AK40_RS01190 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS03755 SM00382 ATPases associated with a variety of cellular activities AK40_RS03780 SM00420 helix_turn_helix, Deoxyribose operon repressor AK40_RS03780 SM01134 AK40_RS03780 AK40_RS03790 SM00365 Leucine-rich repeat, SDS22-like subfamily AK40_RS03790 SM00369 Leucine-rich repeats, typical (most populated) subfamily AK40_RS03790 SM00725 NEAr Transporter domain AK40_RS03795 SM01007 Class II Aldolase and Adducin N-terminal domain AK40_RS03815 SM00387 Histidine kinase-like ATPases AK40_RS03815 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS03820 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS03840 SM00387 Histidine kinase-like ATPases AK40_RS03840 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS03915 SM00507 HNH nucleases AK40_RS03930 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS03935 SM00382 ATPases associated with a variety of cellular activities AK40_RS03945 SM00382 ATPases associated with a variety of cellular activities AK40_RS03965 SM00344 helix_turn_helix ASNC type AK40_RS04085 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS04160 SM00917 LeuA allosteric (dimerisation) domain AK40_RS04165 SM01329 AK40_RS04165 AK40_RS04350 SM00387 Histidine kinase-like ATPases AK40_RS04355 SM00421 helix_turn_helix, Lux Regulon AK40_RS04355 SM00448 cheY-homologous receiver domain AK40_RS04450 SM00091 PAS domain AK40_RS04450 SM00387 Histidine kinase-like ATPases AK40_RS04450 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS04470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS04470 SM00387 Histidine kinase-like ATPases AK40_RS04470 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS04520 SM00363 S4 RNA-binding domain AK40_RS04540 SM00448 cheY-homologous receiver domain AK40_RS04540 SM00862 Transcriptional regulatory protein, C terminal AK40_RS04545 SM00091 PAS domain AK40_RS04545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS04545 SM00387 Histidine kinase-like ATPases AK40_RS04545 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS04555 SM00257 Lysin motif AK40_RS04580 SM00487 DEAD-like helicases superfamily AK40_RS04580 SM00490 helicase superfamily c-terminal domain AK40_RS04590 SM00257 Lysin motif AK40_RS04600 SM00422 helix_turn_helix, mercury resistance AK40_RS04610 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AK40_RS04625 SM00644 AK40_RS04625 AK40_RS04635 SM00870 AK40_RS04635 AK40_RS04650 SM00316 Ribosomal protein S1-like RNA-binding domain AK40_RS04655 SM01240 AK40_RS04655 AK40_RS04710 SM00411 bacterial (prokaryotic) histone like domain AK40_RS04735 SM00562 AK40_RS04735 AK40_RS04755 SM00028 Tetratricopeptide repeats AK40_RS04760 SM00914 AK40_RS04760 AK40_RS04805 SM00986 Uracil DNA glycosylase superfamily AK40_RS04805 SM00987 UreE urease accessory protein, C-terminal domain AK40_RS04825 SM00851 MGS-like domain AK40_RS04875 SM00479 AK40_RS04875 AK40_RS04875 SM00491 AK40_RS04875 AK40_RS04900 SM00478 endonuclease III AK40_RS04900 SM00525 AK40_RS04900 AK40_RS04910 SM00060 Fibronectin type 3 domain AK40_RS04960 SM00981 AK40_RS04960 AK40_RS04970 SM00491 AK40_RS04970 AK40_RS05030 SM00450 Rhodanese Homology Domain AK40_RS05065 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AK40_RS05065 SM00475 5'-3' exonuclease AK40_RS05130 SM00357 Cold shock protein domain AK40_RS05200 SM00849 Metallo-beta-lactamase superfamily AK40_RS05205 SM00422 helix_turn_helix, mercury resistance AK40_RS05205 SM00871 Bacterial transcription activator, effector binding domain AK40_RS05295 SM00448 cheY-homologous receiver domain AK40_RS05300 SM00073 Histidine Phosphotransfer domain AK40_RS05300 SM00260 Two component signalling adaptor domain AK40_RS05300 SM00387 Histidine kinase-like ATPases AK40_RS05300 SM01231 AK40_RS05300 AK40_RS05320 SM00138 Methyltransferase, chemotaxis proteins AK40_RS05395 SM00382 ATPases associated with a variety of cellular activities AK40_RS05430 SM00260 Two component signalling adaptor domain AK40_RS05430 SM00448 cheY-homologous receiver domain AK40_RS05500 SM00382 ATPases associated with a variety of cellular activities AK40_RS05500 SM00962 SRP54-type protein, GTPase domain AK40_RS05510 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AK40_RS05555 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS05575 SM00382 ATPases associated with a variety of cellular activities AK40_RS05590 SM00849 Metallo-beta-lactamase superfamily AK40_RS05590 SM01027 Beta-Casp domain AK40_RS05610 SM00835 Cupin AK40_RS05625 SM00855 Phosphoglycerate mutase family AK40_RS05645 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS05685 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS05685 SM00895 AK40_RS05685 AK40_RS05695 SM00833 Cobalamin synthesis protein cobW C-terminal domain AK40_RS05780 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS05825 SM00421 helix_turn_helix, Lux Regulon AK40_RS05825 SM00448 cheY-homologous receiver domain AK40_RS05835 SM00382 ATPases associated with a variety of cellular activities AK40_RS05850 SM00155 Phospholipase D. Active site motifs. AK40_RS05870 SM00919 Malic enzyme, NAD binding domain AK40_RS05870 SM01274 AK40_RS05870 AK40_RS05875 SM00387 Histidine kinase-like ATPases AK40_RS05880 SM00448 cheY-homologous receiver domain AK40_RS05885 SM00487 DEAD-like helicases superfamily AK40_RS05885 SM00490 helicase superfamily c-terminal domain AK40_RS05910 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS05945 SM00646 AK40_RS05945 AK40_RS05950 SM00047 Lysozyme subfamily 2 AK40_RS06050 SM00422 helix_turn_helix, mercury resistance AK40_RS06115 SM00854 Bacterial capsule synthesis protein PGA_cap AK40_RS06155 SM00850 LytTr DNA-binding domain AK40_RS06185 SM00860 SMI1 / KNR4 family AK40_RS06220 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS06230 SM00448 cheY-homologous receiver domain AK40_RS06230 SM00862 Transcriptional regulatory protein, C terminal AK40_RS06235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS06235 SM00387 Histidine kinase-like ATPases AK40_RS06235 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS06255 SM00450 Rhodanese Homology Domain AK40_RS06300 SM00382 ATPases associated with a variety of cellular activities AK40_RS06320 SM00448 cheY-homologous receiver domain AK40_RS06320 SM00862 Transcriptional regulatory protein, C terminal AK40_RS06325 SM00387 Histidine kinase-like ATPases AK40_RS06325 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS06335 SM01133 AK40_RS06335 AK40_RS06345 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AK40_RS06375 SM01011 Aminopeptidase P, N-terminal domain AK40_RS06385 SM00287 Bacterial SH3 domain homologues AK40_RS06395 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AK40_RS06395 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AK40_RS06395 SM00493 AK40_RS06395 AK40_RS06490 SM00833 Cobalamin synthesis protein cobW C-terminal domain AK40_RS06525 SM00382 ATPases associated with a variety of cellular activities AK40_RS06530 SM00382 ATPases associated with a variety of cellular activities AK40_RS06565 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS06585 SM00382 ATPases associated with a variety of cellular activities AK40_RS06590 SM00382 ATPases associated with a variety of cellular activities AK40_RS06625 SM00287 Bacterial SH3 domain homologues AK40_RS06635 SM00382 ATPases associated with a variety of cellular activities AK40_RS06640 SM00448 cheY-homologous receiver domain AK40_RS06640 SM00862 Transcriptional regulatory protein, C terminal AK40_RS06645 SM00387 Histidine kinase-like ATPases AK40_RS06645 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS06725 SM00448 cheY-homologous receiver domain AK40_RS06725 SM00862 Transcriptional regulatory protein, C terminal AK40_RS06730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS06730 SM00387 Histidine kinase-like ATPases AK40_RS06730 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS06800 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS06825 SM00460 Transglutaminase/protease-like homologues AK40_RS06850 SM00966 SpoVT / AbrB like domain AK40_RS06860 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS06895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS06895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS06960 SM00833 Cobalamin synthesis protein cobW C-terminal domain AK40_RS07030 SM00855 Phosphoglycerate mutase family AK40_RS07080 SM00155 Phospholipase D. Active site motifs. AK40_RS07105 SM01091 Transporter associated domain AK40_RS07180 SM00244 prohibitin homologues AK40_RS07190 SM00346 helix_turn_helix isocitrate lyase regulation AK40_RS07225 SM00859 Semialdehyde dehydrogenase, NAD binding domain AK40_RS07245 SM00855 Phosphoglycerate mutase family AK40_RS07260 SM01005 Alanine racemase, C-terminal domain AK40_RS07290 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS07440 SM00487 DEAD-like helicases superfamily AK40_RS07440 SM00490 helicase superfamily c-terminal domain AK40_RS07460 SM00829 Enoylreductase AK40_RS07480 SM00849 Metallo-beta-lactamase superfamily AK40_RS07495 SM00460 Transglutaminase/protease-like homologues AK40_RS07520 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AK40_RS07540 SM00100 Cyclic nucleotide-monophosphate binding domain AK40_RS07540 SM00419 helix_turn_helix, cAMP Regulatory protein AK40_RS07545 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS07555 SM00852 Probable molybdopterin binding domain AK40_RS07615 SM00894 Excalibur calcium-binding domain AK40_RS07705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AK40_RS07710 SM00382 ATPases associated with a variety of cellular activities AK40_RS07740 SM00567 E-Z type HEAT repeats AK40_RS07740 SM00932 Scaffold protein Nfu/NifU N terminal AK40_RS07760 SM00836 DALR anticodon binding domain AK40_RS07760 SM01016 Arginyl tRNA synthetase N terminal dom AK40_RS07775 SM00028 Tetratricopeptide repeats AK40_RS07805 SM00327 von Willebrand factor (vWF) type A domain AK40_RS07820 SM00382 ATPases associated with a variety of cellular activities AK40_RS07830 SM00028 Tetratricopeptide repeats AK40_RS07860 SM00857 Resolvase, N terminal domain AK40_RS07945 SM00448 cheY-homologous receiver domain AK40_RS07945 SM00862 Transcriptional regulatory protein, C terminal AK40_RS07950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS07950 SM00387 Histidine kinase-like ATPases AK40_RS07950 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS08025 SM00382 ATPases associated with a variety of cellular activities AK40_RS08090 SM00563 Phosphate acyltransferases AK40_RS08150 SM00014 Acid phosphatase homologues AK40_RS08200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AK40_RS08205 SM00421 helix_turn_helix, Lux Regulon AK40_RS08205 SM00448 cheY-homologous receiver domain AK40_RS08215 SM00829 Enoylreductase AK40_RS08270 SM00382 ATPases associated with a variety of cellular activities AK40_RS08310 SM01091 Transporter associated domain AK40_RS08325 SM00387 Histidine kinase-like ATPases AK40_RS08325 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS08340 SM00882 Coenzyme A transferase AK40_RS08345 SM00882 Coenzyme A transferase AK40_RS08360 SM00382 ATPases associated with a variety of cellular activities AK40_RS08400 SM00219 Tyrosine kinase, catalytic domain AK40_RS08410 SM00014 Acid phosphatase homologues AK40_RS08465 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AK40_RS08640 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS08680 SM00823 Phosphopantetheine attachment site AK40_RS08680 SM00824 Thioesterase AK40_RS08685 SM00923 MbtH-like protein AK40_RS08705 SM00411 bacterial (prokaryotic) histone like domain AK40_RS08750 SM00363 S4 RNA-binding domain AK40_RS08755 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AK40_RS08765 SM00382 ATPases associated with a variety of cellular activities AK40_RS08820 SM00849 Metallo-beta-lactamase superfamily AK40_RS08850 SM00849 Metallo-beta-lactamase superfamily AK40_RS08870 SM01059 Chloramphenicol acetyltransferase AK40_RS08895 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS08940 SM00357 Cold shock protein domain AK40_RS08970 SM00859 Semialdehyde dehydrogenase, NAD binding domain AK40_RS09005 SM00382 ATPases associated with a variety of cellular activities AK40_RS09010 SM00382 ATPases associated with a variety of cellular activities AK40_RS09020 SM00646 AK40_RS09020 AK40_RS09030 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS09055 SM00835 Cupin AK40_RS09060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AK40_RS09130 SM01207 AK40_RS09130 AK40_RS09175 SM00849 Metallo-beta-lactamase superfamily AK40_RS09190 SM00487 DEAD-like helicases superfamily AK40_RS09190 SM00490 helicase superfamily c-terminal domain AK40_RS09220 SM00382 ATPases associated with a variety of cellular activities AK40_RS09275 SM00110 Complement component C1q domain. AK40_RS09325 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS09330 SM00855 Phosphoglycerate mutase family AK40_RS09425 SM00354 helix_turn _helix lactose operon repressor AK40_RS09500 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS09525 SM00646 AK40_RS09525 AK40_RS09540 SM00382 ATPases associated with a variety of cellular activities AK40_RS09545 SM00052 Putative diguanylate phosphodiesterase AK40_RS09545 SM00091 PAS domain AK40_RS09545 SM00267 diguanylate cyclase AK40_RS09555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS09555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS09555 SM00319 Homologues of the ligand binding domain of Tar AK40_RS09575 SM00450 Rhodanese Homology Domain AK40_RS09575 SM00849 Metallo-beta-lactamase superfamily AK40_RS09605 SM00878 Biotin carboxylase C-terminal domain AK40_RS09665 SM00387 Histidine kinase-like ATPases AK40_RS09665 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS09670 SM00448 cheY-homologous receiver domain AK40_RS09670 SM00862 Transcriptional regulatory protein, C terminal AK40_RS09725 SM00382 ATPases associated with a variety of cellular activities AK40_RS09745 SM00422 helix_turn_helix, mercury resistance AK40_RS09745 SM00871 Bacterial transcription activator, effector binding domain AK40_RS09780 SM00342 helix_turn_helix, arabinose operon control protein AK40_RS09795 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS09860 SM00448 cheY-homologous receiver domain AK40_RS09860 SM00862 Transcriptional regulatory protein, C terminal AK40_RS09865 SM00387 Histidine kinase-like ATPases AK40_RS09875 SM00382 ATPases associated with a variety of cellular activities AK40_RS09890 SM00382 ATPases associated with a variety of cellular activities AK40_RS09920 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS09925 SM01209 AK40_RS09925 AK40_RS10060 SM00091 PAS domain AK40_RS10060 SM00387 Histidine kinase-like ATPases AK40_RS10060 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS10085 SM00382 ATPases associated with a variety of cellular activities AK40_RS10095 SM00387 Histidine kinase-like ATPases AK40_RS10095 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS10110 SM00829 Enoylreductase AK40_RS10115 SM00014 Acid phosphatase homologues AK40_RS10120 SM00740 AK40_RS10120 AK40_RS10195 SM00422 helix_turn_helix, mercury resistance AK40_RS10235 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS10285 SM00480 DNA polymerase III beta subunit AK40_RS10315 SM00855 Phosphoglycerate mutase family AK40_RS10390 SM00465 GIY-YIG type nucleases (URI domain) AK40_RS10460 SM00014 Acid phosphatase homologues AK40_RS10465 SM00642 Alpha-amylase domain AK40_RS10485 SM00871 Bacterial transcription activator, effector binding domain AK40_RS10510 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS10620 SM00382 ATPases associated with a variety of cellular activities AK40_RS10640 SM00420 helix_turn_helix, Deoxyribose operon repressor AK40_RS10640 SM01134 AK40_RS10640 AK40_RS10685 SM00861 Transketolase, pyrimidine binding domain AK40_RS10750 SM00116 Domain in cystathionine beta-synthase and other proteins. AK40_RS10750 SM00382 ATPases associated with a variety of cellular activities AK40_RS10785 SM00060 Fibronectin type 3 domain AK40_RS10785 SM00495 Chitin-binding domain type 3 AK40_RS10815 SM00849 Metallo-beta-lactamase superfamily AK40_RS10885 SM00341 Helicase and RNase D C-terminal AK40_RS10885 SM00487 DEAD-like helicases superfamily AK40_RS10885 SM00490 helicase superfamily c-terminal domain AK40_RS10885 SM00956 AK40_RS10885 AK40_RS10935 SM01131 AK40_RS10935 AK40_RS10965 SM01130 AK40_RS10965 AK40_RS10985 SM00091 PAS domain AK40_RS10985 SM00382 ATPases associated with a variety of cellular activities AK40_RS11055 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AK40_RS11095 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AK40_RS11100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS11100 SM00387 Histidine kinase-like ATPases AK40_RS11100 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS11105 SM00448 cheY-homologous receiver domain AK40_RS11105 SM00862 Transcriptional regulatory protein, C terminal AK40_RS11145 SM00344 helix_turn_helix ASNC type AK40_RS11305 SM00382 ATPases associated with a variety of cellular activities AK40_RS11310 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS11385 SM00062 Bacterial periplasmic substrate-binding proteins AK40_RS11390 SM00382 ATPases associated with a variety of cellular activities AK40_RS11410 SM00028 Tetratricopeptide repeats AK40_RS11500 SM00382 ATPases associated with a variety of cellular activities AK40_RS11545 SM00830 Chorismate mutase type II AK40_RS11585 SM00287 Bacterial SH3 domain homologues AK40_RS11610 SM00091 PAS domain AK40_RS11610 SM00382 ATPases associated with a variety of cellular activities AK40_RS11640 SM00382 ATPases associated with a variety of cellular activities AK40_RS11660 SM01133 AK40_RS11660 AK40_RS11695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS11715 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AK40_RS11730 SM00346 helix_turn_helix isocitrate lyase regulation AK40_RS11750 SM00098 Alkaline phosphatase homologues AK40_RS11760 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS11785 SM00850 LytTr DNA-binding domain AK40_RS11885 SM01060 AK40_RS11885 AK40_RS11915 SM00860 SMI1 / KNR4 family AK40_RS11930 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS11935 SM00889 Elongation factor G, domain IV AK40_RS11960 SM00382 ATPases associated with a variety of cellular activities AK40_RS11965 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS11970 SM00860 SMI1 / KNR4 family AK40_RS11980 SM00382 ATPases associated with a variety of cellular activities AK40_RS12005 SM00342 helix_turn_helix, arabinose operon control protein AK40_RS12005 SM00871 Bacterial transcription activator, effector binding domain AK40_RS12030 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS12150 SM00797 Allophanate hydrolase subunit 2 AK40_RS12155 SM00796 Allophanate hydrolase subunit 1 AK40_RS12160 SM00346 helix_turn_helix isocitrate lyase regulation AK40_RS12180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS12245 SM00849 Metallo-beta-lactamase superfamily AK40_RS12320 SM00870 AK40_RS12320 AK40_RS12325 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS12350 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AK40_RS12350 SM00091 PAS domain AK40_RS12350 SM00387 Histidine kinase-like ATPases AK40_RS12350 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS12375 SM00342 helix_turn_helix, arabinose operon control protein AK40_RS12405 SM00448 cheY-homologous receiver domain AK40_RS12410 SM00387 Histidine kinase-like ATPases AK40_RS12525 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS12535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS12535 SM00387 Histidine kinase-like ATPases AK40_RS12535 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS12540 SM00448 cheY-homologous receiver domain AK40_RS12540 SM00862 Transcriptional regulatory protein, C terminal AK40_RS12620 SM00382 ATPases associated with a variety of cellular activities AK40_RS12635 SM00421 helix_turn_helix, Lux Regulon AK40_RS12635 SM00448 cheY-homologous receiver domain AK40_RS12650 SM00382 ATPases associated with a variety of cellular activities AK40_RS12670 SM00226 Low molecular weight phosphatase family AK40_RS12685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS12695 SM00028 Tetratricopeptide repeats AK40_RS12780 SM00448 cheY-homologous receiver domain AK40_RS12780 SM00862 Transcriptional regulatory protein, C terminal AK40_RS12785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS12785 SM00387 Histidine kinase-like ATPases AK40_RS12785 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS12840 SM00849 Metallo-beta-lactamase superfamily AK40_RS12880 SM00422 helix_turn_helix, mercury resistance AK40_RS12900 SM00382 ATPases associated with a variety of cellular activities AK40_RS12910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS12925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS12925 SM00387 Histidine kinase-like ATPases AK40_RS12925 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS12930 SM00448 cheY-homologous receiver domain AK40_RS12930 SM00862 Transcriptional regulatory protein, C terminal AK40_RS12940 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS12980 SM00450 Rhodanese Homology Domain AK40_RS12980 SM00849 Metallo-beta-lactamase superfamily AK40_RS13010 SM00387 Histidine kinase-like ATPases AK40_RS13010 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS13015 SM00448 cheY-homologous receiver domain AK40_RS13015 SM00862 Transcriptional regulatory protein, C terminal AK40_RS13050 SM00354 helix_turn _helix lactose operon repressor AK40_RS13055 SM00028 Tetratricopeptide repeats AK40_RS13135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS13135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS13135 SM00319 Homologues of the ligand binding domain of Tar AK40_RS13180 SM00344 helix_turn_helix ASNC type AK40_RS13225 SM00342 helix_turn_helix, arabinose operon control protein AK40_RS13235 SM00860 SMI1 / KNR4 family AK40_RS13255 SM00287 Bacterial SH3 domain homologues AK40_RS13255 SM00644 AK40_RS13255 AK40_RS13305 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS13330 SM00382 ATPases associated with a variety of cellular activities AK40_RS13340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS13415 SM00382 ATPases associated with a variety of cellular activities AK40_RS13465 SM00422 helix_turn_helix, mercury resistance AK40_RS13480 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS13495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS13520 SM00387 Histidine kinase-like ATPases AK40_RS13520 SM00421 helix_turn_helix, Lux Regulon AK40_RS13520 SM00448 cheY-homologous receiver domain AK40_RS13575 SM00382 ATPases associated with a variety of cellular activities AK40_RS13590 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS13660 SM01266 AK40_RS13660 AK40_RS13670 SM00382 ATPases associated with a variety of cellular activities AK40_RS13720 SM00028 Tetratricopeptide repeats AK40_RS13745 SM01091 Transporter associated domain AK40_RS13750 SM00422 helix_turn_helix, mercury resistance AK40_RS13790 SM01350 AK40_RS13790 AK40_RS13795 SM00861 Transketolase, pyrimidine binding domain AK40_RS13830 SM00914 AK40_RS13830 AK40_RS13855 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS13855 SM00866 AK40_RS13855 AK40_RS13875 SM00849 Metallo-beta-lactamase superfamily AK40_RS13940 SM00248 ankyrin repeats AK40_RS13945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS13950 SM00636 AK40_RS13950 AK40_RS13980 SM00871 Bacterial transcription activator, effector binding domain AK40_RS14020 SM00382 ATPases associated with a variety of cellular activities AK40_RS14045 SM00849 Metallo-beta-lactamase superfamily AK40_RS14050 SM00641 Glycosyl hydrolases family 25 AK40_RS14115 SM00849 Metallo-beta-lactamase superfamily AK40_RS14120 SM00829 Enoylreductase AK40_RS14225 SM00829 Enoylreductase AK40_RS14230 SM00855 Phosphoglycerate mutase family AK40_RS14240 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AK40_RS14240 SM00534 ATPase domain of DNA mismatch repair MUTS family AK40_RS14255 SM00642 Alpha-amylase domain AK40_RS14325 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS14330 SM00829 Enoylreductase AK40_RS14340 SM00028 Tetratricopeptide repeats AK40_RS14410 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AK40_RS14455 SM00479 AK40_RS14455 AK40_RS14460 SM00357 Cold shock protein domain AK40_RS14595 SM00852 Probable molybdopterin binding domain AK40_RS14610 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS14630 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AK40_RS14630 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AK40_RS14740 SM00382 ATPases associated with a variety of cellular activities AK40_RS14760 SM00434 DNA Topoisomerase IV AK40_RS14765 SM00387 Histidine kinase-like ATPases AK40_RS14765 SM00433 TopoisomeraseII AK40_RS14775 SM00881 CoA binding domain AK40_RS14780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AK40_RS14785 SM00448 cheY-homologous receiver domain AK40_RS14785 SM00862 Transcriptional regulatory protein, C terminal AK40_RS14800 SM01207 AK40_RS14800 AK40_RS14815 SM00257 Lysin motif AK40_RS14815 SM00636 AK40_RS14815 AK40_RS14835 SM00479 AK40_RS14835 AK40_RS14850 SM00382 ATPases associated with a variety of cellular activities AK40_RS14920 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AK40_RS14990 SM00644 AK40_RS14990 AK40_RS14990 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AK40_RS14995 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AK40_RS15010 SM00091 PAS domain AK40_RS15010 SM00387 Histidine kinase-like ATPases AK40_RS15010 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS15040 SM01058 CarD-like/TRCF domain AK40_RS15140 SM00382 ATPases associated with a variety of cellular activities AK40_RS15185 SM00644 AK40_RS15185 AK40_RS15200 SM00382 ATPases associated with a variety of cellular activities AK40_RS15205 SM00382 ATPases associated with a variety of cellular activities AK40_RS15220 SM00861 Transketolase, pyrimidine binding domain AK40_RS15235 SM00382 ATPases associated with a variety of cellular activities AK40_RS15240 SM00062 Bacterial periplasmic substrate-binding proteins AK40_RS15255 SM00857 Resolvase, N terminal domain AK40_RS15280 SM01230 AK40_RS15280 AK40_RS15285 SM00422 helix_turn_helix, mercury resistance AK40_RS15310 SM00382 ATPases associated with a variety of cellular activities AK40_RS15340 SM00287 Bacterial SH3 domain homologues AK40_RS15355 SM00420 helix_turn_helix, Deoxyribose operon repressor AK40_RS15355 SM01134 AK40_RS15355 AK40_RS15385 SM00636 AK40_RS15385 AK40_RS15400 SM00411 bacterial (prokaryotic) histone like domain AK40_RS15430 SM00382 ATPases associated with a variety of cellular activities AK40_RS15455 SM00342 helix_turn_helix, arabinose operon control protein AK40_RS15465 SM00478 endonuclease III AK40_RS15500 SM00052 Putative diguanylate phosphodiesterase AK40_RS15500 SM00091 PAS domain AK40_RS15500 SM00267 diguanylate cyclase AK40_RS15555 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS15565 SM00148 Phospholipase C, catalytic domain (part); domain X AK40_RS15575 SM00257 Lysin motif AK40_RS15605 SM00853 MutL C terminal dimerisation domain AK40_RS15605 SM01340 AK40_RS15605 AK40_RS15610 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AK40_RS15610 SM00534 ATPase domain of DNA mismatch repair MUTS family AK40_RS15625 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS15655 SM00322 K homology RNA-binding domain AK40_RS15655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AK40_RS15665 SM00382 ATPases associated with a variety of cellular activities AK40_RS15670 SM00852 Probable molybdopterin binding domain AK40_RS15720 SM00382 ATPases associated with a variety of cellular activities AK40_RS15730 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS15730 SM00866 AK40_RS15730 AK40_RS15735 SM00382 ATPases associated with a variety of cellular activities AK40_RS15735 SM00843 AK40_RS15735 AK40_RS15750 SM00849 Metallo-beta-lactamase superfamily AK40_RS15760 SM01130 AK40_RS15760 AK40_RS15770 SM00859 Semialdehyde dehydrogenase, NAD binding domain AK40_RS15800 SM00316 Ribosomal protein S1-like RNA-binding domain AK40_RS15800 SM00322 K homology RNA-binding domain AK40_RS15805 SM01387 AK40_RS15805 AK40_RS15810 SM00904 Riboflavin kinase AK40_RS15845 SM00316 Ribosomal protein S1-like RNA-binding domain AK40_RS15845 SM00322 K homology RNA-binding domain AK40_RS15860 SM00507 HNH nucleases AK40_RS15870 SM00479 AK40_RS15870 AK40_RS15870 SM00481 DNA polymerase alpha chain like domain AK40_RS15880 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AK40_RS15925 SM00382 ATPases associated with a variety of cellular activities AK40_RS15925 SM01086 C-terminal, D2-small domain, of ClpB protein AK40_RS15945 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AK40_RS15945 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AK40_RS15945 SM00493 AK40_RS15945 AK40_RS15955 SM00881 CoA binding domain AK40_RS16005 SM00382 ATPases associated with a variety of cellular activities AK40_RS16005 SM00962 SRP54-type protein, GTPase domain AK40_RS16005 SM00963 SRP54-type protein, helical bundle domain AK40_RS16015 SM00382 ATPases associated with a variety of cellular activities AK40_RS16015 SM00962 SRP54-type protein, GTPase domain AK40_RS16015 SM00963 SRP54-type protein, helical bundle domain AK40_RS16020 SM00968 SMC proteins Flexible Hinge Domain AK40_RS16025 SM00358 Double-stranded RNA binding motif AK40_RS16025 SM00535 Ribonuclease III family AK40_RS16035 SM00822 AK40_RS16035 AK40_RS16040 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AK40_RS16055 SM00487 DEAD-like helicases superfamily AK40_RS16055 SM00490 helicase superfamily c-terminal domain AK40_RS16060 SM01120 AK40_RS16060 AK40_RS16060 SM01121 AK40_RS16060 AK40_RS16080 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AK40_RS16095 SM00220 Serine/Threonine protein kinases, catalytic domain AK40_RS16095 SM00740 AK40_RS16095 AK40_RS16100 SM00331 Sigma factor PP2C-like phosphatases AK40_RS16100 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AK40_RS16125 SM00487 DEAD-like helicases superfamily AK40_RS16125 SM00490 helicase superfamily c-terminal domain AK40_RS16135 SM01409 AK40_RS16135 AK40_RS16140 SM00072 Guanylate kinase homologues. AK40_RS16155 SM00831 Cation transporter/ATPase, N-terminus AK40_RS16205 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AK40_RS16220 SM00851 MGS-like domain AK40_RS16220 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AK40_RS16220 SM01209 AK40_RS16220 AK40_RS16225 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AK40_RS16250 SM00363 S4 RNA-binding domain AK40_RS16275 SM00363 S4 RNA-binding domain AK40_RS16320 SM00864 Tubulin/FtsZ family, GTPase domain AK40_RS16320 SM00865 Tubulin/FtsZ family, C-terminal domain AK40_RS16325 SM00842 Cell division protein FtsA AK40_RS16365 SM00740 AK40_RS16365 AK40_RS16370 SM00740 AK40_RS16370 AK40_RS16400 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AK40_RS16420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AK40_RS16460 SM00855 Phosphoglycerate mutase family AK40_RS16525 SM00878 Biotin carboxylase C-terminal domain AK40_RS16545 SM00670 Large family of predicted nucleotide-binding domains AK40_RS16570 SM00838 Elongation factor G C-terminus AK40_RS16650 SM00861 Transketolase, pyrimidine binding domain AK40_RS16680 SM00849 Metallo-beta-lactamase superfamily AK40_RS16745 SM00052 Putative diguanylate phosphodiesterase AK40_RS16790 SM00267 diguanylate cyclase AK40_RS16840 SM00387 Histidine kinase-like ATPases AK40_RS16840 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS16855 SM00354 helix_turn _helix lactose operon repressor AK40_RS16875 SM00642 Alpha-amylase domain AK40_RS16880 SM00642 Alpha-amylase domain AK40_RS16885 SM00382 ATPases associated with a variety of cellular activities AK40_RS16925 SM00382 ATPases associated with a variety of cellular activities AK40_RS17010 SM01007 Class II Aldolase and Adducin N-terminal domain AK40_RS17035 SM00267 diguanylate cyclase AK40_RS17070 SM01061 CAT RNA binding domain AK40_RS17080 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS17080 SM00866 AK40_RS17080 AK40_RS17095 SM00849 Metallo-beta-lactamase superfamily AK40_RS17200 SM00387 Histidine kinase-like ATPases AK40_RS17210 SM00936 Penicillin-binding protein 5, C-terminal domain AK40_RS17215 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS17220 SM00382 ATPases associated with a variety of cellular activities AK40_RS17240 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS17260 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AK40_RS17355 SM00354 helix_turn _helix lactose operon repressor AK40_RS17375 SM00704 CDGSH-type zinc finger. Function unknown. AK40_RS17405 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS17405 SM00876 Biotin and Thiamin Synthesis associated domain AK40_RS17455 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS17490 SM00859 Semialdehyde dehydrogenase, NAD binding domain AK40_RS17505 SM00849 Metallo-beta-lactamase superfamily AK40_RS17530 SM00849 Metallo-beta-lactamase superfamily AK40_RS17580 SM00382 ATPases associated with a variety of cellular activities AK40_RS17590 SM00062 Bacterial periplasmic substrate-binding proteins AK40_RS17590 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AK40_RS17630 SM00861 Transketolase, pyrimidine binding domain AK40_RS17650 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AK40_RS17665 SM00091 PAS domain AK40_RS17665 SM00382 ATPases associated with a variety of cellular activities AK40_RS17690 SM00448 cheY-homologous receiver domain AK40_RS17695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AK40_RS17710 SM00363 S4 RNA-binding domain AK40_RS17715 SM00861 Transketolase, pyrimidine binding domain AK40_RS17750 SM00878 Biotin carboxylase C-terminal domain AK40_RS17800 SM00382 ATPases associated with a variety of cellular activities AK40_RS17820 SM00841 Elongation factor P, C-terminal AK40_RS17820 SM01185 AK40_RS17820 AK40_RS17855 SM00529 Helix-turn-helix diphteria tox regulatory element AK40_RS17885 SM00450 Rhodanese Homology Domain AK40_RS17890 SM00354 helix_turn _helix lactose operon repressor AK40_RS17945 SM00382 ATPases associated with a variety of cellular activities AK40_RS17950 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS17980 SM00487 DEAD-like helicases superfamily AK40_RS17980 SM00490 helicase superfamily c-terminal domain AK40_RS18020 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AK40_RS18055 SM00382 ATPases associated with a variety of cellular activities AK40_RS18105 SM01018 B12 binding domain AK40_RS18135 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS18145 SM00849 Metallo-beta-lactamase superfamily AK40_RS18185 SM00382 ATPases associated with a variety of cellular activities AK40_RS18250 SM00382 ATPases associated with a variety of cellular activities AK40_RS18265 SM00518 AP endonuclease family 2 AK40_RS18270 SM00487 DEAD-like helicases superfamily AK40_RS18270 SM00490 helicase superfamily c-terminal domain AK40_RS18305 SM00400 zinc finger AK40_RS18305 SM00493 AK40_RS18305 AK40_RS18305 SM00766 DNA primase DnaG DnaB-binding AK40_RS18325 SM00116 Domain in cystathionine beta-synthase and other proteins. AK40_RS18360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AK40_RS18395 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS18410 SM00271 DnaJ molecular chaperone homology domain AK40_RS18430 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS18440 SM00838 Elongation factor G C-terminus AK40_RS18470 SM00849 Metallo-beta-lactamase superfamily AK40_RS18480 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AK40_RS18500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AK40_RS18510 SM01103 AK40_RS18510 AK40_RS18565 SM00954 Region found in RelA / SpoT proteins AK40_RS18575 SM00098 Alkaline phosphatase homologues AK40_RS18600 SM00855 Phosphoglycerate mutase family AK40_RS18645 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS18670 SM00382 ATPases associated with a variety of cellular activities AK40_RS18765 SM00732 Likely ribonuclease with RNase H fold. AK40_RS18775 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AK40_RS18810 SM00028 Tetratricopeptide repeats AK40_RS18830 SM00382 ATPases associated with a variety of cellular activities AK40_RS18870 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AK40_RS18870 SM00954 Region found in RelA / SpoT proteins AK40_RS18915 SM01323 AK40_RS18915 AK40_RS18935 SM00382 ATPases associated with a variety of cellular activities AK40_RS18940 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AK40_RS18960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS18975 SM00257 Lysin motif AK40_RS19025 SM00382 ATPases associated with a variety of cellular activities AK40_RS19030 SM00387 Histidine kinase-like ATPases AK40_RS19035 SM00448 cheY-homologous receiver domain AK40_RS19035 SM00862 Transcriptional regulatory protein, C terminal AK40_RS19045 SM01317 AK40_RS19045 AK40_RS19135 SM00382 ATPases associated with a variety of cellular activities AK40_RS19160 SM00487 DEAD-like helicases superfamily AK40_RS19160 SM00491 AK40_RS19160 AK40_RS19185 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS19240 SM00257 Lysin motif AK40_RS19250 SM01004 Delta-aminolevulinic acid dehydratase AK40_RS19275 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS19290 SM00382 ATPases associated with a variety of cellular activities AK40_RS19290 SM00464 Found in ATP-dependent protease La (LON) AK40_RS19295 SM00382 ATPases associated with a variety of cellular activities AK40_RS19300 SM00382 ATPases associated with a variety of cellular activities AK40_RS19300 SM00994 ClpX C4-type zinc finger AK40_RS19300 SM01086 C-terminal, D2-small domain, of ClpB protein AK40_RS19355 SM00909 Sporulation and spore germination AK40_RS19390 SM00421 helix_turn_helix, Lux Regulon AK40_RS19410 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS19435 SM00382 ATPases associated with a variety of cellular activities AK40_RS19485 SM00465 GIY-YIG type nucleases (URI domain) AK40_RS19495 SM00893 Electron transfer flavoprotein domain AK40_RS19500 SM00893 Electron transfer flavoprotein domain AK40_RS19560 SM00382 ATPases associated with a variety of cellular activities AK40_RS19565 SM00387 Histidine kinase-like ATPases AK40_RS19565 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS19570 SM00448 cheY-homologous receiver domain AK40_RS19570 SM00862 Transcriptional regulatory protein, C terminal AK40_RS19585 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AK40_RS19605 SM00382 ATPases associated with a variety of cellular activities AK40_RS19620 SM00725 NEAr Transporter domain AK40_RS19625 SM00725 NEAr Transporter domain AK40_RS19635 SM00363 S4 RNA-binding domain AK40_RS19645 SM00463 Small MutS-related domain AK40_RS19645 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AK40_RS19645 SM00534 ATPase domain of DNA mismatch repair MUTS family AK40_RS19650 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AK40_RS19650 SM00481 DNA polymerase alpha chain like domain AK40_RS19650 SM00483 DNA polymerase X family AK40_RS19690 SM00873 B3/4 domain AK40_RS19690 SM00874 tRNA synthetase B5 domain AK40_RS19690 SM00896 Ferredoxin-fold anticodon binding domain AK40_RS19700 SM00967 RNA 2'-O ribose methyltransferase substrate binding AK40_RS19785 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AK40_RS19795 SM00382 ATPases associated with a variety of cellular activities AK40_RS19815 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AK40_RS19830 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AK40_RS19830 SM01232 AK40_RS19830 AK40_RS19835 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AK40_RS19835 SM00474 3'-5' exonuclease AK40_RS19835 SM00475 5'-3' exonuclease AK40_RS19835 SM00482 DNA polymerase A domain AK40_RS19840 SM00091 PAS domain AK40_RS19840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS19840 SM00387 Histidine kinase-like ATPases AK40_RS19840 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS19845 SM00448 cheY-homologous receiver domain AK40_RS19845 SM00862 Transcriptional regulatory protein, C terminal AK40_RS19865 SM01329 AK40_RS19865 AK40_RS19915 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS19920 SM00919 Malic enzyme, NAD binding domain AK40_RS19920 SM01274 AK40_RS19920 AK40_RS19925 SM00481 DNA polymerase alpha chain like domain AK40_RS19960 SM00116 Domain in cystathionine beta-synthase and other proteins. AK40_RS19970 SM00849 Metallo-beta-lactamase superfamily AK40_RS20030 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS20040 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AK40_RS20040 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AK40_RS20175 SM00981 AK40_RS20175 AK40_RS20215 SM00363 S4 RNA-binding domain AK40_RS20215 SM01390 AK40_RS20215 AK40_RS20235 SM00860 SMI1 / KNR4 family AK40_RS20250 SM00363 S4 RNA-binding domain AK40_RS20280 SM00116 Domain in cystathionine beta-synthase and other proteins. AK40_RS20300 SM00448 cheY-homologous receiver domain AK40_RS20300 SM00862 Transcriptional regulatory protein, C terminal AK40_RS20305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS20305 SM00387 Histidine kinase-like ATPases AK40_RS20305 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS20310 SM00248 ankyrin repeats AK40_RS20345 SM00354 helix_turn _helix lactose operon repressor AK40_RS20395 SM00382 ATPases associated with a variety of cellular activities AK40_RS20430 SM00382 ATPases associated with a variety of cellular activities AK40_RS20430 SM00843 AK40_RS20430 AK40_RS20470 SM00849 Metallo-beta-lactamase superfamily AK40_RS20490 SM00642 Alpha-amylase domain AK40_RS20510 SM00420 helix_turn_helix, Deoxyribose operon repressor AK40_RS20515 SM00363 S4 RNA-binding domain AK40_RS20535 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS20560 SM01058 CarD-like/TRCF domain AK40_RS20595 SM00852 Probable molybdopterin binding domain AK40_RS20610 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS20630 SM00450 Rhodanese Homology Domain AK40_RS20710 SM00382 ATPases associated with a variety of cellular activities AK40_RS20730 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS20740 SM00382 ATPases associated with a variety of cellular activities AK40_RS20795 SM00014 Acid phosphatase homologues AK40_RS20810 SM00852 Probable molybdopterin binding domain AK40_RS20870 SM00420 helix_turn_helix, Deoxyribose operon repressor AK40_RS20870 SM01134 AK40_RS20870 AK40_RS20880 SM00387 Histidine kinase-like ATPases AK40_RS20885 SM00387 Histidine kinase-like ATPases AK40_RS20885 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS20915 SM00382 ATPases associated with a variety of cellular activities AK40_RS20970 SM01234 AK40_RS20970 AK40_RS20975 SM00947 Carbonic anhydrase AK40_RS20995 SM00894 Excalibur calcium-binding domain AK40_RS21095 SM00899 AK40_RS21095 AK40_RS21105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS21105 SM00387 Histidine kinase-like ATPases AK40_RS21105 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS21110 SM00448 cheY-homologous receiver domain AK40_RS21110 SM00862 Transcriptional regulatory protein, C terminal AK40_RS21140 SM00046 Diacylglycerol kinase catalytic domain (presumed) AK40_RS21185 SM00382 ATPases associated with a variety of cellular activities AK40_RS21190 SM00342 helix_turn_helix, arabinose operon control protein AK40_RS21190 SM00871 Bacterial transcription activator, effector binding domain AK40_RS21195 SM00448 cheY-homologous receiver domain AK40_RS21195 SM00862 Transcriptional regulatory protein, C terminal AK40_RS21200 SM00387 Histidine kinase-like ATPases AK40_RS21215 SM00382 ATPases associated with a variety of cellular activities AK40_RS21235 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS21235 SM00866 AK40_RS21235 AK40_RS21265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS21265 SM00387 Histidine kinase-like ATPases AK40_RS21265 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS21270 SM00448 cheY-homologous receiver domain AK40_RS21270 SM00862 Transcriptional regulatory protein, C terminal AK40_RS21275 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AK40_RS21315 SM00357 Cold shock protein domain AK40_RS21355 SM00642 Alpha-amylase domain AK40_RS21590 SM00316 Ribosomal protein S1-like RNA-binding domain AK40_RS21600 SM00344 helix_turn_helix ASNC type AK40_RS21635 SM01298 AK40_RS21635 AK40_RS21640 SM00479 AK40_RS21640 AK40_RS21730 SM00871 Bacterial transcription activator, effector binding domain AK40_RS21780 SM00382 ATPases associated with a variety of cellular activities AK40_RS21845 SM00382 ATPases associated with a variety of cellular activities AK40_RS21905 SM00422 helix_turn_helix, mercury resistance AK40_RS21920 SM00855 Phosphoglycerate mutase family AK40_RS21930 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS21990 SM00382 ATPases associated with a variety of cellular activities AK40_RS22010 SM00382 ATPases associated with a variety of cellular activities AK40_RS22010 SM00930 AK40_RS22010 AK40_RS22025 SM00493 AK40_RS22025 AK40_RS22110 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS22120 SM00849 Metallo-beta-lactamase superfamily AK40_RS22135 SM00382 ATPases associated with a variety of cellular activities AK40_RS22200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS22200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS22275 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS22300 SM00448 cheY-homologous receiver domain AK40_RS22300 SM00862 Transcriptional regulatory protein, C terminal AK40_RS22305 SM00387 Histidine kinase-like ATPases AK40_RS22305 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS22325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS22325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS22330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS22330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS22350 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS22440 SM01276 AK40_RS22440 AK40_RS22475 SM00363 S4 RNA-binding domain AK40_RS22485 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AK40_RS22490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS22525 SM00382 ATPases associated with a variety of cellular activities AK40_RS22560 SM00382 ATPases associated with a variety of cellular activities AK40_RS22580 SM00448 cheY-homologous receiver domain AK40_RS22580 SM00862 Transcriptional regulatory protein, C terminal AK40_RS22590 SM00382 ATPases associated with a variety of cellular activities AK40_RS22675 SM00316 Ribosomal protein S1-like RNA-binding domain AK40_RS22675 SM00357 Cold shock protein domain AK40_RS22675 SM00955 AK40_RS22675 AK40_RS22705 SM01192 AK40_RS22705 AK40_RS22705 SM01193 AK40_RS22705 AK40_RS22725 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AK40_RS22825 SM00028 Tetratricopeptide repeats AK40_RS22865 SM00487 DEAD-like helicases superfamily AK40_RS22865 SM00490 helicase superfamily c-terminal domain AK40_RS22880 SM00422 helix_turn_helix, mercury resistance AK40_RS22900 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS22915 SM00422 helix_turn_helix, mercury resistance AK40_RS22935 SM00382 ATPases associated with a variety of cellular activities AK40_RS22945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AK40_RS22945 SM00245 tail specific protease AK40_RS22955 SM00382 ATPases associated with a variety of cellular activities AK40_RS22970 SM00937 AK40_RS22970 AK40_RS22975 SM00957 SecA DEAD-like domain AK40_RS22975 SM00958 SecA preprotein cross-linking domain AK40_RS22985 SM00357 Cold shock protein domain AK40_RS22995 SM00487 DEAD-like helicases superfamily AK40_RS22995 SM00490 helicase superfamily c-terminal domain AK40_RS23035 SM00984 UDP binding domain AK40_RS23050 SM00382 ATPases associated with a variety of cellular activities AK40_RS23055 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AK40_RS23105 SM00850 LytTr DNA-binding domain AK40_RS23230 SM00287 Bacterial SH3 domain homologues AK40_RS23260 SM00287 Bacterial SH3 domain homologues AK40_RS23290 SM00487 DEAD-like helicases superfamily AK40_RS23290 SM00490 helicase superfamily c-terminal domain AK40_RS23340 SM00382 ATPases associated with a variety of cellular activities AK40_RS23350 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS23375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS23375 SM00387 Histidine kinase-like ATPases AK40_RS23375 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS23380 SM00448 cheY-homologous receiver domain AK40_RS23380 SM00862 Transcriptional regulatory protein, C terminal AK40_RS23405 SM00984 UDP binding domain AK40_RS23495 SM00382 ATPases associated with a variety of cellular activities AK40_RS23500 SM00850 LytTr DNA-binding domain AK40_RS23580 SM00052 Putative diguanylate phosphodiesterase AK40_RS23580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AK40_RS23580 SM00091 PAS domain AK40_RS23580 SM00267 diguanylate cyclase AK40_RS23600 SM00382 ATPases associated with a variety of cellular activities AK40_RS23670 SM00226 Low molecular weight phosphatase family AK40_RS23685 SM00903 Flavin reductase like domain AK40_RS23720 SM00937 AK40_RS23720 AK40_RS23735 SM00357 Cold shock protein domain AK40_RS23735 SM00382 ATPases associated with a variety of cellular activities AK40_RS23735 SM00959 Rho termination factor, N-terminal domain AK40_RS23755 SM00448 cheY-homologous receiver domain AK40_RS23805 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS23840 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS23895 SM00155 Phospholipase D. Active site motifs. AK40_RS23905 SM00052 Putative diguanylate phosphodiesterase AK40_RS23905 SM00267 diguanylate cyclase AK40_RS23915 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS23925 SM00421 helix_turn_helix, Lux Regulon AK40_RS23925 SM00448 cheY-homologous receiver domain AK40_RS23930 SM00387 Histidine kinase-like ATPases AK40_RS23940 SM00382 ATPases associated with a variety of cellular activities AK40_RS23980 SM00836 DALR anticodon binding domain AK40_RS23980 SM01016 Arginyl tRNA synthetase N terminal dom AK40_RS24025 SM00422 helix_turn_helix, mercury resistance AK40_RS24055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AK40_RS24065 SM00382 ATPases associated with a variety of cellular activities AK40_RS24110 SM00936 Penicillin-binding protein 5, C-terminal domain AK40_RS24155 SM00986 Uracil DNA glycosylase superfamily AK40_RS24155 SM00987 UreE urease accessory protein, C-terminal domain AK40_RS24165 SM00382 ATPases associated with a variety of cellular activities AK40_RS24175 SM00354 helix_turn _helix lactose operon repressor AK40_RS24215 SM00100 Cyclic nucleotide-monophosphate binding domain AK40_RS24225 SM00421 helix_turn_helix, Lux Regulon AK40_RS24225 SM00448 cheY-homologous receiver domain AK40_RS24230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AK40_RS24240 SM00267 diguanylate cyclase AK40_RS24255 SM00448 cheY-homologous receiver domain AK40_RS24255 SM00850 LytTr DNA-binding domain AK40_RS24285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS24310 SM00382 ATPases associated with a variety of cellular activities AK40_RS24365 SM00448 cheY-homologous receiver domain AK40_RS24365 SM00850 LytTr DNA-binding domain AK40_RS24370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AK40_RS24370 SM00387 Histidine kinase-like ATPases AK40_RS24425 SM00487 DEAD-like helicases superfamily AK40_RS24425 SM00490 helicase superfamily c-terminal domain AK40_RS24435 SM01240 AK40_RS24435 AK40_RS24455 SM00507 HNH nucleases AK40_RS24470 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AK40_RS24475 SM00849 Metallo-beta-lactamase superfamily AK40_RS24490 SM00091 PAS domain AK40_RS24490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS24490 SM00387 Histidine kinase-like ATPases AK40_RS24490 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS24495 SM00448 cheY-homologous receiver domain AK40_RS24495 SM00862 Transcriptional regulatory protein, C terminal AK40_RS24520 SM00788 Adenylosuccinate synthetase AK40_RS24535 SM00267 diguanylate cyclase AK40_RS24580 SM00470 ParB-like nuclease domain AK40_RS24590 SM00470 ParB-like nuclease domain AK40_RS24600 SM01228 AK40_RS24600 AK40_RS24610 SM00393 Putative single-stranded nucleic acids-binding domain AK40_RS24610 SM01245 AK40_RS24610 AK40_RS24630 SM00382 ATPases associated with a variety of cellular activities AK40_RS24630 SM00760 Bacterial dnaA protein helix-turn-helix domain AK40_RS24635 SM00480 DNA polymerase III beta subunit AK40_RS24650 SM00387 Histidine kinase-like ATPases AK40_RS24650 SM00433 TopoisomeraseII AK40_RS24655 SM00434 DNA Topoisomerase IV AK40_RS24690 SM00116 Domain in cystathionine beta-synthase and other proteins. AK40_RS24690 SM01240 AK40_RS24690 AK40_RS24695 SM00936 Penicillin-binding protein 5, C-terminal domain AK40_RS24750 SM00382 ATPases associated with a variety of cellular activities AK40_RS24760 SM00493 AK40_RS24760 AK40_RS24845 SM00966 SpoVT / AbrB like domain AK40_RS24860 SM00493 AK40_RS24860 AK40_RS24865 SM00650 Ribosomal RNA adenine dimethylases AK40_RS24910 SM01400 AK40_RS24910 AK40_RS24925 SM00487 DEAD-like helicases superfamily AK40_RS24925 SM00490 helicase superfamily c-terminal domain AK40_RS24925 SM00982 AK40_RS24925 AK40_RS24925 SM01058 CarD-like/TRCF domain AK40_RS24930 SM00966 SpoVT / AbrB like domain AK40_RS24945 SM00363 S4 RNA-binding domain AK40_RS24965 SM00316 Ribosomal protein S1-like RNA-binding domain AK40_RS24980 SM00331 Sigma factor PP2C-like phosphatases AK40_RS24980 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AK40_RS24985 SM00977 TilS substrate C-terminal domain AK40_RS24995 SM00382 ATPases associated with a variety of cellular activities AK40_RS25035 SM00905 Dihydroneopterin aldolase AK40_RS25045 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS25090 SM00382 ATPases associated with a variety of cellular activities AK40_RS25090 SM01086 C-terminal, D2-small domain, of ClpB protein AK40_RS25095 SM00382 ATPases associated with a variety of cellular activities AK40_RS25105 SM00670 Large family of predicted nucleotide-binding domains AK40_RS25130 SM00840 AK40_RS25130 AK40_RS25135 SM00535 Ribonuclease III family AK40_RS25140 SM00967 RNA 2'-O ribose methyltransferase substrate binding AK40_RS25150 SM00421 helix_turn_helix, Lux Regulon AK40_RS25165 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AK40_RS25170 SM00649 Ribosomal protein L11/L12 AK40_RS25200 SM00663 RNA polymerase I subunit A N-terminus AK40_RS25220 SM00838 Elongation factor G C-terminus AK40_RS25220 SM00889 Elongation factor G, domain IV AK40_RS25230 SM01403 AK40_RS25230 AK40_RS25250 SM01382 AK40_RS25250 AK40_RS25250 SM01383 AK40_RS25250 AK40_RS25265 SM00322 K homology RNA-binding domain AK40_RS25285 SM01374 AK40_RS25285 AK40_RS25290 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AK40_RS25350 SM00316 Ribosomal protein S1-like RNA-binding domain AK40_RS25370 SM00662 RNA polymerases D AK40_RS25380 SM00382 ATPases associated with a variety of cellular activities AK40_RS25385 SM00382 ATPases associated with a variety of cellular activities AK40_RS25415 SM00646 AK40_RS25415 AK40_RS25430 SM01251 AK40_RS25430 AK40_RS25550 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS25550 SM00895 AK40_RS25550 AK40_RS25565 SM01350 AK40_RS25565 AK40_RS25610 SM00382 ATPases associated with a variety of cellular activities AK40_RS25610 SM00930 AK40_RS25610 AK40_RS25620 SM00829 Enoylreductase AK40_RS25670 SM00382 ATPases associated with a variety of cellular activities AK40_RS25675 SM00382 ATPases associated with a variety of cellular activities AK40_RS25690 SM00342 helix_turn_helix, arabinose operon control protein AK40_RS25780 SM00563 Phosphate acyltransferases AK40_RS25790 SM00354 helix_turn _helix lactose operon repressor AK40_RS25850 SM00382 ATPases associated with a variety of cellular activities AK40_RS25880 SM00382 ATPases associated with a variety of cellular activities AK40_RS25885 SM00382 ATPases associated with a variety of cellular activities AK40_RS25960 SM00487 DEAD-like helicases superfamily AK40_RS25960 SM00490 helicase superfamily c-terminal domain AK40_RS25985 SM01005 Alanine racemase, C-terminal domain AK40_RS26000 SM00316 Ribosomal protein S1-like RNA-binding domain AK40_RS26000 SM00732 Likely ribonuclease with RNase H fold. AK40_RS26010 SM00731 SprT homologues. AK40_RS26115 SM00382 ATPases associated with a variety of cellular activities AK40_RS26120 SM00881 CoA binding domain AK40_RS26135 SM00883 Chaperonin 10 Kd subunit AK40_RS26155 SM00860 SMI1 / KNR4 family AK40_RS26170 SM00448 cheY-homologous receiver domain AK40_RS26170 SM00862 Transcriptional regulatory protein, C terminal AK40_RS26175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS26175 SM00387 Histidine kinase-like ATPases AK40_RS26175 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS26260 SM00382 ATPases associated with a variety of cellular activities AK40_RS26265 SM00387 Histidine kinase-like ATPases AK40_RS26265 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS26270 SM00448 cheY-homologous receiver domain AK40_RS26270 SM00862 Transcriptional regulatory protein, C terminal AK40_RS26315 SM01001 AIR carboxylase AK40_RS26325 SM00998 Adenylosuccinate lyase C-terminus AK40_RS26340 SM01211 AK40_RS26340 AK40_RS26365 SM00798 AICARFT/IMPCHase bienzyme AK40_RS26365 SM00851 MGS-like domain AK40_RS26370 SM01209 AK40_RS26370 AK40_RS26370 SM01210 AK40_RS26370 AK40_RS26380 SM00244 prohibitin homologues AK40_RS26405 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AK40_RS26405 SM00292 breast cancer carboxy-terminal domain AK40_RS26405 SM00532 Ligase N family AK40_RS26435 SM00382 ATPases associated with a variety of cellular activities AK40_RS26435 SM00930 AK40_RS26435 AK40_RS26465 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS26485 SM00845 GatB domain AK40_RS26490 SM00046 Diacylglycerol kinase catalytic domain (presumed) AK40_RS26505 SM00382 ATPases associated with a variety of cellular activities AK40_RS26550 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AK40_RS26550 SM00387 Histidine kinase-like ATPases AK40_RS26550 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS26570 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AK40_RS26620 SM01007 Class II Aldolase and Adducin N-terminal domain AK40_RS26730 SM00062 Bacterial periplasmic substrate-binding proteins AK40_RS26730 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AK40_RS26735 SM00382 ATPases associated with a variety of cellular activities AK40_RS26740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS26740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS26745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS26745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS26750 SM00642 Alpha-amylase domain AK40_RS26770 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AK40_RS26770 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AK40_RS26770 SM00493 AK40_RS26770 AK40_RS26790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS26790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS26810 SM00382 ATPases associated with a variety of cellular activities AK40_RS26815 SM00382 ATPases associated with a variety of cellular activities AK40_RS26820 SM00060 Fibronectin type 3 domain AK40_RS26820 SM00636 AK40_RS26820 AK40_RS26820 SM00637 AK40_RS26820 AK40_RS26855 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS26925 SM00831 Cation transporter/ATPase, N-terminus AK40_RS26935 SM00226 Low molecular weight phosphatase family AK40_RS27025 SM00478 endonuclease III AK40_RS27045 SM00382 ATPases associated with a variety of cellular activities AK40_RS27065 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS27120 SM00984 UDP binding domain AK40_RS27205 SM00478 endonuclease III AK40_RS27205 SM00525 AK40_RS27205 AK40_RS27230 SM00382 ATPases associated with a variety of cellular activities AK40_RS27250 SM00382 ATPases associated with a variety of cellular activities AK40_RS27400 SM00382 ATPases associated with a variety of cellular activities AK40_RS27435 SM00567 E-Z type HEAT repeats AK40_RS27450 SM00052 Putative diguanylate phosphodiesterase AK40_RS27450 SM00091 PAS domain AK40_RS27450 SM00267 diguanylate cyclase AK40_RS27460 SM00763 PrkA AAA domain AK40_RS27475 SM00364 Leucine-rich repeats, bacterial type AK40_RS27475 SM00365 Leucine-rich repeat, SDS22-like subfamily AK40_RS27475 SM00369 Leucine-rich repeats, typical (most populated) subfamily AK40_RS27475 SM00725 NEAr Transporter domain AK40_RS27490 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AK40_RS27500 SM00244 prohibitin homologues AK40_RS27505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS27505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS27510 SM00091 PAS domain AK40_RS27510 SM00387 Histidine kinase-like ATPases AK40_RS27515 SM00448 cheY-homologous receiver domain AK40_RS27535 SM00248 ankyrin repeats AK40_RS27545 SM00448 cheY-homologous receiver domain AK40_RS27545 SM00862 Transcriptional regulatory protein, C terminal AK40_RS27550 SM00387 Histidine kinase-like ATPases AK40_RS27550 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS27565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS27565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS27570 SM00387 Histidine kinase-like ATPases AK40_RS27575 SM00448 cheY-homologous receiver domain AK40_RS27585 SM00919 Malic enzyme, NAD binding domain AK40_RS27585 SM01274 AK40_RS27585 AK40_RS27600 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS27610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS27610 SM00387 Histidine kinase-like ATPases AK40_RS27610 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS27615 SM00448 cheY-homologous receiver domain AK40_RS27615 SM00862 Transcriptional regulatory protein, C terminal AK40_RS27635 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AK40_RS27635 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AK40_RS27650 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AK40_RS27650 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AK40_RS27660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS27720 SM01091 Transporter associated domain AK40_RS27735 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AK40_RS27765 SM00382 ATPases associated with a variety of cellular activities AK40_RS27790 SM00327 von Willebrand factor (vWF) type A domain AK40_RS27795 SM00382 ATPases associated with a variety of cellular activities AK40_RS27800 SM00155 Phospholipase D. Active site motifs. AK40_RS27810 SM00052 Putative diguanylate phosphodiesterase AK40_RS27810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AK40_RS27810 SM00091 PAS domain AK40_RS27810 SM00267 diguanylate cyclase AK40_RS27820 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS27820 SM00866 AK40_RS27820 AK40_RS27830 SM00642 Alpha-amylase domain AK40_RS27850 SM00387 Histidine kinase-like ATPases AK40_RS27855 SM00421 helix_turn_helix, Lux Regulon AK40_RS27855 SM00448 cheY-homologous receiver domain AK40_RS27885 SM00382 ATPases associated with a variety of cellular activities AK40_RS27890 SM00062 Bacterial periplasmic substrate-binding proteins AK40_RS27890 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AK40_RS27940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS27940 SM00387 Histidine kinase-like ATPases AK40_RS27940 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS27945 SM00448 cheY-homologous receiver domain AK40_RS27945 SM00862 Transcriptional regulatory protein, C terminal AK40_RS27985 SM00382 ATPases associated with a variety of cellular activities AK40_RS27990 SM00382 ATPases associated with a variety of cellular activities AK40_RS28000 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS28010 SM00354 helix_turn _helix lactose operon repressor AK40_RS28025 SM00382 ATPases associated with a variety of cellular activities AK40_RS28055 SM00829 Enoylreductase AK40_RS28065 SM00770 Zinc dependent phospholipase C (alpha toxin) AK40_RS28100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AK40_RS28110 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS28155 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS28255 SM00899 AK40_RS28255 AK40_RS28400 SM00116 Domain in cystathionine beta-synthase and other proteins. AK40_RS28420 SM00287 Bacterial SH3 domain homologues AK40_RS28430 SM00382 ATPases associated with a variety of cellular activities AK40_RS28520 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS28545 SM00382 ATPases associated with a variety of cellular activities AK40_RS28580 SM00640 Glycosyl hydrolases family 32 AK40_RS28590 SM00354 helix_turn _helix lactose operon repressor AK40_RS28650 SM00450 Rhodanese Homology Domain AK40_RS28660 SM00450 Rhodanese Homology Domain AK40_RS28665 SM00450 Rhodanese Homology Domain AK40_RS28665 SM00849 Metallo-beta-lactamase superfamily AK40_RS28675 SM00450 Rhodanese Homology Domain AK40_RS28680 SM00450 Rhodanese Homology Domain AK40_RS28705 SM00829 Enoylreductase AK40_RS28755 SM00287 Bacterial SH3 domain homologues AK40_RS28765 SM00382 ATPases associated with a variety of cellular activities AK40_RS28825 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AK40_RS28930 SM00344 helix_turn_helix ASNC type AK40_RS28985 SM01060 AK40_RS28985 AK40_RS29020 SM00382 ATPases associated with a variety of cellular activities AK40_RS29025 SM00382 ATPases associated with a variety of cellular activities AK40_RS29030 SM00062 Bacterial periplasmic substrate-binding proteins AK40_RS29030 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AK40_RS29040 SM00382 ATPases associated with a variety of cellular activities AK40_RS29110 SM00644 AK40_RS29110 AK40_RS29115 SM00729 Elongator protein 3, MiaB family, Radical SAM AK40_RS29155 SM00957 SecA DEAD-like domain AK40_RS29155 SM00958 SecA preprotein cross-linking domain AK40_RS29225 SM00646 AK40_RS29225 AK40_RS29240 SM00342 helix_turn_helix, arabinose operon control protein AK40_RS29240 SM00871 Bacterial transcription activator, effector binding domain AK40_RS29310 SM00382 ATPases associated with a variety of cellular activities AK40_RS29315 SM00382 ATPases associated with a variety of cellular activities AK40_RS29355 SM00860 SMI1 / KNR4 family AK40_RS29370 SM00091 PAS domain AK40_RS29370 SM00387 Histidine kinase-like ATPases AK40_RS29375 SM00448 cheY-homologous receiver domain AK40_RS29400 SM00490 helicase superfamily c-terminal domain AK40_RS29435 SM00487 DEAD-like helicases superfamily AK40_RS29435 SM00490 helicase superfamily c-terminal domain AK40_RS29485 SM00422 helix_turn_helix, mercury resistance AK40_RS29615 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS29690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AK40_RS29710 SM00460 Transglutaminase/protease-like homologues AK40_RS29775 SM00331 Sigma factor PP2C-like phosphatases AK40_RS29775 SM00448 cheY-homologous receiver domain AK40_RS29780 SM00138 Methyltransferase, chemotaxis proteins AK40_RS29785 SM00387 Histidine kinase-like ATPases AK40_RS29785 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS29785 SM00448 cheY-homologous receiver domain AK40_RS29820 SM00829 Enoylreductase AK40_RS29860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AK40_RS29895 SM00028 Tetratricopeptide repeats AK40_RS29920 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS29975 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS30025 SM00347 helix_turn_helix multiple antibiotic resistance protein AK40_RS30040 SM00382 ATPases associated with a variety of cellular activities AK40_RS30205 SM00354 helix_turn _helix lactose operon repressor AK40_RS30215 SM00849 Metallo-beta-lactamase superfamily AK40_RS30240 SM00725 NEAr Transporter domain AK40_RS30275 SM00860 SMI1 / KNR4 family AK40_RS30310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AK40_RS30325 SM00342 helix_turn_helix, arabinose operon control protein AK40_RS30325 SM00871 Bacterial transcription activator, effector binding domain AK40_RS30330 SM00387 Histidine kinase-like ATPases AK40_RS30330 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS30335 SM00448 cheY-homologous receiver domain AK40_RS30335 SM00862 Transcriptional regulatory protein, C terminal AK40_RS30395 SM00357 Cold shock protein domain AK40_RS30510 SM01060 AK40_RS30510 AK40_RS30525 SM00642 Alpha-amylase domain AK40_RS30530 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS30540 SM00316 Ribosomal protein S1-like RNA-binding domain AK40_RS30590 SM00382 ATPases associated with a variety of cellular activities AK40_RS30590 SM01086 C-terminal, D2-small domain, of ClpB protein AK40_RS30620 SM00825 Beta-ketoacyl synthase AK40_RS30660 SM00382 ATPases associated with a variety of cellular activities AK40_RS30665 SM00382 ATPases associated with a variety of cellular activities AK40_RS30705 SM00155 Phospholipase D. Active site motifs. AK40_RS30735 SM01118 AK40_RS30735 AK40_RS30745 SM00954 Region found in RelA / SpoT proteins AK40_RS30910 SM00635 Bacterial Ig-like domain 2 AK40_RS31020 SM00861 Transketolase, pyrimidine binding domain AK40_RS31025 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS31090 SM00382 ATPases associated with a variety of cellular activities AK40_RS31150 SM00530 Helix-turn-helix XRE-family like proteins AK40_RS31170 SM00382 ATPases associated with a variety of cellular activities AK40_RS31190 SM00014 Acid phosphatase homologues AK40_RS31240 SM00448 cheY-homologous receiver domain AK40_RS31240 SM00862 Transcriptional regulatory protein, C terminal AK40_RS31245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AK40_RS31245 SM00387 Histidine kinase-like ATPases AK40_RS31245 SM00388 His Kinase A (phosphoacceptor) domain AK40_RS31250 SM00345 helix_turn_helix gluconate operon transcriptional repressor AK40_RS31250 SM00895 AK40_RS31250 AK40_RS31320 SM00822 AK40_RS31320