locus-tag	class	description
CYJ15_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CYJ15_RS00010	COG0592	DNA-directed DNA polymerase activity
CYJ15_RS00015	COG2501	S4 domain
CYJ15_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CYJ15_RS00030	COG0187	DNA topoisomerase II activity
CYJ15_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CYJ15_RS00040	COG3437	response regulator, receiver
CYJ15_RS00075	COG1982	Orn Lys Arg decarboxylase major
CYJ15_RS00085	COG3870	Protein conserved in bacteria
CYJ15_RS00090	COG1728	Protein conserved in bacteria
CYJ15_RS00095	COG0470	DNA polymerase III
CYJ15_RS00100	COG1774	PSP1 C-terminal conserved region
CYJ15_RS00105	COG4467	Involved in initiation control of chromosome replication
CYJ15_RS00110	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CYJ15_RS00115	COG2827	Endonuclease containing a URI domain
CYJ15_RS00120	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CYJ15_RS00125	COG2002	toxin-antitoxin pair type II binding
CYJ15_RS00135	COG0084	hydrolase, TatD family'
CYJ15_RS00145	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CYJ15_RS00160	COG4466	Protein conserved in bacteria
CYJ15_RS00170	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CYJ15_RS00175	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CYJ15_RS00180	COG0251	oxidation-reduction process
CYJ15_RS00210	COG1136	(ABC) transporter
CYJ15_RS00220	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CYJ15_RS00225	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CYJ15_RS00230	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CYJ15_RS00245	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CYJ15_RS00250	COG2002	toxin-antitoxin pair type II binding
CYJ15_RS00255	COG2244	polysaccharide biosynthetic process
CYJ15_RS00260	COG3956	TIGRFAM MazG family protein
CYJ15_RS00265	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CYJ15_RS00285	COG1098	S1 RNA binding domain
CYJ15_RS00295	COG2208	phosphoserine phosphatase activity
CYJ15_RS00300	COG2304	oxidoreductase activity
CYJ15_RS00305	COG0515	serine threonine protein kinase
CYJ15_RS00310	COG0037	tRNA processing
CYJ15_RS00315	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CYJ15_RS00320	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CYJ15_RS00325	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CYJ15_RS00330	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CYJ15_RS00335	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CYJ15_RS00340	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CYJ15_RS00345	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CYJ15_RS00350	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CYJ15_RS00380	COG0516	GMP reductase activity
CYJ15_RS00380	COG0517	IMP dehydrogenase activity
CYJ15_RS00395	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CYJ15_RS00405	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CYJ15_RS00415	COG1428	Deoxynucleoside kinase
CYJ15_RS00420	COG1428	Deoxynucleoside kinase
CYJ15_RS00425	COG1388	LysM domain
CYJ15_RS00425	COG3858	chitin binding
CYJ15_RS00435	COG0590	tRNA wobble adenosine to inosine editing
CYJ15_RS00445	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CYJ15_RS00450	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CYJ15_RS00455	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CYJ15_RS00545	COG3880	PFAM UvrB UvrC protein
CYJ15_RS00550	COG3869	Catalyzes the specific phosphorylation of arginine residues in
CYJ15_RS00555	COG0542	response to heat
CYJ15_RS00560	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CYJ15_RS00565	COG4956	integral membrane protein (PIN domain superfamily)
CYJ15_RS00575	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CYJ15_RS00580	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CYJ15_RS00585	COG1045	serine acetyltransferase
CYJ15_RS00590	COG0215	cysteine-tRNA ligase activity
CYJ15_RS00600	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CYJ15_RS00605	COG3688	RNA-binding protein containing a PIN domain
CYJ15_RS00615	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CYJ15_RS00620	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CYJ15_RS00625	COG0250	Participates in transcription elongation, termination and antitermination
CYJ15_RS00630	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CYJ15_RS00635	COG0081	regulation of translation
CYJ15_RS00640	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CYJ15_RS00645	COG0222	ribosome binding
CYJ15_RS00650	COG2813	Specifically methylates the guanine in position
CYJ15_RS00665	COG1358	cellular component organization or biogenesis
CYJ15_RS00670	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CYJ15_RS00675	COG0049	tRNA binding
CYJ15_RS00680	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CYJ15_RS00685	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CYJ15_RS00690	COG0051	transcription antitermination factor activity, RNA binding
CYJ15_RS00700	COG0088	Forms part of the polypeptide exit tunnel
CYJ15_RS00705	COG0089	rRNA binding
CYJ15_RS00710	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CYJ15_RS00715	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CYJ15_RS00725	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CYJ15_RS00730	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CYJ15_RS00735	COG0255	Belongs to the universal ribosomal protein uL29 family
CYJ15_RS00740	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CYJ15_RS00745	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CYJ15_RS00750	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CYJ15_RS00760	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CYJ15_RS00765	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CYJ15_RS00770	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CYJ15_RS00775	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CYJ15_RS00780	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CYJ15_RS00790	COG0200	Binds to the 23S rRNA
CYJ15_RS00795	COG0201	protein transport
CYJ15_RS00800	COG0563	adenylate kinase activity
CYJ15_RS00805	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CYJ15_RS00810	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CYJ15_RS00815	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CYJ15_RS00820	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CYJ15_RS00825	COG0202	RNA polymerase activity
CYJ15_RS00830	COG0203	ribosomal protein L17
CYJ15_RS00835	COG1122	ATPase activity
CYJ15_RS00840	COG1122	ATPase activity
CYJ15_RS00845	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CYJ15_RS00855	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CYJ15_RS00860	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CYJ15_RS00865	COG0753	catalase activity
CYJ15_RS00875	COG2046	Belongs to the sulfate adenylyltransferase family
CYJ15_RS00880	COG0529	Catalyzes the synthesis of activated sulfate
CYJ15_RS00885	COG0833	amino acid
CYJ15_RS00895	COG0860	N-Acetylmuramoyl-L-alanine amidase
CYJ15_RS00900	COG0489	protein tyrosine kinase activity
CYJ15_RS00910	COG2194	sulfuric ester hydrolase activity
CYJ15_RS00925	COG0726	polysaccharide deacetylase
CYJ15_RS00935	COG1271	oxidase subunit
CYJ15_RS00940	COG1294	oxidase, subunit
CYJ15_RS00950	COG4988	ABC transporter
CYJ15_RS00955	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CYJ15_RS00960	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS01035	COG1595	DNA-templated transcription, initiation
CYJ15_RS01040	COG5662	AntiSigma factor
CYJ15_RS01045	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CYJ15_RS01050	COG4856	YbbR-like protein
CYJ15_RS01055	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CYJ15_RS01060	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CYJ15_RS01105	COG2814	Major facilitator Superfamily
CYJ15_RS01110	COG0583	DNA-binding transcription factor activity
CYJ15_RS01125	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CYJ15_RS01135	COG0840	transmembrane signaling receptor activity
CYJ15_RS01150	COG1695	Transcriptional regulator
CYJ15_RS01160	COG0840	transmembrane signaling receptor activity
CYJ15_RS01165	COG0477	Major facilitator Superfamily
CYJ15_RS01220	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CYJ15_RS01225	COG2814	Major facilitator Superfamily
CYJ15_RS01240	COG0519	Catalyzes the synthesis of GMP from XMP
CYJ15_RS01270	COG2814	Major facilitator Superfamily
CYJ15_RS01270	COG0477	Major facilitator Superfamily
CYJ15_RS01335	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CYJ15_RS01340	COG0210	DNA helicase
CYJ15_RS01360	COG0488	(ABC) transporter
CYJ15_RS01370	COG0069	glutamate synthase activity
CYJ15_RS01375	COG0789	Transcriptional regulator
CYJ15_RS01380	COG0789	Transcriptional regulator
CYJ15_RS01385	COG2814	Major facilitator Superfamily
CYJ15_RS01405	COG3708	Transcriptional regulator
CYJ15_RS01405	COG2207	Transcriptional regulator
CYJ15_RS01415	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CYJ15_RS01460	COG0681	Belongs to the peptidase S26 family
CYJ15_RS01470	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CYJ15_RS01495	COG3425	synthase
CYJ15_RS01510	COG0183	Belongs to the thiolase family
CYJ15_RS01535	COG0517	IMP dehydrogenase activity
CYJ15_RS01535	COG1125	glycine betaine transport
CYJ15_RS01540	COG1174	glycine betaine transport
CYJ15_RS01545	COG2190	(PTS) system
CYJ15_RS01550	COG1263	PTS System
CYJ15_RS01550	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CYJ15_RS01555	COG0366	Alpha amylase catalytic
CYJ15_RS01560	COG2188	Transcriptional regulator
CYJ15_RS01570	COG1070	Carbohydrate kinase
CYJ15_RS01580	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CYJ15_RS01590	COG0716	FMN binding
CYJ15_RS01605	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CYJ15_RS01615	COG2608	mercury ion transmembrane transporter activity
CYJ15_RS01620	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CYJ15_RS01630	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CYJ15_RS01635	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CYJ15_RS01640	COG0463	Glycosyl transferase, family 2
CYJ15_RS01680	COG2076	Multidrug Resistance protein
CYJ15_RS01685	COG2076	Multidrug Resistance protein
CYJ15_RS01695	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CYJ15_RS01700	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CYJ15_RS01705	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CYJ15_RS01715	COG1120	ATPase activity
CYJ15_RS01745	COG0217	transcriptional regulatory protein
CYJ15_RS01750	COG1366	Belongs to the anti-sigma-factor antagonist family
CYJ15_RS01760	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS01770	COG1309	transcriptional regulator
CYJ15_RS01790	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS01805	COG5434	Belongs to the glycosyl hydrolase 28 family
CYJ15_RS01815	COG0175	sulfate reduction
CYJ15_RS01840	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CYJ15_RS01845	COG0371	Dehydrogenase
CYJ15_RS01850	COG0318	PFAM AMP-dependent synthetase and ligase
CYJ15_RS01865	COG0697	spore germination
CYJ15_RS01885	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CYJ15_RS01895	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CYJ15_RS01920	COG0702	epimerase
CYJ15_RS01940	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CYJ15_RS01960	COG2848	UPF0210 protein
CYJ15_RS01965	COG1609	Transcriptional regulator
CYJ15_RS01980	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CYJ15_RS01995	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CYJ15_RS02000	COG5577	PFAM Coat F domain
CYJ15_RS02005	COG0667	Aldo Keto reductase
CYJ15_RS02015	COG1113	amino acid transport
CYJ15_RS02025	COG3104	oligopeptide transport
CYJ15_RS02030	COG0833	amino acid
CYJ15_RS02050	COG3842	ATPase activity
CYJ15_RS02055	COG1176	ABC-type spermidine putrescine transport system, permease component I
CYJ15_RS02115	COG0531	amino acid
CYJ15_RS02120	COG1556	Lactate utilization protein
CYJ15_RS02125	COG1139	Iron-sulfur cluster binding protein
CYJ15_RS02130	COG0247	lactate metabolic process
CYJ15_RS02140	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CYJ15_RS02145	COG1454	alcohol dehydrogenase
CYJ15_RS02155	COG1953	Uracil, thiamine, allantoin
CYJ15_RS02180	COG0531	amino acid
CYJ15_RS02185	COG1979	alcohol dehydrogenase
CYJ15_RS02190	COG0004	ammonium transporteR
CYJ15_RS02195	COG3290	protein histidine kinase activity
CYJ15_RS02200	COG4565	transcriptional regulatory protein
CYJ15_RS02205	COG2851	Citrate transporter
CYJ15_RS02210	COG0463	Glycosyl transferase, family 2
CYJ15_RS02215	COG3973	AAA domain
CYJ15_RS02255	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CYJ15_RS02265	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CYJ15_RS02270	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CYJ15_RS02275	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CYJ15_RS02280	COG1301	dicarboxylic acid transport
CYJ15_RS02285	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CYJ15_RS02315	COG1902	pentaerythritol trinitrate reductase activity
CYJ15_RS02335	COG0423	glycine-tRNA ligase activity
CYJ15_RS02345	COG0531	amino acid
CYJ15_RS02355	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CYJ15_RS02375	COG0628	permease
CYJ15_RS02385	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CYJ15_RS02390	COG0765	amino acid transport
CYJ15_RS02395	COG0765	amino acid transport
CYJ15_RS02410	COG1733	regulation of RNA biosynthetic process
CYJ15_RS02425	COG0586	Pfam SNARE associated Golgi protein
CYJ15_RS02430	COG0586	Pfam SNARE associated Golgi protein
CYJ15_RS02445	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CYJ15_RS02445	COG0646	methionine synthase
CYJ15_RS02450	COG1410	methionine synthase
CYJ15_RS02450	COG0646	methionine synthase
CYJ15_RS02485	COG3944	biosynthesis protein
CYJ15_RS02490	COG0489	protein tyrosine kinase activity
CYJ15_RS02495	COG4464	protein tyrosine phosphatase activity
CYJ15_RS02500	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CYJ15_RS02510	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CYJ15_RS02525	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CYJ15_RS02530	COG0438	transferase activity, transferring glycosyl groups
CYJ15_RS02540	COG1442	glycosyl transferase family 8
CYJ15_RS02540	COG1216	Glycosyl transferase, family 2
CYJ15_RS02570	COG1070	Carbohydrate kinase
CYJ15_RS02585	COG1070	Carbohydrate kinase
CYJ15_RS02595	COG1940	carbohydrate kinase activity
CYJ15_RS02605	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CYJ15_RS02625	COG4193	domain, Protein
CYJ15_RS02645	COG5504	Zn-dependent protease
CYJ15_RS02650	COG2226	methyltransferase
CYJ15_RS02705	COG3716	PTS system mannose fructose sorbose family IID component
CYJ15_RS02710	COG3715	PTS system
CYJ15_RS02715	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CYJ15_RS02720	COG0363	glucosamine-6-phosphate deaminase activity
CYJ15_RS02725	COG2188	Transcriptional regulator
CYJ15_RS02730	COG1396	sequence-specific DNA binding
CYJ15_RS02750	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
CYJ15_RS02755	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CYJ15_RS02760	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CYJ15_RS02760	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CYJ15_RS02770	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CYJ15_RS02770	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CYJ15_RS02775	COG3715	PTS system
CYJ15_RS02780	COG3716	PTS system mannose fructose sorbose family IID component
CYJ15_RS02805	COG3414	Phosphotransferase system galactitol-specific IIB component
CYJ15_RS02810	COG3775	system Galactitol-specific IIC component
CYJ15_RS02820	COG1105	Belongs to the carbohydrate kinase PfkB family
CYJ15_RS02825	COG0235	Class ii aldolase
CYJ15_RS02845	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CYJ15_RS02855	COG0145	ligase activity
CYJ15_RS02865	COG2315	Protein conserved in bacteria
CYJ15_RS02880	COG2333	competence protein COMEC
CYJ15_RS02880	COG0658	competence protein
CYJ15_RS02905	COG0531	amino acid
CYJ15_RS02915	COG1316	TRANSCRIPTIONal
CYJ15_RS02925	COG4989	oxidoreductase activity
CYJ15_RS02950	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CYJ15_RS02955	COG2130	NADP-dependent
CYJ15_RS02970	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CYJ15_RS02970	COG3711	transcriptional antiterminator
CYJ15_RS02975	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CYJ15_RS02980	COG1447	Phosphotransferase system cellobiose-specific component IIA
CYJ15_RS02990	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CYJ15_RS02995	COG2211	Major facilitator Superfamily
CYJ15_RS02995	COG2190	(PTS) system
CYJ15_RS03000	COG1113	amino acid transport
CYJ15_RS03015	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CYJ15_RS03025	COG2814	Major facilitator Superfamily
CYJ15_RS03030	COG1609	Transcriptional regulator
CYJ15_RS03045	COG1174	glycine betaine transport
CYJ15_RS03055	COG1732	Glycine betaine
CYJ15_RS03060	COG1174	glycine betaine transport
CYJ15_RS03065	COG1125	glycine betaine transport
CYJ15_RS03065	COG0517	IMP dehydrogenase activity
CYJ15_RS03070	COG1510	regulation of RNA biosynthetic process
CYJ15_RS03075	COG0110	maltose O-acetyltransferase activity
CYJ15_RS03080	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS03095	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CYJ15_RS03110	COG4297	protein containing double-stranded beta helix domain
CYJ15_RS03120	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CYJ15_RS03140	COG0606	chelatase, subunit chli
CYJ15_RS03150	COG0371	Dehydrogenase
CYJ15_RS03155	COG2814	Major facilitator Superfamily
CYJ15_RS03160	COG1070	Carbohydrate kinase
CYJ15_RS03165	COG2115	Belongs to the xylose isomerase family
CYJ15_RS03180	COG0157	Belongs to the NadC ModD family
CYJ15_RS03185	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CYJ15_RS03190	COG1104	cysteine desulfurase activity
CYJ15_RS03200	COG2116	formate transmembrane transporter activity
CYJ15_RS03230	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS03235	COG2610	gluconate transmembrane transporter activity
CYJ15_RS03240	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS03250	COG3829	transcription factor binding
CYJ15_RS03250	COG3290	protein histidine kinase activity
CYJ15_RS03260	COG1501	Belongs to the glycosyl hydrolase 31 family
CYJ15_RS03285	COG1309	transcriptional regulator
CYJ15_RS03310	COG1363	Peptidase, m42
CYJ15_RS03355	COG2972	Histidine kinase
CYJ15_RS03375	COG0531	amino acid
CYJ15_RS03385	COG1620	l-lactate permease
CYJ15_RS03390	COG2186	Transcriptional regulator
CYJ15_RS03420	COG0473	3-isopropylmalate dehydrogenase activity
CYJ15_RS03455	COG1447	Phosphotransferase system cellobiose-specific component IIA
CYJ15_RS03470	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CYJ15_RS03470	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CYJ15_RS03475	COG2723	6-phospho-beta-galactosidase activity
CYJ15_RS03480	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CYJ15_RS03480	COG3711	transcriptional antiterminator
CYJ15_RS03485	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CYJ15_RS03495	COG1131	(ABC) transporter
CYJ15_RS03505	COG0626	cystathionine gamma-synthase activity
CYJ15_RS03510	COG0626	cystathionine gamma-synthase activity
CYJ15_RS03530	COG1653	transport
CYJ15_RS03535	COG2207	Transcriptional regulator
CYJ15_RS03550	COG0604	alcohol dehydrogenase
CYJ15_RS03555	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CYJ15_RS03560	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CYJ15_RS03585	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS03590	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CYJ15_RS03600	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CYJ15_RS03610	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CYJ15_RS03615	COG1316	TRANSCRIPTIONal
CYJ15_RS03625	COG1136	(ABC) transporter
CYJ15_RS03630	COG0577	efflux transmembrane transporter activity
CYJ15_RS03630	COG1136	(ABC) transporter
CYJ15_RS03635	COG0745	RESPONSE REGULATOR receiver
CYJ15_RS03640	COG5002	protein histidine kinase activity
CYJ15_RS03650	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CYJ15_RS03665	COG1388	LysM domain
CYJ15_RS03665	COG3584	3D domain protein
CYJ15_RS03675	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CYJ15_RS03685	COG0011	TIGRFAM Protein of
CYJ15_RS03690	COG2706	6-phosphogluconolactonase activity
CYJ15_RS03700	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CYJ15_RS03700	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CYJ15_RS03705	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CYJ15_RS03705	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CYJ15_RS03715	COG3715	PTS system
CYJ15_RS03720	COG3716	PTS system mannose fructose sorbose family IID component
CYJ15_RS03735	COG2079	MmgE PrpD family protein
CYJ15_RS03740	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CYJ15_RS03750	COG0154	amidase activity
CYJ15_RS03760	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CYJ15_RS03765	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CYJ15_RS03770	COG1116	anion transmembrane transporter activity
CYJ15_RS03775	COG0083	homoserine kinase activity
CYJ15_RS03780	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CYJ15_RS03785	COG0460	homoserine dehydrogenase
CYJ15_RS03790	COG0010	Belongs to the arginase family
CYJ15_RS03800	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CYJ15_RS03805	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CYJ15_RS03815	COG4145	pantothenate transmembrane transporter activity
CYJ15_RS03830	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS03830	COG1454	alcohol dehydrogenase
CYJ15_RS03845	COG0791	NLP P60 protein
CYJ15_RS03845	COG1388	LysM domain
CYJ15_RS03850	COG0024	Methionine aminopeptidase
CYJ15_RS03855	COG1268	BioY protein
CYJ15_RS03865	COG0318	PFAM AMP-dependent synthetase and ligase
CYJ15_RS03870	COG1960	acyl-CoA dehydrogenase activity
CYJ15_RS03875	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS03880	COG2746	aminoglycoside 3-N-acetyltransferase activity
CYJ15_RS03885	COG2244	polysaccharide biosynthetic process
CYJ15_RS03890	COG0589	response to stress
CYJ15_RS03905	COG0535	radical SAM domain protein
CYJ15_RS03915	COG0457	Tetratricopeptide repeat
CYJ15_RS03920	COG1063	alcohol dehydrogenase
CYJ15_RS03935	COG1609	Transcriptional regulator
CYJ15_RS03945	COG0561	phosphatase activity
CYJ15_RS03965	COG0656	L-ascorbic acid biosynthetic process
CYJ15_RS03980	COG0656	L-ascorbic acid biosynthetic process
CYJ15_RS03985	COG0431	NADPH-dependent FMN reductase
CYJ15_RS03990	COG0420	3'-5' exonuclease activity
CYJ15_RS03995	COG4717	serine-type aminopeptidase activity
CYJ15_RS04000	COG1250	3-hydroxyacyl-CoA dehydrogenase
CYJ15_RS04005	COG0534	Mate efflux family protein
CYJ15_RS04025	COG0789	Transcriptional regulator
CYJ15_RS04030	COG0436	Aminotransferase
CYJ15_RS04035	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CYJ15_RS04045	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CYJ15_RS04055	COG2226	methyltransferase
CYJ15_RS04080	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CYJ15_RS04115	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CYJ15_RS04120	COG1113	amino acid transport
CYJ15_RS04125	COG2814	Major facilitator Superfamily
CYJ15_RS04140	COG2409	Drug exporters of the RND superfamily
CYJ15_RS04140	COG1033	growth of symbiont in host cell
CYJ15_RS04145	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CYJ15_RS04160	COG1960	acyl-CoA dehydrogenase activity
CYJ15_RS04180	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CYJ15_RS04185	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
CYJ15_RS04200	COG1609	Transcriptional regulator
CYJ15_RS04215	COG2996	Protein conserved in bacteria
CYJ15_RS04220	COG0346	lactoylglutathione lyase activity
CYJ15_RS04225	COG1482	cell wall glycoprotein biosynthetic process
CYJ15_RS04235	COG0477	Major facilitator Superfamily
CYJ15_RS04240	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CYJ15_RS04250	COG2188	Transcriptional regulator
CYJ15_RS04265	COG0768	penicillin binding
CYJ15_RS04275	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CYJ15_RS04280	COG1739	Uncharacterized protein family UPF0029
CYJ15_RS04295	COG0531	amino acid
CYJ15_RS04300	COG1307	EDD domain protein, DegV family
CYJ15_RS04305	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CYJ15_RS04310	COG1040	competence protein
CYJ15_RS04320	COG2747	anti-sigma28 factor FlgM
CYJ15_RS04330	COG1256	bacterial-type flagellum assembly
CYJ15_RS04330	COG4786	Flagellar basal body rod
CYJ15_RS04335	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CYJ15_RS04345	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CYJ15_RS04365	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CYJ15_RS04370	COG1285	pathogenesis
CYJ15_RS04375	COG0647	UMP catabolic process
CYJ15_RS04385	COG2271	Major facilitator Superfamily
CYJ15_RS04390	COG1113	amino acid transport
CYJ15_RS04400	COG1067	ATP-dependent peptidase activity
CYJ15_RS04410	COG2094	Belongs to the DNA glycosylase MPG family
CYJ15_RS04425	COG1334	flagellar protein FlaG
CYJ15_RS04430	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CYJ15_RS04435	COG1516	flagellar protein fliS
CYJ15_RS04460	COG0653	protein targeting
CYJ15_RS04470	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CYJ15_RS04480	COG2884	Cell division ATP-binding protein ftsE
CYJ15_RS04485	COG2177	Part of the ABC transporter FtsEX involved in
CYJ15_RS04490	COG0739	heme binding
CYJ15_RS04505	COG0460	homoserine dehydrogenase
CYJ15_RS04515	COG0793	Belongs to the peptidase S41A family
CYJ15_RS04515	COG3409	Peptidoglycan-binding domain 1 protein
CYJ15_RS04525	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CYJ15_RS04530	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CYJ15_RS04535	COG4605	iron ion homeostasis
CYJ15_RS04540	COG4604	ABC transporter, ATP-binding protein
CYJ15_RS04545	COG4607	ABC-type enterochelin transport system periplasmic component
CYJ15_RS04560	COG0745	RESPONSE REGULATOR receiver
CYJ15_RS04565	COG5002	protein histidine kinase activity
CYJ15_RS04570	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CYJ15_RS04580	COG0573	inorganic phosphate transmembrane transporter activity
CYJ15_RS04585	COG0581	inorganic phosphate transmembrane transporter activity
CYJ15_RS04600	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CYJ15_RS04645	COG0556	nucleotide-excision repair
CYJ15_RS04650	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CYJ15_RS04655	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CYJ15_RS04665	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CYJ15_RS04670	COG1682	transport, permease protein
CYJ15_RS04675	COG0463	Glycosyl transferase, family 2
CYJ15_RS04675	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CYJ15_RS04680	COG3595	metallopeptidase activity
CYJ15_RS04695	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CYJ15_RS04700	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CYJ15_RS04705	COG0546	phosphoglycolate phosphatase activity
CYJ15_RS04710	COG0110	maltose O-acetyltransferase activity
CYJ15_RS04715	COG0457	Tetratricopeptide repeat
CYJ15_RS04720	COG0492	ferredoxin-NADP+ reductase activity
CYJ15_RS04735	COG1051	belongs to the nudix hydrolase family
CYJ15_RS04740	COG1660	Displays ATPase and GTPase activities
CYJ15_RS04745	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CYJ15_RS04750	COG1481	regulation of sporulation
CYJ15_RS04755	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CYJ15_RS04790	COG3842	ATPase activity
CYJ15_RS04795	COG2508	Transcriptional regulator
CYJ15_RS04805	COG0189	ligase activity
CYJ15_RS04810	COG0189	ligase activity
CYJ15_RS04825	COG4399	Belongs to the UPF0754 family
CYJ15_RS04835	COG0561	phosphatase activity
CYJ15_RS04840	COG1024	Enoyl-CoA hydratase
CYJ15_RS04850	COG0861	Integral membrane protein TerC family
CYJ15_RS04855	COG0701	Predicted permease
CYJ15_RS04860	COG3689	TIGRFAM TIGR03943 family protein
CYJ15_RS04865	COG0420	3'-5' exonuclease activity
CYJ15_RS04870	COG4717	serine-type aminopeptidase activity
CYJ15_RS04875	COG3481	metal-dependent phosphohydrolase, HD sub domain
CYJ15_RS04885	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CYJ15_RS04900	COG1846	Transcriptional regulator
CYJ15_RS04920	COG0537	adenosine 5'-monophosphoramidase activity
CYJ15_RS04925	COG1131	(ABC) transporter
CYJ15_RS04930	COG4473	ABC transporter
CYJ15_RS04940	COG1473	amidohydrolase
CYJ15_RS04945	COG3069	C4-dicarboxylate transmembrane transporter activity
CYJ15_RS04950	COG2329	Antibiotic biosynthesis monooxygenase
CYJ15_RS04955	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CYJ15_RS04960	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CYJ15_RS04965	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CYJ15_RS04970	COG1309	transcriptional regulator
CYJ15_RS04975	COG1511	domain protein
CYJ15_RS04980	COG2190	(PTS) system
CYJ15_RS04980	COG1263	PTS System
CYJ15_RS04980	COG1263	PTS System
CYJ15_RS04980	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CYJ15_RS04980	COG2190	(PTS) system
CYJ15_RS04980	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CYJ15_RS04985	COG1349	DNA-binding transcription factor activity
CYJ15_RS04990	COG3254	rhamnose metabolic process
CYJ15_RS04995	COG2814	Major facilitator Superfamily
CYJ15_RS05000	COG0697	spore germination
CYJ15_RS05005	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS05010	COG1999	signal sequence binding
CYJ15_RS05025	COG0095	Lipoate-protein ligase
CYJ15_RS05030	COG0318	PFAM AMP-dependent synthetase and ligase
CYJ15_RS05040	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CYJ15_RS05050	COG0501	Belongs to the peptidase M48B family
CYJ15_RS05075	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
CYJ15_RS05080	COG1074	ATP-dependent DNA helicase activity
CYJ15_RS05115	COG2311	Membrane
CYJ15_RS05120	COG0179	Fumarylacetoacetate (FAA) hydrolase
CYJ15_RS05135	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS05140	COG1307	EDD domain protein, DegV family
CYJ15_RS05150	COG0561	phosphatase activity
CYJ15_RS05155	COG2151	metal-sulfur cluster biosynthetic enzyme
CYJ15_RS05185	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CYJ15_RS05190	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CYJ15_RS05205	COG4608	Belongs to the ABC transporter superfamily
CYJ15_RS05210	COG0601	transmembrane transport
CYJ15_RS05220	COG0747	negative chemotaxis
CYJ15_RS05235	COG0180	Tryptophanyl-tRNA synthetase
CYJ15_RS05250	COG4166	transmembrane transport
CYJ15_RS05255	COG0601	transmembrane transport
CYJ15_RS05260	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CYJ15_RS05265	COG0444	Belongs to the ABC transporter superfamily
CYJ15_RS05270	COG4608	Belongs to the ABC transporter superfamily
CYJ15_RS05275	COG1393	Belongs to the ArsC family
CYJ15_RS05285	COG4862	establishment of competence for transformation
CYJ15_RS05290	COG4469	Competence protein
CYJ15_RS05305	COG1164	Oligoendopeptidase f
CYJ15_RS05315	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CYJ15_RS05320	COG2346	COG2346, Truncated hemoglobins
CYJ15_RS05335	COG0741	lytic transglycosylase activity
CYJ15_RS05350	COG2357	RelA SpoT domain protein
CYJ15_RS05360	COG0564	pseudouridine synthase activity
CYJ15_RS05370	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CYJ15_RS05375	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CYJ15_RS05410	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CYJ15_RS05445	COG2153	protein acetylation
CYJ15_RS05455	COG2382	esterase
CYJ15_RS05465	COG4193	domain, Protein
CYJ15_RS05475	COG2188	Transcriptional regulator
CYJ15_RS05500	COG1840	ABC-type Fe3 transport system, periplasmic component
CYJ15_RS05505	COG3842	ATPase activity
CYJ15_RS05515	COG1177	transmembrane transport
CYJ15_RS05565	COG1940	carbohydrate kinase activity
CYJ15_RS05575	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS05580	COG4152	abc transporter atp-binding protein
CYJ15_RS05585	COG1668	transmembrane transport
CYJ15_RS05600	COG3579	cysteine-type endopeptidase activity
CYJ15_RS05630	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CYJ15_RS05635	COG3344	reverse transcriptase
CYJ15_RS05640	COG2059	Chromate
CYJ15_RS05645	COG2059	Chromate
CYJ15_RS05650	COG1522	sequence-specific DNA binding
CYJ15_RS05655	COG0477	Major facilitator Superfamily
CYJ15_RS05660	COG0405	Gamma-glutamyltransferase
CYJ15_RS05665	COG0154	amidase activity
CYJ15_RS05690	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CYJ15_RS05695	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CYJ15_RS05720	COG3344	reverse transcriptase
CYJ15_RS05730	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CYJ15_RS05755	COG1609	Transcriptional regulator
CYJ15_RS05765	COG1554	hydrolase, family 65, central catalytic
CYJ15_RS05770	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CYJ15_RS05815	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS05835	COG1959	2 iron, 2 sulfur cluster binding
CYJ15_RS05845	COG0730	response to heat
CYJ15_RS05850	COG0783	Belongs to the Dps family
CYJ15_RS05855	COG0673	inositol 2-dehydrogenase activity
CYJ15_RS05860	COG3852	Histidine kinase
CYJ15_RS05865	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CYJ15_RS05875	COG0861	Integral membrane protein TerC family
CYJ15_RS05885	COG5002	protein histidine kinase activity
CYJ15_RS05890	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CYJ15_RS05910	COG0542	response to heat
CYJ15_RS05915	COG3949	Membrane
CYJ15_RS05930	COG4873	Protein conserved in bacteria
CYJ15_RS05945	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CYJ15_RS05960	COG2084	Dehydrogenase
CYJ15_RS05965	COG0436	Aminotransferase
CYJ15_RS05970	COG0835	chemotaxis
CYJ15_RS05970	COG0784	Response regulator, receiver
CYJ15_RS05980	COG2409	Drug exporters of the RND superfamily
CYJ15_RS05980	COG1033	growth of symbiont in host cell
CYJ15_RS06000	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS06010	COG4703	Protein of unknown function (DUF1797)
CYJ15_RS06015	COG0517	IMP dehydrogenase activity
CYJ15_RS06020	COG0583	DNA-binding transcription factor activity
CYJ15_RS06025	COG2171	N-acyltransferase activity
CYJ15_RS06030	COG1473	amidohydrolase
CYJ15_RS06045	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CYJ15_RS06090	COG1982	Orn Lys Arg decarboxylase major
CYJ15_RS06095	COG4476	Belongs to the UPF0223 family
CYJ15_RS06110	COG0483	inositol monophosphate 1-phosphatase activity
CYJ15_RS06120	COG1217	gtp-binding protein TYPA
CYJ15_RS06130	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CYJ15_RS06135	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CYJ15_RS06140	COG4838	Belongs to the UPF0358 family
CYJ15_RS06145	COG0772	Belongs to the SEDS family
CYJ15_RS06150	COG1612	heme a metabolic process
CYJ15_RS06155	COG0109	protoheme IX farnesyltransferase activity
CYJ15_RS06175	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CYJ15_RS06180	COG3336	cytochrome c oxidase
CYJ15_RS06190	COG2340	Cysteine-rich secretory protein family
CYJ15_RS06195	COG2050	protein possibly involved in aromatic compounds catabolism
CYJ15_RS06225	COG3679	Belongs to the UPF0342 family
CYJ15_RS06230	COG4471	UPF0298 protein
CYJ15_RS06245	COG0742	ribosomal rna small subunit methyltransferase
CYJ15_RS06250	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CYJ15_RS06255	COG3314	Sporulation integral membrane protein YlbJ
CYJ15_RS06260	COG1752	Esterase of the alpha-beta hydrolase superfamily
CYJ15_RS06265	COG3480	Lon protease (S16) C-terminal proteolytic domain
CYJ15_RS06275	COG1323	Belongs to the UPF0348 family
CYJ15_RS06280	COG1399	metal-binding, possibly nucleic acid-binding protein
CYJ15_RS06285	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CYJ15_RS06295	COG0454	-acetyltransferase
CYJ15_RS06300	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CYJ15_RS06305	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
CYJ15_RS06315	COG0275	rRNA processing
CYJ15_RS06320	COG4839	cell division protein FtsL
CYJ15_RS06325	COG0768	penicillin binding
CYJ15_RS06330	COG0768	penicillin binding
CYJ15_RS06345	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CYJ15_RS06350	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CYJ15_RS06355	COG0772	Belongs to the SEDS family
CYJ15_RS06360	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CYJ15_RS06365	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CYJ15_RS06370	COG0849	cell division
CYJ15_RS06375	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CYJ15_RS06390	COG1191	sigma factor activity
CYJ15_RS06395	COG1191	sigma factor activity
CYJ15_RS06400	COG1873	PFAM PRC-barrel domain
CYJ15_RS06405	COG3584	3D domain protein
CYJ15_RS06405	COG1388	LysM domain
CYJ15_RS06415	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CYJ15_RS06420	COG1799	cell septum assembly
CYJ15_RS06425	COG0762	integral membrane protein
CYJ15_RS06430	COG2302	S4 RNA-binding domain
CYJ15_RS06435	COG3599	regulation of cell shape
CYJ15_RS06455	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CYJ15_RS06460	COG0564	pseudouridine synthase activity
CYJ15_RS06470	COG0540	Belongs to the ATCase OTCase family
CYJ15_RS06475	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CYJ15_RS06495	COG0167	dihydroorotate dehydrogenase activity
CYJ15_RS06500	COG0284	orotidine-5'-phosphate decarboxylase activity
CYJ15_RS06505	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CYJ15_RS06530	COG1917	Cupin 2, conserved barrel domain protein
CYJ15_RS06530	COG2207	Transcriptional regulator
CYJ15_RS06535	COG1070	Carbohydrate kinase
CYJ15_RS06545	COG0235	Class ii aldolase
CYJ15_RS06550	COG1454	alcohol dehydrogenase
CYJ15_RS06555	COG1803	Methylglyoxal synthase
CYJ15_RS06560	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CYJ15_RS06565	COG0477	Major facilitator Superfamily
CYJ15_RS06570	COG0477	Major facilitator Superfamily
CYJ15_RS06575	COG1309	transcriptional regulator
CYJ15_RS06590	COG0628	permease
CYJ15_RS06595	COG0561	phosphatase activity
CYJ15_RS06615	COG1131	(ABC) transporter
CYJ15_RS06635	COG2207	Transcriptional regulator
CYJ15_RS06645	COG2376	Dihydroxyacetone kinase
CYJ15_RS06650	COG1461	Dihydroxyacetone kinase
CYJ15_RS06655	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
CYJ15_RS06665	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CYJ15_RS06670	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CYJ15_RS06680	COG1522	sequence-specific DNA binding
CYJ15_RS06690	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CYJ15_RS06700	COG1794	racemase activity, acting on amino acids and derivatives
CYJ15_RS06720	COG0720	synthase
CYJ15_RS06730	COG0385	Bile acid
CYJ15_RS06740	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CYJ15_RS06745	COG1561	YicC-like family, N-terminal region
CYJ15_RS06750	COG2052	Domain of unknown function (DUF370)
CYJ15_RS06755	COG0194	GDP metabolic process
CYJ15_RS06760	COG1758	RNA polymerase activity
CYJ15_RS06765	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CYJ15_RS06770	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CYJ15_RS06775	COG0242	peptide deformylase activity
CYJ15_RS06780	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CYJ15_RS06785	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CYJ15_RS06785	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CYJ15_RS06790	COG0631	protein serine/threonine phosphatase activity
CYJ15_RS06795	COG0515	serine threonine protein kinase
CYJ15_RS06795	COG2815	serine threonine protein kinase
CYJ15_RS06805	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CYJ15_RS06810	COG1564	THIamine pyrophosphokinase
CYJ15_RS06820	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CYJ15_RS06825	COG1302	Protein conserved in bacteria
CYJ15_RS06830	COG1461	Dihydroxyacetone kinase
CYJ15_RS06840	COG1760	l-serine dehydratase
CYJ15_RS06845	COG1760	l-serine dehydratase
CYJ15_RS06850	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CYJ15_RS06855	COG1349	DNA-binding transcription factor activity
CYJ15_RS06860	COG0416	fatty acid biosynthetic process
CYJ15_RS06865	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CYJ15_RS06870	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS06880	COG0571	ribonuclease III activity
CYJ15_RS06885	COG1196	nuclear chromosome segregation
CYJ15_RS06890	COG0552	protein localization to endoplasmic reticulum
CYJ15_RS06895	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CYJ15_RS06900	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CYJ15_RS06910	COG1837	Belongs to the UPF0109 family
CYJ15_RS06920	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CYJ15_RS06925	COG0336	Belongs to the RNA methyltransferase TrmD family
CYJ15_RS06940	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CYJ15_RS06955	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CYJ15_RS06960	COG0045	succinate-CoA ligase (ADP-forming) activity
CYJ15_RS06965	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CYJ15_RS06970	COG0758	DNA mediated transformation
CYJ15_RS06975	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CYJ15_RS06990	COG4974	Belongs to the 'phage' integrase family
CYJ15_RS06995	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CYJ15_RS07005	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
CYJ15_RS07010	COG1815	bacterial-type flagellum-dependent cell motility
CYJ15_RS07015	COG1558	bacterial-type flagellum-dependent cell motility
CYJ15_RS07020	COG1677	Flagellar hook-basal body complex protein FliE
CYJ15_RS07025	COG1766	The M ring may be actively involved in energy transduction
CYJ15_RS07030	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CYJ15_RS07035	COG1317	bacterial-type flagellum organization
CYJ15_RS07040	COG1157	protein secretion by the type III secretion system
CYJ15_RS07045	COG2882	bacterial-type flagellum organization
CYJ15_RS07060	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CYJ15_RS07070	COG4786	Flagellar basal body rod
CYJ15_RS07080	COG1580	Controls the rotational direction of flagella during chemotaxis
CYJ15_RS07085	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CYJ15_RS07090	COG1776	CheC inhibitor of MCP methylation
CYJ15_RS07090	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CYJ15_RS07095	COG2201	protein-glutamate methylesterase activity
CYJ15_RS07100	COG3190	flagellar
CYJ15_RS07105	COG1338	Plays a role in the flagellum-specific transport system
CYJ15_RS07110	COG1987	bacterial-type flagellum assembly
CYJ15_RS07115	COG1684	flagellar biosynthetic protein fliR
CYJ15_RS07120	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CYJ15_RS07125	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CYJ15_RS07130	COG1419	protein localization to endoplasmic reticulum
CYJ15_RS07135	COG0455	bacterial-type flagellum organization
CYJ15_RS07140	COG2201	protein-glutamate methylesterase activity
CYJ15_RS07145	COG0643	Histidine kinase
CYJ15_RS07145	COG2198	Histidine kinase
CYJ15_RS07150	COG0835	chemotaxis
CYJ15_RS07155	COG1776	CheC inhibitor of MCP methylation
CYJ15_RS07160	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CYJ15_RS07165	COG1191	sigma factor activity
CYJ15_RS07175	COG0052	Belongs to the universal ribosomal protein uS2 family
CYJ15_RS07180	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CYJ15_RS07185	COG0528	UMP kinase activity
CYJ15_RS07190	COG0233	cytoplasmic translational termination
CYJ15_RS07200	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CYJ15_RS07205	COG4589	Belongs to the CDS family
CYJ15_RS07215	COG0750	zinc metalloprotease
CYJ15_RS07220	COG0442	prolyl-tRNA aminoacylation
CYJ15_RS07225	COG2176	DNA-directed DNA polymerase activity
CYJ15_RS07230	COG0779	Required for maturation of 30S ribosomal subunits
CYJ15_RS07235	COG0195	Participates in both transcription termination and antitermination
CYJ15_RS07240	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CYJ15_RS07245	COG1358	cellular component organization or biogenesis
CYJ15_RS07255	COG1550	Protein conserved in bacteria
CYJ15_RS07260	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CYJ15_RS07265	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CYJ15_RS07270	COG0196	riboflavin kinase activity
CYJ15_RS07275	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CYJ15_RS07280	COG1185	polyribonucleotide nucleotidyltransferase activity
CYJ15_RS07285	COG0726	polysaccharide deacetylase
CYJ15_RS07290	COG0612	Peptidase, M16
CYJ15_RS07295	COG1873	PFAM PRC-barrel domain
CYJ15_RS07300	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CYJ15_RS07305	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CYJ15_RS07310	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CYJ15_RS07320	COG0527	aspartate kinase activity
CYJ15_RS07330	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CYJ15_RS07335	COG0740	serine-type endopeptidase activity
CYJ15_RS07345	COG4980	gas vesicle protein
CYJ15_RS07345	COG1674	ftsk spoiiie
CYJ15_RS07350	COG1744	ABC transporter substrate-binding protein PnrA-like
CYJ15_RS07355	COG3845	ABC transporter
CYJ15_RS07360	COG4603	Belongs to the binding-protein-dependent transport system permease family
CYJ15_RS07365	COG1079	Belongs to the binding-protein-dependent transport system permease family
CYJ15_RS07370	COG0612	Peptidase, M16
CYJ15_RS07375	COG0612	Peptidase, M16
CYJ15_RS07380	COG0300	oxidoreductase activity
CYJ15_RS07395	COG1426	Protein conserved in bacteria
CYJ15_RS07400	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CYJ15_RS07405	COG1546	Belongs to the CinA family
CYJ15_RS07405	COG1058	Belongs to the CinA family
CYJ15_RS07415	COG1418	mRNA catabolic process
CYJ15_RS07420	COG1692	metallophosphoesterase
CYJ15_RS07425	COG2359	stage V sporulation protein S
CYJ15_RS07430	COG0826	peptidase U32
CYJ15_RS07435	COG0826	peptidase U32
CYJ15_RS07440	COG0531	amino acid
CYJ15_RS07445	COG3829	transcription factor binding
CYJ15_RS07450	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS07460	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CYJ15_RS07465	COG4550	Control of competence regulator ComK, YlbF/YmcA
CYJ15_RS07475	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CYJ15_RS07480	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CYJ15_RS07510	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CYJ15_RS07525	COG0464	growth
CYJ15_RS07530	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CYJ15_RS07535	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CYJ15_RS07540	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CYJ15_RS07560	COG1321	iron dependent repressor
CYJ15_RS07570	COG2759	Belongs to the formate--tetrahydrofolate ligase family
CYJ15_RS07580	COG1418	mRNA catabolic process
CYJ15_RS07585	COG0488	(ABC) transporter
CYJ15_RS07590	COG1413	lyase activity
CYJ15_RS07605	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CYJ15_RS07610	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CYJ15_RS07615	COG1272	protein, Hemolysin III
CYJ15_RS07620	COG2755	lipolytic protein G-D-S-L family
CYJ15_RS07630	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CYJ15_RS07630	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
CYJ15_RS07635	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CYJ15_RS07640	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CYJ15_RS07650	COG0840	transmembrane signaling receptor activity
CYJ15_RS07655	COG4479	Belongs to the UPF0346 family
CYJ15_RS07675	COG1876	peptidase activity
CYJ15_RS07690	COG3409	Peptidoglycan-binding domain 1 protein
CYJ15_RS07690	COG0793	Belongs to the peptidase S41A family
CYJ15_RS07695	COG1846	Transcriptional regulator
CYJ15_RS07700	COG2340	Cysteine-rich secretory protein family
CYJ15_RS07705	COG0534	Mate efflux family protein
CYJ15_RS07720	COG1793	dna ligase
CYJ15_RS07720	COG3285	dna ligase
CYJ15_RS07725	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CYJ15_RS07730	COG0671	phosphoesterase, PA-phosphatase related
CYJ15_RS07735	COG1368	sulfuric ester hydrolase activity
CYJ15_RS07750	COG1331	Highly conserved protein containing a thioredoxin domain
CYJ15_RS07755	COG2814	Major facilitator Superfamily
CYJ15_RS07765	COG0745	RESPONSE REGULATOR receiver
CYJ15_RS07770	COG5002	protein histidine kinase activity
CYJ15_RS07780	COG0567	Dehydrogenase, E1 component
CYJ15_RS07785	COG0508	dehydrogenase complex catalyzes the overall conversion of
CYJ15_RS07790	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS07810	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CYJ15_RS07820	COG1054	Belongs to the UPF0176 family
CYJ15_RS07830	COG2135	peptidase activity
CYJ15_RS07840	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CYJ15_RS07845	COG0516	GMP reductase activity
CYJ15_RS07845	COG0517	IMP dehydrogenase activity
CYJ15_RS07850	COG0723	plastoquinol--plastocyanin reductase activity
CYJ15_RS07850	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CYJ15_RS07855	COG1388	LysM domain
CYJ15_RS07855	COG3584	3D domain protein
CYJ15_RS07860	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CYJ15_RS07865	COG1113	amino acid transport
CYJ15_RS07870	COG1280	lysine exporter protein (LysE YggA)
CYJ15_RS07875	COG0598	Magnesium transport protein CorA
CYJ15_RS07885	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CYJ15_RS07890	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CYJ15_RS07895	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CYJ15_RS07900	COG0131	Imidazoleglycerol-phosphate dehydratase
CYJ15_RS07905	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CYJ15_RS07915	COG0107	imidazoleglycerol-phosphate synthase activity
CYJ15_RS07920	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CYJ15_RS07920	COG0140	phosphoribosyl-ATP diphosphatase activity
CYJ15_RS07930	COG2391	methyltransferase activity
CYJ15_RS07935	COG2962	Rard protein
CYJ15_RS07940	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CYJ15_RS07945	COG0569	domain protein
CYJ15_RS07965	COG2807	transmembrane transport
CYJ15_RS07970	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CYJ15_RS07980	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CYJ15_RS07990	COG1278	Cold shock
CYJ15_RS07995	COG0302	gtp cyclohydrolase
CYJ15_RS08000	COG0492	ferredoxin-NADP+ reductase activity
CYJ15_RS08015	COG0577	efflux transmembrane transporter activity
CYJ15_RS08020	COG1136	(ABC) transporter
CYJ15_RS08025	COG0642	Histidine kinase
CYJ15_RS08030	COG0745	RESPONSE REGULATOR receiver
CYJ15_RS08045	COG0640	Transcriptional regulator
CYJ15_RS08050	COG2814	Major facilitator Superfamily
CYJ15_RS08055	COG5039	Polysaccharide pyruvyl transferase
CYJ15_RS08060	COG1113	amino acid transport
CYJ15_RS08075	COG0477	Major facilitator Superfamily
CYJ15_RS08085	COG1132	(ABC) transporter
CYJ15_RS08090	COG1132	(ABC) transporter
CYJ15_RS08100	COG1380	Effector of murein hydrolase LrgA
CYJ15_RS08105	COG1346	cytolysis
CYJ15_RS08110	COG0318	PFAM AMP-dependent synthetase and ligase
CYJ15_RS08135	COG2309	aminopeptidase activity
CYJ15_RS08145	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CYJ15_RS08165	COG0824	Thioesterase
CYJ15_RS08175	COG4841	protein insertion into membrane
CYJ15_RS08180	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CYJ15_RS08185	COG1832	CoA-binding protein
CYJ15_RS08190	COG0187	DNA topoisomerase II activity
CYJ15_RS08195	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CYJ15_RS08210	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CYJ15_RS08215	COG0574	Belongs to the PEP-utilizing enzyme family
CYJ15_RS08215	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CYJ15_RS08240	COG2070	2-Nitropropane dioxygenase
CYJ15_RS08250	COG0681	Belongs to the peptidase S26 family
CYJ15_RS08260	COG0473	3-isopropylmalate dehydrogenase activity
CYJ15_RS08270	COG2226	methyltransferase
CYJ15_RS08295	COG0456	acetyltransferase
CYJ15_RS08300	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CYJ15_RS08305	COG0456	acetyltransferase
CYJ15_RS08340	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CYJ15_RS08345	COG0351	phosphomethylpyrimidine kinase
CYJ15_RS08350	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS08355	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CYJ15_RS08360	COG0351	phosphomethylpyrimidine kinase
CYJ15_RS08370	COG2258	MOSC domain
CYJ15_RS08410	COG1309	transcriptional regulator
CYJ15_RS08415	COG2814	Major facilitator Superfamily
CYJ15_RS08420	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CYJ15_RS08425	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CYJ15_RS08435	COG1809	phosphosulfolactate synthase activity
CYJ15_RS08440	COG2045	Belongs to the ComB family
CYJ15_RS08445	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CYJ15_RS08450	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CYJ15_RS08460	COG0789	Transcriptional regulator
CYJ15_RS08465	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CYJ15_RS08470	COG0697	spore germination
CYJ15_RS08475	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CYJ15_RS08480	COG0022	dehydrogenase e1 component
CYJ15_RS08485	COG0508	dehydrogenase complex catalyzes the overall conversion of
CYJ15_RS08490	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CYJ15_RS08495	COG3284	Transcriptional regulator
CYJ15_RS08500	COG3264	Mechanosensitive ion channel
CYJ15_RS08500	COG1511	domain protein
CYJ15_RS08515	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CYJ15_RS08525	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CYJ15_RS08540	COG0183	Belongs to the thiolase family
CYJ15_RS08545	COG0318	PFAM AMP-dependent synthetase and ligase
CYJ15_RS08555	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CYJ15_RS08560	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CYJ15_RS08565	COG2508	Transcriptional regulator
CYJ15_RS08570	COG2233	PERMEase
CYJ15_RS08580	COG2072	flavoprotein involved in K transport
CYJ15_RS08590	COG0561	phosphatase activity
CYJ15_RS08595	COG2322	membrane
CYJ15_RS08610	COG0039	L-malate dehydrogenase activity
CYJ15_RS08615	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS08620	COG2223	nitrite transmembrane transporter activity
CYJ15_RS08625	COG3773	Cell wall hydrolase
CYJ15_RS08635	COG0708	Exodeoxyribonuclease III
CYJ15_RS08645	COG0297	glycogen (starch) synthase activity
CYJ15_RS08650	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CYJ15_RS08655	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CYJ15_RS08660	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CYJ15_RS08685	COG1247	-acetyltransferase
CYJ15_RS08690	COG0494	nUDIX hydrolase
CYJ15_RS08695	COG1914	H( )-stimulated, divalent metal cation uptake system
CYJ15_RS08700	COG0783	Belongs to the Dps family
CYJ15_RS08710	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CYJ15_RS08715	COG1131	(ABC) transporter
CYJ15_RS08740	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CYJ15_RS08750	COG2030	dehydratase
CYJ15_RS08755	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS08760	COG0277	FAD linked oxidase domain protein
CYJ15_RS08770	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
CYJ15_RS08775	COG0709	Synthesizes selenophosphate from selenide and ATP
CYJ15_RS08785	COG0701	Predicted permease
CYJ15_RS08790	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CYJ15_RS08795	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CYJ15_RS08805	COG1252	NADH dehydrogenase
CYJ15_RS08810	COG2404	hydrolase activity, acting on ester bonds
CYJ15_RS08820	COG4990	cell redox homeostasis
CYJ15_RS08825	COG0789	Transcriptional regulator
CYJ15_RS08850	COG0436	Aminotransferase
CYJ15_RS08855	COG0165	Argininosuccinate lyase
CYJ15_RS08860	COG0137	argininosuccinate synthase activity
CYJ15_RS08865	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CYJ15_RS08870	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CYJ15_RS08875	COG0505	Belongs to the CarA family
CYJ15_RS08880	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CYJ15_RS08885	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CYJ15_RS08890	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CYJ15_RS08895	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CYJ15_RS08910	COG3546	catalase activity
CYJ15_RS08930	COG1619	proteins homologs of microcin C7 resistance protein MccF
CYJ15_RS08935	COG2027	D-alanyl-D-alanine carboxypeptidase
CYJ15_RS08940	COG0204	Acyl-transferase
CYJ15_RS08950	COG4846	Membrane protein involved in cytochrome C biogenesis
CYJ15_RS08955	COG2201	protein-glutamate methylesterase activity
CYJ15_RS08960	COG0785	Cytochrome C biogenesis protein
CYJ15_RS08965	COG3763	UPF0154 protein
CYJ15_RS08980	COG4224	UPF0291 protein
CYJ15_RS08985	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CYJ15_RS08995	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CYJ15_RS09000	COG0174	glutamine synthetase
CYJ15_RS09005	COG0789	Transcriptional regulator
CYJ15_RS09010	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CYJ15_RS09025	COG2233	PERMEase
CYJ15_RS09040	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CYJ15_RS09045	COG0116	Belongs to the methyltransferase superfamily
CYJ15_RS09060	COG4474	Belongs to the UPF0398 family
CYJ15_RS09070	COG3359	exonuclease
CYJ15_RS09075	COG1205	dead DEAH box helicase
CYJ15_RS09075	COG1111	helicase
CYJ15_RS09080	COG0071	Belongs to the small heat shock protein (HSP20) family
CYJ15_RS09105	COG3331	DNA recombination
CYJ15_RS09110	COG4499	WXG100 protein secretion system (Wss), protein YukC
CYJ15_RS09110	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CYJ15_RS09115	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CYJ15_RS09120	COG3935	DnaD domain protein
CYJ15_RS09125	COG3344	reverse transcriptase
CYJ15_RS09130	COG0017	Asparaginyl-tRNA synthetase
CYJ15_RS09145	COG1199	ATP-dependent helicase activity
CYJ15_RS09145	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CYJ15_RS09150	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CYJ15_RS09155	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CYJ15_RS09175	COG0438	transferase activity, transferring glycosyl groups
CYJ15_RS09180	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CYJ15_RS09185	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CYJ15_RS09190	COG1694	Mazg nucleotide pyrophosphohydrolase
CYJ15_RS09195	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CYJ15_RS09205	COG2738	Putative neutral zinc metallopeptidase
CYJ15_RS09215	COG4347	Protein of unknown function (DUF1405)
CYJ15_RS09225	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CYJ15_RS09240	COG5582	Belongs to the UPF0302 family
CYJ15_RS09245	COG0457	Tetratricopeptide repeat
CYJ15_RS09255	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CYJ15_RS09260	COG0287	Prephenate dehydrogenase
CYJ15_RS09265	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CYJ15_RS09270	COG4401	Chorismate mutase type I
CYJ15_RS09275	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CYJ15_RS09280	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CYJ15_RS09285	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CYJ15_RS09290	COG0105	UTP biosynthetic process
CYJ15_RS09295	COG0142	geranyltranstransferase activity
CYJ15_RS09305	COG0142	geranyltranstransferase activity
CYJ15_RS09320	COG0776	regulation of translation
CYJ15_RS09325	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CYJ15_RS09345	COG1160	GTP binding
CYJ15_RS09360	COG0539	negative regulation of cytoplasmic translation
CYJ15_RS09365	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CYJ15_RS09370	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CYJ15_RS09375	COG2959	enzyme of heme biosynthesis
CYJ15_RS09380	COG3409	Peptidoglycan-binding domain 1 protein
CYJ15_RS09380	COG3773	Cell wall hydrolase
CYJ15_RS09385	COG2339	peptidase activity
CYJ15_RS09390	COG0492	ferredoxin-NADP+ reductase activity
CYJ15_RS09395	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CYJ15_RS09405	COG1408	metallophosphoesterase
CYJ15_RS09420	COG3546	catalase activity
CYJ15_RS09435	COG1266	CAAX protease self-immunity
CYJ15_RS09440	COG0514	ATP-dependent DNA helicase (RecQ)
CYJ15_RS09450	COG1141	Ferredoxin
CYJ15_RS09455	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CYJ15_RS09460	COG0741	lytic transglycosylase activity
CYJ15_RS09460	COG0739	heme binding
CYJ15_RS09460	COG1196	nuclear chromosome segregation
CYJ15_RS09465	COG5002	protein histidine kinase activity
CYJ15_RS09470	COG0745	RESPONSE REGULATOR receiver
CYJ15_RS09475	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CYJ15_RS09480	COG1333	cytochrome c biogenesis protein
CYJ15_RS09485	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CYJ15_RS09490	COG1187	pseudouridine synthase activity
CYJ15_RS09495	COG0700	Nucleoside recognition
CYJ15_RS09500	COG2715	membrane protein required for spore maturation
CYJ15_RS09505	COG1686	Belongs to the peptidase S11 family
CYJ15_RS09510	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CYJ15_RS09535	COG0697	spore germination
CYJ15_RS09555	COG1191	sigma factor activity
CYJ15_RS09570	COG1686	Belongs to the peptidase S11 family
CYJ15_RS09575	COG4974	Belongs to the 'phage' integrase family
CYJ15_RS09585	COG0735	belongs to the Fur family
CYJ15_RS09590	COG1300	Membrane
CYJ15_RS09595	COG1379	DNA repair
CYJ15_RS09610	COG0667	Aldo Keto reductase
CYJ15_RS09620	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
CYJ15_RS09625	COG3853	Toxic anion resistance protein (TelA)
CYJ15_RS09630	COG1073	alpha beta
CYJ15_RS09635	COG3858	chitin binding
CYJ15_RS09635	COG1388	LysM domain
CYJ15_RS09645	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CYJ15_RS09650	COG0300	oxidoreductase activity
CYJ15_RS09670	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CYJ15_RS09680	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CYJ15_RS09685	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CYJ15_RS09695	COG2195	Cleaves the N-terminal amino acid of tripeptides
CYJ15_RS09705	COG1376	ErfK ybiS ycfS ynhG family protein
CYJ15_RS09715	COG1105	Belongs to the carbohydrate kinase PfkB family
CYJ15_RS09720	COG0508	dehydrogenase complex catalyzes the overall conversion of
CYJ15_RS09725	COG0022	dehydrogenase e1 component
CYJ15_RS09730	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CYJ15_RS09735	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CYJ15_RS09755	COG0584	glycerophosphoryl diester phosphodiesterase
CYJ15_RS09760	COG0745	RESPONSE REGULATOR receiver
CYJ15_RS09770	COG0750	zinc metalloprotease
CYJ15_RS09775	COG0497	DNA recombination
CYJ15_RS09785	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CYJ15_RS09790	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CYJ15_RS09805	COG1570	exodeoxyribonuclease VII activity
CYJ15_RS09820	COG1302	Protein conserved in bacteria
CYJ15_RS09825	COG0439	Biotin carboxylase
CYJ15_RS09830	COG0511	ligase activity, forming carbon-carbon bonds
CYJ15_RS09870	COG3854	ATPases associated with a variety of cellular activities
CYJ15_RS09875	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CYJ15_RS09880	COG0006	proline dipeptidase activity
CYJ15_RS09885	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CYJ15_RS09895	COG3872	metal-dependent enzyme
CYJ15_RS09905	COG1752	Esterase of the alpha-beta hydrolase superfamily
CYJ15_RS09915	COG3327	negative regulation of DNA-templated transcription, initiation
CYJ15_RS09920	COG0183	Belongs to the thiolase family
CYJ15_RS09925	COG1250	3-hydroxyacyl-CoA dehydrogenase
CYJ15_RS09930	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS09935	COG1024	Enoyl-CoA hydratase
CYJ15_RS09940	COG0492	ferredoxin-NADP+ reductase activity
CYJ15_RS09945	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CYJ15_RS09950	COG0095	Lipoate-protein ligase
CYJ15_RS09955	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CYJ15_RS09960	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CYJ15_RS09970	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CYJ15_RS09975	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CYJ15_RS09990	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CYJ15_RS10015	COG4537	Required for transformation and DNA binding
CYJ15_RS10020	COG1459	type II secretion system
CYJ15_RS10025	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CYJ15_RS10040	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CYJ15_RS10050	COG1940	carbohydrate kinase activity
CYJ15_RS10055	COG4483	Protein conserved in bacteria
CYJ15_RS10060	COG0705	Rhomboid family
CYJ15_RS10060	COG0457	Tetratricopeptide repeat
CYJ15_RS10065	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CYJ15_RS10075	COG0768	penicillin binding
CYJ15_RS10080	COG0477	Major facilitator Superfamily
CYJ15_RS10085	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CYJ15_RS10095	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CYJ15_RS10100	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
CYJ15_RS10105	COG0735	belongs to the Fur family
CYJ15_RS10110	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CYJ15_RS10115	COG1121	(ABC) transporter
CYJ15_RS10125	COG3883	PFAM NLP P60 protein
CYJ15_RS10125	COG0791	NLP P60 protein
CYJ15_RS10130	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CYJ15_RS10135	COG0513	Belongs to the DEAD box helicase family
CYJ15_RS10145	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CYJ15_RS10150	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CYJ15_RS10155	COG2384	SAM-dependent methyltransferase
CYJ15_RS10160	COG2010	Cytochrome c
CYJ15_RS10170	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CYJ15_RS10175	COG0358	DNA primase activity
CYJ15_RS10185	COG0517	IMP dehydrogenase activity
CYJ15_RS10195	COG1381	Involved in DNA repair and RecF pathway recombination
CYJ15_RS10210	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CYJ15_RS10215	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CYJ15_RS10220	COG1480	7TM receptor with intracellular HD hydrolase
CYJ15_RS10225	COG1702	phosphate starvation-inducible protein PhoH
CYJ15_RS10240	COG1610	YqeY-like protein
CYJ15_RS10255	COG1283	sodium-dependent phosphate transmembrane transporter activity
CYJ15_RS10260	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CYJ15_RS10265	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CYJ15_RS10270	COG2264	protein methyltransferase activity
CYJ15_RS10280	COG0443	Heat shock 70 kDa protein
CYJ15_RS10285	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CYJ15_RS10295	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CYJ15_RS10300	COG0481	GTPase activity
CYJ15_RS10305	COG0860	N-Acetylmuramoyl-L-alanine amidase
CYJ15_RS10310	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CYJ15_RS10315	COG0268	Binds directly to 16S ribosomal RNA
CYJ15_RS10320	COG1466	dna polymerase III delta subunit
CYJ15_RS10330	COG2333	competence protein COMEC
CYJ15_RS10330	COG0658	competence protein
CYJ15_RS10335	COG2131	deaminase
CYJ15_RS10340	COG1555	photosystem II stabilization
CYJ15_RS10340	COG1596	polysaccharide export
CYJ15_RS10345	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CYJ15_RS10350	COG2226	methyltransferase
CYJ15_RS10355	COG0799	negative regulation of ribosome biogenesis
CYJ15_RS10360	COG1713	HD superfamily hydrolase involved in NAD metabolism
CYJ15_RS10365	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CYJ15_RS10370	COG1534	Rna-binding protein
CYJ15_RS10375	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CYJ15_RS10380	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CYJ15_RS10385	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CYJ15_RS10390	COG0247	lactate metabolic process
CYJ15_RS10395	COG0277	FAD linked oxidase domain protein
CYJ15_RS10400	COG3835	regulator
CYJ15_RS10405	COG2132	Multicopper oxidase
CYJ15_RS10410	COG0071	Belongs to the small heat shock protein (HSP20) family
CYJ15_RS10415	COG2210	Belongs to the sulfur carrier protein TusA family
CYJ15_RS10430	COG0446	pyridine nucleotide-disulphide oxidoreductase
CYJ15_RS10445	COG2132	Multicopper oxidase
CYJ15_RS10450	COG0071	Belongs to the small heat shock protein (HSP20) family
CYJ15_RS10460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CYJ15_RS10470	COG1704	LemA family
CYJ15_RS10480	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CYJ15_RS10500	COG1183	phosphatidylcholine synthase activity
CYJ15_RS10515	COG3634	alkyl hydroperoxide reductase activity
CYJ15_RS10520	COG0450	alkyl hydroperoxide reductase
CYJ15_RS10550	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CYJ15_RS10555	COG0572	uridine kinase
CYJ15_RS10560	COG4122	O-methyltransferase activity
CYJ15_RS10565	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CYJ15_RS10570	COG3906	Belongs to the UPF0473 family
CYJ15_RS10575	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CYJ15_RS10580	COG4472	Bacterial protein of unknown function (DUF965)
CYJ15_RS10585	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CYJ15_RS10590	COG0628	permease
CYJ15_RS10620	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CYJ15_RS10630	COG0482	sulfurtransferase activity
CYJ15_RS10635	COG1104	cysteine desulfurase activity
CYJ15_RS10640	COG1959	2 iron, 2 sulfur cluster binding
CYJ15_RS10655	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS10660	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CYJ15_RS10665	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CYJ15_RS10670	COG0385	Bile acid
CYJ15_RS10680	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CYJ15_RS10685	COG0124	histidyl-tRNA synthetase
CYJ15_RS10690	COG3103	Sh3 type 3 domain protein
CYJ15_RS10690	COG0860	N-Acetylmuramoyl-L-alanine amidase
CYJ15_RS10690	COG4991	sh3 domain protein
CYJ15_RS10695	COG2814	Major facilitator Superfamily
CYJ15_RS10700	COG1566	PFAM secretion protein HlyD family protein
CYJ15_RS10705	COG1846	Transcriptional regulator
CYJ15_RS10710	COG1490	D-aminoacyl-tRNA deacylase activity
CYJ15_RS10715	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CYJ15_RS10720	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CYJ15_RS10725	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CYJ15_RS10725	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CYJ15_RS10730	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CYJ15_RS10730	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CYJ15_RS10740	COG2244	polysaccharide biosynthetic process
CYJ15_RS10745	COG2323	membrane
CYJ15_RS10755	COG1862	Preprotein translocase
CYJ15_RS10760	COG0343	queuine tRNA-ribosyltransferase activity
CYJ15_RS10765	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CYJ15_RS10780	COG0632	four-way junction helicase activity
CYJ15_RS10785	COG0217	transcriptional regulatory protein
CYJ15_RS10795	COG1388	LysM domain
CYJ15_RS10800	COG1827	regulation of RNA biosynthetic process
CYJ15_RS10805	COG0077	Prephenate dehydratase
CYJ15_RS10810	COG4492	Belongs to the UPF0735 family
CYJ15_RS10815	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CYJ15_RS10820	COG3290	protein histidine kinase activity
CYJ15_RS10825	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CYJ15_RS10830	COG2868	ribosomal protein
CYJ15_RS10835	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CYJ15_RS10840	COG1530	ribonuclease E activity
CYJ15_RS10845	COG1994	Peptidase M50
CYJ15_RS10855	COG2894	cell division
CYJ15_RS10860	COG0850	regulation of cytokinetic process
CYJ15_RS10870	COG1792	Involved in formation and maintenance of cell shape
CYJ15_RS10875	COG1077	Cell shape determining protein MreB Mrl
CYJ15_RS10880	COG2003	Belongs to the UPF0758 family
CYJ15_RS10890	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CYJ15_RS10915	COG1459	type II secretion system
CYJ15_RS10925	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CYJ15_RS10960	COG0285	dihydrofolate synthase activity
CYJ15_RS10975	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CYJ15_RS10980	COG1388	LysM domain
CYJ15_RS10980	COG1388	LysM domain
CYJ15_RS10985	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CYJ15_RS10990	COG0113	porphobilinogen synthase activity
CYJ15_RS11005	COG0181	hydroxymethylbilane synthase activity
CYJ15_RS11010	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CYJ15_RS11025	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CYJ15_RS11030	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CYJ15_RS11035	COG1067	ATP-dependent peptidase activity
CYJ15_RS11035	COG0470	DNA polymerase III
CYJ15_RS11045	COG0544	peptidyl-prolyl cis-trans isomerase activity
CYJ15_RS11050	COG0457	Tetratricopeptide repeat
CYJ15_RS11050	COG1477	protein flavinylation
CYJ15_RS11070	COG0622	Phosphoesterase
CYJ15_RS11075	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CYJ15_RS11080	COG5401	PFAM Sporulation and spore germination
CYJ15_RS11090	COG5577	PFAM Coat F domain
CYJ15_RS11095	COG1063	alcohol dehydrogenase
CYJ15_RS11100	COG5577	PFAM Coat F domain
CYJ15_RS11115	COG1846	Transcriptional regulator
CYJ15_RS11145	COG2197	response regulator
CYJ15_RS11150	COG0824	Thioesterase
CYJ15_RS11155	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CYJ15_RS11160	COG1053	succinate dehydrogenase
CYJ15_RS11165	COG2009	succinate dehydrogenase
CYJ15_RS11170	COG1719	4-vinyl reductase, 4VR
CYJ15_RS11180	COG0322	excinuclease ABC activity
CYJ15_RS11185	COG3118	belongs to the thioredoxin family
CYJ15_RS11190	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CYJ15_RS11195	COG2086	electron transfer activity
CYJ15_RS11200	COG1024	Enoyl-CoA hydratase
CYJ15_RS11205	COG1309	transcriptional regulator
CYJ15_RS11210	COG0318	PFAM AMP-dependent synthetase and ligase
CYJ15_RS11215	COG1193	negative regulation of DNA recombination
CYJ15_RS11220	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CYJ15_RS11220	COG1796	DNA polymerase
CYJ15_RS11225	COG1286	toxin biosynthetic process
CYJ15_RS11230	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
CYJ15_RS11240	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CYJ15_RS11240	COG0072	phenylalanine-tRNA ligase activity
CYJ15_RS11245	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CYJ15_RS11250	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CYJ15_RS11290	COG2329	Antibiotic biosynthesis monooxygenase
CYJ15_RS11305	COG1695	Transcriptional regulator
CYJ15_RS11325	COG0431	NADPH-dependent FMN reductase
CYJ15_RS11355	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CYJ15_RS11365	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CYJ15_RS11375	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CYJ15_RS11385	COG1484	DNA-dependent DNA replication
CYJ15_RS11390	COG3611	Membrane attachment protein
CYJ15_RS11395	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CYJ15_RS11400	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CYJ15_RS11405	COG0237	dephospho-CoA kinase activity
CYJ15_RS11410	COG1971	Probably functions as a manganese efflux pump
CYJ15_RS11415	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CYJ15_RS11420	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CYJ15_RS11420	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CYJ15_RS11425	COG0039	L-malate dehydrogenase activity
CYJ15_RS11430	COG0538	isocitrate dehydrogenase activity
CYJ15_RS11435	COG0372	Belongs to the citrate synthase family
CYJ15_RS11440	COG2707	UPF0756 membrane protein
CYJ15_RS11445	COG0628	permease
CYJ15_RS11455	COG0205	6-phosphofructokinase activity
CYJ15_RS11460	COG0825	malonyl-CoA metabolic process
CYJ15_RS11465	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CYJ15_RS11470	COG0281	malic enzyme
CYJ15_RS11475	COG0587	DNA-directed DNA polymerase activity
CYJ15_RS11490	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CYJ15_RS11500	COG4109	DRTGG domain
CYJ15_RS11505	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CYJ15_RS11510	COG0006	proline dipeptidase activity
CYJ15_RS11520	COG0589	response to stress
CYJ15_RS11530	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CYJ15_RS11535	COG0827	DNA restriction-modification system
CYJ15_RS11540	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CYJ15_RS11545	COG3874	Sporulation protein YtfJ
CYJ15_RS11555	COG1714	RDD family
CYJ15_RS11560	COG0616	signal peptide processing
CYJ15_RS11565	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CYJ15_RS11575	COG0301	tRNA thio-modification
CYJ15_RS11580	COG1104	cysteine desulfurase activity
CYJ15_RS11585	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CYJ15_RS11590	COG1309	transcriptional regulator
CYJ15_RS11595	COG1956	GAF domain-containing protein
CYJ15_RS11600	COG2203	Gaf domain
CYJ15_RS11600	COG2199	diguanylate cyclase activity
CYJ15_RS11605	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CYJ15_RS11615	COG0506	proline dehydrogenase activity
CYJ15_RS11620	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS11625	COG3290	protein histidine kinase activity
CYJ15_RS11625	COG3829	transcription factor binding
CYJ15_RS11635	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CYJ15_RS11640	COG3383	formate dehydrogenase (NAD+) activity
CYJ15_RS11645	COG2427	Protein of unknown function (DUF1641)
CYJ15_RS11650	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CYJ15_RS11655	COG0315	cyclic pyranopterin monophosphate synthase activity
CYJ15_RS11660	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CYJ15_RS11665	COG0314	molybdopterin synthase activity
CYJ15_RS11670	COG1763	Mo-molybdopterin cofactor biosynthetic process
CYJ15_RS11675	COG0303	'Molybdopterin
CYJ15_RS11690	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CYJ15_RS11695	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CYJ15_RS11700	COG4149	molybdate abc transporter
CYJ15_RS11710	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CYJ15_RS11715	COG0454	-acetyltransferase
CYJ15_RS11720	COG0517	IMP dehydrogenase activity
CYJ15_RS11725	COG0123	including yeast histone deacetylase and acetoin utilization protein
CYJ15_RS11735	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CYJ15_RS11735	COG1605	Chorismate mutase
CYJ15_RS11740	COG4980	gas vesicle protein
CYJ15_RS11750	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CYJ15_RS11755	COG1674	ftsk spoiiie
CYJ15_RS11765	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CYJ15_RS11770	COG4848	Belongs to the UPF0354 family
CYJ15_RS11775	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CYJ15_RS11780	COG2208	phosphoserine phosphatase activity
CYJ15_RS11785	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CYJ15_RS11795	COG5002	protein histidine kinase activity
CYJ15_RS11795	COG0784	Response regulator, receiver
CYJ15_RS11830	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CYJ15_RS11835	COG1363	Peptidase, m42
CYJ15_RS11840	COG5584	Small secreted protein
CYJ15_RS11845	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CYJ15_RS11850	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CYJ15_RS11860	COG0510	thiamine kinase activity
CYJ15_RS11885	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CYJ15_RS11900	COG1349	DNA-binding transcription factor activity
CYJ15_RS11905	COG2244	polysaccharide biosynthetic process
CYJ15_RS11925	COG0495	leucyl-tRNA aminoacylation
CYJ15_RS11930	COG2814	Major facilitator Superfamily
CYJ15_RS11945	COG0275	rRNA processing
CYJ15_RS11960	COG2267	carboxylic ester hydrolase activity
CYJ15_RS11965	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CYJ15_RS11970	COG0367	asparagine synthase
CYJ15_RS11975	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CYJ15_RS11980	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
CYJ15_RS11990	COG1506	peptidase
CYJ15_RS11995	COG0655	NAD(P)H dehydrogenase (quinone) activity
CYJ15_RS12005	COG1070	Carbohydrate kinase
CYJ15_RS12015	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CYJ15_RS12020	COG1116	anion transmembrane transporter activity
CYJ15_RS12025	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CYJ15_RS12040	COG0783	Belongs to the Dps family
CYJ15_RS12045	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CYJ15_RS12055	COG0803	Belongs to the bacterial solute-binding protein 9 family
CYJ15_RS12065	COG4948	Mandelate Racemase Muconate Lactonizing
CYJ15_RS12070	COG0318	PFAM AMP-dependent synthetase and ligase
CYJ15_RS12075	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CYJ15_RS12080	COG0596	Alpha beta hydrolase
CYJ15_RS12085	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
CYJ15_RS12090	COG1169	isochorismate synthase
CYJ15_RS12095	COG1575	Belongs to the MenA family. Type 1 subfamily
CYJ15_RS12225	COG1136	(ABC) transporter
CYJ15_RS12225	COG0577	efflux transmembrane transporter activity
CYJ15_RS12265	COG1285	pathogenesis
CYJ15_RS12285	COG2217	Heavy metal translocating P-type atpase
CYJ15_RS12290	COG2608	mercury ion transmembrane transporter activity
CYJ15_RS12315	COG1937	Protein conserved in bacteria
CYJ15_RS12320	COG1522	sequence-specific DNA binding
CYJ15_RS12345	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CYJ15_RS12370	COG5002	protein histidine kinase activity
CYJ15_RS12375	COG0745	RESPONSE REGULATOR receiver
CYJ15_RS12380	COG1388	LysM domain
CYJ15_RS12385	COG4221	oxidoreductase activity
CYJ15_RS12395	COG0726	polysaccharide deacetylase
CYJ15_RS12410	COG0038	chloride channel
CYJ15_RS12420	COG0425	Belongs to the sulfur carrier protein TusA family
CYJ15_RS12420	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CYJ15_RS12425	COG1937	Protein conserved in bacteria
CYJ15_RS12430	COG1525	nuclease
CYJ15_RS12435	COG2190	(PTS) system
CYJ15_RS12460	COG0235	Class ii aldolase
CYJ15_RS12465	COG2160	L-arabinose isomerase activity
CYJ15_RS12470	COG1609	Transcriptional regulator
CYJ15_RS12475	COG4213	ABC transporter substrate-binding protein
CYJ15_RS12485	COG4214	carbohydrate transport
CYJ15_RS12490	COG2160	L-arabinose isomerase activity
CYJ15_RS12500	COG1609	Transcriptional regulator
CYJ15_RS12505	COG0840	transmembrane signaling receptor activity
CYJ15_RS12520	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS12525	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CYJ15_RS12540	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS12560	COG2333	competence protein COMEC
CYJ15_RS12560	COG0658	competence protein
CYJ15_RS12615	COG0584	glycerophosphoryl diester phosphodiesterase
CYJ15_RS12720	COG5484	DNA packaging
CYJ15_RS12750	COG0175	sulfate reduction
CYJ15_RS12825	COG3723	Recombinational DNA repair protein, rece pathway
CYJ15_RS12830	COG5377	YqaJ viral recombinase family
CYJ15_RS12865	COG3617	BRO family, N-terminal domain
CYJ15_RS12890	COG1525	nuclease
CYJ15_RS12905	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CYJ15_RS12915	COG2155	Conserved Protein
CYJ15_RS12930	COG1098	S1 RNA binding domain
CYJ15_RS12950	COG0656	L-ascorbic acid biosynthetic process
CYJ15_RS12970	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CYJ15_RS13000	COG2814	Major facilitator Superfamily
CYJ15_RS13005	COG2050	protein possibly involved in aromatic compounds catabolism
CYJ15_RS13020	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CYJ15_RS13030	COG0697	spore germination
CYJ15_RS13040	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CYJ15_RS13045	COG3584	3D domain protein
CYJ15_RS13055	COG1252	NADH dehydrogenase
CYJ15_RS13070	COG0492	ferredoxin-NADP+ reductase activity
CYJ15_RS13095	COG0316	Belongs to the HesB IscA family
CYJ15_RS13100	COG4837	Protein of unknown function (DUF1462)
CYJ15_RS13105	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CYJ15_RS13110	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CYJ15_RS13115	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CYJ15_RS13120	COG0647	UMP catabolic process
CYJ15_RS13125	COG2445	Protein of unknown function DUF86
CYJ15_RS13130	COG4470	Protein conserved in bacteria
CYJ15_RS13135	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CYJ15_RS13140	COG0739	heme binding
CYJ15_RS13150	COG3377	Domain of unknown function (DUF1805)
CYJ15_RS13155	COG0737	Belongs to the 5'-nucleotidase family
CYJ15_RS13160	COG0719	Fe-S assembly protein
CYJ15_RS13165	COG0822	iron-sulfur transferase activity
CYJ15_RS13170	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CYJ15_RS13175	COG0719	Fe-S assembly protein
CYJ15_RS13180	COG0396	ATPase activity
CYJ15_RS13195	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CYJ15_RS13200	COG0509	glycine decarboxylation via glycine cleavage system
CYJ15_RS13205	COG1393	Belongs to the ArsC family
CYJ15_RS13210	COG1960	acyl-CoA dehydrogenase activity
CYJ15_RS13215	COG0183	Belongs to the thiolase family
CYJ15_RS13220	COG1250	3-hydroxyacyl-CoA dehydrogenase
CYJ15_RS13220	COG1024	Enoyl-CoA hydratase
CYJ15_RS13235	COG5577	PFAM Coat F domain
CYJ15_RS13240	COG0772	Belongs to the SEDS family
CYJ15_RS13245	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CYJ15_RS13260	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CYJ15_RS13275	COG2199	diguanylate cyclase activity
CYJ15_RS13275	COG2200	EAL domain
CYJ15_RS13275	COG2202	Pas domain
CYJ15_RS13280	COG0753	catalase activity
CYJ15_RS13285	COG0671	phosphoesterase, PA-phosphatase related
CYJ15_RS13295	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CYJ15_RS13315	COG1595	DNA-templated transcription, initiation
CYJ15_RS13320	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CYJ15_RS13335	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CYJ15_RS13350	COG2610	gluconate transmembrane transporter activity
CYJ15_RS13355	COG1312	Catalyzes the dehydration of D-mannonate
CYJ15_RS13360	COG0246	Mannitol dehydrogenase
CYJ15_RS13365	COG2721	sulfolactate sulfo-lyase activity
CYJ15_RS13370	COG0246	Mannitol dehydrogenase
CYJ15_RS13380	COG0800	Aldolase
CYJ15_RS13385	COG1414	Transcriptional regulator
CYJ15_RS13455	COG0557	exoribonuclease II activity
CYJ15_RS13460	COG1647	Serine aminopeptidase, S33
CYJ15_RS13465	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CYJ15_RS13470	COG0148	phosphopyruvate hydratase activity
CYJ15_RS13475	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CYJ15_RS13485	COG0126	phosphoglycerate kinase activity
CYJ15_RS13505	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CYJ15_RS13520	COG3383	formate dehydrogenase (NAD+) activity
CYJ15_RS13530	COG0840	transmembrane signaling receptor activity
CYJ15_RS13560	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CYJ15_RS13575	COG4608	Belongs to the ABC transporter superfamily
CYJ15_RS13580	COG0791	NLP P60 protein
CYJ15_RS13585	COG4166	transmembrane transport
CYJ15_RS13590	COG0444	Belongs to the ABC transporter superfamily
CYJ15_RS13595	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CYJ15_RS13600	COG0601	transmembrane transport
CYJ15_RS13605	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CYJ15_RS13615	COG0598	Magnesium transport protein CorA
CYJ15_RS13630	COG2719	SpoVR family
CYJ15_RS13635	COG3594	Acyltransferase
CYJ15_RS13660	COG1392	Phosphate transport regulator
CYJ15_RS13665	COG0306	phosphate transporter
CYJ15_RS13680	COG2718	Belongs to the UPF0229 family
CYJ15_RS13685	COG2766	serine protein kinase
CYJ15_RS13700	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CYJ15_RS13715	COG2095	MarC family integral membrane protein
CYJ15_RS13730	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CYJ15_RS13735	COG0596	Alpha beta hydrolase
CYJ15_RS13740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CYJ15_RS13745	COG0765	amino acid transport
CYJ15_RS13750	COG1126	abc transporter atp-binding protein
CYJ15_RS13755	COG2116	formate transmembrane transporter activity
CYJ15_RS13780	COG1882	Formate acetyltransferase
CYJ15_RS13785	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CYJ15_RS13790	COG0431	NADPH-dependent FMN reductase
CYJ15_RS13805	COG1131	(ABC) transporter
CYJ15_RS13835	COG0745	RESPONSE REGULATOR receiver
CYJ15_RS13840	COG5002	protein histidine kinase activity
CYJ15_RS13840	COG3850	Histidine kinase
CYJ15_RS13850	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CYJ15_RS13860	COG1131	(ABC) transporter
CYJ15_RS13865	COG4555	ABC transporter
CYJ15_RS13875	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CYJ15_RS13880	COG1846	Transcriptional regulator
CYJ15_RS13900	COG0577	efflux transmembrane transporter activity
CYJ15_RS13900	COG1136	(ABC) transporter
CYJ15_RS13920	COG2271	Major facilitator Superfamily
CYJ15_RS13925	COG0697	spore germination
CYJ15_RS13945	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CYJ15_RS13950	COG2323	membrane
CYJ15_RS14055	COG3527	Alpha-acetolactate decarboxylase
CYJ15_RS14060	COG0028	Belongs to the TPP enzyme family
CYJ15_RS14065	COG0583	DNA-binding transcription factor activity
CYJ15_RS14070	COG0735	belongs to the Fur family
CYJ15_RS14085	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CYJ15_RS14090	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CYJ15_RS14095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CYJ15_RS14100	COG1116	anion transmembrane transporter activity
CYJ15_RS14105	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CYJ15_RS14110	COG2814	Major facilitator Superfamily
CYJ15_RS14140	COG1737	Transcriptional regulator
CYJ15_RS14145	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CYJ15_RS14145	COG1263	PTS System
CYJ15_RS14150	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CYJ15_RS14160	COG1132	(ABC) transporter
CYJ15_RS14165	COG3557	Belongs to the UPF0374 family
CYJ15_RS14180	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS14185	COG0583	DNA-binding transcription factor activity
CYJ15_RS14190	COG0070	glutamate synthase
CYJ15_RS14190	COG0069	glutamate synthase activity
CYJ15_RS14190	COG0067	glutamate synthase
CYJ15_RS14195	COG0493	'glutamate synthase
CYJ15_RS14220	COG1988	membrane-bound metal-dependent
CYJ15_RS14225	COG1194	a g-specific adenine glycosylase
CYJ15_RS14255	COG0159	tryptophan synthase activity
CYJ15_RS14265	COG0133	tryptophan synthase activity
CYJ15_RS14270	COG0134	indole-3-glycerol-phosphate synthase activity
CYJ15_RS14275	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CYJ15_RS14280	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CYJ15_RS14280	COG0512	Glutamine amidotransferase of anthranilate synthase
CYJ15_RS14290	COG0577	efflux transmembrane transporter activity
CYJ15_RS14295	COG1136	(ABC) transporter
CYJ15_RS14295	COG0577	efflux transmembrane transporter activity
CYJ15_RS14300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CYJ15_RS14320	COG1131	(ABC) transporter
CYJ15_RS14360	COG2197	response regulator
CYJ15_RS14365	COG4585	Histidine kinase
CYJ15_RS14375	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS14375	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS14385	COG0058	SHG alpha-glucan phosphorylase activity
CYJ15_RS14390	COG0840	transmembrane signaling receptor activity
CYJ15_RS14395	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CYJ15_RS14400	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CYJ15_RS14405	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CYJ15_RS14420	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CYJ15_RS14425	COG0066	3-isopropylmalate dehydratase activity
CYJ15_RS14430	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CYJ15_RS14440	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CYJ15_RS14445	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CYJ15_RS14450	COG0440	acetolactate synthase activity
CYJ15_RS14455	COG0028	Belongs to the TPP enzyme family
CYJ15_RS14460	COG0129	dihydroxy-acid dehydratase activity
CYJ15_RS14470	COG1114	Component of the transport system for branched-chain amino acids
CYJ15_RS14475	COG1366	Belongs to the anti-sigma-factor antagonist family
CYJ15_RS14485	COG2124	cytochrome p450
CYJ15_RS14490	COG0670	Belongs to the BI1 family
CYJ15_RS14500	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CYJ15_RS14505	COG2223	nitrite transmembrane transporter activity
CYJ15_RS14510	COG3279	Response regulator of the LytR AlgR family
CYJ15_RS14515	COG3275	phosphorelay sensor kinase activity
CYJ15_RS14520	COG0252	asparaginase activity
CYJ15_RS14525	COG2132	Multicopper oxidase
CYJ15_RS14530	COG1309	transcriptional regulator
CYJ15_RS14535	COG1511	domain protein
CYJ15_RS14565	COG5278	phosphoserine phosphatase activity
CYJ15_RS14565	COG0840	transmembrane signaling receptor activity
CYJ15_RS14570	COG3739	integral membrane protein
CYJ15_RS14575	COG3655	Transcriptional regulator
CYJ15_RS14590	COG1823	symporter activity
CYJ15_RS14595	COG2839	Protein conserved in bacteria
CYJ15_RS14615	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
CYJ15_RS14620	COG0477	Major facilitator Superfamily
CYJ15_RS14630	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CYJ15_RS14635	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CYJ15_RS14640	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CYJ15_RS14645	COG0840	transmembrane signaling receptor activity
CYJ15_RS14665	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CYJ15_RS14670	COG1132	(ABC) transporter
CYJ15_RS14675	COG1846	Transcriptional regulator
CYJ15_RS14685	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CYJ15_RS14690	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CYJ15_RS14715	COG0387	Pfam Sodium calcium exchanger
CYJ15_RS14720	COG0477	Major facilitator Superfamily
CYJ15_RS14725	COG1295	ribonuclease BN
CYJ15_RS14730	COG4840	Belongs to the UPF0435 family
CYJ15_RS14735	COG0024	Methionine aminopeptidase
CYJ15_RS14740	COG0693	protein deglycase activity
CYJ15_RS14745	COG1360	Flagellar Motor Protein
CYJ15_RS14750	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CYJ15_RS14760	COG3189	MarR family transcriptional regulator
CYJ15_RS14770	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CYJ15_RS14775	COG1607	acyl-coa hydrolase
CYJ15_RS14780	COG1077	Cell shape determining protein MreB Mrl
CYJ15_RS14785	COG2268	Band 7 protein
CYJ15_RS14790	COG1585	Membrane protein implicated in regulation of membrane protease activity
CYJ15_RS14795	COG0626	cystathionine gamma-synthase activity
CYJ15_RS14800	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CYJ15_RS14805	COG1854	S-ribosylhomocysteine lyase activity
CYJ15_RS14810	COG2226	methyltransferase
CYJ15_RS14815	COG0288	reversible hydration of carbon dioxide
CYJ15_RS14820	COG0860	N-Acetylmuramoyl-L-alanine amidase
CYJ15_RS14830	COG2197	response regulator
CYJ15_RS14850	COG4086	secreted protein
CYJ15_RS14855	COG0737	Belongs to the 5'-nucleotidase family
CYJ15_RS14870	COG3620	sequence-specific DNA binding
CYJ15_RS14885	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CYJ15_RS14890	COG1518	maintenance of DNA repeat elements
CYJ15_RS14925	COG0778	Nitroreductase
CYJ15_RS14935	COG1304	FMN binding
CYJ15_RS14940	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CYJ15_RS14945	COG0166	Belongs to the GPI family
CYJ15_RS14950	COG0025	NhaP-type Na H and K H
CYJ15_RS14955	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CYJ15_RS14955	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CYJ15_RS14955	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CYJ15_RS14960	COG1349	DNA-binding transcription factor activity
CYJ15_RS14965	COG0371	Dehydrogenase
CYJ15_RS14990	COG0561	phosphatase activity
CYJ15_RS15005	COG2814	Major facilitator Superfamily
CYJ15_RS15010	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CYJ15_RS15025	COG2357	RelA SpoT domain protein
CYJ15_RS15030	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CYJ15_RS15035	COG0667	Aldo Keto reductase
CYJ15_RS15045	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
CYJ15_RS15050	COG1461	Dihydroxyacetone kinase
CYJ15_RS15055	COG2376	Dihydroxyacetone kinase
CYJ15_RS15125	COG0778	Nitroreductase
CYJ15_RS15130	COG1113	amino acid transport
CYJ15_RS15135	COG0730	response to heat
CYJ15_RS15140	COG2233	PERMEase
CYJ15_RS15145	COG0210	DNA helicase
CYJ15_RS15150	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CYJ15_RS15175	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CYJ15_RS15180	COG1024	Enoyl-CoA hydratase
CYJ15_RS15190	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CYJ15_RS15195	COG0511	ligase activity, forming carbon-carbon bonds
CYJ15_RS15200	COG0439	Biotin carboxylase
CYJ15_RS15205	COG1960	acyl-CoA dehydrogenase activity
CYJ15_RS15210	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CYJ15_RS15225	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CYJ15_RS15230	COG3829	transcription factor binding
CYJ15_RS15255	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
CYJ15_RS15260	COG0833	amino acid
CYJ15_RS15265	COG1309	transcriptional regulator
CYJ15_RS15295	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CYJ15_RS15300	COG1140	nitrate reductase beta subunit
CYJ15_RS15310	COG2181	nitrate reductase activity
CYJ15_RS15315	COG2223	nitrite transmembrane transporter activity
CYJ15_RS15320	COG3588	fructose-bisphosphate aldolase
CYJ15_RS15360	COG4268	DNA restriction-modification system
CYJ15_RS15365	COG1401	restriction endodeoxyribonuclease activity
CYJ15_RS15370	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CYJ15_RS15420	COG0583	DNA-binding transcription factor activity
CYJ15_RS15425	COG0431	NADPH-dependent FMN reductase
CYJ15_RS15430	COG0454	-acetyltransferase
CYJ15_RS15435	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CYJ15_RS15440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CYJ15_RS15445	COG0765	amino acid transport
CYJ15_RS15450	COG0765	amino acid transport
CYJ15_RS15455	COG1126	abc transporter atp-binding protein
CYJ15_RS15460	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CYJ15_RS15465	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CYJ15_RS15470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CYJ15_RS15475	COG1280	lysine exporter protein (LysE YggA)
CYJ15_RS15480	COG0386	Belongs to the glutathione peroxidase family
CYJ15_RS15485	COG2190	(PTS) system
CYJ15_RS15495	COG1263	PTS System
CYJ15_RS15495	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CYJ15_RS15500	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CYJ15_RS15500	COG0517	IMP dehydrogenase activity
CYJ15_RS15510	COG0281	malic enzyme
CYJ15_RS15530	COG1301	dicarboxylic acid transport
CYJ15_RS15540	COG1328	CTP reductase activity
CYJ15_RS15550	COG1063	alcohol dehydrogenase
CYJ15_RS15560	COG1929	Belongs to the glycerate kinase type-1 family
CYJ15_RS15565	COG2610	gluconate transmembrane transporter activity
CYJ15_RS15570	COG1879	ABC-type sugar transport system periplasmic component
CYJ15_RS15575	COG1172	Belongs to the binding-protein-dependent transport system permease family
CYJ15_RS15580	COG1129	ABC transporter
CYJ15_RS15585	COG1869	D-ribose catabolic process
CYJ15_RS15590	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CYJ15_RS15595	COG1609	Transcriptional regulator
CYJ15_RS15635	COG4549	nuclear export factor GLE1
CYJ15_RS15640	COG2372	response to copper ion
CYJ15_RS15640	COG1276	copper resistance
CYJ15_RS15650	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CYJ15_RS15655	COG1609	Transcriptional regulator
CYJ15_RS15670	COG5002	protein histidine kinase activity
CYJ15_RS15675	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CYJ15_RS15680	COG1278	Cold shock
CYJ15_RS15685	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CYJ15_RS15690	COG0697	spore germination
CYJ15_RS15705	COG0697	spore germination
CYJ15_RS15710	COG1472	Belongs to the glycosyl hydrolase 3 family
CYJ15_RS15735	COG1132	(ABC) transporter
CYJ15_RS15740	COG1132	(ABC) transporter
CYJ15_RS15760	COG0791	NLP P60 protein
CYJ15_RS15760	COG1388	LysM domain
CYJ15_RS15780	COG2272	Belongs to the type-B carboxylesterase lipase family
CYJ15_RS15785	COG0154	amidase activity
CYJ15_RS15790	COG2814	Major facilitator Superfamily
CYJ15_RS15795	COG1012	belongs to the aldehyde dehydrogenase family
CYJ15_RS15835	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CYJ15_RS15835	COG3153	acetyltransferase
CYJ15_RS15840	COG5583	Uncharacterized small protein (DUF2292)
CYJ15_RS15845	COG0431	NADPH-dependent FMN reductase
CYJ15_RS15850	COG1116	anion transmembrane transporter activity
CYJ15_RS15855	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CYJ15_RS15860	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CYJ15_RS15865	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CYJ15_RS15890	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CYJ15_RS15905	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CYJ15_RS15915	COG2390	Transcriptional regulator
CYJ15_RS15925	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CYJ15_RS15935	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CYJ15_RS15950	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CYJ15_RS15955	COG1984	allophanate hydrolase subunit 2
CYJ15_RS15960	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CYJ15_RS15965	COG2814	Major facilitator Superfamily
CYJ15_RS15970	COG1764	response to oxidative stress
CYJ15_RS15975	COG1126	abc transporter atp-binding protein
CYJ15_RS15980	COG0765	amino acid transport
CYJ15_RS15985	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CYJ15_RS15995	COG0326	Molecular chaperone. Has ATPase activity
CYJ15_RS16055	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CYJ15_RS16070	COG1064	alcohol dehydrogenase
CYJ15_RS16100	COG2814	Major facilitator Superfamily
CYJ15_RS16105	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS16165	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CYJ15_RS16170	COG1597	lipid kinase activity
CYJ15_RS16195	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CYJ15_RS16200	COG0154	amidase activity
CYJ15_RS16205	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CYJ15_RS16210	COG2224	Isocitrate lyase
CYJ15_RS16215	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CYJ15_RS16220	COG4851	CamS sex pheromone cAM373 precursor
CYJ15_RS16230	COG0210	DNA helicase
CYJ15_RS16235	COG0210	DNA helicase
CYJ15_RS16240	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
CYJ15_RS16245	COG4496	protein, YerC YecD
CYJ15_RS16250	COG1470	cell adhesion involved in biofilm formation
CYJ15_RS16265	COG0151	Belongs to the GarS family
CYJ15_RS16270	COG0138	bifunctional purine biosynthesis protein purh
CYJ15_RS16275	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CYJ15_RS16280	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CYJ15_RS16285	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CYJ15_RS16290	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CYJ15_RS16295	COG0047	phosphoribosylformylglycinamidine synthase activity
CYJ15_RS16300	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CYJ15_RS16310	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CYJ15_RS16315	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CYJ15_RS16320	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CYJ15_RS16330	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
CYJ15_RS16335	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CYJ15_RS16340	COG1263	PTS System
CYJ15_RS16340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CYJ15_RS16340	COG2190	(PTS) system
CYJ15_RS16355	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CYJ15_RS16355	COG1263	PTS System
CYJ15_RS16380	COG1301	dicarboxylic acid transport
CYJ15_RS16390	COG3711	transcriptional antiterminator
CYJ15_RS16395	COG2252	PERMEase
CYJ15_RS16405	COG1132	(ABC) transporter
CYJ15_RS16410	COG2814	Major facilitator Superfamily
CYJ15_RS16415	COG2197	response regulator
CYJ15_RS16420	COG3850	Histidine kinase
CYJ15_RS16425	COG1131	(ABC) transporter
CYJ15_RS16435	COG0842	Transport permease protein
CYJ15_RS16470	COG0824	Thioesterase
CYJ15_RS16475	COG0318	PFAM AMP-dependent synthetase and ligase
CYJ15_RS16480	COG0183	Belongs to the thiolase family
CYJ15_RS16485	COG1024	Enoyl-CoA hydratase
CYJ15_RS16490	COG1250	3-hydroxyacyl-CoA dehydrogenase
CYJ15_RS16500	COG2814	Major facilitator Superfamily
CYJ15_RS16510	COG0179	Fumarylacetoacetate (FAA) hydrolase
CYJ15_RS16520	COG0471	metal ion transport
CYJ15_RS16545	COG1131	(ABC) transporter
CYJ15_RS16550	COG1725	Transcriptional regulator
CYJ15_RS16555	COG1695	Transcriptional regulator
CYJ15_RS16560	COG3479	Phenolic acid decarboxylase
CYJ15_RS16565	COG2910	NAD(P)H-binding
CYJ15_RS16570	COG1959	2 iron, 2 sulfur cluster binding
CYJ15_RS16605	COG0425	Belongs to the sulfur carrier protein TusA family
CYJ15_RS16610	COG2391	methyltransferase activity
CYJ15_RS16620	COG1028	Short-chain dehydrogenase reductase Sdr
CYJ15_RS16640	COG1120	ATPase activity
CYJ15_RS16645	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CYJ15_RS16680	COG3620	sequence-specific DNA binding
CYJ15_RS16695	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CYJ15_RS16695	COG0519	Catalyzes the synthesis of GMP from XMP
CYJ15_RS16700	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CYJ15_RS16705	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CYJ15_RS16710	COG1335	isochorismatase
CYJ15_RS16715	COG4948	Mandelate Racemase Muconate Lactonizing
CYJ15_RS16725	COG0463	Glycosyl transferase, family 2
CYJ15_RS16730	COG2246	polysaccharide biosynthetic process
CYJ15_RS16735	COG0459	protein refolding
CYJ15_RS16740	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CYJ15_RS16745	COG1266	CAAX protease self-immunity
CYJ15_RS16755	COG0805	protein transport
CYJ15_RS16760	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CYJ15_RS16765	COG0488	(ABC) transporter
CYJ15_RS16780	COG0456	acetyltransferase
CYJ15_RS16785	COG1214	PFAM Peptidase M22, glycoprotease
CYJ15_RS16790	COG0802	atpase or kinase
CYJ15_RS16875	COG3091	SprT-like family
CYJ15_RS16885	COG2183	response to ionizing radiation
CYJ15_RS16890	COG2208	phosphoserine phosphatase activity
CYJ15_RS16895	COG1191	sigma factor activity
CYJ15_RS16900	COG2172	sigma factor antagonist activity
CYJ15_RS16905	COG1366	Belongs to the anti-sigma-factor antagonist family
CYJ15_RS16910	COG2208	phosphoserine phosphatase activity
CYJ15_RS16915	COG2172	sigma factor antagonist activity
CYJ15_RS16920	COG1366	Belongs to the anti-sigma-factor antagonist family
CYJ15_RS16925	COG1366	Belongs to the anti-sigma-factor antagonist family
CYJ15_RS16935	COG2337	Toxic component of a toxin-antitoxin (TA) module
CYJ15_RS16940	COG0864	Transcriptional regulator
CYJ15_RS16950	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CYJ15_RS16955	COG0736	holo-[acyl-carrier-protein] synthase activity
CYJ15_RS16960	COG0705	Rhomboid family
CYJ15_RS16965	COG0513	Belongs to the DEAD box helicase family
CYJ15_RS16970	COG0531	amino acid
CYJ15_RS16995	COG1280	lysine exporter protein (LysE YggA)
CYJ15_RS17005	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CYJ15_RS17010	COG1609	Transcriptional regulator
CYJ15_RS17015	COG0366	Alpha amylase catalytic
CYJ15_RS17025	COG2182	Extracellular solute-binding protein
CYJ15_RS17030	COG1175	transmembrane transport
CYJ15_RS17035	COG3833	ABC-type maltose transport systems, permease component
CYJ15_RS17045	COG1554	hydrolase, family 65, central catalytic
CYJ15_RS17055	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CYJ15_RS17060	COG1181	Belongs to the D-alanine--D-alanine ligase family
CYJ15_RS17075	COG1253	flavin adenine dinucleotide binding
CYJ15_RS17080	COG0789	Transcriptional regulator
CYJ15_RS17085	COG1253	flavin adenine dinucleotide binding
CYJ15_RS17100	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CYJ15_RS17115	COG0629	single-stranded DNA binding
CYJ15_RS17120	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CYJ15_RS17125	COG4786	Flagellar basal body rod
CYJ15_RS17130	COG4786	Flagellar basal body rod
CYJ15_RS17135	COG1077	Cell shape determining protein MreB Mrl
CYJ15_RS17140	COG1609	Transcriptional regulator
CYJ15_RS17145	COG0739	heme binding
CYJ15_RS17150	COG2385	sporulation resulting in formation of a cellular spore
CYJ15_RS17160	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CYJ15_RS17170	COG4836	Membrane
CYJ15_RS17175	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CYJ15_RS17180	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CYJ15_RS17185	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CYJ15_RS17190	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CYJ15_RS17195	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CYJ15_RS17205	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CYJ15_RS17210	COG0356	it plays a direct role in the translocation of protons across the membrane
CYJ15_RS17220	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CYJ15_RS17230	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CYJ15_RS17240	COG0698	ribose 5-phosphate isomerase
CYJ15_RS17260	COG1971	Probably functions as a manganese efflux pump
CYJ15_RS17265	COG0009	L-threonylcarbamoyladenylate synthase
CYJ15_RS17280	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CYJ15_RS17290	COG1435	thymidine kinase activity
CYJ15_RS17295	COG0254	rRNA binding
CYJ15_RS17300	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CYJ15_RS17305	COG1494	fructose-1,6-bisphosphatase
CYJ15_RS17310	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CYJ15_RS17315	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CYJ15_RS17320	COG0191	fructose-bisphosphate aldolase activity
CYJ15_RS17325	COG2204	response regulator
CYJ15_RS17340	COG1131	(ABC) transporter
CYJ15_RS17345	COG1725	Transcriptional regulator
CYJ15_RS17350	COG0504	CTP synthase activity
CYJ15_RS17355	COG3343	RNA polymerase activity
CYJ15_RS17365	COG1136	(ABC) transporter
CYJ15_RS17380	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CYJ15_RS17380	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CYJ15_RS17380	COG1703	isobutyryl-CoA mutase activity
CYJ15_RS17385	COG1309	transcriptional regulator
CYJ15_RS17390	COG1960	acyl-CoA dehydrogenase activity
CYJ15_RS17395	COG1960	acyl-CoA dehydrogenase activity
CYJ15_RS17400	COG0183	Belongs to the thiolase family
CYJ15_RS17405	COG2181	nitrate reductase activity
CYJ15_RS17405	COG0247	lactate metabolic process
CYJ15_RS17410	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CYJ15_RS17415	COG0018	arginyl-trna synthetase
CYJ15_RS17425	COG0010	Belongs to the arginase family
CYJ15_RS17430	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CYJ15_RS17440	COG1994	Peptidase M50
CYJ15_RS17450	COG3465	dGTPase activity
CYJ15_RS17455	COG1078	dGTPase activity
CYJ15_RS17470	COG0095	Lipoate-protein ligase
CYJ15_RS17475	COG0280	phosphate acetyltransferase
CYJ15_RS17480	COG3253	May function as heme-dependent peroxidase
CYJ15_RS17490	COG2363	Small membrane protein
CYJ15_RS17500	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CYJ15_RS17540	COG4555	ABC transporter
CYJ15_RS17560	COG1122	ATPase activity
CYJ15_RS17580	COG0351	phosphomethylpyrimidine kinase
CYJ15_RS17590	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CYJ15_RS17595	COG0561	phosphatase activity
CYJ15_RS17600	COG0514	ATP-dependent DNA helicase (RecQ)
CYJ15_RS17605	COG1785	Belongs to the alkaline phosphatase family
CYJ15_RS17610	COG1737	Transcriptional regulator
CYJ15_RS17620	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CYJ15_RS17625	COG1346	cytolysis
CYJ15_RS17630	COG1380	Effector of murein hydrolase LrgA
CYJ15_RS17635	COG0583	DNA-binding transcription factor activity
CYJ15_RS17640	COG0367	asparagine synthase
CYJ15_RS17665	COG2966	Psort location CytoplasmicMembrane, score
CYJ15_RS17670	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CYJ15_RS17675	COG1966	Carbon starvation protein
CYJ15_RS17685	COG3275	phosphorelay sensor kinase activity
CYJ15_RS17690	COG1464	Belongs to the NlpA lipoprotein family
CYJ15_RS17695	COG2011	ABC-type metal ion transport system permease component
CYJ15_RS17700	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CYJ15_RS17705	COG1119	ATPase activity
CYJ15_RS17720	COG0534	Mate efflux family protein
CYJ15_RS17725	COG1442	glycosyl transferase family 8
CYJ15_RS17730	COG2195	Cleaves the N-terminal amino acid of tripeptides
CYJ15_RS17740	COG2814	Major facilitator Superfamily
CYJ15_RS17755	COG0028	Belongs to the TPP enzyme family
CYJ15_RS17760	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CYJ15_RS17765	COG1132	(ABC) transporter
CYJ15_RS17775	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CYJ15_RS17795	COG2188	Transcriptional regulator
CYJ15_RS17800	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
CYJ15_RS17805	COG1366	Belongs to the anti-sigma-factor antagonist family
CYJ15_RS17810	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CYJ15_RS17815	COG0765	amino acid transport
CYJ15_RS17820	COG1126	abc transporter atp-binding protein
CYJ15_RS17845	COG3457	Alanine racemase
CYJ15_RS17855	COG1126	abc transporter atp-binding protein
CYJ15_RS17865	COG0765	amino acid transport
CYJ15_RS17875	COG0579	oxidoreductase
CYJ15_RS17880	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CYJ15_RS17885	COG0732	type I restriction modification DNA specificity domain
CYJ15_RS17890	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CYJ15_RS17905	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CYJ15_RS17915	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CYJ15_RS17920	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CYJ15_RS17925	COG4853	Protein conserved in bacteria
CYJ15_RS17930	COG4863	YycH protein
CYJ15_RS17935	COG5002	protein histidine kinase activity
CYJ15_RS17940	COG0745	RESPONSE REGULATOR receiver
CYJ15_RS17955	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CYJ15_RS17960	COG0305	Participates in initiation and elongation during chromosome replication
CYJ15_RS17965	COG0359	binds to the 23S rRNA
CYJ15_RS17970	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CYJ15_RS17980	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CYJ15_RS17990	COG0360	Binds together with S18 to 16S ribosomal RNA
CYJ15_RS17995	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CYJ15_RS18000	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CYJ15_RS18000	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CYJ15_RS18005	COG0307	riboflavin synthase, alpha
CYJ15_RS18010	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CYJ15_RS18010	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CYJ15_RS18015	COG0012	GTP binding
CYJ15_RS18020	COG4481	Protein conserved in bacteria
CYJ15_RS18025	COG0668	transmembrane transport
CYJ15_RS18040	COG1475	DNA binding
CYJ15_RS18045	COG1192	Involved in chromosome partitioning
CYJ15_RS18050	COG1475	DNA binding
CYJ15_RS18055	COG0357	Ribosomal RNA small subunit methyltransferase G
CYJ15_RS18060	COG0445	tRNA wobble uridine modification
CYJ15_RS18065	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CYJ15_RS18070	COG1847	R3H domain protein
CYJ15_RS18075	COG0706	membrane insertase activity
CYJ15_RS18080	COG0594	ribonuclease P activity
CYJ15_RS18085	COG0230	Belongs to the bacterial ribosomal protein bL34 family