BCE33L_RS00005	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
BCE33L_RS00010	SM00480	DNA polymerase III beta subunit
BCE33L_RS00025	SM00387	Histidine kinase-like ATPases
BCE33L_RS00025	SM00433	TopoisomeraseII
BCE33L_RS00030	SM00434	DNA Topoisomerase IV
BCE33L_RS00065	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCE33L_RS00065	SM01240	BCE33L_RS00065
BCE33L_RS00070	SM00936	Penicillin-binding protein 5, C-terminal domain 
BCE33L_RS00125	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS00135	SM00493	BCE33L_RS00135
BCE33L_RS00220	SM00966	SpoVT / AbrB like domain 
BCE33L_RS00235	SM00493	BCE33L_RS00235
BCE33L_RS00240	SM00650	Ribosomal RNA adenine dimethylases
BCE33L_RS00285	SM01400	BCE33L_RS00285
BCE33L_RS00300	SM00487	DEAD-like helicases superfamily
BCE33L_RS00300	SM00490	helicase superfamily c-terminal domain
BCE33L_RS00300	SM00982	BCE33L_RS00300
BCE33L_RS00300	SM01058	CarD-like/TRCF domain
BCE33L_RS00305	SM00966	SpoVT / AbrB like domain 
BCE33L_RS00320	SM00363	S4 RNA-binding domain
BCE33L_RS00340	SM00316	Ribosomal protein S1-like RNA-binding domain
BCE33L_RS00355	SM00331	Sigma factor PP2C-like phosphatases
BCE33L_RS00355	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BCE33L_RS00360	SM00977	TilS substrate C-terminal domain
BCE33L_RS00370	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS00410	SM00905	Dihydroneopterin aldolase
BCE33L_RS00420	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS00465	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS00465	SM01086	C-terminal, D2-small domain, of ClpB protein
BCE33L_RS00470	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS00480	SM00670	Large family of predicted nucleotide-binding domains
BCE33L_RS00505	SM00840	BCE33L_RS00505
BCE33L_RS00510	SM00535	Ribonuclease III family
BCE33L_RS00515	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BCE33L_RS00525	SM00421	helix_turn_helix, Lux Regulon
BCE33L_RS00540	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BCE33L_RS00545	SM00649	Ribosomal protein L11/L12
BCE33L_RS00575	SM00663	RNA polymerase I subunit A N-terminus
BCE33L_RS00595	SM00838	Elongation factor G C-terminus
BCE33L_RS00595	SM00889	Elongation factor G, domain IV
BCE33L_RS00605	SM01403	BCE33L_RS00605
BCE33L_RS00625	SM01382	BCE33L_RS00625
BCE33L_RS00625	SM01383	BCE33L_RS00625
BCE33L_RS00640	SM00322	K homology RNA-binding domain
BCE33L_RS00660	SM01374	BCE33L_RS00660
BCE33L_RS00665	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BCE33L_RS00725	SM00316	Ribosomal protein S1-like RNA-binding domain
BCE33L_RS00745	SM00662	RNA polymerases D
BCE33L_RS00755	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS00760	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS00790	SM00646	BCE33L_RS00790
BCE33L_RS00805	SM01251	BCE33L_RS00805
BCE33L_RS00920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS00920	SM00895	BCE33L_RS00920
BCE33L_RS00935	SM01350	BCE33L_RS00935
BCE33L_RS00980	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS00980	SM00930	BCE33L_RS00980
BCE33L_RS00990	SM00829	Enoylreductase
BCE33L_RS01040	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS01045	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS01060	SM00342	helix_turn_helix, arabinose operon control protein
BCE33L_RS01160	SM00563	Phosphate acyltransferases
BCE33L_RS01170	SM00354	helix_turn _helix lactose operon repressor
BCE33L_RS01230	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS01260	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS01265	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS01335	SM00487	DEAD-like helicases superfamily
BCE33L_RS01335	SM00490	helicase superfamily c-terminal domain
BCE33L_RS01360	SM01005	Alanine racemase, C-terminal domain
BCE33L_RS01375	SM00316	Ribosomal protein S1-like RNA-binding domain
BCE33L_RS01375	SM00732	Likely ribonuclease with RNase H fold.
BCE33L_RS01385	SM00731	SprT homologues.
BCE33L_RS01490	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS01495	SM00881	CoA binding domain
BCE33L_RS01510	SM00883	Chaperonin 10 Kd subunit
BCE33L_RS01540	SM00448	cheY-homologous receiver domain
BCE33L_RS01540	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS01545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS01545	SM00387	Histidine kinase-like ATPases
BCE33L_RS01545	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS01630	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS01635	SM00387	Histidine kinase-like ATPases
BCE33L_RS01635	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS01640	SM00448	cheY-homologous receiver domain
BCE33L_RS01640	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS01685	SM01001	AIR carboxylase
BCE33L_RS01695	SM00998	Adenylosuccinate lyase C-terminus
BCE33L_RS01710	SM01211	BCE33L_RS01710
BCE33L_RS01735	SM00798	AICARFT/IMPCHase bienzyme
BCE33L_RS01735	SM00851	MGS-like domain
BCE33L_RS01740	SM01209	BCE33L_RS01740
BCE33L_RS01740	SM01210	BCE33L_RS01740
BCE33L_RS01750	SM00244	prohibitin homologues
BCE33L_RS01775	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BCE33L_RS01775	SM00292	breast cancer carboxy-terminal domain
BCE33L_RS01775	SM00532	Ligase N family
BCE33L_RS01805	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS01805	SM00930	BCE33L_RS01805
BCE33L_RS01835	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS01855	SM00845	GatB domain
BCE33L_RS01860	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BCE33L_RS01880	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS01930	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCE33L_RS01930	SM00387	Histidine kinase-like ATPases
BCE33L_RS01930	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS01950	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BCE33L_RS01995	SM01007	Class II Aldolase and Adducin N-terminal domain
BCE33L_RS02105	SM00062	Bacterial periplasmic substrate-binding proteins
BCE33L_RS02105	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BCE33L_RS02110	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS02115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS02115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS02120	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS02120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS02125	SM00642	Alpha-amylase domain
BCE33L_RS02145	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BCE33L_RS02145	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BCE33L_RS02145	SM00493	BCE33L_RS02145
BCE33L_RS02170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS02170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS02190	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS02200	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS02205	SM00060	Fibronectin type 3 domain
BCE33L_RS02205	SM00636	BCE33L_RS02205
BCE33L_RS02205	SM00637	BCE33L_RS02205
BCE33L_RS02235	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS02260	SM00946	Prolyl-tRNA synthetase, C-terminal
BCE33L_RS02305	SM00831	Cation transporter/ATPase, N-terminus
BCE33L_RS02315	SM00226	Low molecular weight phosphatase family
BCE33L_RS02405	SM00478	endonuclease III
BCE33L_RS02425	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS02445	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS02505	SM00984	UDP binding domain
BCE33L_RS02590	SM00478	endonuclease III
BCE33L_RS02590	SM00525	BCE33L_RS02590
BCE33L_RS02615	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS02635	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS02790	SM00567	E-Z type HEAT repeats
BCE33L_RS02805	SM00052	Putative diguanylate phosphodiesterase
BCE33L_RS02805	SM00091	PAS domain
BCE33L_RS02805	SM00267	diguanylate cyclase
BCE33L_RS02815	SM00763	PrkA AAA domain
BCE33L_RS02830	SM00364	Leucine-rich repeats, bacterial type
BCE33L_RS02830	SM00365	Leucine-rich repeat, SDS22-like subfamily
BCE33L_RS02830	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BCE33L_RS02830	SM00725	NEAr Transporter domain
BCE33L_RS02840	SM00062	Bacterial periplasmic substrate-binding proteins
BCE33L_RS02845	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS02865	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BCE33L_RS02875	SM00244	prohibitin homologues
BCE33L_RS02880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS02880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS02885	SM00091	PAS domain
BCE33L_RS02885	SM00387	Histidine kinase-like ATPases
BCE33L_RS02890	SM00448	cheY-homologous receiver domain
BCE33L_RS02915	SM00248	ankyrin repeats
BCE33L_RS02925	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS02950	SM00448	cheY-homologous receiver domain
BCE33L_RS02950	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS02955	SM00387	Histidine kinase-like ATPases
BCE33L_RS02955	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS02970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS02970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS02975	SM00387	Histidine kinase-like ATPases
BCE33L_RS02980	SM00448	cheY-homologous receiver domain
BCE33L_RS02990	SM00919	Malic enzyme, NAD binding domain
BCE33L_RS02990	SM01274	BCE33L_RS02990
BCE33L_RS03005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS03015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS03015	SM00387	Histidine kinase-like ATPases
BCE33L_RS03015	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS03020	SM00448	cheY-homologous receiver domain
BCE33L_RS03020	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS03040	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BCE33L_RS03040	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BCE33L_RS03055	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BCE33L_RS03055	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BCE33L_RS03065	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS03080	SM00028	Tetratricopeptide repeats
BCE33L_RS03080	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS03125	SM01091	Transporter associated domain
BCE33L_RS03140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS03170	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS03200	SM00327	von Willebrand factor (vWF) type A domain
BCE33L_RS03205	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS03210	SM00155	Phospholipase D. Active site motifs.
BCE33L_RS03225	SM00052	Putative diguanylate phosphodiesterase
BCE33L_RS03225	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BCE33L_RS03225	SM00091	PAS domain
BCE33L_RS03225	SM00267	diguanylate cyclase
BCE33L_RS03235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS03235	SM00866	BCE33L_RS03235
BCE33L_RS03245	SM00642	Alpha-amylase domain
BCE33L_RS03280	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS03285	SM00062	Bacterial periplasmic substrate-binding proteins
BCE33L_RS03285	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BCE33L_RS03335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS03335	SM00387	Histidine kinase-like ATPases
BCE33L_RS03335	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS03340	SM00448	cheY-homologous receiver domain
BCE33L_RS03340	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS03380	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS03385	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS03395	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS03405	SM00354	helix_turn _helix lactose operon repressor
BCE33L_RS03420	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS03455	SM00829	Enoylreductase
BCE33L_RS03475	SM00770	Zinc dependent phospholipase C (alpha toxin)
BCE33L_RS03510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS03520	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS03565	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS03665	SM00899	BCE33L_RS03665
BCE33L_RS03810	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCE33L_RS03830	SM00287	Bacterial SH3 domain homologues
BCE33L_RS03840	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS03930	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS04025	SM00450	Rhodanese Homology Domain
BCE33L_RS04035	SM00450	Rhodanese Homology Domain
BCE33L_RS04040	SM00450	Rhodanese Homology Domain
BCE33L_RS04040	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS04050	SM00450	Rhodanese Homology Domain
BCE33L_RS04055	SM00450	Rhodanese Homology Domain
BCE33L_RS04080	SM00829	Enoylreductase
BCE33L_RS04130	SM00287	Bacterial SH3 domain homologues
BCE33L_RS04140	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS04200	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BCE33L_RS04310	SM00344	helix_turn_helix ASNC type
BCE33L_RS04345	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS04380	SM00829	Enoylreductase
BCE33L_RS04420	SM01060	BCE33L_RS04420
BCE33L_RS04445	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS04450	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS04455	SM00062	Bacterial periplasmic substrate-binding proteins
BCE33L_RS04455	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BCE33L_RS04465	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS04505	SM00387	Histidine kinase-like ATPases
BCE33L_RS04510	SM00421	helix_turn_helix, Lux Regulon
BCE33L_RS04510	SM00448	cheY-homologous receiver domain
BCE33L_RS04575	SM00644	BCE33L_RS04575
BCE33L_RS04580	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCE33L_RS04620	SM00957	SecA DEAD-like domain
BCE33L_RS04620	SM00958	SecA preprotein cross-linking domain
BCE33L_RS04635	SM00635	Bacterial Ig-like domain 2
BCE33L_RS04695	SM00646	BCE33L_RS04695
BCE33L_RS04750	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS04755	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS04795	SM00860	SMI1 / KNR4 family
BCE33L_RS04885	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS05000	SM01061	CAT RNA binding domain
BCE33L_RS05015	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS05110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCE33L_RS05130	SM00460	Transglutaminase/protease-like homologues
BCE33L_RS05200	SM00331	Sigma factor PP2C-like phosphatases
BCE33L_RS05200	SM00448	cheY-homologous receiver domain
BCE33L_RS05205	SM00138	Methyltransferase, chemotaxis proteins 
BCE33L_RS05210	SM00387	Histidine kinase-like ATPases
BCE33L_RS05210	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS05210	SM00448	cheY-homologous receiver domain
BCE33L_RS05245	SM00448	cheY-homologous receiver domain
BCE33L_RS05245	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS05250	SM00387	Histidine kinase-like ATPases
BCE33L_RS05250	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS05255	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS05270	SM00829	Enoylreductase
BCE33L_RS05310	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCE33L_RS05430	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS05480	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS05495	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS05615	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS05725	SM00354	helix_turn _helix lactose operon repressor
BCE33L_RS05735	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS05760	SM00725	NEAr Transporter domain
BCE33L_RS05775	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCE33L_RS05790	SM00342	helix_turn_helix, arabinose operon control protein
BCE33L_RS05790	SM00871	Bacterial transcription activator, effector binding domain
BCE33L_RS05805	SM00387	Histidine kinase-like ATPases
BCE33L_RS05805	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS05810	SM00448	cheY-homologous receiver domain
BCE33L_RS05810	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS05840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS05840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS05880	SM00357	Cold shock protein domain
BCE33L_RS05995	SM01060	BCE33L_RS05995
BCE33L_RS06010	SM00642	Alpha-amylase domain
BCE33L_RS06015	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS06025	SM00316	Ribosomal protein S1-like RNA-binding domain
BCE33L_RS06070	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS06070	SM01086	C-terminal, D2-small domain, of ClpB protein
BCE33L_RS06100	SM00825	Beta-ketoacyl synthase
BCE33L_RS06140	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS06145	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS06185	SM00155	Phospholipase D. Active site motifs.
BCE33L_RS06215	SM01118	BCE33L_RS06215
BCE33L_RS06225	SM00954	Region found in RelA / SpoT proteins
BCE33L_RS06380	SM00635	Bacterial Ig-like domain 2
BCE33L_RS06500	SM00861	Transketolase, pyrimidine binding domain
BCE33L_RS06505	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS06630	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS06650	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS06670	SM00014	Acid phosphatase homologues
BCE33L_RS06720	SM00448	cheY-homologous receiver domain
BCE33L_RS06720	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS06725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS06725	SM00387	Histidine kinase-like ATPases
BCE33L_RS06725	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS06730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS06730	SM00895	BCE33L_RS06730
BCE33L_RS06800	SM00822	BCE33L_RS06800
BCE33L_RS06835	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS06860	SM00420	helix_turn_helix, Deoxyribose operon repressor
BCE33L_RS06860	SM01134	BCE33L_RS06860
BCE33L_RS06870	SM00365	Leucine-rich repeat, SDS22-like subfamily
BCE33L_RS06870	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BCE33L_RS06870	SM00725	NEAr Transporter domain
BCE33L_RS06875	SM01007	Class II Aldolase and Adducin N-terminal domain
BCE33L_RS06895	SM00387	Histidine kinase-like ATPases
BCE33L_RS06895	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS06900	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS06920	SM00387	Histidine kinase-like ATPases
BCE33L_RS06920	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS07005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS07010	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS07020	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS07040	SM00344	helix_turn_helix ASNC type
BCE33L_RS07160	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS07235	SM00917	LeuA allosteric (dimerisation) domain
BCE33L_RS07240	SM01329	BCE33L_RS07240
BCE33L_RS07425	SM00387	Histidine kinase-like ATPases
BCE33L_RS07430	SM00421	helix_turn_helix, Lux Regulon
BCE33L_RS07430	SM00448	cheY-homologous receiver domain
BCE33L_RS07525	SM00091	PAS domain
BCE33L_RS07525	SM00387	Histidine kinase-like ATPases
BCE33L_RS07525	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS07545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS07545	SM00387	Histidine kinase-like ATPases
BCE33L_RS07545	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS07600	SM00363	S4 RNA-binding domain
BCE33L_RS07620	SM00448	cheY-homologous receiver domain
BCE33L_RS07620	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS07625	SM00091	PAS domain
BCE33L_RS07625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS07625	SM00387	Histidine kinase-like ATPases
BCE33L_RS07625	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS07635	SM00257	Lysin motif
BCE33L_RS07660	SM00487	DEAD-like helicases superfamily
BCE33L_RS07660	SM00490	helicase superfamily c-terminal domain
BCE33L_RS07670	SM00257	Lysin motif
BCE33L_RS07680	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS07690	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BCE33L_RS07705	SM00644	BCE33L_RS07705
BCE33L_RS07715	SM00870	BCE33L_RS07715
BCE33L_RS07730	SM00316	Ribosomal protein S1-like RNA-binding domain
BCE33L_RS07735	SM01240	BCE33L_RS07735
BCE33L_RS07790	SM00411	bacterial (prokaryotic) histone like domain
BCE33L_RS07815	SM00562	BCE33L_RS07815
BCE33L_RS07835	SM00028	Tetratricopeptide repeats
BCE33L_RS07840	SM00914	BCE33L_RS07840
BCE33L_RS07885	SM00986	Uracil DNA glycosylase superfamily
BCE33L_RS07885	SM00987	UreE urease accessory protein, C-terminal domain 
BCE33L_RS07910	SM00851	MGS-like domain
BCE33L_RS07960	SM00479	BCE33L_RS07960
BCE33L_RS07960	SM00491	BCE33L_RS07960
BCE33L_RS07985	SM00478	endonuclease III
BCE33L_RS07985	SM00525	BCE33L_RS07985
BCE33L_RS07995	SM00060	Fibronectin type 3 domain
BCE33L_RS08045	SM00981	BCE33L_RS08045
BCE33L_RS08055	SM00491	BCE33L_RS08055
BCE33L_RS08115	SM00450	Rhodanese Homology Domain
BCE33L_RS08145	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BCE33L_RS08145	SM00475	5'-3' exonuclease
BCE33L_RS08210	SM00357	Cold shock protein domain
BCE33L_RS08260	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS08265	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS08265	SM00871	Bacterial transcription activator, effector binding domain
BCE33L_RS08320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS08365	SM00448	cheY-homologous receiver domain
BCE33L_RS08370	SM00073	Histidine Phosphotransfer domain
BCE33L_RS08370	SM00260	Two component signalling adaptor domain
BCE33L_RS08370	SM00387	Histidine kinase-like ATPases
BCE33L_RS08370	SM01231	BCE33L_RS08370
BCE33L_RS08390	SM00138	Methyltransferase, chemotaxis proteins 
BCE33L_RS08465	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS08500	SM00260	Two component signalling adaptor domain
BCE33L_RS08500	SM00448	cheY-homologous receiver domain
BCE33L_RS08570	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS08570	SM00962	SRP54-type protein, GTPase domain
BCE33L_RS08580	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BCE33L_RS08635	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS08655	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS08670	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS08670	SM01027	Beta-Casp domain
BCE33L_RS08690	SM00835	Cupin
BCE33L_RS08705	SM00855	Phosphoglycerate mutase family
BCE33L_RS08725	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS08765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS08765	SM00895	BCE33L_RS08765
BCE33L_RS08775	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BCE33L_RS08850	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS08885	SM00421	helix_turn_helix, Lux Regulon
BCE33L_RS08885	SM00448	cheY-homologous receiver domain
BCE33L_RS08895	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS08910	SM00155	Phospholipase D. Active site motifs.
BCE33L_RS08930	SM00919	Malic enzyme, NAD binding domain
BCE33L_RS08930	SM01274	BCE33L_RS08930
BCE33L_RS08935	SM00387	Histidine kinase-like ATPases
BCE33L_RS08940	SM00448	cheY-homologous receiver domain
BCE33L_RS08945	SM00487	DEAD-like helicases superfamily
BCE33L_RS08945	SM00490	helicase superfamily c-terminal domain
BCE33L_RS08970	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS09010	SM00646	BCE33L_RS09010
BCE33L_RS09015	SM00047	Lysozyme subfamily 2
BCE33L_RS09035	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS09065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS09065	SM00866	BCE33L_RS09065
BCE33L_RS09235	SM00854	Bacterial capsule synthesis protein PGA_cap
BCE33L_RS09265	SM00850	LytTr DNA-binding domain
BCE33L_RS09325	SM00448	cheY-homologous receiver domain
BCE33L_RS09325	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS09330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS09330	SM00387	Histidine kinase-like ATPases
BCE33L_RS09330	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS09350	SM00450	Rhodanese Homology Domain
BCE33L_RS09400	SM01133	BCE33L_RS09400
BCE33L_RS09410	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BCE33L_RS09445	SM01011	Aminopeptidase P, N-terminal domain
BCE33L_RS09460	SM00823	Phosphopantetheine attachment site
BCE33L_RS09475	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS09490	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS09505	SM00966	SpoVT / AbrB like domain 
BCE33L_RS09510	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BCE33L_RS09510	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BCE33L_RS09510	SM00493	BCE33L_RS09510
BCE33L_RS09605	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BCE33L_RS09640	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS09645	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS09680	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS09705	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS09710	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS09745	SM00287	Bacterial SH3 domain homologues
BCE33L_RS09755	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS09760	SM00448	cheY-homologous receiver domain
BCE33L_RS09760	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS09765	SM00387	Histidine kinase-like ATPases
BCE33L_RS09765	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS09845	SM00448	cheY-homologous receiver domain
BCE33L_RS09845	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS09850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS09850	SM00387	Histidine kinase-like ATPases
BCE33L_RS09850	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS09920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS09945	SM00460	Transglutaminase/protease-like homologues
BCE33L_RS09970	SM00966	SpoVT / AbrB like domain 
BCE33L_RS09980	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS10015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS10015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS10080	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BCE33L_RS10190	SM00855	Phosphoglycerate mutase family
BCE33L_RS10240	SM00155	Phospholipase D. Active site motifs.
BCE33L_RS10265	SM01091	Transporter associated domain
BCE33L_RS10340	SM00244	prohibitin homologues
BCE33L_RS10345	SM00855	Phosphoglycerate mutase family
BCE33L_RS10360	SM01005	Alanine racemase, C-terminal domain
BCE33L_RS10390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS10525	SM00487	DEAD-like helicases superfamily
BCE33L_RS10525	SM00490	helicase superfamily c-terminal domain
BCE33L_RS10545	SM00829	Enoylreductase
BCE33L_RS10565	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS10580	SM00460	Transglutaminase/protease-like homologues
BCE33L_RS10605	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BCE33L_RS10625	SM00100	Cyclic nucleotide-monophosphate binding domain
BCE33L_RS10625	SM00419	helix_turn_helix, cAMP Regulatory protein
BCE33L_RS10630	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCE33L_RS10640	SM00852	Probable molybdopterin binding domain
BCE33L_RS10705	SM00894	Excalibur calcium-binding domain
BCE33L_RS10755	SM00860	SMI1 / KNR4 family
BCE33L_RS10765	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCE33L_RS10770	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS10800	SM00567	E-Z type HEAT repeats
BCE33L_RS10800	SM00932	Scaffold protein Nfu/NifU N terminal
BCE33L_RS10820	SM00836	DALR anticodon binding domain
BCE33L_RS10820	SM01016	Arginyl tRNA synthetase N terminal dom
BCE33L_RS10830	SM00028	Tetratricopeptide repeats
BCE33L_RS10860	SM00327	von Willebrand factor (vWF) type A domain
BCE33L_RS10875	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS10885	SM00028	Tetratricopeptide repeats
BCE33L_RS10925	SM00857	Resolvase, N terminal domain
BCE33L_RS11010	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS11075	SM00563	Phosphate acyltransferases
BCE33L_RS11185	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCE33L_RS11190	SM00421	helix_turn_helix, Lux Regulon
BCE33L_RS11190	SM00448	cheY-homologous receiver domain
BCE33L_RS11200	SM00829	Enoylreductase
BCE33L_RS11255	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS11295	SM01091	Transporter associated domain
BCE33L_RS11310	SM00387	Histidine kinase-like ATPases
BCE33L_RS11310	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS11325	SM00882	Coenzyme A transferase
BCE33L_RS11330	SM00882	Coenzyme A transferase
BCE33L_RS11345	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS11385	SM00219	Tyrosine kinase, catalytic domain
BCE33L_RS11395	SM00014	Acid phosphatase homologues
BCE33L_RS11445	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BCE33L_RS11600	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS11645	SM00823	Phosphopantetheine attachment site
BCE33L_RS11645	SM00824	Thioesterase
BCE33L_RS11650	SM00923	MbtH-like protein
BCE33L_RS11670	SM00411	bacterial (prokaryotic) histone like domain
BCE33L_RS11710	SM00363	S4 RNA-binding domain
BCE33L_RS11715	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BCE33L_RS11720	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS11765	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS11795	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS11815	SM01059	Chloramphenicol acetyltransferase
BCE33L_RS11840	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS11880	SM00357	Cold shock protein domain
BCE33L_RS11905	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS11920	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BCE33L_RS11955	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS11960	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS11970	SM00646	BCE33L_RS11970
BCE33L_RS11980	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS12005	SM00835	Cupin
BCE33L_RS12010	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCE33L_RS12080	SM01207	BCE33L_RS12080
BCE33L_RS12105	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS12115	SM00487	DEAD-like helicases superfamily
BCE33L_RS12115	SM00490	helicase superfamily c-terminal domain
BCE33L_RS12145	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS12165	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS12170	SM00855	Phosphoglycerate mutase family
BCE33L_RS12245	SM00014	Acid phosphatase homologues
BCE33L_RS12250	SM00354	helix_turn _helix lactose operon repressor
BCE33L_RS12320	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS12345	SM00646	BCE33L_RS12345
BCE33L_RS12360	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS12365	SM00052	Putative diguanylate phosphodiesterase
BCE33L_RS12365	SM00091	PAS domain
BCE33L_RS12365	SM00267	diguanylate cyclase
BCE33L_RS12370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS12370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS12370	SM00319	Homologues of the ligand binding domain of Tar
BCE33L_RS12395	SM00450	Rhodanese Homology Domain
BCE33L_RS12395	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS12410	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS12440	SM00878	Biotin carboxylase C-terminal domain
BCE33L_RS12510	SM00387	Histidine kinase-like ATPases
BCE33L_RS12510	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS12515	SM00448	cheY-homologous receiver domain
BCE33L_RS12515	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS12590	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS12590	SM00871	Bacterial transcription activator, effector binding domain
BCE33L_RS12630	SM00342	helix_turn_helix, arabinose operon control protein
BCE33L_RS12645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS12725	SM00448	cheY-homologous receiver domain
BCE33L_RS12725	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS12730	SM00387	Histidine kinase-like ATPases
BCE33L_RS12740	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS12755	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS12785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS12790	SM01209	BCE33L_RS12790
BCE33L_RS12930	SM00091	PAS domain
BCE33L_RS12930	SM00387	Histidine kinase-like ATPases
BCE33L_RS12930	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS12955	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS12965	SM00387	Histidine kinase-like ATPases
BCE33L_RS12965	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS12980	SM00829	Enoylreductase
BCE33L_RS12985	SM00014	Acid phosphatase homologues
BCE33L_RS12990	SM00740	BCE33L_RS12990
BCE33L_RS13050	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS13095	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS13135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS13190	SM00480	DNA polymerase III beta subunit
BCE33L_RS13280	SM00465	GIY-YIG type nucleases (URI domain)
BCE33L_RS13360	SM00014	Acid phosphatase homologues
BCE33L_RS13365	SM00642	Alpha-amylase domain
BCE33L_RS13385	SM00871	Bacterial transcription activator, effector binding domain
BCE33L_RS13410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS13525	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS13545	SM00420	helix_turn_helix, Deoxyribose operon repressor
BCE33L_RS13545	SM01134	BCE33L_RS13545
BCE33L_RS13575	SM00861	Transketolase, pyrimidine binding domain
BCE33L_RS13640	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCE33L_RS13640	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS13675	SM00060	Fibronectin type 3 domain
BCE33L_RS13675	SM00495	Chitin-binding domain type 3
BCE33L_RS13710	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS13775	SM00341	Helicase and RNase D C-terminal
BCE33L_RS13775	SM00487	DEAD-like helicases superfamily
BCE33L_RS13775	SM00490	helicase superfamily c-terminal domain
BCE33L_RS13775	SM00956	BCE33L_RS13775
BCE33L_RS13820	SM01131	BCE33L_RS13820
BCE33L_RS13850	SM01130	BCE33L_RS13850
BCE33L_RS13870	SM00091	PAS domain
BCE33L_RS13870	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS13955	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BCE33L_RS14000	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BCE33L_RS14005	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS14005	SM00387	Histidine kinase-like ATPases
BCE33L_RS14005	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS14010	SM00448	cheY-homologous receiver domain
BCE33L_RS14010	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS14055	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS14225	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS14230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS14300	SM00062	Bacterial periplasmic substrate-binding proteins
BCE33L_RS14305	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS14335	SM00028	Tetratricopeptide repeats
BCE33L_RS14425	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS14475	SM00830	Chorismate mutase type II
BCE33L_RS14510	SM00287	Bacterial SH3 domain homologues
BCE33L_RS14565	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS14585	SM01133	BCE33L_RS14585
BCE33L_RS14620	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS14640	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BCE33L_RS14655	SM00346	helix_turn_helix isocitrate lyase regulation
BCE33L_RS14675	SM00098	Alkaline phosphatase homologues
BCE33L_RS14685	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS14710	SM00850	LytTr DNA-binding domain
BCE33L_RS14825	SM01060	BCE33L_RS14825
BCE33L_RS14835	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS14850	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS14890	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS14905	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS14910	SM00889	Elongation factor G, domain IV
BCE33L_RS14935	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS14940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS14950	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS14975	SM00342	helix_turn_helix, arabinose operon control protein
BCE33L_RS14975	SM00871	Bacterial transcription activator, effector binding domain
BCE33L_RS15000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS15015	SM00387	Histidine kinase-like ATPases
BCE33L_RS15015	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS15020	SM00448	cheY-homologous receiver domain
BCE33L_RS15020	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS15080	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS15140	SM00797	Allophanate hydrolase subunit 2
BCE33L_RS15145	SM00796	Allophanate hydrolase subunit 1
BCE33L_RS15150	SM00346	helix_turn_helix isocitrate lyase regulation
BCE33L_RS15175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS15230	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS15300	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS15315	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS15330	SM00870	BCE33L_RS15330
BCE33L_RS15335	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS15375	SM00448	cheY-homologous receiver domain
BCE33L_RS15380	SM00387	Histidine kinase-like ATPases
BCE33L_RS15435	SM01060	BCE33L_RS15435
BCE33L_RS15515	SM01058	CarD-like/TRCF domain
BCE33L_RS15530	SM00155	Phospholipase D. Active site motifs.
BCE33L_RS15570	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS15585	SM00421	helix_turn_helix, Lux Regulon
BCE33L_RS15585	SM00448	cheY-homologous receiver domain
BCE33L_RS15600	SM00226	Low molecular weight phosphatase family
BCE33L_RS15615	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS15625	SM00028	Tetratricopeptide repeats
BCE33L_RS15645	SM00344	helix_turn_helix ASNC type
BCE33L_RS15680	SM00342	helix_turn_helix, arabinose operon control protein
BCE33L_RS15710	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS15790	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS15805	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS15840	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS15850	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS15865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS15865	SM00387	Histidine kinase-like ATPases
BCE33L_RS15865	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS15870	SM00448	cheY-homologous receiver domain
BCE33L_RS15870	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS15880	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS16005	SM00342	helix_turn_helix, arabinose operon control protein
BCE33L_RS16015	SM00860	SMI1 / KNR4 family
BCE33L_RS16035	SM00287	Bacterial SH3 domain homologues
BCE33L_RS16035	SM00644	BCE33L_RS16035
BCE33L_RS16100	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS16165	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS16215	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS16230	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS16250	SM00387	Histidine kinase-like ATPases
BCE33L_RS16250	SM00421	helix_turn_helix, Lux Regulon
BCE33L_RS16250	SM00448	cheY-homologous receiver domain
BCE33L_RS16305	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS16320	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS16385	SM01266	BCE33L_RS16385
BCE33L_RS16395	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS16445	SM00028	Tetratricopeptide repeats
BCE33L_RS16470	SM01091	Transporter associated domain
BCE33L_RS16475	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS16550	SM01350	BCE33L_RS16550
BCE33L_RS16555	SM00861	Transketolase, pyrimidine binding domain
BCE33L_RS16570	SM00829	Enoylreductase
BCE33L_RS16585	SM00829	Enoylreductase
BCE33L_RS16610	SM01276	BCE33L_RS16610
BCE33L_RS16615	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS16615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS16685	SM00914	BCE33L_RS16685
BCE33L_RS16720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS16720	SM00866	BCE33L_RS16720
BCE33L_RS16760	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS16830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS16835	SM00636	BCE33L_RS16835
BCE33L_RS16890	SM00871	Bacterial transcription activator, effector binding domain
BCE33L_RS16910	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS17030	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS17035	SM00829	Enoylreductase
BCE33L_RS17160	SM00829	Enoylreductase
BCE33L_RS17175	SM00855	Phosphoglycerate mutase family
BCE33L_RS17185	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BCE33L_RS17185	SM00534	ATPase domain of DNA mismatch repair MUTS family
BCE33L_RS17260	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS17265	SM00829	Enoylreductase
BCE33L_RS17275	SM00028	Tetratricopeptide repeats
BCE33L_RS17350	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BCE33L_RS17400	SM00479	BCE33L_RS17400
BCE33L_RS17405	SM00357	Cold shock protein domain
BCE33L_RS17430	SM01022	BCE33L_RS17430
BCE33L_RS17540	SM00852	Probable molybdopterin binding domain
BCE33L_RS17555	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCE33L_RS17575	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BCE33L_RS17575	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BCE33L_RS17680	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS17695	SM00434	DNA Topoisomerase IV
BCE33L_RS17700	SM00387	Histidine kinase-like ATPases
BCE33L_RS17700	SM00433	TopoisomeraseII
BCE33L_RS17710	SM00881	CoA binding domain
BCE33L_RS17715	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCE33L_RS17720	SM00448	cheY-homologous receiver domain
BCE33L_RS17720	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS17735	SM01207	BCE33L_RS17735
BCE33L_RS17750	SM00257	Lysin motif
BCE33L_RS17750	SM00636	BCE33L_RS17750
BCE33L_RS17770	SM00479	BCE33L_RS17770
BCE33L_RS17785	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS17830	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BCE33L_RS17895	SM00644	BCE33L_RS17895
BCE33L_RS17895	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
BCE33L_RS17900	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BCE33L_RS17915	SM00091	PAS domain
BCE33L_RS17915	SM00387	Histidine kinase-like ATPases
BCE33L_RS17915	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS17945	SM01058	CarD-like/TRCF domain
BCE33L_RS18045	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS18105	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS18110	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS18125	SM00861	Transketolase, pyrimidine binding domain
BCE33L_RS18140	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS18145	SM00062	Bacterial periplasmic substrate-binding proteins
BCE33L_RS18160	SM00857	Resolvase, N terminal domain
BCE33L_RS18220	SM00287	Bacterial SH3 domain homologues
BCE33L_RS18220	SM00644	BCE33L_RS18220
BCE33L_RS18440	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS18490	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS18510	SM01230	BCE33L_RS18510
BCE33L_RS18515	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS18535	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS18570	SM00287	Bacterial SH3 domain homologues
BCE33L_RS18585	SM00420	helix_turn_helix, Deoxyribose operon repressor
BCE33L_RS18585	SM01134	BCE33L_RS18585
BCE33L_RS18615	SM00636	BCE33L_RS18615
BCE33L_RS18630	SM00411	bacterial (prokaryotic) histone like domain
BCE33L_RS18660	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS18685	SM00342	helix_turn_helix, arabinose operon control protein
BCE33L_RS18695	SM00478	endonuclease III
BCE33L_RS18730	SM00052	Putative diguanylate phosphodiesterase
BCE33L_RS18730	SM00091	PAS domain
BCE33L_RS18730	SM00267	diguanylate cyclase
BCE33L_RS18755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS18765	SM00148	Phospholipase C, catalytic domain (part); domain X
BCE33L_RS18775	SM00257	Lysin motif
BCE33L_RS18810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS18835	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS18840	SM00853	MutL C terminal dimerisation domain
BCE33L_RS18840	SM01340	BCE33L_RS18840
BCE33L_RS18845	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BCE33L_RS18845	SM00534	ATPase domain of DNA mismatch repair MUTS family
BCE33L_RS18860	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCE33L_RS18890	SM00322	K homology RNA-binding domain
BCE33L_RS18890	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCE33L_RS18900	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS18905	SM00852	Probable molybdopterin binding domain
BCE33L_RS18955	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS18965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS18965	SM00866	BCE33L_RS18965
BCE33L_RS18970	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS18970	SM00843	BCE33L_RS18970
BCE33L_RS18985	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS18995	SM01130	BCE33L_RS18995
BCE33L_RS19005	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BCE33L_RS19035	SM00316	Ribosomal protein S1-like RNA-binding domain
BCE33L_RS19035	SM00322	K homology RNA-binding domain
BCE33L_RS19040	SM01387	BCE33L_RS19040
BCE33L_RS19045	SM00904	Riboflavin kinase
BCE33L_RS19080	SM00316	Ribosomal protein S1-like RNA-binding domain
BCE33L_RS19080	SM00322	K homology RNA-binding domain
BCE33L_RS19090	SM00479	BCE33L_RS19090
BCE33L_RS19090	SM00481	DNA polymerase alpha chain like domain
BCE33L_RS19100	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCE33L_RS19145	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS19145	SM01086	C-terminal, D2-small domain, of ClpB protein
BCE33L_RS19165	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BCE33L_RS19165	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BCE33L_RS19165	SM00493	BCE33L_RS19165
BCE33L_RS19175	SM00881	CoA binding domain
BCE33L_RS19225	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS19225	SM00962	SRP54-type protein, GTPase domain
BCE33L_RS19225	SM00963	SRP54-type protein, helical bundle domain
BCE33L_RS19235	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS19235	SM00962	SRP54-type protein, GTPase domain
BCE33L_RS19235	SM00963	SRP54-type protein, helical bundle domain
BCE33L_RS19240	SM00968	SMC proteins Flexible Hinge Domain
BCE33L_RS19245	SM00358	Double-stranded RNA binding motif
BCE33L_RS19245	SM00535	Ribonuclease III family
BCE33L_RS19255	SM00822	BCE33L_RS19255
BCE33L_RS19260	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BCE33L_RS19275	SM00487	DEAD-like helicases superfamily
BCE33L_RS19275	SM00490	helicase superfamily c-terminal domain
BCE33L_RS19280	SM01120	BCE33L_RS19280
BCE33L_RS19280	SM01121	BCE33L_RS19280
BCE33L_RS19300	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BCE33L_RS19315	SM00220	Serine/Threonine protein kinases, catalytic domain
BCE33L_RS19315	SM00740	BCE33L_RS19315
BCE33L_RS19320	SM00331	Sigma factor PP2C-like phosphatases
BCE33L_RS19320	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BCE33L_RS19345	SM00487	DEAD-like helicases superfamily
BCE33L_RS19345	SM00490	helicase superfamily c-terminal domain
BCE33L_RS19355	SM01409	BCE33L_RS19355
BCE33L_RS19360	SM00072	Guanylate kinase homologues.
BCE33L_RS19375	SM00831	Cation transporter/ATPase, N-terminus
BCE33L_RS19420	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BCE33L_RS19435	SM00851	MGS-like domain
BCE33L_RS19435	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BCE33L_RS19435	SM01209	BCE33L_RS19435
BCE33L_RS19440	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BCE33L_RS19465	SM00363	S4 RNA-binding domain
BCE33L_RS19490	SM00363	S4 RNA-binding domain
BCE33L_RS19535	SM00864	Tubulin/FtsZ family, GTPase domain
BCE33L_RS19535	SM00865	Tubulin/FtsZ family, C-terminal domain
BCE33L_RS19540	SM00842	Cell division protein FtsA
BCE33L_RS19580	SM00740	BCE33L_RS19580
BCE33L_RS19585	SM00740	BCE33L_RS19585
BCE33L_RS19615	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
BCE33L_RS19635	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCE33L_RS19675	SM00855	Phosphoglycerate mutase family
BCE33L_RS19740	SM00878	Biotin carboxylase C-terminal domain
BCE33L_RS19760	SM00670	Large family of predicted nucleotide-binding domains
BCE33L_RS19785	SM00838	Elongation factor G C-terminus
BCE33L_RS19865	SM00861	Transketolase, pyrimidine binding domain
BCE33L_RS19895	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS19960	SM00052	Putative diguanylate phosphodiesterase
BCE33L_RS20055	SM00387	Histidine kinase-like ATPases
BCE33L_RS20055	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS20070	SM00354	helix_turn _helix lactose operon repressor
BCE33L_RS20090	SM00642	Alpha-amylase domain
BCE33L_RS20095	SM00642	Alpha-amylase domain
BCE33L_RS20100	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS20135	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS20225	SM01007	Class II Aldolase and Adducin N-terminal domain
BCE33L_RS20250	SM00267	diguanylate cyclase
BCE33L_RS20285	SM01061	CAT RNA binding domain
BCE33L_RS20295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS20295	SM00866	BCE33L_RS20295
BCE33L_RS20310	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS20415	SM00387	Histidine kinase-like ATPases
BCE33L_RS20425	SM00936	Penicillin-binding protein 5, C-terminal domain 
BCE33L_RS20430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS20435	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS20460	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS20480	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BCE33L_RS20575	SM00354	helix_turn _helix lactose operon repressor
BCE33L_RS20595	SM00704	CDGSH-type zinc finger. Function unknown.
BCE33L_RS20625	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCE33L_RS20625	SM00876	Biotin and Thiamin Synthesis associated domain
BCE33L_RS20675	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS20710	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BCE33L_RS20725	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS20750	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS20800	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS20810	SM00062	Bacterial periplasmic substrate-binding proteins
BCE33L_RS20810	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BCE33L_RS20855	SM00861	Transketolase, pyrimidine binding domain
BCE33L_RS20875	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BCE33L_RS20890	SM00091	PAS domain
BCE33L_RS20890	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS20930	SM00448	cheY-homologous receiver domain
BCE33L_RS20935	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCE33L_RS20950	SM00363	S4 RNA-binding domain
BCE33L_RS20955	SM00861	Transketolase, pyrimidine binding domain
BCE33L_RS20990	SM00878	Biotin carboxylase C-terminal domain
BCE33L_RS21040	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS21060	SM00841	Elongation factor P, C-terminal
BCE33L_RS21060	SM01185	BCE33L_RS21060
BCE33L_RS21095	SM00529	Helix-turn-helix diphteria tox regulatory element
BCE33L_RS21125	SM00450	Rhodanese Homology Domain
BCE33L_RS21135	SM00354	helix_turn _helix lactose operon repressor
BCE33L_RS21190	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS21195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS21225	SM00487	DEAD-like helicases superfamily
BCE33L_RS21225	SM00490	helicase superfamily c-terminal domain
BCE33L_RS21260	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BCE33L_RS21295	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS21345	SM01018	B12 binding domain
BCE33L_RS21375	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS21385	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS21425	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS21490	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS21505	SM00518	AP endonuclease family 2
BCE33L_RS21510	SM00487	DEAD-like helicases superfamily
BCE33L_RS21510	SM00490	helicase superfamily c-terminal domain
BCE33L_RS21545	SM00400	zinc finger
BCE33L_RS21545	SM00493	BCE33L_RS21545
BCE33L_RS21545	SM00766	DNA primase DnaG DnaB-binding
BCE33L_RS21565	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCE33L_RS21600	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCE33L_RS21635	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCE33L_RS21650	SM00271	DnaJ molecular chaperone homology domain
BCE33L_RS21670	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCE33L_RS21680	SM00838	Elongation factor G C-terminus
BCE33L_RS21710	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS21720	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BCE33L_RS21740	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCE33L_RS21750	SM01103	BCE33L_RS21750
BCE33L_RS21815	SM00954	Region found in RelA / SpoT proteins
BCE33L_RS21825	SM00098	Alkaline phosphatase homologues
BCE33L_RS21850	SM00855	Phosphoglycerate mutase family
BCE33L_RS21895	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS21920	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22015	SM00732	Likely ribonuclease with RNase H fold.
BCE33L_RS22025	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BCE33L_RS22060	SM00028	Tetratricopeptide repeats
BCE33L_RS22080	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22120	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCE33L_RS22120	SM00954	Region found in RelA / SpoT proteins
BCE33L_RS22165	SM01323	BCE33L_RS22165
BCE33L_RS22185	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22190	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BCE33L_RS22210	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS22225	SM00257	Lysin motif
BCE33L_RS22275	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22280	SM00387	Histidine kinase-like ATPases
BCE33L_RS22285	SM00448	cheY-homologous receiver domain
BCE33L_RS22285	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS22295	SM01317	BCE33L_RS22295
BCE33L_RS22385	SM00257	Lysin motif
BCE33L_RS22395	SM01004	Delta-aminolevulinic acid dehydratase
BCE33L_RS22420	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS22435	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22435	SM00464	Found in ATP-dependent protease La (LON)
BCE33L_RS22440	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22445	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22445	SM00994	ClpX C4-type zinc finger
BCE33L_RS22445	SM01086	C-terminal, D2-small domain, of ClpB protein
BCE33L_RS22515	SM00857	Resolvase, N terminal domain
BCE33L_RS22555	SM00909	Sporulation and spore germination
BCE33L_RS22570	SM00421	helix_turn_helix, Lux Regulon
BCE33L_RS22610	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22615	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22625	SM00342	helix_turn_helix, arabinose operon control protein
BCE33L_RS22625	SM00448	cheY-homologous receiver domain
BCE33L_RS22640	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS22665	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22715	SM00465	GIY-YIG type nucleases (URI domain)
BCE33L_RS22725	SM00893	Electron transfer flavoprotein domain
BCE33L_RS22730	SM00893	Electron transfer flavoprotein domain
BCE33L_RS22785	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22790	SM00387	Histidine kinase-like ATPases
BCE33L_RS22790	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS22795	SM00448	cheY-homologous receiver domain
BCE33L_RS22795	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS22810	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BCE33L_RS22830	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS22845	SM00725	NEAr Transporter domain
BCE33L_RS22850	SM00725	NEAr Transporter domain
BCE33L_RS22860	SM00363	S4 RNA-binding domain
BCE33L_RS22870	SM00463	Small MutS-related domain
BCE33L_RS22870	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BCE33L_RS22870	SM00534	ATPase domain of DNA mismatch repair MUTS family
BCE33L_RS22875	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BCE33L_RS22875	SM00481	DNA polymerase alpha chain like domain
BCE33L_RS22875	SM00483	DNA polymerase X family
BCE33L_RS22915	SM00873	B3/4 domain
BCE33L_RS22915	SM00874	tRNA synthetase B5 domain
BCE33L_RS22915	SM00896	Ferredoxin-fold anticodon binding domain
BCE33L_RS22925	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BCE33L_RS22990	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BCE33L_RS23000	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS23025	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BCE33L_RS23040	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BCE33L_RS23040	SM01232	BCE33L_RS23040
BCE33L_RS23045	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BCE33L_RS23045	SM00474	3'-5' exonuclease
BCE33L_RS23045	SM00475	5'-3' exonuclease
BCE33L_RS23045	SM00482	DNA polymerase A domain
BCE33L_RS23050	SM00091	PAS domain
BCE33L_RS23050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS23050	SM00387	Histidine kinase-like ATPases
BCE33L_RS23050	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS23055	SM00448	cheY-homologous receiver domain
BCE33L_RS23055	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS23075	SM01329	BCE33L_RS23075
BCE33L_RS23125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS23130	SM00919	Malic enzyme, NAD binding domain
BCE33L_RS23130	SM01274	BCE33L_RS23130
BCE33L_RS23135	SM00481	DNA polymerase alpha chain like domain
BCE33L_RS23175	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCE33L_RS23185	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS23240	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS23250	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BCE33L_RS23250	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BCE33L_RS23365	SM00981	BCE33L_RS23365
BCE33L_RS23405	SM00363	S4 RNA-binding domain
BCE33L_RS23405	SM01390	BCE33L_RS23405
BCE33L_RS23455	SM00363	S4 RNA-binding domain
BCE33L_RS23485	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCE33L_RS23505	SM00448	cheY-homologous receiver domain
BCE33L_RS23505	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS23510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS23510	SM00387	Histidine kinase-like ATPases
BCE33L_RS23510	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS23515	SM00248	ankyrin repeats
BCE33L_RS23550	SM00354	helix_turn _helix lactose operon repressor
BCE33L_RS23625	SM00843	BCE33L_RS23625
BCE33L_RS23665	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS23685	SM00642	Alpha-amylase domain
BCE33L_RS23705	SM00420	helix_turn_helix, Deoxyribose operon repressor
BCE33L_RS23710	SM00363	S4 RNA-binding domain
BCE33L_RS23730	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS23755	SM01058	CarD-like/TRCF domain
BCE33L_RS23790	SM00852	Probable molybdopterin binding domain
BCE33L_RS23805	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCE33L_RS23825	SM00450	Rhodanese Homology Domain
BCE33L_RS23910	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS23930	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCE33L_RS23940	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS23995	SM00014	Acid phosphatase homologues
BCE33L_RS24010	SM00852	Probable molybdopterin binding domain
BCE33L_RS24080	SM00420	helix_turn_helix, Deoxyribose operon repressor
BCE33L_RS24080	SM01134	BCE33L_RS24080
BCE33L_RS24090	SM00387	Histidine kinase-like ATPases
BCE33L_RS24095	SM00387	Histidine kinase-like ATPases
BCE33L_RS24095	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS24125	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS24180	SM01234	BCE33L_RS24180
BCE33L_RS24185	SM00947	Carbonic anhydrase
BCE33L_RS24205	SM00894	Excalibur calcium-binding domain
BCE33L_RS24260	SM00899	BCE33L_RS24260
BCE33L_RS24270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS24270	SM00387	Histidine kinase-like ATPases
BCE33L_RS24270	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS24275	SM00448	cheY-homologous receiver domain
BCE33L_RS24275	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS24305	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BCE33L_RS24340	SM00342	helix_turn_helix, arabinose operon control protein
BCE33L_RS24355	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS24360	SM00342	helix_turn_helix, arabinose operon control protein
BCE33L_RS24360	SM00871	Bacterial transcription activator, effector binding domain
BCE33L_RS24370	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS24380	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCE33L_RS24385	SM00448	cheY-homologous receiver domain
BCE33L_RS24385	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS24390	SM00387	Histidine kinase-like ATPases
BCE33L_RS24405	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS24425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCE33L_RS24425	SM00866	BCE33L_RS24425
BCE33L_RS24470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS24470	SM00387	Histidine kinase-like ATPases
BCE33L_RS24470	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS24475	SM00448	cheY-homologous receiver domain
BCE33L_RS24475	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS24480	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BCE33L_RS24520	SM00357	Cold shock protein domain
BCE33L_RS24560	SM00642	Alpha-amylase domain
BCE33L_RS24735	SM00316	Ribosomal protein S1-like RNA-binding domain
BCE33L_RS24780	SM01298	BCE33L_RS24780
BCE33L_RS24785	SM00479	BCE33L_RS24785
BCE33L_RS24875	SM00871	Bacterial transcription activator, effector binding domain
BCE33L_RS24935	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS25050	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS25065	SM00855	Phosphoglycerate mutase family
BCE33L_RS25075	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCE33L_RS25120	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS25140	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS25140	SM00930	BCE33L_RS25140
BCE33L_RS25160	SM00493	BCE33L_RS25160
BCE33L_RS25225	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS25235	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS25280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS25280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS25345	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS25345	SM00387	Histidine kinase-like ATPases
BCE33L_RS25345	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS25350	SM00448	cheY-homologous receiver domain
BCE33L_RS25350	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS25365	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS25385	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS25410	SM00448	cheY-homologous receiver domain
BCE33L_RS25410	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS25415	SM00387	Histidine kinase-like ATPases
BCE33L_RS25415	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS25435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS25435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS25440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS25440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS25460	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS25550	SM01276	BCE33L_RS25550
BCE33L_RS25585	SM00363	S4 RNA-binding domain
BCE33L_RS25595	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
BCE33L_RS25600	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS25650	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCE33L_RS25660	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS25680	SM00448	cheY-homologous receiver domain
BCE33L_RS25680	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS25690	SM00316	Ribosomal protein S1-like RNA-binding domain
BCE33L_RS25690	SM00357	Cold shock protein domain
BCE33L_RS25690	SM00955	BCE33L_RS25690
BCE33L_RS25720	SM01192	BCE33L_RS25720
BCE33L_RS25720	SM01193	BCE33L_RS25720
BCE33L_RS25740	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BCE33L_RS25775	SM00028	Tetratricopeptide repeats
BCE33L_RS25865	SM00028	Tetratricopeptide repeats
BCE33L_RS25905	SM00487	DEAD-like helicases superfamily
BCE33L_RS25905	SM00490	helicase superfamily c-terminal domain
BCE33L_RS25915	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS25940	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS25955	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS25965	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS25975	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS25985	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCE33L_RS25985	SM00245	tail specific protease
BCE33L_RS25995	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS26010	SM00937	BCE33L_RS26010
BCE33L_RS26015	SM00957	SecA DEAD-like domain
BCE33L_RS26015	SM00958	SecA preprotein cross-linking domain
BCE33L_RS26025	SM00357	Cold shock protein domain
BCE33L_RS26035	SM00487	DEAD-like helicases superfamily
BCE33L_RS26035	SM00490	helicase superfamily c-terminal domain
BCE33L_RS26075	SM00984	UDP binding domain
BCE33L_RS26090	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS26095	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BCE33L_RS26255	SM00287	Bacterial SH3 domain homologues
BCE33L_RS26285	SM00287	Bacterial SH3 domain homologues
BCE33L_RS26315	SM00487	DEAD-like helicases superfamily
BCE33L_RS26315	SM00490	helicase superfamily c-terminal domain
BCE33L_RS26365	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS26375	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS26400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS26400	SM00387	Histidine kinase-like ATPases
BCE33L_RS26400	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS26405	SM00448	cheY-homologous receiver domain
BCE33L_RS26405	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS26435	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS26445	SM00984	UDP binding domain
BCE33L_RS26535	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS26540	SM00850	LytTr DNA-binding domain
BCE33L_RS26620	SM00052	Putative diguanylate phosphodiesterase
BCE33L_RS26620	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BCE33L_RS26620	SM00091	PAS domain
BCE33L_RS26620	SM00267	diguanylate cyclase
BCE33L_RS26640	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS26710	SM00226	Low molecular weight phosphatase family
BCE33L_RS26725	SM00903	Flavin reductase like domain
BCE33L_RS26765	SM00937	BCE33L_RS26765
BCE33L_RS26780	SM00357	Cold shock protein domain
BCE33L_RS26780	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS26780	SM00959	Rho termination factor, N-terminal domain
BCE33L_RS26800	SM00448	cheY-homologous receiver domain
BCE33L_RS26850	SM00155	Phospholipase D. Active site motifs.
BCE33L_RS26860	SM00052	Putative diguanylate phosphodiesterase
BCE33L_RS26860	SM00267	diguanylate cyclase
BCE33L_RS26870	SM00530	Helix-turn-helix XRE-family like proteins 
BCE33L_RS26875	SM00421	helix_turn_helix, Lux Regulon
BCE33L_RS26875	SM00448	cheY-homologous receiver domain
BCE33L_RS26890	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS26930	SM00836	DALR anticodon binding domain
BCE33L_RS26930	SM01016	Arginyl tRNA synthetase N terminal dom
BCE33L_RS26975	SM00422	helix_turn_helix, mercury resistance
BCE33L_RS27005	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCE33L_RS27015	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS27060	SM00936	Penicillin-binding protein 5, C-terminal domain 
BCE33L_RS27105	SM00986	Uracil DNA glycosylase superfamily
BCE33L_RS27105	SM00987	UreE urease accessory protein, C-terminal domain 
BCE33L_RS27115	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS27125	SM00354	helix_turn _helix lactose operon repressor
BCE33L_RS27155	SM00100	Cyclic nucleotide-monophosphate binding domain
BCE33L_RS27165	SM00421	helix_turn_helix, Lux Regulon
BCE33L_RS27165	SM00448	cheY-homologous receiver domain
BCE33L_RS27170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCE33L_RS27180	SM00267	diguanylate cyclase
BCE33L_RS27195	SM00448	cheY-homologous receiver domain
BCE33L_RS27195	SM00850	LytTr DNA-binding domain
BCE33L_RS27225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCE33L_RS27250	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS27305	SM00448	cheY-homologous receiver domain
BCE33L_RS27305	SM00850	LytTr DNA-binding domain
BCE33L_RS27310	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCE33L_RS27310	SM00387	Histidine kinase-like ATPases
BCE33L_RS27365	SM00487	DEAD-like helicases superfamily
BCE33L_RS27365	SM00490	helicase superfamily c-terminal domain
BCE33L_RS27375	SM01240	BCE33L_RS27375
BCE33L_RS27410	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCE33L_RS27415	SM00849	Metallo-beta-lactamase superfamily
BCE33L_RS27430	SM00091	PAS domain
BCE33L_RS27430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCE33L_RS27430	SM00387	Histidine kinase-like ATPases
BCE33L_RS27430	SM00388	His Kinase A (phosphoacceptor) domain
BCE33L_RS27435	SM00448	cheY-homologous receiver domain
BCE33L_RS27435	SM00862	Transcriptional regulatory protein, C terminal
BCE33L_RS27460	SM00788	Adenylosuccinate synthetase
BCE33L_RS27475	SM00267	diguanylate cyclase
BCE33L_RS27520	SM00470	ParB-like nuclease domain
BCE33L_RS27530	SM00470	ParB-like nuclease domain
BCE33L_RS27540	SM01228	BCE33L_RS27540
BCE33L_RS27550	SM00393	Putative single-stranded nucleic acids-binding domain
BCE33L_RS27550	SM01245	BCE33L_RS27550
BCE33L_RS27990	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS28180	SM00662	RNA polymerases D
BCE33L_RS28395	SM00829	Enoylreductase
BCE33L_RS29120	SM00532	Ligase N family
BCE33L_RS29440	SM00642	Alpha-amylase domain
BCE33L_RS29785	SM00382	ATPases associated with a variety of cellular activities
BCE33L_RS30145	SM00433	TopoisomeraseII
BCE33L_RS30155	SM00434	DNA Topoisomerase IV
BCE33L_RS30230	SM00465	GIY-YIG type nucleases (URI domain)
BCE33L_RS30255	SM00860	SMI1 / KNR4 family
