BA204_RS00005	SM00382	ATPases associated with a variety of cellular activities
BA204_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
BA204_RS00010	SM00480	DNA polymerase III beta subunit
BA204_RS00025	SM00387	Histidine kinase-like ATPases
BA204_RS00025	SM00433	TopoisomeraseII
BA204_RS00030	SM00434	DNA Topoisomerase IV
BA204_RS00065	SM00116	Domain in cystathionine beta-synthase and other proteins.
BA204_RS00065	SM01240	BA204_RS00065
BA204_RS00070	SM00936	Penicillin-binding protein 5, C-terminal domain 
BA204_RS00130	SM00382	ATPases associated with a variety of cellular activities
BA204_RS00140	SM00493	BA204_RS00140
BA204_RS00215	SM00465	GIY-YIG type nucleases (URI domain)
BA204_RS00225	SM00966	SpoVT / AbrB like domain 
BA204_RS00240	SM00493	BA204_RS00240
BA204_RS00245	SM00650	Ribosomal RNA adenine dimethylases
BA204_RS00290	SM01400	BA204_RS00290
BA204_RS00305	SM00487	DEAD-like helicases superfamily
BA204_RS00305	SM00490	helicase superfamily c-terminal domain
BA204_RS00305	SM00982	BA204_RS00305
BA204_RS00305	SM01058	CarD-like/TRCF domain
BA204_RS00310	SM00966	SpoVT / AbrB like domain 
BA204_RS00325	SM00363	S4 RNA-binding domain
BA204_RS00345	SM00316	Ribosomal protein S1-like RNA-binding domain
BA204_RS00360	SM00331	Sigma factor PP2C-like phosphatases
BA204_RS00360	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BA204_RS00365	SM00977	TilS substrate C-terminal domain
BA204_RS00375	SM00382	ATPases associated with a variety of cellular activities
BA204_RS00415	SM00905	Dihydroneopterin aldolase
BA204_RS00425	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS00530	SM00382	ATPases associated with a variety of cellular activities
BA204_RS00530	SM01086	C-terminal, D2-small domain, of ClpB protein
BA204_RS00535	SM00382	ATPases associated with a variety of cellular activities
BA204_RS00545	SM00670	Large family of predicted nucleotide-binding domains
BA204_RS00570	SM00840	BA204_RS00570
BA204_RS00575	SM00535	Ribonuclease III family
BA204_RS00580	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BA204_RS00590	SM00421	helix_turn_helix, Lux Regulon
BA204_RS00605	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BA204_RS00610	SM00649	Ribosomal protein L11/L12
BA204_RS00640	SM00663	RNA polymerase I subunit A N-terminus
BA204_RS00660	SM00838	Elongation factor G C-terminus
BA204_RS00660	SM00889	Elongation factor G, domain IV
BA204_RS00675	SM01403	BA204_RS00675
BA204_RS00695	SM01382	BA204_RS00695
BA204_RS00695	SM01383	BA204_RS00695
BA204_RS00710	SM00322	K homology RNA-binding domain
BA204_RS00730	SM01374	BA204_RS00730
BA204_RS00735	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BA204_RS00795	SM00316	Ribosomal protein S1-like RNA-binding domain
BA204_RS00815	SM00662	RNA polymerases D
BA204_RS00825	SM00382	ATPases associated with a variety of cellular activities
BA204_RS00830	SM00382	ATPases associated with a variety of cellular activities
BA204_RS00860	SM00646	BA204_RS00860
BA204_RS00875	SM01251	BA204_RS00875
BA204_RS01020	SM00382	ATPases associated with a variety of cellular activities
BA204_RS01020	SM00930	BA204_RS01020
BA204_RS01030	SM00829	Enoylreductase
BA204_RS01070	SM00342	helix_turn_helix, arabinose operon control protein
BA204_RS01160	SM00563	Phosphate acyltransferases
BA204_RS01175	SM00354	helix_turn _helix lactose operon repressor
BA204_RS01235	SM00382	ATPases associated with a variety of cellular activities
BA204_RS01265	SM00382	ATPases associated with a variety of cellular activities
BA204_RS01270	SM00382	ATPases associated with a variety of cellular activities
BA204_RS01345	SM00487	DEAD-like helicases superfamily
BA204_RS01345	SM00490	helicase superfamily c-terminal domain
BA204_RS01370	SM01005	Alanine racemase, C-terminal domain
BA204_RS01385	SM00316	Ribosomal protein S1-like RNA-binding domain
BA204_RS01385	SM00732	Likely ribonuclease with RNase H fold.
BA204_RS01395	SM00731	SprT homologues.
BA204_RS01505	SM00382	ATPases associated with a variety of cellular activities
BA204_RS01510	SM00881	CoA binding domain
BA204_RS01525	SM00883	Chaperonin 10 Kd subunit
BA204_RS01545	SM00448	cheY-homologous receiver domain
BA204_RS01545	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS01550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS01550	SM00387	Histidine kinase-like ATPases
BA204_RS01550	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS01600	SM01022	BA204_RS01600
BA204_RS01620	SM00382	ATPases associated with a variety of cellular activities
BA204_RS01625	SM00387	Histidine kinase-like ATPases
BA204_RS01625	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS01630	SM00448	cheY-homologous receiver domain
BA204_RS01630	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS01725	SM01001	AIR carboxylase
BA204_RS01735	SM00998	Adenylosuccinate lyase C-terminus
BA204_RS01750	SM01211	BA204_RS01750
BA204_RS01775	SM00798	AICARFT/IMPCHase bienzyme
BA204_RS01775	SM00851	MGS-like domain
BA204_RS01780	SM01209	BA204_RS01780
BA204_RS01780	SM01210	BA204_RS01780
BA204_RS01790	SM00244	prohibitin homologues
BA204_RS01815	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BA204_RS01815	SM00292	breast cancer carboxy-terminal domain
BA204_RS01815	SM00532	Ligase N family
BA204_RS01840	SM00382	ATPases associated with a variety of cellular activities
BA204_RS01840	SM00930	BA204_RS01840
BA204_RS01870	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS01890	SM00845	GatB domain
BA204_RS01895	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BA204_RS01915	SM00382	ATPases associated with a variety of cellular activities
BA204_RS01995	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BA204_RS02040	SM01007	Class II Aldolase and Adducin N-terminal domain
BA204_RS02110	SM00387	Histidine kinase-like ATPases
BA204_RS02110	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS02155	SM00062	Bacterial periplasmic substrate-binding proteins
BA204_RS02155	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BA204_RS02160	SM00382	ATPases associated with a variety of cellular activities
BA204_RS02165	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS02165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS02195	SM00100	Cyclic nucleotide-monophosphate binding domain
BA204_RS02195	SM00419	helix_turn_helix, cAMP Regulatory protein
BA204_RS02210	SM00642	Alpha-amylase domain
BA204_RS02230	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BA204_RS02230	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BA204_RS02230	SM00493	BA204_RS02230
BA204_RS02250	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS02250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS02275	SM00382	ATPases associated with a variety of cellular activities
BA204_RS02285	SM00060	Fibronectin type 3 domain
BA204_RS02285	SM00636	BA204_RS02285
BA204_RS02285	SM00637	BA204_RS02285
BA204_RS02320	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS02340	SM00946	Prolyl-tRNA synthetase, C-terminal
BA204_RS02385	SM00831	Cation transporter/ATPase, N-terminus
BA204_RS02395	SM00226	Low molecular weight phosphatase family
BA204_RS02490	SM00478	endonuclease III
BA204_RS02510	SM00382	ATPases associated with a variety of cellular activities
BA204_RS02530	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS02585	SM00984	UDP binding domain
BA204_RS02670	SM00478	endonuclease III
BA204_RS02670	SM00525	BA204_RS02670
BA204_RS02695	SM00382	ATPases associated with a variety of cellular activities
BA204_RS02715	SM00382	ATPases associated with a variety of cellular activities
BA204_RS02880	SM00567	E-Z type HEAT repeats
BA204_RS02895	SM00052	Putative diguanylate phosphodiesterase
BA204_RS02895	SM00091	PAS domain
BA204_RS02895	SM00267	diguanylate cyclase
BA204_RS02905	SM00763	PrkA AAA domain
BA204_RS02920	SM00365	Leucine-rich repeat, SDS22-like subfamily
BA204_RS02920	SM00725	NEAr Transporter domain
BA204_RS02935	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BA204_RS02945	SM00244	prohibitin homologues
BA204_RS02950	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS02950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS02955	SM00091	PAS domain
BA204_RS02955	SM00387	Histidine kinase-like ATPases
BA204_RS02980	SM00248	ankyrin repeats
BA204_RS02995	SM00382	ATPases associated with a variety of cellular activities
BA204_RS03020	SM00448	cheY-homologous receiver domain
BA204_RS03020	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS03025	SM00387	Histidine kinase-like ATPases
BA204_RS03025	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS03040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS03040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS03045	SM00387	Histidine kinase-like ATPases
BA204_RS03050	SM00448	cheY-homologous receiver domain
BA204_RS03060	SM00919	Malic enzyme, NAD binding domain
BA204_RS03060	SM01274	BA204_RS03060
BA204_RS03075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS03085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS03085	SM00387	Histidine kinase-like ATPases
BA204_RS03085	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS03090	SM00448	cheY-homologous receiver domain
BA204_RS03090	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS03110	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BA204_RS03110	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BA204_RS03125	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BA204_RS03125	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BA204_RS03135	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS03150	SM00028	Tetratricopeptide repeats
BA204_RS03150	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS03195	SM01091	Transporter associated domain
BA204_RS03210	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS03240	SM00382	ATPases associated with a variety of cellular activities
BA204_RS03265	SM00327	von Willebrand factor (vWF) type A domain
BA204_RS03270	SM00382	ATPases associated with a variety of cellular activities
BA204_RS03275	SM00155	Phospholipase D. Active site motifs.
BA204_RS03285	SM00052	Putative diguanylate phosphodiesterase
BA204_RS03285	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BA204_RS03285	SM00267	diguanylate cyclase
BA204_RS03295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS03295	SM00866	BA204_RS03295
BA204_RS03305	SM00642	Alpha-amylase domain
BA204_RS03340	SM00382	ATPases associated with a variety of cellular activities
BA204_RS03345	SM00062	Bacterial periplasmic substrate-binding proteins
BA204_RS03345	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BA204_RS03395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS03395	SM00387	Histidine kinase-like ATPases
BA204_RS03395	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS03400	SM00448	cheY-homologous receiver domain
BA204_RS03400	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS03430	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS03440	SM00354	helix_turn _helix lactose operon repressor
BA204_RS03455	SM00382	ATPases associated with a variety of cellular activities
BA204_RS03485	SM00829	Enoylreductase
BA204_RS03495	SM00770	Zinc dependent phospholipase C (alpha toxin)
BA204_RS03535	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS03545	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS03595	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS03695	SM00899	BA204_RS03695
BA204_RS03835	SM00116	Domain in cystathionine beta-synthase and other proteins.
BA204_RS03855	SM00287	Bacterial SH3 domain homologues
BA204_RS03865	SM00382	ATPases associated with a variety of cellular activities
BA204_RS03960	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS04005	SM00640	Glycosyl hydrolases family 32
BA204_RS04015	SM00354	helix_turn _helix lactose operon repressor
BA204_RS04090	SM00450	Rhodanese Homology Domain
BA204_RS04100	SM00450	Rhodanese Homology Domain
BA204_RS04105	SM00450	Rhodanese Homology Domain
BA204_RS04105	SM00849	Metallo-beta-lactamase superfamily
BA204_RS04115	SM00450	Rhodanese Homology Domain
BA204_RS04120	SM00450	Rhodanese Homology Domain
BA204_RS04145	SM00829	Enoylreductase
BA204_RS04205	SM00287	Bacterial SH3 domain homologues
BA204_RS04215	SM00382	ATPases associated with a variety of cellular activities
BA204_RS04270	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BA204_RS04370	SM00344	helix_turn_helix ASNC type
BA204_RS04385	SM00422	helix_turn_helix, mercury resistance
BA204_RS04420	SM00448	cheY-homologous receiver domain
BA204_RS04420	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS04425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS04425	SM00387	Histidine kinase-like ATPases
BA204_RS04425	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS04435	SM00382	ATPases associated with a variety of cellular activities
BA204_RS04445	SM00382	ATPases associated with a variety of cellular activities
BA204_RS04455	SM00849	Metallo-beta-lactamase superfamily
BA204_RS04500	SM01060	BA204_RS04500
BA204_RS04545	SM00382	ATPases associated with a variety of cellular activities
BA204_RS04550	SM00382	ATPases associated with a variety of cellular activities
BA204_RS04560	SM00062	Bacterial periplasmic substrate-binding proteins
BA204_RS04560	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BA204_RS04570	SM00382	ATPases associated with a variety of cellular activities
BA204_RS04640	SM00644	BA204_RS04640
BA204_RS04645	SM00729	Elongator protein 3, MiaB family, Radical SAM
BA204_RS04685	SM00047	Lysozyme subfamily 2
BA204_RS04720	SM00646	BA204_RS04720
BA204_RS04765	SM00382	ATPases associated with a variety of cellular activities
BA204_RS04770	SM00382	ATPases associated with a variety of cellular activities
BA204_RS04780	SM00849	Metallo-beta-lactamase superfamily
BA204_RS04940	SM00091	PAS domain
BA204_RS04940	SM00387	Histidine kinase-like ATPases
BA204_RS04945	SM00448	cheY-homologous receiver domain
BA204_RS04960	SM00487	DEAD-like helicases superfamily
BA204_RS04960	SM00490	helicase superfamily c-terminal domain
BA204_RS04990	SM00091	PAS domain
BA204_RS04990	SM00382	ATPases associated with a variety of cellular activities
BA204_RS05045	SM00894	Excalibur calcium-binding domain
BA204_RS05055	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS05180	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS05215	SM01120	BA204_RS05215
BA204_RS05220	SM00287	Bacterial SH3 domain homologues
BA204_RS05245	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS05260	SM00460	Transglutaminase/protease-like homologues
BA204_RS05345	SM00331	Sigma factor PP2C-like phosphatases
BA204_RS05345	SM00448	cheY-homologous receiver domain
BA204_RS05350	SM00138	Methyltransferase, chemotaxis proteins 
BA204_RS05355	SM00387	Histidine kinase-like ATPases
BA204_RS05355	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS05355	SM00448	cheY-homologous receiver domain
BA204_RS05395	SM00829	Enoylreductase
BA204_RS05430	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BA204_RS05465	SM00028	Tetratricopeptide repeats
BA204_RS05495	SM00835	Cupin
BA204_RS05595	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS05615	SM00382	ATPases associated with a variety of cellular activities
BA204_RS05785	SM00354	helix_turn _helix lactose operon repressor
BA204_RS05795	SM00849	Metallo-beta-lactamase superfamily
BA204_RS05840	SM00382	ATPases associated with a variety of cellular activities
BA204_RS05860	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BA204_RS05875	SM00342	helix_turn_helix, arabinose operon control protein
BA204_RS05875	SM00871	Bacterial transcription activator, effector binding domain
BA204_RS05885	SM00387	Histidine kinase-like ATPases
BA204_RS05885	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS05890	SM00448	cheY-homologous receiver domain
BA204_RS05890	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS05915	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS05915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS05950	SM00357	Cold shock protein domain
BA204_RS06065	SM01060	BA204_RS06065
BA204_RS06075	SM00642	Alpha-amylase domain
BA204_RS06085	SM00316	Ribosomal protein S1-like RNA-binding domain
BA204_RS06130	SM00382	ATPases associated with a variety of cellular activities
BA204_RS06130	SM01086	C-terminal, D2-small domain, of ClpB protein
BA204_RS06160	SM00825	Beta-ketoacyl synthase
BA204_RS06215	SM00382	ATPases associated with a variety of cellular activities
BA204_RS06220	SM00382	ATPases associated with a variety of cellular activities
BA204_RS06260	SM00155	Phospholipase D. Active site motifs.
BA204_RS06290	SM01118	BA204_RS06290
BA204_RS06300	SM00954	Region found in RelA / SpoT proteins
BA204_RS06455	SM00635	Bacterial Ig-like domain 2
BA204_RS06530	SM01324	BA204_RS06530
BA204_RS06575	SM00861	Transketolase, pyrimidine binding domain
BA204_RS06630	SM00857	Resolvase, N terminal domain
BA204_RS06705	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS06725	SM00382	ATPases associated with a variety of cellular activities
BA204_RS06745	SM00014	Acid phosphatase homologues
BA204_RS06795	SM00448	cheY-homologous receiver domain
BA204_RS06795	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS06800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS06800	SM00387	Histidine kinase-like ATPases
BA204_RS06800	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS06805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS06805	SM00895	BA204_RS06805
BA204_RS06875	SM00822	BA204_RS06875
BA204_RS06915	SM00382	ATPases associated with a variety of cellular activities
BA204_RS06940	SM00420	helix_turn_helix, Deoxyribose operon repressor
BA204_RS06940	SM01134	BA204_RS06940
BA204_RS06950	SM00365	Leucine-rich repeat, SDS22-like subfamily
BA204_RS06950	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BA204_RS06950	SM00725	NEAr Transporter domain
BA204_RS06955	SM01007	Class II Aldolase and Adducin N-terminal domain
BA204_RS06975	SM00387	Histidine kinase-like ATPases
BA204_RS06975	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS06980	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS07000	SM00387	Histidine kinase-like ATPases
BA204_RS07000	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS07085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS07090	SM00382	ATPases associated with a variety of cellular activities
BA204_RS07100	SM00382	ATPases associated with a variety of cellular activities
BA204_RS07120	SM00344	helix_turn_helix ASNC type
BA204_RS07240	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS07315	SM00917	LeuA allosteric (dimerisation) domain
BA204_RS07320	SM01329	BA204_RS07320
BA204_RS07505	SM00387	Histidine kinase-like ATPases
BA204_RS07510	SM00421	helix_turn_helix, Lux Regulon
BA204_RS07510	SM00448	cheY-homologous receiver domain
BA204_RS07605	SM00387	Histidine kinase-like ATPases
BA204_RS07605	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS07625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS07625	SM00387	Histidine kinase-like ATPases
BA204_RS07625	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS07675	SM00363	S4 RNA-binding domain
BA204_RS07695	SM00448	cheY-homologous receiver domain
BA204_RS07695	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS07700	SM00091	PAS domain
BA204_RS07700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS07700	SM00387	Histidine kinase-like ATPases
BA204_RS07700	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS07710	SM00257	Lysin motif
BA204_RS07735	SM00487	DEAD-like helicases superfamily
BA204_RS07735	SM00490	helicase superfamily c-terminal domain
BA204_RS07745	SM00257	Lysin motif
BA204_RS07755	SM00422	helix_turn_helix, mercury resistance
BA204_RS07765	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BA204_RS07780	SM00644	BA204_RS07780
BA204_RS07790	SM00870	BA204_RS07790
BA204_RS07805	SM00316	Ribosomal protein S1-like RNA-binding domain
BA204_RS07810	SM01240	BA204_RS07810
BA204_RS07870	SM00411	bacterial (prokaryotic) histone like domain
BA204_RS07895	SM00562	BA204_RS07895
BA204_RS07915	SM00028	Tetratricopeptide repeats
BA204_RS07920	SM00914	BA204_RS07920
BA204_RS07965	SM00986	Uracil DNA glycosylase superfamily
BA204_RS07965	SM00987	UreE urease accessory protein, C-terminal domain 
BA204_RS07990	SM00851	MGS-like domain
BA204_RS08040	SM00479	BA204_RS08040
BA204_RS08040	SM00487	DEAD-like helicases superfamily
BA204_RS08040	SM00491	BA204_RS08040
BA204_RS08065	SM00478	endonuclease III
BA204_RS08075	SM00060	Fibronectin type 3 domain
BA204_RS08135	SM00981	BA204_RS08135
BA204_RS08145	SM00491	BA204_RS08145
BA204_RS08205	SM00450	Rhodanese Homology Domain
BA204_RS08245	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BA204_RS08245	SM00475	5'-3' exonuclease
BA204_RS08355	SM00357	Cold shock protein domain
BA204_RS08405	SM00849	Metallo-beta-lactamase superfamily
BA204_RS08410	SM00422	helix_turn_helix, mercury resistance
BA204_RS08410	SM00871	Bacterial transcription activator, effector binding domain
BA204_RS08485	SM00448	cheY-homologous receiver domain
BA204_RS08490	SM00073	Histidine Phosphotransfer domain
BA204_RS08490	SM00260	Two component signalling adaptor domain
BA204_RS08490	SM00387	Histidine kinase-like ATPases
BA204_RS08490	SM01231	BA204_RS08490
BA204_RS08510	SM00138	Methyltransferase, chemotaxis proteins 
BA204_RS08585	SM00382	ATPases associated with a variety of cellular activities
BA204_RS08620	SM00260	Two component signalling adaptor domain
BA204_RS08620	SM00448	cheY-homologous receiver domain
BA204_RS08690	SM00382	ATPases associated with a variety of cellular activities
BA204_RS08690	SM00962	SRP54-type protein, GTPase domain
BA204_RS08700	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BA204_RS08745	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS08765	SM00382	ATPases associated with a variety of cellular activities
BA204_RS08780	SM00849	Metallo-beta-lactamase superfamily
BA204_RS08780	SM01027	Beta-Casp domain
BA204_RS08810	SM00855	Phosphoglycerate mutase family
BA204_RS08830	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS08870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS08870	SM00895	BA204_RS08870
BA204_RS08885	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BA204_RS08915	SM00422	helix_turn_helix, mercury resistance
BA204_RS08980	SM00028	Tetratricopeptide repeats
BA204_RS08990	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS09030	SM00421	helix_turn_helix, Lux Regulon
BA204_RS09030	SM00448	cheY-homologous receiver domain
BA204_RS09040	SM00382	ATPases associated with a variety of cellular activities
BA204_RS09060	SM00155	Phospholipase D. Active site motifs.
BA204_RS09080	SM00919	Malic enzyme, NAD binding domain
BA204_RS09080	SM01274	BA204_RS09080
BA204_RS09085	SM00387	Histidine kinase-like ATPases
BA204_RS09090	SM00448	cheY-homologous receiver domain
BA204_RS09305	SM00854	Bacterial capsule synthesis protein PGA_cap
BA204_RS09335	SM00850	LytTr DNA-binding domain
BA204_RS09370	SM00448	cheY-homologous receiver domain
BA204_RS09370	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS09375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS09375	SM00387	Histidine kinase-like ATPases
BA204_RS09375	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS09390	SM00450	Rhodanese Homology Domain
BA204_RS09460	SM01133	BA204_RS09460
BA204_RS09470	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BA204_RS09510	SM01011	Aminopeptidase P, N-terminal domain
BA204_RS09535	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BA204_RS09535	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BA204_RS09535	SM00493	BA204_RS09535
BA204_RS09635	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BA204_RS09645	SM00382	ATPases associated with a variety of cellular activities
BA204_RS09650	SM00382	ATPases associated with a variety of cellular activities
BA204_RS09685	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS09705	SM00382	ATPases associated with a variety of cellular activities
BA204_RS09710	SM00382	ATPases associated with a variety of cellular activities
BA204_RS09775	SM00287	Bacterial SH3 domain homologues
BA204_RS09785	SM00382	ATPases associated with a variety of cellular activities
BA204_RS09790	SM00448	cheY-homologous receiver domain
BA204_RS09790	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS09795	SM00387	Histidine kinase-like ATPases
BA204_RS09795	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS09865	SM00448	cheY-homologous receiver domain
BA204_RS09865	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS09870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS09870	SM00387	Histidine kinase-like ATPases
BA204_RS09870	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS09940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS09965	SM00460	Transglutaminase/protease-like homologues
BA204_RS09990	SM00966	SpoVT / AbrB like domain 
BA204_RS10030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS10030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS10095	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BA204_RS10150	SM00855	Phosphoglycerate mutase family
BA204_RS10205	SM00155	Phospholipase D. Active site motifs.
BA204_RS10230	SM01091	Transporter associated domain
BA204_RS10305	SM00244	prohibitin homologues
BA204_RS10315	SM00855	Phosphoglycerate mutase family
BA204_RS10335	SM01005	Alanine racemase, C-terminal domain
BA204_RS10365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS10535	SM00487	DEAD-like helicases superfamily
BA204_RS10535	SM00490	helicase superfamily c-terminal domain
BA204_RS10555	SM00829	Enoylreductase
BA204_RS10575	SM00849	Metallo-beta-lactamase superfamily
BA204_RS10590	SM00460	Transglutaminase/protease-like homologues
BA204_RS10605	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BA204_RS10625	SM00100	Cyclic nucleotide-monophosphate binding domain
BA204_RS10625	SM00419	helix_turn_helix, cAMP Regulatory protein
BA204_RS10630	SM00729	Elongator protein 3, MiaB family, Radical SAM
BA204_RS10640	SM00852	Probable molybdopterin binding domain
BA204_RS10710	SM00894	Excalibur calcium-binding domain
BA204_RS10760	SM00028	Tetratricopeptide repeats
BA204_RS10775	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BA204_RS10780	SM00382	ATPases associated with a variety of cellular activities
BA204_RS10805	SM00567	E-Z type HEAT repeats
BA204_RS10805	SM00932	Scaffold protein Nfu/NifU N terminal
BA204_RS10825	SM00836	DALR anticodon binding domain
BA204_RS10825	SM01016	Arginyl tRNA synthetase N terminal dom
BA204_RS10845	SM00028	Tetratricopeptide repeats
BA204_RS10930	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS10945	SM00382	ATPases associated with a variety of cellular activities
BA204_RS11000	SM00563	Phosphate acyltransferases
BA204_RS11060	SM00646	BA204_RS11060
BA204_RS11110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BA204_RS11115	SM00421	helix_turn_helix, Lux Regulon
BA204_RS11115	SM00448	cheY-homologous receiver domain
BA204_RS11130	SM00829	Enoylreductase
BA204_RS11155	SM01350	BA204_RS11155
BA204_RS11185	SM00382	ATPases associated with a variety of cellular activities
BA204_RS11225	SM01091	Transporter associated domain
BA204_RS11240	SM00387	Histidine kinase-like ATPases
BA204_RS11240	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS11260	SM00882	Coenzyme A transferase
BA204_RS11265	SM00882	Coenzyme A transferase
BA204_RS11280	SM00382	ATPases associated with a variety of cellular activities
BA204_RS11320	SM00219	Tyrosine kinase, catalytic domain
BA204_RS11330	SM00014	Acid phosphatase homologues
BA204_RS11515	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS11540	SM00822	BA204_RS11540
BA204_RS11560	SM00823	Phosphopantetheine attachment site
BA204_RS11560	SM00824	Thioesterase
BA204_RS11565	SM00923	MbtH-like protein
BA204_RS11585	SM00411	bacterial (prokaryotic) histone like domain
BA204_RS11635	SM00363	S4 RNA-binding domain
BA204_RS11640	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BA204_RS11645	SM00382	ATPases associated with a variety of cellular activities
BA204_RS11685	SM00849	Metallo-beta-lactamase superfamily
BA204_RS11690	SM00860	SMI1 / KNR4 family
BA204_RS11715	SM00100	Cyclic nucleotide-monophosphate binding domain
BA204_RS11730	SM00849	Metallo-beta-lactamase superfamily
BA204_RS11750	SM01059	Chloramphenicol acetyltransferase
BA204_RS11775	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS11810	SM00357	Cold shock protein domain
BA204_RS11835	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BA204_RS11870	SM00382	ATPases associated with a variety of cellular activities
BA204_RS11875	SM00382	ATPases associated with a variety of cellular activities
BA204_RS11920	SM00835	Cupin
BA204_RS11995	SM01207	BA204_RS11995
BA204_RS12010	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS12025	SM00849	Metallo-beta-lactamase superfamily
BA204_RS12030	SM00487	DEAD-like helicases superfamily
BA204_RS12030	SM00490	helicase superfamily c-terminal domain
BA204_RS12205	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS12210	SM00855	Phosphoglycerate mutase family
BA204_RS12255	SM00421	helix_turn_helix, Lux Regulon
BA204_RS12260	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS12265	SM00966	SpoVT / AbrB like domain 
BA204_RS12285	SM00936	Penicillin-binding protein 5, C-terminal domain 
BA204_RS12305	SM00823	Phosphopantetheine attachment site
BA204_RS12310	SM00823	Phosphopantetheine attachment site
BA204_RS12360	SM00047	Lysozyme subfamily 2
BA204_RS12455	SM00116	Domain in cystathionine beta-synthase and other proteins.
BA204_RS12455	SM00924	MgtE intracellular N domain
BA204_RS12505	SM00382	ATPases associated with a variety of cellular activities
BA204_RS12535	SM00878	Biotin carboxylase C-terminal domain
BA204_RS12605	SM00387	Histidine kinase-like ATPases
BA204_RS12605	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS12610	SM00448	cheY-homologous receiver domain
BA204_RS12610	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS12650	SM00342	helix_turn_helix, arabinose operon control protein
BA204_RS12680	SM00382	ATPases associated with a variety of cellular activities
BA204_RS12700	SM00422	helix_turn_helix, mercury resistance
BA204_RS12700	SM00871	Bacterial transcription activator, effector binding domain
BA204_RS12830	SM00448	cheY-homologous receiver domain
BA204_RS12830	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS12835	SM00387	Histidine kinase-like ATPases
BA204_RS12840	SM00382	ATPases associated with a variety of cellular activities
BA204_RS12850	SM00382	ATPases associated with a variety of cellular activities
BA204_RS12880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS12885	SM01209	BA204_RS12885
BA204_RS12960	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS12965	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS12985	SM00966	SpoVT / AbrB like domain 
BA204_RS13080	SM00507	HNH nucleases
BA204_RS13185	SM00644	BA204_RS13185
BA204_RS13290	SM00091	PAS domain
BA204_RS13290	SM00387	Histidine kinase-like ATPases
BA204_RS13290	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS13320	SM00382	ATPases associated with a variety of cellular activities
BA204_RS13335	SM00387	Histidine kinase-like ATPases
BA204_RS13335	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS13380	SM00448	cheY-homologous receiver domain
BA204_RS13380	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS13385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS13385	SM00387	Histidine kinase-like ATPases
BA204_RS13385	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS13390	SM00829	Enoylreductase
BA204_RS13395	SM00014	Acid phosphatase homologues
BA204_RS13400	SM00740	BA204_RS13400
BA204_RS13480	SM00287	Bacterial SH3 domain homologues
BA204_RS13495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS13560	SM00480	DNA polymerase III beta subunit
BA204_RS13660	SM00465	GIY-YIG type nucleases (URI domain)
BA204_RS13730	SM00448	cheY-homologous receiver domain
BA204_RS13730	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS13735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS13735	SM00387	Histidine kinase-like ATPases
BA204_RS13735	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS13750	SM00382	ATPases associated with a variety of cellular activities
BA204_RS13785	SM00642	Alpha-amylase domain
BA204_RS13805	SM00871	Bacterial transcription activator, effector binding domain
BA204_RS13820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS13945	SM00382	ATPases associated with a variety of cellular activities
BA204_RS13965	SM00420	helix_turn_helix, Deoxyribose operon repressor
BA204_RS13965	SM01134	BA204_RS13965
BA204_RS14005	SM00861	Transketolase, pyrimidine binding domain
BA204_RS14065	SM00116	Domain in cystathionine beta-synthase and other proteins.
BA204_RS14065	SM00382	ATPases associated with a variety of cellular activities
BA204_RS14100	SM00060	Fibronectin type 3 domain
BA204_RS14100	SM00495	Chitin-binding domain type 3
BA204_RS14195	SM00341	Helicase and RNase D C-terminal
BA204_RS14195	SM00487	DEAD-like helicases superfamily
BA204_RS14195	SM00490	helicase superfamily c-terminal domain
BA204_RS14195	SM00956	BA204_RS14195
BA204_RS14220	SM00646	BA204_RS14220
BA204_RS14235	SM01131	BA204_RS14235
BA204_RS14250	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BA204_RS14275	SM01130	BA204_RS14275
BA204_RS14295	SM00091	PAS domain
BA204_RS14295	SM00382	ATPases associated with a variety of cellular activities
BA204_RS14365	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BA204_RS14390	SM00248	ankyrin repeats
BA204_RS14415	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BA204_RS14425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS14425	SM00387	Histidine kinase-like ATPases
BA204_RS14425	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS14430	SM00448	cheY-homologous receiver domain
BA204_RS14430	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS14705	SM00062	Bacterial periplasmic substrate-binding proteins
BA204_RS14710	SM00382	ATPases associated with a variety of cellular activities
BA204_RS14725	SM00028	Tetratricopeptide repeats
BA204_RS14820	SM00382	ATPases associated with a variety of cellular activities
BA204_RS14870	SM00830	Chorismate mutase type II
BA204_RS14910	SM00860	SMI1 / KNR4 family
BA204_RS14915	SM00287	Bacterial SH3 domain homologues
BA204_RS14990	SM01133	BA204_RS14990
BA204_RS15005	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS15025	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BA204_RS15045	SM00346	helix_turn_helix isocitrate lyase regulation
BA204_RS15085	SM00098	Alkaline phosphatase homologues
BA204_RS15095	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS15210	SM01060	BA204_RS15210
BA204_RS15305	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS15315	SM00889	Elongation factor G, domain IV
BA204_RS15330	SM00773	Proposed nucleic acid binding domain
BA204_RS15335	SM00860	SMI1 / KNR4 family
BA204_RS15345	SM00382	ATPases associated with a variety of cellular activities
BA204_RS15370	SM00342	helix_turn_helix, arabinose operon control protein
BA204_RS15370	SM00871	Bacterial transcription activator, effector binding domain
BA204_RS15400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS15415	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS15420	SM00448	cheY-homologous receiver domain
BA204_RS15420	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS15555	SM00797	Allophanate hydrolase subunit 2
BA204_RS15560	SM00796	Allophanate hydrolase subunit 1
BA204_RS15565	SM00346	helix_turn_helix isocitrate lyase regulation
BA204_RS15580	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS15700	SM00344	helix_turn_helix ASNC type
BA204_RS15710	SM00849	Metallo-beta-lactamase superfamily
BA204_RS15745	SM00870	BA204_RS15745
BA204_RS15750	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS15785	SM00387	Histidine kinase-like ATPases
BA204_RS15785	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS15790	SM00448	cheY-homologous receiver domain
BA204_RS15790	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS15800	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BA204_RS15800	SM00091	PAS domain
BA204_RS15800	SM00387	Histidine kinase-like ATPases
BA204_RS15800	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS15825	SM00342	helix_turn_helix, arabinose operon control protein
BA204_RS15850	SM00465	GIY-YIG type nucleases (URI domain)
BA204_RS15890	SM00448	cheY-homologous receiver domain
BA204_RS15895	SM00387	Histidine kinase-like ATPases
BA204_RS15985	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BA204_RS16055	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS16065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS16065	SM00387	Histidine kinase-like ATPases
BA204_RS16065	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS16070	SM00448	cheY-homologous receiver domain
BA204_RS16070	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS16140	SM00646	BA204_RS16140
BA204_RS16145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS16145	SM00387	Histidine kinase-like ATPases
BA204_RS16145	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS16150	SM00448	cheY-homologous receiver domain
BA204_RS16150	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS16175	SM01058	CarD-like/TRCF domain
BA204_RS16200	SM00155	Phospholipase D. Active site motifs.
BA204_RS16225	SM00226	Low molecular weight phosphatase family
BA204_RS16240	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS16360	SM00421	helix_turn_helix, Lux Regulon
BA204_RS16360	SM00448	cheY-homologous receiver domain
BA204_RS16435	SM00382	ATPases associated with a variety of cellular activities
BA204_RS16445	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS16460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS16460	SM00387	Histidine kinase-like ATPases
BA204_RS16460	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS16465	SM00448	cheY-homologous receiver domain
BA204_RS16465	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS16540	SM00644	BA204_RS16540
BA204_RS16630	SM00857	Resolvase, N terminal domain
BA204_RS16700	SM00854	Bacterial capsule synthesis protein PGA_cap
BA204_RS16725	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS16780	SM00382	ATPases associated with a variety of cellular activities
BA204_RS16900	SM00382	ATPases associated with a variety of cellular activities
BA204_RS16915	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS17005	SM00028	Tetratricopeptide repeats
BA204_RS17030	SM01091	Transporter associated domain
BA204_RS17035	SM00422	helix_turn_helix, mercury resistance
BA204_RS17115	SM01350	BA204_RS17115
BA204_RS17120	SM00861	Transketolase, pyrimidine binding domain
BA204_RS17140	SM00829	Enoylreductase
BA204_RS17150	SM01276	BA204_RS17150
BA204_RS17155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS17155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS17220	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS17235	SM00914	BA204_RS17235
BA204_RS17260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS17260	SM00866	BA204_RS17260
BA204_RS17285	SM00849	Metallo-beta-lactamase superfamily
BA204_RS17335	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS17340	SM00636	BA204_RS17340
BA204_RS17385	SM00871	Bacterial transcription activator, effector binding domain
BA204_RS17390	SM00420	helix_turn_helix, Deoxyribose operon repressor
BA204_RS17400	SM00382	ATPases associated with a variety of cellular activities
BA204_RS17425	SM00849	Metallo-beta-lactamase superfamily
BA204_RS17430	SM00641	Glycosyl hydrolases family 25
BA204_RS17490	SM00849	Metallo-beta-lactamase superfamily
BA204_RS17610	SM00829	Enoylreductase
BA204_RS17625	SM00855	Phosphoglycerate mutase family
BA204_RS17635	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BA204_RS17635	SM00534	ATPase domain of DNA mismatch repair MUTS family
BA204_RS17645	SM00642	Alpha-amylase domain
BA204_RS17695	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS17700	SM00829	Enoylreductase
BA204_RS17710	SM00028	Tetratricopeptide repeats
BA204_RS17780	SM00450	Rhodanese Homology Domain
BA204_RS17780	SM00849	Metallo-beta-lactamase superfamily
BA204_RS17815	SM00028	Tetratricopeptide repeats
BA204_RS17825	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS17825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS17825	SM00319	Homologues of the ligand binding domain of Tar
BA204_RS17960	SM00257	Lysin motif
BA204_RS18070	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
BA204_RS18140	SM00387	Histidine kinase-like ATPases
BA204_RS18140	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS18145	SM00387	Histidine kinase-like ATPases
BA204_RS18145	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS18150	SM00448	cheY-homologous receiver domain
BA204_RS18150	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS18205	SM00287	Bacterial SH3 domain homologues
BA204_RS18205	SM00644	BA204_RS18205
BA204_RS18270	SM00052	Putative diguanylate phosphodiesterase
BA204_RS18270	SM00091	PAS domain
BA204_RS18270	SM00267	diguanylate cyclase
BA204_RS18275	SM00382	ATPases associated with a variety of cellular activities
BA204_RS18300	SM00387	Histidine kinase-like ATPases
BA204_RS18300	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS18305	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BA204_RS18350	SM00479	BA204_RS18350
BA204_RS18355	SM00357	Cold shock protein domain
BA204_RS18380	SM01022	BA204_RS18380
BA204_RS18490	SM00852	Probable molybdopterin binding domain
BA204_RS18510	SM00729	Elongator protein 3, MiaB family, Radical SAM
BA204_RS18530	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BA204_RS18530	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BA204_RS18630	SM00382	ATPases associated with a variety of cellular activities
BA204_RS18645	SM00434	DNA Topoisomerase IV
BA204_RS18650	SM00387	Histidine kinase-like ATPases
BA204_RS18650	SM00433	TopoisomeraseII
BA204_RS18660	SM00881	CoA binding domain
BA204_RS18665	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BA204_RS18670	SM00448	cheY-homologous receiver domain
BA204_RS18670	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS18685	SM01207	BA204_RS18685
BA204_RS18700	SM00257	Lysin motif
BA204_RS18700	SM00636	BA204_RS18700
BA204_RS18720	SM00479	BA204_RS18720
BA204_RS18740	SM00382	ATPases associated with a variety of cellular activities
BA204_RS18785	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BA204_RS18820	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS18855	SM00644	BA204_RS18855
BA204_RS18855	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
BA204_RS18860	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BA204_RS18880	SM00091	PAS domain
BA204_RS18880	SM00387	Histidine kinase-like ATPases
BA204_RS18880	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS18915	SM01058	CarD-like/TRCF domain
BA204_RS19005	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19065	SM00287	Bacterial SH3 domain homologues
BA204_RS19065	SM00641	Glycosyl hydrolases family 25
BA204_RS19070	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19075	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19090	SM00861	Transketolase, pyrimidine binding domain
BA204_RS19105	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19110	SM00062	Bacterial periplasmic substrate-binding proteins
BA204_RS19125	SM00857	Resolvase, N terminal domain
BA204_RS19150	SM01230	BA204_RS19150
BA204_RS19155	SM00422	helix_turn_helix, mercury resistance
BA204_RS19175	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19205	SM00287	Bacterial SH3 domain homologues
BA204_RS19225	SM00420	helix_turn_helix, Deoxyribose operon repressor
BA204_RS19225	SM01134	BA204_RS19225
BA204_RS19260	SM00636	BA204_RS19260
BA204_RS19275	SM00411	bacterial (prokaryotic) histone like domain
BA204_RS19315	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19340	SM00342	helix_turn_helix, arabinose operon control protein
BA204_RS19350	SM00478	endonuclease III
BA204_RS19380	SM00052	Putative diguanylate phosphodiesterase
BA204_RS19380	SM00091	PAS domain
BA204_RS19380	SM00267	diguanylate cyclase
BA204_RS19430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS19440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS19440	SM00866	BA204_RS19440
BA204_RS19450	SM00148	Phospholipase C, catalytic domain (part); domain X
BA204_RS19460	SM00257	Lysin motif
BA204_RS19490	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BA204_RS19490	SM00534	ATPase domain of DNA mismatch repair MUTS family
BA204_RS19505	SM00729	Elongator protein 3, MiaB family, Radical SAM
BA204_RS19535	SM00322	K homology RNA-binding domain
BA204_RS19535	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BA204_RS19545	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19550	SM00852	Probable molybdopterin binding domain
BA204_RS19600	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS19610	SM00866	BA204_RS19610
BA204_RS19620	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19620	SM00843	BA204_RS19620
BA204_RS19635	SM00849	Metallo-beta-lactamase superfamily
BA204_RS19640	SM01130	BA204_RS19640
BA204_RS19650	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BA204_RS19680	SM00316	Ribosomal protein S1-like RNA-binding domain
BA204_RS19680	SM00322	K homology RNA-binding domain
BA204_RS19685	SM01387	BA204_RS19685
BA204_RS19690	SM00904	Riboflavin kinase
BA204_RS19725	SM00316	Ribosomal protein S1-like RNA-binding domain
BA204_RS19725	SM00322	K homology RNA-binding domain
BA204_RS19735	SM00479	BA204_RS19735
BA204_RS19735	SM00481	DNA polymerase alpha chain like domain
BA204_RS19745	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BA204_RS19790	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19790	SM01086	C-terminal, D2-small domain, of ClpB protein
BA204_RS19810	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BA204_RS19810	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BA204_RS19810	SM00493	BA204_RS19810
BA204_RS19820	SM00881	CoA binding domain
BA204_RS19870	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19870	SM00962	SRP54-type protein, GTPase domain
BA204_RS19870	SM00963	SRP54-type protein, helical bundle domain
BA204_RS19880	SM00382	ATPases associated with a variety of cellular activities
BA204_RS19880	SM00962	SRP54-type protein, GTPase domain
BA204_RS19880	SM00963	SRP54-type protein, helical bundle domain
BA204_RS19885	SM00968	SMC proteins Flexible Hinge Domain
BA204_RS19890	SM00358	Double-stranded RNA binding motif
BA204_RS19890	SM00535	Ribonuclease III family
BA204_RS19900	SM00822	BA204_RS19900
BA204_RS19905	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BA204_RS19920	SM00487	DEAD-like helicases superfamily
BA204_RS19920	SM00490	helicase superfamily c-terminal domain
BA204_RS19925	SM01120	BA204_RS19925
BA204_RS19925	SM01121	BA204_RS19925
BA204_RS19945	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BA204_RS19960	SM00220	Serine/Threonine protein kinases, catalytic domain
BA204_RS19960	SM00740	BA204_RS19960
BA204_RS19965	SM00331	Sigma factor PP2C-like phosphatases
BA204_RS19965	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BA204_RS19990	SM00487	DEAD-like helicases superfamily
BA204_RS19990	SM00490	helicase superfamily c-terminal domain
BA204_RS20000	SM01409	BA204_RS20000
BA204_RS20005	SM00072	Guanylate kinase homologues.
BA204_RS20020	SM00831	Cation transporter/ATPase, N-terminus
BA204_RS20065	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BA204_RS20080	SM00851	MGS-like domain
BA204_RS20080	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BA204_RS20080	SM01209	BA204_RS20080
BA204_RS20085	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BA204_RS20110	SM00363	S4 RNA-binding domain
BA204_RS20135	SM00363	S4 RNA-binding domain
BA204_RS20180	SM00864	Tubulin/FtsZ family, GTPase domain
BA204_RS20180	SM00865	Tubulin/FtsZ family, C-terminal domain
BA204_RS20185	SM00842	Cell division protein FtsA
BA204_RS20225	SM00740	BA204_RS20225
BA204_RS20230	SM00740	BA204_RS20230
BA204_RS20260	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
BA204_RS20280	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BA204_RS20320	SM00855	Phosphoglycerate mutase family
BA204_RS20385	SM00878	Biotin carboxylase C-terminal domain
BA204_RS20410	SM00670	Large family of predicted nucleotide-binding domains
BA204_RS20435	SM00838	Elongation factor G C-terminus
BA204_RS20515	SM00861	Transketolase, pyrimidine binding domain
BA204_RS20550	SM00849	Metallo-beta-lactamase superfamily
BA204_RS20615	SM00052	Putative diguanylate phosphodiesterase
BA204_RS20705	SM00387	Histidine kinase-like ATPases
BA204_RS20705	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS20720	SM00354	helix_turn _helix lactose operon repressor
BA204_RS20740	SM00642	Alpha-amylase domain
BA204_RS20745	SM00642	Alpha-amylase domain
BA204_RS20750	SM00382	ATPases associated with a variety of cellular activities
BA204_RS20785	SM00382	ATPases associated with a variety of cellular activities
BA204_RS20870	SM01007	Class II Aldolase and Adducin N-terminal domain
BA204_RS20900	SM00267	diguanylate cyclase
BA204_RS20935	SM01061	CAT RNA binding domain
BA204_RS20945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS20945	SM00866	BA204_RS20945
BA204_RS20960	SM00849	Metallo-beta-lactamase superfamily
BA204_RS21060	SM00387	Histidine kinase-like ATPases
BA204_RS21070	SM00936	Penicillin-binding protein 5, C-terminal domain 
BA204_RS21080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS21085	SM00382	ATPases associated with a variety of cellular activities
BA204_RS21100	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS21120	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BA204_RS21215	SM00354	helix_turn _helix lactose operon repressor
BA204_RS21240	SM00704	CDGSH-type zinc finger. Function unknown.
BA204_RS21270	SM00729	Elongator protein 3, MiaB family, Radical SAM
BA204_RS21270	SM00876	Biotin and Thiamin Synthesis associated domain
BA204_RS21325	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS21360	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BA204_RS21375	SM00849	Metallo-beta-lactamase superfamily
BA204_RS21405	SM00849	Metallo-beta-lactamase superfamily
BA204_RS21420	SM00831	Cation transporter/ATPase, N-terminus
BA204_RS21465	SM00382	ATPases associated with a variety of cellular activities
BA204_RS21475	SM00062	Bacterial periplasmic substrate-binding proteins
BA204_RS21475	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BA204_RS21520	SM00861	Transketolase, pyrimidine binding domain
BA204_RS21540	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BA204_RS21555	SM00091	PAS domain
BA204_RS21555	SM00382	ATPases associated with a variety of cellular activities
BA204_RS21580	SM00448	cheY-homologous receiver domain
BA204_RS21590	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BA204_RS21605	SM00363	S4 RNA-binding domain
BA204_RS21610	SM00861	Transketolase, pyrimidine binding domain
BA204_RS21645	SM00878	Biotin carboxylase C-terminal domain
BA204_RS21695	SM00382	ATPases associated with a variety of cellular activities
BA204_RS21715	SM00841	Elongation factor P, C-terminal
BA204_RS21715	SM01185	BA204_RS21715
BA204_RS21750	SM00529	Helix-turn-helix diphteria tox regulatory element
BA204_RS21780	SM00450	Rhodanese Homology Domain
BA204_RS21790	SM00354	helix_turn _helix lactose operon repressor
BA204_RS21855	SM00487	DEAD-like helicases superfamily
BA204_RS21855	SM00490	helicase superfamily c-terminal domain
BA204_RS21895	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BA204_RS21930	SM00382	ATPases associated with a variety of cellular activities
BA204_RS21985	SM01018	B12 binding domain
BA204_RS22010	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS22020	SM00849	Metallo-beta-lactamase superfamily
BA204_RS22060	SM00382	ATPases associated with a variety of cellular activities
BA204_RS22125	SM00382	ATPases associated with a variety of cellular activities
BA204_RS22140	SM00518	AP endonuclease family 2
BA204_RS22145	SM00487	DEAD-like helicases superfamily
BA204_RS22145	SM00490	helicase superfamily c-terminal domain
BA204_RS22180	SM00400	zinc finger
BA204_RS22180	SM00493	BA204_RS22180
BA204_RS22180	SM00766	DNA primase DnaG DnaB-binding
BA204_RS22200	SM00116	Domain in cystathionine beta-synthase and other proteins.
BA204_RS22235	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BA204_RS22275	SM00729	Elongator protein 3, MiaB family, Radical SAM
BA204_RS22290	SM00271	DnaJ molecular chaperone homology domain
BA204_RS22310	SM00729	Elongator protein 3, MiaB family, Radical SAM
BA204_RS22320	SM00838	Elongation factor G C-terminus
BA204_RS22350	SM00849	Metallo-beta-lactamase superfamily
BA204_RS22360	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BA204_RS22380	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BA204_RS22390	SM01103	BA204_RS22390
BA204_RS22445	SM00954	Region found in RelA / SpoT proteins
BA204_RS22455	SM00098	Alkaline phosphatase homologues
BA204_RS22480	SM00855	Phosphoglycerate mutase family
BA204_RS22525	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS22550	SM00382	ATPases associated with a variety of cellular activities
BA204_RS22655	SM00732	Likely ribonuclease with RNase H fold.
BA204_RS22665	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BA204_RS22700	SM00028	Tetratricopeptide repeats
BA204_RS22720	SM00382	ATPases associated with a variety of cellular activities
BA204_RS22760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BA204_RS22760	SM00954	Region found in RelA / SpoT proteins
BA204_RS22805	SM01323	BA204_RS22805
BA204_RS22825	SM00382	ATPases associated with a variety of cellular activities
BA204_RS22830	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BA204_RS22855	SM00257	Lysin motif
BA204_RS22910	SM00382	ATPases associated with a variety of cellular activities
BA204_RS22915	SM00387	Histidine kinase-like ATPases
BA204_RS22920	SM00448	cheY-homologous receiver domain
BA204_RS22920	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS22930	SM01317	BA204_RS22930
BA204_RS23020	SM00257	Lysin motif
BA204_RS23030	SM01004	Delta-aminolevulinic acid dehydratase
BA204_RS23055	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS23070	SM00382	ATPases associated with a variety of cellular activities
BA204_RS23070	SM00464	Found in ATP-dependent protease La (LON)
BA204_RS23075	SM00382	ATPases associated with a variety of cellular activities
BA204_RS23080	SM00382	ATPases associated with a variety of cellular activities
BA204_RS23080	SM00994	ClpX C4-type zinc finger
BA204_RS23080	SM01086	C-terminal, D2-small domain, of ClpB protein
BA204_RS23140	SM00909	Sporulation and spore germination
BA204_RS23155	SM00421	helix_turn_helix, Lux Regulon
BA204_RS23175	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS23200	SM00382	ATPases associated with a variety of cellular activities
BA204_RS23255	SM00465	GIY-YIG type nucleases (URI domain)
BA204_RS23265	SM00893	Electron transfer flavoprotein domain
BA204_RS23270	SM00893	Electron transfer flavoprotein domain
BA204_RS23345	SM00382	ATPases associated with a variety of cellular activities
BA204_RS23350	SM00387	Histidine kinase-like ATPases
BA204_RS23350	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS23355	SM00448	cheY-homologous receiver domain
BA204_RS23355	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS23370	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BA204_RS23385	SM00382	ATPases associated with a variety of cellular activities
BA204_RS23400	SM00725	NEAr Transporter domain
BA204_RS23405	SM00725	NEAr Transporter domain
BA204_RS23410	SM00725	NEAr Transporter domain
BA204_RS23420	SM00363	S4 RNA-binding domain
BA204_RS23430	SM00463	Small MutS-related domain
BA204_RS23430	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BA204_RS23430	SM00534	ATPase domain of DNA mismatch repair MUTS family
BA204_RS23435	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BA204_RS23435	SM00481	DNA polymerase alpha chain like domain
BA204_RS23435	SM00483	DNA polymerase X family
BA204_RS23475	SM00873	B3/4 domain
BA204_RS23475	SM00874	tRNA synthetase B5 domain
BA204_RS23475	SM00896	Ferredoxin-fold anticodon binding domain
BA204_RS23485	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BA204_RS23555	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BA204_RS23570	SM00382	ATPases associated with a variety of cellular activities
BA204_RS23595	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BA204_RS23610	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BA204_RS23610	SM01232	BA204_RS23610
BA204_RS23615	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BA204_RS23615	SM00474	3'-5' exonuclease
BA204_RS23615	SM00475	5'-3' exonuclease
BA204_RS23615	SM00482	DNA polymerase A domain
BA204_RS23620	SM00091	PAS domain
BA204_RS23620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS23620	SM00387	Histidine kinase-like ATPases
BA204_RS23620	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS23625	SM00448	cheY-homologous receiver domain
BA204_RS23625	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS23645	SM01329	BA204_RS23645
BA204_RS23695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS23700	SM00919	Malic enzyme, NAD binding domain
BA204_RS23700	SM01274	BA204_RS23700
BA204_RS23705	SM00481	DNA polymerase alpha chain like domain
BA204_RS23735	SM00116	Domain in cystathionine beta-synthase and other proteins.
BA204_RS23745	SM00849	Metallo-beta-lactamase superfamily
BA204_RS23800	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BA204_RS23800	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BA204_RS23925	SM00981	BA204_RS23925
BA204_RS23970	SM00363	S4 RNA-binding domain
BA204_RS23970	SM01390	BA204_RS23970
BA204_RS24020	SM00363	S4 RNA-binding domain
BA204_RS24040	SM01266	BA204_RS24040
BA204_RS24055	SM00116	Domain in cystathionine beta-synthase and other proteins.
BA204_RS24075	SM00448	cheY-homologous receiver domain
BA204_RS24075	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS24080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS24080	SM00387	Histidine kinase-like ATPases
BA204_RS24080	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS24085	SM00248	ankyrin repeats
BA204_RS24110	SM00354	helix_turn _helix lactose operon repressor
BA204_RS24120	SM00830	Chorismate mutase type II
BA204_RS24170	SM00382	ATPases associated with a variety of cellular activities
BA204_RS24170	SM00843	BA204_RS24170
BA204_RS24175	SM00646	BA204_RS24175
BA204_RS24215	SM00849	Metallo-beta-lactamase superfamily
BA204_RS24235	SM00642	Alpha-amylase domain
BA204_RS24255	SM00420	helix_turn_helix, Deoxyribose operon repressor
BA204_RS24260	SM00363	S4 RNA-binding domain
BA204_RS24285	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS24315	SM01058	CarD-like/TRCF domain
BA204_RS24350	SM00852	Probable molybdopterin binding domain
BA204_RS24365	SM00729	Elongator protein 3, MiaB family, Radical SAM
BA204_RS24390	SM00450	Rhodanese Homology Domain
BA204_RS24475	SM00382	ATPases associated with a variety of cellular activities
BA204_RS24495	SM00729	Elongator protein 3, MiaB family, Radical SAM
BA204_RS24505	SM00382	ATPases associated with a variety of cellular activities
BA204_RS24570	SM00014	Acid phosphatase homologues
BA204_RS24585	SM00852	Probable molybdopterin binding domain
BA204_RS24645	SM00387	Histidine kinase-like ATPases
BA204_RS24650	SM00387	Histidine kinase-like ATPases
BA204_RS24650	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS24680	SM00382	ATPases associated with a variety of cellular activities
BA204_RS24745	SM01234	BA204_RS24745
BA204_RS24750	SM00947	Carbonic anhydrase
BA204_RS24815	SM00899	BA204_RS24815
BA204_RS24825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS24825	SM00387	Histidine kinase-like ATPases
BA204_RS24825	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS24830	SM00448	cheY-homologous receiver domain
BA204_RS24830	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS24860	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BA204_RS24920	SM00382	ATPases associated with a variety of cellular activities
BA204_RS24925	SM00342	helix_turn_helix, arabinose operon control protein
BA204_RS24925	SM00871	Bacterial transcription activator, effector binding domain
BA204_RS24935	SM00382	ATPases associated with a variety of cellular activities
BA204_RS24945	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS24950	SM00448	cheY-homologous receiver domain
BA204_RS24950	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS24955	SM00387	Histidine kinase-like ATPases
BA204_RS24970	SM00382	ATPases associated with a variety of cellular activities
BA204_RS24990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS24990	SM00866	BA204_RS24990
BA204_RS25020	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS25020	SM00387	Histidine kinase-like ATPases
BA204_RS25020	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS25025	SM00448	cheY-homologous receiver domain
BA204_RS25025	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS25030	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BA204_RS25070	SM00357	Cold shock protein domain
BA204_RS25115	SM00642	Alpha-amylase domain
BA204_RS25300	SM00316	Ribosomal protein S1-like RNA-binding domain
BA204_RS25310	SM00344	helix_turn_helix ASNC type
BA204_RS25345	SM01298	BA204_RS25345
BA204_RS25350	SM00479	BA204_RS25350
BA204_RS25470	SM00871	Bacterial transcription activator, effector binding domain
BA204_RS25525	SM00382	ATPases associated with a variety of cellular activities
BA204_RS25555	SM00860	SMI1 / KNR4 family
BA204_RS25685	SM00422	helix_turn_helix, mercury resistance
BA204_RS25700	SM00855	Phosphoglycerate mutase family
BA204_RS25710	SM00729	Elongator protein 3, MiaB family, Radical SAM
BA204_RS25760	SM00382	ATPases associated with a variety of cellular activities
BA204_RS25775	SM00382	ATPases associated with a variety of cellular activities
BA204_RS25775	SM00930	BA204_RS25775
BA204_RS25795	SM00493	BA204_RS25795
BA204_RS25860	SM00849	Metallo-beta-lactamase superfamily
BA204_RS25910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS25910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS25990	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS26010	SM00448	cheY-homologous receiver domain
BA204_RS26010	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS26015	SM00387	Histidine kinase-like ATPases
BA204_RS26015	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS26040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS26040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS26045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS26045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS26065	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS26160	SM01276	BA204_RS26160
BA204_RS26200	SM00363	S4 RNA-binding domain
BA204_RS26210	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
BA204_RS26215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS26250	SM00382	ATPases associated with a variety of cellular activities
BA204_RS26285	SM00382	ATPases associated with a variety of cellular activities
BA204_RS26305	SM00448	cheY-homologous receiver domain
BA204_RS26305	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS26330	SM00316	Ribosomal protein S1-like RNA-binding domain
BA204_RS26330	SM00357	Cold shock protein domain
BA204_RS26330	SM00955	BA204_RS26330
BA204_RS26360	SM01192	BA204_RS26360
BA204_RS26360	SM01193	BA204_RS26360
BA204_RS26380	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BA204_RS26485	SM00028	Tetratricopeptide repeats
BA204_RS26525	SM00487	DEAD-like helicases superfamily
BA204_RS26525	SM00490	helicase superfamily c-terminal domain
BA204_RS26540	SM00422	helix_turn_helix, mercury resistance
BA204_RS26550	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS26565	SM00422	helix_turn_helix, mercury resistance
BA204_RS26575	SM00382	ATPases associated with a variety of cellular activities
BA204_RS26585	SM00382	ATPases associated with a variety of cellular activities
BA204_RS26600	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BA204_RS26600	SM00245	tail specific protease
BA204_RS26610	SM00382	ATPases associated with a variety of cellular activities
BA204_RS26630	SM00937	BA204_RS26630
BA204_RS26640	SM00957	SecA DEAD-like domain
BA204_RS26640	SM00958	SecA preprotein cross-linking domain
BA204_RS26650	SM00382	ATPases associated with a variety of cellular activities
BA204_RS26685	SM00357	Cold shock protein domain
BA204_RS26695	SM00487	DEAD-like helicases superfamily
BA204_RS26695	SM00490	helicase superfamily c-terminal domain
BA204_RS26735	SM00984	UDP binding domain
BA204_RS26750	SM00382	ATPases associated with a variety of cellular activities
BA204_RS26755	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BA204_RS26905	SM00287	Bacterial SH3 domain homologues
BA204_RS26940	SM00287	Bacterial SH3 domain homologues
BA204_RS26970	SM00487	DEAD-like helicases superfamily
BA204_RS26970	SM00490	helicase superfamily c-terminal domain
BA204_RS27015	SM00382	ATPases associated with a variety of cellular activities
BA204_RS27040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS27040	SM00387	Histidine kinase-like ATPases
BA204_RS27040	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS27045	SM00448	cheY-homologous receiver domain
BA204_RS27045	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS27125	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BA204_RS27125	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BA204_RS27140	SM00984	UDP binding domain
BA204_RS27205	SM00382	ATPases associated with a variety of cellular activities
BA204_RS27210	SM00850	LytTr DNA-binding domain
BA204_RS27290	SM00052	Putative diguanylate phosphodiesterase
BA204_RS27290	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BA204_RS27290	SM00091	PAS domain
BA204_RS27290	SM00267	diguanylate cyclase
BA204_RS27310	SM00382	ATPases associated with a variety of cellular activities
BA204_RS27380	SM00226	Low molecular weight phosphatase family
BA204_RS27400	SM00903	Flavin reductase like domain
BA204_RS27435	SM00937	BA204_RS27435
BA204_RS27455	SM00357	Cold shock protein domain
BA204_RS27455	SM00382	ATPases associated with a variety of cellular activities
BA204_RS27455	SM00959	Rho termination factor, N-terminal domain
BA204_RS27485	SM00448	cheY-homologous receiver domain
BA204_RS27535	SM00155	Phospholipase D. Active site motifs.
BA204_RS27545	SM00052	Putative diguanylate phosphodiesterase
BA204_RS27545	SM00267	diguanylate cyclase
BA204_RS27555	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS27565	SM00421	helix_turn_helix, Lux Regulon
BA204_RS27565	SM00448	cheY-homologous receiver domain
BA204_RS27580	SM00382	ATPases associated with a variety of cellular activities
BA204_RS27625	SM00836	DALR anticodon binding domain
BA204_RS27625	SM01016	Arginyl tRNA synthetase N terminal dom
BA204_RS27675	SM00422	helix_turn_helix, mercury resistance
BA204_RS27705	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BA204_RS27715	SM00382	ATPases associated with a variety of cellular activities
BA204_RS27755	SM00936	Penicillin-binding protein 5, C-terminal domain 
BA204_RS27800	SM00986	Uracil DNA glycosylase superfamily
BA204_RS27800	SM00987	UreE urease accessory protein, C-terminal domain 
BA204_RS27810	SM00382	ATPases associated with a variety of cellular activities
BA204_RS27820	SM00354	helix_turn _helix lactose operon repressor
BA204_RS27855	SM00100	Cyclic nucleotide-monophosphate binding domain
BA204_RS27865	SM00421	helix_turn_helix, Lux Regulon
BA204_RS27865	SM00448	cheY-homologous receiver domain
BA204_RS27870	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BA204_RS27880	SM00267	diguanylate cyclase
BA204_RS27895	SM00448	cheY-homologous receiver domain
BA204_RS27895	SM00850	LytTr DNA-binding domain
BA204_RS27930	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BA204_RS27970	SM00382	ATPases associated with a variety of cellular activities
BA204_RS28005	SM00448	cheY-homologous receiver domain
BA204_RS28005	SM00850	LytTr DNA-binding domain
BA204_RS28010	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BA204_RS28010	SM00387	Histidine kinase-like ATPases
BA204_RS28070	SM00487	DEAD-like helicases superfamily
BA204_RS28070	SM00490	helicase superfamily c-terminal domain
BA204_RS28075	SM01240	BA204_RS28075
BA204_RS28090	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BA204_RS28090	SM00387	Histidine kinase-like ATPases
BA204_RS28090	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS28105	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BA204_RS28110	SM00849	Metallo-beta-lactamase superfamily
BA204_RS28125	SM00091	PAS domain
BA204_RS28125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BA204_RS28125	SM00387	Histidine kinase-like ATPases
BA204_RS28125	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS28130	SM00448	cheY-homologous receiver domain
BA204_RS28130	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS28155	SM00788	Adenylosuccinate synthetase
BA204_RS28170	SM00267	diguanylate cyclase
BA204_RS28215	SM00470	ParB-like nuclease domain
BA204_RS28225	SM00470	ParB-like nuclease domain
BA204_RS28235	SM01228	BA204_RS28235
BA204_RS28245	SM00393	Putative single-stranded nucleic acids-binding domain
BA204_RS28245	SM01245	BA204_RS28245
BA204_RS28265	SM00382	ATPases associated with a variety of cellular activities
BA204_RS28285	SM00448	cheY-homologous receiver domain
BA204_RS28285	SM00862	Transcriptional regulatory protein, C terminal
BA204_RS28290	SM00387	Histidine kinase-like ATPases
BA204_RS28290	SM00388	His Kinase A (phosphoacceptor) domain
BA204_RS28295	SM00382	ATPases associated with a variety of cellular activities
BA204_RS28345	SM01260	BA204_RS28345
BA204_RS28365	SM01260	BA204_RS28365
BA204_RS28370	SM00382	ATPases associated with a variety of cellular activities
BA204_RS28425	SM00382	ATPases associated with a variety of cellular activities
BA204_RS28440	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BA204_RS28475	SM00825	Beta-ketoacyl synthase
BA204_RS28505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS28525	SM00470	ParB-like nuclease domain
BA204_RS28570	SM00382	ATPases associated with a variety of cellular activities
BA204_RS28580	SM00822	BA204_RS28580
BA204_RS28580	SM00823	Phosphopantetheine attachment site
BA204_RS28580	SM00825	Beta-ketoacyl synthase
BA204_RS28580	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BA204_RS28605	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BA204_RS28635	SM00822	BA204_RS28635
BA204_RS28635	SM00823	Phosphopantetheine attachment site
BA204_RS28635	SM00825	Beta-ketoacyl synthase
BA204_RS28635	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BA204_RS28655	SM00823	Phosphopantetheine attachment site
BA204_RS28655	SM01294	BA204_RS28655
BA204_RS28695	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS28700	SM00047	Lysozyme subfamily 2
BA204_RS28715	SM00060	Fibronectin type 3 domain
BA204_RS28715	SM00495	Chitin-binding domain type 3
BA204_RS28835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS28860	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS28890	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BA204_RS28890	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BA204_RS28925	SM00060	Fibronectin type 3 domain
BA204_RS28945	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS28970	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS29040	SM00966	SpoVT / AbrB like domain 
BA204_RS29060	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BA204_RS29060	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BA204_RS29060	SM00493	BA204_RS29060
BA204_RS29200	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS29205	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS29270	SM01321	BA204_RS29270
BA204_RS29285	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BA204_RS29285	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BA204_RS29300	SM00060	Fibronectin type 3 domain
BA204_RS29300	SM00495	Chitin-binding domain type 3
BA204_RS29300	SM01276	BA204_RS29300
BA204_RS29350	SM00382	ATPases associated with a variety of cellular activities
BA204_RS29355	SM00411	bacterial (prokaryotic) histone like domain
BA204_RS29365	SM00148	Phospholipase C, catalytic domain (part); domain X
BA204_RS29380	SM00382	ATPases associated with a variety of cellular activities
BA204_RS29385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BA204_RS29395	SM00060	Fibronectin type 3 domain
BA204_RS29395	SM00495	Chitin-binding domain type 3
BA204_RS29415	SM01120	BA204_RS29415
BA204_RS29450	SM00287	Bacterial SH3 domain homologues
BA204_RS29450	SM00644	BA204_RS29450
BA204_RS29455	SM00347	helix_turn_helix multiple antibiotic resistance protein
BA204_RS29505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BA204_RS29560	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS29575	SM00422	helix_turn_helix, mercury resistance
BA204_RS29630	SM00287	Bacterial SH3 domain homologues
BA204_RS29630	SM00644	BA204_RS29630
BA204_RS29740	SM00857	Resolvase, N terminal domain
BA204_RS29795	SM00382	ATPases associated with a variety of cellular activities
BA204_RS29820	SM00507	HNH nucleases
BA204_RS29825	SM00530	Helix-turn-helix XRE-family like proteins 
BA204_RS29830	SM00530	Helix-turn-helix XRE-family like proteins 
