BH_RS00015	SM00382	ATPases associated with a variety of cellular activities
BH_RS00015	SM00760	Bacterial dnaA protein helix-turn-helix domain
BH_RS00020	SM00480	DNA polymerase III beta subunit
BH_RS00040	SM00387	Histidine kinase-like ATPases
BH_RS00040	SM00433	TopoisomeraseII
BH_RS00045	SM00434	DNA Topoisomerase IV
BH_RS00050	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS00125	SM00116	Domain in cystathionine beta-synthase and other proteins.
BH_RS00125	SM01240	BH_RS00125
BH_RS00130	SM00936	Penicillin-binding protein 5, C-terminal domain 
BH_RS00160	SM00382	ATPases associated with a variety of cellular activities
BH_RS00165	SM00382	ATPases associated with a variety of cellular activities
BH_RS00195	SM00382	ATPases associated with a variety of cellular activities
BH_RS00205	SM00493	BH_RS00205
BH_RS00290	SM00966	SpoVT / AbrB like domain 
BH_RS00295	SM00933	BH_RS00295
BH_RS00315	SM01208	BH_RS00315
BH_RS00320	SM00493	BH_RS00320
BH_RS00325	SM00650	Ribosomal RNA adenine dimethylases
BH_RS00370	SM01400	BH_RS00370
BH_RS00390	SM00487	DEAD-like helicases superfamily
BH_RS00390	SM00490	helicase superfamily c-terminal domain
BH_RS00390	SM00982	BH_RS00390
BH_RS00390	SM01058	CarD-like/TRCF domain
BH_RS00395	SM00966	SpoVT / AbrB like domain 
BH_RS00410	SM00363	S4 RNA-binding domain
BH_RS00430	SM00316	Ribosomal protein S1-like RNA-binding domain
BH_RS00440	SM00331	Sigma factor PP2C-like phosphatases
BH_RS00440	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BH_RS00450	SM00220	Serine/Threonine protein kinases, catalytic domain
BH_RS00465	SM00977	TilS substrate C-terminal domain
BH_RS00475	SM00382	ATPases associated with a variety of cellular activities
BH_RS00520	SM00905	Dihydroneopterin aldolase
BH_RS00530	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS00650	SM00382	ATPases associated with a variety of cellular activities
BH_RS00650	SM01086	C-terminal, D2-small domain, of ClpB protein
BH_RS00655	SM00382	ATPases associated with a variety of cellular activities
BH_RS00665	SM00670	Large family of predicted nucleotide-binding domains
BH_RS00690	SM00840	BH_RS00690
BH_RS00695	SM00535	Ribonuclease III family
BH_RS00700	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BH_RS00720	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BH_RS00720	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BH_RS00725	SM00649	Ribosomal protein L11/L12
BH_RS00760	SM00663	RNA polymerase I subunit A N-terminus
BH_RS00780	SM00838	Elongation factor G C-terminus
BH_RS00780	SM00889	Elongation factor G, domain IV
BH_RS00790	SM01403	BH_RS00790
BH_RS00810	SM01382	BH_RS00810
BH_RS00810	SM01383	BH_RS00810
BH_RS00825	SM00322	K homology RNA-binding domain
BH_RS00845	SM01374	BH_RS00845
BH_RS00850	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BH_RS00915	SM00316	Ribosomal protein S1-like RNA-binding domain
BH_RS00935	SM00662	RNA polymerases D
BH_RS00945	SM00382	ATPases associated with a variety of cellular activities
BH_RS00950	SM00382	ATPases associated with a variety of cellular activities
BH_RS00975	SM00062	Bacterial periplasmic substrate-binding proteins
BH_RS00985	SM00382	ATPases associated with a variety of cellular activities
BH_RS01005	SM01321	BH_RS01005
BH_RS01030	SM00382	ATPases associated with a variety of cellular activities
BH_RS01075	SM00829	Enoylreductase
BH_RS01085	SM00829	Enoylreductase
BH_RS01200	SM00344	helix_turn_helix ASNC type
BH_RS01210	SM00861	Transketolase, pyrimidine binding domain
BH_RS01230	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BH_RS01295	SM00100	Cyclic nucleotide-monophosphate binding domain
BH_RS01295	SM00419	helix_turn_helix, cAMP Regulatory protein
BH_RS01320	SM00606	Cellulose Binding Domain Type IV
BH_RS01335	SM00646	BH_RS01335
BH_RS01350	SM01251	BH_RS01350
BH_RS01400	SM00382	ATPases associated with a variety of cellular activities
BH_RS01405	SM00382	ATPases associated with a variety of cellular activities
BH_RS01440	SM00988	UreE urease accessory protein, N-terminal domain
BH_RS01545	SM01321	BH_RS01545
BH_RS01555	SM00448	cheY-homologous receiver domain
BH_RS01555	SM00862	Transcriptional regulatory protein, C terminal
BH_RS01560	SM00387	Histidine kinase-like ATPases
BH_RS01565	SM00382	ATPases associated with a variety of cellular activities
BH_RS01610	SM00382	ATPases associated with a variety of cellular activities
BH_RS01630	SM00855	Phosphoglycerate mutase family
BH_RS01635	SM00382	ATPases associated with a variety of cellular activities
BH_RS01645	SM00448	cheY-homologous receiver domain
BH_RS01645	SM00862	Transcriptional regulatory protein, C terminal
BH_RS01650	SM00387	Histidine kinase-like ATPases
BH_RS01660	SM00382	ATPases associated with a variety of cellular activities
BH_RS01695	SM01061	CAT RNA binding domain
BH_RS01775	SM00382	ATPases associated with a variety of cellular activities
BH_RS01885	SM00487	DEAD-like helicases superfamily
BH_RS01885	SM00490	helicase superfamily c-terminal domain
BH_RS01925	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS01930	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS01950	SM00382	ATPases associated with a variety of cellular activities
BH_RS01955	SM00382	ATPases associated with a variety of cellular activities
BH_RS02000	SM01057	Eukaryotic-type carbonic anhydrase
BH_RS02015	SM00829	Enoylreductase
BH_RS02020	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS02035	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BH_RS02065	SM00448	cheY-homologous receiver domain
BH_RS02065	SM00862	Transcriptional regulatory protein, C terminal
BH_RS02070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS02070	SM00387	Histidine kinase-like ATPases
BH_RS02070	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS02110	SM00650	Ribosomal RNA adenine dimethylases
BH_RS02120	SM00382	ATPases associated with a variety of cellular activities
BH_RS02125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS02160	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS02170	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS02185	SM00091	PAS domain
BH_RS02185	SM00387	Histidine kinase-like ATPases
BH_RS02190	SM00448	cheY-homologous receiver domain
BH_RS02195	SM00919	Malic enzyme, NAD binding domain
BH_RS02195	SM01274	BH_RS02195
BH_RS02205	SM00871	Bacterial transcription activator, effector binding domain
BH_RS02240	SM00422	helix_turn_helix, mercury resistance
BH_RS02245	SM00649	Ribosomal protein L11/L12
BH_RS02255	SM00420	helix_turn_helix, Deoxyribose operon repressor
BH_RS02265	SM00642	Alpha-amylase domain
BH_RS02265	SM01066	Carbohydrate binding domain
BH_RS02295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS02295	SM00866	BH_RS02295
BH_RS02315	SM00344	helix_turn_helix ASNC type
BH_RS02360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS02405	SM00382	ATPases associated with a variety of cellular activities
BH_RS02430	SM00382	ATPases associated with a variety of cellular activities
BH_RS02445	SM00382	ATPases associated with a variety of cellular activities
BH_RS02460	SM00382	ATPases associated with a variety of cellular activities
BH_RS02465	SM01260	BH_RS02465
BH_RS02480	SM01260	BH_RS02480
BH_RS02495	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS02540	SM00382	ATPases associated with a variety of cellular activities
BH_RS02575	SM00849	Metallo-beta-lactamase superfamily
BH_RS02610	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS02645	SM00858	BH_RS02645
BH_RS02665	SM00710	Parallel beta-helix repeats
BH_RS02715	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS02740	SM00116	Domain in cystathionine beta-synthase and other proteins.
BH_RS02740	SM00924	MgtE intracellular N domain
BH_RS02745	SM00382	ATPases associated with a variety of cellular activities
BH_RS02785	SM01005	Alanine racemase, C-terminal domain
BH_RS02810	SM00387	Histidine kinase-like ATPases
BH_RS02815	SM00331	Sigma factor PP2C-like phosphatases
BH_RS02815	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BH_RS02835	SM00331	Sigma factor PP2C-like phosphatases
BH_RS02840	SM00316	Ribosomal protein S1-like RNA-binding domain
BH_RS02840	SM00732	Likely ribonuclease with RNase H fold.
BH_RS02845	SM00731	SprT homologues.
BH_RS02940	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BH_RS02940	SM00387	Histidine kinase-like ATPases
BH_RS02940	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS02945	SM00382	ATPases associated with a variety of cellular activities
BH_RS02945	SM00448	cheY-homologous receiver domain
BH_RS03010	SM00382	ATPases associated with a variety of cellular activities
BH_RS03015	SM00881	CoA binding domain
BH_RS03070	SM00883	Chaperonin 10 Kd subunit
BH_RS03090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS03115	SM00382	ATPases associated with a variety of cellular activities
BH_RS03120	SM00382	ATPases associated with a variety of cellular activities
BH_RS03145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS03160	SM00421	helix_turn_helix, Lux Regulon
BH_RS03160	SM00448	cheY-homologous receiver domain
BH_RS03225	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS03225	SM00871	Bacterial transcription activator, effector binding domain
BH_RS03250	SM00382	ATPases associated with a variety of cellular activities
BH_RS03275	SM00382	ATPases associated with a variety of cellular activities
BH_RS03285	SM00460	Transglutaminase/protease-like homologues
BH_RS03360	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BH_RS03400	SM01001	AIR carboxylase
BH_RS03410	SM00998	Adenylosuccinate lyase C-terminus
BH_RS03425	SM01211	BH_RS03425
BH_RS03450	SM00798	AICARFT/IMPCHase bienzyme
BH_RS03450	SM00851	MGS-like domain
BH_RS03455	SM01209	BH_RS03455
BH_RS03455	SM01210	BH_RS03455
BH_RS03485	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS03505	SM00347	helix_turn_helix multiple antibiotic resistance protein
BH_RS03510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS03525	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BH_RS03525	SM00292	breast cancer carboxy-terminal domain
BH_RS03525	SM00532	Ligase N family
BH_RS03535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS03540	SM00382	ATPases associated with a variety of cellular activities
BH_RS03585	SM00028	Tetratricopeptide repeats
BH_RS03610	SM00845	GatB domain
BH_RS03625	SM00871	Bacterial transcription activator, effector binding domain
BH_RS03655	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BH_RS03660	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS03740	SM00257	Lysin motif
BH_RS03745	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS03765	SM00656	BH_RS03765
BH_RS03830	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS03840	SM00382	ATPases associated with a variety of cellular activities
BH_RS03845	SM00382	ATPases associated with a variety of cellular activities
BH_RS03895	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS03935	SM00327	von Willebrand factor (vWF) type A domain
BH_RS03965	SM00829	Enoylreductase
BH_RS04005	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BH_RS04010	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BH_RS04035	SM00382	ATPases associated with a variety of cellular activities
BH_RS04040	SM00387	Histidine kinase-like ATPases
BH_RS04045	SM00448	cheY-homologous receiver domain
BH_RS04045	SM00862	Transcriptional regulatory protein, C terminal
BH_RS04145	SM00858	BH_RS04145
BH_RS04160	SM00861	Transketolase, pyrimidine binding domain
BH_RS04200	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BH_RS04215	SM00872	Alpha mannosidase, middle domain
BH_RS04220	SM01149	BH_RS04220
BH_RS04225	SM00872	Alpha mannosidase, middle domain
BH_RS04230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS04230	SM00387	Histidine kinase-like ATPases
BH_RS04235	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS04235	SM00448	cheY-homologous receiver domain
BH_RS04275	SM00420	helix_turn_helix, Deoxyribose operon repressor
BH_RS04275	SM01134	BH_RS04275
BH_RS04315	SM00646	BH_RS04315
BH_RS04335	SM00382	ATPases associated with a variety of cellular activities
BH_RS04340	SM01022	BH_RS04340
BH_RS04350	SM00382	ATPases associated with a variety of cellular activities
BH_RS04355	SM00387	Histidine kinase-like ATPases
BH_RS04355	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS04360	SM00448	cheY-homologous receiver domain
BH_RS04360	SM00862	Transcriptional regulatory protein, C terminal
BH_RS04380	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BH_RS04390	SM00420	helix_turn_helix, Deoxyribose operon repressor
BH_RS04390	SM01134	BH_RS04390
BH_RS04435	SM00836	DALR anticodon binding domain
BH_RS04435	SM01016	Arginyl tRNA synthetase N terminal dom
BH_RS04485	SM01061	CAT RNA binding domain
BH_RS04495	SM00420	helix_turn_helix, Deoxyribose operon repressor
BH_RS04495	SM01134	BH_RS04495
BH_RS04515	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS04595	SM00344	helix_turn_helix ASNC type
BH_RS04615	SM00642	Alpha-amylase domain
BH_RS04620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS04620	SM00866	BH_RS04620
BH_RS04625	SM00098	Alkaline phosphatase homologues
BH_RS04635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS04635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS04655	SM00849	Metallo-beta-lactamase superfamily
BH_RS04700	SM00855	Phosphoglycerate mutase family
BH_RS04735	SM01022	BH_RS04735
BH_RS04750	SM00354	helix_turn _helix lactose operon repressor
BH_RS04815	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS04815	SM00866	BH_RS04815
BH_RS04825	SM00060	Fibronectin type 3 domain
BH_RS04825	SM00495	Chitin-binding domain type 3
BH_RS04825	SM00636	BH_RS04825
BH_RS04885	SM00478	endonuclease III
BH_RS04885	SM00525	BH_RS04885
BH_RS04905	SM00829	Enoylreductase
BH_RS04935	SM00382	ATPases associated with a variety of cellular activities
BH_RS04950	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS04955	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS05180	SM00487	DEAD-like helicases superfamily
BH_RS05180	SM00490	helicase superfamily c-terminal domain
BH_RS05275	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS05290	SM00091	PAS domain
BH_RS05290	SM00382	ATPases associated with a variety of cellular activities
BH_RS05340	SM00382	ATPases associated with a variety of cellular activities
BH_RS05355	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS05360	SM00387	Histidine kinase-like ATPases
BH_RS05420	SM00873	B3/4 domain
BH_RS05425	SM00567	E-Z type HEAT repeats
BH_RS05455	SM00382	ATPases associated with a variety of cellular activities
BH_RS05465	SM00763	PrkA AAA domain
BH_RS05510	SM00382	ATPases associated with a variety of cellular activities
BH_RS05560	SM00421	helix_turn_helix, Lux Regulon
BH_RS05560	SM00448	cheY-homologous receiver domain
BH_RS05615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS05615	SM00895	BH_RS05615
BH_RS05655	SM01329	BH_RS05655
BH_RS05685	SM00382	ATPases associated with a variety of cellular activities
BH_RS05710	SM00382	ATPases associated with a variety of cellular activities
BH_RS05775	SM00419	helix_turn_helix, cAMP Regulatory protein
BH_RS05925	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS05925	SM00448	cheY-homologous receiver domain
BH_RS05935	SM00382	ATPases associated with a variety of cellular activities
BH_RS05940	SM00382	ATPases associated with a variety of cellular activities
BH_RS05970	SM00878	Biotin carboxylase C-terminal domain
BH_RS06010	SM00382	ATPases associated with a variety of cellular activities
BH_RS06070	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS06075	SM00448	cheY-homologous receiver domain
BH_RS06075	SM00862	Transcriptional regulatory protein, C terminal
BH_RS06080	SM00387	Histidine kinase-like ATPases
BH_RS06080	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS06085	SM00382	ATPases associated with a variety of cellular activities
BH_RS06090	SM00382	ATPases associated with a variety of cellular activities
BH_RS06120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS06125	SM00382	ATPases associated with a variety of cellular activities
BH_RS06130	SM00382	ATPases associated with a variety of cellular activities
BH_RS06160	SM00448	cheY-homologous receiver domain
BH_RS06160	SM00862	Transcriptional regulatory protein, C terminal
BH_RS06165	SM00387	Histidine kinase-like ATPases
BH_RS06165	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS06175	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS06220	SM00347	helix_turn_helix multiple antibiotic resistance protein
BH_RS06250	SM00382	ATPases associated with a variety of cellular activities
BH_RS06290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS06290	SM00387	Histidine kinase-like ATPases
BH_RS06295	SM00421	helix_turn_helix, Lux Regulon
BH_RS06295	SM00448	cheY-homologous receiver domain
BH_RS06335	SM00062	Bacterial periplasmic substrate-binding proteins
BH_RS06345	SM00382	ATPases associated with a variety of cellular activities
BH_RS06350	SM01317	BH_RS06350
BH_RS06410	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BH_RS06415	SM00382	ATPases associated with a variety of cellular activities
BH_RS06435	SM01323	BH_RS06435
BH_RS06500	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS06500	SM00954	Region found in RelA / SpoT proteins
BH_RS06540	SM00354	helix_turn _helix lactose operon repressor
BH_RS06575	SM00382	ATPases associated with a variety of cellular activities
BH_RS06600	SM00028	Tetratricopeptide repeats
BH_RS06625	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BH_RS06635	SM00732	Likely ribonuclease with RNase H fold.
BH_RS06665	SM00382	ATPases associated with a variety of cellular activities
BH_RS06755	SM00646	BH_RS06755
BH_RS06800	SM00495	Chitin-binding domain type 3
BH_RS06815	SM01060	BH_RS06815
BH_RS06830	SM00411	bacterial (prokaryotic) histone like domain
BH_RS06910	SM01103	BH_RS06910
BH_RS06920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS06930	SM00316	Ribosomal protein S1-like RNA-binding domain
BH_RS06950	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BH_RS06960	SM00849	Metallo-beta-lactamase superfamily
BH_RS06995	SM00838	Elongation factor G C-terminus
BH_RS07000	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS07025	SM00271	DnaJ molecular chaperone homology domain
BH_RS07040	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS07045	SM01133	BH_RS07045
BH_RS07095	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS07140	SM00116	Domain in cystathionine beta-synthase and other proteins.
BH_RS07155	SM00400	zinc finger
BH_RS07155	SM00493	BH_RS07155
BH_RS07195	SM01058	CarD-like/TRCF domain
BH_RS07205	SM00487	DEAD-like helicases superfamily
BH_RS07205	SM00490	helicase superfamily c-terminal domain
BH_RS07210	SM00518	AP endonuclease family 2
BH_RS07220	SM00387	Histidine kinase-like ATPases
BH_RS07220	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS07225	SM00382	ATPases associated with a variety of cellular activities
BH_RS07250	SM00382	ATPases associated with a variety of cellular activities
BH_RS07405	SM00028	Tetratricopeptide repeats
BH_RS07515	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS07520	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS07590	SM00062	Bacterial periplasmic substrate-binding proteins
BH_RS07590	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BH_RS07600	SM00382	ATPases associated with a variety of cellular activities
BH_RS07740	SM00422	helix_turn_helix, mercury resistance
BH_RS07795	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BH_RS07810	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS07845	SM00354	helix_turn _helix lactose operon repressor
BH_RS07930	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BH_RS07940	SM00936	Penicillin-binding protein 5, C-terminal domain 
BH_RS07950	SM00387	Histidine kinase-like ATPases
BH_RS08005	SM00387	Histidine kinase-like ATPases
BH_RS08005	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS08005	SM00448	cheY-homologous receiver domain
BH_RS08020	SM00822	BH_RS08020
BH_RS08020	SM01007	Class II Aldolase and Adducin N-terminal domain
BH_RS08035	SM00420	helix_turn_helix, Deoxyribose operon repressor
BH_RS08035	SM01134	BH_RS08035
BH_RS08150	SM00363	S4 RNA-binding domain
BH_RS08170	SM00448	cheY-homologous receiver domain
BH_RS08170	SM00862	Transcriptional regulatory protein, C terminal
BH_RS08175	SM00091	PAS domain
BH_RS08175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS08175	SM00387	Histidine kinase-like ATPases
BH_RS08175	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS08205	SM00382	ATPases associated with a variety of cellular activities
BH_RS08235	SM00855	Phosphoglycerate mutase family
BH_RS08270	SM00257	Lysin motif
BH_RS08285	SM00257	Lysin motif
BH_RS08285	SM00631	BH_RS08285
BH_RS08305	SM00487	DEAD-like helicases superfamily
BH_RS08305	SM00490	helicase superfamily c-terminal domain
BH_RS08380	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BH_RS08390	SM00870	BH_RS08390
BH_RS08415	SM01018	B12 binding domain
BH_RS08440	SM00563	Phosphate acyltransferases
BH_RS08445	SM00316	Ribosomal protein S1-like RNA-binding domain
BH_RS08460	SM01207	BH_RS08460
BH_RS08475	SM01321	BH_RS08475
BH_RS08535	SM00562	BH_RS08535
BH_RS08540	SM00138	Methyltransferase, chemotaxis proteins 
BH_RS08615	SM00914	BH_RS08615
BH_RS08670	SM00851	MGS-like domain
BH_RS08715	SM00028	Tetratricopeptide repeats
BH_RS08720	SM00479	BH_RS08720
BH_RS08720	SM00487	DEAD-like helicases superfamily
BH_RS08720	SM00491	BH_RS08720
BH_RS08750	SM00478	endonuclease III
BH_RS08750	SM00525	BH_RS08750
BH_RS08770	SM00060	Fibronectin type 3 domain
BH_RS08795	SM00450	Rhodanese Homology Domain
BH_RS08815	SM00260	Two component signalling adaptor domain
BH_RS08815	SM00448	cheY-homologous receiver domain
BH_RS08845	SM00567	E-Z type HEAT repeats
BH_RS08845	SM00932	Scaffold protein Nfu/NifU N terminal
BH_RS08960	SM01130	BH_RS08960
BH_RS08980	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS08980	SM00876	Biotin and Thiamin Synthesis associated domain
BH_RS08985	SM00478	endonuclease III
BH_RS09015	SM00382	ATPases associated with a variety of cellular activities
BH_RS09045	SM00487	DEAD-like helicases superfamily
BH_RS09045	SM00490	helicase superfamily c-terminal domain
BH_RS09075	SM00981	BH_RS09075
BH_RS09090	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BH_RS09105	SM00240	Forkhead associated domain
BH_RS09105	SM00862	Transcriptional regulatory protein, C terminal
BH_RS09150	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS09170	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BH_RS09180	SM00491	BH_RS09180
BH_RS09215	SM00382	ATPases associated with a variety of cellular activities
BH_RS09220	SM00382	ATPases associated with a variety of cellular activities
BH_RS09230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS09230	SM00387	Histidine kinase-like ATPases
BH_RS09230	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS09235	SM00257	Lysin motif
BH_RS09260	SM00448	cheY-homologous receiver domain
BH_RS09260	SM00862	Transcriptional regulatory protein, C terminal
BH_RS09265	SM00387	Histidine kinase-like ATPases
BH_RS09265	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS09275	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS09285	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS09300	SM00796	Allophanate hydrolase subunit 1
BH_RS09305	SM00797	Allophanate hydrolase subunit 2
BH_RS09310	SM00346	helix_turn_helix isocitrate lyase regulation
BH_RS09330	SM00861	Transketolase, pyrimidine binding domain
BH_RS09345	SM00382	ATPases associated with a variety of cellular activities
BH_RS09350	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS09350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS09385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS09385	SM00895	BH_RS09385
BH_RS09395	SM00849	Metallo-beta-lactamase superfamily
BH_RS09410	SM00825	Beta-ketoacyl synthase
BH_RS09485	SM00354	helix_turn _helix lactose operon repressor
BH_RS09500	SM00640	Glycosyl hydrolases family 32
BH_RS09515	SM00813	Alpha-L-arabinofuranosidase C-terminus
BH_RS09555	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS09565	SM01007	Class II Aldolase and Adducin N-terminal domain
BH_RS09580	SM00813	Alpha-L-arabinofuranosidase C-terminus
BH_RS09585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS09605	SM00382	ATPases associated with a variety of cellular activities
BH_RS09635	SM00954	Region found in RelA / SpoT proteins
BH_RS09655	SM00420	helix_turn_helix, Deoxyribose operon repressor
BH_RS09685	SM01321	BH_RS09685
BH_RS09710	SM00382	ATPases associated with a variety of cellular activities
BH_RS09740	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS09750	SM00606	Cellulose Binding Domain Type IV
BH_RS09750	SM01217	BH_RS09750
BH_RS09755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS09755	SM00387	Histidine kinase-like ATPases
BH_RS09760	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS09760	SM00448	cheY-homologous receiver domain
BH_RS09805	SM00091	PAS domain
BH_RS09805	SM00387	Histidine kinase-like ATPases
BH_RS09805	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS09845	SM00354	helix_turn _helix lactose operon repressor
BH_RS09930	SM00448	cheY-homologous receiver domain
BH_RS09930	SM00862	Transcriptional regulatory protein, C terminal
BH_RS09935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS09935	SM00387	Histidine kinase-like ATPases
BH_RS09935	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS09965	SM00829	Enoylreductase
BH_RS09970	SM01007	Class II Aldolase and Adducin N-terminal domain
BH_RS09975	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BH_RS10080	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BH_RS10095	SM01060	BH_RS10095
BH_RS10130	SM00028	Tetratricopeptide repeats
BH_RS10160	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BH_RS10245	SM00829	Enoylreductase
BH_RS10250	SM00387	Histidine kinase-like ATPases
BH_RS10250	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS10250	SM00448	cheY-homologous receiver domain
BH_RS10265	SM01043	Bacterial transcriptional activator domain
BH_RS10275	SM00354	helix_turn _helix lactose operon repressor
BH_RS10305	SM00382	ATPases associated with a variety of cellular activities
BH_RS10350	SM00028	Tetratricopeptide repeats
BH_RS10425	SM00028	Tetratricopeptide repeats
BH_RS10485	SM00347	helix_turn_helix multiple antibiotic resistance protein
BH_RS10565	SM00382	ATPases associated with a variety of cellular activities
BH_RS10570	SM00382	ATPases associated with a variety of cellular activities
BH_RS10610	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS10640	SM00450	Rhodanese Homology Domain
BH_RS10665	SM00421	helix_turn_helix, Lux Regulon
BH_RS10665	SM00448	cheY-homologous receiver domain
BH_RS10670	SM00382	ATPases associated with a variety of cellular activities
BH_RS10685	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BH_RS10725	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS10725	SM00448	cheY-homologous receiver domain
BH_RS10770	SM00421	helix_turn_helix, Lux Regulon
BH_RS10775	SM00871	Bacterial transcription activator, effector binding domain
BH_RS10780	SM00633	Glycosyl hydrolase family 10
BH_RS10795	SM00421	helix_turn_helix, Lux Regulon
BH_RS10795	SM00448	cheY-homologous receiver domain
BH_RS10805	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS10860	SM00346	helix_turn_helix isocitrate lyase regulation
BH_RS10870	SM00434	DNA Topoisomerase IV
BH_RS10875	SM00387	Histidine kinase-like ATPases
BH_RS10875	SM00433	TopoisomeraseII
BH_RS10880	SM00881	CoA binding domain
BH_RS10980	SM00347	helix_turn_helix multiple antibiotic resistance protein
BH_RS11000	SM00420	helix_turn_helix, Deoxyribose operon repressor
BH_RS11000	SM01134	BH_RS11000
BH_RS11040	SM00347	helix_turn_helix multiple antibiotic resistance protein
BH_RS11055	SM00382	ATPases associated with a variety of cellular activities
BH_RS11055	SM01086	C-terminal, D2-small domain, of ClpB protein
BH_RS11060	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BH_RS11060	SM00475	5'-3' exonuclease
BH_RS11115	SM00849	Metallo-beta-lactamase superfamily
BH_RS11170	SM00861	Transketolase, pyrimidine binding domain
BH_RS11180	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BH_RS11205	SM00421	helix_turn_helix, Lux Regulon
BH_RS11205	SM00448	cheY-homologous receiver domain
BH_RS11240	SM00354	helix_turn _helix lactose operon repressor
BH_RS11280	SM00354	helix_turn _helix lactose operon repressor
BH_RS11290	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS11310	SM00267	diguanylate cyclase
BH_RS11310	SM00448	cheY-homologous receiver domain
BH_RS11315	SM00267	diguanylate cyclase
BH_RS11315	SM00448	cheY-homologous receiver domain
BH_RS11335	SM00226	Low molecular weight phosphatase family
BH_RS11430	SM00882	Coenzyme A transferase
BH_RS11435	SM00882	Coenzyme A transferase
BH_RS11450	SM00260	Two component signalling adaptor domain
BH_RS11450	SM00448	cheY-homologous receiver domain
BH_RS11455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS11455	SM00387	Histidine kinase-like ATPases
BH_RS11455	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS11460	SM00448	cheY-homologous receiver domain
BH_RS11460	SM00862	Transcriptional regulatory protein, C terminal
BH_RS11490	SM00382	ATPases associated with a variety of cellular activities
BH_RS11515	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS11515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS11525	SM00052	Putative diguanylate phosphodiesterase
BH_RS11530	SM00903	Flavin reductase like domain
BH_RS11550	SM00481	DNA polymerase alpha chain like domain
BH_RS11580	SM00382	ATPases associated with a variety of cellular activities
BH_RS11595	SM00257	Lysin motif
BH_RS11595	SM00636	BH_RS11595
BH_RS11695	SM00354	helix_turn _helix lactose operon repressor
BH_RS11740	SM00382	ATPases associated with a variety of cellular activities
BH_RS11775	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BH_RS11775	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BH_RS11800	SM00382	ATPases associated with a variety of cellular activities
BH_RS11805	SM00382	ATPases associated with a variety of cellular activities
BH_RS11885	SM00861	Transketolase, pyrimidine binding domain
BH_RS11895	SM00857	Resolvase, N terminal domain
BH_RS11920	SM01230	BH_RS11920
BH_RS11935	SM00382	ATPases associated with a variety of cellular activities
BH_RS11960	SM00853	MutL C terminal dimerisation domain
BH_RS11960	SM01340	BH_RS11960
BH_RS11965	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BH_RS11965	SM00534	ATPase domain of DNA mismatch repair MUTS family
BH_RS11980	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS12010	SM00322	K homology RNA-binding domain
BH_RS12010	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS12035	SM00382	ATPases associated with a variety of cellular activities
BH_RS12040	SM00487	DEAD-like helicases superfamily
BH_RS12040	SM00490	helicase superfamily c-terminal domain
BH_RS12045	SM00852	Probable molybdopterin binding domain
BH_RS12060	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS12090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS12090	SM00866	BH_RS12090
BH_RS12095	SM00382	ATPases associated with a variety of cellular activities
BH_RS12095	SM00843	BH_RS12095
BH_RS12110	SM00849	Metallo-beta-lactamase superfamily
BH_RS12115	SM01130	BH_RS12115
BH_RS12125	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BH_RS12155	SM00316	Ribosomal protein S1-like RNA-binding domain
BH_RS12155	SM00322	K homology RNA-binding domain
BH_RS12160	SM01387	BH_RS12160
BH_RS12165	SM00904	Riboflavin kinase
BH_RS12200	SM00316	Ribosomal protein S1-like RNA-binding domain
BH_RS12200	SM00322	K homology RNA-binding domain
BH_RS12210	SM00479	BH_RS12210
BH_RS12210	SM00481	DNA polymerase alpha chain like domain
BH_RS12220	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BH_RS12295	SM00448	cheY-homologous receiver domain
BH_RS12305	SM00382	ATPases associated with a variety of cellular activities
BH_RS12305	SM00962	SRP54-type protein, GTPase domain
BH_RS12340	SM00448	cheY-homologous receiver domain
BH_RS12395	SM00382	ATPases associated with a variety of cellular activities
BH_RS12435	SM00382	ATPases associated with a variety of cellular activities
BH_RS12435	SM01086	C-terminal, D2-small domain, of ClpB protein
BH_RS12455	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BH_RS12455	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BH_RS12455	SM00493	BH_RS12455
BH_RS12465	SM00881	CoA binding domain
BH_RS12540	SM00382	ATPases associated with a variety of cellular activities
BH_RS12540	SM00962	SRP54-type protein, GTPase domain
BH_RS12540	SM00963	SRP54-type protein, helical bundle domain
BH_RS12550	SM00382	ATPases associated with a variety of cellular activities
BH_RS12550	SM00962	SRP54-type protein, GTPase domain
BH_RS12550	SM00963	SRP54-type protein, helical bundle domain
BH_RS12555	SM00968	SMC proteins Flexible Hinge Domain
BH_RS12565	SM00358	Double-stranded RNA binding motif
BH_RS12565	SM00535	Ribonuclease III family
BH_RS12570	SM00823	Phosphopantetheine attachment site
BH_RS12575	SM00822	BH_RS12575
BH_RS12580	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BH_RS12595	SM00487	DEAD-like helicases superfamily
BH_RS12595	SM00490	helicase superfamily c-terminal domain
BH_RS12610	SM01120	BH_RS12610
BH_RS12610	SM01121	BH_RS12610
BH_RS12640	SM00220	Serine/Threonine protein kinases, catalytic domain
BH_RS12640	SM00740	BH_RS12640
BH_RS12645	SM00331	Sigma factor PP2C-like phosphatases
BH_RS12645	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BH_RS12665	SM00487	DEAD-like helicases superfamily
BH_RS12665	SM00490	helicase superfamily c-terminal domain
BH_RS12675	SM01409	BH_RS12675
BH_RS12680	SM00072	Guanylate kinase homologues.
BH_RS12695	SM00831	Cation transporter/ATPase, N-terminus
BH_RS12755	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS12790	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BH_RS12805	SM00851	MGS-like domain
BH_RS12805	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BH_RS12805	SM01209	BH_RS12805
BH_RS12810	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BH_RS12835	SM00363	S4 RNA-binding domain
BH_RS12860	SM00363	S4 RNA-binding domain
BH_RS12910	SM00864	Tubulin/FtsZ family, GTPase domain
BH_RS12910	SM00865	Tubulin/FtsZ family, C-terminal domain
BH_RS12915	SM00842	Cell division protein FtsA
BH_RS12975	SM00740	BH_RS12975
BH_RS12980	SM00740	BH_RS12980
BH_RS13045	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BH_RS13140	SM00116	Domain in cystathionine beta-synthase and other proteins.
BH_RS13210	SM01006	Siderophore biosynthesis protein domain
BH_RS13230	SM00878	Biotin carboxylase C-terminal domain
BH_RS13250	SM00670	Large family of predicted nucleotide-binding domains
BH_RS13270	SM00838	Elongation factor G C-terminus
BH_RS13345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS13350	SM00382	ATPases associated with a variety of cellular activities
BH_RS13380	SM00861	Transketolase, pyrimidine binding domain
BH_RS13415	SM00849	Metallo-beta-lactamase superfamily
BH_RS13480	SM01350	BH_RS13480
BH_RS13510	SM00382	ATPases associated with a variety of cellular activities
BH_RS13540	SM00014	Acid phosphatase homologues
BH_RS13575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS13595	SM00382	ATPases associated with a variety of cellular activities
BH_RS13605	SM00448	cheY-homologous receiver domain
BH_RS13605	SM00862	Transcriptional regulatory protein, C terminal
BH_RS13645	SM00116	Domain in cystathionine beta-synthase and other proteins.
BH_RS13665	SM00448	cheY-homologous receiver domain
BH_RS13670	SM00387	Histidine kinase-like ATPases
BH_RS13680	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BH_RS13705	SM01038	Beta galactosidase small chain
BH_RS13725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS13730	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS13730	SM00448	cheY-homologous receiver domain
BH_RS13785	SM00091	PAS domain
BH_RS13785	SM00382	ATPases associated with a variety of cellular activities
BH_RS13845	SM00448	cheY-homologous receiver domain
BH_RS13850	SM00091	PAS domain
BH_RS13850	SM00387	Histidine kinase-like ATPases
BH_RS13905	SM00861	Transketolase, pyrimidine binding domain
BH_RS13920	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BH_RS13925	SM00091	PAS domain
BH_RS13925	SM00382	ATPases associated with a variety of cellular activities
BH_RS13960	SM00448	cheY-homologous receiver domain
BH_RS13970	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BH_RS13985	SM00363	S4 RNA-binding domain
BH_RS13990	SM00861	Transketolase, pyrimidine binding domain
BH_RS14030	SM00878	Biotin carboxylase C-terminal domain
BH_RS14080	SM00382	ATPases associated with a variety of cellular activities
BH_RS14090	SM00841	Elongation factor P, C-terminal
BH_RS14090	SM01185	BH_RS14090
BH_RS14130	SM00529	Helix-turn-helix diphteria tox regulatory element
BH_RS14160	SM00450	Rhodanese Homology Domain
BH_RS14180	SM00487	DEAD-like helicases superfamily
BH_RS14180	SM00490	helicase superfamily c-terminal domain
BH_RS14200	SM00849	Metallo-beta-lactamase superfamily
BH_RS14245	SM01234	BH_RS14245
BH_RS14325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS14365	SM01321	BH_RS14365
BH_RS14400	SM00954	Region found in RelA / SpoT proteins
BH_RS14410	SM01118	BH_RS14410
BH_RS14420	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BH_RS14445	SM00155	Phospholipase D. Active site motifs.
BH_RS14480	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS14540	SM00257	Lysin motif
BH_RS14555	SM00825	Beta-ketoacyl synthase
BH_RS14615	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BH_RS14620	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BH_RS14640	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BH_RS14655	SM00642	Alpha-amylase domain
BH_RS14685	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS14705	SM00487	DEAD-like helicases superfamily
BH_RS14705	SM00490	helicase superfamily c-terminal domain
BH_RS14735	SM00450	Rhodanese Homology Domain
BH_RS14750	SM00354	helix_turn _helix lactose operon repressor
BH_RS14770	SM00642	Alpha-amylase domain
BH_RS14805	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BH_RS14870	SM00382	ATPases associated with a variety of cellular activities
BH_RS14870	SM00448	cheY-homologous receiver domain
BH_RS14875	SM00062	Bacterial periplasmic substrate-binding proteins
BH_RS14875	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BH_RS14875	SM00387	Histidine kinase-like ATPases
BH_RS14875	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS14885	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS14920	SM00914	BH_RS14920
BH_RS14960	SM00448	cheY-homologous receiver domain
BH_RS14965	SM00260	Two component signalling adaptor domain
BH_RS14970	SM00073	Histidine Phosphotransfer domain
BH_RS14970	SM00260	Two component signalling adaptor domain
BH_RS14970	SM00387	Histidine kinase-like ATPases
BH_RS14970	SM01231	BH_RS14970
BH_RS14975	SM00052	Putative diguanylate phosphodiesterase
BH_RS14975	SM00267	diguanylate cyclase
BH_RS14990	SM00382	ATPases associated with a variety of cellular activities
BH_RS15010	SM00326	Src homology 3 domains
BH_RS15065	SM00382	ATPases associated with a variety of cellular activities
BH_RS15090	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS15100	SM00226	Low molecular weight phosphatase family
BH_RS15110	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS15115	SM01266	BH_RS15115
BH_RS15120	SM00849	Metallo-beta-lactamase superfamily
BH_RS15135	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BH_RS15170	SM00316	Ribosomal protein S1-like RNA-binding domain
BH_RS15205	SM00852	Probable molybdopterin binding domain
BH_RS15210	SM00852	Probable molybdopterin binding domain
BH_RS15220	SM00448	cheY-homologous receiver domain
BH_RS15280	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BH_RS15280	SM00267	diguanylate cyclase
BH_RS15325	SM01004	Delta-aminolevulinic acid dehydratase
BH_RS15355	SM00382	ATPases associated with a variety of cellular activities
BH_RS15355	SM00464	Found in ATP-dependent protease La (LON)
BH_RS15360	SM00382	ATPases associated with a variety of cellular activities
BH_RS15365	SM00382	ATPases associated with a variety of cellular activities
BH_RS15365	SM00994	ClpX C4-type zinc finger
BH_RS15365	SM01086	C-terminal, D2-small domain, of ClpB protein
BH_RS15390	SM01329	BH_RS15390
BH_RS15395	SM00917	LeuA allosteric (dimerisation) domain
BH_RS15460	SM00909	Sporulation and spore germination
BH_RS15470	SM00347	helix_turn_helix multiple antibiotic resistance protein
BH_RS15485	SM00421	helix_turn_helix, Lux Regulon
BH_RS15495	SM00347	helix_turn_helix multiple antibiotic resistance protein
BH_RS15580	SM00465	GIY-YIG type nucleases (URI domain)
BH_RS15590	SM00893	Electron transfer flavoprotein domain
BH_RS15595	SM00893	Electron transfer flavoprotein domain
BH_RS15625	SM00463	Small MutS-related domain
BH_RS15625	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BH_RS15625	SM00534	ATPase domain of DNA mismatch repair MUTS family
BH_RS15630	SM00481	DNA polymerase alpha chain like domain
BH_RS15630	SM00483	DNA polymerase X family
BH_RS15645	SM00873	B3/4 domain
BH_RS15645	SM00874	tRNA synthetase B5 domain
BH_RS15645	SM00896	Ferredoxin-fold anticodon binding domain
BH_RS15655	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BH_RS15675	SM00849	Metallo-beta-lactamase superfamily
BH_RS15705	SM00382	ATPases associated with a variety of cellular activities
BH_RS15745	SM00382	ATPases associated with a variety of cellular activities
BH_RS15800	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BH_RS15810	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS15815	SM00382	ATPases associated with a variety of cellular activities
BH_RS15840	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BH_RS15855	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BH_RS15855	SM01232	BH_RS15855
BH_RS15860	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BH_RS15860	SM00474	3'-5' exonuclease
BH_RS15860	SM00475	5'-3' exonuclease
BH_RS15860	SM00482	DNA polymerase A domain
BH_RS15865	SM00244	prohibitin homologues
BH_RS15870	SM00244	prohibitin homologues
BH_RS15875	SM00091	PAS domain
BH_RS15875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS15875	SM00387	Histidine kinase-like ATPases
BH_RS15875	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS15880	SM00448	cheY-homologous receiver domain
BH_RS15880	SM00862	Transcriptional regulatory protein, C terminal
BH_RS15890	SM01329	BH_RS15890
BH_RS15930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS15930	SM00895	BH_RS15930
BH_RS15935	SM00919	Malic enzyme, NAD binding domain
BH_RS15935	SM01274	BH_RS15935
BH_RS15940	SM00481	DNA polymerase alpha chain like domain
BH_RS15970	SM00116	Domain in cystathionine beta-synthase and other proteins.
BH_RS15985	SM00849	Metallo-beta-lactamase superfamily
BH_RS15995	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BH_RS15995	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BH_RS16045	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS16105	SM00981	BH_RS16105
BH_RS16130	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BH_RS16135	SM00363	S4 RNA-binding domain
BH_RS16135	SM01390	BH_RS16135
BH_RS16150	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS16160	SM00382	ATPases associated with a variety of cellular activities
BH_RS16180	SM00871	Bacterial transcription activator, effector binding domain
BH_RS16210	SM00116	Domain in cystathionine beta-synthase and other proteins.
BH_RS16210	SM00924	MgtE intracellular N domain
BH_RS16225	SM00363	S4 RNA-binding domain
BH_RS16235	SM00354	helix_turn _helix lactose operon repressor
BH_RS16240	SM00606	Cellulose Binding Domain Type IV
BH_RS16260	SM01321	BH_RS16260
BH_RS16275	SM00116	Domain in cystathionine beta-synthase and other proteins.
BH_RS16300	SM00354	helix_turn _helix lactose operon repressor
BH_RS16305	SM00830	Chorismate mutase type II
BH_RS16310	SM00842	Cell division protein FtsA
BH_RS16345	SM00843	BH_RS16345
BH_RS16395	SM00849	Metallo-beta-lactamase superfamily
BH_RS16415	SM00642	Alpha-amylase domain
BH_RS16460	SM00420	helix_turn_helix, Deoxyribose operon repressor
BH_RS16465	SM00363	S4 RNA-binding domain
BH_RS16520	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS16530	SM00947	Carbonic anhydrase
BH_RS16565	SM00382	ATPases associated with a variety of cellular activities
BH_RS16580	SM00382	ATPases associated with a variety of cellular activities
BH_RS16595	SM00725	NEAr Transporter domain
BH_RS16600	SM00725	NEAr Transporter domain
BH_RS16710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS16710	SM00866	BH_RS16710
BH_RS16760	SM00710	Parallel beta-helix repeats
BH_RS16825	SM00316	Ribosomal protein S1-like RNA-binding domain
BH_RS16830	SM00487	DEAD-like helicases superfamily
BH_RS16830	SM00490	helicase superfamily c-terminal domain
BH_RS16845	SM00344	helix_turn_helix ASNC type
BH_RS16870	SM00411	bacterial (prokaryotic) histone like domain
BH_RS16950	SM00481	DNA polymerase alpha chain like domain
BH_RS17020	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BH_RS17020	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BH_RS17020	SM00493	BH_RS17020
BH_RS17065	SM01120	BH_RS17065
BH_RS17130	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS17200	SM00387	Histidine kinase-like ATPases
BH_RS17200	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS17205	SM00448	cheY-homologous receiver domain
BH_RS17205	SM00862	Transcriptional regulatory protein, C terminal
BH_RS17250	SM00729	Elongator protein 3, MiaB family, Radical SAM
BH_RS17270	SM00382	ATPases associated with a variety of cellular activities
BH_RS17280	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS17295	SM00448	cheY-homologous receiver domain
BH_RS17300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS17300	SM00387	Histidine kinase-like ATPases
BH_RS17375	SM01321	BH_RS17375
BH_RS17400	SM00382	ATPases associated with a variety of cellular activities
BH_RS17415	SM00793	Accessory gene regulator B
BH_RS17425	SM00387	Histidine kinase-like ATPases
BH_RS17425	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS17430	SM01321	BH_RS17430
BH_RS17445	SM00382	ATPases associated with a variety of cellular activities
BH_RS17445	SM00930	BH_RS17445
BH_RS17500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS17505	SM00382	ATPases associated with a variety of cellular activities
BH_RS17520	SM00422	helix_turn_helix, mercury resistance
BH_RS17520	SM00871	Bacterial transcription activator, effector binding domain
BH_RS17540	SM00244	prohibitin homologues
BH_RS17575	SM00382	ATPases associated with a variety of cellular activities
BH_RS17580	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS17580	SM00871	Bacterial transcription activator, effector binding domain
BH_RS17600	SM00646	BH_RS17600
BH_RS17730	SM00470	ParB-like nuclease domain
BH_RS17765	SM00382	ATPases associated with a variety of cellular activities
BH_RS17810	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS17830	SM00316	Ribosomal protein S1-like RNA-binding domain
BH_RS17830	SM00357	Cold shock protein domain
BH_RS17830	SM00955	BH_RS17830
BH_RS17845	SM01192	BH_RS17845
BH_RS17845	SM01193	BH_RS17845
BH_RS17865	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BH_RS17925	SM00028	Tetratricopeptide repeats
BH_RS18040	SM00382	ATPases associated with a variety of cellular activities
BH_RS18045	SM00487	DEAD-like helicases superfamily
BH_RS18045	SM00490	helicase superfamily c-terminal domain
BH_RS18060	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BH_RS18065	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BH_RS18065	SM00245	tail specific protease
BH_RS18095	SM00937	BH_RS18095
BH_RS18100	SM00957	SecA DEAD-like domain
BH_RS18100	SM00958	SecA preprotein cross-linking domain
BH_RS18120	SM00357	Cold shock protein domain
BH_RS18200	SM00487	DEAD-like helicases superfamily
BH_RS18200	SM00490	helicase superfamily c-terminal domain
BH_RS18210	SM00421	helix_turn_helix, Lux Regulon
BH_RS18210	SM00448	cheY-homologous receiver domain
BH_RS18215	SM00387	Histidine kinase-like ATPases
BH_RS18240	SM00871	Bacterial transcription activator, effector binding domain
BH_RS18245	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS18245	SM00871	Bacterial transcription activator, effector binding domain
BH_RS18270	SM00382	ATPases associated with a variety of cellular activities
BH_RS18275	SM00382	ATPases associated with a variety of cellular activities
BH_RS18280	SM00344	helix_turn_helix ASNC type
BH_RS18300	SM00382	ATPases associated with a variety of cellular activities
BH_RS18305	SM00382	ATPases associated with a variety of cellular activities
BH_RS18340	SM01209	BH_RS18340
BH_RS18365	SM00382	ATPases associated with a variety of cellular activities
BH_RS18435	SM00382	ATPases associated with a variety of cellular activities
BH_RS18445	SM00422	helix_turn_helix, mercury resistance
BH_RS18460	SM00387	Histidine kinase-like ATPases
BH_RS18465	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS18465	SM00448	cheY-homologous receiver domain
BH_RS18535	SM00354	helix_turn _helix lactose operon repressor
BH_RS18550	SM00028	Tetratricopeptide repeats
BH_RS18555	SM00642	Alpha-amylase domain
BH_RS18585	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS18615	SM00028	Tetratricopeptide repeats
BH_RS18625	SM00984	UDP binding domain
BH_RS18685	SM00966	SpoVT / AbrB like domain 
BH_RS18705	SM00346	helix_turn_helix isocitrate lyase regulation
BH_RS18715	SM00354	helix_turn _helix lactose operon repressor
BH_RS18730	SM00382	ATPases associated with a variety of cellular activities
BH_RS18785	SM00479	BH_RS18785
BH_RS18790	SM00116	Domain in cystathionine beta-synthase and other proteins.
BH_RS18850	SM00382	ATPases associated with a variety of cellular activities
BH_RS18920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS18920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS18925	SM00226	Low molecular weight phosphatase family
BH_RS18955	SM00937	BH_RS18955
BH_RS18985	SM00357	Cold shock protein domain
BH_RS18985	SM00382	ATPases associated with a variety of cellular activities
BH_RS18985	SM00959	Rho termination factor, N-terminal domain
BH_RS19010	SM00448	cheY-homologous receiver domain
BH_RS19090	SM00155	Phospholipase D. Active site motifs.
BH_RS19115	SM00836	DALR anticodon binding domain
BH_RS19115	SM01016	Arginyl tRNA synthetase N terminal dom
BH_RS19150	SM00347	helix_turn_helix multiple antibiotic resistance protein
BH_RS19165	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BH_RS19170	SM00656	BH_RS19170
BH_RS19230	SM00631	BH_RS19230
BH_RS19235	SM00479	BH_RS19235
BH_RS19265	SM00448	cheY-homologous receiver domain
BH_RS19270	SM00091	PAS domain
BH_RS19270	SM00387	Histidine kinase-like ATPases
BH_RS19280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS19285	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS19285	SM00448	cheY-homologous receiver domain
BH_RS19325	SM00986	Uracil DNA glycosylase superfamily
BH_RS19325	SM00987	UreE urease accessory protein, C-terminal domain 
BH_RS19365	SM00422	helix_turn_helix, mercury resistance
BH_RS19385	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS19385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS19405	SM01230	BH_RS19405
BH_RS19410	SM00642	Alpha-amylase domain
BH_RS19450	SM00914	BH_RS19450
BH_RS19455	SM00344	helix_turn_helix ASNC type
BH_RS19505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS19525	SM00382	ATPases associated with a variety of cellular activities
BH_RS19535	SM00382	ATPases associated with a variety of cellular activities
BH_RS19540	SM00850	LytTr DNA-binding domain
BH_RS19550	SM00822	BH_RS19550
BH_RS19560	SM00882	Coenzyme A transferase
BH_RS19565	SM00382	ATPases associated with a variety of cellular activities
BH_RS19570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS19570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS19585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS19585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS19625	SM00448	cheY-homologous receiver domain
BH_RS19625	SM00862	Transcriptional regulatory protein, C terminal
BH_RS19630	SM00387	Histidine kinase-like ATPases
BH_RS19635	SM00382	ATPases associated with a variety of cellular activities
BH_RS19645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BH_RS19645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS19655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BH_RS19655	SM00866	BH_RS19655
BH_RS19755	SM01058	CarD-like/TRCF domain
BH_RS19790	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BH_RS19800	SM00382	ATPases associated with a variety of cellular activities
BH_RS19820	SM00829	Enoylreductase
BH_RS19880	SM00849	Metallo-beta-lactamase superfamily
BH_RS19905	SM00382	ATPases associated with a variety of cellular activities
BH_RS19925	SM00382	ATPases associated with a variety of cellular activities
BH_RS19930	SM00382	ATPases associated with a variety of cellular activities
BH_RS19960	SM00382	ATPases associated with a variety of cellular activities
BH_RS19980	SM00966	SpoVT / AbrB like domain 
BH_RS20055	SM00382	ATPases associated with a variety of cellular activities
BH_RS20060	SM00382	ATPases associated with a variety of cellular activities
BH_RS20115	SM00028	Tetratricopeptide repeats
BH_RS20155	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BH_RS20160	SM00849	Metallo-beta-lactamase superfamily
BH_RS20175	SM00091	PAS domain
BH_RS20175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BH_RS20175	SM00387	Histidine kinase-like ATPases
BH_RS20175	SM00388	His Kinase A (phosphoacceptor) domain
BH_RS20180	SM00448	cheY-homologous receiver domain
BH_RS20180	SM00862	Transcriptional regulatory protein, C terminal
BH_RS20210	SM00788	Adenylosuccinate synthetase
BH_RS20225	SM00267	diguanylate cyclase
BH_RS20250	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BH_RS20290	SM00347	helix_turn_helix multiple antibiotic resistance protein
BH_RS20350	SM00470	ParB-like nuclease domain
BH_RS20360	SM00470	ParB-like nuclease domain
BH_RS20370	SM01228	BH_RS20370
BH_RS20380	SM00393	Putative single-stranded nucleic acids-binding domain
BH_RS20380	SM01245	BH_RS20380
BH_RS20490	SM00646	BH_RS20490
BH_RS20510	SM00257	Lysin motif
BH_RS20515	SM00530	Helix-turn-helix XRE-family like proteins 
BH_RS20520	SM00646	BH_RS20520
BH_RS20530	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BH_RS20555	SM00342	helix_turn_helix, arabinose operon control protein
BH_RS20575	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BH_RS20575	SM00387	Histidine kinase-like ATPases
BH_RS20670	SM00646	BH_RS20670
