03814 Potassium-transporting ATPase A subunit AS54_RS05080 PF02669 K+-transporting ATPase, c chain AS54_RS05085 PF02702 Osmosensitive K+ channel His kinase sensor domain AS54_RS05090 PF07690 Major Facilitator Superfamily AS54_RS05095 PF01047 MarR family AS54_RS05120 PF12704 MacB-like periplasmic core domain AS54_RS05120 PF02687 FtsX-like permease family AS54_RS05120 PF00005 ABC transporter AS54_RS05130 PF00860 Permease family AS54_RS05140 PF17969 L,D-transpeptidase C-terminal domain AS54_RS05140 PF03734 L,D-transpeptidase catalytic domain AS54_RS05150 PF00294 pfkB family carbohydrate kinase AS54_RS05155 PF00251 Glycosyl hydrolases family 32 N-terminal domain AS54_RS05155 PF08244 Glycosyl hydrolases family 32 C terminal AS54_RS05160 PF02378 Phosphotransferase system, EIIC AS54_RS05160 PF00367 phosphotransferase system, EIIB AS54_RS05165 PF00356 Bacterial regulatory proteins, lacI family AS54_RS05165 PF13407 Periplasmic binding protein domain AS54_RS05175 PF00085 Thioredoxin AS54_RS05180 PF02600 Disulfide bond formation protein DsbB AS54_RS05185 PF14148 YhdB-like protein AS54_RS05195 PF03845 Spore germination protein AS54_RS05205 PF03323 Bacillus/Clostridium GerA spore germination protein AS54_RS05215 PF00881 Nitroreductase family AS54_RS05220 PF04293 SpoVR like protein AS54_RS05230 PF02583 Metal-sensitive transcriptional repressor AS54_RS05235 PF01206 Sulfurtransferase TusA AS54_RS05235 PF00581 Rhodanese-like domain AS54_RS05240 PF00581 Rhodanese-like domain AS54_RS05240 PF00753 Metallo-beta-lactamase superfamily AS54_RS05245 PF01206 Sulfurtransferase TusA AS54_RS05250 PF00581 Rhodanese-like domain AS54_RS05260 PF13686 DsrE/DsrF/DrsH-like family AS54_RS05265 PF01925 Sulfite exporter TauE/SafE AS54_RS05275 PF03816 Cell envelope-related transcriptional attenuator domain AS54_RS05280 PF00107 Zinc-binding dehydrogenase AS54_RS05280 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS05285 PF02690 Na+/Pi-cotransporter AS54_RS05290 PF07690 Major Facilitator Superfamily AS54_RS05300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS54_RS05300 PF05043 Mga helix-turn-helix domain AS54_RS05300 PF08279 HTH domain AS54_RS05300 PF00874 PRD domain AS54_RS05305 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AS54_RS05310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS54_RS05315 PF02378 Phosphotransferase system, EIIC AS54_RS05330 PF06725 3D domain AS54_RS05330 PF01476 LysM domain AS54_RS05335 PF12704 MacB-like periplasmic core domain AS54_RS05335 PF02687 FtsX-like permease family AS54_RS05340 PF00005 ABC transporter AS54_RS05350 PF09529 Integral membrane protein (intg_mem_TP0381) AS54_RS05365 PF02687 FtsX-like permease family AS54_RS05370 PF05525 Branched-chain amino acid transport protein AS54_RS05375 PF05067 Manganese containing catalase AS54_RS05380 PF12652 CotJB protein AS54_RS05385 PF11007 Spore coat associated protein JA (CotJA) AS54_RS05400 PF02735 Ku70/Ku80 beta-barrel domain AS54_RS05410 PF09335 SNARE associated Golgi protein AS54_RS05445 PF13520 Amino acid permease AS54_RS05450 PF00999 Sodium/hydrogen exchanger family AS54_RS05460 PF01380 SIS domain AS54_RS05460 PF01418 Helix-turn-helix domain, rpiR family AS54_RS05465 PF01380 SIS domain AS54_RS05470 PF00367 phosphotransferase system, EIIB AS54_RS05470 PF02378 Phosphotransferase system, EIIC AS54_RS05485 PF07681 DoxX AS54_RS05500 PF00892 EamA-like transporter family AS54_RS05505 PF01037 Lrp/AsnC ligand binding domain AS54_RS05515 PF00893 Small Multidrug Resistance protein AS54_RS05520 PF00893 Small Multidrug Resistance protein AS54_RS05525 PF17934 Tetracyclin repressor-like, C-terminal domain AS54_RS05525 PF00440 Bacterial regulatory proteins, tetR family AS54_RS05530 PF07690 Major Facilitator Superfamily AS54_RS05535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS05535 PF12793 Sugar transport-related sRNA regulator N-term AS54_RS05540 PF07690 Major Facilitator Superfamily AS54_RS05550 PF01965 DJ-1/PfpI family AS54_RS05555 PF00199 Catalase AS54_RS05555 PF18011 C-terminal domain found in long catalases AS54_RS05555 PF06628 Catalase-related immune-responsive AS54_RS05565 PF13520 Amino acid permease AS54_RS05570 PF01177 Asp/Glu/Hydantoin racemase AS54_RS05580 PF00171 Aldehyde dehydrogenase family AS54_RS05590 PF00005 ABC transporter AS54_RS05590 PF00664 ABC transporter transmembrane region AS54_RS05595 PF00005 ABC transporter AS54_RS05595 PF00664 ABC transporter transmembrane region AS54_RS05600 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS54_RS05605 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS05610 PF00005 ABC transporter AS54_RS05615 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS54_RS05625 PF14398 YheC/D like ATP-grasp AS54_RS05635 PF04286 Protein of unknown function (DUF445) AS54_RS05640 PF06133 Control of competence regulator ComK, YlbF/YmcA AS54_RS05655 PF00205 Thiamine pyrophosphate enzyme, central domain AS54_RS05655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS54_RS05655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS54_RS05660 PF03306 Alpha-acetolactate decarboxylase AS54_RS05665 PF02245 Methylpurine-DNA glycosylase (MPG) AS54_RS05675 PF01510 N-acetylmuramoyl-L-alanine amidase AS54_RS05675 PF01471 Putative peptidoglycan binding domain AS54_RS05680 PF04055 Radical SAM superfamily AS54_RS05685 PF13193 AMP-binding enzyme C-terminal domain AS54_RS05685 PF00501 AMP-binding enzyme AS54_RS05695 PF00916 Sulfate permease family AS54_RS05695 PF01740 STAS domain AS54_RS05720 PF01043 SecA preprotein cross-linking domain AS54_RS05720 PF07517 SecA DEAD-like domain AS54_RS05720 PF07516 SecA Wing and Scaffold domain AS54_RS05725 PF14667 Polysaccharide biosynthesis C-terminal domain AS54_RS05725 PF01943 Polysaccharide biosynthesis protein AS54_RS05735 PF00395 S-layer homology domain AS54_RS05735 PF02368 Bacterial Ig-like domain (group 2) AS54_RS05735 PF13205 Bacterial Ig-like domain AS54_RS05740 PF00395 S-layer homology domain AS54_RS05750 PF03062 MBOAT, membrane-bound O-acyltransferase family AS54_RS05760 PF00378 Enoyl-CoA hydratase/isomerase AS54_RS05780 PF05343 M42 glutamyl aminopeptidase AS54_RS05785 PF01520 N-acetylmuramoyl-L-alanine amidase AS54_RS05785 PF00395 S-layer homology domain AS54_RS05795 PF11121 Protein of unknown function (DUF2639) AS54_RS05800 PF05544 Proline racemase AS54_RS05805 PF02423 Ornithine cyclodeaminase/mu-crystallin family AS54_RS05815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS05820 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS05825 PF12911 N-terminal TM domain of oligopeptide transport permease C AS54_RS05825 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS05830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS54_RS05830 PF00005 ABC transporter AS54_RS05835 PF00005 ABC transporter AS54_RS05835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS54_RS05865 PF00083 Sugar (and other) transporter AS54_RS05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS05870 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS54_RS05875 PF08279 HTH domain AS54_RS05875 PF12431 Transcriptional regulator AS54_RS05875 PF00072 Response regulator receiver domain AS54_RS05880 PF03401 Tripartite tricarboxylate transporter family receptor AS54_RS05890 PF00589 Phage integrase family AS54_RS05895 PF00145 C-5 cytosine-specific DNA methylase AS54_RS05900 PF00145 C-5 cytosine-specific DNA methylase AS54_RS05905 PF00665 Integrase core domain AS54_RS05905 PF13276 HTH-like domain AS54_RS05905 PF13333 Integrase core domain AS54_RS05915 PF07728 AAA domain (dynein-related subfamily) AS54_RS05915 PF12102 Domain of unknown function (DUF3578) AS54_RS05930 PF07728 AAA domain (dynein-related subfamily) AS54_RS05935 PF09563 LlaJI restriction endonuclease AS54_RS05955 PF00772 DnaB-like helicase N terminal domain AS54_RS05955 PF03796 DnaB-like helicase C terminal domain AS54_RS05970 PF01925 Sulfite exporter TauE/SafE AS54_RS05980 PF07690 Major Facilitator Superfamily AS54_RS06030 PF07993 Male sterility protein AS54_RS06030 PF00550 Phosphopantetheine attachment site AS54_RS06035 PF18665 Tetracyclin repressor-like, C-terminal domain AS54_RS06035 PF00440 Bacterial regulatory proteins, tetR family AS54_RS06050 PF01066 CDP-alcohol phosphatidyltransferase AS54_RS06080 PF02733 Dak1 domain AS54_RS06095 PF02525 Flavodoxin-like fold AS54_RS06100 PF02082 Transcriptional regulator AS54_RS06105 PF02734 DAK2 domain AS54_RS06115 PF18801 response regulator aspartate phosphatase H, N terminal AS54_RS06120 PF01966 HD domain AS54_RS06120 PF00672 HAMP domain AS54_RS06140 PF00395 S-layer homology domain AS54_RS06165 PF11181 Heat induced stress protein YflT AS54_RS06170 PF05532 CsbD-like AS54_RS06185 PF01740 STAS domain AS54_RS06190 PF13581 Histidine kinase-like ATPase domain AS54_RS06195 PF04539 Sigma-70 region 3 AS54_RS06195 PF04545 Sigma-70, region 4 AS54_RS06195 PF04542 Sigma-70 region 2 AS54_RS06205 PF13426 PAS domain AS54_RS06205 PF07228 Stage II sporulation protein E (SpoIIE) AS54_RS06210 PF01739 CheR methyltransferase, SAM binding domain AS54_RS06210 PF03705 CheR methyltransferase, all-alpha domain AS54_RS06215 PF00072 Response regulator receiver domain AS54_RS06215 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS06215 PF01627 Hpt domain AS54_RS06215 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS54_RS06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS06240 PF01906 Putative heavy-metal-binding AS54_RS06250 PF00107 Zinc-binding dehydrogenase AS54_RS06250 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS06265 PF11121 Protein of unknown function (DUF2639) AS54_RS06280 PF00149 Calcineurin-like phosphoesterase AS54_RS06285 PF13514 AAA domain AS54_RS06290 PF01966 HD domain AS54_RS06290 PF01336 OB-fold nucleic acid binding domain AS54_RS06315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS06320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS06325 PF18801 response regulator aspartate phosphatase H, N terminal AS54_RS06335 PF08386 TAP-like protein AS54_RS06335 PF00561 alpha/beta hydrolase fold AS54_RS06355 PF04309 Glycerol-3-phosphate responsive antiterminator AS54_RS06360 PF00230 Major intrinsic protein AS54_RS06365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS54_RS06365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS54_RS06370 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AS54_RS06370 PF01266 FAD dependent oxidoreductase AS54_RS06390 PF08281 Sigma-70, region 4 AS54_RS06390 PF04542 Sigma-70 region 2 AS54_RS06415 PF07690 Major Facilitator Superfamily AS54_RS06420 PF07690 Major Facilitator Superfamily AS54_RS06430 PF13538 UvrD-like helicase C-terminal domain AS54_RS06455 PF01047 MarR family AS54_RS06460 PF12732 YtxH-like protein AS54_RS06465 PF01230 HIT domain AS54_RS06470 PF00005 ABC transporter AS54_RS06475 PF05975 Bacterial ABC transporter protein EcsB AS54_RS06480 PF12787 EcsC protein family AS54_RS06535 PF17934 Tetracyclin repressor-like, C-terminal domain AS54_RS06535 PF00440 Bacterial regulatory proteins, tetR family AS54_RS06545 PF03703 Bacterial PH domain AS54_RS06550 PF03703 Bacterial PH domain AS54_RS06570 PF00395 S-layer homology domain AS54_RS06570 PF01520 N-acetylmuramoyl-L-alanine amidase AS54_RS06605 PF03703 Bacterial PH domain AS54_RS06610 PF03703 Bacterial PH domain AS54_RS06615 PF03992 Antibiotic biosynthesis monooxygenase AS54_RS06620 PF00905 Penicillin binding protein transpeptidase domain AS54_RS06620 PF00912 Transglycosylase AS54_RS06625 PF01208 Uroporphyrinogen decarboxylase (URO-D) AS54_RS06630 PF00762 Ferrochelatase AS54_RS06635 PF01593 Flavin containing amine oxidoreductase AS54_RS06665 PF03965 Penicillinase repressor AS54_RS06675 PF00440 Bacterial regulatory proteins, tetR family AS54_RS06675 PF17932 Tetracyclin repressor-like, C-terminal domain AS54_RS06720 PF08279 HTH domain AS54_RS06720 PF13280 WYL domain AS54_RS06725 PF00356 Bacterial regulatory proteins, lacI family AS54_RS06730 PF14149 YhfH-like protein AS54_RS06735 PF12706 Beta-lactamase superfamily domain AS54_RS06740 PF10437 Bacterial lipoate protein ligase C-terminus AS54_RS06740 PF03099 Biotin/lipoate A/B protein ligase family AS54_RS06750 PF00501 AMP-binding enzyme AS54_RS06750 PF13193 AMP-binding enzyme C-terminal domain AS54_RS06770 PF05593 RHS Repeat AS54_RS06815 PF12146 Serine aminopeptidase, S33 AS54_RS06820 PF00149 Calcineurin-like phosphoesterase AS54_RS06830 PF01966 HD domain AS54_RS06840 PF04542 Sigma-70 region 2 AS54_RS06840 PF08281 Sigma-70, region 4 AS54_RS06845 PF12833 Helix-turn-helix domain AS54_RS06845 PF06445 GyrI-like small molecule binding domain AS54_RS06850 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS06855 PF00486 Transcriptional regulatory protein, C terminal AS54_RS06855 PF00072 Response regulator receiver domain AS54_RS06875 PF16491 CAAX prenyl protease N-terminal, five membrane helices AS54_RS06875 PF01435 Peptidase family M48 AS54_RS06880 PF00892 EamA-like transporter family AS54_RS06885 PF00150 Cellulase (glycosyl hydrolase family 5) AS54_RS06885 PF03424 Carbohydrate binding domain (family 17/28) AS54_RS06885 PF00395 S-layer homology domain AS54_RS06895 PF00395 S-layer homology domain AS54_RS06900 PF01274 Malate synthase AS54_RS06905 PF00463 Isocitrate lyase family AS54_RS06915 PF00313 'Cold-shock' DNA-binding domain AS54_RS06935 PF09335 SNARE associated Golgi protein AS54_RS06940 PF10502 Signal peptidase, peptidase S26 AS54_RS06945 PF12705 PD-(D/E)XK nuclease superfamily AS54_RS06945 PF13361 UvrD-like helicase C-terminal domain AS54_RS06950 PF13361 UvrD-like helicase C-terminal domain AS54_RS06950 PF00580 UvrD/REP helicase N-terminal domain AS54_RS06950 PF12705 PD-(D/E)XK nuclease superfamily AS54_RS06960 PF10676 Spore germination protein gerPA/gerPF AS54_RS06965 PF10970 Spore germination protein GerPE AS54_RS06975 PF10737 Spore germination protein GerPC AS54_RS06980 PF10803 Spore germination GerPB AS54_RS06985 PF10676 Spore germination protein gerPA/gerPF AS54_RS06990 PF09388 Spo0E like sporulation regulatory protein AS54_RS06995 PF01557 Fumarylacetoacetate (FAA) hydrolase family AS54_RS07005 PF00202 Aminotransferase class-III AS54_RS07010 PF07457 Protein of unknown function (DUF1516) AS54_RS07020 PF00733 Asparagine synthase AS54_RS07020 PF13537 Glutamine amidotransferase domain AS54_RS07025 PF00762 Ferrochelatase AS54_RS07030 PF00199 Catalase AS54_RS07030 PF06628 Catalase-related immune-responsive AS54_RS07035 PF00909 Ammonium Transporter Family AS54_RS07045 PF00128 Alpha amylase, catalytic domain AS54_RS07055 PF04461 Protein of unknown function (DUF520) AS54_RS07060 PF13509 S1 domain AS54_RS07060 PF17783 CvfB-like winged helix domain AS54_RS07070 PF00639 PPIC-type PPIASE domain AS54_RS07080 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS07080 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS54_RS07085 PF12758 Protein of unknown function (DUF3813) AS54_RS07105 PF14168 YjzC-like protein AS54_RS07110 PF10431 C-terminal, D2-small domain, of ClpB protein AS54_RS07110 PF00004 ATPase family associated with various cellular activities (AAA) AS54_RS07110 PF07724 AAA domain (Cdc48 subfamily) AS54_RS07110 PF17871 AAA lid domain AS54_RS07110 PF02861 Clp amino terminal domain, pathogenicity island component AS54_RS07130 PF10815 ComZ AS54_RS07135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS54_RS07135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS54_RS07140 PF00109 Beta-ketoacyl synthase, N-terminal domain AS54_RS07140 PF02801 Beta-ketoacyl synthase, C-terminal domain AS54_RS07145 PF10026 Predicted Zn-dependent protease (DUF2268) AS54_RS07150 PF12227 Protein of unknown function (DUF3603) AS54_RS07155 PF00579 tRNA synthetases class I (W and Y) AS54_RS07165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS07170 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS07175 PF12911 N-terminal TM domain of oligopeptide transport permease C AS54_RS07175 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS07180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS54_RS07180 PF00005 ABC transporter AS54_RS07185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS54_RS07185 PF00005 ABC transporter AS54_RS07190 PF01554 MatE AS54_RS07195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS07210 PF03960 ArsC family AS54_RS07215 PF03741 Integral membrane protein TerC family AS54_RS07220 PF05389 Negative regulator of genetic competence (MecA) AS54_RS07225 PF13091 PLD-like domain AS54_RS07225 PF13396 Phospholipase_D-nuclease N-terminal AS54_RS07235 PF01432 Peptidase family M3 AS54_RS07235 PF08439 Oligopeptidase F AS54_RS07250 PF01152 Bacterial-like globin AS54_RS07255 PF01928 CYTH domain AS54_RS07265 PF04607 Region found in RelA / SpoT proteins AS54_RS07270 PF01513 ATP-NAD kinase AS54_RS07275 PF00849 RNA pseudouridylate synthase AS54_RS07285 PF00149 Calcineurin-like phosphoesterase AS54_RS07290 PF01098 Cell cycle protein AS54_RS07295 PF00535 Glycosyl transferase family 2 AS54_RS07300 PF08241 Methyltransferase domain AS54_RS07305 PF05711 Macrocin-O-methyltransferase (TylF) AS54_RS07315 PF13181 Tetratricopeptide repeat AS54_RS07315 PF00535 Glycosyl transferase family 2 AS54_RS07335 PF00483 Nucleotidyl transferase AS54_RS07340 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AS54_RS07345 PF16363 GDP-mannose 4,6 dehydratase AS54_RS07350 PF04321 RmlD substrate binding domain AS54_RS07370 PF07098 Protein of unknown function (DUF1360) AS54_RS07390 PF00580 UvrD/REP helicase N-terminal domain AS54_RS07390 PF13361 UvrD-like helicase C-terminal domain AS54_RS07395 PF13673 Acetyltransferase (GNAT) domain AS54_RS07405 PF00756 Putative esterase AS54_RS07420 PF02368 Bacterial Ig-like domain (group 2) AS54_RS07425 PF00474 Sodium:solute symporter family AS54_RS07435 PF00425 chorismate binding enzyme AS54_RS07435 PF04715 Anthranilate synthase component I, N terminal region AS54_RS07440 PF00591 Glycosyl transferase family, a/b domain AS54_RS07440 PF00117 Glutamine amidotransferase class-I AS54_RS07440 PF02885 Glycosyl transferase family, helical bundle domain AS54_RS07445 PF00591 Glycosyl transferase family, a/b domain AS54_RS07445 PF02885 Glycosyl transferase family, helical bundle domain AS54_RS07450 PF00218 Indole-3-glycerol phosphate synthase AS54_RS07455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AS54_RS07460 PF00291 Pyridoxal-phosphate dependent enzyme AS54_RS07465 PF00290 Tryptophan synthase alpha chain AS54_RS07475 PF02652 L-lactate permease AS54_RS07480 PF10042 Uncharacterized conserved protein (DUF2278) AS54_RS07500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS54_RS07500 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS07525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS54_RS07525 PF00364 Biotin-requiring enzyme AS54_RS07525 PF02817 e3 binding domain AS54_RS07530 PF02779 Transketolase, pyrimidine binding domain AS54_RS07530 PF16870 2-oxoglutarate dehydrogenase C-terminal AS54_RS07530 PF00676 Dehydrogenase E1 component AS54_RS07535 PF01381 Helix-turn-helix AS54_RS07585 PF00202 Aminotransferase class-III AS54_RS07600 PF13732 Domain of unknown function (DUF4162) AS54_RS07600 PF00005 ABC transporter AS54_RS07625 PF13649 Methyltransferase domain AS54_RS07635 PF07943 Penicillin-binding protein 5, C-terminal domain AS54_RS07635 PF00768 D-alanyl-D-alanine carboxypeptidase AS54_RS07645 PF12389 Camelysin metallo-endopeptidase AS54_RS07655 PF12389 Camelysin metallo-endopeptidase AS54_RS07660 PF01381 Helix-turn-helix AS54_RS07660 PF08671 Anti-repressor SinI AS54_RS07670 PF05547 Immune inhibitor A peptidase M6 AS54_RS07675 PF00171 Aldehyde dehydrogenase family AS54_RS07680 PF08402 TOBE domain AS54_RS07680 PF00005 ABC transporter AS54_RS07685 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS07690 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS07695 PF13416 Bacterial extracellular solute-binding protein AS54_RS07705 PF03176 MMPL family AS54_RS07715 PF01479 S4 domain AS54_RS07715 PF00849 RNA pseudouridylate synthase AS54_RS07725 PF00188 Cysteine-rich secretory protein family AS54_RS07730 PF02754 Cysteine-rich domain AS54_RS07730 PF13183 4Fe-4S dicluster domain AS54_RS07735 PF02913 FAD linked oxidases, C-terminal domain AS54_RS07735 PF01565 FAD binding domain AS54_RS07740 PF17853 GGDEF-like domain AS54_RS07740 PF13556 PucR C-terminal helix-turn-helix domain AS54_RS07740 PF05651 Putative sugar diacid recognition AS54_RS07750 PF00072 Response regulator receiver domain AS54_RS07750 PF00486 Transcriptional regulatory protein, C terminal AS54_RS07755 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS07755 PF18698 Histidine kinase sensor domain AS54_RS07755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS07755 PF00989 PAS fold AS54_RS07755 PF00672 HAMP domain AS54_RS07760 PF07729 FCD domain AS54_RS07760 PF00392 Bacterial regulatory proteins, gntR family AS54_RS07765 PF02754 Cysteine-rich domain AS54_RS07770 PF02589 LUD domain AS54_RS07770 PF13183 4Fe-4S dicluster domain AS54_RS07770 PF11870 Domain of unknown function (DUF3390) AS54_RS07775 PF02589 LUD domain AS54_RS07780 PF06750 Bacterial Peptidase A24 N-terminal domain AS54_RS07780 PF01478 Type IV leader peptidase family AS54_RS07790 PF01226 Formate/nitrite transporter AS54_RS07795 PF03741 Integral membrane protein TerC family AS54_RS07800 PF02386 Cation transport protein AS54_RS07805 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS54_RS07810 PF01575 MaoC like domain AS54_RS07835 PF00561 alpha/beta hydrolase fold AS54_RS07840 PF01266 FAD dependent oxidoreductase AS54_RS07845 PF02386 Cation transport protein AS54_RS07865 PF08402 TOBE domain AS54_RS07865 PF00005 ABC transporter AS54_RS07870 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS07875 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS07880 PF00266 Aminotransferase class-V AS54_RS07890 PF08220 DeoR-like helix-turn-helix domain AS54_RS07890 PF00455 DeoR C terminal sensor domain AS54_RS07900 PF01520 N-acetylmuramoyl-L-alanine amidase AS54_RS07900 PF00395 S-layer homology domain AS54_RS07905 PF00596 Class II Aldolase and Adducin N-terminal domain AS54_RS07915 PF04748 Divergent polysaccharide deacetylase AS54_RS07920 PF09388 Spo0E like sporulation regulatory protein AS54_RS07925 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS07925 PF02743 Cache domain AS54_RS07930 PF01047 MarR family AS54_RS07940 PF12867 DinB superfamily AS54_RS07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS07950 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS07950 PF00989 PAS fold AS54_RS07950 PF13188 PAS domain AS54_RS07950 PF13426 PAS domain AS54_RS07955 PF06508 Queuosine biosynthesis protein QueC AS54_RS07960 PF01242 6-pyruvoyl tetrahydropterin synthase AS54_RS07965 PF04055 Radical SAM superfamily AS54_RS07970 PF14489 QueF-like protein AS54_RS07975 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) AS54_RS08015 PF07972 NrdI Flavodoxin like AS54_RS08020 PF02867 Ribonucleotide reductase, barrel domain AS54_RS08020 PF00317 Ribonucleotide reductase, all-alpha domain AS54_RS08020 PF08343 Ribonucleotide reductase N-terminal AS54_RS08025 PF01844 HNH endonuclease AS54_RS08030 PF08343 Ribonucleotide reductase N-terminal AS54_RS08030 PF00317 Ribonucleotide reductase, all-alpha domain AS54_RS08030 PF14528 LAGLIDADG-like domain AS54_RS08030 PF02867 Ribonucleotide reductase, barrel domain AS54_RS08035 PF00268 Ribonucleotide reductase, small chain AS54_RS08040 PF00392 Bacterial regulatory proteins, gntR family AS54_RS08045 PF00005 ABC transporter AS54_RS08055 PF00005 ABC transporter AS54_RS08075 PF01037 Lrp/AsnC ligand binding domain AS54_RS08085 PF00857 Isochorismatase family AS54_RS08095 PF17676 LD-carboxypeptidase C-terminal domain AS54_RS08095 PF02016 LD-carboxypeptidase N-terminal domain AS54_RS08100 PF03060 Nitronate monooxygenase AS54_RS08105 PF04914 DltD protein AS54_RS08110 PF00550 Phosphopantetheine attachment site AS54_RS08115 PF03062 MBOAT, membrane-bound O-acyltransferase family AS54_RS08120 PF00501 AMP-binding enzyme AS54_RS08120 PF13193 AMP-binding enzyme C-terminal domain AS54_RS08130 PF07687 Peptidase dimerisation domain AS54_RS08130 PF01546 Peptidase family M20/M25/M40 AS54_RS08140 PF00258 Flavodoxin AS54_RS08175 PF01554 MatE AS54_RS08180 PF02673 Bacitracin resistance protein BacA AS54_RS08195 PF01047 MarR family AS54_RS08205 PF00375 Sodium:dicarboxylate symporter family AS54_RS08210 PF02386 Cation transport protein AS54_RS08220 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AS54_RS08235 PF03698 Uncharacterised protein family (UPF0180) AS54_RS08250 PF01063 Amino-transferase class IV AS54_RS08255 PF00205 Thiamine pyrophosphate enzyme, central domain AS54_RS08255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS54_RS08255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS54_RS08260 PF01842 ACT domain AS54_RS08260 PF10369 Small subunit of acetolactate synthase AS54_RS08265 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AS54_RS08265 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AS54_RS08270 PF08502 LeuA allosteric (dimerisation) domain AS54_RS08270 PF00682 HMGL-like AS54_RS08275 PF00180 Isocitrate/isopropylmalate dehydrogenase AS54_RS08280 PF00330 Aconitase family (aconitate hydratase) AS54_RS08285 PF00694 Aconitase C-terminal domain AS54_RS08290 PF13393 Histidyl-tRNA synthetase AS54_RS08295 PF01634 ATP phosphoribosyltransferase AS54_RS08300 PF00815 Histidinol dehydrogenase AS54_RS08305 PF00475 Imidazoleglycerol-phosphate dehydratase AS54_RS08310 PF00117 Glutamine amidotransferase class-I AS54_RS08315 PF00977 Histidine biosynthesis protein AS54_RS08320 PF00977 Histidine biosynthesis protein AS54_RS08325 PF01502 Phosphoribosyl-AMP cyclohydrolase AS54_RS08330 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AS54_RS08335 PF02811 PHP domain AS54_RS08345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS54_RS08345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS54_RS08350 PF01066 CDP-alcohol phosphatidyltransferase AS54_RS08355 PF00884 Sulfatase AS54_RS08365 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AS54_RS08365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AS54_RS08375 PF01507 Phosphoadenosine phosphosulfate reductase family AS54_RS08380 PF01747 ATP-sulfurylase AS54_RS08380 PF14306 PUA-like domain AS54_RS08390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS54_RS08390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS54_RS08400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS54_RS08405 PF01903 CbiX AS54_RS08420 PF00209 Sodium:neurotransmitter symporter family AS54_RS08425 PF00665 Integrase core domain AS54_RS08425 PF13276 HTH-like domain AS54_RS08425 PF13333 Integrase core domain AS54_RS08440 PF00375 Sodium:dicarboxylate symporter family AS54_RS08450 PF03553 Na+/H+ antiporter family AS54_RS08465 PF09922 Cell wall-active antibiotics response 4TMS YvqF AS54_RS08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS08470 PF07730 Histidine kinase AS54_RS08470 PF00672 HAMP domain AS54_RS08475 PF00196 Bacterial regulatory proteins, luxR family AS54_RS08475 PF00072 Response regulator receiver domain AS54_RS08485 PF05525 Branched-chain amino acid transport protein AS54_RS08495 PF08241 Methyltransferase domain AS54_RS08520 PF00175 Oxidoreductase NAD-binding domain AS54_RS08520 PF00042 Globin AS54_RS08520 PF00970 Oxidoreductase FAD-binding domain AS54_RS08540 PF01925 Sulfite exporter TauE/SafE AS54_RS08545 PF01384 Phosphate transporter family AS54_RS08550 PF01865 Protein of unknown function DUF47 AS54_RS08555 PF00912 Transglycosylase AS54_RS08555 PF00905 Penicillin binding protein transpeptidase domain AS54_RS08570 PF00989 PAS fold AS54_RS08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS08570 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS08575 PF01904 Protein of unknown function DUF72 AS54_RS08585 PF00589 Phage integrase family AS54_RS08590 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS08590 PF00989 PAS fold AS54_RS08590 PF16736 Single Cache-like AS54_RS08595 PF01048 Phosphorylase superfamily AS54_RS08610 PF09924 Uncharacterised conserved protein (DUF2156) AS54_RS08610 PF03706 Lysylphosphatidylglycerol synthase TM region AS54_RS08625 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS54_RS08625 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS54_RS08630 PF07943 Penicillin-binding protein 5, C-terminal domain AS54_RS08630 PF00768 D-alanyl-D-alanine carboxypeptidase AS54_RS08635 PF07670 Nucleoside recognition AS54_RS08640 PF07670 Nucleoside recognition AS54_RS08645 PF00849 RNA pseudouridylate synthase AS54_RS08645 PF01479 S4 domain AS54_RS08650 PF00578 AhpC/TSA family AS54_RS08655 PF05140 ResB-like family AS54_RS08660 PF01578 Cytochrome C assembly protein AS54_RS08665 PF00072 Response regulator receiver domain AS54_RS08665 PF00486 Transcriptional regulatory protein, C terminal AS54_RS08670 PF00672 HAMP domain AS54_RS08670 PF18698 Histidine kinase sensor domain AS54_RS08670 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS08670 PF00989 PAS fold AS54_RS08670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS08675 PF01923 Cobalamin adenosyltransferase AS54_RS08680 PF01551 Peptidase family M23 AS54_RS08690 PF12822 ECF transporter, substrate-specific component AS54_RS08710 PF02517 CPBP intramembrane metalloprotease AS54_RS08720 PF00149 Calcineurin-like phosphoesterase AS54_RS08725 PF02607 B12 binding domain AS54_RS08725 PF13411 MerR HTH family regulatory protein AS54_RS08725 PF02310 B12 binding domain AS54_RS08730 PF05389 Negative regulator of genetic competence (MecA) AS54_RS08735 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS54_RS08735 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS54_RS08760 PF17763 Glutaminase/Asparaginase C-terminal domain AS54_RS08760 PF00710 Asparaginase, N-terminal AS54_RS08770 PF02224 Cytidylate kinase AS54_RS08775 PF00575 S1 RNA binding domain AS54_RS08780 PF01070 FMN-dependent dehydrogenase AS54_RS08785 PF14140 YpzI-like protein AS54_RS08795 PF14045 YIEGIA protein AS54_RS08805 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AS54_RS08805 PF01926 50S ribosome-binding GTPase AS54_RS08810 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AS54_RS08810 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AS54_RS08820 PF10966 Protein of unknown function (DUF2768) AS54_RS08830 PF09547 Stage IV sporulation protein A (spore_IV_A) AS54_RS08835 PF00216 Bacterial DNA-binding protein AS54_RS08840 PF01227 GTP cyclohydrolase I AS54_RS08845 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 AS54_RS08850 PF01209 ubiE/COQ5 methyltransferase family AS54_RS08855 PF00348 Polyprenyl synthetase AS54_RS08860 PF00334 Nucleoside diphosphate kinase AS54_RS08865 PF01264 Chorismate synthase AS54_RS08870 PF01761 3-dehydroquinate synthase AS54_RS08875 PF00155 Aminotransferase class I and II AS54_RS08885 PF08864 UPF0302 domain AS54_RS08885 PF08858 IDEAL domain AS54_RS08890 PF10673 Protein of unknown function (DUF2487) AS54_RS08895 PF00355 Rieske [2Fe-2S] domain AS54_RS08900 PF00033 Cytochrome b/b6/petB AS54_RS08905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS54_RS08905 PF00032 Cytochrome b(C-terminal)/b6/petD AS54_RS08910 PF07187 Protein of unknown function (DUF1405) AS54_RS08920 PF09577 Sporulation protein YpjB (SpoYpjB) AS54_RS08925 PF04298 Putative neutral zinc metallopeptidase AS54_RS08935 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS54_RS08935 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS08945 PF03819 MazG nucleotide pyrophosphohydrolase domain AS54_RS08950 PF01113 Dihydrodipicolinate reductase, N-terminus AS54_RS08950 PF05173 Dihydrodipicolinate reductase, C-terminus AS54_RS08955 PF02142 MGS-like domain AS54_RS08960 PF02585 GlcNAc-PI de-N-acetylase AS54_RS08965 PF00534 Glycosyl transferases group 1 AS54_RS08965 PF13439 Glycosyltransferase Family 4 AS54_RS08970 PF12627 Probable RNA and SrmB- binding site of polymerase A AS54_RS08970 PF01743 Poly A polymerase head domain AS54_RS08970 PF13735 tRNA nucleotidyltransferase domain 2 putative AS54_RS08975 PF03099 Biotin/lipoate A/B protein ligase family AS54_RS08975 PF02237 Biotin protein ligase C terminal domain AS54_RS08975 PF08279 HTH domain AS54_RS08990 PF02548 Ketopantoate hydroxymethyltransferase AS54_RS08995 PF02569 Pantoate-beta-alanine ligase AS54_RS09000 PF02261 Aspartate decarboxylase AS54_RS09005 PF00929 Exonuclease AS54_RS09005 PF04851 Type III restriction enzyme, res subunit AS54_RS09005 PF13307 Helicase C-terminal domain AS54_RS09010 PF14084 Protein of unknown function (DUF4264) AS54_RS09020 PF00155 Aminotransferase class I and II AS54_RS09025 PF07261 Replication initiation and membrane attachment AS54_RS09030 PF00633 Helix-hairpin-helix motif AS54_RS09030 PF00730 HhH-GPD superfamily base excision DNA repair protein AS54_RS09030 PF10576 Iron-sulfur binding domain of endonuclease III AS54_RS09040 PF00905 Penicillin binding protein transpeptidase domain AS54_RS09040 PF00912 Transglycosylase AS54_RS09045 PF03838 Recombination protein U AS54_RS09050 PF10720 Protein of unknown function (DUF2515) AS54_RS09080 PF06908 YspA SLOG family AS54_RS09085 PF05103 DivIVA protein AS54_RS09090 PF01170 Putative RNA methylase family UPF0020 AS54_RS09090 PF02926 THUMP domain AS54_RS09100 PF13307 Helicase C-terminal domain AS54_RS09105 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AS54_RS09115 PF01636 Phosphotransferase enzyme family AS54_RS09120 PF00557 Metallopeptidase family M24 AS54_RS09125 PF00156 Phosphoribosyl transferase domain AS54_RS09130 PF00860 Permease family AS54_RS09135 PF04235 Protein of unknown function (DUF418) AS54_RS09140 PF00350 Dynamin family AS54_RS09150 PF00583 Acetyltransferase (GNAT) family AS54_RS09155 PF10752 Protein of unknown function (DUF2533) AS54_RS09160 PF00581 Rhodanese-like domain AS54_RS09180 PF03738 Glutathionylspermidine synthase preATP-grasp AS54_RS09190 PF00689 Cation transporting ATPase, C-terminus AS54_RS09190 PF00690 Cation transporter/ATPase, N-terminus AS54_RS09195 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS54_RS09195 PF01367 5'-3' exonuclease, C-terminal SAM fold AS54_RS09210 PF18014 Acetyltransferase (GNAT) domain AS54_RS09210 PF13673 Acetyltransferase (GNAT) domain AS54_RS09230 PF13456 Reverse transcriptase-like AS54_RS09235 PF01263 Aldose 1-epimerase AS54_RS09260 PF00313 'Cold-shock' DNA-binding domain AS54_RS09265 PF08892 YqcI/YcgG family AS54_RS09270 PF01810 LysE type translocator AS54_RS09285 PF04341 Protein of unknown function, DUF485 AS54_RS09290 PF00474 Sodium:solute symporter family AS54_RS09295 PF00202 Aminotransferase class-III AS54_RS09305 PF00999 Sodium/hydrogen exchanger family AS54_RS09310 PF00753 Metallo-beta-lactamase superfamily AS54_RS09310 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AS54_RS09310 PF17770 Ribonuclease J C-terminal domain AS54_RS09315 PF13411 MerR HTH family regulatory protein AS54_RS09315 PF06445 GyrI-like small molecule binding domain AS54_RS09325 PF04239 Protein of unknown function (DUF421) AS54_RS09330 PF02698 DUF218 domain AS54_RS09340 PF00881 Nitroreductase family AS54_RS09385 PF17209 Hfq protein AS54_RS09395 PF01618 MotA/TolQ/ExbB proton channel family AS54_RS09400 PF13677 Membrane MotB of proton-channel complex MotA/MotB AS54_RS09400 PF00691 OmpA family AS54_RS09405 PF00072 Response regulator receiver domain AS54_RS09410 PF02895 Signal transducing histidine kinase, homodimeric domain AS54_RS09410 PF01584 CheW-like domain AS54_RS09410 PF07194 P2 response regulator binding domain AS54_RS09410 PF01627 Hpt domain AS54_RS09410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS09415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AS54_RS09415 PF04509 CheC-like family AS54_RS09430 PF01739 CheR methyltransferase, SAM binding domain AS54_RS09430 PF03705 CheR methyltransferase, all-alpha domain AS54_RS09450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS54_RS09450 PF00460 Flagella basal body rod protein AS54_RS09455 PF00700 Bacterial flagellin C-terminal helical region AS54_RS09455 PF00669 Bacterial flagellin N-terminal helical region AS54_RS09460 PF07196 Flagellin hook IN motif AS54_RS09460 PF07195 Flagellar hook-associated protein 2 C-terminus AS54_RS09460 PF02465 Flagellar hook-associated protein 2 N-terminus AS54_RS09475 PF00460 Flagella basal body rod protein AS54_RS09480 PF00460 Flagella basal body rod protein AS54_RS09480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS54_RS09485 PF02049 Flagellar hook-basal body complex protein FliE AS54_RS09490 PF08345 Flagellar M-ring protein C-terminal AS54_RS09490 PF01514 Secretory protein of YscJ/FliF family AS54_RS09495 PF14842 FliG N-terminal domain AS54_RS09495 PF01706 FliG C-terminal domain AS54_RS09495 PF14841 FliG middle domain AS54_RS09505 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS54_RS09505 PF18269 T3SS EscN ATPase C-terminal domain AS54_RS09505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS54_RS09525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS54_RS09525 PF00460 Flagella basal body rod protein AS54_RS09525 PF07559 Flagellar basal body protein FlaE AS54_RS09540 PF00072 Response regulator receiver domain AS54_RS09540 PF01584 CheW-like domain AS54_RS09550 PF12181 DNA binding domain of the motility gene repressor (MogR) AS54_RS09555 PF00700 Bacterial flagellin C-terminal helical region AS54_RS09555 PF00669 Bacterial flagellin N-terminal helical region AS54_RS09560 PF00700 Bacterial flagellin C-terminal helical region AS54_RS09560 PF00669 Bacterial flagellin N-terminal helical region AS54_RS09565 PF01464 Transglycosylase SLT domain AS54_RS09575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AS54_RS09575 PF02154 Flagellar motor switch protein FliM AS54_RS09580 PF04509 CheC-like family AS54_RS09580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AS54_RS09590 PF00813 FliP family AS54_RS09595 PF01313 Bacterial export proteins, family 3 AS54_RS09605 PF01312 FlhB HrpN YscU SpaS Family AS54_RS09610 PF00771 FHIPEP family AS54_RS09615 PF00448 SRP54-type protein, GTPase domain AS54_RS09620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS54_RS09620 PF00460 Flagella basal body rod protein AS54_RS09625 PF02272 DHHA1 domain AS54_RS09625 PF01411 tRNA synthetases class II (A) AS54_RS09625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS54_RS09650 PF00440 Bacterial regulatory proteins, tetR family AS54_RS09650 PF08360 QacR-like protein, C-terminal region AS54_RS09655 PF17329 Family of unknown function (DUF5367) AS54_RS09670 PF03992 Antibiotic biosynthesis monooxygenase AS54_RS09675 PF08141 Small acid-soluble spore protein H family AS54_RS09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS09695 PF03466 LysR substrate binding domain AS54_RS09700 PF00005 ABC transporter AS54_RS09700 PF08402 TOBE domain AS54_RS09710 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS09715 PF12706 Beta-lactamase superfamily domain AS54_RS09715 PF00753 Metallo-beta-lactamase superfamily AS54_RS09725 PF10787 Uncharacterised protein from bacillus cereus group AS54_RS09740 PF07943 Penicillin-binding protein 5, C-terminal domain AS54_RS09740 PF00768 D-alanyl-D-alanine carboxypeptidase AS54_RS09750 PF00300 Histidine phosphatase superfamily (branch 1) AS54_RS09760 PF00561 alpha/beta hydrolase fold AS54_RS09770 PF01047 MarR family AS54_RS09780 PF00733 Asparagine synthase AS54_RS09780 PF13537 Glutamine amidotransferase domain AS54_RS09800 PF01545 Cation efflux family AS54_RS09800 PF16916 Dimerisation domain of Zinc Transporter AS54_RS09810 PF07729 FCD domain AS54_RS09810 PF00392 Bacterial regulatory proteins, gntR family AS54_RS09815 PF00892 EamA-like transporter family AS54_RS09820 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS54_RS09820 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS54_RS09825 PF03773 Predicted permease AS54_RS09840 PF03553 Na+/H+ antiporter family AS54_RS09845 PF10415 Fumarase C C-terminus AS54_RS09845 PF00206 Lyase AS54_RS09865 PF01554 MatE AS54_RS09870 PF03575 Peptidase family S51 AS54_RS09890 PF02683 Cytochrome C biogenesis protein transmembrane region AS54_RS09895 PF00578 AhpC/TSA family AS54_RS09915 PF00291 Pyridoxal-phosphate dependent enzyme AS54_RS09920 PF04286 Protein of unknown function (DUF445) AS54_RS09945 PF00072 Response regulator receiver domain AS54_RS09945 PF00196 Bacterial regulatory proteins, luxR family AS54_RS09950 PF07730 Histidine kinase AS54_RS09950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS09950 PF13492 GAF domain AS54_RS09950 PF13185 GAF domain AS54_RS09955 PF00005 ABC transporter AS54_RS09970 PF13091 PLD-like domain AS54_RS09975 PF00696 Amino acid kinase family AS54_RS09980 PF00375 Sodium:dicarboxylate symporter family AS54_RS09985 PF00206 Lyase AS54_RS09985 PF10415 Fumarase C C-terminus AS54_RS09990 PF03949 Malic enzyme, NAD binding domain AS54_RS09990 PF00390 Malic enzyme, N-terminal domain AS54_RS09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS10000 PF00072 Response regulator receiver domain AS54_RS10000 PF08664 YcbB domain AS54_RS10005 PF00271 Helicase conserved C-terminal domain AS54_RS10005 PF00176 SNF2 family N-terminal domain AS54_RS10005 PF04434 SWIM zinc finger AS54_RS10025 PF03590 Aspartate-ammonia ligase AS54_RS10045 PF00696 Amino acid kinase family AS54_RS10045 PF13840 ACT domain AS54_RS10060 PF13761 Domain of unknown function (DUF4166) AS54_RS10065 PF14158 YndJ-like protein AS54_RS10070 PF00293 NUDIX domain AS54_RS10075 PF02368 Bacterial Ig-like domain (group 2) AS54_RS10075 PF00395 S-layer homology domain AS54_RS10085 PF07690 Major Facilitator Superfamily AS54_RS10100 PF02554 Carbon starvation protein CstA AS54_RS10105 PF03976 Polyphosphate kinase 2 (PPK2) AS54_RS10110 PF10400 Virulence activator alpha C-term AS54_RS10110 PF03551 Transcriptional regulator PadR-like family AS54_RS10115 PF07690 Major Facilitator Superfamily AS54_RS10120 PF07690 Major Facilitator Superfamily AS54_RS10125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS54_RS10125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS54_RS10130 PF01926 50S ribosome-binding GTPase AS54_RS10130 PF16360 GTP-binding GTPase Middle Region AS54_RS10130 PF13167 GTP-binding GTPase N-terminal AS54_RS10135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS10140 PF07690 Major Facilitator Superfamily AS54_RS10145 PF00291 Pyridoxal-phosphate dependent enzyme AS54_RS10160 PF01943 Polysaccharide biosynthesis protein AS54_RS10160 PF14667 Polysaccharide biosynthesis C-terminal domain AS54_RS10165 PF00209 Sodium:neurotransmitter symporter family AS54_RS10170 PF00457 Glycosyl hydrolases family 11 AS54_RS10170 PF01522 Polysaccharide deacetylase AS54_RS10170 PF03422 Carbohydrate binding module (family 6) AS54_RS10180 PF04239 Protein of unknown function (DUF421) AS54_RS10195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS54_RS10195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS54_RS10210 PF01625 Peptide methionine sulfoxide reductase AS54_RS10220 PF01063 Amino-transferase class IV AS54_RS10225 PF00205 Thiamine pyrophosphate enzyme, central domain AS54_RS10225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS54_RS10225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS54_RS10235 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AS54_RS10235 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AS54_RS10240 PF00920 Dehydratase family AS54_RS10245 PF00585 C-terminal regulatory domain of Threonine dehydratase AS54_RS10245 PF00291 Pyridoxal-phosphate dependent enzyme AS54_RS10255 PF09587 Bacterial capsule synthesis protein PGA_cap AS54_RS10270 PF07690 Major Facilitator Superfamily AS54_RS10275 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AS54_RS10290 PF00144 Beta-lactamase AS54_RS10295 PF04397 LytTr DNA-binding domain AS54_RS10295 PF00072 Response regulator receiver domain AS54_RS10300 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AS54_RS10300 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AS54_RS10315 PF01979 Amidohydrolase family AS54_RS10320 PF14436 Bacterial EndoU nuclease AS54_RS10320 PF04740 LXG domain of WXG superfamily AS54_RS10335 PF14659 Phage integrase, N-terminal SAM-like domain AS54_RS10335 PF00589 Phage integrase family AS54_RS10345 PF01381 Helix-turn-helix AS54_RS10395 PF08299 Bacterial dnaA protein helix-turn-helix AS54_RS10395 PF00308 Bacterial dnaA protein AS54_RS10455 PF00145 C-5 cytosine-specific DNA methylase AS54_RS10460 PF00145 C-5 cytosine-specific DNA methylase AS54_RS10485 PF00589 Phage integrase family AS54_RS10620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS10645 PF13186 Iron-sulfur cluster-binding domain AS54_RS10645 PF04055 Radical SAM superfamily AS54_RS10650 PF13302 Acetyltransferase (GNAT) domain AS54_RS10655 PF00072 Response regulator receiver domain AS54_RS10655 PF00486 Transcriptional regulatory protein, C terminal AS54_RS10660 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS10675 PF01566 Natural resistance-associated macrophage protein AS54_RS10680 PF00581 Rhodanese-like domain AS54_RS10680 PF12368 Rhodanase C-terminal AS54_RS10680 PF17773 UPF0176 acylphosphatase like domain AS54_RS10690 PF08546 Ketopantoate reductase PanE/ApbA C terminal AS54_RS10690 PF02558 Ketopantoate reductase PanE/ApbA AS54_RS10700 PF13520 Amino acid permease AS54_RS10710 PF05791 Bacillus haemolytic enterotoxin (HBL) AS54_RS10715 PF05791 Bacillus haemolytic enterotoxin (HBL) AS54_RS10725 PF04198 Putative sugar-binding domain AS54_RS10730 PF01791 DeoC/LacD family aldolase AS54_RS10735 PF01773 Na+ dependent nucleoside transporter N-terminus AS54_RS10735 PF07662 Na+ dependent nucleoside transporter C-terminus AS54_RS10740 PF00591 Glycosyl transferase family, a/b domain AS54_RS10740 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AS54_RS10740 PF02885 Glycosyl transferase family, helical bundle domain AS54_RS10745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS54_RS10750 PF07301 Protein of unknown function (DUF1453) AS54_RS10755 PF05979 Bacterial protein of unknown function (DUF896) AS54_RS10770 PF00557 Metallopeptidase family M24 AS54_RS10770 PF05195 Aminopeptidase P, N-terminal domain AS54_RS10775 PF07732 Multicopper oxidase AS54_RS10775 PF00394 Multicopper oxidase AS54_RS10775 PF07731 Multicopper oxidase AS54_RS10780 PF01551 Peptidase family M23 AS54_RS10790 PF01131 DNA topoisomerase AS54_RS10790 PF01751 Toprim domain AS54_RS10790 PF13342 C-terminal repeat of topoisomerase AS54_RS10790 PF01396 Topoisomerase DNA binding C4 zinc finger AS54_RS10805 PF02525 Flavodoxin-like fold AS54_RS10810 PF05525 Branched-chain amino acid transport protein AS54_RS10820 PF04234 CopC domain AS54_RS10820 PF05425 Copper resistance protein D AS54_RS10820 PF13115 YtkA-like AS54_RS10825 PF07987 Domain of unkown function (DUF1775) AS54_RS10835 PF00892 EamA-like transporter family AS54_RS10840 PF03466 LysR substrate binding domain AS54_RS10840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS10845 PF02082 Transcriptional regulator AS54_RS10850 PF01323 DSBA-like thioredoxin domain AS54_RS10855 PF00881 Nitroreductase family AS54_RS10865 PF01425 Amidase AS54_RS10870 PF01594 AI-2E family transporter AS54_RS10875 PF00056 lactate/malate dehydrogenase, NAD binding domain AS54_RS10875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS54_RS10880 PF01593 Flavin containing amine oxidoreductase AS54_RS10885 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS54_RS10885 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS54_RS10900 PF00501 AMP-binding enzyme AS54_RS10900 PF13193 AMP-binding enzyme C-terminal domain AS54_RS10905 PF01575 MaoC like domain AS54_RS10910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS54_RS10910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS54_RS10920 PF00005 ABC transporter AS54_RS10920 PF12399 Branched-chain amino acid ATP-binding cassette transporter AS54_RS10925 PF00005 ABC transporter AS54_RS10930 PF02653 Branched-chain amino acid transport system / permease component AS54_RS10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS10940 PF03466 LysR substrate binding domain AS54_RS10960 PF01047 MarR family AS54_RS10970 PF01654 Cytochrome bd terminal oxidase subunit I AS54_RS10975 PF02322 Cytochrome bd terminal oxidase subunit II AS54_RS10980 PF00005 ABC transporter AS54_RS10980 PF00664 ABC transporter transmembrane region AS54_RS10985 PF00005 ABC transporter AS54_RS10985 PF00664 ABC transporter transmembrane region AS54_RS11000 PF02016 LD-carboxypeptidase N-terminal domain AS54_RS11000 PF17676 LD-carboxypeptidase C-terminal domain AS54_RS11005 PF00768 D-alanyl-D-alanine carboxypeptidase AS54_RS11005 PF07943 Penicillin-binding protein 5, C-terminal domain AS54_RS11020 PF00877 NlpC/P60 family AS54_RS11020 PF01476 LysM domain AS54_RS11030 PF00005 ABC transporter AS54_RS11030 PF00664 ABC transporter transmembrane region AS54_RS11035 PF00072 Response regulator receiver domain AS54_RS11035 PF00486 Transcriptional regulatory protein, C terminal AS54_RS11040 PF16736 Single Cache-like AS54_RS11040 PF00989 PAS fold AS54_RS11040 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS11045 PF00106 short chain dehydrogenase AS54_RS11050 PF01596 O-methyltransferase AS54_RS11055 PF04439 Streptomycin adenylyltransferase AS54_RS11060 PF01522 Polysaccharide deacetylase AS54_RS11080 PF03447 Homoserine dehydrogenase, NAD binding domain AS54_RS11080 PF01842 ACT domain AS54_RS11080 PF00742 Homoserine dehydrogenase AS54_RS11085 PF00291 Pyridoxal-phosphate dependent enzyme AS54_RS11090 PF00288 GHMP kinases N terminal domain AS54_RS11090 PF08544 GHMP kinases C terminal AS54_RS11105 PF03816 Cell envelope-related transcriptional attenuator domain AS54_RS11115 PF00072 Response regulator receiver domain AS54_RS11115 PF00486 Transcriptional regulatory protein, C terminal AS54_RS11120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS11120 PF00989 PAS fold AS54_RS11120 PF16736 Single Cache-like AS54_RS11120 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS11125 PF01522 Polysaccharide deacetylase AS54_RS11135 PF02308 MgtC family AS54_RS11140 PF00583 Acetyltransferase (GNAT) family AS54_RS11145 PF06276 Ferric iron reductase FhuF-like transporter AS54_RS11145 PF04183 IucA / IucC family AS54_RS11150 PF06276 Ferric iron reductase FhuF-like transporter AS54_RS11150 PF04183 IucA / IucC family AS54_RS11155 PF00501 AMP-binding enzyme AS54_RS11155 PF13193 AMP-binding enzyme C-terminal domain AS54_RS11170 PF01261 Xylose isomerase-like TIM barrel AS54_RS11175 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS54_RS11180 PF07690 Major Facilitator Superfamily AS54_RS11185 PF01810 LysE type translocator AS54_RS11190 PF00392 Bacterial regulatory proteins, gntR family AS54_RS11190 PF00155 Aminotransferase class I and II AS54_RS11200 PF01734 Patatin-like phospholipase AS54_RS11225 PF00293 NUDIX domain AS54_RS11225 PF13344 Haloacid dehalogenase-like hydrolase AS54_RS11230 PF02540 NAD synthase AS54_RS11295 PF04860 Phage portal protein AS54_RS11325 PF02687 FtsX-like permease family AS54_RS11330 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AS54_RS11330 PF18277 AbrB C-terminal domain AS54_RS11335 PF00082 Subtilase family AS54_RS11340 PF01022 Bacterial regulatory protein, arsR family AS54_RS11345 PF00248 Aldo/keto reductase family AS54_RS11350 PF07690 Major Facilitator Superfamily AS54_RS11370 PF03193 RsgA GTPase AS54_RS11375 PF02743 Cache domain AS54_RS11375 PF00672 HAMP domain AS54_RS11375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS11400 PF00210 Ferritin-like domain AS54_RS11415 PF00296 Luciferase-like monooxygenase AS54_RS11425 PF01593 Flavin containing amine oxidoreductase AS54_RS11430 PF13302 Acetyltransferase (GNAT) domain AS54_RS11435 PF00248 Aldo/keto reductase family AS54_RS11440 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS54_RS11440 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS54_RS11445 PF00583 Acetyltransferase (GNAT) family AS54_RS11460 PF14436 Bacterial EndoU nuclease AS54_RS11460 PF04740 LXG domain of WXG superfamily AS54_RS11465 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AS54_RS11465 PF01297 Zinc-uptake complex component A periplasmic AS54_RS11475 PF13460 NAD(P)H-binding AS54_RS11480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS54_RS11485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS54_RS11485 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS54_RS11495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS11500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS11510 PF00300 Histidine phosphatase superfamily (branch 1) AS54_RS11520 PF08757 CotH kinase protein AS54_RS11525 PF00293 NUDIX domain AS54_RS11530 PF09335 SNARE associated Golgi protein AS54_RS11535 PF14667 Polysaccharide biosynthesis C-terminal domain AS54_RS11535 PF01943 Polysaccharide biosynthesis protein AS54_RS11545 PF03773 Predicted permease AS54_RS11550 PF09323 Domain of unknown function (DUF1980) AS54_RS11555 PF03061 Thioesterase superfamily AS54_RS11560 PF13396 Phospholipase_D-nuclease N-terminal AS54_RS11560 PF13091 PLD-like domain AS54_RS11575 PF13460 NAD(P)H-binding AS54_RS11580 PF04306 Protein of unknown function (DUF456) AS54_RS11585 PF01595 Cyclin M transmembrane N-terminal domain AS54_RS11585 PF03471 Transporter associated domain AS54_RS11585 PF00571 CBS domain AS54_RS11600 PF05525 Branched-chain amino acid transport protein AS54_RS11605 PF01588 Putative tRNA binding domain AS54_RS11625 PF07454 Stage II sporulation protein P (SpoIIP) AS54_RS11635 PF02557 D-alanyl-D-alanine carboxypeptidase AS54_RS11645 PF01425 Amidase AS54_RS11650 PF07690 Major Facilitator Superfamily AS54_RS11660 PF01145 SPFH domain / Band 7 family AS54_RS11665 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AS54_RS11665 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AS54_RS11675 PF06574 FAD synthetase AS54_RS11680 PF06052 3-hydroxyanthranilic acid dioxygenase AS54_RS11690 PF01042 Endoribonuclease L-PSP AS54_RS11695 PF00171 Aldehyde dehydrogenase family AS54_RS11700 PF01557 Fumarylacetoacetate (FAA) hydrolase family AS54_RS11705 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AS54_RS11705 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS54_RS11710 PF07836 DmpG-like communication domain AS54_RS11710 PF00682 HMGL-like AS54_RS11720 PF01361 Tautomerase enzyme AS54_RS11725 PF00300 Histidine phosphatase superfamily (branch 1) AS54_RS11740 PF00842 Alanine racemase, C-terminal domain AS54_RS11740 PF01168 Alanine racemase, N-terminal domain AS54_RS11745 PF13847 Methyltransferase domain AS54_RS11760 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS54_RS11765 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS11765 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS54_RS11770 PF00155 Aminotransferase class I and II AS54_RS11770 PF00392 Bacterial regulatory proteins, gntR family AS54_RS11800 PF00583 Acetyltransferase (GNAT) family AS54_RS11875 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AS54_RS11900 PF01209 ubiE/COQ5 methyltransferase family AS54_RS11905 PF01268 Formate--tetrahydrofolate ligase AS54_RS11915 PF00270 DEAD/DEAH box helicase AS54_RS11915 PF00271 Helicase conserved C-terminal domain AS54_RS11920 PF01261 Xylose isomerase-like TIM barrel AS54_RS11925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS11935 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS11935 PF00107 Zinc-binding dehydrogenase AS54_RS11940 PF08281 Sigma-70, region 4 AS54_RS11940 PF04542 Sigma-70 region 2 AS54_RS11955 PF00258 Flavodoxin AS54_RS11955 PF01613 Flavin reductase like domain AS54_RS11965 PF00255 Glutathione peroxidase AS54_RS11970 PF11992 Domain of unknown function (DUF3488) AS54_RS11970 PF13559 Domain of unknown function (DUF4129) AS54_RS11970 PF01841 Transglutaminase-like superfamily AS54_RS11975 PF01882 Protein of unknown function DUF58 AS54_RS11980 PF07726 ATPase family associated with various cellular activities (AAA) AS54_RS11980 PF17863 AAA lid domain AS54_RS11995 PF01568 Molydopterin dinucleotide binding domain AS54_RS11995 PF14710 Respiratory nitrate reductase alpha N-terminal AS54_RS11995 PF00384 Molybdopterin oxidoreductase AS54_RS12000 PF14711 Respiratory nitrate reductase beta C-terminal AS54_RS12000 PF13247 4Fe-4S dicluster domain AS54_RS12005 PF02613 Nitrate reductase delta subunit AS54_RS12010 PF02665 Nitrate reductase gamma subunit AS54_RS12015 PF00325 Bacterial regulatory proteins, crp family AS54_RS12015 PF00027 Cyclic nucleotide-binding domain AS54_RS12020 PF06463 Molybdenum Cofactor Synthesis C AS54_RS12020 PF04055 Radical SAM superfamily AS54_RS12025 PF00899 ThiF family AS54_RS12030 PF03453 MoeA N-terminal region (domain I and II) AS54_RS12030 PF03454 MoeA C-terminal region (domain IV) AS54_RS12030 PF00994 Probable molybdopterin binding domain AS54_RS12035 PF02391 MoaE protein AS54_RS12045 PF07690 Major Facilitator Superfamily AS54_RS12060 PF01903 CbiX AS54_RS12065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS54_RS12070 PF00355 Rieske [2Fe-2S] domain AS54_RS12075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS54_RS12075 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS12075 PF04324 BFD-like [2Fe-2S] binding domain AS54_RS12075 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS54_RS12075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS54_RS12080 PF01814 Hemerythrin HHE cation binding domain AS54_RS12080 PF04405 Domain of Unknown function (DUF542) AS54_RS12115 PF04232 Stage V sporulation protein S (SpoVS) AS54_RS12165 PF18593 CdiI immunity protein AS54_RS12180 PF01966 HD domain AS54_RS12185 PF00005 ABC transporter AS54_RS12185 PF16326 ABC transporter C-terminal domain AS54_RS12185 PF12848 ABC transporter AS54_RS12200 PF00436 Single-strand binding protein family AS54_RS12210 PF01494 FAD binding domain AS54_RS12215 PF13769 Virulence factor AS54_RS12215 PF08712 Scaffold protein Nfu/NifU N terminal AS54_RS12225 PF06491 Disulphide isomerase AS54_RS12230 PF04445 Putative SAM-dependent methyltransferase AS54_RS12235 PF03485 Arginyl tRNA synthetase N terminal domain AS54_RS12235 PF00750 tRNA synthetases class I (R) AS54_RS12235 PF05746 DALR anticodon binding domain AS54_RS12255 PF08264 Anticodon-binding domain of tRNA AS54_RS12255 PF00133 tRNA synthetases class I (I, L, M and V) AS54_RS12270 PF08245 Mur ligase middle domain AS54_RS12270 PF01225 Mur ligase family, catalytic domain AS54_RS12270 PF02875 Mur ligase family, glutamate ligase domain AS54_RS12275 PF00152 tRNA synthetases class II (D, K and N) AS54_RS12275 PF01336 OB-fold nucleic acid binding domain AS54_RS12295 PF01580 FtsK/SpoIIIE family AS54_RS12295 PF12538 DNA transporter AS54_RS12395 PF02595 Glycerate kinase family AS54_RS12400 PF00939 Sodium:sulfate symporter transmembrane region AS54_RS12405 PF00072 Response regulator receiver domain AS54_RS12405 PF00486 Transcriptional regulatory protein, C terminal AS54_RS12410 PF00672 HAMP domain AS54_RS12410 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS12410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS12425 PF00209 Sodium:neurotransmitter symporter family AS54_RS12440 PF10997 Alternate to MurJ AS54_RS12445 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS12455 PF00465 Iron-containing alcohol dehydrogenase AS54_RS12460 PF01177 Asp/Glu/Hydantoin racemase AS54_RS12465 PF01980 tRNA-methyltransferase O AS54_RS12470 PF00583 Acetyltransferase (GNAT) family AS54_RS12485 PF00005 ABC transporter AS54_RS12490 PF05975 Bacterial ABC transporter protein EcsB AS54_RS12495 PF14005 YpjP-like protein AS54_RS12500 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS12520 PF07930 D-aminopeptidase, domain B AS54_RS12520 PF00144 Beta-lactamase AS54_RS12525 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain AS54_RS12525 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain AS54_RS12525 PF08531 Alpha-L-rhamnosidase N-terminal domain AS54_RS12525 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain AS54_RS12530 PF00303 Thymidylate synthase AS54_RS12535 PF00186 Dihydrofolate reductase AS54_RS12540 PF05223 NTF2-like N-terminal transpeptidase domain AS54_RS12540 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS12540 PF00905 Penicillin binding protein transpeptidase domain AS54_RS12545 PF02525 Flavodoxin-like fold AS54_RS12550 PF01553 Acyltransferase AS54_RS12555 PF03006 Haemolysin-III related AS54_RS12560 PF02416 mttA/Hcf106 family AS54_RS12565 PF00902 Sec-independent protein translocase protein (TatC) AS54_RS12575 PF02645 Uncharacterised protein, DegV family COG1307 AS54_RS12585 PF02630 SCO1/SenC AS54_RS12590 PF00011 Hsp20/alpha crystallin family AS54_RS12595 PF13537 Glutamine amidotransferase domain AS54_RS12595 PF00733 Asparagine synthase AS54_RS12615 PF01497 Periplasmic binding protein AS54_RS12620 PF01063 Amino-transferase class IV AS54_RS12625 PF00881 Nitroreductase family AS54_RS12640 PF00857 Isochorismatase family AS54_RS12645 PF00293 NUDIX domain AS54_RS12650 PF00011 Hsp20/alpha crystallin family AS54_RS12655 PF00924 Mechanosensitive ion channel AS54_RS12660 PF07730 Histidine kinase AS54_RS12660 PF13185 GAF domain AS54_RS12665 PF00196 Bacterial regulatory proteins, luxR family AS54_RS12665 PF00072 Response regulator receiver domain AS54_RS12670 PF01380 SIS domain AS54_RS12670 PF01418 Helix-turn-helix domain, rpiR family AS54_RS12675 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS12675 PF00107 Zinc-binding dehydrogenase AS54_RS12690 PF00144 Beta-lactamase AS54_RS12700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS54_RS12700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS54_RS12715 PF03358 NADPH-dependent FMN reductase AS54_RS12730 PF00005 ABC transporter AS54_RS12730 PF00571 CBS domain AS54_RS12735 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS12740 PF13520 Amino acid permease AS54_RS12770 PF00571 CBS domain AS54_RS12770 PF01595 Cyclin M transmembrane N-terminal domain AS54_RS12770 PF03471 Transporter associated domain AS54_RS12775 PF00171 Aldehyde dehydrogenase family AS54_RS12780 PF07997 Protein of unknown function (DUF1694) AS54_RS12785 PF09385 Histidine kinase N terminal AS54_RS12795 PF00202 Aminotransferase class-III AS54_RS12800 PF01144 Coenzyme A transferase AS54_RS12805 PF01144 Coenzyme A transferase AS54_RS12810 PF01546 Peptidase family M20/M25/M40 AS54_RS12810 PF07687 Peptidase dimerisation domain AS54_RS12815 PF00583 Acetyltransferase (GNAT) family AS54_RS12820 PF00158 Sigma-54 interaction domain AS54_RS12820 PF13426 PAS domain AS54_RS12820 PF02954 Bacterial regulatory protein, Fis family AS54_RS12825 PF12544 Lysine-2,3-aminomutase AS54_RS12830 PF14122 YokU-like protein, putative antitoxin AS54_RS12835 PF06855 YozE SAM-like fold AS54_RS12850 PF14162 YozD-like protein AS54_RS12860 PF08239 Bacterial SH3 domain AS54_RS12860 PF00069 Protein kinase domain AS54_RS12865 PF07070 SpoOM protein AS54_RS12870 PF01569 PAP2 superfamily AS54_RS12875 PF01545 Cation efflux family AS54_RS12875 PF16916 Dimerisation domain of Zinc Transporter AS54_RS12880 PF00085 Thioredoxin AS54_RS12960 PF10676 Spore germination protein gerPA/gerPF AS54_RS12975 PF00106 short chain dehydrogenase AS54_RS12995 PF00912 Transglycosylase AS54_RS12995 PF00905 Penicillin binding protein transpeptidase domain AS54_RS13005 PF01521 Iron-sulphur cluster biosynthesis AS54_RS13010 PF00285 Citrate synthase, C-terminal domain AS54_RS13015 PF03972 MmgE/PrpD family AS54_RS13025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS54_RS13025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS54_RS13025 PF02770 Acyl-CoA dehydrogenase, middle domain AS54_RS13030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS54_RS13030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS54_RS13035 PF00171 Aldehyde dehydrogenase family AS54_RS13040 PF01810 LysE type translocator AS54_RS13045 PF00378 Enoyl-CoA hydratase/isomerase AS54_RS13055 PF10763 Protein of unknown function (DUF2584) AS54_RS13060 PF12320 Type 5 capsule protein repressor C-terminal domain AS54_RS13060 PF00149 Calcineurin-like phosphoesterase AS54_RS13065 PF13476 AAA domain AS54_RS13075 PF01022 Bacterial regulatory protein, arsR family AS54_RS13090 PF07690 Major Facilitator Superfamily AS54_RS13095 PF00106 short chain dehydrogenase AS54_RS13100 PF00425 chorismate binding enzyme AS54_RS13105 PF13193 AMP-binding enzyme C-terminal domain AS54_RS13105 PF00501 AMP-binding enzyme AS54_RS13110 PF00550 Phosphopantetheine attachment site AS54_RS13110 PF00857 Isochorismatase family AS54_RS13115 PF00668 Condensation domain AS54_RS13115 PF13193 AMP-binding enzyme C-terminal domain AS54_RS13115 PF00501 AMP-binding enzyme AS54_RS13115 PF00975 Thioesterase domain AS54_RS13115 PF00550 Phosphopantetheine attachment site AS54_RS13120 PF03621 MbtH-like protein AS54_RS13125 PF07690 Major Facilitator Superfamily AS54_RS13140 PF00216 Bacterial DNA-binding protein AS54_RS13150 PF05163 DinB family AS54_RS13155 PF00082 Subtilase family AS54_RS13160 PF01235 Sodium:alanine symporter family AS54_RS13180 PF16291 Domain of unknown function (DUF4937 AS54_RS13185 PF01479 S4 domain AS54_RS13185 PF00849 RNA pseudouridylate synthase AS54_RS13190 PF03129 Anticodon binding domain AS54_RS13190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS54_RS13190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS54_RS13190 PF02824 TGS domain AS54_RS13200 PF00005 ABC transporter AS54_RS13210 PF12146 Serine aminopeptidase, S33 AS54_RS13215 PF07690 Major Facilitator Superfamily AS54_RS13235 PF13649 Methyltransferase domain AS54_RS13280 PF00753 Metallo-beta-lactamase superfamily AS54_RS13280 PF16123 Hydroxyacylglutathione hydrolase C-terminus AS54_RS13290 PF03176 MMPL family AS54_RS13300 PF00302 Chloramphenicol acetyltransferase AS54_RS13315 PF00583 Acetyltransferase (GNAT) family AS54_RS13345 PF01593 Flavin containing amine oxidoreductase AS54_RS13355 PF08241 Methyltransferase domain AS54_RS13360 PF13302 Acetyltransferase (GNAT) domain AS54_RS13370 PF00313 'Cold-shock' DNA-binding domain AS54_RS13395 PF03466 LysR substrate binding domain AS54_RS13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS13400 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS54_RS13400 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS54_RS13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS13415 PF03466 LysR substrate binding domain AS54_RS13420 PF03475 3-alpha domain AS54_RS13420 PF03473 MOSC domain AS54_RS13435 PF00005 ABC transporter AS54_RS13435 PF00664 ABC transporter transmembrane region AS54_RS13440 PF00664 ABC transporter transmembrane region AS54_RS13440 PF00005 ABC transporter AS54_RS13455 PF01810 LysE type translocator AS54_RS13460 PF01381 Helix-turn-helix AS54_RS13460 PF07883 Cupin domain AS54_RS13490 PF04607 Region found in RelA / SpoT proteins AS54_RS13490 PF02824 TGS domain AS54_RS13490 PF13291 ACT domain AS54_RS13500 PF00890 FAD binding domain AS54_RS13505 PF08281 Sigma-70, region 4 AS54_RS13505 PF12680 SnoaL-like domain AS54_RS13505 PF04542 Sigma-70 region 2 AS54_RS13530 PF02638 Glycosyl hydrolase-like 10 AS54_RS13540 PF02378 Phosphotransferase system, EIIC AS54_RS13550 PF03702 Anhydro-N-acetylmuramic acid kinase AS54_RS13555 PF01869 BadF/BadG/BcrA/BcrD ATPase family AS54_RS13560 PF02660 Glycerol-3-phosphate acyltransferase AS54_RS13565 PF00266 Aminotransferase class-V AS54_RS13570 PF00291 Pyridoxal-phosphate dependent enzyme AS54_RS13605 PF16123 Hydroxyacylglutathione hydrolase C-terminus AS54_RS13605 PF00753 Metallo-beta-lactamase superfamily AS54_RS13620 PF00270 DEAD/DEAH box helicase AS54_RS13620 PF00271 Helicase conserved C-terminal domain AS54_RS13635 PF00440 Bacterial regulatory proteins, tetR family AS54_RS13635 PF17932 Tetracyclin repressor-like, C-terminal domain AS54_RS13650 PF02687 FtsX-like permease family AS54_RS13650 PF00005 ABC transporter AS54_RS13650 PF12704 MacB-like periplasmic core domain AS54_RS13655 PF03848 Tellurite resistance protein TehB AS54_RS13655 PF09313 Domain of unknown function (DUF1971) AS54_RS13670 PF14659 Phage integrase, N-terminal SAM-like domain AS54_RS13670 PF00589 Phage integrase family AS54_RS13750 PF12802 MarR family AS54_RS13755 PF00300 Histidine phosphatase superfamily (branch 1) AS54_RS13760 PF14171 Toxin SpoIISA, type II toxin-antitoxin system AS54_RS13790 PF01546 Peptidase family M20/M25/M40 AS54_RS13790 PF07687 Peptidase dimerisation domain AS54_RS13800 PF00132 Bacterial transferase hexapeptide (six repeats) AS54_RS13815 PF05223 NTF2-like N-terminal transpeptidase domain AS54_RS13815 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS13815 PF00905 Penicillin binding protein transpeptidase domain AS54_RS13820 PF04542 Sigma-70 region 2 AS54_RS13820 PF08281 Sigma-70, region 4 AS54_RS13830 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS13830 PF00905 Penicillin binding protein transpeptidase domain AS54_RS13835 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS13835 PF00905 Penicillin binding protein transpeptidase domain AS54_RS13850 PF00356 Bacterial regulatory proteins, lacI family AS54_RS13855 PF07690 Major Facilitator Superfamily AS54_RS13860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS54_RS13860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS54_RS13865 PF00294 pfkB family carbohydrate kinase AS54_RS13870 PF00171 Aldehyde dehydrogenase family AS54_RS13875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS54_RS13875 PF00205 Thiamine pyrophosphate enzyme, central domain AS54_RS13875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS54_RS13880 PF01261 Xylose isomerase-like TIM barrel AS54_RS13885 PF01116 Fructose-bisphosphate aldolase class-II AS54_RS13890 PF04962 KduI/IolB family AS54_RS13910 PF00149 Calcineurin-like phosphoesterase AS54_RS13910 PF02872 5'-nucleotidase, C-terminal domain AS54_RS13920 PF18801 response regulator aspartate phosphatase H, N terminal AS54_RS13925 PF01381 Helix-turn-helix AS54_RS13940 PF02557 D-alanyl-D-alanine carboxypeptidase AS54_RS13950 PF01520 N-acetylmuramoyl-L-alanine amidase AS54_RS13950 PF00395 S-layer homology domain AS54_RS13955 PF07968 Leukocidin/Hemolysin toxin family AS54_RS13960 PF00440 Bacterial regulatory proteins, tetR family AS54_RS13965 PF16326 ABC transporter C-terminal domain AS54_RS13965 PF00005 ABC transporter AS54_RS13970 PF03707 Bacterial signalling protein N terminal repeat AS54_RS13970 PF00563 EAL domain AS54_RS13970 PF00990 Diguanylate cyclase, GGDEF domain AS54_RS13975 PF13302 Acetyltransferase (GNAT) domain AS54_RS13980 PF00672 HAMP domain AS54_RS13980 PF02743 Cache domain AS54_RS13980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS13995 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS14000 PF00581 Rhodanese-like domain AS54_RS14025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS54_RS14025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS54_RS14025 PF02770 Acyl-CoA dehydrogenase, middle domain AS54_RS14030 PF00289 Biotin carboxylase, N-terminal domain AS54_RS14030 PF02785 Biotin carboxylase C-terminal domain AS54_RS14030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS54_RS14035 PF00364 Biotin-requiring enzyme AS54_RS14040 PF00682 HMGL-like AS54_RS14045 PF00378 Enoyl-CoA hydratase/isomerase AS54_RS14050 PF01039 Carboxyl transferase domain AS54_RS14055 PF00501 AMP-binding enzyme AS54_RS14055 PF16177 Acetyl-coenzyme A synthetase N-terminus AS54_RS14055 PF13193 AMP-binding enzyme C-terminal domain AS54_RS14070 PF00485 Phosphoribulokinase / Uridine kinase family AS54_RS14080 PF05163 DinB family AS54_RS14085 PF00768 D-alanyl-D-alanine carboxypeptidase AS54_RS14085 PF07943 Penicillin-binding protein 5, C-terminal domain AS54_RS14090 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS14090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS14095 PF00072 Response regulator receiver domain AS54_RS14095 PF00486 Transcriptional regulatory protein, C terminal AS54_RS14110 PF01048 Phosphorylase superfamily AS54_RS14130 PF07504 Fungalysin/Thermolysin Propeptide Motif AS54_RS14130 PF03413 Peptidase propeptide and YPEB domain AS54_RS14130 PF01447 Thermolysin metallopeptidase, catalytic domain AS54_RS14130 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS54_RS14150 PF17760 UvrA interaction domain AS54_RS14150 PF17755 UvrA DNA-binding domain AS54_RS14150 PF17760 UvrA interaction domain AS54_RS14150 PF17755 UvrA DNA-binding domain AS54_RS14170 PF09278 MerR, DNA binding AS54_RS14170 PF00376 MerR family regulatory protein AS54_RS14175 PF07690 Major Facilitator Superfamily AS54_RS14185 PF13847 Methyltransferase domain AS54_RS14220 PF00392 Bacterial regulatory proteins, gntR family AS54_RS14220 PF00155 Aminotransferase class I and II AS54_RS14250 PF08241 Methyltransferase domain AS54_RS14260 PF08450 SMP-30/Gluconolactonase/LRE-like region AS54_RS14270 PF01921 tRNA synthetases class I (K) AS54_RS14275 PF07486 Cell Wall Hydrolase AS54_RS14285 PF00486 Transcriptional regulatory protein, C terminal AS54_RS14285 PF00072 Response regulator receiver domain AS54_RS14290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS14300 PF12848 ABC transporter AS54_RS14300 PF00005 ABC transporter AS54_RS14315 PF00005 ABC transporter AS54_RS14320 PF02687 FtsX-like permease family AS54_RS14340 PF03447 Homoserine dehydrogenase, NAD binding domain AS54_RS14340 PF01842 ACT domain AS54_RS14340 PF00742 Homoserine dehydrogenase AS54_RS14345 PF00392 Bacterial regulatory proteins, gntR family AS54_RS14345 PF00155 Aminotransferase class I and II AS54_RS14350 PF01820 D-ala D-ala ligase N-terminus AS54_RS14350 PF07478 D-ala D-ala ligase C-terminus AS54_RS14355 PF03070 TENA/THI-4/PQQC family AS54_RS14440 PF00067 Cytochrome P450 AS54_RS14450 PF00132 Bacterial transferase hexapeptide (six repeats) AS54_RS14455 PF07561 Domain of Unknown Function (DUF1540) AS54_RS14465 PF00067 Cytochrome P450 AS54_RS14480 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS14480 PF13426 PAS domain AS54_RS14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS14480 PF00989 PAS fold AS54_RS14480 PF13188 PAS domain AS54_RS14485 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS14485 PF00905 Penicillin binding protein transpeptidase domain AS54_RS14490 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS54_RS14495 PF01177 Asp/Glu/Hydantoin racemase AS54_RS14500 PF07155 ECF-type riboflavin transporter, S component AS54_RS14505 PF12558 ATP-binding cassette cobalt transporter AS54_RS14505 PF00005 ABC transporter AS54_RS14515 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS14515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS14525 PF04229 GrpB protein AS54_RS14530 PF00107 Zinc-binding dehydrogenase AS54_RS14530 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS14535 PF01569 PAP2 superfamily AS54_RS14540 PF00905 Penicillin binding protein transpeptidase domain AS54_RS14540 PF03793 PASTA domain AS54_RS14540 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS14545 PF08361 MAATS-type transcriptional repressor, C-terminal region AS54_RS14545 PF00440 Bacterial regulatory proteins, tetR family AS54_RS14560 PF11954 Domain of unknown function (DUF3471) AS54_RS14560 PF00144 Beta-lactamase AS54_RS14595 PF01965 DJ-1/PfpI family AS54_RS14600 PF00144 Beta-lactamase AS54_RS14615 PF07690 Major Facilitator Superfamily AS54_RS14630 PF03009 Glycerophosphoryl diester phosphodiesterase family AS54_RS14645 PF00155 Aminotransferase class I and II AS54_RS14645 PF00392 Bacterial regulatory proteins, gntR family AS54_RS14650 PF00892 EamA-like transporter family AS54_RS14675 PF00144 Beta-lactamase AS54_RS14685 PF07690 Major Facilitator Superfamily AS54_RS14690 PF09297 NADH pyrophosphatase zinc ribbon domain AS54_RS14690 PF00293 NUDIX domain AS54_RS14695 PF02768 DNA polymerase III beta subunit, C-terminal domain AS54_RS14695 PF02767 DNA polymerase III beta subunit, central domain AS54_RS14695 PF00712 DNA polymerase III beta subunit, N-terminal domain AS54_RS14700 PF00293 NUDIX domain AS54_RS14725 PF00300 Histidine phosphatase superfamily (branch 1) AS54_RS14735 PF09234 Domain of unknown function (DUF1963) AS54_RS14760 PF01734 Patatin-like phospholipase AS54_RS14765 PF08000 Bacterial PH domain AS54_RS14775 PF12867 DinB superfamily AS54_RS14790 PF02673 Bacitracin resistance protein BacA AS54_RS14800 PF01541 GIY-YIG catalytic domain AS54_RS14835 PF01266 FAD dependent oxidoreductase AS54_RS14855 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS14870 PF01569 PAP2 superfamily AS54_RS14875 PF03714 Bacterial pullanase-associated domain AS54_RS14875 PF00128 Alpha amylase, catalytic domain AS54_RS14875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AS54_RS14880 PF07504 Fungalysin/Thermolysin Propeptide Motif AS54_RS14880 PF01447 Thermolysin metallopeptidase, catalytic domain AS54_RS14880 PF03413 Peptidase propeptide and YPEB domain AS54_RS14880 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS54_RS14900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS14905 PF00344 SecY translocase AS54_RS14910 PF11638 DnaA N-terminal domain AS54_RS14910 PF08299 Bacterial dnaA protein helix-turn-helix AS54_RS14910 PF00308 Bacterial dnaA protein AS54_RS14915 PF00892 EamA-like transporter family AS54_RS14920 PF00155 Aminotransferase class I and II AS54_RS14920 PF00392 Bacterial regulatory proteins, gntR family AS54_RS14925 PF00561 alpha/beta hydrolase fold AS54_RS14950 PF06081 Aromatic acid exporter family member 1 AS54_RS14965 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AS54_RS14970 PF14620 YpeB sporulation AS54_RS14970 PF03413 Peptidase propeptide and YPEB domain AS54_RS14975 PF01471 Putative peptidoglycan binding domain AS54_RS14975 PF07486 Cell Wall Hydrolase AS54_RS14990 PF03301 Tryptophan 2,3-dioxygenase AS54_RS14995 PF04199 Putative cyclase AS54_RS15000 PF00266 Aminotransferase class-V AS54_RS15005 PF08359 YsiA-like protein, C-terminal region AS54_RS15005 PF00440 Bacterial regulatory proteins, tetR family AS54_RS15010 PF13344 Haloacid dehalogenase-like hydrolase AS54_RS15010 PF00293 NUDIX domain AS54_RS15030 PF00158 Sigma-54 interaction domain AS54_RS15030 PF02954 Bacterial regulatory protein, Fis family AS54_RS15030 PF01590 GAF domain AS54_RS15050 PF00455 DeoR C terminal sensor domain AS54_RS15050 PF08220 DeoR-like helix-turn-helix domain AS54_RS15065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS54_RS15065 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS15065 PF00403 Heavy-metal-associated domain AS54_RS15070 PF02082 Transcriptional regulator AS54_RS15085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS15085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS54_RS15090 PF00364 Biotin-requiring enzyme AS54_RS15090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS54_RS15090 PF02817 e3 binding domain AS54_RS15095 PF02780 Transketolase, C-terminal domain AS54_RS15095 PF02779 Transketolase, pyrimidine binding domain AS54_RS15100 PF00676 Dehydrogenase E1 component AS54_RS15110 PF00106 short chain dehydrogenase AS54_RS15115 PF13673 Acetyltransferase (GNAT) domain AS54_RS15115 PF04229 GrpB protein AS54_RS15120 PF00485 Phosphoribulokinase / Uridine kinase family AS54_RS15130 PF00293 NUDIX domain AS54_RS15155 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS15160 PF00005 ABC transporter AS54_RS15160 PF00571 CBS domain AS54_RS15165 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AS54_RS15170 PF00574 Clp protease AS54_RS15185 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AS54_RS15190 PF13673 Acetyltransferase (GNAT) domain AS54_RS15195 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AS54_RS15195 PF18416 N-acetylglucosamine binding protein domain 2 AS54_RS15200 PF01202 Shikimate kinase AS54_RS15205 PF10990 Protein of unknown function (DUF2809) AS54_RS15210 PF08241 Methyltransferase domain AS54_RS15215 PF04237 YjbR AS54_RS15220 PF13673 Acetyltransferase (GNAT) domain AS54_RS15225 PF00753 Metallo-beta-lactamase superfamily AS54_RS15225 PF13567 Domain of unknown function (DUF4131) AS54_RS15225 PF03772 Competence protein AS54_RS15275 PF13538 UvrD-like helicase C-terminal domain AS54_RS15290 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AS54_RS15295 PF16124 RecQ zinc-binding AS54_RS15295 PF00271 Helicase conserved C-terminal domain AS54_RS15295 PF00270 DEAD/DEAH box helicase AS54_RS15295 PF00570 HRDC domain AS54_RS15295 PF09382 RQC domain AS54_RS15340 PF02833 DHHA2 domain AS54_RS15340 PF01368 DHH family AS54_RS15345 PF18416 N-acetylglucosamine binding protein domain 2 AS54_RS15345 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AS54_RS15355 PF02627 Carboxymuconolactone decarboxylase family AS54_RS15360 PF01235 Sodium:alanine symporter family AS54_RS15365 PF00171 Aldehyde dehydrogenase family AS54_RS15370 PF00701 Dihydrodipicolinate synthetase family AS54_RS15375 PF05544 Proline racemase AS54_RS15380 PF05544 Proline racemase AS54_RS15385 PF01266 FAD dependent oxidoreductase AS54_RS15390 PF02954 Bacterial regulatory protein, Fis family AS54_RS15390 PF00158 Sigma-54 interaction domain AS54_RS15390 PF13188 PAS domain AS54_RS15395 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS15395 PF04324 BFD-like [2Fe-2S] binding domain AS54_RS15405 PF04324 BFD-like [2Fe-2S] binding domain AS54_RS15405 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS15420 PF08876 Domain of unknown function (DUF1836) AS54_RS15425 PF09335 SNARE associated Golgi protein AS54_RS15440 PF04914 DltD protein AS54_RS15445 PF13673 Acetyltransferase (GNAT) domain AS54_RS15445 PF00958 GMP synthase C terminal domain AS54_RS15445 PF03352 Methyladenine glycosylase AS54_RS15445 PF00117 Glutamine amidotransferase class-I AS54_RS15445 PF13302 Acetyltransferase (GNAT) domain AS54_RS15450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS15455 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain AS54_RS15455 PF00877 NlpC/P60 family AS54_RS15460 PF13378 Enolase C-terminal domain-like AS54_RS15460 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AS54_RS15475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS54_RS15500 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AS54_RS15500 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AS54_RS15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS15505 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS15505 PF00989 PAS fold AS54_RS15505 PF16736 Single Cache-like AS54_RS15510 PF00072 Response regulator receiver domain AS54_RS15510 PF00486 Transcriptional regulatory protein, C terminal AS54_RS15530 PF01048 Phosphorylase superfamily AS54_RS15535 PF03808 Glycosyl transferase WecB/TagA/CpsF family AS54_RS15540 PF08439 Oligopeptidase F AS54_RS15540 PF01432 Peptidase family M3 AS54_RS15545 PF13520 Amino acid permease AS54_RS15550 PF01037 Lrp/AsnC ligand binding domain AS54_RS15555 PF02645 Uncharacterised protein, DegV family COG1307 AS54_RS15560 PF07552 Spore Coat Protein X and V domain AS54_RS15590 PF07690 Major Facilitator Superfamily AS54_RS15600 PF04519 Polymer-forming cytoskeletal AS54_RS15605 PF13171 Protein of unknown function (DUF4004) AS54_RS15610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS15610 PF12793 Sugar transport-related sRNA regulator N-term AS54_RS15615 PF07690 Major Facilitator Superfamily AS54_RS15635 PF04226 Transglycosylase associated protein AS54_RS15640 PF01156 Inosine-uridine preferring nucleoside hydrolase AS54_RS15650 PF08241 Methyltransferase domain AS54_RS15680 PF00155 Aminotransferase class I and II AS54_RS15685 PF07977 FabA-like domain AS54_RS15690 PF03630 Fumble AS54_RS15710 PF00005 ABC transporter AS54_RS15760 PF01594 AI-2E family transporter AS54_RS15775 PF00296 Luciferase-like monooxygenase AS54_RS15780 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS15785 PF09084 NMT1/THI5 like AS54_RS15790 PF00005 ABC transporter AS54_RS15800 PF09297 NADH pyrophosphatase zinc ribbon domain AS54_RS15800 PF00293 NUDIX domain AS54_RS15820 PF02522 Aminoglycoside 3-N-acetyltransferase AS54_RS15845 PF13536 Putative multidrug resistance efflux transporter AS54_RS15850 PF12867 DinB superfamily AS54_RS15880 PF01522 Polysaccharide deacetylase AS54_RS15890 PF03741 Integral membrane protein TerC family AS54_RS15895 PF00884 Sulfatase AS54_RS15900 PF00005 ABC transporter AS54_RS15900 PF12848 ABC transporter AS54_RS15910 PF03176 MMPL family AS54_RS15915 PF00440 Bacterial regulatory proteins, tetR family AS54_RS15915 PF16295 Tetracyclin repressor-like, C-terminal domain AS54_RS15925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS54_RS15930 PF02153 Prephenate dehydrogenase AS54_RS15930 PF01842 ACT domain AS54_RS15935 PF00155 Aminotransferase class I and II AS54_RS15940 PF01264 Chorismate synthase AS54_RS15945 PF01817 Chorismate mutase type II AS54_RS15945 PF00793 DAHP synthetase I family AS54_RS15985 PF06725 3D domain AS54_RS15985 PF01476 LysM domain AS54_RS16000 PF00378 Enoyl-CoA hydratase/isomerase AS54_RS16005 PF00501 AMP-binding enzyme AS54_RS16005 PF13193 AMP-binding enzyme C-terminal domain AS54_RS16010 PF00989 PAS fold AS54_RS16010 PF00158 Sigma-54 interaction domain AS54_RS16010 PF02954 Bacterial regulatory protein, Fis family AS54_RS16020 PF06039 Malate:quinone oxidoreductase (Mqo) AS54_RS16025 PF13407 Periplasmic binding protein domain AS54_RS16030 PF02653 Branched-chain amino acid transport system / permease component AS54_RS16035 PF02653 Branched-chain amino acid transport system / permease component AS54_RS16040 PF00005 ABC transporter AS54_RS16045 PF00325 Bacterial regulatory proteins, crp family AS54_RS16045 PF04198 Putative sugar-binding domain AS54_RS16050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS54_RS16050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS54_RS16060 PF01791 DeoC/LacD family aldolase AS54_RS16085 PF03992 Antibiotic biosynthesis monooxygenase AS54_RS16105 PF07662 Na+ dependent nucleoside transporter C-terminus AS54_RS16105 PF01773 Na+ dependent nucleoside transporter N-terminus AS54_RS16110 PF00171 Aldehyde dehydrogenase family AS54_RS16115 PF00696 Amino acid kinase family AS54_RS16115 PF01472 PUA domain AS54_RS16120 PF03807 NADP oxidoreductase coenzyme F420-dependent AS54_RS16120 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS54_RS16125 PF01546 Peptidase family M20/M25/M40 AS54_RS16130 PF09339 IclR helix-turn-helix domain AS54_RS16130 PF01614 Bacterial transcriptional regulator AS54_RS16135 PF00324 Amino acid permease AS54_RS16140 PF01139 tRNA-splicing ligase RtcB AS54_RS16145 PF00487 Fatty acid desaturase AS54_RS16150 PF00245 Alkaline phosphatase AS54_RS16155 PF11188 Protein of unknown function (DUF2975) AS54_RS16160 PF13443 Cro/C1-type HTH DNA-binding domain AS54_RS16175 PF10086 YhfC intramembrane metalloprotease AS54_RS16185 PF04397 LytTr DNA-binding domain AS54_RS16185 PF00072 Response regulator receiver domain AS54_RS16195 PF13302 Acetyltransferase (GNAT) domain AS54_RS16200 PF12681 Glyoxalase-like domain AS54_RS16225 PF17863 AAA lid domain AS54_RS16225 PF07726 ATPase family associated with various cellular activities (AAA) AS54_RS16240 PF07690 Major Facilitator Superfamily AS54_RS16250 PF00535 Glycosyl transferase family 2 AS54_RS16265 PF00535 Glycosyl transferase family 2 AS54_RS16275 PF00535 Glycosyl transferase family 2 AS54_RS16285 PF00202 Aminotransferase class-III AS54_RS16290 PF06628 Catalase-related immune-responsive AS54_RS16290 PF00199 Catalase AS54_RS16300 PF13382 Adenine deaminase C-terminal domain AS54_RS16300 PF01979 Amidohydrolase family AS54_RS16305 PF00144 Beta-lactamase AS54_RS16330 PF00881 Nitroreductase family AS54_RS16335 PF01047 MarR family AS54_RS16340 PF00009 Elongation factor Tu GTP binding domain AS54_RS16340 PF00679 Elongation factor G C-terminus AS54_RS16340 PF03764 Elongation factor G, domain IV AS54_RS16340 PF14492 Elongation Factor G, domain II AS54_RS16350 PF00293 NUDIX domain AS54_RS16365 PF00005 ABC transporter AS54_RS16370 PF00392 Bacterial regulatory proteins, gntR family AS54_RS16380 PF16363 GDP-mannose 4,6 dehydratase AS54_RS16385 PF00005 ABC transporter AS54_RS16385 PF12704 MacB-like periplasmic core domain AS54_RS16385 PF02687 FtsX-like permease family AS54_RS16410 PF12833 Helix-turn-helix domain AS54_RS16415 PF00583 Acetyltransferase (GNAT) family AS54_RS16430 PF00892 EamA-like transporter family AS54_RS16435 PF00155 Aminotransferase class I and II AS54_RS16435 PF00392 Bacterial regulatory proteins, gntR family AS54_RS16445 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AS54_RS16450 PF13031 Protein of unknown function (DUF3892) AS54_RS16460 PF00672 HAMP domain AS54_RS16460 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS16465 PF00072 Response regulator receiver domain AS54_RS16465 PF00486 Transcriptional regulatory protein, C terminal AS54_RS16470 PF00561 alpha/beta hydrolase fold AS54_RS16500 PF01925 Sulfite exporter TauE/SafE AS54_RS16510 PF00324 Amino acid permease AS54_RS16520 PF08713 DNA alkylation repair enzyme AS54_RS16525 PF00376 MerR family regulatory protein AS54_RS16525 PF09278 MerR, DNA binding AS54_RS16540 PF04989 Cephalosporin hydroxylase AS54_RS16545 PF10502 Signal peptidase, peptidase S26 AS54_RS16550 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS16550 PF00905 Penicillin binding protein transpeptidase domain AS54_RS16555 PF02146 Sir2 family AS54_RS16560 PF01470 Pyroglutamyl peptidase AS54_RS16580 PF03746 LamB/YcsF family AS54_RS16585 PF02626 Carboxyltransferase domain, subdomain A and B AS54_RS16590 PF02682 Carboxyltransferase domain, subdomain C and D AS54_RS16595 PF09339 IclR helix-turn-helix domain AS54_RS16595 PF01614 Bacterial transcriptional regulator AS54_RS16600 PF10502 Signal peptidase, peptidase S26 AS54_RS16605 PF03932 CutC family AS54_RS16610 PF07454 Stage II sporulation protein P (SpoIIP) AS54_RS16625 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AS54_RS16625 PF02770 Acyl-CoA dehydrogenase, middle domain AS54_RS16625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS54_RS16645 PF07670 Nucleoside recognition AS54_RS16665 PF00440 Bacterial regulatory proteins, tetR family AS54_RS16670 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AS54_RS16670 PF00391 PEP-utilising enzyme, mobile domain AS54_RS16680 PF00753 Metallo-beta-lactamase superfamily AS54_RS16695 PF07875 Coat F domain AS54_RS16700 PF08892 YqcI/YcgG family AS54_RS16705 PF01810 LysE type translocator AS54_RS16710 PF00324 Amino acid permease AS54_RS16720 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS54_RS16725 PF10710 Protein of unknown function (DUF2512) AS54_RS16730 PF11553 Protein of unknown function (DUF3231) AS54_RS16735 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS54_RS16740 PF00107 Zinc-binding dehydrogenase AS54_RS16740 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS16740 PF13823 Alcohol dehydrogenase GroES-associated AS54_RS16755 PF00817 impB/mucB/samB family AS54_RS16755 PF11799 impB/mucB/samB family C-terminal domain AS54_RS16755 PF11798 IMS family HHH motif AS54_RS16765 PF00144 Beta-lactamase AS54_RS16770 PF00149 Calcineurin-like phosphoesterase AS54_RS16770 PF02872 5'-nucleotidase, C-terminal domain AS54_RS16770 PF17936 Bacterial Ig domain AS54_RS16775 PF03992 Antibiotic biosynthesis monooxygenase AS54_RS16785 PF01544 CorA-like Mg2+ transporter protein AS54_RS16800 PF11181 Heat induced stress protein YflT AS54_RS16810 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS16810 PF00107 Zinc-binding dehydrogenase AS54_RS16820 PF00067 Cytochrome P450 AS54_RS16825 PF17922 Tetracyclin repressor-like, C-terminal domain AS54_RS16825 PF00440 Bacterial regulatory proteins, tetR family AS54_RS16830 PF07859 alpha/beta hydrolase fold AS54_RS16835 PF07859 alpha/beta hydrolase fold AS54_RS16845 PF03073 TspO/MBR family AS54_RS16850 PF00875 DNA photolyase AS54_RS16850 PF03441 FAD binding domain of DNA photolyase AS54_RS16860 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AS54_RS16865 PF00361 Proton-conducting membrane transporter AS54_RS16865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AS54_RS16870 PF10057 Uncharacterized conserved protein (DUF2294) AS54_RS16885 PF07726 ATPase family associated with various cellular activities (AAA) AS54_RS16885 PF17863 AAA lid domain AS54_RS16890 PF01040 UbiA prenyltransferase family AS54_RS16895 PF00561 alpha/beta hydrolase fold AS54_RS16900 PF12996 DUF based on E. rectale Gene description (DUF3880) AS54_RS16905 PF00005 ABC transporter AS54_RS16910 PF02687 FtsX-like permease family AS54_RS16920 PF00072 Response regulator receiver domain AS54_RS16920 PF04397 LytTr DNA-binding domain AS54_RS16925 PF01297 Zinc-uptake complex component A periplasmic AS54_RS16930 PF00950 ABC 3 transport family AS54_RS16935 PF00005 ABC transporter AS54_RS16955 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS54_RS16960 PF01758 Sodium Bile acid symporter family AS54_RS16965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS16970 PF01022 Bacterial regulatory protein, arsR family AS54_RS16985 PF00012 Hsp70 protein AS54_RS16990 PF07690 Major Facilitator Superfamily AS54_RS17005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS17015 PF00144 Beta-lactamase AS54_RS17035 PF12802 MarR family AS54_RS17040 PF00175 Oxidoreductase NAD-binding domain AS54_RS17040 PF00667 FAD binding domain AS54_RS17040 PF00258 Flavodoxin AS54_RS17040 PF00067 Cytochrome P450 AS54_RS17050 PF07690 Major Facilitator Superfamily AS54_RS17075 PF00072 Response regulator receiver domain AS54_RS17075 PF00486 Transcriptional regulatory protein, C terminal AS54_RS17080 PF00672 HAMP domain AS54_RS17080 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS17080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS17110 PF00291 Pyridoxal-phosphate dependent enzyme AS54_RS17120 PF00144 Beta-lactamase AS54_RS17135 PF00753 Metallo-beta-lactamase superfamily AS54_RS17140 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AS54_RS17150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS54_RS17150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS54_RS17165 PF02073 Thermophilic metalloprotease (M29) AS54_RS17180 PF04072 Leucine carboxyl methyltransferase AS54_RS17200 PF01043 SecA preprotein cross-linking domain AS54_RS17200 PF07516 SecA Wing and Scaffold domain AS54_RS17200 PF00271 Helicase conserved C-terminal domain AS54_RS17200 PF07517 SecA DEAD-like domain AS54_RS17200 PF02810 SEC-C motif AS54_RS17215 PF00005 ABC transporter AS54_RS17220 PF02687 FtsX-like permease family AS54_RS17240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS17240 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS17240 PF00672 HAMP domain AS54_RS17245 PF00072 Response regulator receiver domain AS54_RS17245 PF00486 Transcriptional regulatory protein, C terminal AS54_RS17255 PF01047 MarR family AS54_RS17260 PF00583 Acetyltransferase (GNAT) family AS54_RS17265 PF04299 Putative FMN-binding domain AS54_RS17270 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS54_RS17270 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS17275 PF07690 Major Facilitator Superfamily AS54_RS17280 PF02589 LUD domain AS54_RS17285 PF13183 4Fe-4S dicluster domain AS54_RS17285 PF11870 Domain of unknown function (DUF3390) AS54_RS17285 PF02589 LUD domain AS54_RS17290 PF02754 Cysteine-rich domain AS54_RS17295 PF03466 LysR substrate binding domain AS54_RS17295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS17320 PF02016 LD-carboxypeptidase N-terminal domain AS54_RS17320 PF17676 LD-carboxypeptidase C-terminal domain AS54_RS17330 PF00753 Metallo-beta-lactamase superfamily AS54_RS17335 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS17340 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS54_RS17340 PF01447 Thermolysin metallopeptidase, catalytic domain AS54_RS17340 PF03413 Peptidase propeptide and YPEB domain AS54_RS17340 PF07504 Fungalysin/Thermolysin Propeptide Motif AS54_RS17345 PF03009 Glycerophosphoryl diester phosphodiesterase family AS54_RS17355 PF02557 D-alanyl-D-alanine carboxypeptidase AS54_RS17360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS17360 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS17365 PF00486 Transcriptional regulatory protein, C terminal AS54_RS17365 PF00072 Response regulator receiver domain AS54_RS17370 PF00144 Beta-lactamase AS54_RS17380 PF01609 Transposase DDE domain AS54_RS17395 PF07690 Major Facilitator Superfamily AS54_RS17400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS54_RS17400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS54_RS17405 PF05116 Sucrose-6F-phosphate phosphohydrolase AS54_RS17410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS54_RS17415 PF00356 Bacterial regulatory proteins, lacI family AS54_RS17420 PF18801 response regulator aspartate phosphatase H, N terminal AS54_RS17460 PF00817 impB/mucB/samB family AS54_RS17460 PF11798 IMS family HHH motif AS54_RS17460 PF11799 impB/mucB/samB family C-terminal domain AS54_RS17475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS17475 PF02743 Cache domain AS54_RS17475 PF00672 HAMP domain AS54_RS17485 PF03313 Serine dehydratase alpha chain AS54_RS17490 PF01842 ACT domain AS54_RS17490 PF03315 Serine dehydratase beta chain AS54_RS17495 PF02661 Fic/DOC family AS54_RS17500 PF00202 Aminotransferase class-III AS54_RS17505 PF17788 HypF Kae1-like domain AS54_RS17505 PF01300 Telomere recombination AS54_RS17505 PF00708 Acylphosphatase AS54_RS17505 PF07503 HypF finger AS54_RS17510 PF00586 AIR synthase related protein, N-terminal domain AS54_RS17510 PF02769 AIR synthase related protein, C-terminal domain AS54_RS17515 PF00857 Isochorismatase family AS54_RS17520 PF01037 Lrp/AsnC ligand binding domain AS54_RS17525 PF13520 Amino acid permease AS54_RS17540 PF01842 ACT domain AS54_RS17540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS54_RS17540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS54_RS17545 PF00266 Aminotransferase class-V AS54_RS17560 PF04542 Sigma-70 region 2 AS54_RS17560 PF08281 Sigma-70, region 4 AS54_RS17575 PF07883 Cupin domain AS54_RS17580 PF01497 Periplasmic binding protein AS54_RS17580 PF12833 Helix-turn-helix domain AS54_RS17595 PF04740 LXG domain of WXG superfamily AS54_RS17595 PF14436 Bacterial EndoU nuclease AS54_RS17600 PF01804 Penicillin amidase AS54_RS17610 PF01476 LysM domain AS54_RS17610 PF01510 N-acetylmuramoyl-L-alanine amidase AS54_RS17610 PF01471 Putative peptidoglycan binding domain AS54_RS17620 PF00440 Bacterial regulatory proteins, tetR family AS54_RS17620 PF08361 MAATS-type transcriptional repressor, C-terminal region AS54_RS17625 PF07690 Major Facilitator Superfamily AS54_RS17660 PF14044 NETI protein AS54_RS17665 PF07690 Major Facilitator Superfamily AS54_RS17670 PF12697 Alpha/beta hydrolase family AS54_RS17675 PF01047 MarR family AS54_RS17680 PF07690 Major Facilitator Superfamily AS54_RS17695 PF12679 ABC-2 family transporter protein AS54_RS17700 PF13732 Domain of unknown function (DUF4162) AS54_RS17700 PF00005 ABC transporter AS54_RS17705 PF13396 Phospholipase_D-nuclease N-terminal AS54_RS17715 PF17314 Family of unknown function (DUF5360) AS54_RS17720 PF00893 Small Multidrug Resistance protein AS54_RS17725 PF00440 Bacterial regulatory proteins, tetR family AS54_RS17735 PF17440 Thiol-activated cytolysin beta sandwich domain AS54_RS17735 PF01289 Thiol-activated cytolysin AS54_RS17745 PF02667 Short chain fatty acid transporter AS54_RS17755 PF02525 Flavodoxin-like fold AS54_RS17775 PF14256 YwiC-like protein AS54_RS17785 PF00005 ABC transporter AS54_RS17790 PF02361 Cobalt transport protein AS54_RS17805 PF03737 Aldolase/RraA AS54_RS17810 PF03606 C4-dicarboxylate anaerobic carrier AS54_RS17815 PF04231 Endonuclease I AS54_RS17820 PF04073 Aminoacyl-tRNA editing domain AS54_RS17825 PF00144 Beta-lactamase AS54_RS17830 PF00072 Response regulator receiver domain AS54_RS17830 PF00196 Bacterial regulatory proteins, luxR family AS54_RS17835 PF03129 Anticodon binding domain AS54_RS17835 PF13393 Histidyl-tRNA synthetase AS54_RS17850 PF01638 HxlR-like helix-turn-helix AS54_RS17855 PF00881 Nitroreductase family AS54_RS17865 PF00224 Pyruvate kinase, barrel domain AS54_RS17865 PF00391 PEP-utilising enzyme, mobile domain AS54_RS17865 PF02887 Pyruvate kinase, alpha/beta domain AS54_RS17885 PF00005 ABC transporter AS54_RS17910 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS17915 PF12323 Helix-turn-helix domain AS54_RS17915 PF07282 Putative transposase DNA-binding domain AS54_RS17915 PF01385 Probable transposase AS54_RS17935 PF13350 Tyrosine phosphatase family AS54_RS17955 PF00293 NUDIX domain AS54_RS17955 PF13344 Haloacid dehalogenase-like hydrolase AS54_RS17960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS17965 PF00480 ROK family AS54_RS17970 PF07690 Major Facilitator Superfamily AS54_RS17975 PF12464 Maltose acetyltransferase AS54_RS17975 PF14602 Hexapeptide repeat of succinyl-transferase AS54_RS17985 PF12704 MacB-like periplasmic core domain AS54_RS17985 PF02687 FtsX-like permease family AS54_RS17985 PF00005 ABC transporter AS54_RS17990 PF00579 tRNA synthetases class I (W and Y) AS54_RS18000 PF01594 AI-2E family transporter AS54_RS18020 PF08241 Methyltransferase domain AS54_RS18030 PF07690 Major Facilitator Superfamily AS54_RS18050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS18060 PF03471 Transporter associated domain AS54_RS18060 PF01595 Cyclin M transmembrane N-terminal domain AS54_RS18060 PF00571 CBS domain AS54_RS18065 PF13411 MerR HTH family regulatory protein AS54_RS18070 PF00892 EamA-like transporter family AS54_RS18075 PF00805 Pentapeptide repeats (8 copies) AS54_RS18085 PF10282 Lactonase, 7-bladed beta-propeller AS54_RS18090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS54_RS18090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS54_RS18095 PF02447 GntP family permease AS54_RS18100 PF00923 Transaldolase/Fructose-6-phosphate aldolase AS54_RS18105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS54_RS18105 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AS54_RS18110 PF02780 Transketolase, C-terminal domain AS54_RS18110 PF02779 Transketolase, pyrimidine binding domain AS54_RS18110 PF00456 Transketolase, thiamine diphosphate binding domain AS54_RS18115 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AS54_RS18115 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AS54_RS18135 PF03928 Haem-degrading AS54_RS18170 PF03960 ArsC family AS54_RS18180 PF00392 Bacterial regulatory proteins, gntR family AS54_RS18180 PF07702 UTRA domain AS54_RS18185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS54_RS18185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS54_RS18220 PF02567 Phenazine biosynthesis-like protein AS54_RS18230 PF00106 short chain dehydrogenase AS54_RS18240 PF13302 Acetyltransferase (GNAT) domain AS54_RS18245 PF00501 AMP-binding enzyme AS54_RS18245 PF13193 AMP-binding enzyme C-terminal domain AS54_RS18250 PF02525 Flavodoxin-like fold AS54_RS18255 PF01638 HxlR-like helix-turn-helix AS54_RS18270 PF01022 Bacterial regulatory protein, arsR family AS54_RS18275 PF01522 Polysaccharide deacetylase AS54_RS18280 PF12791 Anti-sigma factor N-terminus AS54_RS18285 PF04542 Sigma-70 region 2 AS54_RS18290 PF02517 CPBP intramembrane metalloprotease AS54_RS18295 PF00440 Bacterial regulatory proteins, tetR family AS54_RS18315 PF05656 Protein of unknown function (DUF805) AS54_RS18340 PF01061 ABC-2 type transporter AS54_RS18345 PF13732 Domain of unknown function (DUF4162) AS54_RS18345 PF00005 ABC transporter AS54_RS18360 PF03063 Prismane/CO dehydrogenase family AS54_RS18370 PF00753 Metallo-beta-lactamase superfamily AS54_RS18375 PF01471 Putative peptidoglycan binding domain AS54_RS18375 PF01183 Glycosyl hydrolases family 25 AS54_RS18440 PF00753 Metallo-beta-lactamase superfamily AS54_RS18455 PF03551 Transcriptional regulator PadR-like family AS54_RS18460 PF00107 Zinc-binding dehydrogenase AS54_RS18460 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS18465 PF00324 Amino acid permease AS54_RS18470 PF07690 Major Facilitator Superfamily AS54_RS18495 PF02585 GlcNAc-PI de-N-acetylase AS54_RS18500 PF08830 Protein of unknown function (DUF1806) AS54_RS18505 PF03600 Citrate transporter AS54_RS18520 PF01497 Periplasmic binding protein AS54_RS18525 PF01032 FecCD transport family AS54_RS18530 PF01032 FecCD transport family AS54_RS18535 PF05675 Protein of unknown function (DUF817) AS54_RS18540 PF02567 Phenazine biosynthesis-like protein AS54_RS18545 PF13170 Protein of unknown function (DUF4003) AS54_RS18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS18560 PF03466 LysR substrate binding domain AS54_RS18565 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS18565 PF00107 Zinc-binding dehydrogenase AS54_RS18580 PF01713 Smr domain AS54_RS18580 PF00488 MutS domain V AS54_RS18595 PF09154 Domain of unknown function (DUF1939) AS54_RS18595 PF00128 Alpha amylase, catalytic domain AS54_RS18600 PF00797 N-acetyltransferase AS54_RS18605 PF08439 Oligopeptidase F AS54_RS18605 PF01432 Peptidase family M3 AS54_RS18610 PF00144 Beta-lactamase AS54_RS18620 PF07690 Major Facilitator Superfamily AS54_RS18625 PF03466 LysR substrate binding domain AS54_RS18625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS18640 PF03009 Glycerophosphoryl diester phosphodiesterase family AS54_RS18660 PF01494 FAD binding domain AS54_RS18665 PF01022 Bacterial regulatory protein, arsR family AS54_RS18670 PF08240 Alcohol dehydrogenase GroES-like domain AS54_RS18670 PF00107 Zinc-binding dehydrogenase AS54_RS18675 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AS54_RS18680 PF18801 response regulator aspartate phosphatase H, N terminal AS54_RS18685 PF04299 Putative FMN-binding domain AS54_RS18690 PF04229 GrpB protein AS54_RS18700 PF01758 Sodium Bile acid symporter family AS54_RS18705 PF02913 FAD linked oxidases, C-terminal domain AS54_RS18705 PF01565 FAD binding domain AS54_RS18730 PF00132 Bacterial transferase hexapeptide (six repeats) AS54_RS18735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS54_RS18740 PF00535 Glycosyl transferase family 2 AS54_RS18745 PF00378 Enoyl-CoA hydratase/isomerase AS54_RS18750 PF18496 Collagenase G catalytic helper subdomain AS54_RS18750 PF01752 Collagenase AS54_RS18750 PF08453 Peptidase family M9 N-terminal AS54_RS18755 PF02308 MgtC family AS54_RS18770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS18775 PF04294 VanW like protein AS54_RS18785 PF13039 Protein of unknown function (DUF3900) AS54_RS18785 PF13037 Domain of unknown function (DUF3898) AS54_RS18805 PF00313 'Cold-shock' DNA-binding domain AS54_RS18815 PF00258 Flavodoxin AS54_RS18825 PF00293 NUDIX domain AS54_RS18850 PF13276 HTH-like domain AS54_RS18850 PF00665 Integrase core domain AS54_RS18850 PF13333 Integrase core domain AS54_RS18870 PF04225 Opacity-associated protein A LysM-like domain AS54_RS18870 PF01551 Peptidase family M23 AS54_RS18880 PF01183 Glycosyl hydrolases family 25 AS54_RS18880 PF01471 Putative peptidoglycan binding domain AS54_RS18925 PF00106 short chain dehydrogenase AS54_RS18935 PF00206 Lyase AS54_RS18935 PF14698 Argininosuccinate lyase C-terminal AS54_RS18945 PF01156 Inosine-uridine preferring nucleoside hydrolase AS54_RS18950 PF00474 Sodium:solute symporter family AS54_RS18960 PF00171 Aldehyde dehydrogenase family AS54_RS18970 PF14151 YfhD-like protein AS54_RS18975 PF13243 Squalene-hopene cyclase C-terminal domain AS54_RS18975 PF13249 Squalene-hopene cyclase N-terminal domain AS54_RS18980 PF02681 Divergent PAP2 family AS54_RS18985 PF00892 EamA-like transporter family AS54_RS18990 PF06961 Protein of unknown function (DUF1294) AS54_RS19005 PF10609 NUBPL iron-transfer P-loop NTPase AS54_RS19015 PF02391 MoaE protein AS54_RS19020 PF03453 MoeA N-terminal region (domain I and II) AS54_RS19020 PF03454 MoeA C-terminal region (domain IV) AS54_RS19020 PF00994 Probable molybdopterin binding domain AS54_RS19025 PF00899 ThiF family AS54_RS19030 PF01226 Formate/nitrite transporter AS54_RS19035 PF04055 Radical SAM superfamily AS54_RS19035 PF06463 Molybdenum Cofactor Synthesis C AS54_RS19040 PF02634 FdhD/NarQ family AS54_RS19045 PF10057 Uncharacterized conserved protein (DUF2294) AS54_RS19050 PF07849 Protein of unknown function (DUF1641) AS54_RS19055 PF00384 Molybdopterin oxidoreductase AS54_RS19055 PF00037 4Fe-4S binding domain AS54_RS19055 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS54_RS19055 PF01568 Molydopterin dinucleotide binding domain AS54_RS19055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS54_RS19065 PF03323 Bacillus/Clostridium GerA spore germination protein AS54_RS19105 PF08241 Methyltransferase domain AS54_RS19110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS19115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS19120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS54_RS19125 PF00375 Sodium:dicarboxylate symporter family AS54_RS19130 PF03816 Cell envelope-related transcriptional attenuator domain AS54_RS19140 PF04542 Sigma-70 region 2 AS54_RS19140 PF08281 Sigma-70, region 4 AS54_RS19150 PF00005 ABC transporter AS54_RS19150 PF13732 Domain of unknown function (DUF4162) AS54_RS19160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS54_RS19160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS54_RS19170 PF00521 DNA gyrase/topoisomerase IV, subunit A AS54_RS19170 PF03989 DNA gyrase C-terminal domain, beta-propeller AS54_RS19175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS19175 PF00986 DNA gyrase B subunit, carboxyl terminus AS54_RS19175 PF00204 DNA gyrase B AS54_RS19175 PF01751 Toprim domain AS54_RS19185 PF13380 CoA binding domain AS54_RS19190 PF13180 PDZ domain AS54_RS19195 PF00072 Response regulator receiver domain AS54_RS19195 PF00486 Transcriptional regulatory protein, C terminal AS54_RS19200 PF04055 Radical SAM superfamily AS54_RS19205 PF03477 ATP cone domain AS54_RS19205 PF13597 Anaerobic ribonucleoside-triphosphate reductase AS54_RS19210 PF02660 Glycerol-3-phosphate acyltransferase AS54_RS19215 PF01521 Iron-sulphur cluster biosynthesis AS54_RS19220 PF03061 Thioesterase superfamily AS54_RS19225 PF00704 Glycosyl hydrolases family 18 AS54_RS19225 PF01476 LysM domain AS54_RS19235 PF08177 Small acid-soluble spore protein N family AS54_RS19240 PF13040 Fur-regulated basic protein B AS54_RS19245 PF00929 Exonuclease AS54_RS19245 PF01336 OB-fold nucleic acid binding domain AS54_RS19245 PF14579 Helix-hairpin-helix motif AS54_RS19245 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS54_RS19245 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS54_RS19245 PF02811 PHP domain AS54_RS19245 PF11490 DNA polymerase III polC-type N-terminus II AS54_RS19250 PF00578 AhpC/TSA family AS54_RS19260 PF00664 ABC transporter transmembrane region AS54_RS19260 PF00005 ABC transporter AS54_RS19265 PF00694 Aconitase C-terminal domain AS54_RS19265 PF00330 Aconitase family (aconitate hydratase) AS54_RS19275 PF01522 Polysaccharide deacetylase AS54_RS19285 PF08179 Small acid-soluble spore protein P family AS54_RS19295 PF07690 Major Facilitator Superfamily AS54_RS19305 PF02272 DHHA1 domain AS54_RS19305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS54_RS19305 PF01411 tRNA synthetases class II (A) AS54_RS19310 PF13344 Haloacid dehalogenase-like hydrolase AS54_RS19310 PF00293 NUDIX domain AS54_RS19320 PF02803 Thiolase, C-terminal domain AS54_RS19320 PF00108 Thiolase, N-terminal domain AS54_RS19325 PF00501 AMP-binding enzyme AS54_RS19325 PF13193 AMP-binding enzyme C-terminal domain AS54_RS19330 PF02632 BioY family AS54_RS19335 PF13193 AMP-binding enzyme C-terminal domain AS54_RS19335 PF00501 AMP-binding enzyme AS54_RS19345 PF00005 ABC transporter AS54_RS19360 PF05532 CsbD-like AS54_RS19390 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS19390 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS54_RS19400 PF13426 PAS domain AS54_RS19400 PF00989 PAS fold AS54_RS19400 PF13188 PAS domain AS54_RS19400 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS19400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS19405 PF01738 Dienelactone hydrolase family AS54_RS19410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS19415 PF00474 Sodium:solute symporter family AS54_RS19420 PF01645 Conserved region in glutamate synthase AS54_RS19425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS54_RS19430 PF02559 CarD-like/TRCF domain AS54_RS19435 PF00491 Arginase family AS54_RS19440 PF01979 Amidohydrolase family AS54_RS19445 PF17392 Urocanase C-terminal domain AS54_RS19445 PF17391 Urocanase N-terminal domain AS54_RS19445 PF01175 Urocanase Rossmann-like domain AS54_RS19450 PF00221 Aromatic amino acid lyase AS54_RS19455 PF09021 HutP AS54_RS19460 PF01209 ubiE/COQ5 methyltransferase family AS54_RS19485 PF11084 Protein of unknown function (DUF2621) AS54_RS19505 PF07301 Protein of unknown function (DUF1453) AS54_RS19510 PF02683 Cytochrome C biogenesis protein transmembrane region AS54_RS19520 PF01546 Peptidase family M20/M25/M40 AS54_RS19520 PF07687 Peptidase dimerisation domain AS54_RS19530 PF00005 ABC transporter AS54_RS19540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS19540 PF03466 LysR substrate binding domain AS54_RS19545 PF03788 LrgA family AS54_RS19550 PF04172 LrgB-like family AS54_RS19555 PF00293 NUDIX domain AS54_RS19555 PF13344 Haloacid dehalogenase-like hydrolase AS54_RS19565 PF01925 Sulfite exporter TauE/SafE AS54_RS19575 PF01471 Putative peptidoglycan binding domain AS54_RS19575 PF01510 N-acetylmuramoyl-L-alanine amidase AS54_RS19590 PF00664 ABC transporter transmembrane region AS54_RS19590 PF00005 ABC transporter AS54_RS19595 PF00005 ABC transporter AS54_RS19595 PF00664 ABC transporter transmembrane region AS54_RS19600 PF03672 Uncharacterised protein family (UPF0154) AS54_RS19605 PF10747 Sporulation inhibitor of replication protein SirA AS54_RS19610 PF02780 Transketolase, C-terminal domain AS54_RS19610 PF00456 Transketolase, thiamine diphosphate binding domain AS54_RS19610 PF02779 Transketolase, pyrimidine binding domain AS54_RS19615 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS19620 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS19625 PF00005 ABC transporter AS54_RS19635 PF00149 Calcineurin-like phosphoesterase AS54_RS19635 PF02872 5'-nucleotidase, C-terminal domain AS54_RS19640 PF05979 Bacterial protein of unknown function (DUF896) AS54_RS19645 PF00239 Resolvase, N terminal domain AS54_RS19650 PF00717 Peptidase S24-like AS54_RS19650 PF01726 LexA DNA binding domain AS54_RS19665 PF03551 Transcriptional regulator PadR-like family AS54_RS19670 PF00120 Glutamine synthetase, catalytic domain AS54_RS19670 PF03951 Glutamine synthetase, beta-Grasp domain AS54_RS19675 PF13411 MerR HTH family regulatory protein AS54_RS19680 PF06838 Methionine gamma-lyase AS54_RS19685 PF16360 GTP-binding GTPase Middle Region AS54_RS19685 PF01926 50S ribosome-binding GTPase AS54_RS19685 PF13167 GTP-binding GTPase N-terminal AS54_RS19690 PF03458 UPF0126 domain AS54_RS19700 PF17866 AAA lid domain AS54_RS19700 PF00004 ATPase family associated with various cellular activities (AAA) AS54_RS19715 PF17209 Hfq protein AS54_RS19730 PF06725 3D domain AS54_RS19730 PF01476 LysM domain AS54_RS19735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS54_RS19735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS54_RS19740 PF00294 pfkB family carbohydrate kinase AS54_RS19745 PF00455 DeoR C terminal sensor domain AS54_RS19745 PF08220 DeoR-like helix-turn-helix domain AS54_RS19750 PF00465 Iron-containing alcohol dehydrogenase AS54_RS19755 PF04238 Protein of unknown function (DUF420) AS54_RS19770 PF00324 Amino acid permease AS54_RS19775 PF00041 Fibronectin type III domain AS54_RS19775 PF00704 Glycosyl hydrolases family 18 AS54_RS19780 PF10518 TAT (twin-arginine translocation) pathway signal sequence AS54_RS19780 PF00149 Calcineurin-like phosphoesterase AS54_RS19785 PF01226 Formate/nitrite transporter AS54_RS19790 PF00216 Bacterial DNA-binding protein AS54_RS19810 PF00403 Heavy-metal-associated domain AS54_RS19815 PF00403 Heavy-metal-associated domain AS54_RS19820 PF02583 Metal-sensitive transcriptional repressor AS54_RS19830 PF00756 Putative esterase AS54_RS19835 PF00005 ABC transporter AS54_RS19840 PF01032 FecCD transport family AS54_RS19845 PF01032 FecCD transport family AS54_RS19850 PF01497 Periplasmic binding protein AS54_RS19855 PF03372 Endonuclease/Exonuclease/phosphatase family AS54_RS19860 PF12833 Helix-turn-helix domain AS54_RS19860 PF02805 Metal binding domain of Ada AS54_RS19865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS54_RS19865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS54_RS19870 PF00730 HhH-GPD superfamily base excision DNA repair protein AS54_RS19870 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain AS54_RS19875 PF01546 Peptidase family M20/M25/M40 AS54_RS19875 PF07687 Peptidase dimerisation domain AS54_RS19895 PF00561 alpha/beta hydrolase fold AS54_RS19900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS19905 PF00990 Diguanylate cyclase, GGDEF domain AS54_RS19905 PF00563 EAL domain AS54_RS19905 PF03707 Bacterial signalling protein N terminal repeat AS54_RS19910 PF03033 Glycosyltransferase family 28 N-terminal domain AS54_RS19910 PF04101 Glycosyltransferase family 28 C-terminal domain AS54_RS19920 PF16363 GDP-mannose 4,6 dehydratase AS54_RS19925 PF08485 Polysaccharide biosynthesis protein C-terminal AS54_RS19925 PF02719 Polysaccharide biosynthesis protein AS54_RS19950 PF10787 Uncharacterised protein from bacillus cereus group AS54_RS19960 PF00155 Aminotransferase class I and II AS54_RS19960 PF00392 Bacterial regulatory proteins, gntR family AS54_RS19970 PF00388 Phosphatidylinositol-specific phospholipase C, X domain AS54_RS19975 PF00082 Subtilase family AS54_RS19980 PF07486 Cell Wall Hydrolase AS54_RS19990 PF00884 Sulfatase AS54_RS19995 PF00350 Dynamin family AS54_RS20005 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AS54_RS20010 PF08676 MutL C terminal dimerisation domain AS54_RS20010 PF01119 DNA mismatch repair protein, C-terminal domain AS54_RS20015 PF05190 MutS family domain IV AS54_RS20015 PF05192 MutS domain III AS54_RS20015 PF05188 MutS domain II AS54_RS20015 PF01624 MutS domain I AS54_RS20015 PF00488 MutS domain V AS54_RS20020 PF10628 Outer spore coat protein E (CotE) AS54_RS20025 PF06133 Control of competence regulator ComK, YlbF/YmcA AS54_RS20030 PF04055 Radical SAM superfamily AS54_RS20030 PF01938 TRAM domain AS54_RS20030 PF00919 Uncharacterized protein family UPF0004 AS54_RS20035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS54_RS20040 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AS54_RS20040 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AS54_RS20040 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AS54_RS20045 PF01244 Membrane dipeptidase (Peptidase family M19) AS54_RS20050 PF04232 Stage V sporulation protein S (SpoVS) AS54_RS20055 PF13277 YmdB-like protein AS54_RS20060 PF12072 Domain of unknown function (DUF3552) AS54_RS20060 PF00013 KH domain AS54_RS20060 PF01966 HD domain AS54_RS20065 PF00154 recA bacterial DNA recombination protein AS54_RS20070 PF02464 Competence-damaged protein AS54_RS20070 PF18146 Damage-inducible protein CinA KH domain AS54_RS20070 PF00994 Probable molybdopterin binding domain AS54_RS20075 PF01066 CDP-alcohol phosphatidyltransferase AS54_RS20080 PF13464 Domain of unknown function (DUF4115) AS54_RS20085 PF11868 Protein of unknown function (DUF3388) AS54_RS20090 PF11588 Protein of unknown function (DUF3243) AS54_RS20100 PF00675 Insulinase (Peptidase family M16) AS54_RS20100 PF05193 Peptidase M16 inactive domain AS54_RS20105 PF05193 Peptidase M16 inactive domain AS54_RS20110 PF02653 Branched-chain amino acid transport system / permease component AS54_RS20115 PF02653 Branched-chain amino acid transport system / permease component AS54_RS20120 PF00005 ABC transporter AS54_RS20125 PF02608 ABC transporter substrate-binding protein PnrA-like AS54_RS20130 PF00392 Bacterial regulatory proteins, gntR family AS54_RS20130 PF07702 UTRA domain AS54_RS20135 PF01580 FtsK/SpoIIIE family AS54_RS20135 PF09397 Ftsk gamma domain AS54_RS20135 PF17854 FtsK alpha domain AS54_RS20140 PF14035 YlzJ-like protein AS54_RS20145 PF00574 Clp protease AS54_RS20150 PF17770 Ribonuclease J C-terminal domain AS54_RS20150 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AS54_RS20150 PF00753 Metallo-beta-lactamase superfamily AS54_RS20160 PF00701 Dihydrodipicolinate synthetase family AS54_RS20165 PF00696 Amino acid kinase family AS54_RS20165 PF13840 ACT domain AS54_RS20170 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS54_RS20170 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS54_RS20175 PF02441 Flavoprotein AS54_RS20180 PF16924 Dipicolinate synthase subunit A N-terminal domain AS54_RS20180 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS54_RS20185 PF05239 PRC-barrel domain AS54_RS20190 PF05193 Peptidase M16 inactive domain AS54_RS20190 PF00675 Insulinase (Peptidase family M16) AS54_RS20195 PF01522 Polysaccharide deacetylase AS54_RS20200 PF03725 3' exoribonuclease family, domain 2 AS54_RS20200 PF00575 S1 RNA binding domain AS54_RS20200 PF01138 3' exoribonuclease family, domain 1 AS54_RS20200 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AS54_RS20200 PF00013 KH domain AS54_RS20205 PF00312 Ribosomal protein S15 AS54_RS20210 PF01687 Riboflavin kinase AS54_RS20210 PF06574 FAD synthetase AS54_RS20215 PF01509 TruB family pseudouridylate synthase (N terminal domain) AS54_RS20215 PF16198 tRNA pseudouridylate synthase B C-terminal domain AS54_RS20220 PF02033 Ribosome-binding factor A AS54_RS20225 PF04456 Protein of unknown function (DUF503) AS54_RS20230 PF04760 Translation initiation factor IF-2, N-terminal region AS54_RS20230 PF00009 Elongation factor Tu GTP binding domain AS54_RS20230 PF11987 Translation-initiation factor 2 AS54_RS20235 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AS54_RS20240 PF04296 Protein of unknown function (DUF448) AS54_RS20245 PF00575 S1 RNA binding domain AS54_RS20245 PF08529 NusA N-terminal domain AS54_RS20245 PF13184 NusA-like KH domain AS54_RS20250 PF17384 RimP C-terminal SH3 domain AS54_RS20250 PF02576 RimP N-terminal domain AS54_RS20255 PF14480 DNA polymerase III polC-type N-terminus I AS54_RS20255 PF02811 PHP domain AS54_RS20255 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS54_RS20255 PF00929 Exonuclease AS54_RS20255 PF14579 Helix-hairpin-helix motif AS54_RS20255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS54_RS20255 PF11490 DNA polymerase III polC-type N-terminus II AS54_RS20260 PF01348 Type II intron maturase AS54_RS20260 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AS54_RS20270 PF14480 DNA polymerase III polC-type N-terminus I AS54_RS20270 PF11490 DNA polymerase III polC-type N-terminus II AS54_RS20270 PF00929 Exonuclease AS54_RS20270 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS54_RS20270 PF14579 Helix-hairpin-helix motif AS54_RS20270 PF02811 PHP domain AS54_RS20270 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS54_RS20275 PF04073 Aminoacyl-tRNA editing domain AS54_RS20275 PF03129 Anticodon binding domain AS54_RS20275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS54_RS20280 PF02163 Peptidase family M50 AS54_RS20280 PF17820 PDZ domain AS54_RS20285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AS54_RS20285 PF13288 DXP reductoisomerase C-terminal domain AS54_RS20285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AS54_RS20295 PF01255 Putative undecaprenyl diphosphate synthase AS54_RS20300 PF01765 Ribosome recycling factor AS54_RS20305 PF00696 Amino acid kinase family AS54_RS20310 PF00889 Elongation factor TS AS54_RS20315 PF00318 Ribosomal protein S2 AS54_RS20320 PF06018 CodY GAF-like domain AS54_RS20320 PF08222 CodY helix-turn-helix domain AS54_RS20325 PF07724 AAA domain (Cdc48 subfamily) AS54_RS20325 PF10431 C-terminal, D2-small domain, of ClpB protein AS54_RS20325 PF00004 ATPase family associated with various cellular activities (AAA) AS54_RS20330 PF00227 Proteasome subunit AS54_RS20335 PF02899 Phage integrase, N-terminal SAM-like domain AS54_RS20335 PF00589 Phage integrase family AS54_RS20340 PF01134 Glucose inhibited division protein A AS54_RS20345 PF01131 DNA topoisomerase AS54_RS20345 PF01751 Toprim domain AS54_RS20345 PF01396 Topoisomerase DNA binding C4 zinc finger AS54_RS20350 PF02481 DNA recombination-mediator protein A AS54_RS20355 PF00549 CoA-ligase AS54_RS20355 PF02629 CoA binding domain AS54_RS20360 PF08442 ATP-grasp domain AS54_RS20360 PF00549 CoA-ligase AS54_RS20365 PF01351 Ribonuclease HII AS54_RS20370 PF01926 50S ribosome-binding GTPase AS54_RS20375 PF10502 Signal peptidase, peptidase S26 AS54_RS20380 PF01245 Ribosomal protein L19 AS54_RS20385 PF01746 tRNA (Guanine-1)-methyltransferase AS54_RS20390 PF01782 RimM N-terminal domain AS54_RS20390 PF05239 PRC-barrel domain AS54_RS20400 PF00886 Ribosomal protein S16 AS54_RS20405 PF02881 SRP54-type protein, helical bundle domain AS54_RS20405 PF02978 Signal peptide binding domain AS54_RS20405 PF00448 SRP54-type protein, GTPase domain AS54_RS20410 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AS54_RS20415 PF02881 SRP54-type protein, helical bundle domain AS54_RS20415 PF00448 SRP54-type protein, GTPase domain AS54_RS20420 PF06470 SMC proteins Flexible Hinge Domain AS54_RS20420 PF02463 RecF/RecN/SMC N terminal domain AS54_RS20425 PF00035 Double-stranded RNA binding motif AS54_RS20425 PF14622 Ribonuclease-III-like AS54_RS20430 PF00550 Phosphopantetheine attachment site AS54_RS20440 PF00698 Acyl transferase domain AS54_RS20445 PF02504 Fatty acid synthesis protein AS54_RS20450 PF03061 Thioesterase superfamily AS54_RS20455 PF00270 DEAD/DEAH box helicase AS54_RS20455 PF17191 RecG wedge domain AS54_RS20455 PF00271 Helicase conserved C-terminal domain AS54_RS20460 PF02734 DAK2 domain AS54_RS20460 PF13684 Dihydroxyacetone kinase family AS54_RS20465 PF03780 Asp23 family, cell envelope-related function AS54_RS20470 PF00830 Ribosomal L28 family AS54_RS20475 PF08183 Stage V sporulation protein family AS54_RS20480 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AS54_RS20480 PF04263 Thiamin pyrophosphokinase, catalytic domain AS54_RS20485 PF00834 Ribulose-phosphate 3 epimerase family AS54_RS20490 PF16745 RsgA N-terminal domain AS54_RS20490 PF03193 RsgA GTPase AS54_RS20495 PF00069 Protein kinase domain AS54_RS20495 PF03793 PASTA domain AS54_RS20505 PF04055 Radical SAM superfamily AS54_RS20510 PF01029 NusB family AS54_RS20510 PF01189 16S rRNA methyltransferase RsmB/F AS54_RS20515 PF02911 Formyl transferase, C-terminal domain AS54_RS20515 PF00551 Formyl transferase AS54_RS20520 PF01327 Polypeptide deformylase AS54_RS20525 PF18074 Primosomal protein N C-terminal domain AS54_RS20525 PF00271 Helicase conserved C-terminal domain AS54_RS20525 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AS54_RS20525 PF04851 Type III restriction enzyme, res subunit AS54_RS20525 PF17764 3′ DNA-binding domain (3′BD) AS54_RS20530 PF04127 DNA / pantothenate metabolism flavoprotein AS54_RS20530 PF02441 Flavoprotein AS54_RS20535 PF01192 RNA polymerase Rpb6 AS54_RS20540 PF00625 Guanylate kinase AS54_RS20545 PF04025 Domain of unknown function (DUF370) AS54_RS20550 PF03755 YicC-like family, N-terminal region AS54_RS20550 PF08340 Domain of unknown function (DUF1732) AS54_RS20555 PF00690 Cation transporter/ATPase, N-terminus AS54_RS20555 PF00689 Cation transporting ATPase, C-terminus AS54_RS20560 PF05670 NFACT protein RNA binding domain AS54_RS20565 PF01321 Creatinase/Prolidase N-terminal domain AS54_RS20565 PF00557 Metallopeptidase family M24 AS54_RS20600 PF00156 Phosphoribosyl transferase domain AS54_RS20605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AS54_RS20610 PF01180 Dihydroorotate dehydrogenase AS54_RS20615 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AS54_RS20615 PF00175 Oxidoreductase NAD-binding domain AS54_RS20620 PF02142 MGS-like domain AS54_RS20620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS54_RS20620 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS54_RS20625 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AS54_RS20625 PF00117 Glutamine amidotransferase class-I AS54_RS20630 PF01979 Amidohydrolase family AS54_RS20635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS54_RS20635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS54_RS20640 PF00860 Permease family AS54_RS20645 PF00156 Phosphoribosyl transferase domain AS54_RS20650 PF00849 RNA pseudouridylate synthase AS54_RS20650 PF01479 S4 domain AS54_RS20655 PF01252 Signal peptidase (SPase) II AS54_RS20665 PF06827 Zinc finger found in FPG and IleRS AS54_RS20665 PF08264 Anticodon-binding domain of tRNA AS54_RS20665 PF00133 tRNA synthetases class I (I, L, M and V) AS54_RS20670 PF05103 DivIVA protein AS54_RS20675 PF01479 S4 domain AS54_RS20675 PF17774 Putative RNA-binding domain in YlmH AS54_RS20680 PF02325 YGGT family AS54_RS20685 PF04472 Cell division protein SepF AS54_RS20690 PF01168 Alanine racemase, N-terminal domain AS54_RS20695 PF02578 Multi-copper polyphenol oxidoreductase laccase AS54_RS20700 PF05239 PRC-barrel domain AS54_RS20705 PF04542 Sigma-70 region 2 AS54_RS20705 PF04539 Sigma-70 region 3 AS54_RS20705 PF04545 Sigma-70, region 4 AS54_RS20710 PF04545 Sigma-70, region 4 AS54_RS20710 PF04542 Sigma-70 region 2 AS54_RS20715 PF03419 Sporulation factor SpoIIGA AS54_RS20720 PF00091 Tubulin/FtsZ family, GTPase domain AS54_RS20720 PF12327 FtsZ family, C-terminal domain AS54_RS20725 PF02491 SHS2 domain inserted in FTSA AS54_RS20730 PF03799 Cell division protein FtsQ AS54_RS20730 PF08478 POTRA domain, FtsQ-type AS54_RS20735 PF01565 FAD binding domain AS54_RS20735 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AS54_RS20740 PF03033 Glycosyltransferase family 28 N-terminal domain AS54_RS20740 PF04101 Glycosyltransferase family 28 C-terminal domain AS54_RS20745 PF01098 Cell cycle protein AS54_RS20750 PF08245 Mur ligase middle domain AS54_RS20750 PF02875 Mur ligase family, glutamate ligase domain AS54_RS20755 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AS54_RS20755 PF00953 Glycosyl transferase family 4 AS54_RS20760 PF08245 Mur ligase middle domain AS54_RS20760 PF01225 Mur ligase family, catalytic domain AS54_RS20760 PF02875 Mur ligase family, glutamate ligase domain AS54_RS20765 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS20765 PF03793 PASTA domain AS54_RS20765 PF00905 Penicillin binding protein transpeptidase domain AS54_RS20770 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS20770 PF03793 PASTA domain AS54_RS20770 PF00905 Penicillin binding protein transpeptidase domain AS54_RS20775 PF04977 Septum formation initiator AS54_RS20780 PF01795 MraW methylase family AS54_RS20785 PF10079 Bacillithiol biosynthesis BshC AS54_RS20790 PF02558 Ketopantoate reductase PanE/ApbA AS54_RS20790 PF08546 Ketopantoate reductase PanE/ApbA C terminal AS54_RS20795 PF00583 Acetyltransferase (GNAT) family AS54_RS20805 PF01783 Ribosomal L32p protein family AS54_RS20810 PF02620 Large ribosomal RNA subunit accumulation protein YceD AS54_RS20815 PF05636 HIGH Nucleotidyl Transferase AS54_RS20820 PF05362 Lon protease (S16) C-terminal proteolytic domain AS54_RS20820 PF13180 PDZ domain AS54_RS20825 PF01734 Patatin-like phospholipase AS54_RS20830 PF07670 Nucleoside recognition AS54_RS20835 PF01467 Cytidylyltransferase-like AS54_RS20850 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AS54_RS20855 PF06133 Control of competence regulator ComK, YlbF/YmcA AS54_RS20860 PF00300 Histidine phosphatase superfamily (branch 1) AS54_RS20865 PF14003 YlbE-like protein AS54_RS20870 PF14071 Putative coat protein AS54_RS20875 PF00188 Cysteine-rich secretory protein family AS54_RS20875 PF14504 CAP-associated N-terminal AS54_RS20880 PF08868 YugN-like family AS54_RS20885 PF00795 Carbon-nitrogen hydrolase AS54_RS20890 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AS54_RS20895 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AS54_RS20900 PF00510 Cytochrome c oxidase subunit III AS54_RS20905 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS54_RS20910 PF00034 Cytochrome c AS54_RS20910 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AS54_RS20910 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AS54_RS20915 PF01040 UbiA prenyltransferase family AS54_RS20920 PF02628 Cytochrome oxidase assembly protein AS54_RS20925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS54_RS20925 PF02436 Conserved carboxylase domain AS54_RS20925 PF00364 Biotin-requiring enzyme AS54_RS20925 PF00289 Biotin carboxylase, N-terminal domain AS54_RS20925 PF02785 Biotin carboxylase C-terminal domain AS54_RS20925 PF00682 HMGL-like AS54_RS20930 PF01098 Cell cycle protein AS54_RS20935 PF07408 Protein of unknown function (DUF1507) AS54_RS20945 PF02562 PhoH-like protein AS54_RS20945 PF13638 PIN domain AS54_RS20955 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) AS54_RS20965 PF14036 YlaH-like protein AS54_RS20970 PF14492 Elongation Factor G, domain II AS54_RS20970 PF00679 Elongation factor G C-terminus AS54_RS20970 PF03144 Elongation factor Tu domain 2 AS54_RS20970 PF00009 Elongation factor Tu GTP binding domain AS54_RS20980 PF00459 Inositol monophosphatase family AS54_RS20990 PF06335 Protein of unknown function (DUF1054) AS54_RS20995 PF05256 Uncharacterised protein family (UPF0223) AS54_RS21000 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AS54_RS21000 PF01276 Orn/Lys/Arg decarboxylase, major domain AS54_RS21040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS21040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS54_RS21045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS54_RS21045 PF00364 Biotin-requiring enzyme AS54_RS21045 PF02817 e3 binding domain AS54_RS21050 PF02780 Transketolase, C-terminal domain AS54_RS21050 PF02779 Transketolase, pyrimidine binding domain AS54_RS21055 PF00676 Dehydrogenase E1 component AS54_RS21065 PF01327 Polypeptide deformylase AS54_RS21075 PF07288 Protein of unknown function (DUF1447) AS54_RS21080 PF00753 Metallo-beta-lactamase superfamily AS54_RS21080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AS54_RS21080 PF17770 Ribonuclease J C-terminal domain AS54_RS21085 PF02080 TrkA-C domain AS54_RS21085 PF02254 TrkA-N domain AS54_RS21095 PF07687 Peptidase dimerisation domain AS54_RS21095 PF01546 Peptidase family M20/M25/M40 AS54_RS21100 PF00132 Bacterial transferase hexapeptide (six repeats) AS54_RS21100 PF14602 Hexapeptide repeat of succinyl-transferase AS54_RS21100 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AS54_RS21105 PF03466 LysR substrate binding domain AS54_RS21105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS21120 PF04308 Ribonuclease H-like AS54_RS21130 PF08796 Protein of unknown function (DUF1797) AS54_RS21145 PF00563 EAL domain AS54_RS21145 PF10388 EAL-domain associated signalling protein domain AS54_RS21155 PF00149 Calcineurin-like phosphoesterase AS54_RS21155 PF10518 TAT (twin-arginine translocation) pathway signal sequence AS54_RS21165 PF13089 Polyphosphate kinase N-terminal domain AS54_RS21165 PF17941 Polyphosphate kinase C-terminal domain 1 AS54_RS21165 PF13090 Polyphosphate kinase C-terminal domain 2 AS54_RS21165 PF02503 Polyphosphate kinase middle domain AS54_RS21170 PF02541 Ppx/GppA phosphatase family AS54_RS21205 PF07690 Major Facilitator Superfamily AS54_RS21220 PF01717 Cobalamin-independent synthase, Catalytic domain AS54_RS21220 PF08267 Cobalamin-independent synthase, N-terminal domain AS54_RS21230 PF14040 Deoxyribonuclease NucA/NucB AS54_RS21240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS21240 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS21250 PF00155 Aminotransferase class I and II AS54_RS21255 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS54_RS21255 PF00356 Bacterial regulatory proteins, lacI family AS54_RS21260 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS21265 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS21270 PF13416 Bacterial extracellular solute-binding protein AS54_RS21275 PF02903 Alpha amylase, N-terminal ig-like domain AS54_RS21275 PF16657 Maltogenic Amylase, C-terminal domain AS54_RS21275 PF00128 Alpha amylase, catalytic domain AS54_RS21280 PF00128 Alpha amylase, catalytic domain AS54_RS21280 PF16657 Maltogenic Amylase, C-terminal domain AS54_RS21285 PF17912 MalK OB fold domain AS54_RS21285 PF03459 TOBE domain AS54_RS21285 PF00005 ABC transporter AS54_RS21330 PF02803 Thiolase, C-terminal domain AS54_RS21330 PF00108 Thiolase, N-terminal domain AS54_RS21335 PF00293 NUDIX domain AS54_RS21365 PF03551 Transcriptional regulator PadR-like family AS54_RS21380 PF01008 Initiation factor 2 subunit family AS54_RS21385 PF01636 Phosphotransferase enzyme family AS54_RS21390 PF00795 Carbon-nitrogen hydrolase AS54_RS21395 PF00155 Aminotransferase class I and II AS54_RS21400 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AS54_RS21400 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AS54_RS21410 PF00596 Class II Aldolase and Adducin N-terminal domain AS54_RS21415 PF03079 ARD/ARD' family AS54_RS21430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS54_RS21430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS54_RS21435 PF00990 Diguanylate cyclase, GGDEF domain AS54_RS21435 PF08448 PAS fold AS54_RS21440 PF00881 Nitroreductase family AS54_RS21455 PF02896 PEP-utilising enzyme, TIM barrel domain AS54_RS21455 PF05524 PEP-utilising enzyme, N-terminal AS54_RS21455 PF00391 PEP-utilising enzyme, mobile domain AS54_RS21460 PF00381 PTS HPr component phosphorylation site AS54_RS21465 PF00367 phosphotransferase system, EIIB AS54_RS21465 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS54_RS21465 PF02378 Phosphotransferase system, EIIC AS54_RS21470 PF03123 CAT RNA binding domain AS54_RS21470 PF00874 PRD domain AS54_RS21480 PF07702 UTRA domain AS54_RS21480 PF00392 Bacterial regulatory proteins, gntR family AS54_RS21485 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AS54_RS21490 PF01979 Amidohydrolase family AS54_RS21500 PF04079 Segregation and condensation complex subunit ScpB AS54_RS21510 PF02616 Segregation and condensation protein ScpA AS54_RS21520 PF03745 Domain of unknown function (DUF309) AS54_RS21525 PF00583 Acetyltransferase (GNAT) family AS54_RS21530 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AS54_RS21535 PF06207 Protein of unknown function (DUF1002) AS54_RS21545 PF03323 Bacillus/Clostridium GerA spore germination protein AS54_RS21550 PF14097 Stage V sporulation protein AE1 AS54_RS21555 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AS54_RS21560 PF07451 Stage V sporulation protein AD (SpoVAD) AS54_RS21565 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AS54_RS21570 PF13782 Stage V sporulation protein AB AS54_RS21575 PF12164 Stage V sporulation protein AA AS54_RS21585 PF00209 Sodium:neurotransmitter symporter family AS54_RS21590 PF04542 Sigma-70 region 2 AS54_RS21590 PF04539 Sigma-70 region 3 AS54_RS21590 PF04545 Sigma-70, region 4 AS54_RS21595 PF13581 Histidine kinase-like ATPase domain AS54_RS21600 PF01740 STAS domain AS54_RS21605 PF00768 D-alanyl-D-alanine carboxypeptidase AS54_RS21605 PF07943 Penicillin-binding protein 5, C-terminal domain AS54_RS21610 PF00392 Bacterial regulatory proteins, gntR family AS54_RS21615 PF00005 ABC transporter AS54_RS21635 PF01047 MarR family AS54_RS21645 PF00860 Permease family AS54_RS21650 PF01544 CorA-like Mg2+ transporter protein AS54_RS21655 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AS54_RS21655 PF00591 Glycosyl transferase family, a/b domain AS54_RS21655 PF02885 Glycosyl transferase family, helical bundle domain AS54_RS21660 PF01048 Phosphorylase superfamily AS54_RS21665 PF01676 Metalloenzyme superfamily AS54_RS21675 PF00589 Phage integrase family AS54_RS21675 PF02899 Phage integrase, N-terminal SAM-like domain AS54_RS21680 PF14004 Protein of unknown function (DUF4227) AS54_RS21685 PF01475 Ferric uptake regulator family AS54_RS21690 PF01944 Stage II sporulation protein M AS54_RS21700 PF00293 NUDIX domain AS54_RS21705 PF13072 Mother cell inhibitor of FtsZ AS54_RS21710 PF00248 Aldo/keto reductase family AS54_RS21715 PF00248 Aldo/keto reductase family AS54_RS21720 PF13673 Acetyltransferase (GNAT) domain AS54_RS21720 PF04229 GrpB protein AS54_RS21730 PF00565 Staphylococcal nuclease homologue AS54_RS21730 PF02872 5'-nucleotidase, C-terminal domain AS54_RS21730 PF00149 Calcineurin-like phosphoesterase AS54_RS21730 PF00746 LPXTG cell wall anchor motif AS54_RS21740 PF12146 Serine aminopeptidase, S33 AS54_RS21745 PF13726 Na+-H+ antiporter family AS54_RS21745 PF03553 Na+/H+ antiporter family AS54_RS21750 PF00356 Bacterial regulatory proteins, lacI family AS54_RS21755 PF00583 Acetyltransferase (GNAT) family AS54_RS21760 PF12146 Serine aminopeptidase, S33 AS54_RS21765 PF10827 Protein of unknown function (DUF2552) AS54_RS21775 PF01872 RibD C-terminal domain AS54_RS21775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS54_RS21780 PF00677 Lumazine binding domain AS54_RS21785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AS54_RS21785 PF00925 GTP cyclohydrolase II AS54_RS21790 PF00885 6,7-dimethyl-8-ribityllumazine synthase AS54_RS21800 PF04055 Radical SAM superfamily AS54_RS21800 PF06968 Biotin and Thiamin Synthesis associated domain AS54_RS21805 PF13847 Methyltransferase domain AS54_RS21810 PF12697 Alpha/beta hydrolase family AS54_RS21810 PF08241 Methyltransferase domain AS54_RS21815 PF00155 Aminotransferase class I and II AS54_RS21825 PF00202 Aminotransferase class-III AS54_RS21835 PF03553 Na+/H+ antiporter family AS54_RS21840 PF00149 Calcineurin-like phosphoesterase AS54_RS21840 PF02872 5'-nucleotidase, C-terminal domain AS54_RS21850 PF13404 AsnC-type helix-turn-helix domain AS54_RS21850 PF01037 Lrp/AsnC ligand binding domain AS54_RS21865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS54_RS21865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS54_RS21870 PF00202 Aminotransferase class-III AS54_RS21875 PF00696 Amino acid kinase family AS54_RS21880 PF01960 ArgJ family AS54_RS21885 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS54_RS21885 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS54_RS21895 PF00106 short chain dehydrogenase AS54_RS21900 PF00753 Metallo-beta-lactamase superfamily AS54_RS21905 PF03807 NADP oxidoreductase coenzyme F420-dependent AS54_RS21905 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS54_RS21910 PF03313 Serine dehydratase alpha chain AS54_RS21915 PF01842 ACT domain AS54_RS21915 PF03315 Serine dehydratase beta chain AS54_RS21925 PF00753 Metallo-beta-lactamase superfamily AS54_RS21925 PF12706 Beta-lactamase superfamily domain AS54_RS21935 PF11799 impB/mucB/samB family C-terminal domain AS54_RS21935 PF00817 impB/mucB/samB family AS54_RS21935 PF11798 IMS family HHH motif AS54_RS21945 PF07687 Peptidase dimerisation domain AS54_RS21945 PF01546 Peptidase family M20/M25/M40 AS54_RS21950 PF13302 Acetyltransferase (GNAT) domain AS54_RS21965 PF03734 L,D-transpeptidase catalytic domain AS54_RS21970 PF06081 Aromatic acid exporter family member 1 AS54_RS21970 PF11728 Putative aromatic acid exporter C-terminal domain AS54_RS21975 PF00005 ABC transporter AS54_RS21980 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS21985 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS54_RS21990 PF06491 Disulphide isomerase AS54_RS21995 PF11208 Protein of unknown function (DUF2992) AS54_RS22000 PF00293 NUDIX domain AS54_RS22000 PF09297 NADH pyrophosphatase zinc ribbon domain AS54_RS22005 PF01098 Cell cycle protein AS54_RS22015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS54_RS22015 PF02817 e3 binding domain AS54_RS22015 PF00364 Biotin-requiring enzyme AS54_RS22020 PF02779 Transketolase, pyrimidine binding domain AS54_RS22020 PF02780 Transketolase, C-terminal domain AS54_RS22025 PF00676 Dehydrogenase E1 component AS54_RS22030 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS22030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS54_RS22035 PF00871 Acetokinase family AS54_RS22040 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS54_RS22040 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS54_RS22045 PF01515 Phosphate acetyl/butaryl transferase AS54_RS22055 PF00158 Sigma-54 interaction domain AS54_RS22055 PF02954 Bacterial regulatory protein, Fis family AS54_RS22055 PF00989 PAS fold AS54_RS22065 PF03009 Glycerophosphoryl diester phosphodiesterase family AS54_RS22070 PF14174 YycC-like protein AS54_RS22080 PF08769 Sporulation initiation factor Spo0A C terminal AS54_RS22080 PF00072 Response regulator receiver domain AS54_RS22085 PF05580 SpoIVB peptidase S55 AS54_RS22085 PF17820 PDZ domain AS54_RS22090 PF13476 AAA domain AS54_RS22095 PF01316 Arginine repressor, DNA binding domain AS54_RS22095 PF02863 Arginine repressor, C-terminal domain AS54_RS22100 PF01728 FtsJ-like methyltransferase AS54_RS22100 PF01479 S4 domain AS54_RS22105 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AS54_RS22105 PF02779 Transketolase, pyrimidine binding domain AS54_RS22105 PF02780 Transketolase, C-terminal domain AS54_RS22110 PF00348 Polyprenyl synthetase AS54_RS22115 PF02609 Exonuclease VII small subunit AS54_RS22120 PF02601 Exonuclease VII, large subunit AS54_RS22120 PF13742 OB-fold nucleic acid binding domain AS54_RS22125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AS54_RS22125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AS54_RS22130 PF01029 NusB family AS54_RS22135 PF03780 Asp23 family, cell envelope-related function AS54_RS22140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS54_RS22140 PF02785 Biotin carboxylase C-terminal domain AS54_RS22140 PF00289 Biotin carboxylase, N-terminal domain AS54_RS22145 PF00364 Biotin-requiring enzyme AS54_RS22155 PF12685 SpoIIIAH-like protein AS54_RS22165 PF09581 Stage III sporulation protein AF (Spore_III_AF) AS54_RS22170 PF09546 Stage III sporulation protein AE (spore_III_AE) AS54_RS22175 PF06686 Stage III sporulation protein AC/AD protein family AS54_RS22180 PF06686 Stage III sporulation protein AC/AD protein family AS54_RS22185 PF09548 Stage III sporulation protein AB (spore_III_AB) AS54_RS22210 PF09285 Elongation factor P, C-terminal AS54_RS22210 PF08207 Elongation factor P (EF-P) KOW-like domain AS54_RS22210 PF01132 Elongation factor P (EF-P) OB domain AS54_RS22215 PF01321 Creatinase/Prolidase N-terminal domain AS54_RS22215 PF00557 Metallopeptidase family M24 AS54_RS22220 PF01220 Dehydroquinase class II AS54_RS22225 PF11085 Conserved membrane protein YqhR AS54_RS22230 PF07136 Protein of unknown function (DUF1385) AS54_RS22240 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS22245 PF02742 Iron dependent repressor, metal binding and dimerisation domain AS54_RS22245 PF01325 Iron dependent repressor, N-terminal DNA binding domain AS54_RS22255 PF03551 Transcriptional regulator PadR-like family AS54_RS22270 PF03099 Biotin/lipoate A/B protein ligase family AS54_RS22275 PF00581 Rhodanese-like domain AS54_RS22280 PF00356 Bacterial regulatory proteins, lacI family AS54_RS22280 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS54_RS22290 PF00893 Small Multidrug Resistance protein AS54_RS22295 PF00893 Small Multidrug Resistance protein AS54_RS22335 PF00005 ABC transporter AS54_RS22340 PF00392 Bacterial regulatory proteins, gntR family AS54_RS22355 PF02347 Glycine cleavage system P-protein AS54_RS22360 PF02347 Glycine cleavage system P-protein AS54_RS22365 PF08669 Glycine cleavage T-protein C-terminal barrel domain AS54_RS22365 PF01571 Aminomethyltransferase folate-binding domain AS54_RS22370 PF00271 Helicase conserved C-terminal domain AS54_RS22370 PF00176 SNF2 family N-terminal domain AS54_RS22375 PF11079 Bacterial protein YqhG of unknown function AS54_RS22395 PF14038 YqzE-like protein AS54_RS22400 PF01202 Shikimate kinase AS54_RS22425 PF07963 Prokaryotic N-terminal methylation motif AS54_RS22435 PF00482 Type II secretion system (T2SS), protein F AS54_RS22440 PF00437 Type II/IV secretion system protein AS54_RS22450 PF11117 Protein of unknown function (DUF2626) AS54_RS22455 PF00375 Sodium:dicarboxylate symporter family AS54_RS22485 PF04101 Glycosyltransferase family 28 C-terminal domain AS54_RS22485 PF03033 Glycosyltransferase family 28 N-terminal domain AS54_RS22490 PF02310 B12 binding domain AS54_RS22490 PF00809 Pterin binding enzyme AS54_RS22490 PF02574 Homocysteine S-methyltransferase AS54_RS22490 PF02965 Vitamin B12 dependent methionine synthase, activation domain AS54_RS22490 PF02607 B12 binding domain AS54_RS22495 PF02574 Homocysteine S-methyltransferase AS54_RS22495 PF02219 Methylenetetrahydrofolate reductase AS54_RS22505 PF01053 Cys/Met metabolism PLP-dependent enzyme AS54_RS22510 PF01053 Cys/Met metabolism PLP-dependent enzyme AS54_RS22520 PF01022 Bacterial regulatory protein, arsR family AS54_RS22530 PF00753 Metallo-beta-lactamase superfamily AS54_RS22535 PF10958 Protein of unknown function (DUF2759) AS54_RS22540 PF00480 ROK family AS54_RS22545 PF06014 Bacterial protein of unknown function (DUF910) AS54_RS22550 PF01812 5-formyltetrahydrofolate cyclo-ligase family AS54_RS22555 PF00471 Ribosomal protein L33 AS54_RS22560 PF00483 Nucleotidyl transferase AS54_RS22565 PF01895 PhoU domain AS54_RS22570 PF00005 ABC transporter AS54_RS22575 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS22580 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS22585 PF12849 PBP superfamily domain AS54_RS22590 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS22590 PF00905 Penicillin binding protein transpeptidase domain AS54_RS22595 PF07690 Major Facilitator Superfamily AS54_RS22600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS54_RS22600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS54_RS22620 PF04551 GcpE protein AS54_RS22625 PF01475 Ferric uptake regulator family AS54_RS22630 PF00950 ABC 3 transport family AS54_RS22635 PF00005 ABC transporter AS54_RS22640 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS22640 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS54_RS22645 PF11116 Protein of unknown function (DUF2624) AS54_RS22650 PF01261 Xylose isomerase-like TIM barrel AS54_RS22655 PF00271 Helicase conserved C-terminal domain AS54_RS22655 PF00270 DEAD/DEAH box helicase AS54_RS22665 PF02401 LytB protein AS54_RS22670 PF01784 NIF3 (NGG1p interacting factor 3) AS54_RS22675 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AS54_RS22680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS54_RS22685 PF04539 Sigma-70 region 3 AS54_RS22685 PF04545 Sigma-70, region 4 AS54_RS22685 PF00140 Sigma-70 factor, region 1.2 AS54_RS22685 PF03979 Sigma-70 factor, region 1.1 AS54_RS22685 PF04542 Sigma-70 region 2 AS54_RS22690 PF08275 DNA primase catalytic core, N-terminal domain AS54_RS22690 PF01807 CHC2 zinc finger AS54_RS22690 PF10410 DnaB-helicase binding domain of primase AS54_RS22705 PF03618 Kinase/pyrophosphorylase AS54_RS22710 PF08279 HTH domain AS54_RS22710 PF00571 CBS domain AS54_RS22715 PF11967 Recombination protein O N terminal AS54_RS22715 PF02565 Recombination protein O C terminal AS54_RS22725 PF01926 50S ribosome-binding GTPase AS54_RS22725 PF07650 KH domain AS54_RS22730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS54_RS22735 PF01219 Prokaryotic diacylglycerol kinase AS54_RS22740 PF02130 Uncharacterized protein family UPF0054 AS54_RS22745 PF07698 7TM receptor with intracellular HD hydrolase AS54_RS22745 PF07697 7TM-HD extracellular AS54_RS22745 PF01966 HD domain AS54_RS22750 PF02562 PhoH-like protein AS54_RS22755 PF06898 Putative stage IV sporulation protein YqfD AS54_RS22765 PF07873 YabP family AS54_RS22770 PF09424 Yqey-like protein AS54_RS22775 PF01165 Ribosomal protein S21 AS54_RS22780 PF01938 TRAM domain AS54_RS22780 PF00919 Uncharacterized protein family UPF0004 AS54_RS22780 PF04055 Radical SAM superfamily AS54_RS22785 PF04452 RNA methyltransferase AS54_RS22795 PF00684 DnaJ central domain AS54_RS22795 PF01556 DnaJ C terminal domain AS54_RS22795 PF00226 DnaJ domain AS54_RS22800 PF00012 Hsp70 protein AS54_RS22805 PF01025 GrpE AS54_RS22810 PF01628 HrcA protein C terminal domain AS54_RS22815 PF04055 Radical SAM superfamily AS54_RS22815 PF06969 HemN C-terminal domain AS54_RS22820 PF01638 HxlR-like helix-turn-helix AS54_RS22825 PF06421 GTP-binding protein LepA C-terminus AS54_RS22825 PF00679 Elongation factor G C-terminus AS54_RS22825 PF00009 Elongation factor Tu GTP binding domain AS54_RS22825 PF03144 Elongation factor Tu domain 2 AS54_RS22835 PF03418 Germination protease AS54_RS22840 PF01649 Ribosomal protein S20 AS54_RS22845 PF06144 DNA polymerase III, delta subunit AS54_RS22850 PF14141 YqzM-like protein AS54_RS22855 PF00753 Metallo-beta-lactamase superfamily AS54_RS22855 PF13567 Domain of unknown function (DUF4131) AS54_RS22855 PF03772 Competence protein AS54_RS22860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS54_RS22865 PF10531 SLBB domain AS54_RS22870 PF03807 NADP oxidoreductase coenzyme F420-dependent AS54_RS22870 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS54_RS22875 PF13649 Methyltransferase domain AS54_RS22885 PF01966 HD domain AS54_RS22890 PF01467 Cytidylyltransferase-like AS54_RS22895 PF01985 CRS1 / YhbY (CRM) domain AS54_RS22900 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AS54_RS22900 PF01488 Shikimate / quinate 5-dehydrogenase AS54_RS22900 PF08501 Shikimate dehydrogenase substrate binding domain AS54_RS22905 PF01926 50S ribosome-binding GTPase AS54_RS22920 PF02666 Phosphatidylserine decarboxylase AS54_RS22925 PF04542 Sigma-70 region 2 AS54_RS22925 PF04545 Sigma-70, region 4 AS54_RS22935 PF16244 Domain of unknown function (DUF4901) AS54_RS22940 PF00471 Ribosomal protein L33 AS54_RS22945 PF00881 Nitroreductase family AS54_RS22950 PF04607 Region found in RelA / SpoT proteins AS54_RS22960 PF00245 Alkaline phosphatase AS54_RS22970 PF08386 TAP-like protein AS54_RS22970 PF00561 alpha/beta hydrolase fold AS54_RS23005 PF00082 Subtilase family AS54_RS23005 PF02225 PA domain AS54_RS23005 PF13860 FlgD Ig-like domain AS54_RS23005 PF05922 Peptidase inhibitor I9 AS54_RS23010 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AS54_RS23020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS23025 PF07681 DoxX AS54_RS23055 PF00005 ABC transporter AS54_RS23060 PF01032 FecCD transport family AS54_RS23065 PF01497 Periplasmic binding protein AS54_RS23070 PF14143 YrhC-like protein AS54_RS23075 PF00171 Aldehyde dehydrogenase family AS54_RS23075 PF00465 Iron-containing alcohol dehydrogenase AS54_RS23080 PF01053 Cys/Met metabolism PLP-dependent enzyme AS54_RS23085 PF00291 Pyridoxal-phosphate dependent enzyme AS54_RS23090 PF01048 Phosphorylase superfamily AS54_RS23095 PF08241 Methyltransferase domain AS54_RS23110 PF00905 Penicillin binding protein transpeptidase domain AS54_RS23110 PF03717 Penicillin-binding Protein dimerisation domain AS54_RS23115 PF03449 Transcription elongation factor, N-terminal AS54_RS23115 PF01272 Transcription elongation factor, GreA/GreB, C-term AS54_RS23120 PF00485 Phosphoribulokinase / Uridine kinase family AS54_RS23125 PF16325 Peptidase family U32 C-terminal domain AS54_RS23125 PF01136 Peptidase family U32 AS54_RS23130 PF01136 Peptidase family U32 AS54_RS23135 PF01596 O-methyltransferase AS54_RS23140 PF02618 YceG-like family AS54_RS23145 PF06949 Protein of unknown function (DUF1292) AS54_RS23150 PF03652 Holliday junction resolvase AS54_RS23155 PF06135 IreB regulatory phosphoprotein AS54_RS23160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS54_RS23160 PF01411 tRNA synthetases class II (A) AS54_RS23160 PF02272 DHHA1 domain AS54_RS23170 PF01594 AI-2E family transporter AS54_RS23190 PF14490 Helix-hairpin-helix containing domain AS54_RS23190 PF13538 UvrD-like helicase C-terminal domain AS54_RS23190 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AS54_RS23205 PF00266 Aminotransferase class-V AS54_RS23210 PF02082 Transcriptional regulator AS54_RS23215 PF05496 Holliday junction DNA helicase RuvB P-loop domain AS54_RS23215 PF12002 MgsA AAA+ ATPase C terminal AS54_RS23215 PF16193 AAA C-terminal domain AS54_RS23230 PF00899 ThiF family AS54_RS23235 PF02938 GAD domain AS54_RS23235 PF00152 tRNA synthetases class II (D, K and N) AS54_RS23235 PF01336 OB-fold nucleic acid binding domain AS54_RS23240 PF03129 Anticodon binding domain AS54_RS23240 PF13393 Histidyl-tRNA synthetase AS54_RS23250 PF02580 D-Tyr-tRNA(Tyr) deacylase AS54_RS23255 PF13291 ACT domain AS54_RS23255 PF04607 Region found in RelA / SpoT proteins AS54_RS23255 PF02824 TGS domain AS54_RS23260 PF00156 Phosphoribosyl transferase domain AS54_RS23265 PF01368 DHH family AS54_RS23265 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AS54_RS23265 PF02272 DHHA1 domain AS54_RS23265 PF17768 RecJ OB domain AS54_RS23270 PF16916 Dimerisation domain of Zinc Transporter AS54_RS23270 PF01545 Cation efflux family AS54_RS23275 PF07549 SecD/SecF GG Motif AS54_RS23275 PF02355 Protein export membrane protein AS54_RS23280 PF13797 Post-transcriptional regulator AS54_RS23285 PF14667 Polysaccharide biosynthesis C-terminal domain AS54_RS23285 PF01943 Polysaccharide biosynthesis protein AS54_RS23290 PF04239 Protein of unknown function (DUF421) AS54_RS23300 PF02699 Preprotein translocase subunit AS54_RS23305 PF01702 Queuine tRNA-ribosyltransferase AS54_RS23310 PF02547 Queuosine biosynthesis protein AS54_RS23315 PF11146 Protein of unknown function (DUF2905) AS54_RS23320 PF05491 RuvB C-terminal winged helix domain AS54_RS23320 PF05496 Holliday junction DNA helicase RuvB P-loop domain AS54_RS23320 PF17864 RuvB AAA lid domain AS54_RS23325 PF01330 RuvA N terminal domain AS54_RS23325 PF07499 RuvA, C-terminal domain AS54_RS23330 PF01497 Periplasmic binding protein AS54_RS23340 PF00892 EamA-like transporter family AS54_RS23345 PF00892 EamA-like transporter family AS54_RS23350 PF01022 Bacterial regulatory protein, arsR family AS54_RS23365 PF01476 LysM domain AS54_RS23370 PF02445 Quinolinate synthetase A protein AS54_RS23375 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AS54_RS23375 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AS54_RS23380 PF00890 FAD binding domain AS54_RS23380 PF02910 Fumarate reductase flavoprotein C-term AS54_RS23385 PF00266 Aminotransferase class-V AS54_RS23390 PF08279 HTH domain AS54_RS23390 PF02829 3H domain AS54_RS23395 PF03475 3-alpha domain AS54_RS23395 PF03473 MOSC domain AS54_RS23400 PF01842 ACT domain AS54_RS23400 PF00800 Prephenate dehydratase AS54_RS23405 PF02687 FtsX-like permease family AS54_RS23410 PF02687 FtsX-like permease family AS54_RS23415 PF00005 ABC transporter AS54_RS23420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS23425 PF00072 Response regulator receiver domain AS54_RS23425 PF00486 Transcriptional regulatory protein, C terminal AS54_RS23430 PF09269 Domain of unknown function (DUF1967) AS54_RS23430 PF01018 GTP1/OBG AS54_RS23430 PF01926 50S ribosome-binding GTPase AS54_RS23435 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS54_RS23435 PF14682 Sporulation initiation phospho-transferase B, C-terminal AS54_RS23440 PF01016 Ribosomal L27 protein AS54_RS23445 PF04327 Cysteine protease Prp AS54_RS23450 PF00829 Ribosomal prokaryotic L21 protein AS54_RS23455 PF10150 Ribonuclease E/G family AS54_RS23455 PF00575 S1 RNA binding domain AS54_RS23460 PF02163 Peptidase family M50 AS54_RS23465 PF01551 Peptidase family M23 AS54_RS23470 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AS54_RS23475 PF03775 Septum formation inhibitor MinC, C-terminal domain AS54_RS23485 PF04085 rod shape-determining protein MreC AS54_RS23495 PF04002 RadC-like JAB domain AS54_RS23500 PF02545 Maf-like protein AS54_RS23510 PF02875 Mur ligase family, glutamate ligase domain AS54_RS23510 PF08245 Mur ligase middle domain AS54_RS23515 PF10458 Valyl tRNA synthetase tRNA binding arm AS54_RS23515 PF08264 Anticodon-binding domain of tRNA AS54_RS23515 PF00133 tRNA synthetases class I (I, L, M and V) AS54_RS23525 PF01476 LysM domain AS54_RS23530 PF00202 Aminotransferase class-III AS54_RS23535 PF00490 Delta-aminolevulinic acid dehydratase AS54_RS23540 PF02602 Uroporphyrinogen-III synthase HemD AS54_RS23545 PF03900 Porphobilinogen deaminase, C-terminal domain AS54_RS23545 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AS54_RS23550 PF01578 Cytochrome C assembly protein AS54_RS23555 PF01488 Shikimate / quinate 5-dehydrogenase AS54_RS23555 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AS54_RS23555 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AS54_RS23560 PF01047 MarR family AS54_RS23565 PF02566 OsmC-like protein AS54_RS23570 PF01926 50S ribosome-binding GTPase AS54_RS23575 PF02190 ATP-dependent protease La (LON) substrate-binding domain AS54_RS23575 PF00004 ATPase family associated with various cellular activities (AAA) AS54_RS23575 PF05362 Lon protease (S16) C-terminal proteolytic domain AS54_RS23580 PF00004 ATPase family associated with various cellular activities (AAA) AS54_RS23580 PF05362 Lon protease (S16) C-terminal proteolytic domain AS54_RS23585 PF07724 AAA domain (Cdc48 subfamily) AS54_RS23585 PF06689 ClpX C4-type zinc finger AS54_RS23585 PF10431 C-terminal, D2-small domain, of ClpB protein AS54_RS23590 PF05698 Bacterial trigger factor protein (TF) C-terminus AS54_RS23590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS54_RS23590 PF05697 Bacterial trigger factor protein (TF) AS54_RS23610 PF11724 YvbH-like oligomerisation region AS54_RS23610 PF08000 Bacterial PH domain AS54_RS23625 PF12850 Calcineurin-like phosphoesterase superfamily domain AS54_RS23630 PF01725 Ham1 family AS54_RS23635 PF03725 3' exoribonuclease family, domain 2 AS54_RS23635 PF01138 3' exoribonuclease family, domain 1 AS54_RS23640 PF10646 Sporulation and spore germination AS54_RS23645 PF01177 Asp/Glu/Hydantoin racemase AS54_RS23650 PF07690 Major Facilitator Superfamily AS54_RS23660 PF00440 Bacterial regulatory proteins, tetR family AS54_RS23665 PF01965 DJ-1/PfpI family AS54_RS23675 PF00196 Bacterial regulatory proteins, luxR family AS54_RS23680 PF00860 Permease family AS54_RS23685 PF07969 Amidohydrolase family AS54_RS23690 PF04024 PspC domain AS54_RS23695 PF07883 Cupin domain AS54_RS23695 PF01381 Helix-turn-helix AS54_RS23700 PF13536 Putative multidrug resistance efflux transporter AS54_RS23705 PF00230 Major intrinsic protein AS54_RS23715 PF02082 Transcriptional regulator AS54_RS23725 PF13732 Domain of unknown function (DUF4162) AS54_RS23725 PF00005 ABC transporter AS54_RS23730 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AS54_RS23735 PF00691 OmpA family AS54_RS23735 PF13677 Membrane MotB of proton-channel complex MotA/MotB AS54_RS23740 PF01618 MotA/TolQ/ExbB proton channel family AS54_RS23745 PF02557 D-alanyl-D-alanine carboxypeptidase AS54_RS23750 PF03061 Thioesterase superfamily AS54_RS23755 PF13183 4Fe-4S dicluster domain AS54_RS23755 PF13085 2Fe-2S iron-sulfur cluster binding domain AS54_RS23760 PF02910 Fumarate reductase flavoprotein C-term AS54_RS23760 PF00890 FAD binding domain AS54_RS23765 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AS54_RS23770 PF10702 Protein of unknown function (DUF2507) AS54_RS23775 PF08459 UvrC Helix-hairpin-helix N-terminal AS54_RS23775 PF02151 UvrB/uvrC motif AS54_RS23775 PF01541 GIY-YIG catalytic domain AS54_RS23780 PF00085 Thioredoxin AS54_RS23785 PF01012 Electron transfer flavoprotein domain AS54_RS23785 PF00766 Electron transfer flavoprotein FAD-binding domain AS54_RS23790 PF01012 Electron transfer flavoprotein domain AS54_RS23795 PF00378 Enoyl-CoA hydratase/isomerase AS54_RS23800 PF00440 Bacterial regulatory proteins, tetR family AS54_RS23800 PF08359 YsiA-like protein, C-terminal region AS54_RS23805 PF00501 AMP-binding enzyme AS54_RS23805 PF13193 AMP-binding enzyme C-terminal domain AS54_RS23815 PF01497 Periplasmic binding protein AS54_RS23820 PF01032 FecCD transport family AS54_RS23825 PF05163 DinB family AS54_RS23850 PF00005 ABC transporter AS54_RS23855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS23855 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS23860 PF00072 Response regulator receiver domain AS54_RS23860 PF00486 Transcriptional regulatory protein, C terminal AS54_RS23870 PF09962 Uncharacterized conserved protein (DUF2196) AS54_RS23875 PF10672 S-adenosylmethionine-dependent methyltransferase AS54_RS23875 PF17785 PUA-like domain AS54_RS23885 PF03992 Antibiotic biosynthesis monooxygenase AS54_RS23890 PF04203 Sortase domain AS54_RS23895 PF00005 ABC transporter AS54_RS23900 PF01032 FecCD transport family AS54_RS23905 PF01497 Periplasmic binding protein AS54_RS23910 PF05031 Iron Transport-associated domain AS54_RS23915 PF05031 Iron Transport-associated domain AS54_RS23920 PF05525 Branched-chain amino acid transport protein AS54_RS23925 PF00849 RNA pseudouridylate synthase AS54_RS23925 PF01479 S4 domain AS54_RS23935 PF00488 MutS domain V AS54_RS23935 PF01713 Smr domain AS54_RS23940 PF14716 Helix-hairpin-helix domain AS54_RS23940 PF14791 DNA polymerase beta thumb AS54_RS23940 PF02811 PHP domain AS54_RS23945 PF02674 Colicin V production protein AS54_RS23950 PF05164 Cell division protein ZapA AS54_RS23955 PF01351 Ribonuclease HII AS54_RS23955 PF11858 Domain of unknown function (DUF3378) AS54_RS23975 PF01336 OB-fold nucleic acid binding domain AS54_RS23975 PF00152 tRNA synthetases class II (D, K and N) AS54_RS23980 PF03147 Ferredoxin-fold anticodon binding domain AS54_RS23980 PF03483 B3/4 domain AS54_RS23980 PF03484 tRNA synthetase B5 domain AS54_RS23980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AS54_RS23980 PF01588 Putative tRNA binding domain AS54_RS23985 PF01409 tRNA synthetases class II core domain (F) AS54_RS23985 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AS54_RS23990 PF00588 SpoU rRNA Methylase family AS54_RS23990 PF08032 RNA 2'-O ribose methyltransferase substrate binding AS54_RS23995 PF14098 Small, acid-soluble spore protein I AS54_RS24000 PF01966 HD domain AS54_RS24035 PF07690 Major Facilitator Superfamily AS54_RS24045 PF00440 Bacterial regulatory proteins, tetR family AS54_RS24045 PF16859 Tetracyclin repressor-like, C-terminal domain AS54_RS24050 PF05343 M42 glutamyl aminopeptidase AS54_RS24060 PF00453 Ribosomal protein L20 AS54_RS24065 PF01632 Ribosomal protein L35 AS54_RS24070 PF05198 Translation initiation factor IF-3, N-terminal domain AS54_RS24070 PF00707 Translation initiation factor IF-3, C-terminal domain AS54_RS24075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS54_RS24075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS54_RS24075 PF02824 TGS domain AS54_RS24075 PF03129 Anticodon binding domain AS54_RS24080 PF08812 YtxC-like family AS54_RS24085 PF01695 IstB-like ATP binding protein AS54_RS24085 PF07319 Primosomal protein DnaI N-terminus AS54_RS24090 PF07261 Replication initiation and membrane attachment AS54_RS24095 PF03477 ATP cone domain AS54_RS24100 PF02675 S-adenosylmethionine decarboxylase AS54_RS24105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS54_RS24105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS54_RS24110 PF01121 Dephospho-CoA kinase AS54_RS24115 PF02659 Putative manganese efflux pump AS54_RS24120 PF06827 Zinc finger found in FPG and IleRS AS54_RS24120 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AS54_RS24120 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AS54_RS24125 PF01367 5'-3' exonuclease, C-terminal SAM fold AS54_RS24125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS54_RS24125 PF00476 DNA polymerase family A AS54_RS24130 PF00989 PAS fold AS54_RS24130 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS24130 PF16736 Single Cache-like AS54_RS24130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS24135 PF00486 Transcriptional regulatory protein, C terminal AS54_RS24135 PF00072 Response regulator receiver domain AS54_RS24150 PF00056 lactate/malate dehydrogenase, NAD binding domain AS54_RS24150 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS54_RS24155 PF00180 Isocitrate/isopropylmalate dehydrogenase AS54_RS24160 PF00285 Citrate synthase, C-terminal domain AS54_RS24170 PF04284 Protein of unknown function (DUF441) AS54_RS24175 PF01594 AI-2E family transporter AS54_RS24180 PF04186 FxsA cytoplasmic membrane protein AS54_RS24185 PF02887 Pyruvate kinase, alpha/beta domain AS54_RS24185 PF00224 Pyruvate kinase, barrel domain AS54_RS24185 PF00391 PEP-utilising enzyme, mobile domain AS54_RS24190 PF00365 Phosphofructokinase AS54_RS24195 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AS54_RS24200 PF17848 Acetyl-coA carboxylase zinc finger domain AS54_RS24200 PF01039 Carboxyl transferase domain AS54_RS24205 PF00392 Bacterial regulatory proteins, gntR family AS54_RS24210 PF03949 Malic enzyme, NAD binding domain AS54_RS24210 PF00390 Malic enzyme, N-terminal domain AS54_RS24215 PF02811 PHP domain AS54_RS24215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS54_RS24215 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS54_RS24215 PF01336 OB-fold nucleic acid binding domain AS54_RS24215 PF14579 Helix-hairpin-helix motif AS54_RS24220 PF14034 Sporulation protein YtrH AS54_RS24230 PF01368 DHH family AS54_RS24230 PF02272 DHHA1 domain AS54_RS24235 PF14007 YtpI-like protein AS54_RS24250 PF07085 DRTGG domain AS54_RS24250 PF03061 Thioesterase superfamily AS54_RS24250 PF00571 CBS domain AS54_RS24250 PF00392 Bacterial regulatory proteins, gntR family AS54_RS24265 PF00557 Metallopeptidase family M24 AS54_RS24265 PF01321 Creatinase/Prolidase N-terminal domain AS54_RS24295 PF04542 Sigma-70 region 2 AS54_RS24295 PF08281 Sigma-70, region 4 AS54_RS24320 PF01381 Helix-turn-helix AS54_RS24330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS54_RS24330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS54_RS24340 PF00582 Universal stress protein family AS54_RS24360 PF14698 Argininosuccinate lyase C-terminal AS54_RS24360 PF00206 Lyase AS54_RS24365 PF00764 Arginosuccinate synthase AS54_RS24380 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS54_RS24380 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS24385 PF12787 EcsC protein family AS54_RS24395 PF00871 Acetokinase family AS54_RS24400 PF02384 N-6 DNA Methylase AS54_RS24405 PF08534 Redoxin AS54_RS24410 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AS54_RS24420 PF01513 ATP-NAD kinase AS54_RS24425 PF07969 Amidohydrolase family AS54_RS24435 PF00501 AMP-binding enzyme AS54_RS24435 PF13193 AMP-binding enzyme C-terminal domain AS54_RS24440 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS54_RS24445 PF02926 THUMP domain AS54_RS24445 PF02568 Thiamine biosynthesis protein (ThiI) AS54_RS24450 PF00266 Aminotransferase class-V AS54_RS24455 PF06160 Septation ring formation regulator, EzrA AS54_RS24460 PF03466 LysR substrate binding domain AS54_RS24460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS24470 PF00440 Bacterial regulatory proteins, tetR family AS54_RS24475 PF13185 GAF domain AS54_RS24480 PF01053 Cys/Met metabolism PLP-dependent enzyme AS54_RS24485 PF00163 Ribosomal protein S4/S9 N-terminal domain AS54_RS24485 PF01479 S4 domain AS54_RS24525 PF01479 S4 domain AS54_RS24525 PF00579 tRNA synthetases class I (W and Y) AS54_RS24535 PF13193 AMP-binding enzyme C-terminal domain AS54_RS24535 PF00501 AMP-binding enzyme AS54_RS24540 PF00583 Acetyltransferase (GNAT) family AS54_RS24545 PF00571 CBS domain AS54_RS24550 PF00850 Histone deacetylase domain AS54_RS24565 PF00072 Response regulator receiver domain AS54_RS24565 PF00486 Transcriptional regulatory protein, C terminal AS54_RS24570 PF13426 PAS domain AS54_RS24570 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS24570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS24570 PF00672 HAMP domain AS54_RS24575 PF12796 Ankyrin repeats (3 copies) AS54_RS24580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS54_RS24585 PF01741 Large-conductance mechanosensitive channel, MscL AS54_RS24610 PF00356 Bacterial regulatory proteins, lacI family AS54_RS24620 PF07537 CamS sex pheromone cAM373 precursor AS54_RS24625 PF11009 Protein of unknown function (DUF2847) AS54_RS24635 PF02073 Thermophilic metalloprotease (M29) AS54_RS24655 PF02687 FtsX-like permease family AS54_RS24660 PF00005 ABC transporter AS54_RS24670 PF13302 Acetyltransferase (GNAT) domain AS54_RS24675 PF03551 Transcriptional regulator PadR-like family AS54_RS24685 PF02875 Mur ligase family, glutamate ligase domain AS54_RS24685 PF08245 Mur ligase middle domain AS54_RS24685 PF01225 Mur ligase family, catalytic domain AS54_RS24695 PF01580 FtsK/SpoIIIE family AS54_RS24695 PF17854 FtsK alpha domain AS54_RS24695 PF09397 Ftsk gamma domain AS54_RS24705 PF14794 Domain of unknown function (DUF4479) AS54_RS24705 PF01588 Putative tRNA binding domain AS54_RS24710 PF07285 Protein of unknown function (DUF1444) AS54_RS24715 PF00085 Thioredoxin AS54_RS24720 PF01931 Protein of unknown function DUF84 AS54_RS24725 PF05343 M42 glutamyl aminopeptidase AS54_RS24735 PF00753 Metallo-beta-lactamase superfamily AS54_RS24740 PF02390 Putative methyltransferase AS54_RS24745 PF14165 YtzH-like protein AS54_RS24750 PF01636 Phosphotransferase enzyme family AS54_RS24755 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AS54_RS24755 PF17999 Pullulanase N1-terminal domain AS54_RS24755 PF00128 Alpha amylase, catalytic domain AS54_RS24765 PF02834 LigT like Phosphoesterase AS54_RS24770 PF01546 Peptidase family M20/M25/M40 AS54_RS24775 PF08220 DeoR-like helix-turn-helix domain AS54_RS24780 PF01479 S4 domain AS54_RS24780 PF00849 RNA pseudouridylate synthase AS54_RS24785 PF14667 Polysaccharide biosynthesis C-terminal domain AS54_RS24785 PF01943 Polysaccharide biosynthesis protein AS54_RS24795 PF07690 Major Facilitator Superfamily AS54_RS24800 PF01022 Bacterial regulatory protein, arsR family AS54_RS24805 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AS54_RS24815 PF10957 Sporulation protein Cse60 AS54_RS24825 PF02559 CarD-like/TRCF domain AS54_RS24835 PF06800 Sugar transport protein AS54_RS24850 PF02391 MoaE protein AS54_RS24855 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AS54_RS24860 PF03454 MoeA C-terminal region (domain IV) AS54_RS24860 PF00994 Probable molybdopterin binding domain AS54_RS24860 PF03453 MoeA N-terminal region (domain I and II) AS54_RS24865 PF01967 MoaC family AS54_RS24870 PF00899 ThiF family AS54_RS24875 PF04055 Radical SAM superfamily AS54_RS24875 PF06463 Molybdenum Cofactor Synthesis C AS54_RS24895 PF00581 Rhodanese-like domain AS54_RS24905 PF00561 alpha/beta hydrolase fold AS54_RS24910 PF03323 Bacillus/Clostridium GerA spore germination protein AS54_RS24915 PF03845 Spore germination protein AS54_RS24945 PF09334 tRNA synthetases class I (M) AS54_RS24945 PF13603 Leucyl-tRNA synthetase, Domain 2 AS54_RS24945 PF00133 tRNA synthetases class I (I, L, M and V) AS54_RS24945 PF08264 Anticodon-binding domain of tRNA AS54_RS24950 PF07690 Major Facilitator Superfamily AS54_RS24955 PF00999 Sodium/hydrogen exchanger family AS54_RS24960 PF02080 TrkA-C domain AS54_RS24965 PF00589 Phage integrase family AS54_RS24975 PF00005 ABC transporter AS54_RS24980 PF04235 Protein of unknown function (DUF418) AS54_RS24980 PF07786 Protein of unknown function (DUF1624) AS54_RS24995 PF16199 Radical_SAM C-terminal domain AS54_RS24995 PF04055 Radical SAM superfamily AS54_RS25000 PF06962 Putative rRNA methylase AS54_RS25005 PF00005 ABC transporter AS54_RS25015 PF01177 Asp/Glu/Hydantoin racemase AS54_RS25030 PF10776 Protein of unknown function (DUF2600) AS54_RS25035 PF12146 Serine aminopeptidase, S33 AS54_RS25040 PF00132 Bacterial transferase hexapeptide (six repeats) AS54_RS25045 PF01569 PAP2 superfamily AS54_RS25050 PF00534 Glycosyl transferases group 1 AS54_RS25050 PF13439 Glycosyltransferase Family 4 AS54_RS25055 PF12804 MobA-like NTP transferase domain AS54_RS25060 PF00994 Probable molybdopterin binding domain AS54_RS25075 PF02773 S-adenosylmethionine synthetase, C-terminal domain AS54_RS25075 PF00438 S-adenosylmethionine synthetase, N-terminal domain AS54_RS25075 PF02772 S-adenosylmethionine synthetase, central domain AS54_RS25080 PF01293 Phosphoenolpyruvate carboxykinase AS54_RS25115 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS25120 PF08220 DeoR-like helix-turn-helix domain AS54_RS25120 PF00455 DeoR C terminal sensor domain AS54_RS25125 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS25130 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS25130 PF13188 PAS domain AS54_RS25130 PF00989 PAS fold AS54_RS25130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS25130 PF13426 PAS domain AS54_RS25135 PF08447 PAS fold AS54_RS25135 PF00989 PAS fold AS54_RS25135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS25135 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS25140 PF08386 TAP-like protein AS54_RS25140 PF00561 alpha/beta hydrolase fold AS54_RS25145 PF00884 Sulfatase AS54_RS25165 PF00005 ABC transporter AS54_RS25170 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS25185 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS25195 PF00293 NUDIX domain AS54_RS25215 PF02664 S-Ribosylhomocysteinase (LuxS) AS54_RS25220 PF01809 Putative membrane protein insertion efficiency factor AS54_RS25225 PF00484 Carbonic anhydrase AS54_RS25230 PF01654 Cytochrome bd terminal oxidase subunit I AS54_RS25235 PF02322 Cytochrome bd terminal oxidase subunit II AS54_RS25240 PF10676 Spore germination protein gerPA/gerPF AS54_RS25255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS25255 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS54_RS25280 PF04012 PspA/IM30 family AS54_RS25310 PF00082 Subtilase family AS54_RS25310 PF05922 Peptidase inhibitor I9 AS54_RS25340 PF02421 Ferrous iron transport protein B AS54_RS25340 PF17910 FeoB cytosolic helical domain AS54_RS25340 PF07670 Nucleoside recognition AS54_RS25340 PF07664 Ferrous iron transport protein B C terminus AS54_RS25350 PF09515 Thiamine transporter protein (Thia_YuaJ) AS54_RS25355 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS25355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS25355 PF00672 HAMP domain AS54_RS25360 PF00072 Response regulator receiver domain AS54_RS25360 PF00486 Transcriptional regulatory protein, C terminal AS54_RS25385 PF00156 Phosphoribosyl transferase domain AS54_RS25390 PF00781 Diacylglycerol kinase catalytic domain AS54_RS25400 PF07282 Putative transposase DNA-binding domain AS54_RS25400 PF01385 Probable transposase AS54_RS25400 PF12323 Helix-turn-helix domain AS54_RS25420 PF09335 SNARE associated Golgi protein AS54_RS25425 PF00398 Ribosomal RNA adenine dimethylase AS54_RS25430 PF12833 Helix-turn-helix domain AS54_RS25430 PF02311 AraC-like ligand binding domain AS54_RS25440 PF02687 FtsX-like permease family AS54_RS25445 PF00005 ABC transporter AS54_RS25450 PF06445 GyrI-like small molecule binding domain AS54_RS25450 PF12833 Helix-turn-helix domain AS54_RS25455 PF00072 Response regulator receiver domain AS54_RS25455 PF00486 Transcriptional regulatory protein, C terminal AS54_RS25460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS25465 PF02687 FtsX-like permease family AS54_RS25470 PF02687 FtsX-like permease family AS54_RS25475 PF00005 ABC transporter AS54_RS25480 PF02687 FtsX-like permease family AS54_RS25490 PF02447 GntP family permease AS54_RS25495 PF00392 Bacterial regulatory proteins, gntR family AS54_RS25495 PF07702 UTRA domain AS54_RS25505 PF07071 KDGP aldolase AS54_RS25510 PF03841 L-seryl-tRNA selenium transferase AS54_RS25515 PF01979 Amidohydrolase family AS54_RS25520 PF02557 D-alanyl-D-alanine carboxypeptidase AS54_RS25525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS25525 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS25530 PF00072 Response regulator receiver domain AS54_RS25530 PF00486 Transcriptional regulatory protein, C terminal AS54_RS25535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AS54_RS25535 PF13378 Enolase C-terminal domain-like AS54_RS25540 PF00501 AMP-binding enzyme AS54_RS25540 PF13193 AMP-binding enzyme C-terminal domain AS54_RS25545 PF00378 Enoyl-CoA hydratase/isomerase AS54_RS25550 PF12697 Alpha/beta hydrolase family AS54_RS25555 PF16582 Middle domain of thiamine pyrophosphate AS54_RS25555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS54_RS25555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS54_RS25560 PF00425 chorismate binding enzyme AS54_RS25565 PF01040 UbiA prenyltransferase family AS54_RS25570 PF01258 Prokaryotic dksA/traR C4-type zinc finger AS54_RS25575 PF00313 'Cold-shock' DNA-binding domain AS54_RS25595 PF00343 Carbohydrate phosphorylase AS54_RS25600 PF00534 Glycosyl transferases group 1 AS54_RS25600 PF08323 Starch synthase catalytic domain AS54_RS25605 PF00483 Nucleotidyl transferase AS54_RS25610 PF00483 Nucleotidyl transferase AS54_RS25615 PF02806 Alpha amylase, C-terminal all-beta domain AS54_RS25615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AS54_RS25615 PF00128 Alpha amylase, catalytic domain AS54_RS25625 PF05922 Peptidase inhibitor I9 AS54_RS25625 PF13860 FlgD Ig-like domain AS54_RS25625 PF02225 PA domain AS54_RS25625 PF00082 Subtilase family AS54_RS25630 PF00056 lactate/malate dehydrogenase, NAD binding domain AS54_RS25630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS54_RS25725 PF05697 Bacterial trigger factor protein (TF) AS54_RS25725 PF05698 Bacterial trigger factor protein (TF) C-terminus AS54_RS25760 PF02308 MgtC family AS54_RS25765 PF07885 Ion channel AS54_RS25765 PF02254 TrkA-N domain AS54_RS25770 PF08868 YugN-like family AS54_RS25775 PF00342 Phosphoglucose isomerase AS54_RS25785 PF04070 Domain of unknown function (DUF378) AS54_RS25790 PF00575 S1 RNA binding domain AS54_RS25795 PF00155 Aminotransferase class I and II AS54_RS25800 PF01037 Lrp/AsnC ligand binding domain AS54_RS25805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS54_RS25805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS54_RS25810 PF08386 TAP-like protein AS54_RS25810 PF00561 alpha/beta hydrolase fold AS54_RS25835 PF08810 Kinase associated protein B AS54_RS25840 PF00929 Exonuclease AS54_RS25845 PF03600 Citrate transporter AS54_RS25860 PF03129 Anticodon binding domain AS54_RS25860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS54_RS25865 PF03061 Thioesterase superfamily AS54_RS25875 PF02632 BioY family AS54_RS25880 PF00483 Nucleotidyl transferase AS54_RS25885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS54_RS25885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS54_RS25885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS54_RS25885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS54_RS25890 PF02457 DisA bacterial checkpoint controller nucleotide-binding AS54_RS25890 PF10372 Bacterial membrane-spanning protein N-terminus AS54_RS25895 PF02789 Cytosol aminopeptidase family, N-terminal domain AS54_RS25895 PF00883 Cytosol aminopeptidase family, catalytic domain AS54_RS25900 PF06725 3D domain AS54_RS25910 PF13344 Haloacid dehalogenase-like hydrolase AS54_RS25910 PF00293 NUDIX domain AS54_RS25915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS25920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS25945 PF04463 Protein of unknown function (DUF523) AS54_RS25955 PF01521 Iron-sulphur cluster biosynthesis AS54_RS25960 PF01678 Diaminopimelate epimerase AS54_RS25965 PF07293 Protein of unknown function (DUF1450) AS54_RS25970 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS25980 PF00005 ABC transporter AS54_RS25980 PF09383 NIL domain AS54_RS25985 PF03649 Uncharacterised protein family (UPF0014) AS54_RS25990 PF03831 PhnA domain AS54_RS25990 PF08274 PhnA Zinc-Ribbon AS54_RS26005 PF01909 Nucleotidyltransferase domain AS54_RS26005 PF13427 Domain of unknown function (DUF4111) AS54_RS26010 PF07315 Protein of unknown function (DUF1462) AS54_RS26015 PF01106 NifU-like domain AS54_RS26030 PF04608 Phosphatidylglycerophosphatase A AS54_RS26050 PF12704 MacB-like periplasmic core domain AS54_RS26050 PF02687 FtsX-like permease family AS54_RS26050 PF00005 ABC transporter AS54_RS26055 PF02525 Flavodoxin-like fold AS54_RS26060 PF13344 Haloacid dehalogenase-like hydrolase AS54_RS26070 PF01934 Protein of unknown function DUF86 AS54_RS26075 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AS54_RS26095 PF06265 Protein of unknown function (DUF1027) AS54_RS26100 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AS54_RS26105 PF13411 MerR HTH family regulatory protein AS54_RS26105 PF07739 TipAS antibiotic-recognition domain AS54_RS26110 PF10086 YhfC intramembrane metalloprotease AS54_RS26130 PF04055 Radical SAM superfamily AS54_RS26130 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AS54_RS26135 PF01551 Peptidase family M23 AS54_RS26145 PF08827 Domain of unknown function (DUF1805) AS54_RS26150 PF02872 5'-nucleotidase, C-terminal domain AS54_RS26160 PF03551 Transcriptional regulator PadR-like family AS54_RS26165 PF04892 VanZ like family AS54_RS26170 PF01458 Uncharacterized protein family (UPF0051) AS54_RS26175 PF01592 NifU-like N terminal domain AS54_RS26180 PF00266 Aminotransferase class-V AS54_RS26185 PF01458 Uncharacterized protein family (UPF0051) AS54_RS26190 PF00005 ABC transporter AS54_RS26195 PF03180 NLPA lipoprotein AS54_RS26200 PF03180 NLPA lipoprotein AS54_RS26205 PF00528 Binding-protein-dependent transport system inner membrane component AS54_RS26210 PF00005 ABC transporter AS54_RS26210 PF09383 NIL domain AS54_RS26220 PF00085 Thioredoxin AS54_RS26225 PF01751 Toprim domain AS54_RS26230 PF01597 Glycine cleavage H-protein AS54_RS26235 PF03960 ArsC family AS54_RS26285 PF00056 lactate/malate dehydrogenase, NAD binding domain AS54_RS26285 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS54_RS26310 PF01381 Helix-turn-helix AS54_RS26310 PF08671 Anti-repressor SinI AS54_RS26315 PF00440 Bacterial regulatory proteins, tetR family AS54_RS26315 PF13305 Tetracyclin repressor-like, C-terminal domain AS54_RS26320 PF00753 Metallo-beta-lactamase superfamily AS54_RS26335 PF00005 ABC transporter AS54_RS26360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS54_RS26360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS54_RS26360 PF02770 Acyl-CoA dehydrogenase, middle domain AS54_RS26365 PF02803 Thiolase, C-terminal domain AS54_RS26365 PF00108 Thiolase, N-terminal domain AS54_RS26370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS54_RS26370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS54_RS26370 PF00378 Enoyl-CoA hydratase/isomerase AS54_RS26375 PF14115 YuzL-like protein AS54_RS26380 PF07943 Penicillin-binding protein 5, C-terminal domain AS54_RS26380 PF00768 D-alanyl-D-alanine carboxypeptidase AS54_RS26385 PF01619 Proline dehydrogenase AS54_RS26390 PF10835 Protein of unknown function (DUF2573) AS54_RS26395 PF01910 Thiamine-binding protein AS54_RS26400 PF02743 Cache domain AS54_RS26400 PF00672 HAMP domain AS54_RS26400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS26420 PF07690 Major Facilitator Superfamily AS54_RS26425 PF13520 Amino acid permease AS54_RS26440 PF02096 60Kd inner membrane protein AS54_RS26450 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS54_RS26450 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS54_RS26485 PF09335 SNARE associated Golgi protein AS54_RS26495 PF03734 L,D-transpeptidase catalytic domain AS54_RS26495 PF17969 L,D-transpeptidase C-terminal domain AS54_RS26500 PF00072 Response regulator receiver domain AS54_RS26500 PF00486 Transcriptional regulatory protein, C terminal AS54_RS26505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS26505 PF00989 PAS fold AS54_RS26505 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS26505 PF16736 Single Cache-like AS54_RS26515 PF09334 tRNA synthetases class I (M) AS54_RS26515 PF08264 Anticodon-binding domain of tRNA AS54_RS26525 PF02743 Cache domain AS54_RS26525 PF00672 HAMP domain AS54_RS26525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS26530 PF02743 Cache domain AS54_RS26530 PF00672 HAMP domain AS54_RS26530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS26535 PF01883 Iron-sulfur cluster assembly protein AS54_RS26540 PF07504 Fungalysin/Thermolysin Propeptide Motif AS54_RS26540 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS54_RS26540 PF03413 Peptidase propeptide and YPEB domain AS54_RS26540 PF01447 Thermolysin metallopeptidase, catalytic domain AS54_RS26545 PF17954 Quercetinase C-terminal cupin domain AS54_RS26545 PF02678 Pirin AS54_RS26550 PF01047 MarR family AS54_RS26560 PF00999 Sodium/hydrogen exchanger family AS54_RS26565 PF02080 TrkA-C domain AS54_RS26575 PF01235 Sodium:alanine symporter family AS54_RS26580 PF00210 Ferritin-like domain AS54_RS26595 PF03641 Possible lysine decarboxylase AS54_RS26605 PF00210 Ferritin-like domain AS54_RS26615 PF01773 Na+ dependent nucleoside transporter N-terminus AS54_RS26615 PF07662 Na+ dependent nucleoside transporter C-terminus AS54_RS26625 PF01235 Sodium:alanine symporter family AS54_RS26630 PF01235 Sodium:alanine symporter family AS54_RS26635 PF13460 NAD(P)H-binding AS54_RS26650 PF00248 Aldo/keto reductase family AS54_RS26655 PF07690 Major Facilitator Superfamily AS54_RS26660 PF01638 HxlR-like helix-turn-helix AS54_RS26665 PF07849 Protein of unknown function (DUF1641) AS54_RS26670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS26675 PF00579 tRNA synthetases class I (W and Y) AS54_RS26675 PF01479 S4 domain AS54_RS26680 PF01565 FAD binding domain AS54_RS26680 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AS54_RS26690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS54_RS26690 PF17202 Single cache domain 3 AS54_RS26690 PF00672 HAMP domain AS54_RS26700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AS54_RS26705 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AS54_RS26720 PF07690 Major Facilitator Superfamily AS54_RS26725 PF00005 ABC transporter AS54_RS26725 PF12848 ABC transporter AS54_RS26730 PF13302 Acetyltransferase (GNAT) domain AS54_RS26735 PF06146 Phosphate-starvation-inducible E AS54_RS26745 PF00005 ABC transporter AS54_RS26750 PF01032 FecCD transport family AS54_RS26755 PF01032 FecCD transport family AS54_RS26765 PF00486 Transcriptional regulatory protein, C terminal AS54_RS26765 PF00072 Response regulator receiver domain AS54_RS26770 PF01668 SmpB protein AS54_RS26780 PF17876 Cold shock domain AS54_RS26780 PF08206 Ribonuclease B OB domain AS54_RS26780 PF00773 RNB domain AS54_RS26780 PF00575 S1 RNA binding domain AS54_RS26785 PF12146 Serine aminopeptidase, S33 AS54_RS26790 PF03840 Preprotein translocase SecG subunit AS54_RS26800 PF03788 LrgA family AS54_RS26805 PF01156 Inosine-uridine preferring nucleoside hydrolase AS54_RS26810 PF00113 Enolase, C-terminal TIM barrel domain AS54_RS26810 PF03952 Enolase, N-terminal domain AS54_RS26815 PF01676 Metalloenzyme superfamily AS54_RS26815 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AS54_RS26820 PF00121 Triosephosphate isomerase AS54_RS26825 PF00162 Phosphoglycerate kinase AS54_RS26830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS54_RS26830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS54_RS26835 PF04198 Putative sugar-binding domain AS54_RS26845 PF00309 Sigma-54 factor, Activator interacting domain (AID) AS54_RS26845 PF04963 Sigma-54 factor, core binding domain AS54_RS26845 PF04552 Sigma-54, DNA binding domain AS54_RS26900 PF00239 Resolvase, N terminal domain AS54_RS26900 PF02796 Helix-turn-helix domain of resolvase AS54_RS26935 PF00589 Phage integrase family AS54_RS26935 PF02899 Phage integrase, N-terminal SAM-like domain AS54_RS26950 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AS54_RS26955 PF07451 Stage V sporulation protein AD (SpoVAD) AS54_RS26960 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AS54_RS26970 PF04239 Protein of unknown function (DUF421) AS54_RS26975 PF00574 Clp protease AS54_RS26980 PF00381 PTS HPr component phosphorylation site AS54_RS26985 PF14527 WhiA LAGLIDADG-like domain AS54_RS26985 PF02650 WhiA C-terminal HTH domain AS54_RS26985 PF10298 WhiA N-terminal LAGLIDADG-like domain AS54_RS26990 PF01933 Uncharacterised protein family UPF0052 AS54_RS26995 PF03668 P-loop ATPase protein family AS54_RS27000 PF00293 NUDIX domain AS54_RS27010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS54_RS27020 PF14602 Hexapeptide repeat of succinyl-transferase AS54_RS27025 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS27030 PF01790 Prolipoprotein diacylglyceryl transferase AS54_RS27035 PF07475 HPr Serine kinase C-terminal domain AS54_RS27035 PF02603 HPr Serine kinase N terminus AS54_RS27040 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AS54_RS27050 PF00005 ABC transporter AS54_RS27050 PF17760 UvrA interaction domain AS54_RS27050 PF17755 UvrA DNA-binding domain AS54_RS27055 PF12344 Ultra-violet resistance protein B AS54_RS27055 PF02151 UvrB/uvrC motif AS54_RS27055 PF17757 UvrB interaction domain AS54_RS27055 PF04851 Type III restriction enzyme, res subunit AS54_RS27055 PF00271 Helicase conserved C-terminal domain AS54_RS27070 PF13411 MerR HTH family regulatory protein AS54_RS27070 PF07739 TipAS antibiotic-recognition domain AS54_RS27095 PF03601 Conserved hypothetical protein 698 AS54_RS27100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS27100 PF03466 LysR substrate binding domain AS54_RS27105 PF00376 MerR family regulatory protein AS54_RS27105 PF09278 MerR, DNA binding AS54_RS27110 PF03358 NADPH-dependent FMN reductase AS54_RS27115 PF00005 ABC transporter AS54_RS27115 PF16326 ABC transporter C-terminal domain AS54_RS27115 PF12848 ABC transporter AS54_RS27120 PF01906 Putative heavy-metal-binding AS54_RS27125 PF00664 ABC transporter transmembrane region AS54_RS27125 PF00005 ABC transporter AS54_RS27130 PF17820 PDZ domain AS54_RS27135 PF17820 PDZ domain AS54_RS27135 PF03572 Peptidase family S41 AS54_RS27135 PF01471 Putative peptidoglycan binding domain AS54_RS27140 PF18075 FtsX extracellular domain AS54_RS27140 PF02687 FtsX-like permease family AS54_RS27145 PF00005 ABC transporter AS54_RS27150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS54_RS27160 PF00472 RF-1 domain AS54_RS27160 PF03462 PCRF domain AS54_RS27165 PF01043 SecA preprotein cross-linking domain AS54_RS27165 PF07517 SecA DEAD-like domain AS54_RS27165 PF02810 SEC-C motif AS54_RS27165 PF07516 SecA Wing and Scaffold domain AS54_RS27170 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AS54_RS27170 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AS54_RS27175 PF00313 'Cold-shock' DNA-binding domain AS54_RS27185 PF04851 Type III restriction enzyme, res subunit AS54_RS27185 PF00271 Helicase conserved C-terminal domain AS54_RS27190 PF01476 LysM domain AS54_RS27190 PF00877 NlpC/P60 family AS54_RS27195 PF01638 HxlR-like helix-turn-helix AS54_RS27205 PF02645 Uncharacterised protein, DegV family COG1307 AS54_RS27210 PF01205 Uncharacterized protein family UPF0029 AS54_RS27210 PF09186 Domain of unknown function (DUF1949) AS54_RS27215 PF03816 Cell envelope-related transcriptional attenuator domain AS54_RS27220 PF02350 UDP-N-acetylglucosamine 2-epimerase AS54_RS27225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS54_RS27225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS54_RS27225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS54_RS27230 PF00953 Glycosyl transferase family 4 AS54_RS27235 PF01522 Polysaccharide deacetylase AS54_RS27240 PF00158 Sigma-54 interaction domain AS54_RS27240 PF00874 PRD domain AS54_RS27240 PF03610 PTS system fructose IIA component AS54_RS27250 PF02417 Chromate transporter AS54_RS27255 PF04794 YdjC-like protein AS54_RS27260 PF02056 Family 4 glycosyl hydrolase AS54_RS27260 PF11975 Family 4 glycosyl hydrolase C-terminal domain AS54_RS27265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AS54_RS27270 PF02378 Phosphotransferase system, EIIC AS54_RS27275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS54_RS27285 PF02675 S-adenosylmethionine decarboxylase AS54_RS27300 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AS54_RS27305 PF02378 Phosphotransferase system, EIIC AS54_RS27310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS54_RS27315 PF00375 Sodium:dicarboxylate symporter family AS54_RS27325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS54_RS27350 PF03466 LysR substrate binding domain AS54_RS27350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS54_RS27365 PF01654 Cytochrome bd terminal oxidase subunit I AS54_RS27370 PF02322 Cytochrome bd terminal oxidase subunit II AS54_RS27375 PF02040 Arsenical pump membrane protein AS54_RS27380 PF13667 ThiC-associated domain AS54_RS27380 PF01964 Radical SAM ThiC family AS54_RS27385 PF02652 L-lactate permease AS54_RS27390 PF01385 Probable transposase AS54_RS27390 PF07282 Putative transposase DNA-binding domain AS54_RS27390 PF12323 Helix-turn-helix domain AS54_RS27400 PF09988 Uncharacterized metal-binding protein (DUF2227) AS54_RS27410 PF00884 Sulfatase AS54_RS27415 PF01063 Amino-transferase class IV AS54_RS27420 PF00877 NlpC/P60 family AS54_RS27420 PF01476 LysM domain AS54_RS27425 PF01773 Na+ dependent nucleoside transporter N-terminus AS54_RS27425 PF07662 Na+ dependent nucleoside transporter C-terminus AS54_RS27445 PF02028 BCCT, betaine/carnitine/choline family transporter AS54_RS27450 PF06725 3D domain AS54_RS27450 PF01476 LysM domain AS54_RS27475 PF04434 SWIM zinc finger AS54_RS27480 PF12419 SNF2 Helicase protein AS54_RS27480 PF00271 Helicase conserved C-terminal domain AS54_RS27480 PF00176 SNF2 family N-terminal domain AS54_RS27510 PF04545 Sigma-70, region 4 AS54_RS27510 PF04542 Sigma-70 region 2 AS54_RS27515 PF04893 Yip1 domain AS54_RS27520 PF04893 Yip1 domain AS54_RS27525 PF02687 FtsX-like permease family AS54_RS27525 PF12704 MacB-like periplasmic core domain AS54_RS27530 PF00005 ABC transporter AS54_RS27550 PF07690 Major Facilitator Superfamily AS54_RS27565 PF18719 ArlS sensor domain AS54_RS27565 PF00512 His Kinase A (phospho-acceptor) domain AS54_RS27565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS27570 PF00486 Transcriptional regulatory protein, C terminal AS54_RS27570 PF00072 Response regulator receiver domain AS54_RS27575 PF01238 Phosphomannose isomerase type I AS54_RS27580 PF02378 Phosphotransferase system, EIIC AS54_RS27580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS54_RS27580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS54_RS27585 PF08279 HTH domain AS54_RS27585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS54_RS27585 PF05043 Mga helix-turn-helix domain AS54_RS27585 PF00874 PRD domain AS54_RS27590 PF16363 GDP-mannose 4,6 dehydratase AS54_RS27600 PF03816 Cell envelope-related transcriptional attenuator domain AS54_RS27605 PF01238 Phosphomannose isomerase type I AS54_RS27610 PF01050 Mannose-6-phosphate isomerase AS54_RS27610 PF00483 Nucleotidyl transferase AS54_RS27615 PF00534 Glycosyl transferases group 1 AS54_RS27615 PF13439 Glycosyltransferase Family 4 AS54_RS27620 PF13439 Glycosyltransferase Family 4 AS54_RS27620 PF00534 Glycosyl transferases group 1 AS54_RS27625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS54_RS27625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS54_RS27625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS54_RS27635 PF13439 Glycosyltransferase Family 4 AS54_RS27635 PF00534 Glycosyl transferases group 1 AS54_RS27640 PF01943 Polysaccharide biosynthesis protein AS54_RS27645 PF02397 Bacterial sugar transferase AS54_RS27650 PF00483 Nucleotidyl transferase AS54_RS27660 PF13614 AAA domain AS54_RS27665 PF02706 Chain length determinant protein AS54_RS27665 PF13807 G-rich domain on putative tyrosine kinase AS54_RS27670 PF13614 AAA domain AS54_RS27675 PF07977 FabA-like domain AS54_RS27685 PF12116 Stage III sporulation protein D AS54_RS27695 PF01551 Peptidase family M23 AS54_RS27705 PF00005 ABC transporter AS54_RS27710 PF00072 Response regulator receiver domain AS54_RS27710 PF04397 LytTr DNA-binding domain AS54_RS27715 PF08486 Stage II sporulation protein AS54_RS27720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS54_RS27730 PF06612 Protein of unknown function (DUF1146) AS54_RS27735 PF00361 Proton-conducting membrane transporter AS54_RS27740 PF00361 Proton-conducting membrane transporter AS54_RS27745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AS54_RS27745 PF00361 Proton-conducting membrane transporter AS54_RS27745 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AS54_RS27750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AS54_RS27755 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AS54_RS27765 PF00146 NADH dehydrogenase AS54_RS27770 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AS54_RS27775 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AS54_RS27780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AS54_RS27785 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AS54_RS27790 PF03707 Bacterial signalling protein N terminal repeat AS54_RS27790 PF00990 Diguanylate cyclase, GGDEF domain AS54_RS27790 PF00563 EAL domain AS54_RS27805 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AS54_RS27805 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AS54_RS27810 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS54_RS27810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS54_RS27815 PF00231 ATP synthase AS54_RS27820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS54_RS27820 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS54_RS27820 PF00306 ATP synthase alpha/beta chain, C terminal domain AS54_RS27825 PF00213 ATP synthase delta (OSCP) subunit AS54_RS27830 PF00430 ATP synthase B/B' CF(0) AS54_RS27835 PF00137 ATP synthase subunit C AS54_RS27840 PF00119 ATP synthase A chain AS54_RS27845 PF03899 ATP synthase I chain AS54_RS27865 PF00464 Serine hydroxymethyltransferase AS54_RS27870 PF13333 Integrase core domain AS54_RS27870 PF13276 HTH-like domain AS54_RS27870 PF00665 Integrase core domain AS54_RS27880 PF04260 Protein of unknown function (DUF436) AS54_RS27885 PF02502 Ribose/Galactose Isomerase AS54_RS27890 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS54_RS27895 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS54_RS27900 PF07681 DoxX AS54_RS27905 PF01613 Flavin reductase like domain AS54_RS27920 PF02659 Putative manganese efflux pump AS54_RS27925 PF01300 Telomere recombination AS54_RS27925 PF03481 Putative GTP-binding controlling metal-binding AS54_RS27935 PF09551 Stage II sporulation protein R (spore_II_R) AS54_RS27940 PF17827 PrmC N-terminal domain AS54_RS27940 PF13847 Methyltransferase domain AS54_RS27945 PF03462 PCRF domain AS54_RS27945 PF00472 RF-1 domain AS54_RS27950 PF00265 Thymidine kinase AS54_RS27955 PF01197 Ribosomal protein L31 AS54_RS27960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS54_RS27960 PF07498 Rho termination factor, N-terminal domain AS54_RS27960 PF07497 Rho termination factor, RNA-binding domain AS54_RS27965 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AS54_RS27970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS54_RS27975 PF01116 Fructose-bisphosphate aldolase class-II AS54_RS27980 PF00072 Response regulator receiver domain AS54_RS27985 PF10740 Domain of unknown function (DUF2529) AS54_RS27990 PF00117 Glutamine amidotransferase class-I AS54_RS27990 PF06418 CTP synthase N-terminus AS54_RS27995 PF05066 HB1, ASXL, restriction endonuclease HTH domain AS54_RS28005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS54_RS28005 PF02770 Acyl-CoA dehydrogenase, middle domain AS54_RS28005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS54_RS28010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS54_RS28010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS54_RS28010 PF02770 Acyl-CoA dehydrogenase, middle domain AS54_RS28015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS54_RS28015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS54_RS28020 PF02803 Thiolase, C-terminal domain AS54_RS28020 PF00108 Thiolase, N-terminal domain AS54_RS28025 PF02754 Cysteine-rich domain AS54_RS28025 PF13183 4Fe-4S dicluster domain AS54_RS28030 PF13091 PLD-like domain AS54_RS28035 PF03851 UV-endonuclease UvdE AS54_RS28040 PF00563 EAL domain AS54_RS28040 PF00990 Diguanylate cyclase, GGDEF domain AS54_RS28040 PF03707 Bacterial signalling protein N terminal repeat AS54_RS28060 PF00072 Response regulator receiver domain AS54_RS28060 PF00196 Bacterial regulatory proteins, luxR family AS54_RS28065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS54_RS28065 PF07730 Histidine kinase AS54_RS28075 PF00005 ABC transporter AS54_RS28080 PF00557 Metallopeptidase family M24 AS54_RS28090 PF04389 Peptidase family M28 AS54_RS28090 PF02225 PA domain AS54_RS28110 PF04542 Sigma-70 region 2 AS54_RS28110 PF08281 Sigma-70, region 4 AS54_RS28115 PF05746 DALR anticodon binding domain AS54_RS28115 PF00750 tRNA synthetases class I (R) AS54_RS28115 PF03485 Arginyl tRNA synthetase N terminal domain AS54_RS28120 PF09148 Domain of unknown function (DUF1934) AS54_RS28125 PF02016 LD-carboxypeptidase N-terminal domain AS54_RS28125 PF17676 LD-carboxypeptidase C-terminal domain AS54_RS28145 PF00491 Arginase family AS54_RS28150 PF17284 Spermidine synthase tetramerisation domain AS54_RS28155 PF07690 Major Facilitator Superfamily AS54_RS28160 PF13411 MerR HTH family regulatory protein AS54_RS28165 PF03009 Glycerophosphoryl diester phosphodiesterase family AS54_RS28170 PF00912 Transglycosylase AS54_RS28170 PF00905 Penicillin binding protein transpeptidase domain AS54_RS28175 PF08741 YwhD family AS54_RS28180 PF02163 Peptidase family M50 AS54_RS28185 PF01361 Tautomerase enzyme AS54_RS28190 PF01966 HD domain AS54_RS28195 PF01497 Periplasmic binding protein AS54_RS28200 PF00005 ABC transporter AS54_RS28205 PF01032 FecCD transport family AS54_RS28210 PF01032 FecCD transport family AS54_RS28215 PF07293 Protein of unknown function (DUF1450) AS54_RS28230 PF03099 Biotin/lipoate A/B protein ligase family AS54_RS28235 PF01515 Phosphate acetyl/butaryl transferase AS54_RS28240 PF06778 Chlorite dismutase AS54_RS28245 PF07943 Penicillin-binding protein 5, C-terminal domain AS54_RS28245 PF00768 D-alanyl-D-alanine carboxypeptidase AS54_RS28250 PF07486 Cell Wall Hydrolase AS54_RS28255 PF09671 Spore coat protein (Spore_GerQ) AS54_RS28260 PF04241 Protein of unknown function (DUF423) AS54_RS28270 PF07885 Ion channel AS54_RS28270 PF02254 TrkA-N domain AS54_RS28275 PF00860 Permease family AS54_RS28285 PF12823 Domain of unknown function (DUF3817) AS54_RS28290 PF03167 Uracil DNA glycosylase superfamily AS54_RS28295 PF12679 ABC-2 family transporter protein AS54_RS28300 PF00005 ABC transporter AS54_RS28305 PF13472 GDSL-like Lipase/Acylhydrolase family AS54_RS28310 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS54_RS28310 PF00356 Bacterial regulatory proteins, lacI family AS54_RS28320 PF03447 Homoserine dehydrogenase, NAD binding domain AS54_RS28320 PF01842 ACT domain AS54_RS28320 PF00742 Homoserine dehydrogenase AS54_RS28325 PF04204 Homoserine O-succinyltransferase AS54_RS28330 PF01053 Cys/Met metabolism PLP-dependent enzyme AS54_RS28335 PF13419 Haloacid dehalogenase-like hydrolase AS54_RS28340 PF00027 Cyclic nucleotide-binding domain AS54_RS28345 PF02525 Flavodoxin-like fold AS54_RS28350 PF00072 Response regulator receiver domain AS54_RS28350 PF00196 Bacterial regulatory proteins, luxR family AS54_RS28355 PF13185 GAF domain AS54_RS28355 PF07730 Histidine kinase AS54_RS28360 PF08543 Phosphomethylpyrimidine kinase AS54_RS28365 PF00990 Diguanylate cyclase, GGDEF domain AS54_RS28365 PF07694 5TMR of 5TMR-LYT AS54_RS28370 PF04328 Selenoprotein, putative AS54_RS28375 PF02554 Carbon starvation protein CstA AS54_RS28375 PF13722 5TM C-terminal transporter carbon starvation CstA AS54_RS28380 PF00072 Response regulator receiver domain AS54_RS28380 PF04397 LytTr DNA-binding domain AS54_RS28385 PF07690 Major Facilitator Superfamily AS54_RS28390 PF03808 Glycosyl transferase WecB/TagA/CpsF family AS54_RS28415 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS54_RS28435 PF02733 Dak1 domain AS54_RS28445 PF01510 N-acetylmuramoyl-L-alanine amidase