locus-tag class description BC0001 PF11638 DnaA N-terminal domain BC0001 PF08299 Bacterial dnaA protein helix-turn-helix BC0001 PF00308 Bacterial dnaA protein BC0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BC0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BC0002 PF02767 DNA polymerase III beta subunit, central domain BC0004 PF02463 RecF/RecN/SMC N terminal domain BC0005 PF00204 DNA gyrase B BC0005 PF01751 Toprim domain BC0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC0005 PF00986 DNA gyrase B subunit, carboxyl terminus BC0006 PF00521 DNA gyrase/topoisomerase IV, subunit A BC0006 PF03989 DNA gyrase C-terminal domain, beta-propeller BC0012 PF14175 YaaC-like Protein BC0013 PF00571 CBS domain BC0013 PF00478 IMP dehydrogenase / GMP reductase domain BC0014 PF07943 Penicillin-binding protein 5, C-terminal domain BC0014 PF00768 D-alanyl-D-alanine carboxypeptidase BC0015 PF01680 SOR/SNZ family BC0016 PF01174 SNO glutamine amidotransferase family BC0017 PF02403 Seryl-tRNA synthetase N-terminal domain BC0017 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BC0021 PF01712 Deoxynucleoside kinase BC0022 PF00857 Isochorismatase family BC0023 PF14437 MafB19-like deaminase BC0024 PF12169 DNA polymerase III subunits gamma and tau domain III BC0025 PF02575 YbaB/EbfC DNA-binding family BC0026 PF02132 RecR protein BC0026 PF13662 Toprim domain BC0027 PF10704 Protein of unknown function (DUF2508) BC0028 PF07441 SigmaK-factor processing regulatory protein BofA BC0035 PF01276 Orn/Lys/Arg decarboxylase, major domain BC0035 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BC0036 PF02223 Thymidylate kinase BC0037 PF09115 DNA polymerase III, delta subunit, C terminal BC0038 PF04468 PSP1 C-terminal conserved region BC0039 PF06156 Initiation control protein YabA BC0040 PF05175 Methyltransferase small domain BC0041 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BC0042 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BC0042 PF18277 AbrB C-terminal domain BC0043 PF01588 Putative tRNA binding domain BC0043 PF09334 tRNA synthetases class I (M) BC0043 PF08264 Anticodon-binding domain of tRNA BC0044 PF01026 TatD related DNase BC0045 PF13331 Domain of unknown function (DUF4093) BC0045 PF13662 Toprim domain BC0046 PF00398 Ribosomal RNA adenine dimethylase BC0047 PF05582 YabG peptidase U57 BC0048 PF06257 Biofilm formation stimulator VEG BC0049 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC0050 PF08544 GHMP kinases C terminal BC0050 PF00288 GHMP kinases N terminal domain BC0051 PF09182 Bacterial purine repressor, N-terminal BC0051 PF00156 Phosphoribosyl transferase domain BC0052 PF01042 Endoribonuclease L-PSP BC0053 PF04026 SpoVG BC0054 PF00132 Bacterial transferase hexapeptide (six repeats) BC0054 PF00483 Nucleotidyl transferase BC0055 PF14572 Phosphoribosyl synthetase-associated domain BC0055 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BC0056 PF01195 Peptidyl-tRNA hydrolase BC0058 PF02559 CarD-like/TRCF domain BC0058 PF00270 DEAD/DEAH box helicase BC0058 PF00271 Helicase conserved C-terminal domain BC0058 PF03461 TRCF domain BC0058 PF17757 UvrB interaction domain BC0059 PF15714 Stage V sporulation protein T C-terminal, transcription factor BC0059 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BC0060 PF14667 Polysaccharide biosynthesis C-terminal domain BC0060 PF01943 Polysaccharide biosynthesis protein BC0061 PF03819 MazG nucleotide pyrophosphohydrolase domain BC0061 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BC0062 PF01479 S4 domain BC0063 PF07873 YabP family BC0064 PF09578 Spore cortex protein YabQ (Spore_YabQ) BC0066 PF00575 S1 RNA binding domain BC0069 PF07228 Stage II sporulation protein E (SpoIIE) BC0070 PF01171 PP-loop family BC0070 PF09179 TilS substrate binding domain BC0070 PF11734 TilS substrate C-terminal domain BC0071 PF00156 Phosphoribosyl transferase domain BC0072 PF01434 Peptidase family M41 BC0072 PF06480 FtsH Extracellular BC0072 PF17862 AAA+ lid domain BC0072 PF00004 ATPase family associated with various cellular activities (AAA) BC0073 PF03309 Type III pantothenate kinase BC0074 PF01430 Hsp33 protein BC0075 PF00291 Pyridoxal-phosphate dependent enzyme BC0076 PF04715 Anthranilate synthase component I, N terminal region BC0076 PF00425 chorismate binding enzyme BC0077 PF00117 Glutamine amidotransferase class-I BC0078 PF01063 Amino-transferase class IV BC0079 PF00809 Pterin binding enzyme BC0080 PF02152 Dihydroneopterin aldolase BC0081 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BC0082 PF01381 Helix-turn-helix BC0083 PF01207 Dihydrouridine synthase (Dus) BC0084 PF00152 tRNA synthetases class II (D, K and N) BC0084 PF01336 OB-fold nucleic acid binding domain BC0099 PF17727 CtsR C-terminal dimerization domain BC0099 PF05848 CtsR N-terminal HTH domain BC0100 PF02151 UvrB/uvrC motif BC0101 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BC0102 PF00004 ATPase family associated with various cellular activities (AAA) BC0102 PF07724 AAA domain (Cdc48 subfamily) BC0102 PF17871 AAA lid domain BC0102 PF02861 Clp amino terminal domain, pathogenicity island component BC0102 PF10431 C-terminal, D2-small domain, of ClpB protein BC0103 PF18073 Rubredoxin metal binding domain BC0104 PF02457 DisA bacterial checkpoint controller nucleotide-binding BC0104 PF10635 DisA bacterial checkpoint controller linker region BC0106 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BC0107 PF02542 YgbB family BC0108 PF00749 tRNA synthetases class I (E and Q), catalytic domain BC0109 PF00132 Bacterial transferase hexapeptide (six repeats) BC0109 PF06426 Serine acetyltransferase, N-terminal BC0110 PF01406 tRNA synthetases class I (C) catalytic domain BC0110 PF09190 DALR domain BC0111 PF00636 Ribonuclease III domain BC0112 PF00588 SpoU rRNA Methylase family BC0112 PF08032 RNA 2'-O ribose methyltransferase substrate binding BC0113 PF05991 YacP-like NYN domain BC0114 PF04542 Sigma-70 region 2 BC0114 PF08281 Sigma-70, region 4 BC0115 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BC0116 PF02357 Transcription termination factor nusG BC0116 PF00467 KOW motif BC0117 PF03946 Ribosomal protein L11, N-terminal domain BC0117 PF00298 Ribosomal protein L11, RNA binding domain BC0118 PF00687 Ribosomal protein L1p/L10e family BC0119 PF00466 Ribosomal protein L10 BC0120 PF16320 Ribosomal protein L7/L12 dimerisation domain BC0120 PF00542 Ribosomal protein L7/L12 C-terminal domain BC0121 PF05175 Methyltransferase small domain BC0122 PF04560 RNA polymerase Rpb2, domain 7 BC0122 PF04561 RNA polymerase Rpb2, domain 2 BC0122 PF00562 RNA polymerase Rpb2, domain 6 BC0122 PF10385 RNA polymerase beta subunit external 1 domain BC0122 PF04565 RNA polymerase Rpb2, domain 3 BC0122 PF04563 RNA polymerase beta subunit BC0123 PF04997 RNA polymerase Rpb1, domain 1 BC0123 PF00623 RNA polymerase Rpb1, domain 2 BC0123 PF04983 RNA polymerase Rpb1, domain 3 BC0123 PF05000 RNA polymerase Rpb1, domain 4 BC0123 PF04998 RNA polymerase Rpb1, domain 5 BC0124 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BC0125 PF00164 Ribosomal protein S12/S23 BC0126 PF00177 Ribosomal protein S7p/S5e BC0128 PF00679 Elongation factor G C-terminus BC0128 PF14492 Elongation Factor G, domain II BC0128 PF03764 Elongation factor G, domain IV BC0128 PF00009 Elongation factor Tu GTP binding domain BC0128 PF03144 Elongation factor Tu domain 2 BC0129 PF00009 Elongation factor Tu GTP binding domain BC0129 PF03144 Elongation factor Tu domain 2 BC0129 PF03143 Elongation factor Tu C-terminal domain BC0130 PF00338 Ribosomal protein S10p/S20e BC0131 PF00297 Ribosomal protein L3 BC0132 PF00573 Ribosomal protein L4/L1 family BC0133 PF00276 Ribosomal protein L23 BC0134 PF00181 Ribosomal Proteins L2, RNA binding domain BC0134 PF03947 Ribosomal Proteins L2, C-terminal domain BC0135 PF00203 Ribosomal protein S19 BC0136 PF00237 Ribosomal protein L22p/L17e BC0137 PF07650 KH domain BC0137 PF00189 Ribosomal protein S3, C-terminal domain BC0138 PF00252 Ribosomal protein L16p/L10e BC0139 PF00831 Ribosomal L29 protein BC0140 PF00366 Ribosomal protein S17 BC0141 PF00238 Ribosomal protein L14p/L23e BC0142 PF00467 KOW motif BC0142 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BC0143 PF00281 Ribosomal protein L5 BC0143 PF00673 ribosomal L5P family C-terminus BC0144 PF00253 Ribosomal protein S14p/S29e BC0145 PF00410 Ribosomal protein S8 BC0146 PF00347 Ribosomal protein L6 BC0147 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BC0148 PF03719 Ribosomal protein S5, C-terminal domain BC0148 PF00333 Ribosomal protein S5, N-terminal domain BC0149 PF00327 Ribosomal protein L30p/L7e BC0150 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BC0152 PF05191 Adenylate kinase, active site lid BC0153 PF00557 Metallopeptidase family M24 BC0154 PF01176 Translation initiation factor 1A / IF-1 BC0155 PF00444 Ribosomal protein L36 BC0156 PF00416 Ribosomal protein S13/S18 BC0157 PF00411 Ribosomal protein S11 BC0158 PF01000 RNA polymerase Rpb3/RpoA insert domain BC0158 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BC0158 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BC0159 PF01196 Ribosomal protein L17 BC0160 PF00005 ABC transporter BC0161 PF00005 ABC transporter BC0162 PF02361 Cobalt transport protein BC0163 PF01416 tRNA pseudouridine synthase BC0164 PF00572 Ribosomal protein L13 BC0165 PF00380 Ribosomal protein S9/S16 BC0167 PF01520 N-acetylmuramoyl-L-alanine amidase BC0168 PF10609 NUBPL iron-transfer P-loop NTPase BC0169 PF17898 Spore germination GerD central core domain BC0170 PF14089 KinB-signalling pathway activation in sporulation BC0171 PF01522 Polysaccharide deacetylase BC0184 PF02595 Glycerate kinase family BC0185 PF00491 Arginase family BC0186 PF02457 DisA bacterial checkpoint controller nucleotide-binding BC0187 PF07949 YbbR-like protein BC0188 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BC0188 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BC0188 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BC0188 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BC0190 PF01380 SIS domain BC0192 PF00326 Prolyl oligopeptidase family BC0192 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BC0196 PF00528 Binding-protein-dependent transport system inner membrane component BC0197 PF09383 NIL domain BC0197 PF00005 ABC transporter BC0198 PF03180 NLPA lipoprotein BC0199 PF00107 Zinc-binding dehydrogenase BC0199 PF08240 Alcohol dehydrogenase GroES-like domain BC0201 PF01565 FAD binding domain BC0202 PF07690 Major Facilitator Superfamily BC0204 PF07690 Major Facilitator Superfamily BC0207 PF00528 Binding-protein-dependent transport system inner membrane component BC0208 PF12911 N-terminal TM domain of oligopeptide transport permease C BC0208 PF00528 Binding-protein-dependent transport system inner membrane component BC0209 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC0209 PF00005 ABC transporter BC0210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC0210 PF00005 ABC transporter BC0211 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC0213 PF12833 Helix-turn-helix domain BC0215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC0216 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC0217 PF00248 Aldo/keto reductase family BC0218 PF14748 Pyrroline-5-carboxylate reductase dimerisation BC0218 PF03807 NADP oxidoreductase coenzyme F420-dependent BC0219 PF06800 Sugar transport protein BC0220 PF00528 Binding-protein-dependent transport system inner membrane component BC0222 PF12728 Helix-turn-helix domain BC0222 PF12727 PBP superfamily domain BC0224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC0224 PF03466 LysR substrate binding domain BC0225 PF00892 EamA-like transporter family BC0226 PF14142 YrzO-like protein BC0228 PF01553 Acyltransferase BC0230 PF00356 Bacterial regulatory proteins, lacI family BC0230 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BC0232 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC0232 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC0235 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BC0239 PF00005 ABC transporter BC0239 PF16326 ABC transporter C-terminal domain BC0239 PF12848 ABC transporter BC0241 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC0242 PF00528 Binding-protein-dependent transport system inner membrane component BC0243 PF00528 Binding-protein-dependent transport system inner membrane component BC0243 PF12911 N-terminal TM domain of oligopeptide transport permease C BC0244 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC0244 PF00005 ABC transporter BC0245 PF00005 ABC transporter BC0245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC0252 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC0253 PF01557 Fumarylacetoacetate (FAA) hydrolase family BC0255 PF13520 Amino acid permease BC0256 PF07690 Major Facilitator Superfamily BC0257 PF07478 D-ala D-ala ligase C-terminus BC0257 PF01820 D-ala D-ala ligase N-terminus BC0258 PF01225 Mur ligase family, catalytic domain BC0258 PF08245 Mur ligase middle domain BC0258 PF02875 Mur ligase family, glutamate ligase domain BC0259 PF00271 Helicase conserved C-terminal domain BC0259 PF00270 DEAD/DEAH box helicase BC0260 PF03851 UV-endonuclease UvdE BC0261 PF01694 Rhomboid family BC0262 PF01648 4'-phosphopantetheinyl transferase superfamily BC0264 PF01168 Alanine racemase, N-terminal domain BC0264 PF00842 Alanine racemase, C-terminal domain BC0265 PF01402 Ribbon-helix-helix protein, copG family BC0266 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BC0267 PF17674 HHH domain BC0267 PF16921 Tex protein YqgF-like domain BC0267 PF09371 Tex-like protein N-terminal domain BC0267 PF00575 S1 RNA binding domain BC0268 PF10263 SprT-like family BC0268 PF17283 SprT-like zinc ribbon domain BC0286 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BC0287 PF00814 Glycoprotease family BC0288 PF00583 Acetyltransferase (GNAT) family BC0289 PF00814 Glycoprotease family BC0290 PF12848 ABC transporter BC0290 PF16326 ABC transporter C-terminal domain BC0290 PF00005 ABC transporter BC0291 PF06971 Putative DNA-binding protein N-terminus BC0291 PF02629 CoA binding domain BC0293 PF02517 CPBP intramembrane metalloprotease BC0294 PF00166 Chaperonin 10 Kd subunit BC0295 PF00118 TCP-1/cpn60 chaperonin family BC0296 PF02540 NAD synthase BC0296 PF00117 Glutamine amidotransferase class-I BC0296 PF00958 GMP synthase C terminal domain BC0297 PF00860 Permease family BC0298 PF00072 Response regulator receiver domain BC0298 PF00486 Transcriptional regulatory protein, C terminal BC0299 PF16736 Single Cache-like BC0299 PF00989 PAS fold BC0299 PF00512 His Kinase A (phospho-acceptor) domain BC0299 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC0304 PF01323 DSBA-like thioredoxin domain BC0308 PF14307 Glycosyltransferase WbsX BC0308 PF05045 Rhamnan synthesis protein F BC0310 PF08241 Methyltransferase domain BC0312 PF16363 GDP-mannose 4,6 dehydratase BC0314 PF00535 Glycosyl transferase family 2 BC0318 PF00892 EamA-like transporter family BC0323 PF00731 AIR carboxylase BC0324 PF02222 ATP-grasp domain BC0324 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BC0325 PF00206 Lyase BC0325 PF10397 Adenylosuccinate lyase C-terminus BC0326 PF01259 SAICAR synthetase BC0327 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BC0329 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BC0329 PF02769 AIR synthase related protein, C-terminal domain BC0329 PF00586 AIR synthase related protein, N-terminal domain BC0330 PF00156 Phosphoribosyl transferase domain BC0331 PF00586 AIR synthase related protein, N-terminal domain BC0331 PF02769 AIR synthase related protein, C-terminal domain BC0332 PF00551 Formyl transferase BC0333 PF01808 AICARFT/IMPCHase bienzyme BC0333 PF02142 MGS-like domain BC0334 PF02843 Phosphoribosylglycinamide synthetase, C domain BC0334 PF02844 Phosphoribosylglycinamide synthetase, N domain BC0334 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BC0339 PF01884 PcrB family BC0340 PF13361 UvrD-like helicase C-terminal domain BC0340 PF00580 UvrD/REP helicase N-terminal domain BC0341 PF00533 BRCA1 C Terminus (BRCT) domain BC0341 PF01653 NAD-dependent DNA ligase adenylation domain BC0341 PF03120 NAD-dependent DNA ligase OB-fold domain BC0341 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BC0341 PF12826 Helix-hairpin-helix motif BC0342 PF07537 CamS sex pheromone cAM373 precursor BC0343 PF01925 Sulfite exporter TauE/SafE BC0344 PF00171 Aldehyde dehydrogenase family BC0345 PF00857 Isochorismatase family BC0346 PF09383 NIL domain BC0346 PF00005 ABC transporter BC0347 PF00528 Binding-protein-dependent transport system inner membrane component BC0348 PF03180 NLPA lipoprotein BC0349 PF05360 yiaA/B two helix domain BC0350 PF02686 Glu-tRNAGln amidotransferase C subunit BC0351 PF01425 Amidase BC0352 PF02934 GatB/GatE catalytic domain BC0352 PF02637 GatB domain BC0353 PF00781 Diacylglycerol kinase catalytic domain BC0354 PF13419 Haloacid dehalogenase-like hydrolase BC0355 PF00202 Aminotransferase class-III BC0356 PF00158 Sigma-54 interaction domain BC0357 PF00171 Aldehyde dehydrogenase family BC0358 PF00893 Small Multidrug Resistance protein BC0360 PF02073 Thermophilic metalloprotease (M29) BC0363 PF07670 Nucleoside recognition BC0363 PF01773 Na+ dependent nucleoside transporter N-terminus BC0363 PF07662 Na+ dependent nucleoside transporter C-terminus BC0364 PF13847 Methyltransferase domain BC0364 PF01938 TRAM domain BC0364 PF05958 tRNA (Uracil-5-)-methyltransferase BC0365 PF01207 Dihydrouridine synthase (Dus) BC0368 PF07308 Protein of unknown function (DUF1456) BC0371 PF13378 Enolase C-terminal domain-like BC0371 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BC0373 PF03553 Na+/H+ antiporter family BC0374 PF01546 Peptidase family M20/M25/M40 BC0374 PF07687 Peptidase dimerisation domain BC0376 PF13192 Thioredoxin domain BC0376 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC0377 PF00578 AhpC/TSA family BC0378 PF01636 Phosphotransferase enzyme family BC0379 PF01008 Initiation factor 2 subunit family BC0380 PF00596 Class II Aldolase and Adducin N-terminal domain BC0381 PF01032 FecCD transport family BC0382 PF01032 FecCD transport family BC0383 PF01497 Periplasmic binding protein BC0385 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC0388 PF12728 Helix-turn-helix domain BC0393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC0393 PF00512 His Kinase A (phospho-acceptor) domain BC0393 PF13426 PAS domain BC0393 PF00989 PAS fold BC0393 PF13188 PAS domain BC0397 PF10127 RNA repair pathway DNA polymerase beta family BC0398 PF07690 Major Facilitator Superfamily BC0399 PF00355 Rieske [2Fe-2S] domain BC0399 PF01266 FAD dependent oxidoreductase BC0401 PF00528 Binding-protein-dependent transport system inner membrane component BC0402 PF00497 Bacterial extracellular solute-binding proteins, family 3 BC0403 PF00005 ABC transporter BC0404 PF00672 HAMP domain BC0404 PF12729 Four helix bundle sensory module for signal transduction BC0404 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC0405 PF02863 Arginine repressor, C-terminal domain BC0405 PF01316 Arginine repressor, DNA binding domain BC0407 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BC0407 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BC0408 PF13520 Amino acid permease BC0409 PF00696 Amino acid kinase family BC0410 PF00027 Cyclic nucleotide-binding domain BC0410 PF13545 Crp-like helix-turn-helix domain BC0412 PF08031 Berberine and berberine like BC0412 PF01565 FAD binding domain BC0413 PF16657 Maltogenic Amylase, C-terminal domain BC0413 PF00128 Alpha amylase, catalytic domain BC0414 PF00367 phosphotransferase system, EIIB BC0414 PF02378 Phosphotransferase system, EIIC BC0414 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BC0415 PF03372 Endonuclease/Exonuclease/phosphatase family BC0416 PF01061 ABC-2 type transporter BC0417 PF01131 DNA topoisomerase BC0417 PF01751 Toprim domain BC0419 PF02110 Hydroxyethylthiazole kinase family BC0420 PF02581 Thiamine monophosphate synthase BC0421 PF03605 Anaerobic c4-dicarboxylate membrane transporter BC0422 PF00672 HAMP domain BC0422 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC0423 PF00550 Phosphopantetheine attachment site BC0423 PF07993 Male sterility protein BC0423 PF00668 Condensation domain BC0423 PF13193 AMP-binding enzyme C-terminal domain BC0423 PF00501 AMP-binding enzyme BC0424 PF01910 Thiamine-binding protein BC0425 PF00528 Binding-protein-dependent transport system inner membrane component BC0427 PF00005 ABC transporter BC0428 PF12848 ABC transporter BC0428 PF00005 ABC transporter BC0429 PF00041 Fibronectin type III domain BC0429 PF00704 Glycosyl hydrolases family 18 BC0433 PF00440 Bacterial regulatory proteins, tetR family BC0433 PF08360 QacR-like protein, C-terminal region BC0436 PF11700 Vacuole effluxer Atg22 like BC0439 PF09180 Prolyl-tRNA synthetase, C-terminal BC0439 PF03129 Anticodon binding domain BC0439 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BC0441 PF00480 ROK family BC0442 PF02342 TerD domain BC0443 PF02342 TerD domain BC0444 PF02342 TerD domain BC0445 PF03741 Integral membrane protein TerC family BC0446 PF14266 Putative component of 'biosynthetic module' BC0447 PF05816 Toxic anion resistance protein (TelA) BC0448 PF00689 Cation transporting ATPase, C-terminus BC0448 PF00690 Cation transporter/ATPase, N-terminus BC0449 PF06569 Protein of unknown function (DUF1128) BC0450 PF01451 Low molecular weight phosphotyrosine protein phosphatase BC0452 PF03631 Virulence factor BrkB BC0454 PF00892 EamA-like transporter family BC0456 PF10502 Signal peptidase, peptidase S26 BC0458 PF09335 SNARE associated Golgi protein BC0461 PF16242 Pyridoxamine 5'-phosphate oxidase like BC0462 PF01699 Sodium/calcium exchanger protein BC0463 PF14167 YfkD-like protein BC0464 PF08756 YfkB-like domain BC0464 PF04055 Radical SAM superfamily BC0466 PF05681 Fumarate hydratase (Fumerase) BC0466 PF05683 Fumarase C-terminus BC0467 PF01522 Polysaccharide deacetylase BC0468 PF00730 HhH-GPD superfamily base excision DNA repair protein BC0471 PF01416 tRNA pseudouridine synthase BC0473 PF00158 Sigma-54 interaction domain BC0473 PF13426 PAS domain BC0473 PF02954 Bacterial regulatory protein, Fis family BC0476 PF01546 Peptidase family M20/M25/M40 BC0476 PF07687 Peptidase dimerisation domain BC0481 PF04960 Glutaminase BC0482 PF00367 phosphotransferase system, EIIB BC0482 PF02378 Phosphotransferase system, EIIC BC0483 PF00144 Beta-lactamase BC0486 PF00535 Glycosyl transferase family 2 BC0487 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BC0487 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BC0487 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BC0488 PF00551 Formyl transferase BC0488 PF01370 NAD dependent epimerase/dehydratase family BC0488 PF02911 Formyl transferase, C-terminal domain BC0489 PF00535 Glycosyl transferase family 2 BC0491 PF02901 Pyruvate formate lyase-like BC0491 PF01228 Glycine radical BC0492 PF04055 Radical SAM superfamily BC0493 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BC0493 PF04101 Glycosyltransferase family 28 C-terminal domain BC0496 PF01979 Amidohydrolase family BC0497 PF08338 Domain of unknown function (DUF1731) BC0497 PF01370 NAD dependent epimerase/dehydratase family BC0498 PF02631 RecX family BC0501 PF08176 Small acid-soluble spore protein K family BC0502 PF14043 WVELL protein BC0503 PF04307 LexA-binding, inner membrane-associated putative hydrolase BC0504 PF14815 NUDIX domain BC0504 PF00730 HhH-GPD superfamily base excision DNA repair protein BC0506 PF04259 Small, acid-soluble spore protein, gamma-type BC0508 PF04167 Protein of unknown function (DUF402) BC0509 PF00005 ABC transporter BC0509 PF00664 ABC transporter transmembrane region BC0510 PF06081 Aromatic acid exporter family member 1 BC0511 PF01493 GXGXG motif BC0511 PF01645 Conserved region in glutamate synthase BC0511 PF04898 Glutamate synthase central domain BC0511 PF00310 Glutamine amidotransferases class-II BC0512 PF00202 Aminotransferase class-III BC0513 PF00005 ABC transporter BC0516 PF07885 Ion channel BC0517 PF00578 AhpC/TSA family BC0518 PF01475 Ferric uptake regulator family BC0520 PF11023 Zinc-ribbon containing domain BC0539 PF01709 Transcriptional regulator BC0540 PF00293 NUDIX domain BC0540 PF13344 Haloacid dehalogenase-like hydrolase BC0541 PF00905 Penicillin binding protein transpeptidase domain BC0541 PF00912 Transglycosylase BC0542 PF13462 Thioredoxin BC0544 PF08331 Domain of unknown function (DUF1730) BC0545 PF12671 Putative amidase domain BC0546 PF00588 SpoU rRNA Methylase family BC0547 PF00990 Diguanylate cyclase, GGDEF domain BC0547 PF03707 Bacterial signalling protein N terminal repeat BC0547 PF00563 EAL domain BC0548 PF08298 PrkA AAA domain BC0548 PF06798 PrkA serine protein kinase C-terminal domain BC0551 PF04285 Protein of unknown function (DUF444) BC0555 PF02028 BCCT, betaine/carnitine/choline family transporter BC0556 PF01752 Collagenase BC0556 PF18496 Collagenase G catalytic helper subdomain BC0556 PF08453 Peptidase family M9 N-terminal BC0558 PF15975 Flotillin BC0558 PF01145 SPFH domain / Band 7 family BC0559 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC0559 PF00672 HAMP domain BC0559 PF02743 Cache domain BC0560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC0560 PF00989 PAS fold BC0560 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BC0560 PF17203 Single cache domain 3 BC0561 PF12431 Transcriptional regulator BC0561 PF00072 Response regulator receiver domain BC0562 PF03600 Citrate transporter BC0566 PF04309 Glycerol-3-phosphate responsive antiterminator BC0567 PF17912 MalK OB fold domain BC0567 PF00005 ABC transporter BC0568 PF00528 Binding-protein-dependent transport system inner membrane component BC0569 PF00528 Binding-protein-dependent transport system inner membrane component BC0570 PF13416 Bacterial extracellular solute-binding protein BC0571 PF00149 Calcineurin-like phosphoesterase BC0572 PF00486 Transcriptional regulatory protein, C terminal BC0572 PF00072 Response regulator receiver domain BC0573 PF00512 His Kinase A (phospho-acceptor) domain BC0573 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC0575 PF13529 Peptidase_C39 like family BC0576 PF00672 HAMP domain BC0576 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC0576 PF02743 Cache domain BC0577 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC0577 PF00989 PAS fold BC0577 PF17203 Single cache domain 3 BC0577 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BC0578 PF00072 Response regulator receiver domain BC0579 PF03390 2-hydroxycarboxylate transporter family BC0580 PF03949 Malic enzyme, NAD binding domain BC0580 PF00390 Malic enzyme, N-terminal domain BC0582 PF00892 EamA-like transporter family BC0583 PF00392 Bacterial regulatory proteins, gntR family BC0583 PF00155 Aminotransferase class I and II BC0585 PF00512 His Kinase A (phospho-acceptor) domain BC0585 PF18698 Histidine kinase sensor domain BC0585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC0585 PF00672 HAMP domain BC0585 PF00989 PAS fold BC0586 PF00072 Response regulator receiver domain BC0586 PF00486 Transcriptional regulatory protein, C terminal BC0587 PF00583 Acetyltransferase (GNAT) family BC0587 PF13508 Acetyltransferase (GNAT) domain BC0588 PF02634 FdhD/NarQ family BC0589 PF00037 4Fe-4S binding domain BC0589 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BC0589 PF00384 Molybdopterin oxidoreductase BC0589 PF01568 Molydopterin dinucleotide binding domain BC0589 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BC0590 PF07849 Protein of unknown function (DUF1641) BC0592 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BC0592 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BC0593 PF13520 Amino acid permease BC0595 PF01022 Bacterial regulatory protein, arsR family BC0596 PF00403 Heavy-metal-associated domain BC0597 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BC0597 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BC0597 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BC0602 PF03413 Peptidase propeptide and YPEB domain BC0602 PF07504 Fungalysin/Thermolysin Propeptide Motif BC0602 PF02868 Thermolysin metallopeptidase, alpha-helical domain BC0602 PF01447 Thermolysin metallopeptidase, catalytic domain BC0606 PF04294 VanW like protein BC0607 PF03816 Cell envelope-related transcriptional attenuator domain BC0608 PF01773 Na+ dependent nucleoside transporter N-terminus BC0608 PF07662 Na+ dependent nucleoside transporter C-terminus BC0609 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC0610 PF03471 Transporter associated domain BC0610 PF00571 CBS domain BC0610 PF01595 Cyclin M transmembrane N-terminal domain BC0611 PF00206 Lyase BC0611 PF10415 Fumarase C C-terminus BC0612 PF02652 L-lactate permease BC0613 PF01022 Bacterial regulatory protein, arsR family BC0614 PF08141 Small acid-soluble spore protein H family BC0615 PF00854 POT family BC0616 PF01497 Periplasmic binding protein BC0618 PF01032 FecCD transport family BC0619 PF00005 ABC transporter BC0621 PF00155 Aminotransferase class I and II BC0622 PF01370 NAD dependent epimerase/dehydratase family BC0623 PF13344 Haloacid dehalogenase-like hydrolase BC0623 PF00293 NUDIX domain BC0624 PF00092 von Willebrand factor type A domain BC0625 PF07728 AAA domain (dynein-related subfamily) BC0626 PF13091 PLD-like domain BC0626 PF13396 Phospholipase_D-nuclease N-terminal BC0628 PF03707 Bacterial signalling protein N terminal repeat BC0628 PF00563 EAL domain BC0628 PF00990 Diguanylate cyclase, GGDEF domain BC0629 PF13520 Amino acid permease BC0630 PF00392 Bacterial regulatory proteins, gntR family BC0630 PF07702 UTRA domain BC0631 PF02378 Phosphotransferase system, EIIC BC0631 PF00367 phosphotransferase system, EIIB BC0632 PF16657 Maltogenic Amylase, C-terminal domain BC0632 PF00128 Alpha amylase, catalytic domain BC0635 PF03323 Bacillus/Clostridium GerA spore germination protein BC0637 PF01636 Phosphotransferase enzyme family BC0638 PF01235 Sodium:alanine symporter family BC0639 PF00005 ABC transporter BC0640 PF00497 Bacterial extracellular solute-binding proteins, family 3 BC0641 PF00528 Binding-protein-dependent transport system inner membrane component BC0642 PF00528 Binding-protein-dependent transport system inner membrane component BC0643 PF00324 Amino acid permease BC0649 PF13280 WYL domain BC0649 PF08279 HTH domain BC0650 PF01872 RibD C-terminal domain BC0651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC0651 PF00672 HAMP domain BC0651 PF00989 PAS fold BC0651 PF00512 His Kinase A (phospho-acceptor) domain BC0651 PF18698 Histidine kinase sensor domain BC0652 PF00486 Transcriptional regulatory protein, C terminal BC0652 PF00072 Response regulator receiver domain BC0654 PF01740 STAS domain BC0654 PF00916 Sulfate permease family BC0655 PF00582 Universal stress protein family BC0656 PF07690 Major Facilitator Superfamily BC0657 PF01047 MarR family BC0658 PF07690 Major Facilitator Superfamily BC0659 PF00356 Bacterial regulatory proteins, lacI family BC0660 PF00294 pfkB family carbohydrate kinase BC0661 PF05025 RbsD / FucU transport protein family BC0662 PF00005 ABC transporter BC0663 PF02653 Branched-chain amino acid transport system / permease component BC0665 PF00923 Transaldolase/Fructose-6-phosphate aldolase BC0666 PF05547 Immune inhibitor A peptidase M6 BC0668 PF08240 Alcohol dehydrogenase GroES-like domain BC0668 PF00107 Zinc-binding dehydrogenase BC0670 PF00882 Zinc dependent phospholipase C BC0671 PF03372 Endonuclease/Exonuclease/phosphatase family BC0677 PF02673 Bacitracin resistance protein BacA BC0678 PF02743 Cache domain BC0678 PF00672 HAMP domain BC0678 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC0679 PF07501 G5 domain BC0679 PF03990 G5-linked-Ubiquitin-like domain BC0679 PF06725 3D domain BC0680 PF01381 Helix-turn-helix BC0682 PF04203 Sortase domain BC0684 PF00854 POT family BC0685 PF05525 Branched-chain amino acid transport protein BC0688 PF00324 Amino acid permease BC0689 PF00860 Permease family BC0692 PF13673 Acetyltransferase (GNAT) domain BC0694 PF02254 TrkA-N domain BC0694 PF02080 TrkA-C domain BC0694 PF00999 Sodium/hydrogen exchanger family BC0696 PF00510 Cytochrome c oxidase subunit III BC0697 PF00115 Cytochrome C and Quinol oxidase polypeptide I BC0698 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BC0699 PF00324 Amino acid permease BC0700 PF13529 Peptidase_C39 like family BC0701 PF01546 Peptidase family M20/M25/M40 BC0701 PF07687 Peptidase dimerisation domain BC0702 PF11755 Protein of unknown function (DUF3311) BC0703 PF00474 Sodium:solute symporter family BC0705 PF03845 Spore germination protein BC0706 PF05504 Spore germination B3/ GerAC like, C-terminal BC0707 PF02421 Ferrous iron transport protein B BC0707 PF07670 Nucleoside recognition BC0707 PF07664 Ferrous iron transport protein B C terminus BC0707 PF17910 FeoB cytosolic helical domain BC0708 PF07670 Nucleoside recognition BC0708 PF02421 Ferrous iron transport protein B BC0708 PF07664 Ferrous iron transport protein B C terminus BC0708 PF17910 FeoB cytosolic helical domain BC0709 PF02421 Ferrous iron transport protein B BC0709 PF17910 FeoB cytosolic helical domain BC0709 PF07664 Ferrous iron transport protein B C terminus BC0709 PF04023 FeoA domain BC0709 PF07670 Nucleoside recognition BC0710 PF12849 PBP superfamily domain BC0711 PF00528 Binding-protein-dependent transport system inner membrane component BC0712 PF00528 Binding-protein-dependent transport system inner membrane component BC0714 PF00873 AcrB/AcrD/AcrF family BC0737 PF00571 CBS domain BC0740 PF00246 Zinc carboxypeptidase BC0740 PF08239 Bacterial SH3 domain BC0742 PF03070 TENA/THI-4/PQQC family BC0743 PF00005 ABC transporter BC0744 PF00528 Binding-protein-dependent transport system inner membrane component BC0745 PF09084 NMT1/THI5 like BC0746 PF02581 Thiamine monophosphate synthase BC0747 PF01266 FAD dependent oxidoreductase BC0748 PF02597 ThiS family BC0749 PF05690 Thiazole biosynthesis protein ThiG BC0750 PF00899 ThiF family BC0751 PF08543 Phosphomethylpyrimidine kinase BC0753 PF03814 Potassium-transporting ATPase A subunit BC0755 PF02669 K+-transporting ATPase, c chain BC0756 PF02702 Osmosensitive K+ channel His kinase sensor domain BC0757 PF07690 Major Facilitator Superfamily BC0758 PF01047 MarR family BC0764 PF00005 ABC transporter BC0766 PF02653 Branched-chain amino acid transport system / permease component BC0767 PF00005 ABC transporter BC0769 PF00860 Permease family BC0773 PF00294 pfkB family carbohydrate kinase BC0774 PF00251 Glycosyl hydrolases family 32 N-terminal domain BC0774 PF08244 Glycosyl hydrolases family 32 C terminal BC0775 PF00367 phosphotransferase system, EIIB BC0775 PF02378 Phosphotransferase system, EIIC BC0776 PF13407 Periplasmic binding protein domain BC0776 PF00356 Bacterial regulatory proteins, lacI family BC0778 PF00085 Thioredoxin BC0779 PF02600 Disulfide bond formation protein DsbB BC0780 PF14148 YhdB-like protein BC0782 PF03845 Spore germination protein BC0784 PF03323 Bacillus/Clostridium GerA spore germination protein BC0786 PF00881 Nitroreductase family BC0787 PF04293 SpoVR like protein BC0789 PF00089 Trypsin BC0791 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BC0791 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC0792 PF02583 Metal-sensitive transcriptional repressor BC0793 PF00581 Rhodanese-like domain BC0793 PF01206 Sulfurtransferase TusA BC0794 PF00581 Rhodanese-like domain BC0794 PF00753 Metallo-beta-lactamase superfamily BC0795 PF01206 Sulfurtransferase TusA BC0796 PF00581 Rhodanese-like domain BC0796 PF01206 Sulfurtransferase TusA BC0797 PF00581 Rhodanese-like domain BC0798 PF13686 DsrE/DsrF/DrsH-like family BC0799 PF01925 Sulfite exporter TauE/SafE BC0801 PF03816 Cell envelope-related transcriptional attenuator domain BC0802 PF08240 Alcohol dehydrogenase GroES-like domain BC0802 PF00107 Zinc-binding dehydrogenase BC0803 PF02690 Na+/Pi-cotransporter BC0804 PF07690 Major Facilitator Superfamily BC0806 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BC0806 PF00874 PRD domain BC0806 PF05043 Mga helix-turn-helix domain BC0806 PF08279 HTH domain BC0807 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BC0808 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BC0809 PF02378 Phosphotransferase system, EIIC BC0813 PF01476 LysM domain BC0813 PF06725 3D domain BC0814 PF02687 FtsX-like permease family BC0814 PF12704 MacB-like periplasmic core domain BC0815 PF00005 ABC transporter BC0817 PF09529 Integral membrane protein (intg_mem_TP0381) BC0820 PF05525 Branched-chain amino acid transport protein BC0821 PF05067 Manganese containing catalase BC0822 PF12652 CotJB protein BC0823 PF11007 Spore coat associated protein JA (CotJA) BC0826 PF02735 Ku70/Ku80 beta-barrel domain BC0828 PF09335 SNARE associated Golgi protein BC0838 PF00999 Sodium/hydrogen exchanger family BC0840 PF01380 SIS domain BC0840 PF01418 Helix-turn-helix domain, rpiR family BC0841 PF13580 SIS domain BC0842 PF02378 Phosphotransferase system, EIIC BC0842 PF00367 phosphotransferase system, EIIB BC0844 PF07681 DoxX BC0847 PF00892 EamA-like transporter family BC0848 PF01037 Lrp/AsnC ligand binding domain BC0849 PF14698 Argininosuccinate lyase C-terminal BC0849 PF00206 Lyase BC0849 PF00583 Acetyltransferase (GNAT) family BC0851 PF13411 MerR HTH family regulatory protein BC0852 PF00893 Small Multidrug Resistance protein BC0854 PF17934 Tetracyclin repressor-like, C-terminal domain BC0854 PF00440 Bacterial regulatory proteins, tetR family BC0855 PF07690 Major Facilitator Superfamily BC0856 PF01638 HxlR-like helix-turn-helix BC0858 PF02525 Flavodoxin-like fold BC0859 PF12793 Sugar transport-related sRNA regulator N-term BC0859 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC0860 PF07690 Major Facilitator Superfamily BC0862 PF01965 DJ-1/PfpI family BC0863 PF18011 C-terminal domain found in long catalases BC0863 PF06628 Catalase-related immune-responsive BC0863 PF00199 Catalase BC0865 PF13520 Amino acid permease BC0866 PF01177 Asp/Glu/Hydantoin racemase BC0868 PF00171 Aldehyde dehydrogenase family BC0870 PF00664 ABC transporter transmembrane region BC0870 PF00005 ABC transporter BC0871 PF00664 ABC transporter transmembrane region BC0871 PF00005 ABC transporter BC0872 PF00497 Bacterial extracellular solute-binding proteins, family 3 BC0873 PF00528 Binding-protein-dependent transport system inner membrane component BC0874 PF00005 ABC transporter BC0875 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC0877 PF14398 YheC/D like ATP-grasp BC0879 PF04286 Protein of unknown function (DUF445) BC0880 PF06133 Control of competence regulator ComK, YlbF/YmcA BC0881 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC0881 PF07730 Histidine kinase BC0882 PF00072 Response regulator receiver domain BC0882 PF00196 Bacterial regulatory proteins, luxR family BC0883 PF00205 Thiamine pyrophosphate enzyme, central domain BC0883 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BC0883 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BC0884 PF03306 Alpha-acetolactate decarboxylase BC0885 PF02245 Methylpurine-DNA glycosylase (MPG) BC0887 PF04650 YSIRK type signal peptide BC0887 PF10425 C-terminus of bacterial fibrinogen-binding adhesin BC0887 PF17210 SdrD B-like domain BC0887 PF00746 LPXTG cell wall anchor motif BC0887 PF17961 Bacterial Ig domain BC0888 PF01471 Putative peptidoglycan binding domain BC0888 PF01510 N-acetylmuramoyl-L-alanine amidase BC0889 PF04055 Radical SAM superfamily BC0890 PF00501 AMP-binding enzyme BC0890 PF13193 AMP-binding enzyme C-terminal domain BC0893 PF01740 STAS domain BC0893 PF00916 Sulfate permease family BC0894 PF14667 Polysaccharide biosynthesis C-terminal domain BC0894 PF01943 Polysaccharide biosynthesis protein BC0898 PF00378 Enoyl-CoA hydratase/isomerase BC0901 PF05343 M42 glutamyl aminopeptidase BC0902 PF01520 N-acetylmuramoyl-L-alanine amidase BC0902 PF00395 S-layer homology domain BC0904 PF11121 Protein of unknown function (DUF2639) BC0905 PF05544 Proline racemase BC0906 PF02423 Ornithine cyclodeaminase/mu-crystallin family BC0907 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC0908 PF00528 Binding-protein-dependent transport system inner membrane component BC0909 PF00528 Binding-protein-dependent transport system inner membrane component BC0909 PF12911 N-terminal TM domain of oligopeptide transport permease C BC0910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC0910 PF00005 ABC transporter BC0911 PF00005 ABC transporter BC0911 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC0913 PF00753 Metallo-beta-lactamase superfamily BC0913 PF16123 Hydroxyacylglutathione hydrolase C-terminus BC0918 PF06013 Proteins of 100 residues with WXG BC0920 PF14436 Bacterial EndoU nuclease BC0920 PF04740 LXG domain of WXG superfamily BC0935 PF00083 Sugar (and other) transporter BC0936 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC0936 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BC0937 PF00072 Response regulator receiver domain BC0937 PF12431 Transcriptional regulator BC0937 PF08279 HTH domain BC0938 PF03401 Tripartite tricarboxylate transporter family receptor BC0939 PF07728 AAA domain (dynein-related subfamily) BC0940 PF09563 LlaJI restriction endonuclease BC0941 PF00145 C-5 cytosine-specific DNA methylase BC0945 PF00589 Phage integrase family BC0945 PF14659 Phage integrase, N-terminal SAM-like domain BC0953 PF13411 MerR HTH family regulatory protein BC0953 PF06445 GyrI-like small molecule binding domain BC0956 PF00772 DnaB-like helicase N terminal domain BC0956 PF03796 DnaB-like helicase C terminal domain BC0959 PF01925 Sulfite exporter TauE/SafE BC0962 PF07690 Major Facilitator Superfamily BC0964 PF13302 Acetyltransferase (GNAT) domain BC0968 PF12146 Serine aminopeptidase, S33 BC0968 PF13026 Protein of unknown function (DUF3887) BC0976 PF01066 CDP-alcohol phosphatidyltransferase BC0979 PF02733 Dak1 domain BC0981 PF02733 Dak1 domain BC0983 PF17443 Uncharacterized protein pXO2-72 BC0986 PF18801 response regulator aspartate phosphatase H, N terminal BC0986 PF13176 Tetratricopeptide repeat BC0991 PF00395 S-layer homology domain BC0998 PF11181 Heat induced stress protein YflT BC0999 PF05532 CsbD-like BC1002 PF01740 STAS domain BC1003 PF13581 Histidine kinase-like ATPase domain BC1004 PF04545 Sigma-70, region 4 BC1004 PF04539 Sigma-70 region 3 BC1004 PF04542 Sigma-70 region 2 BC1006 PF13426 PAS domain BC1006 PF07228 Stage II sporulation protein E (SpoIIE) BC1007 PF01739 CheR methyltransferase, SAM binding domain BC1007 PF03705 CheR methyltransferase, all-alpha domain BC1008 PF00672 HAMP domain BC1008 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BC1008 PF00072 Response regulator receiver domain BC1008 PF01627 Hpt domain BC1008 PF00512 His Kinase A (phospho-acceptor) domain BC1008 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1012 PF01906 Putative heavy-metal-binding BC1015 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BC1016 PF11121 Protein of unknown function (DUF2639) BC1019 PF00149 Calcineurin-like phosphoesterase BC1020 PF13514 AAA domain BC1021 PF01336 OB-fold nucleic acid binding domain BC1021 PF01966 HD domain BC1023 PF01810 LysE type translocator BC1024 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC1025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC1026 PF18801 response regulator aspartate phosphatase H, N terminal BC1027 PF08386 TAP-like protein BC1027 PF00561 alpha/beta hydrolase fold BC1028 PF14147 Sporulation protein YhaL BC1031 PF00190 Cupin BC1032 PF01381 Helix-turn-helix BC1033 PF04309 Glycerol-3-phosphate responsive antiterminator BC1034 PF00230 Major intrinsic protein BC1035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BC1035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BC1036 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BC1036 PF01266 FAD dependent oxidoreductase BC1037 PF03551 Transcriptional regulator PadR-like family BC1041 PF13538 UvrD-like helicase C-terminal domain BC1047 PF01047 MarR family BC1048 PF12732 YtxH-like protein BC1049 PF01230 HIT domain BC1050 PF00005 ABC transporter BC1051 PF05975 Bacterial ABC transporter protein EcsB BC1052 PF12787 EcsC protein family BC1055 PF03703 Bacterial PH domain BC1056 PF03703 Bacterial PH domain BC1061 PF10014 2OG-Fe dioxygenase BC1063 PF00892 EamA-like transporter family BC1064 PF03703 Bacterial PH domain BC1065 PF03703 Bacterial PH domain BC1066 PF03992 Antibiotic biosynthesis monooxygenase BC1067 PF00912 Transglycosylase BC1067 PF00905 Penicillin binding protein transpeptidase domain BC1068 PF01208 Uroporphyrinogen decarboxylase (URO-D) BC1069 PF00762 Ferrochelatase BC1070 PF01593 Flavin containing amine oxidoreductase BC1075 PF03965 Penicillinase repressor BC1077 PF17932 Tetracyclin repressor-like, C-terminal domain BC1077 PF00440 Bacterial regulatory proteins, tetR family BC1082 PF13302 Acetyltransferase (GNAT) domain BC1083 PF00356 Bacterial regulatory proteins, lacI family BC1084 PF14149 YhfH-like protein BC1085 PF12706 Beta-lactamase superfamily domain BC1086 PF10437 Bacterial lipoate protein ligase C-terminus BC1086 PF03099 Biotin/lipoate A/B protein ligase family BC1088 PF00501 AMP-binding enzyme BC1088 PF13193 AMP-binding enzyme C-terminal domain BC1089 PF00395 S-layer homology domain BC1089 PF01520 N-acetylmuramoyl-L-alanine amidase BC1092 PF00528 Binding-protein-dependent transport system inner membrane component BC1093 PF00528 Binding-protein-dependent transport system inner membrane component BC1094 PF17850 CysA C-terminal regulatory domain BC1094 PF12857 TOBE-like domain BC1094 PF00005 ABC transporter BC1110 PF07968 Leukocidin/Hemolysin toxin family BC1111 PF00149 Calcineurin-like phosphoesterase BC1112 PF01966 HD domain BC1114 PF04542 Sigma-70 region 2 BC1114 PF08281 Sigma-70, region 4 BC1115 PF06445 GyrI-like small molecule binding domain BC1115 PF12833 Helix-turn-helix domain BC1118 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1118 PF00512 His Kinase A (phospho-acceptor) domain BC1119 PF00486 Transcriptional regulatory protein, C terminal BC1119 PF00072 Response regulator receiver domain BC1123 PF01435 Peptidase family M48 BC1123 PF16491 CAAX prenyl protease N-terminal, five membrane helices BC1124 PF02743 Cache domain BC1124 PF00672 HAMP domain BC1124 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC1125 PF00395 S-layer homology domain BC1125 PF00331 Glycosyl hydrolase family 10 BC1125 PF02018 Carbohydrate binding domain BC1125 PF06452 Carbohydrate family 9 binding domain-like BC1127 PF01274 Malate synthase BC1128 PF00463 Isocitrate lyase family BC1131 PF00313 'Cold-shock' DNA-binding domain BC1135 PF09335 SNARE associated Golgi protein BC1136 PF10502 Signal peptidase, peptidase S26 BC1137 PF13361 UvrD-like helicase C-terminal domain BC1137 PF12705 PD-(D/E)XK nuclease superfamily BC1138 PF13361 UvrD-like helicase C-terminal domain BC1138 PF00580 UvrD/REP helicase N-terminal domain BC1138 PF12705 PD-(D/E)XK nuclease superfamily BC1140 PF10676 Spore germination protein gerPA/gerPF BC1141 PF10970 Spore germination protein GerPE BC1143 PF10737 Spore germination protein GerPC BC1144 PF10803 Spore germination GerPB BC1145 PF10676 Spore germination protein gerPA/gerPF BC1146 PF09388 Spo0E like sporulation regulatory protein BC1147 PF01557 Fumarylacetoacetate (FAA) hydrolase family BC1149 PF00202 Aminotransferase class-III BC1150 PF07457 Protein of unknown function (DUF1516) BC1154 PF00762 Ferrochelatase BC1155 PF00199 Catalase BC1155 PF06628 Catalase-related immune-responsive BC1156 PF00909 Ammonium Transporter Family BC1157 PF00128 Alpha amylase, catalytic domain BC1159 PF04461 Protein of unknown function (DUF520) BC1160 PF17783 CvfB-like winged helix domain BC1160 PF13509 S1 domain BC1163 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC1163 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC1164 PF12758 Protein of unknown function (DUF3813) BC1167 PF14168 YjzC-like protein BC1168 PF17871 AAA lid domain BC1168 PF07724 AAA domain (Cdc48 subfamily) BC1168 PF02861 Clp amino terminal domain, pathogenicity island component BC1168 PF10431 C-terminal, D2-small domain, of ClpB protein BC1168 PF00004 ATPase family associated with various cellular activities (AAA) BC1172 PF10815 ComZ BC1173 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BC1173 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BC1174 PF02801 Beta-ketoacyl synthase, C-terminal domain BC1174 PF00109 Beta-ketoacyl synthase, N-terminal domain BC1175 PF10026 Predicted Zn-dependent protease (DUF2268) BC1176 PF12227 Protein of unknown function (DUF3603) BC1179 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC1180 PF00528 Binding-protein-dependent transport system inner membrane component BC1181 PF00528 Binding-protein-dependent transport system inner membrane component BC1181 PF12911 N-terminal TM domain of oligopeptide transport permease C BC1182 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC1182 PF00005 ABC transporter BC1183 PF00005 ABC transporter BC1183 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC1184 PF01554 MatE BC1185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC1188 PF03960 ArsC family BC1189 PF03741 Integral membrane protein TerC family BC1190 PF05389 Negative regulator of genetic competence (MecA) BC1191 PF13091 PLD-like domain BC1191 PF13396 Phospholipase_D-nuclease N-terminal BC1193 PF08439 Oligopeptidase F BC1193 PF01432 Peptidase family M3 BC1195 PF01152 Bacterial-like globin BC1196 PF01928 CYTH domain BC1198 PF04607 Region found in RelA / SpoT proteins BC1199 PF01513 ATP-NAD kinase BC1200 PF00849 RNA pseudouridylate synthase BC1202 PF00149 Calcineurin-like phosphoesterase BC1203 PF01098 Cell cycle protein BC1204 PF00535 Glycosyl transferase family 2 BC1205 PF08241 Methyltransferase domain BC1206 PF05711 Macrocin-O-methyltransferase (TylF) BC1208 PF00535 Glycosyl transferase family 2 BC1208 PF13181 Tetratricopeptide repeat BC1212 PF00483 Nucleotidyl transferase BC1213 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BC1214 PF16363 GDP-mannose 4,6 dehydratase BC1215 PF04321 RmlD substrate binding domain BC1219 PF07098 Protein of unknown function (DUF1360) BC1223 PF13361 UvrD-like helicase C-terminal domain BC1223 PF00580 UvrD/REP helicase N-terminal domain BC1224 PF13673 Acetyltransferase (GNAT) domain BC1226 PF00756 Putative esterase BC1230 PF02368 Bacterial Ig-like domain (group 2) BC1231 PF00474 Sodium:solute symporter family BC1232 PF04715 Anthranilate synthase component I, N terminal region BC1232 PF00425 chorismate binding enzyme BC1233 PF02885 Glycosyl transferase family, helical bundle domain BC1233 PF00591 Glycosyl transferase family, a/b domain BC1233 PF00117 Glutamine amidotransferase class-I BC1234 PF02885 Glycosyl transferase family, helical bundle domain BC1234 PF00591 Glycosyl transferase family, a/b domain BC1235 PF00218 Indole-3-glycerol phosphate synthase BC1236 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BC1237 PF00291 Pyridoxal-phosphate dependent enzyme BC1238 PF00290 Tryptophan synthase alpha chain BC1240 PF02652 L-lactate permease BC1241 PF10042 Uncharacterized conserved protein (DUF2278) BC1246 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BC1246 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC1248 PF00881 Nitroreductase family BC1251 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BC1251 PF02817 e3 binding domain BC1251 PF00364 Biotin-requiring enzyme BC1252 PF00676 Dehydrogenase E1 component BC1252 PF16870 2-oxoglutarate dehydrogenase C-terminal BC1252 PF02779 Transketolase, pyrimidine binding domain BC1253 PF01381 Helix-turn-helix BC1267 PF13037 Domain of unknown function (DUF3898) BC1267 PF13039 Protein of unknown function (DUF3900) BC1272 PF14659 Phage integrase, N-terminal SAM-like domain BC1272 PF00589 Phage integrase family BC1277 PF00768 D-alanyl-D-alanine carboxypeptidase BC1277 PF07943 Penicillin-binding protein 5, C-terminal domain BC1279 PF12389 Camelysin metallo-endopeptidase BC1281 PF12389 Camelysin metallo-endopeptidase BC1282 PF08671 Anti-repressor SinI BC1282 PF01381 Helix-turn-helix BC1284 PF05547 Immune inhibitor A peptidase M6 BC1285 PF00171 Aldehyde dehydrogenase family BC1286 PF00005 ABC transporter BC1286 PF08402 TOBE domain BC1287 PF00528 Binding-protein-dependent transport system inner membrane component BC1288 PF00528 Binding-protein-dependent transport system inner membrane component BC1289 PF13416 Bacterial extracellular solute-binding protein BC1290 PF01569 PAP2 superfamily BC1291 PF03176 MMPL family BC1293 PF01479 S4 domain BC1293 PF00849 RNA pseudouridylate synthase BC1295 PF00188 Cysteine-rich secretory protein family BC1296 PF02754 Cysteine-rich domain BC1296 PF13183 4Fe-4S dicluster domain BC1297 PF02913 FAD linked oxidases, C-terminal domain BC1297 PF01565 FAD binding domain BC1298 PF17853 GGDEF-like domain BC1298 PF05651 Putative sugar diacid recognition BC1298 PF13556 PucR C-terminal helix-turn-helix domain BC1300 PF00072 Response regulator receiver domain BC1300 PF00486 Transcriptional regulatory protein, C terminal BC1301 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1301 PF18698 Histidine kinase sensor domain BC1301 PF00512 His Kinase A (phospho-acceptor) domain BC1301 PF00989 PAS fold BC1301 PF00672 HAMP domain BC1302 PF07729 FCD domain BC1302 PF00392 Bacterial regulatory proteins, gntR family BC1303 PF02754 Cysteine-rich domain BC1304 PF02589 LUD domain BC1304 PF11870 Domain of unknown function (DUF3390) BC1304 PF13183 4Fe-4S dicluster domain BC1305 PF02589 LUD domain BC1306 PF01478 Type IV leader peptidase family BC1306 PF06750 Bacterial Peptidase A24 N-terminal domain BC1308 PF01226 Formate/nitrite transporter BC1309 PF03741 Integral membrane protein TerC family BC1310 PF02386 Cation transport protein BC1311 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC1312 PF01575 MaoC like domain BC1318 PF00561 alpha/beta hydrolase fold BC1320 PF02386 Cation transport protein BC1324 PF08402 TOBE domain BC1324 PF00005 ABC transporter BC1325 PF00528 Binding-protein-dependent transport system inner membrane component BC1326 PF13419 Haloacid dehalogenase-like hydrolase BC1327 PF00266 Aminotransferase class-V BC1329 PF00455 DeoR C terminal sensor domain BC1329 PF08220 DeoR-like helix-turn-helix domain BC1334 PF04748 Divergent polysaccharide deacetylase BC1335 PF09388 Spo0E like sporulation regulatory protein BC1336 PF02743 Cache domain BC1336 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1336 PF00512 His Kinase A (phospho-acceptor) domain BC1337 PF01047 MarR family BC1339 PF12867 DinB superfamily BC1340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1340 PF00989 PAS fold BC1340 PF13188 PAS domain BC1340 PF13426 PAS domain BC1340 PF00512 His Kinase A (phospho-acceptor) domain BC1341 PF06508 Queuosine biosynthesis protein QueC BC1342 PF01242 6-pyruvoyl tetrahydropterin synthase BC1343 PF04055 Radical SAM superfamily BC1344 PF14489 QueF-like protein BC1345 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BC1353 PF07972 NrdI Flavodoxin like BC1354 PF08343 Ribonucleotide reductase N-terminal BC1354 PF00317 Ribonucleotide reductase, all-alpha domain BC1354 PF02867 Ribonucleotide reductase, barrel domain BC1355 PF00268 Ribonucleotide reductase, small chain BC1356 PF00392 Bacterial regulatory proteins, gntR family BC1357 PF00005 ABC transporter BC1359 PF00005 ABC transporter BC1361 PF02517 CPBP intramembrane metalloprotease BC1363 PF01037 Lrp/AsnC ligand binding domain BC1365 PF00857 Isochorismatase family BC1367 PF02016 LD-carboxypeptidase N-terminal domain BC1367 PF17676 LD-carboxypeptidase C-terminal domain BC1368 PF03060 Nitronate monooxygenase BC1369 PF04914 DltD protein BC1370 PF00550 Phosphopantetheine attachment site BC1371 PF03062 MBOAT, membrane-bound O-acyltransferase family BC1372 PF13193 AMP-binding enzyme C-terminal domain BC1372 PF00501 AMP-binding enzyme BC1374 PF01546 Peptidase family M20/M25/M40 BC1374 PF07687 Peptidase dimerisation domain BC1376 PF00258 Flavodoxin BC1383 PF01554 MatE BC1384 PF02673 Bacitracin resistance protein BacA BC1387 PF01047 MarR family BC1389 PF00375 Sodium:dicarboxylate symporter family BC1390 PF02386 Cation transport protein BC1392 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BC1394 PF03698 Uncharacterised protein family (UPF0180) BC1396 PF01063 Amino-transferase class IV BC1398 PF01842 ACT domain BC1398 PF10369 Small subunit of acetolactate synthase BC1399 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BC1399 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BC1400 PF08502 LeuA allosteric (dimerisation) domain BC1400 PF00682 HMGL-like BC1401 PF00180 Isocitrate/isopropylmalate dehydrogenase BC1402 PF00330 Aconitase family (aconitate hydratase) BC1403 PF00694 Aconitase C-terminal domain BC1404 PF13393 Histidyl-tRNA synthetase BC1405 PF01634 ATP phosphoribosyltransferase BC1406 PF00815 Histidinol dehydrogenase BC1407 PF00475 Imidazoleglycerol-phosphate dehydratase BC1408 PF00117 Glutamine amidotransferase class-I BC1409 PF00977 Histidine biosynthesis protein BC1410 PF00977 Histidine biosynthesis protein BC1411 PF01502 Phosphoribosyl-AMP cyclohydrolase BC1412 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BC1413 PF02811 PHP domain BC1415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BC1415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BC1416 PF01066 CDP-alcohol phosphatidyltransferase BC1417 PF00884 Sulfatase BC1419 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BC1419 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BC1421 PF01507 Phosphoadenosine phosphosulfate reductase family BC1422 PF14306 PUA-like domain BC1422 PF01747 ATP-sulfurylase BC1424 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BC1424 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BC1426 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BC1427 PF01903 CbiX BC1430 PF00209 Sodium:neurotransmitter symporter family BC1432 PF00375 Sodium:dicarboxylate symporter family BC1434 PF03553 Na+/H+ antiporter family BC1437 PF09922 Cell wall-active antibiotics response 4TMS YvqF BC1438 PF00672 HAMP domain BC1438 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1438 PF07730 Histidine kinase BC1439 PF00196 Bacterial regulatory proteins, luxR family BC1439 PF00072 Response regulator receiver domain BC1441 PF05525 Branched-chain amino acid transport protein BC1443 PF01209 ubiE/COQ5 methyltransferase family BC1448 PF00175 Oxidoreductase NAD-binding domain BC1448 PF00042 Globin BC1448 PF00970 Oxidoreductase FAD-binding domain BC1452 PF01925 Sulfite exporter TauE/SafE BC1453 PF01384 Phosphate transporter family BC1454 PF01865 Protein of unknown function DUF47 BC1455 PF00912 Transglycosylase BC1455 PF00905 Penicillin binding protein transpeptidase domain BC1458 PF00989 PAS fold BC1458 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1458 PF00512 His Kinase A (phospho-acceptor) domain BC1459 PF01904 Protein of unknown function DUF72 BC1461 PF00589 Phage integrase family BC1463 PF01048 Phosphorylase superfamily BC1465 PF09924 Uncharacterised conserved protein (DUF2156) BC1465 PF03706 Lysylphosphatidylglycerol synthase TM region BC1468 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BC1468 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BC1469 PF00768 D-alanyl-D-alanine carboxypeptidase BC1469 PF07943 Penicillin-binding protein 5, C-terminal domain BC1470 PF07670 Nucleoside recognition BC1471 PF07670 Nucleoside recognition BC1472 PF00849 RNA pseudouridylate synthase BC1472 PF01479 S4 domain BC1473 PF00578 AhpC/TSA family BC1476 PF01578 Cytochrome C assembly protein BC1477 PF00486 Transcriptional regulatory protein, C terminal BC1477 PF00072 Response regulator receiver domain BC1478 PF00989 PAS fold BC1478 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1478 PF00672 HAMP domain BC1478 PF00512 His Kinase A (phospho-acceptor) domain BC1478 PF18698 Histidine kinase sensor domain BC1479 PF01923 Cobalamin adenosyltransferase BC1482 PF12822 ECF transporter, substrate-specific component BC1485 PF00270 DEAD/DEAH box helicase BC1485 PF00271 Helicase conserved C-terminal domain BC1486 PF02517 CPBP intramembrane metalloprotease BC1488 PF00149 Calcineurin-like phosphoesterase BC1489 PF13411 MerR HTH family regulatory protein BC1490 PF05389 Negative regulator of genetic competence (MecA) BC1491 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BC1491 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BC1496 PF17763 Glutaminase/Asparaginase C-terminal domain BC1496 PF00710 Asparaginase, N-terminal BC1497 PF02224 Cytidylate kinase BC1498 PF00575 S1 RNA binding domain BC1499 PF01070 FMN-dependent dehydrogenase BC1500 PF14140 YpzI-like protein BC1502 PF14045 YIEGIA protein BC1504 PF01926 50S ribosome-binding GTPase BC1504 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BC1505 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BC1505 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BC1507 PF10966 Protein of unknown function (DUF2768) BC1509 PF09547 Stage IV sporulation protein A (spore_IV_A) BC1510 PF00216 Bacterial DNA-binding protein BC1511 PF01227 GTP cyclohydrolase I BC1512 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BC1513 PF01209 ubiE/COQ5 methyltransferase family BC1514 PF00348 Polyprenyl synthetase BC1515 PF00334 Nucleoside diphosphate kinase BC1516 PF01264 Chorismate synthase BC1517 PF01761 3-dehydroquinate synthase BC1518 PF00155 Aminotransferase class I and II BC1520 PF08858 IDEAL domain BC1520 PF08864 UPF0302 domain BC1521 PF10673 Protein of unknown function (DUF2487) BC1522 PF00355 Rieske [2Fe-2S] domain BC1523 PF00033 Cytochrome b/b6/petB BC1524 PF00032 Cytochrome b(C-terminal)/b6/petD BC1524 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BC1525 PF07187 Protein of unknown function (DUF1405) BC1527 PF09577 Sporulation protein YpjB (SpoYpjB) BC1528 PF04298 Putative neutral zinc metallopeptidase BC1530 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC1530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC1531 PF03819 MazG nucleotide pyrophosphohydrolase domain BC1532 PF05173 Dihydrodipicolinate reductase, C-terminus BC1532 PF01113 Dihydrodipicolinate reductase, N-terminus BC1533 PF02142 MGS-like domain BC1534 PF02585 GlcNAc-PI de-N-acetylase BC1535 PF00534 Glycosyl transferases group 1 BC1535 PF13439 Glycosyltransferase Family 4 BC1536 PF01743 Poly A polymerase head domain BC1536 PF12627 Probable RNA and SrmB- binding site of polymerase A BC1536 PF13735 tRNA nucleotidyltransferase domain 2 putative BC1537 PF08279 HTH domain BC1537 PF03099 Biotin/lipoate A/B protein ligase family BC1537 PF02237 Biotin protein ligase C terminal domain BC1540 PF02548 Ketopantoate hydroxymethyltransferase BC1541 PF02569 Pantoate-beta-alanine ligase BC1542 PF02261 Aspartate decarboxylase BC1544 PF14084 Protein of unknown function (DUF4264) BC1546 PF00155 Aminotransferase class I and II BC1547 PF07261 Replication initiation and membrane attachment BC1548 PF00730 HhH-GPD superfamily base excision DNA repair protein BC1548 PF00633 Helix-hairpin-helix motif BC1548 PF10576 Iron-sulfur binding domain of endonuclease III BC1550 PF00905 Penicillin binding protein transpeptidase domain BC1550 PF00912 Transglycosylase BC1553 PF00912 Transglycosylase BC1553 PF00905 Penicillin binding protein transpeptidase domain BC1554 PF03838 Recombination protein U BC1555 PF10720 Protein of unknown function (DUF2515) BC1561 PF06908 YspA SLOG family BC1562 PF05103 DivIVA protein BC1563 PF02926 THUMP domain BC1563 PF01170 Putative RNA methylase family UPF0020 BC1565 PF13307 Helicase C-terminal domain BC1566 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BC1568 PF00557 Metallopeptidase family M24 BC1569 PF00156 Phosphoribosyl transferase domain BC1570 PF00860 Permease family BC1571 PF04235 Protein of unknown function (DUF418) BC1572 PF00350 Dynamin family BC1574 PF00583 Acetyltransferase (GNAT) family BC1575 PF10752 Protein of unknown function (DUF2533) BC1576 PF00581 Rhodanese-like domain BC1581 PF00690 Cation transporter/ATPase, N-terminus BC1581 PF00689 Cation transporting ATPase, C-terminus BC1582 PF01367 5'-3' exonuclease, C-terminal SAM fold BC1582 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BC1584 PF02706 Chain length determinant protein BC1584 PF13807 G-rich domain on putative tyrosine kinase BC1586 PF02397 Bacterial sugar transferase BC1589 PF00535 Glycosyl transferase family 2 BC1590 PF00534 Glycosyl transferases group 1 BC1590 PF13439 Glycosyltransferase Family 4 BC1593 PF13673 Acetyltransferase (GNAT) domain BC1593 PF18014 Acetyltransferase (GNAT) domain BC1597 PF13456 Reverse transcriptase-like BC1598 PF01263 Aldose 1-epimerase BC1603 PF00313 'Cold-shock' DNA-binding domain BC1604 PF08892 YqcI/YcgG family BC1605 PF01810 LysE type translocator BC1609 PF00474 Sodium:solute symporter family BC1610 PF00202 Aminotransferase class-III BC1612 PF00999 Sodium/hydrogen exchanger family BC1613 PF00753 Metallo-beta-lactamase superfamily BC1613 PF17770 Ribonuclease J C-terminal domain BC1613 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BC1614 PF06445 GyrI-like small molecule binding domain BC1614 PF13411 MerR HTH family regulatory protein BC1616 PF04239 Protein of unknown function (DUF421) BC1617 PF02698 DUF218 domain BC1619 PF00881 Nitroreductase family BC1623 PF17209 Hfq protein BC1625 PF01618 MotA/TolQ/ExbB proton channel family BC1626 PF00691 OmpA family BC1626 PF13677 Membrane MotB of proton-channel complex MotA/MotB BC1627 PF00072 Response regulator receiver domain BC1628 PF01584 CheW-like domain BC1628 PF02895 Signal transducing histidine kinase, homodimeric domain BC1628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1628 PF01627 Hpt domain BC1628 PF07194 P2 response regulator binding domain BC1629 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BC1629 PF04509 CheC-like family BC1632 PF03705 CheR methyltransferase, all-alpha domain BC1632 PF01739 CheR methyltransferase, SAM binding domain BC1636 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BC1636 PF00460 Flagella basal body rod protein BC1637 PF00700 Bacterial flagellin C-terminal helical region BC1637 PF00669 Bacterial flagellin N-terminal helical region BC1638 PF02465 Flagellar hook-associated protein 2 N-terminus BC1638 PF07195 Flagellar hook-associated protein 2 C-terminus BC1641 PF00460 Flagella basal body rod protein BC1642 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BC1642 PF00460 Flagella basal body rod protein BC1643 PF02049 Flagellar hook-basal body complex protein FliE BC1644 PF01514 Secretory protein of YscJ/FliF family BC1644 PF08345 Flagellar M-ring protein C-terminal BC1645 PF01706 FliG C-terminal domain BC1645 PF14841 FliG middle domain BC1645 PF14842 FliG N-terminal domain BC1647 PF18269 T3SS EscN ATPase C-terminal domain BC1647 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BC1647 PF02874 ATP synthase alpha/beta family, beta-barrel domain BC1651 PF00460 Flagella basal body rod protein BC1651 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BC1651 PF07559 Flagellar basal body protein FlaE BC1654 PF01584 CheW-like domain BC1654 PF00072 Response regulator receiver domain BC1655 PF12181 DNA binding domain of the motility gene repressor (MogR) BC1656 PF00669 Bacterial flagellin N-terminal helical region BC1656 PF00700 Bacterial flagellin C-terminal helical region BC1657 PF00700 Bacterial flagellin C-terminal helical region BC1657 PF00669 Bacterial flagellin N-terminal helical region BC1658 PF00700 Bacterial flagellin C-terminal helical region BC1658 PF00669 Bacterial flagellin N-terminal helical region BC1659 PF00700 Bacterial flagellin C-terminal helical region BC1659 PF00669 Bacterial flagellin N-terminal helical region BC1660 PF01464 Transglycosylase SLT domain BC1662 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BC1662 PF02154 Flagellar motor switch protein FliM BC1663 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BC1663 PF04509 CheC-like family BC1665 PF00813 FliP family BC1666 PF01313 Bacterial export proteins, family 3 BC1668 PF01312 FlhB HrpN YscU SpaS Family BC1671 PF00460 Flagella basal body rod protein BC1671 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BC1672 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BC1672 PF01411 tRNA synthetases class II (A) BC1672 PF02272 DHHA1 domain BC1678 PF03992 Antibiotic biosynthesis monooxygenase BC1679 PF08141 Small acid-soluble spore protein H family BC1683 PF03466 LysR substrate binding domain BC1683 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC1684 PF00005 ABC transporter BC1684 PF08402 TOBE domain BC1686 PF00528 Binding-protein-dependent transport system inner membrane component BC1688 PF10787 Uncharacterised protein from bacillus cereus group BC1691 PF00300 Histidine phosphatase superfamily (branch 1) BC1693 PF00561 alpha/beta hydrolase fold BC1695 PF01047 MarR family BC1697 PF13537 Glutamine amidotransferase domain BC1697 PF00733 Asparagine synthase BC1701 PF01545 Cation efflux family BC1701 PF16916 Dimerisation domain of Zinc Transporter BC1703 PF00392 Bacterial regulatory proteins, gntR family BC1703 PF07729 FCD domain BC1704 PF00892 EamA-like transporter family BC1705 PF02492 CobW/HypB/UreG, nucleotide-binding domain BC1705 PF07683 Cobalamin synthesis protein cobW C-terminal domain BC1706 PF03773 Predicted permease BC1709 PF03553 Na+/H+ antiporter family BC1710 PF13411 MerR HTH family regulatory protein BC1712 PF00206 Lyase BC1712 PF10415 Fumarase C C-terminus BC1716 PF01554 MatE BC1717 PF03575 Peptidase family S51 BC1721 PF02683 Cytochrome C biogenesis protein transmembrane region BC1722 PF00578 AhpC/TSA family BC1725 PF00291 Pyridoxal-phosphate dependent enzyme BC1726 PF04286 Protein of unknown function (DUF445) BC1732 PF00196 Bacterial regulatory proteins, luxR family BC1732 PF00072 Response regulator receiver domain BC1733 PF07730 Histidine kinase BC1733 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1733 PF13185 GAF domain BC1733 PF13492 GAF domain BC1734 PF00005 ABC transporter BC1737 PF13091 PLD-like domain BC1738 PF00696 Amino acid kinase family BC1739 PF00375 Sodium:dicarboxylate symporter family BC1740 PF10415 Fumarase C C-terminus BC1740 PF00206 Lyase BC1741 PF03949 Malic enzyme, NAD binding domain BC1741 PF00390 Malic enzyme, N-terminal domain BC1742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1743 PF08664 YcbB domain BC1743 PF00072 Response regulator receiver domain BC1744 PF04434 SWIM zinc finger BC1744 PF00271 Helicase conserved C-terminal domain BC1744 PF00176 SNF2 family N-terminal domain BC1746 PF03590 Aspartate-ammonia ligase BC1748 PF13840 ACT domain BC1748 PF00696 Amino acid kinase family BC1750 PF13761 Domain of unknown function (DUF4166) BC1751 PF14158 YndJ-like protein BC1752 PF00293 NUDIX domain BC1752 PF09297 NADH pyrophosphatase zinc ribbon domain BC1753 PF07690 Major Facilitator Superfamily BC1755 PF03976 Polyphosphate kinase 2 (PPK2) BC1756 PF03551 Transcriptional regulator PadR-like family BC1756 PF10400 Virulence activator alpha C-term BC1757 PF07690 Major Facilitator Superfamily BC1759 PF07690 Major Facilitator Superfamily BC1760 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BC1760 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BC1761 PF01926 50S ribosome-binding GTPase BC1761 PF13167 GTP-binding GTPase N-terminal BC1761 PF16360 GTP-binding GTPase Middle Region BC1762 PF07690 Major Facilitator Superfamily BC1763 PF00291 Pyridoxal-phosphate dependent enzyme BC1767 PF00209 Sodium:neurotransmitter symporter family BC1768 PF01522 Polysaccharide deacetylase BC1768 PF03422 Carbohydrate binding module (family 6) BC1768 PF00457 Glycosyl hydrolases family 11 BC1770 PF04239 Protein of unknown function (DUF421) BC1774 PF01625 Peptide methionine sulfoxide reductase BC1776 PF01063 Amino-transferase class IV BC1777 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BC1777 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BC1777 PF00205 Thiamine pyrophosphate enzyme, central domain BC1779 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BC1779 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BC1780 PF00920 Dehydratase family BC1781 PF00291 Pyridoxal-phosphate dependent enzyme BC1781 PF00585 C-terminal regulatory domain of Threonine dehydratase BC1783 PF09587 Bacterial capsule synthesis protein PGA_cap BC1786 PF07690 Major Facilitator Superfamily BC1787 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BC1789 PF04397 LytTr DNA-binding domain BC1789 PF00072 Response regulator receiver domain BC1790 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BC1790 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BC1793 PF01979 Amidohydrolase family BC1794 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC1799 PF13302 Acetyltransferase (GNAT) domain BC1800 PF00486 Transcriptional regulatory protein, C terminal BC1800 PF00072 Response regulator receiver domain BC1801 PF00512 His Kinase A (phospho-acceptor) domain BC1801 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1803 PF01566 Natural resistance-associated macrophage protein BC1804 PF00581 Rhodanese-like domain BC1804 PF12368 Rhodanase C-terminal BC1804 PF17773 UPF0176 acylphosphatase like domain BC1806 PF02558 Ketopantoate reductase PanE/ApbA BC1806 PF08546 Ketopantoate reductase PanE/ApbA C terminal BC1807 PF13520 Amino acid permease BC1810 PF05791 Bacillus haemolytic enterotoxin (HBL) BC1811 PF05791 Bacillus haemolytic enterotoxin (HBL) BC1812 PF02073 Thermophilic metalloprotease (M29) BC1815 PF00583 Acetyltransferase (GNAT) family BC1816 PF01906 Putative heavy-metal-binding BC1818 PF00440 Bacterial regulatory proteins, tetR family BC1819 PF04198 Putative sugar-binding domain BC1820 PF01791 DeoC/LacD family aldolase BC1821 PF01773 Na+ dependent nucleoside transporter N-terminus BC1821 PF07662 Na+ dependent nucleoside transporter C-terminus BC1822 PF02885 Glycosyl transferase family, helical bundle domain BC1822 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BC1822 PF00591 Glycosyl transferase family, a/b domain BC1823 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BC1825 PF13276 HTH-like domain BC1825 PF13333 Integrase core domain BC1825 PF00665 Integrase core domain BC1826 PF07301 Protein of unknown function (DUF1453) BC1827 PF05979 Bacterial protein of unknown function (DUF896) BC1828 PF05195 Aminopeptidase P, N-terminal domain BC1828 PF00557 Metallopeptidase family M24 BC1830 PF07732 Multicopper oxidase BC1830 PF00394 Multicopper oxidase BC1830 PF07731 Multicopper oxidase BC1832 PF13342 C-terminal repeat of topoisomerase BC1832 PF01131 DNA topoisomerase BC1832 PF01396 Topoisomerase DNA binding C4 zinc finger BC1832 PF01751 Toprim domain BC1835 PF02525 Flavodoxin-like fold BC1836 PF05525 Branched-chain amino acid transport protein BC1837 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC1838 PF04234 CopC domain BC1838 PF05425 Copper resistance protein D BC1838 PF13115 YtkA-like BC1839 PF07987 Domain of unkown function (DUF1775) BC1840 PF00892 EamA-like transporter family BC1841 PF03466 LysR substrate binding domain BC1841 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC1842 PF02082 Transcriptional regulator BC1843 PF01323 DSBA-like thioredoxin domain BC1844 PF00881 Nitroreductase family BC1846 PF01425 Amidase BC1847 PF01381 Helix-turn-helix BC1864 PF00476 DNA polymerase family A BC1864 PF01367 5'-3' exonuclease, C-terminal SAM fold BC1864 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BC1884 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BC1884 PF18277 AbrB C-terminal domain BC1911 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BC1911 PF13457 GW (Gly-Tryp) dipeptide domain BC1922 PF01425 Amidase BC1923 PF01594 AI-2E family transporter BC1924 PF00056 lactate/malate dehydrogenase, NAD binding domain BC1924 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BC1925 PF01593 Flavin containing amine oxidoreductase BC1926 PF02492 CobW/HypB/UreG, nucleotide-binding domain BC1926 PF07683 Cobalamin synthesis protein cobW C-terminal domain BC1928 PF12399 Branched-chain amino acid ATP-binding cassette transporter BC1928 PF00005 ABC transporter BC1929 PF00005 ABC transporter BC1930 PF02653 Branched-chain amino acid transport system / permease component BC1932 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC1932 PF03466 LysR substrate binding domain BC1936 PF01047 MarR family BC1938 PF01654 Cytochrome bd terminal oxidase subunit I BC1939 PF02322 Cytochrome bd terminal oxidase subunit II BC1940 PF00664 ABC transporter transmembrane region BC1940 PF00005 ABC transporter BC1941 PF00005 ABC transporter BC1941 PF00664 ABC transporter transmembrane region BC1943 PF00535 Glycosyl transferase family 2 BC1944 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BC1945 PF00132 Bacterial transferase hexapeptide (six repeats) BC1950 PF02016 LD-carboxypeptidase N-terminal domain BC1950 PF17676 LD-carboxypeptidase C-terminal domain BC1951 PF00768 D-alanyl-D-alanine carboxypeptidase BC1951 PF07943 Penicillin-binding protein 5, C-terminal domain BC1953 PF01476 LysM domain BC1953 PF00877 NlpC/P60 family BC1955 PF00664 ABC transporter transmembrane region BC1955 PF00005 ABC transporter BC1956 PF00486 Transcriptional regulatory protein, C terminal BC1956 PF00072 Response regulator receiver domain BC1957 PF16736 Single Cache-like BC1957 PF00989 PAS fold BC1957 PF00512 His Kinase A (phospho-acceptor) domain BC1957 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1958 PF00106 short chain dehydrogenase BC1959 PF04439 Streptomycin adenylyltransferase BC1960 PF01522 Polysaccharide deacetylase BC1964 PF03447 Homoserine dehydrogenase, NAD binding domain BC1964 PF01842 ACT domain BC1964 PF00742 Homoserine dehydrogenase BC1965 PF00291 Pyridoxal-phosphate dependent enzyme BC1966 PF08544 GHMP kinases C terminal BC1966 PF00288 GHMP kinases N terminal domain BC1969 PF03816 Cell envelope-related transcriptional attenuator domain BC1972 PF00072 Response regulator receiver domain BC1972 PF00486 Transcriptional regulatory protein, C terminal BC1973 PF00512 His Kinase A (phospho-acceptor) domain BC1973 PF00989 PAS fold BC1973 PF16736 Single Cache-like BC1973 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC1974 PF01522 Polysaccharide deacetylase BC1976 PF02308 MgtC family BC1977 PF00583 Acetyltransferase (GNAT) family BC1978 PF04183 IucA / IucC family BC1978 PF06276 Ferric iron reductase FhuF-like transporter BC1979 PF04183 IucA / IucC family BC1979 PF06276 Ferric iron reductase FhuF-like transporter BC1980 PF00501 AMP-binding enzyme BC1980 PF13193 AMP-binding enzyme C-terminal domain BC1983 PF01261 Xylose isomerase-like TIM barrel BC1984 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC1986 PF01810 LysE type translocator BC1987 PF00392 Bacterial regulatory proteins, gntR family BC1987 PF00155 Aminotransferase class I and II BC1989 PF01734 Patatin-like phospholipase BC1993 PF13344 Haloacid dehalogenase-like hydrolase BC1993 PF00293 NUDIX domain BC1994 PF02540 NAD synthase BC1995 PF02687 FtsX-like permease family BC1996 PF18277 AbrB C-terminal domain BC1996 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BC1997 PF00082 Subtilase family BC1998 PF01022 Bacterial regulatory protein, arsR family BC1999 PF00248 Aldo/keto reductase family BC2001 PF05656 Protein of unknown function (DUF805) BC2005 PF03193 RsgA GTPase BC2006 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC2006 PF00672 HAMP domain BC2006 PF02743 Cache domain BC2011 PF00210 Ferritin-like domain BC2014 PF00296 Luciferase-like monooxygenase BC2016 PF01593 Flavin containing amine oxidoreductase BC2017 PF13302 Acetyltransferase (GNAT) domain BC2018 PF00248 Aldo/keto reductase family BC2019 PF07683 Cobalamin synthesis protein cobW C-terminal domain BC2019 PF02492 CobW/HypB/UreG, nucleotide-binding domain BC2020 PF00583 Acetyltransferase (GNAT) family BC2021 PF01297 Zinc-uptake complex component A periplasmic BC2022 PF13460 NAD(P)H-binding BC2023 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BC2024 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BC2024 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BC2026 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC2027 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC2029 PF00300 Histidine phosphatase superfamily (branch 1) BC2031 PF08757 CotH kinase protein BC2032 PF00293 NUDIX domain BC2033 PF09335 SNARE associated Golgi protein BC2034 PF14667 Polysaccharide biosynthesis C-terminal domain BC2034 PF01943 Polysaccharide biosynthesis protein BC2036 PF03773 Predicted permease BC2037 PF09323 Domain of unknown function (DUF1980) BC2038 PF03061 Thioesterase superfamily BC2039 PF13091 PLD-like domain BC2039 PF13396 Phospholipase_D-nuclease N-terminal BC2042 PF13460 NAD(P)H-binding BC2043 PF04306 Protein of unknown function (DUF456) BC2044 PF00571 CBS domain BC2044 PF03471 Transporter associated domain BC2044 PF01595 Cyclin M transmembrane N-terminal domain BC2047 PF05525 Branched-chain amino acid transport protein BC2048 PF01588 Putative tRNA binding domain BC2050 PF07454 Stage II sporulation protein P (SpoIIP) BC2052 PF02557 D-alanyl-D-alanine carboxypeptidase BC2054 PF01425 Amidase BC2055 PF07690 Major Facilitator Superfamily BC2057 PF01145 SPFH domain / Band 7 family BC2058 PF07454 Stage II sporulation protein P (SpoIIP) BC2063 PF01168 Alanine racemase, N-terminal domain BC2063 PF00842 Alanine racemase, C-terminal domain BC2066 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BC2067 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC2067 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC2068 PF00155 Aminotransferase class I and II BC2068 PF00392 Bacterial regulatory proteins, gntR family BC2074 PF00583 Acetyltransferase (GNAT) family BC2077 PF06013 Proteins of 100 residues with WXG BC2080 PF10140 WXG100 protein secretion system (Wss), protein YukC BC2081 PF01580 FtsK/SpoIIIE family BC2081 PF12538 DNA transporter BC2095 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BC2100 PF01209 ubiE/COQ5 methyltransferase family BC2101 PF01268 Formate--tetrahydrofolate ligase BC2103 PF00270 DEAD/DEAH box helicase BC2103 PF00271 Helicase conserved C-terminal domain BC2104 PF01261 Xylose isomerase-like TIM barrel BC2105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC2107 PF08240 Alcohol dehydrogenase GroES-like domain BC2107 PF00107 Zinc-binding dehydrogenase BC2108 PF08281 Sigma-70, region 4 BC2108 PF04542 Sigma-70 region 2 BC2110 PF03109 ABC1 family BC2114 PF00255 Glutathione peroxidase BC2115 PF13559 Domain of unknown function (DUF4129) BC2115 PF01841 Transglutaminase-like superfamily BC2115 PF11992 Domain of unknown function (DUF3488) BC2117 PF17863 AAA lid domain BC2117 PF07726 ATPase family associated with various cellular activities (AAA) BC2118 PF14710 Respiratory nitrate reductase alpha N-terminal BC2118 PF00384 Molybdopterin oxidoreductase BC2118 PF01568 Molydopterin dinucleotide binding domain BC2119 PF14711 Respiratory nitrate reductase beta C-terminal BC2119 PF13247 4Fe-4S dicluster domain BC2120 PF02613 Nitrate reductase delta subunit BC2121 PF02665 Nitrate reductase gamma subunit BC2122 PF00027 Cyclic nucleotide-binding domain BC2122 PF00325 Bacterial regulatory proteins, crp family BC2123 PF04055 Radical SAM superfamily BC2123 PF06463 Molybdenum Cofactor Synthesis C BC2124 PF00899 ThiF family BC2125 PF00994 Probable molybdopterin binding domain BC2125 PF03453 MoeA N-terminal region (domain I and II) BC2125 PF03454 MoeA C-terminal region (domain IV) BC2126 PF02391 MoaE protein BC2128 PF07690 Major Facilitator Superfamily BC2133 PF01903 CbiX BC2134 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BC2135 PF00355 Rieske [2Fe-2S] domain BC2136 PF18267 Rubredoxin NAD+ reductase C-terminal domain BC2136 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC2136 PF04324 BFD-like [2Fe-2S] binding domain BC2136 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BC2136 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BC2137 PF04405 Domain of Unknown function (DUF542) BC2137 PF01814 Hemerythrin HHE cation binding domain BC2142 PF04232 Stage V sporulation protein S (SpoVS) BC2147 PF18801 response regulator aspartate phosphatase H, N terminal BC2147 PF17874 MalT-like TPR region BC2150 PF01966 HD domain BC2151 PF12848 ABC transporter BC2151 PF16326 ABC transporter C-terminal domain BC2151 PF00005 ABC transporter BC2154 PF00436 Single-strand binding protein family BC2155 PF13769 Virulence factor BC2155 PF08712 Scaffold protein Nfu/NifU N terminal BC2157 PF06491 Disulphide isomerase BC2158 PF04445 Putative SAM-dependent methyltransferase BC2164 PF00133 tRNA synthetases class I (I, L, M and V) BC2164 PF08264 Anticodon-binding domain of tRNA BC2169 PF01336 OB-fold nucleic acid binding domain BC2169 PF00152 tRNA synthetases class II (D, K and N) BC2170 PF00209 Sodium:neurotransmitter symporter family BC2173 PF10997 Alternate to MurJ BC2174 PF13419 Haloacid dehalogenase-like hydrolase BC2176 PF00465 Iron-containing alcohol dehydrogenase BC2177 PF01177 Asp/Glu/Hydantoin racemase BC2178 PF01980 tRNA-methyltransferase O BC2179 PF00583 Acetyltransferase (GNAT) family BC2180 PF11188 Protein of unknown function (DUF2975) BC2181 PF13443 Cro/C1-type HTH DNA-binding domain BC2182 PF08645 Polynucleotide kinase 3 phosphatase BC2184 PF00005 ABC transporter BC2185 PF05975 Bacterial ABC transporter protein EcsB BC2186 PF14005 YpjP-like protein BC2187 PF13419 Haloacid dehalogenase-like hydrolase BC2190 PF00144 Beta-lactamase BC2190 PF07930 D-aminopeptidase, domain B BC2191 PF00303 Thymidylate synthase BC2192 PF00186 Dihydrofolate reductase BC2193 PF05223 NTF2-like N-terminal transpeptidase domain BC2193 PF00905 Penicillin binding protein transpeptidase domain BC2193 PF03717 Penicillin-binding Protein dimerisation domain BC2194 PF02525 Flavodoxin-like fold BC2195 PF01553 Acyltransferase BC2196 PF03006 Haemolysin-III related BC2197 PF02416 mttA/Hcf106 family BC2198 PF00902 Sec-independent protein translocase protein (TatC) BC2200 PF02645 Uncharacterised protein, DegV family COG1307 BC2202 PF02630 SCO1/SenC BC2203 PF00011 Hsp20/alpha crystallin family BC2204 PF00733 Asparagine synthase BC2204 PF13537 Glutamine amidotransferase domain BC2207 PF01520 N-acetylmuramoyl-L-alanine amidase BC2207 PF05036 Sporulation related domain BC2208 PF01497 Periplasmic binding protein BC2209 PF01063 Amino-transferase class IV BC2210 PF00881 Nitroreductase family BC2213 PF00857 Isochorismatase family BC2214 PF00011 Hsp20/alpha crystallin family BC2215 PF00924 Mechanosensitive ion channel BC2216 PF13185 GAF domain BC2216 PF07730 Histidine kinase BC2217 PF00196 Bacterial regulatory proteins, luxR family BC2217 PF00072 Response regulator receiver domain BC2218 PF01418 Helix-turn-helix domain, rpiR family BC2218 PF01380 SIS domain BC2219 PF02567 Phenazine biosynthesis-like protein BC2220 PF00107 Zinc-binding dehydrogenase BC2220 PF08240 Alcohol dehydrogenase GroES-like domain BC2223 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BC2223 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BC2224 PF02447 GntP family permease BC2225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BC2225 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BC2226 PF10924 Protein of unknown function (DUF2711) BC2229 PF03358 NADPH-dependent FMN reductase BC2232 PF00571 CBS domain BC2232 PF00005 ABC transporter BC2233 PF00528 Binding-protein-dependent transport system inner membrane component BC2234 PF13520 Amino acid permease BC2240 PF03471 Transporter associated domain BC2240 PF01595 Cyclin M transmembrane N-terminal domain BC2240 PF00571 CBS domain BC2241 PF00171 Aldehyde dehydrogenase family BC2242 PF07997 Protein of unknown function (DUF1694) BC2243 PF09385 Histidine kinase N terminal BC2245 PF00202 Aminotransferase class-III BC2246 PF01144 Coenzyme A transferase BC2247 PF01144 Coenzyme A transferase BC2248 PF07687 Peptidase dimerisation domain BC2248 PF01546 Peptidase family M20/M25/M40 BC2249 PF00583 Acetyltransferase (GNAT) family BC2250 PF02954 Bacterial regulatory protein, Fis family BC2250 PF00158 Sigma-54 interaction domain BC2250 PF13426 PAS domain BC2251 PF12544 Lysine-2,3-aminomutase BC2252 PF14122 YokU-like protein, putative antitoxin BC2253 PF06855 YozE SAM-like fold BC2256 PF14162 YozD-like protein BC2258 PF08239 Bacterial SH3 domain BC2258 PF00069 Protein kinase domain BC2260 PF01569 PAP2 superfamily BC2261 PF01545 Cation efflux family BC2261 PF16916 Dimerisation domain of Zinc Transporter BC2262 PF00085 Thioredoxin BC2263 PF13302 Acetyltransferase (GNAT) domain BC2276 PF10676 Spore germination protein gerPA/gerPF BC2278 PF00106 short chain dehydrogenase BC2281 PF00905 Penicillin binding protein transpeptidase domain BC2281 PF00912 Transglycosylase BC2283 PF07690 Major Facilitator Superfamily BC2284 PF01521 Iron-sulphur cluster biosynthesis BC2285 PF00285 Citrate synthase, C-terminal domain BC2286 PF03972 MmgE/PrpD family BC2288 PF02770 Acyl-CoA dehydrogenase, middle domain BC2288 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BC2288 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BC2289 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BC2289 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BC2290 PF00171 Aldehyde dehydrogenase family BC2291 PF01810 LysE type translocator BC2292 PF00378 Enoyl-CoA hydratase/isomerase BC2295 PF00149 Calcineurin-like phosphoesterase BC2295 PF12320 Type 5 capsule protein repressor C-terminal domain BC2296 PF13476 AAA domain BC2298 PF01022 Bacterial regulatory protein, arsR family BC2300 PF07690 Major Facilitator Superfamily BC2302 PF00106 short chain dehydrogenase BC2303 PF00425 chorismate binding enzyme BC2304 PF13193 AMP-binding enzyme C-terminal domain BC2304 PF00501 AMP-binding enzyme BC2305 PF00857 Isochorismatase family BC2305 PF00550 Phosphopantetheine attachment site BC2308 PF13193 AMP-binding enzyme C-terminal domain BC2308 PF00975 Thioesterase domain BC2308 PF00550 Phosphopantetheine attachment site BC2308 PF00501 AMP-binding enzyme BC2308 PF00668 Condensation domain BC2309 PF03621 MbtH-like protein BC2310 PF07690 Major Facilitator Superfamily BC2313 PF00216 Bacterial DNA-binding protein BC2315 PF05163 DinB family BC2316 PF00082 Subtilase family BC2317 PF01235 Sodium:alanine symporter family BC2321 PF00849 RNA pseudouridylate synthase BC2321 PF01479 S4 domain BC2322 PF03129 Anticodon binding domain BC2322 PF02824 TGS domain BC2322 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BC2322 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BC2323 PF00005 ABC transporter BC2325 PF07690 Major Facilitator Superfamily BC2328 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BC2328 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BC2328 PF00205 Thiamine pyrophosphate enzyme, central domain BC2330 PF00753 Metallo-beta-lactamase superfamily BC2335 PF00027 Cyclic nucleotide-binding domain BC2337 PF00561 alpha/beta hydrolase fold BC2339 PF16123 Hydroxyacylglutathione hydrolase C-terminus BC2339 PF00753 Metallo-beta-lactamase superfamily BC2342 PF13333 Integrase core domain BC2342 PF13276 HTH-like domain BC2342 PF00665 Integrase core domain BC2349 PF00583 Acetyltransferase (GNAT) family BC2354 PF01593 Flavin containing amine oxidoreductase BC2356 PF13302 Acetyltransferase (GNAT) domain BC2358 PF00313 'Cold-shock' DNA-binding domain BC2362 PF03466 LysR substrate binding domain BC2362 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC2363 PF02774 Semialdehyde dehydrogenase, dimerisation domain BC2363 PF01118 Semialdehyde dehydrogenase, NAD binding domain BC2367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC2367 PF03466 LysR substrate binding domain BC2368 PF03475 3-alpha domain BC2368 PF03473 MOSC domain BC2371 PF00664 ABC transporter transmembrane region BC2371 PF00005 ABC transporter BC2372 PF00005 ABC transporter BC2372 PF00664 ABC transporter transmembrane region BC2378 PF01810 LysE type translocator BC2379 PF07883 Cupin domain BC2379 PF01381 Helix-turn-helix BC2385 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC2385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BC2386 PF08281 Sigma-70, region 4 BC2386 PF12680 SnoaL-like domain BC2386 PF04542 Sigma-70 region 2 BC2392 PF02638 Glycosyl hydrolase-like 10 BC2394 PF02378 Phosphotransferase system, EIIC BC2396 PF03702 Anhydro-N-acetylmuramic acid kinase BC2397 PF01869 BadF/BadG/BcrA/BcrD ATPase family BC2398 PF02660 Glycerol-3-phosphate acyltransferase BC2399 PF00266 Aminotransferase class-V BC2400 PF00291 Pyridoxal-phosphate dependent enzyme BC2401 PF01047 MarR family BC2402 PF07690 Major Facilitator Superfamily BC2406 PF16123 Hydroxyacylglutathione hydrolase C-terminus BC2406 PF00753 Metallo-beta-lactamase superfamily BC2408 PF00270 DEAD/DEAH box helicase BC2408 PF00271 Helicase conserved C-terminal domain BC2410 PF00440 Bacterial regulatory proteins, tetR family BC2410 PF17932 Tetracyclin repressor-like, C-terminal domain BC2421 PF00589 Phage integrase family BC2430 PF03848 Tellurite resistance protein TehB BC2430 PF09313 Domain of unknown function (DUF1971) BC2432 PF08241 Methyltransferase domain BC2433 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BC2433 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BC2433 PF00205 Thiamine pyrophosphate enzyme, central domain BC2434 PF01047 MarR family BC2435 PF00300 Histidine phosphatase superfamily (branch 1) BC2436 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BC2439 PF07687 Peptidase dimerisation domain BC2439 PF01546 Peptidase family M20/M25/M40 BC2442 PF00072 Response regulator receiver domain BC2442 PF00196 Bacterial regulatory proteins, luxR family BC2444 PF18277 AbrB C-terminal domain BC2444 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BC2446 PF01925 Sulfite exporter TauE/SafE BC2447 PF00132 Bacterial transferase hexapeptide (six repeats) BC2448 PF00768 D-alanyl-D-alanine carboxypeptidase BC2448 PF07943 Penicillin-binding protein 5, C-terminal domain BC2450 PF07690 Major Facilitator Superfamily BC2451 PF00550 Phosphopantetheine attachment site BC2451 PF00668 Condensation domain BC2451 PF00501 AMP-binding enzyme BC2451 PF13193 AMP-binding enzyme C-terminal domain BC2452 PF13193 AMP-binding enzyme C-terminal domain BC2452 PF00501 AMP-binding enzyme BC2452 PF00550 Phosphopantetheine attachment site BC2452 PF00668 Condensation domain BC2453 PF00501 AMP-binding enzyme BC2453 PF07993 Male sterility protein BC2453 PF00668 Condensation domain BC2453 PF13193 AMP-binding enzyme C-terminal domain BC2453 PF00550 Phosphopantetheine attachment site BC2454 PF00501 AMP-binding enzyme BC2454 PF00550 Phosphopantetheine attachment site BC2454 PF00668 Condensation domain BC2454 PF13193 AMP-binding enzyme C-terminal domain BC2455 PF07993 Male sterility protein BC2455 PF00550 Phosphopantetheine attachment site BC2455 PF13193 AMP-binding enzyme C-terminal domain BC2455 PF00501 AMP-binding enzyme BC2455 PF00668 Condensation domain BC2456 PF00501 AMP-binding enzyme BC2456 PF00668 Condensation domain BC2456 PF13193 AMP-binding enzyme C-terminal domain BC2456 PF00550 Phosphopantetheine attachment site BC2457 PF01648 4'-phosphopantetheinyl transferase superfamily BC2458 PF00975 Thioesterase domain BC2460 PF05139 Erythromycin esterase BC2462 PF13302 Acetyltransferase (GNAT) domain BC2464 PF00395 S-layer homology domain BC2464 PF01520 N-acetylmuramoyl-L-alanine amidase BC2466 PF18496 Collagenase G catalytic helper subdomain BC2466 PF01752 Collagenase BC2466 PF08453 Peptidase family M9 N-terminal BC2467 PF11954 Domain of unknown function (DUF3471) BC2467 PF00144 Beta-lactamase BC2468 PF03717 Penicillin-binding Protein dimerisation domain BC2468 PF05223 NTF2-like N-terminal transpeptidase domain BC2468 PF00905 Penicillin binding protein transpeptidase domain BC2469 PF04542 Sigma-70 region 2 BC2469 PF08281 Sigma-70, region 4 BC2471 PF00905 Penicillin binding protein transpeptidase domain BC2471 PF03717 Penicillin-binding Protein dimerisation domain BC2474 PF13302 Acetyltransferase (GNAT) domain BC2476 PF00149 Calcineurin-like phosphoesterase BC2478 PF00005 ABC transporter BC2480 PF00440 Bacterial regulatory proteins, tetR family BC2480 PF08359 YsiA-like protein, C-terminal region BC2484 PF00289 Biotin carboxylase, N-terminal domain BC2484 PF02785 Biotin carboxylase C-terminal domain BC2484 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BC2485 PF00364 Biotin-requiring enzyme BC2486 PF00682 HMGL-like BC2487 PF00378 Enoyl-CoA hydratase/isomerase BC2488 PF01039 Carboxyl transferase domain BC2489 PF16177 Acetyl-coenzyme A synthetase N-terminus BC2489 PF00501 AMP-binding enzyme BC2489 PF13193 AMP-binding enzyme C-terminal domain BC2491 PF13333 Integrase core domain BC2491 PF00665 Integrase core domain BC2491 PF13276 HTH-like domain BC2496 PF07943 Penicillin-binding protein 5, C-terminal domain BC2496 PF00768 D-alanyl-D-alanine carboxypeptidase BC2497 PF00512 His Kinase A (phospho-acceptor) domain BC2497 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC2498 PF00072 Response regulator receiver domain BC2498 PF00486 Transcriptional regulatory protein, C terminal BC2499 PF01966 HD domain BC2502 PF13021 Domain of unknown function (DUF3885) BC2503 PF01048 Phosphorylase superfamily BC2506 PF07504 Fungalysin/Thermolysin Propeptide Motif BC2506 PF03413 Peptidase propeptide and YPEB domain BC2506 PF01447 Thermolysin metallopeptidase, catalytic domain BC2506 PF02868 Thermolysin metallopeptidase, alpha-helical domain BC2507 PF12833 Helix-turn-helix domain BC2507 PF17853 GGDEF-like domain BC2513 PF17760 UvrA interaction domain BC2513 PF00005 ABC transporter BC2513 PF17755 UvrA DNA-binding domain BC2514 PF09278 MerR, DNA binding BC2514 PF00376 MerR family regulatory protein BC2515 PF07690 Major Facilitator Superfamily BC2517 PF01638 HxlR-like helix-turn-helix BC2526 PF00155 Aminotransferase class I and II BC2526 PF00392 Bacterial regulatory proteins, gntR family BC2529 PF08240 Alcohol dehydrogenase GroES-like domain BC2529 PF00107 Zinc-binding dehydrogenase BC2531 PF04239 Protein of unknown function (DUF421) BC2534 PF08450 SMP-30/Gluconolactonase/LRE-like region BC2535 PF01921 tRNA synthetases class I (K) BC2536 PF07486 Cell Wall Hydrolase BC2538 PF00486 Transcriptional regulatory protein, C terminal BC2538 PF00072 Response regulator receiver domain BC2539 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC2541 PF12848 ABC transporter BC2541 PF00005 ABC transporter BC2543 PF00005 ABC transporter BC2544 PF02687 FtsX-like permease family BC2548 PF00742 Homoserine dehydrogenase BC2548 PF03447 Homoserine dehydrogenase, NAD binding domain BC2548 PF01842 ACT domain BC2549 PF00392 Bacterial regulatory proteins, gntR family BC2549 PF00155 Aminotransferase class I and II BC2550 PF07478 D-ala D-ala ligase C-terminus BC2550 PF01820 D-ala D-ala ligase N-terminus BC2551 PF03070 TENA/THI-4/PQQC family BC2556 PF00589 Phage integrase family BC2556 PF14659 Phage integrase, N-terminal SAM-like domain BC2575 PF00589 Phage integrase family BC2599 PF05105 Bacteriophage holin family BC2609 PF00067 Cytochrome P450 BC2611 PF00132 Bacterial transferase hexapeptide (six repeats) BC2612 PF07561 Domain of Unknown Function (DUF1540) BC2613 PF00067 Cytochrome P450 BC2616 PF00067 Cytochrome P450 BC2619 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC2619 PF00512 His Kinase A (phospho-acceptor) domain BC2619 PF00989 PAS fold BC2619 PF13188 PAS domain BC2619 PF13426 PAS domain BC2620 PF00905 Penicillin binding protein transpeptidase domain BC2620 PF03717 Penicillin-binding Protein dimerisation domain BC2621 PF10502 Signal peptidase, peptidase S26 BC2622 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BC2623 PF01177 Asp/Glu/Hydantoin racemase BC2624 PF07155 ECF-type riboflavin transporter, S component BC2625 PF02899 Phage integrase, N-terminal SAM-like domain BC2625 PF00589 Phage integrase family BC2629 PF02911 Formyl transferase, C-terminal domain BC2629 PF00551 Formyl transferase BC2632 PF06445 GyrI-like small molecule binding domain BC2632 PF12833 Helix-turn-helix domain BC2634 PF00067 Cytochrome P450 BC2638 PF05504 Spore germination B3/ GerAC like, C-terminal BC2640 PF00857 Isochorismatase family BC2643 PF13419 Haloacid dehalogenase-like hydrolase BC2645 PF13673 Acetyltransferase (GNAT) domain BC2645 PF13302 Acetyltransferase (GNAT) domain BC2645 PF03352 Methyladenine glycosylase BC2645 PF00117 Glutamine amidotransferase class-I BC2645 PF00958 GMP synthase C terminal domain BC2646 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BC2654 PF07155 ECF-type riboflavin transporter, S component BC2655 PF12558 ATP-binding cassette cobalt transporter BC2655 PF00005 ABC transporter BC2659 PF04229 GrpB protein BC2660 PF00107 Zinc-binding dehydrogenase BC2660 PF08240 Alcohol dehydrogenase GroES-like domain BC2661 PF01569 PAP2 superfamily BC2662 PF03717 Penicillin-binding Protein dimerisation domain BC2662 PF00905 Penicillin binding protein transpeptidase domain BC2662 PF03793 PASTA domain BC2671 PF01965 DJ-1/PfpI family BC2673 PF07690 Major Facilitator Superfamily BC2676 PF03009 Glycerophosphoryl diester phosphodiesterase family BC2680 PF00392 Bacterial regulatory proteins, gntR family BC2680 PF00155 Aminotransferase class I and II BC2681 PF00892 EamA-like transporter family BC2682 PF01270 Glycosyl hydrolases family 8 BC2683 PF01156 Inosine-uridine preferring nucleoside hydrolase BC2686 PF00293 NUDIX domain BC2686 PF13344 Haloacid dehalogenase-like hydrolase BC2688 PF00144 Beta-lactamase BC2689 PF07690 Major Facilitator Superfamily BC2692 PF00293 NUDIX domain BC2692 PF09297 NADH pyrophosphatase zinc ribbon domain BC2693 PF00712 DNA polymerase III beta subunit, N-terminal domain BC2693 PF02767 DNA polymerase III beta subunit, central domain BC2693 PF02768 DNA polymerase III beta subunit, C-terminal domain BC2695 PF12706 Beta-lactamase superfamily domain BC2697 PF01042 Endoribonuclease L-PSP BC2698 PF09234 Domain of unknown function (DUF1963) BC2704 PF01734 Patatin-like phospholipase BC2705 PF08000 Bacterial PH domain BC2708 PF12867 DinB superfamily BC2711 PF02673 Bacitracin resistance protein BacA BC2713 PF01541 GIY-YIG catalytic domain BC2719 PF00005 ABC transporter BC2723 PF01266 FAD dependent oxidoreductase BC2729 PF00144 Beta-lactamase BC2730 PF13419 Haloacid dehalogenase-like hydrolase BC2734 PF00128 Alpha amylase, catalytic domain BC2734 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BC2734 PF03714 Bacterial pullanase-associated domain BC2735 PF03413 Peptidase propeptide and YPEB domain BC2735 PF07504 Fungalysin/Thermolysin Propeptide Motif BC2735 PF02868 Thermolysin metallopeptidase, alpha-helical domain BC2735 PF01447 Thermolysin metallopeptidase, catalytic domain BC2739 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC2740 PF00344 SecY translocase BC2741 PF00892 EamA-like transporter family BC2742 PF00392 Bacterial regulatory proteins, gntR family BC2742 PF00155 Aminotransferase class I and II BC2743 PF00561 alpha/beta hydrolase fold BC2748 PF06081 Aromatic acid exporter family member 1 BC2751 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BC2752 PF14620 YpeB sporulation BC2752 PF03413 Peptidase propeptide and YPEB domain BC2753 PF07486 Cell Wall Hydrolase BC2753 PF01471 Putative peptidoglycan binding domain BC2757 PF03301 Tryptophan 2,3-dioxygenase BC2758 PF04199 Putative cyclase BC2759 PF00266 Aminotransferase class-V BC2760 PF00440 Bacterial regulatory proteins, tetR family BC2760 PF08359 YsiA-like protein, C-terminal region BC2761 PF00293 NUDIX domain BC2761 PF13344 Haloacid dehalogenase-like hydrolase BC2766 PF00158 Sigma-54 interaction domain BC2766 PF01590 GAF domain BC2766 PF02954 Bacterial regulatory protein, Fis family BC2769 PF13302 Acetyltransferase (GNAT) domain BC2770 PF00455 DeoR C terminal sensor domain BC2770 PF08220 DeoR-like helix-turn-helix domain BC2773 PF02082 Transcriptional regulator BC2776 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BC2776 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC2777 PF02817 e3 binding domain BC2777 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BC2777 PF00364 Biotin-requiring enzyme BC2778 PF02779 Transketolase, pyrimidine binding domain BC2778 PF02780 Transketolase, C-terminal domain BC2779 PF00676 Dehydrogenase E1 component BC2781 PF00106 short chain dehydrogenase BC2782 PF04229 GrpB protein BC2782 PF13673 Acetyltransferase (GNAT) domain BC2790 PF00528 Binding-protein-dependent transport system inner membrane component BC2791 PF00005 ABC transporter BC2791 PF00571 CBS domain BC2792 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BC2793 PF00574 Clp protease BC2796 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BC2797 PF13673 Acetyltransferase (GNAT) domain BC2798 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BC2798 PF18416 N-acetylglucosamine binding protein domain 2 BC2799 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BC2800 PF03781 Sulfatase-modifying factor enzyme 1 BC2802 PF10990 Protein of unknown function (DUF2809) BC2803 PF08241 Methyltransferase domain BC2804 PF04237 YjbR BC2815 PF00271 Helicase conserved C-terminal domain BC2815 PF00270 DEAD/DEAH box helicase BC2815 PF00570 HRDC domain BC2815 PF16124 RecQ zinc-binding BC2815 PF09382 RQC domain BC2821 PF13276 HTH-like domain BC2821 PF00665 Integrase core domain BC2821 PF13333 Integrase core domain BC2822 PF01510 N-acetylmuramoyl-L-alanine amidase BC2822 PF12123 N-acetylmuramoyl-l-alanine amidase BC2826 PF02833 DHHA2 domain BC2826 PF01368 DHH family BC2827 PF18416 N-acetylglucosamine binding protein domain 2 BC2827 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BC2830 PF02627 Carboxymuconolactone decarboxylase family BC2831 PF01235 Sodium:alanine symporter family BC2832 PF00171 Aldehyde dehydrogenase family BC2833 PF00701 Dihydrodipicolinate synthetase family BC2834 PF05544 Proline racemase BC2835 PF05544 Proline racemase BC2836 PF01266 FAD dependent oxidoreductase BC2837 PF00158 Sigma-54 interaction domain BC2837 PF13188 PAS domain BC2837 PF02954 Bacterial regulatory protein, Fis family BC2838 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC2838 PF04324 BFD-like [2Fe-2S] binding domain BC2840 PF04324 BFD-like [2Fe-2S] binding domain BC2840 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC2843 PF08876 Domain of unknown function (DUF1836) BC2846 PF04914 DltD protein BC2848 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC2849 PF00877 NlpC/P60 family BC2849 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BC2850 PF13378 Enolase C-terminal domain-like BC2850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BC2853 PF00248 Aldo/keto reductase family BC2855 PF01965 DJ-1/PfpI family BC2861 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BC2861 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BC2863 PF00672 HAMP domain BC2863 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC2863 PF00512 His Kinase A (phospho-acceptor) domain BC2864 PF00486 Transcriptional regulatory protein, C terminal BC2864 PF00072 Response regulator receiver domain BC2869 PF03808 Glycosyl transferase WecB/TagA/CpsF family BC2870 PF01432 Peptidase family M3 BC2870 PF08439 Oligopeptidase F BC2871 PF02645 Uncharacterised protein, DegV family COG1307 BC2872 PF07552 Spore Coat Protein X and V domain BC2880 PF07690 Major Facilitator Superfamily BC2882 PF04519 Polymer-forming cytoskeletal BC2883 PF13171 Protein of unknown function (DUF4004) BC2884 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC2884 PF12793 Sugar transport-related sRNA regulator N-term BC2885 PF07690 Major Facilitator Superfamily BC2888 PF04226 Transglycosylase associated protein BC2891 PF08241 Methyltransferase domain BC2896 PF00155 Aminotransferase class I and II BC2897 PF07977 FabA-like domain BC2898 PF03630 Fumble BC2902 PF00005 ABC transporter BC2907 PF01594 AI-2E family transporter BC2909 PF00296 Luciferase-like monooxygenase BC2910 PF00528 Binding-protein-dependent transport system inner membrane component BC2911 PF09084 NMT1/THI5 like BC2912 PF00005 ABC transporter BC2919 PF02522 Aminoglycoside 3-N-acetyltransferase BC2921 PF13536 Putative multidrug resistance efflux transporter BC2922 PF12867 DinB superfamily BC2926 PF08713 DNA alkylation repair enzyme BC2927 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC2929 PF01522 Polysaccharide deacetylase BC2931 PF03741 Integral membrane protein TerC family BC2932 PF00884 Sulfatase BC2933 PF00005 ABC transporter BC2933 PF12848 ABC transporter BC2936 PF16295 Tetracyclin repressor-like, C-terminal domain BC2936 PF00440 Bacterial regulatory proteins, tetR family BC2938 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BC2939 PF02153 Prephenate dehydrogenase BC2939 PF01842 ACT domain BC2940 PF00155 Aminotransferase class I and II BC2941 PF01264 Chorismate synthase BC2942 PF01817 Chorismate mutase type II BC2942 PF00793 DAHP synthetase I family BC2948 PF01636 Phosphotransferase enzyme family BC2952 PF06725 3D domain BC2952 PF01476 LysM domain BC2954 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC2959 PF06039 Malate:quinone oxidoreductase (Mqo) BC2960 PF13407 Periplasmic binding protein domain BC2961 PF02653 Branched-chain amino acid transport system / permease component BC2962 PF02653 Branched-chain amino acid transport system / permease component BC2963 PF00005 ABC transporter BC2964 PF04198 Putative sugar-binding domain BC2964 PF00325 Bacterial regulatory proteins, crp family BC2965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BC2965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BC2967 PF01791 DeoC/LacD family aldolase BC2969 PF03992 Antibiotic biosynthesis monooxygenase BC2973 PF07662 Na+ dependent nucleoside transporter C-terminus BC2973 PF01773 Na+ dependent nucleoside transporter N-terminus BC2975 PF01472 PUA domain BC2975 PF00696 Amino acid kinase family BC2977 PF14748 Pyrroline-5-carboxylate reductase dimerisation BC2977 PF03807 NADP oxidoreductase coenzyme F420-dependent BC2978 PF01546 Peptidase family M20/M25/M40 BC2979 PF09339 IclR helix-turn-helix domain BC2979 PF01614 Bacterial transcriptional regulator BC2980 PF00324 Amino acid permease BC2983 PF00487 Fatty acid desaturase BC2984 PF05547 Immune inhibitor A peptidase M6 BC2985 PF04294 VanW like protein BC2986 PF00245 Alkaline phosphatase BC2987 PF11188 Protein of unknown function (DUF2975) BC2988 PF13443 Cro/C1-type HTH DNA-binding domain BC2992 PF13302 Acetyltransferase (GNAT) domain BC2993 PF12681 Glyoxalase-like domain BC2997 PF07726 ATPase family associated with various cellular activities (AAA) BC2997 PF17863 AAA lid domain BC3000 PF07690 Major Facilitator Superfamily BC3001 PF00535 Glycosyl transferase family 2 BC3004 PF00535 Glycosyl transferase family 2 BC3005 PF00535 Glycosyl transferase family 2 BC3007 PF00202 Aminotransferase class-III BC3008 PF06628 Catalase-related immune-responsive BC3008 PF00199 Catalase BC3012 PF01979 Amidohydrolase family BC3012 PF13382 Adenine deaminase C-terminal domain BC3013 PF00144 Beta-lactamase BC3018 PF17863 AAA lid domain BC3018 PF07726 ATPase family associated with various cellular activities (AAA) BC3021 PF04740 LXG domain of WXG superfamily BC3021 PF14436 Bacterial EndoU nuclease BC3024 PF00881 Nitroreductase family BC3025 PF01047 MarR family BC3026 PF03764 Elongation factor G, domain IV BC3026 PF00009 Elongation factor Tu GTP binding domain BC3026 PF14492 Elongation Factor G, domain II BC3026 PF00679 Elongation factor G C-terminus BC3028 PF00293 NUDIX domain BC3031 PF16363 GDP-mannose 4,6 dehydratase BC3033 PF12833 Helix-turn-helix domain BC3034 PF14437 MafB19-like deaminase BC3034 PF11734 TilS substrate C-terminal domain BC3034 PF01171 PP-loop family BC3035 PF00583 Acetyltransferase (GNAT) family BC3038 PF00892 EamA-like transporter family BC3039 PF00155 Aminotransferase class I and II BC3039 PF00392 Bacterial regulatory proteins, gntR family BC3040 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BC3041 PF13031 Protein of unknown function (DUF3892) BC3042 PF00672 HAMP domain BC3042 PF00512 His Kinase A (phospho-acceptor) domain BC3043 PF00072 Response regulator receiver domain BC3043 PF00486 Transcriptional regulatory protein, C terminal BC3044 PF00561 alpha/beta hydrolase fold BC3050 PF01925 Sulfite exporter TauE/SafE BC3052 PF00324 Amino acid permease BC3054 PF08713 DNA alkylation repair enzyme BC3058 PF00293 NUDIX domain BC3059 PF04989 Cephalosporin hydroxylase BC3060 PF10502 Signal peptidase, peptidase S26 BC3061 PF03717 Penicillin-binding Protein dimerisation domain BC3061 PF00905 Penicillin binding protein transpeptidase domain BC3062 PF02146 Sir2 family BC3063 PF01470 Pyroglutamyl peptidase BC3066 PF03746 LamB/YcsF family BC3067 PF02626 Carboxyltransferase domain, subdomain A and B BC3068 PF02682 Carboxyltransferase domain, subdomain C and D BC3069 PF01614 Bacterial transcriptional regulator BC3069 PF09339 IclR helix-turn-helix domain BC3070 PF10502 Signal peptidase, peptidase S26 BC3071 PF03932 CutC family BC3077 PF07670 Nucleoside recognition BC3080 PF10903 Protein of unknown function (DUF2691) BC3081 PF02915 Rubrerythrin BC3084 PF00440 Bacterial regulatory proteins, tetR family BC3087 PF00391 PEP-utilising enzyme, mobile domain BC3087 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BC3088 PF00753 Metallo-beta-lactamase superfamily BC3089 PF10710 Protein of unknown function (DUF2512) BC3090 PF11553 Protein of unknown function (DUF3231) BC3091 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC3092 PF08240 Alcohol dehydrogenase GroES-like domain BC3092 PF13823 Alcohol dehydrogenase GroES-associated BC3092 PF00107 Zinc-binding dehydrogenase BC3093 PF00206 Lyase BC3093 PF10415 Fumarase C C-terminus BC3094 PF17763 Glutaminase/Asparaginase C-terminal domain BC3094 PF00710 Asparaginase, N-terminal BC3095 PF01381 Helix-turn-helix BC3097 PF05504 Spore germination B3/ GerAC like, C-terminal BC3098 PF03845 Spore germination protein BC3099 PF03323 Bacillus/Clostridium GerA spore germination protein BC3100 PF00989 PAS fold BC3100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC3100 PF13426 PAS domain BC3100 PF00512 His Kinase A (phospho-acceptor) domain BC3100 PF13188 PAS domain BC3101 PF05791 Bacillus haemolytic enterotoxin (HBL) BC3102 PF05791 Bacillus haemolytic enterotoxin (HBL) BC3105 PF17853 GGDEF-like domain BC3105 PF12833 Helix-turn-helix domain BC3106 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC3107 PF12826 Helix-hairpin-helix motif BC3107 PF02151 UvrB/uvrC motif BC3107 PF01541 GIY-YIG catalytic domain BC3107 PF08459 UvrC Helix-hairpin-helix N-terminal BC3108 PF13520 Amino acid permease BC3109 PF03807 NADP oxidoreductase coenzyme F420-dependent BC3109 PF14748 Pyrroline-5-carboxylate reductase dimerisation BC3110 PF05504 Spore germination B3/ GerAC like, C-terminal BC3111 PF03845 Spore germination protein BC3113 PF00072 Response regulator receiver domain BC3113 PF08664 YcbB domain BC3114 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC3115 PF04960 Glutaminase BC3116 PF01235 Sodium:alanine symporter family BC3118 PF00067 Cytochrome P450 BC3119 PF00144 Beta-lactamase BC3121 PF00149 Calcineurin-like phosphoesterase BC3121 PF17936 Bacterial Ig domain BC3121 PF02872 5'-nucleotidase, C-terminal domain BC3122 PF00561 alpha/beta hydrolase fold BC3123 PF00857 Isochorismatase family BC3127 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC3127 PF03466 LysR substrate binding domain BC3128 PF01047 MarR family BC3129 PF01544 CorA-like Mg2+ transporter protein BC3133 PF12146 Serine aminopeptidase, S33 BC3133 PF13026 Protein of unknown function (DUF3887) BC3136 PF03073 TspO/MBR family BC3137 PF03441 FAD binding domain of DNA photolyase BC3137 PF00875 DNA photolyase BC3141 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BC3142 PF00361 Proton-conducting membrane transporter BC3142 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BC3143 PF10057 Uncharacterized conserved protein (DUF2294) BC3144 PF10057 Uncharacterized conserved protein (DUF2294) BC3146 PF01522 Polysaccharide deacetylase BC3148 PF00583 Acetyltransferase (GNAT) family BC3149 PF01040 UbiA prenyltransferase family BC3150 PF12833 Helix-turn-helix domain BC3150 PF01965 DJ-1/PfpI family BC3151 PF12746 GNAT acetyltransferase BC3152 PF01451 Low molecular weight phosphotyrosine protein phosphatase BC3153 PF01758 Sodium Bile acid symporter family BC3154 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC3155 PF01022 Bacterial regulatory protein, arsR family BC3158 PF01872 RibD C-terminal domain BC3159 PF00550 Phosphopantetheine attachment site BC3159 PF07993 Male sterility protein BC3160 PF00440 Bacterial regulatory proteins, tetR family BC3160 PF18665 Tetracyclin repressor-like, C-terminal domain BC3161 PF08453 Peptidase family M9 N-terminal BC3161 PF01752 Collagenase BC3161 PF18496 Collagenase G catalytic helper subdomain BC3162 PF07690 Major Facilitator Superfamily BC3163 PF00440 Bacterial regulatory proteins, tetR family BC3163 PF16859 Tetracyclin repressor-like, C-terminal domain BC3164 PF12804 MobA-like NTP transferase domain BC3165 PF02625 XdhC and CoxI family BC3165 PF13478 XdhC Rossmann domain BC3166 PF00111 2Fe-2S iron-sulfur cluster binding domain BC3166 PF01799 [2Fe-2S] binding domain BC3168 PF01799 [2Fe-2S] binding domain BC3168 PF00111 2Fe-2S iron-sulfur cluster binding domain BC3168 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BC3168 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BC3170 PF01609 Transposase DDE domain BC3171 PF13847 Methyltransferase domain BC3171 PF00069 Protein kinase domain BC3175 PF01037 Lrp/AsnC ligand binding domain BC3178 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC3187 PF00144 Beta-lactamase BC3188 PF00144 Beta-lactamase BC3190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC3190 PF03466 LysR substrate binding domain BC3191 PF00892 EamA-like transporter family BC3194 PF12802 MarR family BC3200 PF00072 Response regulator receiver domain BC3200 PF00486 Transcriptional regulatory protein, C terminal BC3201 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC3201 PF00512 His Kinase A (phospho-acceptor) domain BC3201 PF00672 HAMP domain BC3207 PF00072 Response regulator receiver domain BC3207 PF00196 Bacterial regulatory proteins, luxR family BC3211 PF00258 Flavodoxin BC3211 PF00667 FAD binding domain BC3211 PF00067 Cytochrome P450 BC3211 PF00175 Oxidoreductase NAD-binding domain BC3212 PF07690 Major Facilitator Superfamily BC3216 PF00291 Pyridoxal-phosphate dependent enzyme BC3218 PF00144 Beta-lactamase BC3219 PF04072 Leucine carboxyl methyltransferase BC3222 PF00005 ABC transporter BC3223 PF02687 FtsX-like permease family BC3227 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC3227 PF00512 His Kinase A (phospho-acceptor) domain BC3227 PF00672 HAMP domain BC3228 PF00486 Transcriptional regulatory protein, C terminal BC3228 PF00072 Response regulator receiver domain BC3229 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC3229 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC3231 PF17676 LD-carboxypeptidase C-terminal domain BC3231 PF02016 LD-carboxypeptidase N-terminal domain BC3233 PF07690 Major Facilitator Superfamily BC3235 PF07690 Major Facilitator Superfamily BC3240 PF05922 Peptidase inhibitor I9 BC3240 PF00082 Subtilase family BC3241 PF01300 Telomere recombination BC3241 PF07503 HypF finger BC3241 PF00708 Acylphosphatase BC3241 PF17788 HypF Kae1-like domain BC3242 PF00586 AIR synthase related protein, N-terminal domain BC3242 PF02769 AIR synthase related protein, C-terminal domain BC3243 PF00857 Isochorismatase family BC3244 PF01037 Lrp/AsnC ligand binding domain BC3245 PF13520 Amino acid permease BC3248 PF01842 ACT domain BC3248 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BC3248 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BC3249 PF00266 Aminotransferase class-V BC3252 PF07883 Cupin domain BC3253 PF01497 Periplasmic binding protein BC3253 PF12833 Helix-turn-helix domain BC3254 PF01804 Penicillin amidase BC3257 PF01471 Putative peptidoglycan binding domain BC3257 PF01476 LysM domain BC3257 PF01510 N-acetylmuramoyl-L-alanine amidase BC3293 PF04634 Protein of unknown function, DUF600 BC3294 PF04740 LXG domain of WXG superfamily BC3307 PF02557 D-alanyl-D-alanine carboxypeptidase BC3308 PF09587 Bacterial capsule synthesis protein PGA_cap BC3309 PF14044 NETI protein BC3310 PF07690 Major Facilitator Superfamily BC3312 PF12697 Alpha/beta hydrolase family BC3313 PF01047 MarR family BC3314 PF07690 Major Facilitator Superfamily BC3316 PF04073 Aminoacyl-tRNA editing domain BC3317 PF13393 Histidyl-tRNA synthetase BC3317 PF03129 Anticodon binding domain BC3320 PF01638 HxlR-like helix-turn-helix BC3321 PF00881 Nitroreductase family BC3323 PF00224 Pyruvate kinase, barrel domain BC3323 PF02887 Pyruvate kinase, alpha/beta domain BC3323 PF00391 PEP-utilising enzyme, mobile domain BC3329 PF00005 ABC transporter BC3334 PF13419 Haloacid dehalogenase-like hydrolase BC3335 PF13350 Tyrosine phosphatase family BC3339 PF13344 Haloacid dehalogenase-like hydrolase BC3339 PF00293 NUDIX domain BC3340 PF00579 tRNA synthetases class I (W and Y) BC3341 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BC3341 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BC3341 PF13288 DXP reductoisomerase C-terminal domain BC3342 PF01594 AI-2E family transporter BC3347 PF08003 Protein of unknown function (DUF1698) BC3349 PF07690 Major Facilitator Superfamily BC3353 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC3355 PF01595 Cyclin M transmembrane N-terminal domain BC3355 PF03471 Transporter associated domain BC3355 PF00571 CBS domain BC3356 PF13411 MerR HTH family regulatory protein BC3358 PF00483 Nucleotidyl transferase BC3359 PF16363 GDP-mannose 4,6 dehydratase BC3360 PF08421 Putative zinc binding domain BC3360 PF08484 C-methyltransferase C-terminal domain BC3361 PF01370 NAD dependent epimerase/dehydratase family BC3364 PF00892 EamA-like transporter family BC3366 PF00805 Pentapeptide repeats (8 copies) BC3367 PF06906 Protein of unknown function (DUF1272) BC3368 PF10282 Lactonase, 7-bladed beta-propeller BC3369 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BC3369 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BC3370 PF02447 GntP family permease BC3371 PF00923 Transaldolase/Fructose-6-phosphate aldolase BC3372 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BC3372 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BC3377 PF08240 Alcohol dehydrogenase GroES-like domain BC3377 PF00107 Zinc-binding dehydrogenase BC3378 PF00296 Luciferase-like monooxygenase BC3380 PF00107 Zinc-binding dehydrogenase BC3380 PF00698 Acyl transferase domain BC3380 PF00550 Phosphopantetheine attachment site BC3380 PF08659 KR domain BC3380 PF02801 Beta-ketoacyl synthase, C-terminal domain BC3380 PF14765 Polyketide synthase dehydratase BC3380 PF16197 Ketoacyl-synthetase C-terminal extension BC3380 PF08240 Alcohol dehydrogenase GroES-like domain BC3380 PF00109 Beta-ketoacyl synthase, N-terminal domain BC3382 PF00106 short chain dehydrogenase BC3383 PF01447 Thermolysin metallopeptidase, catalytic domain BC3383 PF02868 Thermolysin metallopeptidase, alpha-helical domain BC3383 PF07504 Fungalysin/Thermolysin Propeptide Motif BC3383 PF03413 Peptidase propeptide and YPEB domain BC3385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC3385 PF00672 HAMP domain BC3385 PF12729 Four helix bundle sensory module for signal transduction BC3386 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) BC3387 PF01872 RibD C-terminal domain BC3387 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BC3388 PF00925 GTP cyclohydrolase II BC3388 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BC3389 PF01638 HxlR-like helix-turn-helix BC3392 PF00248 Aldo/keto reductase family BC3393 PF07690 Major Facilitator Superfamily BC3395 PF03928 Haem-degrading BC3402 PF03960 ArsC family BC3404 PF01638 HxlR-like helix-turn-helix BC3405 PF00392 Bacterial regulatory proteins, gntR family BC3405 PF07702 UTRA domain BC3406 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BC3406 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BC3408 PF01638 HxlR-like helix-turn-helix BC3409 PF01638 HxlR-like helix-turn-helix BC3410 PF00248 Aldo/keto reductase family BC3418 PF02567 Phenazine biosynthesis-like protein BC3419 PF13193 AMP-binding enzyme C-terminal domain BC3419 PF00501 AMP-binding enzyme BC3420 PF02525 Flavodoxin-like fold BC3421 PF01638 HxlR-like helix-turn-helix BC3423 PF01022 Bacterial regulatory protein, arsR family BC3425 PF12791 Anti-sigma factor N-terminus BC3426 PF04542 Sigma-70 region 2 BC3427 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BC3427 PF00535 Glycosyl transferase family 2 BC3428 PF01810 LysE type translocator BC3435 PF01061 ABC-2 type transporter BC3436 PF00005 ABC transporter BC3436 PF13732 Domain of unknown function (DUF4162) BC3439 PF03063 Prismane/CO dehydrogenase family BC3440 PF00753 Metallo-beta-lactamase superfamily BC3441 PF01471 Putative peptidoglycan binding domain BC3441 PF01183 Glycosyl hydrolases family 25 BC3453 PF00753 Metallo-beta-lactamase superfamily BC3455 PF00324 Amino acid permease BC3456 PF07690 Major Facilitator Superfamily BC3461 PF02585 GlcNAc-PI de-N-acetylase BC3462 PF08830 Protein of unknown function (DUF1806) BC3463 PF03600 Citrate transporter BC3465 PF00583 Acetyltransferase (GNAT) family BC3466 PF01497 Periplasmic binding protein BC3467 PF01032 FecCD transport family BC3468 PF01032 FecCD transport family BC3469 PF05675 Protein of unknown function (DUF817) BC3470 PF13170 Protein of unknown function (DUF4003) BC3473 PF13302 Acetyltransferase (GNAT) domain BC3474 PF10901 Protein of unknown function (DUF2690) BC3476 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC3476 PF03466 LysR substrate binding domain BC3477 PF08240 Alcohol dehydrogenase GroES-like domain BC3477 PF00107 Zinc-binding dehydrogenase BC3480 PF00488 MutS domain V BC3480 PF01713 Smr domain BC3482 PF00128 Alpha amylase, catalytic domain BC3482 PF09154 Domain of unknown function (DUF1939) BC3483 PF00797 N-acetyltransferase BC3484 PF08439 Oligopeptidase F BC3484 PF01432 Peptidase family M3 BC3485 PF04371 Porphyromonas-type peptidyl-arginine deiminase BC3488 PF06146 Phosphate-starvation-inducible E BC3489 PF04371 Porphyromonas-type peptidyl-arginine deiminase BC3490 PF00144 Beta-lactamase BC3493 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC3493 PF03466 LysR substrate binding domain BC3495 PF03009 Glycerophosphoryl diester phosphodiesterase family BC3497 PF01022 Bacterial regulatory protein, arsR family BC3498 PF00107 Zinc-binding dehydrogenase BC3498 PF08240 Alcohol dehydrogenase GroES-like domain BC3499 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BC3501 PF18801 response regulator aspartate phosphatase H, N terminal BC3504 PF02913 FAD linked oxidases, C-terminal domain BC3504 PF01565 FAD binding domain BC3509 PF01066 CDP-alcohol phosphatidyltransferase BC3511 PF00581 Rhodanese-like domain BC3511 PF00753 Metallo-beta-lactamase superfamily BC3512 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC3514 PF00483 Nucleotidyl transferase BC3516 PF01370 NAD dependent epimerase/dehydratase family BC3517 PF16363 GDP-mannose 4,6 dehydratase BC3518 PF18801 response regulator aspartate phosphatase H, N terminal BC3520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC3520 PF00672 HAMP domain BC3520 PF02743 Cache domain BC3522 PF00440 Bacterial regulatory proteins, tetR family BC3523 PF07968 Leukocidin/Hemolysin toxin family BC3524 PF01520 N-acetylmuramoyl-L-alanine amidase BC3524 PF00395 S-layer homology domain BC3528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC3528 PF00512 His Kinase A (phospho-acceptor) domain BC3528 PF00989 PAS fold BC3529 PF08453 Peptidase family M9 N-terminal BC3529 PF01752 Collagenase BC3529 PF18496 Collagenase G catalytic helper subdomain BC3530 PF02308 MgtC family BC3532 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC3533 PF04294 VanW like protein BC3535 PF13039 Protein of unknown function (DUF3900) BC3535 PF13037 Domain of unknown function (DUF3898) BC3539 PF00313 'Cold-shock' DNA-binding domain BC3541 PF00258 Flavodoxin BC3543 PF00293 NUDIX domain BC3545 PF00132 Bacterial transferase hexapeptide (six repeats) BC3548 PF00106 short chain dehydrogenase BC3550 PF00206 Lyase BC3550 PF14698 Argininosuccinate lyase C-terminal BC3552 PF01156 Inosine-uridine preferring nucleoside hydrolase BC3553 PF00474 Sodium:solute symporter family BC3555 PF00171 Aldehyde dehydrogenase family BC3557 PF13243 Squalene-hopene cyclase C-terminal domain BC3557 PF13249 Squalene-hopene cyclase N-terminal domain BC3558 PF02681 Divergent PAP2 family BC3559 PF00892 EamA-like transporter family BC3560 PF06961 Protein of unknown function (DUF1294) BC3563 PF10609 NUBPL iron-transfer P-loop NTPase BC3565 PF02391 MoaE protein BC3566 PF00994 Probable molybdopterin binding domain BC3566 PF03454 MoeA C-terminal region (domain IV) BC3566 PF03453 MoeA N-terminal region (domain I and II) BC3568 PF01226 Formate/nitrite transporter BC3569 PF06463 Molybdenum Cofactor Synthesis C BC3569 PF04055 Radical SAM superfamily BC3570 PF02634 FdhD/NarQ family BC3571 PF10057 Uncharacterized conserved protein (DUF2294) BC3572 PF07849 Protein of unknown function (DUF1641) BC3573 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BC3573 PF00037 4Fe-4S binding domain BC3573 PF00384 Molybdopterin oxidoreductase BC3573 PF01568 Molydopterin dinucleotide binding domain BC3573 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BC3574 PF03323 Bacillus/Clostridium GerA spore germination protein BC3577 PF13520 Amino acid permease BC3583 PF08241 Methyltransferase domain BC3584 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC3585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC3586 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC3587 PF03816 Cell envelope-related transcriptional attenuator domain BC3589 PF08281 Sigma-70, region 4 BC3589 PF04542 Sigma-70 region 2 BC3591 PF00005 ABC transporter BC3591 PF13732 Domain of unknown function (DUF4162) BC3595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BC3595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BC3596 PF00521 DNA gyrase/topoisomerase IV, subunit A BC3596 PF03989 DNA gyrase C-terminal domain, beta-propeller BC3597 PF01751 Toprim domain BC3597 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC3597 PF00986 DNA gyrase B subunit, carboxyl terminus BC3597 PF00204 DNA gyrase B BC3599 PF13380 CoA binding domain BC3600 PF13180 PDZ domain BC3601 PF00072 Response regulator receiver domain BC3601 PF00486 Transcriptional regulatory protein, C terminal BC3602 PF04055 Radical SAM superfamily BC3603 PF13597 Anaerobic ribonucleoside-triphosphate reductase BC3603 PF03477 ATP cone domain BC3604 PF02660 Glycerol-3-phosphate acyltransferase BC3605 PF01521 Iron-sulphur cluster biosynthesis BC3606 PF03061 Thioesterase superfamily BC3607 PF01476 LysM domain BC3607 PF00704 Glycosyl hydrolases family 18 BC3609 PF08177 Small acid-soluble spore protein N family BC3610 PF13040 Fur-regulated basic protein B BC3611 PF00929 Exonuclease BC3611 PF11490 DNA polymerase III polC-type N-terminus II BC3611 PF07733 Bacterial DNA polymerase III alpha NTPase domain BC3611 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BC3611 PF02811 PHP domain BC3611 PF01336 OB-fold nucleic acid binding domain BC3611 PF14579 Helix-hairpin-helix motif BC3612 PF00578 AhpC/TSA family BC3616 PF00694 Aconitase C-terminal domain BC3616 PF00330 Aconitase family (aconitate hydratase) BC3618 PF01522 Polysaccharide deacetylase BC3620 PF08179 Small acid-soluble spore protein P family BC3622 PF07690 Major Facilitator Superfamily BC3625 PF13344 Haloacid dehalogenase-like hydrolase BC3625 PF00293 NUDIX domain BC3627 PF02803 Thiolase, C-terminal domain BC3627 PF00108 Thiolase, N-terminal domain BC3628 PF00501 AMP-binding enzyme BC3628 PF13193 AMP-binding enzyme C-terminal domain BC3629 PF02632 BioY family BC3635 PF05532 CsbD-like BC3639 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC3639 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC3641 PF00512 His Kinase A (phospho-acceptor) domain BC3641 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC3641 PF00989 PAS fold BC3641 PF13188 PAS domain BC3641 PF13426 PAS domain BC3642 PF01738 Dienelactone hydrolase family BC3643 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC3644 PF00474 Sodium:solute symporter family BC3646 PF01645 Conserved region in glutamate synthase BC3647 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BC3648 PF02559 CarD-like/TRCF domain BC3650 PF01979 Amidohydrolase family BC3651 PF17391 Urocanase N-terminal domain BC3651 PF17392 Urocanase C-terminal domain BC3651 PF01175 Urocanase Rossmann-like domain BC3652 PF00221 Aromatic amino acid lyase BC3653 PF09021 HutP BC3660 PF11084 Protein of unknown function (DUF2621) BC3661 PF07301 Protein of unknown function (DUF1453) BC3662 PF02683 Cytochrome C biogenesis protein transmembrane region BC3664 PF07687 Peptidase dimerisation domain BC3664 PF01546 Peptidase family M20/M25/M40 BC3666 PF00005 ABC transporter BC3668 PF03466 LysR substrate binding domain BC3668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC3669 PF03788 LrgA family BC3670 PF04172 LrgB-like family BC3671 PF13344 Haloacid dehalogenase-like hydrolase BC3671 PF00293 NUDIX domain BC3673 PF01925 Sulfite exporter TauE/SafE BC3677 PF08239 Bacterial SH3 domain BC3677 PF01183 Glycosyl hydrolases family 25 BC3678 PF00005 ABC transporter BC3678 PF00664 ABC transporter transmembrane region BC3679 PF00664 ABC transporter transmembrane region BC3679 PF00005 ABC transporter BC3680 PF03672 Uncharacterised protein family (UPF0154) BC3681 PF10747 Sporulation inhibitor of replication protein SirA BC3682 PF00456 Transketolase, thiamine diphosphate binding domain BC3682 PF02779 Transketolase, pyrimidine binding domain BC3682 PF02780 Transketolase, C-terminal domain BC3683 PF00528 Binding-protein-dependent transport system inner membrane component BC3684 PF00528 Binding-protein-dependent transport system inner membrane component BC3685 PF00005 ABC transporter BC3686 PF00497 Bacterial extracellular solute-binding proteins, family 3 BC3687 PF02872 5'-nucleotidase, C-terminal domain BC3687 PF00149 Calcineurin-like phosphoesterase BC3688 PF05979 Bacterial protein of unknown function (DUF896) BC3689 PF00239 Resolvase, N terminal domain BC3690 PF01726 LexA DNA binding domain BC3690 PF00717 Peptidase S24-like BC3693 PF03551 Transcriptional regulator PadR-like family BC3694 PF01510 N-acetylmuramoyl-L-alanine amidase BC3698 PF01464 Transglycosylase SLT domain BC3698 PF01551 Peptidase family M23 BC3698 PF10145 Phage-related minor tail protein BC3704 PF01726 LexA DNA binding domain BC3704 PF00717 Peptidase S24-like BC3706 PF13411 MerR HTH family regulatory protein BC3707 PF06838 Methionine gamma-lyase BC3708 PF16360 GTP-binding GTPase Middle Region BC3708 PF13167 GTP-binding GTPase N-terminal BC3708 PF01926 50S ribosome-binding GTPase BC3709 PF03458 UPF0126 domain BC3713 PF17209 Hfq protein BC3718 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BC3718 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BC3719 PF00294 pfkB family carbohydrate kinase BC3720 PF08220 DeoR-like helix-turn-helix domain BC3720 PF00455 DeoR C terminal sensor domain BC3721 PF00465 Iron-containing alcohol dehydrogenase BC3722 PF04238 Protein of unknown function (DUF420) BC3724 PF00324 Amino acid permease BC3725 PF00704 Glycosyl hydrolases family 18 BC3725 PF00041 Fibronectin type III domain BC3726 PF10518 TAT (twin-arginine translocation) pathway signal sequence BC3726 PF00149 Calcineurin-like phosphoesterase BC3727 PF01226 Formate/nitrite transporter BC3728 PF00216 Bacterial DNA-binding protein BC3730 PF00403 Heavy-metal-associated domain BC3731 PF00403 Heavy-metal-associated domain BC3732 PF02583 Metal-sensitive transcriptional repressor BC3734 PF00756 Putative esterase BC3735 PF00005 ABC transporter BC3736 PF01032 FecCD transport family BC3737 PF01032 FecCD transport family BC3738 PF01497 Periplasmic binding protein BC3739 PF03372 Endonuclease/Exonuclease/phosphatase family BC3740 PF12833 Helix-turn-helix domain BC3740 PF02805 Metal binding domain of Ada BC3741 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BC3741 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BC3742 PF00730 HhH-GPD superfamily base excision DNA repair protein BC3742 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BC3743 PF01546 Peptidase family M20/M25/M40 BC3743 PF07687 Peptidase dimerisation domain BC3746 PF00561 alpha/beta hydrolase fold BC3747 PF00563 EAL domain BC3747 PF00990 Diguanylate cyclase, GGDEF domain BC3747 PF03707 Bacterial signalling protein N terminal repeat BC3748 PF04101 Glycosyltransferase family 28 C-terminal domain BC3748 PF03033 Glycosyltransferase family 28 N-terminal domain BC3749 PF16363 GDP-mannose 4,6 dehydratase BC3750 PF02719 Polysaccharide biosynthesis protein BC3750 PF08485 Polysaccharide biosynthesis protein C-terminal BC3753 PF10787 Uncharacterised protein from bacillus cereus group BC3754 PF04172 LrgB-like family BC3755 PF03788 LrgA family BC3756 PF00155 Aminotransferase class I and II BC3756 PF00392 Bacterial regulatory proteins, gntR family BC3759 PF00232 Glycosyl hydrolase family 1 BC3760 PF00232 Glycosyl hydrolase family 1 BC3761 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BC3762 PF00082 Subtilase family BC3765 PF00884 Sulfatase BC3766 PF00350 Dynamin family BC3768 PF01119 DNA mismatch repair protein, C-terminal domain BC3768 PF08676 MutL C terminal dimerisation domain BC3769 PF05188 MutS domain II BC3769 PF01624 MutS domain I BC3769 PF05190 MutS family domain IV BC3769 PF00488 MutS domain V BC3769 PF05192 MutS domain III BC3770 PF10628 Outer spore coat protein E (CotE) BC3771 PF06133 Control of competence regulator ComK, YlbF/YmcA BC3772 PF00919 Uncharacterized protein family UPF0004 BC3772 PF01938 TRAM domain BC3772 PF04055 Radical SAM superfamily BC3773 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BC3774 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BC3774 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BC3774 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BC3775 PF01244 Membrane dipeptidase (Peptidase family M19) BC3776 PF04232 Stage V sporulation protein S (SpoVS) BC3777 PF13277 YmdB-like protein BC3778 PF00013 KH domain BC3778 PF12072 Domain of unknown function (DUF3552) BC3778 PF01966 HD domain BC3779 PF00154 recA bacterial DNA recombination protein BC3780 PF18146 Damage-inducible protein CinA KH domain BC3780 PF00994 Probable molybdopterin binding domain BC3780 PF02464 Competence-damaged protein BC3781 PF01066 CDP-alcohol phosphatidyltransferase BC3782 PF13464 Domain of unknown function (DUF4115) BC3783 PF11868 Protein of unknown function (DUF3388) BC3784 PF11588 Protein of unknown function (DUF3243) BC3786 PF05193 Peptidase M16 inactive domain BC3786 PF00675 Insulinase (Peptidase family M16) BC3787 PF05193 Peptidase M16 inactive domain BC3788 PF02653 Branched-chain amino acid transport system / permease component BC3790 PF00005 ABC transporter BC3791 PF02608 ABC transporter substrate-binding protein PnrA-like BC3792 PF07702 UTRA domain BC3792 PF00392 Bacterial regulatory proteins, gntR family BC3793 PF01580 FtsK/SpoIIIE family BC3793 PF09397 Ftsk gamma domain BC3793 PF17854 FtsK alpha domain BC3794 PF14035 YlzJ-like protein BC3795 PF00574 Clp protease BC3796 PF17770 Ribonuclease J C-terminal domain BC3796 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BC3796 PF00753 Metallo-beta-lactamase superfamily BC3797 PF00701 Dihydrodipicolinate synthetase family BC3798 PF00696 Amino acid kinase family BC3798 PF13840 ACT domain BC3799 PF01118 Semialdehyde dehydrogenase, NAD binding domain BC3799 PF02774 Semialdehyde dehydrogenase, dimerisation domain BC3800 PF02441 Flavoprotein BC3801 PF16924 Dipicolinate synthase subunit A N-terminal domain BC3801 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BC3802 PF05239 PRC-barrel domain BC3803 PF00675 Insulinase (Peptidase family M16) BC3803 PF05193 Peptidase M16 inactive domain BC3804 PF01522 Polysaccharide deacetylase BC3805 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BC3805 PF01138 3' exoribonuclease family, domain 1 BC3805 PF00013 KH domain BC3805 PF03725 3' exoribonuclease family, domain 2 BC3805 PF00575 S1 RNA binding domain BC3806 PF00312 Ribosomal protein S15 BC3807 PF01687 Riboflavin kinase BC3807 PF06574 FAD synthetase BC3808 PF01509 TruB family pseudouridylate synthase (N terminal domain) BC3808 PF16198 tRNA pseudouridylate synthase B C-terminal domain BC3809 PF02033 Ribosome-binding factor A BC3810 PF04456 Protein of unknown function (DUF503) BC3811 PF04760 Translation initiation factor IF-2, N-terminal region BC3811 PF11987 Translation-initiation factor 2 BC3811 PF00009 Elongation factor Tu GTP binding domain BC3812 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BC3813 PF04296 Protein of unknown function (DUF448) BC3814 PF08529 NusA N-terminal domain BC3814 PF00575 S1 RNA binding domain BC3814 PF13184 NusA-like KH domain BC3815 PF02576 RimP N-terminal domain BC3815 PF17384 RimP C-terminal SH3 domain BC3816 PF07733 Bacterial DNA polymerase III alpha NTPase domain BC3816 PF14480 DNA polymerase III polC-type N-terminus I BC3816 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BC3816 PF14579 Helix-hairpin-helix motif BC3816 PF00929 Exonuclease BC3816 PF02811 PHP domain BC3816 PF11490 DNA polymerase III polC-type N-terminus II BC3817 PF03129 Anticodon binding domain BC3817 PF04073 Aminoacyl-tRNA editing domain BC3817 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BC3819 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BC3819 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BC3819 PF13288 DXP reductoisomerase C-terminal domain BC3821 PF01255 Putative undecaprenyl diphosphate synthase BC3822 PF01765 Ribosome recycling factor BC3823 PF00696 Amino acid kinase family BC3824 PF00889 Elongation factor TS BC3825 PF00318 Ribosomal protein S2 BC3826 PF06018 CodY GAF-like domain BC3826 PF08222 CodY helix-turn-helix domain BC3827 PF00004 ATPase family associated with various cellular activities (AAA) BC3827 PF07724 AAA domain (Cdc48 subfamily) BC3827 PF10431 C-terminal, D2-small domain, of ClpB protein BC3828 PF00227 Proteasome subunit BC3829 PF00589 Phage integrase family BC3829 PF02899 Phage integrase, N-terminal SAM-like domain BC3830 PF01134 Glucose inhibited division protein A BC3831 PF01131 DNA topoisomerase BC3831 PF01751 Toprim domain BC3831 PF01396 Topoisomerase DNA binding C4 zinc finger BC3832 PF02481 DNA recombination-mediator protein A BC3833 PF00549 CoA-ligase BC3833 PF02629 CoA binding domain BC3834 PF00549 CoA-ligase BC3834 PF08442 ATP-grasp domain BC3835 PF01351 Ribonuclease HII BC3836 PF01926 50S ribosome-binding GTPase BC3837 PF10502 Signal peptidase, peptidase S26 BC3838 PF01245 Ribosomal protein L19 BC3839 PF01746 tRNA (Guanine-1)-methyltransferase BC3840 PF05239 PRC-barrel domain BC3840 PF01782 RimM N-terminal domain BC3842 PF00886 Ribosomal protein S16 BC3843 PF02881 SRP54-type protein, helical bundle domain BC3843 PF02978 Signal peptide binding domain BC3843 PF00448 SRP54-type protein, GTPase domain BC3844 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BC3845 PF00448 SRP54-type protein, GTPase domain BC3845 PF02881 SRP54-type protein, helical bundle domain BC3846 PF02463 RecF/RecN/SMC N terminal domain BC3846 PF06470 SMC proteins Flexible Hinge Domain BC3847 PF00035 Double-stranded RNA binding motif BC3847 PF14622 Ribonuclease-III-like BC3848 PF00550 Phosphopantetheine attachment site BC3850 PF00698 Acyl transferase domain BC3851 PF02504 Fatty acid synthesis protein BC3852 PF03061 Thioesterase superfamily BC3853 PF17191 RecG wedge domain BC3853 PF00271 Helicase conserved C-terminal domain BC3853 PF00270 DEAD/DEAH box helicase BC3854 PF13684 Dihydroxyacetone kinase family BC3854 PF02734 DAK2 domain BC3855 PF03780 Asp23 family, cell envelope-related function BC3856 PF00830 Ribosomal L28 family BC3857 PF04263 Thiamin pyrophosphokinase, catalytic domain BC3857 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BC3858 PF00834 Ribulose-phosphate 3 epimerase family BC3859 PF03193 RsgA GTPase BC3859 PF16745 RsgA N-terminal domain BC3860 PF03793 PASTA domain BC3860 PF00069 Protein kinase domain BC3862 PF04055 Radical SAM superfamily BC3863 PF01189 16S rRNA methyltransferase RsmB/F BC3863 PF01029 NusB family BC3864 PF02911 Formyl transferase, C-terminal domain BC3864 PF00551 Formyl transferase BC3865 PF01327 Polypeptide deformylase BC3866 PF17764 3′ DNA-binding domain (3′BD) BC3866 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BC3866 PF00271 Helicase conserved C-terminal domain BC3866 PF18074 Primosomal protein N C-terminal domain BC3866 PF04851 Type III restriction enzyme, res subunit BC3867 PF02441 Flavoprotein BC3867 PF04127 DNA / pantothenate metabolism flavoprotein BC3868 PF01192 RNA polymerase Rpb6 BC3869 PF00625 Guanylate kinase BC3870 PF04025 Domain of unknown function (DUF370) BC3871 PF08340 Domain of unknown function (DUF1732) BC3871 PF03755 YicC-like family, N-terminal region BC3873 PF05670 NFACT protein RNA binding domain BC3875 PF00557 Metallopeptidase family M24 BC3875 PF01321 Creatinase/Prolidase N-terminal domain BC3882 PF00156 Phosphoribosyl transferase domain BC3883 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BC3884 PF01180 Dihydroorotate dehydrogenase BC3885 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BC3886 PF02142 MGS-like domain BC3886 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BC3886 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BC3887 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BC3887 PF00117 Glutamine amidotransferase class-I BC3888 PF01979 Amidohydrolase family BC3889 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BC3889 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BC3890 PF00860 Permease family BC3891 PF00156 Phosphoribosyl transferase domain BC3892 PF00849 RNA pseudouridylate synthase BC3892 PF01479 S4 domain BC3893 PF01252 Signal peptidase (SPase) II BC3895 PF06827 Zinc finger found in FPG and IleRS BC3895 PF08264 Anticodon-binding domain of tRNA BC3895 PF00133 tRNA synthetases class I (I, L, M and V) BC3896 PF05103 DivIVA protein BC3897 PF17774 Putative RNA-binding domain in YlmH BC3897 PF01479 S4 domain BC3898 PF02325 YGGT family BC3899 PF04472 Cell division protein SepF BC3900 PF01168 Alanine racemase, N-terminal domain BC3901 PF02578 Multi-copper polyphenol oxidoreductase laccase BC3902 PF05239 PRC-barrel domain BC3903 PF04539 Sigma-70 region 3 BC3903 PF04542 Sigma-70 region 2 BC3903 PF04545 Sigma-70, region 4 BC3904 PF04545 Sigma-70, region 4 BC3904 PF04542 Sigma-70 region 2 BC3905 PF03419 Sporulation factor SpoIIGA BC3906 PF00091 Tubulin/FtsZ family, GTPase domain BC3906 PF12327 FtsZ family, C-terminal domain BC3907 PF02491 SHS2 domain inserted in FTSA BC3908 PF03799 Cell division protein FtsQ BC3908 PF08478 POTRA domain, FtsQ-type BC3909 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BC3909 PF01565 FAD binding domain BC3910 PF03033 Glycosyltransferase family 28 N-terminal domain BC3910 PF04101 Glycosyltransferase family 28 C-terminal domain BC3911 PF01098 Cell cycle protein BC3912 PF08245 Mur ligase middle domain BC3912 PF02875 Mur ligase family, glutamate ligase domain BC3913 PF00953 Glycosyl transferase family 4 BC3913 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BC3914 PF08245 Mur ligase middle domain BC3914 PF01225 Mur ligase family, catalytic domain BC3914 PF02875 Mur ligase family, glutamate ligase domain BC3915 PF03793 PASTA domain BC3915 PF00905 Penicillin binding protein transpeptidase domain BC3915 PF03717 Penicillin-binding Protein dimerisation domain BC3916 PF03793 PASTA domain BC3916 PF03717 Penicillin-binding Protein dimerisation domain BC3916 PF00905 Penicillin binding protein transpeptidase domain BC3917 PF04977 Septum formation initiator BC3918 PF01795 MraW methylase family BC3919 PF10079 Bacillithiol biosynthesis BshC BC3920 PF02558 Ketopantoate reductase PanE/ApbA BC3920 PF08546 Ketopantoate reductase PanE/ApbA C terminal BC3921 PF00583 Acetyltransferase (GNAT) family BC3923 PF01783 Ribosomal L32p protein family BC3924 PF02620 Large ribosomal RNA subunit accumulation protein YceD BC3926 PF05362 Lon protease (S16) C-terminal proteolytic domain BC3926 PF13180 PDZ domain BC3927 PF01734 Patatin-like phospholipase BC3928 PF07670 Nucleoside recognition BC3929 PF01467 Cytidylyltransferase-like BC3932 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BC3933 PF06133 Control of competence regulator ComK, YlbF/YmcA BC3934 PF00300 Histidine phosphatase superfamily (branch 1) BC3935 PF14003 YlbE-like protein BC3936 PF14071 Putative coat protein BC3937 PF00188 Cysteine-rich secretory protein family BC3937 PF14504 CAP-associated N-terminal BC3938 PF08868 YugN-like family BC3939 PF00795 Carbon-nitrogen hydrolase BC3940 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BC3941 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BC3942 PF00510 Cytochrome c oxidase subunit III BC3943 PF00115 Cytochrome C and Quinol oxidase polypeptide I BC3944 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BC3944 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BC3944 PF00034 Cytochrome c BC3945 PF01040 UbiA prenyltransferase family BC3946 PF02628 Cytochrome oxidase assembly protein BC3947 PF00289 Biotin carboxylase, N-terminal domain BC3947 PF00682 HMGL-like BC3947 PF02785 Biotin carboxylase C-terminal domain BC3947 PF02436 Conserved carboxylase domain BC3947 PF00364 Biotin-requiring enzyme BC3947 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BC3948 PF01098 Cell cycle protein BC3949 PF07408 Protein of unknown function (DUF1507) BC3951 PF02562 PhoH-like protein BC3951 PF13638 PIN domain BC3953 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BC3955 PF14036 YlaH-like protein BC3956 PF03144 Elongation factor Tu domain 2 BC3956 PF00679 Elongation factor G C-terminus BC3956 PF14492 Elongation Factor G, domain II BC3956 PF00009 Elongation factor Tu GTP binding domain BC3958 PF00459 Inositol monophosphatase family BC3960 PF06335 Protein of unknown function (DUF1054) BC3961 PF05256 Uncharacterised protein family (UPF0223) BC3962 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BC3962 PF01276 Orn/Lys/Arg decarboxylase, major domain BC3970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BC3970 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC3971 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BC3971 PF00364 Biotin-requiring enzyme BC3971 PF02817 e3 binding domain BC3972 PF02780 Transketolase, C-terminal domain BC3972 PF02779 Transketolase, pyrimidine binding domain BC3973 PF00676 Dehydrogenase E1 component BC3974 PF01327 Polypeptide deformylase BC3976 PF07288 Protein of unknown function (DUF1447) BC3977 PF00753 Metallo-beta-lactamase superfamily BC3977 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BC3977 PF17770 Ribonuclease J C-terminal domain BC3978 PF02080 TrkA-C domain BC3978 PF02254 TrkA-N domain BC3980 PF01546 Peptidase family M20/M25/M40 BC3980 PF07687 Peptidase dimerisation domain BC3981 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BC3981 PF00132 Bacterial transferase hexapeptide (six repeats) BC3981 PF14602 Hexapeptide repeat of succinyl-transferase BC3982 PF03466 LysR substrate binding domain BC3982 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC3985 PF04308 Ribonuclease H-like BC3986 PF08796 Protein of unknown function (DUF1797) BC3989 PF00563 EAL domain BC3989 PF10388 EAL-domain associated signalling protein domain BC3991 PF00149 Calcineurin-like phosphoesterase BC3991 PF10518 TAT (twin-arginine translocation) pathway signal sequence BC3993 PF13090 Polyphosphate kinase C-terminal domain 2 BC3993 PF02503 Polyphosphate kinase middle domain BC3993 PF13089 Polyphosphate kinase N-terminal domain BC3993 PF17941 Polyphosphate kinase C-terminal domain 1 BC3994 PF02541 Ppx/GppA phosphatase family BC3995 PF14177 YkyB-like protein BC4000 PF07690 Major Facilitator Superfamily BC4003 PF01717 Cobalamin-independent synthase, Catalytic domain BC4003 PF08267 Cobalamin-independent synthase, N-terminal domain BC4005 PF14040 Deoxyribonuclease NucA/NucB BC4007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC4007 PF00512 His Kinase A (phospho-acceptor) domain BC4009 PF00155 Aminotransferase class I and II BC4010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BC4010 PF00356 Bacterial regulatory proteins, lacI family BC4011 PF00528 Binding-protein-dependent transport system inner membrane component BC4012 PF00528 Binding-protein-dependent transport system inner membrane component BC4014 PF00128 Alpha amylase, catalytic domain BC4014 PF02903 Alpha amylase, N-terminal ig-like domain BC4014 PF16657 Maltogenic Amylase, C-terminal domain BC4015 PF00128 Alpha amylase, catalytic domain BC4015 PF16657 Maltogenic Amylase, C-terminal domain BC4016 PF00005 ABC transporter BC4016 PF17912 MalK OB fold domain BC4016 PF03459 TOBE domain BC4023 PF02803 Thiolase, C-terminal domain BC4023 PF00108 Thiolase, N-terminal domain BC4024 PF00293 NUDIX domain BC4029 PF03551 Transcriptional regulator PadR-like family BC4032 PF01008 Initiation factor 2 subunit family BC4033 PF01636 Phosphotransferase enzyme family BC4034 PF00795 Carbon-nitrogen hydrolase BC4035 PF00155 Aminotransferase class I and II BC4036 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BC4036 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BC4038 PF00596 Class II Aldolase and Adducin N-terminal domain BC4039 PF03079 ARD/ARD' family BC4042 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BC4042 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BC4043 PF00144 Beta-lactamase BC4044 PF08448 PAS fold BC4044 PF00990 Diguanylate cyclase, GGDEF domain BC4045 PF00881 Nitroreductase family BC4048 PF05524 PEP-utilising enzyme, N-terminal BC4048 PF00391 PEP-utilising enzyme, mobile domain BC4048 PF02896 PEP-utilising enzyme, TIM barrel domain BC4049 PF00381 PTS HPr component phosphorylation site BC4050 PF00367 phosphotransferase system, EIIB BC4050 PF02378 Phosphotransferase system, EIIC BC4050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BC4051 PF03123 CAT RNA binding domain BC4051 PF00874 PRD domain BC4053 PF00392 Bacterial regulatory proteins, gntR family BC4053 PF07702 UTRA domain BC4054 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BC4055 PF01979 Amidohydrolase family BC4057 PF04079 Segregation and condensation complex subunit ScpB BC4058 PF02616 Segregation and condensation protein ScpA BC4059 PF03745 Domain of unknown function (DUF309) BC4060 PF00583 Acetyltransferase (GNAT) family BC4061 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BC4062 PF06207 Protein of unknown function (DUF1002) BC4064 PF03323 Bacillus/Clostridium GerA spore germination protein BC4065 PF14097 Stage V sporulation protein AE1 BC4066 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BC4067 PF07451 Stage V sporulation protein AD (SpoVAD) BC4068 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BC4069 PF13782 Stage V sporulation protein AB BC4070 PF12164 Stage V sporulation protein AA BC4071 PF00209 Sodium:neurotransmitter symporter family BC4072 PF04542 Sigma-70 region 2 BC4072 PF04545 Sigma-70, region 4 BC4072 PF04539 Sigma-70 region 3 BC4073 PF13581 Histidine kinase-like ATPase domain BC4074 PF01740 STAS domain BC4075 PF07943 Penicillin-binding protein 5, C-terminal domain BC4075 PF00768 D-alanyl-D-alanine carboxypeptidase BC4076 PF00392 Bacterial regulatory proteins, gntR family BC4077 PF00005 ABC transporter BC4081 PF01047 MarR family BC4083 PF00860 Permease family BC4084 PF01544 CorA-like Mg2+ transporter protein BC4085 PF02885 Glycosyl transferase family, helical bundle domain BC4085 PF00591 Glycosyl transferase family, a/b domain BC4085 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BC4086 PF01048 Phosphorylase superfamily BC4087 PF01676 Metalloenzyme superfamily BC4088 PF13115 YtkA-like BC4089 PF00589 Phage integrase family BC4089 PF02899 Phage integrase, N-terminal SAM-like domain BC4090 PF14004 Protein of unknown function (DUF4227) BC4091 PF01475 Ferric uptake regulator family BC4092 PF01944 Stage II sporulation protein M BC4094 PF00293 NUDIX domain BC4095 PF13072 Mother cell inhibitor of FtsZ BC4096 PF00248 Aldo/keto reductase family BC4097 PF00248 Aldo/keto reductase family BC4098 PF04229 GrpB protein BC4098 PF13673 Acetyltransferase (GNAT) domain BC4100 PF00565 Staphylococcal nuclease homologue BC4100 PF00149 Calcineurin-like phosphoesterase BC4100 PF00746 LPXTG cell wall anchor motif BC4100 PF02872 5'-nucleotidase, C-terminal domain BC4102 PF12146 Serine aminopeptidase, S33 BC4103 PF13726 Na+-H+ antiporter family BC4103 PF03553 Na+/H+ antiporter family BC4104 PF00356 Bacterial regulatory proteins, lacI family BC4105 PF00583 Acetyltransferase (GNAT) family BC4106 PF12146 Serine aminopeptidase, S33 BC4107 PF10827 Protein of unknown function (DUF2552) BC4109 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BC4109 PF01872 RibD C-terminal domain BC4110 PF00677 Lumazine binding domain BC4111 PF00925 GTP cyclohydrolase II BC4111 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BC4112 PF00885 6,7-dimethyl-8-ribityllumazine synthase BC4114 PF06968 Biotin and Thiamin Synthesis associated domain BC4114 PF04055 Radical SAM superfamily BC4115 PF13847 Methyltransferase domain BC4116 PF08241 Methyltransferase domain BC4116 PF12697 Alpha/beta hydrolase family BC4117 PF00155 Aminotransferase class I and II BC4119 PF00202 Aminotransferase class-III BC4121 PF03553 Na+/H+ antiporter family BC4124 PF13404 AsnC-type helix-turn-helix domain BC4124 PF01037 Lrp/AsnC ligand binding domain BC4126 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BC4126 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BC4127 PF00202 Aminotransferase class-III BC4128 PF00696 Amino acid kinase family BC4129 PF01960 ArgJ family BC4133 PF00753 Metallo-beta-lactamase superfamily BC4134 PF03807 NADP oxidoreductase coenzyme F420-dependent BC4134 PF14748 Pyrroline-5-carboxylate reductase dimerisation BC4135 PF03313 Serine dehydratase alpha chain BC4136 PF01842 ACT domain BC4136 PF03315 Serine dehydratase beta chain BC4138 PF12706 Beta-lactamase superfamily domain BC4138 PF00753 Metallo-beta-lactamase superfamily BC4140 PF00690 Cation transporter/ATPase, N-terminus BC4140 PF00689 Cation transporting ATPase, C-terminus BC4141 PF02308 MgtC family BC4142 PF11799 impB/mucB/samB family C-terminal domain BC4142 PF11798 IMS family HHH motif BC4142 PF00817 impB/mucB/samB family BC4143 PF07687 Peptidase dimerisation domain BC4143 PF01546 Peptidase family M20/M25/M40 BC4144 PF13302 Acetyltransferase (GNAT) domain BC4146 PF03734 L,D-transpeptidase catalytic domain BC4147 PF06081 Aromatic acid exporter family member 1 BC4147 PF11728 Putative aromatic acid exporter C-terminal domain BC4148 PF00005 ABC transporter BC4149 PF00528 Binding-protein-dependent transport system inner membrane component BC4150 PF00497 Bacterial extracellular solute-binding proteins, family 3 BC4151 PF06491 Disulphide isomerase BC4152 PF11208 Protein of unknown function (DUF2992) BC4153 PF00293 NUDIX domain BC4153 PF09297 NADH pyrophosphatase zinc ribbon domain BC4154 PF04239 Protein of unknown function (DUF421) BC4155 PF01098 Cell cycle protein BC4157 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BC4157 PF00364 Biotin-requiring enzyme BC4157 PF02817 e3 binding domain BC4158 PF02780 Transketolase, C-terminal domain BC4158 PF02779 Transketolase, pyrimidine binding domain BC4159 PF00676 Dehydrogenase E1 component BC4160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BC4160 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC4161 PF00871 Acetokinase family BC4162 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BC4162 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BC4163 PF01515 Phosphate acetyl/butaryl transferase BC4165 PF00158 Sigma-54 interaction domain BC4165 PF00989 PAS fold BC4165 PF02954 Bacterial regulatory protein, Fis family BC4167 PF03009 Glycerophosphoryl diester phosphodiesterase family BC4168 PF14174 YycC-like protein BC4170 PF08769 Sporulation initiation factor Spo0A C terminal BC4170 PF00072 Response regulator receiver domain BC4172 PF17820 PDZ domain BC4172 PF05580 SpoIVB peptidase S55 BC4174 PF01316 Arginine repressor, DNA binding domain BC4174 PF02863 Arginine repressor, C-terminal domain BC4175 PF01728 FtsJ-like methyltransferase BC4175 PF01479 S4 domain BC4176 PF02779 Transketolase, pyrimidine binding domain BC4176 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BC4176 PF02780 Transketolase, C-terminal domain BC4177 PF00348 Polyprenyl synthetase BC4178 PF02609 Exonuclease VII small subunit BC4179 PF02601 Exonuclease VII, large subunit BC4179 PF13742 OB-fold nucleic acid binding domain BC4180 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BC4180 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BC4181 PF01029 NusB family BC4182 PF03780 Asp23 family, cell envelope-related function BC4183 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BC4183 PF00289 Biotin carboxylase, N-terminal domain BC4183 PF02785 Biotin carboxylase C-terminal domain BC4184 PF00364 Biotin-requiring enzyme BC4186 PF12685 SpoIIIAH-like protein BC4188 PF09581 Stage III sporulation protein AF (Spore_III_AF) BC4189 PF09546 Stage III sporulation protein AE (spore_III_AE) BC4190 PF06686 Stage III sporulation protein AC/AD protein family BC4191 PF06686 Stage III sporulation protein AC/AD protein family BC4192 PF09548 Stage III sporulation protein AB (spore_III_AB) BC4197 PF09285 Elongation factor P, C-terminal BC4197 PF08207 Elongation factor P (EF-P) KOW-like domain BC4197 PF01132 Elongation factor P (EF-P) OB domain BC4198 PF01321 Creatinase/Prolidase N-terminal domain BC4198 PF00557 Metallopeptidase family M24 BC4199 PF01220 Dehydroquinase class II BC4200 PF11085 Conserved membrane protein YqhR BC4201 PF07136 Protein of unknown function (DUF1385) BC4203 PF13419 Haloacid dehalogenase-like hydrolase BC4204 PF01325 Iron dependent repressor, N-terminal DNA binding domain BC4204 PF02742 Iron dependent repressor, metal binding and dimerisation domain BC4209 PF03099 Biotin/lipoate A/B protein ligase family BC4210 PF00581 Rhodanese-like domain BC4211 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BC4211 PF00356 Bacterial regulatory proteins, lacI family BC4213 PF00893 Small Multidrug Resistance protein BC4214 PF00893 Small Multidrug Resistance protein BC4221 PF00005 ABC transporter BC4222 PF00392 Bacterial regulatory proteins, gntR family BC4224 PF02347 Glycine cleavage system P-protein BC4225 PF02347 Glycine cleavage system P-protein BC4226 PF01571 Aminomethyltransferase folate-binding domain BC4226 PF08669 Glycine cleavage T-protein C-terminal barrel domain BC4227 PF00176 SNF2 family N-terminal domain BC4227 PF00271 Helicase conserved C-terminal domain BC4228 PF11079 Bacterial protein YqhG of unknown function BC4231 PF14038 YqzE-like protein BC4232 PF01202 Shikimate kinase BC4238 PF00482 Type II secretion system (T2SS), protein F BC4239 PF00437 Type II/IV secretion system protein BC4241 PF11117 Protein of unknown function (DUF2626) BC4242 PF00375 Sodium:dicarboxylate symporter family BC4249 PF04101 Glycosyltransferase family 28 C-terminal domain BC4249 PF03033 Glycosyltransferase family 28 N-terminal domain BC4250 PF02574 Homocysteine S-methyltransferase BC4250 PF02607 B12 binding domain BC4250 PF02310 B12 binding domain BC4250 PF00809 Pterin binding enzyme BC4250 PF02965 Vitamin B12 dependent methionine synthase, activation domain BC4251 PF02574 Homocysteine S-methyltransferase BC4251 PF02219 Methylenetetrahydrofolate reductase BC4253 PF01053 Cys/Met metabolism PLP-dependent enzyme BC4254 PF01053 Cys/Met metabolism PLP-dependent enzyme BC4256 PF01022 Bacterial regulatory protein, arsR family BC4258 PF00753 Metallo-beta-lactamase superfamily BC4259 PF10958 Protein of unknown function (DUF2759) BC4260 PF00480 ROK family BC4261 PF06014 Bacterial protein of unknown function (DUF910) BC4262 PF01812 5-formyltetrahydrofolate cyclo-ligase family BC4263 PF00471 Ribosomal protein L33 BC4264 PF00483 Nucleotidyl transferase BC4265 PF01895 PhoU domain BC4266 PF00005 ABC transporter BC4267 PF00528 Binding-protein-dependent transport system inner membrane component BC4268 PF00528 Binding-protein-dependent transport system inner membrane component BC4269 PF12849 PBP superfamily domain BC4270 PF03717 Penicillin-binding Protein dimerisation domain BC4270 PF00905 Penicillin binding protein transpeptidase domain BC4271 PF07690 Major Facilitator Superfamily BC4272 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BC4272 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BC4274 PF06691 Protein of unknown function (DUF1189) BC4276 PF04551 GcpE protein BC4277 PF01475 Ferric uptake regulator family BC4278 PF00950 ABC 3 transport family BC4279 PF00005 ABC transporter BC4280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC4280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC4281 PF11116 Protein of unknown function (DUF2624) BC4282 PF01261 Xylose isomerase-like TIM barrel BC4283 PF00271 Helicase conserved C-terminal domain BC4283 PF00270 DEAD/DEAH box helicase BC4286 PF01784 NIF3 (NGG1p interacting factor 3) BC4287 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BC4288 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BC4289 PF00140 Sigma-70 factor, region 1.2 BC4289 PF03979 Sigma-70 factor, region 1.1 BC4289 PF04545 Sigma-70, region 4 BC4289 PF04539 Sigma-70 region 3 BC4289 PF04542 Sigma-70 region 2 BC4290 PF08275 DNA primase catalytic core, N-terminal domain BC4290 PF10410 DnaB-helicase binding domain of primase BC4290 PF01807 CHC2 zinc finger BC4293 PF03618 Kinase/pyrophosphorylase BC4294 PF08279 HTH domain BC4294 PF00571 CBS domain BC4295 PF02565 Recombination protein O C terminal BC4295 PF11967 Recombination protein O N terminal BC4297 PF07650 KH domain BC4297 PF01926 50S ribosome-binding GTPase BC4298 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BC4299 PF01219 Prokaryotic diacylglycerol kinase BC4300 PF02130 Uncharacterized protein family UPF0054 BC4301 PF07697 7TM-HD extracellular BC4301 PF07698 7TM receptor with intracellular HD hydrolase BC4301 PF01966 HD domain BC4302 PF02562 PhoH-like protein BC4303 PF06898 Putative stage IV sporulation protein YqfD BC4304 PF07873 YabP family BC4306 PF09424 Yqey-like protein BC4307 PF01165 Ribosomal protein S21 BC4308 PF01938 TRAM domain BC4308 PF00919 Uncharacterized protein family UPF0004 BC4308 PF04055 Radical SAM superfamily BC4309 PF04452 RNA methyltransferase BC4311 PF00684 DnaJ central domain BC4311 PF00226 DnaJ domain BC4311 PF01556 DnaJ C terminal domain BC4312 PF00012 Hsp70 protein BC4313 PF01025 GrpE BC4314 PF01628 HrcA protein C terminal domain BC4315 PF06969 HemN C-terminal domain BC4315 PF04055 Radical SAM superfamily BC4316 PF01638 HxlR-like helix-turn-helix BC4317 PF00679 Elongation factor G C-terminus BC4317 PF00009 Elongation factor Tu GTP binding domain BC4317 PF06421 GTP-binding protein LepA C-terminus BC4317 PF03144 Elongation factor Tu domain 2 BC4319 PF03418 Germination protease BC4320 PF01649 Ribosomal protein S20 BC4321 PF06144 DNA polymerase III, delta subunit BC4322 PF13567 Domain of unknown function (DUF4131) BC4322 PF03772 Competence protein BC4322 PF00753 Metallo-beta-lactamase superfamily BC4323 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BC4324 PF10531 SLBB domain BC4325 PF03807 NADP oxidoreductase coenzyme F420-dependent BC4325 PF14748 Pyrroline-5-carboxylate reductase dimerisation BC4326 PF13649 Methyltransferase domain BC4328 PF01966 HD domain BC4329 PF01467 Cytidylyltransferase-like BC4331 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BC4331 PF01488 Shikimate / quinate 5-dehydrogenase BC4331 PF08501 Shikimate dehydrogenase substrate binding domain BC4332 PF01926 50S ribosome-binding GTPase BC4335 PF02666 Phosphatidylserine decarboxylase BC4336 PF04545 Sigma-70, region 4 BC4336 PF04542 Sigma-70 region 2 BC4339 PF00471 Ribosomal protein L33 BC4340 PF00881 Nitroreductase family BC4341 PF04607 Region found in RelA / SpoT proteins BC4343 PF00245 Alkaline phosphatase BC4344 PF00583 Acetyltransferase (GNAT) family BC4345 PF08386 TAP-like protein BC4345 PF00561 alpha/beta hydrolase fold BC4351 PF00082 Subtilase family BC4351 PF02225 PA domain BC4351 PF13860 FlgD Ig-like domain BC4351 PF05922 Peptidase inhibitor I9 BC4352 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BC4354 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC4355 PF07681 DoxX BC4361 PF00005 ABC transporter BC4362 PF01032 FecCD transport family BC4363 PF01497 Periplasmic binding protein BC4364 PF14143 YrhC-like protein BC4365 PF00465 Iron-containing alcohol dehydrogenase BC4365 PF00171 Aldehyde dehydrogenase family BC4366 PF01053 Cys/Met metabolism PLP-dependent enzyme BC4367 PF00291 Pyridoxal-phosphate dependent enzyme BC4368 PF01048 Phosphorylase superfamily BC4369 PF08241 Methyltransferase domain BC4372 PF03717 Penicillin-binding Protein dimerisation domain BC4372 PF00905 Penicillin binding protein transpeptidase domain BC4374 PF03449 Transcription elongation factor, N-terminal BC4374 PF01272 Transcription elongation factor, GreA/GreB, C-term BC4375 PF00485 Phosphoribulokinase / Uridine kinase family BC4376 PF16325 Peptidase family U32 C-terminal domain BC4376 PF01136 Peptidase family U32 BC4377 PF01136 Peptidase family U32 BC4378 PF01596 O-methyltransferase BC4379 PF02618 YceG-like family BC4380 PF06949 Protein of unknown function (DUF1292) BC4381 PF03652 Holliday junction resolvase BC4382 PF06135 IreB regulatory phosphoprotein BC4383 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BC4383 PF01411 tRNA synthetases class II (A) BC4383 PF02272 DHHA1 domain BC4385 PF01594 AI-2E family transporter BC4389 PF14490 Helix-hairpin-helix containing domain BC4389 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BC4389 PF13538 UvrD-like helicase C-terminal domain BC4392 PF00266 Aminotransferase class-V BC4393 PF02082 Transcriptional regulator BC4394 PF16193 AAA C-terminal domain BC4394 PF12002 MgsA AAA+ ATPase C terminal BC4394 PF05496 Holliday junction DNA helicase RuvB P-loop domain BC4396 PF00899 ThiF family BC4397 PF01336 OB-fold nucleic acid binding domain BC4397 PF00152 tRNA synthetases class II (D, K and N) BC4397 PF02938 GAD domain BC4398 PF03129 Anticodon binding domain BC4398 PF13393 Histidyl-tRNA synthetase BC4400 PF02580 D-Tyr-tRNA(Tyr) deacylase BC4401 PF04607 Region found in RelA / SpoT proteins BC4401 PF02824 TGS domain BC4401 PF13291 ACT domain BC4402 PF00156 Phosphoribosyl transferase domain BC4403 PF02272 DHHA1 domain BC4403 PF17768 RecJ OB domain BC4403 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BC4403 PF01368 DHH family BC4404 PF16916 Dimerisation domain of Zinc Transporter BC4404 PF01545 Cation efflux family BC4405 PF02355 Protein export membrane protein BC4405 PF07549 SecD/SecF GG Motif BC4406 PF13797 Post-transcriptional regulator BC4407 PF01943 Polysaccharide biosynthesis protein BC4407 PF14667 Polysaccharide biosynthesis C-terminal domain BC4408 PF04239 Protein of unknown function (DUF421) BC4410 PF02699 Preprotein translocase subunit BC4411 PF01702 Queuine tRNA-ribosyltransferase BC4412 PF02547 Queuosine biosynthesis protein BC4413 PF11146 Protein of unknown function (DUF2905) BC4414 PF05496 Holliday junction DNA helicase RuvB P-loop domain BC4414 PF17864 RuvB AAA lid domain BC4414 PF05491 RuvB C-terminal winged helix domain BC4415 PF07499 RuvA, C-terminal domain BC4415 PF01330 RuvA N terminal domain BC4416 PF01497 Periplasmic binding protein BC4420 PF01476 LysM domain BC4421 PF02445 Quinolinate synthetase A protein BC4422 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BC4422 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BC4423 PF00890 FAD binding domain BC4423 PF02910 Fumarate reductase flavoprotein C-term BC4424 PF00266 Aminotransferase class-V BC4425 PF02829 3H domain BC4425 PF08279 HTH domain BC4426 PF03473 MOSC domain BC4426 PF03475 3-alpha domain BC4427 PF00800 Prephenate dehydratase BC4427 PF01842 ACT domain BC4430 PF02687 FtsX-like permease family BC4431 PF00005 ABC transporter BC4432 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC4433 PF00072 Response regulator receiver domain BC4433 PF00486 Transcriptional regulatory protein, C terminal BC4434 PF09269 Domain of unknown function (DUF1967) BC4434 PF01018 GTP1/OBG BC4434 PF01926 50S ribosome-binding GTPase BC4435 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BC4435 PF14682 Sporulation initiation phospho-transferase B, C-terminal BC4436 PF01016 Ribosomal L27 protein BC4437 PF04327 Cysteine protease Prp BC4438 PF00829 Ribosomal prokaryotic L21 protein BC4439 PF00575 S1 RNA binding domain BC4439 PF10150 Ribonuclease E/G family BC4440 PF02163 Peptidase family M50 BC4441 PF01551 Peptidase family M23 BC4442 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BC4443 PF03775 Septum formation inhibitor MinC, C-terminal domain BC4445 PF04085 rod shape-determining protein MreC BC4447 PF04002 RadC-like JAB domain BC4456 PF12008 Type I restriction and modification enzyme - subunit R C terminal BC4456 PF18766 SWI2/SNF2 ATPase BC4456 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BC4457 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BC4457 PF12008 Type I restriction and modification enzyme - subunit R C terminal BC4457 PF18766 SWI2/SNF2 ATPase BC4459 PF12161 HsdM N-terminal domain BC4459 PF02384 N-6 DNA Methylase BC4461 PF04002 RadC-like JAB domain BC4462 PF02545 Maf-like protein BC4464 PF02875 Mur ligase family, glutamate ligase domain BC4464 PF08245 Mur ligase middle domain BC4465 PF10458 Valyl tRNA synthetase tRNA binding arm BC4465 PF08264 Anticodon-binding domain of tRNA BC4465 PF00133 tRNA synthetases class I (I, L, M and V) BC4467 PF01476 LysM domain BC4468 PF00202 Aminotransferase class-III BC4469 PF00490 Delta-aminolevulinic acid dehydratase BC4470 PF02602 Uroporphyrinogen-III synthase HemD BC4471 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BC4471 PF03900 Porphobilinogen deaminase, C-terminal domain BC4472 PF01578 Cytochrome C assembly protein BC4473 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BC4473 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BC4473 PF01488 Shikimate / quinate 5-dehydrogenase BC4474 PF01047 MarR family BC4475 PF02566 OsmC-like protein BC4476 PF01926 50S ribosome-binding GTPase BC4477 PF05362 Lon protease (S16) C-terminal proteolytic domain BC4477 PF00004 ATPase family associated with various cellular activities (AAA) BC4477 PF02190 ATP-dependent protease La (LON) substrate-binding domain BC4478 PF05362 Lon protease (S16) C-terminal proteolytic domain BC4478 PF00004 ATPase family associated with various cellular activities (AAA) BC4479 PF06689 ClpX C4-type zinc finger BC4479 PF10431 C-terminal, D2-small domain, of ClpB protein BC4479 PF07724 AAA domain (Cdc48 subfamily) BC4480 PF05697 Bacterial trigger factor protein (TF) BC4480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BC4480 PF05698 Bacterial trigger factor protein (TF) C-terminus BC4483 PF11724 YvbH-like oligomerisation region BC4483 PF08000 Bacterial PH domain BC4487 PF13361 UvrD-like helicase C-terminal domain BC4487 PF00570 HRDC domain BC4492 PF12850 Calcineurin-like phosphoesterase superfamily domain BC4493 PF01725 Ham1 family BC4494 PF01138 3' exoribonuclease family, domain 1 BC4494 PF03725 3' exoribonuclease family, domain 2 BC4495 PF10646 Sporulation and spore germination BC4496 PF01177 Asp/Glu/Hydantoin racemase BC4497 PF07690 Major Facilitator Superfamily BC4499 PF00440 Bacterial regulatory proteins, tetR family BC4501 PF00196 Bacterial regulatory proteins, luxR family BC4502 PF00860 Permease family BC4503 PF07969 Amidohydrolase family BC4504 PF04024 PspC domain BC4505 PF01381 Helix-turn-helix BC4505 PF07883 Cupin domain BC4507 PF00230 Major intrinsic protein BC4508 PF02082 Transcriptional regulator BC4510 PF13732 Domain of unknown function (DUF4162) BC4510 PF00005 ABC transporter BC4511 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BC4512 PF13677 Membrane MotB of proton-channel complex MotA/MotB BC4512 PF00691 OmpA family BC4513 PF01618 MotA/TolQ/ExbB proton channel family BC4514 PF02557 D-alanyl-D-alanine carboxypeptidase BC4515 PF03061 Thioesterase superfamily BC4516 PF13183 4Fe-4S dicluster domain BC4516 PF13085 2Fe-2S iron-sulfur cluster binding domain BC4517 PF00890 FAD binding domain BC4517 PF02910 Fumarate reductase flavoprotein C-term BC4518 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BC4519 PF10702 Protein of unknown function (DUF2507) BC4520 PF02151 UvrB/uvrC motif BC4520 PF08459 UvrC Helix-hairpin-helix N-terminal BC4520 PF01541 GIY-YIG catalytic domain BC4521 PF00085 Thioredoxin BC4523 PF01012 Electron transfer flavoprotein domain BC4524 PF00378 Enoyl-CoA hydratase/isomerase BC4525 PF00440 Bacterial regulatory proteins, tetR family BC4525 PF08359 YsiA-like protein, C-terminal region BC4526 PF13193 AMP-binding enzyme C-terminal domain BC4526 PF00501 AMP-binding enzyme BC4528 PF01497 Periplasmic binding protein BC4531 PF05163 DinB family BC4537 PF00005 ABC transporter BC4538 PF00512 His Kinase A (phospho-acceptor) domain BC4538 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC4539 PF00486 Transcriptional regulatory protein, C terminal BC4539 PF00072 Response regulator receiver domain BC4540 PF09962 Uncharacterized conserved protein (DUF2196) BC4541 PF17785 PUA-like domain BC4541 PF10672 S-adenosylmethionine-dependent methyltransferase BC4542 PF03992 Antibiotic biosynthesis monooxygenase BC4543 PF04203 Sortase domain BC4544 PF00005 ABC transporter BC4545 PF01032 FecCD transport family BC4546 PF01497 Periplasmic binding protein BC4547 PF05031 Iron Transport-associated domain BC4549 PF05031 Iron Transport-associated domain BC4550 PF05525 Branched-chain amino acid transport protein BC4551 PF00849 RNA pseudouridylate synthase BC4551 PF01479 S4 domain BC4553 PF02811 PHP domain BC4553 PF14716 Helix-hairpin-helix domain BC4553 PF14791 DNA polymerase beta thumb BC4554 PF02674 Colicin V production protein BC4555 PF05164 Cell division protein ZapA BC4556 PF11858 Domain of unknown function (DUF3378) BC4556 PF01351 Ribonuclease HII BC4559 PF01336 OB-fold nucleic acid binding domain BC4559 PF00152 tRNA synthetases class II (D, K and N) BC4560 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BC4560 PF01588 Putative tRNA binding domain BC4560 PF03147 Ferredoxin-fold anticodon binding domain BC4560 PF03484 tRNA synthetase B5 domain BC4560 PF03483 B3/4 domain BC4561 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BC4561 PF01409 tRNA synthetases class II core domain (F) BC4562 PF08032 RNA 2'-O ribose methyltransferase substrate binding BC4562 PF00588 SpoU rRNA Methylase family BC4563 PF14098 Small, acid-soluble spore protein I BC4564 PF01966 HD domain BC4568 PF07690 Major Facilitator Superfamily BC4570 PF16859 Tetracyclin repressor-like, C-terminal domain BC4570 PF00440 Bacterial regulatory proteins, tetR family BC4571 PF05343 M42 glutamyl aminopeptidase BC4573 PF00453 Ribosomal protein L20 BC4574 PF01632 Ribosomal protein L35 BC4575 PF00707 Translation initiation factor IF-3, C-terminal domain BC4575 PF05198 Translation initiation factor IF-3, N-terminal domain BC4576 PF03129 Anticodon binding domain BC4576 PF02824 TGS domain BC4576 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BC4576 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BC4577 PF08812 YtxC-like family BC4578 PF13783 Domain of unknown function (DUF4177) BC4579 PF01695 IstB-like ATP binding protein BC4579 PF07319 Primosomal protein DnaI N-terminus BC4580 PF07261 Replication initiation and membrane attachment BC4581 PF03477 ATP cone domain BC4582 PF02675 S-adenosylmethionine decarboxylase BC4583 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BC4583 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BC4584 PF01121 Dephospho-CoA kinase BC4585 PF02659 Putative manganese efflux pump BC4586 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BC4586 PF06827 Zinc finger found in FPG and IleRS BC4586 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BC4587 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BC4587 PF00476 DNA polymerase family A BC4587 PF01367 5'-3' exonuclease, C-terminal SAM fold BC4588 PF16736 Single Cache-like BC4588 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC4588 PF00512 His Kinase A (phospho-acceptor) domain BC4588 PF00989 PAS fold BC4589 PF00486 Transcriptional regulatory protein, C terminal BC4589 PF00072 Response regulator receiver domain BC4592 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BC4592 PF00056 lactate/malate dehydrogenase, NAD binding domain BC4593 PF00180 Isocitrate/isopropylmalate dehydrogenase BC4594 PF00285 Citrate synthase, C-terminal domain BC4596 PF04284 Protein of unknown function (DUF441) BC4597 PF01594 AI-2E family transporter BC4598 PF04186 FxsA cytoplasmic membrane protein BC4599 PF02887 Pyruvate kinase, alpha/beta domain BC4599 PF00391 PEP-utilising enzyme, mobile domain BC4599 PF00224 Pyruvate kinase, barrel domain BC4600 PF00365 Phosphofructokinase BC4601 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BC4602 PF01039 Carboxyl transferase domain BC4602 PF17848 Acetyl-coA carboxylase zinc finger domain BC4603 PF00392 Bacterial regulatory proteins, gntR family BC4604 PF00390 Malic enzyme, N-terminal domain BC4604 PF03949 Malic enzyme, NAD binding domain BC4605 PF01336 OB-fold nucleic acid binding domain BC4605 PF14579 Helix-hairpin-helix motif BC4605 PF02811 PHP domain BC4605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BC4605 PF07733 Bacterial DNA polymerase III alpha NTPase domain BC4606 PF14034 Sporulation protein YtrH BC4608 PF01368 DHH family BC4608 PF02272 DHHA1 domain BC4609 PF14007 YtpI-like protein BC4611 PF07085 DRTGG domain BC4611 PF00392 Bacterial regulatory proteins, gntR family BC4611 PF00571 CBS domain BC4611 PF03061 Thioesterase superfamily BC4614 PF00557 Metallopeptidase family M24 BC4614 PF01321 Creatinase/Prolidase N-terminal domain BC4620 PF12746 GNAT acetyltransferase BC4621 PF07883 Cupin domain BC4623 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BC4623 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BC4625 PF00582 Universal stress protein family BC4629 PF00206 Lyase BC4629 PF14698 Argininosuccinate lyase C-terminal BC4630 PF00764 Arginosuccinate synthase BC4633 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC4633 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC4634 PF12787 EcsC protein family BC4637 PF00871 Acetokinase family BC4638 PF02384 N-6 DNA Methylase BC4639 PF08534 Redoxin BC4640 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BC4642 PF01513 ATP-NAD kinase BC4643 PF07969 Amidohydrolase family BC4645 PF13193 AMP-binding enzyme C-terminal domain BC4645 PF00501 AMP-binding enzyme BC4646 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC4647 PF02568 Thiamine biosynthesis protein (ThiI) BC4647 PF02926 THUMP domain BC4648 PF00266 Aminotransferase class-V BC4649 PF06160 Septation ring formation regulator, EzrA BC4650 PF03466 LysR substrate binding domain BC4650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC4651 PF00892 EamA-like transporter family BC4652 PF00440 Bacterial regulatory proteins, tetR family BC4653 PF13185 GAF domain BC4654 PF01053 Cys/Met metabolism PLP-dependent enzyme BC4655 PF01479 S4 domain BC4655 PF00163 Ribosomal protein S4/S9 N-terminal domain BC4657 PF01479 S4 domain BC4657 PF00579 tRNA synthetases class I (W and Y) BC4658 PF14602 Hexapeptide repeat of succinyl-transferase BC4658 PF12464 Maltose acetyltransferase BC4659 PF00501 AMP-binding enzyme BC4659 PF13193 AMP-binding enzyme C-terminal domain BC4660 PF00583 Acetyltransferase (GNAT) family BC4661 PF00571 CBS domain BC4662 PF00850 Histone deacetylase domain BC4665 PF00486 Transcriptional regulatory protein, C terminal BC4665 PF00072 Response regulator receiver domain BC4666 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC4666 PF00672 HAMP domain BC4666 PF00512 His Kinase A (phospho-acceptor) domain BC4666 PF13426 PAS domain BC4667 PF12796 Ankyrin repeats (3 copies) BC4668 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BC4669 PF01741 Large-conductance mechanosensitive channel, MscL BC4672 PF00356 Bacterial regulatory proteins, lacI family BC4674 PF00793 DAHP synthetase I family BC4674 PF01817 Chorismate mutase type II BC4675 PF07537 CamS sex pheromone cAM373 precursor BC4676 PF11009 Protein of unknown function (DUF2847) BC4678 PF02073 Thermophilic metalloprotease (M29) BC4683 PF13302 Acetyltransferase (GNAT) domain BC4684 PF08245 Mur ligase middle domain BC4684 PF02875 Mur ligase family, glutamate ligase domain BC4684 PF01225 Mur ligase family, catalytic domain BC4686 PF01580 FtsK/SpoIIIE family BC4686 PF09397 Ftsk gamma domain BC4686 PF17854 FtsK alpha domain BC4687 PF01520 N-acetylmuramoyl-L-alanine amidase BC4687 PF01476 LysM domain BC4689 PF14794 Domain of unknown function (DUF4479) BC4689 PF01588 Putative tRNA binding domain BC4690 PF07285 Protein of unknown function (DUF1444) BC4691 PF00085 Thioredoxin BC4692 PF01931 Protein of unknown function DUF84 BC4693 PF05343 M42 glutamyl aminopeptidase BC4695 PF00753 Metallo-beta-lactamase superfamily BC4696 PF02390 Putative methyltransferase BC4697 PF14165 YtzH-like protein BC4698 PF01636 Phosphotransferase enzyme family BC4701 PF02834 LigT like Phosphoesterase BC4702 PF01546 Peptidase family M20/M25/M40 BC4703 PF08220 DeoR-like helix-turn-helix domain BC4704 PF01479 S4 domain BC4704 PF00849 RNA pseudouridylate synthase BC4705 PF14667 Polysaccharide biosynthesis C-terminal domain BC4705 PF01943 Polysaccharide biosynthesis protein BC4707 PF07690 Major Facilitator Superfamily BC4708 PF01022 Bacterial regulatory protein, arsR family BC4709 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BC4712 PF10957 Sporulation protein Cse60 BC4714 PF02559 CarD-like/TRCF domain BC4716 PF06800 Sugar transport protein BC4719 PF02391 MoaE protein BC4720 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BC4721 PF03453 MoeA N-terminal region (domain I and II) BC4721 PF00994 Probable molybdopterin binding domain BC4721 PF03454 MoeA C-terminal region (domain IV) BC4722 PF01967 MoaC family BC4723 PF00899 ThiF family BC4724 PF06463 Molybdenum Cofactor Synthesis C BC4724 PF04055 Radical SAM superfamily BC4728 PF00581 Rhodanese-like domain BC4730 PF00561 alpha/beta hydrolase fold BC4731 PF03323 Bacillus/Clostridium GerA spore germination protein BC4732 PF03845 Spore germination protein BC4737 PF13603 Leucyl-tRNA synthetase, Domain 2 BC4737 PF08264 Anticodon-binding domain of tRNA BC4737 PF09334 tRNA synthetases class I (M) BC4737 PF00133 tRNA synthetases class I (I, L, M and V) BC4738 PF07690 Major Facilitator Superfamily BC4739 PF00999 Sodium/hydrogen exchanger family BC4740 PF02080 TrkA-C domain BC4741 PF00589 Phage integrase family BC4743 PF00005 ABC transporter BC4744 PF04235 Protein of unknown function (DUF418) BC4744 PF07786 Protein of unknown function (DUF1624) BC4745 PF10732 Protein of unknown function (DUF2524) BC4746 PF16199 Radical_SAM C-terminal domain BC4746 PF04055 Radical SAM superfamily BC4747 PF06962 Putative rRNA methylase BC4748 PF00005 ABC transporter BC4750 PF01177 Asp/Glu/Hydantoin racemase BC4752 PF10776 Protein of unknown function (DUF2600) BC4753 PF12146 Serine aminopeptidase, S33 BC4754 PF00132 Bacterial transferase hexapeptide (six repeats) BC4755 PF01569 PAP2 superfamily BC4756 PF00534 Glycosyl transferases group 1 BC4756 PF13439 Glycosyltransferase Family 4 BC4757 PF12804 MobA-like NTP transferase domain BC4758 PF00994 Probable molybdopterin binding domain BC4760 PF13302 Acetyltransferase (GNAT) domain BC4761 PF00438 S-adenosylmethionine synthetase, N-terminal domain BC4761 PF02773 S-adenosylmethionine synthetase, C-terminal domain BC4761 PF02772 S-adenosylmethionine synthetase, central domain BC4762 PF01293 Phosphoenolpyruvate carboxykinase BC4770 PF00989 PAS fold BC4770 PF00512 His Kinase A (phospho-acceptor) domain BC4770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC4770 PF13188 PAS domain BC4770 PF13426 PAS domain BC4771 PF02743 Cache domain BC4771 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC4771 PF00512 His Kinase A (phospho-acceptor) domain BC4774 PF08386 TAP-like protein BC4774 PF00561 alpha/beta hydrolase fold BC4775 PF00884 Sulfatase BC4779 PF00005 ABC transporter BC4780 PF00528 Binding-protein-dependent transport system inner membrane component BC4785 PF00293 NUDIX domain BC4789 PF02664 S-Ribosylhomocysteinase (LuxS) BC4790 PF01809 Putative membrane protein insertion efficiency factor BC4791 PF00484 Carbonic anhydrase BC4792 PF01654 Cytochrome bd terminal oxidase subunit I BC4793 PF02322 Cytochrome bd terminal oxidase subunit II BC4794 PF10676 Spore germination protein gerPA/gerPF BC4796 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC4796 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC4801 PF04012 PspA/IM30 family BC4803 PF00665 Integrase core domain BC4803 PF13333 Integrase core domain BC4803 PF13276 HTH-like domain BC4808 PF09515 Thiamine transporter protein (Thia_YuaJ) BC4809 PF00512 His Kinase A (phospho-acceptor) domain BC4809 PF00672 HAMP domain BC4809 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC4810 PF00072 Response regulator receiver domain BC4810 PF00486 Transcriptional regulatory protein, C terminal BC4815 PF00156 Phosphoribosyl transferase domain BC4816 PF00781 Diacylglycerol kinase catalytic domain BC4823 PF02687 FtsX-like permease family BC4828 PF09335 SNARE associated Golgi protein BC4829 PF00398 Ribosomal RNA adenine dimethylase BC4830 PF02687 FtsX-like permease family BC4831 PF00005 ABC transporter BC4832 PF12833 Helix-turn-helix domain BC4832 PF06445 GyrI-like small molecule binding domain BC4833 PF07853 Protein of unknown function (DUF1648) BC4833 PF13630 SdpI/YhfL protein family BC4834 PF01022 Bacterial regulatory protein, arsR family BC4835 PF00072 Response regulator receiver domain BC4835 PF00486 Transcriptional regulatory protein, C terminal BC4836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC4837 PF02687 FtsX-like permease family BC4838 PF02687 FtsX-like permease family BC4839 PF00005 ABC transporter BC4840 PF02687 FtsX-like permease family BC4841 PF02447 GntP family permease BC4842 PF00392 Bacterial regulatory proteins, gntR family BC4842 PF07702 UTRA domain BC4844 PF07071 KDGP aldolase BC4845 PF03841 L-seryl-tRNA selenium transferase BC4846 PF01979 Amidohydrolase family BC4847 PF02557 D-alanyl-D-alanine carboxypeptidase BC4848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC4848 PF00512 His Kinase A (phospho-acceptor) domain BC4849 PF00072 Response regulator receiver domain BC4849 PF00486 Transcriptional regulatory protein, C terminal BC4851 PF00501 AMP-binding enzyme BC4851 PF13193 AMP-binding enzyme C-terminal domain BC4853 PF00378 Enoyl-CoA hydratase/isomerase BC4854 PF00561 alpha/beta hydrolase fold BC4855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BC4855 PF16582 Middle domain of thiamine pyrophosphate BC4855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BC4856 PF00425 chorismate binding enzyme BC4857 PF01040 UbiA prenyltransferase family BC4858 PF01258 Prokaryotic dksA/traR C4-type zinc finger BC4859 PF00313 'Cold-shock' DNA-binding domain BC4863 PF00343 Carbohydrate phosphorylase BC4864 PF08323 Starch synthase catalytic domain BC4864 PF00534 Glycosyl transferases group 1 BC4866 PF00483 Nucleotidyl transferase BC4867 PF02806 Alpha amylase, C-terminal all-beta domain BC4867 PF00128 Alpha amylase, catalytic domain BC4867 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BC4869 PF13860 FlgD Ig-like domain BC4869 PF00082 Subtilase family BC4869 PF02225 PA domain BC4869 PF05922 Peptidase inhibitor I9 BC4870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BC4870 PF00056 lactate/malate dehydrogenase, NAD binding domain BC4889 PF05698 Bacterial trigger factor protein (TF) C-terminus BC4889 PF05697 Bacterial trigger factor protein (TF) BC4895 PF02308 MgtC family BC4897 PF08868 YugN-like family BC4898 PF00342 Phosphoglucose isomerase BC4899 PF04070 Domain of unknown function (DUF378) BC4900 PF00575 S1 RNA binding domain BC4901 PF00155 Aminotransferase class I and II BC4902 PF01037 Lrp/AsnC ligand binding domain BC4903 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BC4903 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BC4904 PF00561 alpha/beta hydrolase fold BC4904 PF08386 TAP-like protein BC4906 PF00155 Aminotransferase class I and II BC4909 PF08810 Kinase associated protein B BC4910 PF00929 Exonuclease BC4911 PF03600 Citrate transporter BC4915 PF03061 Thioesterase superfamily BC4917 PF02632 BioY family BC4918 PF00483 Nucleotidyl transferase BC4919 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BC4919 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BC4919 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BC4919 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BC4920 PF02457 DisA bacterial checkpoint controller nucleotide-binding BC4920 PF10372 Bacterial membrane-spanning protein N-terminus BC4921 PF02789 Cytosol aminopeptidase family, N-terminal domain BC4921 PF00883 Cytosol aminopeptidase family, catalytic domain BC4922 PF06725 3D domain BC4924 PF13344 Haloacid dehalogenase-like hydrolase BC4924 PF00293 NUDIX domain BC4925 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC4926 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC4928 PF06445 GyrI-like small molecule binding domain BC4931 PF04463 Protein of unknown function (DUF523) BC4933 PF01596 O-methyltransferase BC4935 PF01521 Iron-sulphur cluster biosynthesis BC4936 PF01678 Diaminopimelate epimerase BC4937 PF07293 Protein of unknown function (DUF1450) BC4938 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC4940 PF00005 ABC transporter BC4940 PF09383 NIL domain BC4941 PF03649 Uncharacterised protein family (UPF0014) BC4942 PF08274 PhnA Zinc-Ribbon BC4942 PF03831 PhnA domain BC4950 PF13427 Domain of unknown function (DUF4111) BC4950 PF01909 Nucleotidyltransferase domain BC4951 PF07315 Protein of unknown function (DUF1462) BC4952 PF01106 NifU-like domain BC4955 PF04608 Phosphatidylglycerophosphatase A BC4958 PF02525 Flavodoxin-like fold BC4959 PF13344 Haloacid dehalogenase-like hydrolase BC4961 PF01934 Protein of unknown function DUF86 BC4962 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BC4966 PF06265 Protein of unknown function (DUF1027) BC4967 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BC4968 PF13411 MerR HTH family regulatory protein BC4968 PF07739 TipAS antibiotic-recognition domain BC4969 PF10086 YhfC intramembrane metalloprotease BC4973 PF04055 Radical SAM superfamily BC4973 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BC4974 PF01551 Peptidase family M23 BC4975 PF09560 Sporulation protein YunB (Spo_YunB) BC4976 PF08827 Domain of unknown function (DUF1805) BC4977 PF02872 5'-nucleotidase, C-terminal domain BC4979 PF01458 Uncharacterized protein family (UPF0051) BC4980 PF01592 NifU-like N terminal domain BC4981 PF00266 Aminotransferase class-V BC4982 PF01458 Uncharacterized protein family (UPF0051) BC4983 PF00005 ABC transporter BC4984 PF03180 NLPA lipoprotein BC4985 PF03180 NLPA lipoprotein BC4986 PF00528 Binding-protein-dependent transport system inner membrane component BC4987 PF09383 NIL domain BC4987 PF00005 ABC transporter BC4989 PF00085 Thioredoxin BC4990 PF01751 Toprim domain BC4991 PF01597 Glycine cleavage H-protein BC4992 PF03960 ArsC family BC4996 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BC4996 PF00056 lactate/malate dehydrogenase, NAD binding domain BC5000 PF00440 Bacterial regulatory proteins, tetR family BC5000 PF13305 Tetracyclin repressor-like, C-terminal domain BC5001 PF00753 Metallo-beta-lactamase superfamily BC5002 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BC5002 PF02770 Acyl-CoA dehydrogenase, middle domain BC5002 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BC5003 PF00108 Thiolase, N-terminal domain BC5003 PF02803 Thiolase, C-terminal domain BC5004 PF00378 Enoyl-CoA hydratase/isomerase BC5004 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BC5004 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BC5005 PF07943 Penicillin-binding protein 5, C-terminal domain BC5005 PF00768 D-alanyl-D-alanine carboxypeptidase BC5006 PF01619 Proline dehydrogenase BC5007 PF10835 Protein of unknown function (DUF2573) BC5008 PF01910 Thiamine-binding protein BC5009 PF02743 Cache domain BC5009 PF00672 HAMP domain BC5009 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC5012 PF07690 Major Facilitator Superfamily BC5013 PF13520 Amino acid permease BC5016 PF02096 60Kd inner membrane protein BC5018 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC5018 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC5025 PF09335 SNARE associated Golgi protein BC5027 PF17969 L,D-transpeptidase C-terminal domain BC5027 PF03734 L,D-transpeptidase catalytic domain BC5028 PF00072 Response regulator receiver domain BC5028 PF00486 Transcriptional regulatory protein, C terminal BC5029 PF00512 His Kinase A (phospho-acceptor) domain BC5029 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC5029 PF16736 Single Cache-like BC5029 PF00989 PAS fold BC5031 PF08264 Anticodon-binding domain of tRNA BC5031 PF09334 tRNA synthetases class I (M) BC5034 PF02743 Cache domain BC5034 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC5034 PF00672 HAMP domain BC5035 PF01883 Iron-sulfur cluster assembly protein BC5036 PF01447 Thermolysin metallopeptidase, catalytic domain BC5036 PF02868 Thermolysin metallopeptidase, alpha-helical domain BC5036 PF03413 Peptidase propeptide and YPEB domain BC5036 PF07504 Fungalysin/Thermolysin Propeptide Motif BC5037 PF17954 Quercetinase C-terminal cupin domain BC5037 PF02678 Pirin BC5038 PF01047 MarR family BC5040 PF09335 SNARE associated Golgi protein BC5041 PF00999 Sodium/hydrogen exchanger family BC5042 PF02080 TrkA-C domain BC5043 PF01235 Sodium:alanine symporter family BC5044 PF00210 Ferritin-like domain BC5046 PF03641 Possible lysine decarboxylase BC5048 PF00210 Ferritin-like domain BC5049 PF07786 Protein of unknown function (DUF1624) BC5049 PF04235 Protein of unknown function (DUF418) BC5050 PF07662 Na+ dependent nucleoside transporter C-terminus BC5050 PF01773 Na+ dependent nucleoside transporter N-terminus BC5051 PF01235 Sodium:alanine symporter family BC5054 PF13460 NAD(P)H-binding BC5057 PF00248 Aldo/keto reductase family BC5058 PF07690 Major Facilitator Superfamily BC5059 PF01638 HxlR-like helix-turn-helix BC5060 PF07849 Protein of unknown function (DUF1641) BC5061 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC5062 PF00579 tRNA synthetases class I (W and Y) BC5062 PF01479 S4 domain BC5063 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BC5063 PF01565 FAD binding domain BC5065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC5065 PF17202 Single cache domain 3 BC5065 PF00672 HAMP domain BC5067 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BC5068 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BC5071 PF07690 Major Facilitator Superfamily BC5072 PF12848 ABC transporter BC5072 PF00005 ABC transporter BC5073 PF13302 Acetyltransferase (GNAT) domain BC5075 PF03946 Ribosomal protein L11, N-terminal domain BC5075 PF00298 Ribosomal protein L11, RNA binding domain BC5076 PF00106 short chain dehydrogenase BC5078 PF03946 Ribosomal protein L11, N-terminal domain BC5078 PF00298 Ribosomal protein L11, RNA binding domain BC5097 PF01037 Lrp/AsnC ligand binding domain BC5101 PF17440 Thiol-activated cytolysin beta sandwich domain BC5101 PF01289 Thiol-activated cytolysin BC5103 PF00005 ABC transporter BC5104 PF01032 FecCD transport family BC5105 PF01032 FecCD transport family BC5107 PF00486 Transcriptional regulatory protein, C terminal BC5107 PF00072 Response regulator receiver domain BC5115 PF13610 DDE domain BC5118 PF00005 ABC transporter BC5118 PF08402 TOBE domain BC5126 PF13610 DDE domain BC5127 PF13610 DDE domain BC5128 PF01668 SmpB protein BC5129 PF00773 RNB domain BC5129 PF00575 S1 RNA binding domain BC5129 PF17876 Cold shock domain BC5129 PF08206 Ribonuclease B OB domain BC5130 PF12146 Serine aminopeptidase, S33 BC5131 PF03840 Preprotein translocase SecG subunit BC5132 PF04172 LrgB-like family BC5133 PF03788 LrgA family BC5134 PF01156 Inosine-uridine preferring nucleoside hydrolase BC5135 PF03952 Enolase, N-terminal domain BC5135 PF00113 Enolase, C-terminal TIM barrel domain BC5136 PF01676 Metalloenzyme superfamily BC5136 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BC5140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BC5140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BC5141 PF04198 Putative sugar-binding domain BC5143 PF04963 Sigma-54 factor, core binding domain BC5143 PF00309 Sigma-54 factor, Activator interacting domain (AID) BC5143 PF04552 Sigma-54, DNA binding domain BC5147 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BC5148 PF07451 Stage V sporulation protein AD (SpoVAD) BC5149 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BC5151 PF04239 Protein of unknown function (DUF421) BC5152 PF00574 Clp protease BC5153 PF00381 PTS HPr component phosphorylation site BC5154 PF10298 WhiA N-terminal LAGLIDADG-like domain BC5154 PF02650 WhiA C-terminal HTH domain BC5154 PF14527 WhiA LAGLIDADG-like domain BC5155 PF01933 Uncharacterised protein family UPF0052 BC5156 PF03668 P-loop ATPase protein family BC5157 PF00293 NUDIX domain BC5159 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC5161 PF14602 Hexapeptide repeat of succinyl-transferase BC5162 PF13419 Haloacid dehalogenase-like hydrolase BC5163 PF01790 Prolipoprotein diacylglyceryl transferase BC5164 PF07475 HPr Serine kinase C-terminal domain BC5164 PF02603 HPr Serine kinase N terminus BC5165 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BC5167 PF00005 ABC transporter BC5167 PF17755 UvrA DNA-binding domain BC5167 PF17760 UvrA interaction domain BC5168 PF17757 UvrB interaction domain BC5168 PF04851 Type III restriction enzyme, res subunit BC5168 PF02151 UvrB/uvrC motif BC5168 PF12344 Ultra-violet resistance protein B BC5168 PF00271 Helicase conserved C-terminal domain BC5171 PF07739 TipAS antibiotic-recognition domain BC5171 PF13411 MerR HTH family regulatory protein BC5174 PF03601 Conserved hypothetical protein 698 BC5175 PF03466 LysR substrate binding domain BC5175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC5176 PF00376 MerR family regulatory protein BC5176 PF09278 MerR, DNA binding BC5177 PF03358 NADPH-dependent FMN reductase BC5178 PF00005 ABC transporter BC5178 PF12848 ABC transporter BC5180 PF13333 Integrase core domain BC5180 PF13276 HTH-like domain BC5180 PF00665 Integrase core domain BC5181 PF01906 Putative heavy-metal-binding BC5182 PF00005 ABC transporter BC5182 PF00664 ABC transporter transmembrane region BC5183 PF17820 PDZ domain BC5184 PF17820 PDZ domain BC5184 PF03572 Peptidase family S41 BC5184 PF01471 Putative peptidoglycan binding domain BC5185 PF18075 FtsX extracellular domain BC5185 PF02687 FtsX-like permease family BC5186 PF00005 ABC transporter BC5187 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BC5188 PF03462 PCRF domain BC5188 PF00472 RF-1 domain BC5189 PF01043 SecA preprotein cross-linking domain BC5189 PF02810 SEC-C motif BC5189 PF07516 SecA Wing and Scaffold domain BC5189 PF07517 SecA DEAD-like domain BC5190 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BC5190 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BC5191 PF00313 'Cold-shock' DNA-binding domain BC5193 PF00271 Helicase conserved C-terminal domain BC5193 PF04851 Type III restriction enzyme, res subunit BC5196 PF00877 NlpC/P60 family BC5196 PF01476 LysM domain BC5197 PF01638 HxlR-like helix-turn-helix BC5198 PF02645 Uncharacterised protein, DegV family COG1307 BC5199 PF09186 Domain of unknown function (DUF1949) BC5199 PF01205 Uncharacterized protein family UPF0029 BC5200 PF03816 Cell envelope-related transcriptional attenuator domain BC5201 PF02350 UDP-N-acetylglucosamine 2-epimerase BC5202 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BC5202 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BC5202 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BC5203 PF00953 Glycosyl transferase family 4 BC5204 PF01522 Polysaccharide deacetylase BC5205 PF03610 PTS system fructose IIA component BC5205 PF00874 PRD domain BC5205 PF00158 Sigma-54 interaction domain BC5207 PF02417 Chromate transporter BC5208 PF04794 YdjC-like protein BC5209 PF02056 Family 4 glycosyl hydrolase BC5209 PF11975 Family 4 glycosyl hydrolase C-terminal domain BC5210 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BC5211 PF02378 Phosphotransferase system, EIIC BC5214 PF02675 S-adenosylmethionine decarboxylase BC5215 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BC5216 PF02378 Phosphotransferase system, EIIC BC5217 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BC5218 PF00375 Sodium:dicarboxylate symporter family BC5222 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC5222 PF03466 LysR substrate binding domain BC5224 PF01654 Cytochrome bd terminal oxidase subunit I BC5225 PF02322 Cytochrome bd terminal oxidase subunit II BC5226 PF02040 Arsenical pump membrane protein BC5227 PF01964 Radical SAM ThiC family BC5227 PF13667 ThiC-associated domain BC5228 PF02652 L-lactate permease BC5230 PF09988 Uncharacterized metal-binding protein (DUF2227) BC5232 PF00884 Sulfatase BC5233 PF01063 Amino-transferase class IV BC5234 PF01476 LysM domain BC5234 PF00877 NlpC/P60 family BC5235 PF07662 Na+ dependent nucleoside transporter C-terminus BC5235 PF01773 Na+ dependent nucleoside transporter N-terminus BC5238 PF02028 BCCT, betaine/carnitine/choline family transporter BC5239 PF06725 3D domain BC5239 PF01476 LysM domain BC5244 PF04434 SWIM zinc finger BC5245 PF12419 SNF2 Helicase protein BC5245 PF00176 SNF2 family N-terminal domain BC5245 PF00271 Helicase conserved C-terminal domain BC5251 PF04542 Sigma-70 region 2 BC5251 PF04545 Sigma-70, region 4 BC5252 PF04893 Yip1 domain BC5253 PF02687 FtsX-like permease family BC5253 PF12704 MacB-like periplasmic core domain BC5254 PF00005 ABC transporter BC5258 PF07690 Major Facilitator Superfamily BC5261 PF00989 PAS fold BC5261 PF16736 Single Cache-like BC5261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC5261 PF00512 His Kinase A (phospho-acceptor) domain BC5262 PF00486 Transcriptional regulatory protein, C terminal BC5262 PF00072 Response regulator receiver domain BC5263 PF16363 GDP-mannose 4,6 dehydratase BC5265 PF03816 Cell envelope-related transcriptional attenuator domain BC5267 PF01501 Glycosyl transferase family 8 BC5267 PF00535 Glycosyl transferase family 2 BC5269 PF13439 Glycosyltransferase Family 4 BC5269 PF00534 Glycosyl transferases group 1 BC5270 PF02397 Bacterial sugar transferase BC5271 PF01370 NAD dependent epimerase/dehydratase family BC5272 PF01820 D-ala D-ala ligase N-terminus BC5272 PF07478 D-ala D-ala ligase C-terminus BC5273 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BC5274 PF02719 Polysaccharide biosynthesis protein BC5275 PF00483 Nucleotidyl transferase BC5277 PF13614 AAA domain BC5278 PF13807 G-rich domain on putative tyrosine kinase BC5278 PF02706 Chain length determinant protein BC5279 PF13614 AAA domain BC5280 PF07977 FabA-like domain BC5282 PF12116 Stage III sporulation protein D BC5283 PF01551 Peptidase family M23 BC5285 PF00005 ABC transporter BC5286 PF00072 Response regulator receiver domain BC5286 PF04397 LytTr DNA-binding domain BC5287 PF08486 Stage II sporulation protein BC5288 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BC5290 PF06612 Protein of unknown function (DUF1146) BC5291 PF00361 Proton-conducting membrane transporter BC5292 PF00361 Proton-conducting membrane transporter BC5293 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BC5293 PF00361 Proton-conducting membrane transporter BC5293 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BC5294 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BC5295 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BC5297 PF00146 NADH dehydrogenase BC5298 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BC5299 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BC5300 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BC5301 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BC5302 PF00563 EAL domain BC5302 PF03707 Bacterial signalling protein N terminal repeat BC5302 PF00990 Diguanylate cyclase, GGDEF domain BC5305 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BC5305 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BC5306 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BC5306 PF02874 ATP synthase alpha/beta family, beta-barrel domain BC5307 PF00231 ATP synthase BC5308 PF00306 ATP synthase alpha/beta chain, C terminal domain BC5308 PF02874 ATP synthase alpha/beta family, beta-barrel domain BC5308 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BC5309 PF00213 ATP synthase delta (OSCP) subunit BC5310 PF00430 ATP synthase B/B' CF(0) BC5311 PF00137 ATP synthase subunit C BC5312 PF00119 ATP synthase A chain BC5313 PF03899 ATP synthase I chain BC5316 PF00464 Serine hydroxymethyltransferase BC5317 PF04260 Protein of unknown function (DUF436) BC5318 PF02502 Ribose/Galactose Isomerase BC5319 PF01451 Low molecular weight phosphotyrosine protein phosphatase BC5320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BC5321 PF07681 DoxX BC5322 PF01613 Flavin reductase like domain BC5324 PF02659 Putative manganese efflux pump BC5325 PF01300 Telomere recombination BC5325 PF03481 Putative GTP-binding controlling metal-binding BC5327 PF09551 Stage II sporulation protein R (spore_II_R) BC5328 PF17827 PrmC N-terminal domain BC5328 PF13847 Methyltransferase domain BC5329 PF00472 RF-1 domain BC5329 PF03462 PCRF domain BC5330 PF00265 Thymidine kinase BC5331 PF01197 Ribosomal protein L31 BC5332 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BC5332 PF07498 Rho termination factor, N-terminal domain BC5332 PF07497 Rho termination factor, RNA-binding domain BC5333 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BC5334 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BC5335 PF01116 Fructose-bisphosphate aldolase class-II BC5336 PF00072 Response regulator receiver domain BC5337 PF10740 Domain of unknown function (DUF2529) BC5338 PF00117 Glutamine amidotransferase class-I BC5338 PF06418 CTP synthase N-terminus BC5339 PF05066 HB1, ASXL, restriction endonuclease HTH domain BC5341 PF02770 Acyl-CoA dehydrogenase, middle domain BC5341 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BC5341 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BC5342 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BC5342 PF02770 Acyl-CoA dehydrogenase, middle domain BC5342 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BC5343 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BC5343 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BC5344 PF00108 Thiolase, N-terminal domain BC5344 PF02803 Thiolase, C-terminal domain BC5345 PF02754 Cysteine-rich domain BC5345 PF13183 4Fe-4S dicluster domain BC5346 PF13091 PLD-like domain BC5347 PF03851 UV-endonuclease UvdE BC5351 PF07504 Fungalysin/Thermolysin Propeptide Motif BC5351 PF03413 Peptidase propeptide and YPEB domain BC5351 PF01447 Thermolysin metallopeptidase, catalytic domain BC5351 PF02868 Thermolysin metallopeptidase, alpha-helical domain BC5352 PF00196 Bacterial regulatory proteins, luxR family BC5352 PF00072 Response regulator receiver domain BC5353 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC5353 PF07730 Histidine kinase BC5355 PF00005 ABC transporter BC5356 PF00557 Metallopeptidase family M24 BC5359 PF02225 PA domain BC5359 PF04389 Peptidase family M28 BC5363 PF08281 Sigma-70, region 4 BC5363 PF04542 Sigma-70 region 2 BC5364 PF03485 Arginyl tRNA synthetase N terminal domain BC5364 PF05746 DALR anticodon binding domain BC5364 PF00750 tRNA synthetases class I (R) BC5365 PF09148 Domain of unknown function (DUF1934) BC5366 PF17676 LD-carboxypeptidase C-terminal domain BC5366 PF02016 LD-carboxypeptidase N-terminal domain BC5370 PF00491 Arginase family BC5371 PF17284 Spermidine synthase tetramerisation domain BC5372 PF07690 Major Facilitator Superfamily BC5373 PF13411 MerR HTH family regulatory protein BC5374 PF03009 Glycerophosphoryl diester phosphodiesterase family BC5375 PF00905 Penicillin binding protein transpeptidase domain BC5375 PF00912 Transglycosylase BC5376 PF08741 YwhD family BC5377 PF02163 Peptidase family M50 BC5378 PF01361 Tautomerase enzyme BC5379 PF01966 HD domain BC5380 PF01497 Periplasmic binding protein BC5381 PF00005 ABC transporter BC5382 PF01032 FecCD transport family BC5383 PF01032 FecCD transport family BC5384 PF07293 Protein of unknown function (DUF1450) BC5386 PF03099 Biotin/lipoate A/B protein ligase family BC5387 PF01515 Phosphate acetyl/butaryl transferase BC5388 PF06778 Chlorite dismutase BC5389 PF00768 D-alanyl-D-alanine carboxypeptidase BC5389 PF07943 Penicillin-binding protein 5, C-terminal domain BC5390 PF07486 Cell Wall Hydrolase BC5391 PF09671 Spore coat protein (Spore_GerQ) BC5392 PF04241 Protein of unknown function (DUF423) BC5394 PF07885 Ion channel BC5394 PF02254 TrkA-N domain BC5397 PF12823 Domain of unknown function (DUF3817) BC5398 PF03167 Uracil DNA glycosylase superfamily BC5399 PF12679 ABC-2 family transporter protein BC5400 PF00005 ABC transporter BC5401 PF13472 GDSL-like Lipase/Acylhydrolase family BC5402 PF00356 Bacterial regulatory proteins, lacI family BC5402 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BC5404 PF00742 Homoserine dehydrogenase BC5404 PF01842 ACT domain BC5404 PF03447 Homoserine dehydrogenase, NAD binding domain BC5405 PF04204 Homoserine O-succinyltransferase BC5406 PF01053 Cys/Met metabolism PLP-dependent enzyme BC5408 PF13419 Haloacid dehalogenase-like hydrolase BC5409 PF00027 Cyclic nucleotide-binding domain BC5410 PF02525 Flavodoxin-like fold BC5411 PF00196 Bacterial regulatory proteins, luxR family BC5411 PF00072 Response regulator receiver domain BC5412 PF07730 Histidine kinase BC5412 PF13185 GAF domain BC5413 PF08543 Phosphomethylpyrimidine kinase BC5414 PF00990 Diguanylate cyclase, GGDEF domain BC5414 PF07694 5TMR of 5TMR-LYT BC5415 PF04328 Selenoprotein, putative BC5416 PF13722 5TM C-terminal transporter carbon starvation CstA BC5416 PF02554 Carbon starvation protein CstA BC5417 PF04397 LytTr DNA-binding domain BC5417 PF00072 Response regulator receiver domain BC5418 PF07690 Major Facilitator Superfamily BC5419 PF03808 Glycosyl transferase WecB/TagA/CpsF family BC5420 PF13439 Glycosyltransferase Family 4 BC5420 PF00534 Glycosyl transferases group 1 BC5423 PF03458 UPF0126 domain BC5424 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC5426 PF03061 Thioesterase superfamily BC5427 PF00535 Glycosyl transferase family 2 BC5429 PF00535 Glycosyl transferase family 2 BC5432 PF00535 Glycosyl transferase family 2 BC5433 PF00005 ABC transporter BC5433 PF12848 ABC transporter BC5434 PF00440 Bacterial regulatory proteins, tetR family BC5435 PF00873 AcrB/AcrD/AcrF family BC5436 PF01625 Peptide methionine sulfoxide reductase BC5436 PF01641 SelR domain BC5437 PF01594 AI-2E family transporter BC5438 PF04172 LrgB-like family BC5439 PF03788 LrgA family BC5440 PF04397 LytTr DNA-binding domain BC5440 PF00072 Response regulator receiver domain BC5441 PF07694 5TMR of 5TMR-LYT BC5441 PF06580 Histidine kinase BC5441 PF13492 GAF domain BC5441 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC5442 PF07690 Major Facilitator Superfamily BC5443 PF02028 BCCT, betaine/carnitine/choline family transporter BC5444 PF02898 Nitric oxide synthase, oxygenase domain BC5445 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BC5445 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BC5447 PF02293 AmiS/UreI family transporter BC5448 PF16363 GDP-mannose 4,6 dehydratase BC5449 PF03006 Haemolysin-III related BC5451 PF00270 DEAD/DEAH box helicase BC5451 PF00271 Helicase conserved C-terminal domain BC5451 PF03880 DbpA RNA binding domain BC5452 PF00478 IMP dehydrogenase / GMP reductase domain BC5453 PF01432 Peptidase family M3 BC5453 PF08439 Oligopeptidase F BC5455 PF00989 PAS fold BC5455 PF13426 PAS domain BC5455 PF00512 His Kinase A (phospho-acceptor) domain BC5455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC5455 PF13188 PAS domain BC5456 PF02590 Predicted SPOUT methyltransferase BC5458 PF13180 PDZ domain BC5460 PF09648 YycH protein BC5462 PF00672 HAMP domain BC5462 PF13426 PAS domain BC5462 PF00512 His Kinase A (phospho-acceptor) domain BC5462 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC5463 PF00072 Response regulator receiver domain BC5463 PF00486 Transcriptional regulatory protein, C terminal BC5468 PF00709 Adenylosuccinate synthetase BC5471 PF01281 Ribosomal protein L9, N-terminal domain BC5471 PF03948 Ribosomal protein L9, C-terminal domain BC5472 PF01368 DHH family BC5472 PF02272 DHHA1 domain BC5473 PF09991 Predicted membrane protein (DUF2232) BC5474 PF01084 Ribosomal protein S18 BC5475 PF00436 Single-strand binding protein family BC5476 PF01250 Ribosomal protein S6 BC5477 PF06071 Protein of unknown function (DUF933) BC5477 PF01926 50S ribosome-binding GTPase BC5478 PF06107 Bacterial protein of unknown function (DUF951) BC5479 PF00924 Mechanosensitive ion channel BC5480 PF06866 Protein of unknown function (DUF1256) BC5481 PF17762 HTH domain found in ParB protein BC5481 PF02195 ParB-like nuclease domain BC5482 PF13614 AAA domain BC5483 PF02195 ParB-like nuclease domain BC5483 PF17762 HTH domain found in ParB protein BC5484 PF02527 rRNA small subunit methyltransferase G BC5485 PF01134 Glucose inhibited division protein A BC5485 PF13932 GidA associated domain BC5486 PF10396 GTP-binding protein TrmE N-terminus BC5486 PF12631 MnmE helical domain BC5486 PF01926 50S ribosome-binding GTPase BC5487 PF14804 Jag N-terminus BC5487 PF01424 R3H domain BC5488 PF02096 60Kd inner membrane protein BC5489 PF00825 Ribonuclease P BC5490 PF00468 Ribosomal protein L34 BCp0007 PF00986 DNA gyrase B subunit, carboxyl terminus BCp0007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCp0007 PF01751 Toprim domain BCp0007 PF00204 DNA gyrase B