locus-tag class description BF28_RS00005 PF07949 YbbR-like protein BF28_RS00130 PF02361 Cobalt transport protein BF28_RS00360 PF14089 KinB-signalling pathway activation in sporulation BF28_RS00450 PF00573 Ribosomal protein L4/L1 family BF28_RS00490 PF04997 RNA polymerase Rpb1, domain 1 BF28_RS00490 PF05000 RNA polymerase Rpb1, domain 4 BF28_RS00490 PF00623 RNA polymerase Rpb1, domain 2 BF28_RS00490 PF04998 RNA polymerase Rpb1, domain 5 BF28_RS00490 PF04983 RNA polymerase Rpb1, domain 3 BF28_RS00495 PF04997 RNA polymerase Rpb1, domain 1 BF28_RS00495 PF00623 RNA polymerase Rpb1, domain 2 BF28_RS00495 PF04983 RNA polymerase Rpb1, domain 3 BF28_RS00495 PF04998 RNA polymerase Rpb1, domain 5 BF28_RS00495 PF05000 RNA polymerase Rpb1, domain 4 BF28_RS00505 PF04998 RNA polymerase Rpb1, domain 5 BF28_RS00505 PF05000 RNA polymerase Rpb1, domain 4 BF28_RS00505 PF04983 RNA polymerase Rpb1, domain 3 BF28_RS00505 PF00623 RNA polymerase Rpb1, domain 2 BF28_RS00505 PF04997 RNA polymerase Rpb1, domain 1 BF28_RS00575 PF00588 SpoU rRNA Methylase family BF28_RS00575 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF28_RS00635 PF07724 AAA domain (Cdc48 subfamily) BF28_RS00635 PF00004 ATPase family associated with various cellular activities (AAA) BF28_RS00635 PF02861 Clp amino terminal domain, pathogenicity island component BF28_RS00635 PF17871 AAA lid domain BF28_RS00635 PF10431 C-terminal, D2-small domain, of ClpB protein BF28_RS00760 PF00291 Pyridoxal-phosphate dependent enzyme BF28_RS01055 PF00521 DNA gyrase/topoisomerase IV, subunit A BF28_RS01055 PF03989 DNA gyrase C-terminal domain, beta-propeller BF28_RS01125 PF02096 60Kd inner membrane protein BF28_RS01180 PF02272 DHHA1 domain BF28_RS01180 PF01368 DHH family BF28_RS01190 PF03796 DnaB-like helicase C terminal domain BF28_RS01190 PF00772 DnaB-like helicase N terminal domain BF28_RS01275 PF00271 Helicase conserved C-terminal domain BF28_RS01275 PF00270 DEAD/DEAH box helicase BF28_RS01275 PF03880 DbpA RNA binding domain BF28_RS01370 PF01594 AI-2E family transporter BF28_RS01470 PF07690 Major Facilitator Superfamily BF28_RS01490 PF00990 Diguanylate cyclase, GGDEF domain BF28_RS01805 PF03851 UV-endonuclease UvdE BF28_RS01820 PF13091 PLD-like domain BF28_RS01820 PF13396 Phospholipase_D-nuclease N-terminal BF28_RS01830 PF02803 Thiolase, C-terminal domain BF28_RS01830 PF00108 Thiolase, N-terminal domain BF28_RS01915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF28_RS01915 PF07497 Rho termination factor, RNA-binding domain BF28_RS01915 PF07498 Rho termination factor, N-terminal domain BF28_RS01935 PF13847 Methyltransferase domain BF28_RS01935 PF17827 PrmC N-terminal domain BF28_RS02040 PF03707 Bacterial signalling protein N terminal repeat BF28_RS02040 PF00563 EAL domain BF28_RS02040 PF00990 Diguanylate cyclase, GGDEF domain BF28_RS02170 PF00132 Bacterial transferase hexapeptide (six repeats) BF28_RS02335 PF00176 SNF2 family N-terminal domain BF28_RS02335 PF12419 SNF2 Helicase protein BF28_RS02335 PF00271 Helicase conserved C-terminal domain BF28_RS02405 PF00884 Sulfatase BF28_RS02530 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF28_RS02535 PF00491 Arginase family BF28_RS02540 PF02595 Glycerate kinase family BF28_RS02610 PF01522 Polysaccharide deacetylase BF28_RS02615 PF14089 KinB-signalling pathway activation in sporulation BF28_RS02620 PF17898 Spore germination GerD central core domain BF28_RS02625 PF10609 NUBPL iron-transfer P-loop NTPase BF28_RS02630 PF01520 N-acetylmuramoyl-L-alanine amidase BF28_RS02640 PF00380 Ribosomal protein S9/S16 BF28_RS02645 PF00572 Ribosomal protein L13 BF28_RS02650 PF01416 tRNA pseudouridine synthase BF28_RS02655 PF02361 Cobalt transport protein BF28_RS02660 PF00005 ABC transporter BF28_RS02665 PF00005 ABC transporter BF28_RS02670 PF01196 Ribosomal protein L17 BF28_RS02675 PF01000 RNA polymerase Rpb3/RpoA insert domain BF28_RS02675 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BF28_RS02675 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BF28_RS02680 PF00411 Ribosomal protein S11 BF28_RS02685 PF00416 Ribosomal protein S13/S18 BF28_RS02690 PF00444 Ribosomal protein L36 BF28_RS02695 PF01176 Translation initiation factor 1A / IF-1 BF28_RS02700 PF00557 Metallopeptidase family M24 BF28_RS02705 PF05191 Adenylate kinase, active site lid BF28_RS02710 PF00344 SecY translocase BF28_RS02715 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BF28_RS02720 PF00327 Ribosomal protein L30p/L7e BF28_RS02725 PF03719 Ribosomal protein S5, C-terminal domain BF28_RS02725 PF00333 Ribosomal protein S5, N-terminal domain BF28_RS02730 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BF28_RS02735 PF00347 Ribosomal protein L6 BF28_RS02740 PF00410 Ribosomal protein S8 BF28_RS02745 PF00253 Ribosomal protein S14p/S29e BF28_RS02750 PF00673 ribosomal L5P family C-terminus BF28_RS02750 PF00281 Ribosomal protein L5 BF28_RS02755 PF00467 KOW motif BF28_RS02755 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BF28_RS02760 PF00238 Ribosomal protein L14p/L23e BF28_RS02765 PF00366 Ribosomal protein S17 BF28_RS02770 PF00831 Ribosomal L29 protein BF28_RS02775 PF00252 Ribosomal protein L16p/L10e BF28_RS02780 PF00189 Ribosomal protein S3, C-terminal domain BF28_RS02780 PF07650 KH domain BF28_RS02785 PF00237 Ribosomal protein L22p/L17e BF28_RS02790 PF00203 Ribosomal protein S19 BF28_RS02795 PF00181 Ribosomal Proteins L2, RNA binding domain BF28_RS02795 PF03947 Ribosomal Proteins L2, C-terminal domain BF28_RS02800 PF00276 Ribosomal protein L23 BF28_RS02805 PF00573 Ribosomal protein L4/L1 family BF28_RS02810 PF00297 Ribosomal protein L3 BF28_RS02815 PF00338 Ribosomal protein S10p/S20e BF28_RS02820 PF00009 Elongation factor Tu GTP binding domain BF28_RS02820 PF03144 Elongation factor Tu domain 2 BF28_RS02820 PF03143 Elongation factor Tu C-terminal domain BF28_RS02825 PF14492 Elongation Factor G, domain II BF28_RS02825 PF03764 Elongation factor G, domain IV BF28_RS02825 PF00009 Elongation factor Tu GTP binding domain BF28_RS02825 PF03144 Elongation factor Tu domain 2 BF28_RS02825 PF00679 Elongation factor G C-terminus BF28_RS02830 PF00177 Ribosomal protein S7p/S5e BF28_RS02835 PF00164 Ribosomal protein S12/S23 BF28_RS02840 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BF28_RS02845 PF04998 RNA polymerase Rpb1, domain 5 BF28_RS02845 PF04983 RNA polymerase Rpb1, domain 3 BF28_RS02845 PF00623 RNA polymerase Rpb1, domain 2 BF28_RS02845 PF04997 RNA polymerase Rpb1, domain 1 BF28_RS02845 PF05000 RNA polymerase Rpb1, domain 4 BF28_RS02850 PF04565 RNA polymerase Rpb2, domain 3 BF28_RS02850 PF10385 RNA polymerase beta subunit external 1 domain BF28_RS02850 PF04561 RNA polymerase Rpb2, domain 2 BF28_RS02850 PF04560 RNA polymerase Rpb2, domain 7 BF28_RS02850 PF00562 RNA polymerase Rpb2, domain 6 BF28_RS02850 PF04563 RNA polymerase beta subunit BF28_RS02855 PF05175 Methyltransferase small domain BF28_RS02860 PF00542 Ribosomal protein L7/L12 C-terminal domain BF28_RS02860 PF16320 Ribosomal protein L7/L12 dimerisation domain BF28_RS02865 PF00466 Ribosomal protein L10 BF28_RS02870 PF00687 Ribosomal protein L1p/L10e family BF28_RS02875 PF03946 Ribosomal protein L11, N-terminal domain BF28_RS02875 PF00298 Ribosomal protein L11, RNA binding domain BF28_RS02880 PF00467 KOW motif BF28_RS02880 PF02357 Transcription termination factor nusG BF28_RS02885 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BF28_RS02890 PF00471 Ribosomal protein L33 BF28_RS02895 PF08281 Sigma-70, region 4 BF28_RS02895 PF04542 Sigma-70 region 2 BF28_RS02900 PF05991 YacP-like NYN domain BF28_RS02905 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF28_RS02905 PF00588 SpoU rRNA Methylase family BF28_RS02910 PF00636 Ribonuclease III domain BF28_RS02915 PF01406 tRNA synthetases class I (C) catalytic domain BF28_RS02915 PF09190 DALR domain BF28_RS02920 PF00132 Bacterial transferase hexapeptide (six repeats) BF28_RS02920 PF06426 Serine acetyltransferase, N-terminal BF28_RS02925 PF00749 tRNA synthetases class I (E and Q), catalytic domain BF28_RS02930 PF02542 YgbB family BF28_RS02935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BF28_RS02945 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF28_RS02945 PF10635 DisA bacterial checkpoint controller linker region BF28_RS02950 PF18073 Rubredoxin metal binding domain BF28_RS02955 PF00004 ATPase family associated with various cellular activities (AAA) BF28_RS02955 PF10431 C-terminal, D2-small domain, of ClpB protein BF28_RS02955 PF07724 AAA domain (Cdc48 subfamily) BF28_RS02955 PF17871 AAA lid domain BF28_RS02955 PF02861 Clp amino terminal domain, pathogenicity island component BF28_RS02960 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BF28_RS02965 PF02151 UvrB/uvrC motif BF28_RS02970 PF05848 CtsR N-terminal HTH domain BF28_RS02970 PF17727 CtsR C-terminal dimerization domain BF28_RS03050 PF01336 OB-fold nucleic acid binding domain BF28_RS03050 PF00152 tRNA synthetases class II (D, K and N) BF28_RS03055 PF01207 Dihydrouridine synthase (Dus) BF28_RS03060 PF01381 Helix-turn-helix BF28_RS03065 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BF28_RS03070 PF02152 Dihydroneopterin aldolase BF28_RS03075 PF00809 Pterin binding enzyme BF28_RS03080 PF01063 Amino-transferase class IV BF28_RS03085 PF00117 Glutamine amidotransferase class-I BF28_RS03090 PF00425 chorismate binding enzyme BF28_RS03090 PF04715 Anthranilate synthase component I, N terminal region BF28_RS03095 PF00291 Pyridoxal-phosphate dependent enzyme BF28_RS03100 PF01430 Hsp33 protein BF28_RS03105 PF03309 Type III pantothenate kinase BF28_RS03110 PF00004 ATPase family associated with various cellular activities (AAA) BF28_RS03110 PF17862 AAA+ lid domain BF28_RS03110 PF06480 FtsH Extracellular BF28_RS03110 PF01434 Peptidase family M41 BF28_RS03115 PF00156 Phosphoribosyl transferase domain BF28_RS03120 PF01171 PP-loop family BF28_RS03120 PF09179 TilS substrate binding domain BF28_RS03120 PF11734 TilS substrate C-terminal domain BF28_RS03125 PF07228 Stage II sporulation protein E (SpoIIE) BF28_RS03140 PF00575 S1 RNA binding domain BF28_RS03150 PF09578 Spore cortex protein YabQ (Spore_YabQ) BF28_RS03155 PF07873 YabP family BF28_RS03160 PF01479 S4 domain BF28_RS03165 PF03819 MazG nucleotide pyrophosphohydrolase domain BF28_RS03165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF28_RS03170 PF01943 Polysaccharide biosynthesis protein BF28_RS03170 PF14667 Polysaccharide biosynthesis C-terminal domain BF28_RS03175 PF15714 Stage V sporulation protein T C-terminal, transcription factor BF28_RS03175 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF28_RS03180 PF02559 CarD-like/TRCF domain BF28_RS03180 PF00270 DEAD/DEAH box helicase BF28_RS03180 PF00271 Helicase conserved C-terminal domain BF28_RS03180 PF03461 TRCF domain BF28_RS03180 PF17757 UvrB interaction domain BF28_RS03190 PF01195 Peptidyl-tRNA hydrolase BF28_RS03195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BF28_RS03195 PF14572 Phosphoribosyl synthetase-associated domain BF28_RS03200 PF00483 Nucleotidyl transferase BF28_RS03200 PF00132 Bacterial transferase hexapeptide (six repeats) BF28_RS03205 PF04026 SpoVG BF28_RS03210 PF01042 Endoribonuclease L-PSP BF28_RS03215 PF00156 Phosphoribosyl transferase domain BF28_RS03215 PF09182 Bacterial purine repressor, N-terminal BF28_RS03220 PF00288 GHMP kinases N terminal domain BF28_RS03220 PF08544 GHMP kinases C terminal BF28_RS03225 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF28_RS03230 PF06257 Biofilm formation stimulator VEG BF28_RS03235 PF05582 YabG peptidase U57 BF28_RS03240 PF00398 Ribosomal RNA adenine dimethylase BF28_RS03245 PF13662 Toprim domain BF28_RS03245 PF13331 Domain of unknown function (DUF4093) BF28_RS03250 PF01026 TatD related DNase BF28_RS03255 PF08264 Anticodon-binding domain of tRNA BF28_RS03255 PF09334 tRNA synthetases class I (M) BF28_RS03255 PF01588 Putative tRNA binding domain BF28_RS03260 PF18277 AbrB C-terminal domain BF28_RS03260 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF28_RS03265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF28_RS03270 PF01541 GIY-YIG catalytic domain BF28_RS03275 PF05175 Methyltransferase small domain BF28_RS03280 PF06156 Initiation control protein YabA BF28_RS03285 PF04468 PSP1 C-terminal conserved region BF28_RS03290 PF09115 DNA polymerase III, delta subunit, C terminal BF28_RS03295 PF02223 Thymidylate kinase BF28_RS03300 PF01276 Orn/Lys/Arg decarboxylase, major domain BF28_RS03300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF28_RS03325 PF07441 SigmaK-factor processing regulatory protein BofA BF28_RS03330 PF10704 Protein of unknown function (DUF2508) BF28_RS03335 PF02132 RecR protein BF28_RS03335 PF13662 Toprim domain BF28_RS03340 PF02575 YbaB/EbfC DNA-binding family BF28_RS03345 PF12169 DNA polymerase III subunits gamma and tau domain III BF28_RS03350 PF14437 MafB19-like deaminase BF28_RS03360 PF00857 Isochorismatase family BF28_RS03365 PF01712 Deoxynucleoside kinase BF28_RS03370 PF01712 Deoxynucleoside kinase BF28_RS03385 PF02403 Seryl-tRNA synthetase N-terminal domain BF28_RS03385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF28_RS03390 PF01174 SNO glutamine amidotransferase family BF28_RS03395 PF01680 SOR/SNZ family BF28_RS03400 PF00768 D-alanyl-D-alanine carboxypeptidase BF28_RS03400 PF07943 Penicillin-binding protein 5, C-terminal domain BF28_RS03405 PF00478 IMP dehydrogenase / GMP reductase domain BF28_RS03405 PF00571 CBS domain BF28_RS03410 PF14175 YaaC-like Protein BF28_RS03440 PF00521 DNA gyrase/topoisomerase IV, subunit A BF28_RS03440 PF03989 DNA gyrase C-terminal domain, beta-propeller BF28_RS03445 PF00204 DNA gyrase B BF28_RS03445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS03445 PF00986 DNA gyrase B subunit, carboxyl terminus BF28_RS03445 PF01751 Toprim domain BF28_RS03450 PF02463 RecF/RecN/SMC N terminal domain BF28_RS03460 PF00712 DNA polymerase III beta subunit, N-terminal domain BF28_RS03460 PF02768 DNA polymerase III beta subunit, C-terminal domain BF28_RS03460 PF02767 DNA polymerase III beta subunit, central domain BF28_RS03465 PF08299 Bacterial dnaA protein helix-turn-helix BF28_RS03465 PF11638 DnaA N-terminal domain BF28_RS03465 PF00308 Bacterial dnaA protein BF28_RS03470 PF00468 Ribosomal protein L34 BF28_RS03475 PF00825 Ribonuclease P BF28_RS03480 PF02096 60Kd inner membrane protein BF28_RS03485 PF14804 Jag N-terminus BF28_RS03485 PF01424 R3H domain BF28_RS03490 PF10396 GTP-binding protein TrmE N-terminus BF28_RS03490 PF12631 MnmE helical domain BF28_RS03490 PF01926 50S ribosome-binding GTPase BF28_RS03495 PF01134 Glucose inhibited division protein A BF28_RS03495 PF13932 GidA associated domain BF28_RS03500 PF02527 rRNA small subunit methyltransferase G BF28_RS03505 PF02195 ParB-like nuclease domain BF28_RS03505 PF17762 HTH domain found in ParB protein BF28_RS03510 PF13614 AAA domain BF28_RS03515 PF02195 ParB-like nuclease domain BF28_RS03515 PF17762 HTH domain found in ParB protein BF28_RS03520 PF06866 Protein of unknown function (DUF1256) BF28_RS03525 PF00924 Mechanosensitive ion channel BF28_RS03530 PF06107 Bacterial protein of unknown function (DUF951) BF28_RS03535 PF06071 Protein of unknown function (DUF933) BF28_RS03535 PF01926 50S ribosome-binding GTPase BF28_RS03540 PF01250 Ribosomal protein S6 BF28_RS03545 PF00436 Single-strand binding protein family BF28_RS03550 PF01084 Ribosomal protein S18 BF28_RS03555 PF09991 Predicted membrane protein (DUF2232) BF28_RS03560 PF01368 DHH family BF28_RS03560 PF02272 DHHA1 domain BF28_RS03565 PF01281 Ribosomal protein L9, N-terminal domain BF28_RS03565 PF03948 Ribosomal protein L9, C-terminal domain BF28_RS03570 PF03796 DnaB-like helicase C terminal domain BF28_RS03570 PF00772 DnaB-like helicase N terminal domain BF28_RS03575 PF00709 Adenylosuccinate synthetase BF28_RS03600 PF00072 Response regulator receiver domain BF28_RS03600 PF00486 Transcriptional regulatory protein, C terminal BF28_RS03605 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS03605 PF00672 HAMP domain BF28_RS03605 PF13426 PAS domain BF28_RS03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS03610 PF07435 YycH protein BF28_RS03615 PF09648 YycH protein BF28_RS03620 PF00753 Metallo-beta-lactamase superfamily BF28_RS03625 PF13180 PDZ domain BF28_RS03635 PF02590 Predicted SPOUT methyltransferase BF28_RS03655 PF01432 Peptidase family M3 BF28_RS03655 PF08439 Oligopeptidase F BF28_RS03660 PF00478 IMP dehydrogenase / GMP reductase domain BF28_RS03670 PF00271 Helicase conserved C-terminal domain BF28_RS03670 PF00270 DEAD/DEAH box helicase BF28_RS03670 PF03880 DbpA RNA binding domain BF28_RS03680 PF03006 Haemolysin-III related BF28_RS03685 PF16363 GDP-mannose 4,6 dehydratase BF28_RS03695 PF02293 AmiS/UreI family transporter BF28_RS03705 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF28_RS03705 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF28_RS03710 PF02898 Nitric oxide synthase, oxygenase domain BF28_RS03715 PF02028 BCCT, betaine/carnitine/choline family transporter BF28_RS03720 PF07690 Major Facilitator Superfamily BF28_RS03725 PF07694 5TMR of 5TMR-LYT BF28_RS03725 PF13492 GAF domain BF28_RS03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS03725 PF06580 Histidine kinase BF28_RS03730 PF00072 Response regulator receiver domain BF28_RS03730 PF04397 LytTr DNA-binding domain BF28_RS03735 PF03788 LrgA family BF28_RS03740 PF04172 LrgB-like family BF28_RS03745 PF01594 AI-2E family transporter BF28_RS03750 PF01641 SelR domain BF28_RS03750 PF01625 Peptide methionine sulfoxide reductase BF28_RS03755 PF00873 AcrB/AcrD/AcrF family BF28_RS03760 PF00440 Bacterial regulatory proteins, tetR family BF28_RS03765 PF00535 Glycosyl transferase family 2 BF28_RS03785 PF00005 ABC transporter BF28_RS03785 PF12848 ABC transporter BF28_RS03790 PF00535 Glycosyl transferase family 2 BF28_RS03800 PF03061 Thioesterase superfamily BF28_RS03810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS03815 PF03458 UPF0126 domain BF28_RS03830 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF28_RS03835 PF07690 Major Facilitator Superfamily BF28_RS03840 PF00072 Response regulator receiver domain BF28_RS03840 PF04397 LytTr DNA-binding domain BF28_RS03845 PF02554 Carbon starvation protein CstA BF28_RS03845 PF13722 5TM C-terminal transporter carbon starvation CstA BF28_RS03850 PF04328 Selenoprotein, putative BF28_RS03855 PF07694 5TMR of 5TMR-LYT BF28_RS03855 PF00990 Diguanylate cyclase, GGDEF domain BF28_RS03860 PF08543 Phosphomethylpyrimidine kinase BF28_RS03865 PF13185 GAF domain BF28_RS03865 PF07730 Histidine kinase BF28_RS03870 PF00196 Bacterial regulatory proteins, luxR family BF28_RS03870 PF00072 Response regulator receiver domain BF28_RS03875 PF02525 Flavodoxin-like fold BF28_RS03880 PF00027 Cyclic nucleotide-binding domain BF28_RS03885 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS03890 PF01053 Cys/Met metabolism PLP-dependent enzyme BF28_RS03895 PF04204 Homoserine O-succinyltransferase BF28_RS03900 PF03447 Homoserine dehydrogenase, NAD binding domain BF28_RS03900 PF01842 ACT domain BF28_RS03900 PF00742 Homoserine dehydrogenase BF28_RS03910 PF00356 Bacterial regulatory proteins, lacI family BF28_RS03910 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF28_RS03915 PF13472 GDSL-like Lipase/Acylhydrolase family BF28_RS03920 PF00005 ABC transporter BF28_RS03925 PF12679 ABC-2 family transporter protein BF28_RS03930 PF03167 Uracil DNA glycosylase superfamily BF28_RS03935 PF12823 Domain of unknown function (DUF3817) BF28_RS03945 PF00860 Permease family BF28_RS03950 PF07885 Ion channel BF28_RS03950 PF02254 TrkA-N domain BF28_RS03960 PF04241 Protein of unknown function (DUF423) BF28_RS03965 PF09671 Spore coat protein (Spore_GerQ) BF28_RS03970 PF07486 Cell Wall Hydrolase BF28_RS03975 PF00768 D-alanyl-D-alanine carboxypeptidase BF28_RS03975 PF07943 Penicillin-binding protein 5, C-terminal domain BF28_RS03980 PF06778 Chlorite dismutase BF28_RS03985 PF01515 Phosphate acetyl/butaryl transferase BF28_RS03990 PF03099 Biotin/lipoate A/B protein ligase family BF28_RS04005 PF07293 Protein of unknown function (DUF1450) BF28_RS04010 PF01032 FecCD transport family BF28_RS04015 PF01032 FecCD transport family BF28_RS04020 PF00005 ABC transporter BF28_RS04025 PF01497 Periplasmic binding protein BF28_RS04030 PF01966 HD domain BF28_RS04035 PF01361 Tautomerase enzyme BF28_RS04040 PF02163 Peptidase family M50 BF28_RS04045 PF08741 YwhD family BF28_RS04050 PF00912 Transglycosylase BF28_RS04050 PF00905 Penicillin binding protein transpeptidase domain BF28_RS04055 PF03009 Glycerophosphoryl diester phosphodiesterase family BF28_RS04060 PF13411 MerR HTH family regulatory protein BF28_RS04065 PF07690 Major Facilitator Superfamily BF28_RS04070 PF17284 Spermidine synthase tetramerisation domain BF28_RS04075 PF00491 Arginase family BF28_RS04095 PF02016 LD-carboxypeptidase N-terminal domain BF28_RS04095 PF17676 LD-carboxypeptidase C-terminal domain BF28_RS04100 PF09148 Domain of unknown function (DUF1934) BF28_RS04105 PF00750 tRNA synthetases class I (R) BF28_RS04105 PF05746 DALR anticodon binding domain BF28_RS04105 PF03485 Arginyl tRNA synthetase N terminal domain BF28_RS04110 PF08281 Sigma-70, region 4 BF28_RS04110 PF04542 Sigma-70 region 2 BF28_RS04130 PF04389 Peptidase family M28 BF28_RS04130 PF02225 PA domain BF28_RS04135 PF02324 Glycosyl hydrolase family 70 BF28_RS04135 PF01473 Putative cell wall binding repeat BF28_RS04140 PF00557 Metallopeptidase family M24 BF28_RS04145 PF00005 ABC transporter BF28_RS04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS04155 PF07730 Histidine kinase BF28_RS04160 PF00072 Response regulator receiver domain BF28_RS04160 PF00196 Bacterial regulatory proteins, luxR family BF28_RS04175 PF03707 Bacterial signalling protein N terminal repeat BF28_RS04175 PF00990 Diguanylate cyclase, GGDEF domain BF28_RS04175 PF00563 EAL domain BF28_RS04180 PF03851 UV-endonuclease UvdE BF28_RS04185 PF13091 PLD-like domain BF28_RS04190 PF13183 4Fe-4S dicluster domain BF28_RS04190 PF02754 Cysteine-rich domain BF28_RS04195 PF00108 Thiolase, N-terminal domain BF28_RS04195 PF02803 Thiolase, C-terminal domain BF28_RS04200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF28_RS04200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF28_RS04205 PF02770 Acyl-CoA dehydrogenase, middle domain BF28_RS04205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF28_RS04205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF28_RS04210 PF02770 Acyl-CoA dehydrogenase, middle domain BF28_RS04210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF28_RS04210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF28_RS04220 PF05066 HB1, ASXL, restriction endonuclease HTH domain BF28_RS04225 PF06418 CTP synthase N-terminus BF28_RS04225 PF00117 Glutamine amidotransferase class-I BF28_RS04230 PF10740 Domain of unknown function (DUF2529) BF28_RS04235 PF00072 Response regulator receiver domain BF28_RS04240 PF01116 Fructose-bisphosphate aldolase class-II BF28_RS04245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF28_RS04250 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF28_RS04255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF28_RS04255 PF07497 Rho termination factor, RNA-binding domain BF28_RS04255 PF07498 Rho termination factor, N-terminal domain BF28_RS04260 PF01197 Ribosomal protein L31 BF28_RS04265 PF00265 Thymidine kinase BF28_RS04270 PF00472 RF-1 domain BF28_RS04270 PF03462 PCRF domain BF28_RS04275 PF17827 PrmC N-terminal domain BF28_RS04275 PF13847 Methyltransferase domain BF28_RS04280 PF09551 Stage II sporulation protein R (spore_II_R) BF28_RS04290 PF03481 Putative GTP-binding controlling metal-binding BF28_RS04290 PF01300 Telomere recombination BF28_RS04295 PF02659 Putative manganese efflux pump BF28_RS04310 PF01613 Flavin reductase like domain BF28_RS04315 PF07681 DoxX BF28_RS04320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF28_RS04325 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF28_RS04330 PF02502 Ribose/Galactose Isomerase BF28_RS04335 PF04260 Protein of unknown function (DUF436) BF28_RS04340 PF00464 Serine hydroxymethyltransferase BF28_RS04360 PF03899 ATP synthase I chain BF28_RS04365 PF00119 ATP synthase A chain BF28_RS04370 PF00137 ATP synthase subunit C BF28_RS04375 PF00430 ATP synthase B/B' CF(0) BF28_RS04380 PF00213 ATP synthase delta (OSCP) subunit BF28_RS04385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF28_RS04385 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF28_RS04385 PF00306 ATP synthase alpha/beta chain, C terminal domain BF28_RS04390 PF00231 ATP synthase BF28_RS04395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF28_RS04395 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF28_RS04400 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BF28_RS04400 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BF28_RS04415 PF00990 Diguanylate cyclase, GGDEF domain BF28_RS04415 PF00563 EAL domain BF28_RS04415 PF03707 Bacterial signalling protein N terminal repeat BF28_RS04420 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BF28_RS04425 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BF28_RS04430 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BF28_RS04435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BF28_RS04440 PF00146 NADH dehydrogenase BF28_RS04450 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BF28_RS04455 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BF28_RS04460 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF28_RS04460 PF00361 Proton-conducting membrane transporter BF28_RS04460 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BF28_RS04465 PF00361 Proton-conducting membrane transporter BF28_RS04470 PF00361 Proton-conducting membrane transporter BF28_RS04475 PF06612 Protein of unknown function (DUF1146) BF28_RS04485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF28_RS04490 PF08486 Stage II sporulation protein BF28_RS04495 PF00072 Response regulator receiver domain BF28_RS04495 PF04397 LytTr DNA-binding domain BF28_RS04500 PF00005 ABC transporter BF28_RS04510 PF01551 Peptidase family M23 BF28_RS04545 PF01522 Polysaccharide deacetylase BF28_RS04550 PF12116 Stage III sporulation protein D BF28_RS04595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF28_RS04595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF28_RS04595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF28_RS04600 PF01061 ABC-2 type transporter BF28_RS04605 PF08239 Bacterial SH3 domain BF28_RS04605 PF00005 ABC transporter BF28_RS04610 PF02350 UDP-N-acetylglucosamine 2-epimerase BF28_RS04615 PF07977 FabA-like domain BF28_RS04625 PF03816 Cell envelope-related transcriptional attenuator domain BF28_RS04630 PF16363 GDP-mannose 4,6 dehydratase BF28_RS04635 PF00072 Response regulator receiver domain BF28_RS04635 PF00486 Transcriptional regulatory protein, C terminal BF28_RS04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS04640 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS04640 PF00989 PAS fold BF28_RS04640 PF16736 Single Cache-like BF28_RS04655 PF07690 Major Facilitator Superfamily BF28_RS04675 PF00005 ABC transporter BF28_RS04680 PF02687 FtsX-like permease family BF28_RS04680 PF12704 MacB-like periplasmic core domain BF28_RS04685 PF04893 Yip1 domain BF28_RS04690 PF04893 Yip1 domain BF28_RS04695 PF04545 Sigma-70, region 4 BF28_RS04695 PF04542 Sigma-70 region 2 BF28_RS04725 PF12419 SNF2 Helicase protein BF28_RS04725 PF00271 Helicase conserved C-terminal domain BF28_RS04725 PF00176 SNF2 family N-terminal domain BF28_RS04730 PF04434 SWIM zinc finger BF28_RS04755 PF06725 3D domain BF28_RS04755 PF01476 LysM domain BF28_RS04760 PF02028 BCCT, betaine/carnitine/choline family transporter BF28_RS04780 PF07662 Na+ dependent nucleoside transporter C-terminus BF28_RS04780 PF01773 Na+ dependent nucleoside transporter N-terminus BF28_RS04785 PF00877 NlpC/P60 family BF28_RS04785 PF01476 LysM domain BF28_RS04790 PF01063 Amino-transferase class IV BF28_RS04795 PF00884 Sulfatase BF28_RS04805 PF09988 Uncharacterized metal-binding protein (DUF2227) BF28_RS04815 PF02652 L-lactate permease BF28_RS04835 PF01964 Radical SAM ThiC family BF28_RS04835 PF13667 ThiC-associated domain BF28_RS04840 PF02040 Arsenical pump membrane protein BF28_RS04845 PF02322 Cytochrome bd terminal oxidase subunit II BF28_RS04850 PF01654 Cytochrome bd terminal oxidase subunit I BF28_RS04865 PF03466 LysR substrate binding domain BF28_RS04865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS04875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS04885 PF00375 Sodium:dicarboxylate symporter family BF28_RS04890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF28_RS04895 PF02378 Phosphotransferase system, EIIC BF28_RS04900 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF28_RS04905 PF02675 S-adenosylmethionine decarboxylase BF28_RS04915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF28_RS04920 PF02378 Phosphotransferase system, EIIC BF28_RS04925 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF28_RS04930 PF11975 Family 4 glycosyl hydrolase C-terminal domain BF28_RS04930 PF02056 Family 4 glycosyl hydrolase BF28_RS04935 PF04794 YdjC-like protein BF28_RS04940 PF02417 Chromate transporter BF28_RS04950 PF03610 PTS system fructose IIA component BF28_RS04950 PF00874 PRD domain BF28_RS04950 PF00158 Sigma-54 interaction domain BF28_RS04955 PF01522 Polysaccharide deacetylase BF28_RS04960 PF00953 Glycosyl transferase family 4 BF28_RS04965 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF28_RS04965 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF28_RS04965 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF28_RS04970 PF02350 UDP-N-acetylglucosamine 2-epimerase BF28_RS04975 PF03816 Cell envelope-related transcriptional attenuator domain BF28_RS04980 PF09186 Domain of unknown function (DUF1949) BF28_RS04980 PF01205 Uncharacterized protein family UPF0029 BF28_RS04985 PF02645 Uncharacterised protein, DegV family COG1307 BF28_RS04995 PF01638 HxlR-like helix-turn-helix BF28_RS05000 PF00877 NlpC/P60 family BF28_RS05000 PF01476 LysM domain BF28_RS05005 PF04851 Type III restriction enzyme, res subunit BF28_RS05005 PF00271 Helicase conserved C-terminal domain BF28_RS05015 PF00313 'Cold-shock' DNA-binding domain BF28_RS05020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BF28_RS05020 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BF28_RS05025 PF07516 SecA Wing and Scaffold domain BF28_RS05025 PF02810 SEC-C motif BF28_RS05025 PF01043 SecA preprotein cross-linking domain BF28_RS05025 PF07517 SecA DEAD-like domain BF28_RS05030 PF00472 RF-1 domain BF28_RS05030 PF03462 PCRF domain BF28_RS05040 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF28_RS05045 PF00005 ABC transporter BF28_RS05050 PF02687 FtsX-like permease family BF28_RS05050 PF18075 FtsX extracellular domain BF28_RS05055 PF17820 PDZ domain BF28_RS05055 PF03572 Peptidase family S41 BF28_RS05055 PF01471 Putative peptidoglycan binding domain BF28_RS05060 PF17820 PDZ domain BF28_RS05065 PF00005 ABC transporter BF28_RS05065 PF00664 ABC transporter transmembrane region BF28_RS05070 PF01906 Putative heavy-metal-binding BF28_RS05075 PF00005 ABC transporter BF28_RS05075 PF12848 ABC transporter BF28_RS05080 PF03358 NADPH-dependent FMN reductase BF28_RS05085 PF00376 MerR family regulatory protein BF28_RS05085 PF09278 MerR, DNA binding BF28_RS05090 PF03466 LysR substrate binding domain BF28_RS05090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS05095 PF03601 Conserved hypothetical protein 698 BF28_RS05125 PF13411 MerR HTH family regulatory protein BF28_RS05125 PF07739 TipAS antibiotic-recognition domain BF28_RS05135 PF04851 Type III restriction enzyme, res subunit BF28_RS05135 PF02151 UvrB/uvrC motif BF28_RS05135 PF12344 Ultra-violet resistance protein B BF28_RS05135 PF17757 UvrB interaction domain BF28_RS05135 PF00271 Helicase conserved C-terminal domain BF28_RS05140 PF00005 ABC transporter BF28_RS05140 PF17760 UvrA interaction domain BF28_RS05140 PF17755 UvrA DNA-binding domain BF28_RS05150 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BF28_RS05155 PF02603 HPr Serine kinase N terminus BF28_RS05155 PF07475 HPr Serine kinase C-terminal domain BF28_RS05160 PF01790 Prolipoprotein diacylglyceryl transferase BF28_RS05165 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS05170 PF14602 Hexapeptide repeat of succinyl-transferase BF28_RS05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS05190 PF00293 NUDIX domain BF28_RS05195 PF03668 P-loop ATPase protein family BF28_RS05200 PF01933 Uncharacterised protein family UPF0052 BF28_RS05205 PF10298 WhiA N-terminal LAGLIDADG-like domain BF28_RS05205 PF14527 WhiA LAGLIDADG-like domain BF28_RS05205 PF02650 WhiA C-terminal HTH domain BF28_RS05210 PF00381 PTS HPr component phosphorylation site BF28_RS05215 PF00574 Clp protease BF28_RS05220 PF04239 Protein of unknown function (DUF421) BF28_RS05230 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF28_RS05235 PF07451 Stage V sporulation protein AD (SpoVAD) BF28_RS05240 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF28_RS05265 PF17874 MalT-like TPR region BF28_RS05265 PF18801 response regulator aspartate phosphatase H, N terminal BF28_RS05285 PF04552 Sigma-54, DNA binding domain BF28_RS05285 PF00309 Sigma-54 factor, Activator interacting domain (AID) BF28_RS05285 PF04963 Sigma-54 factor, core binding domain BF28_RS05295 PF04198 Putative sugar-binding domain BF28_RS05300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF28_RS05300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF28_RS05305 PF00162 Phosphoglycerate kinase BF28_RS05310 PF00121 Triosephosphate isomerase BF28_RS05315 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BF28_RS05315 PF01676 Metalloenzyme superfamily BF28_RS05320 PF00113 Enolase, C-terminal TIM barrel domain BF28_RS05320 PF03952 Enolase, N-terminal domain BF28_RS05325 PF01156 Inosine-uridine preferring nucleoside hydrolase BF28_RS05330 PF03788 LrgA family BF28_RS05335 PF04172 LrgB-like family BF28_RS05340 PF03840 Preprotein translocase SecG subunit BF28_RS05345 PF12146 Serine aminopeptidase, S33 BF28_RS05350 PF00773 RNB domain BF28_RS05350 PF17876 Cold shock domain BF28_RS05350 PF08206 Ribonuclease B OB domain BF28_RS05350 PF00575 S1 RNA binding domain BF28_RS05355 PF01668 SmpB protein BF28_RS05360 PF00486 Transcriptional regulatory protein, C terminal BF28_RS05360 PF00072 Response regulator receiver domain BF28_RS05370 PF01032 FecCD transport family BF28_RS05375 PF01032 FecCD transport family BF28_RS05380 PF00005 ABC transporter BF28_RS05390 PF01047 MarR family BF28_RS05405 PF06146 Phosphate-starvation-inducible E BF28_RS05410 PF13302 Acetyltransferase (GNAT) domain BF28_RS05425 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF28_RS05430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF28_RS05440 PF00672 HAMP domain BF28_RS05440 PF17202 Single cache domain 3 BF28_RS05440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS05450 PF01565 FAD binding domain BF28_RS05450 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF28_RS05455 PF00579 tRNA synthetases class I (W and Y) BF28_RS05455 PF01479 S4 domain BF28_RS05460 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS05465 PF07849 Protein of unknown function (DUF1641) BF28_RS05470 PF01638 HxlR-like helix-turn-helix BF28_RS05475 PF07690 Major Facilitator Superfamily BF28_RS05480 PF00248 Aldo/keto reductase family BF28_RS05495 PF13460 NAD(P)H-binding BF28_RS05500 PF01235 Sodium:alanine symporter family BF28_RS05505 PF01235 Sodium:alanine symporter family BF28_RS05510 PF07662 Na+ dependent nucleoside transporter C-terminus BF28_RS05510 PF01773 Na+ dependent nucleoside transporter N-terminus BF28_RS05515 PF01773 Na+ dependent nucleoside transporter N-terminus BF28_RS05515 PF07662 Na+ dependent nucleoside transporter C-terminus BF28_RS05525 PF00210 Ferritin-like domain BF28_RS05535 PF03641 Possible lysine decarboxylase BF28_RS05550 PF00210 Ferritin-like domain BF28_RS05555 PF01235 Sodium:alanine symporter family BF28_RS05565 PF02080 TrkA-C domain BF28_RS05570 PF00999 Sodium/hydrogen exchanger family BF28_RS05585 PF02678 Pirin BF28_RS05585 PF17954 Quercetinase C-terminal cupin domain BF28_RS05590 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF28_RS05590 PF03413 Peptidase propeptide and YPEB domain BF28_RS05590 PF01447 Thermolysin metallopeptidase, catalytic domain BF28_RS05590 PF07504 Fungalysin/Thermolysin Propeptide Motif BF28_RS05595 PF01883 Iron-sulfur cluster assembly protein BF28_RS05600 PF00672 HAMP domain BF28_RS05600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS05600 PF02743 Cache domain BF28_RS05605 PF02743 Cache domain BF28_RS05605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS05605 PF00672 HAMP domain BF28_RS05625 PF16736 Single Cache-like BF28_RS05625 PF00989 PAS fold BF28_RS05625 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS05625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS05630 PF00486 Transcriptional regulatory protein, C terminal BF28_RS05630 PF00072 Response regulator receiver domain BF28_RS05635 PF17969 L,D-transpeptidase C-terminal domain BF28_RS05635 PF03734 L,D-transpeptidase catalytic domain BF28_RS05645 PF09335 SNARE associated Golgi protein BF28_RS05675 PF00005 ABC transporter BF28_RS05685 PF12679 ABC-2 family transporter protein BF28_RS05690 PF00486 Transcriptional regulatory protein, C terminal BF28_RS05690 PF00072 Response regulator receiver domain BF28_RS05695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS05695 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS05695 PF00672 HAMP domain BF28_RS05695 PF13426 PAS domain BF28_RS05710 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF28_RS05710 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS05720 PF02096 60Kd inner membrane protein BF28_RS05735 PF13520 Amino acid permease BF28_RS05740 PF07690 Major Facilitator Superfamily BF28_RS05760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS05760 PF02743 Cache domain BF28_RS05760 PF00672 HAMP domain BF28_RS05765 PF01910 Thiamine-binding protein BF28_RS05770 PF10835 Protein of unknown function (DUF2573) BF28_RS05775 PF01619 Proline dehydrogenase BF28_RS05780 PF07943 Penicillin-binding protein 5, C-terminal domain BF28_RS05780 PF00768 D-alanyl-D-alanine carboxypeptidase BF28_RS05785 PF14115 YuzL-like protein BF28_RS05790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF28_RS05790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF28_RS05790 PF00378 Enoyl-CoA hydratase/isomerase BF28_RS05795 PF02803 Thiolase, C-terminal domain BF28_RS05795 PF00108 Thiolase, N-terminal domain BF28_RS05800 PF02770 Acyl-CoA dehydrogenase, middle domain BF28_RS05800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF28_RS05800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF28_RS05805 PF00753 Metallo-beta-lactamase superfamily BF28_RS05810 PF13305 Tetracyclin repressor-like, C-terminal domain BF28_RS05810 PF00440 Bacterial regulatory proteins, tetR family BF28_RS05815 PF01381 Helix-turn-helix BF28_RS05815 PF08671 Anti-repressor SinI BF28_RS05840 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF28_RS05840 PF00056 lactate/malate dehydrogenase, NAD binding domain BF28_RS05870 PF03960 ArsC family BF28_RS05875 PF01597 Glycine cleavage H-protein BF28_RS05880 PF01751 Toprim domain BF28_RS05885 PF00085 Thioredoxin BF28_RS05900 PF00005 ABC transporter BF28_RS05900 PF09383 NIL domain BF28_RS05905 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS05910 PF03180 NLPA lipoprotein BF28_RS05915 PF03180 NLPA lipoprotein BF28_RS05920 PF00005 ABC transporter BF28_RS05925 PF01458 Uncharacterized protein family (UPF0051) BF28_RS05930 PF00266 Aminotransferase class-V BF28_RS05935 PF01592 NifU-like N terminal domain BF28_RS05940 PF01458 Uncharacterized protein family (UPF0051) BF28_RS05945 PF02872 5'-nucleotidase, C-terminal domain BF28_RS05950 PF08827 Domain of unknown function (DUF1805) BF28_RS05960 PF01551 Peptidase family M23 BF28_RS05965 PF04055 Radical SAM superfamily BF28_RS05965 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BF28_RS05985 PF10086 YhfC intramembrane metalloprotease BF28_RS05990 PF13411 MerR HTH family regulatory protein BF28_RS05990 PF07739 TipAS antibiotic-recognition domain BF28_RS05995 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BF28_RS06000 PF06265 Protein of unknown function (DUF1027) BF28_RS06020 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF28_RS06025 PF01934 Protein of unknown function DUF86 BF28_RS06035 PF13344 Haloacid dehalogenase-like hydrolase BF28_RS06045 PF02525 Flavodoxin-like fold BF28_RS06060 PF04608 Phosphatidylglycerophosphatase A BF28_RS06075 PF01106 NifU-like domain BF28_RS06080 PF07315 Protein of unknown function (DUF1462) BF28_RS06085 PF13427 Domain of unknown function (DUF4111) BF28_RS06085 PF01909 Nucleotidyltransferase domain BF28_RS06095 PF08274 PhnA Zinc-Ribbon BF28_RS06095 PF03831 PhnA domain BF28_RS06100 PF03649 Uncharacterised protein family (UPF0014) BF28_RS06105 PF00664 ABC transporter transmembrane region BF28_RS06105 PF00005 ABC transporter BF28_RS06105 PF03412 Peptidase C39 family BF28_RS06115 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS06120 PF07293 Protein of unknown function (DUF1450) BF28_RS06125 PF01678 Diaminopimelate epimerase BF28_RS06130 PF01521 Iron-sulphur cluster biosynthesis BF28_RS06150 PF04463 Protein of unknown function (DUF523) BF28_RS06165 PF06445 GyrI-like small molecule binding domain BF28_RS06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS06180 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS06185 PF13344 Haloacid dehalogenase-like hydrolase BF28_RS06185 PF00293 NUDIX domain BF28_RS06195 PF06725 3D domain BF28_RS06200 PF02789 Cytosol aminopeptidase family, N-terminal domain BF28_RS06200 PF00883 Cytosol aminopeptidase family, catalytic domain BF28_RS06205 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF28_RS06205 PF10372 Bacterial membrane-spanning protein N-terminus BF28_RS06210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF28_RS06210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF28_RS06210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF28_RS06210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF28_RS06215 PF00483 Nucleotidyl transferase BF28_RS06220 PF02632 BioY family BF28_RS06230 PF03061 Thioesterase superfamily BF28_RS06235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF28_RS06235 PF03129 Anticodon binding domain BF28_RS06250 PF03600 Citrate transporter BF28_RS06255 PF00929 Exonuclease BF28_RS06260 PF08810 Kinase associated protein B BF28_RS06275 PF00155 Aminotransferase class I and II BF28_RS06285 PF00561 alpha/beta hydrolase fold BF28_RS06285 PF08386 TAP-like protein BF28_RS06290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF28_RS06290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF28_RS06295 PF01037 Lrp/AsnC ligand binding domain BF28_RS06300 PF00155 Aminotransferase class I and II BF28_RS06305 PF00575 S1 RNA binding domain BF28_RS06310 PF04070 Domain of unknown function (DUF378) BF28_RS06320 PF00342 Phosphoglucose isomerase BF28_RS06325 PF08868 YugN-like family BF28_RS06330 PF07885 Ion channel BF28_RS06330 PF02254 TrkA-N domain BF28_RS06335 PF02308 MgtC family BF28_RS06370 PF05697 Bacterial trigger factor protein (TF) BF28_RS06370 PF05698 Bacterial trigger factor protein (TF) C-terminus BF28_RS06465 PF00056 lactate/malate dehydrogenase, NAD binding domain BF28_RS06465 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF28_RS06480 PF00128 Alpha amylase, catalytic domain BF28_RS06480 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF28_RS06480 PF02806 Alpha amylase, C-terminal all-beta domain BF28_RS06485 PF00483 Nucleotidyl transferase BF28_RS06490 PF00483 Nucleotidyl transferase BF28_RS06495 PF00534 Glycosyl transferases group 1 BF28_RS06495 PF08323 Starch synthase catalytic domain BF28_RS06500 PF00343 Carbohydrate phosphorylase BF28_RS06520 PF00313 'Cold-shock' DNA-binding domain BF28_RS06525 PF01258 Prokaryotic dksA/traR C4-type zinc finger BF28_RS06530 PF01040 UbiA prenyltransferase family BF28_RS06535 PF00425 chorismate binding enzyme BF28_RS06540 PF16582 Middle domain of thiamine pyrophosphate BF28_RS06540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF28_RS06540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF28_RS06545 PF00561 alpha/beta hydrolase fold BF28_RS06550 PF00378 Enoyl-CoA hydratase/isomerase BF28_RS06555 PF00501 AMP-binding enzyme BF28_RS06555 PF13193 AMP-binding enzyme C-terminal domain BF28_RS06560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF28_RS06560 PF13378 Enolase C-terminal domain-like BF28_RS06565 PF00486 Transcriptional regulatory protein, C terminal BF28_RS06565 PF00072 Response regulator receiver domain BF28_RS06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS06570 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS06575 PF02557 D-alanyl-D-alanine carboxypeptidase BF28_RS06580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF28_RS06585 PF00860 Permease family BF28_RS06590 PF03466 LysR substrate binding domain BF28_RS06590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS06595 PF01979 Amidohydrolase family BF28_RS06600 PF03841 L-seryl-tRNA selenium transferase BF28_RS06605 PF07071 KDGP aldolase BF28_RS06615 PF07702 UTRA domain BF28_RS06615 PF00392 Bacterial regulatory proteins, gntR family BF28_RS06620 PF02447 GntP family permease BF28_RS06630 PF02687 FtsX-like permease family BF28_RS06635 PF00005 ABC transporter BF28_RS06640 PF02687 FtsX-like permease family BF28_RS06645 PF02687 FtsX-like permease family BF28_RS06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS06655 PF00072 Response regulator receiver domain BF28_RS06655 PF00486 Transcriptional regulatory protein, C terminal BF28_RS06660 PF01022 Bacterial regulatory protein, arsR family BF28_RS06665 PF07853 Protein of unknown function (DUF1648) BF28_RS06665 PF13630 SdpI/YhfL protein family BF28_RS06670 PF00005 ABC transporter BF28_RS06680 PF06445 GyrI-like small molecule binding domain BF28_RS06680 PF12833 Helix-turn-helix domain BF28_RS06685 PF00005 ABC transporter BF28_RS06690 PF02687 FtsX-like permease family BF28_RS06700 PF02311 AraC-like ligand binding domain BF28_RS06700 PF12833 Helix-turn-helix domain BF28_RS06705 PF00398 Ribosomal RNA adenine dimethylase BF28_RS06710 PF09335 SNARE associated Golgi protein BF28_RS06735 PF00781 Diacylglycerol kinase catalytic domain BF28_RS06740 PF00156 Phosphoribosyl transferase domain BF28_RS06765 PF00072 Response regulator receiver domain BF28_RS06765 PF00486 Transcriptional regulatory protein, C terminal BF28_RS06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS06770 PF00672 HAMP domain BF28_RS06770 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS06775 PF09515 Thiamine transporter protein (Thia_YuaJ) BF28_RS06785 PF07664 Ferrous iron transport protein B C terminus BF28_RS06785 PF17910 FeoB cytosolic helical domain BF28_RS06785 PF02421 Ferrous iron transport protein B BF28_RS06785 PF07670 Nucleoside recognition BF28_RS06800 PF04012 PspA/IM30 family BF28_RS06825 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS06825 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF28_RS06840 PF10676 Spore germination protein gerPA/gerPF BF28_RS06845 PF02322 Cytochrome bd terminal oxidase subunit II BF28_RS06850 PF01654 Cytochrome bd terminal oxidase subunit I BF28_RS06855 PF00484 Carbonic anhydrase BF28_RS06860 PF01809 Putative membrane protein insertion efficiency factor BF28_RS06865 PF02664 S-Ribosylhomocysteinase (LuxS) BF28_RS06885 PF00293 NUDIX domain BF28_RS06895 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS06910 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS06915 PF00005 ABC transporter BF28_RS06935 PF00884 Sulfatase BF28_RS06940 PF08386 TAP-like protein BF28_RS06940 PF00561 alpha/beta hydrolase fold BF28_RS06945 PF08447 PAS fold BF28_RS06945 PF00989 PAS fold BF28_RS06945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS06945 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS06950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS06950 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS06950 PF00989 PAS fold BF28_RS06950 PF13188 PAS domain BF28_RS06950 PF13426 PAS domain BF28_RS06955 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS06960 PF00455 DeoR C terminal sensor domain BF28_RS06960 PF08220 DeoR-like helix-turn-helix domain BF28_RS06965 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS06970 PF01784 NIF3 (NGG1p interacting factor 3) BF28_RS07005 PF01293 Phosphoenolpyruvate carboxykinase BF28_RS07010 PF00438 S-adenosylmethionine synthetase, N-terminal domain BF28_RS07010 PF02772 S-adenosylmethionine synthetase, central domain BF28_RS07010 PF02773 S-adenosylmethionine synthetase, C-terminal domain BF28_RS07015 PF13302 Acetyltransferase (GNAT) domain BF28_RS07030 PF00994 Probable molybdopterin binding domain BF28_RS07035 PF12804 MobA-like NTP transferase domain BF28_RS07040 PF00534 Glycosyl transferases group 1 BF28_RS07040 PF13439 Glycosyltransferase Family 4 BF28_RS07045 PF01569 PAP2 superfamily BF28_RS07050 PF00132 Bacterial transferase hexapeptide (six repeats) BF28_RS07055 PF12146 Serine aminopeptidase, S33 BF28_RS07060 PF10776 Protein of unknown function (DUF2600) BF28_RS07080 PF10026 Predicted Zn-dependent protease (DUF2268) BF28_RS07090 PF01177 Asp/Glu/Hydantoin racemase BF28_RS07100 PF00005 ABC transporter BF28_RS07100 PF13732 Domain of unknown function (DUF4162) BF28_RS07105 PF06962 Putative rRNA methylase BF28_RS07110 PF16199 Radical_SAM C-terminal domain BF28_RS07110 PF04055 Radical SAM superfamily BF28_RS07115 PF10732 Protein of unknown function (DUF2524) BF28_RS07125 PF04235 Protein of unknown function (DUF418) BF28_RS07125 PF07786 Protein of unknown function (DUF1624) BF28_RS07130 PF00005 ABC transporter BF28_RS07145 PF00589 Phage integrase family BF28_RS07150 PF02080 TrkA-C domain BF28_RS07155 PF00999 Sodium/hydrogen exchanger family BF28_RS07160 PF07690 Major Facilitator Superfamily BF28_RS07165 PF09334 tRNA synthetases class I (M) BF28_RS07165 PF00133 tRNA synthetases class I (I, L, M and V) BF28_RS07165 PF08264 Anticodon-binding domain of tRNA BF28_RS07165 PF13603 Leucyl-tRNA synthetase, Domain 2 BF28_RS07195 PF03845 Spore germination protein BF28_RS07200 PF03323 Bacillus/Clostridium GerA spore germination protein BF28_RS07205 PF00561 alpha/beta hydrolase fold BF28_RS07215 PF00581 Rhodanese-like domain BF28_RS07235 PF06463 Molybdenum Cofactor Synthesis C BF28_RS07235 PF04055 Radical SAM superfamily BF28_RS07240 PF00899 ThiF family BF28_RS07245 PF01967 MoaC family BF28_RS07250 PF03453 MoeA N-terminal region (domain I and II) BF28_RS07250 PF03454 MoeA C-terminal region (domain IV) BF28_RS07250 PF00994 Probable molybdopterin binding domain BF28_RS07255 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BF28_RS07260 PF02391 MoaE protein BF28_RS07275 PF06800 Sugar transport protein BF28_RS07285 PF02559 CarD-like/TRCF domain BF28_RS07295 PF10957 Sporulation protein Cse60 BF28_RS07305 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BF28_RS07310 PF01022 Bacterial regulatory protein, arsR family BF28_RS07315 PF07690 Major Facilitator Superfamily BF28_RS07325 PF01943 Polysaccharide biosynthesis protein BF28_RS07325 PF14667 Polysaccharide biosynthesis C-terminal domain BF28_RS07330 PF01479 S4 domain BF28_RS07330 PF00849 RNA pseudouridylate synthase BF28_RS07335 PF08220 DeoR-like helix-turn-helix domain BF28_RS07340 PF01546 Peptidase family M20/M25/M40 BF28_RS07345 PF02834 LigT like Phosphoesterase BF28_RS07355 PF17999 Pullulanase N1-terminal domain BF28_RS07355 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF28_RS07355 PF00128 Alpha amylase, catalytic domain BF28_RS07360 PF01636 Phosphotransferase enzyme family BF28_RS07365 PF14165 YtzH-like protein BF28_RS07370 PF02390 Putative methyltransferase BF28_RS07375 PF00753 Metallo-beta-lactamase superfamily BF28_RS07385 PF05343 M42 glutamyl aminopeptidase BF28_RS07390 PF01931 Protein of unknown function DUF84 BF28_RS07395 PF00085 Thioredoxin BF28_RS07400 PF07285 Protein of unknown function (DUF1444) BF28_RS07405 PF01588 Putative tRNA binding domain BF28_RS07405 PF14794 Domain of unknown function (DUF4479) BF28_RS07415 PF01580 FtsK/SpoIIIE family BF28_RS07415 PF09397 Ftsk gamma domain BF28_RS07415 PF17854 FtsK alpha domain BF28_RS07425 PF01225 Mur ligase family, catalytic domain BF28_RS07425 PF02875 Mur ligase family, glutamate ligase domain BF28_RS07425 PF08245 Mur ligase middle domain BF28_RS07435 PF03551 Transcriptional regulator PadR-like family BF28_RS07440 PF13302 Acetyltransferase (GNAT) domain BF28_RS07460 PF02073 Thermophilic metalloprotease (M29) BF28_RS07470 PF11009 Protein of unknown function (DUF2847) BF28_RS07475 PF07537 CamS sex pheromone cAM373 precursor BF28_RS07490 PF00356 Bacterial regulatory proteins, lacI family BF28_RS07515 PF01741 Large-conductance mechanosensitive channel, MscL BF28_RS07520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF28_RS07525 PF12796 Ankyrin repeats (3 copies) BF28_RS07530 PF00672 HAMP domain BF28_RS07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS07530 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS07530 PF13426 PAS domain BF28_RS07535 PF00486 Transcriptional regulatory protein, C terminal BF28_RS07535 PF00072 Response regulator receiver domain BF28_RS07545 PF00561 alpha/beta hydrolase fold BF28_RS07550 PF00850 Histone deacetylase domain BF28_RS07555 PF00571 CBS domain BF28_RS07560 PF00583 Acetyltransferase (GNAT) family BF28_RS07565 PF00501 AMP-binding enzyme BF28_RS07565 PF13193 AMP-binding enzyme C-terminal domain BF28_RS07575 PF04542 Sigma-70 region 2 BF28_RS07575 PF08281 Sigma-70, region 4 BF28_RS07585 PF00579 tRNA synthetases class I (W and Y) BF28_RS07585 PF01479 S4 domain BF28_RS07635 PF00163 Ribosomal protein S4/S9 N-terminal domain BF28_RS07635 PF01479 S4 domain BF28_RS07640 PF01053 Cys/Met metabolism PLP-dependent enzyme BF28_RS07645 PF13185 GAF domain BF28_RS07650 PF00440 Bacterial regulatory proteins, tetR family BF28_RS07655 PF00892 EamA-like transporter family BF28_RS07660 PF03466 LysR substrate binding domain BF28_RS07660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS07665 PF06160 Septation ring formation regulator, EzrA BF28_RS07670 PF00266 Aminotransferase class-V BF28_RS07675 PF02568 Thiamine biosynthesis protein (ThiI) BF28_RS07675 PF02926 THUMP domain BF28_RS07680 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF28_RS07685 PF13193 AMP-binding enzyme C-terminal domain BF28_RS07685 PF00501 AMP-binding enzyme BF28_RS07695 PF07969 Amidohydrolase family BF28_RS07700 PF01513 ATP-NAD kinase BF28_RS07710 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF28_RS07715 PF08534 Redoxin BF28_RS07720 PF02384 N-6 DNA Methylase BF28_RS07725 PF00871 Acetokinase family BF28_RS07735 PF12787 EcsC protein family BF28_RS07740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF28_RS07740 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS07755 PF00764 Arginosuccinate synthase BF28_RS07760 PF14698 Argininosuccinate lyase C-terminal BF28_RS07760 PF00206 Lyase BF28_RS07780 PF00582 Universal stress protein family BF28_RS07790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF28_RS07790 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF28_RS07800 PF01381 Helix-turn-helix BF28_RS07810 PF07883 Cupin domain BF28_RS07850 PF01321 Creatinase/Prolidase N-terminal domain BF28_RS07850 PF00557 Metallopeptidase family M24 BF28_RS07865 PF03061 Thioesterase superfamily BF28_RS07865 PF00392 Bacterial regulatory proteins, gntR family BF28_RS07865 PF07085 DRTGG domain BF28_RS07865 PF00571 CBS domain BF28_RS07875 PF01636 Phosphotransferase enzyme family BF28_RS07885 PF14007 YtpI-like protein BF28_RS07890 PF02272 DHHA1 domain BF28_RS07890 PF01368 DHH family BF28_RS07900 PF14034 Sporulation protein YtrH BF28_RS07905 PF14579 Helix-hairpin-helix motif BF28_RS07905 PF02811 PHP domain BF28_RS07905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF28_RS07905 PF01336 OB-fold nucleic acid binding domain BF28_RS07905 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF28_RS07910 PF03949 Malic enzyme, NAD binding domain BF28_RS07910 PF00390 Malic enzyme, N-terminal domain BF28_RS07915 PF00392 Bacterial regulatory proteins, gntR family BF28_RS07920 PF01039 Carboxyl transferase domain BF28_RS07920 PF17848 Acetyl-coA carboxylase zinc finger domain BF28_RS07925 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BF28_RS07930 PF00365 Phosphofructokinase BF28_RS07935 PF00224 Pyruvate kinase, barrel domain BF28_RS07935 PF02887 Pyruvate kinase, alpha/beta domain BF28_RS07935 PF00391 PEP-utilising enzyme, mobile domain BF28_RS07940 PF04186 FxsA cytoplasmic membrane protein BF28_RS07945 PF01594 AI-2E family transporter BF28_RS07950 PF04284 Protein of unknown function (DUF441) BF28_RS07960 PF00285 Citrate synthase, C-terminal domain BF28_RS07965 PF00180 Isocitrate/isopropylmalate dehydrogenase BF28_RS07970 PF00056 lactate/malate dehydrogenase, NAD binding domain BF28_RS07970 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF28_RS07985 PF00072 Response regulator receiver domain BF28_RS07985 PF00486 Transcriptional regulatory protein, C terminal BF28_RS07990 PF16736 Single Cache-like BF28_RS07990 PF00989 PAS fold BF28_RS07990 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS07995 PF01367 5'-3' exonuclease, C-terminal SAM fold BF28_RS07995 PF00476 DNA polymerase family A BF28_RS07995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF28_RS08000 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BF28_RS08000 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BF28_RS08000 PF06827 Zinc finger found in FPG and IleRS BF28_RS08005 PF02659 Putative manganese efflux pump BF28_RS08010 PF01121 Dephospho-CoA kinase BF28_RS08015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF28_RS08015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF28_RS08025 PF02675 S-adenosylmethionine decarboxylase BF28_RS08030 PF03477 ATP cone domain BF28_RS08035 PF07261 Replication initiation and membrane attachment BF28_RS08040 PF01695 IstB-like ATP binding protein BF28_RS08040 PF07319 Primosomal protein DnaI N-terminus BF28_RS08045 PF08812 YtxC-like family BF28_RS08050 PF02824 TGS domain BF28_RS08050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF28_RS08050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF28_RS08050 PF03129 Anticodon binding domain BF28_RS08055 PF00707 Translation initiation factor IF-3, C-terminal domain BF28_RS08055 PF05198 Translation initiation factor IF-3, N-terminal domain BF28_RS08060 PF01632 Ribosomal protein L35 BF28_RS08065 PF00453 Ribosomal protein L20 BF28_RS08075 PF05343 M42 glutamyl aminopeptidase BF28_RS08080 PF16859 Tetracyclin repressor-like, C-terminal domain BF28_RS08080 PF00440 Bacterial regulatory proteins, tetR family BF28_RS08090 PF07690 Major Facilitator Superfamily BF28_RS08105 PF01966 HD domain BF28_RS08110 PF14098 Small, acid-soluble spore protein I BF28_RS08115 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF28_RS08115 PF00588 SpoU rRNA Methylase family BF28_RS08120 PF01409 tRNA synthetases class II core domain (F) BF28_RS08120 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BF28_RS08125 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BF28_RS08125 PF01588 Putative tRNA binding domain BF28_RS08125 PF03484 tRNA synthetase B5 domain BF28_RS08125 PF03147 Ferredoxin-fold anticodon binding domain BF28_RS08125 PF03483 B3/4 domain BF28_RS08130 PF00152 tRNA synthetases class II (D, K and N) BF28_RS08130 PF01336 OB-fold nucleic acid binding domain BF28_RS08150 PF11858 Domain of unknown function (DUF3378) BF28_RS08150 PF01351 Ribonuclease HII BF28_RS08155 PF05164 Cell division protein ZapA BF28_RS08160 PF02674 Colicin V production protein BF28_RS08165 PF02811 PHP domain BF28_RS08165 PF14791 DNA polymerase beta thumb BF28_RS08165 PF14716 Helix-hairpin-helix domain BF28_RS08170 PF00488 MutS domain V BF28_RS08170 PF01713 Smr domain BF28_RS08180 PF00849 RNA pseudouridylate synthase BF28_RS08180 PF01479 S4 domain BF28_RS08185 PF05525 Branched-chain amino acid transport protein BF28_RS08190 PF05031 Iron Transport-associated domain BF28_RS08195 PF05031 Iron Transport-associated domain BF28_RS08200 PF01497 Periplasmic binding protein BF28_RS08205 PF01032 FecCD transport family BF28_RS08210 PF00005 ABC transporter BF28_RS08215 PF04203 Sortase domain BF28_RS08220 PF03992 Antibiotic biosynthesis monooxygenase BF28_RS08230 PF17785 PUA-like domain BF28_RS08230 PF10672 S-adenosylmethionine-dependent methyltransferase BF28_RS08235 PF09962 Uncharacterized conserved protein (DUF2196) BF28_RS08245 PF00072 Response regulator receiver domain BF28_RS08245 PF00486 Transcriptional regulatory protein, C terminal BF28_RS08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS08250 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS08255 PF00005 ABC transporter BF28_RS08280 PF05163 DinB family BF28_RS08295 PF13193 AMP-binding enzyme C-terminal domain BF28_RS08295 PF00501 AMP-binding enzyme BF28_RS08300 PF00440 Bacterial regulatory proteins, tetR family BF28_RS08300 PF08359 YsiA-like protein, C-terminal region BF28_RS08305 PF00378 Enoyl-CoA hydratase/isomerase BF28_RS08310 PF01012 Electron transfer flavoprotein domain BF28_RS08315 PF01012 Electron transfer flavoprotein domain BF28_RS08315 PF00766 Electron transfer flavoprotein FAD-binding domain BF28_RS08320 PF00085 Thioredoxin BF28_RS08325 PF01541 GIY-YIG catalytic domain BF28_RS08325 PF02151 UvrB/uvrC motif BF28_RS08325 PF08459 UvrC Helix-hairpin-helix N-terminal BF28_RS08330 PF10702 Protein of unknown function (DUF2507) BF28_RS08335 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BF28_RS08340 PF02910 Fumarate reductase flavoprotein C-term BF28_RS08340 PF00890 FAD binding domain BF28_RS08345 PF13085 2Fe-2S iron-sulfur cluster binding domain BF28_RS08345 PF13183 4Fe-4S dicluster domain BF28_RS08350 PF03061 Thioesterase superfamily BF28_RS08355 PF02557 D-alanyl-D-alanine carboxypeptidase BF28_RS08360 PF01618 MotA/TolQ/ExbB proton channel family BF28_RS08365 PF00691 OmpA family BF28_RS08365 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF28_RS08370 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BF28_RS08375 PF13732 Domain of unknown function (DUF4162) BF28_RS08375 PF00005 ABC transporter BF28_RS08385 PF02082 Transcriptional regulator BF28_RS08390 PF00230 Major intrinsic protein BF28_RS08395 PF13536 Putative multidrug resistance efflux transporter BF28_RS08400 PF07883 Cupin domain BF28_RS08400 PF01381 Helix-turn-helix BF28_RS08405 PF04024 PspC domain BF28_RS08415 PF00072 Response regulator receiver domain BF28_RS08415 PF04397 LytTr DNA-binding domain BF28_RS08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS08420 PF07694 5TMR of 5TMR-LYT BF28_RS08420 PF06580 Histidine kinase BF28_RS08425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS08425 PF00005 ABC transporter BF28_RS08430 PF00005 ABC transporter BF28_RS08430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS08435 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS08440 PF12911 N-terminal TM domain of oligopeptide transport permease C BF28_RS08440 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS08445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS08450 PF07969 Amidohydrolase family BF28_RS08455 PF07969 Amidohydrolase family BF28_RS08465 PF00860 Permease family BF28_RS08470 PF00196 Bacterial regulatory proteins, luxR family BF28_RS08480 PF01177 Asp/Glu/Hydantoin racemase BF28_RS08485 PF10646 Sporulation and spore germination BF28_RS08490 PF03725 3' exoribonuclease family, domain 2 BF28_RS08490 PF01138 3' exoribonuclease family, domain 1 BF28_RS08495 PF01725 Ham1 family BF28_RS08500 PF12850 Calcineurin-like phosphoesterase superfamily domain BF28_RS08515 PF02899 Phage integrase, N-terminal SAM-like domain BF28_RS08515 PF00589 Phage integrase family BF28_RS08525 PF00239 Resolvase, N terminal domain BF28_RS08525 PF02796 Helix-turn-helix domain of resolvase BF28_RS08570 PF08000 Bacterial PH domain BF28_RS08570 PF11724 YvbH-like oligomerisation region BF28_RS08590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BF28_RS08590 PF05698 Bacterial trigger factor protein (TF) C-terminus BF28_RS08590 PF05697 Bacterial trigger factor protein (TF) BF28_RS08595 PF07724 AAA domain (Cdc48 subfamily) BF28_RS08595 PF10431 C-terminal, D2-small domain, of ClpB protein BF28_RS08595 PF06689 ClpX C4-type zinc finger BF28_RS08600 PF00004 ATPase family associated with various cellular activities (AAA) BF28_RS08600 PF05362 Lon protease (S16) C-terminal proteolytic domain BF28_RS08605 PF05362 Lon protease (S16) C-terminal proteolytic domain BF28_RS08605 PF00004 ATPase family associated with various cellular activities (AAA) BF28_RS08605 PF02190 ATP-dependent protease La (LON) substrate-binding domain BF28_RS08610 PF01926 50S ribosome-binding GTPase BF28_RS08615 PF02566 OsmC-like protein BF28_RS08620 PF01047 MarR family BF28_RS08625 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BF28_RS08625 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BF28_RS08625 PF01488 Shikimate / quinate 5-dehydrogenase BF28_RS08630 PF01578 Cytochrome C assembly protein BF28_RS08635 PF03900 Porphobilinogen deaminase, C-terminal domain BF28_RS08635 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BF28_RS08640 PF02602 Uroporphyrinogen-III synthase HemD BF28_RS08645 PF00490 Delta-aminolevulinic acid dehydratase BF28_RS08650 PF00202 Aminotransferase class-III BF28_RS08655 PF01476 LysM domain BF28_RS08665 PF08264 Anticodon-binding domain of tRNA BF28_RS08665 PF00133 tRNA synthetases class I (I, L, M and V) BF28_RS08665 PF10458 Valyl tRNA synthetase tRNA binding arm BF28_RS08670 PF08245 Mur ligase middle domain BF28_RS08670 PF02875 Mur ligase family, glutamate ligase domain BF28_RS08680 PF02545 Maf-like protein BF28_RS08685 PF04002 RadC-like JAB domain BF28_RS08695 PF04085 rod shape-determining protein MreC BF28_RS08705 PF03775 Septum formation inhibitor MinC, C-terminal domain BF28_RS08710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BF28_RS08715 PF01551 Peptidase family M23 BF28_RS08720 PF02163 Peptidase family M50 BF28_RS08725 PF00575 S1 RNA binding domain BF28_RS08725 PF10150 Ribonuclease E/G family BF28_RS08730 PF00829 Ribosomal prokaryotic L21 protein BF28_RS08735 PF04327 Cysteine protease Prp BF28_RS08740 PF01016 Ribosomal L27 protein BF28_RS08745 PF14682 Sporulation initiation phospho-transferase B, C-terminal BF28_RS08745 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF28_RS08750 PF09269 Domain of unknown function (DUF1967) BF28_RS08750 PF01018 GTP1/OBG BF28_RS08750 PF01926 50S ribosome-binding GTPase BF28_RS08755 PF00486 Transcriptional regulatory protein, C terminal BF28_RS08755 PF00072 Response regulator receiver domain BF28_RS08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS08765 PF00005 ABC transporter BF28_RS08770 PF02687 FtsX-like permease family BF28_RS08775 PF02687 FtsX-like permease family BF28_RS08780 PF00800 Prephenate dehydratase BF28_RS08780 PF01842 ACT domain BF28_RS08785 PF03475 3-alpha domain BF28_RS08785 PF03473 MOSC domain BF28_RS08790 PF08279 HTH domain BF28_RS08790 PF02829 3H domain BF28_RS08795 PF00266 Aminotransferase class-V BF28_RS08800 PF00890 FAD binding domain BF28_RS08800 PF02910 Fumarate reductase flavoprotein C-term BF28_RS08805 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BF28_RS08805 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BF28_RS08810 PF02445 Quinolinate synthetase A protein BF28_RS08815 PF01476 LysM domain BF28_RS08830 PF01022 Bacterial regulatory protein, arsR family BF28_RS08835 PF00892 EamA-like transporter family BF28_RS08845 PF01497 Periplasmic binding protein BF28_RS08850 PF01330 RuvA N terminal domain BF28_RS08850 PF07499 RuvA, C-terminal domain BF28_RS08855 PF05491 RuvB C-terminal winged helix domain BF28_RS08855 PF17864 RuvB AAA lid domain BF28_RS08855 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF28_RS08860 PF11146 Protein of unknown function (DUF2905) BF28_RS08865 PF02547 Queuosine biosynthesis protein BF28_RS08870 PF01702 Queuine tRNA-ribosyltransferase BF28_RS08875 PF02699 Preprotein translocase subunit BF28_RS08885 PF04239 Protein of unknown function (DUF421) BF28_RS08890 PF14667 Polysaccharide biosynthesis C-terminal domain BF28_RS08890 PF01943 Polysaccharide biosynthesis protein BF28_RS08895 PF13797 Post-transcriptional regulator BF28_RS08900 PF02355 Protein export membrane protein BF28_RS08900 PF07549 SecD/SecF GG Motif BF28_RS08905 PF01545 Cation efflux family BF28_RS08905 PF16916 Dimerisation domain of Zinc Transporter BF28_RS08910 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BF28_RS08910 PF02272 DHHA1 domain BF28_RS08910 PF17768 RecJ OB domain BF28_RS08910 PF01368 DHH family BF28_RS08915 PF00156 Phosphoribosyl transferase domain BF28_RS08920 PF02824 TGS domain BF28_RS08920 PF13291 ACT domain BF28_RS08920 PF04607 Region found in RelA / SpoT proteins BF28_RS08925 PF02580 D-Tyr-tRNA(Tyr) deacylase BF28_RS08940 PF03129 Anticodon binding domain BF28_RS08940 PF13393 Histidyl-tRNA synthetase BF28_RS08945 PF00152 tRNA synthetases class II (D, K and N) BF28_RS08945 PF01336 OB-fold nucleic acid binding domain BF28_RS08945 PF02938 GAD domain BF28_RS08950 PF00899 ThiF family BF28_RS08960 PF16193 AAA C-terminal domain BF28_RS08960 PF12002 MgsA AAA+ ATPase C terminal BF28_RS08960 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF28_RS08965 PF02082 Transcriptional regulator BF28_RS08970 PF00266 Aminotransferase class-V BF28_RS08985 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BF28_RS08985 PF14490 Helix-hairpin-helix containing domain BF28_RS08985 PF13538 UvrD-like helicase C-terminal domain BF28_RS09005 PF01594 AI-2E family transporter BF28_RS09015 PF01411 tRNA synthetases class II (A) BF28_RS09015 PF02272 DHHA1 domain BF28_RS09015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF28_RS09025 PF03652 Holliday junction resolvase BF28_RS09030 PF06949 Protein of unknown function (DUF1292) BF28_RS09035 PF02618 YceG-like family BF28_RS09040 PF01596 O-methyltransferase BF28_RS09045 PF01136 Peptidase family U32 BF28_RS09050 PF01136 Peptidase family U32 BF28_RS09050 PF16325 Peptidase family U32 C-terminal domain BF28_RS09055 PF00485 Phosphoribulokinase / Uridine kinase family BF28_RS09060 PF01272 Transcription elongation factor, GreA/GreB, C-term BF28_RS09060 PF03449 Transcription elongation factor, N-terminal BF28_RS09065 PF00905 Penicillin binding protein transpeptidase domain BF28_RS09065 PF03717 Penicillin-binding Protein dimerisation domain BF28_RS09080 PF08241 Methyltransferase domain BF28_RS09085 PF01048 Phosphorylase superfamily BF28_RS09090 PF00291 Pyridoxal-phosphate dependent enzyme BF28_RS09095 PF01053 Cys/Met metabolism PLP-dependent enzyme BF28_RS09100 PF00171 Aldehyde dehydrogenase family BF28_RS09100 PF00465 Iron-containing alcohol dehydrogenase BF28_RS09105 PF14143 YrhC-like protein BF28_RS09110 PF01497 Periplasmic binding protein BF28_RS09115 PF01032 FecCD transport family BF28_RS09120 PF00005 ABC transporter BF28_RS09150 PF07681 DoxX BF28_RS09155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS09165 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BF28_RS09170 PF02225 PA domain BF28_RS09170 PF05922 Peptidase inhibitor I9 BF28_RS09170 PF00082 Subtilase family BF28_RS09170 PF13860 FlgD Ig-like domain BF28_RS09205 PF00561 alpha/beta hydrolase fold BF28_RS09205 PF08386 TAP-like protein BF28_RS09215 PF00245 Alkaline phosphatase BF28_RS09225 PF04607 Region found in RelA / SpoT proteins BF28_RS09230 PF00881 Nitroreductase family BF28_RS09235 PF00471 Ribosomal protein L33 BF28_RS09240 PF16244 Domain of unknown function (DUF4901) BF28_RS09260 PF04545 Sigma-70, region 4 BF28_RS09260 PF04542 Sigma-70 region 2 BF28_RS09265 PF02666 Phosphatidylserine decarboxylase BF28_RS09280 PF01926 50S ribosome-binding GTPase BF28_RS09285 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BF28_RS09285 PF08501 Shikimate dehydrogenase substrate binding domain BF28_RS09285 PF01488 Shikimate / quinate 5-dehydrogenase BF28_RS09290 PF01985 CRS1 / YhbY (CRM) domain BF28_RS09295 PF01467 Cytidylyltransferase-like BF28_RS09300 PF01966 HD domain BF28_RS09310 PF13649 Methyltransferase domain BF28_RS09315 PF03807 NADP oxidoreductase coenzyme F420-dependent BF28_RS09315 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF28_RS09320 PF10531 SLBB domain BF28_RS09325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF28_RS09330 PF13567 Domain of unknown function (DUF4131) BF28_RS09330 PF00753 Metallo-beta-lactamase superfamily BF28_RS09330 PF03772 Competence protein BF28_RS09335 PF14141 YqzM-like protein BF28_RS09340 PF06144 DNA polymerase III, delta subunit BF28_RS09345 PF01649 Ribosomal protein S20 BF28_RS09350 PF03418 Germination protease BF28_RS09360 PF00009 Elongation factor Tu GTP binding domain BF28_RS09360 PF00679 Elongation factor G C-terminus BF28_RS09360 PF03144 Elongation factor Tu domain 2 BF28_RS09360 PF06421 GTP-binding protein LepA C-terminus BF28_RS09365 PF01638 HxlR-like helix-turn-helix BF28_RS09370 PF04055 Radical SAM superfamily BF28_RS09370 PF06969 HemN C-terminal domain BF28_RS09375 PF01628 HrcA protein C terminal domain BF28_RS09380 PF01025 GrpE BF28_RS09385 PF00012 Hsp70 protein BF28_RS09390 PF00226 DnaJ domain BF28_RS09390 PF00684 DnaJ central domain BF28_RS09390 PF01556 DnaJ C terminal domain BF28_RS09400 PF04452 RNA methyltransferase BF28_RS09405 PF01938 TRAM domain BF28_RS09405 PF00919 Uncharacterized protein family UPF0004 BF28_RS09405 PF04055 Radical SAM superfamily BF28_RS09410 PF01165 Ribosomal protein S21 BF28_RS09415 PF09424 Yqey-like protein BF28_RS09420 PF07873 YabP family BF28_RS09430 PF06898 Putative stage IV sporulation protein YqfD BF28_RS09435 PF02562 PhoH-like protein BF28_RS09440 PF07698 7TM receptor with intracellular HD hydrolase BF28_RS09440 PF07697 7TM-HD extracellular BF28_RS09440 PF01966 HD domain BF28_RS09445 PF02130 Uncharacterized protein family UPF0054 BF28_RS09450 PF01219 Prokaryotic diacylglycerol kinase BF28_RS09455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF28_RS09460 PF01926 50S ribosome-binding GTPase BF28_RS09460 PF07650 KH domain BF28_RS09470 PF02565 Recombination protein O C terminal BF28_RS09470 PF11967 Recombination protein O N terminal BF28_RS09475 PF00571 CBS domain BF28_RS09475 PF08279 HTH domain BF28_RS09480 PF03618 Kinase/pyrophosphorylase BF28_RS09495 PF01807 CHC2 zinc finger BF28_RS09495 PF10410 DnaB-helicase binding domain of primase BF28_RS09495 PF08275 DNA primase catalytic core, N-terminal domain BF28_RS09500 PF00140 Sigma-70 factor, region 1.2 BF28_RS09500 PF04545 Sigma-70, region 4 BF28_RS09500 PF04542 Sigma-70 region 2 BF28_RS09500 PF03979 Sigma-70 factor, region 1.1 BF28_RS09500 PF04539 Sigma-70 region 3 BF28_RS09505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF28_RS09510 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BF28_RS09515 PF01784 NIF3 (NGG1p interacting factor 3) BF28_RS09520 PF02401 LytB protein BF28_RS09530 PF00271 Helicase conserved C-terminal domain BF28_RS09530 PF00270 DEAD/DEAH box helicase BF28_RS09535 PF01261 Xylose isomerase-like TIM barrel BF28_RS09540 PF11116 Protein of unknown function (DUF2624) BF28_RS09545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF28_RS09545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS09550 PF00005 ABC transporter BF28_RS09555 PF00950 ABC 3 transport family BF28_RS09560 PF01475 Ferric uptake regulator family BF28_RS09565 PF04551 GcpE protein BF28_RS09585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF28_RS09585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF28_RS09590 PF07690 Major Facilitator Superfamily BF28_RS09595 PF00905 Penicillin binding protein transpeptidase domain BF28_RS09595 PF03717 Penicillin-binding Protein dimerisation domain BF28_RS09600 PF12849 PBP superfamily domain BF28_RS09605 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS09610 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS09615 PF00005 ABC transporter BF28_RS09620 PF01895 PhoU domain BF28_RS09625 PF00483 Nucleotidyl transferase BF28_RS09630 PF00471 Ribosomal protein L33 BF28_RS09635 PF01812 5-formyltetrahydrofolate cyclo-ligase family BF28_RS09640 PF06014 Bacterial protein of unknown function (DUF910) BF28_RS09645 PF00480 ROK family BF28_RS09650 PF10958 Protein of unknown function (DUF2759) BF28_RS09655 PF00753 Metallo-beta-lactamase superfamily BF28_RS09665 PF01022 Bacterial regulatory protein, arsR family BF28_RS09675 PF01053 Cys/Met metabolism PLP-dependent enzyme BF28_RS09680 PF01053 Cys/Met metabolism PLP-dependent enzyme BF28_RS09690 PF02574 Homocysteine S-methyltransferase BF28_RS09690 PF02219 Methylenetetrahydrofolate reductase BF28_RS09695 PF00809 Pterin binding enzyme BF28_RS09695 PF02607 B12 binding domain BF28_RS09695 PF02965 Vitamin B12 dependent methionine synthase, activation domain BF28_RS09695 PF02310 B12 binding domain BF28_RS09695 PF02574 Homocysteine S-methyltransferase BF28_RS09700 PF03033 Glycosyltransferase family 28 N-terminal domain BF28_RS09700 PF04101 Glycosyltransferase family 28 C-terminal domain BF28_RS09730 PF00375 Sodium:dicarboxylate symporter family BF28_RS09735 PF11117 Protein of unknown function (DUF2626) BF28_RS09745 PF00437 Type II/IV secretion system protein BF28_RS09750 PF00482 Type II secretion system (T2SS), protein F BF28_RS09760 PF07963 Prokaryotic N-terminal methylation motif BF28_RS09785 PF01202 Shikimate kinase BF28_RS09790 PF14038 YqzE-like protein BF28_RS09810 PF11079 Bacterial protein YqhG of unknown function BF28_RS09815 PF00271 Helicase conserved C-terminal domain BF28_RS09815 PF00176 SNF2 family N-terminal domain BF28_RS09820 PF08669 Glycine cleavage T-protein C-terminal barrel domain BF28_RS09820 PF01571 Aminomethyltransferase folate-binding domain BF28_RS09825 PF02347 Glycine cleavage system P-protein BF28_RS09830 PF02347 Glycine cleavage system P-protein BF28_RS09845 PF00392 Bacterial regulatory proteins, gntR family BF28_RS09850 PF00005 ABC transporter BF28_RS09890 PF00893 Small Multidrug Resistance protein BF28_RS09895 PF00893 Small Multidrug Resistance protein BF28_RS09905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF28_RS09905 PF00356 Bacterial regulatory proteins, lacI family BF28_RS09915 PF00581 Rhodanese-like domain BF28_RS09920 PF03099 Biotin/lipoate A/B protein ligase family BF28_RS09945 PF01325 Iron dependent repressor, N-terminal DNA binding domain BF28_RS09945 PF02742 Iron dependent repressor, metal binding and dimerisation domain BF28_RS09950 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS09960 PF07136 Protein of unknown function (DUF1385) BF28_RS09965 PF11085 Conserved membrane protein YqhR BF28_RS09970 PF01220 Dehydroquinase class II BF28_RS09975 PF01321 Creatinase/Prolidase N-terminal domain BF28_RS09975 PF00557 Metallopeptidase family M24 BF28_RS09980 PF08207 Elongation factor P (EF-P) KOW-like domain BF28_RS09980 PF09285 Elongation factor P, C-terminal BF28_RS09980 PF01132 Elongation factor P (EF-P) OB domain BF28_RS10005 PF09548 Stage III sporulation protein AB (spore_III_AB) BF28_RS10010 PF06686 Stage III sporulation protein AC/AD protein family BF28_RS10015 PF06686 Stage III sporulation protein AC/AD protein family BF28_RS10020 PF09546 Stage III sporulation protein AE (spore_III_AE) BF28_RS10025 PF09581 Stage III sporulation protein AF (Spore_III_AF) BF28_RS10035 PF12685 SpoIIIAH-like protein BF28_RS10045 PF00364 Biotin-requiring enzyme BF28_RS10050 PF02785 Biotin carboxylase C-terminal domain BF28_RS10050 PF00289 Biotin carboxylase, N-terminal domain BF28_RS10050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF28_RS10055 PF03780 Asp23 family, cell envelope-related function BF28_RS10060 PF01029 NusB family BF28_RS10065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BF28_RS10065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BF28_RS10070 PF13742 OB-fold nucleic acid binding domain BF28_RS10070 PF02601 Exonuclease VII, large subunit BF28_RS10075 PF02609 Exonuclease VII small subunit BF28_RS10080 PF00348 Polyprenyl synthetase BF28_RS10085 PF02780 Transketolase, C-terminal domain BF28_RS10085 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BF28_RS10085 PF02779 Transketolase, pyrimidine binding domain BF28_RS10090 PF01728 FtsJ-like methyltransferase BF28_RS10090 PF01479 S4 domain BF28_RS10095 PF01316 Arginine repressor, DNA binding domain BF28_RS10095 PF02863 Arginine repressor, C-terminal domain BF28_RS10100 PF13476 AAA domain BF28_RS10105 PF17820 PDZ domain BF28_RS10105 PF05580 SpoIVB peptidase S55 BF28_RS10110 PF00072 Response regulator receiver domain BF28_RS10110 PF08769 Sporulation initiation factor Spo0A C terminal BF28_RS10135 PF14174 YycC-like protein BF28_RS10140 PF03009 Glycerophosphoryl diester phosphodiesterase family BF28_RS10145 PF11118 Protein of unknown function (DUF2627) BF28_RS10150 PF00158 Sigma-54 interaction domain BF28_RS10150 PF00989 PAS fold BF28_RS10150 PF02954 Bacterial regulatory protein, Fis family BF28_RS10160 PF01515 Phosphate acetyl/butaryl transferase BF28_RS10165 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF28_RS10165 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF28_RS10170 PF00871 Acetokinase family BF28_RS10175 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS10175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF28_RS10180 PF00676 Dehydrogenase E1 component BF28_RS10185 PF02779 Transketolase, pyrimidine binding domain BF28_RS10185 PF02780 Transketolase, C-terminal domain BF28_RS10190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF28_RS10190 PF00364 Biotin-requiring enzyme BF28_RS10190 PF02817 e3 binding domain BF28_RS10200 PF01098 Cell cycle protein BF28_RS10205 PF04239 Protein of unknown function (DUF421) BF28_RS10210 PF09297 NADH pyrophosphatase zinc ribbon domain BF28_RS10210 PF00293 NUDIX domain BF28_RS10215 PF11208 Protein of unknown function (DUF2992) BF28_RS10220 PF06491 Disulphide isomerase BF28_RS10230 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF28_RS10235 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS10240 PF00005 ABC transporter BF28_RS10245 PF11728 Putative aromatic acid exporter C-terminal domain BF28_RS10245 PF06081 Aromatic acid exporter family member 1 BF28_RS10250 PF03734 L,D-transpeptidase catalytic domain BF28_RS10265 PF13302 Acetyltransferase (GNAT) domain BF28_RS10270 PF07687 Peptidase dimerisation domain BF28_RS10270 PF01546 Peptidase family M20/M25/M40 BF28_RS10280 PF11798 IMS family HHH motif BF28_RS10280 PF00817 impB/mucB/samB family BF28_RS10280 PF11799 impB/mucB/samB family C-terminal domain BF28_RS10290 PF00753 Metallo-beta-lactamase superfamily BF28_RS10290 PF12706 Beta-lactamase superfamily domain BF28_RS10300 PF03315 Serine dehydratase beta chain BF28_RS10300 PF01842 ACT domain BF28_RS10305 PF03313 Serine dehydratase alpha chain BF28_RS10310 PF03807 NADP oxidoreductase coenzyme F420-dependent BF28_RS10310 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF28_RS10315 PF00753 Metallo-beta-lactamase superfamily BF28_RS10320 PF00106 short chain dehydrogenase BF28_RS10330 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF28_RS10330 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF28_RS10335 PF01960 ArgJ family BF28_RS10340 PF00696 Amino acid kinase family BF28_RS10345 PF00202 Aminotransferase class-III BF28_RS10350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF28_RS10350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF28_RS10365 PF13404 AsnC-type helix-turn-helix domain BF28_RS10365 PF01037 Lrp/AsnC ligand binding domain BF28_RS10375 PF02872 5'-nucleotidase, C-terminal domain BF28_RS10375 PF00149 Calcineurin-like phosphoesterase BF28_RS10380 PF03553 Na+/H+ antiporter family BF28_RS10390 PF00202 Aminotransferase class-III BF28_RS10400 PF00155 Aminotransferase class I and II BF28_RS10405 PF08241 Methyltransferase domain BF28_RS10405 PF12697 Alpha/beta hydrolase family BF28_RS10410 PF13847 Methyltransferase domain BF28_RS10415 PF04055 Radical SAM superfamily BF28_RS10415 PF06968 Biotin and Thiamin Synthesis associated domain BF28_RS10425 PF00885 6,7-dimethyl-8-ribityllumazine synthase BF28_RS10430 PF00925 GTP cyclohydrolase II BF28_RS10430 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BF28_RS10435 PF00677 Lumazine binding domain BF28_RS10440 PF01872 RibD C-terminal domain BF28_RS10440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF28_RS10450 PF10827 Protein of unknown function (DUF2552) BF28_RS10455 PF12146 Serine aminopeptidase, S33 BF28_RS10460 PF00583 Acetyltransferase (GNAT) family BF28_RS10465 PF00356 Bacterial regulatory proteins, lacI family BF28_RS10470 PF03553 Na+/H+ antiporter family BF28_RS10470 PF13726 Na+-H+ antiporter family BF28_RS10475 PF12146 Serine aminopeptidase, S33 BF28_RS10485 PF00746 LPXTG cell wall anchor motif BF28_RS10485 PF02872 5'-nucleotidase, C-terminal domain BF28_RS10485 PF00149 Calcineurin-like phosphoesterase BF28_RS10485 PF00565 Staphylococcal nuclease homologue BF28_RS10495 PF13673 Acetyltransferase (GNAT) domain BF28_RS10495 PF04229 GrpB protein BF28_RS10500 PF00248 Aldo/keto reductase family BF28_RS10505 PF00248 Aldo/keto reductase family BF28_RS10510 PF13072 Mother cell inhibitor of FtsZ BF28_RS10515 PF00293 NUDIX domain BF28_RS10525 PF01944 Stage II sporulation protein M BF28_RS10530 PF01475 Ferric uptake regulator family BF28_RS10535 PF14004 Protein of unknown function (DUF4227) BF28_RS10540 PF02899 Phage integrase, N-terminal SAM-like domain BF28_RS10540 PF00589 Phage integrase family BF28_RS10550 PF01676 Metalloenzyme superfamily BF28_RS10555 PF01048 Phosphorylase superfamily BF28_RS10560 PF02885 Glycosyl transferase family, helical bundle domain BF28_RS10560 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BF28_RS10560 PF00591 Glycosyl transferase family, a/b domain BF28_RS10565 PF01544 CorA-like Mg2+ transporter protein BF28_RS10570 PF00860 Permease family BF28_RS10580 PF01047 MarR family BF28_RS10605 PF00005 ABC transporter BF28_RS10610 PF00392 Bacterial regulatory proteins, gntR family BF28_RS10615 PF00768 D-alanyl-D-alanine carboxypeptidase BF28_RS10615 PF07943 Penicillin-binding protein 5, C-terminal domain BF28_RS10620 PF01740 STAS domain BF28_RS10625 PF13581 Histidine kinase-like ATPase domain BF28_RS10630 PF04545 Sigma-70, region 4 BF28_RS10630 PF04542 Sigma-70 region 2 BF28_RS10630 PF04539 Sigma-70 region 3 BF28_RS10635 PF00209 Sodium:neurotransmitter symporter family BF28_RS10645 PF12164 Stage V sporulation protein AA BF28_RS10650 PF13782 Stage V sporulation protein AB BF28_RS10655 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF28_RS10660 PF07451 Stage V sporulation protein AD (SpoVAD) BF28_RS10665 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF28_RS10670 PF14097 Stage V sporulation protein AE1 BF28_RS10675 PF03323 Bacillus/Clostridium GerA spore germination protein BF28_RS10685 PF06207 Protein of unknown function (DUF1002) BF28_RS10690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BF28_RS10700 PF00583 Acetyltransferase (GNAT) family BF28_RS10705 PF03745 Domain of unknown function (DUF309) BF28_RS10715 PF02616 Segregation and condensation protein ScpA BF28_RS10725 PF04079 Segregation and condensation complex subunit ScpB BF28_RS10735 PF01979 Amidohydrolase family BF28_RS10740 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BF28_RS10745 PF07702 UTRA domain BF28_RS10745 PF00392 Bacterial regulatory proteins, gntR family BF28_RS10755 PF03123 CAT RNA binding domain BF28_RS10755 PF00874 PRD domain BF28_RS10760 PF00367 phosphotransferase system, EIIB BF28_RS10760 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF28_RS10760 PF02378 Phosphotransferase system, EIIC BF28_RS10765 PF00381 PTS HPr component phosphorylation site BF28_RS10770 PF02896 PEP-utilising enzyme, TIM barrel domain BF28_RS10770 PF00391 PEP-utilising enzyme, mobile domain BF28_RS10770 PF05524 PEP-utilising enzyme, N-terminal BF28_RS10785 PF00881 Nitroreductase family BF28_RS10790 PF00990 Diguanylate cyclase, GGDEF domain BF28_RS10790 PF08448 PAS fold BF28_RS10795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF28_RS10795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF28_RS10810 PF03079 ARD/ARD' family BF28_RS10815 PF00596 Class II Aldolase and Adducin N-terminal domain BF28_RS10825 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BF28_RS10825 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BF28_RS10830 PF00155 Aminotransferase class I and II BF28_RS10835 PF00795 Carbon-nitrogen hydrolase BF28_RS10840 PF01636 Phosphotransferase enzyme family BF28_RS10845 PF01008 Initiation factor 2 subunit family BF28_RS10860 PF03551 Transcriptional regulator PadR-like family BF28_RS10895 PF00293 NUDIX domain BF28_RS10900 PF00108 Thiolase, N-terminal domain BF28_RS10900 PF02803 Thiolase, C-terminal domain BF28_RS10905 PF02463 RecF/RecN/SMC N terminal domain BF28_RS10940 PF03459 TOBE domain BF28_RS10940 PF17912 MalK OB fold domain BF28_RS10940 PF00005 ABC transporter BF28_RS10945 PF16657 Maltogenic Amylase, C-terminal domain BF28_RS10945 PF00128 Alpha amylase, catalytic domain BF28_RS10950 PF02903 Alpha amylase, N-terminal ig-like domain BF28_RS10950 PF00128 Alpha amylase, catalytic domain BF28_RS10950 PF16657 Maltogenic Amylase, C-terminal domain BF28_RS10955 PF13416 Bacterial extracellular solute-binding protein BF28_RS10960 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS10965 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS10970 PF00356 Bacterial regulatory proteins, lacI family BF28_RS10970 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF28_RS10975 PF00155 Aminotransferase class I and II BF28_RS10985 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS10995 PF14040 Deoxyribonuclease NucA/NucB BF28_RS11005 PF08267 Cobalamin-independent synthase, N-terminal domain BF28_RS11005 PF01717 Cobalamin-independent synthase, Catalytic domain BF28_RS11020 PF07690 Major Facilitator Superfamily BF28_RS11050 PF14177 YkyB-like protein BF28_RS11055 PF02541 Ppx/GppA phosphatase family BF28_RS11060 PF13090 Polyphosphate kinase C-terminal domain 2 BF28_RS11060 PF02503 Polyphosphate kinase middle domain BF28_RS11060 PF17941 Polyphosphate kinase C-terminal domain 1 BF28_RS11060 PF13089 Polyphosphate kinase N-terminal domain BF28_RS11070 PF00149 Calcineurin-like phosphoesterase BF28_RS11070 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF28_RS11080 PF00563 EAL domain BF28_RS11080 PF10388 EAL-domain associated signalling protein domain BF28_RS11095 PF08796 Protein of unknown function (DUF1797) BF28_RS11105 PF04308 Ribonuclease H-like BF28_RS11120 PF03466 LysR substrate binding domain BF28_RS11120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS11125 PF14602 Hexapeptide repeat of succinyl-transferase BF28_RS11125 PF00132 Bacterial transferase hexapeptide (six repeats) BF28_RS11125 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BF28_RS11130 PF01546 Peptidase family M20/M25/M40 BF28_RS11130 PF07687 Peptidase dimerisation domain BF28_RS11140 PF02254 TrkA-N domain BF28_RS11140 PF02080 TrkA-C domain BF28_RS11145 PF17770 Ribonuclease J C-terminal domain BF28_RS11145 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF28_RS11145 PF00753 Metallo-beta-lactamase superfamily BF28_RS11150 PF07288 Protein of unknown function (DUF1447) BF28_RS11160 PF01327 Polypeptide deformylase BF28_RS11170 PF00676 Dehydrogenase E1 component BF28_RS11175 PF02780 Transketolase, C-terminal domain BF28_RS11175 PF02779 Transketolase, pyrimidine binding domain BF28_RS11180 PF02817 e3 binding domain BF28_RS11180 PF00364 Biotin-requiring enzyme BF28_RS11180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF28_RS11185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF28_RS11185 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS11225 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF28_RS11225 PF01276 Orn/Lys/Arg decarboxylase, major domain BF28_RS11230 PF05256 Uncharacterised protein family (UPF0223) BF28_RS11235 PF06335 Protein of unknown function (DUF1054) BF28_RS11245 PF00459 Inositol monophosphatase family BF28_RS11255 PF03144 Elongation factor Tu domain 2 BF28_RS11255 PF00009 Elongation factor Tu GTP binding domain BF28_RS11255 PF14492 Elongation Factor G, domain II BF28_RS11255 PF00679 Elongation factor G C-terminus BF28_RS11260 PF14036 YlaH-like protein BF28_RS11270 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BF28_RS11280 PF02562 PhoH-like protein BF28_RS11280 PF13638 PIN domain BF28_RS11290 PF07408 Protein of unknown function (DUF1507) BF28_RS11295 PF01098 Cell cycle protein BF28_RS11300 PF02436 Conserved carboxylase domain BF28_RS11300 PF00682 HMGL-like BF28_RS11300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF28_RS11300 PF00364 Biotin-requiring enzyme BF28_RS11300 PF00289 Biotin carboxylase, N-terminal domain BF28_RS11300 PF02785 Biotin carboxylase C-terminal domain BF28_RS11305 PF02628 Cytochrome oxidase assembly protein BF28_RS11310 PF01040 UbiA prenyltransferase family BF28_RS11315 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BF28_RS11315 PF00034 Cytochrome c BF28_RS11315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BF28_RS11320 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF28_RS11325 PF00510 Cytochrome c oxidase subunit III BF28_RS11330 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BF28_RS11335 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BF28_RS11340 PF00795 Carbon-nitrogen hydrolase BF28_RS11345 PF08868 YugN-like family BF28_RS11350 PF14504 CAP-associated N-terminal BF28_RS11350 PF00188 Cysteine-rich secretory protein family BF28_RS11355 PF14071 Putative coat protein BF28_RS11360 PF14003 YlbE-like protein BF28_RS11365 PF00300 Histidine phosphatase superfamily (branch 1) BF28_RS11370 PF06133 Control of competence regulator ComK, YlbF/YmcA BF28_RS11375 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BF28_RS11390 PF01467 Cytidylyltransferase-like BF28_RS11395 PF07670 Nucleoside recognition BF28_RS11400 PF01734 Patatin-like phospholipase BF28_RS11405 PF05362 Lon protease (S16) C-terminal proteolytic domain BF28_RS11405 PF13180 PDZ domain BF28_RS11410 PF05636 HIGH Nucleotidyl Transferase BF28_RS11415 PF02620 Large ribosomal RNA subunit accumulation protein YceD BF28_RS11420 PF01783 Ribosomal L32p protein family BF28_RS11430 PF00583 Acetyltransferase (GNAT) family BF28_RS11435 PF02558 Ketopantoate reductase PanE/ApbA BF28_RS11435 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF28_RS11440 PF10079 Bacillithiol biosynthesis BshC BF28_RS11445 PF01795 MraW methylase family BF28_RS11450 PF04977 Septum formation initiator BF28_RS11455 PF00905 Penicillin binding protein transpeptidase domain BF28_RS11455 PF03793 PASTA domain BF28_RS11455 PF03717 Penicillin-binding Protein dimerisation domain BF28_RS11460 PF00905 Penicillin binding protein transpeptidase domain BF28_RS11460 PF03717 Penicillin-binding Protein dimerisation domain BF28_RS11460 PF03793 PASTA domain BF28_RS11465 PF02875 Mur ligase family, glutamate ligase domain BF28_RS11465 PF08245 Mur ligase middle domain BF28_RS11465 PF01225 Mur ligase family, catalytic domain BF28_RS11470 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BF28_RS11470 PF00953 Glycosyl transferase family 4 BF28_RS11475 PF08245 Mur ligase middle domain BF28_RS11475 PF02875 Mur ligase family, glutamate ligase domain BF28_RS11480 PF01098 Cell cycle protein BF28_RS11485 PF03033 Glycosyltransferase family 28 N-terminal domain BF28_RS11485 PF04101 Glycosyltransferase family 28 C-terminal domain BF28_RS11490 PF01565 FAD binding domain BF28_RS11490 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF28_RS11495 PF03799 Cell division protein FtsQ BF28_RS11495 PF08478 POTRA domain, FtsQ-type BF28_RS11500 PF02491 SHS2 domain inserted in FTSA BF28_RS11505 PF12327 FtsZ family, C-terminal domain BF28_RS11505 PF00091 Tubulin/FtsZ family, GTPase domain BF28_RS11510 PF03419 Sporulation factor SpoIIGA BF28_RS11515 PF04545 Sigma-70, region 4 BF28_RS11515 PF04542 Sigma-70 region 2 BF28_RS11520 PF04539 Sigma-70 region 3 BF28_RS11520 PF04545 Sigma-70, region 4 BF28_RS11520 PF04542 Sigma-70 region 2 BF28_RS11525 PF05239 PRC-barrel domain BF28_RS11530 PF02578 Multi-copper polyphenol oxidoreductase laccase BF28_RS11535 PF01168 Alanine racemase, N-terminal domain BF28_RS11540 PF04472 Cell division protein SepF BF28_RS11545 PF02325 YGGT family BF28_RS11550 PF17774 Putative RNA-binding domain in YlmH BF28_RS11550 PF01479 S4 domain BF28_RS11555 PF05103 DivIVA protein BF28_RS11560 PF00133 tRNA synthetases class I (I, L, M and V) BF28_RS11560 PF08264 Anticodon-binding domain of tRNA BF28_RS11560 PF06827 Zinc finger found in FPG and IleRS BF28_RS11570 PF01252 Signal peptidase (SPase) II BF28_RS11575 PF00849 RNA pseudouridylate synthase BF28_RS11575 PF01479 S4 domain BF28_RS11580 PF00156 Phosphoribosyl transferase domain BF28_RS11585 PF00860 Permease family BF28_RS11590 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF28_RS11590 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF28_RS11595 PF01979 Amidohydrolase family BF28_RS11600 PF00117 Glutamine amidotransferase class-I BF28_RS11600 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BF28_RS11605 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BF28_RS11605 PF02142 MGS-like domain BF28_RS11605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF28_RS11610 PF00175 Oxidoreductase NAD-binding domain BF28_RS11610 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BF28_RS11615 PF01180 Dihydroorotate dehydrogenase BF28_RS11620 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BF28_RS11625 PF00156 Phosphoribosyl transferase domain BF28_RS11655 PF01321 Creatinase/Prolidase N-terminal domain BF28_RS11655 PF00557 Metallopeptidase family M24 BF28_RS11660 PF05670 NFACT protein RNA binding domain BF28_RS11665 PF00690 Cation transporter/ATPase, N-terminus BF28_RS11665 PF00689 Cation transporting ATPase, C-terminus BF28_RS11670 PF08340 Domain of unknown function (DUF1732) BF28_RS11670 PF03755 YicC-like family, N-terminal region BF28_RS11675 PF04025 Domain of unknown function (DUF370) BF28_RS11680 PF00625 Guanylate kinase BF28_RS11685 PF01192 RNA polymerase Rpb6 BF28_RS11690 PF04127 DNA / pantothenate metabolism flavoprotein BF28_RS11690 PF02441 Flavoprotein BF28_RS11695 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BF28_RS11695 PF17764 3′ DNA-binding domain (3′BD) BF28_RS11695 PF00271 Helicase conserved C-terminal domain BF28_RS11695 PF04851 Type III restriction enzyme, res subunit BF28_RS11695 PF18074 Primosomal protein N C-terminal domain BF28_RS11700 PF01327 Polypeptide deformylase BF28_RS11705 PF02911 Formyl transferase, C-terminal domain BF28_RS11705 PF00551 Formyl transferase BF28_RS11710 PF01029 NusB family BF28_RS11710 PF01189 16S rRNA methyltransferase RsmB/F BF28_RS11715 PF04055 Radical SAM superfamily BF28_RS11725 PF03793 PASTA domain BF28_RS11725 PF00069 Protein kinase domain BF28_RS11730 PF16745 RsgA N-terminal domain BF28_RS11730 PF03193 RsgA GTPase BF28_RS11735 PF00834 Ribulose-phosphate 3 epimerase family BF28_RS11740 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BF28_RS11740 PF04263 Thiamin pyrophosphokinase, catalytic domain BF28_RS11745 PF08183 Stage V sporulation protein family BF28_RS11750 PF00830 Ribosomal L28 family BF28_RS11755 PF03780 Asp23 family, cell envelope-related function BF28_RS11760 PF13684 Dihydroxyacetone kinase family BF28_RS11760 PF02734 DAK2 domain BF28_RS11765 PF00270 DEAD/DEAH box helicase BF28_RS11765 PF00271 Helicase conserved C-terminal domain BF28_RS11765 PF17191 RecG wedge domain BF28_RS11770 PF03061 Thioesterase superfamily BF28_RS11775 PF02504 Fatty acid synthesis protein BF28_RS11780 PF00698 Acyl transferase domain BF28_RS11790 PF00550 Phosphopantetheine attachment site BF28_RS11795 PF14622 Ribonuclease-III-like BF28_RS11795 PF00035 Double-stranded RNA binding motif BF28_RS11800 PF02463 RecF/RecN/SMC N terminal domain BF28_RS11800 PF06470 SMC proteins Flexible Hinge Domain BF28_RS11805 PF00448 SRP54-type protein, GTPase domain BF28_RS11805 PF02881 SRP54-type protein, helical bundle domain BF28_RS11810 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BF28_RS11815 PF00448 SRP54-type protein, GTPase domain BF28_RS11815 PF02978 Signal peptide binding domain BF28_RS11815 PF02881 SRP54-type protein, helical bundle domain BF28_RS11820 PF00886 Ribosomal protein S16 BF28_RS11830 PF01782 RimM N-terminal domain BF28_RS11830 PF05239 PRC-barrel domain BF28_RS11835 PF01746 tRNA (Guanine-1)-methyltransferase BF28_RS11840 PF01245 Ribosomal protein L19 BF28_RS11845 PF10502 Signal peptidase, peptidase S26 BF28_RS11850 PF01926 50S ribosome-binding GTPase BF28_RS11855 PF01351 Ribonuclease HII BF28_RS11860 PF08442 ATP-grasp domain BF28_RS11860 PF00549 CoA-ligase BF28_RS11865 PF02629 CoA binding domain BF28_RS11865 PF00549 CoA-ligase BF28_RS11870 PF02481 DNA recombination-mediator protein A BF28_RS11875 PF01396 Topoisomerase DNA binding C4 zinc finger BF28_RS11875 PF01751 Toprim domain BF28_RS11875 PF01131 DNA topoisomerase BF28_RS11880 PF01134 Glucose inhibited division protein A BF28_RS11885 PF00589 Phage integrase family BF28_RS11885 PF02899 Phage integrase, N-terminal SAM-like domain BF28_RS11890 PF00227 Proteasome subunit BF28_RS11895 PF00004 ATPase family associated with various cellular activities (AAA) BF28_RS11895 PF10431 C-terminal, D2-small domain, of ClpB protein BF28_RS11895 PF07724 AAA domain (Cdc48 subfamily) BF28_RS11900 PF06018 CodY GAF-like domain BF28_RS11900 PF08222 CodY helix-turn-helix domain BF28_RS11905 PF00318 Ribosomal protein S2 BF28_RS11910 PF00889 Elongation factor TS BF28_RS11915 PF00696 Amino acid kinase family BF28_RS11920 PF01765 Ribosome recycling factor BF28_RS11925 PF01255 Putative undecaprenyl diphosphate synthase BF28_RS11935 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF28_RS11935 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF28_RS11935 PF13288 DXP reductoisomerase C-terminal domain BF28_RS11940 PF02163 Peptidase family M50 BF28_RS11940 PF17820 PDZ domain BF28_RS11945 PF04073 Aminoacyl-tRNA editing domain BF28_RS11945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF28_RS11945 PF03129 Anticodon binding domain BF28_RS11950 PF00929 Exonuclease BF28_RS11950 PF02811 PHP domain BF28_RS11950 PF14579 Helix-hairpin-helix motif BF28_RS11950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF28_RS11950 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF28_RS11950 PF11490 DNA polymerase III polC-type N-terminus II BF28_RS11950 PF14480 DNA polymerase III polC-type N-terminus I BF28_RS11955 PF02576 RimP N-terminal domain BF28_RS11955 PF17384 RimP C-terminal SH3 domain BF28_RS11960 PF13184 NusA-like KH domain BF28_RS11960 PF08529 NusA N-terminal domain BF28_RS11960 PF00575 S1 RNA binding domain BF28_RS11965 PF04296 Protein of unknown function (DUF448) BF28_RS11970 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BF28_RS11975 PF04760 Translation initiation factor IF-2, N-terminal region BF28_RS11975 PF11987 Translation-initiation factor 2 BF28_RS11975 PF00009 Elongation factor Tu GTP binding domain BF28_RS11980 PF04456 Protein of unknown function (DUF503) BF28_RS11985 PF02033 Ribosome-binding factor A BF28_RS11990 PF16198 tRNA pseudouridylate synthase B C-terminal domain BF28_RS11990 PF01509 TruB family pseudouridylate synthase (N terminal domain) BF28_RS11995 PF06574 FAD synthetase BF28_RS11995 PF01687 Riboflavin kinase BF28_RS12000 PF00312 Ribosomal protein S15 BF28_RS12005 PF00013 KH domain BF28_RS12005 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BF28_RS12005 PF01138 3' exoribonuclease family, domain 1 BF28_RS12005 PF03725 3' exoribonuclease family, domain 2 BF28_RS12005 PF00575 S1 RNA binding domain BF28_RS12010 PF01522 Polysaccharide deacetylase BF28_RS12015 PF05193 Peptidase M16 inactive domain BF28_RS12015 PF00675 Insulinase (Peptidase family M16) BF28_RS12020 PF05239 PRC-barrel domain BF28_RS12025 PF16924 Dipicolinate synthase subunit A N-terminal domain BF28_RS12025 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF28_RS12030 PF02441 Flavoprotein BF28_RS12035 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF28_RS12035 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF28_RS12040 PF13840 ACT domain BF28_RS12040 PF00696 Amino acid kinase family BF28_RS12045 PF00701 Dihydrodipicolinate synthetase family BF28_RS12055 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF28_RS12055 PF17770 Ribonuclease J C-terminal domain BF28_RS12055 PF00753 Metallo-beta-lactamase superfamily BF28_RS12060 PF00574 Clp protease BF28_RS12065 PF14035 YlzJ-like protein BF28_RS12070 PF01580 FtsK/SpoIIIE family BF28_RS12070 PF17854 FtsK alpha domain BF28_RS12070 PF09397 Ftsk gamma domain BF28_RS12075 PF00392 Bacterial regulatory proteins, gntR family BF28_RS12075 PF07702 UTRA domain BF28_RS12080 PF02608 ABC transporter substrate-binding protein PnrA-like BF28_RS12085 PF00005 ABC transporter BF28_RS12090 PF02653 Branched-chain amino acid transport system / permease component BF28_RS12095 PF02653 Branched-chain amino acid transport system / permease component BF28_RS12100 PF05193 Peptidase M16 inactive domain BF28_RS12105 PF00675 Insulinase (Peptidase family M16) BF28_RS12105 PF05193 Peptidase M16 inactive domain BF28_RS12115 PF11588 Protein of unknown function (DUF3243) BF28_RS12120 PF11868 Protein of unknown function (DUF3388) BF28_RS12125 PF13464 Domain of unknown function (DUF4115) BF28_RS12130 PF01066 CDP-alcohol phosphatidyltransferase BF28_RS12135 PF00994 Probable molybdopterin binding domain BF28_RS12135 PF02464 Competence-damaged protein BF28_RS12135 PF18146 Damage-inducible protein CinA KH domain BF28_RS12140 PF00154 recA bacterial DNA recombination protein BF28_RS12150 PF00013 KH domain BF28_RS12150 PF01966 HD domain BF28_RS12150 PF12072 Domain of unknown function (DUF3552) BF28_RS12155 PF13277 YmdB-like protein BF28_RS12160 PF04232 Stage V sporulation protein S (SpoVS) BF28_RS12165 PF01244 Membrane dipeptidase (Peptidase family M19) BF28_RS12170 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BF28_RS12170 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BF28_RS12170 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BF28_RS12175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF28_RS12180 PF01938 TRAM domain BF28_RS12180 PF04055 Radical SAM superfamily BF28_RS12180 PF00919 Uncharacterized protein family UPF0004 BF28_RS12185 PF06133 Control of competence regulator ComK, YlbF/YmcA BF28_RS12190 PF10628 Outer spore coat protein E (CotE) BF28_RS12195 PF05188 MutS domain II BF28_RS12195 PF05192 MutS domain III BF28_RS12195 PF01624 MutS domain I BF28_RS12195 PF05190 MutS family domain IV BF28_RS12195 PF00488 MutS domain V BF28_RS12200 PF08676 MutL C terminal dimerisation domain BF28_RS12200 PF01119 DNA mismatch repair protein, C-terminal domain BF28_RS12215 PF07690 Major Facilitator Superfamily BF28_RS12220 PF02911 Formyl transferase, C-terminal domain BF28_RS12220 PF00551 Formyl transferase BF28_RS12250 PF00350 Dynamin family BF28_RS12255 PF00884 Sulfatase BF28_RS12260 PF03275 UDP-galactopyranose mutase BF28_RS12265 PF07486 Cell Wall Hydrolase BF28_RS12270 PF00082 Subtilase family BF28_RS12275 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BF28_RS12285 PF00155 Aminotransferase class I and II BF28_RS12285 PF00392 Bacterial regulatory proteins, gntR family BF28_RS12290 PF03788 LrgA family BF28_RS12295 PF10787 Uncharacterised protein from bacillus cereus group BF28_RS12310 PF00563 EAL domain BF28_RS12310 PF00990 Diguanylate cyclase, GGDEF domain BF28_RS12310 PF03707 Bacterial signalling protein N terminal repeat BF28_RS12315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS12340 PF01546 Peptidase family M20/M25/M40 BF28_RS12340 PF07687 Peptidase dimerisation domain BF28_RS12345 PF00730 HhH-GPD superfamily base excision DNA repair protein BF28_RS12345 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BF28_RS12350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF28_RS12350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF28_RS12355 PF02805 Metal binding domain of Ada BF28_RS12355 PF12833 Helix-turn-helix domain BF28_RS12360 PF03372 Endonuclease/Exonuclease/phosphatase family BF28_RS12365 PF01497 Periplasmic binding protein BF28_RS12370 PF01032 FecCD transport family BF28_RS12375 PF01032 FecCD transport family BF28_RS12380 PF00005 ABC transporter BF28_RS12385 PF00756 Putative esterase BF28_RS12395 PF02583 Metal-sensitive transcriptional repressor BF28_RS12400 PF00403 Heavy-metal-associated domain BF28_RS12405 PF00403 Heavy-metal-associated domain BF28_RS12410 PF00216 Bacterial DNA-binding protein BF28_RS12415 PF01226 Formate/nitrite transporter BF28_RS12420 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF28_RS12420 PF00149 Calcineurin-like phosphoesterase BF28_RS12425 PF00704 Glycosyl hydrolases family 18 BF28_RS12425 PF00041 Fibronectin type III domain BF28_RS12430 PF00324 Amino acid permease BF28_RS12445 PF04238 Protein of unknown function (DUF420) BF28_RS12450 PF00465 Iron-containing alcohol dehydrogenase BF28_RS12455 PF00455 DeoR C terminal sensor domain BF28_RS12455 PF08220 DeoR-like helix-turn-helix domain BF28_RS12460 PF00294 pfkB family carbohydrate kinase BF28_RS12465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF28_RS12465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF28_RS12470 PF01476 LysM domain BF28_RS12470 PF06725 3D domain BF28_RS12485 PF17209 Hfq protein BF28_RS12500 PF00004 ATPase family associated with various cellular activities (AAA) BF28_RS12500 PF17866 AAA lid domain BF28_RS12510 PF03458 UPF0126 domain BF28_RS12515 PF13167 GTP-binding GTPase N-terminal BF28_RS12515 PF16360 GTP-binding GTPase Middle Region BF28_RS12515 PF01926 50S ribosome-binding GTPase BF28_RS12520 PF06838 Methionine gamma-lyase BF28_RS12525 PF13411 MerR HTH family regulatory protein BF28_RS12530 PF00120 Glutamine synthetase, catalytic domain BF28_RS12530 PF03951 Glutamine synthetase, beta-Grasp domain BF28_RS12535 PF02899 Phage integrase, N-terminal SAM-like domain BF28_RS12535 PF00589 Phage integrase family BF28_RS12660 PF08281 Sigma-70, region 4 BF28_RS12820 PF13457 GW (Gly-Tryp) dipeptide domain BF28_RS12820 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BF28_RS12830 PF00005 ABC transporter BF28_RS12850 PF18593 CdiI immunity protein BF28_RS12860 PF03551 Transcriptional regulator PadR-like family BF28_RS12875 PF01726 LexA DNA binding domain BF28_RS12875 PF00717 Peptidase S24-like BF28_RS12880 PF00239 Resolvase, N terminal domain BF28_RS12885 PF05979 Bacterial protein of unknown function (DUF896) BF28_RS12890 PF00149 Calcineurin-like phosphoesterase BF28_RS12890 PF02872 5'-nucleotidase, C-terminal domain BF28_RS12900 PF00005 ABC transporter BF28_RS12905 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS12910 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS12915 PF02779 Transketolase, pyrimidine binding domain BF28_RS12915 PF00456 Transketolase, thiamine diphosphate binding domain BF28_RS12915 PF02780 Transketolase, C-terminal domain BF28_RS12920 PF10747 Sporulation inhibitor of replication protein SirA BF28_RS12925 PF03672 Uncharacterised protein family (UPF0154) BF28_RS12930 PF00005 ABC transporter BF28_RS12930 PF00664 ABC transporter transmembrane region BF28_RS12935 PF00664 ABC transporter transmembrane region BF28_RS12935 PF00005 ABC transporter BF28_RS12960 PF01925 Sulfite exporter TauE/SafE BF28_RS12970 PF00293 NUDIX domain BF28_RS12970 PF13344 Haloacid dehalogenase-like hydrolase BF28_RS12975 PF04172 LrgB-like family BF28_RS12980 PF03788 LrgA family BF28_RS12985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS12985 PF03466 LysR substrate binding domain BF28_RS12995 PF00005 ABC transporter BF28_RS13015 PF02683 Cytochrome C biogenesis protein transmembrane region BF28_RS13020 PF07301 Protein of unknown function (DUF1453) BF28_RS13040 PF11084 Protein of unknown function (DUF2621) BF28_RS13065 PF08241 Methyltransferase domain BF28_RS13070 PF09021 HutP BF28_RS13075 PF00221 Aromatic amino acid lyase BF28_RS13080 PF17391 Urocanase N-terminal domain BF28_RS13080 PF01175 Urocanase Rossmann-like domain BF28_RS13080 PF17392 Urocanase C-terminal domain BF28_RS13085 PF01979 Amidohydrolase family BF28_RS13090 PF00491 Arginase family BF28_RS13095 PF02559 CarD-like/TRCF domain BF28_RS13100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF28_RS13105 PF01645 Conserved region in glutamate synthase BF28_RS13110 PF00474 Sodium:solute symporter family BF28_RS13115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS13120 PF01738 Dienelactone hydrolase family BF28_RS13125 PF13426 PAS domain BF28_RS13125 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS13125 PF13188 PAS domain BF28_RS13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS13125 PF00989 PAS fold BF28_RS13135 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS13135 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF28_RS13165 PF05532 CsbD-like BF28_RS13180 PF00501 AMP-binding enzyme BF28_RS13180 PF13193 AMP-binding enzyme C-terminal domain BF28_RS13185 PF02632 BioY family BF28_RS13190 PF00501 AMP-binding enzyme BF28_RS13190 PF13193 AMP-binding enzyme C-terminal domain BF28_RS13195 PF02803 Thiolase, C-terminal domain BF28_RS13195 PF00108 Thiolase, N-terminal domain BF28_RS13205 PF13344 Haloacid dehalogenase-like hydrolase BF28_RS13205 PF00293 NUDIX domain BF28_RS13210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF28_RS13210 PF01411 tRNA synthetases class II (A) BF28_RS13210 PF02272 DHHA1 domain BF28_RS13220 PF07690 Major Facilitator Superfamily BF28_RS13230 PF08179 Small acid-soluble spore protein P family BF28_RS13240 PF01522 Polysaccharide deacetylase BF28_RS13250 PF00694 Aconitase C-terminal domain BF28_RS13250 PF00330 Aconitase family (aconitate hydratase) BF28_RS13255 PF00005 ABC transporter BF28_RS13255 PF00664 ABC transporter transmembrane region BF28_RS13265 PF00578 AhpC/TSA family BF28_RS13270 PF01336 OB-fold nucleic acid binding domain BF28_RS13270 PF00929 Exonuclease BF28_RS13270 PF14579 Helix-hairpin-helix motif BF28_RS13270 PF02811 PHP domain BF28_RS13270 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF28_RS13270 PF11490 DNA polymerase III polC-type N-terminus II BF28_RS13270 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF28_RS13275 PF13040 Fur-regulated basic protein B BF28_RS13280 PF08177 Small acid-soluble spore protein N family BF28_RS13290 PF00704 Glycosyl hydrolases family 18 BF28_RS13290 PF01476 LysM domain BF28_RS13295 PF03061 Thioesterase superfamily BF28_RS13300 PF01521 Iron-sulphur cluster biosynthesis BF28_RS13305 PF02660 Glycerol-3-phosphate acyltransferase BF28_RS13310 PF03477 ATP cone domain BF28_RS13310 PF13597 Anaerobic ribonucleoside-triphosphate reductase BF28_RS13315 PF04055 Radical SAM superfamily BF28_RS13320 PF00486 Transcriptional regulatory protein, C terminal BF28_RS13320 PF00072 Response regulator receiver domain BF28_RS13325 PF13180 PDZ domain BF28_RS13330 PF13380 CoA binding domain BF28_RS13340 PF01751 Toprim domain BF28_RS13340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS13340 PF00204 DNA gyrase B BF28_RS13340 PF00986 DNA gyrase B subunit, carboxyl terminus BF28_RS13345 PF03989 DNA gyrase C-terminal domain, beta-propeller BF28_RS13345 PF00521 DNA gyrase/topoisomerase IV, subunit A BF28_RS13350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF28_RS13350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF28_RS13360 PF13732 Domain of unknown function (DUF4162) BF28_RS13360 PF00005 ABC transporter BF28_RS13375 PF04542 Sigma-70 region 2 BF28_RS13375 PF08281 Sigma-70, region 4 BF28_RS13385 PF03816 Cell envelope-related transcriptional attenuator domain BF28_RS13390 PF00375 Sodium:dicarboxylate symporter family BF28_RS13395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS13400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS13405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS13410 PF08241 Methyltransferase domain BF28_RS13455 PF03323 Bacillus/Clostridium GerA spore germination protein BF28_RS13465 PF00037 4Fe-4S binding domain BF28_RS13465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF28_RS13465 PF00384 Molybdopterin oxidoreductase BF28_RS13465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF28_RS13465 PF01568 Molydopterin dinucleotide binding domain BF28_RS13470 PF07849 Protein of unknown function (DUF1641) BF28_RS13475 PF10057 Uncharacterized conserved protein (DUF2294) BF28_RS13480 PF02634 FdhD/NarQ family BF28_RS13485 PF06463 Molybdenum Cofactor Synthesis C BF28_RS13485 PF04055 Radical SAM superfamily BF28_RS13490 PF01226 Formate/nitrite transporter BF28_RS13495 PF00899 ThiF family BF28_RS13500 PF03453 MoeA N-terminal region (domain I and II) BF28_RS13500 PF03454 MoeA C-terminal region (domain IV) BF28_RS13500 PF00994 Probable molybdopterin binding domain BF28_RS13505 PF02391 MoaE protein BF28_RS13515 PF10609 NUBPL iron-transfer P-loop NTPase BF28_RS13530 PF06961 Protein of unknown function (DUF1294) BF28_RS13535 PF00892 EamA-like transporter family BF28_RS13540 PF02681 Divergent PAP2 family BF28_RS13545 PF13249 Squalene-hopene cyclase N-terminal domain BF28_RS13545 PF13243 Squalene-hopene cyclase C-terminal domain BF28_RS13550 PF14151 YfhD-like protein BF28_RS13560 PF00171 Aldehyde dehydrogenase family BF28_RS13570 PF00474 Sodium:solute symporter family BF28_RS13575 PF01156 Inosine-uridine preferring nucleoside hydrolase BF28_RS13585 PF00206 Lyase BF28_RS13585 PF14698 Argininosuccinate lyase C-terminal BF28_RS13595 PF00106 short chain dehydrogenase BF28_RS13605 PF00132 Bacterial transferase hexapeptide (six repeats) BF28_RS13615 PF00293 NUDIX domain BF28_RS13625 PF00258 Flavodoxin BF28_RS13635 PF00313 'Cold-shock' DNA-binding domain BF28_RS13655 PF13037 Domain of unknown function (DUF3898) BF28_RS13655 PF13039 Protein of unknown function (DUF3900) BF28_RS13665 PF04294 VanW like protein BF28_RS13670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS13685 PF02308 MgtC family BF28_RS13690 PF01752 Collagenase BF28_RS13690 PF18496 Collagenase G catalytic helper subdomain BF28_RS13690 PF08453 Peptidase family M9 N-terminal BF28_RS13695 PF00378 Enoyl-CoA hydratase/isomerase BF28_RS13700 PF00535 Glycosyl transferase family 2 BF28_RS13705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF28_RS13710 PF00132 Bacterial transferase hexapeptide (six repeats) BF28_RS13735 PF02913 FAD linked oxidases, C-terminal domain BF28_RS13735 PF01565 FAD binding domain BF28_RS13740 PF01758 Sodium Bile acid symporter family BF28_RS13755 PF04299 Putative FMN-binding domain BF28_RS13765 PF18801 response regulator aspartate phosphatase H, N terminal BF28_RS13770 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BF28_RS13775 PF00107 Zinc-binding dehydrogenase BF28_RS13775 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS13780 PF01022 Bacterial regulatory protein, arsR family BF28_RS13785 PF01494 FAD binding domain BF28_RS13805 PF03009 Glycerophosphoryl diester phosphodiesterase family BF28_RS13820 PF03466 LysR substrate binding domain BF28_RS13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS13825 PF07690 Major Facilitator Superfamily BF28_RS13840 PF00144 Beta-lactamase BF28_RS13845 PF08439 Oligopeptidase F BF28_RS13845 PF01432 Peptidase family M3 BF28_RS13850 PF00797 N-acetyltransferase BF28_RS13855 PF00488 MutS domain V BF28_RS13855 PF01713 Smr domain BF28_RS13880 PF00107 Zinc-binding dehydrogenase BF28_RS13880 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS13885 PF03466 LysR substrate binding domain BF28_RS13885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS13895 PF10901 Protein of unknown function (DUF2690) BF28_RS13915 PF13170 Protein of unknown function (DUF4003) BF28_RS13920 PF02567 Phenazine biosynthesis-like protein BF28_RS13925 PF05675 Protein of unknown function (DUF817) BF28_RS13930 PF01032 FecCD transport family BF28_RS13935 PF01032 FecCD transport family BF28_RS13940 PF01497 Periplasmic binding protein BF28_RS13955 PF03600 Citrate transporter BF28_RS13960 PF08830 Protein of unknown function (DUF1806) BF28_RS13965 PF02585 GlcNAc-PI de-N-acetylase BF28_RS13995 PF07690 Major Facilitator Superfamily BF28_RS14000 PF00324 Amino acid permease BF28_RS14005 PF00107 Zinc-binding dehydrogenase BF28_RS14005 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS14010 PF00753 Metallo-beta-lactamase superfamily BF28_RS14025 PF07726 ATPase family associated with various cellular activities (AAA) BF28_RS14025 PF17863 AAA lid domain BF28_RS14075 PF00144 Beta-lactamase BF28_RS14115 PF03063 Prismane/CO dehydrogenase family BF28_RS14130 PF00005 ABC transporter BF28_RS14130 PF13732 Domain of unknown function (DUF4162) BF28_RS14135 PF01061 ABC-2 type transporter BF28_RS14140 PF05656 Protein of unknown function (DUF805) BF28_RS14180 PF00440 Bacterial regulatory proteins, tetR family BF28_RS14190 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BF28_RS14190 PF00535 Glycosyl transferase family 2 BF28_RS14195 PF04542 Sigma-70 region 2 BF28_RS14200 PF12791 Anti-sigma factor N-terminus BF28_RS14205 PF01522 Polysaccharide deacetylase BF28_RS14210 PF01022 Bacterial regulatory protein, arsR family BF28_RS14225 PF01494 FAD binding domain BF28_RS14230 PF01638 HxlR-like helix-turn-helix BF28_RS14235 PF02525 Flavodoxin-like fold BF28_RS14240 PF00501 AMP-binding enzyme BF28_RS14240 PF13193 AMP-binding enzyme C-terminal domain BF28_RS14245 PF13302 Acetyltransferase (GNAT) domain BF28_RS14260 PF02567 Phenazine biosynthesis-like protein BF28_RS14295 PF00248 Aldo/keto reductase family BF28_RS14300 PF01638 HxlR-like helix-turn-helix BF28_RS14305 PF01638 HxlR-like helix-turn-helix BF28_RS14315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF28_RS14315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF28_RS14320 PF00392 Bacterial regulatory proteins, gntR family BF28_RS14320 PF07702 UTRA domain BF28_RS14325 PF01638 HxlR-like helix-turn-helix BF28_RS14335 PF03960 ArsC family BF28_RS14365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS14370 PF03928 Haem-degrading BF28_RS14380 PF07690 Major Facilitator Superfamily BF28_RS14385 PF00248 Aldo/keto reductase family BF28_RS14400 PF01638 HxlR-like helix-turn-helix BF28_RS14405 PF00925 GTP cyclohydrolase II BF28_RS14405 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BF28_RS14410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF28_RS14410 PF01872 RibD C-terminal domain BF28_RS14415 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) BF28_RS14425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS14425 PF00672 HAMP domain BF28_RS14425 PF12729 Four helix bundle sensory module for signal transduction BF28_RS14435 PF03413 Peptidase propeptide and YPEB domain BF28_RS14435 PF07504 Fungalysin/Thermolysin Propeptide Motif BF28_RS14435 PF01447 Thermolysin metallopeptidase, catalytic domain BF28_RS14435 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF28_RS14440 PF00106 short chain dehydrogenase BF28_RS14450 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS14450 PF14765 Polyketide synthase dehydratase BF28_RS14450 PF02801 Beta-ketoacyl synthase, C-terminal domain BF28_RS14450 PF00550 Phosphopantetheine attachment site BF28_RS14450 PF08659 KR domain BF28_RS14450 PF00107 Zinc-binding dehydrogenase BF28_RS14450 PF00698 Acyl transferase domain BF28_RS14450 PF00109 Beta-ketoacyl synthase, N-terminal domain BF28_RS14450 PF16197 Ketoacyl-synthetase C-terminal extension BF28_RS14460 PF00296 Luciferase-like monooxygenase BF28_RS14465 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS14465 PF00107 Zinc-binding dehydrogenase BF28_RS14470 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BF28_RS14470 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BF28_RS14475 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BF28_RS14475 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BF28_RS14480 PF02779 Transketolase, pyrimidine binding domain BF28_RS14480 PF02780 Transketolase, C-terminal domain BF28_RS14480 PF00456 Transketolase, thiamine diphosphate binding domain BF28_RS14485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF28_RS14485 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF28_RS14490 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF28_RS14495 PF02447 GntP family permease BF28_RS14500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF28_RS14500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF28_RS14505 PF10282 Lactonase, 7-bladed beta-propeller BF28_RS14510 PF06906 Protein of unknown function (DUF1272) BF28_RS14515 PF00805 Pentapeptide repeats (8 copies) BF28_RS14520 PF00892 EamA-like transporter family BF28_RS14535 PF01370 NAD dependent epimerase/dehydratase family BF28_RS14540 PF08421 Putative zinc binding domain BF28_RS14540 PF08484 C-methyltransferase C-terminal domain BF28_RS14545 PF16363 GDP-mannose 4,6 dehydratase BF28_RS14550 PF00483 Nucleotidyl transferase BF28_RS14560 PF13411 MerR HTH family regulatory protein BF28_RS14565 PF00571 CBS domain BF28_RS14565 PF03471 Transporter associated domain BF28_RS14565 PF01595 Cyclin M transmembrane N-terminal domain BF28_RS14575 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS14595 PF07690 Major Facilitator Superfamily BF28_RS14605 PF08241 Methyltransferase domain BF28_RS14625 PF01594 AI-2E family transporter BF28_RS14630 PF13288 DXP reductoisomerase C-terminal domain BF28_RS14630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF28_RS14630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF28_RS14635 PF00579 tRNA synthetases class I (W and Y) BF28_RS14640 PF12704 MacB-like periplasmic core domain BF28_RS14640 PF02687 FtsX-like permease family BF28_RS14640 PF00005 ABC transporter BF28_RS14650 PF12464 Maltose acetyltransferase BF28_RS14650 PF14602 Hexapeptide repeat of succinyl-transferase BF28_RS14660 PF00480 ROK family BF28_RS14665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS14675 PF00293 NUDIX domain BF28_RS14675 PF13344 Haloacid dehalogenase-like hydrolase BF28_RS14695 PF13350 Tyrosine phosphatase family BF28_RS14705 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS14730 PF00005 ABC transporter BF28_RS14750 PF00391 PEP-utilising enzyme, mobile domain BF28_RS14750 PF00224 Pyruvate kinase, barrel domain BF28_RS14750 PF02887 Pyruvate kinase, alpha/beta domain BF28_RS14760 PF00881 Nitroreductase family BF28_RS14765 PF01638 HxlR-like helix-turn-helix BF28_RS14780 PF13393 Histidyl-tRNA synthetase BF28_RS14780 PF03129 Anticodon binding domain BF28_RS14785 PF00072 Response regulator receiver domain BF28_RS14785 PF00196 Bacterial regulatory proteins, luxR family BF28_RS14790 PF00144 Beta-lactamase BF28_RS14795 PF04073 Aminoacyl-tRNA editing domain BF28_RS14805 PF01381 Helix-turn-helix BF28_RS14820 PF13411 MerR HTH family regulatory protein BF28_RS14820 PF07739 TipAS antibiotic-recognition domain BF28_RS14845 PF03606 C4-dicarboxylate anaerobic carrier BF28_RS14850 PF03737 Aldolase/RraA BF28_RS14865 PF02361 Cobalt transport protein BF28_RS14870 PF00005 ABC transporter BF28_RS14880 PF14256 YwiC-like protein BF28_RS14900 PF02525 Flavodoxin-like fold BF28_RS14910 PF02667 Short chain fatty acid transporter BF28_RS14920 PF17440 Thiol-activated cytolysin beta sandwich domain BF28_RS14920 PF01289 Thiol-activated cytolysin BF28_RS14930 PF07690 Major Facilitator Superfamily BF28_RS14935 PF01047 MarR family BF28_RS14940 PF12697 Alpha/beta hydrolase family BF28_RS14945 PF07690 Major Facilitator Superfamily BF28_RS14950 PF14044 NETI protein BF28_RS14985 PF07690 Major Facilitator Superfamily BF28_RS14990 PF08361 MAATS-type transcriptional repressor, C-terminal region BF28_RS14990 PF00440 Bacterial regulatory proteins, tetR family BF28_RS15000 PF01510 N-acetylmuramoyl-L-alanine amidase BF28_RS15000 PF01476 LysM domain BF28_RS15000 PF01471 Putative peptidoglycan binding domain BF28_RS15010 PF01804 Penicillin amidase BF28_RS15015 PF14436 Bacterial EndoU nuclease BF28_RS15015 PF04740 LXG domain of WXG superfamily BF28_RS15030 PF12833 Helix-turn-helix domain BF28_RS15030 PF01497 Periplasmic binding protein BF28_RS15040 PF07883 Cupin domain BF28_RS15055 PF04542 Sigma-70 region 2 BF28_RS15055 PF08281 Sigma-70, region 4 BF28_RS15070 PF00266 Aminotransferase class-V BF28_RS15075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF28_RS15075 PF01842 ACT domain BF28_RS15075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF28_RS15090 PF17676 LD-carboxypeptidase C-terminal domain BF28_RS15090 PF02016 LD-carboxypeptidase N-terminal domain BF28_RS15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS15115 PF03466 LysR substrate binding domain BF28_RS15120 PF02754 Cysteine-rich domain BF28_RS15125 PF11870 Domain of unknown function (DUF3390) BF28_RS15125 PF13183 4Fe-4S dicluster domain BF28_RS15125 PF02589 LUD domain BF28_RS15130 PF02589 LUD domain BF28_RS15135 PF07690 Major Facilitator Superfamily BF28_RS15140 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF28_RS15140 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS15145 PF04299 Putative FMN-binding domain BF28_RS15150 PF00583 Acetyltransferase (GNAT) family BF28_RS15155 PF01047 MarR family BF28_RS15165 PF00486 Transcriptional regulatory protein, C terminal BF28_RS15165 PF00072 Response regulator receiver domain BF28_RS15170 PF00672 HAMP domain BF28_RS15170 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS15170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS15190 PF02687 FtsX-like permease family BF28_RS15195 PF00005 ABC transporter BF28_RS15210 PF04072 Leucine carboxyl methyltransferase BF28_RS15215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF28_RS15215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF28_RS15225 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BF28_RS15230 PF00753 Metallo-beta-lactamase superfamily BF28_RS15245 PF01381 Helix-turn-helix BF28_RS15255 PF00144 Beta-lactamase BF28_RS15265 PF00291 Pyridoxal-phosphate dependent enzyme BF28_RS15295 PF01810 LysE type translocator BF28_RS15315 PF07690 Major Facilitator Superfamily BF28_RS15320 PF00258 Flavodoxin BF28_RS15320 PF00067 Cytochrome P450 BF28_RS15320 PF00175 Oxidoreductase NAD-binding domain BF28_RS15320 PF00667 FAD binding domain BF28_RS15325 PF12802 MarR family BF28_RS15345 PF00144 Beta-lactamase BF28_RS15355 PF02805 Metal binding domain of Ada BF28_RS15355 PF12833 Helix-turn-helix domain BF28_RS15365 PF01609 Transposase DDE domain BF28_RS15375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS15405 PF00012 Hsp70 protein BF28_RS15420 PF01022 Bacterial regulatory protein, arsR family BF28_RS15425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS15430 PF01758 Sodium Bile acid symporter family BF28_RS15435 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF28_RS15450 PF08769 Sporulation initiation factor Spo0A C terminal BF28_RS15450 PF00072 Response regulator receiver domain BF28_RS15460 PF02687 FtsX-like permease family BF28_RS15465 PF00005 ABC transporter BF28_RS15470 PF12996 DUF based on E. rectale Gene description (DUF3880) BF28_RS15475 PF00561 alpha/beta hydrolase fold BF28_RS15500 PF01040 UbiA prenyltransferase family BF28_RS15510 PF13091 PLD-like domain BF28_RS15525 PF02559 CarD-like/TRCF domain BF28_RS15540 PF10842 Protein of unknown function (DUF2642) BF28_RS15555 PF10057 Uncharacterized conserved protein (DUF2294) BF28_RS15560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF28_RS15560 PF00361 Proton-conducting membrane transporter BF28_RS15565 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BF28_RS15585 PF11181 Heat induced stress protein YflT BF28_RS15600 PF01544 CorA-like Mg2+ transporter protein BF28_RS15605 PF00199 Catalase BF28_RS15605 PF06628 Catalase-related immune-responsive BF28_RS15610 PF17936 Bacterial Ig domain BF28_RS15610 PF02872 5'-nucleotidase, C-terminal domain BF28_RS15610 PF00149 Calcineurin-like phosphoesterase BF28_RS15620 PF13520 Amino acid permease BF28_RS15625 PF01554 MatE BF28_RS15630 PF01266 FAD dependent oxidoreductase BF28_RS15630 PF00355 Rieske [2Fe-2S] domain BF28_RS15635 PF00144 Beta-lactamase BF28_RS15650 PF01235 Sodium:alanine symporter family BF28_RS15655 PF04960 Glutaminase BF28_RS15660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS15665 PF08664 YcbB domain BF28_RS15665 PF00072 Response regulator receiver domain BF28_RS15670 PF03323 Bacillus/Clostridium GerA spore germination protein BF28_RS15675 PF03845 Spore germination protein BF28_RS15680 PF05504 Spore germination B3/ GerAC like, C-terminal BF28_RS15685 PF03807 NADP oxidoreductase coenzyme F420-dependent BF28_RS15685 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF28_RS15690 PF13520 Amino acid permease BF28_RS15695 PF08459 UvrC Helix-hairpin-helix N-terminal BF28_RS15695 PF02151 UvrB/uvrC motif BF28_RS15695 PF12826 Helix-hairpin-helix motif BF28_RS15695 PF01541 GIY-YIG catalytic domain BF28_RS15700 PF13333 Integrase core domain BF28_RS15700 PF00665 Integrase core domain BF28_RS15705 PF01381 Helix-turn-helix BF28_RS15710 PF17763 Glutaminase/Asparaginase C-terminal domain BF28_RS15710 PF00710 Asparaginase, N-terminal BF28_RS15715 PF10415 Fumarase C C-terminus BF28_RS15715 PF00206 Lyase BF28_RS15725 PF00005 ABC transporter BF28_RS15740 PF13411 MerR HTH family regulatory protein BF28_RS15740 PF07739 TipAS antibiotic-recognition domain BF28_RS15750 PF13823 Alcohol dehydrogenase GroES-associated BF28_RS15750 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS15750 PF00107 Zinc-binding dehydrogenase BF28_RS15755 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF28_RS15760 PF11553 Protein of unknown function (DUF3231) BF28_RS15765 PF10710 Protein of unknown function (DUF2512) BF28_RS15770 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF28_RS15780 PF00324 Amino acid permease BF28_RS15785 PF01810 LysE type translocator BF28_RS15790 PF08892 YqcI/YcgG family BF28_RS15795 PF07875 Coat F domain BF28_RS15810 PF00753 Metallo-beta-lactamase superfamily BF28_RS15820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BF28_RS15820 PF00391 PEP-utilising enzyme, mobile domain BF28_RS15825 PF00440 Bacterial regulatory proteins, tetR family BF28_RS15840 PF07670 Nucleoside recognition BF28_RS15855 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BF28_RS15855 PF02770 Acyl-CoA dehydrogenase, middle domain BF28_RS15855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF28_RS15870 PF07454 Stage II sporulation protein P (SpoIIP) BF28_RS15880 PF03932 CutC family BF28_RS15885 PF10502 Signal peptidase, peptidase S26 BF28_RS15890 PF09339 IclR helix-turn-helix domain BF28_RS15890 PF01614 Bacterial transcriptional regulator BF28_RS15895 PF02682 Carboxyltransferase domain, subdomain C and D BF28_RS15900 PF02626 Carboxyltransferase domain, subdomain A and B BF28_RS15905 PF03746 LamB/YcsF family BF28_RS15920 PF01470 Pyroglutamyl peptidase BF28_RS15925 PF02146 Sir2 family BF28_RS15935 PF00905 Penicillin binding protein transpeptidase domain BF28_RS15935 PF03717 Penicillin-binding Protein dimerisation domain BF28_RS15940 PF10502 Signal peptidase, peptidase S26 BF28_RS15950 PF00293 NUDIX domain BF28_RS15960 PF09278 MerR, DNA binding BF28_RS15960 PF00376 MerR family regulatory protein BF28_RS15965 PF08713 DNA alkylation repair enzyme BF28_RS15975 PF00324 Amino acid permease BF28_RS15980 PF13302 Acetyltransferase (GNAT) domain BF28_RS15985 PF01925 Sulfite exporter TauE/SafE BF28_RS16015 PF00561 alpha/beta hydrolase fold BF28_RS16020 PF00486 Transcriptional regulatory protein, C terminal BF28_RS16020 PF00072 Response regulator receiver domain BF28_RS16025 PF00672 HAMP domain BF28_RS16025 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS16030 PF13031 Protein of unknown function (DUF3892) BF28_RS16035 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BF28_RS16040 PF00392 Bacterial regulatory proteins, gntR family BF28_RS16040 PF00155 Aminotransferase class I and II BF28_RS16045 PF00892 EamA-like transporter family BF28_RS16060 PF00583 Acetyltransferase (GNAT) family BF28_RS16065 PF12833 Helix-turn-helix domain BF28_RS16090 PF00005 ABC transporter BF28_RS16095 PF16363 GDP-mannose 4,6 dehydratase BF28_RS16100 PF00392 Bacterial regulatory proteins, gntR family BF28_RS16105 PF00005 ABC transporter BF28_RS16120 PF00293 NUDIX domain BF28_RS16130 PF00679 Elongation factor G C-terminus BF28_RS16130 PF14492 Elongation Factor G, domain II BF28_RS16130 PF00009 Elongation factor Tu GTP binding domain BF28_RS16130 PF03764 Elongation factor G, domain IV BF28_RS16135 PF01047 MarR family BF28_RS16140 PF00881 Nitroreductase family BF28_RS16150 PF07726 ATPase family associated with various cellular activities (AAA) BF28_RS16150 PF17863 AAA lid domain BF28_RS16170 PF00144 Beta-lactamase BF28_RS16175 PF01810 LysE type translocator BF28_RS16185 PF13382 Adenine deaminase C-terminal domain BF28_RS16185 PF01979 Amidohydrolase family BF28_RS16190 PF01047 MarR family BF28_RS16205 PF00005 ABC transporter BF28_RS16210 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS16215 PF06628 Catalase-related immune-responsive BF28_RS16215 PF00199 Catalase BF28_RS16220 PF00202 Aminotransferase class-III BF28_RS16230 PF00535 Glycosyl transferase family 2 BF28_RS16240 PF00535 Glycosyl transferase family 2 BF28_RS16255 PF00535 Glycosyl transferase family 2 BF28_RS16265 PF07690 Major Facilitator Superfamily BF28_RS16280 PF07726 ATPase family associated with various cellular activities (AAA) BF28_RS16280 PF17863 AAA lid domain BF28_RS16305 PF12681 Glyoxalase-like domain BF28_RS16310 PF13302 Acetyltransferase (GNAT) domain BF28_RS16330 PF00072 Response regulator receiver domain BF28_RS16330 PF04397 LytTr DNA-binding domain BF28_RS16340 PF10086 YhfC intramembrane metalloprotease BF28_RS16355 PF13443 Cro/C1-type HTH DNA-binding domain BF28_RS16360 PF11188 Protein of unknown function (DUF2975) BF28_RS16365 PF00245 Alkaline phosphatase BF28_RS16370 PF00487 Fatty acid desaturase BF28_RS16375 PF01139 tRNA-splicing ligase RtcB BF28_RS16380 PF00324 Amino acid permease BF28_RS16385 PF01614 Bacterial transcriptional regulator BF28_RS16385 PF09339 IclR helix-turn-helix domain BF28_RS16390 PF01546 Peptidase family M20/M25/M40 BF28_RS16395 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF28_RS16395 PF03807 NADP oxidoreductase coenzyme F420-dependent BF28_RS16400 PF01472 PUA domain BF28_RS16400 PF00696 Amino acid kinase family BF28_RS16405 PF00171 Aldehyde dehydrogenase family BF28_RS16410 PF01773 Na+ dependent nucleoside transporter N-terminus BF28_RS16410 PF07662 Na+ dependent nucleoside transporter C-terminus BF28_RS16430 PF03992 Antibiotic biosynthesis monooxygenase BF28_RS16455 PF01791 DeoC/LacD family aldolase BF28_RS16465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF28_RS16465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF28_RS16470 PF04198 Putative sugar-binding domain BF28_RS16470 PF00325 Bacterial regulatory proteins, crp family BF28_RS16475 PF00005 ABC transporter BF28_RS16480 PF02653 Branched-chain amino acid transport system / permease component BF28_RS16485 PF02653 Branched-chain amino acid transport system / permease component BF28_RS16490 PF13407 Periplasmic binding protein domain BF28_RS16495 PF06039 Malate:quinone oxidoreductase (Mqo) BF28_RS16510 PF00501 AMP-binding enzyme BF28_RS16510 PF13193 AMP-binding enzyme C-terminal domain BF28_RS16515 PF00378 Enoyl-CoA hydratase/isomerase BF28_RS16530 PF06725 3D domain BF28_RS16530 PF01476 LysM domain BF28_RS16545 PF01636 Phosphotransferase enzyme family BF28_RS16565 PF01817 Chorismate mutase type II BF28_RS16565 PF00793 DAHP synthetase I family BF28_RS16570 PF01264 Chorismate synthase BF28_RS16575 PF00155 Aminotransferase class I and II BF28_RS16580 PF01842 ACT domain BF28_RS16580 PF02153 Prephenate dehydrogenase BF28_RS16585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF28_RS16595 PF00440 Bacterial regulatory proteins, tetR family BF28_RS16595 PF16295 Tetracyclin repressor-like, C-terminal domain BF28_RS16600 PF03176 MMPL family BF28_RS16615 PF12848 ABC transporter BF28_RS16615 PF00005 ABC transporter BF28_RS16620 PF00884 Sulfatase BF28_RS16625 PF03741 Integral membrane protein TerC family BF28_RS16630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF28_RS16640 PF03611 PTS system sugar-specific permease component BF28_RS16645 PF01522 Polysaccharide deacetylase BF28_RS16670 PF12867 DinB superfamily BF28_RS16675 PF13536 Putative multidrug resistance efflux transporter BF28_RS16695 PF02522 Aminoglycoside 3-N-acetyltransferase BF28_RS16715 PF13344 Haloacid dehalogenase-like hydrolase BF28_RS16715 PF00293 NUDIX domain BF28_RS16735 PF00005 ABC transporter BF28_RS16740 PF09084 NMT1/THI5 like BF28_RS16745 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS16750 PF00296 Luciferase-like monooxygenase BF28_RS16765 PF01594 AI-2E family transporter BF28_RS16815 PF00005 ABC transporter BF28_RS16835 PF03630 Fumble BF28_RS16840 PF07977 FabA-like domain BF28_RS16845 PF00155 Aminotransferase class I and II BF28_RS16880 PF08241 Methyltransferase domain BF28_RS16890 PF01156 Inosine-uridine preferring nucleoside hydrolase BF28_RS16895 PF04226 Transglycosylase associated protein BF28_RS16915 PF07690 Major Facilitator Superfamily BF28_RS16920 PF12793 Sugar transport-related sRNA regulator N-term BF28_RS16920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS16925 PF13171 Protein of unknown function (DUF4004) BF28_RS16930 PF04519 Polymer-forming cytoskeletal BF28_RS16940 PF07690 Major Facilitator Superfamily BF28_RS16970 PF07552 Spore Coat Protein X and V domain BF28_RS16975 PF02645 Uncharacterised protein, DegV family COG1307 BF28_RS16990 PF01432 Peptidase family M3 BF28_RS16990 PF08439 Oligopeptidase F BF28_RS16995 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF28_RS17005 PF01048 Phosphorylase superfamily BF28_RS17010 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS17030 PF00072 Response regulator receiver domain BF28_RS17030 PF00486 Transcriptional regulatory protein, C terminal BF28_RS17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS17035 PF00989 PAS fold BF28_RS17035 PF16736 Single Cache-like BF28_RS17035 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS17040 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BF28_RS17040 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BF28_RS17065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF28_RS17070 PF01965 DJ-1/PfpI family BF28_RS17085 PF13378 Enolase C-terminal domain-like BF28_RS17085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF28_RS17090 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BF28_RS17090 PF00877 NlpC/P60 family BF28_RS17095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS17100 PF13302 Acetyltransferase (GNAT) domain BF28_RS17100 PF00958 GMP synthase C terminal domain BF28_RS17100 PF00117 Glutamine amidotransferase class-I BF28_RS17100 PF03352 Methyladenine glycosylase BF28_RS17100 PF13673 Acetyltransferase (GNAT) domain BF28_RS17105 PF04914 DltD protein BF28_RS17120 PF09335 SNARE associated Golgi protein BF28_RS17125 PF01966 HD domain BF28_RS17130 PF01636 Phosphotransferase enzyme family BF28_RS17140 PF08876 Domain of unknown function (DUF1836) BF28_RS17155 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS17155 PF04324 BFD-like [2Fe-2S] binding domain BF28_RS17165 PF04324 BFD-like [2Fe-2S] binding domain BF28_RS17165 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS17170 PF00158 Sigma-54 interaction domain BF28_RS17170 PF13188 PAS domain BF28_RS17170 PF02954 Bacterial regulatory protein, Fis family BF28_RS17175 PF01266 FAD dependent oxidoreductase BF28_RS17180 PF05544 Proline racemase BF28_RS17185 PF05544 Proline racemase BF28_RS17190 PF00701 Dihydrodipicolinate synthetase family BF28_RS17195 PF00171 Aldehyde dehydrogenase family BF28_RS17200 PF01235 Sodium:alanine symporter family BF28_RS17205 PF02627 Carboxymuconolactone decarboxylase family BF28_RS17215 PF18416 N-acetylglucosamine binding protein domain 2 BF28_RS17215 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF28_RS17220 PF02833 DHHA2 domain BF28_RS17220 PF01368 DHH family BF28_RS17265 PF00570 HRDC domain BF28_RS17265 PF00270 DEAD/DEAH box helicase BF28_RS17265 PF00271 Helicase conserved C-terminal domain BF28_RS17265 PF09382 RQC domain BF28_RS17265 PF16124 RecQ zinc-binding BF28_RS17270 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BF28_RS17285 PF13538 UvrD-like helicase C-terminal domain BF28_RS17330 PF00753 Metallo-beta-lactamase superfamily BF28_RS17330 PF13567 Domain of unknown function (DUF4131) BF28_RS17330 PF03772 Competence protein BF28_RS17340 PF04237 YjbR BF28_RS17345 PF08241 Methyltransferase domain BF28_RS17350 PF10990 Protein of unknown function (DUF2809) BF28_RS17365 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF28_RS17365 PF18416 N-acetylglucosamine binding protein domain 2 BF28_RS17370 PF13673 Acetyltransferase (GNAT) domain BF28_RS17375 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BF28_RS17390 PF00574 Clp protease BF28_RS17395 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BF28_RS17400 PF00005 ABC transporter BF28_RS17400 PF00571 CBS domain BF28_RS17405 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS17430 PF00293 NUDIX domain BF28_RS17440 PF00485 Phosphoribulokinase / Uridine kinase family BF28_RS17445 PF13673 Acetyltransferase (GNAT) domain BF28_RS17445 PF04229 GrpB protein BF28_RS17450 PF00106 short chain dehydrogenase BF28_RS17460 PF00676 Dehydrogenase E1 component BF28_RS17465 PF02780 Transketolase, C-terminal domain BF28_RS17465 PF02779 Transketolase, pyrimidine binding domain BF28_RS17470 PF02817 e3 binding domain BF28_RS17470 PF00364 Biotin-requiring enzyme BF28_RS17470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF28_RS17475 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS17475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF28_RS17495 PF08220 DeoR-like helix-turn-helix domain BF28_RS17495 PF00455 DeoR C terminal sensor domain BF28_RS17515 PF02954 Bacterial regulatory protein, Fis family BF28_RS17515 PF01590 GAF domain BF28_RS17515 PF00158 Sigma-54 interaction domain BF28_RS17540 PF13344 Haloacid dehalogenase-like hydrolase BF28_RS17540 PF00293 NUDIX domain BF28_RS17545 PF08359 YsiA-like protein, C-terminal region BF28_RS17545 PF00440 Bacterial regulatory proteins, tetR family BF28_RS17550 PF00266 Aminotransferase class-V BF28_RS17555 PF04199 Putative cyclase BF28_RS17560 PF03301 Tryptophan 2,3-dioxygenase BF28_RS17575 PF01471 Putative peptidoglycan binding domain BF28_RS17575 PF07486 Cell Wall Hydrolase BF28_RS17580 PF14620 YpeB sporulation BF28_RS17580 PF03413 Peptidase propeptide and YPEB domain BF28_RS17585 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BF28_RS17600 PF06081 Aromatic acid exporter family member 1 BF28_RS17625 PF00561 alpha/beta hydrolase fold BF28_RS17630 PF00392 Bacterial regulatory proteins, gntR family BF28_RS17630 PF00155 Aminotransferase class I and II BF28_RS17635 PF00892 EamA-like transporter family BF28_RS17640 PF11638 DnaA N-terminal domain BF28_RS17640 PF00308 Bacterial dnaA protein BF28_RS17640 PF08299 Bacterial dnaA protein helix-turn-helix BF28_RS17645 PF00344 SecY translocase BF28_RS17650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS17670 PF01447 Thermolysin metallopeptidase, catalytic domain BF28_RS17670 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF28_RS17670 PF03413 Peptidase propeptide and YPEB domain BF28_RS17670 PF07504 Fungalysin/Thermolysin Propeptide Motif BF28_RS17675 PF00128 Alpha amylase, catalytic domain BF28_RS17675 PF03714 Bacterial pullanase-associated domain BF28_RS17675 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF28_RS17680 PF01569 PAP2 superfamily BF28_RS17700 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS17720 PF01266 FAD dependent oxidoreductase BF28_RS17760 PF01541 GIY-YIG catalytic domain BF28_RS17770 PF02673 Bacitracin resistance protein BacA BF28_RS17785 PF12867 DinB superfamily BF28_RS17795 PF08000 Bacterial PH domain BF28_RS17800 PF01734 Patatin-like phospholipase BF28_RS17825 PF09234 Domain of unknown function (DUF1963) BF28_RS17845 PF00293 NUDIX domain BF28_RS17850 PF00712 DNA polymerase III beta subunit, N-terminal domain BF28_RS17850 PF02767 DNA polymerase III beta subunit, central domain BF28_RS17850 PF02768 DNA polymerase III beta subunit, C-terminal domain BF28_RS17855 PF09297 NADH pyrophosphatase zinc ribbon domain BF28_RS17855 PF00293 NUDIX domain BF28_RS17860 PF07690 Major Facilitator Superfamily BF28_RS17880 PF00293 NUDIX domain BF28_RS17895 PF01270 Glycosyl hydrolases family 8 BF28_RS17900 PF00892 EamA-like transporter family BF28_RS17905 PF00392 Bacterial regulatory proteins, gntR family BF28_RS17905 PF00155 Aminotransferase class I and II BF28_RS17925 PF03009 Glycerophosphoryl diester phosphodiesterase family BF28_RS17940 PF07690 Major Facilitator Superfamily BF28_RS17950 PF01609 Transposase DDE domain BF28_RS17955 PF09297 NADH pyrophosphatase zinc ribbon domain BF28_RS17955 PF00293 NUDIX domain BF28_RS17960 PF00144 Beta-lactamase BF28_RS17970 PF03965 Penicillinase repressor BF28_RS17990 PF00005 ABC transporter BF28_RS18000 PF01965 DJ-1/PfpI family BF28_RS18010 PF00239 Resolvase, N terminal domain BF28_RS18010 PF02796 Helix-turn-helix domain of resolvase BF28_RS18050 PF00905 Penicillin binding protein transpeptidase domain BF28_RS18050 PF03717 Penicillin-binding Protein dimerisation domain BF28_RS18050 PF03793 PASTA domain BF28_RS18055 PF01569 PAP2 superfamily BF28_RS18060 PF00107 Zinc-binding dehydrogenase BF28_RS18060 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS18065 PF04229 GrpB protein BF28_RS18075 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS18075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS18085 PF00005 ABC transporter BF28_RS18085 PF12558 ATP-binding cassette cobalt transporter BF28_RS18090 PF07155 ECF-type riboflavin transporter, S component BF28_RS18095 PF01177 Asp/Glu/Hydantoin racemase BF28_RS18100 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF28_RS18105 PF00905 Penicillin binding protein transpeptidase domain BF28_RS18105 PF03717 Penicillin-binding Protein dimerisation domain BF28_RS18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS18110 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS18110 PF00989 PAS fold BF28_RS18110 PF13426 PAS domain BF28_RS18110 PF13188 PAS domain BF28_RS18125 PF00067 Cytochrome P450 BF28_RS18135 PF07561 Domain of Unknown Function (DUF1540) BF28_RS18140 PF00132 Bacterial transferase hexapeptide (six repeats) BF28_RS18150 PF00067 Cytochrome P450 BF28_RS18245 PF03070 TENA/THI-4/PQQC family BF28_RS18250 PF07478 D-ala D-ala ligase C-terminus BF28_RS18250 PF01820 D-ala D-ala ligase N-terminus BF28_RS18255 PF00392 Bacterial regulatory proteins, gntR family BF28_RS18255 PF00155 Aminotransferase class I and II BF28_RS18260 PF01842 ACT domain BF28_RS18260 PF03447 Homoserine dehydrogenase, NAD binding domain BF28_RS18260 PF00742 Homoserine dehydrogenase BF28_RS18280 PF02687 FtsX-like permease family BF28_RS18285 PF00005 ABC transporter BF28_RS18300 PF00005 ABC transporter BF28_RS18300 PF12848 ABC transporter BF28_RS18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS18315 PF00486 Transcriptional regulatory protein, C terminal BF28_RS18315 PF00072 Response regulator receiver domain BF28_RS18320 PF03069 Acetamidase/Formamidase family BF28_RS18325 PF07486 Cell Wall Hydrolase BF28_RS18330 PF01921 tRNA synthetases class I (K) BF28_RS18340 PF08450 SMP-30/Gluconolactonase/LRE-like region BF28_RS18350 PF08245 Mur ligase middle domain BF28_RS18350 PF02875 Mur ligase family, glutamate ligase domain BF28_RS18350 PF01225 Mur ligase family, catalytic domain BF28_RS18370 PF08241 Methyltransferase domain BF28_RS18375 PF04239 Protein of unknown function (DUF421) BF28_RS18380 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS18380 PF00107 Zinc-binding dehydrogenase BF28_RS18395 PF00392 Bacterial regulatory proteins, gntR family BF28_RS18395 PF00155 Aminotransferase class I and II BF28_RS18410 PF12833 Helix-turn-helix domain BF28_RS18435 PF13847 Methyltransferase domain BF28_RS18445 PF07690 Major Facilitator Superfamily BF28_RS18450 PF09278 MerR, DNA binding BF28_RS18450 PF00376 MerR family regulatory protein BF28_RS18455 PF00144 Beta-lactamase BF28_RS18485 PF03413 Peptidase propeptide and YPEB domain BF28_RS18485 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF28_RS18485 PF07504 Fungalysin/Thermolysin Propeptide Motif BF28_RS18485 PF01447 Thermolysin metallopeptidase, catalytic domain BF28_RS18510 PF01048 Phosphorylase superfamily BF28_RS18515 PF13021 Domain of unknown function (DUF3885) BF28_RS18520 PF01966 HD domain BF28_RS18525 PF00486 Transcriptional regulatory protein, C terminal BF28_RS18525 PF00072 Response regulator receiver domain BF28_RS18530 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS18530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS18535 PF00768 D-alanyl-D-alanine carboxypeptidase BF28_RS18535 PF07943 Penicillin-binding protein 5, C-terminal domain BF28_RS18540 PF05163 DinB family BF28_RS18550 PF00485 Phosphoribulokinase / Uridine kinase family BF28_RS18555 PF00583 Acetyltransferase (GNAT) family BF28_RS18575 PF16177 Acetyl-coenzyme A synthetase N-terminus BF28_RS18575 PF00501 AMP-binding enzyme BF28_RS18575 PF13193 AMP-binding enzyme C-terminal domain BF28_RS18580 PF01039 Carboxyl transferase domain BF28_RS18585 PF00378 Enoyl-CoA hydratase/isomerase BF28_RS18590 PF00682 HMGL-like BF28_RS18595 PF00364 Biotin-requiring enzyme BF28_RS18600 PF00289 Biotin carboxylase, N-terminal domain BF28_RS18600 PF02785 Biotin carboxylase C-terminal domain BF28_RS18600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF28_RS18605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF28_RS18605 PF02770 Acyl-CoA dehydrogenase, middle domain BF28_RS18605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF28_RS18620 PF08359 YsiA-like protein, C-terminal region BF28_RS18620 PF00440 Bacterial regulatory proteins, tetR family BF28_RS18630 PF00005 ABC transporter BF28_RS18645 PF00581 Rhodanese-like domain BF28_RS18650 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS18670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS18670 PF02743 Cache domain BF28_RS18670 PF00672 HAMP domain BF28_RS18675 PF00990 Diguanylate cyclase, GGDEF domain BF28_RS18675 PF03707 Bacterial signalling protein N terminal repeat BF28_RS18675 PF00563 EAL domain BF28_RS18680 PF16326 ABC transporter C-terminal domain BF28_RS18680 PF00005 ABC transporter BF28_RS18685 PF00440 Bacterial regulatory proteins, tetR family BF28_RS18690 PF07968 Leukocidin/Hemolysin toxin family BF28_RS18695 PF00395 S-layer homology domain BF28_RS18695 PF01520 N-acetylmuramoyl-L-alanine amidase BF28_RS18705 PF02557 D-alanyl-D-alanine carboxypeptidase BF28_RS18715 PF12323 Helix-turn-helix domain BF28_RS18715 PF01385 Probable transposase BF28_RS18715 PF07282 Putative transposase DNA-binding domain BF28_RS18720 PF01381 Helix-turn-helix BF28_RS18725 PF18801 response regulator aspartate phosphatase H, N terminal BF28_RS18735 PF02872 5'-nucleotidase, C-terminal domain BF28_RS18735 PF00149 Calcineurin-like phosphoesterase BF28_RS18750 PF04962 KduI/IolB family BF28_RS18755 PF01116 Fructose-bisphosphate aldolase class-II BF28_RS18760 PF01261 Xylose isomerase-like TIM barrel BF28_RS18765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF28_RS18765 PF00205 Thiamine pyrophosphate enzyme, central domain BF28_RS18765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF28_RS18770 PF00171 Aldehyde dehydrogenase family BF28_RS18775 PF00294 pfkB family carbohydrate kinase BF28_RS18780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF28_RS18780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF28_RS18785 PF07690 Major Facilitator Superfamily BF28_RS18790 PF00356 Bacterial regulatory proteins, lacI family BF28_RS18795 PF01569 PAP2 superfamily BF28_RS18805 PF00905 Penicillin binding protein transpeptidase domain BF28_RS18805 PF03717 Penicillin-binding Protein dimerisation domain BF28_RS18810 PF00905 Penicillin binding protein transpeptidase domain BF28_RS18810 PF03717 Penicillin-binding Protein dimerisation domain BF28_RS18820 PF04542 Sigma-70 region 2 BF28_RS18820 PF08281 Sigma-70, region 4 BF28_RS18835 PF01546 Peptidase family M20/M25/M40 BF28_RS18835 PF07687 Peptidase dimerisation domain BF28_RS18865 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BF28_RS18870 PF00300 Histidine phosphatase superfamily (branch 1) BF28_RS18875 PF12802 MarR family BF28_RS18880 PF00205 Thiamine pyrophosphate enzyme, central domain BF28_RS18880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF28_RS18880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF28_RS18890 PF03848 Tellurite resistance protein TehB BF28_RS18890 PF09313 Domain of unknown function (DUF1971) BF28_RS18895 PF00005 ABC transporter BF28_RS18895 PF02687 FtsX-like permease family BF28_RS18895 PF12704 MacB-like periplasmic core domain BF28_RS18910 PF00440 Bacterial regulatory proteins, tetR family BF28_RS18910 PF17932 Tetracyclin repressor-like, C-terminal domain BF28_RS18925 PF00270 DEAD/DEAH box helicase BF28_RS18925 PF00271 Helicase conserved C-terminal domain BF28_RS18935 PF00753 Metallo-beta-lactamase superfamily BF28_RS18935 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF28_RS18950 PF00291 Pyridoxal-phosphate dependent enzyme BF28_RS18955 PF00266 Aminotransferase class-V BF28_RS18960 PF02660 Glycerol-3-phosphate acyltransferase BF28_RS18965 PF01869 BadF/BadG/BcrA/BcrD ATPase family BF28_RS18970 PF03702 Anhydro-N-acetylmuramic acid kinase BF28_RS18980 PF02378 Phosphotransferase system, EIIC BF28_RS18990 PF02638 Glycosyl hydrolase-like 10 BF28_RS19015 PF08281 Sigma-70, region 4 BF28_RS19015 PF12680 SnoaL-like domain BF28_RS19015 PF04542 Sigma-70 region 2 BF28_RS19030 PF02824 TGS domain BF28_RS19030 PF13291 ACT domain BF28_RS19030 PF04607 Region found in RelA / SpoT proteins BF28_RS19060 PF07883 Cupin domain BF28_RS19060 PF01381 Helix-turn-helix BF28_RS19065 PF01810 LysE type translocator BF28_RS19080 PF00005 ABC transporter BF28_RS19080 PF00664 ABC transporter transmembrane region BF28_RS19085 PF00005 ABC transporter BF28_RS19085 PF00664 ABC transporter transmembrane region BF28_RS19100 PF03475 3-alpha domain BF28_RS19100 PF03473 MOSC domain BF28_RS19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS19105 PF03466 LysR substrate binding domain BF28_RS19120 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF28_RS19120 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF28_RS19125 PF03466 LysR substrate binding domain BF28_RS19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS19130 PF07690 Major Facilitator Superfamily BF28_RS19135 PF01047 MarR family BF28_RS19160 PF00313 'Cold-shock' DNA-binding domain BF28_RS19170 PF13302 Acetyltransferase (GNAT) domain BF28_RS19185 PF01593 Flavin containing amine oxidoreductase BF28_RS19210 PF00583 Acetyltransferase (GNAT) family BF28_RS19225 PF00302 Chloramphenicol acetyltransferase BF28_RS19235 PF03176 MMPL family BF28_RS19240 PF02403 Seryl-tRNA synthetase N-terminal domain BF28_RS19240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF28_RS19245 PF00753 Metallo-beta-lactamase superfamily BF28_RS19245 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF28_RS19280 PF13649 Methyltransferase domain BF28_RS19290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF28_RS19290 PF00205 Thiamine pyrophosphate enzyme, central domain BF28_RS19290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF28_RS19305 PF07690 Major Facilitator Superfamily BF28_RS19310 PF12146 Serine aminopeptidase, S33 BF28_RS19320 PF00005 ABC transporter BF28_RS19325 PF03129 Anticodon binding domain BF28_RS19325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF28_RS19325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF28_RS19325 PF02824 TGS domain BF28_RS19330 PF01479 S4 domain BF28_RS19330 PF00849 RNA pseudouridylate synthase BF28_RS19335 PF16291 Domain of unknown function (DUF4937 BF28_RS19350 PF01235 Sodium:alanine symporter family BF28_RS19355 PF00082 Subtilase family BF28_RS19360 PF05163 DinB family BF28_RS19370 PF00216 Bacterial DNA-binding protein BF28_RS19385 PF07690 Major Facilitator Superfamily BF28_RS19390 PF03621 MbtH-like protein BF28_RS19395 PF00975 Thioesterase domain BF28_RS19395 PF00550 Phosphopantetheine attachment site BF28_RS19395 PF00668 Condensation domain BF28_RS19395 PF00501 AMP-binding enzyme BF28_RS19395 PF13193 AMP-binding enzyme C-terminal domain BF28_RS19400 PF00857 Isochorismatase family BF28_RS19400 PF00550 Phosphopantetheine attachment site BF28_RS19405 PF13193 AMP-binding enzyme C-terminal domain BF28_RS19405 PF00501 AMP-binding enzyme BF28_RS19410 PF00425 chorismate binding enzyme BF28_RS19415 PF00106 short chain dehydrogenase BF28_RS19420 PF07690 Major Facilitator Superfamily BF28_RS19440 PF01022 Bacterial regulatory protein, arsR family BF28_RS19450 PF13476 AAA domain BF28_RS19455 PF00149 Calcineurin-like phosphoesterase BF28_RS19455 PF12320 Type 5 capsule protein repressor C-terminal domain BF28_RS19460 PF10763 Protein of unknown function (DUF2584) BF28_RS19470 PF00378 Enoyl-CoA hydratase/isomerase BF28_RS19475 PF01810 LysE type translocator BF28_RS19480 PF00171 Aldehyde dehydrogenase family BF28_RS19485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF28_RS19485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF28_RS19490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF28_RS19490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF28_RS19490 PF02770 Acyl-CoA dehydrogenase, middle domain BF28_RS19500 PF03972 MmgE/PrpD family BF28_RS19505 PF00285 Citrate synthase, C-terminal domain BF28_RS19510 PF01521 Iron-sulphur cluster biosynthesis BF28_RS19515 PF07690 Major Facilitator Superfamily BF28_RS19525 PF00912 Transglycosylase BF28_RS19525 PF00905 Penicillin binding protein transpeptidase domain BF28_RS19545 PF10676 Spore germination protein gerPA/gerPF BF28_RS19635 PF00085 Thioredoxin BF28_RS19640 PF16916 Dimerisation domain of Zinc Transporter BF28_RS19640 PF01545 Cation efflux family BF28_RS19645 PF01569 PAP2 superfamily BF28_RS19650 PF07070 SpoOM protein BF28_RS19655 PF00069 Protein kinase domain BF28_RS19655 PF08239 Bacterial SH3 domain BF28_RS19665 PF14162 YozD-like protein BF28_RS19680 PF06855 YozE SAM-like fold BF28_RS19685 PF14122 YokU-like protein, putative antitoxin BF28_RS19690 PF12544 Lysine-2,3-aminomutase BF28_RS19695 PF13426 PAS domain BF28_RS19695 PF00158 Sigma-54 interaction domain BF28_RS19695 PF02954 Bacterial regulatory protein, Fis family BF28_RS19700 PF00583 Acetyltransferase (GNAT) family BF28_RS19705 PF01546 Peptidase family M20/M25/M40 BF28_RS19705 PF07687 Peptidase dimerisation domain BF28_RS19710 PF01144 Coenzyme A transferase BF28_RS19715 PF01144 Coenzyme A transferase BF28_RS19720 PF00202 Aminotransferase class-III BF28_RS19730 PF09385 Histidine kinase N terminal BF28_RS19735 PF07997 Protein of unknown function (DUF1694) BF28_RS19740 PF00171 Aldehyde dehydrogenase family BF28_RS19745 PF03471 Transporter associated domain BF28_RS19745 PF00571 CBS domain BF28_RS19745 PF01595 Cyclin M transmembrane N-terminal domain BF28_RS19775 PF13520 Amino acid permease BF28_RS19780 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS19785 PF00571 CBS domain BF28_RS19785 PF00005 ABC transporter BF28_RS19800 PF03358 NADPH-dependent FMN reductase BF28_RS19815 PF10924 Protein of unknown function (DUF2711) BF28_RS19825 PF00144 Beta-lactamase BF28_RS19840 PF00107 Zinc-binding dehydrogenase BF28_RS19840 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS19845 PF01380 SIS domain BF28_RS19845 PF01418 Helix-turn-helix domain, rpiR family BF28_RS19850 PF00196 Bacterial regulatory proteins, luxR family BF28_RS19850 PF00072 Response regulator receiver domain BF28_RS19855 PF07730 Histidine kinase BF28_RS19855 PF13185 GAF domain BF28_RS19860 PF00924 Mechanosensitive ion channel BF28_RS19865 PF00011 Hsp20/alpha crystallin family BF28_RS19870 PF00293 NUDIX domain BF28_RS19875 PF00857 Isochorismatase family BF28_RS19890 PF00881 Nitroreductase family BF28_RS19895 PF01063 Amino-transferase class IV BF28_RS19900 PF01497 Periplasmic binding protein BF28_RS19920 PF13537 Glutamine amidotransferase domain BF28_RS19920 PF00733 Asparagine synthase BF28_RS19925 PF00011 Hsp20/alpha crystallin family BF28_RS19930 PF02630 SCO1/SenC BF28_RS19940 PF02645 Uncharacterised protein, DegV family COG1307 BF28_RS19950 PF00902 Sec-independent protein translocase protein (TatC) BF28_RS19955 PF02416 mttA/Hcf106 family BF28_RS19960 PF03006 Haemolysin-III related BF28_RS19965 PF01553 Acyltransferase BF28_RS19970 PF02525 Flavodoxin-like fold BF28_RS19975 PF05223 NTF2-like N-terminal transpeptidase domain BF28_RS19975 PF03717 Penicillin-binding Protein dimerisation domain BF28_RS19975 PF00905 Penicillin binding protein transpeptidase domain BF28_RS19980 PF00186 Dihydrofolate reductase BF28_RS19985 PF00303 Thymidylate synthase BF28_RS19990 PF08531 Alpha-L-rhamnosidase N-terminal domain BF28_RS19990 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain BF28_RS19990 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain BF28_RS19990 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain BF28_RS19995 PF07930 D-aminopeptidase, domain B BF28_RS19995 PF00144 Beta-lactamase BF28_RS20015 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS20020 PF14005 YpjP-like protein BF28_RS20025 PF05975 Bacterial ABC transporter protein EcsB BF28_RS20030 PF00005 ABC transporter BF28_RS20045 PF00583 Acetyltransferase (GNAT) family BF28_RS20050 PF01980 tRNA-methyltransferase O BF28_RS20055 PF01177 Asp/Glu/Hydantoin racemase BF28_RS20060 PF00465 Iron-containing alcohol dehydrogenase BF28_RS20070 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS20075 PF10997 Alternate to MurJ BF28_RS20090 PF00209 Sodium:neurotransmitter symporter family BF28_RS20165 PF01580 FtsK/SpoIIIE family BF28_RS20165 PF12538 DNA transporter BF28_RS20185 PF00152 tRNA synthetases class II (D, K and N) BF28_RS20185 PF01336 OB-fold nucleic acid binding domain BF28_RS20190 PF02875 Mur ligase family, glutamate ligase domain BF28_RS20190 PF01225 Mur ligase family, catalytic domain BF28_RS20190 PF08245 Mur ligase middle domain BF28_RS20205 PF08264 Anticodon-binding domain of tRNA BF28_RS20205 PF00133 tRNA synthetases class I (I, L, M and V) BF28_RS20220 PF00750 tRNA synthetases class I (R) BF28_RS20220 PF05746 DALR anticodon binding domain BF28_RS20220 PF03485 Arginyl tRNA synthetase N terminal domain BF28_RS20225 PF04445 Putative SAM-dependent methyltransferase BF28_RS20230 PF06491 Disulphide isomerase BF28_RS20240 PF13769 Virulence factor BF28_RS20240 PF08712 Scaffold protein Nfu/NifU N terminal BF28_RS20245 PF01494 FAD binding domain BF28_RS20255 PF00436 Single-strand binding protein family BF28_RS20270 PF00005 ABC transporter BF28_RS20270 PF12848 ABC transporter BF28_RS20270 PF16326 ABC transporter C-terminal domain BF28_RS20275 PF01966 HD domain BF28_RS20310 PF04232 Stage V sporulation protein S (SpoVS) BF28_RS20345 PF01814 Hemerythrin HHE cation binding domain BF28_RS20345 PF04405 Domain of Unknown function (DUF542) BF28_RS20350 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF28_RS20350 PF18267 Rubredoxin NAD+ reductase C-terminal domain BF28_RS20350 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS20350 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF28_RS20350 PF04324 BFD-like [2Fe-2S] binding domain BF28_RS20355 PF00355 Rieske [2Fe-2S] domain BF28_RS20360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF28_RS20365 PF01903 CbiX BF28_RS20385 PF07690 Major Facilitator Superfamily BF28_RS20395 PF02391 MoaE protein BF28_RS20400 PF03453 MoeA N-terminal region (domain I and II) BF28_RS20400 PF00994 Probable molybdopterin binding domain BF28_RS20400 PF03454 MoeA C-terminal region (domain IV) BF28_RS20405 PF00899 ThiF family BF28_RS20410 PF04055 Radical SAM superfamily BF28_RS20410 PF06463 Molybdenum Cofactor Synthesis C BF28_RS20415 PF00325 Bacterial regulatory proteins, crp family BF28_RS20415 PF00027 Cyclic nucleotide-binding domain BF28_RS20420 PF02665 Nitrate reductase gamma subunit BF28_RS20425 PF02613 Nitrate reductase delta subunit BF28_RS20430 PF13247 4Fe-4S dicluster domain BF28_RS20430 PF14711 Respiratory nitrate reductase beta C-terminal BF28_RS20435 PF01568 Molydopterin dinucleotide binding domain BF28_RS20435 PF00384 Molybdopterin oxidoreductase BF28_RS20435 PF14710 Respiratory nitrate reductase alpha N-terminal BF28_RS20450 PF17863 AAA lid domain BF28_RS20450 PF07726 ATPase family associated with various cellular activities (AAA) BF28_RS20455 PF01882 Protein of unknown function DUF58 BF28_RS20460 PF13559 Domain of unknown function (DUF4129) BF28_RS20460 PF01841 Transglutaminase-like superfamily BF28_RS20460 PF11992 Domain of unknown function (DUF3488) BF28_RS20465 PF00255 Glutathione peroxidase BF28_RS20475 PF00258 Flavodoxin BF28_RS20475 PF01613 Flavin reductase like domain BF28_RS20490 PF08281 Sigma-70, region 4 BF28_RS20490 PF04542 Sigma-70 region 2 BF28_RS20495 PF00107 Zinc-binding dehydrogenase BF28_RS20495 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS20505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS20510 PF01261 Xylose isomerase-like TIM barrel BF28_RS20515 PF00271 Helicase conserved C-terminal domain BF28_RS20515 PF00270 DEAD/DEAH box helicase BF28_RS20525 PF01268 Formate--tetrahydrofolate ligase BF28_RS20530 PF01209 ubiE/COQ5 methyltransferase family BF28_RS20555 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF28_RS20620 PF00583 Acetyltransferase (GNAT) family BF28_RS20650 PF00392 Bacterial regulatory proteins, gntR family BF28_RS20650 PF00155 Aminotransferase class I and II BF28_RS20655 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF28_RS20655 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS20660 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF28_RS20675 PF01209 ubiE/COQ5 methyltransferase family BF28_RS20680 PF01168 Alanine racemase, N-terminal domain BF28_RS20680 PF00842 Alanine racemase, C-terminal domain BF28_RS20695 PF00300 Histidine phosphatase superfamily (branch 1) BF28_RS20700 PF01145 SPFH domain / Band 7 family BF28_RS20710 PF07690 Major Facilitator Superfamily BF28_RS20715 PF01425 Amidase BF28_RS20725 PF02557 D-alanyl-D-alanine carboxypeptidase BF28_RS20735 PF07454 Stage II sporulation protein P (SpoIIP) BF28_RS20755 PF01588 Putative tRNA binding domain BF28_RS20760 PF05525 Branched-chain amino acid transport protein BF28_RS20775 PF00571 CBS domain BF28_RS20775 PF01595 Cyclin M transmembrane N-terminal domain BF28_RS20775 PF03471 Transporter associated domain BF28_RS20780 PF04306 Protein of unknown function (DUF456) BF28_RS20785 PF13460 NAD(P)H-binding BF28_RS20800 PF13091 PLD-like domain BF28_RS20800 PF13396 Phospholipase_D-nuclease N-terminal BF28_RS20805 PF03061 Thioesterase superfamily BF28_RS20810 PF09323 Domain of unknown function (DUF1980) BF28_RS20815 PF03773 Predicted permease BF28_RS20825 PF01943 Polysaccharide biosynthesis protein BF28_RS20825 PF14667 Polysaccharide biosynthesis C-terminal domain BF28_RS20830 PF09335 SNARE associated Golgi protein BF28_RS20835 PF00293 NUDIX domain BF28_RS20840 PF08757 CotH kinase protein BF28_RS20850 PF00300 Histidine phosphatase superfamily (branch 1) BF28_RS20860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS20865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS20875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF28_RS20875 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF28_RS20880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF28_RS20885 PF13460 NAD(P)H-binding BF28_RS20895 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BF28_RS20895 PF01297 Zinc-uptake complex component A periplasmic BF28_RS20955 PF00583 Acetyltransferase (GNAT) family BF28_RS20960 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF28_RS20960 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF28_RS20965 PF00248 Aldo/keto reductase family BF28_RS20975 PF01593 Flavin containing amine oxidoreductase BF28_RS20985 PF00296 Luciferase-like monooxygenase BF28_RS21000 PF00210 Ferritin-like domain BF28_RS21025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS21025 PF00672 HAMP domain BF28_RS21025 PF02743 Cache domain BF28_RS21030 PF03193 RsgA GTPase BF28_RS21050 PF07690 Major Facilitator Superfamily BF28_RS21055 PF00248 Aldo/keto reductase family BF28_RS21060 PF01022 Bacterial regulatory protein, arsR family BF28_RS21065 PF00082 Subtilase family BF28_RS21070 PF18277 AbrB C-terminal domain BF28_RS21070 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF28_RS21075 PF02687 FtsX-like permease family BF28_RS21080 PF02540 NAD synthase BF28_RS21085 PF00293 NUDIX domain BF28_RS21085 PF13344 Haloacid dehalogenase-like hydrolase BF28_RS21110 PF01734 Patatin-like phospholipase BF28_RS21120 PF00155 Aminotransferase class I and II BF28_RS21120 PF00392 Bacterial regulatory proteins, gntR family BF28_RS21125 PF01810 LysE type translocator BF28_RS21130 PF07690 Major Facilitator Superfamily BF28_RS21135 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF28_RS21140 PF01261 Xylose isomerase-like TIM barrel BF28_RS21155 PF00501 AMP-binding enzyme BF28_RS21155 PF13193 AMP-binding enzyme C-terminal domain BF28_RS21160 PF04183 IucA / IucC family BF28_RS21160 PF06276 Ferric iron reductase FhuF-like transporter BF28_RS21165 PF06276 Ferric iron reductase FhuF-like transporter BF28_RS21165 PF04183 IucA / IucC family BF28_RS21170 PF00583 Acetyltransferase (GNAT) family BF28_RS21175 PF02308 MgtC family BF28_RS21185 PF01522 Polysaccharide deacetylase BF28_RS21190 PF00989 PAS fold BF28_RS21190 PF16736 Single Cache-like BF28_RS21190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS21190 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS21195 PF00486 Transcriptional regulatory protein, C terminal BF28_RS21195 PF00072 Response regulator receiver domain BF28_RS21205 PF03816 Cell envelope-related transcriptional attenuator domain BF28_RS21220 PF08544 GHMP kinases C terminal BF28_RS21220 PF00288 GHMP kinases N terminal domain BF28_RS21225 PF00291 Pyridoxal-phosphate dependent enzyme BF28_RS21230 PF00742 Homoserine dehydrogenase BF28_RS21230 PF03447 Homoserine dehydrogenase, NAD binding domain BF28_RS21230 PF01842 ACT domain BF28_RS21250 PF01522 Polysaccharide deacetylase BF28_RS21255 PF04439 Streptomycin adenylyltransferase BF28_RS21260 PF01596 O-methyltransferase BF28_RS21265 PF00106 short chain dehydrogenase BF28_RS21275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS21275 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS21275 PF00989 PAS fold BF28_RS21275 PF16736 Single Cache-like BF28_RS21280 PF00486 Transcriptional regulatory protein, C terminal BF28_RS21280 PF00072 Response regulator receiver domain BF28_RS21285 PF00664 ABC transporter transmembrane region BF28_RS21285 PF00005 ABC transporter BF28_RS21295 PF01476 LysM domain BF28_RS21295 PF00877 NlpC/P60 family BF28_RS21310 PF07943 Penicillin-binding protein 5, C-terminal domain BF28_RS21310 PF00768 D-alanyl-D-alanine carboxypeptidase BF28_RS21315 PF02016 LD-carboxypeptidase N-terminal domain BF28_RS21315 PF17676 LD-carboxypeptidase C-terminal domain BF28_RS21330 PF00005 ABC transporter BF28_RS21330 PF00664 ABC transporter transmembrane region BF28_RS21335 PF00664 ABC transporter transmembrane region BF28_RS21335 PF00005 ABC transporter BF28_RS21340 PF02322 Cytochrome bd terminal oxidase subunit II BF28_RS21345 PF01654 Cytochrome bd terminal oxidase subunit I BF28_RS21360 PF01047 MarR family BF28_RS21370 PF14552 Tautomerase enzyme BF28_RS21380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS21380 PF03466 LysR substrate binding domain BF28_RS21390 PF02653 Branched-chain amino acid transport system / permease component BF28_RS21395 PF00005 ABC transporter BF28_RS21400 PF12399 Branched-chain amino acid ATP-binding cassette transporter BF28_RS21400 PF00005 ABC transporter BF28_RS21410 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF28_RS21410 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF28_RS21415 PF01575 MaoC like domain BF28_RS21420 PF00501 AMP-binding enzyme BF28_RS21420 PF13193 AMP-binding enzyme C-terminal domain BF28_RS21435 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF28_RS21435 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF28_RS21440 PF01593 Flavin containing amine oxidoreductase BF28_RS21445 PF00056 lactate/malate dehydrogenase, NAD binding domain BF28_RS21445 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF28_RS21450 PF01594 AI-2E family transporter BF28_RS21455 PF01425 Amidase BF28_RS21465 PF00881 Nitroreductase family BF28_RS21470 PF01323 DSBA-like thioredoxin domain BF28_RS21475 PF02082 Transcriptional regulator BF28_RS21480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS21480 PF03466 LysR substrate binding domain BF28_RS21485 PF00892 EamA-like transporter family BF28_RS21495 PF07987 Domain of unkown function (DUF1775) BF28_RS21500 PF05425 Copper resistance protein D BF28_RS21500 PF04234 CopC domain BF28_RS21500 PF13115 YtkA-like BF28_RS21510 PF05525 Branched-chain amino acid transport protein BF28_RS21515 PF02525 Flavodoxin-like fold BF28_RS21530 PF01751 Toprim domain BF28_RS21530 PF01131 DNA topoisomerase BF28_RS21530 PF01396 Topoisomerase DNA binding C4 zinc finger BF28_RS21530 PF13342 C-terminal repeat of topoisomerase BF28_RS21535 PF18277 AbrB C-terminal domain BF28_RS21535 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF28_RS21550 PF00005 ABC transporter BF28_RS21565 PF00664 ABC transporter transmembrane region BF28_RS21565 PF00005 ABC transporter BF28_RS21570 PF00501 AMP-binding enzyme BF28_RS21570 PF00550 Phosphopantetheine attachment site BF28_RS21570 PF13193 AMP-binding enzyme C-terminal domain BF28_RS21570 PF00975 Thioesterase domain BF28_RS21570 PF00668 Condensation domain BF28_RS21575 PF00668 Condensation domain BF28_RS21575 PF00550 Phosphopantetheine attachment site BF28_RS21575 PF00501 AMP-binding enzyme BF28_RS21575 PF00975 Thioesterase domain BF28_RS21575 PF13193 AMP-binding enzyme C-terminal domain BF28_RS21580 PF00501 AMP-binding enzyme BF28_RS21580 PF13193 AMP-binding enzyme C-terminal domain BF28_RS21580 PF00668 Condensation domain BF28_RS21580 PF00550 Phosphopantetheine attachment site BF28_RS21580 PF00975 Thioesterase domain BF28_RS21590 PF00975 Thioesterase domain BF28_RS21595 PF00557 Metallopeptidase family M24 BF28_RS21595 PF05195 Aminopeptidase P, N-terminal domain BF28_RS21615 PF05979 Bacterial protein of unknown function (DUF896) BF28_RS21620 PF07301 Protein of unknown function (DUF1453) BF28_RS21625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF28_RS21630 PF00591 Glycosyl transferase family, a/b domain BF28_RS21630 PF02885 Glycosyl transferase family, helical bundle domain BF28_RS21630 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BF28_RS21635 PF01773 Na+ dependent nucleoside transporter N-terminus BF28_RS21635 PF07662 Na+ dependent nucleoside transporter C-terminus BF28_RS21640 PF01791 DeoC/LacD family aldolase BF28_RS21645 PF04198 Putative sugar-binding domain BF28_RS21655 PF05791 Bacillus haemolytic enterotoxin (HBL) BF28_RS21660 PF05791 Bacillus haemolytic enterotoxin (HBL) BF28_RS21670 PF13520 Amino acid permease BF28_RS21680 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF28_RS21680 PF02558 Ketopantoate reductase PanE/ApbA BF28_RS21690 PF17773 UPF0176 acylphosphatase like domain BF28_RS21690 PF12368 Rhodanase C-terminal BF28_RS21690 PF00581 Rhodanese-like domain BF28_RS21695 PF01566 Natural resistance-associated macrophage protein BF28_RS21710 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS21710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS21715 PF00072 Response regulator receiver domain BF28_RS21715 PF00486 Transcriptional regulatory protein, C terminal BF28_RS21720 PF13302 Acetyltransferase (GNAT) domain BF28_RS21745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS21750 PF13026 Protein of unknown function (DUF3887) BF28_RS21750 PF12146 Serine aminopeptidase, S33 BF28_RS21755 PF01979 Amidohydrolase family BF28_RS21770 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BF28_RS21770 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BF28_RS21775 PF04397 LytTr DNA-binding domain BF28_RS21775 PF00072 Response regulator receiver domain BF28_RS21785 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BF28_RS21790 PF07690 Major Facilitator Superfamily BF28_RS21805 PF09587 Bacterial capsule synthesis protein PGA_cap BF28_RS21815 PF00585 C-terminal regulatory domain of Threonine dehydratase BF28_RS21815 PF00291 Pyridoxal-phosphate dependent enzyme BF28_RS21820 PF00920 Dehydratase family BF28_RS21825 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF28_RS21825 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF28_RS21835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF28_RS21835 PF00205 Thiamine pyrophosphate enzyme, central domain BF28_RS21835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF28_RS21840 PF01063 Amino-transferase class IV BF28_RS21850 PF01625 Peptide methionine sulfoxide reductase BF28_RS21865 PF04239 Protein of unknown function (DUF421) BF28_RS21875 PF03422 Carbohydrate binding module (family 6) BF28_RS21875 PF01522 Polysaccharide deacetylase BF28_RS21875 PF00457 Glycosyl hydrolases family 11 BF28_RS21880 PF00209 Sodium:neurotransmitter symporter family BF28_RS21885 PF01943 Polysaccharide biosynthesis protein BF28_RS21885 PF14667 Polysaccharide biosynthesis C-terminal domain BF28_RS21900 PF00291 Pyridoxal-phosphate dependent enzyme BF28_RS21905 PF07690 Major Facilitator Superfamily BF28_RS21910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS21915 PF13167 GTP-binding GTPase N-terminal BF28_RS21915 PF16360 GTP-binding GTPase Middle Region BF28_RS21915 PF01926 50S ribosome-binding GTPase BF28_RS21925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF28_RS21925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF28_RS21930 PF07690 Major Facilitator Superfamily BF28_RS21935 PF07690 Major Facilitator Superfamily BF28_RS21940 PF03551 Transcriptional regulator PadR-like family BF28_RS21940 PF10400 Virulence activator alpha C-term BF28_RS21945 PF03976 Polyphosphate kinase 2 (PPK2) BF28_RS21950 PF00480 ROK family BF28_RS21955 PF00294 pfkB family carbohydrate kinase BF28_RS21960 PF01116 Fructose-bisphosphate aldolase class-II BF28_RS21965 PF01979 Amidohydrolase family BF28_RS21970 PF01380 SIS domain BF28_RS21975 PF07702 UTRA domain BF28_RS21975 PF00392 Bacterial regulatory proteins, gntR family BF28_RS21985 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS21990 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS21995 PF01547 Bacterial extracellular solute-binding protein BF28_RS22000 PF13556 PucR C-terminal helix-turn-helix domain BF28_RS22005 PF03459 TOBE domain BF28_RS22005 PF17912 MalK OB fold domain BF28_RS22005 PF00005 ABC transporter BF28_RS22020 PF07690 Major Facilitator Superfamily BF28_RS22030 PF00395 S-layer homology domain BF28_RS22030 PF13205 Bacterial Ig-like domain BF28_RS22030 PF02368 Bacterial Ig-like domain (group 2) BF28_RS22035 PF00293 NUDIX domain BF28_RS22040 PF14158 YndJ-like protein BF28_RS22045 PF13761 Domain of unknown function (DUF4166) BF28_RS22060 PF00696 Amino acid kinase family BF28_RS22060 PF13840 ACT domain BF28_RS22070 PF01381 Helix-turn-helix BF28_RS22075 PF03590 Aspartate-ammonia ligase BF28_RS22095 PF00271 Helicase conserved C-terminal domain BF28_RS22095 PF00176 SNF2 family N-terminal domain BF28_RS22095 PF04434 SWIM zinc finger BF28_RS22100 PF08664 YcbB domain BF28_RS22100 PF00072 Response regulator receiver domain BF28_RS22105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS22110 PF00390 Malic enzyme, N-terminal domain BF28_RS22110 PF03949 Malic enzyme, NAD binding domain BF28_RS22115 PF10415 Fumarase C C-terminus BF28_RS22115 PF00206 Lyase BF28_RS22120 PF00375 Sodium:dicarboxylate symporter family BF28_RS22125 PF00696 Amino acid kinase family BF28_RS22130 PF13091 PLD-like domain BF28_RS22145 PF00005 ABC transporter BF28_RS22150 PF13185 GAF domain BF28_RS22150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS22150 PF13492 GAF domain BF28_RS22150 PF07730 Histidine kinase BF28_RS22155 PF00072 Response regulator receiver domain BF28_RS22155 PF00196 Bacterial regulatory proteins, luxR family BF28_RS22180 PF04286 Protein of unknown function (DUF445) BF28_RS22185 PF00291 Pyridoxal-phosphate dependent enzyme BF28_RS22200 PF00578 AhpC/TSA family BF28_RS22205 PF02683 Cytochrome C biogenesis protein transmembrane region BF28_RS22225 PF03575 Peptidase family S51 BF28_RS22230 PF01554 MatE BF28_RS22250 PF10415 Fumarase C C-terminus BF28_RS22250 PF00206 Lyase BF28_RS22255 PF03553 Na+/H+ antiporter family BF28_RS22260 PF00535 Glycosyl transferase family 2 BF28_RS22265 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF28_RS22265 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF28_RS22270 PF00892 EamA-like transporter family BF28_RS22275 PF07729 FCD domain BF28_RS22275 PF00392 Bacterial regulatory proteins, gntR family BF28_RS22285 PF01545 Cation efflux family BF28_RS22285 PF16916 Dimerisation domain of Zinc Transporter BF28_RS22305 PF13537 Glutamine amidotransferase domain BF28_RS22305 PF00733 Asparagine synthase BF28_RS22315 PF01047 MarR family BF28_RS22325 PF00561 alpha/beta hydrolase fold BF28_RS22335 PF00300 Histidine phosphatase superfamily (branch 1) BF28_RS22345 PF00768 D-alanyl-D-alanine carboxypeptidase BF28_RS22345 PF07943 Penicillin-binding protein 5, C-terminal domain BF28_RS22360 PF10787 Uncharacterised protein from bacillus cereus group BF28_RS22370 PF12706 Beta-lactamase superfamily domain BF28_RS22370 PF00753 Metallo-beta-lactamase superfamily BF28_RS22375 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS22385 PF00005 ABC transporter BF28_RS22385 PF08402 TOBE domain BF28_RS22390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS22390 PF03466 LysR substrate binding domain BF28_RS22410 PF08141 Small acid-soluble spore protein H family BF28_RS22415 PF03992 Antibiotic biosynthesis monooxygenase BF28_RS22430 PF17329 Family of unknown function (DUF5367) BF28_RS22435 PF00440 Bacterial regulatory proteins, tetR family BF28_RS22435 PF17932 Tetracyclin repressor-like, C-terminal domain BF28_RS22460 PF02272 DHHA1 domain BF28_RS22460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF28_RS22460 PF01411 tRNA synthetases class II (A) BF28_RS22465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF28_RS22465 PF00460 Flagella basal body rod protein BF28_RS22470 PF00448 SRP54-type protein, GTPase domain BF28_RS22475 PF00771 FHIPEP family BF28_RS22480 PF01312 FlhB HrpN YscU SpaS Family BF28_RS22490 PF01313 Bacterial export proteins, family 3 BF28_RS22495 PF00813 FliP family BF28_RS22505 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF28_RS22505 PF04509 CheC-like family BF28_RS22510 PF02154 Flagellar motor switch protein FliM BF28_RS22510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF28_RS22520 PF01464 Transglycosylase SLT domain BF28_RS22525 PF00700 Bacterial flagellin C-terminal helical region BF28_RS22525 PF00669 Bacterial flagellin N-terminal helical region BF28_RS22525 PF00700 Bacterial flagellin C-terminal helical region BF28_RS22525 PF00669 Bacterial flagellin N-terminal helical region BF28_RS22530 PF00700 Bacterial flagellin C-terminal helical region BF28_RS22530 PF00669 Bacterial flagellin N-terminal helical region BF28_RS22535 PF12181 DNA binding domain of the motility gene repressor (MogR) BF28_RS22540 PF01584 CheW-like domain BF28_RS22540 PF00072 Response regulator receiver domain BF28_RS22555 PF00460 Flagella basal body rod protein BF28_RS22555 PF07559 Flagellar basal body protein FlaE BF28_RS22555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF28_RS22575 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF28_RS22575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF28_RS22575 PF18269 T3SS EscN ATPase C-terminal domain BF28_RS22585 PF14842 FliG N-terminal domain BF28_RS22585 PF14841 FliG middle domain BF28_RS22585 PF01706 FliG C-terminal domain BF28_RS22590 PF08345 Flagellar M-ring protein C-terminal BF28_RS22590 PF01514 Secretory protein of YscJ/FliF family BF28_RS22595 PF02049 Flagellar hook-basal body complex protein FliE BF28_RS22600 PF00460 Flagella basal body rod protein BF28_RS22600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF28_RS22605 PF00460 Flagella basal body rod protein BF28_RS22620 PF07195 Flagellar hook-associated protein 2 C-terminus BF28_RS22620 PF02465 Flagellar hook-associated protein 2 N-terminus BF28_RS22620 PF07196 Flagellin hook IN motif BF28_RS22625 PF00669 Bacterial flagellin N-terminal helical region BF28_RS22625 PF00700 Bacterial flagellin C-terminal helical region BF28_RS22630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF28_RS22630 PF00460 Flagella basal body rod protein BF28_RS22650 PF03705 CheR methyltransferase, all-alpha domain BF28_RS22650 PF01739 CheR methyltransferase, SAM binding domain BF28_RS22665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF28_RS22665 PF04509 CheC-like family BF28_RS22670 PF01627 Hpt domain BF28_RS22670 PF07194 P2 response regulator binding domain BF28_RS22670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS22670 PF02895 Signal transducing histidine kinase, homodimeric domain BF28_RS22670 PF01584 CheW-like domain BF28_RS22675 PF00072 Response regulator receiver domain BF28_RS22680 PF00691 OmpA family BF28_RS22680 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF28_RS22685 PF01618 MotA/TolQ/ExbB proton channel family BF28_RS22695 PF17209 Hfq protein BF28_RS22750 PF00881 Nitroreductase family BF28_RS22760 PF02698 DUF218 domain BF28_RS22765 PF04239 Protein of unknown function (DUF421) BF28_RS22775 PF06445 GyrI-like small molecule binding domain BF28_RS22775 PF13411 MerR HTH family regulatory protein BF28_RS22780 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF28_RS22780 PF00753 Metallo-beta-lactamase superfamily BF28_RS22780 PF17770 Ribonuclease J C-terminal domain BF28_RS22785 PF00999 Sodium/hydrogen exchanger family BF28_RS22795 PF00202 Aminotransferase class-III BF28_RS22800 PF00474 Sodium:solute symporter family BF28_RS22805 PF04341 Protein of unknown function, DUF485 BF28_RS22820 PF01810 LysE type translocator BF28_RS22825 PF08892 YqcI/YcgG family BF28_RS22830 PF00313 'Cold-shock' DNA-binding domain BF28_RS22855 PF01263 Aldose 1-epimerase BF28_RS22860 PF13456 Reverse transcriptase-like BF28_RS22880 PF13673 Acetyltransferase (GNAT) domain BF28_RS22880 PF18014 Acetyltransferase (GNAT) domain BF28_RS22895 PF01367 5'-3' exonuclease, C-terminal SAM fold BF28_RS22895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF28_RS22900 PF00689 Cation transporting ATPase, C-terminus BF28_RS22900 PF00690 Cation transporter/ATPase, N-terminus BF28_RS22910 PF03738 Glutathionylspermidine synthase preATP-grasp BF28_RS22925 PF00581 Rhodanese-like domain BF28_RS22930 PF10752 Protein of unknown function (DUF2533) BF28_RS22935 PF00583 Acetyltransferase (GNAT) family BF28_RS22945 PF00350 Dynamin family BF28_RS22950 PF04235 Protein of unknown function (DUF418) BF28_RS22955 PF00860 Permease family BF28_RS22960 PF00156 Phosphoribosyl transferase domain BF28_RS22965 PF00557 Metallopeptidase family M24 BF28_RS22970 PF01636 Phosphotransferase enzyme family BF28_RS22980 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BF28_RS22985 PF13307 Helicase C-terminal domain BF28_RS22995 PF02926 THUMP domain BF28_RS22995 PF01170 Putative RNA methylase family UPF0020 BF28_RS23000 PF05103 DivIVA protein BF28_RS23005 PF06908 YspA SLOG family BF28_RS23035 PF10720 Protein of unknown function (DUF2515) BF28_RS23040 PF03838 Recombination protein U BF28_RS23045 PF00912 Transglycosylase BF28_RS23045 PF00905 Penicillin binding protein transpeptidase domain BF28_RS23055 PF10576 Iron-sulfur binding domain of endonuclease III BF28_RS23055 PF00633 Helix-hairpin-helix motif BF28_RS23055 PF00730 HhH-GPD superfamily base excision DNA repair protein BF28_RS23060 PF07261 Replication initiation and membrane attachment BF28_RS23065 PF00155 Aminotransferase class I and II BF28_RS23075 PF14084 Protein of unknown function (DUF4264) BF28_RS23080 PF00929 Exonuclease BF28_RS23080 PF13307 Helicase C-terminal domain BF28_RS23080 PF04851 Type III restriction enzyme, res subunit BF28_RS23085 PF02261 Aspartate decarboxylase BF28_RS23090 PF02569 Pantoate-beta-alanine ligase BF28_RS23095 PF02548 Ketopantoate hydroxymethyltransferase BF28_RS23110 PF08279 HTH domain BF28_RS23110 PF03099 Biotin/lipoate A/B protein ligase family BF28_RS23110 PF02237 Biotin protein ligase C terminal domain BF28_RS23115 PF13735 tRNA nucleotidyltransferase domain 2 putative BF28_RS23115 PF12627 Probable RNA and SrmB- binding site of polymerase A BF28_RS23115 PF01743 Poly A polymerase head domain BF28_RS23120 PF13439 Glycosyltransferase Family 4 BF28_RS23120 PF00534 Glycosyl transferases group 1 BF28_RS23125 PF02585 GlcNAc-PI de-N-acetylase BF28_RS23130 PF02142 MGS-like domain BF28_RS23135 PF01113 Dihydrodipicolinate reductase, N-terminus BF28_RS23135 PF05173 Dihydrodipicolinate reductase, C-terminus BF28_RS23140 PF03819 MazG nucleotide pyrophosphohydrolase domain BF28_RS23150 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF28_RS23150 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS23160 PF04298 Putative neutral zinc metallopeptidase BF28_RS23165 PF09577 Sporulation protein YpjB (SpoYpjB) BF28_RS23175 PF07187 Protein of unknown function (DUF1405) BF28_RS23180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF28_RS23180 PF00032 Cytochrome b(C-terminal)/b6/petD BF28_RS23185 PF00033 Cytochrome b/b6/petB BF28_RS23190 PF00355 Rieske [2Fe-2S] domain BF28_RS23195 PF10673 Protein of unknown function (DUF2487) BF28_RS23200 PF08858 IDEAL domain BF28_RS23200 PF08864 UPF0302 domain BF28_RS23210 PF00155 Aminotransferase class I and II BF28_RS23215 PF01761 3-dehydroquinate synthase BF28_RS23220 PF01264 Chorismate synthase BF28_RS23225 PF00334 Nucleoside diphosphate kinase BF28_RS23230 PF00348 Polyprenyl synthetase BF28_RS23235 PF01209 ubiE/COQ5 methyltransferase family BF28_RS23240 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BF28_RS23245 PF01227 GTP cyclohydrolase I BF28_RS23250 PF00216 Bacterial DNA-binding protein BF28_RS23255 PF09547 Stage IV sporulation protein A (spore_IV_A) BF28_RS23265 PF10966 Protein of unknown function (DUF2768) BF28_RS23275 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BF28_RS23275 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BF28_RS23280 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BF28_RS23280 PF01926 50S ribosome-binding GTPase BF28_RS23290 PF14045 YIEGIA protein BF28_RS23300 PF14140 YpzI-like protein BF28_RS23305 PF01070 FMN-dependent dehydrogenase BF28_RS23310 PF00575 S1 RNA binding domain BF28_RS23315 PF02224 Cytidylate kinase BF28_RS23325 PF00710 Asparaginase, N-terminal BF28_RS23325 PF17763 Glutaminase/Asparaginase C-terminal domain BF28_RS23350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF28_RS23350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF28_RS23355 PF05389 Negative regulator of genetic competence (MecA) BF28_RS23360 PF02607 B12 binding domain BF28_RS23360 PF13411 MerR HTH family regulatory protein BF28_RS23360 PF02310 B12 binding domain BF28_RS23365 PF00149 Calcineurin-like phosphoesterase BF28_RS23375 PF02517 CPBP intramembrane metalloprotease BF28_RS23380 PF00270 DEAD/DEAH box helicase BF28_RS23380 PF00271 Helicase conserved C-terminal domain BF28_RS23395 PF12822 ECF transporter, substrate-specific component BF28_RS23405 PF01551 Peptidase family M23 BF28_RS23410 PF01923 Cobalamin adenosyltransferase BF28_RS23415 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS23415 PF18698 Histidine kinase sensor domain BF28_RS23415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS23415 PF00989 PAS fold BF28_RS23415 PF00672 HAMP domain BF28_RS23420 PF00486 Transcriptional regulatory protein, C terminal BF28_RS23420 PF00072 Response regulator receiver domain BF28_RS23425 PF01578 Cytochrome C assembly protein BF28_RS23430 PF05140 ResB-like family BF28_RS23435 PF00578 AhpC/TSA family BF28_RS23440 PF01479 S4 domain BF28_RS23440 PF00849 RNA pseudouridylate synthase BF28_RS23445 PF07670 Nucleoside recognition BF28_RS23450 PF07670 Nucleoside recognition BF28_RS23455 PF07943 Penicillin-binding protein 5, C-terminal domain BF28_RS23455 PF00768 D-alanyl-D-alanine carboxypeptidase BF28_RS23460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF28_RS23460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF28_RS23475 PF03706 Lysylphosphatidylglycerol synthase TM region BF28_RS23475 PF09924 Uncharacterised conserved protein (DUF2156) BF28_RS23490 PF01048 Phosphorylase superfamily BF28_RS23495 PF16736 Single Cache-like BF28_RS23495 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS23495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS23495 PF00989 PAS fold BF28_RS23500 PF00589 Phage integrase family BF28_RS23510 PF01904 Protein of unknown function DUF72 BF28_RS23515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS23515 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS23515 PF00989 PAS fold BF28_RS23530 PF00912 Transglycosylase BF28_RS23530 PF00905 Penicillin binding protein transpeptidase domain BF28_RS23535 PF01865 Protein of unknown function DUF47 BF28_RS23540 PF01384 Phosphate transporter family BF28_RS23545 PF01925 Sulfite exporter TauE/SafE BF28_RS23565 PF00970 Oxidoreductase FAD-binding domain BF28_RS23565 PF00042 Globin BF28_RS23565 PF00175 Oxidoreductase NAD-binding domain BF28_RS23590 PF08241 Methyltransferase domain BF28_RS23600 PF05525 Branched-chain amino acid transport protein BF28_RS23610 PF00072 Response regulator receiver domain BF28_RS23610 PF00196 Bacterial regulatory proteins, luxR family BF28_RS23615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS23615 PF07730 Histidine kinase BF28_RS23615 PF00672 HAMP domain BF28_RS23620 PF09922 Cell wall-active antibiotics response 4TMS YvqF BF28_RS23635 PF03553 Na+/H+ antiporter family BF28_RS23645 PF00375 Sodium:dicarboxylate symporter family BF28_RS23655 PF00209 Sodium:neurotransmitter symporter family BF28_RS23670 PF01903 CbiX BF28_RS23675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF28_RS23685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF28_RS23685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF28_RS23695 PF01747 ATP-sulfurylase BF28_RS23695 PF14306 PUA-like domain BF28_RS23700 PF01507 Phosphoadenosine phosphosulfate reductase family BF28_RS23710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BF28_RS23710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BF28_RS23720 PF00884 Sulfatase BF28_RS23725 PF01066 CDP-alcohol phosphatidyltransferase BF28_RS23730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF28_RS23730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF28_RS23740 PF02811 PHP domain BF28_RS23745 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BF28_RS23750 PF01502 Phosphoribosyl-AMP cyclohydrolase BF28_RS23755 PF00977 Histidine biosynthesis protein BF28_RS23760 PF00977 Histidine biosynthesis protein BF28_RS23765 PF00117 Glutamine amidotransferase class-I BF28_RS23770 PF00475 Imidazoleglycerol-phosphate dehydratase BF28_RS23775 PF00815 Histidinol dehydrogenase BF28_RS23780 PF01634 ATP phosphoribosyltransferase BF28_RS23785 PF13393 Histidyl-tRNA synthetase BF28_RS23790 PF00694 Aconitase C-terminal domain BF28_RS23795 PF00330 Aconitase family (aconitate hydratase) BF28_RS23800 PF00180 Isocitrate/isopropylmalate dehydrogenase BF28_RS23805 PF00682 HMGL-like BF28_RS23805 PF08502 LeuA allosteric (dimerisation) domain BF28_RS23810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF28_RS23810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF28_RS23815 PF01842 ACT domain BF28_RS23815 PF10369 Small subunit of acetolactate synthase BF28_RS23820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF28_RS23820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF28_RS23820 PF00205 Thiamine pyrophosphate enzyme, central domain BF28_RS23825 PF01063 Amino-transferase class IV BF28_RS23840 PF03698 Uncharacterised protein family (UPF0180) BF28_RS23855 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF28_RS23865 PF02386 Cation transport protein BF28_RS23870 PF00375 Sodium:dicarboxylate symporter family BF28_RS23880 PF01047 MarR family BF28_RS23895 PF02673 Bacitracin resistance protein BacA BF28_RS23900 PF01554 MatE BF28_RS23920 PF01636 Phosphotransferase enzyme family BF28_RS23935 PF00258 Flavodoxin BF28_RS23945 PF01546 Peptidase family M20/M25/M40 BF28_RS23945 PF07687 Peptidase dimerisation domain BF28_RS23955 PF13193 AMP-binding enzyme C-terminal domain BF28_RS23955 PF00501 AMP-binding enzyme BF28_RS23960 PF03062 MBOAT, membrane-bound O-acyltransferase family BF28_RS23965 PF00550 Phosphopantetheine attachment site BF28_RS23970 PF04914 DltD protein BF28_RS23975 PF03060 Nitronate monooxygenase BF28_RS23980 PF17676 LD-carboxypeptidase C-terminal domain BF28_RS23980 PF02016 LD-carboxypeptidase N-terminal domain BF28_RS23990 PF00857 Isochorismatase family BF28_RS24000 PF01037 Lrp/AsnC ligand binding domain BF28_RS24010 PF02517 CPBP intramembrane metalloprotease BF28_RS24020 PF00005 ABC transporter BF28_RS24030 PF00005 ABC transporter BF28_RS24035 PF00392 Bacterial regulatory proteins, gntR family BF28_RS24040 PF00268 Ribonucleotide reductase, small chain BF28_RS24045 PF08343 Ribonucleotide reductase N-terminal BF28_RS24045 PF02867 Ribonucleotide reductase, barrel domain BF28_RS24045 PF00317 Ribonucleotide reductase, all-alpha domain BF28_RS24050 PF02867 Ribonucleotide reductase, barrel domain BF28_RS24050 PF00317 Ribonucleotide reductase, all-alpha domain BF28_RS24050 PF08343 Ribonucleotide reductase N-terminal BF28_RS24055 PF07972 NrdI Flavodoxin like BF28_RS24095 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BF28_RS24100 PF14489 QueF-like protein BF28_RS24105 PF04055 Radical SAM superfamily BF28_RS24110 PF01242 6-pyruvoyl tetrahydropterin synthase BF28_RS24115 PF06508 Queuosine biosynthesis protein QueC BF28_RS24120 PF13426 PAS domain BF28_RS24120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS24120 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS24120 PF13188 PAS domain BF28_RS24120 PF00989 PAS fold BF28_RS24130 PF12867 DinB superfamily BF28_RS24140 PF01047 MarR family BF28_RS24145 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS24145 PF02743 Cache domain BF28_RS24145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS24150 PF09388 Spo0E like sporulation regulatory protein BF28_RS24155 PF04748 Divergent polysaccharide deacetylase BF28_RS24165 PF00596 Class II Aldolase and Adducin N-terminal domain BF28_RS24170 PF01520 N-acetylmuramoyl-L-alanine amidase BF28_RS24170 PF00395 S-layer homology domain BF28_RS24180 PF08220 DeoR-like helix-turn-helix domain BF28_RS24180 PF00455 DeoR C terminal sensor domain BF28_RS24190 PF00266 Aminotransferase class-V BF28_RS24195 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS24200 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS24205 PF00005 ABC transporter BF28_RS24205 PF08402 TOBE domain BF28_RS24225 PF02386 Cation transport protein BF28_RS24235 PF00561 alpha/beta hydrolase fold BF28_RS24260 PF01575 MaoC like domain BF28_RS24265 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF28_RS24270 PF02386 Cation transport protein BF28_RS24275 PF03741 Integral membrane protein TerC family BF28_RS24280 PF01226 Formate/nitrite transporter BF28_RS24290 PF01478 Type IV leader peptidase family BF28_RS24290 PF06750 Bacterial Peptidase A24 N-terminal domain BF28_RS24295 PF02589 LUD domain BF28_RS24300 PF02589 LUD domain BF28_RS24300 PF11870 Domain of unknown function (DUF3390) BF28_RS24300 PF13183 4Fe-4S dicluster domain BF28_RS24305 PF02754 Cysteine-rich domain BF28_RS24310 PF00392 Bacterial regulatory proteins, gntR family BF28_RS24310 PF07729 FCD domain BF28_RS24315 PF00989 PAS fold BF28_RS24315 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS24315 PF00672 HAMP domain BF28_RS24315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS24315 PF18698 Histidine kinase sensor domain BF28_RS24320 PF00486 Transcriptional regulatory protein, C terminal BF28_RS24320 PF00072 Response regulator receiver domain BF28_RS24330 PF13556 PucR C-terminal helix-turn-helix domain BF28_RS24330 PF17853 GGDEF-like domain BF28_RS24330 PF05651 Putative sugar diacid recognition BF28_RS24335 PF02913 FAD linked oxidases, C-terminal domain BF28_RS24335 PF01565 FAD binding domain BF28_RS24340 PF13183 4Fe-4S dicluster domain BF28_RS24340 PF02754 Cysteine-rich domain BF28_RS24345 PF00188 Cysteine-rich secretory protein family BF28_RS24355 PF00849 RNA pseudouridylate synthase BF28_RS24355 PF01479 S4 domain BF28_RS24365 PF03176 MMPL family BF28_RS24375 PF13416 Bacterial extracellular solute-binding protein BF28_RS24380 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS24385 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS24390 PF00005 ABC transporter BF28_RS24390 PF08402 TOBE domain BF28_RS24395 PF00171 Aldehyde dehydrogenase family BF28_RS24400 PF05547 Immune inhibitor A peptidase M6 BF28_RS24410 PF08671 Anti-repressor SinI BF28_RS24410 PF01381 Helix-turn-helix BF28_RS24415 PF12389 Camelysin metallo-endopeptidase BF28_RS24425 PF12389 Camelysin metallo-endopeptidase BF28_RS24435 PF00768 D-alanyl-D-alanine carboxypeptidase BF28_RS24435 PF07943 Penicillin-binding protein 5, C-terminal domain BF28_RS24445 PF13649 Methyltransferase domain BF28_RS24535 PF01381 Helix-turn-helix BF28_RS24540 PF02779 Transketolase, pyrimidine binding domain BF28_RS24540 PF00676 Dehydrogenase E1 component BF28_RS24540 PF16870 2-oxoglutarate dehydrogenase C-terminal BF28_RS24545 PF02817 e3 binding domain BF28_RS24545 PF00364 Biotin-requiring enzyme BF28_RS24545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF28_RS24565 PF01209 ubiE/COQ5 methyltransferase family BF28_RS24580 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS24580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF28_RS24600 PF10042 Uncharacterized conserved protein (DUF2278) BF28_RS24605 PF02652 L-lactate permease BF28_RS24615 PF00290 Tryptophan synthase alpha chain BF28_RS24620 PF00291 Pyridoxal-phosphate dependent enzyme BF28_RS24625 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BF28_RS24630 PF00218 Indole-3-glycerol phosphate synthase BF28_RS24635 PF02885 Glycosyl transferase family, helical bundle domain BF28_RS24635 PF00591 Glycosyl transferase family, a/b domain BF28_RS24640 PF00117 Glutamine amidotransferase class-I BF28_RS24640 PF02885 Glycosyl transferase family, helical bundle domain BF28_RS24640 PF00591 Glycosyl transferase family, a/b domain BF28_RS24645 PF04715 Anthranilate synthase component I, N terminal region BF28_RS24645 PF00425 chorismate binding enzyme BF28_RS24655 PF00474 Sodium:solute symporter family BF28_RS24660 PF02368 Bacterial Ig-like domain (group 2) BF28_RS24675 PF00756 Putative esterase BF28_RS24685 PF13673 Acetyltransferase (GNAT) domain BF28_RS24690 PF00580 UvrD/REP helicase N-terminal domain BF28_RS24690 PF13361 UvrD-like helicase C-terminal domain BF28_RS24710 PF07098 Protein of unknown function (DUF1360) BF28_RS24730 PF04321 RmlD substrate binding domain BF28_RS24735 PF16363 GDP-mannose 4,6 dehydratase BF28_RS24740 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BF28_RS24745 PF00483 Nucleotidyl transferase BF28_RS24765 PF13181 Tetratricopeptide repeat BF28_RS24765 PF00535 Glycosyl transferase family 2 BF28_RS24775 PF05711 Macrocin-O-methyltransferase (TylF) BF28_RS24780 PF08241 Methyltransferase domain BF28_RS24785 PF00535 Glycosyl transferase family 2 BF28_RS24790 PF01098 Cell cycle protein BF28_RS24795 PF00149 Calcineurin-like phosphoesterase BF28_RS24805 PF00849 RNA pseudouridylate synthase BF28_RS24810 PF01513 ATP-NAD kinase BF28_RS24815 PF04607 Region found in RelA / SpoT proteins BF28_RS24825 PF01928 CYTH domain BF28_RS24830 PF01152 Bacterial-like globin BF28_RS24845 PF08439 Oligopeptidase F BF28_RS24845 PF01432 Peptidase family M3 BF28_RS24855 PF13396 Phospholipase_D-nuclease N-terminal BF28_RS24855 PF13091 PLD-like domain BF28_RS24860 PF05389 Negative regulator of genetic competence (MecA) BF28_RS24865 PF03741 Integral membrane protein TerC family BF28_RS24870 PF03960 ArsC family BF28_RS24885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS24890 PF01554 MatE BF28_RS24895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS24895 PF00005 ABC transporter BF28_RS24900 PF00005 ABC transporter BF28_RS24900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS24905 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS24905 PF12911 N-terminal TM domain of oligopeptide transport permease C BF28_RS24910 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS24915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS24925 PF00579 tRNA synthetases class I (W and Y) BF28_RS24930 PF12227 Protein of unknown function (DUF3603) BF28_RS24935 PF10026 Predicted Zn-dependent protease (DUF2268) BF28_RS24940 PF00109 Beta-ketoacyl synthase, N-terminal domain BF28_RS24940 PF02801 Beta-ketoacyl synthase, C-terminal domain BF28_RS24945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF28_RS24945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF28_RS24950 PF10815 ComZ BF28_RS24970 PF00004 ATPase family associated with various cellular activities (AAA) BF28_RS24970 PF02861 Clp amino terminal domain, pathogenicity island component BF28_RS24970 PF10431 C-terminal, D2-small domain, of ClpB protein BF28_RS24970 PF07724 AAA domain (Cdc48 subfamily) BF28_RS24970 PF17871 AAA lid domain BF28_RS24975 PF14168 YjzC-like protein BF28_RS24995 PF12758 Protein of unknown function (DUF3813) BF28_RS25000 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF28_RS25000 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS25010 PF00639 PPIC-type PPIASE domain BF28_RS25015 PF13509 S1 domain BF28_RS25015 PF17783 CvfB-like winged helix domain BF28_RS25020 PF04461 Protein of unknown function (DUF520) BF28_RS25030 PF00128 Alpha amylase, catalytic domain BF28_RS25040 PF00909 Ammonium Transporter Family BF28_RS25045 PF06628 Catalase-related immune-responsive BF28_RS25045 PF00199 Catalase BF28_RS25050 PF00762 Ferrochelatase BF28_RS25055 PF00733 Asparagine synthase BF28_RS25055 PF13537 Glutamine amidotransferase domain BF28_RS25065 PF07457 Protein of unknown function (DUF1516) BF28_RS25070 PF00202 Aminotransferase class-III BF28_RS25080 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF28_RS25085 PF09388 Spo0E like sporulation regulatory protein BF28_RS25090 PF10676 Spore germination protein gerPA/gerPF BF28_RS25095 PF10803 Spore germination GerPB BF28_RS25100 PF10737 Spore germination protein GerPC BF28_RS25110 PF10970 Spore germination protein GerPE BF28_RS25115 PF10676 Spore germination protein gerPA/gerPF BF28_RS25125 PF13361 UvrD-like helicase C-terminal domain BF28_RS25125 PF00580 UvrD/REP helicase N-terminal domain BF28_RS25125 PF12705 PD-(D/E)XK nuclease superfamily BF28_RS25130 PF12705 PD-(D/E)XK nuclease superfamily BF28_RS25130 PF13361 UvrD-like helicase C-terminal domain BF28_RS25135 PF10502 Signal peptidase, peptidase S26 BF28_RS25140 PF09335 SNARE associated Golgi protein BF28_RS25145 PF06338 ComK protein BF28_RS25160 PF00313 'Cold-shock' DNA-binding domain BF28_RS25170 PF00463 Isocitrate lyase family BF28_RS25175 PF01274 Malate synthase BF28_RS25180 PF00395 S-layer homology domain BF28_RS25190 PF00395 S-layer homology domain BF28_RS25190 PF03424 Carbohydrate binding domain (family 17/28) BF28_RS25190 PF00150 Cellulase (glycosyl hydrolase family 5) BF28_RS25195 PF00892 EamA-like transporter family BF28_RS25200 PF00672 HAMP domain BF28_RS25200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS25200 PF02743 Cache domain BF28_RS25205 PF16491 CAAX prenyl protease N-terminal, five membrane helices BF28_RS25205 PF01435 Peptidase family M48 BF28_RS25230 PF00486 Transcriptional regulatory protein, C terminal BF28_RS25230 PF00072 Response regulator receiver domain BF28_RS25235 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS25235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS25250 PF12833 Helix-turn-helix domain BF28_RS25250 PF06445 GyrI-like small molecule binding domain BF28_RS25255 PF04542 Sigma-70 region 2 BF28_RS25255 PF08281 Sigma-70, region 4 BF28_RS25265 PF01966 HD domain BF28_RS25270 PF00149 Calcineurin-like phosphoesterase BF28_RS25275 PF07968 Leukocidin/Hemolysin toxin family BF28_RS25280 PF00395 S-layer homology domain BF28_RS25280 PF01520 N-acetylmuramoyl-L-alanine amidase BF28_RS25290 PF13193 AMP-binding enzyme C-terminal domain BF28_RS25290 PF00501 AMP-binding enzyme BF28_RS25300 PF03099 Biotin/lipoate A/B protein ligase family BF28_RS25300 PF10437 Bacterial lipoate protein ligase C-terminus BF28_RS25305 PF12706 Beta-lactamase superfamily domain BF28_RS25310 PF14149 YhfH-like protein BF28_RS25315 PF00356 Bacterial regulatory proteins, lacI family BF28_RS25320 PF13280 WYL domain BF28_RS25320 PF08279 HTH domain BF28_RS25330 PF13302 Acetyltransferase (GNAT) domain BF28_RS25350 PF00440 Bacterial regulatory proteins, tetR family BF28_RS25350 PF17932 Tetracyclin repressor-like, C-terminal domain BF28_RS25360 PF03965 Penicillinase repressor BF28_RS25385 PF01593 Flavin containing amine oxidoreductase BF28_RS25390 PF00762 Ferrochelatase BF28_RS25395 PF01208 Uroporphyrinogen decarboxylase (URO-D) BF28_RS25400 PF00905 Penicillin binding protein transpeptidase domain BF28_RS25400 PF00912 Transglycosylase BF28_RS25405 PF03992 Antibiotic biosynthesis monooxygenase BF28_RS25410 PF03703 Bacterial PH domain BF28_RS25415 PF03703 Bacterial PH domain BF28_RS25450 PF00395 S-layer homology domain BF28_RS25450 PF01520 N-acetylmuramoyl-L-alanine amidase BF28_RS25460 PF03703 Bacterial PH domain BF28_RS25465 PF03703 Bacterial PH domain BF28_RS25475 PF00440 Bacterial regulatory proteins, tetR family BF28_RS25475 PF17934 Tetracyclin repressor-like, C-terminal domain BF28_RS25535 PF12787 EcsC protein family BF28_RS25540 PF05975 Bacterial ABC transporter protein EcsB BF28_RS25545 PF00005 ABC transporter BF28_RS25550 PF01230 HIT domain BF28_RS25555 PF12732 YtxH-like protein BF28_RS25560 PF01047 MarR family BF28_RS25585 PF13538 UvrD-like helicase C-terminal domain BF28_RS25595 PF07690 Major Facilitator Superfamily BF28_RS25600 PF07690 Major Facilitator Superfamily BF28_RS25625 PF08281 Sigma-70, region 4 BF28_RS25625 PF04542 Sigma-70 region 2 BF28_RS25640 PF01266 FAD dependent oxidoreductase BF28_RS25640 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BF28_RS25645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF28_RS25645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF28_RS25650 PF00230 Major intrinsic protein BF28_RS25655 PF04309 Glycerol-3-phosphate responsive antiterminator BF28_RS25680 PF08386 TAP-like protein BF28_RS25680 PF00561 alpha/beta hydrolase fold BF28_RS25690 PF17874 MalT-like TPR region BF28_RS25690 PF18801 response regulator aspartate phosphatase H, N terminal BF28_RS25695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS25700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS25735 PF01966 HD domain BF28_RS25735 PF01336 OB-fold nucleic acid binding domain BF28_RS25740 PF13514 AAA domain BF28_RS25745 PF00149 Calcineurin-like phosphoesterase BF28_RS25760 PF11121 Protein of unknown function (DUF2639) BF28_RS25790 PF00005 ABC transporter BF28_RS25795 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS25795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS25800 PF00486 Transcriptional regulatory protein, C terminal BF28_RS25800 PF00072 Response regulator receiver domain BF28_RS25810 PF01906 Putative heavy-metal-binding BF28_RS25835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS25835 PF00672 HAMP domain BF28_RS25835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BF28_RS25835 PF00072 Response regulator receiver domain BF28_RS25835 PF01627 Hpt domain BF28_RS25835 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS25840 PF03705 CheR methyltransferase, all-alpha domain BF28_RS25840 PF01739 CheR methyltransferase, SAM binding domain BF28_RS25845 PF07228 Stage II sporulation protein E (SpoIIE) BF28_RS25845 PF13426 PAS domain BF28_RS25855 PF04542 Sigma-70 region 2 BF28_RS25855 PF04539 Sigma-70 region 3 BF28_RS25855 PF04545 Sigma-70, region 4 BF28_RS25860 PF13581 Histidine kinase-like ATPase domain BF28_RS25865 PF01740 STAS domain BF28_RS25880 PF05532 CsbD-like BF28_RS25885 PF11181 Heat induced stress protein YflT BF28_RS25915 PF00395 S-layer homology domain BF28_RS25935 PF01966 HD domain BF28_RS25935 PF00672 HAMP domain BF28_RS25970 PF02734 DAK2 domain BF28_RS25975 PF02082 Transcriptional regulator BF28_RS25980 PF02525 Flavodoxin-like fold BF28_RS25995 PF02733 Dak1 domain BF28_RS26025 PF01066 CDP-alcohol phosphatidyltransferase BF28_RS26035 PF00232 Glycosyl hydrolase family 1 BF28_RS26040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF28_RS26040 PF00367 phosphotransferase system, EIIB BF28_RS26040 PF02378 Phosphotransferase system, EIIC BF28_RS26045 PF00874 PRD domain BF28_RS26045 PF03123 CAT RNA binding domain BF28_RS26055 PF18665 Tetracyclin repressor-like, C-terminal domain BF28_RS26055 PF00440 Bacterial regulatory proteins, tetR family BF28_RS26060 PF00550 Phosphopantetheine attachment site BF28_RS26060 PF07993 Male sterility protein BF28_RS26135 PF01925 Sulfite exporter TauE/SafE BF28_RS26145 PF00772 DnaB-like helicase N terminal domain BF28_RS26145 PF03796 DnaB-like helicase C terminal domain BF28_RS26160 PF06445 GyrI-like small molecule binding domain BF28_RS26160 PF13411 MerR HTH family regulatory protein BF28_RS26195 PF00266 Aminotransferase class-V BF28_RS26205 PF13476 AAA domain BF28_RS26215 PF05872 Bacterial protein of unknown function (DUF853) BF28_RS26260 PF02151 UvrB/uvrC motif BF28_RS26260 PF12344 Ultra-violet resistance protein B BF28_RS26260 PF00271 Helicase conserved C-terminal domain BF28_RS26260 PF17757 UvrB interaction domain BF28_RS26260 PF04851 Type III restriction enzyme, res subunit BF28_RS26280 PF01926 50S ribosome-binding GTPase BF28_RS26280 PF07650 KH domain BF28_RS26290 PF00005 ABC transporter BF28_RS26290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS26295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS26295 PF00005 ABC transporter BF28_RS26300 PF12911 N-terminal TM domain of oligopeptide transport permease C BF28_RS26300 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS26305 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS26310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS26330 PF02423 Ornithine cyclodeaminase/mu-crystallin family BF28_RS26335 PF05544 Proline racemase BF28_RS26340 PF11121 Protein of unknown function (DUF2639) BF28_RS26350 PF01520 N-acetylmuramoyl-L-alanine amidase BF28_RS26350 PF00395 S-layer homology domain BF28_RS26355 PF05343 M42 glutamyl aminopeptidase BF28_RS26375 PF00378 Enoyl-CoA hydratase/isomerase BF28_RS26390 PF03062 MBOAT, membrane-bound O-acyltransferase family BF28_RS26395 PF03062 MBOAT, membrane-bound O-acyltransferase family BF28_RS26405 PF00395 S-layer homology domain BF28_RS26410 PF02368 Bacterial Ig-like domain (group 2) BF28_RS26410 PF13205 Bacterial Ig-like domain BF28_RS26410 PF00395 S-layer homology domain BF28_RS26420 PF01943 Polysaccharide biosynthesis protein BF28_RS26420 PF14667 Polysaccharide biosynthesis C-terminal domain BF28_RS26425 PF07517 SecA DEAD-like domain BF28_RS26425 PF07516 SecA Wing and Scaffold domain BF28_RS26425 PF01043 SecA preprotein cross-linking domain BF28_RS26450 PF01740 STAS domain BF28_RS26450 PF00916 Sulfate permease family BF28_RS26460 PF13193 AMP-binding enzyme C-terminal domain BF28_RS26460 PF00501 AMP-binding enzyme BF28_RS26465 PF04055 Radical SAM superfamily BF28_RS26470 PF01510 N-acetylmuramoyl-L-alanine amidase BF28_RS26470 PF01471 Putative peptidoglycan binding domain BF28_RS26485 PF02245 Methylpurine-DNA glycosylase (MPG) BF28_RS26490 PF03306 Alpha-acetolactate decarboxylase BF28_RS26495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF28_RS26495 PF00205 Thiamine pyrophosphate enzyme, central domain BF28_RS26495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF28_RS26535 PF00196 Bacterial regulatory proteins, luxR family BF28_RS26535 PF00072 Response regulator receiver domain BF28_RS26540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS26540 PF07730 Histidine kinase BF28_RS26550 PF06133 Control of competence regulator ComK, YlbF/YmcA BF28_RS26555 PF04286 Protein of unknown function (DUF445) BF28_RS26565 PF14398 YheC/D like ATP-grasp BF28_RS26575 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF28_RS26580 PF00005 ABC transporter BF28_RS26585 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS26590 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF28_RS26595 PF00664 ABC transporter transmembrane region BF28_RS26595 PF00005 ABC transporter BF28_RS26600 PF00005 ABC transporter BF28_RS26600 PF00664 ABC transporter transmembrane region BF28_RS26610 PF00171 Aldehyde dehydrogenase family BF28_RS26615 PF13520 Amino acid permease BF28_RS26625 PF06628 Catalase-related immune-responsive BF28_RS26625 PF00199 Catalase BF28_RS26625 PF18011 C-terminal domain found in long catalases BF28_RS26630 PF01965 DJ-1/PfpI family BF28_RS26640 PF07690 Major Facilitator Superfamily BF28_RS26645 PF12793 Sugar transport-related sRNA regulator N-term BF28_RS26645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS26650 PF02525 Flavodoxin-like fold BF28_RS26660 PF01638 HxlR-like helix-turn-helix BF28_RS26665 PF00107 Zinc-binding dehydrogenase BF28_RS26665 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS26675 PF00067 Cytochrome P450 BF28_RS26680 PF17922 Tetracyclin repressor-like, C-terminal domain BF28_RS26680 PF00440 Bacterial regulatory proteins, tetR family BF28_RS26685 PF07859 alpha/beta hydrolase fold BF28_RS26690 PF07690 Major Facilitator Superfamily BF28_RS26695 PF01494 FAD binding domain BF28_RS26700 PF01047 MarR family BF28_RS26710 PF07690 Major Facilitator Superfamily BF28_RS26715 PF17934 Tetracyclin repressor-like, C-terminal domain BF28_RS26715 PF00440 Bacterial regulatory proteins, tetR family BF28_RS26720 PF00893 Small Multidrug Resistance protein BF28_RS26725 PF00893 Small Multidrug Resistance protein BF28_RS26735 PF01037 Lrp/AsnC ligand binding domain BF28_RS26740 PF00892 EamA-like transporter family BF28_RS26755 PF07681 DoxX BF28_RS26775 PF01380 SIS domain BF28_RS26780 PF01418 Helix-turn-helix domain, rpiR family BF28_RS26780 PF01380 SIS domain BF28_RS26790 PF00999 Sodium/hydrogen exchanger family BF28_RS26795 PF13520 Amino acid permease BF28_RS26830 PF09335 SNARE associated Golgi protein BF28_RS26840 PF02735 Ku70/Ku80 beta-barrel domain BF28_RS26855 PF11007 Spore coat associated protein JA (CotJA) BF28_RS26860 PF12652 CotJB protein BF28_RS26865 PF05067 Manganese containing catalase BF28_RS26870 PF05525 Branched-chain amino acid transport protein BF28_RS26875 PF02687 FtsX-like permease family BF28_RS26890 PF09529 Integral membrane protein (intg_mem_TP0381) BF28_RS26900 PF00005 ABC transporter BF28_RS26905 PF02687 FtsX-like permease family BF28_RS26905 PF12704 MacB-like periplasmic core domain BF28_RS26910 PF01476 LysM domain BF28_RS26910 PF06725 3D domain BF28_RS26925 PF02378 Phosphotransferase system, EIIC BF28_RS26930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF28_RS26935 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF28_RS26940 PF08279 HTH domain BF28_RS26940 PF05043 Mga helix-turn-helix domain BF28_RS26940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF28_RS26940 PF00874 PRD domain BF28_RS26950 PF07690 Major Facilitator Superfamily BF28_RS26955 PF02690 Na+/Pi-cotransporter BF28_RS26960 PF00107 Zinc-binding dehydrogenase BF28_RS26960 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS26965 PF03816 Cell envelope-related transcriptional attenuator domain BF28_RS26975 PF01925 Sulfite exporter TauE/SafE BF28_RS26980 PF13686 DsrE/DsrF/DrsH-like family BF28_RS26990 PF00581 Rhodanese-like domain BF28_RS26995 PF01206 Sulfurtransferase TusA BF28_RS27000 PF00753 Metallo-beta-lactamase superfamily BF28_RS27000 PF00581 Rhodanese-like domain BF28_RS27005 PF01206 Sulfurtransferase TusA BF28_RS27005 PF00581 Rhodanese-like domain BF28_RS27010 PF02583 Metal-sensitive transcriptional repressor BF28_RS27015 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS27015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF28_RS27025 PF04293 SpoVR like protein BF28_RS27030 PF00881 Nitroreductase family BF28_RS27040 PF03323 Bacillus/Clostridium GerA spore germination protein BF28_RS27050 PF03845 Spore germination protein BF28_RS27060 PF14148 YhdB-like protein BF28_RS27065 PF02600 Disulfide bond formation protein DsbB BF28_RS27070 PF00085 Thioredoxin BF28_RS27085 PF03734 L,D-transpeptidase catalytic domain BF28_RS27085 PF17969 L,D-transpeptidase C-terminal domain BF28_RS27095 PF00860 Permease family BF28_RS27110 PF01047 MarR family BF28_RS27115 PF07690 Major Facilitator Superfamily BF28_RS27120 PF02702 Osmosensitive K+ channel His kinase sensor domain BF28_RS27125 PF02669 K+-transporting ATPase, c chain BF28_RS27135 PF03814 Potassium-transporting ATPase A subunit BF28_RS27160 PF08543 Phosphomethylpyrimidine kinase BF28_RS27165 PF00899 ThiF family BF28_RS27170 PF05690 Thiazole biosynthesis protein ThiG BF28_RS27175 PF02597 ThiS family BF28_RS27180 PF01266 FAD dependent oxidoreductase BF28_RS27185 PF02581 Thiamine monophosphate synthase BF28_RS27190 PF09084 NMT1/THI5 like BF28_RS27195 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS27200 PF00005 ABC transporter BF28_RS27205 PF03070 TENA/THI-4/PQQC family BF28_RS27210 PF00246 Zinc carboxypeptidase BF28_RS27210 PF08239 Bacterial SH3 domain BF28_RS27230 PF00571 CBS domain BF28_RS27350 PF00873 AcrB/AcrD/AcrF family BF28_RS27360 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS27365 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS27370 PF12849 PBP superfamily domain BF28_RS27375 PF02421 Ferrous iron transport protein B BF28_RS27375 PF07670 Nucleoside recognition BF28_RS27375 PF17910 FeoB cytosolic helical domain BF28_RS27375 PF04023 FeoA domain BF28_RS27375 PF07664 Ferrous iron transport protein B C terminus BF28_RS27380 PF07664 Ferrous iron transport protein B C terminus BF28_RS27380 PF02421 Ferrous iron transport protein B BF28_RS27380 PF07670 Nucleoside recognition BF28_RS27380 PF17910 FeoB cytosolic helical domain BF28_RS27385 PF02421 Ferrous iron transport protein B BF28_RS27385 PF07670 Nucleoside recognition BF28_RS27385 PF07664 Ferrous iron transport protein B C terminus BF28_RS27385 PF17910 FeoB cytosolic helical domain BF28_RS27395 PF05504 Spore germination B3/ GerAC like, C-terminal BF28_RS27400 PF03845 Spore germination protein BF28_RS27405 PF03323 Bacillus/Clostridium GerA spore germination protein BF28_RS27410 PF00474 Sodium:solute symporter family BF28_RS27415 PF11755 Protein of unknown function (DUF3311) BF28_RS27420 PF07687 Peptidase dimerisation domain BF28_RS27420 PF01546 Peptidase family M20/M25/M40 BF28_RS27425 PF13529 Peptidase_C39 like family BF28_RS27430 PF00324 Amino acid permease BF28_RS27435 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BF28_RS27440 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF28_RS27445 PF00510 Cytochrome c oxidase subunit III BF28_RS27455 PF02080 TrkA-C domain BF28_RS27455 PF02254 TrkA-N domain BF28_RS27455 PF00999 Sodium/hydrogen exchanger family BF28_RS27465 PF13673 Acetyltransferase (GNAT) domain BF28_RS27480 PF00860 Permease family BF28_RS27485 PF00324 Amino acid permease BF28_RS27500 PF05525 Branched-chain amino acid transport protein BF28_RS27505 PF00854 POT family BF28_RS27510 PF04203 Sortase domain BF28_RS27520 PF01381 Helix-turn-helix BF28_RS27525 PF01476 LysM domain BF28_RS27525 PF06725 3D domain BF28_RS27530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS27530 PF00672 HAMP domain BF28_RS27530 PF02743 Cache domain BF28_RS27535 PF02673 Bacitracin resistance protein BacA BF28_RS27560 PF03372 Endonuclease/Exonuclease/phosphatase family BF28_RS27565 PF00882 Zinc dependent phospholipase C BF28_RS27585 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS27585 PF00107 Zinc-binding dehydrogenase BF28_RS27600 PF05547 Immune inhibitor A peptidase M6 BF28_RS27605 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF28_RS27610 PF13407 Periplasmic binding protein domain BF28_RS27615 PF02653 Branched-chain amino acid transport system / permease component BF28_RS27620 PF00005 ABC transporter BF28_RS27625 PF05025 RbsD / FucU transport protein family BF28_RS27630 PF00294 pfkB family carbohydrate kinase BF28_RS27635 PF00356 Bacterial regulatory proteins, lacI family BF28_RS27640 PF07690 Major Facilitator Superfamily BF28_RS27645 PF01047 MarR family BF28_RS27650 PF07690 Major Facilitator Superfamily BF28_RS27655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS27655 PF00005 ABC transporter BF28_RS27660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS27660 PF00005 ABC transporter BF28_RS27665 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS27670 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS27675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS27685 PF00582 Universal stress protein family BF28_RS27690 PF01740 STAS domain BF28_RS27690 PF00916 Sulfate permease family BF28_RS27700 PF00486 Transcriptional regulatory protein, C terminal BF28_RS27700 PF00072 Response regulator receiver domain BF28_RS27705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS27705 PF00989 PAS fold BF28_RS27705 PF00672 HAMP domain BF28_RS27705 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS27705 PF18698 Histidine kinase sensor domain BF28_RS27710 PF01872 RibD C-terminal domain BF28_RS27715 PF08279 HTH domain BF28_RS27715 PF13280 WYL domain BF28_RS27740 PF00324 Amino acid permease BF28_RS27745 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS27750 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS27755 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF28_RS27760 PF00005 ABC transporter BF28_RS27765 PF01235 Sodium:alanine symporter family BF28_RS27770 PF01636 Phosphotransferase enzyme family BF28_RS27780 PF03323 Bacillus/Clostridium GerA spore germination protein BF28_RS27795 PF00128 Alpha amylase, catalytic domain BF28_RS27795 PF16657 Maltogenic Amylase, C-terminal domain BF28_RS27800 PF02378 Phosphotransferase system, EIIC BF28_RS27800 PF00367 phosphotransferase system, EIIB BF28_RS27805 PF07702 UTRA domain BF28_RS27805 PF00392 Bacterial regulatory proteins, gntR family BF28_RS27810 PF13520 Amino acid permease BF28_RS27815 PF00990 Diguanylate cyclase, GGDEF domain BF28_RS27815 PF03707 Bacterial signalling protein N terminal repeat BF28_RS27815 PF00563 EAL domain BF28_RS27830 PF13091 PLD-like domain BF28_RS27830 PF13396 Phospholipase_D-nuclease N-terminal BF28_RS27835 PF07728 AAA domain (dynein-related subfamily) BF28_RS27840 PF00092 von Willebrand factor type A domain BF28_RS27845 PF13344 Haloacid dehalogenase-like hydrolase BF28_RS27845 PF00293 NUDIX domain BF28_RS27850 PF00156 Phosphoribosyl transferase domain BF28_RS27855 PF01370 NAD dependent epimerase/dehydratase family BF28_RS27860 PF00155 Aminotransferase class I and II BF28_RS27865 PF08241 Methyltransferase domain BF28_RS27870 PF00005 ABC transporter BF28_RS27875 PF01032 FecCD transport family BF28_RS27880 PF01032 FecCD transport family BF28_RS27885 PF01497 Periplasmic binding protein BF28_RS27890 PF00854 POT family BF28_RS27895 PF08141 Small acid-soluble spore protein H family BF28_RS27900 PF01022 Bacterial regulatory protein, arsR family BF28_RS27905 PF02652 L-lactate permease BF28_RS27910 PF10415 Fumarase C C-terminus BF28_RS27910 PF00206 Lyase BF28_RS27915 PF03471 Transporter associated domain BF28_RS27915 PF00571 CBS domain BF28_RS27915 PF01595 Cyclin M transmembrane N-terminal domain BF28_RS27920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS27925 PF01773 Na+ dependent nucleoside transporter N-terminus BF28_RS27925 PF07662 Na+ dependent nucleoside transporter C-terminus BF28_RS27930 PF03816 Cell envelope-related transcriptional attenuator domain BF28_RS27935 PF04294 VanW like protein BF28_RS27955 PF03413 Peptidase propeptide and YPEB domain BF28_RS27955 PF07504 Fungalysin/Thermolysin Propeptide Motif BF28_RS27955 PF01447 Thermolysin metallopeptidase, catalytic domain BF28_RS27955 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF28_RS27965 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BF28_RS27965 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BF28_RS27965 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BF28_RS27970 PF00403 Heavy-metal-associated domain BF28_RS27975 PF01022 Bacterial regulatory protein, arsR family BF28_RS27980 PF13520 Amino acid permease BF28_RS27985 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF28_RS27985 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF28_RS27995 PF07849 Protein of unknown function (DUF1641) BF28_RS28000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF28_RS28000 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF28_RS28000 PF01568 Molydopterin dinucleotide binding domain BF28_RS28000 PF00384 Molybdopterin oxidoreductase BF28_RS28000 PF00037 4Fe-4S binding domain BF28_RS28005 PF02634 FdhD/NarQ family BF28_RS28010 PF00583 Acetyltransferase (GNAT) family BF28_RS28010 PF13508 Acetyltransferase (GNAT) domain BF28_RS28020 PF00072 Response regulator receiver domain BF28_RS28020 PF00486 Transcriptional regulatory protein, C terminal BF28_RS28025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS28025 PF18698 Histidine kinase sensor domain BF28_RS28025 PF00672 HAMP domain BF28_RS28025 PF00989 PAS fold BF28_RS28025 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS28035 PF00155 Aminotransferase class I and II BF28_RS28035 PF00392 Bacterial regulatory proteins, gntR family BF28_RS28040 PF00892 EamA-like transporter family BF28_RS28050 PF03949 Malic enzyme, NAD binding domain BF28_RS28050 PF00390 Malic enzyme, N-terminal domain BF28_RS28055 PF03390 2-hydroxycarboxylate transporter family BF28_RS28060 PF00072 Response regulator receiver domain BF28_RS28065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS28065 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF28_RS28065 PF17203 Single cache domain 3 BF28_RS28065 PF00989 PAS fold BF28_RS28070 PF02743 Cache domain BF28_RS28070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS28070 PF00672 HAMP domain BF28_RS28075 PF13529 Peptidase_C39 like family BF28_RS28085 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS28085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS28090 PF00072 Response regulator receiver domain BF28_RS28090 PF00486 Transcriptional regulatory protein, C terminal BF28_RS28095 PF00149 Calcineurin-like phosphoesterase BF28_RS28100 PF13416 Bacterial extracellular solute-binding protein BF28_RS28105 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS28110 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS28115 PF00005 ABC transporter BF28_RS28115 PF17912 MalK OB fold domain BF28_RS28120 PF04309 Glycerol-3-phosphate responsive antiterminator BF28_RS28140 PF03600 Citrate transporter BF28_RS28150 PF12431 Transcriptional regulator BF28_RS28150 PF00072 Response regulator receiver domain BF28_RS28155 PF00989 PAS fold BF28_RS28155 PF17203 Single cache domain 3 BF28_RS28155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS28155 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF28_RS28160 PF00672 HAMP domain BF28_RS28160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS28160 PF02743 Cache domain BF28_RS28165 PF15975 Flotillin BF28_RS28165 PF01145 SPFH domain / Band 7 family BF28_RS28175 PF18496 Collagenase G catalytic helper subdomain BF28_RS28175 PF08453 Peptidase family M9 N-terminal BF28_RS28175 PF01752 Collagenase BF28_RS28180 PF02028 BCCT, betaine/carnitine/choline family transporter BF28_RS28185 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS28190 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS28195 PF00005 ABC transporter BF28_RS28200 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF28_RS28215 PF04285 Protein of unknown function (DUF444) BF28_RS28225 PF08298 PrkA AAA domain BF28_RS28225 PF06798 PrkA serine protein kinase C-terminal domain BF28_RS28235 PF00563 EAL domain BF28_RS28235 PF00990 Diguanylate cyclase, GGDEF domain BF28_RS28235 PF03707 Bacterial signalling protein N terminal repeat BF28_RS28240 PF00588 SpoU rRNA Methylase family BF28_RS28245 PF12671 Putative amidase domain BF28_RS28250 PF08331 Domain of unknown function (DUF1730) BF28_RS28260 PF13462 Thioredoxin BF28_RS28265 PF00912 Transglycosylase BF28_RS28265 PF00905 Penicillin binding protein transpeptidase domain BF28_RS28270 PF00293 NUDIX domain BF28_RS28270 PF13344 Haloacid dehalogenase-like hydrolase BF28_RS28275 PF01709 Transcriptional regulator BF28_RS28375 PF11023 Zinc-ribbon containing domain BF28_RS28380 PF01475 Ferric uptake regulator family BF28_RS28385 PF00578 AhpC/TSA family BF28_RS28390 PF07885 Ion channel BF28_RS28405 PF00005 ABC transporter BF28_RS28410 PF00202 Aminotransferase class-III BF28_RS28415 PF01645 Conserved region in glutamate synthase BF28_RS28415 PF01493 GXGXG motif BF28_RS28415 PF04898 Glutamate synthase central domain BF28_RS28415 PF00310 Glutamine amidotransferases class-II BF28_RS28420 PF06081 Aromatic acid exporter family member 1 BF28_RS28425 PF00664 ABC transporter transmembrane region BF28_RS28425 PF00005 ABC transporter BF28_RS28430 PF04167 Protein of unknown function (DUF402) BF28_RS28435 PF14182 YgaB-like protein BF28_RS28440 PF04259 Small, acid-soluble spore protein, gamma-type BF28_RS28450 PF14815 NUDIX domain BF28_RS28450 PF00730 HhH-GPD superfamily base excision DNA repair protein BF28_RS28455 PF04307 LexA-binding, inner membrane-associated putative hydrolase BF28_RS28460 PF14043 WVELL protein BF28_RS28465 PF08176 Small acid-soluble spore protein K family BF28_RS28480 PF02631 RecX family BF28_RS28485 PF08338 Domain of unknown function (DUF1731) BF28_RS28485 PF01370 NAD dependent epimerase/dehydratase family BF28_RS28490 PF01979 Amidohydrolase family BF28_RS28505 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BF28_RS28505 PF04101 Glycosyltransferase family 28 C-terminal domain BF28_RS28510 PF04055 Radical SAM superfamily BF28_RS28515 PF02901 Pyruvate formate lyase-like BF28_RS28515 PF01228 Glycine radical BF28_RS28525 PF00535 Glycosyl transferase family 2 BF28_RS28530 PF01370 NAD dependent epimerase/dehydratase family BF28_RS28530 PF00551 Formyl transferase BF28_RS28530 PF02911 Formyl transferase, C-terminal domain BF28_RS28535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF28_RS28535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF28_RS28535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF28_RS28540 PF00535 Glycosyl transferase family 2 BF28_RS28560 PF00144 Beta-lactamase BF28_RS28565 PF02378 Phosphotransferase system, EIIC BF28_RS28565 PF00367 phosphotransferase system, EIIB BF28_RS28570 PF04960 Glutaminase BF28_RS28600 PF01546 Peptidase family M20/M25/M40 BF28_RS28600 PF07687 Peptidase dimerisation domain BF28_RS28605 PF00324 Amino acid permease BF28_RS28615 PF02954 Bacterial regulatory protein, Fis family BF28_RS28615 PF13426 PAS domain BF28_RS28615 PF00158 Sigma-54 interaction domain BF28_RS28625 PF01416 tRNA pseudouridine synthase BF28_RS28630 PF05958 tRNA (Uracil-5-)-methyltransferase BF28_RS28630 PF01938 TRAM domain BF28_RS28635 PF00730 HhH-GPD superfamily base excision DNA repair protein BF28_RS28640 PF01522 Polysaccharide deacetylase BF28_RS28645 PF05681 Fumarate hydratase (Fumerase) BF28_RS28645 PF05683 Fumarase C-terminus BF28_RS28655 PF08756 YfkB-like domain BF28_RS28655 PF04055 Radical SAM superfamily BF28_RS28660 PF14167 YfkD-like protein BF28_RS28665 PF01699 Sodium/calcium exchanger protein BF28_RS28670 PF16242 Pyridoxamine 5'-phosphate oxidase like BF28_RS28685 PF09335 SNARE associated Golgi protein BF28_RS28695 PF10502 Signal peptidase, peptidase S26 BF28_RS28705 PF00892 EamA-like transporter family BF28_RS28715 PF03631 Virulence factor BrkB BF28_RS28725 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF28_RS28730 PF06569 Protein of unknown function (DUF1128) BF28_RS28735 PF00690 Cation transporter/ATPase, N-terminus BF28_RS28735 PF00689 Cation transporting ATPase, C-terminus BF28_RS28740 PF05816 Toxic anion resistance protein (TelA) BF28_RS28745 PF14266 Putative component of 'biosynthetic module' BF28_RS28750 PF03741 Integral membrane protein TerC family BF28_RS28755 PF02342 TerD domain BF28_RS28760 PF02342 TerD domain BF28_RS28765 PF02342 TerD domain BF28_RS28770 PF00480 ROK family BF28_RS28780 PF09180 Prolyl-tRNA synthetase, C-terminal BF28_RS28780 PF03129 Anticodon binding domain BF28_RS28780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF28_RS28795 PF11700 Vacuole effluxer Atg22 like BF28_RS28815 PF08360 QacR-like protein, C-terminal region BF28_RS28815 PF00440 Bacterial regulatory proteins, tetR family BF28_RS28835 PF00041 Fibronectin type III domain BF28_RS28835 PF00704 Glycosyl hydrolases family 18 BF28_RS28840 PF12848 ABC transporter BF28_RS28840 PF00005 ABC transporter BF28_RS28850 PF00005 ABC transporter BF28_RS28860 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS28865 PF01910 Thiamine-binding protein BF28_RS28870 PF00672 HAMP domain BF28_RS28870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS28875 PF03605 Anaerobic c4-dicarboxylate membrane transporter BF28_RS28885 PF02581 Thiamine monophosphate synthase BF28_RS28890 PF02110 Hydroxyethylthiazole kinase family BF28_RS28895 PF01751 Toprim domain BF28_RS28895 PF01131 DNA topoisomerase BF28_RS28900 PF01061 ABC-2 type transporter BF28_RS28905 PF03372 Endonuclease/Exonuclease/phosphatase family BF28_RS28910 PF00367 phosphotransferase system, EIIB BF28_RS28910 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF28_RS28910 PF02378 Phosphotransferase system, EIIC BF28_RS28915 PF16657 Maltogenic Amylase, C-terminal domain BF28_RS28915 PF00128 Alpha amylase, catalytic domain BF28_RS28920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS28920 PF00672 HAMP domain BF28_RS28920 PF02743 Cache domain BF28_RS28925 PF00672 HAMP domain BF28_RS28925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_RS28925 PF12729 Four helix bundle sensory module for signal transduction BF28_RS28930 PF00005 ABC transporter BF28_RS28935 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF28_RS28940 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS28950 PF00355 Rieske [2Fe-2S] domain BF28_RS28950 PF01266 FAD dependent oxidoreductase BF28_RS28955 PF07690 Major Facilitator Superfamily BF28_RS29010 PF12728 Helix-turn-helix domain BF28_RS29025 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS29030 PF01497 Periplasmic binding protein BF28_RS29035 PF01032 FecCD transport family BF28_RS29040 PF01032 FecCD transport family BF28_RS29045 PF00596 Class II Aldolase and Adducin N-terminal domain BF28_RS29050 PF01008 Initiation factor 2 subunit family BF28_RS29055 PF01636 Phosphotransferase enzyme family BF28_RS29060 PF00578 AhpC/TSA family BF28_RS29065 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF28_RS29065 PF13192 Thioredoxin domain BF28_RS29075 PF01546 Peptidase family M20/M25/M40 BF28_RS29075 PF07687 Peptidase dimerisation domain BF28_RS29080 PF03553 Na+/H+ antiporter family BF28_RS29090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF28_RS29090 PF13378 Enolase C-terminal domain-like BF28_RS29105 PF07308 Protein of unknown function (DUF1456) BF28_RS29110 PF13188 PAS domain BF28_RS29110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS29110 PF00989 PAS fold BF28_RS29110 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS29110 PF13426 PAS domain BF28_RS29120 PF01207 Dihydrouridine synthase (Dus) BF28_RS29125 PF02475 Met-10+ like-protein BF28_RS29125 PF01938 TRAM domain BF28_RS29125 PF05958 tRNA (Uracil-5-)-methyltransferase BF28_RS29130 PF01773 Na+ dependent nucleoside transporter N-terminus BF28_RS29130 PF07670 Nucleoside recognition BF28_RS29130 PF07662 Na+ dependent nucleoside transporter C-terminus BF28_RS29145 PF02073 Thermophilic metalloprotease (M29) BF28_RS29150 PF00893 Small Multidrug Resistance protein BF28_RS29155 PF00171 Aldehyde dehydrogenase family BF28_RS29160 PF00158 Sigma-54 interaction domain BF28_RS29165 PF00202 Aminotransferase class-III BF28_RS29170 PF13419 Haloacid dehalogenase-like hydrolase BF28_RS29180 PF00781 Diacylglycerol kinase catalytic domain BF28_RS29185 PF02934 GatB/GatE catalytic domain BF28_RS29185 PF02637 GatB domain BF28_RS29190 PF01425 Amidase BF28_RS29195 PF02686 Glu-tRNAGln amidotransferase C subunit BF28_RS29200 PF05360 yiaA/B two helix domain BF28_RS29205 PF01047 MarR family BF28_RS29210 PF02374 Anion-transporting ATPase BF28_RS29210 PF17886 HSP20-like domain found in ArsA BF28_RS29225 PF03180 NLPA lipoprotein BF28_RS29230 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS29235 PF09383 NIL domain BF28_RS29235 PF00005 ABC transporter BF28_RS29240 PF00857 Isochorismatase family BF28_RS29250 PF00171 Aldehyde dehydrogenase family BF28_RS29255 PF01925 Sulfite exporter TauE/SafE BF28_RS29260 PF07537 CamS sex pheromone cAM373 precursor BF28_RS29265 PF01653 NAD-dependent DNA ligase adenylation domain BF28_RS29265 PF03120 NAD-dependent DNA ligase OB-fold domain BF28_RS29265 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BF28_RS29265 PF00533 BRCA1 C Terminus (BRCT) domain BF28_RS29265 PF12826 Helix-hairpin-helix motif BF28_RS29270 PF00580 UvrD/REP helicase N-terminal domain BF28_RS29270 PF13361 UvrD-like helicase C-terminal domain BF28_RS29275 PF01884 PcrB family BF28_RS29300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BF28_RS29300 PF02843 Phosphoribosylglycinamide synthetase, C domain BF28_RS29300 PF02844 Phosphoribosylglycinamide synthetase, N domain BF28_RS29305 PF02142 MGS-like domain BF28_RS29305 PF01808 AICARFT/IMPCHase bienzyme BF28_RS29310 PF00551 Formyl transferase BF28_RS29315 PF00586 AIR synthase related protein, N-terminal domain BF28_RS29315 PF02769 AIR synthase related protein, C-terminal domain BF28_RS29320 PF00156 Phosphoribosyl transferase domain BF28_RS29325 PF02769 AIR synthase related protein, C-terminal domain BF28_RS29325 PF00586 AIR synthase related protein, N-terminal domain BF28_RS29325 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BF28_RS29335 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BF28_RS29340 PF01259 SAICAR synthetase BF28_RS29345 PF00206 Lyase BF28_RS29345 PF10397 Adenylosuccinate lyase C-terminus BF28_RS29350 PF02222 ATP-grasp domain BF28_RS29350 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BF28_RS29380 PF00892 EamA-like transporter family BF28_RS29400 PF00486 Transcriptional regulatory protein, C terminal BF28_RS29400 PF00072 Response regulator receiver domain BF28_RS29405 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS29405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS29410 PF00005 ABC transporter BF28_RS29420 PF02673 Bacitracin resistance protein BacA BF28_RS29470 PF01323 DSBA-like thioredoxin domain BF28_RS29495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF28_RS29495 PF00512 His Kinase A (phospho-acceptor) domain BF28_RS29495 PF00989 PAS fold BF28_RS29495 PF16736 Single Cache-like BF28_RS29500 PF00072 Response regulator receiver domain BF28_RS29500 PF00486 Transcriptional regulatory protein, C terminal BF28_RS29505 PF00860 Permease family BF28_RS29510 PF02540 NAD synthase BF28_RS29510 PF00958 GMP synthase C terminal domain BF28_RS29510 PF00117 Glutamine amidotransferase class-I BF28_RS29520 PF14449 Pre-toxin TG BF28_RS29520 PF04740 LXG domain of WXG superfamily BF28_RS29525 PF00118 TCP-1/cpn60 chaperonin family BF28_RS29530 PF00166 Chaperonin 10 Kd subunit BF28_RS29535 PF02517 CPBP intramembrane metalloprotease BF28_RS29545 PF02629 CoA binding domain BF28_RS29545 PF06971 Putative DNA-binding protein N-terminus BF28_RS29550 PF16326 ABC transporter C-terminal domain BF28_RS29550 PF00005 ABC transporter BF28_RS29550 PF12848 ABC transporter BF28_RS29555 PF00814 Glycoprotease family BF28_RS29560 PF00583 Acetyltransferase (GNAT) family BF28_RS29565 PF00814 Glycoprotease family BF28_RS29570 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BF28_RS29655 PF17283 SprT-like zinc ribbon domain BF28_RS29655 PF10263 SprT-like family BF28_RS29665 PF17674 HHH domain BF28_RS29665 PF00575 S1 RNA binding domain BF28_RS29665 PF09371 Tex-like protein N-terminal domain BF28_RS29665 PF16921 Tex protein YqgF-like domain BF28_RS29670 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BF28_RS29675 PF01402 Ribbon-helix-helix protein, copG family BF28_RS29680 PF01168 Alanine racemase, N-terminal domain BF28_RS29680 PF00842 Alanine racemase, C-terminal domain BF28_RS29690 PF01648 4'-phosphopantetheinyl transferase superfamily BF28_RS29695 PF01694 Rhomboid family BF28_RS29700 PF03851 UV-endonuclease UvdE BF28_RS29705 PF00271 Helicase conserved C-terminal domain BF28_RS29705 PF00270 DEAD/DEAH box helicase BF28_RS29710 PF01225 Mur ligase family, catalytic domain BF28_RS29710 PF02875 Mur ligase family, glutamate ligase domain BF28_RS29710 PF08245 Mur ligase middle domain BF28_RS29715 PF01820 D-ala D-ala ligase N-terminus BF28_RS29715 PF07478 D-ala D-ala ligase C-terminus BF28_RS29730 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF28_RS29735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF28_RS29775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS29775 PF00005 ABC transporter BF28_RS29780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS29780 PF00005 ABC transporter BF28_RS29785 PF12911 N-terminal TM domain of oligopeptide transport permease C BF28_RS29785 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS29790 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS29795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS29810 PF16326 ABC transporter C-terminal domain BF28_RS29810 PF00005 ABC transporter BF28_RS29810 PF12848 ABC transporter BF28_RS29835 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BF28_RS29845 PF01026 TatD related DNase BF28_RS29860 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF28_RS29860 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF28_RS29870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF28_RS29870 PF00356 Bacterial regulatory proteins, lacI family BF28_RS29880 PF01553 Acyltransferase BF28_RS29885 PF14142 YrzO-like protein BF28_RS29890 PF00892 EamA-like transporter family BF28_RS29895 PF03466 LysR substrate binding domain BF28_RS29895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF28_RS29915 PF12728 Helix-turn-helix domain BF28_RS29915 PF12727 PBP superfamily domain BF28_RS29925 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS29930 PF06800 Sugar transport protein BF28_RS29935 PF04973 Nicotinamide mononucleotide transporter BF28_RS29945 PF03807 NADP oxidoreductase coenzyme F420-dependent BF28_RS29945 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF28_RS29950 PF00248 Aldo/keto reductase family BF28_RS29955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS29960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS29970 PF00440 Bacterial regulatory proteins, tetR family BF28_RS29980 PF12833 Helix-turn-helix domain BF28_RS29990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF28_RS29995 PF00005 ABC transporter BF28_RS29995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS30000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF28_RS30000 PF00005 ABC transporter BF28_RS30005 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS30005 PF12911 N-terminal TM domain of oligopeptide transport permease C BF28_RS30010 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS30025 PF07690 Major Facilitator Superfamily BF28_RS30035 PF07690 Major Facilitator Superfamily BF28_RS30040 PF01565 FAD binding domain BF28_RS30050 PF08240 Alcohol dehydrogenase GroES-like domain BF28_RS30050 PF00107 Zinc-binding dehydrogenase BF28_RS30055 PF03180 NLPA lipoprotein BF28_RS30060 PF00005 ABC transporter BF28_RS30060 PF09383 NIL domain BF28_RS30065 PF00528 Binding-protein-dependent transport system inner membrane component BF28_RS30100 PF07676 WD40-like Beta Propeller Repeat BF28_RS30100 PF00326 Prolyl oligopeptidase family BF28_RS30105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF28_RS30105 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF28_RS30110 PF02447 GntP family permease BF28_RS30115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF28_RS30115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF28_RS30120 PF07729 FCD domain BF28_RS30120 PF00392 Bacterial regulatory proteins, gntR family BF28_RS30125 PF00561 alpha/beta hydrolase fold BF28_RS30130 PF01380 SIS domain BF28_RS30140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF28_RS30140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF28_RS30140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF28_RS30140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF28_RS30200 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF28_RS30310 PF02040 Arsenical pump membrane protein BF28_RS30315 PF00132 Bacterial transferase hexapeptide (six repeats) BF28_RS30330 PF02652 L-lactate permease BF28_RS30335 PF14436 Bacterial EndoU nuclease BF28_RS30335 PF04740 LXG domain of WXG superfamily BF28_RS30415 PF01648 4'-phosphopantetheinyl transferase superfamily BF28_RS30420 PF02733 Dak1 domain