locus-tag	class	description
AB684_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AB684_RS00010	COG0592	DNA-directed DNA polymerase activity
AB684_RS00015	COG2501	S4 domain
AB684_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AB684_RS00030	COG0187	DNA topoisomerase II activity
AB684_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AB684_RS00070	COG0516	GMP reductase activity
AB684_RS00070	COG0517	IMP dehydrogenase activity
AB684_RS00075	COG1686	Belongs to the peptidase S11 family
AB684_RS00080	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
AB684_RS00085	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
AB684_RS00090	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AB684_RS00095	COG1929	Belongs to the glycerate kinase type-1 family
AB684_RS00100	COG2610	gluconate transmembrane transporter activity
AB684_RS00105	COG3835	regulator
AB684_RS00120	COG1428	Deoxynucleoside kinase
AB684_RS00125	COG1428	Deoxynucleoside kinase
AB684_RS00130	COG3858	chitin binding
AB684_RS00130	COG1388	LysM domain
AB684_RS00135	COG1335	isochorismatase
AB684_RS00140	COG0590	tRNA wobble adenosine to inosine editing
AB684_RS00150	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AB684_RS00155	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AB684_RS00160	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AB684_RS00200	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
AB684_RS00205	COG3853	Toxic anion resistance protein (TelA)
AB684_RS00210	COG1982	Orn Lys Arg decarboxylase major
AB684_RS00215	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AB684_RS00220	COG3870	Protein conserved in bacteria
AB684_RS00225	COG1728	Protein conserved in bacteria
AB684_RS00230	COG0470	DNA polymerase III
AB684_RS00235	COG1774	PSP1 C-terminal conserved region
AB684_RS00240	COG4467	Involved in initiation control of chromosome replication
AB684_RS00245	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AB684_RS00250	COG2827	Endonuclease containing a URI domain
AB684_RS00255	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AB684_RS00260	COG2002	toxin-antitoxin pair type II binding
AB684_RS00265	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AB684_RS00265	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AB684_RS00270	COG0084	hydrolase, TatD family'
AB684_RS00275	COG3583	domain protein
AB684_RS00275	COG3584	3D domain protein
AB684_RS00280	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AB684_RS00285	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AB684_RS00295	COG4466	Protein conserved in bacteria
AB684_RS00305	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AB684_RS00310	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AB684_RS00315	COG0251	oxidation-reduction process
AB684_RS00320	COG2088	sporulation resulting in formation of a cellular spore
AB684_RS00325	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AB684_RS00330	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AB684_RS00335	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AB684_RS00340	COG0193	aminoacyl-tRNA hydrolase activity
AB684_RS00350	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AB684_RS00355	COG2002	toxin-antitoxin pair type II binding
AB684_RS00360	COG2244	polysaccharide biosynthetic process
AB684_RS00365	COG3956	TIGRFAM MazG family protein
AB684_RS00370	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AB684_RS00385	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AB684_RS00390	COG1098	S1 RNA binding domain
AB684_RS00405	COG2208	phosphoserine phosphatase activity
AB684_RS00410	COG2304	oxidoreductase activity
AB684_RS00415	COG0515	serine threonine protein kinase
AB684_RS00420	COG0037	tRNA processing
AB684_RS00425	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AB684_RS00430	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AB684_RS00435	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
AB684_RS00440	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AB684_RS00445	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AB684_RS00450	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AB684_RS00460	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AB684_RS00465	COG0512	Glutamine amidotransferase of anthranilate synthase
AB684_RS00470	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AB684_RS00475	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AB684_RS00480	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AB684_RS00485	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AB684_RS00490	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AB684_RS00495	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AB684_RS00575	COG4463	regulation of RNA biosynthetic process
AB684_RS00580	COG3880	PFAM UvrB UvrC protein
AB684_RS00585	COG3869	Catalyzes the specific phosphorylation of arginine residues in
AB684_RS00590	COG0542	response to heat
AB684_RS00595	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AB684_RS00600	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
AB684_RS00605	COG4956	integral membrane protein (PIN domain superfamily)
AB684_RS00610	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AB684_RS00615	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AB684_RS00620	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AB684_RS00625	COG1045	serine acetyltransferase
AB684_RS00630	COG0215	cysteine-tRNA ligase activity
AB684_RS00635	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AB684_RS00640	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AB684_RS00645	COG3688	RNA-binding protein containing a PIN domain
AB684_RS00660	COG0250	Participates in transcription elongation, termination and antitermination
AB684_RS00665	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AB684_RS00670	COG0081	regulation of translation
AB684_RS00675	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AB684_RS00680	COG0222	ribosome binding
AB684_RS00685	COG2813	Specifically methylates the guanine in position
AB684_RS00690	COG0085	RNA polymerase activity
AB684_RS00695	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AB684_RS00700	COG1358	cellular component organization or biogenesis
AB684_RS00705	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AB684_RS00710	COG0049	tRNA binding
AB684_RS00715	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AB684_RS00720	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AB684_RS00730	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AB684_RS00735	COG0088	Forms part of the polypeptide exit tunnel
AB684_RS00740	COG0089	rRNA binding
AB684_RS00745	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AB684_RS00750	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AB684_RS00755	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AB684_RS00760	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AB684_RS00765	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AB684_RS00770	COG0255	Belongs to the universal ribosomal protein uL29 family
AB684_RS00775	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AB684_RS00780	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AB684_RS00785	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AB684_RS00790	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AB684_RS00795	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AB684_RS00800	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AB684_RS00805	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AB684_RS00810	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AB684_RS00815	COG1841	ribosomal large subunit assembly
AB684_RS00820	COG0200	Binds to the 23S rRNA
AB684_RS00825	COG0201	protein transport
AB684_RS00830	COG0563	adenylate kinase activity
AB684_RS00835	COG0024	Methionine aminopeptidase
AB684_RS00840	COG2163	COG2163 Ribosomal protein L14E L6E L27E
AB684_RS00845	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AB684_RS00850	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AB684_RS00855	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AB684_RS00860	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AB684_RS00865	COG0202	RNA polymerase activity
AB684_RS00870	COG0203	ribosomal protein L17
AB684_RS00875	COG1122	ATPase activity
AB684_RS00880	COG1122	ATPase activity
AB684_RS00885	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AB684_RS00890	COG0101	tRNA pseudouridine synthase activity
AB684_RS00895	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AB684_RS00900	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AB684_RS00905	COG2318	DinB family
AB684_RS00915	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_RS00920	COG0489	protein tyrosine kinase activity
AB684_RS00930	COG2194	sulfuric ester hydrolase activity
AB684_RS00935	COG0726	polysaccharide deacetylase
AB684_RS00965	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AB684_RS00975	COG0385	Bile acid
AB684_RS00990	COG3876	Protein conserved in bacteria
AB684_RS00995	COG1472	Belongs to the glycosyl hydrolase 3 family
AB684_RS01000	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AB684_RS01005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS01005	COG1263	PTS System
AB684_RS01010	COG1737	Transcriptional regulator
AB684_RS01015	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AB684_RS01020	COG1683	Conserved Protein
AB684_RS01055	COG1595	DNA-templated transcription, initiation
AB684_RS01060	COG5662	AntiSigma factor
AB684_RS01065	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AB684_RS01070	COG4856	YbbR-like protein
AB684_RS01075	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AB684_RS01080	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AB684_RS01100	COG1725	Transcriptional regulator
AB684_RS01105	COG0640	Transcriptional regulator
AB684_RS01110	COG2814	Major facilitator Superfamily
AB684_RS01120	COG1132	(ABC) transporter
AB684_RS01125	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AB684_RS01150	COG1011	Hydrolase
AB684_RS01155	COG1113	amino acid transport
AB684_RS01160	COG2851	Citrate transporter
AB684_RS01165	COG3181	Tripartite tricarboxylate transporter family receptor
AB684_RS01170	COG4565	transcriptional regulatory protein
AB684_RS01175	COG3290	protein histidine kinase activity
AB684_RS01190	COG2211	Major facilitator Superfamily
AB684_RS01210	COG1331	Highly conserved protein containing a thioredoxin domain
AB684_RS01215	COG3677	Transposase
AB684_RS01240	COG0477	Major facilitator Superfamily
AB684_RS01260	COG1283	sodium-dependent phosphate transmembrane transporter activity
AB684_RS01265	COG4682	membrane
AB684_RS01290	COG0697	spore germination
AB684_RS01295	COG2207	Transcriptional regulator
AB684_RS01295	COG1917	Cupin 2, conserved barrel domain protein
AB684_RS01315	COG0371	Dehydrogenase
AB684_RS01320	COG0840	transmembrane signaling receptor activity
AB684_RS01325	COG4213	ABC transporter substrate-binding protein
AB684_RS01340	COG4257	antibiotic catabolic process
AB684_RS01350	COG0833	amino acid
AB684_RS01355	COG2040	homocysteine
AB684_RS01365	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS01365	COG2190	(PTS) system
AB684_RS01365	COG1263	PTS System
AB684_RS01370	COG0789	Transcriptional regulator
AB684_RS01375	COG2323	membrane
AB684_RS01380	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AB684_RS01380	COG4451	ribulose bisphosphate carboxylase, small
AB684_RS01390	COG2205	protein histidine kinase activity
AB684_RS01395	COG1115	amino acid carrier protein
AB684_RS01400	COG2066	Belongs to the glutaminase family
AB684_RS01405	COG4191	Histidine kinase
AB684_RS01410	COG0784	Response regulator, receiver
AB684_RS01435	COG3540	Alkaline phosphatase
AB684_RS01440	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AB684_RS01445	COG0805	protein transport
AB684_RS01450	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AB684_RS01455	COG1012	belongs to the aldehyde dehydrogenase family
AB684_RS01460	COG2271	Major facilitator Superfamily
AB684_RS01465	COG4948	Mandelate Racemase Muconate Lactonizing
AB684_RS01470	COG2186	Transcriptional regulator
AB684_RS01475	COG2721	sulfolactate sulfo-lyase activity
AB684_RS01480	COG0745	RESPONSE REGULATOR receiver
AB684_RS01485	COG2205	protein histidine kinase activity
AB684_RS01490	COG1131	(ABC) transporter
AB684_RS01515	COG3173	Aminoglycoside phosphotransferase
AB684_RS01520	COG1846	Transcriptional regulator
AB684_RS01525	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_RS01545	COG0789	Transcriptional regulator
AB684_RS01570	COG0697	spore germination
AB684_RS01575	COG1714	RDD family
AB684_RS01580	COG3012	SEC-C Motif Domain Protein
AB684_RS01580	COG1405	negative regulation of cell septum assembly
AB684_RS01585	COG1131	(ABC) transporter
AB684_RS01610	COG0583	DNA-binding transcription factor activity
AB684_RS01615	COG1942	4-Oxalocrotonate Tautomerase
AB684_RS01620	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS01635	COG1288	antiporter activity
AB684_RS01645	COG0456	acetyltransferase
AB684_RS01655	COG1164	Oligoendopeptidase f
AB684_RS01660	COG2261	transglycosylase associated protein
AB684_RS01670	COG0247	lactate metabolic process
AB684_RS01675	COG0277	FAD linked oxidase domain protein
AB684_RS01680	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_RS01685	COG1447	Phosphotransferase system cellobiose-specific component IIA
AB684_RS01690	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_RS01695	COG1486	melibiose metabolic process
AB684_RS01700	COG2188	Transcriptional regulator
AB684_RS01705	COG3394	polysaccharide catabolic process
AB684_RS01720	COG3591	Belongs to the peptidase S1B family
AB684_RS01725	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS01735	COG1595	DNA-templated transcription, initiation
AB684_RS01745	COG3773	Cell wall hydrolase
AB684_RS01750	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AB684_RS01755	COG3883	PFAM NLP P60 protein
AB684_RS01755	COG0791	NLP P60 protein
AB684_RS01765	COG1131	(ABC) transporter
AB684_RS01770	COG1309	transcriptional regulator
AB684_RS01790	COG2310	stress, protein
AB684_RS01795	COG2310	stress, protein
AB684_RS01800	COG2310	stress, protein
AB684_RS01805	COG0861	Integral membrane protein TerC family
AB684_RS01825	COG3853	Toxic anion resistance protein (TelA)
AB684_RS01830	COG0785	Cytochrome C biogenesis protein
AB684_RS01840	COG0789	Transcriptional regulator
AB684_RS01845	COG2223	nitrite transmembrane transporter activity
AB684_RS01850	COG0039	L-malate dehydrogenase activity
AB684_RS01855	COG1620	l-lactate permease
AB684_RS01860	COG1280	lysine exporter protein (LysE YggA)
AB684_RS01865	COG1113	amino acid transport
AB684_RS01870	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AB684_RS01875	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AB684_RS01880	COG3541	Predicted nucleotidyltransferase
AB684_RS01885	COG0506	proline dehydrogenase activity
AB684_RS01890	COG1012	belongs to the aldehyde dehydrogenase family
AB684_RS01895	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_RS01900	COG2508	Transcriptional regulator
AB684_RS01905	COG3689	TIGRFAM TIGR03943 family protein
AB684_RS01910	COG0701	Predicted permease
AB684_RS01915	COG3458	cephalosporin-C deacetylase activity
AB684_RS01935	COG0765	amino acid transport
AB684_RS01940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AB684_RS01945	COG2249	NAD(P)H dehydrogenase (quinone) activity
AB684_RS01955	COG2723	6-phospho-beta-galactosidase activity
AB684_RS01965	COG3209	COG3209 Rhs family protein
AB684_RS01970	COG3266	domain, Protein
AB684_RS01970	COG0515	serine threonine protein kinase
AB684_RS01980	COG5444	nuclease activity
AB684_RS02005	COG1176	ABC-type spermidine putrescine transport system, permease component I
AB684_RS02010	COG1177	transmembrane transport
AB684_RS02015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AB684_RS02020	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AB684_RS02025	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AB684_RS02030	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
AB684_RS02035	COG0697	spore germination
AB684_RS02040	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AB684_RS02050	COG2819	hydrolase of the alpha beta superfamily
AB684_RS02055	COG3708	Transcriptional regulator
AB684_RS02055	COG2207	Transcriptional regulator
AB684_RS02060	COG2364	Membrane
AB684_RS02070	COG1131	(ABC) transporter
AB684_RS02095	COG1126	abc transporter atp-binding protein
AB684_RS02100	COG0765	amino acid transport
AB684_RS02105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AB684_RS02110	COG3829	transcription factor binding
AB684_RS02115	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AB684_RS02120	COG0833	amino acid
AB684_RS02125	COG0010	Belongs to the arginase family
AB684_RS02130	COG0583	DNA-binding transcription factor activity
AB684_RS02135	COG0163	prenyltransferase activity
AB684_RS02140	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AB684_RS02190	COG5444	nuclease activity
AB684_RS02210	COG2972	Histidine kinase
AB684_RS02215	COG2207	Transcriptional regulator
AB684_RS02215	COG4753	response regulator
AB684_RS02220	COG4213	ABC transporter substrate-binding protein
AB684_RS02230	COG4214	carbohydrate transport
AB684_RS02235	COG2271	Major facilitator Superfamily
AB684_RS02240	COG1846	Transcriptional regulator
AB684_RS02240	COG0456	acetyltransferase
AB684_RS02250	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
AB684_RS02255	COG3104	oligopeptide transport
AB684_RS02260	COG5434	Belongs to the glycosyl hydrolase 28 family
AB684_RS02270	COG0697	spore germination
AB684_RS02280	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AB684_RS02285	COG0789	Transcriptional regulator
AB684_RS02290	COG1136	(ABC) transporter
AB684_RS02295	COG0577	efflux transmembrane transporter activity
AB684_RS02300	COG0745	RESPONSE REGULATOR receiver
AB684_RS02305	COG5002	protein histidine kinase activity
AB684_RS02305	COG3850	Histidine kinase
AB684_RS02310	COG0840	transmembrane signaling receptor activity
AB684_RS02315	COG0527	aspartate kinase activity
AB684_RS02320	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_RS02325	COG4605	iron ion homeostasis
AB684_RS02330	COG4604	ABC transporter, ATP-binding protein
AB684_RS02335	COG4607	ABC-type enterochelin transport system periplasmic component
AB684_RS02340	COG2814	Major facilitator Superfamily
AB684_RS02345	COG1309	transcriptional regulator
AB684_RS02355	COG0778	Nitroreductase
AB684_RS02360	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AB684_RS02365	COG0640	Transcriptional regulator
AB684_RS02370	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AB684_RS02375	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AB684_RS02380	COG0531	amino acid
AB684_RS02385	COG1012	belongs to the aldehyde dehydrogenase family
AB684_RS02390	COG0697	spore germination
AB684_RS02400	COG4549	nuclear export factor GLE1
AB684_RS02405	COG2372	response to copper ion
AB684_RS02405	COG1276	copper resistance
AB684_RS02410	COG1349	DNA-binding transcription factor activity
AB684_RS02415	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AB684_RS02420	COG0243	molybdopterin cofactor binding
AB684_RS02425	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AB684_RS02430	COG2146	nitrite reductase [NAD(P)H] activity
AB684_RS02435	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AB684_RS02435	COG1587	Uroporphyrinogen-III synthase
AB684_RS02440	COG1802	Transcriptional regulator
AB684_RS02445	COG0471	metal ion transport
AB684_RS02450	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AB684_RS02455	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AB684_RS02470	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_RS02485	COG3959	Transketolase, thiamine diphosphate binding domain
AB684_RS02490	COG3958	Transketolase
AB684_RS02495	COG0561	phosphatase activity
AB684_RS02500	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AB684_RS02505	COG1914	H( )-stimulated, divalent metal cation uptake system
AB684_RS02510	COG4336	lyase activity
AB684_RS02515	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AB684_RS02520	COG1984	allophanate hydrolase subunit 2
AB684_RS02525	COG1414	Transcriptional regulator
AB684_RS02530	COG2755	lipolytic protein G-D-S-L family
AB684_RS02535	COG2213	PTS system mannitol-specific
AB684_RS02540	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_RS02545	COG0246	Mannitol dehydrogenase
AB684_RS02550	COG3711	transcriptional antiterminator
AB684_RS02555	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS02560	COG1917	Cupin 2, conserved barrel domain protein
AB684_RS02570	COG3871	stress protein (general stress protein 26)
AB684_RS02585	COG2814	Major facilitator Superfamily
AB684_RS02595	COG1522	sequence-specific DNA binding
AB684_RS02600	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AB684_RS02600	COG0551	DNA topoisomerase type I activity
AB684_RS02605	COG0531	amino acid
AB684_RS02610	COG0028	Belongs to the TPP enzyme family
AB684_RS02615	COG3397	chitin binding
AB684_RS02625	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_RS02630	COG1914	H( )-stimulated, divalent metal cation uptake system
AB684_RS02635	COG2261	transglycosylase associated protein
AB684_RS02640	COG1027	Aspartate ammonia-lyase
AB684_RS02645	COG1819	glycosyl
AB684_RS02650	COG4876	unkown
AB684_RS02655	COG2217	Heavy metal translocating P-type atpase
AB684_RS02665	COG0662	Cupin 2, conserved barrel domain protein
AB684_RS02670	COG3729	General stress protein
AB684_RS02675	COG0628	permease
AB684_RS02680	COG1301	dicarboxylic acid transport
AB684_RS02685	COG1131	(ABC) transporter
AB684_RS02690	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AB684_RS02700	COG1960	acyl-CoA dehydrogenase activity
AB684_RS02715	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS02720	COG1181	Belongs to the D-alanine--D-alanine ligase family
AB684_RS02725	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AB684_RS02735	COG0513	Belongs to the DEAD box helicase family
AB684_RS02740	COG3402	PFAM membrane-flanked domain
AB684_RS02745	COG3428	Bacterial PH domain
AB684_RS02750	COG0705	Rhomboid family
AB684_RS02755	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AB684_RS02760	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AB684_RS02765	COG0864	Transcriptional regulator
AB684_RS02770	COG2337	Toxic component of a toxin-antitoxin (TA) module
AB684_RS02775	COG1366	Belongs to the anti-sigma-factor antagonist family
AB684_RS02780	COG1366	Belongs to the anti-sigma-factor antagonist family
AB684_RS02785	COG2172	sigma factor antagonist activity
AB684_RS02790	COG2208	phosphoserine phosphatase activity
AB684_RS02800	COG2172	sigma factor antagonist activity
AB684_RS02805	COG1191	sigma factor activity
AB684_RS02810	COG2208	phosphoserine phosphatase activity
AB684_RS02815	COG2183	response to ionizing radiation
AB684_RS02820	COG1309	transcriptional regulator
AB684_RS02825	COG1033	growth of symbiont in host cell
AB684_RS02825	COG2409	Drug exporters of the RND superfamily
AB684_RS02830	COG3091	SprT-like family
AB684_RS02880	COG1476	TRANSCRIPTIONal
AB684_RS02885	COG3239	Fatty acid desaturase
AB684_RS02890	COG1278	Cold shock
AB684_RS02905	COG2364	Membrane
AB684_RS02910	COG1846	Transcriptional regulator
AB684_RS02915	COG0456	acetyltransferase
AB684_RS02920	COG2808	Putative FMN-binding domain
AB684_RS02930	COG1733	regulation of RNA biosynthetic process
AB684_RS02935	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_RS02945	COG0583	DNA-binding transcription factor activity
AB684_RS02960	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
AB684_RS02965	COG1113	amino acid transport
AB684_RS02980	COG1595	DNA-templated transcription, initiation
AB684_RS02990	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AB684_RS02990	COG2755	lipolytic protein G-D-S-L family
AB684_RS02995	COG2814	Major facilitator Superfamily
AB684_RS03005	COG3279	Response regulator of the LytR AlgR family
AB684_RS03015	COG3764	Sortase (surface protein transpeptidase)
AB684_RS03020	COG2814	Major facilitator Superfamily
AB684_RS03060	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AB684_RS03065	COG0802	atpase or kinase
AB684_RS03070	COG1214	PFAM Peptidase M22, glycoprotease
AB684_RS03075	COG0456	acetyltransferase
AB684_RS03080	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AB684_RS03085	COG0488	(ABC) transporter
AB684_RS03090	COG0315	cyclic pyranopterin monophosphate synthase activity
AB684_RS03095	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AB684_RS03100	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AB684_RS03105	COG0805	protein transport
AB684_RS03115	COG1266	CAAX protease self-immunity
AB684_RS03120	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AB684_RS03125	COG0459	protein refolding
AB684_RS03155	COG2720	vancomycin resistance protein
AB684_RS03170	COG2135	peptidase activity
AB684_RS03180	COG1309	transcriptional regulator
AB684_RS03185	COG3848	Pyruvate phosphate dikinase
AB684_RS03185	COG0574	Belongs to the PEP-utilizing enzyme family
AB684_RS03195	COG3189	MarR family transcriptional regulator
AB684_RS03200	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
AB684_RS03205	COG2272	Belongs to the type-B carboxylesterase lipase family
AB684_RS03210	COG2814	Major facilitator Superfamily
AB684_RS03215	COG1842	Phage shock protein A
AB684_RS03220	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AB684_RS03225	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AB684_RS03230	COG4260	virion core protein, lumpy skin disease virus
AB684_RS03240	COG1378	Sugar-specific transcriptional regulator TrmB
AB684_RS03245	COG1280	lysine exporter protein (LysE YggA)
AB684_RS03250	COG3339	Conserved Protein
AB684_RS03255	COG0772	Belongs to the SEDS family
AB684_RS03285	COG0726	polysaccharide deacetylase
AB684_RS03295	COG1609	Transcriptional regulator
AB684_RS03300	COG0366	Alpha amylase catalytic
AB684_RS03305	COG2182	Extracellular solute-binding protein
AB684_RS03310	COG1175	transmembrane transport
AB684_RS03315	COG3833	ABC-type maltose transport systems, permease component
AB684_RS03320	COG5521	maltodextrose utilization protein MalA
AB684_RS03325	COG1554	hydrolase, family 65, central catalytic
AB684_RS03330	COG0366	Alpha amylase catalytic
AB684_RS03335	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AB684_RS03340	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AB684_RS03345	COG1846	Transcriptional regulator
AB684_RS03360	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AB684_RS03365	COG0823	Involved in the tonB-independent uptake of proteins
AB684_RS03395	COG2801	Transposase and inactivated derivatives
AB684_RS03405	COG0702	epimerase
AB684_RS03415	COG2132	Multicopper oxidase
AB684_RS03430	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AB684_RS03435	COG0714	Associated with various cellular activities
AB684_RS03440	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
AB684_RS03445	COG1305	Transglutaminase-like
AB684_RS03450	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AB684_RS03450	COG0519	Catalyzes the synthesis of GMP from XMP
AB684_RS03455	COG2252	PERMEase
AB684_RS03470	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
AB684_RS03480	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AB684_RS03485	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AB684_RS03490	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AB684_RS03495	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AB684_RS03500	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AB684_RS03505	COG0047	phosphoribosylformylglycinamidine synthase activity
AB684_RS03510	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AB684_RS03515	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AB684_RS03520	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AB684_RS03525	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AB684_RS03530	COG0138	bifunctional purine biosynthesis protein purh
AB684_RS03535	COG0151	Belongs to the GarS family
AB684_RS03550	COG2124	cytochrome p450
AB684_RS03570	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AB684_RS03575	COG1470	cell adhesion involved in biofilm formation
AB684_RS03580	COG4496	protein, YerC YecD
AB684_RS03585	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
AB684_RS03590	COG0210	DNA helicase
AB684_RS03595	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AB684_RS03600	COG4851	CamS sex pheromone cAM373 precursor
AB684_RS03610	COG2188	Transcriptional regulator
AB684_RS03630	COG1735	metal-dependent hydrolase with the TIM-barrel fold
AB684_RS03635	COG0626	cystathionine gamma-synthase activity
AB684_RS03640	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AB684_RS03645	COG3457	Alanine racemase
AB684_RS03650	COG0363	glucosamine-6-phosphate deaminase activity
AB684_RS03655	COG1285	pathogenesis
AB684_RS03660	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_RS03665	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AB684_RS03670	COG0154	amidase activity
AB684_RS03675	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AB684_RS03690	COG4124	Belongs to the glycosyl hydrolase 26 family
AB684_RS03695	COG1309	transcriptional regulator
AB684_RS03700	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AB684_RS03710	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_RS03715	COG1957	nucleoside hydrolase
AB684_RS03720	COG1597	lipid kinase activity
AB684_RS03725	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AB684_RS03735	COG2190	(PTS) system
AB684_RS03735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS03735	COG1263	PTS System
AB684_RS03740	COG2723	6-phospho-beta-galactosidase activity
AB684_RS03745	COG3711	transcriptional antiterminator
AB684_RS03750	COG0457	Tetratricopeptide repeat
AB684_RS03770	COG0217	transcriptional regulatory protein
AB684_RS03785	COG1012	belongs to the aldehyde dehydrogenase family
AB684_RS03790	COG0840	transmembrane signaling receptor activity
AB684_RS03795	COG0471	metal ion transport
AB684_RS03800	COG0488	(ABC) transporter
AB684_RS03805	COG1469	GTP cyclohydrolase I activity
AB684_RS03820	COG0523	cobalamin synthesis protein
AB684_RS03825	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
AB684_RS03830	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AB684_RS03835	COG0156	8-amino-7-oxononanoate synthase activity
AB684_RS03840	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AB684_RS03845	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AB684_RS03850	COG2124	cytochrome p450
AB684_RS03860	COG0789	Transcriptional regulator
AB684_RS03865	COG2814	Major facilitator Superfamily
AB684_RS03870	COG0488	(ABC) transporter
AB684_RS03875	COG0513	Belongs to the DEAD box helicase family
AB684_RS03880	COG2130	NADP-dependent
AB684_RS03895	COG0471	metal ion transport
AB684_RS03915	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_RS03925	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
AB684_RS03930	COG5658	integral membrane protein
AB684_RS03935	COG0640	Transcriptional regulator
AB684_RS03940	COG1254	Belongs to the acylphosphatase family
AB684_RS03945	COG2258	MOSC domain
AB684_RS03950	COG0024	Methionine aminopeptidase
AB684_RS03955	COG1368	sulfuric ester hydrolase activity
AB684_RS03965	COG1115	amino acid carrier protein
AB684_RS03970	COG1263	PTS System
AB684_RS03970	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS03975	COG0366	Alpha amylase catalytic
AB684_RS03980	COG2188	Transcriptional regulator
AB684_RS04005	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AB684_RS04010	COG1045	serine acetyltransferase
AB684_RS04015	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AB684_RS04025	COG1215	transferase activity, transferring glycosyl groups
AB684_RS04030	COG0463	Glycosyl transferase, family 2
AB684_RS04030	COG0457	Tetratricopeptide repeat
AB684_RS04040	COG0673	inositol 2-dehydrogenase activity
AB684_RS04050	COG0657	acetylesterase activity
AB684_RS04055	COG1733	regulation of RNA biosynthetic process
AB684_RS04060	COG0778	Nitroreductase
AB684_RS04065	COG0737	Belongs to the 5'-nucleotidase family
AB684_RS04070	COG0693	protein deglycase activity
AB684_RS04075	COG4840	Belongs to the UPF0435 family
AB684_RS04080	COG1115	amino acid carrier protein
AB684_RS04085	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AB684_RS04090	COG4980	gas vesicle protein
AB684_RS04095	COG1295	ribonuclease BN
AB684_RS04100	COG0477	Major facilitator Superfamily
AB684_RS04110	COG0387	Pfam Sodium calcium exchanger
AB684_RS04120	COG0535	radical SAM domain protein
AB684_RS04130	COG0726	polysaccharide deacetylase
AB684_RS04135	COG0371	Dehydrogenase
AB684_RS04145	COG0598	Magnesium transport protein CorA
AB684_RS04150	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AB684_RS04155	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AB684_RS04160	COG4637	Psort location Cytoplasmic, score
AB684_RS04185	COG1819	glycosyl
AB684_RS04195	COG0477	Major facilitator Superfamily
AB684_RS04200	COG1263	PTS System
AB684_RS04200	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS04205	COG3711	transcriptional antiterminator
AB684_RS04210	COG0288	reversible hydration of carbon dioxide
AB684_RS04215	COG3002	Belongs to the UPF0753 family
AB684_RS04220	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AB684_RS04225	COG5609	conserved protein (DUF2294)
AB684_RS04235	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AB684_RS04240	COG0022	dehydrogenase e1 component
AB684_RS04245	COG0508	dehydrogenase complex catalyzes the overall conversion of
AB684_RS04250	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AB684_RS04255	COG3284	Transcriptional regulator
AB684_RS04260	COG1742	UPF0060 membrane protein
AB684_RS04265	COG1486	melibiose metabolic process
AB684_RS04270	COG1737	Transcriptional regulator
AB684_RS04275	COG1263	PTS System
AB684_RS04275	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS04290	COG1733	regulation of RNA biosynthetic process
AB684_RS04295	COG2259	Doxx family
AB684_RS04300	COG2514	catechol 2,3-dioxygenase activity
AB684_RS04310	COG3507	Belongs to the glycosyl hydrolase 43 family
AB684_RS04315	COG2207	Transcriptional regulator
AB684_RS04315	COG1917	Cupin 2, conserved barrel domain protein
AB684_RS04320	COG1653	transport
AB684_RS04325	COG2249	NAD(P)H dehydrogenase (quinone) activity
AB684_RS04330	COG1051	belongs to the nudix hydrolase family
AB684_RS04340	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AB684_RS04340	COG0392	lysyltransferase activity
AB684_RS04345	COG0384	phenazine biosynthesis protein PhzF
AB684_RS04350	COG0778	Nitroreductase
AB684_RS04365	COG1090	epimerase
AB684_RS04370	COG2137	regulation of response to DNA damage stimulus
AB684_RS04395	COG0463	Glycosyl transferase, family 2
AB684_RS04405	COG4485	Bacterial membrane protein, YfhO
AB684_RS04410	COG1988	membrane-bound metal-dependent
AB684_RS04415	COG1194	a g-specific adenine glycosylase
AB684_RS04425	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS04440	COG3557	Belongs to the UPF0374 family
AB684_RS04445	COG1132	(ABC) transporter
AB684_RS04450	COG0444	Belongs to the ABC transporter superfamily
AB684_RS04455	COG4608	Belongs to the ABC transporter superfamily
AB684_RS04460	COG0747	negative chemotaxis
AB684_RS04465	COG0601	transmembrane transport
AB684_RS04470	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AB684_RS04475	COG4129	membrane
AB684_RS04480	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AB684_RS04485	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AB684_RS04490	COG0735	belongs to the Fur family
AB684_RS04600	COG4974	Belongs to the 'phage' integrase family
AB684_RS04610	COG0582	viral genome integration into host DNA
AB684_RS04730	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AB684_RS04740	COG0710	3-dehydroquinate dehydratase activity
AB684_RS04745	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AB684_RS04750	COG1116	anion transmembrane transporter activity
AB684_RS04755	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AB684_RS04760	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AB684_RS04765	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AB684_RS04775	COG1476	TRANSCRIPTIONal
AB684_RS04785	COG1131	(ABC) transporter
AB684_RS04805	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AB684_RS04815	COG3382	B3 4 domain protein
AB684_RS04820	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AB684_RS04830	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AB684_RS04835	COG0789	Transcriptional regulator
AB684_RS04840	COG1664	Polymer-forming cytoskeletal
AB684_RS04850	COG2766	serine protein kinase
AB684_RS04855	COG2718	Belongs to the UPF0229 family
AB684_RS04860	COG1566	PFAM secretion protein HlyD family protein
AB684_RS04865	COG2814	Major facilitator Superfamily
AB684_RS04870	COG0655	NAD(P)H dehydrogenase (quinone) activity
AB684_RS04890	COG1131	(ABC) transporter
AB684_RS04895	COG1131	(ABC) transporter
AB684_RS04900	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AB684_RS04905	COG1278	Cold shock
AB684_RS04910	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AB684_RS04915	COG2011	ABC-type metal ion transport system permease component
AB684_RS04920	COG1464	Belongs to the NlpA lipoprotein family
AB684_RS04925	COG1823	symporter activity
AB684_RS04950	COG5577	PFAM Coat F domain
AB684_RS04955	COG5002	protein histidine kinase activity
AB684_RS04960	COG4085	toxin activity
AB684_RS04960	COG1525	nuclease
AB684_RS04960	COG0737	Belongs to the 5'-nucleotidase family
AB684_RS04965	COG3764	Sortase (surface protein transpeptidase)
AB684_RS04970	COG0564	pseudouridine synthase activity
AB684_RS04980	COG0517	IMP dehydrogenase activity
AB684_RS04985	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AB684_RS04990	COG3153	acetyltransferase
AB684_RS04990	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AB684_RS04995	COG0488	(ABC) transporter
AB684_RS05000	COG2116	formate transmembrane transporter activity
AB684_RS05005	COG0679	Auxin Efflux Carrier
AB684_RS05010	COG0604	alcohol dehydrogenase
AB684_RS05015	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
AB684_RS05020	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AB684_RS05025	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AB684_RS05030	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AB684_RS05035	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AB684_RS05050	COG4585	Histidine kinase
AB684_RS05050	COG2203	Gaf domain
AB684_RS05055	COG2197	response regulator
AB684_RS05060	COG0431	NADPH-dependent FMN reductase
AB684_RS05075	COG1959	2 iron, 2 sulfur cluster binding
AB684_RS05080	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AB684_RS05080	COG1017	nitric oxide dioxygenase activity
AB684_RS05085	COG2719	SpoVR family
AB684_RS05090	COG1388	LysM domain
AB684_RS05090	COG0791	NLP P60 protein
AB684_RS05100	COG0372	Belongs to the citrate synthase family
AB684_RS05105	COG2133	pyrroloquinoline quinone binding
AB684_RS05110	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS05115	COG0733	neurotransmitter:sodium symporter activity
AB684_RS05125	COG3708	Transcriptional regulator
AB684_RS05125	COG2207	Transcriptional regulator
AB684_RS05130	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AB684_RS05150	COG1595	DNA-templated transcription, initiation
AB684_RS05155	COG0662	Cupin 2, conserved barrel domain protein
AB684_RS05165	COG0204	Acyl-transferase
AB684_RS05170	COG3152	Membrane
AB684_RS05180	COG1309	transcriptional regulator
AB684_RS05185	COG1253	flavin adenine dinucleotide binding
AB684_RS05190	COG0789	Transcriptional regulator
AB684_RS05195	COG1253	flavin adenine dinucleotide binding
AB684_RS05215	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AB684_RS05220	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AB684_RS05225	COG0584	glycerophosphoryl diester phosphodiesterase
AB684_RS05230	COG0668	transmembrane transport
AB684_RS05235	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AB684_RS05245	COG0726	polysaccharide deacetylase
AB684_RS05255	COG1757	Na H antiporter
AB684_RS05260	COG2017	converts alpha-aldose to the beta-anomer
AB684_RS05280	COG0589	response to stress
AB684_RS05285	COG1132	(ABC) transporter
AB684_RS05290	COG1132	(ABC) transporter
AB684_RS05295	COG0702	epimerase
AB684_RS05310	COG3842	ATPase activity
AB684_RS05315	COG2508	Transcriptional regulator
AB684_RS05325	COG0189	ligase activity
AB684_RS05330	COG0189	ligase activity
AB684_RS05335	COG4399	Belongs to the UPF0754 family
AB684_RS05340	COG3679	Belongs to the UPF0342 family
AB684_RS05350	COG0561	phosphatase activity
AB684_RS05355	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AB684_RS05360	COG0475	glutathione-regulated potassium exporter activity
AB684_RS05365	COG0490	domain, Protein
AB684_RS05375	COG1024	Enoyl-CoA hydratase
AB684_RS05380	COG0457	Tetratricopeptide repeat
AB684_RS05395	COG4152	abc transporter atp-binding protein
AB684_RS05400	COG1668	transmembrane transport
AB684_RS05405	COG0420	3'-5' exonuclease activity
AB684_RS05415	COG3481	metal-dependent phosphohydrolase, HD sub domain
AB684_RS05425	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AB684_RS05445	COG1846	Transcriptional regulator
AB684_RS05450	COG4980	gas vesicle protein
AB684_RS05465	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AB684_RS05470	COG0537	adenosine 5'-monophosphoramidase activity
AB684_RS05475	COG1131	(ABC) transporter
AB684_RS05480	COG4473	ABC transporter
AB684_RS05490	COG1473	amidohydrolase
AB684_RS05495	COG3069	C4-dicarboxylate transmembrane transporter activity
AB684_RS05500	COG2329	Antibiotic biosynthesis monooxygenase
AB684_RS05505	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AB684_RS05510	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AB684_RS05515	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AB684_RS05520	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
AB684_RS05525	COG1309	transcriptional regulator
AB684_RS05530	COG1511	domain protein
AB684_RS05535	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AB684_RS05540	COG1363	Peptidase, m42
AB684_RS05550	COG1301	dicarboxylic acid transport
AB684_RS05555	COG1234	tRNA 3'-trailer cleavage
AB684_RS05560	COG0095	Lipoate-protein ligase
AB684_RS05565	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_RS05575	COG1396	sequence-specific DNA binding
AB684_RS05590	COG0501	Belongs to the peptidase M48B family
AB684_RS05600	COG0697	spore germination
AB684_RS05605	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
AB684_RS05610	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_RS05615	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_RS05620	COG0406	alpha-ribazole phosphatase activity
AB684_RS05625	COG0840	transmembrane signaling receptor activity
AB684_RS05630	COG0723	plastoquinol--plastocyanin reductase activity
AB684_RS05630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AB684_RS05635	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS05645	COG4903	ComK protein
AB684_RS05655	COG0398	Pfam SNARE associated Golgi protein
AB684_RS05660	COG0681	Belongs to the peptidase S26 family
AB684_RS05665	COG1404	Belongs to the peptidase S8 family
AB684_RS05675	COG2508	Transcriptional regulator
AB684_RS05685	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AB684_RS05690	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AB684_RS05695	COG3257	ureidoglycine aminohydrolase activity
AB684_RS05700	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AB684_RS05705	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AB684_RS05710	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AB684_RS05715	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AB684_RS05725	COG0549	Belongs to the carbamate kinase family
AB684_RS05730	COG2814	Major facilitator Superfamily
AB684_RS05735	COG0457	Tetratricopeptide repeat
AB684_RS05755	COG1609	Transcriptional regulator
AB684_RS05760	COG1653	transport
AB684_RS05765	COG1175	transmembrane transport
AB684_RS05770	COG0395	ABC-type sugar transport system, permease component
AB684_RS05775	COG1486	melibiose metabolic process
AB684_RS05780	COG3180	Ammonia monooxygenase
AB684_RS05795	COG3546	catalase activity
AB684_RS05800	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_RS05805	COG0477	Major facilitator Superfamily
AB684_RS05805	COG2814	Major facilitator Superfamily
AB684_RS05815	COG5002	protein histidine kinase activity
AB684_RS05820	COG0745	RESPONSE REGULATOR receiver
AB684_RS05825	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
AB684_RS05830	COG0725	ABC transporter, periplasmic molybdate-binding protein
AB684_RS05835	COG4149	molybdate abc transporter
AB684_RS05840	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
AB684_RS05845	COG1074	ATP-dependent DNA helicase activity
AB684_RS05850	COG0420	3'-5' exonuclease activity
AB684_RS05855	COG0419	ATPase involved in DNA repair
AB684_RS05900	COG5337	Spore coat protein CotH
AB684_RS05910	COG0179	Fumarylacetoacetate (FAA) hydrolase
AB684_RS05930	COG0367	asparagine synthase
AB684_RS05935	COG0004	ammonium transporteR
AB684_RS05940	COG0347	Belongs to the P(II) protein family
AB684_RS05945	COG0534	Mate efflux family protein
AB684_RS05950	COG1917	Cupin 2, conserved barrel domain protein
AB684_RS05950	COG2207	Transcriptional regulator
AB684_RS05960	COG1609	Transcriptional regulator
AB684_RS05965	COG0673	inositol 2-dehydrogenase activity
AB684_RS05970	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AB684_RS05980	COG0076	glutamate decarboxylase activity
AB684_RS06005	COG2153	protein acetylation
AB684_RS06010	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS06015	COG2378	regulation of single-species biofilm formation
AB684_RS06020	COG0646	methionine synthase
AB684_RS06020	COG1410	methionine synthase
AB684_RS06025	COG0646	methionine synthase
AB684_RS06025	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AB684_RS06030	COG1666	GTP binding
AB684_RS06035	COG2996	Protein conserved in bacteria
AB684_RS06045	COG1307	EDD domain protein, DegV family
AB684_RS06050	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_RS06060	COG0516	GMP reductase activity
AB684_RS06070	COG0561	phosphatase activity
AB684_RS06075	COG1073	alpha beta
AB684_RS06080	COG2151	metal-sulfur cluster biosynthetic enzyme
AB684_RS06090	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AB684_RS06095	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AB684_RS06100	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AB684_RS06105	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AB684_RS06110	COG0505	Belongs to the CarA family
AB684_RS06115	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AB684_RS06120	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AB684_RS06125	COG1968	undecaprenyl-diphosphatase activity
AB684_RS06140	COG2267	carboxylic ester hydrolase activity
AB684_RS06150	COG1744	ABC transporter substrate-binding protein PnrA-like
AB684_RS06165	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AB684_RS06170	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AB684_RS06175	COG5504	Zn-dependent protease
AB684_RS06180	COG0444	Belongs to the ABC transporter superfamily
AB684_RS06185	COG4608	Belongs to the ABC transporter superfamily
AB684_RS06195	COG0601	transmembrane transport
AB684_RS06200	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AB684_RS06225	COG0180	Tryptophanyl-tRNA synthetase
AB684_RS06230	COG4166	transmembrane transport
AB684_RS06235	COG0601	transmembrane transport
AB684_RS06240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AB684_RS06245	COG0444	Belongs to the ABC transporter superfamily
AB684_RS06250	COG4608	Belongs to the ABC transporter superfamily
AB684_RS06255	COG0456	acetyltransferase
AB684_RS06260	COG1393	Belongs to the ArsC family
AB684_RS06265	COG0861	Integral membrane protein TerC family
AB684_RS06270	COG4862	establishment of competence for transformation
AB684_RS06290	COG4565	transcriptional regulatory protein
AB684_RS06295	COG3290	protein histidine kinase activity
AB684_RS06300	COG4469	Competence protein
AB684_RS06305	COG1164	Oligoendopeptidase f
AB684_RS06310	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AB684_RS06315	COG2346	COG2346, Truncated hemoglobins
AB684_RS06320	COG0741	lytic transglycosylase activity
AB684_RS06325	COG4116	CYTH
AB684_RS06335	COG2357	RelA SpoT domain protein
AB684_RS06340	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AB684_RS06345	COG0564	pseudouridine synthase activity
AB684_RS06350	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AB684_RS06360	COG0569	domain protein
AB684_RS06360	COG0475	glutathione-regulated potassium exporter activity
AB684_RS06365	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AB684_RS06370	COG0352	thiamine-phosphate diphosphorylase activity
AB684_RS06380	COG2104	thiamine diphosphate biosynthetic process
AB684_RS06385	COG2022	thiamine diphosphate biosynthetic process
AB684_RS06390	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AB684_RS06395	COG0351	phosphomethylpyrimidine kinase
AB684_RS06400	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AB684_RS06455	COG0210	DNA helicase
AB684_RS06465	COG0586	Pfam SNARE associated Golgi protein
AB684_RS06470	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AB684_RS06475	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AB684_RS06480	COG2246	polysaccharide biosynthetic process
AB684_RS06485	COG2153	protein acetylation
AB684_RS06490	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AB684_RS06495	COG2382	esterase
AB684_RS06515	COG0626	cystathionine gamma-synthase activity
AB684_RS06520	COG0626	cystathionine gamma-synthase activity
AB684_RS06525	COG5505	Protein of unknown function (DUF819)
AB684_RS06540	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AB684_RS06545	COG3507	Belongs to the glycosyl hydrolase 43 family
AB684_RS06565	COG0110	maltose O-acetyltransferase activity
AB684_RS06575	COG0583	DNA-binding transcription factor activity
AB684_RS06580	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AB684_RS06585	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AB684_RS06590	COG2801	Transposase and inactivated derivatives
AB684_RS06600	COG0583	DNA-binding transcription factor activity
AB684_RS06605	COG0697	spore germination
AB684_RS06610	COG0346	lactoylglutathione lyase activity
AB684_RS06620	COG1388	LysM domain
AB684_RS06620	COG3584	3D domain protein
AB684_RS06625	COG2814	Major facilitator Superfamily
AB684_RS06630	COG1309	transcriptional regulator
AB684_RS06650	COG5444	nuclease activity
AB684_RS06655	COG4195	phage-related replication protein
AB684_RS06660	COG2856	Zn peptidase
AB684_RS06665	COG1396	sequence-specific DNA binding
AB684_RS06680	COG1522	sequence-specific DNA binding
AB684_RS06685	COG1484	DNA-dependent DNA replication
AB684_RS06700	COG1595	DNA-templated transcription, initiation
AB684_RS06705	COG3728	DNA packaging
AB684_RS06705	COG5484	DNA packaging
AB684_RS06710	COG1783	phage Terminase large subunit
AB684_RS06715	COG5518	Phage portal protein
AB684_RS06720	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AB684_RS06725	COG4653	Phage capsid family
AB684_RS06770	COG3953	SLT domain
AB684_RS06770	COG5412	phage tail tape measure protein
AB684_RS06775	COG1652	LysM domain
AB684_RS06780	COG4193	domain, Protein
AB684_RS06790	COG3628	GPW Gp25 family protein
AB684_RS06795	COG3299	homolog of phage Mu protein gp47
AB684_RS06800	COG3778	Protein conserved in bacteria
AB684_RS06840	COG1802	Transcriptional regulator
AB684_RS06845	COG1063	alcohol dehydrogenase
AB684_RS06850	COG1312	Catalyzes the dehydration of D-mannonate
AB684_RS06855	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS06860	COG1063	alcohol dehydrogenase
AB684_RS06865	COG2271	Major facilitator Superfamily
AB684_RS06880	COG0306	phosphate transporter
AB684_RS06885	COG1392	Phosphate transport regulator
AB684_RS06890	COG0405	Gamma-glutamyltransferase
AB684_RS06895	COG5578	integral membrane protein
AB684_RS06905	COG4753	response regulator
AB684_RS06905	COG2207	Transcriptional regulator
AB684_RS06910	COG1653	transport
AB684_RS06915	COG1175	transmembrane transport
AB684_RS06920	COG0395	ABC-type sugar transport system, permease component
AB684_RS06925	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AB684_RS06930	COG2207	Transcriptional regulator
AB684_RS06935	COG2755	lipolytic protein G-D-S-L family
AB684_RS06945	COG5578	integral membrane protein
AB684_RS06950	COG3401	FG-GAP repeat protein
AB684_RS06960	COG2755	lipolytic protein G-D-S-L family
AB684_RS06965	COG3401	FG-GAP repeat protein
AB684_RS06970	COG0667	Aldo Keto reductase
AB684_RS06975	COG2755	lipolytic protein G-D-S-L family
AB684_RS06980	COG1874	Beta-galactosidase
AB684_RS06990	COG1653	transport
AB684_RS06995	COG4209	transmembrane transport
AB684_RS07000	COG0395	ABC-type sugar transport system, permease component
AB684_RS07005	COG0531	amino acid
AB684_RS07010	COG0346	lactoylglutathione lyase activity
AB684_RS07020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AB684_RS07025	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AB684_RS07030	COG2362	D-Aminopeptidase
AB684_RS07035	COG0601	transmembrane transport
AB684_RS07040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AB684_RS07045	COG0444	Belongs to the ABC transporter superfamily
AB684_RS07050	COG4166	transmembrane transport
AB684_RS07055	COG1619	proteins homologs of microcin C7 resistance protein MccF
AB684_RS07060	COG4948	Mandelate Racemase Muconate Lactonizing
AB684_RS07065	COG0791	NLP P60 protein
AB684_RS07070	COG4608	Belongs to the ABC transporter superfamily
AB684_RS07075	COG1834	amidinotransferase
AB684_RS07080	COG1607	acyl-coa hydrolase
AB684_RS07090	COG3866	Pectate lyase
AB684_RS07110	COG2318	DinB family
AB684_RS07115	COG2076	Multidrug Resistance protein
AB684_RS07120	COG2076	Multidrug Resistance protein
AB684_RS07125	COG0788	formyltetrahydrofolate deformylase activity
AB684_RS07130	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AB684_RS07135	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AB684_RS07140	COG1764	response to oxidative stress
AB684_RS07145	COG1846	Transcriptional regulator
AB684_RS07150	COG1764	response to oxidative stress
AB684_RS07160	COG0590	tRNA wobble adenosine to inosine editing
AB684_RS07165	COG0406	alpha-ribazole phosphatase activity
AB684_RS07180	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AB684_RS07185	COG1404	Belongs to the peptidase S8 family
AB684_RS07190	COG2239	Acts as a magnesium transporter
AB684_RS07200	COG0789	Transcriptional regulator
AB684_RS07210	COG1846	Transcriptional regulator
AB684_RS07215	COG1793	dna ligase
AB684_RS07215	COG3285	dna ligase
AB684_RS07220	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AB684_RS07225	COG5001	Diguanylate cyclase
AB684_RS07225	COG3300	MHYT domain
AB684_RS07230	COG0586	Pfam SNARE associated Golgi protein
AB684_RS07235	COG0861	Integral membrane protein TerC family
AB684_RS07240	COG1191	sigma factor activity
AB684_RS07260	COG0501	Belongs to the peptidase M48B family
AB684_RS07265	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AB684_RS07270	COG0768	penicillin binding
AB684_RS07285	COG3594	Acyltransferase
AB684_RS07290	COG5002	protein histidine kinase activity
AB684_RS07295	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AB684_RS07300	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
AB684_RS07305	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
AB684_RS07310	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AB684_RS07315	COG0436	Aminotransferase
AB684_RS07320	COG1850	ribulose-bisphosphate carboxylase activity
AB684_RS07325	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
AB684_RS07325	COG0235	Class ii aldolase
AB684_RS07330	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
AB684_RS07335	COG0346	lactoylglutathione lyase activity
AB684_RS07340	COG3339	Conserved Protein
AB684_RS07350	COG3852	Histidine kinase
AB684_RS07355	COG1846	Transcriptional regulator
AB684_RS07360	COG1360	Flagellar Motor Protein
AB684_RS07365	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AB684_RS07370	COG0542	response to heat
AB684_RS07375	COG3949	Membrane
AB684_RS07380	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AB684_RS07385	COG0720	synthase
AB684_RS07390	COG0602	queuosine metabolic process
AB684_RS07395	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AB684_RS07405	COG0457	Tetratricopeptide repeat
AB684_RS07410	COG0457	Tetratricopeptide repeat
AB684_RS07415	COG3739	integral membrane protein
AB684_RS07420	COG3655	Transcriptional regulator
AB684_RS07450	COG4873	Protein conserved in bacteria
AB684_RS07460	COG3773	Cell wall hydrolase
AB684_RS07465	COG2244	polysaccharide biosynthetic process
AB684_RS07470	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS07475	COG2217	Heavy metal translocating P-type atpase
AB684_RS07480	COG0006	proline dipeptidase activity
AB684_RS07490	COG1609	Transcriptional regulator
AB684_RS07495	COG3711	transcriptional antiterminator
AB684_RS07500	COG2190	(PTS) system
AB684_RS07500	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS07500	COG1263	PTS System
AB684_RS07505	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_RS07510	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AB684_RS07520	COG1533	DNA photolyase activity
AB684_RS07525	COG0456	acetyltransferase
AB684_RS07530	COG0840	transmembrane signaling receptor activity
AB684_RS07535	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS07540	COG2084	Dehydrogenase
AB684_RS07545	COG2340	Cysteine-rich secretory protein family
AB684_RS07550	COG0768	penicillin binding
AB684_RS07555	COG4191	Histidine kinase
AB684_RS07560	COG0436	Aminotransferase
AB684_RS07565	COG1714	RDD family
AB684_RS07575	COG0835	chemotaxis
AB684_RS07575	COG0784	Response regulator, receiver
AB684_RS07585	COG2814	Major facilitator Superfamily
AB684_RS07590	COG1376	ErfK ybiS ycfS ynhG family protein
AB684_RS07595	COG1408	metallophosphoesterase
AB684_RS07600	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS07605	COG2200	EAL domain
AB684_RS07615	COG4703	Protein of unknown function (DUF1797)
AB684_RS07620	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
AB684_RS07630	COG0517	IMP dehydrogenase activity
AB684_RS07635	COG0583	DNA-binding transcription factor activity
AB684_RS07640	COG0716	FMN binding
AB684_RS07650	COG0716	FMN binding
AB684_RS07655	COG2171	N-acyltransferase activity
AB684_RS07660	COG1473	amidohydrolase
AB684_RS07670	COG0450	alkyl hydroperoxide reductase
AB684_RS07675	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS07690	COG0746	molybdenum cofactor guanylyltransferase activity
AB684_RS07695	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AB684_RS07700	COG0303	'Molybdopterin
AB684_RS07705	COG1763	Mo-molybdopterin cofactor biosynthetic process
AB684_RS07710	COG0314	molybdopterin synthase activity
AB684_RS07715	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AB684_RS07725	COG1132	(ABC) transporter
AB684_RS07730	COG1132	(ABC) transporter
AB684_RS07740	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AB684_RS07745	COG1136	(ABC) transporter
AB684_RS07750	COG0577	efflux transmembrane transporter activity
AB684_RS07755	COG1349	DNA-binding transcription factor activity
AB684_RS07760	COG1105	Belongs to the carbohydrate kinase PfkB family
AB684_RS07765	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_RS07765	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_RS07765	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_RS07785	COG0488	(ABC) transporter
AB684_RS07795	COG2309	aminopeptidase activity
AB684_RS07800	COG1077	Cell shape determining protein MreB Mrl
AB684_RS07805	COG2002	toxin-antitoxin pair type II binding
AB684_RS07810	COG3852	Histidine kinase
AB684_RS07815	COG0569	domain protein
AB684_RS07820	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AB684_RS07825	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AB684_RS07830	COG5503	Protein of unknown function (DUF1447)
AB684_RS07835	COG0561	phosphatase activity
AB684_RS07845	COG0242	peptide deformylase activity
AB684_RS07855	COG0497	DNA recombination
AB684_RS07860	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AB684_RS07865	COG0022	dehydrogenase e1 component
AB684_RS07870	COG0508	dehydrogenase complex catalyzes the overall conversion of
AB684_RS07875	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AB684_RS07880	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS07885	COG1982	Orn Lys Arg decarboxylase major
AB684_RS07890	COG4476	Belongs to the UPF0223 family
AB684_RS07895	COG4493	Belongs to the UPF0637 family
AB684_RS07905	COG0483	inositol monophosphate 1-phosphatase activity
AB684_RS07925	COG1595	DNA-templated transcription, initiation
AB684_RS07940	COG1217	gtp-binding protein TYPA
AB684_RS07950	COG1846	Transcriptional regulator
AB684_RS07955	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AB684_RS07960	COG4896	Protein conserved in bacteria
AB684_RS07970	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AB684_RS07975	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AB684_RS07980	COG2066	Belongs to the glutaminase family
AB684_RS07985	COG4838	Belongs to the UPF0358 family
AB684_RS07990	COG0772	Belongs to the SEDS family
AB684_RS07995	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AB684_RS08000	COG1612	heme a metabolic process
AB684_RS08005	COG0109	protoheme IX farnesyltransferase activity
AB684_RS08010	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AB684_RS08010	COG2010	Cytochrome c
AB684_RS08015	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AB684_RS08020	COG1845	cytochrome c oxidase, subunit III
AB684_RS08025	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AB684_RS08030	COG3336	cytochrome c oxidase
AB684_RS08040	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
AB684_RS08045	COG2340	Cysteine-rich secretory protein family
AB684_RS08060	COG3679	Belongs to the UPF0342 family
AB684_RS08065	COG4471	UPF0298 protein
AB684_RS08070	COG0742	ribosomal rna small subunit methyltransferase
AB684_RS08075	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AB684_RS08080	COG3314	Sporulation integral membrane protein YlbJ
AB684_RS08085	COG3480	Lon protease (S16) C-terminal proteolytic domain
AB684_RS08090	COG1323	Belongs to the UPF0348 family
AB684_RS08095	COG1399	metal-binding, possibly nucleic acid-binding protein
AB684_RS08105	COG0454	-acetyltransferase
AB684_RS08110	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AB684_RS08115	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
AB684_RS08120	COG2001	Belongs to the MraZ family
AB684_RS08125	COG0275	rRNA processing
AB684_RS08130	COG4839	cell division protein FtsL
AB684_RS08135	COG0768	penicillin binding
AB684_RS08140	COG0768	penicillin binding
AB684_RS08145	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AB684_RS08150	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AB684_RS08155	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AB684_RS08160	COG0772	Belongs to the SEDS family
AB684_RS08165	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AB684_RS08170	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AB684_RS08175	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AB684_RS08180	COG3879	Bacterial protein of unknown function (DUF881)
AB684_RS08185	COG3879	Bacterial protein of unknown function (DUF881)
AB684_RS08190	COG3856	small basic protein
AB684_RS08195	COG0849	cell division
AB684_RS08200	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AB684_RS08205	COG4412	M6 family metalloprotease domain protein
AB684_RS08205	COG1404	Belongs to the peptidase S8 family
AB684_RS08210	COG1404	Belongs to the peptidase S8 family
AB684_RS08210	COG4412	M6 family metalloprotease domain protein
AB684_RS08220	COG1191	sigma factor activity
AB684_RS08225	COG1191	sigma factor activity
AB684_RS08230	COG1119	ATPase activity
AB684_RS08235	COG0500	methyltransferase
AB684_RS08240	COG1873	PFAM PRC-barrel domain
AB684_RS08245	COG1496	oxidoreductase activity
AB684_RS08250	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AB684_RS08255	COG1799	cell septum assembly
AB684_RS08260	COG0762	integral membrane protein
AB684_RS08265	COG2302	S4 RNA-binding domain
AB684_RS08270	COG3599	regulation of cell shape
AB684_RS08275	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AB684_RS08280	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AB684_RS08285	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AB684_RS08290	COG0564	pseudouridine synthase activity
AB684_RS08295	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AB684_RS08300	COG2233	PERMEase
AB684_RS08305	COG0540	Belongs to the ATCase OTCase family
AB684_RS08310	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AB684_RS08315	COG0505	Belongs to the CarA family
AB684_RS08320	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AB684_RS08325	COG0543	2 iron, 2 sulfur cluster binding
AB684_RS08330	COG0167	dihydroorotate dehydrogenase activity
AB684_RS08335	COG0284	orotidine-5'-phosphate decarboxylase activity
AB684_RS08340	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AB684_RS08345	COG0175	sulfate reduction
AB684_RS08350	COG0306	phosphate transporter
AB684_RS08355	COG2046	Belongs to the sulfate adenylyltransferase family
AB684_RS08360	COG0529	Catalyzes the synthesis of activated sulfate
AB684_RS08365	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AB684_RS08370	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
AB684_RS08375	COG1648	precorrin-2 dehydrogenase activity
AB684_RS08385	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AB684_RS08390	COG1561	YicC-like family, N-terminal region
AB684_RS08395	COG2052	Domain of unknown function (DUF370)
AB684_RS08400	COG0194	GDP metabolic process
AB684_RS08405	COG1758	RNA polymerase activity
AB684_RS08410	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AB684_RS08415	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AB684_RS08420	COG0242	peptide deformylase activity
AB684_RS08425	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AB684_RS08430	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AB684_RS08430	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AB684_RS08435	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AB684_RS08440	COG0631	protein serine/threonine phosphatase activity
AB684_RS08445	COG0515	serine threonine protein kinase
AB684_RS08445	COG2815	serine threonine protein kinase
AB684_RS08450	COG1162	GTPase activity
AB684_RS08455	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AB684_RS08460	COG1564	THIamine pyrophosphokinase
AB684_RS08470	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AB684_RS08475	COG1302	Protein conserved in bacteria
AB684_RS08480	COG1461	Dihydroxyacetone kinase
AB684_RS08485	COG1760	l-serine dehydratase
AB684_RS08490	COG1760	l-serine dehydratase
AB684_RS08495	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AB684_RS08500	COG1349	DNA-binding transcription factor activity
AB684_RS08505	COG0416	fatty acid biosynthetic process
AB684_RS08510	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AB684_RS08515	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS08520	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AB684_RS08525	COG0571	ribonuclease III activity
AB684_RS08530	COG1196	nuclear chromosome segregation
AB684_RS08535	COG0552	protein localization to endoplasmic reticulum
AB684_RS08540	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AB684_RS08545	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AB684_RS08550	COG0228	four-way junction DNA binding
AB684_RS08555	COG1837	Belongs to the UPF0109 family
AB684_RS08565	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AB684_RS08570	COG0336	Belongs to the RNA methyltransferase TrmD family
AB684_RS08575	COG0335	large ribosomal subunit rRNA binding
AB684_RS08580	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AB684_RS08585	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AB684_RS08595	COG2257	FlhB HrpN YscU SpaS Family
AB684_RS08600	COG0045	succinate-CoA ligase (ADP-forming) activity
AB684_RS08605	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AB684_RS08610	COG0758	DNA mediated transformation
AB684_RS08615	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AB684_RS08620	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AB684_RS08625	COG4974	Belongs to the 'phage' integrase family
AB684_RS08630	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AB684_RS08635	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AB684_RS08640	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
AB684_RS08645	COG1815	bacterial-type flagellum-dependent cell motility
AB684_RS08650	COG1558	bacterial-type flagellum-dependent cell motility
AB684_RS08655	COG1677	Flagellar hook-basal body complex protein FliE
AB684_RS08660	COG1766	The M ring may be actively involved in energy transduction
AB684_RS08665	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AB684_RS08670	COG1317	bacterial-type flagellum organization
AB684_RS08675	COG1157	protein secretion by the type III secretion system
AB684_RS08680	COG2882	bacterial-type flagellum organization
AB684_RS08690	COG3144	bacterial-type flagellum assembly
AB684_RS08695	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AB684_RS08700	COG4786	Flagellar basal body rod
AB684_RS08705	COG1582	Flagellar protein (FlbD)
AB684_RS08710	COG1580	Controls the rotational direction of flagella during chemotaxis
AB684_RS08715	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AB684_RS08720	COG1776	CheC inhibitor of MCP methylation
AB684_RS08720	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AB684_RS08725	COG2201	protein-glutamate methylesterase activity
AB684_RS08730	COG3190	flagellar
AB684_RS08735	COG1338	Plays a role in the flagellum-specific transport system
AB684_RS08740	COG1987	bacterial-type flagellum assembly
AB684_RS08745	COG1684	flagellar biosynthetic protein fliR
AB684_RS08750	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AB684_RS08755	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AB684_RS08760	COG1419	protein localization to endoplasmic reticulum
AB684_RS08765	COG0455	bacterial-type flagellum organization
AB684_RS08770	COG2201	protein-glutamate methylesterase activity
AB684_RS08775	COG0643	Histidine kinase
AB684_RS08775	COG2198	Histidine kinase
AB684_RS08780	COG0835	chemotaxis
AB684_RS08785	COG1776	CheC inhibitor of MCP methylation
AB684_RS08790	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AB684_RS08795	COG1191	sigma factor activity
AB684_RS08805	COG0052	Belongs to the universal ribosomal protein uS2 family
AB684_RS08810	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AB684_RS08815	COG0528	UMP kinase activity
AB684_RS08820	COG0233	cytoplasmic translational termination
AB684_RS08825	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AB684_RS08830	COG4589	Belongs to the CDS family
AB684_RS08835	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AB684_RS08840	COG0750	zinc metalloprotease
AB684_RS08845	COG0442	prolyl-tRNA aminoacylation
AB684_RS08850	COG2176	DNA-directed DNA polymerase activity
AB684_RS08880	COG0779	Required for maturation of 30S ribosomal subunits
AB684_RS08885	COG0195	Participates in both transcription termination and antitermination
AB684_RS08890	COG2740	Nucleic-acid-binding protein implicated in transcription termination
AB684_RS08895	COG1358	cellular component organization or biogenesis
AB684_RS08900	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AB684_RS08905	COG1550	Protein conserved in bacteria
AB684_RS08910	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AB684_RS08915	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AB684_RS08920	COG0196	riboflavin kinase activity
AB684_RS08925	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AB684_RS08930	COG1185	polyribonucleotide nucleotidyltransferase activity
AB684_RS08935	COG0726	polysaccharide deacetylase
AB684_RS08940	COG0612	Peptidase, M16
AB684_RS08945	COG1873	PFAM PRC-barrel domain
AB684_RS08950	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AB684_RS08955	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AB684_RS08960	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AB684_RS08965	COG0527	aspartate kinase activity
AB684_RS08975	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AB684_RS08980	COG0740	serine-type endopeptidase activity
AB684_RS08990	COG4980	gas vesicle protein
AB684_RS08990	COG1674	ftsk spoiiie
AB684_RS08995	COG2188	Transcriptional regulator
AB684_RS09000	COG2814	Major facilitator Superfamily
AB684_RS09005	COG0612	Peptidase, M16
AB684_RS09010	COG0612	Peptidase, M16
AB684_RS09015	COG0300	oxidoreductase activity
AB684_RS09030	COG1426	Protein conserved in bacteria
AB684_RS09035	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AB684_RS09040	COG1546	Belongs to the CinA family
AB684_RS09040	COG1058	Belongs to the CinA family
AB684_RS09050	COG1418	mRNA catabolic process
AB684_RS09055	COG1692	metallophosphoesterase
AB684_RS09060	COG2359	stage V sporulation protein S
AB684_RS09070	COG1063	alcohol dehydrogenase
AB684_RS09075	COG0156	8-amino-7-oxononanoate synthase activity
AB684_RS09080	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AB684_RS09085	COG4550	Control of competence regulator ComK, YlbF/YmcA
AB684_RS09095	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AB684_RS09100	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AB684_RS09105	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AB684_RS09110	COG5444	nuclease activity
AB684_RS09125	COG0523	cobalamin synthesis protein
AB684_RS09135	COG1247	-acetyltransferase
AB684_RS09145	COG1231	oxidoreductase activity
AB684_RS09150	COG3619	membrane
AB684_RS09155	COG3263	regulation of cellular component size
AB684_RS09170	COG0393	Putative heavy-metal-binding
AB684_RS09175	COG0398	Pfam SNARE associated Golgi protein
AB684_RS09180	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AB684_RS09185	COG1819	glycosyl
AB684_RS09190	COG0531	amino acid
AB684_RS09195	COG5577	PFAM Coat F domain
AB684_RS09205	COG3858	chitin binding
AB684_RS09205	COG1388	LysM domain
AB684_RS09210	COG1309	transcriptional regulator
AB684_RS09215	COG3631	Ketosteroid isomerase-related protein
AB684_RS09220	COG0702	epimerase
AB684_RS09230	COG1764	response to oxidative stress
AB684_RS09235	COG2076	Multidrug Resistance protein
AB684_RS09240	COG2076	Multidrug Resistance protein
AB684_RS09255	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AB684_RS09260	COG1923	regulation of RNA biosynthetic process
AB684_RS09275	COG1780	Probably involved in ribonucleotide reductase function
AB684_RS09280	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AB684_RS09285	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AB684_RS09290	COG4112	unkown
AB684_RS09305	COG0735	belongs to the Fur family
AB684_RS09310	COG1802	Transcriptional regulator
AB684_RS09350	COG1309	transcriptional regulator
AB684_RS09400	COG0464	growth
AB684_RS09405	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AB684_RS09410	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
AB684_RS09415	COG0789	Transcriptional regulator
AB684_RS09420	COG0174	glutamine synthetase
AB684_RS09460	COG1073	alpha beta
AB684_RS09500	COG1309	transcriptional regulator
AB684_RS09505	COG2076	Multidrug Resistance protein
AB684_RS09510	COG2076	Multidrug Resistance protein
AB684_RS09515	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_RS09530	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS09535	COG3546	catalase activity
AB684_RS09560	COG1846	Transcriptional regulator
AB684_RS09565	COG0778	Nitroreductase
AB684_RS09570	COG0346	lactoylglutathione lyase activity
AB684_RS09575	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AB684_RS09580	COG0655	NAD(P)H dehydrogenase (quinone) activity
AB684_RS09600	COG3209	COG3209 Rhs family protein
AB684_RS09605	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AB684_RS09610	COG1388	LysM domain
AB684_RS09615	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AB684_RS09620	COG4224	UPF0291 protein
AB684_RS09625	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AB684_RS09635	COG3763	UPF0154 protein
AB684_RS09645	COG0785	Cytochrome C biogenesis protein
AB684_RS09650	COG2201	protein-glutamate methylesterase activity
AB684_RS09655	COG4846	Membrane protein involved in cytochrome C biogenesis
AB684_RS09665	COG0071	Belongs to the small heat shock protein (HSP20) family
AB684_RS09680	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AB684_RS09685	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS09700	COG0824	Thioesterase
AB684_RS09725	COG4841	protein insertion into membrane
AB684_RS09730	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AB684_RS09735	COG1832	CoA-binding protein
AB684_RS09740	COG0187	DNA topoisomerase II activity
AB684_RS09745	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AB684_RS09750	COG1609	Transcriptional regulator
AB684_RS09765	COG2160	L-arabinose isomerase activity
AB684_RS09785	COG1115	amino acid carrier protein
AB684_RS09795	COG2181	nitrate reductase activity
AB684_RS09800	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AB684_RS09805	COG1140	nitrate reductase beta subunit
AB684_RS09810	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AB684_RS09825	COG0535	radical SAM domain protein
AB684_RS09830	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AB684_RS09840	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AB684_RS09845	COG2223	nitrite transmembrane transporter activity
AB684_RS09865	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
AB684_RS09875	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
AB684_RS09885	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_RS09905	COG3420	alginic acid biosynthetic process
AB684_RS09910	COG1114	Component of the transport system for branched-chain amino acids
AB684_RS09920	COG0789	Transcriptional regulator
AB684_RS09945	COG1024	Enoyl-CoA hydratase
AB684_RS09950	COG1012	belongs to the aldehyde dehydrogenase family
AB684_RS09955	COG2084	Dehydrogenase
AB684_RS09960	COG1960	acyl-CoA dehydrogenase activity
AB684_RS09965	COG1482	cell wall glycoprotein biosynthetic process
AB684_RS09970	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_RS09970	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_RS09970	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_RS09990	COG3711	transcriptional antiterminator
AB684_RS09990	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_RS10005	COG1725	Transcriptional regulator
AB684_RS10010	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS10015	COG1312	Catalyzes the dehydration of D-mannonate
AB684_RS10030	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AB684_RS10040	COG1609	Transcriptional regulator
AB684_RS10045	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AB684_RS10050	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AB684_RS10055	COG0640	Transcriptional regulator
AB684_RS10065	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
AB684_RS10080	COG1649	PFAM Uncharacterised BCR, COG1649
AB684_RS10085	COG2404	hydrolase activity, acting on ester bonds
AB684_RS10090	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AB684_RS10100	COG2027	D-alanyl-D-alanine carboxypeptidase
AB684_RS10105	COG1252	NADH dehydrogenase
AB684_RS10120	COG0166	Belongs to the GPI family
AB684_RS10130	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AB684_RS10135	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AB684_RS10140	COG1024	Enoyl-CoA hydratase
AB684_RS10145	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AB684_RS10150	COG0511	ligase activity, forming carbon-carbon bonds
AB684_RS10155	COG0439	Biotin carboxylase
AB684_RS10160	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_RS10165	COG1960	acyl-CoA dehydrogenase activity
AB684_RS10170	COG2249	NAD(P)H dehydrogenase (quinone) activity
AB684_RS10175	COG1733	regulation of RNA biosynthetic process
AB684_RS10180	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AB684_RS10185	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AB684_RS10195	COG2323	membrane
AB684_RS10205	COG0306	phosphate transporter
AB684_RS10210	COG0175	sulfate reduction
AB684_RS10215	COG1809	phosphosulfolactate synthase activity
AB684_RS10220	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_RS10225	COG4948	Mandelate Racemase Muconate Lactonizing
AB684_RS10230	COG2814	Major facilitator Superfamily
AB684_RS10235	COG0463	Glycosyl transferase, family 2
AB684_RS10250	COG0493	'glutamate synthase
AB684_RS10255	COG0070	glutamate synthase
AB684_RS10255	COG0069	glutamate synthase activity
AB684_RS10255	COG0067	glutamate synthase
AB684_RS10260	COG0583	DNA-binding transcription factor activity
AB684_RS10280	COG1846	Transcriptional regulator
AB684_RS10290	COG1132	(ABC) transporter
AB684_RS10300	COG0300	oxidoreductase activity
AB684_RS10305	COG3848	Pyruvate phosphate dikinase
AB684_RS10305	COG0574	Belongs to the PEP-utilizing enzyme family
AB684_RS10310	COG0477	Major facilitator Superfamily
AB684_RS10315	COG0243	molybdopterin cofactor binding
AB684_RS10320	COG1846	Transcriptional regulator
AB684_RS10325	COG2814	Major facilitator Superfamily
AB684_RS10330	COG0531	amino acid
AB684_RS10340	COG0531	amino acid
AB684_RS10345	COG0531	amino acid
AB684_RS10350	COG0697	spore germination
AB684_RS10355	COG0488	(ABC) transporter
AB684_RS10360	COG0840	transmembrane signaling receptor activity
AB684_RS10365	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AB684_RS10370	COG1404	Belongs to the peptidase S8 family
AB684_RS10380	COG1309	transcriptional regulator
AB684_RS10385	COG1846	Transcriptional regulator
AB684_RS10415	COG1309	transcriptional regulator
AB684_RS10420	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_RS10425	COG3708	Transcriptional regulator
AB684_RS10435	COG2378	regulation of single-species biofilm formation
AB684_RS10445	COG0640	Transcriptional regulator
AB684_RS10450	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_RS10460	COG0531	amino acid
AB684_RS10465	COG0741	lytic transglycosylase activity
AB684_RS10470	COG1086	Polysaccharide biosynthesis protein
AB684_RS10490	COG2322	membrane
AB684_RS10505	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_RS10510	COG1388	LysM domain
AB684_RS10510	COG3584	3D domain protein
AB684_RS10515	COG0514	ATP-dependent DNA helicase (RecQ)
AB684_RS10530	COG2315	Protein conserved in bacteria
AB684_RS10545	COG2427	Protein of unknown function (DUF1641)
AB684_RS10555	COG2801	Transposase and inactivated derivatives
AB684_RS10580	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
AB684_RS10630	COG0402	S-adenosylhomocysteine deaminase activity
AB684_RS10645	COG2267	carboxylic ester hydrolase activity
AB684_RS10655	COG1280	lysine exporter protein (LysE YggA)
AB684_RS10660	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AB684_RS10670	COG0574	Belongs to the PEP-utilizing enzyme family
AB684_RS10670	COG3848	Pyruvate phosphate dikinase
AB684_RS10675	COG1309	transcriptional regulator
AB684_RS10690	COG2318	DinB family
AB684_RS10695	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AB684_RS10700	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AB684_RS10715	COG1012	belongs to the aldehyde dehydrogenase family
AB684_RS10720	COG2814	Major facilitator Superfamily
AB684_RS10735	COG1657	PFAM Prenyltransferase squalene oxidase
AB684_RS10740	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AB684_RS10750	COG0733	neurotransmitter:sodium symporter activity
AB684_RS10755	COG0385	Bile acid
AB684_RS10760	COG0508	dehydrogenase complex catalyzes the overall conversion of
AB684_RS10765	COG0567	Dehydrogenase, E1 component
AB684_RS10770	COG4548	von Willebrand factor, type A
AB684_RS10775	COG0714	Associated with various cellular activities
AB684_RS10780	COG2032	superoxide dismutase activity
AB684_RS10785	COG1388	LysM domain
AB684_RS10785	COG0791	NLP P60 protein
AB684_RS10795	COG0534	Mate efflux family protein
AB684_RS10800	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AB684_RS10805	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AB684_RS10815	COG2962	Rard protein
AB684_RS10825	COG4305	rare lipoprotein A
AB684_RS10840	COG1733	regulation of RNA biosynthetic process
AB684_RS10845	COG0778	Nitroreductase
AB684_RS10850	COG0400	carboxylic ester hydrolase activity
AB684_RS10860	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_RS10870	COG2801	Transposase and inactivated derivatives
AB684_RS10875	COG0793	Belongs to the peptidase S41A family
AB684_RS10875	COG3409	Peptidoglycan-binding domain 1 protein
AB684_RS10880	COG2226	methyltransferase
AB684_RS10890	COG1876	peptidase activity
AB684_RS10895	COG0813	purine-nucleoside phosphorylase activity
AB684_RS10900	COG0701	Predicted permease
AB684_RS10915	COG0671	phosphoesterase, PA-phosphatase related
AB684_RS10925	COG4479	Belongs to the UPF0346 family
AB684_RS10935	COG1509	lysine 2,3-aminomutase activity
AB684_RS10940	COG3331	DNA recombination
AB684_RS10950	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
AB684_RS10970	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AB684_RS11000	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AB684_RS11020	COG0756	dUTP diphosphatase activity
AB684_RS11030	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS11040	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AB684_RS11055	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AB684_RS11055	COG1372	Participates in initiation and elongation during chromosome replication
AB684_RS11060	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AB684_RS11065	COG1780	Probably involved in ribonucleotide reductase function
AB684_RS11140	COG3584	3D domain protein
AB684_RS11145	COG0587	DNA-directed DNA polymerase activity
AB684_RS11155	COG0587	DNA-directed DNA polymerase activity
AB684_RS11160	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AB684_RS11165	COG0358	DNA primase activity
AB684_RS11170	COG0305	Participates in initiation and elongation during chromosome replication
AB684_RS11180	COG2887	Belongs to the helicase family. UvrD subfamily
AB684_RS11250	COG1793	dna ligase
AB684_RS11305	COG4474	Belongs to the UPF0398 family
AB684_RS11315	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AB684_RS11340	COG0582	viral genome integration into host DNA
AB684_RS11370	COG1404	Belongs to the peptidase S8 family
AB684_RS11455	COG3655	Transcriptional regulator
AB684_RS11530	COG1404	Belongs to the peptidase S8 family
AB684_RS11560	COG0776	regulation of translation
AB684_RS11680	COG0582	viral genome integration into host DNA
AB684_RS11745	COG1196	nuclear chromosome segregation
AB684_RS11745	COG0739	heme binding
AB684_RS11745	COG0741	lytic transglycosylase activity
AB684_RS11750	COG1196	nuclear chromosome segregation
AB684_RS11750	COG0739	heme binding
AB684_RS11750	COG0741	lytic transglycosylase activity
AB684_RS11760	COG2433	Pfam Transposase IS66
AB684_RS11770	COG5434	Belongs to the glycosyl hydrolase 28 family
AB684_RS11775	COG5632	N-Acetylmuramoyl-L-alanine amidase
AB684_RS11795	COG0457	Tetratricopeptide repeat
AB684_RS11800	COG2814	Major facilitator Superfamily
AB684_RS11830	COG5444	nuclease activity
AB684_RS11835	COG4282	regulation of fungal-type cell wall biogenesis
AB684_RS11845	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AB684_RS11850	COG1509	lysine 2,3-aminomutase activity
AB684_RS11855	COG0456	acetyltransferase
AB684_RS11860	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AB684_RS11865	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AB684_RS11870	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AB684_RS11875	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AB684_RS11885	COG0456	acetyltransferase
AB684_RS11890	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AB684_RS11895	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AB684_RS11900	COG1846	Transcriptional regulator
AB684_RS11910	COG3706	GGDEF domain
AB684_RS11915	COG0534	Mate efflux family protein
AB684_RS11930	COG4698	Protein conserved in bacteria
AB684_RS11935	COG2755	lipolytic protein G-D-S-L family
AB684_RS11940	COG1999	signal sequence binding
AB684_RS11955	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AB684_RS11960	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AB684_RS11965	COG1272	protein, Hemolysin III
AB684_RS11970	COG0204	Acyl-transferase
AB684_RS11975	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AB684_RS11980	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AB684_RS11990	COG2136	Putative SAM-dependent methyltransferase
AB684_RS11990	COG2521	methyltransferase
AB684_RS12000	COG0129	dihydroxy-acid dehydratase activity
AB684_RS12005	COG1413	lyase activity
AB684_RS12010	COG1418	mRNA catabolic process
AB684_RS12015	COG0386	Belongs to the glutathione peroxidase family
AB684_RS12020	COG2759	Belongs to the formate--tetrahydrofolate ligase family
AB684_RS12025	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
AB684_RS12030	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AB684_RS12040	COG1278	Cold shock
AB684_RS12060	COG0328	RNA-DNA hybrid ribonuclease activity
AB684_RS12065	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AB684_RS12070	COG0328	RNA-DNA hybrid ribonuclease activity
AB684_RS12080	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AB684_RS12090	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AB684_RS12100	COG1755	Isoprenylcysteine carboxyl methyltransferase
AB684_RS12105	COG3424	synthase
AB684_RS12110	COG0456	acetyltransferase
AB684_RS12115	COG2233	PERMEase
AB684_RS12120	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AB684_RS12125	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AB684_RS12130	COG1199	ATP-dependent helicase activity
AB684_RS12140	COG2801	Transposase and inactivated derivatives
AB684_RS12150	COG0116	Belongs to the methyltransferase superfamily
AB684_RS12160	COG3599	regulation of cell shape
AB684_RS12165	COG4474	Belongs to the UPF0398 family
AB684_RS12175	COG3359	exonuclease
AB684_RS12180	COG1111	helicase
AB684_RS12180	COG1205	dead DEAH box helicase
AB684_RS12185	COG2190	(PTS) system
AB684_RS12190	COG0071	Belongs to the small heat shock protein (HSP20) family
AB684_RS12230	COG3331	DNA recombination
AB684_RS12235	COG4499	WXG100 protein secretion system (Wss), protein YukC
AB684_RS12235	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AB684_RS12245	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AB684_RS12250	COG3935	DnaD domain protein
AB684_RS12255	COG0017	Asparaginyl-tRNA synthetase
AB684_RS12260	COG0436	Aminotransferase
AB684_RS12265	COG5353	protein conserved in bacteria
AB684_RS12270	COG1199	ATP-dependent helicase activity
AB684_RS12270	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AB684_RS12275	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
AB684_RS12280	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AB684_RS12285	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AB684_RS12300	COG0617	tRNA 3'-terminal CCA addition
AB684_RS12305	COG0438	transferase activity, transferring glycosyl groups
AB684_RS12310	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AB684_RS12315	COG1803	Methylglyoxal synthase
AB684_RS12320	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AB684_RS12325	COG1694	Mazg nucleotide pyrophosphohydrolase
AB684_RS12330	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_RS12340	COG4347	Protein of unknown function (DUF1405)
AB684_RS12345	COG2010	Cytochrome c
AB684_RS12345	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AB684_RS12350	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AB684_RS12355	COG0723	plastoquinol--plastocyanin reductase activity
AB684_RS12365	COG5582	Belongs to the UPF0302 family
AB684_RS12370	COG0457	Tetratricopeptide repeat
AB684_RS12375	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AB684_RS12380	COG0287	Prephenate dehydrogenase
AB684_RS12385	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AB684_RS12390	COG0159	tryptophan synthase activity
AB684_RS12395	COG0133	tryptophan synthase activity
AB684_RS12400	COG0135	phosphoribosylanthranilate isomerase activity
AB684_RS12405	COG0134	indole-3-glycerol-phosphate synthase activity
AB684_RS12410	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AB684_RS12415	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AB684_RS12420	COG4401	Chorismate mutase type I
AB684_RS12425	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AB684_RS12430	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AB684_RS12435	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AB684_RS12440	COG0105	UTP biosynthetic process
AB684_RS12445	COG0142	geranyltranstransferase activity
AB684_RS12450	COG2226	methyltransferase
AB684_RS12455	COG0142	geranyltranstransferase activity
AB684_RS12470	COG0776	regulation of translation
AB684_RS12475	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AB684_RS12495	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AB684_RS12500	COG1160	GTP binding
AB684_RS12520	COG1304	FMN binding
AB684_RS12525	COG0539	negative regulation of cytoplasmic translation
AB684_RS12530	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AB684_RS12535	COG2959	enzyme of heme biosynthesis
AB684_RS12540	COG3409	Peptidoglycan-binding domain 1 protein
AB684_RS12540	COG3773	Cell wall hydrolase
AB684_RS12545	COG2339	peptidase activity
AB684_RS12555	COG0492	ferredoxin-NADP+ reductase activity
AB684_RS12560	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AB684_RS12565	COG4862	establishment of competence for transformation
AB684_RS12570	COG1408	metallophosphoesterase
AB684_RS12580	COG1388	LysM domain
AB684_RS12585	COG1266	CAAX protease self-immunity
AB684_RS12590	COG0514	ATP-dependent DNA helicase (RecQ)
AB684_RS12595	COG4955	Helix-turn-helix domain
AB684_RS12600	COG1141	Ferredoxin
AB684_RS12610	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AB684_RS12615	COG0739	heme binding
AB684_RS12625	COG1595	DNA-templated transcription, initiation
AB684_RS12630	COG1316	TRANSCRIPTIONal
AB684_RS12645	COG5002	protein histidine kinase activity
AB684_RS12650	COG0745	RESPONSE REGULATOR receiver
AB684_RS12655	COG5002	protein histidine kinase activity
AB684_RS12660	COG0745	RESPONSE REGULATOR receiver
AB684_RS12665	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AB684_RS12670	COG1333	cytochrome c biogenesis protein
AB684_RS12675	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS12680	COG1187	pseudouridine synthase activity
AB684_RS12685	COG0700	Nucleoside recognition
AB684_RS12690	COG2715	membrane protein required for spore maturation
AB684_RS12695	COG1686	Belongs to the peptidase S11 family
AB684_RS12705	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AB684_RS12710	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AB684_RS12715	COG1547	Domain of unknown function (DUF309)
AB684_RS12720	COG0456	acetyltransferase
AB684_RS12725	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AB684_RS12730	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AB684_RS12730	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AB684_RS12735	COG0307	riboflavin synthase, alpha
AB684_RS12740	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AB684_RS12740	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AB684_RS12765	COG0457	Tetratricopeptide repeat
AB684_RS12770	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AB684_RS12775	COG4086	secreted protein
AB684_RS12780	COG4195	phage-related replication protein
AB684_RS12785	COG0019	diaminopimelate decarboxylase activity
AB684_RS12795	COG0697	spore germination
AB684_RS12810	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AB684_RS12845	COG1686	Belongs to the peptidase S11 family
AB684_RS12850	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AB684_RS12855	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AB684_RS12860	COG4974	Belongs to the 'phage' integrase family
AB684_RS12870	COG0735	belongs to the Fur family
AB684_RS12875	COG1300	Membrane
AB684_RS12880	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_RS12890	COG1953	Uracil, thiamine, allantoin
AB684_RS12895	COG1953	Uracil, thiamine, allantoin
AB684_RS12905	COG2153	protein acetylation
AB684_RS12910	COG1379	DNA repair
AB684_RS12915	COG0494	nUDIX hydrolase
AB684_RS12920	COG1309	transcriptional regulator
AB684_RS12930	COG0667	Aldo Keto reductase
AB684_RS12940	COG1073	alpha beta
AB684_RS12950	COG4918	Iron-sulphur cluster biosynthesis
AB684_RS12965	COG2329	Antibiotic biosynthesis monooxygenase
AB684_RS12975	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AB684_RS12985	COG0747	negative chemotaxis
AB684_RS12990	COG0601	transmembrane transport
AB684_RS13000	COG0444	Belongs to the ABC transporter superfamily
AB684_RS13010	COG0534	Mate efflux family protein
AB684_RS13025	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AB684_RS13035	COG2211	Major facilitator Superfamily
AB684_RS13040	COG0346	lactoylglutathione lyase activity
AB684_RS13045	COG1072	(Pantothenic acid kinase))
AB684_RS13060	COG1131	(ABC) transporter
AB684_RS13080	COG4195	phage-related replication protein
AB684_RS13090	COG0300	oxidoreductase activity
AB684_RS13095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_RS13100	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AB684_RS13105	COG4187	Peptidase family M20/M25/M40
AB684_RS13110	COG1902	pentaerythritol trinitrate reductase activity
AB684_RS13115	COG0596	Alpha beta hydrolase
AB684_RS13120	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AB684_RS13125	COG1234	tRNA 3'-trailer cleavage
AB684_RS13130	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AB684_RS13145	COG2358	TRAP transporter, solute receptor (TAXI family
AB684_RS13150	COG2188	Transcriptional regulator
AB684_RS13155	COG2723	6-phospho-beta-galactosidase activity
AB684_RS13160	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_RS13165	COG1447	Phosphotransferase system cellobiose-specific component IIA
AB684_RS13170	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_RS13175	COG1785	Belongs to the alkaline phosphatase family
AB684_RS13180	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS13185	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AB684_RS13190	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AB684_RS13200	COG0706	membrane insertase activity
AB684_RS13205	COG2195	Cleaves the N-terminal amino acid of tripeptides
AB684_RS13210	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AB684_RS13215	COG4129	membrane
AB684_RS13220	COG1126	abc transporter atp-binding protein
AB684_RS13225	COG0765	amino acid transport
AB684_RS13230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AB684_RS13240	COG1597	lipid kinase activity
AB684_RS13245	COG0508	dehydrogenase complex catalyzes the overall conversion of
AB684_RS13250	COG0022	dehydrogenase e1 component
AB684_RS13255	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AB684_RS13260	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AB684_RS13265	COG3426	butyrate kinase activity
AB684_RS13275	COG0280	phosphate acetyltransferase
AB684_RS13280	COG3829	transcription factor binding
AB684_RS13280	COG3290	protein histidine kinase activity
AB684_RS13290	COG0584	glycerophosphoryl diester phosphodiesterase
AB684_RS13295	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_RS13310	COG1045	serine acetyltransferase
AB684_RS13320	COG0745	RESPONSE REGULATOR receiver
AB684_RS13325	COG0750	zinc metalloprotease
AB684_RS13330	COG0497	DNA recombination
AB684_RS13335	COG1438	arginine binding
AB684_RS13340	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
AB684_RS13345	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AB684_RS13350	COG0142	geranyltranstransferase activity
AB684_RS13355	COG1722	exodeoxyribonuclease VII activity
AB684_RS13360	COG1570	exodeoxyribonuclease VII activity
AB684_RS13365	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AB684_RS13370	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AB684_RS13375	COG1302	Protein conserved in bacteria
AB684_RS13380	COG0439	Biotin carboxylase
AB684_RS13385	COG0511	ligase activity, forming carbon-carbon bonds
AB684_RS13425	COG3854	ATPases associated with a variety of cellular activities
AB684_RS13435	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AB684_RS13440	COG0006	proline dipeptidase activity
AB684_RS13445	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AB684_RS13455	COG3872	metal-dependent enzyme
AB684_RS13465	COG1752	Esterase of the alpha-beta hydrolase superfamily
AB684_RS13475	COG1321	iron dependent repressor
AB684_RS13480	COG0095	Lipoate-protein ligase
AB684_RS13485	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AB684_RS13490	COG2113	Glycine betaine
AB684_RS13495	COG4176	ABC-type proline glycine betaine transport system permease component
AB684_RS13500	COG0517	IMP dehydrogenase activity
AB684_RS13500	COG4175	Glycine betaine
AB684_RS13505	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AB684_RS13510	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AB684_RS13515	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AB684_RS13520	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AB684_RS13545	COG0681	Belongs to the peptidase S26 family
AB684_RS13570	COG4940	Competence protein ComGF
AB684_RS13580	COG4970	Tfp pilus assembly protein FimT
AB684_RS13585	COG4537	Required for transformation and DNA binding
AB684_RS13590	COG1459	type II secretion system
AB684_RS13595	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AB684_RS13600	COG1366	Belongs to the anti-sigma-factor antagonist family
AB684_RS13610	COG1393	Belongs to the ArsC family
AB684_RS13620	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_RS13625	COG0011	TIGRFAM Protein of
AB684_RS13635	COG2866	Carboxypeptidase
AB684_RS13640	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_RS13645	COG1368	sulfuric ester hydrolase activity
AB684_RS13650	COG1940	carbohydrate kinase activity
AB684_RS13655	COG4483	Protein conserved in bacteria
AB684_RS13660	COG0697	spore germination
AB684_RS13665	COG0457	Tetratricopeptide repeat
AB684_RS13665	COG0705	Rhomboid family
AB684_RS13670	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AB684_RS13675	COG0438	transferase activity, transferring glycosyl groups
AB684_RS13690	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AB684_RS13695	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AB684_RS13700	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AB684_RS13705	COG0581	inorganic phosphate transmembrane transporter activity
AB684_RS13710	COG0573	inorganic phosphate transmembrane transporter activity
AB684_RS13715	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AB684_RS13720	COG0768	penicillin binding
AB684_RS13725	COG0477	Major facilitator Superfamily
AB684_RS13730	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AB684_RS13735	COG2839	Protein conserved in bacteria
AB684_RS13740	COG5521	maltodextrose utilization protein MalA
AB684_RS13745	COG1388	LysM domain
AB684_RS13750	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AB684_RS13755	COG4709	membrane
AB684_RS13760	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
AB684_RS13765	COG0735	belongs to the Fur family
AB684_RS13770	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AB684_RS13775	COG1121	(ABC) transporter
AB684_RS13780	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_RS13790	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AB684_RS13795	COG0513	Belongs to the DEAD box helicase family
AB684_RS13805	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AB684_RS13810	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AB684_RS13815	COG2384	SAM-dependent methyltransferase
AB684_RS13870	COG5444	nuclease activity
AB684_RS13885	COG2010	Cytochrome c
AB684_RS13890	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AB684_RS13895	COG0358	DNA primase activity
AB684_RS13900	COG1671	Belongs to the UPF0178 family
AB684_RS13905	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AB684_RS13910	COG0517	IMP dehydrogenase activity
AB684_RS13915	COG0751	glycine-tRNA ligase activity
AB684_RS13920	COG0752	glycyl-tRNA synthetase alpha subunit
AB684_RS13925	COG1381	Involved in DNA repair and RecF pathway recombination
AB684_RS13930	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AB684_RS13935	COG0295	cytidine deaminase activity
AB684_RS13940	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AB684_RS13945	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AB684_RS13950	COG1480	7TM receptor with intracellular HD hydrolase
AB684_RS13955	COG1702	phosphate starvation-inducible protein PhoH
AB684_RS13960	COG0561	phosphatase activity
AB684_RS13975	COG4864	UPF0365 protein
AB684_RS13980	COG1030	water channel activity
AB684_RS13985	COG1610	YqeY-like protein
AB684_RS13990	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AB684_RS13995	COG1283	sodium-dependent phosphate transmembrane transporter activity
AB684_RS14000	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AB684_RS14005	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AB684_RS14010	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AB684_RS14015	COG2264	protein methyltransferase activity
AB684_RS14020	COG0484	heat shock protein binding
AB684_RS14025	COG0443	Heat shock 70 kDa protein
AB684_RS14030	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AB684_RS14035	COG1420	regulation of RNA biosynthetic process
AB684_RS14040	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AB684_RS14045	COG0481	GTPase activity
AB684_RS14055	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_RS14060	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AB684_RS14065	COG0268	Binds directly to 16S ribosomal RNA
AB684_RS14070	COG1466	dna polymerase III delta subunit
AB684_RS14075	COG0658	competence protein
AB684_RS14075	COG2333	competence protein COMEC
AB684_RS14080	COG2131	deaminase
AB684_RS14085	COG1596	polysaccharide export
AB684_RS14085	COG1555	photosystem II stabilization
AB684_RS14090	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AB684_RS14095	COG2226	methyltransferase
AB684_RS14100	COG0799	negative regulation of ribosome biogenesis
AB684_RS14105	COG1713	HD superfamily hydrolase involved in NAD metabolism
AB684_RS14110	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AB684_RS14115	COG1534	Rna-binding protein
AB684_RS14120	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AB684_RS14125	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AB684_RS14130	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
AB684_RS14140	COG2755	lipolytic protein G-D-S-L family
AB684_RS14145	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_RS14150	COG5609	conserved protein (DUF2294)
AB684_RS14155	COG3383	formate dehydrogenase (NAD+) activity
AB684_RS14160	COG2427	Protein of unknown function (DUF1641)
AB684_RS14195	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_RS14235	COG1136	(ABC) transporter
AB684_RS14240	COG0577	efflux transmembrane transporter activity
AB684_RS14315	COG2197	response regulator
AB684_RS14320	COG4585	Histidine kinase
AB684_RS14325	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS14330	COG0730	response to heat
AB684_RS14335	COG0425	Belongs to the sulfur carrier protein TusA family
AB684_RS14340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_RS14340	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AB684_RS14345	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AB684_RS14345	COG0425	Belongs to the sulfur carrier protein TusA family
AB684_RS14350	COG2210	Belongs to the sulfur carrier protein TusA family
AB684_RS14355	COG1937	Protein conserved in bacteria
AB684_RS14385	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AB684_RS14390	COG0113	porphobilinogen synthase activity
AB684_RS14395	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AB684_RS14400	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
AB684_RS14405	COG1733	regulation of RNA biosynthetic process
AB684_RS14410	COG3239	Fatty acid desaturase
AB684_RS14415	COG4585	Histidine kinase
AB684_RS14420	COG2197	response regulator
AB684_RS14425	COG0492	ferredoxin-NADP+ reductase activity
AB684_RS14430	COG0747	negative chemotaxis
AB684_RS14435	COG0601	transmembrane transport
AB684_RS14440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AB684_RS14445	COG0444	Belongs to the ABC transporter superfamily
AB684_RS14450	COG4608	Belongs to the ABC transporter superfamily
AB684_RS14470	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS14485	COG2124	cytochrome p450
AB684_RS14490	COG0730	response to heat
AB684_RS14505	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS14510	COG1621	beta-fructofuranosidase activity
AB684_RS14515	COG3716	PTS system mannose fructose sorbose family IID component
AB684_RS14520	COG3715	PTS system
AB684_RS14525	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS14530	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_RS14535	COG3933	PFAM sigma-54 factor interaction domain-containing protein
AB684_RS14535	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AB684_RS14555	COG2169	Transcriptional regulator
AB684_RS14560	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AB684_RS14565	COG0656	L-ascorbic acid biosynthetic process
AB684_RS14570	COG2814	Major facilitator Superfamily
AB684_RS14575	COG1733	regulation of RNA biosynthetic process
AB684_RS14580	COG3340	Belongs to the peptidase S51 family
AB684_RS14585	COG1587	Uroporphyrinogen-III synthase
AB684_RS14595	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_RS14600	COG0583	DNA-binding transcription factor activity
AB684_RS14605	COG2814	Major facilitator Superfamily
AB684_RS14615	COG2124	cytochrome p450
AB684_RS14615	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AB684_RS14620	COG1309	transcriptional regulator
AB684_RS14625	COG1404	Belongs to the peptidase S8 family
AB684_RS14630	COG2226	methyltransferase
AB684_RS14645	COG0626	cystathionine gamma-synthase activity
AB684_RS14650	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AB684_RS14655	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AB684_RS14660	COG2226	methyltransferase
AB684_RS14675	COG0768	penicillin binding
AB684_RS14680	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AB684_RS14685	COG0572	uridine kinase
AB684_RS14690	COG0826	peptidase U32
AB684_RS14695	COG0826	peptidase U32
AB684_RS14700	COG4122	O-methyltransferase activity
AB684_RS14705	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AB684_RS14710	COG3906	Belongs to the UPF0473 family
AB684_RS14715	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AB684_RS14720	COG4472	Bacterial protein of unknown function (DUF965)
AB684_RS14725	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AB684_RS14730	COG0628	permease
AB684_RS14740	COG3881	PFAM PRC-barrel domain
AB684_RS14745	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AB684_RS14750	COG0457	Tetratricopeptide repeat
AB684_RS14755	COG0482	sulfurtransferase activity
AB684_RS14760	COG1104	cysteine desulfurase activity
AB684_RS14765	COG1959	2 iron, 2 sulfur cluster binding
AB684_RS14770	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AB684_RS14775	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AB684_RS14785	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AB684_RS14790	COG0124	histidyl-tRNA synthetase
AB684_RS14795	COG4991	sh3 domain protein
AB684_RS14795	COG3103	Sh3 type 3 domain protein
AB684_RS14795	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_RS14800	COG1490	D-aminoacyl-tRNA deacylase activity
AB684_RS14805	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AB684_RS14810	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AB684_RS14815	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AB684_RS14815	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AB684_RS14820	COG5416	Lipopolysaccharide assembly protein A domain
AB684_RS14825	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AB684_RS14825	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AB684_RS14835	COG2244	polysaccharide biosynthetic process
AB684_RS14840	COG2323	membrane
AB684_RS14850	COG1862	Preprotein translocase
AB684_RS14855	COG0343	queuine tRNA-ribosyltransferase activity
AB684_RS14860	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AB684_RS14870	COG2255	four-way junction helicase activity
AB684_RS14875	COG0632	four-way junction helicase activity
AB684_RS14885	COG2112	serine threonine protein kinase
AB684_RS14895	COG2318	DinB family
AB684_RS14900	COG4195	phage-related replication protein
AB684_RS14915	COG0217	transcriptional regulatory protein
AB684_RS14925	COG1388	LysM domain
AB684_RS14930	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AB684_RS14935	COG0157	Belongs to the NadC ModD family
AB684_RS14940	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AB684_RS14945	COG1104	cysteine desulfurase activity
AB684_RS14950	COG1827	regulation of RNA biosynthetic process
AB684_RS14955	COG0077	Prephenate dehydratase
AB684_RS14960	COG4492	Belongs to the UPF0735 family
AB684_RS14965	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AB684_RS14970	COG3290	protein histidine kinase activity
AB684_RS14975	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AB684_RS14980	COG2868	ribosomal protein
AB684_RS14985	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AB684_RS14990	COG1994	Peptidase M50
AB684_RS14995	COG0739	heme binding
AB684_RS15000	COG3832	glyoxalase III activity
AB684_RS15005	COG0640	Transcriptional regulator
AB684_RS15010	COG2894	cell division
AB684_RS15015	COG0850	regulation of cytokinetic process
AB684_RS15020	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AB684_RS15030	COG1077	Cell shape determining protein MreB Mrl
AB684_RS15035	COG2003	Belongs to the UPF0758 family
AB684_RS15040	COG0424	maF-like protein
AB684_RS15050	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AB684_RS15055	COG0285	dihydrofolate synthase activity
AB684_RS15060	COG0525	valine-tRNA ligase activity
AB684_RS15070	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AB684_RS15075	COG1388	LysM domain
AB684_RS15080	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AB684_RS15085	COG0113	porphobilinogen synthase activity
AB684_RS15090	COG1587	Uroporphyrinogen-III synthase
AB684_RS15095	COG0181	hydroxymethylbilane synthase activity
AB684_RS15100	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AB684_RS15105	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AB684_RS15115	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AB684_RS15120	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AB684_RS15125	COG0470	DNA polymerase III
AB684_RS15125	COG1067	ATP-dependent peptidase activity
AB684_RS15130	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AB684_RS15135	COG0544	peptidyl-prolyl cis-trans isomerase activity
AB684_RS15140	COG1477	protein flavinylation
AB684_RS15140	COG0457	Tetratricopeptide repeat
AB684_RS15145	COG0066	3-isopropylmalate dehydratase activity
AB684_RS15150	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AB684_RS15155	COG0473	3-isopropylmalate dehydrogenase activity
AB684_RS15160	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AB684_RS15165	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AB684_RS15170	COG0440	acetolactate synthase activity
AB684_RS15175	COG0028	Belongs to the TPP enzyme family
AB684_RS15185	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AB684_RS15195	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AB684_RS15215	COG5518	Phage portal protein
AB684_RS15265	COG2801	Transposase and inactivated derivatives
AB684_RS15280	COG5444	nuclease activity
AB684_RS15285	COG0457	Tetratricopeptide repeat
AB684_RS15300	COG0622	Phosphoesterase
AB684_RS15305	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AB684_RS15310	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AB684_RS15315	COG5401	PFAM Sporulation and spore germination
AB684_RS15320	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AB684_RS15325	COG1846	Transcriptional regulator
AB684_RS15330	COG2197	response regulator
AB684_RS15335	COG4221	oxidoreductase activity
AB684_RS15340	COG0824	Thioesterase
AB684_RS15345	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AB684_RS15350	COG1053	succinate dehydrogenase
AB684_RS15355	COG2009	succinate dehydrogenase
AB684_RS15360	COG1719	4-vinyl reductase, 4VR
AB684_RS15365	COG0527	aspartate kinase activity
AB684_RS15370	COG0322	excinuclease ABC activity
AB684_RS15375	COG3118	belongs to the thioredoxin family
AB684_RS15380	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AB684_RS15385	COG2086	electron transfer activity
AB684_RS15390	COG1024	Enoyl-CoA hydratase
AB684_RS15395	COG1309	transcriptional regulator
AB684_RS15400	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_RS15405	COG3766	membrane
AB684_RS15410	COG1193	negative regulation of DNA recombination
AB684_RS15415	COG1796	DNA polymerase
AB684_RS15415	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AB684_RS15420	COG1286	toxin biosynthetic process
AB684_RS15425	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
AB684_RS15430	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AB684_RS15450	COG2801	Transposase and inactivated derivatives
AB684_RS15465	COG1137	ATPase activity
AB684_RS15480	COG0072	phenylalanine-tRNA ligase activity
AB684_RS15480	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AB684_RS15485	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AB684_RS15490	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AB684_RS15500	COG1966	Carbon starvation protein
AB684_RS15515	COG0395	ABC-type sugar transport system, permease component
AB684_RS15520	COG1175	transmembrane transport
AB684_RS15525	COG1653	transport
AB684_RS15530	COG0371	Dehydrogenase
AB684_RS15535	COG0235	Class ii aldolase
AB684_RS15540	COG1069	ribulokinase activity
AB684_RS15545	COG2160	L-arabinose isomerase activity
AB684_RS15550	COG3507	Belongs to the glycosyl hydrolase 43 family
AB684_RS15555	COG1363	Peptidase, m42
AB684_RS15565	COG3326	Membrane
AB684_RS15570	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AB684_RS15575	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AB684_RS15580	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AB684_RS15585	COG1346	cytolysis
AB684_RS15595	COG3540	Alkaline phosphatase
AB684_RS15600	COG3279	Response regulator of the LytR AlgR family
AB684_RS15605	COG3275	phosphorelay sensor kinase activity
AB684_RS15615	COG1011	Hydrolase
AB684_RS15620	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AB684_RS15630	COG0398	Pfam SNARE associated Golgi protein
AB684_RS15635	COG1484	DNA-dependent DNA replication
AB684_RS15640	COG3611	Membrane attachment protein
AB684_RS15645	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AB684_RS15660	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
AB684_RS15665	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AB684_RS15670	COG3866	Pectate lyase
AB684_RS15675	COG0237	dephospho-CoA kinase activity
AB684_RS15680	COG1971	Probably functions as a manganese efflux pump
AB684_RS15685	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AB684_RS15690	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AB684_RS15690	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AB684_RS15695	COG5002	protein histidine kinase activity
AB684_RS15700	COG0745	RESPONSE REGULATOR receiver
AB684_RS15705	COG0039	L-malate dehydrogenase activity
AB684_RS15710	COG0538	isocitrate dehydrogenase activity
AB684_RS15715	COG0372	Belongs to the citrate synthase family
AB684_RS15720	COG2707	UPF0756 membrane protein
AB684_RS15725	COG0628	permease
AB684_RS15730	COG3030	protein affecting phage T7 exclusion by the F plasmid
AB684_RS15740	COG0205	6-phosphofructokinase activity
AB684_RS15745	COG0825	malonyl-CoA metabolic process
AB684_RS15750	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AB684_RS15755	COG0281	malic enzyme
AB684_RS15760	COG0587	DNA-directed DNA polymerase activity
AB684_RS15780	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AB684_RS15790	COG4109	DRTGG domain
AB684_RS15795	COG1695	Transcriptional regulator
AB684_RS15800	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AB684_RS15805	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS15810	COG0165	Argininosuccinate lyase
AB684_RS15815	COG0137	argininosuccinate synthase activity
AB684_RS15820	COG0521	Mo-molybdopterin cofactor biosynthetic process
AB684_RS15825	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AB684_RS15830	COG0827	DNA restriction-modification system
AB684_RS15835	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AB684_RS15840	COG3874	Sporulation protein YtfJ
AB684_RS15850	COG1714	RDD family
AB684_RS15855	COG0616	signal peptide processing
AB684_RS15860	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AB684_RS15865	COG1566	PFAM secretion protein HlyD family protein
AB684_RS15870	COG0477	Major facilitator Superfamily
AB684_RS15880	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AB684_RS15890	COG0301	tRNA thio-modification
AB684_RS15895	COG1104	cysteine desulfurase activity
AB684_RS15900	COG1114	Component of the transport system for branched-chain amino acids
AB684_RS15905	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AB684_RS15910	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AB684_RS15915	COG1309	transcriptional regulator
AB684_RS15920	COG1956	GAF domain-containing protein
AB684_RS15925	COG2203	Gaf domain
AB684_RS15925	COG2199	diguanylate cyclase activity
AB684_RS15930	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AB684_RS15945	COG3152	Membrane
AB684_RS15950	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AB684_RS15955	COG1522	sequence-specific DNA binding
AB684_RS15960	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AB684_RS15965	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AB684_RS15970	COG0454	-acetyltransferase
AB684_RS15975	COG0517	IMP dehydrogenase activity
AB684_RS15980	COG0123	including yeast histone deacetylase and acetoin utilization protein
AB684_RS15985	COG1360	Flagellar Motor Protein
AB684_RS15990	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AB684_RS15995	COG1609	Transcriptional regulator
AB684_RS16000	COG1605	Chorismate mutase
AB684_RS16000	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AB684_RS16010	COG3118	belongs to the thioredoxin family
AB684_RS16015	COG4980	gas vesicle protein
AB684_RS16020	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AB684_RS16025	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AB684_RS16030	COG1674	ftsk spoiiie
AB684_RS16035	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AB684_RS16040	COG4848	Belongs to the UPF0354 family
AB684_RS16045	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS16055	COG1363	Peptidase, m42
AB684_RS16060	COG5584	Small secreted protein
AB684_RS16065	COG0281	malic enzyme
AB684_RS16070	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_RS16075	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AB684_RS16085	COG0510	thiamine kinase activity
AB684_RS16090	COG1523	belongs to the glycosyl hydrolase 13 family
AB684_RS16095	COG1597	lipid kinase activity
AB684_RS16105	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AB684_RS16110	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AB684_RS16125	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AB684_RS16130	COG2252	PERMEase
AB684_RS16135	COG1349	DNA-binding transcription factor activity
AB684_RS16140	COG1187	pseudouridine synthase activity
AB684_RS16145	COG2244	polysaccharide biosynthetic process
AB684_RS16150	COG2081	HI0933 family
AB684_RS16155	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AB684_RS16170	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AB684_RS16175	COG0457	Tetratricopeptide repeat
AB684_RS16185	COG5578	integral membrane protein
AB684_RS16190	COG0673	inositol 2-dehydrogenase activity
AB684_RS16195	COG1653	transport
AB684_RS16200	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AB684_RS16205	COG4209	transmembrane transport
AB684_RS16210	COG2207	Transcriptional regulator
AB684_RS16215	COG1653	transport
AB684_RS16220	COG0395	ABC-type sugar transport system, permease component
AB684_RS16225	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AB684_RS16230	COG1073	alpha beta
AB684_RS16240	COG0583	DNA-binding transcription factor activity
AB684_RS16245	COG0346	lactoylglutathione lyase activity
AB684_RS16250	COG0495	leucyl-tRNA aminoacylation
AB684_RS16260	COG2814	Major facilitator Superfamily
AB684_RS16270	COG2433	Pfam Transposase IS66
AB684_RS16275	COG0577	efflux transmembrane transporter activity
AB684_RS16280	COG1136	(ABC) transporter
AB684_RS16290	COG1131	(ABC) transporter
AB684_RS16295	COG1725	Transcriptional regulator
AB684_RS16305	COG1242	4 iron, 4 sulfur cluster binding
AB684_RS16310	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AB684_RS16315	COG1301	dicarboxylic acid transport
AB684_RS16325	COG2267	carboxylic ester hydrolase activity
AB684_RS16330	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AB684_RS16335	COG0671	phosphoesterase, PA-phosphatase related
AB684_RS16340	COG0438	transferase activity, transferring glycosyl groups
AB684_RS16340	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AB684_RS16345	COG0367	asparagine synthase
AB684_RS16350	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AB684_RS16355	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
AB684_RS16360	COG1301	dicarboxylic acid transport
AB684_RS16370	COG1506	peptidase
AB684_RS16375	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AB684_RS16380	COG1116	anion transmembrane transporter activity
AB684_RS16385	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AB684_RS16390	COG0494	nUDIX hydrolase
AB684_RS16400	COG4824	toxin secretion phage lysis holin
AB684_RS16405	COG0783	Belongs to the Dps family
AB684_RS16415	COG1854	S-ribosylhomocysteine lyase activity
AB684_RS16420	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AB684_RS16425	COG0288	reversible hydration of carbon dioxide
AB684_RS16430	COG0523	cobalamin synthesis protein
AB684_RS16435	COG0803	Belongs to the bacterial solute-binding protein 9 family
AB684_RS16440	COG0254	rRNA binding
AB684_RS16445	COG1271	oxidase subunit
AB684_RS16450	COG1294	oxidase, subunit
AB684_RS16460	COG4948	Mandelate Racemase Muconate Lactonizing
AB684_RS16465	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_RS16470	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AB684_RS16475	COG0596	Alpha beta hydrolase
AB684_RS16480	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
AB684_RS16485	COG1169	isochorismate synthase
AB684_RS16490	COG1575	Belongs to the MenA family. Type 1 subfamily
AB684_RS16495	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AB684_RS16510	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AB684_RS16515	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AB684_RS16520	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AB684_RS16645	COG1609	Transcriptional regulator
AB684_RS16650	COG3859	Proton-coupled thiamine transporter YuaJ
AB684_RS16655	COG3764	Sortase (surface protein transpeptidase)
AB684_RS16670	COG0457	Tetratricopeptide repeat
AB684_RS16675	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AB684_RS16680	COG0569	domain protein
AB684_RS16685	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AB684_RS16695	COG2318	DinB family
AB684_RS16705	COG1454	alcohol dehydrogenase
AB684_RS16710	COG1012	belongs to the aldehyde dehydrogenase family
AB684_RS16715	COG1510	regulation of RNA biosynthetic process
AB684_RS16725	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AB684_RS16730	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AB684_RS16735	COG2140	Oxalate decarboxylase
AB684_RS16765	COG1397	ADP-ribosylglycohydrolase
AB684_RS16800	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
AB684_RS16810	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AB684_RS16815	COG0726	polysaccharide deacetylase
AB684_RS16820	COG1408	metallophosphoesterase
AB684_RS16825	COG1968	undecaprenyl-diphosphatase activity
AB684_RS16830	COG0628	permease
AB684_RS16835	COG0673	inositol 2-dehydrogenase activity
AB684_RS16840	COG0693	protein deglycase activity
AB684_RS16845	COG0840	transmembrane signaling receptor activity
AB684_RS16850	COG0840	transmembrane signaling receptor activity
AB684_RS16855	COG0840	transmembrane signaling receptor activity
AB684_RS16865	COG2070	2-Nitropropane dioxygenase
AB684_RS16870	COG0432	Pfam Uncharacterised protein family UPF0047
AB684_RS16875	COG0366	Alpha amylase catalytic
AB684_RS16890	COG5297	Belongs to the glycosyl hydrolase family 6
AB684_RS16895	COG1253	flavin adenine dinucleotide binding
AB684_RS16900	COG2738	Putative neutral zinc metallopeptidase
AB684_RS16910	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AB684_RS16920	COG2323	membrane
AB684_RS16925	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
AB684_RS16935	COG0166	Belongs to the GPI family
AB684_RS16940	COG1979	alcohol dehydrogenase
AB684_RS16945	COG2155	Conserved Protein
AB684_RS16950	COG1098	S1 RNA binding domain
AB684_RS16955	COG0436	Aminotransferase
AB684_RS16960	COG1522	sequence-specific DNA binding
AB684_RS16965	COG2267	carboxylic ester hydrolase activity
AB684_RS16980	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AB684_RS16995	COG5018	Exonuclease
AB684_RS17000	COG2814	Major facilitator Superfamily
AB684_RS17005	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AB684_RS17010	COG3011	Protein conserved in bacteria
AB684_RS17020	COG3290	protein histidine kinase activity
AB684_RS17025	COG4565	transcriptional regulatory protein
AB684_RS17030	COG1183	phosphatidylcholine synthase activity
AB684_RS17035	COG0586	Pfam SNARE associated Golgi protein
AB684_RS17040	COG0688	phosphatidylethanolamine metabolic process
AB684_RS17045	COG3493	citrate carrier protein
AB684_RS17055	COG2111	Na H antiporter
AB684_RS17055	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AB684_RS17060	COG2111	Na H antiporter
AB684_RS17065	COG1006	Multisubunit Na H antiporter MnhC subunit
AB684_RS17070	COG0651	ATP synthesis coupled electron transport
AB684_RS17075	COG1863	multisubunit Na H antiporter MnhE subunit
AB684_RS17080	COG2212	antiporter activity
AB684_RS17085	COG1320	monovalent cation:proton antiporter activity
AB684_RS17090	COG2050	protein possibly involved in aromatic compounds catabolism
AB684_RS17095	COG2197	response regulator
AB684_RS17100	COG4585	Histidine kinase
AB684_RS17130	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AB684_RS17135	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AB684_RS17140	COG1335	isochorismatase
AB684_RS17145	COG5506	Protein of unknown function (DUF1694)
AB684_RS17160	COG0628	permease
AB684_RS17165	COG1959	2 iron, 2 sulfur cluster binding
AB684_RS17170	COG0657	acetylesterase activity
AB684_RS17180	COG1418	mRNA catabolic process
AB684_RS17185	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS17195	COG1511	domain protein
AB684_RS17200	COG0433	COG0433 Predicted ATPase
AB684_RS17200	COG1674	ftsk spoiiie
AB684_RS17205	COG4499	WXG100 protein secretion system (Wss), protein YukC
AB684_RS17210	COG5417	Belongs to the EsaB family
AB684_RS17215	COG4842	Belongs to the WXG100 family
AB684_RS17220	COG1115	amino acid carrier protein
AB684_RS17225	COG2508	Transcriptional regulator
AB684_RS17225	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
AB684_RS17230	COG0686	Belongs to the AlaDH PNT family
AB684_RS17240	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AB684_RS17245	COG1268	BioY protein
AB684_RS17250	COG2056	Na+-H+ antiporter family
AB684_RS17255	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AB684_RS17260	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
AB684_RS17265	COG3584	3D domain protein
AB684_RS17275	COG1252	NADH dehydrogenase
AB684_RS17280	COG0492	ferredoxin-NADP+ reductase activity
AB684_RS17295	COG0456	acetyltransferase
AB684_RS17300	COG0316	Belongs to the HesB IscA family
AB684_RS17305	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AB684_RS17310	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AB684_RS17315	COG4844	belongs to the
AB684_RS17320	COG1252	NADH dehydrogenase
AB684_RS17325	COG5646	InterPro IPR014922
AB684_RS17335	COG0457	Tetratricopeptide repeat
AB684_RS17340	COG3479	Phenolic acid decarboxylase
AB684_RS17350	COG4837	Protein of unknown function (DUF1462)
AB684_RS17355	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AB684_RS17360	COG4946	Tricorn protease homolog
AB684_RS17360	COG0823	Involved in the tonB-independent uptake of proteins
AB684_RS17360	COG1506	peptidase
AB684_RS17365	COG0083	homoserine kinase activity
AB684_RS17370	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AB684_RS17375	COG0460	homoserine dehydrogenase
AB684_RS17385	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AB684_RS17390	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AB684_RS17395	COG0647	UMP catabolic process
AB684_RS17400	COG2445	Protein of unknown function DUF86
AB684_RS17405	COG4470	Protein conserved in bacteria
AB684_RS17420	COG0739	heme binding
AB684_RS17425	COG0733	neurotransmitter:sodium symporter activity
AB684_RS17435	COG3377	Domain of unknown function (DUF1805)
AB684_RS17440	COG0737	Belongs to the 5'-nucleotidase family
AB684_RS17445	COG0730	response to heat
AB684_RS17450	COG1801	Protein of unknown function DUF72
AB684_RS17460	COG3226	Transcriptional regulator
AB684_RS17470	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AB684_RS17475	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AB684_RS17480	COG2508	Transcriptional regulator
AB684_RS17485	COG2814	Major facilitator Superfamily
AB684_RS17490	COG1288	antiporter activity
AB684_RS17495	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AB684_RS17500	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AB684_RS17505	COG2356	endonuclease I
AB684_RS17515	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AB684_RS17530	COG0457	Tetratricopeptide repeat
AB684_RS17535	COG0719	Fe-S assembly protein
AB684_RS17540	COG0822	iron-sulfur transferase activity
AB684_RS17545	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AB684_RS17550	COG0719	Fe-S assembly protein
AB684_RS17555	COG0396	ATPase activity
AB684_RS17565	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AB684_RS17570	COG1464	Belongs to the NlpA lipoprotein family
AB684_RS17575	COG2011	ABC-type metal ion transport system permease component
AB684_RS17580	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AB684_RS17590	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_RS17595	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AB684_RS17605	COG0509	glycine decarboxylation via glycine cleavage system
AB684_RS17610	COG1393	Belongs to the ArsC family
AB684_RS17615	COG1960	acyl-CoA dehydrogenase activity
AB684_RS17620	COG0183	Belongs to the thiolase family
AB684_RS17625	COG1250	3-hydroxyacyl-CoA dehydrogenase
AB684_RS17625	COG1024	Enoyl-CoA hydratase
AB684_RS17635	COG5577	PFAM Coat F domain
AB684_RS17650	COG1120	ATPase activity
AB684_RS17655	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_RS17660	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_RS17665	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_RS17680	COG1686	Belongs to the peptidase S11 family
AB684_RS17685	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS17690	COG0783	Belongs to the Dps family
AB684_RS17695	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AB684_RS17700	COG0745	RESPONSE REGULATOR receiver
AB684_RS17705	COG2205	protein histidine kinase activity
AB684_RS17705	COG2770	Histidine kinase
AB684_RS17710	COG1309	transcriptional regulator
AB684_RS17715	COG0114	fumarate hydratase activity
AB684_RS17720	COG0697	spore germination
AB684_RS17725	COG0814	amino acid
AB684_RS17740	COG2197	response regulator
AB684_RS17745	COG4585	Histidine kinase
AB684_RS17750	COG4758	membrane
AB684_RS17760	COG1842	Phage shock protein A
AB684_RS17765	COG4758	membrane
AB684_RS17770	COG4677	pectinesterase activity
AB684_RS17775	COG2096	Adenosyltransferase
AB684_RS17780	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS17785	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AB684_RS17800	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AB684_RS17805	COG1120	ATPase activity
AB684_RS17810	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_RS17815	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_RS17820	COG1802	Transcriptional regulator
AB684_RS17825	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS17830	COG2258	MOSC domain
AB684_RS17835	COG0583	DNA-binding transcription factor activity
AB684_RS17845	COG2721	sulfolactate sulfo-lyase activity
AB684_RS17850	COG0246	Mannitol dehydrogenase
AB684_RS17855	COG1609	Transcriptional regulator
AB684_RS17860	COG2211	Major facilitator Superfamily
AB684_RS17865	COG1904	glucuronate isomerase
AB684_RS17870	COG2205	protein histidine kinase activity
AB684_RS17875	COG0745	RESPONSE REGULATOR receiver
AB684_RS17880	COG1120	ATPase activity
AB684_RS17885	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_RS17890	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_RS17895	COG0531	amino acid
AB684_RS17905	COG1988	membrane-bound metal-dependent
AB684_RS17910	COG1368	sulfuric ester hydrolase activity
AB684_RS17915	COG2814	Major facilitator Superfamily
AB684_RS17920	COG0656	L-ascorbic acid biosynthetic process
AB684_RS17925	COG1940	carbohydrate kinase activity
AB684_RS17930	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AB684_RS17940	COG3973	AAA domain
AB684_RS17945	COG2860	membrane
AB684_RS17950	COG0456	acetyltransferase
AB684_RS17950	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AB684_RS17955	COG0456	acetyltransferase
AB684_RS17960	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AB684_RS17965	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AB684_RS17970	COG2217	Heavy metal translocating P-type atpase
AB684_RS17975	COG1653	transport
AB684_RS17980	COG1175	transmembrane transport
AB684_RS17985	COG0395	ABC-type sugar transport system, permease component
AB684_RS17990	COG1501	Belongs to the glycosyl hydrolase 31 family
AB684_RS17995	COG1472	Belongs to the glycosyl hydrolase 3 family
AB684_RS18000	COG1121	(ABC) transporter
AB684_RS18005	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AB684_RS18010	COG0803	Belongs to the bacterial solute-binding protein 9 family
AB684_RS18025	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AB684_RS18025	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AB684_RS18030	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_RS18030	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_RS18030	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_RS18045	COG2217	Heavy metal translocating P-type atpase
AB684_RS18050	COG2608	mercury ion transmembrane transporter activity
AB684_RS18055	COG1937	Protein conserved in bacteria
AB684_RS18060	COG0693	protein deglycase activity
AB684_RS18065	COG1349	DNA-binding transcription factor activity
AB684_RS18070	COG1070	Carbohydrate kinase
AB684_RS18075	COG4952	isomerase
AB684_RS18085	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS18085	COG3347	Dehydrogenase
AB684_RS18090	COG2814	Major facilitator Superfamily
AB684_RS18095	COG2814	Major facilitator Superfamily
AB684_RS18105	COG2124	cytochrome p450
AB684_RS18115	COG1846	Transcriptional regulator
AB684_RS18125	COG0673	inositol 2-dehydrogenase activity
AB684_RS18130	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AB684_RS18135	COG1054	Belongs to the UPF0176 family
AB684_RS18145	COG1191	sigma factor activity
AB684_RS18150	COG2140	Oxalate decarboxylase
AB684_RS18190	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AB684_RS18195	COG0557	exoribonuclease II activity
AB684_RS18200	COG1647	Serine aminopeptidase, S33
AB684_RS18205	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AB684_RS18210	COG2002	toxin-antitoxin pair type II binding
AB684_RS18215	COG1476	TRANSCRIPTIONal
AB684_RS18220	COG1396	sequence-specific DNA binding
AB684_RS18225	COG1396	sequence-specific DNA binding
AB684_RS18230	COG1174	glycine betaine transport
AB684_RS18235	COG1732	Glycine betaine
AB684_RS18240	COG1174	glycine betaine transport
AB684_RS18245	COG0517	IMP dehydrogenase activity
AB684_RS18245	COG1125	glycine betaine transport
AB684_RS18250	COG1510	regulation of RNA biosynthetic process
AB684_RS18255	COG2095	MarC family integral membrane protein
AB684_RS18265	COG4640	response to antibiotic
AB684_RS18270	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_RS18280	COG0693	protein deglycase activity
AB684_RS18285	COG0148	phosphopyruvate hydratase activity
AB684_RS18290	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AB684_RS18295	COG0149	triose-phosphate isomerase activity
AB684_RS18300	COG0126	phosphoglycerate kinase activity
AB684_RS18305	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AB684_RS18310	COG2390	Transcriptional regulator
AB684_RS18315	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AB684_RS18320	COG1113	amino acid transport
AB684_RS18340	COG1556	Lactate utilization protein
AB684_RS18345	COG1139	Iron-sulfur cluster binding protein
AB684_RS18350	COG0247	lactate metabolic process
AB684_RS18355	COG2186	Transcriptional regulator
AB684_RS18360	COG1620	l-lactate permease
AB684_RS18365	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AB684_RS18375	COG5039	Polysaccharide pyruvyl transferase
AB684_RS18380	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AB684_RS18385	COG0110	maltose O-acetyltransferase activity
AB684_RS18390	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AB684_RS18395	COG2244	polysaccharide biosynthetic process
AB684_RS18400	COG1216	Glycosyl transferase, family 2
AB684_RS18405	COG5039	Polysaccharide pyruvyl transferase
AB684_RS18410	COG1216	Glycosyl transferase, family 2
AB684_RS18420	COG0438	transferase activity, transferring glycosyl groups
AB684_RS18425	COG1215	transferase activity, transferring glycosyl groups
AB684_RS18430	COG0438	transferase activity, transferring glycosyl groups
AB684_RS18435	COG1086	Polysaccharide biosynthesis protein
AB684_RS18440	COG0489	protein tyrosine kinase activity
AB684_RS18445	COG3944	biosynthesis protein
AB684_RS18450	COG1396	sequence-specific DNA binding
AB684_RS18455	COG2249	NAD(P)H dehydrogenase (quinone) activity
AB684_RS18460	COG2271	Major facilitator Superfamily
AB684_RS18470	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AB684_RS18485	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AB684_RS18495	COG1733	regulation of RNA biosynthetic process
AB684_RS18500	COG1902	pentaerythritol trinitrate reductase activity
AB684_RS18505	COG1621	beta-fructofuranosidase activity
AB684_RS18510	COG1621	beta-fructofuranosidase activity
AB684_RS18525	COG0740	serine-type endopeptidase activity
AB684_RS18530	COG1611	Belongs to the LOG family
AB684_RS18535	COG1694	Mazg nucleotide pyrophosphohydrolase
AB684_RS18545	COG0659	secondary active sulfate transmembrane transporter activity
AB684_RS18550	COG0288	reversible hydration of carbon dioxide
AB684_RS18555	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AB684_RS18560	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AB684_RS18565	COG0640	Transcriptional regulator
AB684_RS18575	COG2732	(Barnase) inhibitor
AB684_RS18580	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AB684_RS18585	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_RS18590	COG1481	regulation of sporulation
AB684_RS18595	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AB684_RS18600	COG1660	Displays ATPase and GTPase activities
AB684_RS18605	COG1051	belongs to the nudix hydrolase family
AB684_RS18615	COG0492	ferredoxin-NADP+ reductase activity
AB684_RS18620	COG0457	Tetratricopeptide repeat
AB684_RS18625	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_RS18630	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AB684_RS18630	COG0140	phosphoribosyl-ATP diphosphatase activity
AB684_RS18635	COG0107	imidazoleglycerol-phosphate synthase activity
AB684_RS18640	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AB684_RS18645	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AB684_RS18650	COG0131	Imidazoleglycerol-phosphate dehydratase
AB684_RS18655	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AB684_RS18660	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AB684_RS18665	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
AB684_RS18670	COG4990	cell redox homeostasis
AB684_RS18675	COG5297	Belongs to the glycosyl hydrolase family 6
AB684_RS18680	COG0110	maltose O-acetyltransferase activity
AB684_RS18685	COG0546	phosphoglycolate phosphatase activity
AB684_RS18690	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
AB684_RS18695	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AB684_RS18700	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AB684_RS18705	COG1846	Transcriptional regulator
AB684_RS18710	COG2814	Major facilitator Superfamily
AB684_RS18715	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AB684_RS18720	COG1950	PFAM Membrane protein of
AB684_RS18725	COG1983	PspC domain protein
AB684_RS18730	COG3595	metallopeptidase activity
AB684_RS18755	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AB684_RS18760	COG0556	nucleotide-excision repair
AB684_RS18765	COG4897	Protein conserved in bacteria
AB684_RS18775	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AB684_RS18785	COG3409	Peptidoglycan-binding domain 1 protein
AB684_RS18785	COG0793	Belongs to the peptidase S41A family
AB684_RS18790	COG0473	3-isopropylmalate dehydrogenase activity
AB684_RS18795	COG0791	NLP P60 protein
AB684_RS18795	COG3883	PFAM NLP P60 protein
AB684_RS18800	COG2177	Part of the ABC transporter FtsEX involved in
AB684_RS18805	COG2884	Cell division ATP-binding protein ftsE
AB684_RS18815	COG2010	Cytochrome c
AB684_RS18820	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_RS18825	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AB684_RS18830	COG0653	protein targeting
AB684_RS18835	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AB684_RS18850	COG1516	flagellar protein fliS
AB684_RS18855	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
AB684_RS18860	COG1334	flagellar protein FlaG
AB684_RS18865	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AB684_RS18870	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AB684_RS18875	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
AB684_RS18885	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AB684_RS18890	COG1256	bacterial-type flagellum assembly
AB684_RS18890	COG4786	Flagellar basal body rod
AB684_RS18895	COG3418	PFAM FlgN family protein
AB684_RS18900	COG2747	anti-sigma28 factor FlgM
AB684_RS18910	COG1040	competence protein
AB684_RS18920	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
AB684_RS18925	COG1307	EDD domain protein, DegV family
AB684_RS18930	COG2197	response regulator
AB684_RS18935	COG4585	Histidine kinase
AB684_RS18940	COG1739	Uncharacterized protein family UPF0029
AB684_RS18945	COG1316	TRANSCRIPTIONal
AB684_RS18955	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AB684_RS18960	COG0438	transferase activity, transferring glycosyl groups
AB684_RS18965	COG1215	transferase activity, transferring glycosyl groups
AB684_RS18970	COG3206	protein involved in exopolysaccharide biosynthesis
AB684_RS18975	COG3307	-O-antigen
AB684_RS18980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AB684_RS18985	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AB684_RS18990	COG0297	glycogen (starch) synthase activity
AB684_RS18990	COG0438	transferase activity, transferring glycosyl groups
AB684_RS18995	COG2244	polysaccharide biosynthetic process
AB684_RS19005	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_RS19005	COG2247	cell wall binding repeat
AB684_RS19010	COG2385	sporulation resulting in formation of a cellular spore
AB684_RS19010	COG2247	cell wall binding repeat
AB684_RS19020	COG1316	TRANSCRIPTIONal
AB684_RS19025	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AB684_RS19030	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AB684_RS19035	COG1134	teichoic acid transport
AB684_RS19040	COG1682	transport, permease protein
AB684_RS19045	COG0463	Glycosyl transferase, family 2
AB684_RS19045	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AB684_RS19050	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AB684_RS19055	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AB684_RS19060	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
AB684_RS19065	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AB684_RS19070	COG4193	domain, Protein
AB684_RS19075	COG1482	cell wall glycoprotein biosynthetic process
AB684_RS19095	COG0800	Aldolase
AB684_RS19100	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AB684_RS19105	COG1609	Transcriptional regulator
AB684_RS19110	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
AB684_RS19115	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS19120	COG1063	alcohol dehydrogenase
AB684_RS19125	COG2814	Major facilitator Superfamily
AB684_RS19130	COG1316	TRANSCRIPTIONal
AB684_RS19135	COG0561	phosphatase activity
AB684_RS19140	COG0791	NLP P60 protein
AB684_RS19145	COG2843	Capsule synthesis protein
AB684_RS19155	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AB684_RS19160	COG1609	Transcriptional regulator
AB684_RS19165	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AB684_RS19170	COG1869	D-ribose catabolic process
AB684_RS19175	COG1129	ABC transporter
AB684_RS19180	COG1172	Belongs to the binding-protein-dependent transport system permease family
AB684_RS19185	COG1879	ABC-type sugar transport system periplasmic component
AB684_RS19195	COG3527	Alpha-acetolactate decarboxylase
AB684_RS19200	COG0028	Belongs to the TPP enzyme family
AB684_RS19205	COG0583	DNA-binding transcription factor activity
AB684_RS19210	COG2801	Transposase and inactivated derivatives
AB684_RS19220	COG0405	Gamma-glutamyltransferase
AB684_RS19225	COG1522	sequence-specific DNA binding
AB684_RS19230	COG2059	Chromate
AB684_RS19235	COG2059	Chromate
AB684_RS19240	COG4464	protein tyrosine phosphatase activity
AB684_RS19245	COG3944	biosynthesis protein
AB684_RS19250	COG4715	Zinc finger, swim domain protein
AB684_RS19255	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AB684_RS19260	COG0561	phosphatase activity
AB684_RS19265	COG1349	DNA-binding transcription factor activity
AB684_RS19275	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS19285	COG3732	PTS system glucitol sorbitol-specific
AB684_RS19305	COG0629	single-stranded DNA binding
AB684_RS19320	COG1970	mechanosensitive ion channel activity
AB684_RS19325	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AB684_RS19330	COG4786	Flagellar basal body rod
AB684_RS19335	COG4786	Flagellar basal body rod
AB684_RS19340	COG1077	Cell shape determining protein MreB Mrl
AB684_RS19345	COG1609	Transcriptional regulator
AB684_RS19350	COG1846	Transcriptional regulator
AB684_RS19355	COG2814	Major facilitator Superfamily
AB684_RS19360	COG0671	phosphoesterase, PA-phosphatase related
AB684_RS19365	COG1227	inorganic diphosphatase activity
AB684_RS19370	COG3546	catalase activity
AB684_RS19375	COG3361	conserved protein (COG2071)
AB684_RS19380	COG0517	IMP dehydrogenase activity
AB684_RS19385	COG0598	Magnesium transport protein CorA
AB684_RS19390	COG1253	flavin adenine dinucleotide binding
AB684_RS19395	COG0004	ammonium transporteR
AB684_RS19400	COG0347	Belongs to the P(II) protein family
AB684_RS19405	COG0740	serine-type endopeptidase activity
AB684_RS19415	COG0739	heme binding
AB684_RS19420	COG1247	-acetyltransferase
AB684_RS19430	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AB684_RS19435	COG0477	Major facilitator Superfamily
AB684_RS19440	COG3251	PFAM MbtH domain protein
AB684_RS19445	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AB684_RS19450	COG1535	isochorismatase
AB684_RS19450	COG3433	isochorismatase activity
AB684_RS19455	COG1021	2,3-dihydroxybenzoate-AMP ligase
AB684_RS19460	COG1169	isochorismate synthase
AB684_RS19465	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_RS19470	COG2819	hydrolase of the alpha beta superfamily
AB684_RS19475	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_RS19480	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_RS19485	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_RS19490	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_RS19490	COG2207	Transcriptional regulator
AB684_RS19500	COG2910	NAD(P)H-binding
AB684_RS19505	COG1959	2 iron, 2 sulfur cluster binding
AB684_RS19510	COG1994	Peptidase M50
AB684_RS19515	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AB684_RS19520	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AB684_RS19525	COG2223	nitrite transmembrane transporter activity
AB684_RS19530	COG3383	formate dehydrogenase (NAD+) activity
AB684_RS19535	COG2304	oxidoreductase activity
AB684_RS19540	COG2304	oxidoreductase activity
AB684_RS19545	COG2385	sporulation resulting in formation of a cellular spore
AB684_RS19550	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AB684_RS19560	COG4836	Membrane
AB684_RS19565	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AB684_RS19570	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AB684_RS19575	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AB684_RS19580	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AB684_RS19585	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AB684_RS19590	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AB684_RS19595	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AB684_RS19615	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AB684_RS19620	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AB684_RS19625	COG4475	Protein of unknown function (DUF436)
AB684_RS19630	COG0698	ribose 5-phosphate isomerase
AB684_RS19635	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AB684_RS19640	COG1971	Probably functions as a manganese efflux pump
AB684_RS19645	COG0009	L-threonylcarbamoyladenylate synthase
AB684_RS19650	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AB684_RS19660	COG0738	Major facilitator superfamily
AB684_RS19665	COG0673	inositol 2-dehydrogenase activity
AB684_RS19670	COG0561	phosphatase activity
AB684_RS19675	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AB684_RS19680	COG1609	Transcriptional regulator
AB684_RS19685	COG2890	protein-(glutamine-N5) methyltransferase activity
AB684_RS19690	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AB684_RS19695	COG0346	lactoylglutathione lyase activity
AB684_RS19700	COG0789	Transcriptional regulator
AB684_RS19705	COG0679	Auxin Efflux Carrier
AB684_RS19710	COG0281	malic enzyme
AB684_RS19715	COG1435	thymidine kinase activity
AB684_RS19720	COG0254	rRNA binding
AB684_RS19725	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AB684_RS19730	COG1494	fructose-1,6-bisphosphatase
AB684_RS19735	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AB684_RS19740	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AB684_RS19745	COG0191	fructose-bisphosphate aldolase activity
AB684_RS19750	COG2204	response regulator
AB684_RS19755	COG4821	SIS domain
AB684_RS19760	COG0504	CTP synthase activity
AB684_RS19765	COG3343	RNA polymerase activity
AB684_RS19770	COG1960	acyl-CoA dehydrogenase activity
AB684_RS19775	COG1960	acyl-CoA dehydrogenase activity
AB684_RS19780	COG1250	3-hydroxyacyl-CoA dehydrogenase
AB684_RS19785	COG0183	Belongs to the thiolase family
AB684_RS19790	COG2181	nitrate reductase activity
AB684_RS19790	COG0247	lactate metabolic process
AB684_RS19795	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AB684_RS19805	COG0018	arginyl-trna synthetase
AB684_RS19810	COG4506	Protein conserved in bacteria
AB684_RS19815	COG0010	Belongs to the arginase family
AB684_RS19820	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
AB684_RS19835	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AB684_RS19845	COG1994	Peptidase M50
AB684_RS19850	COG1942	4-Oxalocrotonate Tautomerase
AB684_RS19860	COG3465	dGTPase activity
AB684_RS19865	COG1078	dGTPase activity
AB684_RS19870	COG4844	belongs to the
AB684_RS19895	COG2814	Major facilitator Superfamily
AB684_RS19920	COG1414	Transcriptional regulator
AB684_RS19930	COG0280	phosphate acetyltransferase
AB684_RS19935	COG3253	May function as heme-dependent peroxidase
AB684_RS19950	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AB684_RS19970	COG1131	(ABC) transporter
AB684_RS19985	COG2363	Small membrane protein
AB684_RS19990	COG2233	PERMEase
AB684_RS20000	COG1012	belongs to the aldehyde dehydrogenase family
AB684_RS20005	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AB684_RS20010	COG1216	Glycosyl transferase, family 2
AB684_RS20015	COG0351	phosphomethylpyrimidine kinase
AB684_RS20025	COG1621	beta-fructofuranosidase activity
AB684_RS20030	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS20030	COG1263	PTS System
AB684_RS20035	COG3711	transcriptional antiterminator
AB684_RS20045	COG1404	Belongs to the peptidase S8 family
AB684_RS20055	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AB684_RS20060	COG0778	Nitroreductase
AB684_RS20065	COG1473	amidohydrolase
AB684_RS20070	COG0772	Belongs to the SEDS family
AB684_RS20075	COG0772	Belongs to the SEDS family
AB684_RS20080	COG3314	Sporulation integral membrane protein YlbJ
AB684_RS20100	COG0456	acetyltransferase
AB684_RS20135	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AB684_RS20145	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AB684_RS20150	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AB684_RS20155	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AB684_RS20175	COG3162	membrane
AB684_RS20180	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_RS20185	COG1070	Carbohydrate kinase
AB684_RS20190	COG2115	Belongs to the xylose isomerase family
AB684_RS20200	COG0352	thiamine-phosphate diphosphorylase activity
AB684_RS20205	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
AB684_RS20210	COG0583	DNA-binding transcription factor activity
AB684_RS20225	COG1380	Effector of murein hydrolase LrgA
AB684_RS20230	COG1346	cytolysis
AB684_RS20240	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_RS20245	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AB684_RS20250	COG0346	lactoylglutathione lyase activity
AB684_RS20255	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AB684_RS20260	COG1442	glycosyl transferase family 8
AB684_RS20265	COG4585	Histidine kinase
AB684_RS20270	COG2197	response regulator
AB684_RS20275	COG2409	Drug exporters of the RND superfamily
AB684_RS20280	COG5522	Integral membrane protein (intg_mem_TP0381)
AB684_RS20285	COG2271	Major facilitator Superfamily
AB684_RS20290	COG4948	Mandelate Racemase Muconate Lactonizing
AB684_RS20295	COG0800	Aldolase
AB684_RS20300	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AB684_RS20310	COG2234	aminopeptidase activity
AB684_RS20315	COG0477	Major facilitator Superfamily
AB684_RS20325	COG2357	RelA SpoT domain protein
AB684_RS20340	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AB684_RS20345	COG1696	Membrane protein involved in D-alanine export
AB684_RS20350	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AB684_RS20355	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AB684_RS20360	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AB684_RS20365	COG2814	Major facilitator Superfamily
AB684_RS20370	COG1486	melibiose metabolic process
AB684_RS20375	COG1447	Phosphotransferase system cellobiose-specific component IIA
AB684_RS20380	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_RS20385	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_RS20390	COG3711	transcriptional antiterminator
AB684_RS20390	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_RS20395	COG2094	Belongs to the DNA glycosylase MPG family
AB684_RS20405	COG0372	Belongs to the citrate synthase family
AB684_RS20410	COG2079	MmgE PrpD family protein
AB684_RS20415	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AB684_RS20430	COG1132	(ABC) transporter
AB684_RS20435	COG2755	lipolytic protein G-D-S-L family
AB684_RS20450	COG2814	Major facilitator Superfamily
AB684_RS20455	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AB684_RS20460	COG1131	(ABC) transporter
AB684_RS20480	COG1595	DNA-templated transcription, initiation
AB684_RS20485	COG2814	Major facilitator Superfamily
AB684_RS20490	COG0753	catalase activity
AB684_RS20495	COG0753	catalase activity
AB684_RS20500	COG0735	belongs to the Fur family
AB684_RS20505	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AB684_RS20510	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AB684_RS20515	COG1131	(ABC) transporter
AB684_RS20530	COG1131	(ABC) transporter
AB684_RS20585	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AB684_RS20590	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AB684_RS20595	COG4988	ABC transporter
AB684_RS20600	COG1294	oxidase, subunit
AB684_RS20605	COG1271	oxidase subunit
AB684_RS20615	COG2116	formate transmembrane transporter activity
AB684_RS20625	COG0281	malic enzyme
AB684_RS20630	COG1757	Na H antiporter
AB684_RS20635	COG1027	Aspartate ammonia-lyase
AB684_RS20640	COG0252	asparaginase activity
AB684_RS20645	COG1396	sequence-specific DNA binding
AB684_RS20650	COG2706	6-phosphogluconolactonase activity
AB684_RS20655	COG0745	RESPONSE REGULATOR receiver
AB684_RS20660	COG2205	protein histidine kinase activity
AB684_RS20670	COG1136	(ABC) transporter
AB684_RS20675	COG0577	efflux transmembrane transporter activity
AB684_RS20680	COG5294	Protein conserved in bacteria
AB684_RS20690	COG0726	polysaccharide deacetylase
AB684_RS20700	COG1215	transferase activity, transferring glycosyl groups
AB684_RS20705	COG3493	citrate carrier protein
AB684_RS20710	COG0584	glycerophosphoryl diester phosphodiesterase
AB684_RS20725	COG1368	sulfuric ester hydrolase activity
AB684_RS20735	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_RS20750	COG2235	arginine
AB684_RS20755	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AB684_RS20765	COG0549	Belongs to the carbamate kinase family
AB684_RS20775	COG2723	6-phospho-beta-galactosidase activity
AB684_RS20780	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_RS20790	COG1595	DNA-templated transcription, initiation
AB684_RS20815	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AB684_RS20820	COG2195	Cleaves the N-terminal amino acid of tripeptides
AB684_RS20830	COG1621	beta-fructofuranosidase activity
AB684_RS20835	COG2223	nitrite transmembrane transporter activity
AB684_RS20845	COG1609	Transcriptional regulator
AB684_RS20860	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AB684_RS20865	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AB684_RS20870	COG0463	Glycosyl transferase, family 2
AB684_RS20875	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AB684_RS20885	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AB684_RS20890	COG0693	protein deglycase activity
AB684_RS20890	COG0753	catalase activity
AB684_RS20900	COG2723	6-phospho-beta-galactosidase activity
AB684_RS20905	COG1263	PTS System
AB684_RS20905	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS20905	COG2190	(PTS) system
AB684_RS20910	COG3711	transcriptional antiterminator
AB684_RS20915	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AB684_RS20920	COG1122	ATPase activity
AB684_RS20925	COG4721	ABC-type cobalt transport system, permease component
AB684_RS20930	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AB684_RS20935	COG2224	Isocitrate lyase
AB684_RS20940	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AB684_RS20945	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AB684_RS20950	COG0577	efflux transmembrane transporter activity
AB684_RS20955	COG1136	(ABC) transporter
AB684_RS20960	COG2205	protein histidine kinase activity
AB684_RS20965	COG0745	RESPONSE REGULATOR receiver
AB684_RS20970	COG2723	6-phospho-beta-galactosidase activity
AB684_RS20975	COG1263	PTS System
AB684_RS20975	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS20975	COG2190	(PTS) system
AB684_RS20985	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
AB684_RS20990	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AB684_RS20995	COG3507	Belongs to the glycosyl hydrolase 43 family
AB684_RS21000	COG0513	Belongs to the DEAD box helicase family
AB684_RS21030	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AB684_RS21035	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AB684_RS21040	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AB684_RS21045	COG2390	Transcriptional regulator
AB684_RS21055	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AB684_RS21060	COG3706	GGDEF domain
AB684_RS21065	COG5298	Protein conserved in bacteria
AB684_RS21070	COG1215	transferase activity, transferring glycosyl groups
AB684_RS21080	COG3977	Valine--pyruvate aminotransferase
AB684_RS21095	COG1181	Belongs to the D-alanine--D-alanine ligase family
AB684_RS21105	COG0191	fructose-bisphosphate aldolase activity
AB684_RS21110	COG1082	Xylose isomerase domain protein TIM barrel
AB684_RS21115	COG1082	Xylose isomerase domain protein TIM barrel
AB684_RS21120	COG0673	inositol 2-dehydrogenase activity
AB684_RS21125	COG2814	Major facilitator Superfamily
AB684_RS21130	COG1082	Xylose isomerase domain protein TIM barrel
AB684_RS21135	COG3962	Belongs to the TPP enzyme family
AB684_RS21140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AB684_RS21145	COG3718	enzyme involved in inositol metabolism
AB684_RS21150	COG1012	belongs to the aldehyde dehydrogenase family
AB684_RS21155	COG1349	DNA-binding transcription factor activity
AB684_RS21160	COG0667	Aldo Keto reductase
AB684_RS21170	COG2271	Major facilitator Superfamily
AB684_RS21175	COG0326	Molecular chaperone. Has ATPase activity
AB684_RS21180	COG0488	(ABC) transporter
AB684_RS21185	COG0561	phosphatase activity
AB684_RS21205	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_RS21235	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
AB684_RS21240	COG0577	efflux transmembrane transporter activity
AB684_RS21245	COG1136	(ABC) transporter
AB684_RS21250	COG2205	protein histidine kinase activity
AB684_RS21255	COG0745	RESPONSE REGULATOR receiver
AB684_RS21265	COG5278	phosphoserine phosphatase activity
AB684_RS21265	COG0840	transmembrane signaling receptor activity
AB684_RS21270	COG1115	amino acid carrier protein
AB684_RS21275	COG0686	Belongs to the AlaDH PNT family
AB684_RS21280	COG3867	Arabinogalactan endo-beta-1,4-galactanase
AB684_RS21285	COG1874	Beta-galactosidase
AB684_RS21290	COG3833	ABC-type maltose transport systems, permease component
AB684_RS21295	COG1175	transmembrane transport
AB684_RS21300	COG2182	Extracellular solute-binding protein
AB684_RS21305	COG1609	Transcriptional regulator
AB684_RS21315	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AB684_RS21320	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
AB684_RS21325	COG1940	carbohydrate kinase activity
AB684_RS21350	COG1454	alcohol dehydrogenase
AB684_RS21350	COG1012	belongs to the aldehyde dehydrogenase family
AB684_RS21355	COG0450	alkyl hydroperoxide reductase
AB684_RS21360	COG3634	alkyl hydroperoxide reductase activity
AB684_RS21385	COG1131	(ABC) transporter
AB684_RS21390	COG0842	Transport permease protein
AB684_RS21400	COG2197	response regulator
AB684_RS21425	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AB684_RS21435	COG0456	acetyltransferase
AB684_RS21450	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AB684_RS21455	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AB684_RS21460	COG4853	Protein conserved in bacteria
AB684_RS21465	COG4863	YycH protein
AB684_RS21470	COG5002	protein histidine kinase activity
AB684_RS21475	COG0745	RESPONSE REGULATOR receiver
AB684_RS21500	COG1051	belongs to the nudix hydrolase family
AB684_RS21505	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AB684_RS21515	COG0305	Participates in initiation and elongation during chromosome replication
AB684_RS21530	COG2807	transmembrane transport
AB684_RS21535	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AB684_RS21540	COG0363	glucosamine-6-phosphate deaminase activity
AB684_RS21545	COG2188	Transcriptional regulator
AB684_RS21550	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AB684_RS21555	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_RS21555	COG1263	PTS System
AB684_RS21560	COG0359	binds to the 23S rRNA
AB684_RS21565	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
AB684_RS21570	COG4241	membrane
AB684_RS21575	COG5577	PFAM Coat F domain
AB684_RS21580	COG0589	response to stress
AB684_RS21585	COG0659	secondary active sulfate transmembrane transporter activity
AB684_RS21590	COG2271	Major facilitator Superfamily
AB684_RS21595	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AB684_RS21600	COG0629	single-stranded DNA binding
AB684_RS21605	COG0360	Binds together with S18 to 16S ribosomal RNA
AB684_RS21610	COG0012	GTP binding
AB684_RS21620	COG4481	Protein conserved in bacteria
AB684_RS21625	COG3949	Membrane
AB684_RS21635	COG1475	DNA binding
AB684_RS21640	COG1192	Involved in chromosome partitioning
AB684_RS21645	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AB684_RS21655	COG1475	DNA binding
AB684_RS21660	COG0357	Ribosomal RNA small subunit methyltransferase G
AB684_RS21665	COG0445	tRNA wobble uridine modification
AB684_RS21670	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AB684_RS21675	COG1847	R3H domain protein
AB684_RS21680	COG0706	membrane insertase activity
AB684_RS21685	COG0594	ribonuclease P activity