locus-tag class description JM955_RS00005 PF00308 Bacterial dnaA protein JM955_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JM955_RS00005 PF11638 DnaA N-terminal domain JM955_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JM955_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JM955_RS00010 PF02767 DNA polymerase III beta subunit, central domain JM955_RS00020 PF02463 RecF/RecN/SMC N terminal domain JM955_RS00025 PF01751 Toprim domain JM955_RS00025 PF00204 DNA gyrase B JM955_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus JM955_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller JM955_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A JM955_RS00060 PF14175 YaaC-like Protein JM955_RS00065 PF00478 IMP dehydrogenase / GMP reductase domain JM955_RS00065 PF00571 CBS domain JM955_RS00070 PF00768 D-alanyl-D-alanine carboxypeptidase JM955_RS00070 PF07943 Penicillin-binding protein 5, C-terminal domain JM955_RS00075 PF01680 SOR/SNZ family JM955_RS00080 PF01174 SNO glutamine amidotransferase family JM955_RS00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JM955_RS00085 PF02403 Seryl-tRNA synthetase N-terminal domain JM955_RS00100 PF01712 Deoxynucleoside kinase JM955_RS00105 PF01712 Deoxynucleoside kinase JM955_RS00110 PF00857 Isochorismatase family JM955_RS00115 PF14437 MafB19-like deaminase JM955_RS00125 PF12169 DNA polymerase III subunits gamma and tau domain III JM955_RS00130 PF02575 YbaB/EbfC DNA-binding family JM955_RS00135 PF02132 RecR protein JM955_RS00135 PF13662 Toprim domain JM955_RS00140 PF10704 Protein of unknown function (DUF2508) JM955_RS00145 PF07441 SigmaK-factor processing regulatory protein BofA JM955_RS00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JM955_RS00180 PF01276 Orn/Lys/Arg decarboxylase, major domain JM955_RS00185 PF02223 Thymidylate kinase JM955_RS00190 PF09115 DNA polymerase III, delta subunit, C terminal JM955_RS00195 PF04468 PSP1 C-terminal conserved region JM955_RS00200 PF06156 Initiation control protein YabA JM955_RS00205 PF05175 Methyltransferase small domain JM955_RS00210 PF01541 GIY-YIG catalytic domain JM955_RS00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JM955_RS00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JM955_RS00220 PF18277 AbrB C-terminal domain JM955_RS00225 PF08264 Anticodon-binding domain of tRNA JM955_RS00225 PF09334 tRNA synthetases class I (M) JM955_RS00225 PF01588 Putative tRNA binding domain JM955_RS00230 PF01026 TatD related DNase JM955_RS00235 PF13331 Domain of unknown function (DUF4093) JM955_RS00235 PF13662 Toprim domain JM955_RS00240 PF00398 Ribosomal RNA adenine dimethylase JM955_RS00245 PF05582 YabG peptidase U57 JM955_RS00250 PF06257 Biofilm formation stimulator VEG JM955_RS00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type JM955_RS00260 PF00288 GHMP kinases N terminal domain JM955_RS00260 PF08544 GHMP kinases C terminal JM955_RS00265 PF09182 Bacterial purine repressor, N-terminal JM955_RS00265 PF00156 Phosphoribosyl transferase domain JM955_RS00270 PF01042 Endoribonuclease L-PSP JM955_RS00275 PF04026 SpoVG JM955_RS00280 PF00483 Nucleotidyl transferase JM955_RS00280 PF00132 Bacterial transferase hexapeptide (six repeats) JM955_RS00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JM955_RS00285 PF14572 Phosphoribosyl synthetase-associated domain JM955_RS00290 PF01195 Peptidyl-tRNA hydrolase JM955_RS00300 PF00270 DEAD/DEAH box helicase JM955_RS00300 PF00271 Helicase conserved C-terminal domain JM955_RS00300 PF03461 TRCF domain JM955_RS00300 PF02559 CarD-like/TRCF domain JM955_RS00300 PF17757 UvrB interaction domain JM955_RS00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JM955_RS00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor JM955_RS00310 PF01943 Polysaccharide biosynthesis protein JM955_RS00310 PF14667 Polysaccharide biosynthesis C-terminal domain JM955_RS00315 PF03819 MazG nucleotide pyrophosphohydrolase domain JM955_RS00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JM955_RS00320 PF01479 S4 domain JM955_RS00325 PF07873 YabP family JM955_RS00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) JM955_RS00340 PF00575 S1 RNA binding domain JM955_RS00355 PF07228 Stage II sporulation protein E (SpoIIE) JM955_RS00360 PF09179 TilS substrate binding domain JM955_RS00360 PF01171 PP-loop family JM955_RS00360 PF11734 TilS substrate C-terminal domain JM955_RS00365 PF00156 Phosphoribosyl transferase domain JM955_RS00370 PF06480 FtsH Extracellular JM955_RS00370 PF01434 Peptidase family M41 JM955_RS00370 PF17862 AAA+ lid domain JM955_RS00370 PF00004 ATPase family associated with various cellular activities (AAA) JM955_RS00375 PF03309 Type III pantothenate kinase JM955_RS00380 PF01430 Hsp33 protein JM955_RS00385 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS00390 PF04715 Anthranilate synthase component I, N terminal region JM955_RS00390 PF00425 chorismate binding enzyme JM955_RS00395 PF00117 Glutamine amidotransferase class-I JM955_RS00400 PF01063 Amino-transferase class IV JM955_RS00405 PF00809 Pterin binding enzyme JM955_RS00410 PF02152 Dihydroneopterin aldolase JM955_RS00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JM955_RS00420 PF01381 Helix-turn-helix JM955_RS00425 PF01207 Dihydrouridine synthase (Dus) JM955_RS00430 PF01336 OB-fold nucleic acid binding domain JM955_RS00430 PF00152 tRNA synthetases class II (D, K and N) JM955_RS00510 PF17727 CtsR C-terminal dimerization domain JM955_RS00510 PF05848 CtsR N-terminal HTH domain JM955_RS00515 PF02151 UvrB/uvrC motif JM955_RS00520 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JM955_RS00525 PF07724 AAA domain (Cdc48 subfamily) JM955_RS00525 PF17871 AAA lid domain JM955_RS00525 PF02861 Clp amino terminal domain, pathogenicity island component JM955_RS00525 PF10431 C-terminal, D2-small domain, of ClpB protein JM955_RS00525 PF00004 ATPase family associated with various cellular activities (AAA) JM955_RS00530 PF18073 Rubredoxin metal binding domain JM955_RS00535 PF02457 DisA bacterial checkpoint controller nucleotide-binding JM955_RS00535 PF10635 DisA bacterial checkpoint controller linker region JM955_RS00545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JM955_RS00550 PF02542 YgbB family JM955_RS00555 PF00749 tRNA synthetases class I (E and Q), catalytic domain JM955_RS00560 PF00132 Bacterial transferase hexapeptide (six repeats) JM955_RS00560 PF06426 Serine acetyltransferase, N-terminal JM955_RS00565 PF01406 tRNA synthetases class I (C) catalytic domain JM955_RS00565 PF09190 DALR domain JM955_RS00570 PF00636 Ribonuclease III domain JM955_RS00575 PF00588 SpoU rRNA Methylase family JM955_RS00575 PF08032 RNA 2'-O ribose methyltransferase substrate binding JM955_RS00580 PF05991 YacP-like NYN domain JM955_RS00585 PF04542 Sigma-70 region 2 JM955_RS00585 PF08281 Sigma-70, region 4 JM955_RS00590 PF00471 Ribosomal protein L33 JM955_RS00595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JM955_RS00600 PF00467 KOW motif JM955_RS00600 PF02357 Transcription termination factor nusG JM955_RS00605 PF00298 Ribosomal protein L11, RNA binding domain JM955_RS00605 PF03946 Ribosomal protein L11, N-terminal domain JM955_RS00610 PF00687 Ribosomal protein L1p/L10e family JM955_RS00615 PF00466 Ribosomal protein L10 JM955_RS00620 PF16320 Ribosomal protein L7/L12 dimerisation domain JM955_RS00620 PF00542 Ribosomal protein L7/L12 C-terminal domain JM955_RS00625 PF05175 Methyltransferase small domain JM955_RS00630 PF04563 RNA polymerase beta subunit JM955_RS00630 PF04565 RNA polymerase Rpb2, domain 3 JM955_RS00630 PF04560 RNA polymerase Rpb2, domain 7 JM955_RS00630 PF10385 RNA polymerase beta subunit external 1 domain JM955_RS00630 PF00562 RNA polymerase Rpb2, domain 6 JM955_RS00630 PF04561 RNA polymerase Rpb2, domain 2 JM955_RS00635 PF05000 RNA polymerase Rpb1, domain 4 JM955_RS00635 PF04983 RNA polymerase Rpb1, domain 3 JM955_RS00635 PF00623 RNA polymerase Rpb1, domain 2 JM955_RS00635 PF04997 RNA polymerase Rpb1, domain 1 JM955_RS00635 PF04998 RNA polymerase Rpb1, domain 5 JM955_RS00640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JM955_RS00645 PF00164 Ribosomal protein S12/S23 JM955_RS00650 PF00177 Ribosomal protein S7p/S5e JM955_RS00655 PF03144 Elongation factor Tu domain 2 JM955_RS00655 PF00009 Elongation factor Tu GTP binding domain JM955_RS00655 PF03764 Elongation factor G, domain IV JM955_RS00655 PF14492 Elongation Factor G, domain II JM955_RS00655 PF00679 Elongation factor G C-terminus JM955_RS00660 PF00009 Elongation factor Tu GTP binding domain JM955_RS00660 PF03143 Elongation factor Tu C-terminal domain JM955_RS00660 PF03144 Elongation factor Tu domain 2 JM955_RS00665 PF00338 Ribosomal protein S10p/S20e JM955_RS00670 PF00297 Ribosomal protein L3 JM955_RS00675 PF00573 Ribosomal protein L4/L1 family JM955_RS00680 PF00276 Ribosomal protein L23 JM955_RS00685 PF03947 Ribosomal Proteins L2, C-terminal domain JM955_RS00685 PF00181 Ribosomal Proteins L2, RNA binding domain JM955_RS00690 PF00203 Ribosomal protein S19 JM955_RS00695 PF00237 Ribosomal protein L22p/L17e JM955_RS00700 PF07650 KH domain JM955_RS00700 PF00189 Ribosomal protein S3, C-terminal domain JM955_RS00705 PF00252 Ribosomal protein L16p/L10e JM955_RS00710 PF00831 Ribosomal L29 protein JM955_RS00715 PF00366 Ribosomal protein S17 JM955_RS00720 PF00238 Ribosomal protein L14p/L23e JM955_RS00725 PF00467 KOW motif JM955_RS00725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JM955_RS00730 PF00673 ribosomal L5P family C-terminus JM955_RS00730 PF00281 Ribosomal protein L5 JM955_RS00735 PF00253 Ribosomal protein S14p/S29e JM955_RS00740 PF00410 Ribosomal protein S8 JM955_RS00745 PF00347 Ribosomal protein L6 JM955_RS00750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JM955_RS00755 PF03719 Ribosomal protein S5, C-terminal domain JM955_RS00755 PF00333 Ribosomal protein S5, N-terminal domain JM955_RS00760 PF00327 Ribosomal protein L30p/L7e JM955_RS00765 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JM955_RS00770 PF00344 SecY translocase JM955_RS00775 PF05191 Adenylate kinase, active site lid JM955_RS00780 PF00557 Metallopeptidase family M24 JM955_RS00785 PF01176 Translation initiation factor 1A / IF-1 JM955_RS00790 PF00444 Ribosomal protein L36 JM955_RS00795 PF00416 Ribosomal protein S13/S18 JM955_RS00800 PF00411 Ribosomal protein S11 JM955_RS00805 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JM955_RS00805 PF01000 RNA polymerase Rpb3/RpoA insert domain JM955_RS00805 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JM955_RS00810 PF01196 Ribosomal protein L17 JM955_RS00815 PF00005 ABC transporter JM955_RS00820 PF00005 ABC transporter JM955_RS00825 PF02361 Cobalt transport protein JM955_RS00830 PF01416 tRNA pseudouridine synthase JM955_RS00835 PF00572 Ribosomal protein L13 JM955_RS00840 PF00380 Ribosomal protein S9/S16 JM955_RS00850 PF01520 N-acetylmuramoyl-L-alanine amidase JM955_RS00855 PF10609 NUBPL iron-transfer P-loop NTPase JM955_RS00860 PF17898 Spore germination GerD central core domain JM955_RS00865 PF14089 KinB-signalling pathway activation in sporulation JM955_RS00870 PF01522 Polysaccharide deacetylase JM955_RS00940 PF02595 Glycerate kinase family JM955_RS00945 PF00491 Arginase family JM955_RS00950 PF02457 DisA bacterial checkpoint controller nucleotide-binding JM955_RS00955 PF07949 YbbR-like protein JM955_RS00960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JM955_RS00960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JM955_RS00960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JM955_RS00960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JM955_RS00965 PF01380 SIS domain JM955_RS00970 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JM955_RS00970 PF00326 Prolyl oligopeptidase family JM955_RS00995 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS01000 PF00005 ABC transporter JM955_RS01000 PF09383 NIL domain JM955_RS01005 PF03180 NLPA lipoprotein JM955_RS01010 PF00107 Zinc-binding dehydrogenase JM955_RS01010 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS01020 PF01565 FAD binding domain JM955_RS01025 PF07690 Major Facilitator Superfamily JM955_RS01035 PF07690 Major Facilitator Superfamily JM955_RS01055 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS01060 PF12911 N-terminal TM domain of oligopeptide transport permease C JM955_RS01065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JM955_RS01065 PF00005 ABC transporter JM955_RS01070 PF00005 ABC transporter JM955_RS01070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JM955_RS01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS01090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS01095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS01100 PF00248 Aldo/keto reductase family JM955_RS01105 PF14748 Pyrroline-5-carboxylate reductase dimerisation JM955_RS01105 PF03807 NADP oxidoreductase coenzyme F420-dependent JM955_RS01110 PF04973 Nicotinamide mononucleotide transporter JM955_RS01115 PF06800 Sugar transport protein JM955_RS01120 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS01130 PF12727 PBP superfamily domain JM955_RS01130 PF12728 Helix-turn-helix domain JM955_RS01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS01140 PF03466 LysR substrate binding domain JM955_RS01145 PF00892 EamA-like transporter family JM955_RS01150 PF14142 YrzO-like protein JM955_RS01160 PF01553 Acyltransferase JM955_RS01170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JM955_RS01170 PF00356 Bacterial regulatory proteins, lacI family JM955_RS01180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JM955_RS01180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS01195 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) JM955_RS01215 PF16326 ABC transporter C-terminal domain JM955_RS01215 PF12848 ABC transporter JM955_RS01215 PF00005 ABC transporter JM955_RS01225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS01230 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS01235 PF12911 N-terminal TM domain of oligopeptide transport permease C JM955_RS01235 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JM955_RS01240 PF00005 ABC transporter JM955_RS01245 PF00005 ABC transporter JM955_RS01245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JM955_RS01280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS01285 PF01557 Fumarylacetoacetate (FAA) hydrolase family JM955_RS01295 PF13520 Amino acid permease JM955_RS01300 PF07690 Major Facilitator Superfamily JM955_RS01305 PF07478 D-ala D-ala ligase C-terminus JM955_RS01305 PF01820 D-ala D-ala ligase N-terminus JM955_RS01310 PF08245 Mur ligase middle domain JM955_RS01310 PF02875 Mur ligase family, glutamate ligase domain JM955_RS01310 PF01225 Mur ligase family, catalytic domain JM955_RS01315 PF00271 Helicase conserved C-terminal domain JM955_RS01315 PF00270 DEAD/DEAH box helicase JM955_RS01320 PF03851 UV-endonuclease UvdE JM955_RS01325 PF01694 Rhomboid family JM955_RS01330 PF01648 4'-phosphopantetheinyl transferase superfamily JM955_RS01340 PF01168 Alanine racemase, N-terminal domain JM955_RS01340 PF00842 Alanine racemase, C-terminal domain JM955_RS01345 PF01402 Ribbon-helix-helix protein, copG family JM955_RS01350 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JM955_RS01355 PF17674 HHH domain JM955_RS01355 PF16921 Tex protein YqgF-like domain JM955_RS01355 PF09371 Tex-like protein N-terminal domain JM955_RS01355 PF00575 S1 RNA binding domain JM955_RS01365 PF10263 SprT-like family JM955_RS01365 PF17283 SprT-like zinc ribbon domain JM955_RS01455 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JM955_RS01460 PF00814 Glycoprotease family JM955_RS01465 PF00583 Acetyltransferase (GNAT) family JM955_RS01470 PF00814 Glycoprotease family JM955_RS01475 PF16326 ABC transporter C-terminal domain JM955_RS01475 PF12848 ABC transporter JM955_RS01475 PF00005 ABC transporter JM955_RS01480 PF02629 CoA binding domain JM955_RS01480 PF06971 Putative DNA-binding protein N-terminus JM955_RS01490 PF02517 CPBP intramembrane metalloprotease JM955_RS01495 PF00166 Chaperonin 10 Kd subunit JM955_RS01500 PF00118 TCP-1/cpn60 chaperonin family JM955_RS01505 PF04740 LXG domain of WXG superfamily JM955_RS01505 PF14436 Bacterial EndoU nuclease JM955_RS01515 PF02540 NAD synthase JM955_RS01515 PF00117 Glutamine amidotransferase class-I JM955_RS01515 PF00958 GMP synthase C terminal domain JM955_RS01520 PF00860 Permease family JM955_RS01525 PF00486 Transcriptional regulatory protein, C terminal JM955_RS01525 PF00072 Response regulator receiver domain JM955_RS01530 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS01530 PF16736 Single Cache-like JM955_RS01530 PF00989 PAS fold JM955_RS01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS01555 PF01323 DSBA-like thioredoxin domain JM955_RS01575 PF00155 Aminotransferase class I and II JM955_RS01575 PF00392 Bacterial regulatory proteins, gntR family JM955_RS01580 PF01619 Proline dehydrogenase JM955_RS01610 PF02673 Bacitracin resistance protein BacA JM955_RS01620 PF00005 ABC transporter JM955_RS01625 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS01630 PF00486 Transcriptional regulatory protein, C terminal JM955_RS01630 PF00072 Response regulator receiver domain JM955_RS01650 PF00892 EamA-like transporter family JM955_RS01680 PF00731 AIR carboxylase JM955_RS01685 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JM955_RS01685 PF02222 ATP-grasp domain JM955_RS01690 PF10397 Adenylosuccinate lyase C-terminus JM955_RS01690 PF00206 Lyase JM955_RS01695 PF01259 SAICAR synthetase JM955_RS01700 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JM955_RS01710 PF02769 AIR synthase related protein, C-terminal domain JM955_RS01710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JM955_RS01710 PF00586 AIR synthase related protein, N-terminal domain JM955_RS01715 PF00156 Phosphoribosyl transferase domain JM955_RS01720 PF00586 AIR synthase related protein, N-terminal domain JM955_RS01720 PF02769 AIR synthase related protein, C-terminal domain JM955_RS01725 PF00551 Formyl transferase JM955_RS01730 PF02142 MGS-like domain JM955_RS01730 PF01808 AICARFT/IMPCHase bienzyme JM955_RS01735 PF02844 Phosphoribosylglycinamide synthetase, N domain JM955_RS01735 PF02843 Phosphoribosylglycinamide synthetase, C domain JM955_RS01735 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JM955_RS01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS01745 PF03466 LysR substrate binding domain JM955_RS01765 PF01884 PcrB family JM955_RS01770 PF13361 UvrD-like helicase C-terminal domain JM955_RS01770 PF00580 UvrD/REP helicase N-terminal domain JM955_RS01775 PF01653 NAD-dependent DNA ligase adenylation domain JM955_RS01775 PF00533 BRCA1 C Terminus (BRCT) domain JM955_RS01775 PF03120 NAD-dependent DNA ligase OB-fold domain JM955_RS01775 PF12826 Helix-hairpin-helix motif JM955_RS01775 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JM955_RS01780 PF07537 CamS sex pheromone cAM373 precursor JM955_RS01785 PF01925 Sulfite exporter TauE/SafE JM955_RS01790 PF00171 Aldehyde dehydrogenase family JM955_RS01795 PF00857 Isochorismatase family JM955_RS01800 PF00005 ABC transporter JM955_RS01800 PF09383 NIL domain JM955_RS01805 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS01810 PF03180 NLPA lipoprotein JM955_RS01825 PF17886 HSP20-like domain found in ArsA JM955_RS01825 PF02374 Anion-transporting ATPase JM955_RS01830 PF01047 MarR family JM955_RS01835 PF05360 yiaA/B two helix domain JM955_RS01840 PF02686 Glu-tRNAGln amidotransferase C subunit JM955_RS01845 PF01425 Amidase JM955_RS01850 PF02637 GatB domain JM955_RS01850 PF02934 GatB/GatE catalytic domain JM955_RS01855 PF00781 Diacylglycerol kinase catalytic domain JM955_RS01860 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS01865 PF00202 Aminotransferase class-III JM955_RS01870 PF00158 Sigma-54 interaction domain JM955_RS01875 PF00171 Aldehyde dehydrogenase family JM955_RS01880 PF00893 Small Multidrug Resistance protein JM955_RS01885 PF02073 Thermophilic metalloprotease (M29) JM955_RS01905 PF01773 Na+ dependent nucleoside transporter N-terminus JM955_RS01905 PF07670 Nucleoside recognition JM955_RS01905 PF07662 Na+ dependent nucleoside transporter C-terminus JM955_RS01910 PF01938 TRAM domain JM955_RS01910 PF05958 tRNA (Uracil-5-)-methyltransferase JM955_RS01910 PF13847 Methyltransferase domain JM955_RS01915 PF01207 Dihydrouridine synthase (Dus) JM955_RS01920 PF07308 Protein of unknown function (DUF1456) JM955_RS01935 PF13378 Enolase C-terminal domain-like JM955_RS01935 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JM955_RS01945 PF03553 Na+/H+ antiporter family JM955_RS01950 PF01546 Peptidase family M20/M25/M40 JM955_RS01950 PF07687 Peptidase dimerisation domain JM955_RS01965 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS01965 PF13192 Thioredoxin domain JM955_RS01970 PF00578 AhpC/TSA family JM955_RS01975 PF01636 Phosphotransferase enzyme family JM955_RS01980 PF01008 Initiation factor 2 subunit family JM955_RS01985 PF00596 Class II Aldolase and Adducin N-terminal domain JM955_RS01990 PF01032 FecCD transport family JM955_RS01995 PF01032 FecCD transport family JM955_RS02000 PF01497 Periplasmic binding protein JM955_RS02005 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS02015 PF12728 Helix-turn-helix domain JM955_RS02040 PF13188 PAS domain JM955_RS02040 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS02040 PF00989 PAS fold JM955_RS02040 PF13426 PAS domain JM955_RS02040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS02060 PF10127 RNA repair pathway DNA polymerase beta family JM955_RS02065 PF07690 Major Facilitator Superfamily JM955_RS02070 PF01266 FAD dependent oxidoreductase JM955_RS02070 PF00355 Rieske [2Fe-2S] domain JM955_RS02080 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS02085 PF00497 Bacterial extracellular solute-binding proteins, family 3 JM955_RS02090 PF00005 ABC transporter JM955_RS02095 PF12729 Four helix bundle sensory module for signal transduction JM955_RS02095 PF00672 HAMP domain JM955_RS02095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS02100 PF01316 Arginine repressor, DNA binding domain JM955_RS02100 PF02863 Arginine repressor, C-terminal domain JM955_RS02110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JM955_RS02110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JM955_RS02115 PF13520 Amino acid permease JM955_RS02120 PF00696 Amino acid kinase family JM955_RS02125 PF13545 Crp-like helix-turn-helix domain JM955_RS02125 PF00027 Cyclic nucleotide-binding domain JM955_RS02135 PF01565 FAD binding domain JM955_RS02135 PF08031 Berberine and berberine like JM955_RS02140 PF00128 Alpha amylase, catalytic domain JM955_RS02140 PF16657 Maltogenic Amylase, C-terminal domain JM955_RS02145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JM955_RS02145 PF02378 Phosphotransferase system, EIIC JM955_RS02145 PF00367 phosphotransferase system, EIIB JM955_RS02150 PF03372 Endonuclease/Exonuclease/phosphatase family JM955_RS02155 PF01061 ABC-2 type transporter JM955_RS02160 PF01131 DNA topoisomerase JM955_RS02160 PF01751 Toprim domain JM955_RS02165 PF02110 Hydroxyethylthiazole kinase family JM955_RS02170 PF02581 Thiamine monophosphate synthase JM955_RS02175 PF03605 Anaerobic c4-dicarboxylate membrane transporter JM955_RS02180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS02180 PF00672 HAMP domain JM955_RS02185 PF00550 Phosphopantetheine attachment site JM955_RS02185 PF07993 Male sterility protein JM955_RS02185 PF00501 AMP-binding enzyme JM955_RS02185 PF00668 Condensation domain JM955_RS02185 PF13193 AMP-binding enzyme C-terminal domain JM955_RS02190 PF01910 Thiamine-binding protein JM955_RS02195 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS02200 PF09084 NMT1/THI5 like JM955_RS02205 PF00005 ABC transporter JM955_RS02210 PF00005 ABC transporter JM955_RS02210 PF12848 ABC transporter JM955_RS02215 PF00041 Fibronectin type III domain JM955_RS02215 PF00704 Glycosyl hydrolases family 18 JM955_RS02240 PF08360 QacR-like protein, C-terminal region JM955_RS02240 PF00440 Bacterial regulatory proteins, tetR family JM955_RS02255 PF11700 Vacuole effluxer Atg22 like JM955_RS02270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JM955_RS02270 PF09180 Prolyl-tRNA synthetase, C-terminal JM955_RS02270 PF03129 Anticodon binding domain JM955_RS02285 PF00480 ROK family JM955_RS02290 PF02342 TerD domain JM955_RS02295 PF02342 TerD domain JM955_RS02300 PF02342 TerD domain JM955_RS02305 PF03741 Integral membrane protein TerC family JM955_RS02310 PF14266 Putative component of 'biosynthetic module' JM955_RS02315 PF05816 Toxic anion resistance protein (TelA) JM955_RS02320 PF00690 Cation transporter/ATPase, N-terminus JM955_RS02320 PF00689 Cation transporting ATPase, C-terminus JM955_RS02325 PF06569 Protein of unknown function (DUF1128) JM955_RS02330 PF01451 Low molecular weight phosphotyrosine protein phosphatase JM955_RS02340 PF03631 Virulence factor BrkB JM955_RS02350 PF00892 EamA-like transporter family JM955_RS02360 PF10502 Signal peptidase, peptidase S26 JM955_RS02370 PF09335 SNARE associated Golgi protein JM955_RS02385 PF16242 Pyridoxamine 5'-phosphate oxidase like JM955_RS02390 PF01699 Sodium/calcium exchanger protein JM955_RS02395 PF14167 YfkD-like protein JM955_RS02400 PF04055 Radical SAM superfamily JM955_RS02400 PF08756 YfkB-like domain JM955_RS02410 PF05681 Fumarate hydratase (Fumerase) JM955_RS02410 PF05683 Fumarase C-terminus JM955_RS02415 PF01522 Polysaccharide deacetylase JM955_RS02420 PF00730 HhH-GPD superfamily base excision DNA repair protein JM955_RS02425 PF01938 TRAM domain JM955_RS02425 PF05958 tRNA (Uracil-5-)-methyltransferase JM955_RS02430 PF01416 tRNA pseudouridine synthase JM955_RS02440 PF00158 Sigma-54 interaction domain JM955_RS02440 PF02954 Bacterial regulatory protein, Fis family JM955_RS02440 PF13426 PAS domain JM955_RS02450 PF00324 Amino acid permease JM955_RS02455 PF07687 Peptidase dimerisation domain JM955_RS02455 PF01546 Peptidase family M20/M25/M40 JM955_RS02475 PF04960 Glutaminase JM955_RS02480 PF00367 phosphotransferase system, EIIB JM955_RS02480 PF02378 Phosphotransferase system, EIIC JM955_RS02485 PF00144 Beta-lactamase JM955_RS02500 PF00535 Glycosyl transferase family 2 JM955_RS02505 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JM955_RS02505 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JM955_RS02505 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JM955_RS02510 PF00551 Formyl transferase JM955_RS02510 PF01370 NAD dependent epimerase/dehydratase family JM955_RS02510 PF02911 Formyl transferase, C-terminal domain JM955_RS02515 PF00535 Glycosyl transferase family 2 JM955_RS02525 PF02901 Pyruvate formate lyase-like JM955_RS02525 PF01228 Glycine radical JM955_RS02530 PF04055 Radical SAM superfamily JM955_RS02535 PF04101 Glycosyltransferase family 28 C-terminal domain JM955_RS02535 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JM955_RS02550 PF01979 Amidohydrolase family JM955_RS02555 PF01370 NAD dependent epimerase/dehydratase family JM955_RS02555 PF08338 Domain of unknown function (DUF1731) JM955_RS02560 PF02631 RecX family JM955_RS02575 PF08176 Small acid-soluble spore protein K family JM955_RS02580 PF14043 WVELL protein JM955_RS02585 PF04307 LexA-binding, inner membrane-associated putative hydrolase JM955_RS02590 PF14815 NUDIX domain JM955_RS02590 PF00730 HhH-GPD superfamily base excision DNA repair protein JM955_RS02600 PF04259 Small, acid-soluble spore protein, gamma-type JM955_RS02605 PF14182 YgaB-like protein JM955_RS02610 PF04167 Protein of unknown function (DUF402) JM955_RS02615 PF00664 ABC transporter transmembrane region JM955_RS02615 PF00005 ABC transporter JM955_RS02620 PF06081 Aromatic acid exporter family member 1 JM955_RS02625 PF04898 Glutamate synthase central domain JM955_RS02625 PF01645 Conserved region in glutamate synthase JM955_RS02625 PF01493 GXGXG motif JM955_RS02625 PF00310 Glutamine amidotransferases class-II JM955_RS02630 PF00202 Aminotransferase class-III JM955_RS02635 PF00005 ABC transporter JM955_RS02650 PF07885 Ion channel JM955_RS02655 PF00578 AhpC/TSA family JM955_RS02660 PF01475 Ferric uptake regulator family JM955_RS02670 PF11023 Zinc-ribbon containing domain JM955_RS02770 PF01709 Transcriptional regulator JM955_RS02775 PF00293 NUDIX domain JM955_RS02775 PF13344 Haloacid dehalogenase-like hydrolase JM955_RS02780 PF00905 Penicillin binding protein transpeptidase domain JM955_RS02780 PF00912 Transglycosylase JM955_RS02785 PF13462 Thioredoxin JM955_RS02795 PF08331 Domain of unknown function (DUF1730) JM955_RS02800 PF12671 Putative amidase domain JM955_RS02805 PF00588 SpoU rRNA Methylase family JM955_RS02810 PF00498 FHA domain JM955_RS02810 PF00990 Diguanylate cyclase, GGDEF domain JM955_RS02810 PF00563 EAL domain JM955_RS02815 PF06798 PrkA serine protein kinase C-terminal domain JM955_RS02815 PF08298 PrkA AAA domain JM955_RS02820 PF04285 Protein of unknown function (DUF444) JM955_RS02830 PF01648 4'-phosphopantetheinyl transferase superfamily JM955_RS02835 PF00975 Thioesterase domain JM955_RS02840 PF00501 AMP-binding enzyme JM955_RS02840 PF13193 AMP-binding enzyme C-terminal domain JM955_RS02840 PF00550 Phosphopantetheine attachment site JM955_RS02840 PF00668 Condensation domain JM955_RS02845 PF00975 Thioesterase domain JM955_RS02845 PF00550 Phosphopantetheine attachment site JM955_RS02845 PF00668 Condensation domain JM955_RS02845 PF13193 AMP-binding enzyme C-terminal domain JM955_RS02845 PF00501 AMP-binding enzyme JM955_RS02850 PF00698 Acyl transferase domain JM955_RS02855 PF08659 KR domain JM955_RS02855 PF00109 Beta-ketoacyl synthase, N-terminal domain JM955_RS02855 PF16197 Ketoacyl-synthetase C-terminal extension JM955_RS02855 PF02801 Beta-ketoacyl synthase, C-terminal domain JM955_RS02855 PF00550 Phosphopantetheine attachment site JM955_RS02855 PF08242 Methyltransferase domain JM955_RS02855 PF14765 Polyketide synthase dehydratase JM955_RS02860 PF14765 Polyketide synthase dehydratase JM955_RS02860 PF00550 Phosphopantetheine attachment site JM955_RS02860 PF08659 KR domain JM955_RS02860 PF16197 Ketoacyl-synthetase C-terminal extension JM955_RS02860 PF00109 Beta-ketoacyl synthase, N-terminal domain JM955_RS02860 PF08242 Methyltransferase domain JM955_RS02860 PF02801 Beta-ketoacyl synthase, C-terminal domain JM955_RS02925 PF02028 BCCT, betaine/carnitine/choline family transporter JM955_RS02930 PF08453 Peptidase family M9 N-terminal JM955_RS02930 PF18496 Collagenase G catalytic helper subdomain JM955_RS02930 PF01752 Collagenase JM955_RS02940 PF15975 Flotillin JM955_RS02940 PF01145 SPFH domain / Band 7 family JM955_RS02945 PF00672 HAMP domain JM955_RS02945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS02945 PF02743 Cache domain JM955_RS02950 PF00989 PAS fold JM955_RS02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS02950 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JM955_RS02950 PF17203 Single cache domain 3 JM955_RS02955 PF12431 Transcriptional regulator JM955_RS02955 PF00072 Response regulator receiver domain JM955_RS02960 PF03600 Citrate transporter JM955_RS02985 PF04309 Glycerol-3-phosphate responsive antiterminator JM955_RS02990 PF17912 MalK OB fold domain JM955_RS02990 PF00005 ABC transporter JM955_RS02995 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS03000 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS03005 PF13416 Bacterial extracellular solute-binding protein JM955_RS03010 PF00149 Calcineurin-like phosphoesterase JM955_RS03015 PF00072 Response regulator receiver domain JM955_RS03015 PF00486 Transcriptional regulatory protein, C terminal JM955_RS03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS03020 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS03030 PF13529 Peptidase_C39 like family JM955_RS03035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS03035 PF00672 HAMP domain JM955_RS03035 PF02743 Cache domain JM955_RS03040 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JM955_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS03040 PF00989 PAS fold JM955_RS03040 PF17203 Single cache domain 3 JM955_RS03045 PF00072 Response regulator receiver domain JM955_RS03050 PF03390 2-hydroxycarboxylate transporter family JM955_RS03055 PF00390 Malic enzyme, N-terminal domain JM955_RS03055 PF03949 Malic enzyme, NAD binding domain JM955_RS03065 PF00892 EamA-like transporter family JM955_RS03070 PF00155 Aminotransferase class I and II JM955_RS03070 PF00392 Bacterial regulatory proteins, gntR family JM955_RS03080 PF00989 PAS fold JM955_RS03080 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS03080 PF18698 Histidine kinase sensor domain JM955_RS03080 PF00672 HAMP domain JM955_RS03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS03085 PF00072 Response regulator receiver domain JM955_RS03085 PF00486 Transcriptional regulatory protein, C terminal JM955_RS03090 PF00583 Acetyltransferase (GNAT) family JM955_RS03090 PF13508 Acetyltransferase (GNAT) domain JM955_RS03095 PF02634 FdhD/NarQ family JM955_RS03100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JM955_RS03100 PF01568 Molydopterin dinucleotide binding domain JM955_RS03100 PF00384 Molybdopterin oxidoreductase JM955_RS03100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JM955_RS03100 PF00037 4Fe-4S binding domain JM955_RS03105 PF07849 Protein of unknown function (DUF1641) JM955_RS03115 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JM955_RS03115 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JM955_RS03120 PF13520 Amino acid permease JM955_RS03130 PF01022 Bacterial regulatory protein, arsR family JM955_RS03135 PF00403 Heavy-metal-associated domain JM955_RS03140 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JM955_RS03140 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JM955_RS03140 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JM955_RS03155 PF02868 Thermolysin metallopeptidase, alpha-helical domain JM955_RS03155 PF01447 Thermolysin metallopeptidase, catalytic domain JM955_RS03155 PF03413 Peptidase propeptide and YPEB domain JM955_RS03155 PF07504 Fungalysin/Thermolysin Propeptide Motif JM955_RS03175 PF04294 VanW like protein JM955_RS03180 PF03816 Cell envelope-related transcriptional attenuator domain JM955_RS03185 PF01773 Na+ dependent nucleoside transporter N-terminus JM955_RS03185 PF07662 Na+ dependent nucleoside transporter C-terminus JM955_RS03190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS03195 PF03471 Transporter associated domain JM955_RS03195 PF00571 CBS domain JM955_RS03195 PF01595 Cyclin M transmembrane N-terminal domain JM955_RS03200 PF00206 Lyase JM955_RS03200 PF10415 Fumarase C C-terminus JM955_RS03205 PF02652 L-lactate permease JM955_RS03210 PF01022 Bacterial regulatory protein, arsR family JM955_RS03215 PF08141 Small acid-soluble spore protein H family JM955_RS03220 PF00854 POT family JM955_RS03225 PF01497 Periplasmic binding protein JM955_RS03230 PF01032 FecCD transport family JM955_RS03235 PF01032 FecCD transport family JM955_RS03240 PF00005 ABC transporter JM955_RS03250 PF00155 Aminotransferase class I and II JM955_RS03255 PF01370 NAD dependent epimerase/dehydratase family JM955_RS03260 PF00156 Phosphoribosyl transferase domain JM955_RS03265 PF13344 Haloacid dehalogenase-like hydrolase JM955_RS03265 PF00293 NUDIX domain JM955_RS03270 PF00092 von Willebrand factor type A domain JM955_RS03275 PF07728 AAA domain (dynein-related subfamily) JM955_RS03280 PF13091 PLD-like domain JM955_RS03280 PF13396 Phospholipase_D-nuclease N-terminal JM955_RS03290 PF00563 EAL domain JM955_RS03290 PF03707 Bacterial signalling protein N terminal repeat JM955_RS03290 PF00990 Diguanylate cyclase, GGDEF domain JM955_RS03295 PF13520 Amino acid permease JM955_RS03300 PF07702 UTRA domain JM955_RS03300 PF00392 Bacterial regulatory proteins, gntR family JM955_RS03305 PF02378 Phosphotransferase system, EIIC JM955_RS03305 PF00367 phosphotransferase system, EIIB JM955_RS03310 PF00128 Alpha amylase, catalytic domain JM955_RS03310 PF16657 Maltogenic Amylase, C-terminal domain JM955_RS03325 PF03323 Bacillus/Clostridium GerA spore germination protein JM955_RS03335 PF01636 Phosphotransferase enzyme family JM955_RS03340 PF01235 Sodium:alanine symporter family JM955_RS03345 PF00005 ABC transporter JM955_RS03350 PF00497 Bacterial extracellular solute-binding proteins, family 3 JM955_RS03355 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS03360 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS03365 PF00324 Amino acid permease JM955_RS03380 PF08281 Sigma-70, region 4 JM955_RS03380 PF04542 Sigma-70 region 2 JM955_RS03390 PF08279 HTH domain JM955_RS03390 PF13280 WYL domain JM955_RS03395 PF01872 RibD C-terminal domain JM955_RS03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS03400 PF00672 HAMP domain JM955_RS03400 PF00989 PAS fold JM955_RS03400 PF18698 Histidine kinase sensor domain JM955_RS03400 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS03405 PF00072 Response regulator receiver domain JM955_RS03405 PF00486 Transcriptional regulatory protein, C terminal JM955_RS03425 PF00916 Sulfate permease family JM955_RS03425 PF01740 STAS domain JM955_RS03430 PF00582 Universal stress protein family JM955_RS03440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS03445 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS03450 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS03455 PF00005 ABC transporter JM955_RS03455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JM955_RS03460 PF00005 ABC transporter JM955_RS03460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JM955_RS03465 PF07690 Major Facilitator Superfamily JM955_RS03470 PF01047 MarR family JM955_RS03475 PF07690 Major Facilitator Superfamily JM955_RS03480 PF00356 Bacterial regulatory proteins, lacI family JM955_RS03485 PF00294 pfkB family carbohydrate kinase JM955_RS03490 PF05025 RbsD / FucU transport protein family JM955_RS03495 PF00005 ABC transporter JM955_RS03500 PF02653 Branched-chain amino acid transport system / permease component JM955_RS03505 PF13407 Periplasmic binding protein domain JM955_RS03510 PF00923 Transaldolase/Fructose-6-phosphate aldolase JM955_RS03515 PF05547 Immune inhibitor A peptidase M6 JM955_RS03530 PF00107 Zinc-binding dehydrogenase JM955_RS03530 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS03540 PF00882 Zinc dependent phospholipase C JM955_RS03545 PF03372 Endonuclease/Exonuclease/phosphatase family JM955_RS03575 PF02673 Bacitracin resistance protein BacA JM955_RS03580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS03580 PF00672 HAMP domain JM955_RS03580 PF02743 Cache domain JM955_RS03585 PF01476 LysM domain JM955_RS03585 PF06725 3D domain JM955_RS03590 PF01381 Helix-turn-helix JM955_RS03600 PF04203 Sortase domain JM955_RS03610 PF00854 POT family JM955_RS03615 PF05525 Branched-chain amino acid transport protein JM955_RS03630 PF00324 Amino acid permease JM955_RS03635 PF00860 Permease family JM955_RS03650 PF13673 Acetyltransferase (GNAT) domain JM955_RS03660 PF02254 TrkA-N domain JM955_RS03660 PF00999 Sodium/hydrogen exchanger family JM955_RS03660 PF02080 TrkA-C domain JM955_RS03670 PF00510 Cytochrome c oxidase subunit III JM955_RS03675 PF00115 Cytochrome C and Quinol oxidase polypeptide I JM955_RS03680 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JM955_RS03685 PF00324 Amino acid permease JM955_RS03690 PF13529 Peptidase_C39 like family JM955_RS03695 PF07687 Peptidase dimerisation domain JM955_RS03695 PF01546 Peptidase family M20/M25/M40 JM955_RS03700 PF11755 Protein of unknown function (DUF3311) JM955_RS03705 PF00474 Sodium:solute symporter family JM955_RS03710 PF03323 Bacillus/Clostridium GerA spore germination protein JM955_RS03715 PF03845 Spore germination protein JM955_RS03720 PF05504 Spore germination B3/ GerAC like, C-terminal JM955_RS03730 PF02421 Ferrous iron transport protein B JM955_RS03730 PF07664 Ferrous iron transport protein B C terminus JM955_RS03730 PF07670 Nucleoside recognition JM955_RS03730 PF17910 FeoB cytosolic helical domain JM955_RS03735 PF17910 FeoB cytosolic helical domain JM955_RS03735 PF07664 Ferrous iron transport protein B C terminus JM955_RS03735 PF07670 Nucleoside recognition JM955_RS03735 PF02421 Ferrous iron transport protein B JM955_RS03740 PF17910 FeoB cytosolic helical domain JM955_RS03740 PF02421 Ferrous iron transport protein B JM955_RS03740 PF07664 Ferrous iron transport protein B C terminus JM955_RS03740 PF07670 Nucleoside recognition JM955_RS03740 PF04023 FeoA domain JM955_RS03745 PF12849 PBP superfamily domain JM955_RS03750 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS03755 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS03765 PF00873 AcrB/AcrD/AcrF family JM955_RS03885 PF00571 CBS domain JM955_RS03900 PF00246 Zinc carboxypeptidase JM955_RS03900 PF08239 Bacterial SH3 domain JM955_RS03905 PF03070 TENA/THI-4/PQQC family JM955_RS03910 PF00005 ABC transporter JM955_RS03915 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS03920 PF09084 NMT1/THI5 like JM955_RS03925 PF02581 Thiamine monophosphate synthase JM955_RS03930 PF01266 FAD dependent oxidoreductase JM955_RS03935 PF02597 ThiS family JM955_RS03940 PF05690 Thiazole biosynthesis protein ThiG JM955_RS03945 PF00899 ThiF family JM955_RS03950 PF08543 Phosphomethylpyrimidine kinase JM955_RS03975 PF03814 Potassium-transporting ATPase A subunit JM955_RS03985 PF02669 K+-transporting ATPase, c chain JM955_RS03990 PF02702 Osmosensitive K+ channel His kinase sensor domain JM955_RS03995 PF07690 Major Facilitator Superfamily JM955_RS04000 PF01047 MarR family JM955_RS04020 PF00860 Permease family JM955_RS04030 PF03734 L,D-transpeptidase catalytic domain JM955_RS04030 PF17969 L,D-transpeptidase C-terminal domain JM955_RS04045 PF00085 Thioredoxin JM955_RS04050 PF02600 Disulfide bond formation protein DsbB JM955_RS04055 PF14148 YhdB-like protein JM955_RS04065 PF03845 Spore germination protein JM955_RS04075 PF03323 Bacillus/Clostridium GerA spore germination protein JM955_RS04085 PF00881 Nitroreductase family JM955_RS04090 PF04293 SpoVR like protein JM955_RS04100 PF09339 IclR helix-turn-helix domain JM955_RS04100 PF01614 Bacterial transcriptional regulator JM955_RS04115 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS04115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JM955_RS04120 PF02583 Metal-sensitive transcriptional repressor JM955_RS04125 PF00581 Rhodanese-like domain JM955_RS04125 PF01206 Sulfurtransferase TusA JM955_RS04130 PF00581 Rhodanese-like domain JM955_RS04130 PF00753 Metallo-beta-lactamase superfamily JM955_RS04135 PF01206 Sulfurtransferase TusA JM955_RS04140 PF00581 Rhodanese-like domain JM955_RS04150 PF13686 DsrE/DsrF/DrsH-like family JM955_RS04155 PF01925 Sulfite exporter TauE/SafE JM955_RS04165 PF03816 Cell envelope-related transcriptional attenuator domain JM955_RS04170 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS04170 PF00107 Zinc-binding dehydrogenase JM955_RS04175 PF02690 Na+/Pi-cotransporter JM955_RS04180 PF07690 Major Facilitator Superfamily JM955_RS04190 PF05043 Mga helix-turn-helix domain JM955_RS04190 PF08279 HTH domain JM955_RS04190 PF00874 PRD domain JM955_RS04190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JM955_RS04195 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JM955_RS04200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JM955_RS04205 PF02378 Phosphotransferase system, EIIC JM955_RS04220 PF06725 3D domain JM955_RS04220 PF01476 LysM domain JM955_RS04225 PF02687 FtsX-like permease family JM955_RS04225 PF12704 MacB-like periplasmic core domain JM955_RS04230 PF00005 ABC transporter JM955_RS04240 PF09529 Integral membrane protein (intg_mem_TP0381) JM955_RS04255 PF05525 Branched-chain amino acid transport protein JM955_RS04260 PF05067 Manganese containing catalase JM955_RS04265 PF12652 CotJB protein JM955_RS04270 PF11007 Spore coat associated protein JA (CotJA) JM955_RS04285 PF02735 Ku70/Ku80 beta-barrel domain JM955_RS04295 PF09335 SNARE associated Golgi protein JM955_RS04330 PF13520 Amino acid permease JM955_RS04335 PF00999 Sodium/hydrogen exchanger family JM955_RS04345 PF01380 SIS domain JM955_RS04345 PF01418 Helix-turn-helix domain, rpiR family JM955_RS04350 PF13580 SIS domain JM955_RS04355 PF00367 phosphotransferase system, EIIB JM955_RS04355 PF02378 Phosphotransferase system, EIIC JM955_RS04365 PF07681 DoxX JM955_RS04380 PF00892 EamA-like transporter family JM955_RS04385 PF01037 Lrp/AsnC ligand binding domain JM955_RS04390 PF14698 Argininosuccinate lyase C-terminal JM955_RS04390 PF00206 Lyase JM955_RS04390 PF00583 Acetyltransferase (GNAT) family JM955_RS04395 PF00106 short chain dehydrogenase JM955_RS04400 PF13411 MerR HTH family regulatory protein JM955_RS04405 PF00893 Small Multidrug Resistance protein JM955_RS04415 PF17934 Tetracyclin repressor-like, C-terminal domain JM955_RS04415 PF00440 Bacterial regulatory proteins, tetR family JM955_RS04420 PF07690 Major Facilitator Superfamily JM955_RS04425 PF01638 HxlR-like helix-turn-helix JM955_RS04435 PF02525 Flavodoxin-like fold JM955_RS04445 PF01965 DJ-1/PfpI family JM955_RS04450 PF18011 C-terminal domain found in long catalases JM955_RS04450 PF06628 Catalase-related immune-responsive JM955_RS04450 PF00199 Catalase JM955_RS04460 PF13520 Amino acid permease JM955_RS04465 PF01177 Asp/Glu/Hydantoin racemase JM955_RS04475 PF00171 Aldehyde dehydrogenase family JM955_RS04480 PF00664 ABC transporter transmembrane region JM955_RS04480 PF00005 ABC transporter JM955_RS04485 PF00005 ABC transporter JM955_RS04485 PF00664 ABC transporter transmembrane region JM955_RS04490 PF00497 Bacterial extracellular solute-binding proteins, family 3 JM955_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS04500 PF00005 ABC transporter JM955_RS04505 PF00269 Small, acid-soluble spore proteins, alpha/beta type JM955_RS04515 PF14398 YheC/D like ATP-grasp JM955_RS04525 PF04286 Protein of unknown function (DUF445) JM955_RS04530 PF06133 Control of competence regulator ComK, YlbF/YmcA JM955_RS04535 PF07730 Histidine kinase JM955_RS04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS04540 PF00072 Response regulator receiver domain JM955_RS04540 PF00196 Bacterial regulatory proteins, luxR family JM955_RS04555 PF07282 Putative transposase DNA-binding domain JM955_RS04555 PF12323 Helix-turn-helix domain JM955_RS04555 PF01385 Probable transposase JM955_RS04560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JM955_RS04560 PF00205 Thiamine pyrophosphate enzyme, central domain JM955_RS04560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JM955_RS04565 PF03306 Alpha-acetolactate decarboxylase JM955_RS04570 PF02245 Methylpurine-DNA glycosylase (MPG) JM955_RS04580 PF17210 SdrD B-like domain JM955_RS04580 PF10425 C-terminus of bacterial fibrinogen-binding adhesin JM955_RS04580 PF04650 YSIRK type signal peptide JM955_RS04580 PF00746 LPXTG cell wall anchor motif JM955_RS04580 PF17961 Bacterial Ig domain JM955_RS04585 PF01510 N-acetylmuramoyl-L-alanine amidase JM955_RS04585 PF01471 Putative peptidoglycan binding domain JM955_RS04590 PF04055 Radical SAM superfamily JM955_RS04595 PF00501 AMP-binding enzyme JM955_RS04595 PF13193 AMP-binding enzyme C-terminal domain JM955_RS04610 PF00916 Sulfate permease family JM955_RS04610 PF01740 STAS domain JM955_RS04615 PF14667 Polysaccharide biosynthesis C-terminal domain JM955_RS04615 PF01943 Polysaccharide biosynthesis protein JM955_RS04635 PF00378 Enoyl-CoA hydratase/isomerase JM955_RS04655 PF05343 M42 glutamyl aminopeptidase JM955_RS04660 PF01520 N-acetylmuramoyl-L-alanine amidase JM955_RS04660 PF00395 S-layer homology domain JM955_RS04670 PF11121 Protein of unknown function (DUF2639) JM955_RS04675 PF05544 Proline racemase JM955_RS04680 PF02423 Ornithine cyclodeaminase/mu-crystallin family JM955_RS04690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS04695 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS04700 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS04700 PF12911 N-terminal TM domain of oligopeptide transport permease C JM955_RS04705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JM955_RS04705 PF00005 ABC transporter JM955_RS04710 PF00005 ABC transporter JM955_RS04710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JM955_RS04755 PF00083 Sugar (and other) transporter JM955_RS04760 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JM955_RS04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS04765 PF08279 HTH domain JM955_RS04765 PF00072 Response regulator receiver domain JM955_RS04765 PF12431 Transcriptional regulator JM955_RS04770 PF03401 Tripartite tricarboxylate transporter family receptor JM955_RS04785 PF02342 TerD domain JM955_RS04825 PF00772 DnaB-like helicase N terminal domain JM955_RS04825 PF03796 DnaB-like helicase C terminal domain JM955_RS04840 PF01925 Sulfite exporter TauE/SafE JM955_RS04855 PF07690 Major Facilitator Superfamily JM955_RS04865 PF09680 Family of unknown function JM955_RS04870 PF13302 Acetyltransferase (GNAT) domain JM955_RS04890 PF10026 Predicted Zn-dependent protease (DUF2268) JM955_RS04895 PF13411 MerR HTH family regulatory protein JM955_RS04900 PF00144 Beta-lactamase JM955_RS04915 PF10842 Protein of unknown function (DUF2642) JM955_RS04930 PF02559 CarD-like/TRCF domain JM955_RS04945 PF00313 'Cold-shock' DNA-binding domain JM955_RS04950 PF01609 Transposase DDE domain JM955_RS04960 PF00005 ABC transporter JM955_RS04975 PF01569 PAP2 superfamily JM955_RS04985 PF04650 YSIRK type signal peptide JM955_RS04985 PF17961 Bacterial Ig domain JM955_RS04985 PF00746 LPXTG cell wall anchor motif JM955_RS04985 PF17210 SdrD B-like domain JM955_RS05055 PF01066 CDP-alcohol phosphatidyltransferase JM955_RS05070 PF07690 Major Facilitator Superfamily JM955_RS05085 PF02733 Dak1 domain JM955_RS05095 PF02733 Dak1 domain JM955_RS05135 PF18801 response regulator aspartate phosphatase H, N terminal JM955_RS05145 PF00395 S-layer homology domain JM955_RS05190 PF11181 Heat induced stress protein YflT JM955_RS05195 PF05532 CsbD-like JM955_RS05210 PF01740 STAS domain JM955_RS05215 PF13581 Histidine kinase-like ATPase domain JM955_RS05220 PF04545 Sigma-70, region 4 JM955_RS05220 PF04539 Sigma-70 region 3 JM955_RS05220 PF04542 Sigma-70 region 2 JM955_RS05230 PF13426 PAS domain JM955_RS05230 PF07228 Stage II sporulation protein E (SpoIIE) JM955_RS05235 PF01739 CheR methyltransferase, SAM binding domain JM955_RS05235 PF03705 CheR methyltransferase, all-alpha domain JM955_RS05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS05240 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS05240 PF01627 Hpt domain JM955_RS05240 PF00072 Response regulator receiver domain JM955_RS05265 PF01906 Putative heavy-metal-binding JM955_RS05285 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JM955_RS05290 PF11121 Protein of unknown function (DUF2639) JM955_RS05305 PF00149 Calcineurin-like phosphoesterase JM955_RS05310 PF13514 AAA domain JM955_RS05315 PF01336 OB-fold nucleic acid binding domain JM955_RS05315 PF01966 HD domain JM955_RS05325 PF01810 LysE type translocator JM955_RS05330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS05335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS05340 PF18801 response regulator aspartate phosphatase H, N terminal JM955_RS05340 PF17874 MalT-like TPR region JM955_RS05350 PF00561 alpha/beta hydrolase fold JM955_RS05350 PF08386 TAP-like protein JM955_RS05355 PF14147 Sporulation protein YhaL JM955_RS05365 PF00190 Cupin JM955_RS05370 PF01381 Helix-turn-helix JM955_RS05375 PF12323 Helix-turn-helix domain JM955_RS05375 PF01385 Probable transposase JM955_RS05375 PF07282 Putative transposase DNA-binding domain JM955_RS05380 PF04309 Glycerol-3-phosphate responsive antiterminator JM955_RS05385 PF00230 Major intrinsic protein JM955_RS05390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JM955_RS05390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JM955_RS05395 PF01266 FAD dependent oxidoreductase JM955_RS05395 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JM955_RS05405 PF04542 Sigma-70 region 2 JM955_RS05405 PF08281 Sigma-70, region 4 JM955_RS05415 PF01098 Cell cycle protein JM955_RS05420 PF13538 UvrD-like helicase C-terminal domain JM955_RS05440 PF01047 MarR family JM955_RS05445 PF12732 YtxH-like protein JM955_RS05450 PF01230 HIT domain JM955_RS05455 PF00005 ABC transporter JM955_RS05460 PF05975 Bacterial ABC transporter protein EcsB JM955_RS05465 PF12787 EcsC protein family JM955_RS05505 PF00440 Bacterial regulatory proteins, tetR family JM955_RS05505 PF17934 Tetracyclin repressor-like, C-terminal domain JM955_RS05515 PF03703 Bacterial PH domain JM955_RS05520 PF03703 Bacterial PH domain JM955_RS05555 PF10014 2OG-Fe dioxygenase JM955_RS05565 PF00892 EamA-like transporter family JM955_RS05570 PF03703 Bacterial PH domain JM955_RS05575 PF03703 Bacterial PH domain JM955_RS05580 PF03992 Antibiotic biosynthesis monooxygenase JM955_RS05585 PF00912 Transglycosylase JM955_RS05585 PF00905 Penicillin binding protein transpeptidase domain JM955_RS05590 PF01208 Uroporphyrinogen decarboxylase (URO-D) JM955_RS05595 PF00762 Ferrochelatase JM955_RS05600 PF01593 Flavin containing amine oxidoreductase JM955_RS05625 PF03965 Penicillinase repressor JM955_RS05635 PF00440 Bacterial regulatory proteins, tetR family JM955_RS05635 PF17932 Tetracyclin repressor-like, C-terminal domain JM955_RS05660 PF13302 Acetyltransferase (GNAT) domain JM955_RS05665 PF00356 Bacterial regulatory proteins, lacI family JM955_RS05670 PF14149 YhfH-like protein JM955_RS05675 PF12706 Beta-lactamase superfamily domain JM955_RS05680 PF03099 Biotin/lipoate A/B protein ligase family JM955_RS05680 PF10437 Bacterial lipoate protein ligase C-terminus JM955_RS05690 PF00501 AMP-binding enzyme JM955_RS05690 PF13193 AMP-binding enzyme C-terminal domain JM955_RS05695 PF01520 N-acetylmuramoyl-L-alanine amidase JM955_RS05695 PF00395 S-layer homology domain JM955_RS05705 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS05710 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS05715 PF00005 ABC transporter JM955_RS05715 PF17850 CysA C-terminal regulatory domain JM955_RS05715 PF12857 TOBE-like domain JM955_RS05720 PF07968 Leukocidin/Hemolysin toxin family JM955_RS05730 PF00149 Calcineurin-like phosphoesterase JM955_RS05735 PF01966 HD domain JM955_RS05745 PF04542 Sigma-70 region 2 JM955_RS05745 PF08281 Sigma-70, region 4 JM955_RS05750 PF06445 GyrI-like small molecule binding domain JM955_RS05750 PF12833 Helix-turn-helix domain JM955_RS05760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS05760 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS05765 PF00072 Response regulator receiver domain JM955_RS05765 PF00486 Transcriptional regulatory protein, C terminal JM955_RS05785 PF01435 Peptidase family M48 JM955_RS05785 PF16491 CAAX prenyl protease N-terminal, five membrane helices JM955_RS05790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS05790 PF02743 Cache domain JM955_RS05790 PF00672 HAMP domain JM955_RS05800 PF00395 S-layer homology domain JM955_RS05800 PF00331 Glycosyl hydrolase family 10 JM955_RS05800 PF02018 Carbohydrate binding domain JM955_RS05800 PF06452 Carbohydrate family 9 binding domain-like JM955_RS05810 PF01274 Malate synthase JM955_RS05815 PF00463 Isocitrate lyase family JM955_RS05830 PF00313 'Cold-shock' DNA-binding domain JM955_RS05850 PF09335 SNARE associated Golgi protein JM955_RS05855 PF10502 Signal peptidase, peptidase S26 JM955_RS05860 PF13361 UvrD-like helicase C-terminal domain JM955_RS05860 PF12705 PD-(D/E)XK nuclease superfamily JM955_RS05865 PF00580 UvrD/REP helicase N-terminal domain JM955_RS05865 PF12705 PD-(D/E)XK nuclease superfamily JM955_RS05865 PF13361 UvrD-like helicase C-terminal domain JM955_RS05870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JM955_RS05870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JM955_RS05870 PF01000 RNA polymerase Rpb3/RpoA insert domain JM955_RS05875 PF10676 Spore germination protein gerPA/gerPF JM955_RS05880 PF10970 Spore germination protein GerPE JM955_RS05890 PF10737 Spore germination protein GerPC JM955_RS05895 PF10803 Spore germination GerPB JM955_RS05900 PF10676 Spore germination protein gerPA/gerPF JM955_RS05905 PF09388 Spo0E like sporulation regulatory protein JM955_RS05910 PF01557 Fumarylacetoacetate (FAA) hydrolase family JM955_RS05920 PF00202 Aminotransferase class-III JM955_RS05925 PF07457 Protein of unknown function (DUF1516) JM955_RS05935 PF13537 Glutamine amidotransferase domain JM955_RS05935 PF00733 Asparagine synthase JM955_RS05940 PF00762 Ferrochelatase JM955_RS05945 PF06628 Catalase-related immune-responsive JM955_RS05945 PF00199 Catalase JM955_RS05950 PF00909 Ammonium Transporter Family JM955_RS05955 PF00128 Alpha amylase, catalytic domain JM955_RS05965 PF04461 Protein of unknown function (DUF520) JM955_RS05970 PF13509 S1 domain JM955_RS05970 PF17783 CvfB-like winged helix domain JM955_RS05985 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS05985 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JM955_RS05990 PF12758 Protein of unknown function (DUF3813) JM955_RS06005 PF14168 YjzC-like protein JM955_RS06010 PF10431 C-terminal, D2-small domain, of ClpB protein JM955_RS06010 PF02861 Clp amino terminal domain, pathogenicity island component JM955_RS06010 PF17871 AAA lid domain JM955_RS06010 PF07724 AAA domain (Cdc48 subfamily) JM955_RS06010 PF00004 ATPase family associated with various cellular activities (AAA) JM955_RS06030 PF10815 ComZ JM955_RS06035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JM955_RS06035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JM955_RS06040 PF00109 Beta-ketoacyl synthase, N-terminal domain JM955_RS06040 PF02801 Beta-ketoacyl synthase, C-terminal domain JM955_RS06045 PF10026 Predicted Zn-dependent protease (DUF2268) JM955_RS06050 PF12227 Protein of unknown function (DUF3603) JM955_RS06055 PF00579 tRNA synthetases class I (W and Y) JM955_RS06065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS06075 PF12911 N-terminal TM domain of oligopeptide transport permease C JM955_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS06080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JM955_RS06080 PF00005 ABC transporter JM955_RS06085 PF00005 ABC transporter JM955_RS06085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JM955_RS06090 PF01554 MatE JM955_RS06095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS06105 PF03960 ArsC family JM955_RS06110 PF03741 Integral membrane protein TerC family JM955_RS06115 PF05389 Negative regulator of genetic competence (MecA) JM955_RS06120 PF13091 PLD-like domain JM955_RS06120 PF13396 Phospholipase_D-nuclease N-terminal JM955_RS06130 PF08439 Oligopeptidase F JM955_RS06130 PF01432 Peptidase family M3 JM955_RS06145 PF01152 Bacterial-like globin JM955_RS06150 PF01928 CYTH domain JM955_RS06160 PF04607 Region found in RelA / SpoT proteins JM955_RS06165 PF01513 ATP-NAD kinase JM955_RS06170 PF00849 RNA pseudouridylate synthase JM955_RS06180 PF00149 Calcineurin-like phosphoesterase JM955_RS06185 PF01098 Cell cycle protein JM955_RS06190 PF00535 Glycosyl transferase family 2 JM955_RS06195 PF08241 Methyltransferase domain JM955_RS06200 PF05711 Macrocin-O-methyltransferase (TylF) JM955_RS06210 PF13181 Tetratricopeptide repeat JM955_RS06210 PF00535 Glycosyl transferase family 2 JM955_RS06230 PF00483 Nucleotidyl transferase JM955_RS06235 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JM955_RS06240 PF16363 GDP-mannose 4,6 dehydratase JM955_RS06245 PF04321 RmlD substrate binding domain JM955_RS06265 PF07098 Protein of unknown function (DUF1360) JM955_RS06285 PF00580 UvrD/REP helicase N-terminal domain JM955_RS06285 PF13361 UvrD-like helicase C-terminal domain JM955_RS06290 PF13673 Acetyltransferase (GNAT) domain JM955_RS06300 PF00756 Putative esterase JM955_RS06325 PF02368 Bacterial Ig-like domain (group 2) JM955_RS06330 PF00474 Sodium:solute symporter family JM955_RS06335 PF00425 chorismate binding enzyme JM955_RS06335 PF04715 Anthranilate synthase component I, N terminal region JM955_RS06340 PF00117 Glutamine amidotransferase class-I JM955_RS06340 PF02885 Glycosyl transferase family, helical bundle domain JM955_RS06340 PF00591 Glycosyl transferase family, a/b domain JM955_RS06345 PF00591 Glycosyl transferase family, a/b domain JM955_RS06345 PF02885 Glycosyl transferase family, helical bundle domain JM955_RS06350 PF00218 Indole-3-glycerol phosphate synthase JM955_RS06355 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JM955_RS06360 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS06365 PF00290 Tryptophan synthase alpha chain JM955_RS06385 PF02652 L-lactate permease JM955_RS06395 PF10042 Uncharacterized conserved protein (DUF2278) JM955_RS06430 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS06430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JM955_RS06445 PF01209 ubiE/COQ5 methyltransferase family JM955_RS06450 PF00881 Nitroreductase family JM955_RS06465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JM955_RS06465 PF00364 Biotin-requiring enzyme JM955_RS06465 PF02817 e3 binding domain JM955_RS06470 PF00676 Dehydrogenase E1 component JM955_RS06470 PF16870 2-oxoglutarate dehydrogenase C-terminal JM955_RS06470 PF02779 Transketolase, pyrimidine binding domain JM955_RS06475 PF01381 Helix-turn-helix JM955_RS06540 PF13649 Methyltransferase domain JM955_RS06550 PF07943 Penicillin-binding protein 5, C-terminal domain JM955_RS06550 PF00768 D-alanyl-D-alanine carboxypeptidase JM955_RS06560 PF12389 Camelysin metallo-endopeptidase JM955_RS06570 PF12389 Camelysin metallo-endopeptidase JM955_RS06575 PF01381 Helix-turn-helix JM955_RS06575 PF08671 Anti-repressor SinI JM955_RS06585 PF05547 Immune inhibitor A peptidase M6 JM955_RS06590 PF00171 Aldehyde dehydrogenase family JM955_RS06595 PF00005 ABC transporter JM955_RS06595 PF08402 TOBE domain JM955_RS06600 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS06605 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS06610 PF13416 Bacterial extracellular solute-binding protein JM955_RS06620 PF03176 MMPL family JM955_RS06630 PF00849 RNA pseudouridylate synthase JM955_RS06630 PF01479 S4 domain JM955_RS06640 PF00188 Cysteine-rich secretory protein family JM955_RS06645 PF13183 4Fe-4S dicluster domain JM955_RS06645 PF02754 Cysteine-rich domain JM955_RS06650 PF01565 FAD binding domain JM955_RS06650 PF02913 FAD linked oxidases, C-terminal domain JM955_RS06655 PF17853 GGDEF-like domain JM955_RS06655 PF05651 Putative sugar diacid recognition JM955_RS06655 PF13556 PucR C-terminal helix-turn-helix domain JM955_RS06665 PF00072 Response regulator receiver domain JM955_RS06665 PF00486 Transcriptional regulatory protein, C terminal JM955_RS06670 PF00672 HAMP domain JM955_RS06670 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS06670 PF00989 PAS fold JM955_RS06670 PF18698 Histidine kinase sensor domain JM955_RS06670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS06675 PF07729 FCD domain JM955_RS06675 PF00392 Bacterial regulatory proteins, gntR family JM955_RS06680 PF02754 Cysteine-rich domain JM955_RS06685 PF11870 Domain of unknown function (DUF3390) JM955_RS06685 PF13183 4Fe-4S dicluster domain JM955_RS06685 PF02589 LUD domain JM955_RS06690 PF02589 LUD domain JM955_RS06695 PF01478 Type IV leader peptidase family JM955_RS06695 PF06750 Bacterial Peptidase A24 N-terminal domain JM955_RS06705 PF01226 Formate/nitrite transporter JM955_RS06710 PF03741 Integral membrane protein TerC family JM955_RS06715 PF02386 Cation transport protein JM955_RS06720 PF00269 Small, acid-soluble spore proteins, alpha/beta type JM955_RS06725 PF01575 MaoC like domain JM955_RS06750 PF00561 alpha/beta hydrolase fold JM955_RS06760 PF02386 Cation transport protein JM955_RS06780 PF00005 ABC transporter JM955_RS06780 PF08402 TOBE domain JM955_RS06785 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS06790 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS06795 PF00266 Aminotransferase class-V JM955_RS06805 PF08220 DeoR-like helix-turn-helix domain JM955_RS06805 PF00455 DeoR C terminal sensor domain JM955_RS06815 PF00596 Class II Aldolase and Adducin N-terminal domain JM955_RS06825 PF04748 Divergent polysaccharide deacetylase JM955_RS06830 PF09388 Spo0E like sporulation regulatory protein JM955_RS06835 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS06835 PF02743 Cache domain JM955_RS06840 PF01047 MarR family JM955_RS06850 PF12867 DinB superfamily JM955_RS06855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS06855 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS06855 PF13188 PAS domain JM955_RS06855 PF00989 PAS fold JM955_RS06855 PF13426 PAS domain JM955_RS06860 PF06508 Queuosine biosynthesis protein QueC JM955_RS06865 PF01242 6-pyruvoyl tetrahydropterin synthase JM955_RS06870 PF04055 Radical SAM superfamily JM955_RS06875 PF14489 QueF-like protein JM955_RS06880 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JM955_RS06910 PF07972 NrdI Flavodoxin like JM955_RS06915 PF02867 Ribonucleotide reductase, barrel domain JM955_RS06915 PF00317 Ribonucleotide reductase, all-alpha domain JM955_RS06915 PF08343 Ribonucleotide reductase N-terminal JM955_RS06920 PF00268 Ribonucleotide reductase, small chain JM955_RS06925 PF00392 Bacterial regulatory proteins, gntR family JM955_RS06930 PF00005 ABC transporter JM955_RS06940 PF00005 ABC transporter JM955_RS06960 PF01037 Lrp/AsnC ligand binding domain JM955_RS06970 PF00857 Isochorismatase family JM955_RS06980 PF02016 LD-carboxypeptidase N-terminal domain JM955_RS06980 PF17676 LD-carboxypeptidase C-terminal domain JM955_RS06985 PF03060 Nitronate monooxygenase JM955_RS06990 PF04914 DltD protein JM955_RS06995 PF00550 Phosphopantetheine attachment site JM955_RS07000 PF03062 MBOAT, membrane-bound O-acyltransferase family JM955_RS07005 PF13193 AMP-binding enzyme C-terminal domain JM955_RS07005 PF00501 AMP-binding enzyme JM955_RS07015 PF01546 Peptidase family M20/M25/M40 JM955_RS07015 PF07687 Peptidase dimerisation domain JM955_RS07025 PF00258 Flavodoxin JM955_RS07040 PF01636 Phosphotransferase enzyme family JM955_RS07060 PF01554 MatE JM955_RS07065 PF02673 Bacitracin resistance protein BacA JM955_RS07080 PF01047 MarR family JM955_RS07090 PF00375 Sodium:dicarboxylate symporter family JM955_RS07095 PF02386 Cation transport protein JM955_RS07105 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JM955_RS07115 PF03698 Uncharacterised protein family (UPF0180) JM955_RS07125 PF01063 Amino-transferase class IV JM955_RS07130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JM955_RS07130 PF00205 Thiamine pyrophosphate enzyme, central domain JM955_RS07130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JM955_RS07135 PF01842 ACT domain JM955_RS07135 PF10369 Small subunit of acetolactate synthase JM955_RS07140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JM955_RS07140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JM955_RS07145 PF08502 LeuA allosteric (dimerisation) domain JM955_RS07145 PF00682 HMGL-like JM955_RS07150 PF00180 Isocitrate/isopropylmalate dehydrogenase JM955_RS07155 PF00330 Aconitase family (aconitate hydratase) JM955_RS07160 PF00694 Aconitase C-terminal domain JM955_RS07165 PF13393 Histidyl-tRNA synthetase JM955_RS07170 PF01634 ATP phosphoribosyltransferase JM955_RS07175 PF00815 Histidinol dehydrogenase JM955_RS07180 PF00475 Imidazoleglycerol-phosphate dehydratase JM955_RS07185 PF00117 Glutamine amidotransferase class-I JM955_RS07190 PF00977 Histidine biosynthesis protein JM955_RS07195 PF00977 Histidine biosynthesis protein JM955_RS07200 PF01502 Phosphoribosyl-AMP cyclohydrolase JM955_RS07205 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JM955_RS07210 PF02811 PHP domain JM955_RS07220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JM955_RS07220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JM955_RS07225 PF01066 CDP-alcohol phosphatidyltransferase JM955_RS07230 PF00884 Sulfatase JM955_RS07240 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JM955_RS07240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JM955_RS07250 PF01507 Phosphoadenosine phosphosulfate reductase family JM955_RS07255 PF01747 ATP-sulfurylase JM955_RS07255 PF14306 PUA-like domain JM955_RS07265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JM955_RS07265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JM955_RS07275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JM955_RS07280 PF01903 CbiX JM955_RS07290 PF00209 Sodium:neurotransmitter symporter family JM955_RS07305 PF00375 Sodium:dicarboxylate symporter family JM955_RS07315 PF03553 Na+/H+ antiporter family JM955_RS07330 PF09922 Cell wall-active antibiotics response 4TMS YvqF JM955_RS07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS07335 PF07730 Histidine kinase JM955_RS07335 PF00672 HAMP domain JM955_RS07340 PF00196 Bacterial regulatory proteins, luxR family JM955_RS07340 PF00072 Response regulator receiver domain JM955_RS07350 PF05525 Branched-chain amino acid transport protein JM955_RS07360 PF01209 ubiE/COQ5 methyltransferase family JM955_RS07385 PF00175 Oxidoreductase NAD-binding domain JM955_RS07385 PF00042 Globin JM955_RS07385 PF00970 Oxidoreductase FAD-binding domain JM955_RS07400 PF01925 Sulfite exporter TauE/SafE JM955_RS07405 PF01384 Phosphate transporter family JM955_RS07410 PF01865 Protein of unknown function DUF47 JM955_RS07415 PF00912 Transglycosylase JM955_RS07415 PF00905 Penicillin binding protein transpeptidase domain JM955_RS07430 PF00989 PAS fold JM955_RS07430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS07430 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS07435 PF01904 Protein of unknown function DUF72 JM955_RS07445 PF00589 Phage integrase family JM955_RS07450 PF00989 PAS fold JM955_RS07450 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS07450 PF16736 Single Cache-like JM955_RS07455 PF01048 Phosphorylase superfamily JM955_RS07465 PF03706 Lysylphosphatidylglycerol synthase TM region JM955_RS07465 PF09924 Uncharacterised conserved protein (DUF2156) JM955_RS07480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JM955_RS07480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JM955_RS07485 PF00768 D-alanyl-D-alanine carboxypeptidase JM955_RS07485 PF07943 Penicillin-binding protein 5, C-terminal domain JM955_RS07490 PF07670 Nucleoside recognition JM955_RS07495 PF07670 Nucleoside recognition JM955_RS07500 PF01479 S4 domain JM955_RS07500 PF00849 RNA pseudouridylate synthase JM955_RS07505 PF00578 AhpC/TSA family JM955_RS07510 PF05140 ResB-like family JM955_RS07515 PF01578 Cytochrome C assembly protein JM955_RS07520 PF00486 Transcriptional regulatory protein, C terminal JM955_RS07520 PF00072 Response regulator receiver domain JM955_RS07525 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS07525 PF00672 HAMP domain JM955_RS07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS07525 PF18698 Histidine kinase sensor domain JM955_RS07525 PF00989 PAS fold JM955_RS07530 PF01923 Cobalamin adenosyltransferase JM955_RS07545 PF12822 ECF transporter, substrate-specific component JM955_RS07560 PF00271 Helicase conserved C-terminal domain JM955_RS07560 PF00270 DEAD/DEAH box helicase JM955_RS07565 PF02517 CPBP intramembrane metalloprotease JM955_RS07575 PF00149 Calcineurin-like phosphoesterase JM955_RS07580 PF13411 MerR HTH family regulatory protein JM955_RS07585 PF05389 Negative regulator of genetic competence (MecA) JM955_RS07590 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JM955_RS07590 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JM955_RS07615 PF00710 Asparaginase, N-terminal JM955_RS07615 PF17763 Glutaminase/Asparaginase C-terminal domain JM955_RS07625 PF02224 Cytidylate kinase JM955_RS07630 PF00575 S1 RNA binding domain JM955_RS07635 PF01070 FMN-dependent dehydrogenase JM955_RS07640 PF14140 YpzI-like protein JM955_RS07650 PF14045 YIEGIA protein JM955_RS07660 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JM955_RS07660 PF01926 50S ribosome-binding GTPase JM955_RS07665 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JM955_RS07665 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JM955_RS07675 PF10966 Protein of unknown function (DUF2768) JM955_RS07685 PF09547 Stage IV sporulation protein A (spore_IV_A) JM955_RS07690 PF00216 Bacterial DNA-binding protein JM955_RS07695 PF01227 GTP cyclohydrolase I JM955_RS07700 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JM955_RS07705 PF01209 ubiE/COQ5 methyltransferase family JM955_RS07710 PF00348 Polyprenyl synthetase JM955_RS07715 PF00334 Nucleoside diphosphate kinase JM955_RS07720 PF01264 Chorismate synthase JM955_RS07725 PF01761 3-dehydroquinate synthase JM955_RS07730 PF00155 Aminotransferase class I and II JM955_RS07740 PF08858 IDEAL domain JM955_RS07740 PF08864 UPF0302 domain JM955_RS07745 PF10673 Protein of unknown function (DUF2487) JM955_RS07750 PF00355 Rieske [2Fe-2S] domain JM955_RS07755 PF00033 Cytochrome b/b6/petB JM955_RS07760 PF00032 Cytochrome b(C-terminal)/b6/petD JM955_RS07760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JM955_RS07765 PF07187 Protein of unknown function (DUF1405) JM955_RS07775 PF09577 Sporulation protein YpjB (SpoYpjB) JM955_RS07780 PF04298 Putative neutral zinc metallopeptidase JM955_RS07790 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JM955_RS07790 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS07795 PF03819 MazG nucleotide pyrophosphohydrolase domain JM955_RS07800 PF05173 Dihydrodipicolinate reductase, C-terminus JM955_RS07800 PF01113 Dihydrodipicolinate reductase, N-terminus JM955_RS07805 PF02142 MGS-like domain JM955_RS07810 PF02585 GlcNAc-PI de-N-acetylase JM955_RS07815 PF13439 Glycosyltransferase Family 4 JM955_RS07815 PF00534 Glycosyl transferases group 1 JM955_RS07820 PF01743 Poly A polymerase head domain JM955_RS07820 PF12627 Probable RNA and SrmB- binding site of polymerase A JM955_RS07820 PF13735 tRNA nucleotidyltransferase domain 2 putative JM955_RS07825 PF08279 HTH domain JM955_RS07825 PF03099 Biotin/lipoate A/B protein ligase family JM955_RS07825 PF02237 Biotin protein ligase C terminal domain JM955_RS07835 PF02548 Ketopantoate hydroxymethyltransferase JM955_RS07840 PF02569 Pantoate-beta-alanine ligase JM955_RS07845 PF02261 Aspartate decarboxylase JM955_RS07850 PF04851 Type III restriction enzyme, res subunit JM955_RS07850 PF13307 Helicase C-terminal domain JM955_RS07850 PF00929 Exonuclease JM955_RS07855 PF14084 Protein of unknown function (DUF4264) JM955_RS07865 PF00155 Aminotransferase class I and II JM955_RS07870 PF07261 Replication initiation and membrane attachment JM955_RS07875 PF00633 Helix-hairpin-helix motif JM955_RS07875 PF10576 Iron-sulfur binding domain of endonuclease III JM955_RS07875 PF00730 HhH-GPD superfamily base excision DNA repair protein JM955_RS07885 PF00912 Transglycosylase JM955_RS07885 PF00905 Penicillin binding protein transpeptidase domain JM955_RS07890 PF03838 Recombination protein U JM955_RS07895 PF10720 Protein of unknown function (DUF2515) JM955_RS07925 PF06908 YspA SLOG family JM955_RS07930 PF05103 DivIVA protein JM955_RS07940 PF02926 THUMP domain JM955_RS07940 PF01170 Putative RNA methylase family UPF0020 JM955_RS07950 PF13307 Helicase C-terminal domain JM955_RS07955 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JM955_RS07965 PF00557 Metallopeptidase family M24 JM955_RS07970 PF00156 Phosphoribosyl transferase domain JM955_RS07975 PF00860 Permease family JM955_RS07980 PF04235 Protein of unknown function (DUF418) JM955_RS07980 PF07786 Protein of unknown function (DUF1624) JM955_RS07985 PF00350 Dynamin family JM955_RS07995 PF00583 Acetyltransferase (GNAT) family JM955_RS08000 PF10752 Protein of unknown function (DUF2533) JM955_RS08005 PF00581 Rhodanese-like domain JM955_RS08040 PF00689 Cation transporting ATPase, C-terminus JM955_RS08040 PF00690 Cation transporter/ATPase, N-terminus JM955_RS08045 PF01367 5'-3' exonuclease, C-terminal SAM fold JM955_RS08045 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JM955_RS08060 PF13807 G-rich domain on putative tyrosine kinase JM955_RS08060 PF02706 Chain length determinant protein JM955_RS08070 PF02397 Bacterial sugar transferase JM955_RS08085 PF00535 Glycosyl transferase family 2 JM955_RS08090 PF00534 Glycosyl transferases group 1 JM955_RS08090 PF13439 Glycosyltransferase Family 4 JM955_RS08125 PF13456 Reverse transcriptase-like JM955_RS08130 PF01263 Aldose 1-epimerase JM955_RS08155 PF00313 'Cold-shock' DNA-binding domain JM955_RS08160 PF08892 YqcI/YcgG family JM955_RS08165 PF01810 LysE type translocator JM955_RS08185 PF00474 Sodium:solute symporter family JM955_RS08190 PF00202 Aminotransferase class-III JM955_RS08200 PF00999 Sodium/hydrogen exchanger family JM955_RS08205 PF06445 GyrI-like small molecule binding domain JM955_RS08205 PF13411 MerR HTH family regulatory protein JM955_RS08215 PF04239 Protein of unknown function (DUF421) JM955_RS08220 PF02698 DUF218 domain JM955_RS08235 PF00881 Nitroreductase family JM955_RS08285 PF17209 Hfq protein JM955_RS08295 PF01618 MotA/TolQ/ExbB proton channel family JM955_RS08300 PF13677 Membrane MotB of proton-channel complex MotA/MotB JM955_RS08300 PF00691 OmpA family JM955_RS08305 PF00072 Response regulator receiver domain JM955_RS08310 PF01584 CheW-like domain JM955_RS08310 PF01627 Hpt domain JM955_RS08310 PF07194 P2 response regulator binding domain JM955_RS08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS08310 PF02895 Signal transducing histidine kinase, homodimeric domain JM955_RS08315 PF04509 CheC-like family JM955_RS08315 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JM955_RS08330 PF01739 CheR methyltransferase, SAM binding domain JM955_RS08330 PF03705 CheR methyltransferase, all-alpha domain JM955_RS08350 PF00460 Flagella basal body rod protein JM955_RS08350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JM955_RS08355 PF00669 Bacterial flagellin N-terminal helical region JM955_RS08355 PF00700 Bacterial flagellin C-terminal helical region JM955_RS08375 PF00460 Flagella basal body rod protein JM955_RS08380 PF00460 Flagella basal body rod protein JM955_RS08380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JM955_RS08385 PF02049 Flagellar hook-basal body complex protein FliE JM955_RS08390 PF01514 Secretory protein of YscJ/FliF family JM955_RS08390 PF08345 Flagellar M-ring protein C-terminal JM955_RS08395 PF14842 FliG N-terminal domain JM955_RS08395 PF01706 FliG C-terminal domain JM955_RS08395 PF14841 FliG middle domain JM955_RS08405 PF18269 T3SS EscN ATPase C-terminal domain JM955_RS08405 PF02874 ATP synthase alpha/beta family, beta-barrel domain JM955_RS08405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JM955_RS08425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JM955_RS08425 PF00460 Flagella basal body rod protein JM955_RS08425 PF07559 Flagellar basal body protein FlaE JM955_RS08440 PF00072 Response regulator receiver domain JM955_RS08440 PF01584 CheW-like domain JM955_RS08445 PF12181 DNA binding domain of the motility gene repressor (MogR) JM955_RS08455 PF00700 Bacterial flagellin C-terminal helical region JM955_RS08455 PF00669 Bacterial flagellin N-terminal helical region JM955_RS08460 PF01464 Transglycosylase SLT domain JM955_RS08470 PF02154 Flagellar motor switch protein FliM JM955_RS08470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JM955_RS08475 PF04509 CheC-like family JM955_RS08475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JM955_RS08485 PF00813 FliP family JM955_RS08490 PF01313 Bacterial export proteins, family 3 JM955_RS08500 PF01312 FlhB HrpN YscU SpaS Family JM955_RS08505 PF00771 FHIPEP family JM955_RS08510 PF00448 SRP54-type protein, GTPase domain JM955_RS08515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JM955_RS08515 PF00460 Flagella basal body rod protein JM955_RS08520 PF00296 Luciferase-like monooxygenase JM955_RS08525 PF01411 tRNA synthetases class II (A) JM955_RS08525 PF02272 DHHA1 domain JM955_RS08525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JM955_RS08560 PF03992 Antibiotic biosynthesis monooxygenase JM955_RS08565 PF08141 Small acid-soluble spore protein H family JM955_RS08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS08585 PF03466 LysR substrate binding domain JM955_RS08590 PF08402 TOBE domain JM955_RS08590 PF00005 ABC transporter JM955_RS08600 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS08615 PF10787 Uncharacterised protein from bacillus cereus group JM955_RS08635 PF00300 Histidine phosphatase superfamily (branch 1) JM955_RS08645 PF00561 alpha/beta hydrolase fold JM955_RS08655 PF01047 MarR family JM955_RS08665 PF13537 Glutamine amidotransferase domain JM955_RS08665 PF00733 Asparagine synthase JM955_RS08685 PF16916 Dimerisation domain of Zinc Transporter JM955_RS08685 PF01545 Cation efflux family JM955_RS08695 PF07729 FCD domain JM955_RS08695 PF00392 Bacterial regulatory proteins, gntR family JM955_RS08700 PF00892 EamA-like transporter family JM955_RS08710 PF02492 CobW/HypB/UreG, nucleotide-binding domain JM955_RS08710 PF07683 Cobalamin synthesis protein cobW C-terminal domain JM955_RS08715 PF03773 Predicted permease JM955_RS08730 PF03553 Na+/H+ antiporter family JM955_RS08735 PF13411 MerR HTH family regulatory protein JM955_RS08745 PF00206 Lyase JM955_RS08745 PF10415 Fumarase C C-terminus JM955_RS08760 PF01554 MatE JM955_RS08765 PF03575 Peptidase family S51 JM955_RS08785 PF02683 Cytochrome C biogenesis protein transmembrane region JM955_RS08790 PF00578 AhpC/TSA family JM955_RS08805 PF18801 response regulator aspartate phosphatase H, N terminal JM955_RS08820 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS08825 PF04286 Protein of unknown function (DUF445) JM955_RS08850 PF00072 Response regulator receiver domain JM955_RS08850 PF00196 Bacterial regulatory proteins, luxR family JM955_RS08855 PF13185 GAF domain JM955_RS08855 PF13492 GAF domain JM955_RS08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS08855 PF07730 Histidine kinase JM955_RS08860 PF00005 ABC transporter JM955_RS08875 PF13091 PLD-like domain JM955_RS08880 PF00696 Amino acid kinase family JM955_RS08885 PF00375 Sodium:dicarboxylate symporter family JM955_RS08890 PF00206 Lyase JM955_RS08890 PF10415 Fumarase C C-terminus JM955_RS08895 PF03949 Malic enzyme, NAD binding domain JM955_RS08895 PF00390 Malic enzyme, N-terminal domain JM955_RS08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS08905 PF00072 Response regulator receiver domain JM955_RS08905 PF08664 YcbB domain JM955_RS08910 PF00271 Helicase conserved C-terminal domain JM955_RS08910 PF00176 SNF2 family N-terminal domain JM955_RS08910 PF04434 SWIM zinc finger JM955_RS08920 PF03590 Aspartate-ammonia ligase JM955_RS08935 PF00696 Amino acid kinase family JM955_RS08935 PF13840 ACT domain JM955_RS08945 PF13761 Domain of unknown function (DUF4166) JM955_RS08950 PF14158 YndJ-like protein JM955_RS08955 PF00293 NUDIX domain JM955_RS08955 PF09297 NADH pyrophosphatase zinc ribbon domain JM955_RS08960 PF07690 Major Facilitator Superfamily JM955_RS08975 PF03976 Polyphosphate kinase 2 (PPK2) JM955_RS08980 PF10400 Virulence activator alpha C-term JM955_RS08980 PF03551 Transcriptional regulator PadR-like family JM955_RS08985 PF07690 Major Facilitator Superfamily JM955_RS08990 PF07690 Major Facilitator Superfamily JM955_RS08995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JM955_RS08995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JM955_RS09005 PF01926 50S ribosome-binding GTPase JM955_RS09005 PF13167 GTP-binding GTPase N-terminal JM955_RS09005 PF16360 GTP-binding GTPase Middle Region JM955_RS09010 PF07690 Major Facilitator Superfamily JM955_RS09015 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS09035 PF00209 Sodium:neurotransmitter symporter family JM955_RS09040 PF01522 Polysaccharide deacetylase JM955_RS09040 PF03422 Carbohydrate binding module (family 6) JM955_RS09040 PF00457 Glycosyl hydrolases family 11 JM955_RS09050 PF04239 Protein of unknown function (DUF421) JM955_RS09070 PF01625 Peptide methionine sulfoxide reductase JM955_RS09080 PF01063 Amino-transferase class IV JM955_RS09085 PF00205 Thiamine pyrophosphate enzyme, central domain JM955_RS09085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JM955_RS09085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JM955_RS09095 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JM955_RS09095 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JM955_RS09100 PF00920 Dehydratase family JM955_RS09105 PF00585 C-terminal regulatory domain of Threonine dehydratase JM955_RS09105 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS09115 PF09587 Bacterial capsule synthesis protein PGA_cap JM955_RS09130 PF07690 Major Facilitator Superfamily JM955_RS09135 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JM955_RS09145 PF01048 Phosphorylase superfamily JM955_RS09150 PF00072 Response regulator receiver domain JM955_RS09150 PF04397 LytTr DNA-binding domain JM955_RS09155 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JM955_RS09155 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JM955_RS09160 PF13673 Acetyltransferase (GNAT) domain JM955_RS09170 PF01979 Amidohydrolase family JM955_RS09190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS09230 PF13302 Acetyltransferase (GNAT) domain JM955_RS09235 PF00486 Transcriptional regulatory protein, C terminal JM955_RS09235 PF00072 Response regulator receiver domain JM955_RS09240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS09240 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS09250 PF01566 Natural resistance-associated macrophage protein JM955_RS09255 PF12368 Rhodanase C-terminal JM955_RS09255 PF00581 Rhodanese-like domain JM955_RS09255 PF17773 UPF0176 acylphosphatase like domain JM955_RS09265 PF02558 Ketopantoate reductase PanE/ApbA JM955_RS09265 PF08546 Ketopantoate reductase PanE/ApbA C terminal JM955_RS09270 PF13520 Amino acid permease JM955_RS09285 PF05791 Bacillus haemolytic enterotoxin (HBL) JM955_RS09290 PF00754 F5/8 type C domain JM955_RS09290 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase JM955_RS09290 PF13088 BNR repeat-like domain JM955_RS09295 PF02073 Thermophilic metalloprotease (M29) JM955_RS09310 PF00583 Acetyltransferase (GNAT) family JM955_RS09315 PF01906 Putative heavy-metal-binding JM955_RS09325 PF00440 Bacterial regulatory proteins, tetR family JM955_RS09330 PF04198 Putative sugar-binding domain JM955_RS09335 PF01791 DeoC/LacD family aldolase JM955_RS09340 PF07662 Na+ dependent nucleoside transporter C-terminus JM955_RS09340 PF01773 Na+ dependent nucleoside transporter N-terminus JM955_RS09345 PF00591 Glycosyl transferase family, a/b domain JM955_RS09345 PF02885 Glycosyl transferase family, helical bundle domain JM955_RS09345 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JM955_RS09350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JM955_RS09355 PF07301 Protein of unknown function (DUF1453) JM955_RS09360 PF05979 Bacterial protein of unknown function (DUF896) JM955_RS09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS09375 PF03466 LysR substrate binding domain JM955_RS09390 PF05195 Aminopeptidase P, N-terminal domain JM955_RS09390 PF00557 Metallopeptidase family M24 JM955_RS09400 PF07732 Multicopper oxidase JM955_RS09400 PF07731 Multicopper oxidase JM955_RS09400 PF00394 Multicopper oxidase JM955_RS09410 PF13342 C-terminal repeat of topoisomerase JM955_RS09410 PF01751 Toprim domain JM955_RS09410 PF01131 DNA topoisomerase JM955_RS09410 PF01396 Topoisomerase DNA binding C4 zinc finger JM955_RS09425 PF02525 Flavodoxin-like fold JM955_RS09430 PF05525 Branched-chain amino acid transport protein JM955_RS09435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS09440 PF05425 Copper resistance protein D JM955_RS09440 PF04234 CopC domain JM955_RS09440 PF13115 YtkA-like JM955_RS09445 PF07987 Domain of unkown function (DUF1775) JM955_RS09450 PF00892 EamA-like transporter family JM955_RS09455 PF03466 LysR substrate binding domain JM955_RS09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS09460 PF02082 Transcriptional regulator JM955_RS09465 PF01323 DSBA-like thioredoxin domain JM955_RS09470 PF00881 Nitroreductase family JM955_RS09475 PF01425 Amidase JM955_RS09480 PF01594 AI-2E family transporter JM955_RS09485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JM955_RS09485 PF00056 lactate/malate dehydrogenase, NAD binding domain JM955_RS09490 PF01593 Flavin containing amine oxidoreductase JM955_RS09495 PF07683 Cobalamin synthesis protein cobW C-terminal domain JM955_RS09495 PF02492 CobW/HypB/UreG, nucleotide-binding domain JM955_RS09505 PF00005 ABC transporter JM955_RS09505 PF12399 Branched-chain amino acid ATP-binding cassette transporter JM955_RS09510 PF00005 ABC transporter JM955_RS09515 PF02653 Branched-chain amino acid transport system / permease component JM955_RS09525 PF03466 LysR substrate binding domain JM955_RS09525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS09535 PF14552 Tautomerase enzyme JM955_RS09545 PF01047 MarR family JM955_RS09555 PF01654 Cytochrome bd terminal oxidase subunit I JM955_RS09560 PF02322 Cytochrome bd terminal oxidase subunit II JM955_RS09565 PF00005 ABC transporter JM955_RS09565 PF00664 ABC transporter transmembrane region JM955_RS09570 PF00664 ABC transporter transmembrane region JM955_RS09570 PF00005 ABC transporter JM955_RS09580 PF00535 Glycosyl transferase family 2 JM955_RS09585 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JM955_RS09590 PF00132 Bacterial transferase hexapeptide (six repeats) JM955_RS09615 PF02016 LD-carboxypeptidase N-terminal domain JM955_RS09615 PF17676 LD-carboxypeptidase C-terminal domain JM955_RS09620 PF00768 D-alanyl-D-alanine carboxypeptidase JM955_RS09620 PF07943 Penicillin-binding protein 5, C-terminal domain JM955_RS09635 PF00877 NlpC/P60 family JM955_RS09635 PF01476 LysM domain JM955_RS09645 PF00664 ABC transporter transmembrane region JM955_RS09645 PF00005 ABC transporter JM955_RS09650 PF00486 Transcriptional regulatory protein, C terminal JM955_RS09650 PF00072 Response regulator receiver domain JM955_RS09655 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS09655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS09655 PF16736 Single Cache-like JM955_RS09655 PF00989 PAS fold JM955_RS09665 PF00106 short chain dehydrogenase JM955_RS09670 PF01596 O-methyltransferase JM955_RS09675 PF04439 Streptomycin adenylyltransferase JM955_RS09680 PF01522 Polysaccharide deacetylase JM955_RS09700 PF00742 Homoserine dehydrogenase JM955_RS09700 PF01842 ACT domain JM955_RS09700 PF03447 Homoserine dehydrogenase, NAD binding domain JM955_RS09705 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS09710 PF00288 GHMP kinases N terminal domain JM955_RS09710 PF08544 GHMP kinases C terminal JM955_RS09725 PF03816 Cell envelope-related transcriptional attenuator domain JM955_RS09735 PF00486 Transcriptional regulatory protein, C terminal JM955_RS09735 PF00072 Response regulator receiver domain JM955_RS09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS09740 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS09740 PF00989 PAS fold JM955_RS09740 PF16736 Single Cache-like JM955_RS09745 PF01522 Polysaccharide deacetylase JM955_RS09755 PF02308 MgtC family JM955_RS09760 PF00583 Acetyltransferase (GNAT) family JM955_RS09765 PF04183 IucA / IucC family JM955_RS09765 PF06276 Ferric iron reductase FhuF-like transporter JM955_RS09770 PF06276 Ferric iron reductase FhuF-like transporter JM955_RS09770 PF04183 IucA / IucC family JM955_RS09775 PF13193 AMP-binding enzyme C-terminal domain JM955_RS09775 PF00501 AMP-binding enzyme JM955_RS09790 PF01261 Xylose isomerase-like TIM barrel JM955_RS09795 PF00269 Small, acid-soluble spore proteins, alpha/beta type JM955_RS09800 PF07690 Major Facilitator Superfamily JM955_RS09805 PF01810 LysE type translocator JM955_RS09810 PF00392 Bacterial regulatory proteins, gntR family JM955_RS09810 PF00155 Aminotransferase class I and II JM955_RS09820 PF01734 Patatin-like phospholipase JM955_RS09845 PF13344 Haloacid dehalogenase-like hydrolase JM955_RS09845 PF00293 NUDIX domain JM955_RS09850 PF02540 NAD synthase JM955_RS09855 PF02687 FtsX-like permease family JM955_RS09860 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JM955_RS09860 PF18277 AbrB C-terminal domain JM955_RS09865 PF00082 Subtilase family JM955_RS09870 PF01022 Bacterial regulatory protein, arsR family JM955_RS09875 PF00248 Aldo/keto reductase family JM955_RS09900 PF03193 RsgA GTPase JM955_RS09905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS09905 PF00672 HAMP domain JM955_RS09905 PF02743 Cache domain JM955_RS09925 PF00210 Ferritin-like domain JM955_RS09940 PF00296 Luciferase-like monooxygenase JM955_RS09950 PF01593 Flavin containing amine oxidoreductase JM955_RS09955 PF13302 Acetyltransferase (GNAT) domain JM955_RS09960 PF00248 Aldo/keto reductase family JM955_RS09965 PF07683 Cobalamin synthesis protein cobW C-terminal domain JM955_RS09965 PF02492 CobW/HypB/UreG, nucleotide-binding domain JM955_RS09970 PF00583 Acetyltransferase (GNAT) family JM955_RS09975 PF01297 Zinc-uptake complex component A periplasmic JM955_RS09985 PF13460 NAD(P)H-binding JM955_RS09990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JM955_RS09995 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JM955_RS09995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JM955_RS10005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS10010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS10020 PF00300 Histidine phosphatase superfamily (branch 1) JM955_RS10030 PF08757 CotH kinase protein JM955_RS10035 PF00293 NUDIX domain JM955_RS10040 PF09335 SNARE associated Golgi protein JM955_RS10045 PF14667 Polysaccharide biosynthesis C-terminal domain JM955_RS10045 PF01943 Polysaccharide biosynthesis protein JM955_RS10055 PF03773 Predicted permease JM955_RS10060 PF09323 Domain of unknown function (DUF1980) JM955_RS10065 PF03061 Thioesterase superfamily JM955_RS10075 PF13396 Phospholipase_D-nuclease N-terminal JM955_RS10075 PF13091 PLD-like domain JM955_RS10090 PF13460 NAD(P)H-binding JM955_RS10095 PF04306 Protein of unknown function (DUF456) JM955_RS10100 PF01595 Cyclin M transmembrane N-terminal domain JM955_RS10100 PF03471 Transporter associated domain JM955_RS10100 PF00571 CBS domain JM955_RS10115 PF05525 Branched-chain amino acid transport protein JM955_RS10120 PF01588 Putative tRNA binding domain JM955_RS10140 PF07454 Stage II sporulation protein P (SpoIIP) JM955_RS10150 PF02557 D-alanyl-D-alanine carboxypeptidase JM955_RS10160 PF01425 Amidase JM955_RS10165 PF07690 Major Facilitator Superfamily JM955_RS10180 PF01145 SPFH domain / Band 7 family JM955_RS10185 PF07454 Stage II sporulation protein P (SpoIIP) JM955_RS10200 PF01047 MarR family JM955_RS10205 PF07690 Major Facilitator Superfamily JM955_RS10215 PF00842 Alanine racemase, C-terminal domain JM955_RS10215 PF01168 Alanine racemase, N-terminal domain JM955_RS10220 PF13847 Methyltransferase domain JM955_RS10235 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JM955_RS10240 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JM955_RS10240 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS10245 PF00155 Aminotransferase class I and II JM955_RS10245 PF00392 Bacterial regulatory proteins, gntR family JM955_RS10275 PF00583 Acetyltransferase (GNAT) family JM955_RS10325 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JM955_RS10350 PF01209 ubiE/COQ5 methyltransferase family JM955_RS10355 PF01268 Formate--tetrahydrofolate ligase JM955_RS10365 PF00270 DEAD/DEAH box helicase JM955_RS10365 PF00271 Helicase conserved C-terminal domain JM955_RS10370 PF01261 Xylose isomerase-like TIM barrel JM955_RS10375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS10385 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS10385 PF00107 Zinc-binding dehydrogenase JM955_RS10390 PF08281 Sigma-70, region 4 JM955_RS10390 PF04542 Sigma-70 region 2 JM955_RS10405 PF00258 Flavodoxin JM955_RS10405 PF01613 Flavin reductase like domain JM955_RS10415 PF00255 Glutathione peroxidase JM955_RS10420 PF01841 Transglutaminase-like superfamily JM955_RS10420 PF13559 Domain of unknown function (DUF4129) JM955_RS10420 PF11992 Domain of unknown function (DUF3488) JM955_RS10425 PF01882 Protein of unknown function DUF58 JM955_RS10430 PF07726 ATPase family associated with various cellular activities (AAA) JM955_RS10430 PF17863 AAA lid domain JM955_RS10435 PF14710 Respiratory nitrate reductase alpha N-terminal JM955_RS10435 PF01568 Molydopterin dinucleotide binding domain JM955_RS10435 PF00384 Molybdopterin oxidoreductase JM955_RS10440 PF14711 Respiratory nitrate reductase beta C-terminal JM955_RS10440 PF13247 4Fe-4S dicluster domain JM955_RS10445 PF02613 Nitrate reductase delta subunit JM955_RS10450 PF02665 Nitrate reductase gamma subunit JM955_RS10455 PF00027 Cyclic nucleotide-binding domain JM955_RS10455 PF00325 Bacterial regulatory proteins, crp family JM955_RS10460 PF04055 Radical SAM superfamily JM955_RS10460 PF06463 Molybdenum Cofactor Synthesis C JM955_RS10465 PF00899 ThiF family JM955_RS10470 PF03453 MoeA N-terminal region (domain I and II) JM955_RS10470 PF00994 Probable molybdopterin binding domain JM955_RS10470 PF03454 MoeA C-terminal region (domain IV) JM955_RS10475 PF02391 MoaE protein JM955_RS10485 PF07690 Major Facilitator Superfamily JM955_RS10505 PF01903 CbiX JM955_RS10510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JM955_RS10515 PF00355 Rieske [2Fe-2S] domain JM955_RS10520 PF04324 BFD-like [2Fe-2S] binding domain JM955_RS10520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JM955_RS10520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JM955_RS10520 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS10520 PF18267 Rubredoxin NAD+ reductase C-terminal domain JM955_RS10525 PF01814 Hemerythrin HHE cation binding domain JM955_RS10525 PF04405 Domain of Unknown function (DUF542) JM955_RS10560 PF04232 Stage V sporulation protein S (SpoVS) JM955_RS10565 PF18593 CdiI immunity protein JM955_RS10580 PF01966 HD domain JM955_RS10585 PF12848 ABC transporter JM955_RS10585 PF16326 ABC transporter C-terminal domain JM955_RS10585 PF00005 ABC transporter JM955_RS10600 PF00436 Single-strand binding protein family JM955_RS10610 PF13769 Virulence factor JM955_RS10610 PF08712 Scaffold protein Nfu/NifU N terminal JM955_RS10620 PF06491 Disulphide isomerase JM955_RS10625 PF04445 Putative SAM-dependent methyltransferase JM955_RS10630 PF00750 tRNA synthetases class I (R) JM955_RS10630 PF05746 DALR anticodon binding domain JM955_RS10630 PF03485 Arginyl tRNA synthetase N terminal domain JM955_RS10645 PF00133 tRNA synthetases class I (I, L, M and V) JM955_RS10645 PF08264 Anticodon-binding domain of tRNA JM955_RS10670 PF08245 Mur ligase middle domain JM955_RS10670 PF02875 Mur ligase family, glutamate ligase domain JM955_RS10670 PF01225 Mur ligase family, catalytic domain JM955_RS10675 PF01336 OB-fold nucleic acid binding domain JM955_RS10675 PF00152 tRNA synthetases class II (D, K and N) JM955_RS10695 PF01580 FtsK/SpoIIIE family JM955_RS10695 PF12538 DNA transporter JM955_RS10800 PF00209 Sodium:neurotransmitter symporter family JM955_RS10815 PF10997 Alternate to MurJ JM955_RS10820 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS10830 PF00465 Iron-containing alcohol dehydrogenase JM955_RS10835 PF01177 Asp/Glu/Hydantoin racemase JM955_RS10840 PF01980 tRNA-methyltransferase O JM955_RS10845 PF00583 Acetyltransferase (GNAT) family JM955_RS10850 PF11188 Protein of unknown function (DUF2975) JM955_RS10855 PF13443 Cro/C1-type HTH DNA-binding domain JM955_RS10860 PF08645 Polynucleotide kinase 3 phosphatase JM955_RS10870 PF00005 ABC transporter JM955_RS10875 PF05975 Bacterial ABC transporter protein EcsB JM955_RS10880 PF14005 YpjP-like protein JM955_RS10885 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS10900 PF00144 Beta-lactamase JM955_RS10900 PF07930 D-aminopeptidase, domain B JM955_RS10905 PF00303 Thymidylate synthase JM955_RS10910 PF00186 Dihydrofolate reductase JM955_RS10915 PF00905 Penicillin binding protein transpeptidase domain JM955_RS10915 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS10915 PF05223 NTF2-like N-terminal transpeptidase domain JM955_RS10920 PF02525 Flavodoxin-like fold JM955_RS10925 PF01553 Acyltransferase JM955_RS10930 PF03006 Haemolysin-III related JM955_RS10935 PF02416 mttA/Hcf106 family JM955_RS10940 PF00902 Sec-independent protein translocase protein (TatC) JM955_RS10950 PF02645 Uncharacterised protein, DegV family COG1307 JM955_RS10960 PF02630 SCO1/SenC JM955_RS10965 PF00011 Hsp20/alpha crystallin family JM955_RS10970 PF13537 Glutamine amidotransferase domain JM955_RS10970 PF00733 Asparagine synthase JM955_RS10985 PF01520 N-acetylmuramoyl-L-alanine amidase JM955_RS10985 PF05036 Sporulation related domain JM955_RS10990 PF01497 Periplasmic binding protein JM955_RS10995 PF01063 Amino-transferase class IV JM955_RS11000 PF00881 Nitroreductase family JM955_RS11015 PF00857 Isochorismatase family JM955_RS11025 PF00924 Mechanosensitive ion channel JM955_RS11030 PF13185 GAF domain JM955_RS11030 PF07730 Histidine kinase JM955_RS11035 PF00072 Response regulator receiver domain JM955_RS11035 PF00196 Bacterial regulatory proteins, luxR family JM955_RS11040 PF01380 SIS domain JM955_RS11040 PF01418 Helix-turn-helix domain, rpiR family JM955_RS11045 PF02567 Phenazine biosynthesis-like protein JM955_RS11050 PF00107 Zinc-binding dehydrogenase JM955_RS11050 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS11065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JM955_RS11065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JM955_RS11070 PF02447 GntP family permease JM955_RS11075 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JM955_RS11075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JM955_RS11080 PF10924 Protein of unknown function (DUF2711) JM955_RS11095 PF03358 NADPH-dependent FMN reductase JM955_RS11110 PF00571 CBS domain JM955_RS11110 PF00005 ABC transporter JM955_RS11115 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS11120 PF13520 Amino acid permease JM955_RS11150 PF01595 Cyclin M transmembrane N-terminal domain JM955_RS11150 PF00571 CBS domain JM955_RS11150 PF03471 Transporter associated domain JM955_RS11155 PF00171 Aldehyde dehydrogenase family JM955_RS11160 PF07997 Protein of unknown function (DUF1694) JM955_RS11165 PF09385 Histidine kinase N terminal JM955_RS11175 PF00202 Aminotransferase class-III JM955_RS11180 PF01144 Coenzyme A transferase JM955_RS11185 PF01144 Coenzyme A transferase JM955_RS11190 PF01546 Peptidase family M20/M25/M40 JM955_RS11190 PF07687 Peptidase dimerisation domain JM955_RS11195 PF00583 Acetyltransferase (GNAT) family JM955_RS11200 PF13426 PAS domain JM955_RS11200 PF00158 Sigma-54 interaction domain JM955_RS11200 PF02954 Bacterial regulatory protein, Fis family JM955_RS11205 PF12544 Lysine-2,3-aminomutase JM955_RS11210 PF14122 YokU-like protein, putative antitoxin JM955_RS11215 PF06855 YozE SAM-like fold JM955_RS11230 PF14162 YozD-like protein JM955_RS11240 PF00069 Protein kinase domain JM955_RS11240 PF08239 Bacterial SH3 domain JM955_RS11250 PF01569 PAP2 superfamily JM955_RS11255 PF01545 Cation efflux family JM955_RS11255 PF16916 Dimerisation domain of Zinc Transporter JM955_RS11260 PF00085 Thioredoxin JM955_RS11350 PF10676 Spore germination protein gerPA/gerPF JM955_RS11365 PF00106 short chain dehydrogenase JM955_RS11385 PF00912 Transglycosylase JM955_RS11385 PF00905 Penicillin binding protein transpeptidase domain JM955_RS11395 PF07690 Major Facilitator Superfamily JM955_RS11400 PF01521 Iron-sulphur cluster biosynthesis JM955_RS11405 PF00285 Citrate synthase, C-terminal domain JM955_RS11410 PF03972 MmgE/PrpD family JM955_RS11420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM955_RS11420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM955_RS11420 PF02770 Acyl-CoA dehydrogenase, middle domain JM955_RS11425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JM955_RS11425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JM955_RS11430 PF00171 Aldehyde dehydrogenase family JM955_RS11435 PF01810 LysE type translocator JM955_RS11440 PF00378 Enoyl-CoA hydratase/isomerase JM955_RS11455 PF12320 Type 5 capsule protein repressor C-terminal domain JM955_RS11455 PF00149 Calcineurin-like phosphoesterase JM955_RS11460 PF13476 AAA domain JM955_RS11470 PF01022 Bacterial regulatory protein, arsR family JM955_RS11480 PF07690 Major Facilitator Superfamily JM955_RS11485 PF00106 short chain dehydrogenase JM955_RS11490 PF00425 chorismate binding enzyme JM955_RS11495 PF00501 AMP-binding enzyme JM955_RS11495 PF13193 AMP-binding enzyme C-terminal domain JM955_RS11500 PF00857 Isochorismatase family JM955_RS11500 PF00550 Phosphopantetheine attachment site JM955_RS11505 PF00975 Thioesterase domain JM955_RS11505 PF00550 Phosphopantetheine attachment site JM955_RS11505 PF00501 AMP-binding enzyme JM955_RS11505 PF13193 AMP-binding enzyme C-terminal domain JM955_RS11505 PF00668 Condensation domain JM955_RS11510 PF03621 MbtH-like protein JM955_RS11515 PF07690 Major Facilitator Superfamily JM955_RS11530 PF00216 Bacterial DNA-binding protein JM955_RS11540 PF05163 DinB family JM955_RS11545 PF00082 Subtilase family JM955_RS11550 PF01235 Sodium:alanine symporter family JM955_RS11570 PF01479 S4 domain JM955_RS11570 PF00849 RNA pseudouridylate synthase JM955_RS11575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JM955_RS11575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JM955_RS11575 PF03129 Anticodon binding domain JM955_RS11575 PF02824 TGS domain JM955_RS11580 PF00005 ABC transporter JM955_RS11595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JM955_RS11595 PF00205 Thiamine pyrophosphate enzyme, central domain JM955_RS11595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JM955_RS11630 PF00027 Cyclic nucleotide-binding domain JM955_RS11645 PF16123 Hydroxyacylglutathione hydrolase C-terminus JM955_RS11645 PF00753 Metallo-beta-lactamase superfamily JM955_RS11655 PF03176 MMPL family JM955_RS11665 PF00302 Chloramphenicol acetyltransferase JM955_RS11685 PF00583 Acetyltransferase (GNAT) family JM955_RS11710 PF01593 Flavin containing amine oxidoreductase JM955_RS11720 PF13302 Acetyltransferase (GNAT) domain JM955_RS11730 PF00313 'Cold-shock' DNA-binding domain JM955_RS11750 PF03466 LysR substrate binding domain JM955_RS11750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS11755 PF01118 Semialdehyde dehydrogenase, NAD binding domain JM955_RS11755 PF02774 Semialdehyde dehydrogenase, dimerisation domain JM955_RS11775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS11775 PF03466 LysR substrate binding domain JM955_RS11780 PF03475 3-alpha domain JM955_RS11780 PF03473 MOSC domain JM955_RS11795 PF00005 ABC transporter JM955_RS11795 PF00664 ABC transporter transmembrane region JM955_RS11800 PF00005 ABC transporter JM955_RS11800 PF00664 ABC transporter transmembrane region JM955_RS11815 PF14659 Phage integrase, N-terminal SAM-like domain JM955_RS11815 PF00589 Phage integrase family JM955_RS11825 PF01381 Helix-turn-helix JM955_RS11840 PF01381 Helix-turn-helix JM955_RS11880 PF18277 AbrB C-terminal domain JM955_RS11880 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JM955_RS11925 PF00589 Phage integrase family JM955_RS11960 PF03354 Phage Terminase JM955_RS11970 PF00574 Clp protease JM955_RS12040 PF01510 N-acetylmuramoyl-L-alanine amidase JM955_RS12065 PF01810 LysE type translocator JM955_RS12070 PF01381 Helix-turn-helix JM955_RS12070 PF07883 Cupin domain JM955_RS12100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JM955_RS12100 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS12105 PF12680 SnoaL-like domain JM955_RS12105 PF08281 Sigma-70, region 4 JM955_RS12105 PF04542 Sigma-70 region 2 JM955_RS12130 PF02638 Glycosyl hydrolase-like 10 JM955_RS12140 PF02378 Phosphotransferase system, EIIC JM955_RS12150 PF03702 Anhydro-N-acetylmuramic acid kinase JM955_RS12155 PF01869 BadF/BadG/BcrA/BcrD ATPase family JM955_RS12160 PF02660 Glycerol-3-phosphate acyltransferase JM955_RS12165 PF00266 Aminotransferase class-V JM955_RS12170 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS12175 PF01047 MarR family JM955_RS12180 PF07690 Major Facilitator Superfamily JM955_RS12190 PF00753 Metallo-beta-lactamase superfamily JM955_RS12190 PF16123 Hydroxyacylglutathione hydrolase C-terminus JM955_RS12195 PF00271 Helicase conserved C-terminal domain JM955_RS12195 PF00270 DEAD/DEAH box helicase JM955_RS12205 PF17932 Tetracyclin repressor-like, C-terminal domain JM955_RS12205 PF00440 Bacterial regulatory proteins, tetR family JM955_RS12255 PF09680 Family of unknown function JM955_RS12315 PF03848 Tellurite resistance protein TehB JM955_RS12315 PF09313 Domain of unknown function (DUF1971) JM955_RS12325 PF08241 Methyltransferase domain JM955_RS12330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JM955_RS12330 PF00205 Thiamine pyrophosphate enzyme, central domain JM955_RS12330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JM955_RS12335 PF01047 MarR family JM955_RS12340 PF00300 Histidine phosphatase superfamily (branch 1) JM955_RS12345 PF14171 Toxin SpoIISA, type II toxin-antitoxin system JM955_RS12385 PF07687 Peptidase dimerisation domain JM955_RS12385 PF01546 Peptidase family M20/M25/M40 JM955_RS12400 PF04371 Porphyromonas-type peptidyl-arginine deiminase JM955_RS12405 PF00196 Bacterial regulatory proteins, luxR family JM955_RS12405 PF00072 Response regulator receiver domain JM955_RS12415 PF18277 AbrB C-terminal domain JM955_RS12415 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JM955_RS12425 PF01925 Sulfite exporter TauE/SafE JM955_RS12430 PF00132 Bacterial transferase hexapeptide (six repeats) JM955_RS12435 PF07943 Penicillin-binding protein 5, C-terminal domain JM955_RS12435 PF00768 D-alanyl-D-alanine carboxypeptidase JM955_RS12450 PF07690 Major Facilitator Superfamily JM955_RS12455 PF00668 Condensation domain JM955_RS12455 PF13193 AMP-binding enzyme C-terminal domain JM955_RS12455 PF00501 AMP-binding enzyme JM955_RS12455 PF00550 Phosphopantetheine attachment site JM955_RS12460 PF13193 AMP-binding enzyme C-terminal domain JM955_RS12460 PF07993 Male sterility protein JM955_RS12460 PF00668 Condensation domain JM955_RS12460 PF00501 AMP-binding enzyme JM955_RS12460 PF00550 Phosphopantetheine attachment site JM955_RS12465 PF00550 Phosphopantetheine attachment site JM955_RS12465 PF13193 AMP-binding enzyme C-terminal domain JM955_RS12465 PF00668 Condensation domain JM955_RS12465 PF00501 AMP-binding enzyme JM955_RS12470 PF01648 4'-phosphopantetheinyl transferase superfamily JM955_RS12475 PF00975 Thioesterase domain JM955_RS12485 PF01235 Sodium:alanine symporter family JM955_RS12490 PF04960 Glutaminase JM955_RS12495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS12500 PF08664 YcbB domain JM955_RS12500 PF00072 Response regulator receiver domain JM955_RS12505 PF03323 Bacillus/Clostridium GerA spore germination protein JM955_RS12510 PF03845 Spore germination protein JM955_RS12515 PF05504 Spore germination B3/ GerAC like, C-terminal JM955_RS12520 PF14748 Pyrroline-5-carboxylate reductase dimerisation JM955_RS12520 PF03807 NADP oxidoreductase coenzyme F420-dependent JM955_RS12525 PF13520 Amino acid permease JM955_RS12530 PF12826 Helix-hairpin-helix motif JM955_RS12530 PF01541 GIY-YIG catalytic domain JM955_RS12530 PF08459 UvrC Helix-hairpin-helix N-terminal JM955_RS12530 PF02151 UvrB/uvrC motif JM955_RS12535 PF00269 Small, acid-soluble spore proteins, alpha/beta type JM955_RS12545 PF17853 GGDEF-like domain JM955_RS12545 PF12833 Helix-turn-helix domain JM955_RS12560 PF05791 Bacillus haemolytic enterotoxin (HBL) JM955_RS12565 PF05791 Bacillus haemolytic enterotoxin (HBL) JM955_RS12570 PF13426 PAS domain JM955_RS12570 PF00989 PAS fold JM955_RS12570 PF13188 PAS domain JM955_RS12570 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS12570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS12575 PF03323 Bacillus/Clostridium GerA spore germination protein JM955_RS12580 PF03845 Spore germination protein JM955_RS12585 PF05504 Spore germination B3/ GerAC like, C-terminal JM955_RS12620 PF13302 Acetyltransferase (GNAT) domain JM955_RS12630 PF01520 N-acetylmuramoyl-L-alanine amidase JM955_RS12630 PF00395 S-layer homology domain JM955_RS12635 PF01381 Helix-turn-helix JM955_RS12650 PF01522 Polysaccharide deacetylase JM955_RS12655 PF00440 Bacterial regulatory proteins, tetR family JM955_RS12655 PF17932 Tetracyclin repressor-like, C-terminal domain JM955_RS12660 PF13537 Glutamine amidotransferase domain JM955_RS12660 PF00733 Asparagine synthase JM955_RS12665 PF13492 GAF domain JM955_RS12665 PF07730 Histidine kinase JM955_RS12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS12670 PF00196 Bacterial regulatory proteins, luxR family JM955_RS12670 PF00072 Response regulator receiver domain JM955_RS12675 PF00082 Subtilase family JM955_RS12675 PF02225 PA domain JM955_RS12675 PF05922 Peptidase inhibitor I9 JM955_RS12675 PF13860 FlgD Ig-like domain JM955_RS12690 PF00269 Small, acid-soluble spore proteins, alpha/beta type JM955_RS12725 PF05223 NTF2-like N-terminal transpeptidase domain JM955_RS12725 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS12725 PF00905 Penicillin binding protein transpeptidase domain JM955_RS12730 PF08281 Sigma-70, region 4 JM955_RS12730 PF04542 Sigma-70 region 2 JM955_RS12740 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS12740 PF00905 Penicillin binding protein transpeptidase domain JM955_RS12745 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS12745 PF00905 Penicillin binding protein transpeptidase domain JM955_RS12755 PF00149 Calcineurin-like phosphoesterase JM955_RS12765 PF00005 ABC transporter JM955_RS12775 PF00440 Bacterial regulatory proteins, tetR family JM955_RS12775 PF08359 YsiA-like protein, C-terminal region JM955_RS12790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM955_RS12790 PF02770 Acyl-CoA dehydrogenase, middle domain JM955_RS12790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM955_RS12795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JM955_RS12795 PF00289 Biotin carboxylase, N-terminal domain JM955_RS12795 PF02785 Biotin carboxylase C-terminal domain JM955_RS12800 PF00364 Biotin-requiring enzyme JM955_RS12805 PF00682 HMGL-like JM955_RS12810 PF00378 Enoyl-CoA hydratase/isomerase JM955_RS12815 PF01039 Carboxyl transferase domain JM955_RS12820 PF13193 AMP-binding enzyme C-terminal domain JM955_RS12820 PF00501 AMP-binding enzyme JM955_RS12820 PF16177 Acetyl-coenzyme A synthetase N-terminus JM955_RS12855 PF07943 Penicillin-binding protein 5, C-terminal domain JM955_RS12855 PF00768 D-alanyl-D-alanine carboxypeptidase JM955_RS12860 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS12865 PF00486 Transcriptional regulatory protein, C terminal JM955_RS12865 PF00072 Response regulator receiver domain JM955_RS12870 PF01966 HD domain JM955_RS12875 PF13021 Domain of unknown function (DUF3885) JM955_RS12880 PF01048 Phosphorylase superfamily JM955_RS12895 PF03413 Peptidase propeptide and YPEB domain JM955_RS12895 PF01447 Thermolysin metallopeptidase, catalytic domain JM955_RS12895 PF07504 Fungalysin/Thermolysin Propeptide Motif JM955_RS12895 PF02868 Thermolysin metallopeptidase, alpha-helical domain JM955_RS12900 PF12833 Helix-turn-helix domain JM955_RS12900 PF17853 GGDEF-like domain JM955_RS12915 PF18002 T6 antigen Ig like domain JM955_RS12915 PF00746 LPXTG cell wall anchor motif JM955_RS12915 PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain JM955_RS12915 PF17802 Prealbumin-like fold domain JM955_RS12930 PF17760 UvrA interaction domain JM955_RS12930 PF17755 UvrA DNA-binding domain JM955_RS12930 PF00005 ABC transporter JM955_RS12935 PF00376 MerR family regulatory protein JM955_RS12935 PF09278 MerR, DNA binding JM955_RS12940 PF07690 Major Facilitator Superfamily JM955_RS12950 PF01638 HxlR-like helix-turn-helix JM955_RS12975 PF01636 Phosphotransferase enzyme family JM955_RS12980 PF12833 Helix-turn-helix domain JM955_RS12995 PF00155 Aminotransferase class I and II JM955_RS12995 PF00392 Bacterial regulatory proteins, gntR family JM955_RS13005 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JM955_RS13005 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JM955_RS13020 PF00107 Zinc-binding dehydrogenase JM955_RS13020 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS13030 PF04239 Protein of unknown function (DUF421) JM955_RS13040 PF01965 DJ-1/PfpI family JM955_RS13050 PF08450 SMP-30/Gluconolactonase/LRE-like region JM955_RS13060 PF01921 tRNA synthetases class I (K) JM955_RS13065 PF07486 Cell Wall Hydrolase JM955_RS13075 PF00486 Transcriptional regulatory protein, C terminal JM955_RS13075 PF00072 Response regulator receiver domain JM955_RS13080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS13090 PF12848 ABC transporter JM955_RS13090 PF00005 ABC transporter JM955_RS13105 PF00005 ABC transporter JM955_RS13110 PF02687 FtsX-like permease family JM955_RS13130 PF00742 Homoserine dehydrogenase JM955_RS13130 PF03447 Homoserine dehydrogenase, NAD binding domain JM955_RS13130 PF01842 ACT domain JM955_RS13135 PF00155 Aminotransferase class I and II JM955_RS13135 PF00392 Bacterial regulatory proteins, gntR family JM955_RS13140 PF07478 D-ala D-ala ligase C-terminus JM955_RS13140 PF01820 D-ala D-ala ligase N-terminus JM955_RS13145 PF03070 TENA/THI-4/PQQC family JM955_RS13175 PF14659 Phage integrase, N-terminal SAM-like domain JM955_RS13175 PF00589 Phage integrase family JM955_RS13205 PF01381 Helix-turn-helix JM955_RS13235 PF07319 Primosomal protein DnaI N-terminus JM955_RS13235 PF01695 IstB-like ATP binding protein JM955_RS13255 PF18277 AbrB C-terminal domain JM955_RS13255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JM955_RS13285 PF01569 PAP2 superfamily JM955_RS13335 PF00589 Phage integrase family JM955_RS13365 PF10668 Phage terminase small subunit JM955_RS13380 PF00574 Clp protease JM955_RS13445 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JM955_RS13445 PF13457 GW (Gly-Tryp) dipeptide domain JM955_RS13500 PF00067 Cytochrome P450 JM955_RS13510 PF00132 Bacterial transferase hexapeptide (six repeats) JM955_RS13515 PF07561 Domain of Unknown Function (DUF1540) JM955_RS13525 PF00067 Cytochrome P450 JM955_RS13540 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS13540 PF00989 PAS fold JM955_RS13540 PF13188 PAS domain JM955_RS13540 PF13426 PAS domain JM955_RS13540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS13545 PF00905 Penicillin binding protein transpeptidase domain JM955_RS13545 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS13550 PF10502 Signal peptidase, peptidase S26 JM955_RS13555 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JM955_RS13560 PF01177 Asp/Glu/Hydantoin racemase JM955_RS13565 PF07155 ECF-type riboflavin transporter, S component JM955_RS13570 PF12558 ATP-binding cassette cobalt transporter JM955_RS13570 PF00005 ABC transporter JM955_RS13585 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS13585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS13620 PF00293 NUDIX domain JM955_RS13620 PF13344 Haloacid dehalogenase-like hydrolase JM955_RS13640 PF04229 GrpB protein JM955_RS13645 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS13645 PF00107 Zinc-binding dehydrogenase JM955_RS13650 PF01569 PAP2 superfamily JM955_RS13655 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS13655 PF03793 PASTA domain JM955_RS13655 PF00905 Penicillin binding protein transpeptidase domain JM955_RS13665 PF00144 Beta-lactamase JM955_RS13665 PF11954 Domain of unknown function (DUF3471) JM955_RS13705 PF13411 MerR HTH family regulatory protein JM955_RS13705 PF07739 TipAS antibiotic-recognition domain JM955_RS13710 PF07690 Major Facilitator Superfamily JM955_RS13725 PF03009 Glycerophosphoryl diester phosphodiesterase family JM955_RS13745 PF00155 Aminotransferase class I and II JM955_RS13745 PF00392 Bacterial regulatory proteins, gntR family JM955_RS13750 PF00892 EamA-like transporter family JM955_RS13755 PF01270 Glycosyl hydrolases family 8 JM955_RS13760 PF01156 Inosine-uridine preferring nucleoside hydrolase JM955_RS13775 PF13344 Haloacid dehalogenase-like hydrolase JM955_RS13775 PF00293 NUDIX domain JM955_RS13785 PF00144 Beta-lactamase JM955_RS13795 PF07690 Major Facilitator Superfamily JM955_RS13805 PF09297 NADH pyrophosphatase zinc ribbon domain JM955_RS13805 PF00293 NUDIX domain JM955_RS13810 PF02767 DNA polymerase III beta subunit, central domain JM955_RS13810 PF02768 DNA polymerase III beta subunit, C-terminal domain JM955_RS13810 PF00712 DNA polymerase III beta subunit, N-terminal domain JM955_RS13820 PF12706 Beta-lactamase superfamily domain JM955_RS13845 PF09234 Domain of unknown function (DUF1963) JM955_RS13865 PF01734 Patatin-like phospholipase JM955_RS13870 PF08000 Bacterial PH domain JM955_RS13880 PF12867 DinB superfamily JM955_RS13895 PF02673 Bacitracin resistance protein BacA JM955_RS13905 PF01541 GIY-YIG catalytic domain JM955_RS13945 PF01266 FAD dependent oxidoreductase JM955_RS13970 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS13975 PF00072 Response regulator receiver domain JM955_RS13975 PF00486 Transcriptional regulatory protein, C terminal JM955_RS13980 PF16736 Single Cache-like JM955_RS13980 PF00989 PAS fold JM955_RS13980 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS14000 PF01037 Lrp/AsnC ligand binding domain JM955_RS14015 PF00005 ABC transporter JM955_RS14020 PF02687 FtsX-like permease family JM955_RS14020 PF12704 MacB-like periplasmic core domain JM955_RS14030 PF07859 alpha/beta hydrolase fold JM955_RS14035 PF00282 Pyridoxal-dependent decarboxylase conserved domain JM955_RS14040 PF13193 AMP-binding enzyme C-terminal domain JM955_RS14040 PF00501 AMP-binding enzyme JM955_RS14040 PF00550 Phosphopantetheine attachment site JM955_RS14040 PF00668 Condensation domain JM955_RS14050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JM955_RS14050 PF03714 Bacterial pullanase-associated domain JM955_RS14050 PF00128 Alpha amylase, catalytic domain JM955_RS14055 PF07504 Fungalysin/Thermolysin Propeptide Motif JM955_RS14055 PF02868 Thermolysin metallopeptidase, alpha-helical domain JM955_RS14055 PF01447 Thermolysin metallopeptidase, catalytic domain JM955_RS14055 PF03413 Peptidase propeptide and YPEB domain JM955_RS14060 PF02872 5'-nucleotidase, C-terminal domain JM955_RS14060 PF00149 Calcineurin-like phosphoesterase JM955_RS14075 PF00344 SecY translocase JM955_RS14080 PF02909 Tetracyclin repressor-like, C-terminal domain JM955_RS14080 PF00440 Bacterial regulatory proteins, tetR family JM955_RS14085 PF01494 FAD binding domain JM955_RS14090 PF00892 EamA-like transporter family JM955_RS14095 PF00392 Bacterial regulatory proteins, gntR family JM955_RS14095 PF00155 Aminotransferase class I and II JM955_RS14100 PF00107 Zinc-binding dehydrogenase JM955_RS14100 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS14105 PF00561 alpha/beta hydrolase fold JM955_RS14130 PF06081 Aromatic acid exporter family member 1 JM955_RS14145 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JM955_RS14150 PF03413 Peptidase propeptide and YPEB domain JM955_RS14150 PF14620 YpeB sporulation JM955_RS14155 PF01471 Putative peptidoglycan binding domain JM955_RS14155 PF07486 Cell Wall Hydrolase JM955_RS14175 PF03301 Tryptophan 2,3-dioxygenase JM955_RS14180 PF04199 Putative cyclase JM955_RS14185 PF00266 Aminotransferase class-V JM955_RS14190 PF08359 YsiA-like protein, C-terminal region JM955_RS14190 PF00440 Bacterial regulatory proteins, tetR family JM955_RS14195 PF00293 NUDIX domain JM955_RS14195 PF13344 Haloacid dehalogenase-like hydrolase JM955_RS14220 PF02954 Bacterial regulatory protein, Fis family JM955_RS14220 PF01590 GAF domain JM955_RS14220 PF00158 Sigma-54 interaction domain JM955_RS14230 PF13302 Acetyltransferase (GNAT) domain JM955_RS14235 PF00455 DeoR C terminal sensor domain JM955_RS14235 PF08220 DeoR-like helix-turn-helix domain JM955_RS14250 PF02082 Transcriptional regulator JM955_RS14265 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS14265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JM955_RS14270 PF02817 e3 binding domain JM955_RS14270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JM955_RS14270 PF00364 Biotin-requiring enzyme JM955_RS14275 PF02780 Transketolase, C-terminal domain JM955_RS14275 PF02779 Transketolase, pyrimidine binding domain JM955_RS14280 PF00676 Dehydrogenase E1 component JM955_RS14295 PF00106 short chain dehydrogenase JM955_RS14300 PF13673 Acetyltransferase (GNAT) domain JM955_RS14300 PF04229 GrpB protein JM955_RS14340 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS14345 PF00571 CBS domain JM955_RS14345 PF00005 ABC transporter JM955_RS14350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JM955_RS14355 PF00574 Clp protease JM955_RS14370 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JM955_RS14375 PF13673 Acetyltransferase (GNAT) domain JM955_RS14380 PF18416 N-acetylglucosamine binding protein domain 2 JM955_RS14380 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JM955_RS14385 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JM955_RS14390 PF03781 Sulfatase-modifying factor enzyme 1 JM955_RS14400 PF10990 Protein of unknown function (DUF2809) JM955_RS14410 PF04237 YjbR JM955_RS14460 PF00583 Acetyltransferase (GNAT) family JM955_RS14465 PF13538 UvrD-like helicase C-terminal domain JM955_RS14480 PF00270 DEAD/DEAH box helicase JM955_RS14480 PF00271 Helicase conserved C-terminal domain JM955_RS14480 PF09382 RQC domain JM955_RS14480 PF00570 HRDC domain JM955_RS14480 PF16124 RecQ zinc-binding JM955_RS14535 PF01368 DHH family JM955_RS14535 PF02833 DHHA2 domain JM955_RS14540 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JM955_RS14540 PF18416 N-acetylglucosamine binding protein domain 2 JM955_RS14555 PF02627 Carboxymuconolactone decarboxylase family JM955_RS14560 PF01235 Sodium:alanine symporter family JM955_RS14565 PF00171 Aldehyde dehydrogenase family JM955_RS14570 PF00701 Dihydrodipicolinate synthetase family JM955_RS14575 PF05544 Proline racemase JM955_RS14580 PF05544 Proline racemase JM955_RS14585 PF01266 FAD dependent oxidoreductase JM955_RS14590 PF13188 PAS domain JM955_RS14590 PF00158 Sigma-54 interaction domain JM955_RS14590 PF02954 Bacterial regulatory protein, Fis family JM955_RS14595 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS14595 PF04324 BFD-like [2Fe-2S] binding domain JM955_RS14605 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS14605 PF04324 BFD-like [2Fe-2S] binding domain JM955_RS14620 PF08876 Domain of unknown function (DUF1836) JM955_RS14625 PF09335 SNARE associated Golgi protein JM955_RS14635 PF04914 DltD protein JM955_RS14640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS14645 PF00877 NlpC/P60 family JM955_RS14645 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JM955_RS14650 PF13378 Enolase C-terminal domain-like JM955_RS14650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JM955_RS14665 PF00248 Aldo/keto reductase family JM955_RS14670 PF12833 Helix-turn-helix domain JM955_RS14670 PF01965 DJ-1/PfpI family JM955_RS14695 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JM955_RS14695 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JM955_RS14705 PF00672 HAMP domain JM955_RS14705 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS14705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS14710 PF00072 Response regulator receiver domain JM955_RS14710 PF00486 Transcriptional regulatory protein, C terminal JM955_RS14735 PF01048 Phosphorylase superfamily JM955_RS14745 PF03808 Glycosyl transferase WecB/TagA/CpsF family JM955_RS14750 PF08439 Oligopeptidase F JM955_RS14750 PF01432 Peptidase family M3 JM955_RS14755 PF02645 Uncharacterised protein, DegV family COG1307 JM955_RS14760 PF07552 Spore Coat Protein X and V domain JM955_RS14795 PF07690 Major Facilitator Superfamily JM955_RS14805 PF04519 Polymer-forming cytoskeletal JM955_RS14810 PF13171 Protein of unknown function (DUF4004) JM955_RS14815 PF12793 Sugar transport-related sRNA regulator N-term JM955_RS14815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS14820 PF07690 Major Facilitator Superfamily JM955_RS14845 PF04226 Transglycosylase associated protein JM955_RS14860 PF08241 Methyltransferase domain JM955_RS14895 PF00155 Aminotransferase class I and II JM955_RS14900 PF07977 FabA-like domain JM955_RS14905 PF03630 Fumble JM955_RS14925 PF00005 ABC transporter JM955_RS14980 PF01594 AI-2E family transporter JM955_RS14990 PF00296 Luciferase-like monooxygenase JM955_RS14995 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS15000 PF09084 NMT1/THI5 like JM955_RS15005 PF00005 ABC transporter JM955_RS15040 PF02522 Aminoglycoside 3-N-acetyltransferase JM955_RS15050 PF13536 Putative multidrug resistance efflux transporter JM955_RS15080 PF08713 DNA alkylation repair enzyme JM955_RS15085 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS15090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS15100 PF01965 DJ-1/PfpI family JM955_RS15105 PF01522 Polysaccharide deacetylase JM955_RS15110 PF03611 PTS system sugar-specific permease component JM955_RS15120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JM955_RS15125 PF03741 Integral membrane protein TerC family JM955_RS15130 PF00884 Sulfatase JM955_RS15135 PF12848 ABC transporter JM955_RS15135 PF00005 ABC transporter JM955_RS15140 PF03176 MMPL family JM955_RS15145 PF16295 Tetracyclin repressor-like, C-terminal domain JM955_RS15145 PF00440 Bacterial regulatory proteins, tetR family JM955_RS15150 PF00293 NUDIX domain JM955_RS15160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JM955_RS15165 PF02153 Prephenate dehydrogenase JM955_RS15165 PF01842 ACT domain JM955_RS15170 PF00155 Aminotransferase class I and II JM955_RS15175 PF01264 Chorismate synthase JM955_RS15180 PF00793 DAHP synthetase I family JM955_RS15180 PF01817 Chorismate mutase type II JM955_RS15200 PF01636 Phosphotransferase enzyme family JM955_RS15225 PF06725 3D domain JM955_RS15225 PF01476 LysM domain JM955_RS15240 PF08031 Berberine and berberine like JM955_RS15240 PF01565 FAD binding domain JM955_RS15260 PF06039 Malate:quinone oxidoreductase (Mqo) JM955_RS15265 PF13407 Periplasmic binding protein domain JM955_RS15270 PF02653 Branched-chain amino acid transport system / permease component JM955_RS15275 PF02653 Branched-chain amino acid transport system / permease component JM955_RS15280 PF00005 ABC transporter JM955_RS15285 PF00325 Bacterial regulatory proteins, crp family JM955_RS15285 PF04198 Putative sugar-binding domain JM955_RS15290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JM955_RS15290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JM955_RS15300 PF01791 DeoC/LacD family aldolase JM955_RS15310 PF03992 Antibiotic biosynthesis monooxygenase JM955_RS15325 PF07662 Na+ dependent nucleoside transporter C-terminus JM955_RS15325 PF01773 Na+ dependent nucleoside transporter N-terminus JM955_RS15330 PF00171 Aldehyde dehydrogenase family JM955_RS15335 PF00696 Amino acid kinase family JM955_RS15335 PF01472 PUA domain JM955_RS15340 PF14748 Pyrroline-5-carboxylate reductase dimerisation JM955_RS15340 PF03807 NADP oxidoreductase coenzyme F420-dependent JM955_RS15345 PF01546 Peptidase family M20/M25/M40 JM955_RS15350 PF01614 Bacterial transcriptional regulator JM955_RS15350 PF09339 IclR helix-turn-helix domain JM955_RS15355 PF00324 Amino acid permease JM955_RS15370 PF00487 Fatty acid desaturase JM955_RS15375 PF05547 Immune inhibitor A peptidase M6 JM955_RS15380 PF04294 VanW like protein JM955_RS15385 PF00245 Alkaline phosphatase JM955_RS15390 PF11188 Protein of unknown function (DUF2975) JM955_RS15395 PF13443 Cro/C1-type HTH DNA-binding domain JM955_RS15420 PF13302 Acetyltransferase (GNAT) domain JM955_RS15425 PF12681 Glyoxalase-like domain JM955_RS15445 PF17863 AAA lid domain JM955_RS15445 PF07726 ATPase family associated with various cellular activities (AAA) JM955_RS15460 PF07690 Major Facilitator Superfamily JM955_RS15465 PF00202 Aminotransferase class-III JM955_RS15470 PF00199 Catalase JM955_RS15470 PF06628 Catalase-related immune-responsive JM955_RS15475 PF18496 Collagenase G catalytic helper subdomain JM955_RS15475 PF08453 Peptidase family M9 N-terminal JM955_RS15475 PF01752 Collagenase JM955_RS15475 PF04151 Bacterial pre-peptidase C-terminal domain JM955_RS15485 PF13382 Adenine deaminase C-terminal domain JM955_RS15485 PF01979 Amidohydrolase family JM955_RS15490 PF00144 Beta-lactamase JM955_RS15505 PF00881 Nitroreductase family JM955_RS15510 PF01047 MarR family JM955_RS15515 PF00679 Elongation factor G C-terminus JM955_RS15515 PF14492 Elongation Factor G, domain II JM955_RS15515 PF00009 Elongation factor Tu GTP binding domain JM955_RS15515 PF03764 Elongation factor G, domain IV JM955_RS15540 PF00005 ABC transporter JM955_RS15545 PF00392 Bacterial regulatory proteins, gntR family JM955_RS15560 PF16363 GDP-mannose 4,6 dehydratase JM955_RS15575 PF12833 Helix-turn-helix domain JM955_RS15580 PF00583 Acetyltransferase (GNAT) family JM955_RS15595 PF00892 EamA-like transporter family JM955_RS15600 PF00155 Aminotransferase class I and II JM955_RS15600 PF00392 Bacterial regulatory proteins, gntR family JM955_RS15605 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JM955_RS15610 PF13031 Protein of unknown function (DUF3892) JM955_RS15640 PF01925 Sulfite exporter TauE/SafE JM955_RS15650 PF00324 Amino acid permease JM955_RS15660 PF08713 DNA alkylation repair enzyme JM955_RS15665 PF10898 Protein of unknown function (DUF2716) JM955_RS15675 PF00293 NUDIX domain JM955_RS15680 PF04989 Cephalosporin hydroxylase JM955_RS15685 PF10502 Signal peptidase, peptidase S26 JM955_RS15690 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS15690 PF00905 Penicillin binding protein transpeptidase domain JM955_RS15695 PF02146 Sir2 family JM955_RS15700 PF01470 Pyroglutamyl peptidase JM955_RS15715 PF03746 LamB/YcsF family JM955_RS15720 PF02626 Carboxyltransferase domain, subdomain A and B JM955_RS15725 PF02682 Carboxyltransferase domain, subdomain C and D JM955_RS15730 PF01614 Bacterial transcriptional regulator JM955_RS15730 PF09339 IclR helix-turn-helix domain JM955_RS15740 PF10502 Signal peptidase, peptidase S26 JM955_RS15745 PF03932 CutC family JM955_RS15760 PF02770 Acyl-CoA dehydrogenase, middle domain JM955_RS15760 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JM955_RS15760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM955_RS15775 PF07670 Nucleoside recognition JM955_RS15790 PF10903 Protein of unknown function (DUF2691) JM955_RS15795 PF02915 Rubrerythrin JM955_RS15810 PF00440 Bacterial regulatory proteins, tetR family JM955_RS15815 PF05547 Immune inhibitor A peptidase M6 JM955_RS15820 PF00391 PEP-utilising enzyme, mobile domain JM955_RS15820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JM955_RS15825 PF00753 Metallo-beta-lactamase superfamily JM955_RS15830 PF10710 Protein of unknown function (DUF2512) JM955_RS15835 PF11553 Protein of unknown function (DUF3231) JM955_RS15840 PF00269 Small, acid-soluble spore proteins, alpha/beta type JM955_RS15845 PF00107 Zinc-binding dehydrogenase JM955_RS15845 PF13823 Alcohol dehydrogenase GroES-associated JM955_RS15845 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS15855 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JM955_RS15855 PF00753 Metallo-beta-lactamase superfamily JM955_RS15855 PF17770 Ribonuclease J C-terminal domain JM955_RS15865 PF11799 impB/mucB/samB family C-terminal domain JM955_RS15865 PF11798 IMS family HHH motif JM955_RS15865 PF00817 impB/mucB/samB family JM955_RS15870 PF00144 Beta-lactamase JM955_RS15880 PF02872 5'-nucleotidase, C-terminal domain JM955_RS15880 PF00149 Calcineurin-like phosphoesterase JM955_RS15880 PF17936 Bacterial Ig domain JM955_RS15885 PF00561 alpha/beta hydrolase fold JM955_RS15890 PF00857 Isochorismatase family JM955_RS15910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS15910 PF03466 LysR substrate binding domain JM955_RS15915 PF01047 MarR family JM955_RS15920 PF01544 CorA-like Mg2+ transporter protein JM955_RS15955 PF03073 TspO/MBR family JM955_RS15960 PF00875 DNA photolyase JM955_RS15960 PF03441 FAD binding domain of DNA photolyase JM955_RS15980 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JM955_RS15985 PF00361 Proton-conducting membrane transporter JM955_RS15985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JM955_RS15990 PF10057 Uncharacterized conserved protein (DUF2294) JM955_RS15995 PF01522 Polysaccharide deacetylase JM955_RS16000 PF00583 Acetyltransferase (GNAT) family JM955_RS16005 PF01040 UbiA prenyltransferase family JM955_RS16010 PF01965 DJ-1/PfpI family JM955_RS16010 PF12833 Helix-turn-helix domain JM955_RS16020 PF01451 Low molecular weight phosphotyrosine protein phosphatase JM955_RS16025 PF01758 Sodium Bile acid symporter family JM955_RS16030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS16035 PF01022 Bacterial regulatory protein, arsR family JM955_RS16050 PF02805 Metal binding domain of Ada JM955_RS16050 PF12833 Helix-turn-helix domain JM955_RS16065 PF18665 Tetracyclin repressor-like, C-terminal domain JM955_RS16065 PF00440 Bacterial regulatory proteins, tetR family JM955_RS16070 PF07690 Major Facilitator Superfamily JM955_RS16075 PF00440 Bacterial regulatory proteins, tetR family JM955_RS16085 PF01037 Lrp/AsnC ligand binding domain JM955_RS16100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS16120 PF00144 Beta-lactamase JM955_RS16125 PF00144 Beta-lactamase JM955_RS16135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS16135 PF03466 LysR substrate binding domain JM955_RS16140 PF00892 EamA-like transporter family JM955_RS16165 PF00005 ABC transporter JM955_RS16170 PF00392 Bacterial regulatory proteins, gntR family JM955_RS16180 PF08803 Putative mono-oxygenase ydhR JM955_RS16190 PF12802 MarR family JM955_RS16215 PF00072 Response regulator receiver domain JM955_RS16215 PF00486 Transcriptional regulatory protein, C terminal JM955_RS16220 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS16220 PF00672 HAMP domain JM955_RS16250 PF00196 Bacterial regulatory proteins, luxR family JM955_RS16250 PF00072 Response regulator receiver domain JM955_RS16260 PF00005 ABC transporter JM955_RS16265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS16265 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS16270 PF00072 Response regulator receiver domain JM955_RS16270 PF00486 Transcriptional regulatory protein, C terminal JM955_RS16290 PF00175 Oxidoreductase NAD-binding domain JM955_RS16290 PF00258 Flavodoxin JM955_RS16290 PF00067 Cytochrome P450 JM955_RS16290 PF00667 FAD binding domain JM955_RS16295 PF07690 Major Facilitator Superfamily JM955_RS16305 PF00326 Prolyl oligopeptidase family JM955_RS16315 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS16325 PF01139 tRNA-splicing ligase RtcB JM955_RS16335 PF04072 Leucine carboxyl methyltransferase JM955_RS16350 PF00005 ABC transporter JM955_RS16355 PF02687 FtsX-like permease family JM955_RS16375 PF00672 HAMP domain JM955_RS16375 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS16380 PF00486 Transcriptional regulatory protein, C terminal JM955_RS16380 PF00072 Response regulator receiver domain JM955_RS16385 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JM955_RS16385 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS16395 PF02016 LD-carboxypeptidase N-terminal domain JM955_RS16395 PF17676 LD-carboxypeptidase C-terminal domain JM955_RS16415 PF01842 ACT domain JM955_RS16415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JM955_RS16415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JM955_RS16420 PF00266 Aminotransferase class-V JM955_RS16435 PF07883 Cupin domain JM955_RS16440 PF12833 Helix-turn-helix domain JM955_RS16440 PF01497 Periplasmic binding protein JM955_RS16445 PF01804 Penicillin amidase JM955_RS16460 PF01510 N-acetylmuramoyl-L-alanine amidase JM955_RS16460 PF01471 Putative peptidoglycan binding domain JM955_RS16460 PF01476 LysM domain JM955_RS16465 PF08361 MAATS-type transcriptional repressor, C-terminal region JM955_RS16465 PF00440 Bacterial regulatory proteins, tetR family JM955_RS16470 PF07690 Major Facilitator Superfamily JM955_RS16490 PF02557 D-alanyl-D-alanine carboxypeptidase JM955_RS16495 PF09587 Bacterial capsule synthesis protein PGA_cap JM955_RS16500 PF14044 NETI protein JM955_RS16505 PF07690 Major Facilitator Superfamily JM955_RS16515 PF12697 Alpha/beta hydrolase family JM955_RS16520 PF01047 MarR family JM955_RS16525 PF07690 Major Facilitator Superfamily JM955_RS16535 PF12679 ABC-2 family transporter protein JM955_RS16540 PF00005 ABC transporter JM955_RS16540 PF13732 Domain of unknown function (DUF4162) JM955_RS16545 PF13396 Phospholipase_D-nuclease N-terminal JM955_RS16555 PF17314 Family of unknown function (DUF5360) JM955_RS16560 PF00893 Small Multidrug Resistance protein JM955_RS16565 PF00440 Bacterial regulatory proteins, tetR family JM955_RS16575 PF00144 Beta-lactamase JM955_RS16585 PF02667 Short chain fatty acid transporter JM955_RS16595 PF02525 Flavodoxin-like fold JM955_RS16615 PF14256 YwiC-like protein JM955_RS16625 PF00005 ABC transporter JM955_RS16630 PF02361 Cobalt transport protein JM955_RS16645 PF03737 Aldolase/RraA JM955_RS16650 PF03606 C4-dicarboxylate anaerobic carrier JM955_RS16655 PF04231 Endonuclease I JM955_RS16685 PF04073 Aminoacyl-tRNA editing domain JM955_RS16690 PF13393 Histidyl-tRNA synthetase JM955_RS16690 PF03129 Anticodon binding domain JM955_RS16705 PF01638 HxlR-like helix-turn-helix JM955_RS16710 PF00881 Nitroreductase family JM955_RS16720 PF00391 PEP-utilising enzyme, mobile domain JM955_RS16720 PF00224 Pyruvate kinase, barrel domain JM955_RS16720 PF02887 Pyruvate kinase, alpha/beta domain JM955_RS16750 PF00005 ABC transporter JM955_RS16780 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS16790 PF13350 Tyrosine phosphatase family JM955_RS16815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS16820 PF00480 ROK family JM955_RS16830 PF12464 Maltose acetyltransferase JM955_RS16830 PF14602 Hexapeptide repeat of succinyl-transferase JM955_RS16835 PF00579 tRNA synthetases class I (W and Y) JM955_RS16840 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JM955_RS16840 PF13288 DXP reductoisomerase C-terminal domain JM955_RS16840 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JM955_RS16845 PF00392 Bacterial regulatory proteins, gntR family JM955_RS16845 PF00155 Aminotransferase class I and II JM955_RS16850 PF00117 Glutamine amidotransferase class-I JM955_RS16860 PF01594 AI-2E family transporter JM955_RS16885 PF08003 Protein of unknown function (DUF1698) JM955_RS16895 PF07690 Major Facilitator Superfamily JM955_RS16900 PF01609 Transposase DDE domain JM955_RS16905 PF07690 Major Facilitator Superfamily JM955_RS16925 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS16935 PF03471 Transporter associated domain JM955_RS16935 PF01595 Cyclin M transmembrane N-terminal domain JM955_RS16935 PF00571 CBS domain JM955_RS16940 PF13411 MerR HTH family regulatory protein JM955_RS16950 PF00483 Nucleotidyl transferase JM955_RS16955 PF16363 GDP-mannose 4,6 dehydratase JM955_RS16960 PF08421 Putative zinc binding domain JM955_RS16960 PF08484 C-methyltransferase C-terminal domain JM955_RS16965 PF01370 NAD dependent epimerase/dehydratase family JM955_RS16980 PF00892 EamA-like transporter family JM955_RS16990 PF00805 Pentapeptide repeats (8 copies) JM955_RS16995 PF06906 Protein of unknown function (DUF1272) JM955_RS17000 PF10282 Lactonase, 7-bladed beta-propeller JM955_RS17005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JM955_RS17005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JM955_RS17010 PF02447 GntP family permease JM955_RS17015 PF00923 Transaldolase/Fructose-6-phosphate aldolase JM955_RS17020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JM955_RS17020 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JM955_RS17025 PF00456 Transketolase, thiamine diphosphate binding domain JM955_RS17025 PF02779 Transketolase, pyrimidine binding domain JM955_RS17025 PF02780 Transketolase, C-terminal domain JM955_RS17030 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JM955_RS17030 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JM955_RS17035 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JM955_RS17035 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JM955_RS17040 PF00550 Phosphopantetheine attachment site JM955_RS17040 PF16197 Ketoacyl-synthetase C-terminal extension JM955_RS17040 PF08659 KR domain JM955_RS17040 PF02801 Beta-ketoacyl synthase, C-terminal domain JM955_RS17040 PF00109 Beta-ketoacyl synthase, N-terminal domain JM955_RS17040 PF00107 Zinc-binding dehydrogenase JM955_RS17040 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS17040 PF00698 Acyl transferase domain JM955_RS17040 PF14765 Polyketide synthase dehydratase JM955_RS17050 PF03928 Haem-degrading JM955_RS17090 PF03960 ArsC family JM955_RS17095 PF07702 UTRA domain JM955_RS17095 PF00392 Bacterial regulatory proteins, gntR family JM955_RS17100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JM955_RS17100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JM955_RS17140 PF02567 Phenazine biosynthesis-like protein JM955_RS17150 PF13302 Acetyltransferase (GNAT) domain JM955_RS17155 PF00501 AMP-binding enzyme JM955_RS17155 PF13193 AMP-binding enzyme C-terminal domain JM955_RS17160 PF02525 Flavodoxin-like fold JM955_RS17165 PF01638 HxlR-like helix-turn-helix JM955_RS17175 PF01494 FAD binding domain JM955_RS17185 PF01022 Bacterial regulatory protein, arsR family JM955_RS17195 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain JM955_RS17195 PF01522 Polysaccharide deacetylase JM955_RS17200 PF12791 Anti-sigma factor N-terminus JM955_RS17205 PF04542 Sigma-70 region 2 JM955_RS17215 PF00535 Glycosyl transferase family 2 JM955_RS17215 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JM955_RS17240 PF01810 LysE type translocator JM955_RS17260 PF01061 ABC-2 type transporter JM955_RS17265 PF00005 ABC transporter JM955_RS17265 PF13732 Domain of unknown function (DUF4162) JM955_RS17285 PF03063 Prismane/CO dehydrogenase family JM955_RS17295 PF01471 Putative peptidoglycan binding domain JM955_RS17295 PF01183 Glycosyl hydrolases family 25 JM955_RS17320 PF00144 Beta-lactamase JM955_RS17360 PF00753 Metallo-beta-lactamase superfamily JM955_RS17365 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS17365 PF00107 Zinc-binding dehydrogenase JM955_RS17370 PF00324 Amino acid permease JM955_RS17375 PF07690 Major Facilitator Superfamily JM955_RS17400 PF02585 GlcNAc-PI de-N-acetylase JM955_RS17405 PF08830 Protein of unknown function (DUF1806) JM955_RS17410 PF03600 Citrate transporter JM955_RS17425 PF01497 Periplasmic binding protein JM955_RS17430 PF01032 FecCD transport family JM955_RS17435 PF01032 FecCD transport family JM955_RS17440 PF05675 Protein of unknown function (DUF817) JM955_RS17445 PF13170 Protein of unknown function (DUF4003) JM955_RS17460 PF13302 Acetyltransferase (GNAT) domain JM955_RS17465 PF10901 Protein of unknown function (DUF2690) JM955_RS17475 PF03466 LysR substrate binding domain JM955_RS17475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS17480 PF00107 Zinc-binding dehydrogenase JM955_RS17480 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS17495 PF01713 Smr domain JM955_RS17495 PF00488 MutS domain V JM955_RS17505 PF09154 Domain of unknown function (DUF1939) JM955_RS17505 PF00128 Alpha amylase, catalytic domain JM955_RS17510 PF00797 N-acetyltransferase JM955_RS17515 PF01432 Peptidase family M3 JM955_RS17515 PF08439 Oligopeptidase F JM955_RS17520 PF04371 Porphyromonas-type peptidyl-arginine deiminase JM955_RS17540 PF06146 Phosphate-starvation-inducible E JM955_RS17545 PF04371 Porphyromonas-type peptidyl-arginine deiminase JM955_RS17550 PF00144 Beta-lactamase JM955_RS17565 PF03466 LysR substrate binding domain JM955_RS17565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS17575 PF03009 Glycerophosphoryl diester phosphodiesterase family JM955_RS17615 PF01494 FAD binding domain JM955_RS17620 PF01022 Bacterial regulatory protein, arsR family JM955_RS17625 PF08240 Alcohol dehydrogenase GroES-like domain JM955_RS17625 PF00107 Zinc-binding dehydrogenase JM955_RS17630 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JM955_RS17635 PF18801 response regulator aspartate phosphatase H, N terminal JM955_RS17645 PF04299 Putative FMN-binding domain JM955_RS17650 PF04229 GrpB protein JM955_RS17665 PF01565 FAD binding domain JM955_RS17665 PF02913 FAD linked oxidases, C-terminal domain JM955_RS17680 PF00581 Rhodanese-like domain JM955_RS17680 PF00753 Metallo-beta-lactamase superfamily JM955_RS17685 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS17700 PF03009 Glycerophosphoryl diester phosphodiesterase family JM955_RS17715 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS17720 PF00072 Response regulator receiver domain JM955_RS17720 PF00486 Transcriptional regulatory protein, C terminal JM955_RS17725 PF01526 Tn3 transposase DDE domain JM955_RS17725 PF13700 Domain of unknown function (DUF4158) JM955_RS17730 PF00144 Beta-lactamase JM955_RS17740 PF00388 Phosphatidylinositol-specific phospholipase C, X domain JM955_RS17745 PF18416 N-acetylglucosamine binding protein domain 2 JM955_RS17745 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JM955_RS17755 PF03323 Bacillus/Clostridium GerA spore germination protein JM955_RS17775 PF00483 Nucleotidyl transferase JM955_RS17785 PF16363 GDP-mannose 4,6 dehydratase JM955_RS17790 PF16363 GDP-mannose 4,6 dehydratase JM955_RS17795 PF01385 Probable transposase JM955_RS17795 PF07282 Putative transposase DNA-binding domain JM955_RS17795 PF12323 Helix-turn-helix domain JM955_RS17800 PF18801 response regulator aspartate phosphatase H, N terminal JM955_RS17810 PF00672 HAMP domain JM955_RS17810 PF02743 Cache domain JM955_RS17810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS17825 PF00082 Subtilase family JM955_RS17835 PF00553 Cellulose binding domain JM955_RS17835 PF00041 Fibronectin type III domain JM955_RS17835 PF00704 Glycosyl hydrolases family 18 JM955_RS17850 PF00563 EAL domain JM955_RS17850 PF03707 Bacterial signalling protein N terminal repeat JM955_RS17850 PF00990 Diguanylate cyclase, GGDEF domain JM955_RS17855 PF16326 ABC transporter C-terminal domain JM955_RS17855 PF00005 ABC transporter JM955_RS17860 PF00440 Bacterial regulatory proteins, tetR family JM955_RS17865 PF07968 Leukocidin/Hemolysin toxin family JM955_RS17870 PF00395 S-layer homology domain JM955_RS17870 PF01520 N-acetylmuramoyl-L-alanine amidase JM955_RS17875 PF02557 D-alanyl-D-alanine carboxypeptidase JM955_RS17900 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS17900 PF00989 PAS fold JM955_RS17900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS17905 PF18496 Collagenase G catalytic helper subdomain JM955_RS17905 PF08453 Peptidase family M9 N-terminal JM955_RS17905 PF01752 Collagenase JM955_RS17910 PF02308 MgtC family JM955_RS17920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS17925 PF04294 VanW like protein JM955_RS17935 PF13039 Protein of unknown function (DUF3900) JM955_RS17935 PF13037 Domain of unknown function (DUF3898) JM955_RS17955 PF00313 'Cold-shock' DNA-binding domain JM955_RS17965 PF00258 Flavodoxin JM955_RS17975 PF00293 NUDIX domain JM955_RS17985 PF00132 Bacterial transferase hexapeptide (six repeats) JM955_RS17995 PF00106 short chain dehydrogenase JM955_RS18005 PF14698 Argininosuccinate lyase C-terminal JM955_RS18005 PF00206 Lyase JM955_RS18015 PF01156 Inosine-uridine preferring nucleoside hydrolase JM955_RS18020 PF00474 Sodium:solute symporter family JM955_RS18030 PF00171 Aldehyde dehydrogenase family JM955_RS18040 PF14151 YfhD-like protein JM955_RS18045 PF13243 Squalene-hopene cyclase C-terminal domain JM955_RS18045 PF13249 Squalene-hopene cyclase N-terminal domain JM955_RS18050 PF02681 Divergent PAP2 family JM955_RS18055 PF00892 EamA-like transporter family JM955_RS18060 PF06961 Protein of unknown function (DUF1294) JM955_RS18075 PF10609 NUBPL iron-transfer P-loop NTPase JM955_RS18085 PF02391 MoaE protein JM955_RS18090 PF03454 MoeA C-terminal region (domain IV) JM955_RS18090 PF03453 MoeA N-terminal region (domain I and II) JM955_RS18090 PF00994 Probable molybdopterin binding domain JM955_RS18095 PF00899 ThiF family JM955_RS18100 PF01226 Formate/nitrite transporter JM955_RS18105 PF04055 Radical SAM superfamily JM955_RS18105 PF06463 Molybdenum Cofactor Synthesis C JM955_RS18110 PF02634 FdhD/NarQ family JM955_RS18115 PF10057 Uncharacterized conserved protein (DUF2294) JM955_RS18120 PF07849 Protein of unknown function (DUF1641) JM955_RS18125 PF00037 4Fe-4S binding domain JM955_RS18125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JM955_RS18125 PF00384 Molybdopterin oxidoreductase JM955_RS18125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JM955_RS18125 PF01568 Molydopterin dinucleotide binding domain JM955_RS18130 PF03323 Bacillus/Clostridium GerA spore germination protein JM955_RS18145 PF13520 Amino acid permease JM955_RS18180 PF08241 Methyltransferase domain JM955_RS18185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS18195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS18200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JM955_RS18205 PF03816 Cell envelope-related transcriptional attenuator domain JM955_RS18215 PF04542 Sigma-70 region 2 JM955_RS18215 PF08281 Sigma-70, region 4 JM955_RS18225 PF13732 Domain of unknown function (DUF4162) JM955_RS18225 PF00005 ABC transporter JM955_RS18245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JM955_RS18245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JM955_RS18250 PF00521 DNA gyrase/topoisomerase IV, subunit A JM955_RS18250 PF03989 DNA gyrase C-terminal domain, beta-propeller JM955_RS18255 PF00204 DNA gyrase B JM955_RS18255 PF01751 Toprim domain JM955_RS18255 PF00986 DNA gyrase B subunit, carboxyl terminus JM955_RS18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS18260 PF13380 CoA binding domain JM955_RS18265 PF13180 PDZ domain JM955_RS18270 PF00072 Response regulator receiver domain JM955_RS18270 PF00486 Transcriptional regulatory protein, C terminal JM955_RS18275 PF04055 Radical SAM superfamily JM955_RS18280 PF03477 ATP cone domain JM955_RS18280 PF13597 Anaerobic ribonucleoside-triphosphate reductase JM955_RS18285 PF02660 Glycerol-3-phosphate acyltransferase JM955_RS18290 PF01521 Iron-sulphur cluster biosynthesis JM955_RS18295 PF03061 Thioesterase superfamily JM955_RS18300 PF00704 Glycosyl hydrolases family 18 JM955_RS18300 PF01476 LysM domain JM955_RS18305 PF08177 Small acid-soluble spore protein N family JM955_RS18310 PF13040 Fur-regulated basic protein B JM955_RS18315 PF14579 Helix-hairpin-helix motif JM955_RS18315 PF07733 Bacterial DNA polymerase III alpha NTPase domain JM955_RS18315 PF02811 PHP domain JM955_RS18315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JM955_RS18315 PF00929 Exonuclease JM955_RS18315 PF11490 DNA polymerase III polC-type N-terminus II JM955_RS18315 PF01336 OB-fold nucleic acid binding domain JM955_RS18320 PF00578 AhpC/TSA family JM955_RS18330 PF00005 ABC transporter JM955_RS18330 PF00664 ABC transporter transmembrane region JM955_RS18330 PF03412 Peptidase C39 family JM955_RS18335 PF00330 Aconitase family (aconitate hydratase) JM955_RS18335 PF00694 Aconitase C-terminal domain JM955_RS18345 PF01522 Polysaccharide deacetylase JM955_RS18355 PF08179 Small acid-soluble spore protein P family JM955_RS18365 PF07690 Major Facilitator Superfamily JM955_RS18375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JM955_RS18375 PF01411 tRNA synthetases class II (A) JM955_RS18375 PF02272 DHHA1 domain JM955_RS18380 PF00293 NUDIX domain JM955_RS18380 PF13344 Haloacid dehalogenase-like hydrolase JM955_RS18390 PF02803 Thiolase, C-terminal domain JM955_RS18390 PF00108 Thiolase, N-terminal domain JM955_RS18395 PF00501 AMP-binding enzyme JM955_RS18395 PF13193 AMP-binding enzyme C-terminal domain JM955_RS18400 PF02632 BioY family JM955_RS18405 PF13193 AMP-binding enzyme C-terminal domain JM955_RS18405 PF00501 AMP-binding enzyme JM955_RS18410 PF00082 Subtilase family JM955_RS18415 PF00672 HAMP domain JM955_RS18415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS18415 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS18415 PF13426 PAS domain JM955_RS18420 PF00486 Transcriptional regulatory protein, C terminal JM955_RS18420 PF00072 Response regulator receiver domain JM955_RS18430 PF00005 ABC transporter JM955_RS18445 PF00005 ABC transporter JM955_RS18450 PF02441 Flavoprotein JM955_RS18460 PF00005 ABC transporter JM955_RS18465 PF14028 Lantibiotic biosynthesis dehydratase C-term JM955_RS18465 PF04738 Lantibiotic dehydratase, N terminus JM955_RS18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS18500 PF05384 Sensor protein DegS JM955_RS18500 PF07730 Histidine kinase JM955_RS18505 PF00196 Bacterial regulatory proteins, luxR family JM955_RS18505 PF00072 Response regulator receiver domain JM955_RS18520 PF05532 CsbD-like JM955_RS18540 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JM955_RS18540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS18550 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS18550 PF00989 PAS fold JM955_RS18550 PF13426 PAS domain JM955_RS18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS18550 PF13188 PAS domain JM955_RS18555 PF01738 Dienelactone hydrolase family JM955_RS18560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS18565 PF00474 Sodium:solute symporter family JM955_RS18570 PF01645 Conserved region in glutamate synthase JM955_RS18575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JM955_RS18580 PF02559 CarD-like/TRCF domain JM955_RS18585 PF00491 Arginase family JM955_RS18590 PF01979 Amidohydrolase family JM955_RS18595 PF17391 Urocanase N-terminal domain JM955_RS18595 PF01175 Urocanase Rossmann-like domain JM955_RS18595 PF17392 Urocanase C-terminal domain JM955_RS18600 PF00221 Aromatic amino acid lyase JM955_RS18605 PF09021 HutP JM955_RS18610 PF01209 ubiE/COQ5 methyltransferase family JM955_RS18630 PF11084 Protein of unknown function (DUF2621) JM955_RS18635 PF07301 Protein of unknown function (DUF1453) JM955_RS18640 PF02683 Cytochrome C biogenesis protein transmembrane region JM955_RS18650 PF07687 Peptidase dimerisation domain JM955_RS18650 PF01546 Peptidase family M20/M25/M40 JM955_RS18660 PF00005 ABC transporter JM955_RS18675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS18675 PF03466 LysR substrate binding domain JM955_RS18680 PF03788 LrgA family JM955_RS18685 PF04172 LrgB-like family JM955_RS18690 PF13344 Haloacid dehalogenase-like hydrolase JM955_RS18690 PF00293 NUDIX domain JM955_RS18700 PF01925 Sulfite exporter TauE/SafE JM955_RS18720 PF08239 Bacterial SH3 domain JM955_RS18720 PF01183 Glycosyl hydrolases family 25 JM955_RS18725 PF00005 ABC transporter JM955_RS18725 PF00664 ABC transporter transmembrane region JM955_RS18730 PF00005 ABC transporter JM955_RS18730 PF00664 ABC transporter transmembrane region JM955_RS18735 PF03672 Uncharacterised protein family (UPF0154) JM955_RS18740 PF10747 Sporulation inhibitor of replication protein SirA JM955_RS18745 PF02780 Transketolase, C-terminal domain JM955_RS18745 PF02779 Transketolase, pyrimidine binding domain JM955_RS18745 PF00456 Transketolase, thiamine diphosphate binding domain JM955_RS18750 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS18755 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS18760 PF00005 ABC transporter JM955_RS18765 PF00497 Bacterial extracellular solute-binding proteins, family 3 JM955_RS18770 PF00149 Calcineurin-like phosphoesterase JM955_RS18770 PF02872 5'-nucleotidase, C-terminal domain JM955_RS18775 PF05979 Bacterial protein of unknown function (DUF896) JM955_RS18780 PF00239 Resolvase, N terminal domain JM955_RS18785 PF00717 Peptidase S24-like JM955_RS18785 PF01726 LexA DNA binding domain JM955_RS18800 PF03551 Transcriptional regulator PadR-like family JM955_RS18810 PF01471 Putative peptidoglycan binding domain JM955_RS18810 PF01510 N-acetylmuramoyl-L-alanine amidase JM955_RS18810 PF01476 LysM domain JM955_RS18845 PF01726 LexA DNA binding domain JM955_RS18845 PF00717 Peptidase S24-like JM955_RS18850 PF00120 Glutamine synthetase, catalytic domain JM955_RS18850 PF03951 Glutamine synthetase, beta-Grasp domain JM955_RS18855 PF13411 MerR HTH family regulatory protein JM955_RS18860 PF06838 Methionine gamma-lyase JM955_RS18865 PF16360 GTP-binding GTPase Middle Region JM955_RS18865 PF13167 GTP-binding GTPase N-terminal JM955_RS18865 PF01926 50S ribosome-binding GTPase JM955_RS18870 PF03458 UPF0126 domain JM955_RS18880 PF00004 ATPase family associated with various cellular activities (AAA) JM955_RS18880 PF17866 AAA lid domain JM955_RS18895 PF17209 Hfq protein JM955_RS18910 PF06725 3D domain JM955_RS18910 PF01476 LysM domain JM955_RS18915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JM955_RS18915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JM955_RS18920 PF00294 pfkB family carbohydrate kinase JM955_RS18925 PF08220 DeoR-like helix-turn-helix domain JM955_RS18925 PF00455 DeoR C terminal sensor domain JM955_RS18930 PF00465 Iron-containing alcohol dehydrogenase JM955_RS18935 PF04238 Protein of unknown function (DUF420) JM955_RS18945 PF00324 Amino acid permease JM955_RS18950 PF00704 Glycosyl hydrolases family 18 JM955_RS18950 PF00041 Fibronectin type III domain JM955_RS18955 PF00149 Calcineurin-like phosphoesterase JM955_RS18955 PF10518 TAT (twin-arginine translocation) pathway signal sequence JM955_RS18960 PF01226 Formate/nitrite transporter JM955_RS18965 PF00216 Bacterial DNA-binding protein JM955_RS18975 PF00403 Heavy-metal-associated domain JM955_RS18980 PF00403 Heavy-metal-associated domain JM955_RS18990 PF02583 Metal-sensitive transcriptional repressor JM955_RS19000 PF00756 Putative esterase JM955_RS19005 PF00005 ABC transporter JM955_RS19010 PF01032 FecCD transport family JM955_RS19015 PF01032 FecCD transport family JM955_RS19020 PF01497 Periplasmic binding protein JM955_RS19025 PF03372 Endonuclease/Exonuclease/phosphatase family JM955_RS19030 PF02805 Metal binding domain of Ada JM955_RS19030 PF12833 Helix-turn-helix domain JM955_RS19035 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JM955_RS19035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JM955_RS19040 PF00730 HhH-GPD superfamily base excision DNA repair protein JM955_RS19040 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain JM955_RS19045 PF07687 Peptidase dimerisation domain JM955_RS19045 PF01546 Peptidase family M20/M25/M40 JM955_RS19065 PF00561 alpha/beta hydrolase fold JM955_RS19070 PF00563 EAL domain JM955_RS19070 PF03707 Bacterial signalling protein N terminal repeat JM955_RS19070 PF00990 Diguanylate cyclase, GGDEF domain JM955_RS19075 PF04101 Glycosyltransferase family 28 C-terminal domain JM955_RS19075 PF03033 Glycosyltransferase family 28 N-terminal domain JM955_RS19085 PF16363 GDP-mannose 4,6 dehydratase JM955_RS19090 PF02719 Polysaccharide biosynthesis protein JM955_RS19090 PF08485 Polysaccharide biosynthesis protein C-terminal JM955_RS19100 PF10787 Uncharacterised protein from bacillus cereus group JM955_RS19105 PF04172 LrgB-like family JM955_RS19110 PF03788 LrgA family JM955_RS19115 PF00392 Bacterial regulatory proteins, gntR family JM955_RS19115 PF00155 Aminotransferase class I and II JM955_RS19125 PF07702 UTRA domain JM955_RS19125 PF00392 Bacterial regulatory proteins, gntR family JM955_RS19130 PF00232 Glycosyl hydrolase family 1 JM955_RS19135 PF00388 Phosphatidylinositol-specific phospholipase C, X domain JM955_RS19140 PF00082 Subtilase family JM955_RS19145 PF07486 Cell Wall Hydrolase JM955_RS19155 PF00884 Sulfatase JM955_RS19160 PF00350 Dynamin family JM955_RS19170 PF01119 DNA mismatch repair protein, C-terminal domain JM955_RS19170 PF08676 MutL C terminal dimerisation domain JM955_RS19175 PF01624 MutS domain I JM955_RS19175 PF05188 MutS domain II JM955_RS19175 PF05190 MutS family domain IV JM955_RS19175 PF05192 MutS domain III JM955_RS19175 PF00488 MutS domain V JM955_RS19180 PF10628 Outer spore coat protein E (CotE) JM955_RS19185 PF06133 Control of competence regulator ComK, YlbF/YmcA JM955_RS19190 PF04055 Radical SAM superfamily JM955_RS19190 PF00919 Uncharacterized protein family UPF0004 JM955_RS19190 PF01938 TRAM domain JM955_RS19195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JM955_RS19200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JM955_RS19200 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JM955_RS19200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JM955_RS19205 PF01244 Membrane dipeptidase (Peptidase family M19) JM955_RS19210 PF04232 Stage V sporulation protein S (SpoVS) JM955_RS19215 PF13277 YmdB-like protein JM955_RS19220 PF12072 Domain of unknown function (DUF3552) JM955_RS19220 PF00013 KH domain JM955_RS19220 PF01966 HD domain JM955_RS19225 PF00154 recA bacterial DNA recombination protein JM955_RS19230 PF00994 Probable molybdopterin binding domain JM955_RS19230 PF18146 Damage-inducible protein CinA KH domain JM955_RS19230 PF02464 Competence-damaged protein JM955_RS19235 PF01066 CDP-alcohol phosphatidyltransferase JM955_RS19240 PF13464 Domain of unknown function (DUF4115) JM955_RS19245 PF11868 Protein of unknown function (DUF3388) JM955_RS19250 PF11588 Protein of unknown function (DUF3243) JM955_RS19260 PF00675 Insulinase (Peptidase family M16) JM955_RS19260 PF05193 Peptidase M16 inactive domain JM955_RS19265 PF05193 Peptidase M16 inactive domain JM955_RS19270 PF02653 Branched-chain amino acid transport system / permease component JM955_RS19275 PF02653 Branched-chain amino acid transport system / permease component JM955_RS19280 PF00005 ABC transporter JM955_RS19285 PF02608 ABC transporter substrate-binding protein PnrA-like JM955_RS19290 PF07702 UTRA domain JM955_RS19290 PF00392 Bacterial regulatory proteins, gntR family JM955_RS19295 PF09397 Ftsk gamma domain JM955_RS19295 PF01580 FtsK/SpoIIIE family JM955_RS19295 PF17854 FtsK alpha domain JM955_RS19300 PF14035 YlzJ-like protein JM955_RS19305 PF00574 Clp protease JM955_RS19310 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JM955_RS19310 PF17770 Ribonuclease J C-terminal domain JM955_RS19310 PF00753 Metallo-beta-lactamase superfamily JM955_RS19315 PF00701 Dihydrodipicolinate synthetase family JM955_RS19320 PF00696 Amino acid kinase family JM955_RS19320 PF13840 ACT domain JM955_RS19325 PF01118 Semialdehyde dehydrogenase, NAD binding domain JM955_RS19325 PF02774 Semialdehyde dehydrogenase, dimerisation domain JM955_RS19330 PF02441 Flavoprotein JM955_RS19345 PF04740 LXG domain of WXG superfamily JM955_RS19345 PF14449 Pre-toxin TG JM955_RS19345 PF14431 YwqJ-like deaminase JM955_RS19360 PF00589 Phage integrase family JM955_RS19410 PF03796 DnaB-like helicase C terminal domain JM955_RS19410 PF00772 DnaB-like helicase N terminal domain JM955_RS19475 PF16924 Dipicolinate synthase subunit A N-terminal domain JM955_RS19475 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JM955_RS19480 PF05239 PRC-barrel domain JM955_RS19485 PF00675 Insulinase (Peptidase family M16) JM955_RS19485 PF05193 Peptidase M16 inactive domain JM955_RS19490 PF01522 Polysaccharide deacetylase JM955_RS19495 PF01138 3' exoribonuclease family, domain 1 JM955_RS19495 PF00575 S1 RNA binding domain JM955_RS19495 PF03725 3' exoribonuclease family, domain 2 JM955_RS19495 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JM955_RS19495 PF00013 KH domain JM955_RS19500 PF00312 Ribosomal protein S15 JM955_RS19505 PF06574 FAD synthetase JM955_RS19505 PF01687 Riboflavin kinase JM955_RS19510 PF16198 tRNA pseudouridylate synthase B C-terminal domain JM955_RS19510 PF01509 TruB family pseudouridylate synthase (N terminal domain) JM955_RS19515 PF02033 Ribosome-binding factor A JM955_RS19520 PF04456 Protein of unknown function (DUF503) JM955_RS19525 PF11987 Translation-initiation factor 2 JM955_RS19525 PF04760 Translation initiation factor IF-2, N-terminal region JM955_RS19525 PF00009 Elongation factor Tu GTP binding domain JM955_RS19530 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JM955_RS19535 PF04296 Protein of unknown function (DUF448) JM955_RS19540 PF13184 NusA-like KH domain JM955_RS19540 PF08529 NusA N-terminal domain JM955_RS19540 PF00575 S1 RNA binding domain JM955_RS19545 PF02576 RimP N-terminal domain JM955_RS19545 PF17384 RimP C-terminal SH3 domain JM955_RS19550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JM955_RS19550 PF14579 Helix-hairpin-helix motif JM955_RS19550 PF00929 Exonuclease JM955_RS19550 PF11490 DNA polymerase III polC-type N-terminus II JM955_RS19550 PF02811 PHP domain JM955_RS19550 PF14480 DNA polymerase III polC-type N-terminus I JM955_RS19550 PF07733 Bacterial DNA polymerase III alpha NTPase domain JM955_RS19555 PF04073 Aminoacyl-tRNA editing domain JM955_RS19555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JM955_RS19555 PF03129 Anticodon binding domain JM955_RS19560 PF02163 Peptidase family M50 JM955_RS19560 PF17820 PDZ domain JM955_RS19565 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JM955_RS19565 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JM955_RS19565 PF13288 DXP reductoisomerase C-terminal domain JM955_RS19575 PF01255 Putative undecaprenyl diphosphate synthase JM955_RS19580 PF01765 Ribosome recycling factor JM955_RS19585 PF00696 Amino acid kinase family JM955_RS19590 PF00889 Elongation factor TS JM955_RS19595 PF00318 Ribosomal protein S2 JM955_RS19600 PF08222 CodY helix-turn-helix domain JM955_RS19600 PF06018 CodY GAF-like domain JM955_RS19605 PF07724 AAA domain (Cdc48 subfamily) JM955_RS19605 PF00004 ATPase family associated with various cellular activities (AAA) JM955_RS19605 PF10431 C-terminal, D2-small domain, of ClpB protein JM955_RS19610 PF00227 Proteasome subunit JM955_RS19615 PF00589 Phage integrase family JM955_RS19615 PF02899 Phage integrase, N-terminal SAM-like domain JM955_RS19620 PF01134 Glucose inhibited division protein A JM955_RS19625 PF01396 Topoisomerase DNA binding C4 zinc finger JM955_RS19625 PF01751 Toprim domain JM955_RS19625 PF01131 DNA topoisomerase JM955_RS19630 PF02481 DNA recombination-mediator protein A JM955_RS19635 PF00549 CoA-ligase JM955_RS19635 PF02629 CoA binding domain JM955_RS19640 PF08442 ATP-grasp domain JM955_RS19640 PF00549 CoA-ligase JM955_RS19645 PF01351 Ribonuclease HII JM955_RS19650 PF01926 50S ribosome-binding GTPase JM955_RS19655 PF10502 Signal peptidase, peptidase S26 JM955_RS19660 PF01245 Ribosomal protein L19 JM955_RS19665 PF01746 tRNA (Guanine-1)-methyltransferase JM955_RS19670 PF01782 RimM N-terminal domain JM955_RS19670 PF05239 PRC-barrel domain JM955_RS19680 PF00886 Ribosomal protein S16 JM955_RS19685 PF02881 SRP54-type protein, helical bundle domain JM955_RS19685 PF00448 SRP54-type protein, GTPase domain JM955_RS19685 PF02978 Signal peptide binding domain JM955_RS19690 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JM955_RS19695 PF00448 SRP54-type protein, GTPase domain JM955_RS19695 PF02881 SRP54-type protein, helical bundle domain JM955_RS19700 PF02463 RecF/RecN/SMC N terminal domain JM955_RS19700 PF06470 SMC proteins Flexible Hinge Domain JM955_RS19705 PF00035 Double-stranded RNA binding motif JM955_RS19705 PF14622 Ribonuclease-III-like JM955_RS19710 PF00550 Phosphopantetheine attachment site JM955_RS19720 PF00698 Acyl transferase domain JM955_RS19725 PF02504 Fatty acid synthesis protein JM955_RS19730 PF03061 Thioesterase superfamily JM955_RS19735 PF17191 RecG wedge domain JM955_RS19735 PF00271 Helicase conserved C-terminal domain JM955_RS19735 PF00270 DEAD/DEAH box helicase JM955_RS19740 PF13684 Dihydroxyacetone kinase family JM955_RS19740 PF02734 DAK2 domain JM955_RS19745 PF03780 Asp23 family, cell envelope-related function JM955_RS19750 PF00830 Ribosomal L28 family JM955_RS19755 PF08183 Stage V sporulation protein family JM955_RS19760 PF04263 Thiamin pyrophosphokinase, catalytic domain JM955_RS19760 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JM955_RS19765 PF00834 Ribulose-phosphate 3 epimerase family JM955_RS19770 PF03193 RsgA GTPase JM955_RS19770 PF16745 RsgA N-terminal domain JM955_RS19775 PF03793 PASTA domain JM955_RS19775 PF00069 Protein kinase domain JM955_RS19785 PF04055 Radical SAM superfamily JM955_RS19790 PF01029 NusB family JM955_RS19790 PF01189 16S rRNA methyltransferase RsmB/F JM955_RS19795 PF02911 Formyl transferase, C-terminal domain JM955_RS19795 PF00551 Formyl transferase JM955_RS19800 PF01327 Polypeptide deformylase JM955_RS19805 PF17764 3′ DNA-binding domain (3′BD) JM955_RS19805 PF04851 Type III restriction enzyme, res subunit JM955_RS19805 PF00271 Helicase conserved C-terminal domain JM955_RS19805 PF18074 Primosomal protein N C-terminal domain JM955_RS19805 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JM955_RS19810 PF02441 Flavoprotein JM955_RS19810 PF04127 DNA / pantothenate metabolism flavoprotein JM955_RS19815 PF01192 RNA polymerase Rpb6 JM955_RS19820 PF00625 Guanylate kinase JM955_RS19825 PF04025 Domain of unknown function (DUF370) JM955_RS19830 PF03755 YicC-like family, N-terminal region JM955_RS19830 PF08340 Domain of unknown function (DUF1732) JM955_RS19835 PF00689 Cation transporting ATPase, C-terminus JM955_RS19835 PF00690 Cation transporter/ATPase, N-terminus JM955_RS19840 PF05670 NFACT protein RNA binding domain JM955_RS19850 PF01321 Creatinase/Prolidase N-terminal domain JM955_RS19850 PF00557 Metallopeptidase family M24 JM955_RS19885 PF00156 Phosphoribosyl transferase domain JM955_RS19890 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JM955_RS19895 PF01180 Dihydroorotate dehydrogenase JM955_RS19900 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JM955_RS19905 PF02142 MGS-like domain JM955_RS19905 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JM955_RS19905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JM955_RS19910 PF00117 Glutamine amidotransferase class-I JM955_RS19910 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JM955_RS19915 PF01979 Amidohydrolase family JM955_RS19920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JM955_RS19920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JM955_RS19925 PF00860 Permease family JM955_RS19930 PF00156 Phosphoribosyl transferase domain JM955_RS19935 PF00849 RNA pseudouridylate synthase JM955_RS19935 PF01479 S4 domain JM955_RS19940 PF01252 Signal peptidase (SPase) II JM955_RS19950 PF08264 Anticodon-binding domain of tRNA JM955_RS19950 PF06827 Zinc finger found in FPG and IleRS JM955_RS19950 PF00133 tRNA synthetases class I (I, L, M and V) JM955_RS19955 PF05103 DivIVA protein JM955_RS19960 PF17774 Putative RNA-binding domain in YlmH JM955_RS19960 PF01479 S4 domain JM955_RS19965 PF02325 YGGT family JM955_RS19970 PF04472 Cell division protein SepF JM955_RS19975 PF01168 Alanine racemase, N-terminal domain JM955_RS19980 PF02578 Multi-copper polyphenol oxidoreductase laccase JM955_RS19985 PF05239 PRC-barrel domain JM955_RS19990 PF04542 Sigma-70 region 2 JM955_RS19990 PF04545 Sigma-70, region 4 JM955_RS19990 PF04539 Sigma-70 region 3 JM955_RS19995 PF04545 Sigma-70, region 4 JM955_RS19995 PF04542 Sigma-70 region 2 JM955_RS20000 PF03419 Sporulation factor SpoIIGA JM955_RS20005 PF12327 FtsZ family, C-terminal domain JM955_RS20005 PF00091 Tubulin/FtsZ family, GTPase domain JM955_RS20010 PF02491 SHS2 domain inserted in FTSA JM955_RS20015 PF03799 Cell division protein FtsQ JM955_RS20015 PF08478 POTRA domain, FtsQ-type JM955_RS20020 PF01565 FAD binding domain JM955_RS20020 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JM955_RS20025 PF03033 Glycosyltransferase family 28 N-terminal domain JM955_RS20025 PF04101 Glycosyltransferase family 28 C-terminal domain JM955_RS20030 PF01098 Cell cycle protein JM955_RS20035 PF08245 Mur ligase middle domain JM955_RS20035 PF02875 Mur ligase family, glutamate ligase domain JM955_RS20040 PF00953 Glycosyl transferase family 4 JM955_RS20040 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JM955_RS20045 PF01225 Mur ligase family, catalytic domain JM955_RS20045 PF02875 Mur ligase family, glutamate ligase domain JM955_RS20045 PF08245 Mur ligase middle domain JM955_RS20050 PF00905 Penicillin binding protein transpeptidase domain JM955_RS20050 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS20050 PF03793 PASTA domain JM955_RS20055 PF03793 PASTA domain JM955_RS20055 PF00905 Penicillin binding protein transpeptidase domain JM955_RS20055 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS20060 PF04977 Septum formation initiator JM955_RS20065 PF01795 MraW methylase family JM955_RS20070 PF10079 Bacillithiol biosynthesis BshC JM955_RS20075 PF08546 Ketopantoate reductase PanE/ApbA C terminal JM955_RS20075 PF02558 Ketopantoate reductase PanE/ApbA JM955_RS20080 PF00583 Acetyltransferase (GNAT) family JM955_RS20090 PF01783 Ribosomal L32p protein family JM955_RS20095 PF02620 Large ribosomal RNA subunit accumulation protein YceD JM955_RS20100 PF05636 HIGH Nucleotidyl Transferase JM955_RS20105 PF05362 Lon protease (S16) C-terminal proteolytic domain JM955_RS20105 PF13180 PDZ domain JM955_RS20110 PF01734 Patatin-like phospholipase JM955_RS20115 PF07670 Nucleoside recognition JM955_RS20120 PF01467 Cytidylyltransferase-like JM955_RS20135 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JM955_RS20140 PF06133 Control of competence regulator ComK, YlbF/YmcA JM955_RS20145 PF00300 Histidine phosphatase superfamily (branch 1) JM955_RS20150 PF14003 YlbE-like protein JM955_RS20155 PF14071 Putative coat protein JM955_RS20160 PF14504 CAP-associated N-terminal JM955_RS20160 PF00188 Cysteine-rich secretory protein family JM955_RS20165 PF08868 YugN-like family JM955_RS20170 PF00795 Carbon-nitrogen hydrolase JM955_RS20175 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JM955_RS20180 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JM955_RS20185 PF00510 Cytochrome c oxidase subunit III JM955_RS20190 PF00115 Cytochrome C and Quinol oxidase polypeptide I JM955_RS20195 PF00034 Cytochrome c JM955_RS20195 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JM955_RS20195 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JM955_RS20200 PF01040 UbiA prenyltransferase family JM955_RS20205 PF02628 Cytochrome oxidase assembly protein JM955_RS20210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JM955_RS20210 PF00682 HMGL-like JM955_RS20210 PF02436 Conserved carboxylase domain JM955_RS20210 PF00289 Biotin carboxylase, N-terminal domain JM955_RS20210 PF02785 Biotin carboxylase C-terminal domain JM955_RS20210 PF00364 Biotin-requiring enzyme JM955_RS20215 PF01098 Cell cycle protein JM955_RS20220 PF07408 Protein of unknown function (DUF1507) JM955_RS20230 PF02562 PhoH-like protein JM955_RS20230 PF13638 PIN domain JM955_RS20240 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JM955_RS20250 PF14036 YlaH-like protein JM955_RS20255 PF03144 Elongation factor Tu domain 2 JM955_RS20255 PF00009 Elongation factor Tu GTP binding domain JM955_RS20255 PF00679 Elongation factor G C-terminus JM955_RS20255 PF14492 Elongation Factor G, domain II JM955_RS20265 PF00459 Inositol monophosphatase family JM955_RS20275 PF06335 Protein of unknown function (DUF1054) JM955_RS20280 PF05256 Uncharacterised protein family (UPF0223) JM955_RS20285 PF01276 Orn/Lys/Arg decarboxylase, major domain JM955_RS20285 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JM955_RS20325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JM955_RS20325 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS20330 PF02817 e3 binding domain JM955_RS20330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JM955_RS20330 PF00364 Biotin-requiring enzyme JM955_RS20335 PF02779 Transketolase, pyrimidine binding domain JM955_RS20335 PF02780 Transketolase, C-terminal domain JM955_RS20340 PF00676 Dehydrogenase E1 component JM955_RS20350 PF01327 Polypeptide deformylase JM955_RS20360 PF07288 Protein of unknown function (DUF1447) JM955_RS20365 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JM955_RS20365 PF17770 Ribonuclease J C-terminal domain JM955_RS20365 PF00753 Metallo-beta-lactamase superfamily JM955_RS20370 PF02254 TrkA-N domain JM955_RS20370 PF02080 TrkA-C domain JM955_RS20380 PF01546 Peptidase family M20/M25/M40 JM955_RS20380 PF07687 Peptidase dimerisation domain JM955_RS20385 PF14602 Hexapeptide repeat of succinyl-transferase JM955_RS20385 PF00132 Bacterial transferase hexapeptide (six repeats) JM955_RS20385 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JM955_RS20390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS20390 PF03466 LysR substrate binding domain JM955_RS20405 PF04308 Ribonuclease H-like JM955_RS20415 PF08796 Protein of unknown function (DUF1797) JM955_RS20430 PF00563 EAL domain JM955_RS20430 PF10388 EAL-domain associated signalling protein domain JM955_RS20440 PF00149 Calcineurin-like phosphoesterase JM955_RS20440 PF10518 TAT (twin-arginine translocation) pathway signal sequence JM955_RS20450 PF02503 Polyphosphate kinase middle domain JM955_RS20450 PF17941 Polyphosphate kinase C-terminal domain 1 JM955_RS20450 PF13089 Polyphosphate kinase N-terminal domain JM955_RS20450 PF13090 Polyphosphate kinase C-terminal domain 2 JM955_RS20455 PF02541 Ppx/GppA phosphatase family JM955_RS20460 PF14177 YkyB-like protein JM955_RS20485 PF07690 Major Facilitator Superfamily JM955_RS20495 PF01717 Cobalamin-independent synthase, Catalytic domain JM955_RS20495 PF08267 Cobalamin-independent synthase, N-terminal domain JM955_RS20505 PF14040 Deoxyribonuclease NucA/NucB JM955_RS20515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS20515 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS20525 PF00155 Aminotransferase class I and II JM955_RS20530 PF00356 Bacterial regulatory proteins, lacI family JM955_RS20530 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JM955_RS20535 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS20540 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS20545 PF13416 Bacterial extracellular solute-binding protein JM955_RS20550 PF00128 Alpha amylase, catalytic domain JM955_RS20550 PF02903 Alpha amylase, N-terminal ig-like domain JM955_RS20550 PF16657 Maltogenic Amylase, C-terminal domain JM955_RS20555 PF16657 Maltogenic Amylase, C-terminal domain JM955_RS20555 PF00128 Alpha amylase, catalytic domain JM955_RS20560 PF17912 MalK OB fold domain JM955_RS20560 PF00005 ABC transporter JM955_RS20560 PF03459 TOBE domain JM955_RS20600 PF02803 Thiolase, C-terminal domain JM955_RS20600 PF00108 Thiolase, N-terminal domain JM955_RS20605 PF00293 NUDIX domain JM955_RS20635 PF03551 Transcriptional regulator PadR-like family JM955_RS20650 PF01008 Initiation factor 2 subunit family JM955_RS20655 PF01636 Phosphotransferase enzyme family JM955_RS20660 PF00795 Carbon-nitrogen hydrolase JM955_RS20665 PF00155 Aminotransferase class I and II JM955_RS20670 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JM955_RS20670 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JM955_RS20680 PF00596 Class II Aldolase and Adducin N-terminal domain JM955_RS20685 PF03079 ARD/ARD' family JM955_RS20700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JM955_RS20700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JM955_RS20705 PF00144 Beta-lactamase JM955_RS20710 PF08448 PAS fold JM955_RS20710 PF00990 Diguanylate cyclase, GGDEF domain JM955_RS20715 PF00881 Nitroreductase family JM955_RS20730 PF05524 PEP-utilising enzyme, N-terminal JM955_RS20730 PF02896 PEP-utilising enzyme, TIM barrel domain JM955_RS20730 PF00391 PEP-utilising enzyme, mobile domain JM955_RS20735 PF00381 PTS HPr component phosphorylation site JM955_RS20740 PF00367 phosphotransferase system, EIIB JM955_RS20740 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JM955_RS20740 PF02378 Phosphotransferase system, EIIC JM955_RS20745 PF00874 PRD domain JM955_RS20745 PF03123 CAT RNA binding domain JM955_RS20755 PF07702 UTRA domain JM955_RS20755 PF00392 Bacterial regulatory proteins, gntR family JM955_RS20760 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JM955_RS20765 PF01979 Amidohydrolase family JM955_RS20775 PF04079 Segregation and condensation complex subunit ScpB JM955_RS20780 PF02616 Segregation and condensation protein ScpA JM955_RS20790 PF03745 Domain of unknown function (DUF309) JM955_RS20795 PF00583 Acetyltransferase (GNAT) family JM955_RS20800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JM955_RS20805 PF06207 Protein of unknown function (DUF1002) JM955_RS20815 PF03323 Bacillus/Clostridium GerA spore germination protein JM955_RS20820 PF14097 Stage V sporulation protein AE1 JM955_RS20825 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JM955_RS20830 PF07451 Stage V sporulation protein AD (SpoVAD) JM955_RS20835 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JM955_RS20840 PF13782 Stage V sporulation protein AB JM955_RS20845 PF12164 Stage V sporulation protein AA JM955_RS20855 PF00209 Sodium:neurotransmitter symporter family JM955_RS20860 PF04545 Sigma-70, region 4 JM955_RS20860 PF04539 Sigma-70 region 3 JM955_RS20860 PF04542 Sigma-70 region 2 JM955_RS20865 PF13581 Histidine kinase-like ATPase domain JM955_RS20870 PF01740 STAS domain JM955_RS20875 PF07943 Penicillin-binding protein 5, C-terminal domain JM955_RS20875 PF00768 D-alanyl-D-alanine carboxypeptidase JM955_RS20880 PF00392 Bacterial regulatory proteins, gntR family JM955_RS20885 PF00005 ABC transporter JM955_RS20900 PF01047 MarR family JM955_RS20910 PF00860 Permease family JM955_RS20915 PF01544 CorA-like Mg2+ transporter protein JM955_RS20920 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JM955_RS20920 PF00591 Glycosyl transferase family, a/b domain JM955_RS20920 PF02885 Glycosyl transferase family, helical bundle domain JM955_RS20925 PF01048 Phosphorylase superfamily JM955_RS20930 PF01676 Metalloenzyme superfamily JM955_RS20935 PF13115 YtkA-like JM955_RS20940 PF02899 Phage integrase, N-terminal SAM-like domain JM955_RS20940 PF00589 Phage integrase family JM955_RS20945 PF14004 Protein of unknown function (DUF4227) JM955_RS20950 PF01475 Ferric uptake regulator family JM955_RS20955 PF01944 Stage II sporulation protein M JM955_RS20965 PF00293 NUDIX domain JM955_RS20970 PF13072 Mother cell inhibitor of FtsZ JM955_RS20975 PF00248 Aldo/keto reductase family JM955_RS20980 PF00248 Aldo/keto reductase family JM955_RS20985 PF13673 Acetyltransferase (GNAT) domain JM955_RS20985 PF04229 GrpB protein JM955_RS20995 PF02872 5'-nucleotidase, C-terminal domain JM955_RS20995 PF00565 Staphylococcal nuclease homologue JM955_RS20995 PF00149 Calcineurin-like phosphoesterase JM955_RS20995 PF00746 LPXTG cell wall anchor motif JM955_RS21005 PF12146 Serine aminopeptidase, S33 JM955_RS21010 PF13726 Na+-H+ antiporter family JM955_RS21010 PF03553 Na+/H+ antiporter family JM955_RS21015 PF00356 Bacterial regulatory proteins, lacI family JM955_RS21020 PF00583 Acetyltransferase (GNAT) family JM955_RS21025 PF12146 Serine aminopeptidase, S33 JM955_RS21030 PF10827 Protein of unknown function (DUF2552) JM955_RS21040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JM955_RS21040 PF01872 RibD C-terminal domain JM955_RS21045 PF00677 Lumazine binding domain JM955_RS21050 PF00925 GTP cyclohydrolase II JM955_RS21050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JM955_RS21055 PF00885 6,7-dimethyl-8-ribityllumazine synthase JM955_RS21065 PF04055 Radical SAM superfamily JM955_RS21065 PF06968 Biotin and Thiamin Synthesis associated domain JM955_RS21070 PF13847 Methyltransferase domain JM955_RS21075 PF08241 Methyltransferase domain JM955_RS21075 PF12697 Alpha/beta hydrolase family JM955_RS21080 PF00155 Aminotransferase class I and II JM955_RS21090 PF00202 Aminotransferase class-III JM955_RS21100 PF03553 Na+/H+ antiporter family JM955_RS21105 PF00149 Calcineurin-like phosphoesterase JM955_RS21105 PF02872 5'-nucleotidase, C-terminal domain JM955_RS21115 PF13404 AsnC-type helix-turn-helix domain JM955_RS21115 PF01037 Lrp/AsnC ligand binding domain JM955_RS21155 PF04740 LXG domain of WXG superfamily JM955_RS21155 PF14431 YwqJ-like deaminase JM955_RS21155 PF14449 Pre-toxin TG JM955_RS21160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JM955_RS21160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JM955_RS21165 PF00202 Aminotransferase class-III JM955_RS21170 PF00696 Amino acid kinase family JM955_RS21175 PF01960 ArgJ family JM955_RS21180 PF02774 Semialdehyde dehydrogenase, dimerisation domain JM955_RS21180 PF01118 Semialdehyde dehydrogenase, NAD binding domain JM955_RS21190 PF00106 short chain dehydrogenase JM955_RS21195 PF00753 Metallo-beta-lactamase superfamily JM955_RS21200 PF14748 Pyrroline-5-carboxylate reductase dimerisation JM955_RS21200 PF03807 NADP oxidoreductase coenzyme F420-dependent JM955_RS21205 PF03313 Serine dehydratase alpha chain JM955_RS21210 PF01842 ACT domain JM955_RS21210 PF03315 Serine dehydratase beta chain JM955_RS21225 PF12706 Beta-lactamase superfamily domain JM955_RS21225 PF00753 Metallo-beta-lactamase superfamily JM955_RS21240 PF00689 Cation transporting ATPase, C-terminus JM955_RS21240 PF00690 Cation transporter/ATPase, N-terminus JM955_RS21245 PF02308 MgtC family JM955_RS21250 PF11799 impB/mucB/samB family C-terminal domain JM955_RS21250 PF00817 impB/mucB/samB family JM955_RS21250 PF11798 IMS family HHH motif JM955_RS21255 PF07687 Peptidase dimerisation domain JM955_RS21255 PF01546 Peptidase family M20/M25/M40 JM955_RS21260 PF13302 Acetyltransferase (GNAT) domain JM955_RS21275 PF03734 L,D-transpeptidase catalytic domain JM955_RS21280 PF11728 Putative aromatic acid exporter C-terminal domain JM955_RS21280 PF06081 Aromatic acid exporter family member 1 JM955_RS21285 PF00005 ABC transporter JM955_RS21290 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS21295 PF00497 Bacterial extracellular solute-binding proteins, family 3 JM955_RS21300 PF06491 Disulphide isomerase JM955_RS21305 PF11208 Protein of unknown function (DUF2992) JM955_RS21310 PF09297 NADH pyrophosphatase zinc ribbon domain JM955_RS21310 PF00293 NUDIX domain JM955_RS21315 PF04239 Protein of unknown function (DUF421) JM955_RS21320 PF01098 Cell cycle protein JM955_RS21325 PF00364 Biotin-requiring enzyme JM955_RS21325 PF02817 e3 binding domain JM955_RS21325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JM955_RS21330 PF02780 Transketolase, C-terminal domain JM955_RS21330 PF02779 Transketolase, pyrimidine binding domain JM955_RS21335 PF00676 Dehydrogenase E1 component JM955_RS21340 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS21340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JM955_RS21345 PF00871 Acetokinase family JM955_RS21350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JM955_RS21350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JM955_RS21355 PF01515 Phosphate acetyl/butaryl transferase JM955_RS21360 PF02954 Bacterial regulatory protein, Fis family JM955_RS21360 PF00158 Sigma-54 interaction domain JM955_RS21360 PF00989 PAS fold JM955_RS21370 PF03009 Glycerophosphoryl diester phosphodiesterase family JM955_RS21375 PF14174 YycC-like protein JM955_RS21385 PF00072 Response regulator receiver domain JM955_RS21385 PF08769 Sporulation initiation factor Spo0A C terminal JM955_RS21390 PF05580 SpoIVB peptidase S55 JM955_RS21390 PF17820 PDZ domain JM955_RS21395 PF13476 AAA domain JM955_RS21400 PF02863 Arginine repressor, C-terminal domain JM955_RS21400 PF01316 Arginine repressor, DNA binding domain JM955_RS21405 PF01728 FtsJ-like methyltransferase JM955_RS21405 PF01479 S4 domain JM955_RS21410 PF02780 Transketolase, C-terminal domain JM955_RS21410 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JM955_RS21410 PF02779 Transketolase, pyrimidine binding domain JM955_RS21415 PF00348 Polyprenyl synthetase JM955_RS21420 PF02609 Exonuclease VII small subunit JM955_RS21425 PF02601 Exonuclease VII, large subunit JM955_RS21425 PF13742 OB-fold nucleic acid binding domain JM955_RS21430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JM955_RS21430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JM955_RS21435 PF01029 NusB family JM955_RS21440 PF03780 Asp23 family, cell envelope-related function JM955_RS21445 PF02785 Biotin carboxylase C-terminal domain JM955_RS21445 PF00289 Biotin carboxylase, N-terminal domain JM955_RS21445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JM955_RS21450 PF00364 Biotin-requiring enzyme JM955_RS21460 PF12685 SpoIIIAH-like protein JM955_RS21470 PF09581 Stage III sporulation protein AF (Spore_III_AF) JM955_RS21475 PF09546 Stage III sporulation protein AE (spore_III_AE) JM955_RS21480 PF06686 Stage III sporulation protein AC/AD protein family JM955_RS21485 PF06686 Stage III sporulation protein AC/AD protein family JM955_RS21490 PF09548 Stage III sporulation protein AB (spore_III_AB) JM955_RS21515 PF01132 Elongation factor P (EF-P) OB domain JM955_RS21515 PF08207 Elongation factor P (EF-P) KOW-like domain JM955_RS21515 PF09285 Elongation factor P, C-terminal JM955_RS21520 PF01321 Creatinase/Prolidase N-terminal domain JM955_RS21520 PF00557 Metallopeptidase family M24 JM955_RS21525 PF01220 Dehydroquinase class II JM955_RS21530 PF11085 Conserved membrane protein YqhR JM955_RS21535 PF07136 Protein of unknown function (DUF1385) JM955_RS21545 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS21550 PF01325 Iron dependent repressor, N-terminal DNA binding domain JM955_RS21550 PF02742 Iron dependent repressor, metal binding and dimerisation domain JM955_RS21575 PF03099 Biotin/lipoate A/B protein ligase family JM955_RS21580 PF00581 Rhodanese-like domain JM955_RS21590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JM955_RS21590 PF00356 Bacterial regulatory proteins, lacI family JM955_RS21600 PF00893 Small Multidrug Resistance protein JM955_RS21605 PF00893 Small Multidrug Resistance protein JM955_RS21635 PF00005 ABC transporter JM955_RS21640 PF00392 Bacterial regulatory proteins, gntR family JM955_RS21655 PF02347 Glycine cleavage system P-protein JM955_RS21660 PF02347 Glycine cleavage system P-protein JM955_RS21665 PF08669 Glycine cleavage T-protein C-terminal barrel domain JM955_RS21665 PF01571 Aminomethyltransferase folate-binding domain JM955_RS21670 PF00176 SNF2 family N-terminal domain JM955_RS21670 PF00271 Helicase conserved C-terminal domain JM955_RS21675 PF11079 Bacterial protein YqhG of unknown function JM955_RS21695 PF14038 YqzE-like protein JM955_RS21700 PF01202 Shikimate kinase JM955_RS21735 PF00482 Type II secretion system (T2SS), protein F JM955_RS21740 PF00437 Type II/IV secretion system protein JM955_RS21750 PF11117 Protein of unknown function (DUF2626) JM955_RS21755 PF00375 Sodium:dicarboxylate symporter family JM955_RS21795 PF12323 Helix-turn-helix domain JM955_RS21795 PF01385 Probable transposase JM955_RS21795 PF07282 Putative transposase DNA-binding domain JM955_RS21805 PF02310 B12 binding domain JM955_RS21805 PF02965 Vitamin B12 dependent methionine synthase, activation domain JM955_RS21805 PF02574 Homocysteine S-methyltransferase JM955_RS21805 PF00809 Pterin binding enzyme JM955_RS21805 PF02607 B12 binding domain JM955_RS21810 PF02574 Homocysteine S-methyltransferase JM955_RS21810 PF02219 Methylenetetrahydrofolate reductase JM955_RS21815 PF01053 Cys/Met metabolism PLP-dependent enzyme JM955_RS21820 PF01053 Cys/Met metabolism PLP-dependent enzyme JM955_RS21830 PF01022 Bacterial regulatory protein, arsR family JM955_RS21840 PF00753 Metallo-beta-lactamase superfamily JM955_RS21845 PF10958 Protein of unknown function (DUF2759) JM955_RS21850 PF00480 ROK family JM955_RS21855 PF06014 Bacterial protein of unknown function (DUF910) JM955_RS21860 PF01812 5-formyltetrahydrofolate cyclo-ligase family JM955_RS21865 PF00471 Ribosomal protein L33 JM955_RS21870 PF00483 Nucleotidyl transferase JM955_RS21875 PF01895 PhoU domain JM955_RS21880 PF00005 ABC transporter JM955_RS21885 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS21890 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS21895 PF12849 PBP superfamily domain JM955_RS21900 PF00905 Penicillin binding protein transpeptidase domain JM955_RS21900 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS21905 PF07690 Major Facilitator Superfamily JM955_RS21910 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JM955_RS21910 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JM955_RS21920 PF06691 Protein of unknown function (DUF1189) JM955_RS21930 PF04551 GcpE protein JM955_RS21935 PF01475 Ferric uptake regulator family JM955_RS21940 PF00950 ABC 3 transport family JM955_RS21945 PF00005 ABC transporter JM955_RS21950 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS21950 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JM955_RS21955 PF11116 Protein of unknown function (DUF2624) JM955_RS21960 PF01261 Xylose isomerase-like TIM barrel JM955_RS21965 PF00270 DEAD/DEAH box helicase JM955_RS21965 PF00271 Helicase conserved C-terminal domain JM955_RS21975 PF02401 LytB protein JM955_RS21980 PF01784 NIF3 (NGG1p interacting factor 3) JM955_RS21985 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JM955_RS21990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JM955_RS21995 PF00140 Sigma-70 factor, region 1.2 JM955_RS21995 PF04542 Sigma-70 region 2 JM955_RS21995 PF04539 Sigma-70 region 3 JM955_RS21995 PF04545 Sigma-70, region 4 JM955_RS21995 PF03979 Sigma-70 factor, region 1.1 JM955_RS22000 PF01807 CHC2 zinc finger JM955_RS22000 PF08275 DNA primase catalytic core, N-terminal domain JM955_RS22000 PF10410 DnaB-helicase binding domain of primase JM955_RS22010 PF03618 Kinase/pyrophosphorylase JM955_RS22015 PF00571 CBS domain JM955_RS22015 PF08279 HTH domain JM955_RS22020 PF02565 Recombination protein O C terminal JM955_RS22020 PF11967 Recombination protein O N terminal JM955_RS22030 PF01926 50S ribosome-binding GTPase JM955_RS22030 PF07650 KH domain JM955_RS22035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JM955_RS22040 PF01219 Prokaryotic diacylglycerol kinase JM955_RS22045 PF02130 Uncharacterized protein family UPF0054 JM955_RS22050 PF07697 7TM-HD extracellular JM955_RS22050 PF01966 HD domain JM955_RS22050 PF07698 7TM receptor with intracellular HD hydrolase JM955_RS22055 PF02562 PhoH-like protein JM955_RS22060 PF06898 Putative stage IV sporulation protein YqfD JM955_RS22065 PF07873 YabP family JM955_RS22075 PF09424 Yqey-like protein JM955_RS22080 PF01165 Ribosomal protein S21 JM955_RS22085 PF04055 Radical SAM superfamily JM955_RS22085 PF01938 TRAM domain JM955_RS22085 PF00919 Uncharacterized protein family UPF0004 JM955_RS22090 PF04452 RNA methyltransferase JM955_RS22100 PF00684 DnaJ central domain JM955_RS22100 PF01556 DnaJ C terminal domain JM955_RS22100 PF00226 DnaJ domain JM955_RS22105 PF00012 Hsp70 protein JM955_RS22110 PF01025 GrpE JM955_RS22115 PF01628 HrcA protein C terminal domain JM955_RS22120 PF04055 Radical SAM superfamily JM955_RS22120 PF06969 HemN C-terminal domain JM955_RS22125 PF01638 HxlR-like helix-turn-helix JM955_RS22130 PF00009 Elongation factor Tu GTP binding domain JM955_RS22130 PF00679 Elongation factor G C-terminus JM955_RS22130 PF06421 GTP-binding protein LepA C-terminus JM955_RS22130 PF03144 Elongation factor Tu domain 2 JM955_RS22140 PF03418 Germination protease JM955_RS22145 PF01649 Ribosomal protein S20 JM955_RS22150 PF06144 DNA polymerase III, delta subunit JM955_RS22155 PF14141 YqzM-like protein JM955_RS22160 PF03772 Competence protein JM955_RS22160 PF13567 Domain of unknown function (DUF4131) JM955_RS22160 PF00753 Metallo-beta-lactamase superfamily JM955_RS22165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JM955_RS22170 PF10531 SLBB domain JM955_RS22175 PF03807 NADP oxidoreductase coenzyme F420-dependent JM955_RS22175 PF14748 Pyrroline-5-carboxylate reductase dimerisation JM955_RS22180 PF13649 Methyltransferase domain JM955_RS22190 PF01966 HD domain JM955_RS22195 PF01467 Cytidylyltransferase-like JM955_RS22200 PF01985 CRS1 / YhbY (CRM) domain JM955_RS22205 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JM955_RS22205 PF01488 Shikimate / quinate 5-dehydrogenase JM955_RS22205 PF08501 Shikimate dehydrogenase substrate binding domain JM955_RS22210 PF01926 50S ribosome-binding GTPase JM955_RS22225 PF02666 Phosphatidylserine decarboxylase JM955_RS22230 PF04542 Sigma-70 region 2 JM955_RS22230 PF04545 Sigma-70, region 4 JM955_RS22240 PF16244 Domain of unknown function (DUF4901) JM955_RS22245 PF00471 Ribosomal protein L33 JM955_RS22250 PF00881 Nitroreductase family JM955_RS22255 PF04607 Region found in RelA / SpoT proteins JM955_RS22265 PF00245 Alkaline phosphatase JM955_RS22270 PF00583 Acetyltransferase (GNAT) family JM955_RS22275 PF00561 alpha/beta hydrolase fold JM955_RS22275 PF08386 TAP-like protein JM955_RS22315 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JM955_RS22325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM955_RS22330 PF07681 DoxX JM955_RS22360 PF00005 ABC transporter JM955_RS22365 PF01032 FecCD transport family JM955_RS22370 PF01497 Periplasmic binding protein JM955_RS22375 PF14143 YrhC-like protein JM955_RS22380 PF00465 Iron-containing alcohol dehydrogenase JM955_RS22380 PF00171 Aldehyde dehydrogenase family JM955_RS22385 PF01053 Cys/Met metabolism PLP-dependent enzyme JM955_RS22390 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS22395 PF01048 Phosphorylase superfamily JM955_RS22400 PF08241 Methyltransferase domain JM955_RS22415 PF03717 Penicillin-binding Protein dimerisation domain JM955_RS22415 PF00905 Penicillin binding protein transpeptidase domain JM955_RS22420 PF03449 Transcription elongation factor, N-terminal JM955_RS22420 PF01272 Transcription elongation factor, GreA/GreB, C-term JM955_RS22425 PF00485 Phosphoribulokinase / Uridine kinase family JM955_RS22430 PF16325 Peptidase family U32 C-terminal domain JM955_RS22430 PF01136 Peptidase family U32 JM955_RS22435 PF01136 Peptidase family U32 JM955_RS22440 PF01596 O-methyltransferase JM955_RS22445 PF02618 YceG-like family JM955_RS22450 PF06949 Protein of unknown function (DUF1292) JM955_RS22455 PF03652 Holliday junction resolvase JM955_RS22460 PF06135 IreB regulatory phosphoprotein JM955_RS22465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JM955_RS22465 PF02272 DHHA1 domain JM955_RS22465 PF01411 tRNA synthetases class II (A) JM955_RS22475 PF01594 AI-2E family transporter JM955_RS22495 PF13538 UvrD-like helicase C-terminal domain JM955_RS22495 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JM955_RS22495 PF14490 Helix-hairpin-helix containing domain JM955_RS22510 PF00266 Aminotransferase class-V JM955_RS22515 PF02082 Transcriptional regulator JM955_RS22520 PF12002 MgsA AAA+ ATPase C terminal JM955_RS22520 PF05496 Holliday junction DNA helicase RuvB P-loop domain JM955_RS22520 PF16193 AAA C-terminal domain JM955_RS22530 PF00899 ThiF family JM955_RS22535 PF02938 GAD domain JM955_RS22535 PF00152 tRNA synthetases class II (D, K and N) JM955_RS22535 PF01336 OB-fold nucleic acid binding domain JM955_RS22540 PF03129 Anticodon binding domain JM955_RS22540 PF13393 Histidyl-tRNA synthetase JM955_RS22550 PF02580 D-Tyr-tRNA(Tyr) deacylase JM955_RS22555 PF02824 TGS domain JM955_RS22555 PF04607 Region found in RelA / SpoT proteins JM955_RS22555 PF13291 ACT domain JM955_RS22560 PF00156 Phosphoribosyl transferase domain JM955_RS22565 PF17768 RecJ OB domain JM955_RS22565 PF02272 DHHA1 domain JM955_RS22565 PF01368 DHH family JM955_RS22565 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JM955_RS22570 PF01545 Cation efflux family JM955_RS22570 PF16916 Dimerisation domain of Zinc Transporter JM955_RS22575 PF07549 SecD/SecF GG Motif JM955_RS22575 PF02355 Protein export membrane protein JM955_RS22580 PF13797 Post-transcriptional regulator JM955_RS22585 PF01943 Polysaccharide biosynthesis protein JM955_RS22585 PF14667 Polysaccharide biosynthesis C-terminal domain JM955_RS22590 PF04239 Protein of unknown function (DUF421) JM955_RS22600 PF02699 Preprotein translocase subunit JM955_RS22605 PF01702 Queuine tRNA-ribosyltransferase JM955_RS22610 PF02547 Queuosine biosynthesis protein JM955_RS22615 PF11146 Protein of unknown function (DUF2905) JM955_RS22620 PF05491 RuvB C-terminal winged helix domain JM955_RS22620 PF05496 Holliday junction DNA helicase RuvB P-loop domain JM955_RS22620 PF17864 RuvB AAA lid domain JM955_RS22625 PF07499 RuvA, C-terminal domain JM955_RS22625 PF01330 RuvA N terminal domain JM955_RS22630 PF01497 Periplasmic binding protein JM955_RS22650 PF01476 LysM domain JM955_RS22655 PF02445 Quinolinate synthetase A protein JM955_RS22660 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JM955_RS22660 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JM955_RS22665 PF02910 Fumarate reductase flavoprotein C-term JM955_RS22665 PF00890 FAD binding domain JM955_RS22670 PF00266 Aminotransferase class-V JM955_RS22675 PF08279 HTH domain JM955_RS22675 PF02829 3H domain JM955_RS22680 PF03473 MOSC domain JM955_RS22680 PF03475 3-alpha domain JM955_RS22685 PF00800 Prephenate dehydratase JM955_RS22685 PF01842 ACT domain JM955_RS22690 PF02687 FtsX-like permease family JM955_RS22695 PF02687 FtsX-like permease family JM955_RS22700 PF00005 ABC transporter JM955_RS22705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS22710 PF00486 Transcriptional regulatory protein, C terminal JM955_RS22710 PF00072 Response regulator receiver domain JM955_RS22715 PF09269 Domain of unknown function (DUF1967) JM955_RS22715 PF01926 50S ribosome-binding GTPase JM955_RS22715 PF01018 GTP1/OBG JM955_RS22720 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JM955_RS22720 PF14682 Sporulation initiation phospho-transferase B, C-terminal JM955_RS22725 PF01016 Ribosomal L27 protein JM955_RS22730 PF04327 Cysteine protease Prp JM955_RS22735 PF00829 Ribosomal prokaryotic L21 protein JM955_RS22740 PF00575 S1 RNA binding domain JM955_RS22740 PF10150 Ribonuclease E/G family JM955_RS22745 PF02163 Peptidase family M50 JM955_RS22750 PF01551 Peptidase family M23 JM955_RS22755 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JM955_RS22760 PF03775 Septum formation inhibitor MinC, C-terminal domain JM955_RS22770 PF04085 rod shape-determining protein MreC JM955_RS22780 PF04002 RadC-like JAB domain JM955_RS22785 PF02545 Maf-like protein JM955_RS22795 PF08245 Mur ligase middle domain JM955_RS22795 PF02875 Mur ligase family, glutamate ligase domain JM955_RS22800 PF08264 Anticodon-binding domain of tRNA JM955_RS22800 PF10458 Valyl tRNA synthetase tRNA binding arm JM955_RS22800 PF00133 tRNA synthetases class I (I, L, M and V) JM955_RS22810 PF01476 LysM domain JM955_RS22815 PF00202 Aminotransferase class-III JM955_RS22820 PF00490 Delta-aminolevulinic acid dehydratase JM955_RS22825 PF02602 Uroporphyrinogen-III synthase HemD JM955_RS22830 PF03900 Porphobilinogen deaminase, C-terminal domain JM955_RS22830 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JM955_RS22835 PF01578 Cytochrome C assembly protein JM955_RS22840 PF01488 Shikimate / quinate 5-dehydrogenase JM955_RS22840 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JM955_RS22840 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JM955_RS22845 PF01047 MarR family JM955_RS22850 PF02566 OsmC-like protein JM955_RS22855 PF01926 50S ribosome-binding GTPase JM955_RS22860 PF00004 ATPase family associated with various cellular activities (AAA) JM955_RS22860 PF05362 Lon protease (S16) C-terminal proteolytic domain JM955_RS22860 PF02190 ATP-dependent protease La (LON) substrate-binding domain JM955_RS22865 PF00004 ATPase family associated with various cellular activities (AAA) JM955_RS22865 PF05362 Lon protease (S16) C-terminal proteolytic domain JM955_RS22870 PF07724 AAA domain (Cdc48 subfamily) JM955_RS22870 PF06689 ClpX C4-type zinc finger JM955_RS22870 PF10431 C-terminal, D2-small domain, of ClpB protein JM955_RS22875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JM955_RS22875 PF05698 Bacterial trigger factor protein (TF) C-terminus JM955_RS22875 PF05697 Bacterial trigger factor protein (TF) JM955_RS22890 PF08000 Bacterial PH domain JM955_RS22890 PF11724 YvbH-like oligomerisation region JM955_RS22910 PF12850 Calcineurin-like phosphoesterase superfamily domain JM955_RS22915 PF01725 Ham1 family JM955_RS22920 PF01138 3' exoribonuclease family, domain 1 JM955_RS22920 PF03725 3' exoribonuclease family, domain 2 JM955_RS22925 PF10646 Sporulation and spore germination JM955_RS22930 PF01177 Asp/Glu/Hydantoin racemase JM955_RS22935 PF07690 Major Facilitator Superfamily JM955_RS22945 PF00440 Bacterial regulatory proteins, tetR family JM955_RS22955 PF00196 Bacterial regulatory proteins, luxR family JM955_RS22960 PF00860 Permease family JM955_RS22965 PF07969 Amidohydrolase family JM955_RS22970 PF04024 PspC domain JM955_RS22975 PF01381 Helix-turn-helix JM955_RS22975 PF07883 Cupin domain JM955_RS22980 PF13536 Putative multidrug resistance efflux transporter JM955_RS22985 PF00230 Major intrinsic protein JM955_RS22990 PF02082 Transcriptional regulator JM955_RS23000 PF13732 Domain of unknown function (DUF4162) JM955_RS23000 PF00005 ABC transporter JM955_RS23005 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JM955_RS23010 PF13677 Membrane MotB of proton-channel complex MotA/MotB JM955_RS23010 PF00691 OmpA family JM955_RS23015 PF01618 MotA/TolQ/ExbB proton channel family JM955_RS23020 PF02557 D-alanyl-D-alanine carboxypeptidase JM955_RS23025 PF03061 Thioesterase superfamily JM955_RS23030 PF13085 2Fe-2S iron-sulfur cluster binding domain JM955_RS23030 PF13183 4Fe-4S dicluster domain JM955_RS23035 PF00890 FAD binding domain JM955_RS23035 PF02910 Fumarate reductase flavoprotein C-term JM955_RS23040 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JM955_RS23045 PF10702 Protein of unknown function (DUF2507) JM955_RS23050 PF08459 UvrC Helix-hairpin-helix N-terminal JM955_RS23050 PF02151 UvrB/uvrC motif JM955_RS23050 PF01541 GIY-YIG catalytic domain JM955_RS23055 PF00085 Thioredoxin JM955_RS23060 PF00766 Electron transfer flavoprotein FAD-binding domain JM955_RS23060 PF01012 Electron transfer flavoprotein domain JM955_RS23065 PF01012 Electron transfer flavoprotein domain JM955_RS23070 PF00378 Enoyl-CoA hydratase/isomerase JM955_RS23075 PF00440 Bacterial regulatory proteins, tetR family JM955_RS23075 PF08359 YsiA-like protein, C-terminal region JM955_RS23080 PF13193 AMP-binding enzyme C-terminal domain JM955_RS23080 PF00501 AMP-binding enzyme JM955_RS23090 PF01497 Periplasmic binding protein JM955_RS23095 PF01032 FecCD transport family JM955_RS23105 PF05163 DinB family JM955_RS23135 PF00005 ABC transporter JM955_RS23140 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS23140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS23145 PF00072 Response regulator receiver domain JM955_RS23145 PF00486 Transcriptional regulatory protein, C terminal JM955_RS23155 PF09962 Uncharacterized conserved protein (DUF2196) JM955_RS23160 PF17785 PUA-like domain JM955_RS23160 PF10672 S-adenosylmethionine-dependent methyltransferase JM955_RS23165 PF03992 Antibiotic biosynthesis monooxygenase JM955_RS23170 PF04203 Sortase domain JM955_RS23175 PF00005 ABC transporter JM955_RS23180 PF01032 FecCD transport family JM955_RS23185 PF01497 Periplasmic binding protein JM955_RS23190 PF05031 Iron Transport-associated domain JM955_RS23200 PF05031 Iron Transport-associated domain JM955_RS23205 PF05525 Branched-chain amino acid transport protein JM955_RS23210 PF00849 RNA pseudouridylate synthase JM955_RS23210 PF01479 S4 domain JM955_RS23215 PF01713 Smr domain JM955_RS23215 PF00488 MutS domain V JM955_RS23220 PF14791 DNA polymerase beta thumb JM955_RS23220 PF02811 PHP domain JM955_RS23220 PF14716 Helix-hairpin-helix domain JM955_RS23225 PF02674 Colicin V production protein JM955_RS23230 PF05164 Cell division protein ZapA JM955_RS23235 PF11858 Domain of unknown function (DUF3378) JM955_RS23235 PF01351 Ribonuclease HII JM955_RS23255 PF00152 tRNA synthetases class II (D, K and N) JM955_RS23255 PF01336 OB-fold nucleic acid binding domain JM955_RS23260 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JM955_RS23260 PF01588 Putative tRNA binding domain JM955_RS23260 PF03483 B3/4 domain JM955_RS23260 PF03147 Ferredoxin-fold anticodon binding domain JM955_RS23260 PF03484 tRNA synthetase B5 domain JM955_RS23265 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JM955_RS23265 PF01409 tRNA synthetases class II core domain (F) JM955_RS23270 PF08032 RNA 2'-O ribose methyltransferase substrate binding JM955_RS23270 PF00588 SpoU rRNA Methylase family JM955_RS23275 PF14098 Small, acid-soluble spore protein I JM955_RS23280 PF01966 HD domain JM955_RS23300 PF07690 Major Facilitator Superfamily JM955_RS23310 PF16859 Tetracyclin repressor-like, C-terminal domain JM955_RS23310 PF00440 Bacterial regulatory proteins, tetR family JM955_RS23315 PF05343 M42 glutamyl aminopeptidase JM955_RS23325 PF00453 Ribosomal protein L20 JM955_RS23330 PF01632 Ribosomal protein L35 JM955_RS23335 PF05198 Translation initiation factor IF-3, N-terminal domain JM955_RS23335 PF00707 Translation initiation factor IF-3, C-terminal domain JM955_RS23340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JM955_RS23340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JM955_RS23340 PF02824 TGS domain JM955_RS23340 PF03129 Anticodon binding domain JM955_RS23345 PF08812 YtxC-like family JM955_RS23355 PF07319 Primosomal protein DnaI N-terminus JM955_RS23355 PF01695 IstB-like ATP binding protein JM955_RS23360 PF07261 Replication initiation and membrane attachment JM955_RS23365 PF03477 ATP cone domain JM955_RS23370 PF02675 S-adenosylmethionine decarboxylase JM955_RS23375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JM955_RS23375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JM955_RS23380 PF01121 Dephospho-CoA kinase JM955_RS23385 PF02659 Putative manganese efflux pump JM955_RS23390 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JM955_RS23390 PF06827 Zinc finger found in FPG and IleRS JM955_RS23390 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JM955_RS23395 PF01367 5'-3' exonuclease, C-terminal SAM fold JM955_RS23395 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JM955_RS23395 PF00476 DNA polymerase family A JM955_RS23400 PF00989 PAS fold JM955_RS23400 PF16736 Single Cache-like JM955_RS23400 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS23400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS23405 PF00486 Transcriptional regulatory protein, C terminal JM955_RS23405 PF00072 Response regulator receiver domain JM955_RS23420 PF00056 lactate/malate dehydrogenase, NAD binding domain JM955_RS23420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JM955_RS23425 PF00180 Isocitrate/isopropylmalate dehydrogenase JM955_RS23430 PF00285 Citrate synthase, C-terminal domain JM955_RS23435 PF04284 Protein of unknown function (DUF441) JM955_RS23440 PF01594 AI-2E family transporter JM955_RS23445 PF04186 FxsA cytoplasmic membrane protein JM955_RS23450 PF00391 PEP-utilising enzyme, mobile domain JM955_RS23450 PF00224 Pyruvate kinase, barrel domain JM955_RS23450 PF02887 Pyruvate kinase, alpha/beta domain JM955_RS23455 PF00365 Phosphofructokinase JM955_RS23460 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JM955_RS23465 PF01039 Carboxyl transferase domain JM955_RS23465 PF17848 Acetyl-coA carboxylase zinc finger domain JM955_RS23470 PF00392 Bacterial regulatory proteins, gntR family JM955_RS23475 PF00390 Malic enzyme, N-terminal domain JM955_RS23475 PF03949 Malic enzyme, NAD binding domain JM955_RS23480 PF02811 PHP domain JM955_RS23480 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JM955_RS23480 PF07733 Bacterial DNA polymerase III alpha NTPase domain JM955_RS23480 PF14579 Helix-hairpin-helix motif JM955_RS23480 PF01336 OB-fold nucleic acid binding domain JM955_RS23485 PF14034 Sporulation protein YtrH JM955_RS23495 PF02272 DHHA1 domain JM955_RS23495 PF01368 DHH family JM955_RS23500 PF14007 YtpI-like protein JM955_RS23510 PF07085 DRTGG domain JM955_RS23510 PF00392 Bacterial regulatory proteins, gntR family JM955_RS23510 PF00571 CBS domain JM955_RS23510 PF03061 Thioesterase superfamily JM955_RS23525 PF01321 Creatinase/Prolidase N-terminal domain JM955_RS23525 PF00557 Metallopeptidase family M24 JM955_RS23565 PF12746 GNAT acetyltransferase JM955_RS23570 PF07883 Cupin domain JM955_RS23580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JM955_RS23580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JM955_RS23590 PF00582 Universal stress protein family JM955_RS23610 PF14698 Argininosuccinate lyase C-terminal JM955_RS23610 PF00206 Lyase JM955_RS23615 PF00764 Arginosuccinate synthase JM955_RS23630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS23630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JM955_RS23635 PF12787 EcsC protein family JM955_RS23650 PF00871 Acetokinase family JM955_RS23655 PF02384 N-6 DNA Methylase JM955_RS23660 PF08534 Redoxin JM955_RS23665 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JM955_RS23675 PF01513 ATP-NAD kinase JM955_RS23680 PF07969 Amidohydrolase family JM955_RS23690 PF13193 AMP-binding enzyme C-terminal domain JM955_RS23690 PF00501 AMP-binding enzyme JM955_RS23695 PF00269 Small, acid-soluble spore proteins, alpha/beta type JM955_RS23700 PF02568 Thiamine biosynthesis protein (ThiI) JM955_RS23700 PF02926 THUMP domain JM955_RS23705 PF00266 Aminotransferase class-V JM955_RS23725 PF00005 ABC transporter JM955_RS23740 PF00005 ABC transporter JM955_RS23745 PF06160 Septation ring formation regulator, EzrA JM955_RS23750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS23750 PF03466 LysR substrate binding domain JM955_RS23755 PF00892 EamA-like transporter family JM955_RS23760 PF00440 Bacterial regulatory proteins, tetR family JM955_RS23765 PF13185 GAF domain JM955_RS23770 PF01053 Cys/Met metabolism PLP-dependent enzyme JM955_RS23775 PF01479 S4 domain JM955_RS23775 PF00163 Ribosomal protein S4/S9 N-terminal domain JM955_RS23790 PF00579 tRNA synthetases class I (W and Y) JM955_RS23790 PF01479 S4 domain JM955_RS23800 PF08281 Sigma-70, region 4 JM955_RS23800 PF04542 Sigma-70 region 2 JM955_RS23810 PF12464 Maltose acetyltransferase JM955_RS23810 PF14602 Hexapeptide repeat of succinyl-transferase JM955_RS23815 PF00501 AMP-binding enzyme JM955_RS23815 PF13193 AMP-binding enzyme C-terminal domain JM955_RS23820 PF00583 Acetyltransferase (GNAT) family JM955_RS23825 PF00571 CBS domain JM955_RS23830 PF00850 Histone deacetylase domain JM955_RS23835 PF00561 alpha/beta hydrolase fold JM955_RS23845 PF00072 Response regulator receiver domain JM955_RS23845 PF00486 Transcriptional regulatory protein, C terminal JM955_RS23850 PF00989 PAS fold JM955_RS23850 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS23850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS23850 PF16736 Single Cache-like JM955_RS23855 PF12796 Ankyrin repeats (3 copies) JM955_RS23860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JM955_RS23865 PF01741 Large-conductance mechanosensitive channel, MscL JM955_RS23885 PF00356 Bacterial regulatory proteins, lacI family JM955_RS23895 PF07537 CamS sex pheromone cAM373 precursor JM955_RS23900 PF11009 Protein of unknown function (DUF2847) JM955_RS23910 PF02073 Thermophilic metalloprotease (M29) JM955_RS23925 PF13302 Acetyltransferase (GNAT) domain JM955_RS23930 PF00892 EamA-like transporter family JM955_RS23935 PF13411 MerR HTH family regulatory protein JM955_RS23940 PF01225 Mur ligase family, catalytic domain JM955_RS23940 PF08245 Mur ligase middle domain JM955_RS23940 PF02875 Mur ligase family, glutamate ligase domain JM955_RS23950 PF09397 Ftsk gamma domain JM955_RS23950 PF17854 FtsK alpha domain JM955_RS23950 PF01580 FtsK/SpoIIIE family JM955_RS23955 PF01520 N-acetylmuramoyl-L-alanine amidase JM955_RS23965 PF14794 Domain of unknown function (DUF4479) JM955_RS23965 PF01588 Putative tRNA binding domain JM955_RS23970 PF07285 Protein of unknown function (DUF1444) JM955_RS23975 PF00085 Thioredoxin JM955_RS23980 PF01931 Protein of unknown function DUF84 JM955_RS23985 PF05343 M42 glutamyl aminopeptidase JM955_RS23995 PF00753 Metallo-beta-lactamase superfamily JM955_RS24000 PF02390 Putative methyltransferase JM955_RS24005 PF14165 YtzH-like protein JM955_RS24010 PF01636 Phosphotransferase enzyme family JM955_RS24015 PF00128 Alpha amylase, catalytic domain JM955_RS24015 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JM955_RS24015 PF17999 Pullulanase N1-terminal domain JM955_RS24020 PF02834 LigT like Phosphoesterase JM955_RS24025 PF01546 Peptidase family M20/M25/M40 JM955_RS24030 PF08220 DeoR-like helix-turn-helix domain JM955_RS24035 PF00849 RNA pseudouridylate synthase JM955_RS24035 PF01479 S4 domain JM955_RS24040 PF01943 Polysaccharide biosynthesis protein JM955_RS24040 PF14667 Polysaccharide biosynthesis C-terminal domain JM955_RS24050 PF07690 Major Facilitator Superfamily JM955_RS24055 PF01022 Bacterial regulatory protein, arsR family JM955_RS24060 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JM955_RS24070 PF10957 Sporulation protein Cse60 JM955_RS24080 PF02559 CarD-like/TRCF domain JM955_RS24090 PF06800 Sugar transport protein JM955_RS24105 PF02391 MoaE protein JM955_RS24110 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JM955_RS24115 PF00994 Probable molybdopterin binding domain JM955_RS24115 PF03454 MoeA C-terminal region (domain IV) JM955_RS24115 PF03453 MoeA N-terminal region (domain I and II) JM955_RS24120 PF01967 MoaC family JM955_RS24125 PF00899 ThiF family JM955_RS24130 PF06463 Molybdenum Cofactor Synthesis C JM955_RS24130 PF04055 Radical SAM superfamily JM955_RS24150 PF00581 Rhodanese-like domain JM955_RS24160 PF00561 alpha/beta hydrolase fold JM955_RS24165 PF03323 Bacillus/Clostridium GerA spore germination protein JM955_RS24175 PF05504 Spore germination B3/ GerAC like, C-terminal JM955_RS24195 PF08264 Anticodon-binding domain of tRNA JM955_RS24195 PF09334 tRNA synthetases class I (M) JM955_RS24195 PF00133 tRNA synthetases class I (I, L, M and V) JM955_RS24195 PF13603 Leucyl-tRNA synthetase, Domain 2 JM955_RS24200 PF07690 Major Facilitator Superfamily JM955_RS24205 PF00999 Sodium/hydrogen exchanger family JM955_RS24210 PF02080 TrkA-C domain JM955_RS24215 PF00589 Phage integrase family JM955_RS24225 PF00005 ABC transporter JM955_RS24230 PF04235 Protein of unknown function (DUF418) JM955_RS24230 PF07786 Protein of unknown function (DUF1624) JM955_RS24240 PF10732 Protein of unknown function (DUF2524) JM955_RS24245 PF04055 Radical SAM superfamily JM955_RS24245 PF16199 Radical_SAM C-terminal domain JM955_RS24250 PF06962 Putative rRNA methylase JM955_RS24255 PF00005 ABC transporter JM955_RS24265 PF01177 Asp/Glu/Hydantoin racemase JM955_RS24280 PF10776 Protein of unknown function (DUF2600) JM955_RS24285 PF12146 Serine aminopeptidase, S33 JM955_RS24290 PF00132 Bacterial transferase hexapeptide (six repeats) JM955_RS24295 PF01569 PAP2 superfamily JM955_RS24300 PF13439 Glycosyltransferase Family 4 JM955_RS24300 PF00534 Glycosyl transferases group 1 JM955_RS24305 PF12804 MobA-like NTP transferase domain JM955_RS24310 PF00994 Probable molybdopterin binding domain JM955_RS24320 PF02773 S-adenosylmethionine synthetase, C-terminal domain JM955_RS24320 PF02772 S-adenosylmethionine synthetase, central domain JM955_RS24320 PF00438 S-adenosylmethionine synthetase, N-terminal domain JM955_RS24325 PF01293 Phosphoenolpyruvate carboxykinase JM955_RS24385 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS24385 PF00989 PAS fold JM955_RS24385 PF13188 PAS domain JM955_RS24385 PF13426 PAS domain JM955_RS24385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS24390 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS24390 PF02743 Cache domain JM955_RS24390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS24395 PF18011 C-terminal domain found in long catalases JM955_RS24395 PF06628 Catalase-related immune-responsive JM955_RS24395 PF00199 Catalase JM955_RS24400 PF00561 alpha/beta hydrolase fold JM955_RS24400 PF08386 TAP-like protein JM955_RS24405 PF00884 Sulfatase JM955_RS24435 PF00005 ABC transporter JM955_RS24440 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS24455 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS24465 PF00293 NUDIX domain JM955_RS24495 PF02664 S-Ribosylhomocysteinase (LuxS) JM955_RS24500 PF01809 Putative membrane protein insertion efficiency factor JM955_RS24505 PF00484 Carbonic anhydrase JM955_RS24510 PF01654 Cytochrome bd terminal oxidase subunit I JM955_RS24515 PF02322 Cytochrome bd terminal oxidase subunit II JM955_RS24520 PF10676 Spore germination protein gerPA/gerPF JM955_RS24530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS24530 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JM955_RS24550 PF04012 PspA/IM30 family JM955_RS24565 PF02421 Ferrous iron transport protein B JM955_RS24565 PF07664 Ferrous iron transport protein B C terminus JM955_RS24565 PF07670 Nucleoside recognition JM955_RS24565 PF17910 FeoB cytosolic helical domain JM955_RS24575 PF09515 Thiamine transporter protein (Thia_YuaJ) JM955_RS24580 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS24580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS24580 PF00672 HAMP domain JM955_RS24585 PF00072 Response regulator receiver domain JM955_RS24585 PF00486 Transcriptional regulatory protein, C terminal JM955_RS24610 PF00156 Phosphoribosyl transferase domain JM955_RS24615 PF00781 Diacylglycerol kinase catalytic domain JM955_RS24645 PF09335 SNARE associated Golgi protein JM955_RS24650 PF00398 Ribosomal RNA adenine dimethylase JM955_RS24655 PF02687 FtsX-like permease family JM955_RS24660 PF00005 ABC transporter JM955_RS24665 PF06445 GyrI-like small molecule binding domain JM955_RS24665 PF12833 Helix-turn-helix domain JM955_RS24675 PF13630 SdpI/YhfL protein family JM955_RS24675 PF07853 Protein of unknown function (DUF1648) JM955_RS24680 PF01022 Bacterial regulatory protein, arsR family JM955_RS24685 PF00486 Transcriptional regulatory protein, C terminal JM955_RS24685 PF00072 Response regulator receiver domain JM955_RS24690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS24695 PF02687 FtsX-like permease family JM955_RS24700 PF02687 FtsX-like permease family JM955_RS24705 PF00005 ABC transporter JM955_RS24710 PF02687 FtsX-like permease family JM955_RS24720 PF13977 BetI-type transcriptional repressor, C-terminal JM955_RS24720 PF00440 Bacterial regulatory proteins, tetR family JM955_RS24730 PF02447 GntP family permease JM955_RS24735 PF07702 UTRA domain JM955_RS24735 PF00392 Bacterial regulatory proteins, gntR family JM955_RS24745 PF07071 KDGP aldolase JM955_RS24750 PF03841 L-seryl-tRNA selenium transferase JM955_RS24755 PF01979 Amidohydrolase family JM955_RS24760 PF02557 D-alanyl-D-alanine carboxypeptidase JM955_RS24765 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS24765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS24770 PF00072 Response regulator receiver domain JM955_RS24770 PF00486 Transcriptional regulatory protein, C terminal JM955_RS24775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JM955_RS24775 PF13378 Enolase C-terminal domain-like JM955_RS24780 PF13193 AMP-binding enzyme C-terminal domain JM955_RS24780 PF00501 AMP-binding enzyme JM955_RS24785 PF00378 Enoyl-CoA hydratase/isomerase JM955_RS24790 PF00561 alpha/beta hydrolase fold JM955_RS24795 PF16582 Middle domain of thiamine pyrophosphate JM955_RS24795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JM955_RS24795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JM955_RS24800 PF00425 chorismate binding enzyme JM955_RS24805 PF01040 UbiA prenyltransferase family JM955_RS24810 PF01258 Prokaryotic dksA/traR C4-type zinc finger JM955_RS24815 PF00313 'Cold-shock' DNA-binding domain JM955_RS24840 PF00343 Carbohydrate phosphorylase JM955_RS24845 PF08323 Starch synthase catalytic domain JM955_RS24845 PF00534 Glycosyl transferases group 1 JM955_RS24850 PF00483 Nucleotidyl transferase JM955_RS24855 PF00483 Nucleotidyl transferase JM955_RS24860 PF00128 Alpha amylase, catalytic domain JM955_RS24860 PF02806 Alpha amylase, C-terminal all-beta domain JM955_RS24860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JM955_RS24870 PF05922 Peptidase inhibitor I9 JM955_RS24870 PF02225 PA domain JM955_RS24870 PF13860 FlgD Ig-like domain JM955_RS24870 PF00082 Subtilase family JM955_RS24875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JM955_RS24875 PF00056 lactate/malate dehydrogenase, NAD binding domain JM955_RS25005 PF02308 MgtC family JM955_RS25010 PF07885 Ion channel JM955_RS25010 PF02254 TrkA-N domain JM955_RS25015 PF08868 YugN-like family JM955_RS25020 PF00342 Phosphoglucose isomerase JM955_RS25025 PF04070 Domain of unknown function (DUF378) JM955_RS25030 PF00575 S1 RNA binding domain JM955_RS25035 PF00155 Aminotransferase class I and II JM955_RS25040 PF01037 Lrp/AsnC ligand binding domain JM955_RS25045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JM955_RS25045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JM955_RS25050 PF08386 TAP-like protein JM955_RS25050 PF00561 alpha/beta hydrolase fold JM955_RS25060 PF00155 Aminotransferase class I and II JM955_RS25075 PF08810 Kinase associated protein B JM955_RS25080 PF00929 Exonuclease JM955_RS25085 PF03600 Citrate transporter JM955_RS25100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JM955_RS25100 PF03129 Anticodon binding domain JM955_RS25105 PF03061 Thioesterase superfamily JM955_RS25115 PF02632 BioY family JM955_RS25125 PF00483 Nucleotidyl transferase JM955_RS25130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JM955_RS25130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JM955_RS25130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JM955_RS25130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JM955_RS25135 PF02457 DisA bacterial checkpoint controller nucleotide-binding JM955_RS25135 PF10372 Bacterial membrane-spanning protein N-terminus JM955_RS25150 PF00892 EamA-like transporter family JM955_RS25155 PF01040 UbiA prenyltransferase family JM955_RS25160 PF00883 Cytosol aminopeptidase family, catalytic domain JM955_RS25160 PF02789 Cytosol aminopeptidase family, N-terminal domain JM955_RS25165 PF06725 3D domain JM955_RS25175 PF00293 NUDIX domain JM955_RS25175 PF13344 Haloacid dehalogenase-like hydrolase JM955_RS25180 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS25185 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS25190 PF06445 GyrI-like small molecule binding domain JM955_RS25205 PF04463 Protein of unknown function (DUF523) JM955_RS25215 PF01596 O-methyltransferase JM955_RS25235 PF01521 Iron-sulphur cluster biosynthesis JM955_RS25240 PF01678 Diaminopimelate epimerase JM955_RS25245 PF07293 Protein of unknown function (DUF1450) JM955_RS25250 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS25260 PF00005 ABC transporter JM955_RS25260 PF09383 NIL domain JM955_RS25265 PF03649 Uncharacterised protein family (UPF0014) JM955_RS25270 PF08274 PhnA Zinc-Ribbon JM955_RS25270 PF03831 PhnA domain JM955_RS25290 PF01909 Nucleotidyltransferase domain JM955_RS25290 PF13427 Domain of unknown function (DUF4111) JM955_RS25295 PF07315 Protein of unknown function (DUF1462) JM955_RS25300 PF01106 NifU-like domain JM955_RS25315 PF04608 Phosphatidylglycerophosphatase A JM955_RS25335 PF11202 Phosphoribosyl transferase (PRTase) JM955_RS25335 PF15608 PELOTA RNA binding domain JM955_RS25345 PF02525 Flavodoxin-like fold JM955_RS25350 PF13344 Haloacid dehalogenase-like hydrolase JM955_RS25360 PF01934 Protein of unknown function DUF86 JM955_RS25365 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JM955_RS25385 PF06265 Protein of unknown function (DUF1027) JM955_RS25390 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JM955_RS25395 PF07739 TipAS antibiotic-recognition domain JM955_RS25395 PF13411 MerR HTH family regulatory protein JM955_RS25400 PF10086 YhfC intramembrane metalloprotease JM955_RS25420 PF04055 Radical SAM superfamily JM955_RS25420 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JM955_RS25425 PF01551 Peptidase family M23 JM955_RS25430 PF09560 Sporulation protein YunB (Spo_YunB) JM955_RS25435 PF08827 Domain of unknown function (DUF1805) JM955_RS25440 PF02872 5'-nucleotidase, C-terminal domain JM955_RS25445 PF01458 Uncharacterized protein family (UPF0051) JM955_RS25450 PF01592 NifU-like N terminal domain JM955_RS25455 PF00266 Aminotransferase class-V JM955_RS25460 PF01458 Uncharacterized protein family (UPF0051) JM955_RS25465 PF00005 ABC transporter JM955_RS25470 PF03180 NLPA lipoprotein JM955_RS25475 PF03180 NLPA lipoprotein JM955_RS25480 PF00528 Binding-protein-dependent transport system inner membrane component JM955_RS25485 PF09383 NIL domain JM955_RS25485 PF00005 ABC transporter JM955_RS25495 PF00085 Thioredoxin JM955_RS25500 PF01751 Toprim domain JM955_RS25505 PF01597 Glycine cleavage H-protein JM955_RS25510 PF03960 ArsC family JM955_RS25545 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JM955_RS25545 PF00056 lactate/malate dehydrogenase, NAD binding domain JM955_RS25565 PF00440 Bacterial regulatory proteins, tetR family JM955_RS25565 PF13305 Tetracyclin repressor-like, C-terminal domain JM955_RS25570 PF00753 Metallo-beta-lactamase superfamily JM955_RS25575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM955_RS25575 PF02770 Acyl-CoA dehydrogenase, middle domain JM955_RS25575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM955_RS25580 PF02803 Thiolase, C-terminal domain JM955_RS25580 PF00108 Thiolase, N-terminal domain JM955_RS25585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JM955_RS25585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JM955_RS25585 PF00378 Enoyl-CoA hydratase/isomerase JM955_RS25590 PF14115 YuzL-like protein JM955_RS25595 PF07943 Penicillin-binding protein 5, C-terminal domain JM955_RS25595 PF00768 D-alanyl-D-alanine carboxypeptidase JM955_RS25600 PF01619 Proline dehydrogenase JM955_RS25605 PF10835 Protein of unknown function (DUF2573) JM955_RS25610 PF01910 Thiamine-binding protein JM955_RS25615 PF00672 HAMP domain JM955_RS25615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS25615 PF02743 Cache domain JM955_RS25630 PF07690 Major Facilitator Superfamily JM955_RS25635 PF13520 Amino acid permease JM955_RS25650 PF02096 60Kd inner membrane protein JM955_RS25660 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JM955_RS25660 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JM955_RS25695 PF09335 SNARE associated Golgi protein JM955_RS25705 PF17969 L,D-transpeptidase C-terminal domain JM955_RS25705 PF03734 L,D-transpeptidase catalytic domain JM955_RS25710 PF00486 Transcriptional regulatory protein, C terminal JM955_RS25710 PF00072 Response regulator receiver domain JM955_RS25715 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS25715 PF16736 Single Cache-like JM955_RS25715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS25715 PF00989 PAS fold JM955_RS25730 PF08264 Anticodon-binding domain of tRNA JM955_RS25730 PF09334 tRNA synthetases class I (M) JM955_RS25740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS25740 PF02743 Cache domain JM955_RS25740 PF00672 HAMP domain JM955_RS25745 PF02743 Cache domain JM955_RS25745 PF00672 HAMP domain JM955_RS25745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS25750 PF01883 Iron-sulfur cluster assembly protein JM955_RS25755 PF02868 Thermolysin metallopeptidase, alpha-helical domain JM955_RS25755 PF01447 Thermolysin metallopeptidase, catalytic domain JM955_RS25755 PF03413 Peptidase propeptide and YPEB domain JM955_RS25755 PF07504 Fungalysin/Thermolysin Propeptide Motif JM955_RS25760 PF02678 Pirin JM955_RS25760 PF17954 Quercetinase C-terminal cupin domain JM955_RS25765 PF01047 MarR family JM955_RS25775 PF09335 SNARE associated Golgi protein JM955_RS25780 PF00999 Sodium/hydrogen exchanger family JM955_RS25785 PF02080 TrkA-C domain JM955_RS25790 PF01235 Sodium:alanine symporter family JM955_RS25795 PF00210 Ferritin-like domain JM955_RS25805 PF05163 DinB family JM955_RS25815 PF03641 Possible lysine decarboxylase JM955_RS25825 PF00210 Ferritin-like domain JM955_RS25830 PF07786 Protein of unknown function (DUF1624) JM955_RS25830 PF04235 Protein of unknown function (DUF418) JM955_RS25835 PF01773 Na+ dependent nucleoside transporter N-terminus JM955_RS25835 PF07662 Na+ dependent nucleoside transporter C-terminus JM955_RS25840 PF07662 Na+ dependent nucleoside transporter C-terminus JM955_RS25840 PF01773 Na+ dependent nucleoside transporter N-terminus JM955_RS25845 PF01235 Sodium:alanine symporter family JM955_RS25850 PF01235 Sodium:alanine symporter family JM955_RS25855 PF13460 NAD(P)H-binding JM955_RS25870 PF00248 Aldo/keto reductase family JM955_RS25875 PF07690 Major Facilitator Superfamily JM955_RS25880 PF01638 HxlR-like helix-turn-helix JM955_RS25885 PF07849 Protein of unknown function (DUF1641) JM955_RS25890 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS25895 PF01479 S4 domain JM955_RS25895 PF00579 tRNA synthetases class I (W and Y) JM955_RS25900 PF01565 FAD binding domain JM955_RS25900 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JM955_RS25920 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JM955_RS25925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JM955_RS25940 PF13302 Acetyltransferase (GNAT) domain JM955_RS25945 PF06146 Phosphate-starvation-inducible E JM955_RS25955 PF00857 Isochorismatase family JM955_RS25960 PF01037 Lrp/AsnC ligand binding domain JM955_RS25970 PF01037 Lrp/AsnC ligand binding domain JM955_RS25975 PF00484 Carbonic anhydrase JM955_RS25980 PF02560 Cyanate lyase C-terminal domain JM955_RS25985 PF00860 Permease family JM955_RS25990 PF17440 Thiol-activated cytolysin beta sandwich domain JM955_RS25990 PF01289 Thiol-activated cytolysin JM955_RS25995 PF00005 ABC transporter JM955_RS26000 PF01032 FecCD transport family JM955_RS26005 PF01032 FecCD transport family JM955_RS26015 PF00072 Response regulator receiver domain JM955_RS26015 PF00486 Transcriptional regulatory protein, C terminal JM955_RS26025 PF01668 SmpB protein JM955_RS26030 PF00773 RNB domain JM955_RS26030 PF17876 Cold shock domain JM955_RS26030 PF00575 S1 RNA binding domain JM955_RS26030 PF08206 Ribonuclease B OB domain JM955_RS26035 PF12146 Serine aminopeptidase, S33 JM955_RS26040 PF03840 Preprotein translocase SecG subunit JM955_RS26045 PF04172 LrgB-like family JM955_RS26050 PF03788 LrgA family JM955_RS26060 PF03952 Enolase, N-terminal domain JM955_RS26060 PF00113 Enolase, C-terminal TIM barrel domain JM955_RS26065 PF01676 Metalloenzyme superfamily JM955_RS26065 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JM955_RS26070 PF00121 Triosephosphate isomerase JM955_RS26075 PF00162 Phosphoglycerate kinase JM955_RS26080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JM955_RS26080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JM955_RS26085 PF04198 Putative sugar-binding domain JM955_RS26095 PF04963 Sigma-54 factor, core binding domain JM955_RS26095 PF04552 Sigma-54, DNA binding domain JM955_RS26095 PF00309 Sigma-54 factor, Activator interacting domain (AID) JM955_RS26110 PF00005 ABC transporter JM955_RS26110 PF13732 Domain of unknown function (DUF4162) JM955_RS26115 PF07730 Histidine kinase JM955_RS26115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS26120 PF00196 Bacterial regulatory proteins, luxR family JM955_RS26120 PF00072 Response regulator receiver domain JM955_RS26150 PF02899 Phage integrase, N-terminal SAM-like domain JM955_RS26150 PF00589 Phage integrase family JM955_RS26170 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JM955_RS26175 PF07451 Stage V sporulation protein AD (SpoVAD) JM955_RS26180 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JM955_RS26190 PF04239 Protein of unknown function (DUF421) JM955_RS26195 PF00574 Clp protease JM955_RS26200 PF00381 PTS HPr component phosphorylation site JM955_RS26205 PF10298 WhiA N-terminal LAGLIDADG-like domain JM955_RS26205 PF02650 WhiA C-terminal HTH domain JM955_RS26205 PF14527 WhiA LAGLIDADG-like domain JM955_RS26210 PF01933 Uncharacterised protein family UPF0052 JM955_RS26215 PF03668 P-loop ATPase protein family JM955_RS26220 PF00293 NUDIX domain JM955_RS26230 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM955_RS26240 PF14602 Hexapeptide repeat of succinyl-transferase JM955_RS26245 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS26250 PF01790 Prolipoprotein diacylglyceryl transferase JM955_RS26255 PF07475 HPr Serine kinase C-terminal domain JM955_RS26255 PF02603 HPr Serine kinase N terminus JM955_RS26260 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JM955_RS26265 PF17760 UvrA interaction domain JM955_RS26265 PF00005 ABC transporter JM955_RS26265 PF17755 UvrA DNA-binding domain JM955_RS26270 PF12344 Ultra-violet resistance protein B JM955_RS26270 PF02151 UvrB/uvrC motif JM955_RS26270 PF04851 Type III restriction enzyme, res subunit JM955_RS26270 PF00271 Helicase conserved C-terminal domain JM955_RS26270 PF17757 UvrB interaction domain JM955_RS26285 PF13411 MerR HTH family regulatory protein JM955_RS26285 PF07739 TipAS antibiotic-recognition domain JM955_RS26300 PF03601 Conserved hypothetical protein 698 JM955_RS26305 PF03466 LysR substrate binding domain JM955_RS26305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS26310 PF09278 MerR, DNA binding JM955_RS26310 PF00376 MerR family regulatory protein JM955_RS26315 PF03358 NADPH-dependent FMN reductase JM955_RS26320 PF12848 ABC transporter JM955_RS26320 PF00005 ABC transporter JM955_RS26320 PF16326 ABC transporter C-terminal domain JM955_RS26325 PF01906 Putative heavy-metal-binding JM955_RS26330 PF00005 ABC transporter JM955_RS26330 PF00664 ABC transporter transmembrane region JM955_RS26335 PF17820 PDZ domain JM955_RS26340 PF17820 PDZ domain JM955_RS26340 PF01471 Putative peptidoglycan binding domain JM955_RS26340 PF03572 Peptidase family S41 JM955_RS26345 PF02687 FtsX-like permease family JM955_RS26345 PF18075 FtsX extracellular domain JM955_RS26350 PF00005 ABC transporter JM955_RS26355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JM955_RS26365 PF07517 SecA DEAD-like domain JM955_RS26365 PF02810 SEC-C motif JM955_RS26365 PF07516 SecA Wing and Scaffold domain JM955_RS26365 PF00271 Helicase conserved C-terminal domain JM955_RS26365 PF01043 SecA preprotein cross-linking domain JM955_RS26375 PF00005 ABC transporter JM955_RS26405 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JM955_RS26405 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JM955_RS26410 PF00313 'Cold-shock' DNA-binding domain JM955_RS26420 PF04851 Type III restriction enzyme, res subunit JM955_RS26420 PF00271 Helicase conserved C-terminal domain JM955_RS26425 PF01476 LysM domain JM955_RS26425 PF00877 NlpC/P60 family JM955_RS26430 PF01638 HxlR-like helix-turn-helix JM955_RS26435 PF02645 Uncharacterised protein, DegV family COG1307 JM955_RS26440 PF09186 Domain of unknown function (DUF1949) JM955_RS26440 PF01205 Uncharacterized protein family UPF0029 JM955_RS26445 PF03816 Cell envelope-related transcriptional attenuator domain JM955_RS26450 PF02350 UDP-N-acetylglucosamine 2-epimerase JM955_RS26455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JM955_RS26455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JM955_RS26455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JM955_RS26460 PF00953 Glycosyl transferase family 4 JM955_RS26465 PF01522 Polysaccharide deacetylase JM955_RS26470 PF00874 PRD domain JM955_RS26470 PF00158 Sigma-54 interaction domain JM955_RS26470 PF03610 PTS system fructose IIA component JM955_RS26480 PF02417 Chromate transporter JM955_RS26485 PF04794 YdjC-like protein JM955_RS26490 PF11975 Family 4 glycosyl hydrolase C-terminal domain JM955_RS26490 PF02056 Family 4 glycosyl hydrolase JM955_RS26495 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JM955_RS26500 PF02378 Phosphotransferase system, EIIC JM955_RS26505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JM955_RS26515 PF02675 S-adenosylmethionine decarboxylase JM955_RS26520 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JM955_RS26525 PF02378 Phosphotransferase system, EIIC JM955_RS26530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JM955_RS26535 PF00375 Sodium:dicarboxylate symporter family JM955_RS26555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS26555 PF03466 LysR substrate binding domain JM955_RS26570 PF01654 Cytochrome bd terminal oxidase subunit I JM955_RS26575 PF02322 Cytochrome bd terminal oxidase subunit II JM955_RS26580 PF02040 Arsenical pump membrane protein JM955_RS26585 PF01964 Radical SAM ThiC family JM955_RS26585 PF13667 ThiC-associated domain JM955_RS26590 PF02652 L-lactate permease JM955_RS26600 PF09988 Uncharacterized metal-binding protein (DUF2227) JM955_RS26610 PF00884 Sulfatase JM955_RS26615 PF01063 Amino-transferase class IV JM955_RS26620 PF00877 NlpC/P60 family JM955_RS26620 PF01476 LysM domain JM955_RS26625 PF01773 Na+ dependent nucleoside transporter N-terminus JM955_RS26625 PF07662 Na+ dependent nucleoside transporter C-terminus JM955_RS26640 PF02028 BCCT, betaine/carnitine/choline family transporter JM955_RS26645 PF06725 3D domain JM955_RS26645 PF01476 LysM domain JM955_RS26670 PF04434 SWIM zinc finger JM955_RS26675 PF00176 SNF2 family N-terminal domain JM955_RS26675 PF12419 SNF2 Helicase protein JM955_RS26675 PF00271 Helicase conserved C-terminal domain JM955_RS26705 PF04542 Sigma-70 region 2 JM955_RS26705 PF04545 Sigma-70, region 4 JM955_RS26715 PF12704 MacB-like periplasmic core domain JM955_RS26715 PF02687 FtsX-like permease family JM955_RS26720 PF00005 ABC transporter JM955_RS26730 PF07690 Major Facilitator Superfamily JM955_RS26745 PF00989 PAS fold JM955_RS26745 PF16736 Single Cache-like JM955_RS26745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS26745 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS26750 PF00486 Transcriptional regulatory protein, C terminal JM955_RS26750 PF00072 Response regulator receiver domain JM955_RS26755 PF16363 GDP-mannose 4,6 dehydratase JM955_RS26760 PF16363 GDP-mannose 4,6 dehydratase JM955_RS26770 PF03816 Cell envelope-related transcriptional attenuator domain JM955_RS26775 PF01370 NAD dependent epimerase/dehydratase family JM955_RS26780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JM955_RS26780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JM955_RS26780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JM955_RS26795 PF00534 Glycosyl transferases group 1 JM955_RS26795 PF13439 Glycosyltransferase Family 4 JM955_RS26800 PF00535 Glycosyl transferase family 2 JM955_RS26805 PF00534 Glycosyl transferases group 1 JM955_RS26805 PF13439 Glycosyltransferase Family 4 JM955_RS26810 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS26815 PF07478 D-ala D-ala ligase C-terminus JM955_RS26820 PF02397 Bacterial sugar transferase JM955_RS26825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JM955_RS26830 PF02719 Polysaccharide biosynthesis protein JM955_RS26835 PF00483 Nucleotidyl transferase JM955_RS26845 PF13614 AAA domain JM955_RS26850 PF02706 Chain length determinant protein JM955_RS26850 PF13807 G-rich domain on putative tyrosine kinase JM955_RS26855 PF13614 AAA domain JM955_RS26860 PF07977 FabA-like domain JM955_RS26870 PF12116 Stage III sporulation protein D JM955_RS26880 PF01551 Peptidase family M23 JM955_RS26890 PF00005 ABC transporter JM955_RS26895 PF04397 LytTr DNA-binding domain JM955_RS26895 PF00072 Response regulator receiver domain JM955_RS26900 PF08486 Stage II sporulation protein JM955_RS26905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JM955_RS26915 PF06612 Protein of unknown function (DUF1146) JM955_RS26920 PF00361 Proton-conducting membrane transporter JM955_RS26925 PF00361 Proton-conducting membrane transporter JM955_RS26930 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus JM955_RS26930 PF00361 Proton-conducting membrane transporter JM955_RS26930 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JM955_RS26935 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JM955_RS26940 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JM955_RS26950 PF00146 NADH dehydrogenase JM955_RS26955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JM955_RS26960 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JM955_RS26965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JM955_RS26970 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JM955_RS26975 PF00563 EAL domain JM955_RS26975 PF03707 Bacterial signalling protein N terminal repeat JM955_RS26975 PF00990 Diguanylate cyclase, GGDEF domain JM955_RS26990 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JM955_RS26990 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JM955_RS26995 PF02874 ATP synthase alpha/beta family, beta-barrel domain JM955_RS26995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JM955_RS27000 PF00231 ATP synthase JM955_RS27005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JM955_RS27005 PF02874 ATP synthase alpha/beta family, beta-barrel domain JM955_RS27005 PF00306 ATP synthase alpha/beta chain, C terminal domain JM955_RS27010 PF00213 ATP synthase delta (OSCP) subunit JM955_RS27015 PF00430 ATP synthase B/B' CF(0) JM955_RS27020 PF00137 ATP synthase subunit C JM955_RS27025 PF00119 ATP synthase A chain JM955_RS27030 PF03899 ATP synthase I chain JM955_RS27050 PF00464 Serine hydroxymethyltransferase JM955_RS27055 PF04260 Protein of unknown function (DUF436) JM955_RS27060 PF02502 Ribose/Galactose Isomerase JM955_RS27065 PF01451 Low molecular weight phosphotyrosine protein phosphatase JM955_RS27070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JM955_RS27075 PF07681 DoxX JM955_RS27080 PF01613 Flavin reductase like domain JM955_RS27090 PF02659 Putative manganese efflux pump JM955_RS27095 PF01300 Telomere recombination JM955_RS27095 PF03481 Putative GTP-binding controlling metal-binding JM955_RS27105 PF09551 Stage II sporulation protein R (spore_II_R) JM955_RS27110 PF17827 PrmC N-terminal domain JM955_RS27110 PF13847 Methyltransferase domain JM955_RS27115 PF03462 PCRF domain JM955_RS27115 PF00472 RF-1 domain JM955_RS27120 PF00265 Thymidine kinase JM955_RS27125 PF01197 Ribosomal protein L31 JM955_RS27130 PF07497 Rho termination factor, RNA-binding domain JM955_RS27130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JM955_RS27130 PF07498 Rho termination factor, N-terminal domain JM955_RS27135 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JM955_RS27140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JM955_RS27145 PF01116 Fructose-bisphosphate aldolase class-II JM955_RS27150 PF00072 Response regulator receiver domain JM955_RS27155 PF10740 Domain of unknown function (DUF2529) JM955_RS27160 PF06418 CTP synthase N-terminus JM955_RS27160 PF00117 Glutamine amidotransferase class-I JM955_RS27165 PF05066 HB1, ASXL, restriction endonuclease HTH domain JM955_RS27175 PF02770 Acyl-CoA dehydrogenase, middle domain JM955_RS27175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM955_RS27175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM955_RS27180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM955_RS27180 PF02770 Acyl-CoA dehydrogenase, middle domain JM955_RS27180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM955_RS27185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JM955_RS27185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JM955_RS27190 PF00108 Thiolase, N-terminal domain JM955_RS27190 PF02803 Thiolase, C-terminal domain JM955_RS27195 PF02754 Cysteine-rich domain JM955_RS27195 PF13183 4Fe-4S dicluster domain JM955_RS27200 PF13091 PLD-like domain JM955_RS27205 PF03851 UV-endonuclease UvdE JM955_RS27210 PF00563 EAL domain JM955_RS27210 PF00990 Diguanylate cyclase, GGDEF domain JM955_RS27210 PF03707 Bacterial signalling protein N terminal repeat JM955_RS27225 PF03413 Peptidase propeptide and YPEB domain JM955_RS27225 PF02868 Thermolysin metallopeptidase, alpha-helical domain JM955_RS27225 PF07504 Fungalysin/Thermolysin Propeptide Motif JM955_RS27225 PF01447 Thermolysin metallopeptidase, catalytic domain JM955_RS27230 PF00072 Response regulator receiver domain JM955_RS27230 PF00196 Bacterial regulatory proteins, luxR family JM955_RS27235 PF07730 Histidine kinase JM955_RS27235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS27245 PF00005 ABC transporter JM955_RS27250 PF00557 Metallopeptidase family M24 JM955_RS27260 PF02225 PA domain JM955_RS27260 PF04389 Peptidase family M28 JM955_RS27280 PF08281 Sigma-70, region 4 JM955_RS27280 PF04542 Sigma-70 region 2 JM955_RS27285 PF00750 tRNA synthetases class I (R) JM955_RS27285 PF03485 Arginyl tRNA synthetase N terminal domain JM955_RS27285 PF05746 DALR anticodon binding domain JM955_RS27290 PF09148 Domain of unknown function (DUF1934) JM955_RS27295 PF02016 LD-carboxypeptidase N-terminal domain JM955_RS27295 PF17676 LD-carboxypeptidase C-terminal domain JM955_RS27310 PF00491 Arginase family JM955_RS27315 PF17284 Spermidine synthase tetramerisation domain JM955_RS27320 PF07690 Major Facilitator Superfamily JM955_RS27325 PF13411 MerR HTH family regulatory protein JM955_RS27330 PF03009 Glycerophosphoryl diester phosphodiesterase family JM955_RS27335 PF00905 Penicillin binding protein transpeptidase domain JM955_RS27335 PF00912 Transglycosylase JM955_RS27340 PF08741 YwhD family JM955_RS27345 PF02163 Peptidase family M50 JM955_RS27350 PF01361 Tautomerase enzyme JM955_RS27355 PF01966 HD domain JM955_RS27360 PF01497 Periplasmic binding protein JM955_RS27365 PF00005 ABC transporter JM955_RS27370 PF01032 FecCD transport family JM955_RS27375 PF01032 FecCD transport family JM955_RS27380 PF07293 Protein of unknown function (DUF1450) JM955_RS27390 PF03099 Biotin/lipoate A/B protein ligase family JM955_RS27395 PF01515 Phosphate acetyl/butaryl transferase JM955_RS27400 PF06778 Chlorite dismutase JM955_RS27405 PF07943 Penicillin-binding protein 5, C-terminal domain JM955_RS27405 PF00768 D-alanyl-D-alanine carboxypeptidase JM955_RS27410 PF07486 Cell Wall Hydrolase JM955_RS27415 PF09671 Spore coat protein (Spore_GerQ) JM955_RS27420 PF04241 Protein of unknown function (DUF423) JM955_RS27430 PF02254 TrkA-N domain JM955_RS27430 PF07885 Ion channel JM955_RS27435 PF00860 Permease family JM955_RS27445 PF12823 Domain of unknown function (DUF3817) JM955_RS27450 PF03167 Uracil DNA glycosylase superfamily JM955_RS27455 PF12679 ABC-2 family transporter protein JM955_RS27460 PF00005 ABC transporter JM955_RS27465 PF13472 GDSL-like Lipase/Acylhydrolase family JM955_RS27470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JM955_RS27470 PF00356 Bacterial regulatory proteins, lacI family JM955_RS27480 PF03447 Homoserine dehydrogenase, NAD binding domain JM955_RS27480 PF00742 Homoserine dehydrogenase JM955_RS27480 PF01842 ACT domain JM955_RS27485 PF04204 Homoserine O-succinyltransferase JM955_RS27490 PF01053 Cys/Met metabolism PLP-dependent enzyme JM955_RS27500 PF13419 Haloacid dehalogenase-like hydrolase JM955_RS27505 PF00027 Cyclic nucleotide-binding domain JM955_RS27510 PF02525 Flavodoxin-like fold JM955_RS27515 PF00072 Response regulator receiver domain JM955_RS27515 PF00196 Bacterial regulatory proteins, luxR family JM955_RS27520 PF13185 GAF domain JM955_RS27520 PF07730 Histidine kinase JM955_RS27525 PF08543 Phosphomethylpyrimidine kinase JM955_RS27530 PF07694 5TMR of 5TMR-LYT JM955_RS27530 PF00990 Diguanylate cyclase, GGDEF domain JM955_RS27535 PF04328 Selenoprotein, putative JM955_RS27540 PF13722 5TM C-terminal transporter carbon starvation CstA JM955_RS27540 PF02554 Carbon starvation protein CstA JM955_RS27545 PF00072 Response regulator receiver domain JM955_RS27545 PF04397 LytTr DNA-binding domain JM955_RS27550 PF07690 Major Facilitator Superfamily JM955_RS27555 PF03808 Glycosyl transferase WecB/TagA/CpsF family JM955_RS27560 PF00534 Glycosyl transferases group 1 JM955_RS27560 PF13439 Glycosyltransferase Family 4 JM955_RS27570 PF03458 UPF0126 domain JM955_RS27575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS27585 PF03061 Thioesterase superfamily JM955_RS27590 PF00535 Glycosyl transferase family 2 JM955_RS27600 PF00535 Glycosyl transferase family 2 JM955_RS27610 PF09586 Bacterial membrane protein YfhO JM955_RS27615 PF00535 Glycosyl transferase family 2 JM955_RS27625 PF08361 MAATS-type transcriptional repressor, C-terminal region JM955_RS27625 PF00440 Bacterial regulatory proteins, tetR family JM955_RS27630 PF12848 ABC transporter JM955_RS27630 PF00005 ABC transporter JM955_RS27635 PF00440 Bacterial regulatory proteins, tetR family JM955_RS27640 PF00873 AcrB/AcrD/AcrF family JM955_RS27645 PF01641 SelR domain JM955_RS27645 PF01625 Peptide methionine sulfoxide reductase JM955_RS27650 PF01594 AI-2E family transporter JM955_RS27655 PF04172 LrgB-like family JM955_RS27660 PF03788 LrgA family JM955_RS27665 PF04397 LytTr DNA-binding domain JM955_RS27665 PF00072 Response regulator receiver domain JM955_RS27670 PF07694 5TMR of 5TMR-LYT JM955_RS27670 PF06580 Histidine kinase JM955_RS27670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS27670 PF13492 GAF domain JM955_RS27675 PF07690 Major Facilitator Superfamily JM955_RS27680 PF02028 BCCT, betaine/carnitine/choline family transporter JM955_RS27685 PF02898 Nitric oxide synthase, oxygenase domain JM955_RS27690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JM955_RS27690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JM955_RS27700 PF02293 AmiS/UreI family transporter JM955_RS27705 PF16363 GDP-mannose 4,6 dehydratase JM955_RS27710 PF03006 Haemolysin-III related JM955_RS27720 PF00271 Helicase conserved C-terminal domain JM955_RS27720 PF00270 DEAD/DEAH box helicase JM955_RS27720 PF03880 DbpA RNA binding domain JM955_RS27725 PF00478 IMP dehydrogenase / GMP reductase domain JM955_RS27730 PF01432 Peptidase family M3 JM955_RS27730 PF08439 Oligopeptidase F JM955_RS27740 PF13188 PAS domain JM955_RS27740 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS27740 PF00989 PAS fold JM955_RS27740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS27740 PF13426 PAS domain JM955_RS27745 PF02590 Predicted SPOUT methyltransferase JM955_RS27755 PF13180 PDZ domain JM955_RS27760 PF00753 Metallo-beta-lactamase superfamily JM955_RS27765 PF09648 YycH protein JM955_RS27775 PF00512 His Kinase A (phospho-acceptor) domain JM955_RS27775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS27775 PF13426 PAS domain JM955_RS27775 PF00672 HAMP domain JM955_RS27780 PF00072 Response regulator receiver domain JM955_RS27780 PF00486 Transcriptional regulatory protein, C terminal JM955_RS27805 PF00709 Adenylosuccinate synthetase JM955_RS27810 PF03796 DnaB-like helicase C terminal domain JM955_RS27810 PF00772 DnaB-like helicase N terminal domain JM955_RS27815 PF01281 Ribosomal protein L9, N-terminal domain JM955_RS27815 PF03948 Ribosomal protein L9, C-terminal domain JM955_RS27820 PF01368 DHH family JM955_RS27820 PF02272 DHHA1 domain JM955_RS27825 PF09991 Predicted membrane protein (DUF2232) JM955_RS27830 PF01084 Ribosomal protein S18 JM955_RS27835 PF00436 Single-strand binding protein family JM955_RS27840 PF01250 Ribosomal protein S6 JM955_RS27845 PF06071 Protein of unknown function (DUF933) JM955_RS27845 PF01926 50S ribosome-binding GTPase JM955_RS27850 PF06107 Bacterial protein of unknown function (DUF951) JM955_RS27855 PF00924 Mechanosensitive ion channel JM955_RS27860 PF06866 Protein of unknown function (DUF1256) JM955_RS27865 PF17762 HTH domain found in ParB protein JM955_RS27865 PF02195 ParB-like nuclease domain JM955_RS27870 PF13614 AAA domain JM955_RS27875 PF02195 ParB-like nuclease domain JM955_RS27875 PF17762 HTH domain found in ParB protein JM955_RS27880 PF02527 rRNA small subunit methyltransferase G JM955_RS27885 PF13932 GidA associated domain JM955_RS27885 PF01134 Glucose inhibited division protein A JM955_RS27890 PF10396 GTP-binding protein TrmE N-terminus JM955_RS27890 PF01926 50S ribosome-binding GTPase JM955_RS27890 PF12631 MnmE helical domain JM955_RS27895 PF14804 Jag N-terminus JM955_RS27895 PF01424 R3H domain JM955_RS27900 PF02096 60Kd inner membrane protein JM955_RS27905 PF00825 Ribonuclease P JM955_RS27910 PF00468 Ribosomal protein L34 JM955_RS27940 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) JM955_RS28010 PF04235 Protein of unknown function (DUF418) JM955_RS28020 PF00388 Phosphatidylinositol-specific phospholipase C, X domain JM955_RS28055 PF03992 Antibiotic biosynthesis monooxygenase JM955_RS28060 PF03466 LysR substrate binding domain JM955_RS28060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM955_RS28065 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 JM955_RS28065 PF03944 delta endotoxin JM955_RS28065 PF00555 delta endotoxin JM955_RS28065 PF03945 delta endotoxin, N-terminal domain JM955_RS28075 PF05857 TraX protein JM955_RS28080 PF02687 FtsX-like permease family JM955_RS28085 PF00005 ABC transporter JM955_RS28090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM955_RS28095 PF00072 Response regulator receiver domain JM955_RS28095 PF00486 Transcriptional regulatory protein, C terminal JM955_RS28125 PF00817 impB/mucB/samB family JM955_RS28125 PF11799 impB/mucB/samB family C-terminal domain JM955_RS28125 PF11798 IMS family HHH motif JM955_RS28150 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JM955_RS28155 PF00144 Beta-lactamase JM955_RS28200 PF00216 Bacterial DNA-binding protein JM955_RS28205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JM955_RS28205 PF18277 AbrB C-terminal domain JM955_RS28230 PF07282 Putative transposase DNA-binding domain JM955_RS28230 PF01385 Probable transposase JM955_RS28230 PF12323 Helix-turn-helix domain JM955_RS28235 PF00892 EamA-like transporter family JM955_RS28240 PF07729 FCD domain JM955_RS28240 PF00392 Bacterial regulatory proteins, gntR family JM955_RS28245 PF00892 EamA-like transporter family JM955_RS28255 PF07690 Major Facilitator Superfamily JM955_RS28260 PF01804 Penicillin amidase JM955_RS28265 PF00501 AMP-binding enzyme JM955_RS28265 PF13193 AMP-binding enzyme C-terminal domain JM955_RS28265 PF00668 Condensation domain JM955_RS28265 PF00550 Phosphopantetheine attachment site JM955_RS28265 PF00668 Condensation domain JM955_RS28265 PF13193 AMP-binding enzyme C-terminal domain JM955_RS28265 PF00550 Phosphopantetheine attachment site JM955_RS28265 PF00501 AMP-binding enzyme JM955_RS28270 PF00501 AMP-binding enzyme JM955_RS28270 PF00668 Condensation domain JM955_RS28270 PF00550 Phosphopantetheine attachment site JM955_RS28270 PF13193 AMP-binding enzyme C-terminal domain JM955_RS28275 PF00501 AMP-binding enzyme JM955_RS28275 PF00668 Condensation domain JM955_RS28275 PF00550 Phosphopantetheine attachment site JM955_RS28275 PF13193 AMP-binding enzyme C-terminal domain JM955_RS28280 PF00975 Thioesterase domain JM955_RS28295 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS28300 PF02423 Ornithine cyclodeaminase/mu-crystallin family JM955_RS28315 PF00216 Bacterial DNA-binding protein JM955_RS28320 PF18277 AbrB C-terminal domain JM955_RS28320 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JM955_RS28325 PF01636 Phosphotransferase enzyme family JM955_RS28330 PF13439 Glycosyltransferase Family 4 JM955_RS28330 PF00534 Glycosyl transferases group 1 JM955_RS28350 PF00534 Glycosyl transferases group 1 JM955_RS28350 PF13439 Glycosyltransferase Family 4 JM955_RS28355 PF01370 NAD dependent epimerase/dehydratase family JM955_RS28360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JM955_RS28360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JM955_RS28360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JM955_RS28365 PF00483 Nucleotidyl transferase JM955_RS28375 PF00854 POT family JM955_RS28385 PF00392 Bacterial regulatory proteins, gntR family JM955_RS28385 PF00155 Aminotransferase class I and II JM955_RS28390 PF00892 EamA-like transporter family JM955_RS28410 PF01734 Patatin-like phospholipase JM955_RS28410 PF00027 Cyclic nucleotide-binding domain JM955_RS28420 PF11954 Domain of unknown function (DUF3471) JM955_RS28420 PF00144 Beta-lactamase JM955_RS28475 PF04740 LXG domain of WXG superfamily JM955_RS28475 PF14436 Bacterial EndoU nuclease JM955_RS28530 PF10042 Uncharacterized conserved protein (DUF2278) JM955_RS28535 PF01483 Proprotein convertase P-domain JM955_RS28535 PF00082 Subtilase family JM955_RS28545 PF00082 Subtilase family JM955_RS28575 PF08450 SMP-30/Gluconolactonase/LRE-like region JM955_RS28580 PF00264 Common central domain of tyrosinase JM955_RS28585 PF16859 Tetracyclin repressor-like, C-terminal domain JM955_RS28585 PF00440 Bacterial regulatory proteins, tetR family JM955_RS28590 PF07690 Major Facilitator Superfamily JM955_RS28600 PF03315 Serine dehydratase beta chain JM955_RS28600 PF01842 ACT domain JM955_RS28605 PF03313 Serine dehydratase alpha chain JM955_RS28620 PF01022 Bacterial regulatory protein, arsR family JM955_RS28625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS28625 PF00672 HAMP domain JM955_RS28625 PF02743 Cache domain JM955_RS28640 PF00797 N-acetyltransferase JM955_RS28645 PF00440 Bacterial regulatory proteins, tetR family JM955_RS28650 PF01752 Collagenase JM955_RS28650 PF08453 Peptidase family M9 N-terminal JM955_RS28650 PF18496 Collagenase G catalytic helper subdomain JM955_RS28655 PF00583 Acetyltransferase (GNAT) family JM955_RS28665 PF01494 FAD binding domain JM955_RS28670 PF00144 Beta-lactamase JM955_RS28670 PF11954 Domain of unknown function (DUF3471) JM955_RS28675 PF01098 Cell cycle protein JM955_RS28680 PF01769 Divalent cation transporter JM955_RS28680 PF00571 CBS domain JM955_RS28680 PF03448 MgtE intracellular N domain JM955_RS28745 PF13495 Phage integrase, N-terminal SAM-like domain JM955_RS28745 PF00589 Phage integrase family JM955_RS28755 PF00082 Subtilase family JM955_RS28770 PF00413 Matrixin JM955_RS28795 PF03944 delta endotoxin JM955_RS28795 PF03945 delta endotoxin, N-terminal domain JM955_RS28795 PF00555 delta endotoxin JM955_RS28810 PF07681 DoxX JM955_RS28815 PF00501 AMP-binding enzyme JM955_RS28815 PF13193 AMP-binding enzyme C-terminal domain JM955_RS28835 PF01833 IPT/TIG domain JM955_RS28835 PF00686 Starch binding domain JM955_RS28835 PF00128 Alpha amylase, catalytic domain JM955_RS28840 PF07690 Major Facilitator Superfamily JM955_RS28870 PF12996 DUF based on E. rectale Gene description (DUF3880) JM955_RS28880 PF01385 Probable transposase JM955_RS28880 PF12323 Helix-turn-helix domain JM955_RS28880 PF07282 Putative transposase DNA-binding domain JM955_RS28885 PF03102 NeuB family JM955_RS28885 PF08666 SAF domain JM955_RS28900 PF02348 Cytidylyltransferase JM955_RS28905 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JM955_RS28910 PF16363 GDP-mannose 4,6 dehydratase JM955_RS28915 PF02719 Polysaccharide biosynthesis protein JM955_RS28920 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JM955_RS28925 PF00535 Glycosyl transferase family 2 JM955_RS28930 PF00535 Glycosyl transferase family 2 JM955_RS28940 PF18801 response regulator aspartate phosphatase H, N terminal JM955_RS28965 PF01385 Probable transposase JM955_RS28965 PF07282 Putative transposase DNA-binding domain JM955_RS28965 PF12323 Helix-turn-helix domain JM955_RS28970 PF00293 NUDIX domain JM955_RS28975 PF01022 Bacterial regulatory protein, arsR family JM955_RS28980 PF00589 Phage integrase family JM955_RS28980 PF13495 Phage integrase, N-terminal SAM-like domain JM955_RS29020 PF18801 response regulator aspartate phosphatase H, N terminal JM955_RS29030 PF17209 Hfq protein JM955_RS29035 PF05163 DinB family JM955_RS29040 PF01022 Bacterial regulatory protein, arsR family JM955_RS29045 PF02600 Disulfide bond formation protein DsbB JM955_RS29060 PF00565 Staphylococcal nuclease homologue JM955_RS29065 PF13342 C-terminal repeat of topoisomerase JM955_RS29065 PF01751 Toprim domain JM955_RS29065 PF01131 DNA topoisomerase JM955_RS29085 PF08378 Nuclease-related domain JM955_RS29125 PF16485 Protealysin propeptide JM955_RS29125 PF02868 Thermolysin metallopeptidase, alpha-helical domain JM955_RS29125 PF01447 Thermolysin metallopeptidase, catalytic domain JM955_RS29185 PF02195 ParB-like nuclease domain JM955_RS29190 PF02423 Ornithine cyclodeaminase/mu-crystallin family JM955_RS29195 PF00291 Pyridoxal-phosphate dependent enzyme JM955_RS29200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JM955_RS29200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JM955_RS29205 PF07690 Major Facilitator Superfamily JM955_RS29210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JM955_RS29210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JM955_RS29215 PF05116 Sucrose-6F-phosphate phosphohydrolase JM955_RS29220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JM955_RS29225 PF00356 Bacterial regulatory proteins, lacI family JM955_RS29230 PF01648 4'-phosphopantetheinyl transferase superfamily JM955_RS29235 PF00668 Condensation domain JM955_RS29235 PF00501 AMP-binding enzyme JM955_RS29235 PF13193 AMP-binding enzyme C-terminal domain JM955_RS29235 PF00975 Thioesterase domain JM955_RS29235 PF00550 Phosphopantetheine attachment site JM955_RS29245 PF00501 AMP-binding enzyme JM955_RS29245 PF00550 Phosphopantetheine attachment site JM955_RS29245 PF00668 Condensation domain JM955_RS29245 PF13193 AMP-binding enzyme C-terminal domain JM955_RS29255 PF00005 ABC transporter JM955_RS29255 PF00664 ABC transporter transmembrane region JM955_RS29260 PF00296 Luciferase-like monooxygenase JM955_RS29265 PF14765 Polyketide synthase dehydratase JM955_RS29265 PF00550 Phosphopantetheine attachment site JM955_RS29265 PF00668 Condensation domain JM955_RS29265 PF08659 KR domain JM955_RS29265 PF02801 Beta-ketoacyl synthase, C-terminal domain JM955_RS29265 PF00109 Beta-ketoacyl synthase, N-terminal domain JM955_RS29265 PF13193 AMP-binding enzyme C-terminal domain JM955_RS29265 PF16197 Ketoacyl-synthetase C-terminal extension JM955_RS29265 PF00501 AMP-binding enzyme JM955_RS29270 PF00501 AMP-binding enzyme JM955_RS29270 PF13193 AMP-binding enzyme C-terminal domain JM955_RS29270 PF00668 Condensation domain JM955_RS29270 PF00550 Phosphopantetheine attachment site JM955_RS29270 PF00975 Thioesterase domain JM955_RS29275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM955_RS29275 PF02770 Acyl-CoA dehydrogenase, middle domain JM955_RS29275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM955_RS29280 PF00550 Phosphopantetheine attachment site JM955_RS29285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JM955_RS29285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JM955_RS29290 PF00698 Acyl transferase domain JM955_RS29300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM955_RS29300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM955_RS29300 PF02770 Acyl-CoA dehydrogenase, middle domain JM955_RS29310 PF00501 AMP-binding enzyme JM955_RS29310 PF13193 AMP-binding enzyme C-terminal domain JM955_RS29310 PF00668 Condensation domain JM955_RS29310 PF00550 Phosphopantetheine attachment site JM955_RS29315 PF00501 AMP-binding enzyme JM955_RS29315 PF13193 AMP-binding enzyme C-terminal domain JM955_RS29315 PF00668 Condensation domain JM955_RS29315 PF00975 Thioesterase domain JM955_RS29315 PF00550 Phosphopantetheine attachment site JM955_RS29320 PF00550 Phosphopantetheine attachment site JM955_RS29320 PF00668 Condensation domain JM955_RS29320 PF16197 Ketoacyl-synthetase C-terminal extension JM955_RS29320 PF14765 Polyketide synthase dehydratase JM955_RS29320 PF00550 Phosphopantetheine attachment site JM955_RS29320 PF08659 KR domain JM955_RS29320 PF02801 Beta-ketoacyl synthase, C-terminal domain JM955_RS29320 PF00109 Beta-ketoacyl synthase, N-terminal domain JM955_RS29320 PF13193 AMP-binding enzyme C-terminal domain JM955_RS29320 PF02801 Beta-ketoacyl synthase, C-terminal domain JM955_RS29320 PF00501 AMP-binding enzyme JM955_RS29320 PF13193 AMP-binding enzyme C-terminal domain JM955_RS29320 PF00668 Condensation domain JM955_RS29320 PF16197 Ketoacyl-synthetase C-terminal extension JM955_RS29320 PF00501 AMP-binding enzyme JM955_RS29320 PF08659 KR domain JM955_RS29320 PF00109 Beta-ketoacyl synthase, N-terminal domain JM955_RS29320 PF14765 Polyketide synthase dehydratase JM955_RS29335 PF00975 Thioesterase domain JM955_RS29335 PF00668 Condensation domain JM955_RS29335 PF13193 AMP-binding enzyme C-terminal domain JM955_RS29335 PF00550 Phosphopantetheine attachment site JM955_RS29335 PF00501 AMP-binding enzyme JM955_RS29340 PF00248 Aldo/keto reductase family JM955_RS29370 PF01381 Helix-turn-helix JM955_RS29395 PF00580 UvrD/REP helicase N-terminal domain JM955_RS29395 PF13361 UvrD-like helicase C-terminal domain JM955_RS29400 PF02463 RecF/RecN/SMC N terminal domain JM955_RS29415 PF00271 Helicase conserved C-terminal domain JM955_RS29480 PF00580 UvrD/REP helicase N-terminal domain JM955_RS29480 PF13361 UvrD-like helicase C-terminal domain JM955_RS29525 PF18801 response regulator aspartate phosphatase H, N terminal JM955_RS29525 PF13176 Tetratricopeptide repeat JM955_RS29535 PF00583 Acetyltransferase (GNAT) family JM955_RS29535 PF01047 MarR family JM955_RS29540 PF04607 Region found in RelA / SpoT proteins JM955_RS29540 PF13291 ACT domain JM955_RS29540 PF02824 TGS domain JM955_RS29550 PF00216 Bacterial DNA-binding protein JM955_RS29580 PF01510 N-acetylmuramoyl-L-alanine amidase JM955_RS29580 PF01471 Putative peptidoglycan binding domain JM955_RS29580 PF01476 LysM domain JM955_RS29625 PF13537 Glutamine amidotransferase domain JM955_RS29625 PF00733 Asparagine synthase JM955_RS29630 PF00440 Bacterial regulatory proteins, tetR family JM955_RS29630 PF17932 Tetracyclin repressor-like, C-terminal domain JM955_RS29635 PF12323 Helix-turn-helix domain JM955_RS29635 PF01385 Probable transposase JM955_RS29635 PF07282 Putative transposase DNA-binding domain JM955_RS29650 PF01522 Polysaccharide deacetylase JM955_RS29660 PF01381 Helix-turn-helix JM955_RS29665 PF01520 N-acetylmuramoyl-L-alanine amidase JM955_RS29665 PF00395 S-layer homology domain JM955_RS29685 PF00005 ABC transporter JM955_RS29685 PF03412 Peptidase C39 family JM955_RS29685 PF00664 ABC transporter transmembrane region JM955_RS29690 PF05147 Lanthionine synthetase C-like protein JM955_RS29690 PF13575 Domain of unknown function (DUF4135) JM955_RS29730 PF00082 Subtilase family JM955_RS29765 PF01510 N-acetylmuramoyl-L-alanine amidase JM955_RS29780 PF01510 N-acetylmuramoyl-L-alanine amidase JM955_RS29780 PF01476 LysM domain JM955_RS29780 PF01471 Putative peptidoglycan binding domain JM955_RS29785 PF04225 Opacity-associated protein A LysM-like domain JM955_RS29785 PF01551 Peptidase family M23 JM955_RS29820 PF10042 Uncharacterized conserved protein (DUF2278) JM955_RS29825 PF04389 Peptidase family M28 JM955_RS29825 PF02225 PA domain JM955_RS29860 PF00664 ABC transporter transmembrane region JM955_RS29860 PF00005 ABC transporter JM955_RS29860 PF03412 Peptidase C39 family JM955_RS29870 PF00535 Glycosyl transferase family 2 JM955_RS29905 PF06414 Zeta toxin JM955_RS29910 PF00293 NUDIX domain JM955_RS29925 PF00453 Ribosomal protein L20 JM955_RS29930 PF07504 Fungalysin/Thermolysin Propeptide Motif JM955_RS29930 PF03413 Peptidase propeptide and YPEB domain JM955_RS29930 PF02868 Thermolysin metallopeptidase, alpha-helical domain JM955_RS29930 PF01447 Thermolysin metallopeptidase, catalytic domain JM955_RS29935 PF18801 response regulator aspartate phosphatase H, N terminal JM955_RS29945 PF00269 Small, acid-soluble spore proteins, alpha/beta type JM955_RS29950 PF00672 HAMP domain JM955_RS29950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM955_RS30040 PF05791 Bacillus haemolytic enterotoxin (HBL) JM955_RS30120 PF01348 Type II intron maturase JM955_RS30120 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JM955_RS30150 PF00091 Tubulin/FtsZ family, GTPase domain JM955_RS30180 PF00963 Cohesin domain JM955_RS30180 PF00395 S-layer homology domain JM955_RS30320 PF07690 Major Facilitator Superfamily JM955_RS30325 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JM955_RS30325 PF13288 DXP reductoisomerase C-terminal domain JM955_RS30325 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JM955_RS30340 PF13302 Acetyltransferase (GNAT) domain