locus-tag class description GII88_RS00005 PF11638 DnaA N-terminal domain GII88_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix GII88_RS00005 PF00308 Bacterial dnaA protein GII88_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GII88_RS00010 PF02767 DNA polymerase III beta subunit, central domain GII88_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GII88_RS00020 PF02463 RecF/RecN/SMC N terminal domain GII88_RS00025 PF04025 Domain of unknown function (DUF370) GII88_RS00030 PF00204 DNA gyrase B GII88_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus GII88_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS00030 PF01751 Toprim domain GII88_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A GII88_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller GII88_RS00065 PF14175 YaaC-like Protein GII88_RS00070 PF00571 CBS domain GII88_RS00070 PF00478 IMP dehydrogenase / GMP reductase domain GII88_RS00075 PF00768 D-alanyl-D-alanine carboxypeptidase GII88_RS00075 PF07943 Penicillin-binding protein 5, C-terminal domain GII88_RS00080 PF01680 SOR/SNZ family GII88_RS00085 PF01174 SNO glutamine amidotransferase family GII88_RS00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII88_RS00090 PF02403 Seryl-tRNA synthetase N-terminal domain GII88_RS00100 PF02595 Glycerate kinase family GII88_RS00105 PF02447 GntP family permease GII88_RS00110 PF17853 GGDEF-like domain GII88_RS00110 PF13556 PucR C-terminal helix-turn-helix domain GII88_RS00110 PF05651 Putative sugar diacid recognition GII88_RS00125 PF01712 Deoxynucleoside kinase GII88_RS00130 PF01712 Deoxynucleoside kinase GII88_RS00135 PF00704 Glycosyl hydrolases family 18 GII88_RS00135 PF01476 LysM domain GII88_RS00140 PF00857 Isochorismatase family GII88_RS00145 PF14437 MafB19-like deaminase GII88_RS00155 PF12169 DNA polymerase III subunits gamma and tau domain III GII88_RS00160 PF02575 YbaB/EbfC DNA-binding family GII88_RS00165 PF02132 RecR protein GII88_RS00165 PF13662 Toprim domain GII88_RS00170 PF10704 Protein of unknown function (DUF2508) GII88_RS00175 PF07441 SigmaK-factor processing regulatory protein BofA GII88_RS00205 PF10764 Inhibitor of sigma-G Gin GII88_RS00210 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein GII88_RS00215 PF05816 Toxic anion resistance protein (TelA) GII88_RS00220 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GII88_RS00220 PF01276 Orn/Lys/Arg decarboxylase, major domain GII88_RS00225 PF02223 Thymidylate kinase GII88_RS00230 PF06153 Cyclic-di-AMP receptor GII88_RS00235 PF03885 Protein of unknown function (DUF327) GII88_RS00240 PF09115 DNA polymerase III, delta subunit, C terminal GII88_RS00245 PF04468 PSP1 C-terminal conserved region GII88_RS00250 PF06156 Initiation control protein YabA GII88_RS00255 PF05175 Methyltransferase small domain GII88_RS00260 PF01541 GIY-YIG catalytic domain GII88_RS00265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII88_RS00270 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII88_RS00270 PF18277 AbrB C-terminal domain GII88_RS00275 PF01588 Putative tRNA binding domain GII88_RS00275 PF09334 tRNA synthetases class I (M) GII88_RS00275 PF08264 Anticodon-binding domain of tRNA GII88_RS00280 PF01026 TatD related DNase GII88_RS00285 PF06725 3D domain GII88_RS00285 PF07501 G5 domain GII88_RS00285 PF03990 G5-linked-Ubiquitin-like domain GII88_RS00290 PF13331 Domain of unknown function (DUF4093) GII88_RS00290 PF13662 Toprim domain GII88_RS00295 PF00398 Ribosomal RNA adenine dimethylase GII88_RS00300 PF05582 YabG peptidase U57 GII88_RS00305 PF06257 Biofilm formation stimulator VEG GII88_RS00310 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII88_RS00315 PF00288 GHMP kinases N terminal domain GII88_RS00315 PF08544 GHMP kinases C terminal GII88_RS00320 PF09182 Bacterial purine repressor, N-terminal GII88_RS00320 PF00156 Phosphoribosyl transferase domain GII88_RS00325 PF01042 Endoribonuclease L-PSP GII88_RS00330 PF04026 SpoVG GII88_RS00335 PF00483 Nucleotidyl transferase GII88_RS00335 PF00132 Bacterial transferase hexapeptide (six repeats) GII88_RS00340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GII88_RS00340 PF14572 Phosphoribosyl synthetase-associated domain GII88_RS00345 PF01386 Ribosomal L25p family GII88_RS00345 PF14693 Ribosomal protein TL5, C-terminal domain GII88_RS00350 PF01195 Peptidyl-tRNA hydrolase GII88_RS00355 PF10955 Protein of unknown function (DUF2757) GII88_RS00360 PF00270 DEAD/DEAH box helicase GII88_RS00360 PF00271 Helicase conserved C-terminal domain GII88_RS00360 PF03461 TRCF domain GII88_RS00360 PF17757 UvrB interaction domain GII88_RS00360 PF02559 CarD-like/TRCF domain GII88_RS00365 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII88_RS00365 PF15714 Stage V sporulation protein T C-terminal, transcription factor GII88_RS00370 PF01943 Polysaccharide biosynthesis protein GII88_RS00370 PF14667 Polysaccharide biosynthesis C-terminal domain GII88_RS00375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII88_RS00375 PF03819 MazG nucleotide pyrophosphohydrolase domain GII88_RS00380 PF01479 S4 domain GII88_RS00385 PF07873 YabP family GII88_RS00390 PF09578 Spore cortex protein YabQ (Spore_YabQ) GII88_RS00395 PF04977 Septum formation initiator GII88_RS00400 PF00575 S1 RNA binding domain GII88_RS00415 PF07228 Stage II sporulation protein E (SpoIIE) GII88_RS00420 PF00092 von Willebrand factor type A domain GII88_RS00425 PF00069 Protein kinase domain GII88_RS00430 PF11734 TilS substrate C-terminal domain GII88_RS00430 PF09179 TilS substrate binding domain GII88_RS00430 PF01171 PP-loop family GII88_RS00435 PF00156 Phosphoribosyl transferase domain GII88_RS00440 PF01434 Peptidase family M41 GII88_RS00440 PF06480 FtsH Extracellular GII88_RS00440 PF17862 AAA+ lid domain GII88_RS00440 PF00004 ATPase family associated with various cellular activities (AAA) GII88_RS00445 PF03309 Type III pantothenate kinase GII88_RS00450 PF01430 Hsp33 protein GII88_RS00455 PF13145 PPIC-type PPIASE domain GII88_RS00460 PF00291 Pyridoxal-phosphate dependent enzyme GII88_RS00470 PF04715 Anthranilate synthase component I, N terminal region GII88_RS00470 PF00425 chorismate binding enzyme GII88_RS00475 PF00117 Glutamine amidotransferase class-I GII88_RS00480 PF01063 Amino-transferase class IV GII88_RS00485 PF00809 Pterin binding enzyme GII88_RS00490 PF02152 Dihydroneopterin aldolase GII88_RS00495 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GII88_RS00500 PF01381 Helix-turn-helix GII88_RS00505 PF01207 Dihydrouridine synthase (Dus) GII88_RS00510 PF00152 tRNA synthetases class II (D, K and N) GII88_RS00510 PF01336 OB-fold nucleic acid binding domain GII88_RS00590 PF05848 CtsR N-terminal HTH domain GII88_RS00590 PF17727 CtsR C-terminal dimerization domain GII88_RS00595 PF02151 UvrB/uvrC motif GII88_RS00600 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain GII88_RS00605 PF10431 C-terminal, D2-small domain, of ClpB protein GII88_RS00605 PF02861 Clp amino terminal domain, pathogenicity island component GII88_RS00605 PF17871 AAA lid domain GII88_RS00605 PF07724 AAA domain (Cdc48 subfamily) GII88_RS00605 PF00004 ATPase family associated with various cellular activities (AAA) GII88_RS00610 PF18073 Rubredoxin metal binding domain GII88_RS00615 PF10635 DisA bacterial checkpoint controller linker region GII88_RS00615 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII88_RS00625 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GII88_RS00630 PF02542 YgbB family GII88_RS00635 PF00749 tRNA synthetases class I (E and Q), catalytic domain GII88_RS00640 PF00132 Bacterial transferase hexapeptide (six repeats) GII88_RS00645 PF09190 DALR domain GII88_RS00645 PF01406 tRNA synthetases class I (C) catalytic domain GII88_RS00650 PF00636 Ribonuclease III domain GII88_RS00655 PF00588 SpoU rRNA Methylase family GII88_RS00655 PF08032 RNA 2'-O ribose methyltransferase substrate binding GII88_RS00660 PF05991 YacP-like NYN domain GII88_RS00665 PF08281 Sigma-70, region 4 GII88_RS00665 PF04542 Sigma-70 region 2 GII88_RS00670 PF00471 Ribosomal protein L33 GII88_RS00675 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GII88_RS00680 PF02357 Transcription termination factor nusG GII88_RS00680 PF00467 KOW motif GII88_RS00685 PF00298 Ribosomal protein L11, RNA binding domain GII88_RS00685 PF03946 Ribosomal protein L11, N-terminal domain GII88_RS00690 PF00687 Ribosomal protein L1p/L10e family GII88_RS00695 PF00466 Ribosomal protein L10 GII88_RS00700 PF16320 Ribosomal protein L7/L12 dimerisation domain GII88_RS00700 PF00542 Ribosomal protein L7/L12 C-terminal domain GII88_RS00705 PF05175 Methyltransferase small domain GII88_RS00710 PF04565 RNA polymerase Rpb2, domain 3 GII88_RS00710 PF00562 RNA polymerase Rpb2, domain 6 GII88_RS00710 PF04563 RNA polymerase beta subunit GII88_RS00710 PF04561 RNA polymerase Rpb2, domain 2 GII88_RS00710 PF10385 RNA polymerase beta subunit external 1 domain GII88_RS00710 PF04560 RNA polymerase Rpb2, domain 7 GII88_RS00715 PF04998 RNA polymerase Rpb1, domain 5 GII88_RS00715 PF05000 RNA polymerase Rpb1, domain 4 GII88_RS00715 PF04983 RNA polymerase Rpb1, domain 3 GII88_RS00715 PF00623 RNA polymerase Rpb1, domain 2 GII88_RS00715 PF04997 RNA polymerase Rpb1, domain 1 GII88_RS00720 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GII88_RS00725 PF00164 Ribosomal protein S12/S23 GII88_RS00730 PF00177 Ribosomal protein S7p/S5e GII88_RS00735 PF03764 Elongation factor G, domain IV GII88_RS00735 PF00009 Elongation factor Tu GTP binding domain GII88_RS00735 PF03144 Elongation factor Tu domain 2 GII88_RS00735 PF14492 Elongation Factor G, domain II GII88_RS00735 PF00679 Elongation factor G C-terminus GII88_RS00740 PF03144 Elongation factor Tu domain 2 GII88_RS00740 PF03143 Elongation factor Tu C-terminal domain GII88_RS00740 PF00009 Elongation factor Tu GTP binding domain GII88_RS00745 PF00338 Ribosomal protein S10p/S20e GII88_RS00750 PF00297 Ribosomal protein L3 GII88_RS00755 PF00573 Ribosomal protein L4/L1 family GII88_RS00760 PF00276 Ribosomal protein L23 GII88_RS00765 PF00181 Ribosomal Proteins L2, RNA binding domain GII88_RS00765 PF03947 Ribosomal Proteins L2, C-terminal domain GII88_RS00770 PF00203 Ribosomal protein S19 GII88_RS00775 PF00237 Ribosomal protein L22p/L17e GII88_RS00780 PF00189 Ribosomal protein S3, C-terminal domain GII88_RS00780 PF07650 KH domain GII88_RS00785 PF00252 Ribosomal protein L16p/L10e GII88_RS00790 PF00831 Ribosomal L29 protein GII88_RS00795 PF00366 Ribosomal protein S17 GII88_RS00800 PF00238 Ribosomal protein L14p/L23e GII88_RS00805 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GII88_RS00805 PF00467 KOW motif GII88_RS00810 PF00281 Ribosomal protein L5 GII88_RS00810 PF00673 ribosomal L5P family C-terminus GII88_RS00815 PF00253 Ribosomal protein S14p/S29e GII88_RS00820 PF00410 Ribosomal protein S8 GII88_RS00825 PF00347 Ribosomal protein L6 GII88_RS00830 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GII88_RS00835 PF00333 Ribosomal protein S5, N-terminal domain GII88_RS00835 PF03719 Ribosomal protein S5, C-terminal domain GII88_RS00840 PF00327 Ribosomal protein L30p/L7e GII88_RS00845 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GII88_RS00850 PF00344 SecY translocase GII88_RS00855 PF05191 Adenylate kinase, active site lid GII88_RS00860 PF00557 Metallopeptidase family M24 GII88_RS00870 PF01176 Translation initiation factor 1A / IF-1 GII88_RS00875 PF00444 Ribosomal protein L36 GII88_RS00880 PF00416 Ribosomal protein S13/S18 GII88_RS00885 PF00411 Ribosomal protein S11 GII88_RS00890 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GII88_RS00890 PF01000 RNA polymerase Rpb3/RpoA insert domain GII88_RS00890 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GII88_RS00895 PF01196 Ribosomal protein L17 GII88_RS00900 PF00005 ABC transporter GII88_RS00905 PF00005 ABC transporter GII88_RS00910 PF02361 Cobalt transport protein GII88_RS00915 PF01416 tRNA pseudouridine synthase GII88_RS00920 PF00572 Ribosomal protein L13 GII88_RS00925 PF00380 Ribosomal protein S9/S16 GII88_RS00930 PF05163 DinB family GII88_RS00935 PF10730 Protein of unknown function (DUF2521) GII88_RS00940 PF01520 N-acetylmuramoyl-L-alanine amidase GII88_RS00945 PF10609 NUBPL iron-transfer P-loop NTPase GII88_RS00950 PF17898 Spore germination GerD central core domain GII88_RS00955 PF14089 KinB-signalling pathway activation in sporulation GII88_RS00960 PF01522 Polysaccharide deacetylase GII88_RS00990 PF02899 Phage integrase, N-terminal SAM-like domain GII88_RS00990 PF00589 Phage integrase family GII88_RS00995 PF06114 IrrE N-terminal-like domain GII88_RS01005 PF01381 Helix-turn-helix GII88_RS01040 PF09466 Hypothetical protein Yqai GII88_RS01075 PF03796 DnaB-like helicase C terminal domain GII88_RS01075 PF00772 DnaB-like helicase N terminal domain GII88_RS01090 PF05866 Endodeoxyribonuclease RusA GII88_RS01100 PF17356 Phage-like element PBSX protein XtrA GII88_RS01110 PF01381 Helix-turn-helix GII88_RS01120 PF18801 response regulator aspartate phosphatase H, N terminal GII88_RS01125 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GII88_RS01125 PF04740 LXG domain of WXG superfamily GII88_RS01145 PF04466 Phage terminase large subunit GII88_RS01145 PF17288 Terminase RNAseH like domain GII88_RS01150 PF04860 Phage portal protein GII88_RS01155 PF04233 Phage Mu protein F like protein GII88_RS01160 PF13676 TIR domain GII88_RS01170 PF14550 Putative phage serine protease XkdF GII88_RS01175 PF05065 Phage capsid family GII88_RS01180 PF14553 YqbF, hypothetical protein domain GII88_RS01185 PF11436 Protein of unknown function (DUF3199) GII88_RS01190 PF12206 Domain of unknown function (DUF3599) GII88_RS01195 PF04883 Bacteriophage HK97-gp10, putative tail-component GII88_RS01210 PF17481 Phage tail sheath protein beta-sandwich domain GII88_RS01210 PF17482 Phage tail sheath C-terminal domain GII88_RS01210 PF04984 Phage tail sheath protein subtilisin-like domain GII88_RS01215 PF09393 Phage tail tube protein GII88_RS01220 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GII88_RS01230 PF01464 Transglycosylase SLT domain GII88_RS01230 PF01464 Transglycosylase SLT domain GII88_RS01235 PF01476 LysM domain GII88_RS01245 PF10844 Protein of unknown function (DUF2577) GII88_RS01250 PF10934 Protein of unknown function (DUF2634) GII88_RS01255 PF04865 Baseplate J-like protein GII88_RS01260 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GII88_RS01275 PF09636 XkdW protein GII88_RS01280 PF09693 Phage uncharacterised protein (Phage_XkdX) GII88_RS01290 PF10779 Haemolysin XhlA GII88_RS01295 PF04688 SPP1 phage holin GII88_RS01300 PF01510 N-acetylmuramoyl-L-alanine amidase GII88_RS01300 PF01471 Putative peptidoglycan binding domain GII88_RS01315 PF01068 ATP dependent DNA ligase domain GII88_RS01330 PF08863 YolD-like protein GII88_RS01340 PF00144 Beta-lactamase GII88_RS01350 PF01758 Sodium Bile acid symporter family GII88_RS01355 PF17369 Family of unknown function (DUF5391) GII88_RS01365 PF07075 Protein of unknown function (DUF1343) GII88_RS01370 PF00933 Glycosyl hydrolase family 3 N terminal domain GII88_RS01370 PF01915 Glycosyl hydrolase family 3 C-terminal domain GII88_RS01375 PF00144 Beta-lactamase GII88_RS01380 PF00367 phosphotransferase system, EIIB GII88_RS01380 PF02378 Phosphotransferase system, EIIC GII88_RS01385 PF01380 SIS domain GII88_RS01385 PF01418 Helix-turn-helix domain, rpiR family GII88_RS01390 PF01380 SIS domain GII88_RS01395 PF04463 Protein of unknown function (DUF523) GII88_RS01425 PF00491 Arginase family GII88_RS01430 PF08281 Sigma-70, region 4 GII88_RS01430 PF04542 Sigma-70 region 2 GII88_RS01435 PF13490 Putative zinc-finger GII88_RS01440 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII88_RS01445 PF07949 YbbR-like protein GII88_RS01450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GII88_RS01450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GII88_RS01450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GII88_RS01450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GII88_RS01455 PF01380 SIS domain GII88_RS01470 PF00005 ABC transporter GII88_RS01475 PF00392 Bacterial regulatory proteins, gntR family GII88_RS01485 PF07690 Major Facilitator Superfamily GII88_RS01495 PF00664 ABC transporter transmembrane region GII88_RS01495 PF00005 ABC transporter GII88_RS01500 PF01323 DSBA-like thioredoxin domain GII88_RS01515 PF04439 Streptomycin adenylyltransferase GII88_RS01525 PF13419 Haloacid dehalogenase-like hydrolase GII88_RS01530 PF00324 Amino acid permease GII88_RS01535 PF03600 Citrate transporter GII88_RS01540 PF03401 Tripartite tricarboxylate transporter family receptor GII88_RS01545 PF12431 Transcriptional regulator GII88_RS01545 PF08279 HTH domain GII88_RS01545 PF00072 Response regulator receiver domain GII88_RS01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS01550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII88_RS01555 PF03466 LysR substrate binding domain GII88_RS01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS01565 PF07690 Major Facilitator Superfamily GII88_RS01570 PF17334 Minor curli fiber component A GII88_RS01575 PF17340 Family of unknown function (DUF5370) GII88_RS01585 PF03190 Protein of unknown function, DUF255 GII88_RS01610 PF12671 Putative amidase domain GII88_RS01630 PF03190 Protein of unknown function, DUF255 GII88_RS01640 PF07690 Major Facilitator Superfamily GII88_RS01645 PF08241 Methyltransferase domain GII88_RS01660 PF02690 Na+/Pi-cotransporter GII88_RS01665 PF05360 yiaA/B two helix domain GII88_RS01690 PF00892 EamA-like transporter family GII88_RS01695 PF12833 Helix-turn-helix domain GII88_RS01695 PF02311 AraC-like ligand binding domain GII88_RS01715 PF00465 Iron-containing alcohol dehydrogenase GII88_RS01720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII88_RS01720 PF00672 HAMP domain GII88_RS01720 PF12729 Four helix bundle sensory module for signal transduction GII88_RS01725 PF13407 Periplasmic binding protein domain GII88_RS01745 PF10710 Protein of unknown function (DUF2512) GII88_RS01750 PF00324 Amino acid permease GII88_RS01755 PF02574 Homocysteine S-methyltransferase GII88_RS01760 PF04794 YdjC-like protein GII88_RS01765 PF00367 phosphotransferase system, EIIB GII88_RS01765 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII88_RS01765 PF02378 Phosphotransferase system, EIIC GII88_RS01770 PF07739 TipAS antibiotic-recognition domain GII88_RS01770 PF13411 MerR HTH family regulatory protein GII88_RS01775 PF04239 Protein of unknown function (DUF421) GII88_RS01780 PF00132 Bacterial transferase hexapeptide (six repeats) GII88_RS01780 PF00101 Ribulose bisphosphate carboxylase, small chain GII88_RS01790 PF10990 Protein of unknown function (DUF2809) GII88_RS01795 PF01235 Sodium:alanine symporter family GII88_RS01800 PF04960 Glutaminase GII88_RS01805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS01810 PF00072 Response regulator receiver domain GII88_RS01810 PF08664 YcbB domain GII88_RS01815 PF13302 Acetyltransferase (GNAT) domain GII88_RS01820 PF00905 Penicillin binding protein transpeptidase domain GII88_RS01820 PF05569 BlaR1 peptidase M56 GII88_RS01825 PF03965 Penicillinase repressor GII88_RS01835 PF09423 PhoD-like phosphatase GII88_RS01835 PF16655 PhoD-like phosphatase, N-terminal domain GII88_RS01840 PF02416 mttA/Hcf106 family GII88_RS01845 PF00902 Sec-independent protein translocase protein (TatC) GII88_RS01850 PF00701 Dihydrodipicolinate synthetase family GII88_RS01855 PF00171 Aldehyde dehydrogenase family GII88_RS01860 PF07690 Major Facilitator Superfamily GII88_RS01865 PF13378 Enolase C-terminal domain-like GII88_RS01870 PF00392 Bacterial regulatory proteins, gntR family GII88_RS01870 PF07729 FCD domain GII88_RS01875 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GII88_RS01875 PF08666 SAF domain GII88_RS01880 PF00072 Response regulator receiver domain GII88_RS01880 PF00486 Transcriptional regulatory protein, C terminal GII88_RS01885 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS01885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS01890 PF00005 ABC transporter GII88_RS01905 PF13039 Protein of unknown function (DUF3900) GII88_RS01905 PF13037 Domain of unknown function (DUF3898) GII88_RS01910 PF16226 Domain of unknown function (DUF4885) GII88_RS01915 PF01636 Phosphotransferase enzyme family GII88_RS01920 PF01047 MarR family GII88_RS01925 PF13193 AMP-binding enzyme C-terminal domain GII88_RS01925 PF00501 AMP-binding enzyme GII88_RS01945 PF07739 TipAS antibiotic-recognition domain GII88_RS01945 PF13411 MerR HTH family regulatory protein GII88_RS01955 PF03551 Transcriptional regulator PadR-like family GII88_RS01955 PF13847 Methyltransferase domain GII88_RS01965 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein GII88_RS01970 PF00892 EamA-like transporter family GII88_RS01975 PF06271 RDD family GII88_RS01980 PF02810 SEC-C motif GII88_RS01980 PF05225 helix-turn-helix, Psq domain GII88_RS01985 PF00005 ABC transporter GII88_RS02000 PF00486 Transcriptional regulatory protein, C terminal GII88_RS02000 PF00072 Response regulator receiver domain GII88_RS02005 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS02010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS02010 PF03466 LysR substrate binding domain GII88_RS02015 PF14552 Tautomerase enzyme GII88_RS02030 PF17118 Domain of unknown function (DUF5105) GII88_RS02030 PF11611 Domain of unknown function (DUF4352) GII88_RS02035 PF03606 C4-dicarboxylate anaerobic carrier GII88_RS02040 PF07687 Peptidase dimerisation domain GII88_RS02040 PF01546 Peptidase family M20/M25/M40 GII88_RS02045 PF00583 Acetyltransferase (GNAT) family GII88_RS02050 PF01425 Amidase GII88_RS02055 PF08439 Oligopeptidase F GII88_RS02055 PF01432 Peptidase family M3 GII88_RS02060 PF04226 Transglycosylase associated protein GII88_RS02070 PF13183 4Fe-4S dicluster domain GII88_RS02070 PF02754 Cysteine-rich domain GII88_RS02075 PF01565 FAD binding domain GII88_RS02075 PF02913 FAD linked oxidases, C-terminal domain GII88_RS02080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII88_RS02085 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GII88_RS02090 PF02378 Phosphotransferase system, EIIC GII88_RS02095 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII88_RS02095 PF02056 Family 4 glycosyl hydrolase GII88_RS02100 PF00392 Bacterial regulatory proteins, gntR family GII88_RS02100 PF07702 UTRA domain GII88_RS02105 PF04794 YdjC-like protein GII88_RS02110 PF00041 Fibronectin type III domain GII88_RS02110 PF00704 Glycosyl hydrolases family 18 GII88_RS02120 PF00089 Trypsin GII88_RS02135 PF16244 Domain of unknown function (DUF4901) GII88_RS02140 PF00581 Rhodanese-like domain GII88_RS02145 PF07486 Cell Wall Hydrolase GII88_RS02150 PF00296 Luciferase-like monooxygenase GII88_RS02155 PF00877 NlpC/P60 family GII88_RS02165 PF00005 ABC transporter GII88_RS02165 PF13732 Domain of unknown function (DUF4162) GII88_RS02170 PF00440 Bacterial regulatory proteins, tetR family GII88_RS02170 PF17932 Tetracyclin repressor-like, C-terminal domain GII88_RS02190 PF02342 TerD domain GII88_RS02195 PF02342 TerD domain GII88_RS02200 PF02342 TerD domain GII88_RS02205 PF03741 Integral membrane protein TerC family GII88_RS02220 PF14266 Putative component of 'biosynthetic module' GII88_RS02225 PF05816 Toxic anion resistance protein (TelA) GII88_RS02230 PF02683 Cytochrome C biogenesis protein transmembrane region GII88_RS02240 PF13411 MerR HTH family regulatory protein GII88_RS02245 PF07690 Major Facilitator Superfamily GII88_RS02250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GII88_RS02250 PF00056 lactate/malate dehydrogenase, NAD binding domain GII88_RS02255 PF02652 L-lactate permease GII88_RS02260 PF01810 LysE type translocator GII88_RS02265 PF00324 Amino acid permease GII88_RS02270 PF02540 NAD synthase GII88_RS02275 PF01202 Shikimate kinase GII88_RS02280 PF10127 RNA repair pathway DNA polymerase beta family GII88_RS02285 PF01619 Proline dehydrogenase GII88_RS02290 PF00171 Aldehyde dehydrogenase family GII88_RS02295 PF00474 Sodium:solute symporter family GII88_RS02300 PF17853 GGDEF-like domain GII88_RS02300 PF13556 PucR C-terminal helix-turn-helix domain GII88_RS02305 PF09323 Domain of unknown function (DUF1980) GII88_RS02310 PF03773 Predicted permease GII88_RS02315 PF05448 Acetyl xylan esterase (AXE1) GII88_RS02335 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS02340 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII88_RS02345 PF02525 Flavodoxin-like fold GII88_RS02355 PF00232 Glycosyl hydrolase family 1 GII88_RS02360 PF11033 Competence protein J (ComJ) GII88_RS02365 PF14040 Deoxyribonuclease NucA/NucB GII88_RS02370 PF00069 Protein kinase domain GII88_RS02380 PF04740 LXG domain of WXG superfamily GII88_RS02385 PF05378 Hydantoinase/oxoprolinase N-terminal region GII88_RS02385 PF01968 Hydantoinase/oxoprolinase GII88_RS02390 PF02538 Hydantoinase B/oxoprolinase GII88_RS02400 PF08402 TOBE domain GII88_RS02400 PF00005 ABC transporter GII88_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS02410 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS02415 PF13193 AMP-binding enzyme C-terminal domain GII88_RS02415 PF00668 Condensation domain GII88_RS02415 PF00550 Phosphopantetheine attachment site GII88_RS02415 PF00501 AMP-binding enzyme GII88_RS02420 PF13193 AMP-binding enzyme C-terminal domain GII88_RS02420 PF00501 AMP-binding enzyme GII88_RS02420 PF00668 Condensation domain GII88_RS02420 PF00550 Phosphopantetheine attachment site GII88_RS02425 PF00668 Condensation domain GII88_RS02425 PF00501 AMP-binding enzyme GII88_RS02425 PF00550 Phosphopantetheine attachment site GII88_RS02425 PF13193 AMP-binding enzyme C-terminal domain GII88_RS02425 PF00975 Thioesterase domain GII88_RS02430 PF00975 Thioesterase domain GII88_RS02435 PF00892 EamA-like transporter family GII88_RS02440 PF00155 Aminotransferase class I and II GII88_RS02440 PF00392 Bacterial regulatory proteins, gntR family GII88_RS02445 PF01648 4'-phosphopantetheinyl transferase superfamily GII88_RS02450 PF00756 Putative esterase GII88_RS02470 PF00005 ABC transporter GII88_RS02490 PF00672 HAMP domain GII88_RS02490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII88_RS02495 PF00005 ABC transporter GII88_RS02500 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS02505 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII88_RS02510 PF02954 Bacterial regulatory protein, Fis family GII88_RS02510 PF13426 PAS domain GII88_RS02510 PF00158 Sigma-54 interaction domain GII88_RS02515 PF00202 Aminotransferase class-III GII88_RS02520 PF00324 Amino acid permease GII88_RS02525 PF00491 Arginase family GII88_RS02530 PF03466 LysR substrate binding domain GII88_RS02530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS02535 PF02441 Flavoprotein GII88_RS02540 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GII88_RS02590 PF14449 Pre-toxin TG GII88_RS02590 PF04740 LXG domain of WXG superfamily GII88_RS02610 PF06580 Histidine kinase GII88_RS02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS02610 PF00672 HAMP domain GII88_RS02610 PF02743 Cache domain GII88_RS02615 PF00072 Response regulator receiver domain GII88_RS02615 PF12833 Helix-turn-helix domain GII88_RS02620 PF13407 Periplasmic binding protein domain GII88_RS02625 PF00005 ABC transporter GII88_RS02630 PF02653 Branched-chain amino acid transport system / permease component GII88_RS02635 PF07690 Major Facilitator Superfamily GII88_RS02640 PF00583 Acetyltransferase (GNAT) family GII88_RS02640 PF01047 MarR family GII88_RS02645 PF08533 Beta-galactosidase C-terminal domain GII88_RS02645 PF02449 Beta-galactosidase GII88_RS02645 PF08532 Beta-galactosidase trimerisation domain GII88_RS02650 PF02333 Phytase GII88_RS02655 PF00854 POT family GII88_RS02660 PF12708 Pectate lyase superfamily protein GII88_RS02660 PF13229 Right handed beta helix region GII88_RS02670 PF03323 Bacillus/Clostridium GerA spore germination protein GII88_RS02675 PF05504 Spore germination B3/ GerAC like, C-terminal GII88_RS02680 PF03845 Spore germination protein GII88_RS02685 PF13411 MerR HTH family regulatory protein GII88_RS02685 PF07739 TipAS antibiotic-recognition domain GII88_RS02690 PF00005 ABC transporter GII88_RS02695 PF12704 MacB-like periplasmic core domain GII88_RS02695 PF02687 FtsX-like permease family GII88_RS02700 PF00072 Response regulator receiver domain GII88_RS02700 PF00486 Transcriptional regulatory protein, C terminal GII88_RS02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS02705 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS02705 PF00672 HAMP domain GII88_RS02715 PF13840 ACT domain GII88_RS02715 PF00696 Amino acid kinase family GII88_RS02720 PF01032 FecCD transport family GII88_RS02725 PF01032 FecCD transport family GII88_RS02730 PF00005 ABC transporter GII88_RS02735 PF01497 Periplasmic binding protein GII88_RS02740 PF07690 Major Facilitator Superfamily GII88_RS02745 PF00440 Bacterial regulatory proteins, tetR family GII88_RS02755 PF00881 Nitroreductase family GII88_RS02760 PF03992 Antibiotic biosynthesis monooxygenase GII88_RS02765 PF01022 Bacterial regulatory protein, arsR family GII88_RS02770 PF00155 Aminotransferase class I and II GII88_RS02770 PF00392 Bacterial regulatory proteins, gntR family GII88_RS02775 PF00202 Aminotransferase class-III GII88_RS02780 PF13520 Amino acid permease GII88_RS02785 PF00171 Aldehyde dehydrogenase family GII88_RS02790 PF00892 EamA-like transporter family GII88_RS02800 PF07987 Domain of unkown function (DUF1775) GII88_RS02805 PF13115 YtkA-like GII88_RS02805 PF04234 CopC domain GII88_RS02805 PF05425 Copper resistance protein D GII88_RS02810 PF05573 NosL GII88_RS02810 PF08220 DeoR-like helix-turn-helix domain GII88_RS02815 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS02815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII88_RS02815 PF18267 Rubredoxin NAD+ reductase C-terminal domain GII88_RS02815 PF04324 BFD-like [2Fe-2S] binding domain GII88_RS02820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII88_RS02820 PF01568 Molydopterin dinucleotide binding domain GII88_RS02820 PF00384 Molybdopterin oxidoreductase GII88_RS02825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII88_RS02825 PF04324 BFD-like [2Fe-2S] binding domain GII88_RS02825 PF18267 Rubredoxin NAD+ reductase C-terminal domain GII88_RS02825 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS02825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GII88_RS02830 PF00355 Rieske [2Fe-2S] domain GII88_RS02835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII88_RS02840 PF00392 Bacterial regulatory proteins, gntR family GII88_RS02840 PF07729 FCD domain GII88_RS02845 PF00939 Sodium:sulfate symporter transmembrane region GII88_RS02850 PF07977 FabA-like domain GII88_RS02855 PF07977 FabA-like domain GII88_RS02860 PF01980 tRNA-methyltransferase O GII88_RS02870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII88_RS02885 PF00456 Transketolase, thiamine diphosphate binding domain GII88_RS02890 PF02779 Transketolase, pyrimidine binding domain GII88_RS02890 PF02780 Transketolase, C-terminal domain GII88_RS02900 PF03746 LamB/YcsF family GII88_RS02905 PF01566 Natural resistance-associated macrophage protein GII88_RS02910 PF07286 Protein of unknown function (DUF1445) GII88_RS02915 PF02682 Carboxyltransferase domain, subdomain C and D GII88_RS02920 PF02626 Carboxyltransferase domain, subdomain A and B GII88_RS02925 PF01614 Bacterial transcriptional regulator GII88_RS02925 PF09339 IclR helix-turn-helix domain GII88_RS02930 PF13472 GDSL-like Lipase/Acylhydrolase family GII88_RS02935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII88_RS02935 PF02378 Phosphotransferase system, EIIC GII88_RS02940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII88_RS02945 PF08125 Mannitol dehydrogenase C-terminal domain GII88_RS02945 PF01232 Mannitol dehydrogenase Rossmann domain GII88_RS02950 PF05043 Mga helix-turn-helix domain GII88_RS02950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII88_RS02950 PF00874 PRD domain GII88_RS02950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII88_RS02950 PF08279 HTH domain GII88_RS02970 PF16242 Pyridoxamine 5'-phosphate oxidase like GII88_RS02975 PF10997 Alternate to MurJ GII88_RS02980 PF03816 Cell envelope-related transcriptional attenuator domain GII88_RS02985 PF12823 Domain of unknown function (DUF3817) GII88_RS02995 PF01037 Lrp/AsnC ligand binding domain GII88_RS03000 PF01131 DNA topoisomerase GII88_RS03000 PF01751 Toprim domain GII88_RS03005 PF13520 Amino acid permease GII88_RS03010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII88_RS03010 PF00205 Thiamine pyrophosphate enzyme, central domain GII88_RS03010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII88_RS03015 PF18416 N-acetylglucosamine binding protein domain 2 GII88_RS03015 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GII88_RS03025 PF13302 Acetyltransferase (GNAT) domain GII88_RS03030 PF01566 Natural resistance-associated macrophage protein GII88_RS03035 PF04226 Transglycosylase associated protein GII88_RS03040 PF10415 Fumarase C C-terminus GII88_RS03040 PF00206 Lyase GII88_RS03045 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GII88_RS03050 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GII88_RS03055 PF12787 EcsC protein family GII88_RS03065 PF07883 Cupin domain GII88_RS03070 PF10685 Stress-induced bacterial acidophilic repeat motif GII88_RS03070 PF00477 Small hydrophilic plant seed protein GII88_RS03075 PF01594 AI-2E family transporter GII88_RS03080 PF00375 Sodium:dicarboxylate symporter family GII88_RS03085 PF00005 ABC transporter GII88_RS03100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII88_RS03100 PF02770 Acyl-CoA dehydrogenase, middle domain GII88_RS03100 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GII88_RS03105 PF13040 Fur-regulated basic protein B GII88_RS03115 PF00085 Thioredoxin GII88_RS03120 PF01820 D-ala D-ala ligase N-terminus GII88_RS03120 PF07478 D-ala D-ala ligase C-terminus GII88_RS03125 PF02875 Mur ligase family, glutamate ligase domain GII88_RS03125 PF01225 Mur ligase family, catalytic domain GII88_RS03125 PF08245 Mur ligase middle domain GII88_RS03130 PF12146 Serine aminopeptidase, S33 GII88_RS03135 PF00270 DEAD/DEAH box helicase GII88_RS03135 PF00271 Helicase conserved C-terminal domain GII88_RS03140 PF03703 Bacterial PH domain GII88_RS03145 PF03703 Bacterial PH domain GII88_RS03150 PF01694 Rhomboid family GII88_RS03160 PF00842 Alanine racemase, C-terminal domain GII88_RS03160 PF01168 Alanine racemase, N-terminal domain GII88_RS03165 PF01402 Ribbon-helix-helix protein, copG family GII88_RS03170 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GII88_RS03175 PF08678 Rsbr N terminal GII88_RS03175 PF01740 STAS domain GII88_RS03180 PF01740 STAS domain GII88_RS03185 PF13581 Histidine kinase-like ATPase domain GII88_RS03190 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain GII88_RS03190 PF07228 Stage II sporulation protein E (SpoIIE) GII88_RS03195 PF01740 STAS domain GII88_RS03200 PF13581 Histidine kinase-like ATPase domain GII88_RS03205 PF04542 Sigma-70 region 2 GII88_RS03205 PF04539 Sigma-70 region 3 GII88_RS03205 PF04545 Sigma-70, region 4 GII88_RS03210 PF07228 Stage II sporulation protein E (SpoIIE) GII88_RS03215 PF17674 HHH domain GII88_RS03215 PF00575 S1 RNA binding domain GII88_RS03215 PF16921 Tex protein YqgF-like domain GII88_RS03215 PF09371 Tex-like protein N-terminal domain GII88_RS03220 PF00440 Bacterial regulatory proteins, tetR family GII88_RS03225 PF03176 MMPL family GII88_RS03235 PF10263 SprT-like family GII88_RS03280 PF01381 Helix-turn-helix GII88_RS03285 PF00487 Fatty acid desaturase GII88_RS03290 PF00313 'Cold-shock' DNA-binding domain GII88_RS03295 PF08240 Alcohol dehydrogenase GroES-like domain GII88_RS03295 PF00107 Zinc-binding dehydrogenase GII88_RS03310 PF01047 MarR family GII88_RS03315 PF00583 Acetyltransferase (GNAT) family GII88_RS03320 PF04299 Putative FMN-binding domain GII88_RS03330 PF01638 HxlR-like helix-turn-helix GII88_RS03335 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII88_RS03335 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII88_RS03345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS03345 PF03466 LysR substrate binding domain GII88_RS03360 PF04199 Putative cyclase GII88_RS03365 PF00324 Amino acid permease GII88_RS03380 PF08281 Sigma-70, region 4 GII88_RS03380 PF04542 Sigma-70 region 2 GII88_RS03385 PF11738 Protein of unknown function (DUF3298) GII88_RS03385 PF13739 Deacetylase PdaC GII88_RS03390 PF01757 Acyltransferase family GII88_RS03395 PF07690 Major Facilitator Superfamily GII88_RS03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS03400 PF06580 Histidine kinase GII88_RS03405 PF04397 LytTr DNA-binding domain GII88_RS03405 PF00072 Response regulator receiver domain GII88_RS03410 PF10425 C-terminus of bacterial fibrinogen-binding adhesin GII88_RS03410 PF17961 Bacterial Ig domain GII88_RS03410 PF00746 LPXTG cell wall anchor motif GII88_RS03410 PF04650 YSIRK type signal peptide GII88_RS03410 PF17210 SdrD B-like domain GII88_RS03415 PF04203 Sortase domain GII88_RS03425 PF00083 Sugar (and other) transporter GII88_RS03465 PF00586 AIR synthase related protein, N-terminal domain GII88_RS03465 PF02769 AIR synthase related protein, C-terminal domain GII88_RS03470 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GII88_RS03475 PF00814 Glycoprotease family GII88_RS03480 PF00583 Acetyltransferase (GNAT) family GII88_RS03485 PF00814 Glycoprotease family GII88_RS03490 PF00005 ABC transporter GII88_RS03490 PF16326 ABC transporter C-terminal domain GII88_RS03490 PF12848 ABC transporter GII88_RS03495 PF01967 MoaC family GII88_RS03500 PF06971 Putative DNA-binding protein N-terminus GII88_RS03500 PF02629 CoA binding domain GII88_RS03505 PF02416 mttA/Hcf106 family GII88_RS03510 PF00902 Sec-independent protein translocase protein (TatC) GII88_RS03515 PF14146 Domain of unknown function (DUF4305) GII88_RS03520 PF02517 CPBP intramembrane metalloprotease GII88_RS03525 PF00166 Chaperonin 10 Kd subunit GII88_RS03530 PF00118 TCP-1/cpn60 chaperonin family GII88_RS03570 PF04294 VanW like protein GII88_RS03575 PF10787 Uncharacterised protein from bacillus cereus group GII88_RS03585 PF02586 SOS response associated peptidase (SRAP) GII88_RS03595 PF00440 Bacterial regulatory proteins, tetR family GII88_RS03595 PF17933 Tetracyclin repressor-like, C-terminal domain GII88_RS03600 PF00391 PEP-utilising enzyme, mobile domain GII88_RS03600 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GII88_RS03610 PF04343 Protein of unknown function, DUF488 GII88_RS03615 PF00106 short chain dehydrogenase GII88_RS03620 PF00135 Carboxylesterase family GII88_RS03625 PF07690 Major Facilitator Superfamily GII88_RS03630 PF04012 PspA/IM30 family GII88_RS03635 PF08271 TFIIB zinc-binding GII88_RS03640 PF04536 TPM domain GII88_RS03645 PF13421 SPFH domain-Band 7 family GII88_RS03655 PF11495 Archaeal transcriptional regulator TrmB GII88_RS03655 PF01978 Sugar-specific transcriptional regulator TrmB GII88_RS03660 PF01810 LysE type translocator GII88_RS03665 PF06803 Protein of unknown function (DUF1232) GII88_RS03670 PF01098 Cell cycle protein GII88_RS03675 PF01098 Cell cycle protein GII88_RS03700 PF01522 Polysaccharide deacetylase GII88_RS03700 PF13739 Deacetylase PdaC GII88_RS03700 PF11738 Protein of unknown function (DUF3298) GII88_RS03705 PF09154 Domain of unknown function (DUF1939) GII88_RS03705 PF00128 Alpha amylase, catalytic domain GII88_RS03710 PF00356 Bacterial regulatory proteins, lacI family GII88_RS03715 PF00128 Alpha amylase, catalytic domain GII88_RS03715 PF02903 Alpha amylase, N-terminal ig-like domain GII88_RS03720 PF13416 Bacterial extracellular solute-binding protein GII88_RS03725 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS03730 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS03735 PF06691 Protein of unknown function (DUF1189) GII88_RS03740 PF03636 Glycosyl hydrolase family 65, N-terminal domain GII88_RS03740 PF03632 Glycosyl hydrolase family 65 central catalytic domain GII88_RS03740 PF03633 Glycosyl hydrolase family 65, C-terminal domain GII88_RS03745 PF16657 Maltogenic Amylase, C-terminal domain GII88_RS03745 PF00128 Alpha amylase, catalytic domain GII88_RS03750 PF13419 Haloacid dehalogenase-like hydrolase GII88_RS03755 PF01479 S4 domain GII88_RS03755 PF00579 tRNA synthetases class I (W and Y) GII88_RS03760 PF01047 MarR family GII88_RS03775 PF03330 Lytic transglycolase GII88_RS03780 PF07676 WD40-like Beta Propeller Repeat GII88_RS03785 PF13170 Protein of unknown function (DUF4003) GII88_RS03800 PF10502 Signal peptidase, peptidase S26 GII88_RS03810 PF13460 NAD(P)H-binding GII88_RS03815 PF12833 Helix-turn-helix domain GII88_RS03820 PF07731 Multicopper oxidase GII88_RS03820 PF00394 Multicopper oxidase GII88_RS03820 PF07732 Multicopper oxidase GII88_RS03835 PF01545 Cation efflux family GII88_RS03835 PF16916 Dimerisation domain of Zinc Transporter GII88_RS03840 PF07726 ATPase family associated with various cellular activities (AAA) GII88_RS03840 PF17863 AAA lid domain GII88_RS03845 PF01882 Protein of unknown function DUF58 GII88_RS03850 PF13559 Domain of unknown function (DUF4129) GII88_RS03850 PF01841 Transglutaminase-like superfamily GII88_RS03850 PF11992 Domain of unknown function (DUF3488) GII88_RS03855 PF02540 NAD synthase GII88_RS03855 PF00958 GMP synthase C terminal domain GII88_RS03855 PF00117 Glutamine amidotransferase class-I GII88_RS03865 PF00860 Permease family GII88_RS03875 PF13076 Fur-regulated basic protein A GII88_RS03880 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII88_RS03885 PF14044 NETI protein GII88_RS03890 PF00731 AIR carboxylase GII88_RS03895 PF02222 ATP-grasp domain GII88_RS03895 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GII88_RS03900 PF00206 Lyase GII88_RS03900 PF10397 Adenylosuccinate lyase C-terminus GII88_RS03905 PF01259 SAICAR synthetase GII88_RS03910 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase GII88_RS03920 PF00586 AIR synthase related protein, N-terminal domain GII88_RS03920 PF02769 AIR synthase related protein, C-terminal domain GII88_RS03920 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GII88_RS03925 PF00156 Phosphoribosyl transferase domain GII88_RS03930 PF02769 AIR synthase related protein, C-terminal domain GII88_RS03930 PF00586 AIR synthase related protein, N-terminal domain GII88_RS03935 PF00551 Formyl transferase GII88_RS03940 PF01808 AICARFT/IMPCHase bienzyme GII88_RS03940 PF02142 MGS-like domain GII88_RS03945 PF02844 Phosphoribosylglycinamide synthetase, N domain GII88_RS03945 PF02843 Phosphoribosylglycinamide synthetase, C domain GII88_RS03945 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GII88_RS03960 PF00067 Cytochrome P450 GII88_RS03975 PF11127 Protein of unknown function (DUF2892) GII88_RS03980 PF13382 Adenine deaminase C-terminal domain GII88_RS03980 PF01979 Amidohydrolase family GII88_RS03985 PF17479 Protein of unknown function (DUF3048) C-terminal domain GII88_RS03985 PF11258 Protein of unknown function (DUF3048) N-terminal domain GII88_RS03990 PF01371 Trp repressor protein GII88_RS03995 PF01884 PcrB family GII88_RS04000 PF00580 UvrD/REP helicase N-terminal domain GII88_RS04000 PF13361 UvrD-like helicase C-terminal domain GII88_RS04005 PF12826 Helix-hairpin-helix motif GII88_RS04005 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GII88_RS04005 PF03120 NAD-dependent DNA ligase OB-fold domain GII88_RS04005 PF01653 NAD-dependent DNA ligase adenylation domain GII88_RS04005 PF00533 BRCA1 C Terminus (BRCT) domain GII88_RS04010 PF07537 CamS sex pheromone cAM373 precursor GII88_RS04020 PF14502 Helix-turn-helix domain GII88_RS04020 PF14503 YhfZ C-terminal domain GII88_RS04030 PF10941 Protein of unknown function DUF2620 GII88_RS04035 PF10797 Protein of unknown function GII88_RS04040 PF02126 Phosphotriesterase family GII88_RS04045 PF00155 Aminotransferase class I and II GII88_RS04050 PF01676 Metalloenzyme superfamily GII88_RS04055 PF01168 Alanine racemase, N-terminal domain GII88_RS04060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GII88_RS04065 PF02308 MgtC family GII88_RS04070 PF00474 Sodium:solute symporter family GII88_RS04075 PF02686 Glu-tRNAGln amidotransferase C subunit GII88_RS04080 PF01425 Amidase GII88_RS04085 PF02637 GatB domain GII88_RS04085 PF02934 GatB/GatE catalytic domain GII88_RS04100 PF02156 Glycosyl hydrolase family 26 GII88_RS04105 PF00440 Bacterial regulatory proteins, tetR family GII88_RS04110 PF00873 AcrB/AcrD/AcrF family GII88_RS04120 PF13302 Acetyltransferase (GNAT) domain GII88_RS04125 PF01156 Inosine-uridine preferring nucleoside hydrolase GII88_RS04130 PF00781 Diacylglycerol kinase catalytic domain GII88_RS04135 PF05958 tRNA (Uracil-5-)-methyltransferase GII88_RS04135 PF01938 TRAM domain GII88_RS04145 PF02378 Phosphotransferase system, EIIC GII88_RS04145 PF00367 phosphotransferase system, EIIB GII88_RS04145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII88_RS04150 PF00232 Glycosyl hydrolase family 1 GII88_RS04155 PF00874 PRD domain GII88_RS04155 PF03123 CAT RNA binding domain GII88_RS04160 PF18801 response regulator aspartate phosphatase H, N terminal GII88_RS04175 PF01709 Transcriptional regulator GII88_RS04180 PF01381 Helix-turn-helix GII88_RS04190 PF00171 Aldehyde dehydrogenase family GII88_RS04195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII88_RS04200 PF00939 Sodium:sulfate symporter transmembrane region GII88_RS04205 PF00005 ABC transporter GII88_RS04205 PF16326 ABC transporter C-terminal domain GII88_RS04205 PF12848 ABC transporter GII88_RS04215 PF02649 Type I GTP cyclohydrolase folE2 GII88_RS04230 PF07683 Cobalamin synthesis protein cobW C-terminal domain GII88_RS04230 PF02492 CobW/HypB/UreG, nucleotide-binding domain GII88_RS04235 PF03744 6-carboxyhexanoate--CoA ligase GII88_RS04240 PF00202 Aminotransferase class-III GII88_RS04245 PF00155 Aminotransferase class I and II GII88_RS04255 PF06968 Biotin and Thiamin Synthesis associated domain GII88_RS04255 PF04055 Radical SAM superfamily GII88_RS04260 PF00067 Cytochrome P450 GII88_RS04270 PF13411 MerR HTH family regulatory protein GII88_RS04275 PF07690 Major Facilitator Superfamily GII88_RS04280 PF00005 ABC transporter GII88_RS04280 PF12848 ABC transporter GII88_RS04285 PF00271 Helicase conserved C-terminal domain GII88_RS04285 PF00270 DEAD/DEAH box helicase GII88_RS04290 PF00107 Zinc-binding dehydrogenase GII88_RS04290 PF16884 N-terminal domain of oxidoreductase GII88_RS04295 PF11486 Protein of unknown function (DUF3212) GII88_RS04300 PF11181 Heat induced stress protein YflT GII88_RS04305 PF00939 Sodium:sulfate symporter transmembrane region GII88_RS04325 PF00753 Metallo-beta-lactamase superfamily GII88_RS04335 PF02898 Nitric oxide synthase, oxygenase domain GII88_RS04340 PF07853 Protein of unknown function (DUF1648) GII88_RS04340 PF13630 SdpI/YhfL protein family GII88_RS04345 PF01022 Bacterial regulatory protein, arsR family GII88_RS04350 PF00708 Acylphosphatase GII88_RS04355 PF03473 MOSC domain GII88_RS04355 PF03475 3-alpha domain GII88_RS04360 PF11121 Protein of unknown function (DUF2639) GII88_RS04365 PF00557 Metallopeptidase family M24 GII88_RS04370 PF00884 Sulfatase GII88_RS04375 PF09350 Domain of unknown function (DUF1992) GII88_RS04380 PF01235 Sodium:alanine symporter family GII88_RS04385 PF02378 Phosphotransferase system, EIIC GII88_RS04385 PF00367 phosphotransferase system, EIIB GII88_RS04390 PF00128 Alpha amylase, catalytic domain GII88_RS04390 PF16657 Maltogenic Amylase, C-terminal domain GII88_RS04395 PF07702 UTRA domain GII88_RS04395 PF00392 Bacterial regulatory proteins, gntR family GII88_RS04420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII88_RS04425 PF00132 Bacterial transferase hexapeptide (six repeats) GII88_RS04430 PF16363 GDP-mannose 4,6 dehydratase GII88_RS04440 PF00535 Glycosyl transferase family 2 GII88_RS04445 PF13181 Tetratricopeptide repeat GII88_RS04445 PF00535 Glycosyl transferase family 2 GII88_RS04450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII88_RS04455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII88_RS04455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII88_RS04460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII88_RS04460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII88_RS04460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII88_RS04465 PF07859 alpha/beta hydrolase fold GII88_RS04470 PF01638 HxlR-like helix-turn-helix GII88_RS04475 PF00881 Nitroreductase family GII88_RS04480 PF00149 Calcineurin-like phosphoesterase GII88_RS04480 PF02872 5'-nucleotidase, C-terminal domain GII88_RS04485 PF01965 DJ-1/PfpI family GII88_RS04490 PF06569 Protein of unknown function (DUF1128) GII88_RS04495 PF01235 Sodium:alanine symporter family GII88_RS04500 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII88_RS04510 PF03631 Virulence factor BrkB GII88_RS04515 PF07690 Major Facilitator Superfamily GII88_RS04525 PF01699 Sodium/calcium exchanger protein GII88_RS04530 PF14167 YfkD-like protein GII88_RS04535 PF04055 Radical SAM superfamily GII88_RS04535 PF08756 YfkB-like domain GII88_RS04545 PF01522 Polysaccharide deacetylase GII88_RS04550 PF00465 Iron-containing alcohol dehydrogenase GII88_RS04560 PF01544 CorA-like Mg2+ transporter protein GII88_RS04565 PF00730 HhH-GPD superfamily base excision DNA repair protein GII88_RS04570 PF01938 TRAM domain GII88_RS04570 PF05958 tRNA (Uracil-5-)-methyltransferase GII88_RS04600 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GII88_RS04605 PF10925 Protein of unknown function (DUF2680) GII88_RS04610 PF07690 Major Facilitator Superfamily GII88_RS04615 PF00367 phosphotransferase system, EIIB GII88_RS04615 PF02378 Phosphotransferase system, EIIC GII88_RS04620 PF03123 CAT RNA binding domain GII88_RS04620 PF00874 PRD domain GII88_RS04630 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GII88_RS04635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GII88_RS04635 PF00361 Proton-conducting membrane transporter GII88_RS04640 PF10057 Uncharacterized conserved protein (DUF2294) GII88_RS04650 PF00676 Dehydrogenase E1 component GII88_RS04655 PF02779 Transketolase, pyrimidine binding domain GII88_RS04655 PF02780 Transketolase, C-terminal domain GII88_RS04660 PF00364 Biotin-requiring enzyme GII88_RS04660 PF02817 e3 binding domain GII88_RS04660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII88_RS04665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII88_RS04665 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS04670 PF01590 GAF domain GII88_RS04670 PF02954 Bacterial regulatory protein, Fis family GII88_RS04670 PF00158 Sigma-54 interaction domain GII88_RS04675 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GII88_RS04680 PF02056 Family 4 glycosyl hydrolase GII88_RS04680 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII88_RS04685 PF01418 Helix-turn-helix domain, rpiR family GII88_RS04685 PF01380 SIS domain GII88_RS04690 PF00367 phosphotransferase system, EIIB GII88_RS04690 PF02378 Phosphotransferase system, EIIC GII88_RS04705 PF01638 HxlR-like helix-turn-helix GII88_RS04710 PF07681 DoxX GII88_RS04715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII88_RS04720 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain GII88_RS04720 PF04616 Glycosyl hydrolases family 43 GII88_RS04725 PF04616 Glycosyl hydrolases family 43 GII88_RS04725 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain GII88_RS04730 PF02311 AraC-like ligand binding domain GII88_RS04730 PF12833 Helix-turn-helix domain GII88_RS04735 PF13416 Bacterial extracellular solute-binding protein GII88_RS04740 PF02525 Flavodoxin-like fold GII88_RS04745 PF00293 NUDIX domain GII88_RS04750 PF12867 DinB superfamily GII88_RS04760 PF03706 Lysylphosphatidylglycerol synthase TM region GII88_RS04760 PF09924 Uncharacterised conserved protein (DUF2156) GII88_RS04765 PF02567 Phenazine biosynthesis-like protein GII88_RS04770 PF00881 Nitroreductase family GII88_RS04775 PF14151 YfhD-like protein GII88_RS04790 PF08338 Domain of unknown function (DUF1731) GII88_RS04790 PF01370 NAD dependent epimerase/dehydratase family GII88_RS04795 PF02631 RecX family GII88_RS04800 PF08838 Protein of unknown function (DUF1811) GII88_RS04810 PF08176 Small acid-soluble spore protein K family GII88_RS04815 PF14043 WVELL protein GII88_RS04825 PF00535 Glycosyl transferase family 2 GII88_RS04835 PF09586 Bacterial membrane protein YfhO GII88_RS04840 PF04307 LexA-binding, inner membrane-associated putative hydrolase GII88_RS04845 PF00730 HhH-GPD superfamily base excision DNA repair protein GII88_RS04845 PF14815 NUDIX domain GII88_RS04865 PF14182 YgaB-like protein GII88_RS04870 PF04167 Protein of unknown function (DUF402) GII88_RS04875 PF00664 ABC transporter transmembrane region GII88_RS04875 PF00005 ABC transporter GII88_RS04880 PF00005 ABC transporter GII88_RS04880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS04885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS04885 PF00005 ABC transporter GII88_RS04890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII88_RS04895 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS04900 PF12911 N-terminal TM domain of oligopeptide transport permease C GII88_RS04900 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS04905 PF06081 Aromatic acid exporter family member 1 GII88_RS04910 PF00202 Aminotransferase class-III GII88_RS04915 PF00578 AhpC/TSA family GII88_RS04920 PF01475 Ferric uptake regulator family GII88_RS04925 PF11023 Zinc-ribbon containing domain GII88_RS04930 PF14540 Nucleotidyltransferase-like GII88_RS04930 PF18576 Helix-turn-helix domain GII88_RS05030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII88_RS05030 PF02824 TGS domain GII88_RS05030 PF03129 Anticodon binding domain GII88_RS05030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII88_RS05040 PF01487 Type I 3-dehydroquinase GII88_RS05045 PF13667 ThiC-associated domain GII88_RS05045 PF01964 Radical SAM ThiC family GII88_RS05050 PF00005 ABC transporter GII88_RS05055 PF09084 NMT1/THI5 like GII88_RS05060 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS05065 PF00296 Luciferase-like monooxygenase GII88_RS05075 PF01381 Helix-turn-helix GII88_RS05085 PF13732 Domain of unknown function (DUF4162) GII88_RS05085 PF00005 ABC transporter GII88_RS05105 PF00253 Ribosomal protein S14p/S29e GII88_RS05120 PF08331 Domain of unknown function (DUF1730) GII88_RS05125 PF12671 Putative amidase domain GII88_RS05130 PF00588 SpoU rRNA Methylase family GII88_RS05135 PF13171 Protein of unknown function (DUF4004) GII88_RS05140 PF04519 Polymer-forming cytoskeletal GII88_RS05150 PF06798 PrkA serine protein kinase C-terminal domain GII88_RS05150 PF08298 PrkA AAA domain GII88_RS05155 PF04285 Protein of unknown function (DUF444) GII88_RS05165 PF07690 Major Facilitator Superfamily GII88_RS05170 PF03358 NADPH-dependent FMN reductase GII88_RS05185 PF00005 ABC transporter GII88_RS05190 PF00005 ABC transporter GII88_RS05195 PF00005 ABC transporter GII88_RS05200 PF12679 ABC-2 family transporter protein GII88_RS05205 PF00313 'Cold-shock' DNA-binding domain GII88_RS05210 PF09383 NIL domain GII88_RS05210 PF00005 ABC transporter GII88_RS05215 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS05220 PF03180 NLPA lipoprotein GII88_RS05225 PF00375 Sodium:dicarboxylate symporter family GII88_RS05235 PF00326 Prolyl oligopeptidase family GII88_RS05240 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII88_RS05250 PF07875 Coat F domain GII88_RS05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS05255 PF13426 PAS domain GII88_RS05255 PF13188 PAS domain GII88_RS05255 PF00989 PAS fold GII88_RS05255 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS05260 PF02872 5'-nucleotidase, C-terminal domain GII88_RS05260 PF00149 Calcineurin-like phosphoesterase GII88_RS05260 PF00565 Staphylococcal nuclease homologue GII88_RS05260 PF00746 LPXTG cell wall anchor motif GII88_RS05265 PF04203 Sortase domain GII88_RS05270 PF01479 S4 domain GII88_RS05270 PF00849 RNA pseudouridylate synthase GII88_RS05275 PF17326 Family of unknown function (DUF5365) GII88_RS05280 PF00571 CBS domain GII88_RS05285 PF13419 Haloacid dehalogenase-like hydrolase GII88_RS05290 PF00795 Carbon-nitrogen hydrolase GII88_RS05290 PF00583 Acetyltransferase (GNAT) family GII88_RS05295 PF16326 ABC transporter C-terminal domain GII88_RS05295 PF00005 ABC transporter GII88_RS05295 PF12848 ABC transporter GII88_RS05300 PF01226 Formate/nitrite transporter GII88_RS05305 PF03547 Membrane transport protein GII88_RS05310 PF00107 Zinc-binding dehydrogenase GII88_RS05310 PF08240 Alcohol dehydrogenase GroES-like domain GII88_RS05315 PF04309 Glycerol-3-phosphate responsive antiterminator GII88_RS05320 PF00230 Major intrinsic protein GII88_RS05325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII88_RS05325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII88_RS05330 PF01266 FAD dependent oxidoreductase GII88_RS05330 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GII88_RS05335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GII88_RS05335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GII88_RS05335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GII88_RS05335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GII88_RS05350 PF13185 GAF domain GII88_RS05350 PF07730 Histidine kinase GII88_RS05355 PF00196 Bacterial regulatory proteins, luxR family GII88_RS05355 PF00072 Response regulator receiver domain GII88_RS05360 PF03358 NADPH-dependent FMN reductase GII88_RS05365 PF14148 YhdB-like protein GII88_RS05370 PF13028 Protein of unknown function (DUF3889) GII88_RS05375 PF02082 Transcriptional regulator GII88_RS05380 PF00175 Oxidoreductase NAD-binding domain GII88_RS05380 PF00042 Globin GII88_RS05380 PF00970 Oxidoreductase FAD-binding domain GII88_RS05385 PF04293 SpoVR like protein GII88_RS05390 PF01476 LysM domain GII88_RS05390 PF00877 NlpC/P60 family GII88_RS05395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS05395 PF03466 LysR substrate binding domain GII88_RS05400 PF00285 Citrate synthase, C-terminal domain GII88_RS05405 PF07995 Glucose / Sorbosone dehydrogenase GII88_RS05415 PF00209 Sodium:neurotransmitter symporter family GII88_RS05425 PF12833 Helix-turn-helix domain GII88_RS05425 PF06445 GyrI-like small molecule binding domain GII88_RS05430 PF00155 Aminotransferase class I and II GII88_RS05430 PF00392 Bacterial regulatory proteins, gntR family GII88_RS05440 PF17453 Sigma-M inhibitor GII88_RS05445 PF13800 Sigma factor regulator N-terminal GII88_RS05445 PF13791 Sigma factor regulator C-terminal GII88_RS05450 PF04542 Sigma-70 region 2 GII88_RS05450 PF08281 Sigma-70, region 4 GII88_RS05455 PF07883 Cupin domain GII88_RS05465 PF01553 Acyltransferase GII88_RS05470 PF05656 Protein of unknown function (DUF805) GII88_RS05480 PF00440 Bacterial regulatory proteins, tetR family GII88_RS05485 PF01595 Cyclin M transmembrane N-terminal domain GII88_RS05485 PF03471 Transporter associated domain GII88_RS05485 PF00571 CBS domain GII88_RS05490 PF13411 MerR HTH family regulatory protein GII88_RS05495 PF03471 Transporter associated domain GII88_RS05495 PF01595 Cyclin M transmembrane N-terminal domain GII88_RS05495 PF00571 CBS domain GII88_RS05510 PF05036 Sporulation related domain GII88_RS05510 PF01520 N-acetylmuramoyl-L-alanine amidase GII88_RS05515 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GII88_RS05520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GII88_RS05525 PF03009 Glycerophosphoryl diester phosphodiesterase family GII88_RS05530 PF17444 Uncharacterized YhdX-like GII88_RS05535 PF00924 Mechanosensitive ion channel GII88_RS05540 PF02146 Sir2 family GII88_RS05550 PF01522 Polysaccharide deacetylase GII88_RS05555 PF01063 Amino-transferase class IV GII88_RS05560 PF03553 Na+/H+ antiporter family GII88_RS05565 PF01263 Aldose 1-epimerase GII88_RS05570 PF16302 Domain of unknown function (DUF4944) GII88_RS05590 PF00582 Universal stress protein family GII88_RS05595 PF00664 ABC transporter transmembrane region GII88_RS05595 PF00005 ABC transporter GII88_RS05600 PF00664 ABC transporter transmembrane region GII88_RS05600 PF00005 ABC transporter GII88_RS05605 PF13460 NAD(P)H-binding GII88_RS05610 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII88_RS05620 PF00005 ABC transporter GII88_RS05620 PF17912 MalK OB fold domain GII88_RS05620 PF03459 TOBE domain GII88_RS05625 PF13556 PucR C-terminal helix-turn-helix domain GII88_RS05630 PF17277 Family of unknown function (DUF5342) GII88_RS05635 PF14398 YheC/D like ATP-grasp GII88_RS05640 PF14398 YheC/D like ATP-grasp GII88_RS05645 PF04286 Protein of unknown function (DUF445) GII88_RS05650 PF06133 Control of competence regulator ComK, YlbF/YmcA GII88_RS05665 PF04055 Radical SAM superfamily GII88_RS05670 PF00999 Sodium/hydrogen exchanger family GII88_RS05675 PF02080 TrkA-C domain GII88_RS05685 PF00378 Enoyl-CoA hydratase/isomerase GII88_RS05690 PF18801 response regulator aspartate phosphatase H, N terminal GII88_RS05700 PF14120 YhzD-like protein GII88_RS05705 PF13732 Domain of unknown function (DUF4162) GII88_RS05705 PF00005 ABC transporter GII88_RS05715 PF00149 Calcineurin-like phosphoesterase GII88_RS05725 PF01966 HD domain GII88_RS05730 PF14147 Sporulation protein YhaL GII88_RS05740 PF09680 Family of unknown function GII88_RS05755 PF11667 Putative zincin peptidase GII88_RS05760 PF08963 Protein of unknown function (DUF1878) GII88_RS05765 PF01047 MarR family GII88_RS05770 PF12732 YtxH-like protein GII88_RS05780 PF17099 Tryptophan transporter TrpP GII88_RS05785 PF00266 Aminotransferase class-V GII88_RS05790 PF01230 HIT domain GII88_RS05795 PF00005 ABC transporter GII88_RS05800 PF05975 Bacterial ABC transporter protein EcsB GII88_RS05805 PF12787 EcsC protein family GII88_RS05810 PF07687 Peptidase dimerisation domain GII88_RS05810 PF01546 Peptidase family M20/M25/M40 GII88_RS05820 PF03992 Antibiotic biosynthesis monooxygenase GII88_RS05825 PF00912 Transglycosylase GII88_RS05825 PF00905 Penicillin binding protein transpeptidase domain GII88_RS05830 PF01208 Uroporphyrinogen decarboxylase (URO-D) GII88_RS05835 PF00762 Ferrochelatase GII88_RS05840 PF01593 Flavin containing amine oxidoreductase GII88_RS05845 PF00440 Bacterial regulatory proteins, tetR family GII88_RS05845 PF17932 Tetracyclin repressor-like, C-terminal domain GII88_RS05855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GII88_RS05855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GII88_RS05860 PF05343 M42 glutamyl aminopeptidase GII88_RS05870 PF00375 Sodium:dicarboxylate symporter family GII88_RS05875 PF14149 YhfH-like protein GII88_RS05880 PF12706 Beta-lactamase superfamily domain GII88_RS05885 PF03099 Biotin/lipoate A/B protein ligase family GII88_RS05885 PF10437 Bacterial lipoate protein ligase C-terminus GII88_RS05890 PF00501 AMP-binding enzyme GII88_RS05890 PF13193 AMP-binding enzyme C-terminal domain GII88_RS05900 PF01381 Helix-turn-helix GII88_RS05900 PF07883 Cupin domain GII88_RS05915 PF16491 CAAX prenyl protease N-terminal, five membrane helices GII88_RS05915 PF01435 Peptidase family M48 GII88_RS05920 PF05922 Peptidase inhibitor I9 GII88_RS05920 PF00082 Subtilase family GII88_RS05925 PF00892 EamA-like transporter family GII88_RS05930 PF01497 Periplasmic binding protein GII88_RS05935 PF01032 FecCD transport family GII88_RS05940 PF01032 FecCD transport family GII88_RS05945 PF00300 Histidine phosphatase superfamily (branch 1) GII88_RS05950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII88_RS05955 PF00355 Rieske [2Fe-2S] domain GII88_RS05955 PF01266 FAD dependent oxidoreductase GII88_RS05965 PF08858 IDEAL domain GII88_RS05970 PF06338 ComK protein GII88_RS05980 PF09335 SNARE associated Golgi protein GII88_RS05985 PF10502 Signal peptidase, peptidase S26 GII88_RS05990 PF00082 Subtilase family GII88_RS06000 PF17853 GGDEF-like domain GII88_RS06000 PF13556 PucR C-terminal helix-turn-helix domain GII88_RS06000 PF07905 Purine catabolism regulatory protein-like family GII88_RS06010 PF01979 Amidohydrolase family GII88_RS06015 PF01546 Peptidase family M20/M25/M40 GII88_RS06020 PF05899 Protein of unknown function (DUF861) GII88_RS06020 PF07883 Cupin domain GII88_RS06025 PF02615 Malate/L-lactate dehydrogenase GII88_RS06030 PF02615 Malate/L-lactate dehydrogenase GII88_RS06035 PF02629 CoA binding domain GII88_RS06035 PF00549 CoA-ligase GII88_RS06040 PF06545 Protein of unknown function (DUF1116) GII88_RS06050 PF00696 Amino acid kinase family GII88_RS06055 PF07690 Major Facilitator Superfamily GII88_RS06065 PF18801 response regulator aspartate phosphatase H, N terminal GII88_RS06085 PF00356 Bacterial regulatory proteins, lacI family GII88_RS06090 PF01547 Bacterial extracellular solute-binding protein GII88_RS06095 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS06100 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS06105 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII88_RS06105 PF02056 Family 4 glycosyl hydrolase GII88_RS06110 PF05145 Transition state regulatory protein AbrB GII88_RS06115 PF11007 Spore coat associated protein JA (CotJA) GII88_RS06120 PF12652 CotJB protein GII88_RS06125 PF05067 Manganese containing catalase GII88_RS06130 PF13193 AMP-binding enzyme C-terminal domain GII88_RS06130 PF00501 AMP-binding enzyme GII88_RS06135 PF07690 Major Facilitator Superfamily GII88_RS06145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS06145 PF00989 PAS fold GII88_RS06145 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS06145 PF16736 Single Cache-like GII88_RS06150 PF00072 Response regulator receiver domain GII88_RS06150 PF00486 Transcriptional regulatory protein, C terminal GII88_RS06155 PF02915 Rubrerythrin GII88_RS06165 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS06170 PF12705 PD-(D/E)XK nuclease superfamily GII88_RS06175 PF13361 UvrD-like helicase C-terminal domain GII88_RS06175 PF00580 UvrD/REP helicase N-terminal domain GII88_RS06175 PF12705 PD-(D/E)XK nuclease superfamily GII88_RS06180 PF00149 Calcineurin-like phosphoesterase GII88_RS06180 PF12320 Type 5 capsule protein repressor C-terminal domain GII88_RS06185 PF13476 AAA domain GII88_RS06190 PF10676 Spore germination protein gerPA/gerPF GII88_RS06195 PF10970 Spore germination protein GerPE GII88_RS06205 PF10737 Spore germination protein GerPC GII88_RS06210 PF10803 Spore germination GerPB GII88_RS06215 PF10676 Spore germination protein gerPA/gerPF GII88_RS06220 PF12650 Domain of unknown function (DUF3784) GII88_RS06225 PF09388 Spo0E like sporulation regulatory protein GII88_RS06230 PF08757 CotH kinase protein GII88_RS06240 PF01557 Fumarylacetoacetate (FAA) hydrolase family GII88_RS06245 PF03193 RsgA GTPase GII88_RS06250 PF07457 Protein of unknown function (DUF1516) GII88_RS06255 PF10949 Protein of unknown function (DUF2777) GII88_RS06260 PF13537 Glutamine amidotransferase domain GII88_RS06260 PF00733 Asparagine synthase GII88_RS06270 PF00543 Nitrogen regulatory protein P-II GII88_RS06275 PF01554 MatE GII88_RS06280 PF12833 Helix-turn-helix domain GII88_RS06280 PF02311 AraC-like ligand binding domain GII88_RS06290 PF00356 Bacterial regulatory proteins, lacI family GII88_RS06295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII88_RS06295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII88_RS06300 PF00155 Aminotransferase class I and II GII88_RS06300 PF00392 Bacterial regulatory proteins, gntR family GII88_RS06305 PF00202 Aminotransferase class-III GII88_RS06310 PF00282 Pyridoxal-dependent decarboxylase conserved domain GII88_RS06315 PF06276 Ferric iron reductase FhuF-like transporter GII88_RS06315 PF04183 IucA / IucC family GII88_RS06325 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GII88_RS06330 PF06276 Ferric iron reductase FhuF-like transporter GII88_RS06330 PF04183 IucA / IucC family GII88_RS06335 PF13673 Acetyltransferase (GNAT) domain GII88_RS06345 PF08279 HTH domain GII88_RS06345 PF13280 WYL domain GII88_RS06350 PF02574 Homocysteine S-methyltransferase GII88_RS06350 PF02965 Vitamin B12 dependent methionine synthase, activation domain GII88_RS06350 PF02607 B12 binding domain GII88_RS06350 PF02310 B12 binding domain GII88_RS06350 PF00809 Pterin binding enzyme GII88_RS06355 PF02574 Homocysteine S-methyltransferase GII88_RS06355 PF02219 Methylenetetrahydrofolate reductase GII88_RS06360 PF04461 Protein of unknown function (DUF520) GII88_RS06365 PF13509 S1 domain GII88_RS06365 PF17783 CvfB-like winged helix domain GII88_RS06380 PF02645 Uncharacterised protein, DegV family COG1307 GII88_RS06385 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII88_RS06385 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII88_RS06390 PF12690 Intracellular proteinase inhibitor GII88_RS06395 PF00478 IMP dehydrogenase / GMP reductase domain GII88_RS06400 PF12758 Protein of unknown function (DUF3813) GII88_RS06410 PF00326 Prolyl oligopeptidase family GII88_RS06415 PF01883 Iron-sulfur cluster assembly protein GII88_RS06425 PF01118 Semialdehyde dehydrogenase, NAD binding domain GII88_RS06425 PF02774 Semialdehyde dehydrogenase, dimerisation domain GII88_RS06430 PF01960 ArgJ family GII88_RS06435 PF00696 Amino acid kinase family GII88_RS06440 PF00202 Aminotransferase class-III GII88_RS06445 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GII88_RS06445 PF00117 Glutamine amidotransferase class-I GII88_RS06450 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GII88_RS06450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII88_RS06455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GII88_RS06455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GII88_RS06460 PF02673 Bacitracin resistance protein BacA GII88_RS06465 PF14168 YjzC-like protein GII88_RS06485 PF02608 ABC transporter substrate-binding protein PnrA-like GII88_RS06490 PF10815 ComZ GII88_RS06500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GII88_RS06500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GII88_RS06505 PF00109 Beta-ketoacyl synthase, N-terminal domain GII88_RS06505 PF02801 Beta-ketoacyl synthase, C-terminal domain GII88_RS06510 PF10026 Predicted Zn-dependent protease (DUF2268) GII88_RS06515 PF00005 ABC transporter GII88_RS06515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS06520 PF00005 ABC transporter GII88_RS06520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS06525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII88_RS06530 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS06535 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS06535 PF12911 N-terminal TM domain of oligopeptide transport permease C GII88_RS06545 PF02441 Flavoprotein GII88_RS06555 PF12227 Protein of unknown function (DUF3603) GII88_RS06560 PF00579 tRNA synthetases class I (W and Y) GII88_RS06565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII88_RS06570 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS06575 PF12911 N-terminal TM domain of oligopeptide transport permease C GII88_RS06575 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS06580 PF00005 ABC transporter GII88_RS06580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS06585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS06585 PF00005 ABC transporter GII88_RS06590 PF13508 Acetyltransferase (GNAT) domain GII88_RS06595 PF03960 ArsC family GII88_RS06600 PF03741 Integral membrane protein TerC family GII88_RS06610 PF05389 Negative regulator of genetic competence (MecA) GII88_RS06625 PF01970 Tripartite tricarboxylate transporter TctA family GII88_RS06630 PF12431 Transcriptional regulator GII88_RS06630 PF00072 Response regulator receiver domain GII88_RS06635 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII88_RS06635 PF17203 Single cache domain 3 GII88_RS06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS06635 PF00989 PAS fold GII88_RS06640 PF06054 Competence protein CoiA-like family GII88_RS06645 PF01432 Peptidase family M3 GII88_RS06645 PF08439 Oligopeptidase F GII88_RS06655 PF01152 Bacterial-like globin GII88_RS06660 PF01464 Transglycosylase SLT domain GII88_RS06665 PF01928 CYTH domain GII88_RS06675 PF04607 Region found in RelA / SpoT proteins GII88_RS06680 PF01513 ATP-NAD kinase GII88_RS06685 PF00849 RNA pseudouridylate synthase GII88_RS06690 PF00149 Calcineurin-like phosphoesterase GII88_RS06700 PF02254 TrkA-N domain GII88_RS06700 PF02080 TrkA-C domain GII88_RS06700 PF00999 Sodium/hydrogen exchanger family GII88_RS06705 PF03070 TENA/THI-4/PQQC family GII88_RS06710 PF02581 Thiamine monophosphate synthase GII88_RS06715 PF01266 FAD dependent oxidoreductase GII88_RS06720 PF02597 ThiS family GII88_RS06725 PF05690 Thiazole biosynthesis protein ThiG GII88_RS06730 PF00899 ThiF family GII88_RS06735 PF08543 Phosphomethylpyrimidine kinase GII88_RS06745 PF14153 Spore coat protein CotO GII88_RS06750 PF10612 Spore coat protein Z GII88_RS06755 PF10612 Spore coat protein Z GII88_RS06760 PF07552 Spore Coat Protein X and V domain GII88_RS06770 PF07552 Spore Coat Protein X and V domain GII88_RS06775 PF07098 Protein of unknown function (DUF1360) GII88_RS06790 PF14069 Stage VI sporulation protein F GII88_RS06795 PF00580 UvrD/REP helicase N-terminal domain GII88_RS06795 PF13361 UvrD-like helicase C-terminal domain GII88_RS06805 PF09335 SNARE associated Golgi protein GII88_RS06810 PF16363 GDP-mannose 4,6 dehydratase GII88_RS06815 PF00483 Nucleotidyl transferase GII88_RS06820 PF04138 GtrA-like protein GII88_RS06825 PF13673 Acetyltransferase (GNAT) domain GII88_RS06835 PF00756 Putative esterase GII88_RS06855 PF01053 Cys/Met metabolism PLP-dependent enzyme GII88_RS06860 PF01053 Cys/Met metabolism PLP-dependent enzyme GII88_RS06865 PF05684 Protein of unknown function (DUF819) GII88_RS06880 PF00144 Beta-lactamase GII88_RS06880 PF11954 Domain of unknown function (DUF3471) GII88_RS06885 PF04616 Glycosyl hydrolases family 43 GII88_RS06905 PF14602 Hexapeptide repeat of succinyl-transferase GII88_RS06905 PF12464 Maltose acetyltransferase GII88_RS06915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS06915 PF03466 LysR substrate binding domain GII88_RS06920 PF00258 Flavodoxin GII88_RS06920 PF00175 Oxidoreductase NAD-binding domain GII88_RS06920 PF00667 FAD binding domain GII88_RS06925 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII88_RS06925 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GII88_RS06935 PF03466 LysR substrate binding domain GII88_RS06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS06940 PF00892 EamA-like transporter family GII88_RS06945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII88_RS06950 PF16800 IseA DL-endopeptidase inhibitor GII88_RS06955 PF01476 LysM domain GII88_RS06955 PF06725 3D domain GII88_RS06960 PF07690 Major Facilitator Superfamily GII88_RS06965 PF00440 Bacterial regulatory proteins, tetR family GII88_RS06980 PF04634 Protein of unknown function, DUF600 GII88_RS06985 PF04740 LXG domain of WXG superfamily GII88_RS06990 PF05908 Poly-gamma-glutamate hydrolase GII88_RS06995 PF06114 IrrE N-terminal-like domain GII88_RS07000 PF01381 Helix-turn-helix GII88_RS07020 PF01695 IstB-like ATP binding protein GII88_RS07030 PF17356 Phage-like element PBSX protein XtrA GII88_RS07035 PF08281 Sigma-70, region 4 GII88_RS07040 PF03592 Terminase small subunit GII88_RS07040 PF10668 Phage terminase small subunit GII88_RS07045 PF17288 Terminase RNAseH like domain GII88_RS07045 PF04466 Phage terminase large subunit GII88_RS07050 PF04860 Phage portal protein GII88_RS07055 PF14550 Putative phage serine protease XkdF GII88_RS07060 PF05065 Phage capsid family GII88_RS07065 PF11436 Protein of unknown function (DUF3199) GII88_RS07070 PF12206 Domain of unknown function (DUF3599) GII88_RS07075 PF04883 Bacteriophage HK97-gp10, putative tail-component GII88_RS07090 PF04984 Phage tail sheath protein subtilisin-like domain GII88_RS07090 PF17481 Phage tail sheath protein beta-sandwich domain GII88_RS07090 PF17482 Phage tail sheath C-terminal domain GII88_RS07095 PF09393 Phage tail tube protein GII88_RS07100 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GII88_RS07110 PF01464 Transglycosylase SLT domain GII88_RS07115 PF01476 LysM domain GII88_RS07125 PF10844 Protein of unknown function (DUF2577) GII88_RS07130 PF10934 Protein of unknown function (DUF2634) GII88_RS07135 PF04865 Baseplate J-like protein GII88_RS07140 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GII88_RS07160 PF10779 Haemolysin XhlA GII88_RS07165 PF04688 SPP1 phage holin GII88_RS07170 PF01471 Putative peptidoglycan binding domain GII88_RS07170 PF01510 N-acetylmuramoyl-L-alanine amidase GII88_RS07175 PF07729 FCD domain GII88_RS07175 PF00392 Bacterial regulatory proteins, gntR family GII88_RS07180 PF00107 Zinc-binding dehydrogenase GII88_RS07180 PF08240 Alcohol dehydrogenase GroES-like domain GII88_RS07185 PF03786 D-mannonate dehydratase (UxuA) GII88_RS07190 PF00106 short chain dehydrogenase GII88_RS07195 PF08240 Alcohol dehydrogenase GroES-like domain GII88_RS07195 PF00107 Zinc-binding dehydrogenase GII88_RS07200 PF07690 Major Facilitator Superfamily GII88_RS07205 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system GII88_RS07210 PF14171 Toxin SpoIISA, type II toxin-antitoxin system GII88_RS07215 PF01384 Phosphate transporter family GII88_RS07220 PF01865 Protein of unknown function DUF47 GII88_RS07230 PF04854 Protein of unknown function, DUF624 GII88_RS07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS07235 PF06580 Histidine kinase GII88_RS07235 PF02743 Cache domain GII88_RS07235 PF00672 HAMP domain GII88_RS07240 PF00072 Response regulator receiver domain GII88_RS07240 PF12833 Helix-turn-helix domain GII88_RS07245 PF13416 Bacterial extracellular solute-binding protein GII88_RS07250 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS07255 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS07260 PF07470 Glycosyl Hydrolase Family 88 GII88_RS07265 PF12833 Helix-turn-helix domain GII88_RS07270 PF13472 GDSL-like Lipase/Acylhydrolase family GII88_RS07275 PF09224 Domain of unknown function (DUF1961) GII88_RS07280 PF04854 Protein of unknown function, DUF624 GII88_RS07285 PF18370 Rhamnogalacturonan I lyases beta-sheet domain GII88_RS07295 PF13472 GDSL-like Lipase/Acylhydrolase family GII88_RS07300 PF01839 FG-GAP repeat GII88_RS07300 PF18370 Rhamnogalacturonan I lyases beta-sheet domain GII88_RS07305 PF00248 Aldo/keto reductase family GII88_RS07310 PF00657 GDSL-like Lipase/Acylhydrolase GII88_RS07315 PF08532 Beta-galactosidase trimerisation domain GII88_RS07315 PF08533 Beta-galactosidase C-terminal domain GII88_RS07315 PF02449 Beta-galactosidase GII88_RS07325 PF01547 Bacterial extracellular solute-binding protein GII88_RS07330 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS07335 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS07340 PF13520 Amino acid permease GII88_RS07345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII88_RS07355 PF13180 PDZ domain GII88_RS07360 PF03807 NADP oxidoreductase coenzyme F420-dependent GII88_RS07360 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII88_RS07365 PF04951 D-aminopeptidase GII88_RS07370 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS07375 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS07375 PF12911 N-terminal TM domain of oligopeptide transport permease C GII88_RS07380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS07380 PF00005 ABC transporter GII88_RS07385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII88_RS07390 PF17676 LD-carboxypeptidase C-terminal domain GII88_RS07390 PF02016 LD-carboxypeptidase N-terminal domain GII88_RS07400 PF00877 NlpC/P60 family GII88_RS07405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS07405 PF00005 ABC transporter GII88_RS07415 PF03061 Thioesterase superfamily GII88_RS07425 PF00544 Pectate lyase GII88_RS07445 PF12867 DinB superfamily GII88_RS07450 PF00893 Small Multidrug Resistance protein GII88_RS07455 PF00893 Small Multidrug Resistance protein GII88_RS07460 PF01842 ACT domain GII88_RS07460 PF00551 Formyl transferase GII88_RS07465 PF00696 Amino acid kinase family GII88_RS07465 PF01472 PUA domain GII88_RS07470 PF00171 Aldehyde dehydrogenase family GII88_RS07475 PF02566 OsmC-like protein GII88_RS07480 PF01047 MarR family GII88_RS07485 PF02566 OsmC-like protein GII88_RS07495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII88_RS07500 PF00300 Histidine phosphatase superfamily (branch 1) GII88_RS07515 PF01717 Cobalamin-independent synthase, Catalytic domain GII88_RS07515 PF08267 Cobalamin-independent synthase, N-terminal domain GII88_RS07520 PF00082 Subtilase family GII88_RS07525 PF11132 Transcriptional regulator protein (SplA) GII88_RS07530 PF03448 MgtE intracellular N domain GII88_RS07530 PF01769 Divalent cation transporter GII88_RS07530 PF00571 CBS domain GII88_RS07540 PF13411 MerR HTH family regulatory protein GII88_RS07555 PF01047 MarR family GII88_RS07560 PF01068 ATP dependent DNA ligase domain GII88_RS07565 PF02735 Ku70/Ku80 beta-barrel domain GII88_RS07570 PF00990 Diguanylate cyclase, GGDEF domain GII88_RS07570 PF03707 Bacterial signalling protein N terminal repeat GII88_RS07570 PF00563 EAL domain GII88_RS07575 PF09335 SNARE associated Golgi protein GII88_RS07580 PF03741 Integral membrane protein TerC family GII88_RS07585 PF04542 Sigma-70 region 2 GII88_RS07590 PF12791 Anti-sigma factor N-terminus GII88_RS07595 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII88_RS07600 PF08876 Domain of unknown function (DUF1836) GII88_RS07605 PF01435 Peptidase family M48 GII88_RS07610 PF02386 Cation transport protein GII88_RS07615 PF00905 Penicillin binding protein transpeptidase domain GII88_RS07615 PF05223 NTF2-like N-terminal transpeptidase domain GII88_RS07615 PF03717 Penicillin-binding Protein dimerisation domain GII88_RS07630 PF01757 Acyltransferase family GII88_RS07635 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS07635 PF13188 PAS domain GII88_RS07635 PF00989 PAS fold GII88_RS07635 PF13426 PAS domain GII88_RS07635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS07640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GII88_RS07640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GII88_RS07645 PF01008 Initiation factor 2 subunit family GII88_RS07650 PF01636 Phosphotransferase enzyme family GII88_RS07655 PF00795 Carbon-nitrogen hydrolase GII88_RS07660 PF00155 Aminotransferase class I and II GII88_RS07665 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GII88_RS07665 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GII88_RS07670 PF00596 Class II Aldolase and Adducin N-terminal domain GII88_RS07675 PF03079 ARD/ARD' family GII88_RS07680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII88_RS07685 PF06803 Protein of unknown function (DUF1232) GII88_RS07695 PF02743 Cache domain GII88_RS07695 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS07700 PF01047 MarR family GII88_RS07705 PF00691 OmpA family GII88_RS07705 PF13677 Membrane MotB of proton-channel complex MotA/MotB GII88_RS07710 PF01618 MotA/TolQ/ExbB proton channel family GII88_RS07715 PF07724 AAA domain (Cdc48 subfamily) GII88_RS07715 PF17871 AAA lid domain GII88_RS07715 PF10431 C-terminal, D2-small domain, of ClpB protein GII88_RS07715 PF00004 ATPase family associated with various cellular activities (AAA) GII88_RS07725 PF06508 Queuosine biosynthesis protein QueC GII88_RS07730 PF01242 6-pyruvoyl tetrahydropterin synthase GII88_RS07735 PF04055 Radical SAM superfamily GII88_RS07740 PF14489 QueF-like protein GII88_RS07750 PF05675 Protein of unknown function (DUF817) GII88_RS07755 PF13443 Cro/C1-type HTH DNA-binding domain GII88_RS07760 PF11188 Protein of unknown function (DUF2975) GII88_RS07790 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) GII88_RS07800 PF07486 Cell Wall Hydrolase GII88_RS07805 PF01943 Polysaccharide biosynthesis protein GII88_RS07810 PF00578 AhpC/TSA family GII88_RS07820 PF00557 Metallopeptidase family M24 GII88_RS07820 PF01321 Creatinase/Prolidase N-terminal domain GII88_RS07830 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GII88_RS07830 PF00356 Bacterial regulatory proteins, lacI family GII88_RS07835 PF00874 PRD domain GII88_RS07835 PF03123 CAT RNA binding domain GII88_RS07840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII88_RS07840 PF02378 Phosphotransferase system, EIIC GII88_RS07840 PF00367 phosphotransferase system, EIIB GII88_RS07845 PF00381 PTS HPr component phosphorylation site GII88_RS07850 PF00391 PEP-utilising enzyme, mobile domain GII88_RS07850 PF02896 PEP-utilising enzyme, TIM barrel domain GII88_RS07850 PF05524 PEP-utilising enzyme, N-terminal GII88_RS07855 PF11132 Transcriptional regulator protein (SplA) GII88_RS07865 PF00583 Acetyltransferase (GNAT) family GII88_RS07870 PF00672 HAMP domain GII88_RS07870 PF02743 Cache domain GII88_RS07870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII88_RS07880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GII88_RS07880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII88_RS07885 PF00188 Cysteine-rich secretory protein family GII88_RS07890 PF03717 Penicillin-binding Protein dimerisation domain GII88_RS07890 PF00905 Penicillin binding protein transpeptidase domain GII88_RS07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS07895 PF00989 PAS fold GII88_RS07895 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS07895 PF08447 PAS fold GII88_RS07900 PF00155 Aminotransferase class I and II GII88_RS07905 PF06271 RDD family GII88_RS07915 PF00072 Response regulator receiver domain GII88_RS07915 PF01584 CheW-like domain GII88_RS07920 PF14177 YkyB-like protein GII88_RS07925 PF07690 Major Facilitator Superfamily GII88_RS07930 PF03734 L,D-transpeptidase catalytic domain GII88_RS07930 PF01476 LysM domain GII88_RS07935 PF10518 TAT (twin-arginine translocation) pathway signal sequence GII88_RS07935 PF00149 Calcineurin-like phosphoesterase GII88_RS07945 PF00563 EAL domain GII88_RS07945 PF10388 EAL-domain associated signalling protein domain GII88_RS07955 PF08796 Protein of unknown function (DUF1797) GII88_RS07960 PF04308 Ribonuclease H-like GII88_RS07965 PF14156 Antirepressor AbbA GII88_RS07975 PF03466 LysR substrate binding domain GII88_RS07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS07980 PF00258 Flavodoxin GII88_RS07990 PF00258 Flavodoxin GII88_RS07995 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GII88_RS07995 PF00132 Bacterial transferase hexapeptide (six repeats) GII88_RS07995 PF14602 Hexapeptide repeat of succinyl-transferase GII88_RS08000 PF07687 Peptidase dimerisation domain GII88_RS08000 PF01546 Peptidase family M20/M25/M40 GII88_RS08005 PF03698 Uncharacterised protein family (UPF0180) GII88_RS08010 PF10417 C-terminal domain of 1-Cys peroxiredoxin GII88_RS08010 PF00578 AhpC/TSA family GII88_RS08015 PF00578 AhpC/TSA family GII88_RS08030 PF12804 MobA-like NTP transferase domain GII88_RS08035 PF00899 ThiF family GII88_RS08040 PF03454 MoeA C-terminal region (domain IV) GII88_RS08040 PF03453 MoeA N-terminal region (domain I and II) GII88_RS08040 PF00994 Probable molybdopterin binding domain GII88_RS08045 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GII88_RS08050 PF02391 MoaE protein GII88_RS08055 PF02597 ThiS family GII88_RS08065 PF00664 ABC transporter transmembrane region GII88_RS08065 PF00005 ABC transporter GII88_RS08070 PF00005 ABC transporter GII88_RS08070 PF00664 ABC transporter transmembrane region GII88_RS08075 PF04893 Yip1 domain GII88_RS08080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GII88_RS08085 PF00005 ABC transporter GII88_RS08090 PF02687 FtsX-like permease family GII88_RS08090 PF12704 MacB-like periplasmic core domain GII88_RS08095 PF08220 DeoR-like helix-turn-helix domain GII88_RS08095 PF00455 DeoR C terminal sensor domain GII88_RS08100 PF00294 pfkB family carbohydrate kinase GII88_RS08105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII88_RS08105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII88_RS08110 PF10502 Signal peptidase, peptidase S26 GII88_RS08125 PF12848 ABC transporter GII88_RS08125 PF00005 ABC transporter GII88_RS08135 PF02073 Thermophilic metalloprotease (M29) GII88_RS08140 PF17447 Uncharacterized YkpC-like GII88_RS08150 PF18277 AbrB C-terminal domain GII88_RS08150 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII88_RS08155 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS08155 PF00989 PAS fold GII88_RS08155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS08160 PF02080 TrkA-C domain GII88_RS08160 PF02254 TrkA-N domain GII88_RS08165 PF01979 Amidohydrolase family GII88_RS08165 PF13382 Adenine deaminase C-terminal domain GII88_RS08170 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GII88_RS08170 PF17770 Ribonuclease J C-terminal domain GII88_RS08170 PF00753 Metallo-beta-lactamase superfamily GII88_RS08175 PF07288 Protein of unknown function (DUF1447) GII88_RS08190 PF01327 Polypeptide deformylase GII88_RS08200 PF10368 Putative cell-wall binding lipoprotein GII88_RS08205 PF00676 Dehydrogenase E1 component GII88_RS08210 PF02780 Transketolase, C-terminal domain GII88_RS08210 PF02779 Transketolase, pyrimidine binding domain GII88_RS08215 PF00364 Biotin-requiring enzyme GII88_RS08215 PF02817 e3 binding domain GII88_RS08215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII88_RS08220 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS08220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII88_RS08230 PF13790 SR1 protein GII88_RS08235 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GII88_RS08235 PF01276 Orn/Lys/Arg decarboxylase, major domain GII88_RS08240 PF05256 Uncharacterised protein family (UPF0223) GII88_RS08245 PF06335 Protein of unknown function (DUF1054) GII88_RS08255 PF00459 Inositol monophosphatase family GII88_RS08260 PF00583 Acetyltransferase (GNAT) family GII88_RS08275 PF04542 Sigma-70 region 2 GII88_RS08275 PF08281 Sigma-70, region 4 GII88_RS08280 PF13490 Putative zinc-finger GII88_RS08290 PF03144 Elongation factor Tu domain 2 GII88_RS08290 PF00679 Elongation factor G C-terminus GII88_RS08290 PF00009 Elongation factor Tu GTP binding domain GII88_RS08290 PF14492 Elongation Factor G, domain II GII88_RS08295 PF14036 YlaH-like protein GII88_RS08300 PF01047 MarR family GII88_RS08305 PF01494 FAD binding domain GII88_RS08310 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) GII88_RS08315 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII88_RS08320 PF02562 PhoH-like protein GII88_RS08320 PF13638 PIN domain GII88_RS08330 PF04960 Glutaminase GII88_RS08335 PF07408 Protein of unknown function (DUF1507) GII88_RS08340 PF01098 Cell cycle protein GII88_RS08345 PF02436 Conserved carboxylase domain GII88_RS08345 PF00289 Biotin carboxylase, N-terminal domain GII88_RS08345 PF00364 Biotin-requiring enzyme GII88_RS08345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII88_RS08345 PF00682 HMGL-like GII88_RS08345 PF02785 Biotin carboxylase C-terminal domain GII88_RS08350 PF02628 Cytochrome oxidase assembly protein GII88_RS08355 PF01040 UbiA prenyltransferase family GII88_RS08360 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GII88_RS08360 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GII88_RS08360 PF00034 Cytochrome c GII88_RS08365 PF00115 Cytochrome C and Quinol oxidase polypeptide I GII88_RS08370 PF00510 Cytochrome c oxidase subunit III GII88_RS08375 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GII88_RS08380 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GII88_RS08385 PF08868 YugN-like family GII88_RS08390 PF00571 CBS domain GII88_RS08395 PF00188 Cysteine-rich secretory protein family GII88_RS08395 PF14504 CAP-associated N-terminal GII88_RS08400 PF14071 Putative coat protein GII88_RS08405 PF14003 YlbE-like protein GII88_RS08410 PF06133 Control of competence regulator ComK, YlbF/YmcA GII88_RS08415 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) GII88_RS08425 PF01467 Cytidylyltransferase-like GII88_RS08430 PF07670 Nucleoside recognition GII88_RS08435 PF13180 PDZ domain GII88_RS08435 PF05362 Lon protease (S16) C-terminal proteolytic domain GII88_RS08440 PF05636 HIGH Nucleotidyl Transferase GII88_RS08445 PF02620 Large ribosomal RNA subunit accumulation protein YceD GII88_RS08450 PF01783 Ribosomal L32p protein family GII88_RS08460 PF00583 Acetyltransferase (GNAT) family GII88_RS08465 PF02558 Ketopantoate reductase PanE/ApbA GII88_RS08465 PF08546 Ketopantoate reductase PanE/ApbA C terminal GII88_RS08470 PF10079 Bacillithiol biosynthesis BshC GII88_RS08475 PF02381 MraZ protein, putative antitoxin-like GII88_RS08480 PF01795 MraW methylase family GII88_RS08490 PF03717 Penicillin-binding Protein dimerisation domain GII88_RS08490 PF00905 Penicillin binding protein transpeptidase domain GII88_RS08490 PF03793 PASTA domain GII88_RS08495 PF00905 Penicillin binding protein transpeptidase domain GII88_RS08495 PF03793 PASTA domain GII88_RS08495 PF03717 Penicillin-binding Protein dimerisation domain GII88_RS08500 PF08245 Mur ligase middle domain GII88_RS08500 PF02875 Mur ligase family, glutamate ligase domain GII88_RS08500 PF01225 Mur ligase family, catalytic domain GII88_RS08505 PF00953 Glycosyl transferase family 4 GII88_RS08505 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GII88_RS08510 PF02875 Mur ligase family, glutamate ligase domain GII88_RS08510 PF08245 Mur ligase middle domain GII88_RS08515 PF01098 Cell cycle protein GII88_RS08520 PF03033 Glycosyltransferase family 28 N-terminal domain GII88_RS08520 PF04101 Glycosyltransferase family 28 C-terminal domain GII88_RS08525 PF01565 FAD binding domain GII88_RS08525 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GII88_RS08530 PF08478 POTRA domain, FtsQ-type GII88_RS08535 PF05949 Bacterial protein of unknown function (DUF881) GII88_RS08540 PF05949 Bacterial protein of unknown function (DUF881) GII88_RS08545 PF06947 Protein of unknown function (DUF1290) GII88_RS08550 PF02491 SHS2 domain inserted in FTSA GII88_RS08555 PF00091 Tubulin/FtsZ family, GTPase domain GII88_RS08555 PF12327 FtsZ family, C-terminal domain GII88_RS08565 PF05922 Peptidase inhibitor I9 GII88_RS08565 PF00082 Subtilase family GII88_RS08570 PF00082 Subtilase family GII88_RS08570 PF05922 Peptidase inhibitor I9 GII88_RS08575 PF03419 Sporulation factor SpoIIGA GII88_RS08580 PF04545 Sigma-70, region 4 GII88_RS08580 PF04542 Sigma-70 region 2 GII88_RS08585 PF04545 Sigma-70, region 4 GII88_RS08585 PF04539 Sigma-70 region 3 GII88_RS08585 PF04542 Sigma-70 region 2 GII88_RS08590 PF00005 ABC transporter GII88_RS08595 PF08241 Methyltransferase domain GII88_RS08600 PF05239 PRC-barrel domain GII88_RS08605 PF02578 Multi-copper polyphenol oxidoreductase laccase GII88_RS08610 PF01168 Alanine racemase, N-terminal domain GII88_RS08615 PF04472 Cell division protein SepF GII88_RS08620 PF02325 YGGT family GII88_RS08625 PF17774 Putative RNA-binding domain in YlmH GII88_RS08625 PF01479 S4 domain GII88_RS08630 PF05103 DivIVA protein GII88_RS08635 PF08264 Anticodon-binding domain of tRNA GII88_RS08635 PF00133 tRNA synthetases class I (I, L, M and V) GII88_RS08635 PF06827 Zinc finger found in FPG and IleRS GII88_RS08640 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII88_RS08645 PF01252 Signal peptidase (SPase) II GII88_RS08650 PF01479 S4 domain GII88_RS08650 PF00849 RNA pseudouridylate synthase GII88_RS08655 PF00156 Phosphoribosyl transferase domain GII88_RS08660 PF00860 Permease family GII88_RS08665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GII88_RS08665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GII88_RS08670 PF01979 Amidohydrolase family GII88_RS08675 PF00117 Glutamine amidotransferase class-I GII88_RS08675 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GII88_RS08680 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GII88_RS08680 PF02142 MGS-like domain GII88_RS08680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII88_RS08685 PF00175 Oxidoreductase NAD-binding domain GII88_RS08685 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GII88_RS08690 PF01180 Dihydroorotate dehydrogenase GII88_RS08695 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GII88_RS08700 PF00156 Phosphoribosyl transferase domain GII88_RS08710 PF01507 Phosphoadenosine phosphosulfate reductase family GII88_RS08715 PF01384 Phosphate transporter family GII88_RS08720 PF01747 ATP-sulfurylase GII88_RS08720 PF14306 PUA-like domain GII88_RS08730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII88_RS08735 PF01903 CbiX GII88_RS08745 PF05670 NFACT protein RNA binding domain GII88_RS08750 PF00690 Cation transporter/ATPase, N-terminus GII88_RS08750 PF00689 Cation transporting ATPase, C-terminus GII88_RS08755 PF08340 Domain of unknown function (DUF1732) GII88_RS08755 PF03755 YicC-like family, N-terminal region GII88_RS08760 PF04025 Domain of unknown function (DUF370) GII88_RS08765 PF00625 Guanylate kinase GII88_RS08770 PF01192 RNA polymerase Rpb6 GII88_RS08775 PF02441 Flavoprotein GII88_RS08775 PF04127 DNA / pantothenate metabolism flavoprotein GII88_RS08780 PF00271 Helicase conserved C-terminal domain GII88_RS08780 PF04851 Type III restriction enzyme, res subunit GII88_RS08780 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GII88_RS08780 PF17764 3′ DNA-binding domain (3′BD) GII88_RS08780 PF18074 Primosomal protein N C-terminal domain GII88_RS08785 PF01327 Polypeptide deformylase GII88_RS08790 PF02911 Formyl transferase, C-terminal domain GII88_RS08790 PF00551 Formyl transferase GII88_RS08795 PF01029 NusB family GII88_RS08795 PF01189 16S rRNA methyltransferase RsmB/F GII88_RS08800 PF04055 Radical SAM superfamily GII88_RS08810 PF00069 Protein kinase domain GII88_RS08810 PF03793 PASTA domain GII88_RS08815 PF03193 RsgA GTPase GII88_RS08815 PF16745 RsgA N-terminal domain GII88_RS08820 PF00834 Ribulose-phosphate 3 epimerase family GII88_RS08825 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain GII88_RS08825 PF04263 Thiamin pyrophosphokinase, catalytic domain GII88_RS08830 PF08183 Stage V sporulation protein family GII88_RS08835 PF00830 Ribosomal L28 family GII88_RS08840 PF03780 Asp23 family, cell envelope-related function GII88_RS08845 PF13684 Dihydroxyacetone kinase family GII88_RS08845 PF02734 DAK2 domain GII88_RS08850 PF03315 Serine dehydratase beta chain GII88_RS08850 PF01842 ACT domain GII88_RS08855 PF03313 Serine dehydratase alpha chain GII88_RS08860 PF00271 Helicase conserved C-terminal domain GII88_RS08860 PF00270 DEAD/DEAH box helicase GII88_RS08860 PF17191 RecG wedge domain GII88_RS08865 PF08279 HTH domain GII88_RS08865 PF03061 Thioesterase superfamily GII88_RS08870 PF02504 Fatty acid synthesis protein GII88_RS08875 PF00698 Acyl transferase domain GII88_RS08885 PF00550 Phosphopantetheine attachment site GII88_RS08890 PF00035 Double-stranded RNA binding motif GII88_RS08890 PF14622 Ribonuclease-III-like GII88_RS08895 PF06470 SMC proteins Flexible Hinge Domain GII88_RS08895 PF02463 RecF/RecN/SMC N terminal domain GII88_RS08900 PF02881 SRP54-type protein, helical bundle domain GII88_RS08900 PF00448 SRP54-type protein, GTPase domain GII88_RS08905 PF04297 Putative helix-turn-helix protein, YlxM / p13 like GII88_RS08910 PF00448 SRP54-type protein, GTPase domain GII88_RS08910 PF02978 Signal peptide binding domain GII88_RS08910 PF02881 SRP54-type protein, helical bundle domain GII88_RS08915 PF00886 Ribosomal protein S16 GII88_RS08925 PF11068 YlqD protein GII88_RS08930 PF05239 PRC-barrel domain GII88_RS08930 PF01782 RimM N-terminal domain GII88_RS08935 PF01746 tRNA (Guanine-1)-methyltransferase GII88_RS08940 PF01245 Ribosomal protein L19 GII88_RS08945 PF01926 50S ribosome-binding GTPase GII88_RS08950 PF01351 Ribonuclease HII GII88_RS08960 PF01312 FlhB HrpN YscU SpaS Family GII88_RS08965 PF00549 CoA-ligase GII88_RS08965 PF08442 ATP-grasp domain GII88_RS08970 PF02629 CoA binding domain GII88_RS08970 PF00549 CoA-ligase GII88_RS08975 PF02481 DNA recombination-mediator protein A GII88_RS08980 PF01131 DNA topoisomerase GII88_RS08980 PF01396 Topoisomerase DNA binding C4 zinc finger GII88_RS08980 PF01751 Toprim domain GII88_RS08985 PF01134 Glucose inhibited division protein A GII88_RS08990 PF02899 Phage integrase, N-terminal SAM-like domain GII88_RS08990 PF00589 Phage integrase family GII88_RS08995 PF00227 Proteasome subunit GII88_RS09000 PF07724 AAA domain (Cdc48 subfamily) GII88_RS09000 PF00004 ATPase family associated with various cellular activities (AAA) GII88_RS09000 PF10431 C-terminal, D2-small domain, of ClpB protein GII88_RS09005 PF06018 CodY GAF-like domain GII88_RS09005 PF08222 CodY helix-turn-helix domain GII88_RS09010 PF00460 Flagella basal body rod protein GII88_RS09015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII88_RS09015 PF00460 Flagella basal body rod protein GII88_RS09020 PF02049 Flagellar hook-basal body complex protein FliE GII88_RS09025 PF08345 Flagellar M-ring protein C-terminal GII88_RS09025 PF01514 Secretory protein of YscJ/FliF family GII88_RS09030 PF14842 FliG N-terminal domain GII88_RS09030 PF14841 FliG middle domain GII88_RS09030 PF01706 FliG C-terminal domain GII88_RS09035 PF02108 Flagellar assembly protein FliH GII88_RS09040 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII88_RS09040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII88_RS09040 PF18269 T3SS EscN ATPase C-terminal domain GII88_RS09045 PF02050 Flagellar FliJ protein GII88_RS09055 PF02120 Flagellar hook-length control protein FliK GII88_RS09060 PF03963 Flagellar hook capping protein - N-terminal region GII88_RS09065 PF00460 Flagella basal body rod protein GII88_RS09065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII88_RS09070 PF06289 Flagellar and Swarming motility proteins GII88_RS09075 PF03748 Flagellar basal body-associated protein FliL GII88_RS09080 PF02154 Flagellar motor switch protein FliM GII88_RS09080 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GII88_RS09085 PF04509 CheC-like family GII88_RS09085 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GII88_RS09090 PF00072 Response regulator receiver domain GII88_RS09095 PF04347 Flagellar biosynthesis protein, FliO GII88_RS09100 PF00813 FliP family GII88_RS09105 PF01313 Bacterial export proteins, family 3 GII88_RS09110 PF01311 Bacterial export proteins, family 1 GII88_RS09115 PF01312 FlhB HrpN YscU SpaS Family GII88_RS09120 PF00771 FHIPEP family GII88_RS09125 PF00448 SRP54-type protein, GTPase domain GII88_RS09130 PF10609 NUBPL iron-transfer P-loop NTPase GII88_RS09135 PF01339 CheB methylesterase GII88_RS09135 PF00072 Response regulator receiver domain GII88_RS09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS09140 PF01627 Hpt domain GII88_RS09140 PF01584 CheW-like domain GII88_RS09140 PF07194 P2 response regulator binding domain GII88_RS09140 PF02895 Signal transducing histidine kinase, homodimeric domain GII88_RS09145 PF01584 CheW-like domain GII88_RS09150 PF04509 CheC-like family GII88_RS09155 PF03975 CheD chemotactic sensory transduction GII88_RS09160 PF04542 Sigma-70 region 2 GII88_RS09160 PF04539 Sigma-70 region 3 GII88_RS09160 PF04545 Sigma-70, region 4 GII88_RS09170 PF00318 Ribosomal protein S2 GII88_RS09175 PF00889 Elongation factor TS GII88_RS09180 PF00696 Amino acid kinase family GII88_RS09185 PF01765 Ribosome recycling factor GII88_RS09190 PF01255 Putative undecaprenyl diphosphate synthase GII88_RS09200 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GII88_RS09200 PF13288 DXP reductoisomerase C-terminal domain GII88_RS09200 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GII88_RS09205 PF17820 PDZ domain GII88_RS09205 PF02163 Peptidase family M50 GII88_RS09210 PF04073 Aminoacyl-tRNA editing domain GII88_RS09210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII88_RS09210 PF03129 Anticodon binding domain GII88_RS09215 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII88_RS09215 PF02811 PHP domain GII88_RS09215 PF14480 DNA polymerase III polC-type N-terminus I GII88_RS09215 PF11490 DNA polymerase III polC-type N-terminus II GII88_RS09215 PF14579 Helix-hairpin-helix motif GII88_RS09215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII88_RS09215 PF00929 Exonuclease GII88_RS09225 PF00942 Cellulose binding domain GII88_RS09225 PF00759 Glycosyl hydrolase family 9 GII88_RS09230 PF00942 Cellulose binding domain GII88_RS09230 PF00759 Glycosyl hydrolase family 9 GII88_RS09230 PF02011 Glycosyl hydrolase family 48 GII88_RS09235 PF00150 Cellulase (glycosyl hydrolase family 5) GII88_RS09235 PF03442 Carbohydrate binding domain X2 GII88_RS09235 PF18448 Carbohydrate binding domain GII88_RS09245 PF17384 RimP C-terminal SH3 domain GII88_RS09245 PF02576 RimP N-terminal domain GII88_RS09250 PF13184 NusA-like KH domain GII88_RS09250 PF00575 S1 RNA binding domain GII88_RS09250 PF08529 NusA N-terminal domain GII88_RS09255 PF04296 Protein of unknown function (DUF448) GII88_RS09260 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GII88_RS09265 PF11987 Translation-initiation factor 2 GII88_RS09265 PF00009 Elongation factor Tu GTP binding domain GII88_RS09265 PF04760 Translation initiation factor IF-2, N-terminal region GII88_RS09270 PF04456 Protein of unknown function (DUF503) GII88_RS09275 PF02033 Ribosome-binding factor A GII88_RS09280 PF01509 TruB family pseudouridylate synthase (N terminal domain) GII88_RS09280 PF16198 tRNA pseudouridylate synthase B C-terminal domain GII88_RS09285 PF06574 FAD synthetase GII88_RS09285 PF01687 Riboflavin kinase GII88_RS09290 PF00312 Ribosomal protein S15 GII88_RS09295 PF00575 S1 RNA binding domain GII88_RS09295 PF03725 3' exoribonuclease family, domain 2 GII88_RS09295 PF01138 3' exoribonuclease family, domain 1 GII88_RS09295 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GII88_RS09295 PF00013 KH domain GII88_RS09300 PF01522 Polysaccharide deacetylase GII88_RS09305 PF05193 Peptidase M16 inactive domain GII88_RS09305 PF00675 Insulinase (Peptidase family M16) GII88_RS09310 PF05239 PRC-barrel domain GII88_RS09315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GII88_RS09315 PF16924 Dipicolinate synthase subunit A N-terminal domain GII88_RS09320 PF02441 Flavoprotein GII88_RS09325 PF02774 Semialdehyde dehydrogenase, dimerisation domain GII88_RS09325 PF01118 Semialdehyde dehydrogenase, NAD binding domain GII88_RS09330 PF13840 ACT domain GII88_RS09330 PF00696 Amino acid kinase family GII88_RS09335 PF00701 Dihydrodipicolinate synthetase family GII88_RS09340 PF00753 Metallo-beta-lactamase superfamily GII88_RS09340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GII88_RS09340 PF17770 Ribonuclease J C-terminal domain GII88_RS09345 PF00574 Clp protease GII88_RS09350 PF14035 YlzJ-like protein GII88_RS09355 PF01580 FtsK/SpoIIIE family GII88_RS09355 PF09397 Ftsk gamma domain GII88_RS09355 PF17854 FtsK alpha domain GII88_RS09360 PF00392 Bacterial regulatory proteins, gntR family GII88_RS09360 PF07702 UTRA domain GII88_RS09365 PF07690 Major Facilitator Superfamily GII88_RS09370 PF05193 Peptidase M16 inactive domain GII88_RS09375 PF05193 Peptidase M16 inactive domain GII88_RS09375 PF00675 Insulinase (Peptidase family M16) GII88_RS09385 PF11588 Protein of unknown function (DUF3243) GII88_RS09390 PF11868 Protein of unknown function (DUF3388) GII88_RS09395 PF13464 Domain of unknown function (DUF4115) GII88_RS09400 PF01066 CDP-alcohol phosphatidyltransferase GII88_RS09405 PF02464 Competence-damaged protein GII88_RS09405 PF00994 Probable molybdopterin binding domain GII88_RS09405 PF18146 Damage-inducible protein CinA KH domain GII88_RS09410 PF00154 recA bacterial DNA recombination protein GII88_RS09415 PF12072 Domain of unknown function (DUF3552) GII88_RS09415 PF00013 KH domain GII88_RS09415 PF01966 HD domain GII88_RS09420 PF13277 YmdB-like protein GII88_RS09425 PF04232 Stage V sporulation protein S (SpoVS) GII88_RS09430 PF01244 Membrane dipeptidase (Peptidase family M19) GII88_RS09435 PF08240 Alcohol dehydrogenase GroES-like domain GII88_RS09435 PF00107 Zinc-binding dehydrogenase GII88_RS09440 PF00155 Aminotransferase class I and II GII88_RS09445 PF01938 TRAM domain GII88_RS09445 PF00919 Uncharacterized protein family UPF0004 GII88_RS09445 PF04055 Radical SAM superfamily GII88_RS09450 PF06133 Control of competence regulator ComK, YlbF/YmcA GII88_RS09455 PF10628 Outer spore coat protein E (CotE) GII88_RS09460 PF05192 MutS domain III GII88_RS09460 PF01624 MutS domain I GII88_RS09460 PF00488 MutS domain V GII88_RS09460 PF05188 MutS domain II GII88_RS09460 PF05190 MutS family domain IV GII88_RS09465 PF01119 DNA mismatch repair protein, C-terminal domain GII88_RS09465 PF08676 MutL C terminal dimerisation domain GII88_RS09470 PF03992 Antibiotic biosynthesis monooxygenase GII88_RS09475 PF04740 LXG domain of WXG superfamily GII88_RS09475 PF14449 Pre-toxin TG GII88_RS09490 PF07683 Cobalamin synthesis protein cobW C-terminal domain GII88_RS09490 PF02492 CobW/HypB/UreG, nucleotide-binding domain GII88_RS09500 PF00583 Acetyltransferase (GNAT) family GII88_RS09515 PF01593 Flavin containing amine oxidoreductase GII88_RS09520 PF06912 Protein of unknown function (DUF1275) GII88_RS09525 PF02080 TrkA-C domain GII88_RS09525 PF00999 Sodium/hydrogen exchanger family GII88_RS09525 PF03471 Transporter associated domain GII88_RS09545 PF01906 Putative heavy-metal-binding GII88_RS09550 PF09335 SNARE associated Golgi protein GII88_RS09555 PF00144 Beta-lactamase GII88_RS09555 PF11954 Domain of unknown function (DUF3471) GII88_RS09560 PF04101 Glycosyltransferase family 28 C-terminal domain GII88_RS09565 PF13520 Amino acid permease GII88_RS09570 PF07875 Coat F domain GII88_RS09585 PF00440 Bacterial regulatory proteins, tetR family GII88_RS09590 PF12680 SnoaL-like domain GII88_RS09595 PF01370 NAD dependent epimerase/dehydratase family GII88_RS09605 PF02566 OsmC-like protein GII88_RS09610 PF00893 Small Multidrug Resistance protein GII88_RS09615 PF00893 Small Multidrug Resistance protein GII88_RS09625 PF12788 YmaF family GII88_RS09635 PF17209 Hfq protein GII88_RS09650 PF07972 NrdI Flavodoxin like GII88_RS09655 PF00317 Ribonucleotide reductase, all-alpha domain GII88_RS09655 PF02867 Ribonucleotide reductase, barrel domain GII88_RS09655 PF08343 Ribonucleotide reductase N-terminal GII88_RS09660 PF00268 Ribonucleotide reductase, small chain GII88_RS09670 PF00753 Metallo-beta-lactamase superfamily GII88_RS09675 PF01592 NifU-like N terminal domain GII88_RS09680 PF01475 Ferric uptake regulator family GII88_RS09685 PF07729 FCD domain GII88_RS09685 PF00392 Bacterial regulatory proteins, gntR family GII88_RS09690 PF13536 Putative multidrug resistance efflux transporter GII88_RS09695 PF01520 N-acetylmuramoyl-L-alanine amidase GII88_RS09695 PF05036 Sporulation related domain GII88_RS09725 PF00440 Bacterial regulatory proteins, tetR family GII88_RS09740 PF05378 Hydantoinase/oxoprolinase N-terminal region GII88_RS09740 PF01968 Hydantoinase/oxoprolinase GII88_RS09750 PF02538 Hydantoinase B/oxoprolinase GII88_RS09775 PF17866 AAA lid domain GII88_RS09775 PF00004 ATPase family associated with various cellular activities (AAA) GII88_RS09780 PF01926 50S ribosome-binding GTPase GII88_RS09780 PF13167 GTP-binding GTPase N-terminal GII88_RS09780 PF16360 GTP-binding GTPase Middle Region GII88_RS09785 PF06838 Methionine gamma-lyase GII88_RS09790 PF13411 MerR HTH family regulatory protein GII88_RS09795 PF03951 Glutamine synthetase, beta-Grasp domain GII88_RS09795 PF00120 Glutamine synthetase, catalytic domain GII88_RS09820 PF01230 HIT domain GII88_RS09855 PF16302 Domain of unknown function (DUF4944) GII88_RS09875 PF17934 Tetracyclin repressor-like, C-terminal domain GII88_RS09875 PF00440 Bacterial regulatory proteins, tetR family GII88_RS09880 PF00893 Small Multidrug Resistance protein GII88_RS09885 PF00893 Small Multidrug Resistance protein GII88_RS09890 PF13302 Acetyltransferase (GNAT) domain GII88_RS09910 PF05067 Manganese containing catalase GII88_RS09930 PF00440 Bacterial regulatory proteins, tetR family GII88_RS09930 PF08360 QacR-like protein, C-terminal region GII88_RS09935 PF01047 MarR family GII88_RS09940 PF00881 Nitroreductase family GII88_RS09945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII88_RS09950 PF01613 Flavin reductase like domain GII88_RS09955 PF03358 NADPH-dependent FMN reductase GII88_RS09970 PF00303 Thymidylate synthase GII88_RS09975 PF14040 Deoxyribonuclease NucA/NucB GII88_RS09980 PF01726 LexA DNA binding domain GII88_RS09980 PF00717 Peptidase S24-like GII88_RS09985 PF01476 LysM domain GII88_RS09990 PF00239 Resolvase, N terminal domain GII88_RS09995 PF05979 Bacterial protein of unknown function (DUF896) GII88_RS10000 PF00456 Transketolase, thiamine diphosphate binding domain GII88_RS10000 PF02779 Transketolase, pyrimidine binding domain GII88_RS10000 PF02780 Transketolase, C-terminal domain GII88_RS10005 PF10747 Sporulation inhibitor of replication protein SirA GII88_RS10010 PF03672 Uncharacterised protein family (UPF0154) GII88_RS10015 PF09388 Spo0E like sporulation regulatory protein GII88_RS10020 PF02683 Cytochrome C biogenesis protein transmembrane region GII88_RS10025 PF00072 Response regulator receiver domain GII88_RS10030 PF07301 Protein of unknown function (DUF1453) GII88_RS10035 PF11084 Protein of unknown function (DUF2621) GII88_RS10045 PF08179 Small acid-soluble spore protein P family GII88_RS10055 PF00694 Aconitase C-terminal domain GII88_RS10055 PF00330 Aconitase family (aconitate hydratase) GII88_RS10060 PF00578 AhpC/TSA family GII88_RS10065 PF13040 Fur-regulated basic protein B GII88_RS10070 PF08177 Small acid-soluble spore protein N family GII88_RS10080 PF03061 Thioesterase superfamily GII88_RS10105 PF01521 Iron-sulphur cluster biosynthesis GII88_RS10110 PF02660 Glycerol-3-phosphate acyltransferase GII88_RS10115 PF13380 CoA binding domain GII88_RS10120 PF00204 DNA gyrase B GII88_RS10120 PF00986 DNA gyrase B subunit, carboxyl terminus GII88_RS10120 PF01751 Toprim domain GII88_RS10120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS10125 PF03989 DNA gyrase C-terminal domain, beta-propeller GII88_RS10125 PF00521 DNA gyrase/topoisomerase IV, subunit A GII88_RS10130 PF00392 Bacterial regulatory proteins, gntR family GII88_RS10140 PF00596 Class II Aldolase and Adducin N-terminal domain GII88_RS10145 PF02610 L-arabinose isomerase GII88_RS10145 PF11762 L-arabinose isomerase C-terminal domain GII88_RS10150 PF00083 Sugar (and other) transporter GII88_RS10155 PF00106 short chain dehydrogenase GII88_RS10165 PF01235 Sodium:alanine symporter family GII88_RS10175 PF02665 Nitrate reductase gamma subunit GII88_RS10180 PF02613 Nitrate reductase delta subunit GII88_RS10185 PF13247 4Fe-4S dicluster domain GII88_RS10185 PF14711 Respiratory nitrate reductase beta C-terminal GII88_RS10190 PF14710 Respiratory nitrate reductase alpha N-terminal GII88_RS10190 PF01568 Molydopterin dinucleotide binding domain GII88_RS10190 PF00384 Molybdopterin oxidoreductase GII88_RS10205 PF04055 Radical SAM superfamily GII88_RS10205 PF13186 Iron-sulfur cluster-binding domain GII88_RS10215 PF14256 YwiC-like protein GII88_RS10220 PF00027 Cyclic nucleotide-binding domain GII88_RS10220 PF00325 Bacterial regulatory proteins, crp family GII88_RS10225 PF07690 Major Facilitator Superfamily GII88_RS10235 PF13545 Crp-like helix-turn-helix domain GII88_RS10235 PF00027 Cyclic nucleotide-binding domain GII88_RS10240 PF00115 Cytochrome C and Quinol oxidase polypeptide I GII88_RS10245 PF01814 Hemerythrin HHE cation binding domain GII88_RS10245 PF04405 Domain of Unknown function (DUF542) GII88_RS10250 PF07098 Protein of unknown function (DUF1360) GII88_RS10260 PF17452 Uncharacterized YnfE-like GII88_RS10265 PF13302 Acetyltransferase (GNAT) domain GII88_RS10275 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS10290 PF13229 Right handed beta helix region GII88_RS10295 PF05525 Branched-chain amino acid transport protein GII88_RS10300 PF08240 Alcohol dehydrogenase GroES-like domain GII88_RS10300 PF00107 Zinc-binding dehydrogenase GII88_RS10305 PF13411 MerR HTH family regulatory protein GII88_RS10315 PF12706 Beta-lactamase superfamily domain GII88_RS10330 PF00378 Enoyl-CoA hydratase/isomerase GII88_RS10335 PF00171 Aldehyde dehydrogenase family GII88_RS10340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GII88_RS10340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII88_RS10345 PF02770 Acyl-CoA dehydrogenase, middle domain GII88_RS10345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII88_RS10345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII88_RS10350 PF01238 Phosphomannose isomerase type I GII88_RS10355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII88_RS10355 PF02378 Phosphotransferase system, EIIC GII88_RS10355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII88_RS10375 PF05043 Mga helix-turn-helix domain GII88_RS10375 PF00874 PRD domain GII88_RS10375 PF08279 HTH domain GII88_RS10375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII88_RS10385 PF00005 ABC transporter GII88_RS10390 PF00392 Bacterial regulatory proteins, gntR family GII88_RS10395 PF00106 short chain dehydrogenase GII88_RS10400 PF03786 D-mannonate dehydratase (UxuA) GII88_RS10405 PF16338 Domain of unknown function (DUF4968) GII88_RS10405 PF01055 Glycosyl hydrolases family 31 GII88_RS10405 PF13802 Galactose mutarotase-like GII88_RS10405 PF17137 Domain of unknown function (DUF5110) GII88_RS10410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GII88_RS10415 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GII88_RS10420 PF03480 Bacterial extracellular solute-binding protein, family 7 GII88_RS10425 PF00356 Bacterial regulatory proteins, lacI family GII88_RS10430 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII88_RS10435 PF02040 Arsenical pump membrane protein GII88_RS10440 PF01022 Bacterial regulatory protein, arsR family GII88_RS10445 PF08818 Domain of unknown function (DU1801) GII88_RS10455 PF06800 Sugar transport protein GII88_RS10460 PF02638 Glycosyl hydrolase-like 10 GII88_RS10470 PF04055 Radical SAM superfamily GII88_RS10475 PF01228 Glycine radical GII88_RS10475 PF02901 Pyruvate formate lyase-like GII88_RS10480 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GII88_RS10485 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS10490 PF07849 Protein of unknown function (DUF1641) GII88_RS10500 PF12728 Helix-turn-helix domain GII88_RS10510 PF16177 Acetyl-coenzyme A synthetase N-terminus GII88_RS10510 PF00501 AMP-binding enzyme GII88_RS10510 PF13193 AMP-binding enzyme C-terminal domain GII88_RS10515 PF01039 Carboxyl transferase domain GII88_RS10520 PF00378 Enoyl-CoA hydratase/isomerase GII88_RS10525 PF00682 HMGL-like GII88_RS10530 PF00364 Biotin-requiring enzyme GII88_RS10535 PF02785 Biotin carboxylase C-terminal domain GII88_RS10535 PF00289 Biotin carboxylase, N-terminal domain GII88_RS10535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII88_RS10540 PF00501 AMP-binding enzyme GII88_RS10540 PF13193 AMP-binding enzyme C-terminal domain GII88_RS10545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII88_RS10545 PF02770 Acyl-CoA dehydrogenase, middle domain GII88_RS10545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII88_RS10550 PF02525 Flavodoxin-like fold GII88_RS10555 PF01638 HxlR-like helix-turn-helix GII88_RS10560 PF00171 Aldehyde dehydrogenase family GII88_RS10565 PF00696 Amino acid kinase family GII88_RS10565 PF01472 PUA domain GII88_RS10570 PF03807 NADP oxidoreductase coenzyme F420-dependent GII88_RS10570 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII88_RS10575 PF04239 Protein of unknown function (DUF421) GII88_RS10585 PF01384 Phosphate transporter family GII88_RS10590 PF01507 Phosphoadenosine phosphosulfate reductase family GII88_RS10595 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) GII88_RS10600 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII88_RS10605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII88_RS10605 PF13378 Enolase C-terminal domain-like GII88_RS10610 PF07690 Major Facilitator Superfamily GII88_RS10615 PF00535 Glycosyl transferase family 2 GII88_RS10630 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS10630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GII88_RS10635 PF01645 Conserved region in glutamate synthase GII88_RS10635 PF01493 GXGXG motif GII88_RS10635 PF04898 Glutamate synthase central domain GII88_RS10635 PF00310 Glutamine amidotransferases class-II GII88_RS10640 PF03466 LysR substrate binding domain GII88_RS10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS10660 PF01047 MarR family GII88_RS10665 PF00664 ABC transporter transmembrane region GII88_RS10665 PF00005 ABC transporter GII88_RS10670 PF00005 ABC transporter GII88_RS10670 PF00664 ABC transporter transmembrane region GII88_RS10675 PF00067 Cytochrome P450 GII88_RS10680 PF00106 short chain dehydrogenase GII88_RS10685 PF00391 PEP-utilising enzyme, mobile domain GII88_RS10685 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GII88_RS10695 PF07690 Major Facilitator Superfamily GII88_RS10700 PF00384 Molybdopterin oxidoreductase GII88_RS10700 PF01568 Molydopterin dinucleotide binding domain GII88_RS10700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII88_RS10705 PF01047 MarR family GII88_RS10715 PF03845 Spore germination protein GII88_RS10720 PF05504 Spore germination B3/ GerAC like, C-terminal GII88_RS10725 PF03845 Spore germination protein GII88_RS10730 PF03845 Spore germination protein GII88_RS10735 PF03323 Bacillus/Clostridium GerA spore germination protein GII88_RS10740 PF00005 ABC transporter GII88_RS10740 PF12848 ABC transporter GII88_RS10745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII88_RS10745 PF00672 HAMP domain GII88_RS10745 PF02743 Cache domain GII88_RS10750 PF01588 Putative tRNA binding domain GII88_RS10755 PF00082 Subtilase family GII88_RS10765 PF00440 Bacterial regulatory proteins, tetR family GII88_RS10765 PF17932 Tetracyclin repressor-like, C-terminal domain GII88_RS10770 PF01047 MarR family GII88_RS10775 PF01966 HD domain GII88_RS10785 PF14158 YndJ-like protein GII88_RS10790 PF13761 Domain of unknown function (DUF4166) GII88_RS10800 PF00440 Bacterial regulatory proteins, tetR family GII88_RS10800 PF13305 Tetracyclin repressor-like, C-terminal domain GII88_RS10805 PF00753 Metallo-beta-lactamase superfamily GII88_RS10810 PF06445 GyrI-like small molecule binding domain GII88_RS10820 PF08279 HTH domain GII88_RS10820 PF13280 WYL domain GII88_RS10830 PF01022 Bacterial regulatory protein, arsR family GII88_RS10845 PF00324 Amino acid permease GII88_RS10855 PF02719 Polysaccharide biosynthesis protein GII88_RS10870 PF00534 Glycosyl transferases group 1 GII88_RS10875 PF04238 Protein of unknown function (DUF420) GII88_RS10890 PF00474 Sodium:solute symporter family GII88_RS10895 PF06725 3D domain GII88_RS10895 PF01476 LysM domain GII88_RS10900 PF16124 RecQ zinc-binding GII88_RS10900 PF00271 Helicase conserved C-terminal domain GII88_RS10900 PF00570 HRDC domain GII88_RS10900 PF00270 DEAD/DEAH box helicase GII88_RS10900 PF09382 RQC domain GII88_RS10920 PF04237 YjbR GII88_RS10940 PF07849 Protein of unknown function (DUF1641) GII88_RS10960 PF12945 Flagellar protein YcgR GII88_RS10960 PF07238 PilZ domain GII88_RS10985 PF13217 Protein of unknown function (DUF4025) GII88_RS10990 PF05504 Spore germination B3/ GerAC like, C-terminal GII88_RS11005 PF01979 Amidohydrolase family GII88_RS11010 PF11122 Inner spore coat protein D GII88_RS11020 PF00561 alpha/beta hydrolase fold GII88_RS11020 PF08386 TAP-like protein GII88_RS11030 PF11122 Inner spore coat protein D GII88_RS11035 PF01810 LysE type translocator GII88_RS11040 PF00253 Ribosomal protein S14p/S29e GII88_RS11045 PF00293 NUDIX domain GII88_RS11045 PF13344 Haloacid dehalogenase-like hydrolase GII88_RS11050 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GII88_RS11050 PF00391 PEP-utilising enzyme, mobile domain GII88_RS11055 PF00440 Bacterial regulatory proteins, tetR family GII88_RS11065 PF10710 Protein of unknown function (DUF2512) GII88_RS11070 PF05163 DinB family GII88_RS11075 PF02525 Flavodoxin-like fold GII88_RS11080 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII88_RS11085 PF08000 Bacterial PH domain GII88_RS11095 PF00171 Aldehyde dehydrogenase family GII88_RS11100 PF07690 Major Facilitator Superfamily GII88_RS11105 PF01636 Phosphotransferase enzyme family GII88_RS11115 PF13249 Squalene-hopene cyclase N-terminal domain GII88_RS11115 PF13243 Squalene-hopene cyclase C-terminal domain GII88_RS11120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GII88_RS11120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GII88_RS11135 PF00209 Sodium:neurotransmitter symporter family GII88_RS11140 PF01758 Sodium Bile acid symporter family GII88_RS11145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII88_RS11145 PF02817 e3 binding domain GII88_RS11145 PF00364 Biotin-requiring enzyme GII88_RS11150 PF02779 Transketolase, pyrimidine binding domain GII88_RS11150 PF16870 2-oxoglutarate dehydrogenase C-terminal GII88_RS11150 PF00676 Dehydrogenase E1 component GII88_RS11155 PF00092 von Willebrand factor type A domain GII88_RS11160 PF07728 AAA domain (dynein-related subfamily) GII88_RS11165 PF00080 Copper/zinc superoxide dismutase (SODC) GII88_RS11165 PF13627 Prokaryotic lipoprotein-attachment site GII88_RS11170 PF01476 LysM domain GII88_RS11170 PF00877 NlpC/P60 family GII88_RS11180 PF01554 MatE GII88_RS11185 PF02585 GlcNAc-PI de-N-acetylase GII88_RS11190 PF08830 Protein of unknown function (DUF1806) GII88_RS11200 PF00892 EamA-like transporter family GII88_RS11210 PF03330 Lytic transglycolase GII88_RS11225 PF01638 HxlR-like helix-turn-helix GII88_RS11230 PF00881 Nitroreductase family GII88_RS11235 PF01738 Dienelactone hydrolase family GII88_RS11240 PF11755 Protein of unknown function (DUF3311) GII88_RS11245 PF00474 Sodium:solute symporter family GII88_RS11255 PF17820 PDZ domain GII88_RS11255 PF03572 Peptidase family S41 GII88_RS11255 PF01471 Putative peptidoglycan binding domain GII88_RS11260 PF08241 Methyltransferase domain GII88_RS11270 PF02557 D-alanyl-D-alanine carboxypeptidase GII88_RS11275 PF01048 Phosphorylase superfamily GII88_RS11280 PF03773 Predicted permease GII88_RS11295 PF14191 YodL-like GII88_RS11300 PF01569 PAP2 superfamily GII88_RS11305 PF14162 YozD-like protein GII88_RS11315 PF06855 YozE SAM-like fold GII88_RS11320 PF14122 YokU-like protein, putative antitoxin GII88_RS11330 PF11553 Protein of unknown function (DUF3231) GII88_RS11340 PF08719 Domain of unknown function (DUF1768) GII88_RS11365 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII88_RS11380 PF00303 Thymidylate synthase GII88_RS11410 PF00692 dUTPase GII88_RS11430 PF00085 Thioredoxin GII88_RS11440 PF00268 Ribonucleotide reductase, small chain GII88_RS11445 PF00145 C-5 cytosine-specific DNA methylase GII88_RS11455 PF08343 Ribonucleotide reductase N-terminal GII88_RS11455 PF00317 Ribonucleotide reductase, all-alpha domain GII88_RS11455 PF02867 Ribonucleotide reductase, barrel domain GII88_RS11460 PF13392 HNH endonuclease GII88_RS11465 PF02867 Ribonucleotide reductase, barrel domain GII88_RS11465 PF00317 Ribonucleotide reductase, all-alpha domain GII88_RS11465 PF08343 Ribonucleotide reductase N-terminal GII88_RS11470 PF07972 NrdI Flavodoxin like GII88_RS11530 PF01555 DNA methylase GII88_RS11550 PF06725 3D domain GII88_RS11555 PF14579 Helix-hairpin-helix motif GII88_RS11555 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII88_RS11555 PF02811 PHP domain GII88_RS11555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII88_RS11560 PF01368 DHH family GII88_RS11560 PF17768 RecJ OB domain GII88_RS11570 PF03796 DnaB-like helicase C terminal domain GII88_RS11615 PF00149 Calcineurin-like phosphoesterase GII88_RS11640 PF09643 YopX protein GII88_RS11655 PF01068 ATP dependent DNA ligase domain GII88_RS11700 PF06908 YspA SLOG family GII88_RS11715 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GII88_RS11715 PF13538 UvrD-like helicase C-terminal domain GII88_RS11715 PF14490 Helix-hairpin-helix containing domain GII88_RS11740 PF14072 DNA-sulfur modification-associated GII88_RS11745 PF00589 Phage integrase family GII88_RS11745 PF02899 Phage integrase, N-terminal SAM-like domain GII88_RS11775 PF00082 Subtilase family GII88_RS11775 PF05922 Peptidase inhibitor I9 GII88_RS11850 PF13443 Cro/C1-type HTH DNA-binding domain GII88_RS11940 PF00216 Bacterial DNA-binding protein GII88_RS11955 PF09642 YonK protein GII88_RS11975 PF03237 Terminase-like family GII88_RS12070 PF13495 Phage integrase, N-terminal SAM-like domain GII88_RS12070 PF00589 Phage integrase family GII88_RS12125 PF10145 Phage-related minor tail protein GII88_RS12125 PF01551 Peptidase family M23 GII88_RS12125 PF01464 Transglycosylase SLT domain GII88_RS12130 PF01551 Peptidase family M23 GII88_RS12130 PF01464 Transglycosylase SLT domain GII88_RS12130 PF10145 Phage-related minor tail protein GII88_RS12135 PF01464 Transglycosylase SLT domain GII88_RS12135 PF01551 Peptidase family M23 GII88_RS12135 PF10145 Phage-related minor tail protein GII88_RS12140 PF05709 Phage tail protein GII88_RS12145 PF06605 Prophage endopeptidase tail GII88_RS12155 PF13229 Right handed beta helix region GII88_RS12155 PF04650 YSIRK type signal peptide GII88_RS12155 PF12708 Pectate lyase superfamily protein GII88_RS12160 PF01510 N-acetylmuramoyl-L-alanine amidase GII88_RS12185 PF18801 response regulator aspartate phosphatase H, N terminal GII88_RS12190 PF07690 Major Facilitator Superfamily GII88_RS12225 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GII88_RS12225 PF04740 LXG domain of WXG superfamily GII88_RS12230 PF09346 SMI1 / KNR4 family (SUKH-1) GII88_RS12240 PF07508 Recombinase GII88_RS12240 PF00239 Resolvase, N terminal domain GII88_RS12245 PF12544 Lysine-2,3-aminomutase GII88_RS12250 PF00583 Acetyltransferase (GNAT) family GII88_RS12255 PF07687 Peptidase dimerisation domain GII88_RS12255 PF01546 Peptidase family M20/M25/M40 GII88_RS12260 PF01144 Coenzyme A transferase GII88_RS12265 PF01144 Coenzyme A transferase GII88_RS12270 PF00202 Aminotransferase class-III GII88_RS12285 PF00583 Acetyltransferase (GNAT) family GII88_RS12290 PF01641 SelR domain GII88_RS12295 PF01625 Peptide methionine sulfoxide reductase GII88_RS12300 PF01047 MarR family GII88_RS12310 PF00990 Diguanylate cyclase, GGDEF domain GII88_RS12310 PF07694 5TMR of 5TMR-LYT GII88_RS12315 PF01554 MatE GII88_RS12325 PF17431 Uncharacterized YmpT-like GII88_RS12330 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) GII88_RS12335 PF13472 GDSL-like Lipase/Acylhydrolase family GII88_RS12340 PF02630 SCO1/SenC GII88_RS12345 PF02645 Uncharacterised protein, DegV family COG1307 GII88_RS12350 PF10751 Protein of unknown function (DUF2535) GII88_RS12355 PF00291 Pyridoxal-phosphate dependent enzyme GII88_RS12355 PF00585 C-terminal regulatory domain of Threonine dehydratase GII88_RS12360 PF00158 Sigma-54 interaction domain GII88_RS12360 PF08461 Ribonuclease R winged-helix domain GII88_RS12365 PF03006 Haemolysin-III related GII88_RS12375 PF00186 Dihydrofolate reductase GII88_RS12380 PF04608 Phosphatidylglycerophosphatase A GII88_RS12385 PF14005 YpjP-like protein GII88_RS12390 PF04445 Putative SAM-dependent methyltransferase GII88_RS12395 PF06491 Disulphide isomerase GII88_RS12400 PF00920 Dehydratase family GII88_RS12405 PF13769 Virulence factor GII88_RS12405 PF08712 Scaffold protein Nfu/NifU N terminal GII88_RS12410 PF01966 HD domain GII88_RS12415 PF00255 Glutathione peroxidase GII88_RS12420 PF01268 Formate--tetrahydrofolate ligase GII88_RS12425 PF04204 Homoserine O-succinyltransferase GII88_RS12430 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GII88_RS12430 PF00534 Glycosyl transferases group 1 GII88_RS12440 PF00313 'Cold-shock' DNA-binding domain GII88_RS12450 PF10819 Protein of unknown function (DUF2564) GII88_RS12455 PF10782 Zinc-finger GII88_RS12460 PF13456 Reverse transcriptase-like GII88_RS12465 PF02592 Putative vitamin uptake transporter GII88_RS12470 PF13456 Reverse transcriptase-like GII88_RS12480 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GII88_RS12480 PF01367 5'-3' exonuclease, C-terminal SAM fold GII88_RS12485 PF10752 Protein of unknown function (DUF2533) GII88_RS12490 PF00350 Dynamin family GII88_RS12500 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family GII88_RS12505 PF02797 Chalcone and stilbene synthases, C-terminal domain GII88_RS12505 PF00195 Chalcone and stilbene synthases, N-terminal domain GII88_RS12510 PF00583 Acetyltransferase (GNAT) family GII88_RS12515 PF00860 Permease family GII88_RS12520 PF00156 Phosphoribosyl transferase domain GII88_RS12525 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GII88_RS12530 PF13307 Helicase C-terminal domain GII88_RS12540 PF02926 THUMP domain GII88_RS12540 PF01170 Putative RNA methylase family UPF0020 GII88_RS12550 PF05103 DivIVA protein GII88_RS12555 PF06908 YspA SLOG family GII88_RS12560 PF11122 Inner spore coat protein D GII88_RS12565 PF13482 RNase_H superfamily GII88_RS12570 PF00271 Helicase conserved C-terminal domain GII88_RS12570 PF09369 Domain of unknown function (DUF1998) GII88_RS12570 PF00270 DEAD/DEAH box helicase GII88_RS12575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII88_RS12585 PF14179 YppG-like protein GII88_RS12590 PF14178 YppF-like protein GII88_RS12600 PF08807 Bacterial domain of unknown function (DUF1798) GII88_RS12615 PF10720 Protein of unknown function (DUF2515) GII88_RS12620 PF03838 Recombination protein U GII88_RS12625 PF00912 Transglycosylase GII88_RS12625 PF00905 Penicillin binding protein transpeptidase domain GII88_RS12635 PF00730 HhH-GPD superfamily base excision DNA repair protein GII88_RS12635 PF00633 Helix-hairpin-helix motif GII88_RS12635 PF10576 Iron-sulfur binding domain of endonuclease III GII88_RS12640 PF07261 Replication initiation and membrane attachment GII88_RS12645 PF01336 OB-fold nucleic acid binding domain GII88_RS12645 PF00152 tRNA synthetases class II (D, K and N) GII88_RS12650 PF00155 Aminotransferase class I and II GII88_RS12655 PF17881 Domain of unknown function (DUF5590) GII88_RS12655 PF03413 Peptidase propeptide and YPEB domain GII88_RS12660 PF14084 Protein of unknown function (DUF4264) GII88_RS12665 PF00929 Exonuclease GII88_RS12665 PF04851 Type III restriction enzyme, res subunit GII88_RS12665 PF13307 Helicase C-terminal domain GII88_RS12670 PF02261 Aspartate decarboxylase GII88_RS12675 PF02569 Pantoate-beta-alanine ligase GII88_RS12680 PF02548 Ketopantoate hydroxymethyltransferase GII88_RS12690 PF03099 Biotin/lipoate A/B protein ligase family GII88_RS12690 PF08279 HTH domain GII88_RS12690 PF02237 Biotin protein ligase C terminal domain GII88_RS12695 PF01743 Poly A polymerase head domain GII88_RS12695 PF12627 Probable RNA and SrmB- binding site of polymerase A GII88_RS12695 PF13735 tRNA nucleotidyltransferase domain 2 putative GII88_RS12700 PF13439 Glycosyltransferase Family 4 GII88_RS12700 PF00534 Glycosyl transferases group 1 GII88_RS12705 PF02585 GlcNAc-PI de-N-acetylase GII88_RS12710 PF02142 MGS-like domain GII88_RS12715 PF05173 Dihydrodipicolinate reductase, C-terminus GII88_RS12715 PF01113 Dihydrodipicolinate reductase, N-terminus GII88_RS12720 PF03819 MazG nucleotide pyrophosphohydrolase domain GII88_RS12725 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII88_RS12725 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII88_RS12730 PF09577 Sporulation protein YpjB (SpoYpjB) GII88_RS12735 PF07187 Protein of unknown function (DUF1405) GII88_RS12740 PF00032 Cytochrome b(C-terminal)/b6/petD GII88_RS12740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII88_RS12745 PF00033 Cytochrome b/b6/petB GII88_RS12750 PF00355 Rieske [2Fe-2S] domain GII88_RS12755 PF10673 Protein of unknown function (DUF2487) GII88_RS12760 PF08864 UPF0302 domain GII88_RS12760 PF08858 IDEAL domain GII88_RS12770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII88_RS12775 PF02153 Prephenate dehydrogenase GII88_RS12775 PF01842 ACT domain GII88_RS12780 PF00155 Aminotransferase class I and II GII88_RS12785 PF00290 Tryptophan synthase alpha chain GII88_RS12790 PF00291 Pyridoxal-phosphate dependent enzyme GII88_RS12795 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GII88_RS12800 PF00218 Indole-3-glycerol phosphate synthase GII88_RS12805 PF00591 Glycosyl transferase family, a/b domain GII88_RS12805 PF02885 Glycosyl transferase family, helical bundle domain GII88_RS12810 PF00425 chorismate binding enzyme GII88_RS12810 PF04715 Anthranilate synthase component I, N terminal region GII88_RS12815 PF07736 Chorismate mutase type I GII88_RS12820 PF01761 3-dehydroquinate synthase GII88_RS12825 PF01264 Chorismate synthase GII88_RS12830 PF03705 CheR methyltransferase, all-alpha domain GII88_RS12830 PF01739 CheR methyltransferase, SAM binding domain GII88_RS12835 PF00334 Nucleoside diphosphate kinase GII88_RS12840 PF00348 Polyprenyl synthetase GII88_RS12845 PF01209 ubiE/COQ5 methyltransferase family GII88_RS12850 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 GII88_RS12855 PF02081 Tryptophan RNA-binding attenuator protein GII88_RS12860 PF01227 GTP cyclohydrolase I GII88_RS12865 PF00216 Bacterial DNA-binding protein GII88_RS12870 PF09547 Stage IV sporulation protein A (spore_IV_A) GII88_RS12880 PF10966 Protein of unknown function (DUF2768) GII88_RS12890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GII88_RS12890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GII88_RS12895 PF01926 50S ribosome-binding GTPase GII88_RS12895 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GII88_RS12905 PF14045 YIEGIA protein GII88_RS12915 PF14140 YpzI-like protein GII88_RS12920 PF01070 FMN-dependent dehydrogenase GII88_RS12925 PF00575 S1 RNA binding domain GII88_RS12930 PF02224 Cytidylate kinase GII88_RS12935 PF14620 YpeB sporulation GII88_RS12935 PF03413 Peptidase propeptide and YPEB domain GII88_RS12940 PF07486 Cell Wall Hydrolase GII88_RS12940 PF01471 Putative peptidoglycan binding domain GII88_RS12945 PF13367 PrsW family intramembrane metalloprotease GII88_RS12950 PF00710 Asparaginase, N-terminal GII88_RS12950 PF17763 Glutaminase/Asparaginase C-terminal domain GII88_RS12960 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII88_RS12960 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII88_RS12965 PF05389 Negative regulator of genetic competence (MecA) GII88_RS12970 PF00149 Calcineurin-like phosphoesterase GII88_RS12975 PF10864 Protein of unknown function (DUF2663) GII88_RS12980 PF01476 LysM domain GII88_RS12985 PF02517 CPBP intramembrane metalloprotease GII88_RS12990 PF00271 Helicase conserved C-terminal domain GII88_RS12990 PF00270 DEAD/DEAH box helicase GII88_RS12995 PF14493 Helix-turn-helix domain GII88_RS13005 PF12822 ECF transporter, substrate-specific component GII88_RS13010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII88_RS13010 PF01842 ACT domain GII88_RS13010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII88_RS13015 PF04225 Opacity-associated protein A LysM-like domain GII88_RS13015 PF01551 Peptidase family M23 GII88_RS13025 PF08281 Sigma-70, region 4 GII88_RS13025 PF04542 Sigma-70 region 2 GII88_RS13030 PF03816 Cell envelope-related transcriptional attenuator domain GII88_RS13035 PF01522 Polysaccharide deacetylase GII88_RS13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS13045 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS13050 PF00072 Response regulator receiver domain GII88_RS13050 PF00486 Transcriptional regulatory protein, C terminal GII88_RS13055 PF18698 Histidine kinase sensor domain GII88_RS13055 PF00989 PAS fold GII88_RS13055 PF00672 HAMP domain GII88_RS13055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS13055 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS13060 PF00486 Transcriptional regulatory protein, C terminal GII88_RS13060 PF00072 Response regulator receiver domain GII88_RS13065 PF01578 Cytochrome C assembly protein GII88_RS13070 PF05140 ResB-like family GII88_RS13075 PF00578 AhpC/TSA family GII88_RS13080 PF00849 RNA pseudouridylate synthase GII88_RS13080 PF01479 S4 domain GII88_RS13085 PF07670 Nucleoside recognition GII88_RS13090 PF07670 Nucleoside recognition GII88_RS13095 PF00768 D-alanyl-D-alanine carboxypeptidase GII88_RS13095 PF07943 Penicillin-binding protein 5, C-terminal domain GII88_RS13100 PF13047 Protein of unknown function (DUF3907) GII88_RS13105 PF04079 Segregation and condensation complex subunit ScpB GII88_RS13110 PF02616 Segregation and condensation protein ScpA GII88_RS13120 PF03745 Domain of unknown function (DUF309) GII88_RS13125 PF00583 Acetyltransferase (GNAT) family GII88_RS13130 PF00885 6,7-dimethyl-8-ribityllumazine synthase GII88_RS13135 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GII88_RS13135 PF00925 GTP cyclohydrolase II GII88_RS13140 PF00677 Lumazine binding domain GII88_RS13145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII88_RS13145 PF01872 RibD C-terminal domain GII88_RS13155 PF00149 Calcineurin-like phosphoesterase GII88_RS13160 PF00011 Hsp20/alpha crystallin family GII88_RS13170 PF18801 response regulator aspartate phosphatase H, N terminal GII88_RS13175 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GII88_RS13180 PF06207 Protein of unknown function (DUF1002) GII88_RS13185 PF05908 Poly-gamma-glutamate hydrolase GII88_RS13190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GII88_RS13190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GII88_RS13200 PF03323 Bacillus/Clostridium GerA spore germination protein GII88_RS13205 PF14097 Stage V sporulation protein AE1 GII88_RS13210 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GII88_RS13215 PF07451 Stage V sporulation protein AD (SpoVAD) GII88_RS13220 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GII88_RS13225 PF13782 Stage V sporulation protein AB GII88_RS13230 PF12164 Stage V sporulation protein AA GII88_RS13235 PF04539 Sigma-70 region 3 GII88_RS13235 PF04545 Sigma-70, region 4 GII88_RS13235 PF04542 Sigma-70 region 2 GII88_RS13240 PF13581 Histidine kinase-like ATPase domain GII88_RS13245 PF01740 STAS domain GII88_RS13250 PF00768 D-alanyl-D-alanine carboxypeptidase GII88_RS13250 PF07943 Penicillin-binding protein 5, C-terminal domain GII88_RS13255 PF01048 Phosphorylase superfamily GII88_RS13260 PF01676 Metalloenzyme superfamily GII88_RS13265 PF02899 Phage integrase, N-terminal SAM-like domain GII88_RS13265 PF00589 Phage integrase family GII88_RS13270 PF14004 Protein of unknown function (DUF4227) GII88_RS13275 PF01475 Ferric uptake regulator family GII88_RS13280 PF01944 Stage II sporulation protein M GII88_RS13285 PF02378 Phosphotransferase system, EIIC GII88_RS13290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII88_RS13305 PF13673 Acetyltransferase (GNAT) domain GII88_RS13315 PF00293 NUDIX domain GII88_RS13320 PF13072 Mother cell inhibitor of FtsZ GII88_RS13325 PF00440 Bacterial regulatory proteins, tetR family GII88_RS13330 PF13564 DoxX-like family GII88_RS13335 PF00248 Aldo/keto reductase family GII88_RS13345 PF12146 Serine aminopeptidase, S33 GII88_RS13350 PF10827 Protein of unknown function (DUF2552) GII88_RS13355 PF01521 Iron-sulphur cluster biosynthesis GII88_RS13370 PF03992 Antibiotic biosynthesis monooxygenase GII88_RS13375 PF01674 Lipase (class 2) GII88_RS13385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII88_RS13390 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS13395 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS13400 PF00005 ABC transporter GII88_RS13405 PF00005 ABC transporter GII88_RS13405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS13410 PF01554 MatE GII88_RS13420 PF08863 YolD-like protein GII88_RS13425 PF11798 IMS family HHH motif GII88_RS13425 PF11799 impB/mucB/samB family C-terminal domain GII88_RS13425 PF00817 impB/mucB/samB family GII88_RS13430 PF14164 YqzH-like protein GII88_RS13435 PF07690 Major Facilitator Superfamily GII88_RS13445 PF00485 Phosphoribulokinase / Uridine kinase family GII88_RS13460 PF00005 ABC transporter GII88_RS13480 PF05908 Poly-gamma-glutamate hydrolase GII88_RS13490 PF00106 short chain dehydrogenase GII88_RS13495 PF00753 Metallo-beta-lactamase superfamily GII88_RS13500 PF03807 NADP oxidoreductase coenzyme F420-dependent GII88_RS13500 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII88_RS13505 PF01546 Peptidase family M20/M25/M40 GII88_RS13510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GII88_RS13515 PF12146 Serine aminopeptidase, S33 GII88_RS13520 PF00471 Ribosomal protein L33 GII88_RS13525 PF12706 Beta-lactamase superfamily domain GII88_RS13525 PF00753 Metallo-beta-lactamase superfamily GII88_RS13530 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GII88_RS13530 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GII88_RS13545 PF16868 NMT1-like family GII88_RS13550 PF00392 Bacterial regulatory proteins, gntR family GII88_RS13550 PF07702 UTRA domain GII88_RS13555 PF00232 Glycosyl hydrolase family 1 GII88_RS13560 PF02378 Phosphotransferase system, EIIC GII88_RS13565 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GII88_RS13570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII88_RS13575 PF00245 Alkaline phosphatase GII88_RS13585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII88_RS13585 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII88_RS13590 PF11798 IMS family HHH motif GII88_RS13590 PF11799 impB/mucB/samB family C-terminal domain GII88_RS13590 PF00817 impB/mucB/samB family GII88_RS13600 PF02096 60Kd inner membrane protein GII88_RS13605 PF07687 Peptidase dimerisation domain GII88_RS13605 PF01546 Peptidase family M20/M25/M40 GII88_RS13610 PF01039 Carboxyl transferase domain GII88_RS13620 PF11728 Putative aromatic acid exporter C-terminal domain GII88_RS13620 PF06081 Aromatic acid exporter family member 1 GII88_RS13625 PF00005 ABC transporter GII88_RS13630 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS13635 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII88_RS13640 PF06491 Disulphide isomerase GII88_RS13645 PF00781 Diacylglycerol kinase catalytic domain GII88_RS13650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII88_RS13650 PF00364 Biotin-requiring enzyme GII88_RS13650 PF02817 e3 binding domain GII88_RS13655 PF02779 Transketolase, pyrimidine binding domain GII88_RS13655 PF02780 Transketolase, C-terminal domain GII88_RS13660 PF00676 Dehydrogenase E1 component GII88_RS13665 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS13665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII88_RS13670 PF00871 Acetokinase family GII88_RS13675 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII88_RS13675 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII88_RS13680 PF01515 Phosphate acetyl/butaryl transferase GII88_RS13685 PF00989 PAS fold GII88_RS13685 PF02954 Bacterial regulatory protein, Fis family GII88_RS13685 PF00158 Sigma-54 interaction domain GII88_RS13690 PF11118 Protein of unknown function (DUF2627) GII88_RS13695 PF03009 Glycerophosphoryl diester phosphodiesterase family GII88_RS13700 PF01520 N-acetylmuramoyl-L-alanine amidase GII88_RS13715 PF06426 Serine acetyltransferase, N-terminal GII88_RS13715 PF00132 Bacterial transferase hexapeptide (six repeats) GII88_RS13725 PF00072 Response regulator receiver domain GII88_RS13725 PF08769 Sporulation initiation factor Spo0A C terminal GII88_RS13730 PF05580 SpoIVB peptidase S55 GII88_RS13730 PF17820 PDZ domain GII88_RS13735 PF13476 AAA domain GII88_RS13740 PF01316 Arginine repressor, DNA binding domain GII88_RS13740 PF02863 Arginine repressor, C-terminal domain GII88_RS13745 PF01479 S4 domain GII88_RS13745 PF01728 FtsJ-like methyltransferase GII88_RS13750 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GII88_RS13750 PF02780 Transketolase, C-terminal domain GII88_RS13750 PF02779 Transketolase, pyrimidine binding domain GII88_RS13755 PF00348 Polyprenyl synthetase GII88_RS13760 PF02609 Exonuclease VII small subunit GII88_RS13765 PF02601 Exonuclease VII, large subunit GII88_RS13765 PF13742 OB-fold nucleic acid binding domain GII88_RS13770 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GII88_RS13770 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GII88_RS13775 PF01029 NusB family GII88_RS13780 PF03780 Asp23 family, cell envelope-related function GII88_RS13785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII88_RS13785 PF00289 Biotin carboxylase, N-terminal domain GII88_RS13785 PF02785 Biotin carboxylase C-terminal domain GII88_RS13790 PF00364 Biotin-requiring enzyme GII88_RS13795 PF12685 SpoIIIAH-like protein GII88_RS13805 PF09581 Stage III sporulation protein AF (Spore_III_AF) GII88_RS13810 PF09546 Stage III sporulation protein AE (spore_III_AE) GII88_RS13815 PF06686 Stage III sporulation protein AC/AD protein family GII88_RS13820 PF06686 Stage III sporulation protein AC/AD protein family GII88_RS13825 PF09548 Stage III sporulation protein AB (spore_III_AB) GII88_RS13835 PF10942 Protein of unknown function (DUF2619) GII88_RS13840 PF09285 Elongation factor P, C-terminal GII88_RS13840 PF01132 Elongation factor P (EF-P) OB domain GII88_RS13840 PF08207 Elongation factor P (EF-P) KOW-like domain GII88_RS13845 PF00557 Metallopeptidase family M24 GII88_RS13845 PF01321 Creatinase/Prolidase N-terminal domain GII88_RS13850 PF01220 Dehydroquinase class II GII88_RS13855 PF11085 Conserved membrane protein YqhR GII88_RS13860 PF07136 Protein of unknown function (DUF1385) GII88_RS13870 PF01734 Patatin-like phospholipase GII88_RS13875 PF01325 Iron dependent repressor, N-terminal DNA binding domain GII88_RS13875 PF02742 Iron dependent repressor, metal binding and dimerisation domain GII88_RS13880 PF03099 Biotin/lipoate A/B protein ligase family GII88_RS13885 PF00581 Rhodanese-like domain GII88_RS13890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII88_RS13895 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS13900 PF00005 ABC transporter GII88_RS13900 PF00571 CBS domain GII88_RS13905 PF02347 Glycine cleavage system P-protein GII88_RS13910 PF02347 Glycine cleavage system P-protein GII88_RS13915 PF01571 Aminomethyltransferase folate-binding domain GII88_RS13915 PF08669 Glycine cleavage T-protein C-terminal barrel domain GII88_RS13920 PF00271 Helicase conserved C-terminal domain GII88_RS13920 PF00176 SNF2 family N-terminal domain GII88_RS13925 PF11079 Bacterial protein YqhG of unknown function GII88_RS13930 PF08671 Anti-repressor SinI GII88_RS13935 PF01381 Helix-turn-helix GII88_RS13935 PF08671 Anti-repressor SinI GII88_RS13940 PF12389 Camelysin metallo-endopeptidase GII88_RS13955 PF13028 Protein of unknown function (DUF3889) GII88_RS13960 PF14038 YqzE-like protein GII88_RS13970 PF15980 Putative Competence protein ComGF GII88_RS13980 PF07963 Prokaryotic N-terminal methylation motif GII88_RS13985 PF07963 Prokaryotic N-terminal methylation motif GII88_RS13990 PF00482 Type II secretion system (T2SS), protein F GII88_RS13995 PF00437 Type II/IV secretion system protein GII88_RS14000 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GII88_RS14000 PF01740 STAS domain GII88_RS14010 PF03960 ArsC family GII88_RS14015 PF11117 Protein of unknown function (DUF2626) GII88_RS14020 PF00753 Metallo-beta-lactamase superfamily GII88_RS14025 PF10958 Protein of unknown function (DUF2759) GII88_RS14030 PF01910 Thiamine-binding protein GII88_RS14040 PF00246 Zinc carboxypeptidase GII88_RS14045 PF01497 Periplasmic binding protein GII88_RS14050 PF00884 Sulfatase GII88_RS14055 PF00480 ROK family GII88_RS14060 PF06014 Bacterial protein of unknown function (DUF910) GII88_RS14065 PF03323 Bacillus/Clostridium GerA spore germination protein GII88_RS14070 PF01694 Rhomboid family GII88_RS14075 PF01812 5-formyltetrahydrofolate cyclo-ligase family GII88_RS14080 PF00471 Ribosomal protein L33 GII88_RS14085 PF00534 Glycosyl transferases group 1 GII88_RS14085 PF13439 Glycosyltransferase Family 4 GII88_RS14105 PF00005 ABC transporter GII88_RS14110 PF00005 ABC transporter GII88_RS14115 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS14120 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS14125 PF12849 PBP superfamily domain GII88_RS14130 PF00905 Penicillin binding protein transpeptidase domain GII88_RS14130 PF03717 Penicillin-binding Protein dimerisation domain GII88_RS14135 PF07690 Major Facilitator Superfamily GII88_RS14140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GII88_RS14140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GII88_RS14145 PF04306 Protein of unknown function (DUF456) GII88_RS14150 PF06691 Protein of unknown function (DUF1189) GII88_RS14160 PF04551 GcpE protein GII88_RS14175 PF01475 Ferric uptake regulator family GII88_RS14180 PF00950 ABC 3 transport family GII88_RS14185 PF00005 ABC transporter GII88_RS14190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII88_RS14190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII88_RS14195 PF11116 Protein of unknown function (DUF2624) GII88_RS14200 PF01261 Xylose isomerase-like TIM barrel GII88_RS14205 PF00270 DEAD/DEAH box helicase GII88_RS14205 PF00271 Helicase conserved C-terminal domain GII88_RS14215 PF02401 LytB protein GII88_RS14220 PF01784 NIF3 (NGG1p interacting factor 3) GII88_RS14225 PF04816 tRNA (adenine(22)-N(1))-methyltransferase GII88_RS14230 PF04493 Endonuclease V GII88_RS14235 PF04493 Endonuclease V GII88_RS14275 PF14431 YwqJ-like deaminase GII88_RS14275 PF04740 LXG domain of WXG superfamily GII88_RS14275 PF14449 Pre-toxin TG GII88_RS14290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII88_RS14295 PF04545 Sigma-70, region 4 GII88_RS14295 PF04539 Sigma-70 region 3 GII88_RS14295 PF04542 Sigma-70 region 2 GII88_RS14295 PF00140 Sigma-70 factor, region 1.2 GII88_RS14295 PF03979 Sigma-70 factor, region 1.1 GII88_RS14300 PF08275 DNA primase catalytic core, N-terminal domain GII88_RS14300 PF10410 DnaB-helicase binding domain of primase GII88_RS14300 PF01807 CHC2 zinc finger GII88_RS14305 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GII88_RS14310 PF03618 Kinase/pyrophosphorylase GII88_RS14315 PF08279 HTH domain GII88_RS14315 PF00571 CBS domain GII88_RS14320 PF02092 Glycyl-tRNA synthetase beta subunit GII88_RS14325 PF02091 Glycyl-tRNA synthetase alpha subunit GII88_RS14330 PF11967 Recombination protein O N terminal GII88_RS14330 PF02565 Recombination protein O C terminal GII88_RS14335 PF14006 YqzL-like protein GII88_RS14340 PF07650 KH domain GII88_RS14340 PF01926 50S ribosome-binding GTPase GII88_RS14345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII88_RS14350 PF01219 Prokaryotic diacylglycerol kinase GII88_RS14355 PF02130 Uncharacterized protein family UPF0054 GII88_RS14360 PF07698 7TM receptor with intracellular HD hydrolase GII88_RS14360 PF01966 HD domain GII88_RS14360 PF07697 7TM-HD extracellular GII88_RS14365 PF02562 PhoH-like protein GII88_RS14370 PF06898 Putative stage IV sporulation protein YqfD GII88_RS14375 PF07873 YabP family GII88_RS14385 PF12127 SigmaW regulon antibacterial GII88_RS14390 PF01972 Serine dehydrogenase proteinase GII88_RS14390 PF01957 NfeD-like C-terminal, partner-binding GII88_RS14395 PF09424 Yqey-like protein GII88_RS14400 PF01165 Ribosomal protein S21 GII88_RS14405 PF02690 Na+/Pi-cotransporter GII88_RS14410 PF01791 DeoC/LacD family aldolase GII88_RS14415 PF04055 Radical SAM superfamily GII88_RS14415 PF01938 TRAM domain GII88_RS14415 PF00919 Uncharacterized protein family UPF0004 GII88_RS14420 PF04452 RNA methyltransferase GII88_RS14430 PF00226 DnaJ domain GII88_RS14430 PF01556 DnaJ C terminal domain GII88_RS14430 PF00684 DnaJ central domain GII88_RS14435 PF00012 Hsp70 protein GII88_RS14440 PF01025 GrpE GII88_RS14445 PF01628 HrcA protein C terminal domain GII88_RS14450 PF06969 HemN C-terminal domain GII88_RS14450 PF04055 Radical SAM superfamily GII88_RS14455 PF06421 GTP-binding protein LepA C-terminus GII88_RS14455 PF00009 Elongation factor Tu GTP binding domain GII88_RS14455 PF00679 Elongation factor G C-terminus GII88_RS14455 PF03144 Elongation factor Tu domain 2 GII88_RS14460 PF12438 Protein of unknown function (DUF3679) GII88_RS14465 PF07454 Stage II sporulation protein P (SpoIIP) GII88_RS14470 PF03418 Germination protease GII88_RS14475 PF01649 Ribosomal protein S20 GII88_RS14480 PF06144 DNA polymerase III, delta subunit GII88_RS14485 PF14141 YqzM-like protein GII88_RS14490 PF03772 Competence protein GII88_RS14490 PF13567 Domain of unknown function (DUF4131) GII88_RS14490 PF00753 Metallo-beta-lactamase superfamily GII88_RS14495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII88_RS14500 PF10531 SLBB domain GII88_RS14505 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII88_RS14505 PF03807 NADP oxidoreductase coenzyme F420-dependent GII88_RS14510 PF13649 Methyltransferase domain GII88_RS14520 PF01966 HD domain GII88_RS14525 PF01467 Cytidylyltransferase-like GII88_RS14530 PF01985 CRS1 / YhbY (CRM) domain GII88_RS14535 PF08501 Shikimate dehydrogenase substrate binding domain GII88_RS14535 PF01488 Shikimate / quinate 5-dehydrogenase GII88_RS14535 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GII88_RS14540 PF01926 50S ribosome-binding GTPase GII88_RS14550 PF08970 Sporulation inhibitor A GII88_RS14555 PF00657 GDSL-like Lipase/Acylhydrolase GII88_RS14560 PF12746 GNAT acetyltransferase GII88_RS14565 PF10057 Uncharacterized conserved protein (DUF2294) GII88_RS14570 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GII88_RS14570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII88_RS14570 PF00384 Molybdopterin oxidoreductase GII88_RS14570 PF01568 Molydopterin dinucleotide binding domain GII88_RS14570 PF00037 4Fe-4S binding domain GII88_RS14575 PF07849 Protein of unknown function (DUF1641) GII88_RS14585 PF04542 Sigma-70 region 2 GII88_RS14585 PF04545 Sigma-70, region 4 GII88_RS14605 PF07454 Stage II sporulation protein P (SpoIIP) GII88_RS14620 PF04545 Sigma-70, region 4 GII88_RS14620 PF04542 Sigma-70 region 2 GII88_RS14650 PF00005 ABC transporter GII88_RS14655 PF02687 FtsX-like permease family GII88_RS14660 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS14660 PF00672 HAMP domain GII88_RS14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS14665 PF00486 Transcriptional regulatory protein, C terminal GII88_RS14665 PF00072 Response regulator receiver domain GII88_RS14675 PF11122 Inner spore coat protein D GII88_RS14700 PF17094 Uncharacterised protein family (UPF0715) GII88_RS14730 PF00753 Metallo-beta-lactamase superfamily GII88_RS14730 PF16123 Hydroxyacylglutathione hydrolase C-terminus GII88_RS14740 PF00196 Bacterial regulatory proteins, luxR family GII88_RS14740 PF00072 Response regulator receiver domain GII88_RS14745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS14745 PF07730 Histidine kinase GII88_RS14750 PF00085 Thioredoxin GII88_RS14755 PF01925 Sulfite exporter TauE/SafE GII88_RS14760 PF01206 Sulfurtransferase TusA GII88_RS14765 PF00581 Rhodanese-like domain GII88_RS14765 PF00753 Metallo-beta-lactamase superfamily GII88_RS14770 PF01206 Sulfurtransferase TusA GII88_RS14770 PF00581 Rhodanese-like domain GII88_RS14775 PF13686 DsrE/DsrF/DrsH-like family GII88_RS14780 PF02583 Metal-sensitive transcriptional repressor GII88_RS14825 PF01809 Putative membrane protein insertion efficiency factor GII88_RS14830 PF00490 Delta-aminolevulinic acid dehydratase GII88_RS14835 PF01380 SIS domain GII88_RS14840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GII88_RS14845 PF01638 HxlR-like helix-turn-helix GII88_RS14850 PF00487 Fatty acid desaturase GII88_RS14855 PF07730 Histidine kinase GII88_RS14860 PF00072 Response regulator receiver domain GII88_RS14860 PF00196 Bacterial regulatory proteins, luxR family GII88_RS14865 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS14870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII88_RS14875 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS14880 PF12911 N-terminal TM domain of oligopeptide transport permease C GII88_RS14880 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS14885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS14885 PF00005 ABC transporter GII88_RS14890 PF00005 ABC transporter GII88_RS14890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII88_RS14905 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GII88_RS14905 PF12833 Helix-turn-helix domain GII88_RS14910 PF00106 short chain dehydrogenase GII88_RS14925 PF00067 Cytochrome P450 GII88_RS14930 PF01925 Sulfite exporter TauE/SafE GII88_RS14945 PF00106 short chain dehydrogenase GII88_RS14950 PF08244 Glycosyl hydrolases family 32 C terminal GII88_RS14950 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII88_RS14955 PF03613 PTS system mannose/fructose/sorbose family IID component GII88_RS14960 PF03609 PTS system sorbose-specific iic component GII88_RS14965 PF03830 PTS system sorbose subfamily IIB component GII88_RS14970 PF03610 PTS system fructose IIA component GII88_RS14975 PF00874 PRD domain GII88_RS14975 PF00158 Sigma-54 interaction domain GII88_RS14975 PF03610 PTS system fructose IIA component GII88_RS14985 PF14145 YrhK-like protein GII88_RS15000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GII88_RS15000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GII88_RS15005 PF00248 Aldo/keto reductase family GII88_RS15010 PF07690 Major Facilitator Superfamily GII88_RS15015 PF01638 HxlR-like helix-turn-helix GII88_RS15020 PF03575 Peptidase family S51 GII88_RS15025 PF02602 Uroporphyrinogen-III synthase HemD GII88_RS15035 PF01497 Periplasmic binding protein GII88_RS15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS15040 PF03466 LysR substrate binding domain GII88_RS15045 PF07690 Major Facilitator Superfamily GII88_RS15055 PF00667 FAD binding domain GII88_RS15055 PF00258 Flavodoxin GII88_RS15055 PF00175 Oxidoreductase NAD-binding domain GII88_RS15055 PF00067 Cytochrome P450 GII88_RS15060 PF16295 Tetracyclin repressor-like, C-terminal domain GII88_RS15060 PF00440 Bacterial regulatory proteins, tetR family GII88_RS15065 PF17936 Bacterial Ig domain GII88_RS15065 PF00082 Subtilase family GII88_RS15070 PF08241 Methyltransferase domain GII88_RS15085 PF09501 Probable sporulation protein (Bac_small_yrzI) GII88_RS15090 PF14143 YrhC-like protein GII88_RS15095 PF01053 Cys/Met metabolism PLP-dependent enzyme GII88_RS15100 PF00291 Pyridoxal-phosphate dependent enzyme GII88_RS15105 PF01048 Phosphorylase superfamily GII88_RS15110 PF13649 Methyltransferase domain GII88_RS15115 PF10750 Protein of unknown function (DUF2536) GII88_RS15120 PF07423 Domain of unknown function (DUF1510) GII88_RS15125 PF00905 Penicillin binding protein transpeptidase domain GII88_RS15125 PF03717 Penicillin-binding Protein dimerisation domain GII88_RS15130 PF01272 Transcription elongation factor, GreA/GreB, C-term GII88_RS15130 PF03449 Transcription elongation factor, N-terminal GII88_RS15135 PF00485 Phosphoribulokinase / Uridine kinase family GII88_RS15140 PF16325 Peptidase family U32 C-terminal domain GII88_RS15140 PF01136 Peptidase family U32 GII88_RS15145 PF01136 Peptidase family U32 GII88_RS15150 PF01596 O-methyltransferase GII88_RS15155 PF02618 YceG-like family GII88_RS15160 PF06949 Protein of unknown function (DUF1292) GII88_RS15165 PF03652 Holliday junction resolvase GII88_RS15170 PF06135 IreB regulatory phosphoprotein GII88_RS15175 PF02272 DHHA1 domain GII88_RS15175 PF01411 tRNA synthetases class II (A) GII88_RS15175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII88_RS15180 PF01594 AI-2E family transporter GII88_RS15185 PF13056 Protein of unknown function (DUF3918) GII88_RS15195 PF05239 PRC-barrel domain GII88_RS15200 PF14490 Helix-hairpin-helix containing domain GII88_RS15200 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GII88_RS15200 PF13538 UvrD-like helicase C-terminal domain GII88_RS15205 PF07719 Tetratricopeptide repeat GII88_RS15205 PF13181 Tetratricopeptide repeat GII88_RS15215 PF00266 Aminotransferase class-V GII88_RS15220 PF02082 Transcriptional regulator GII88_RS15225 PF05496 Holliday junction DNA helicase RuvB P-loop domain GII88_RS15225 PF12002 MgsA AAA+ ATPase C terminal GII88_RS15225 PF16193 AAA C-terminal domain GII88_RS15230 PF00899 ThiF family GII88_RS15240 PF00152 tRNA synthetases class II (D, K and N) GII88_RS15240 PF01336 OB-fold nucleic acid binding domain GII88_RS15240 PF02938 GAD domain GII88_RS15245 PF13393 Histidyl-tRNA synthetase GII88_RS15245 PF03129 Anticodon binding domain GII88_RS15250 PF08239 Bacterial SH3 domain GII88_RS15250 PF01520 N-acetylmuramoyl-L-alanine amidase GII88_RS15255 PF02580 D-Tyr-tRNA(Tyr) deacylase GII88_RS15260 PF02824 TGS domain GII88_RS15260 PF04607 Region found in RelA / SpoT proteins GII88_RS15260 PF13291 ACT domain GII88_RS15265 PF00156 Phosphoribosyl transferase domain GII88_RS15270 PF17768 RecJ OB domain GII88_RS15270 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GII88_RS15270 PF02272 DHHA1 domain GII88_RS15270 PF01368 DHH family GII88_RS15275 PF06305 Lipopolysaccharide assembly protein A domain GII88_RS15280 PF07549 SecD/SecF GG Motif GII88_RS15280 PF02355 Protein export membrane protein GII88_RS15285 PF13797 Post-transcriptional regulator GII88_RS15290 PF14667 Polysaccharide biosynthesis C-terminal domain GII88_RS15290 PF01943 Polysaccharide biosynthesis protein GII88_RS15295 PF04239 Protein of unknown function (DUF421) GII88_RS15300 PF12670 Protein of unknown function (DUF3792) GII88_RS15305 PF02699 Preprotein translocase subunit GII88_RS15310 PF01702 Queuine tRNA-ribosyltransferase GII88_RS15315 PF02547 Queuosine biosynthesis protein GII88_RS15320 PF11146 Protein of unknown function (DUF2905) GII88_RS15325 PF17864 RuvB AAA lid domain GII88_RS15325 PF05491 RuvB C-terminal winged helix domain GII88_RS15325 PF05496 Holliday junction DNA helicase RuvB P-loop domain GII88_RS15330 PF01330 RuvA N terminal domain GII88_RS15330 PF07499 RuvA, C-terminal domain GII88_RS15335 PF08955 BofC C-terminal domain GII88_RS15335 PF08977 Bypass of Forespore C, N terminal GII88_RS15345 PF08141 Small acid-soluble spore protein H family GII88_RS15350 PF05163 DinB family GII88_RS15355 PF05908 Poly-gamma-glutamate hydrolase GII88_RS15370 PF01709 Transcriptional regulator GII88_RS15375 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII88_RS15380 PF01476 LysM domain GII88_RS15385 PF02445 Quinolinate synthetase A protein GII88_RS15390 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GII88_RS15390 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GII88_RS15395 PF02910 Fumarate reductase flavoprotein C-term GII88_RS15395 PF00890 FAD binding domain GII88_RS15400 PF00266 Aminotransferase class-V GII88_RS15405 PF02829 3H domain GII88_RS15405 PF08279 HTH domain GII88_RS15410 PF01842 ACT domain GII88_RS15410 PF00800 Prephenate dehydratase GII88_RS15415 PF01842 ACT domain GII88_RS15420 PF01926 50S ribosome-binding GTPase GII88_RS15420 PF09269 Domain of unknown function (DUF1967) GII88_RS15420 PF01018 GTP1/OBG GII88_RS15425 PF14682 Sporulation initiation phospho-transferase B, C-terminal GII88_RS15425 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII88_RS15430 PF01016 Ribosomal L27 protein GII88_RS15435 PF04327 Cysteine protease Prp GII88_RS15440 PF00829 Ribosomal prokaryotic L21 protein GII88_RS15445 PF02163 Peptidase family M50 GII88_RS15450 PF01551 Peptidase family M23 GII88_RS15455 PF08327 Activator of Hsp90 ATPase homolog 1-like protein GII88_RS15460 PF01022 Bacterial regulatory protein, arsR family GII88_RS15465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GII88_RS15470 PF03775 Septum formation inhibitor MinC, C-terminal domain GII88_RS15475 PF04093 rod shape-determining protein MreD GII88_RS15480 PF04085 rod shape-determining protein MreC GII88_RS15490 PF04002 RadC-like JAB domain GII88_RS15495 PF02545 Maf-like protein GII88_RS15500 PF05036 Sporulation related domain GII88_RS15505 PF06750 Bacterial Peptidase A24 N-terminal domain GII88_RS15505 PF01478 Type IV leader peptidase family GII88_RS15510 PF02875 Mur ligase family, glutamate ligase domain GII88_RS15510 PF08245 Mur ligase middle domain GII88_RS15515 PF08264 Anticodon-binding domain of tRNA GII88_RS15515 PF00133 tRNA synthetases class I (I, L, M and V) GII88_RS15515 PF10458 Valyl tRNA synthetase tRNA binding arm GII88_RS15530 PF01476 LysM domain GII88_RS15535 PF00202 Aminotransferase class-III GII88_RS15540 PF00490 Delta-aminolevulinic acid dehydratase GII88_RS15545 PF02602 Uroporphyrinogen-III synthase HemD GII88_RS15550 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GII88_RS15550 PF03900 Porphobilinogen deaminase, C-terminal domain GII88_RS15555 PF01578 Cytochrome C assembly protein GII88_RS15560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GII88_RS15560 PF01488 Shikimate / quinate 5-dehydrogenase GII88_RS15560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GII88_RS15570 PF01926 50S ribosome-binding GTPase GII88_RS15575 PF00004 ATPase family associated with various cellular activities (AAA) GII88_RS15575 PF02190 ATP-dependent protease La (LON) substrate-binding domain GII88_RS15575 PF05362 Lon protease (S16) C-terminal proteolytic domain GII88_RS15580 PF05362 Lon protease (S16) C-terminal proteolytic domain GII88_RS15580 PF00004 ATPase family associated with various cellular activities (AAA) GII88_RS15585 PF07724 AAA domain (Cdc48 subfamily) GII88_RS15585 PF06689 ClpX C4-type zinc finger GII88_RS15585 PF10431 C-terminal, D2-small domain, of ClpB protein GII88_RS15590 PF05698 Bacterial trigger factor protein (TF) C-terminus GII88_RS15590 PF05697 Bacterial trigger factor protein (TF) GII88_RS15590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GII88_RS15600 PF00694 Aconitase C-terminal domain GII88_RS15605 PF00330 Aconitase family (aconitate hydratase) GII88_RS15610 PF00180 Isocitrate/isopropylmalate dehydrogenase GII88_RS15615 PF00682 HMGL-like GII88_RS15615 PF08502 LeuA allosteric (dimerisation) domain GII88_RS15620 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GII88_RS15620 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GII88_RS15625 PF01842 ACT domain GII88_RS15625 PF10369 Small subunit of acetolactate synthase GII88_RS15630 PF00205 Thiamine pyrophosphate enzyme, central domain GII88_RS15630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII88_RS15630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII88_RS15635 PF01063 Amino-transferase class IV GII88_RS15645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII88_RS15645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII88_RS15665 PF04860 Phage portal protein GII88_RS15695 PF00145 C-5 cytosine-specific DNA methylase GII88_RS15695 PF01381 Helix-turn-helix GII88_RS15710 PF04634 Protein of unknown function, DUF600 GII88_RS15715 PF04740 LXG domain of WXG superfamily GII88_RS15720 PF18801 response regulator aspartate phosphatase H, N terminal GII88_RS15740 PF12850 Calcineurin-like phosphoesterase superfamily domain GII88_RS15745 PF01725 Ham1 family GII88_RS15750 PF03725 3' exoribonuclease family, domain 2 GII88_RS15750 PF01138 3' exoribonuclease family, domain 1 GII88_RS15755 PF10646 Sporulation and spore germination GII88_RS15760 PF01177 Asp/Glu/Hydantoin racemase GII88_RS15765 PF01047 MarR family GII88_RS15770 PF00196 Bacterial regulatory proteins, luxR family GII88_RS15775 PF00106 short chain dehydrogenase GII88_RS15780 PF03061 Thioesterase superfamily GII88_RS15785 PF13183 4Fe-4S dicluster domain GII88_RS15785 PF13085 2Fe-2S iron-sulfur cluster binding domain GII88_RS15790 PF00890 FAD binding domain GII88_RS15790 PF02910 Fumarate reductase flavoprotein C-term GII88_RS15795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GII88_RS15800 PF10702 Protein of unknown function (DUF2507) GII88_RS15805 PF13840 ACT domain GII88_RS15805 PF01842 ACT domain GII88_RS15805 PF00696 Amino acid kinase family GII88_RS15810 PF02151 UvrB/uvrC motif GII88_RS15810 PF01541 GIY-YIG catalytic domain GII88_RS15810 PF08459 UvrC Helix-hairpin-helix N-terminal GII88_RS15815 PF00085 Thioredoxin GII88_RS15820 PF00766 Electron transfer flavoprotein FAD-binding domain GII88_RS15820 PF01012 Electron transfer flavoprotein domain GII88_RS15825 PF01012 Electron transfer flavoprotein domain GII88_RS15830 PF00378 Enoyl-CoA hydratase/isomerase GII88_RS15835 PF08359 YsiA-like protein, C-terminal region GII88_RS15835 PF00440 Bacterial regulatory proteins, tetR family GII88_RS15840 PF00501 AMP-binding enzyme GII88_RS15840 PF13193 AMP-binding enzyme C-terminal domain GII88_RS15845 PF03994 Domain of Unknown Function (DUF350) GII88_RS15850 PF00488 MutS domain V GII88_RS15850 PF01713 Smr domain GII88_RS15855 PF14716 Helix-hairpin-helix domain GII88_RS15855 PF02811 PHP domain GII88_RS15855 PF14791 DNA polymerase beta thumb GII88_RS15860 PF02674 Colicin V production protein GII88_RS15865 PF05164 Cell division protein ZapA GII88_RS15870 PF01351 Ribonuclease HII GII88_RS15870 PF11858 Domain of unknown function (DUF3378) GII88_RS15895 PF12399 Branched-chain amino acid ATP-binding cassette transporter GII88_RS15895 PF00005 ABC transporter GII88_RS15910 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GII88_RS15910 PF01588 Putative tRNA binding domain GII88_RS15910 PF03147 Ferredoxin-fold anticodon binding domain GII88_RS15910 PF03484 tRNA synthetase B5 domain GII88_RS15910 PF03483 B3/4 domain GII88_RS15915 PF01409 tRNA synthetases class II core domain (F) GII88_RS15915 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GII88_RS15920 PF08032 RNA 2'-O ribose methyltransferase substrate binding GII88_RS15920 PF00588 SpoU rRNA Methylase family GII88_RS15925 PF14098 Small, acid-soluble spore protein I GII88_RS15930 PF13722 5TM C-terminal transporter carbon starvation CstA GII88_RS15930 PF02554 Carbon starvation protein CstA GII88_RS15940 PF06964 Alpha-L-arabinofuranosidase C-terminal domain GII88_RS15945 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS15950 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS15955 PF01547 Bacterial extracellular solute-binding protein GII88_RS15960 PF13685 Iron-containing alcohol dehydrogenase GII88_RS15965 PF00596 Class II Aldolase and Adducin N-terminal domain GII88_RS15970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII88_RS15970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII88_RS15975 PF02610 L-arabinose isomerase GII88_RS15975 PF11762 L-arabinose isomerase C-terminal domain GII88_RS15980 PF04616 Glycosyl hydrolases family 43 GII88_RS15985 PF05343 M42 glutamyl aminopeptidase GII88_RS15995 PF06961 Protein of unknown function (DUF1294) GII88_RS16000 PF00453 Ribosomal protein L20 GII88_RS16005 PF01632 Ribosomal protein L35 GII88_RS16010 PF00707 Translation initiation factor IF-3, C-terminal domain GII88_RS16010 PF05198 Translation initiation factor IF-3, N-terminal domain GII88_RS16015 PF04172 LrgB-like family GII88_RS16020 PF03788 LrgA family GII88_RS16025 PF16655 PhoD-like phosphatase, N-terminal domain GII88_RS16025 PF09423 PhoD-like phosphatase GII88_RS16030 PF04397 LytTr DNA-binding domain GII88_RS16030 PF00072 Response regulator receiver domain GII88_RS16035 PF06580 Histidine kinase GII88_RS16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS16035 PF07694 5TMR of 5TMR-LYT GII88_RS16045 PF13419 Haloacid dehalogenase-like hydrolase GII88_RS16050 PF02824 TGS domain GII88_RS16050 PF03129 Anticodon binding domain GII88_RS16050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII88_RS16050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII88_RS16055 PF08812 YtxC-like family GII88_RS16060 PF09335 SNARE associated Golgi protein GII88_RS16065 PF01695 IstB-like ATP binding protein GII88_RS16065 PF07319 Primosomal protein DnaI N-terminus GII88_RS16070 PF07261 Replication initiation and membrane attachment GII88_RS16075 PF03477 ATP cone domain GII88_RS16090 PF02675 S-adenosylmethionine decarboxylase GII88_RS16095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GII88_RS16095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GII88_RS16110 PF01121 Dephospho-CoA kinase GII88_RS16115 PF02659 Putative manganese efflux pump GII88_RS16120 PF06827 Zinc finger found in FPG and IleRS GII88_RS16120 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GII88_RS16120 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GII88_RS16125 PF00476 DNA polymerase family A GII88_RS16125 PF01367 5'-3' exonuclease, C-terminal SAM fold GII88_RS16125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GII88_RS16130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS16130 PF16736 Single Cache-like GII88_RS16130 PF00989 PAS fold GII88_RS16130 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS16135 PF00486 Transcriptional regulatory protein, C terminal GII88_RS16135 PF00072 Response regulator receiver domain GII88_RS16140 PF00056 lactate/malate dehydrogenase, NAD binding domain GII88_RS16140 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GII88_RS16145 PF00180 Isocitrate/isopropylmalate dehydrogenase GII88_RS16150 PF00285 Citrate synthase, C-terminal domain GII88_RS16155 PF04284 Protein of unknown function (DUF441) GII88_RS16160 PF01594 AI-2E family transporter GII88_RS16165 PF04186 FxsA cytoplasmic membrane protein GII88_RS16170 PF00391 PEP-utilising enzyme, mobile domain GII88_RS16170 PF00224 Pyruvate kinase, barrel domain GII88_RS16170 PF02887 Pyruvate kinase, alpha/beta domain GII88_RS16175 PF00365 Phosphofructokinase GII88_RS16180 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GII88_RS16185 PF01039 Carboxyl transferase domain GII88_RS16185 PF17848 Acetyl-coA carboxylase zinc finger domain GII88_RS16190 PF03949 Malic enzyme, NAD binding domain GII88_RS16190 PF00390 Malic enzyme, N-terminal domain GII88_RS16195 PF01336 OB-fold nucleic acid binding domain GII88_RS16195 PF02811 PHP domain GII88_RS16195 PF14579 Helix-hairpin-helix motif GII88_RS16195 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII88_RS16195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII88_RS16200 PF14034 Sporulation protein YtrH GII88_RS16215 PF02272 DHHA1 domain GII88_RS16215 PF01368 DHH family GII88_RS16220 PF14007 YtpI-like protein GII88_RS16225 PF00392 Bacterial regulatory proteins, gntR family GII88_RS16225 PF07085 DRTGG domain GII88_RS16225 PF03061 Thioesterase superfamily GII88_RS16225 PF00571 CBS domain GII88_RS16230 PF03551 Transcriptional regulator PadR-like family GII88_RS16230 PF10400 Virulence activator alpha C-term GII88_RS16245 PF14698 Argininosuccinate lyase C-terminal GII88_RS16245 PF00206 Lyase GII88_RS16250 PF00764 Arginosuccinate synthase GII88_RS16255 PF00994 Probable molybdopterin binding domain GII88_RS16260 PF00871 Acetokinase family GII88_RS16265 PF02384 N-6 DNA Methylase GII88_RS16270 PF08534 Redoxin GII88_RS16275 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GII88_RS16280 PF11167 Protein of unknown function (DUF2953) GII88_RS16285 PF06271 RDD family GII88_RS16290 PF01343 Peptidase family S49 GII88_RS16295 PF01513 ATP-NAD kinase GII88_RS16305 PF07690 Major Facilitator Superfamily GII88_RS16315 PF00501 AMP-binding enzyme GII88_RS16315 PF13193 AMP-binding enzyme C-terminal domain GII88_RS16320 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII88_RS16325 PF02926 THUMP domain GII88_RS16325 PF02568 Thiamine biosynthesis protein (ThiI) GII88_RS16330 PF00266 Aminotransferase class-V GII88_RS16335 PF05525 Branched-chain amino acid transport protein GII88_RS16345 PF06160 Septation ring formation regulator, EzrA GII88_RS16350 PF02811 PHP domain GII88_RS16355 PF00440 Bacterial regulatory proteins, tetR family GII88_RS16360 PF13185 GAF domain GII88_RS16365 PF00990 Diguanylate cyclase, GGDEF domain GII88_RS16370 PF00163 Ribosomal protein S4/S9 N-terminal domain GII88_RS16370 PF01479 S4 domain GII88_RS16385 PF05656 Protein of unknown function (DUF805) GII88_RS16390 PF12706 Beta-lactamase superfamily domain GII88_RS16395 PF01037 Lrp/AsnC ligand binding domain GII88_RS16400 PF01479 S4 domain GII88_RS16400 PF00579 tRNA synthetases class I (W and Y) GII88_RS16405 PF00501 AMP-binding enzyme GII88_RS16405 PF13193 AMP-binding enzyme C-terminal domain GII88_RS16410 PF00583 Acetyltransferase (GNAT) family GII88_RS16415 PF00571 CBS domain GII88_RS16420 PF00850 Histone deacetylase domain GII88_RS16425 PF13677 Membrane MotB of proton-channel complex MotA/MotB GII88_RS16425 PF00691 OmpA family GII88_RS16430 PF01618 MotA/TolQ/ExbB proton channel family GII88_RS16435 PF00356 Bacterial regulatory proteins, lacI family GII88_RS16440 PF01817 Chorismate mutase type II GII88_RS16440 PF00793 DAHP synthetase I family GII88_RS16450 PF11009 Protein of unknown function (DUF2847) GII88_RS16455 PF12732 YtxH-like protein GII88_RS16460 PF06103 Bacterial protein of unknown function (DUF948) GII88_RS16465 PF01225 Mur ligase family, catalytic domain GII88_RS16465 PF02875 Mur ligase family, glutamate ligase domain GII88_RS16465 PF08245 Mur ligase middle domain GII88_RS16470 PF09397 Ftsk gamma domain GII88_RS16470 PF01580 FtsK/SpoIIIE family GII88_RS16470 PF17854 FtsK alpha domain GII88_RS16475 PF01588 Putative tRNA binding domain GII88_RS16475 PF14794 Domain of unknown function (DUF4479) GII88_RS16480 PF07285 Protein of unknown function (DUF1444) GII88_RS16485 PF00085 Thioredoxin GII88_RS16490 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ GII88_RS16495 PF05343 M42 glutamyl aminopeptidase GII88_RS16500 PF03413 Peptidase propeptide and YPEB domain GII88_RS16510 PF00390 Malic enzyme, N-terminal domain GII88_RS16510 PF03949 Malic enzyme, NAD binding domain GII88_RS16515 PF00753 Metallo-beta-lactamase superfamily GII88_RS16520 PF02390 Putative methyltransferase GII88_RS16525 PF14165 YtzH-like protein GII88_RS16530 PF01636 Phosphotransferase enzyme family GII88_RS16535 PF00128 Alpha amylase, catalytic domain GII88_RS16535 PF17999 Pullulanase N1-terminal domain GII88_RS16535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GII88_RS16540 PF00781 Diacylglycerol kinase catalytic domain GII88_RS16555 PF00291 Pyridoxal-phosphate dependent enzyme GII88_RS16565 PF10903 Protein of unknown function (DUF2691) GII88_RS16570 PF01546 Peptidase family M20/M25/M40 GII88_RS16575 PF00860 Permease family GII88_RS16580 PF08220 DeoR-like helix-turn-helix domain GII88_RS16585 PF01479 S4 domain GII88_RS16585 PF00849 RNA pseudouridylate synthase GII88_RS16590 PF14667 Polysaccharide biosynthesis C-terminal domain GII88_RS16590 PF01943 Polysaccharide biosynthesis protein GII88_RS16600 PF02028 BCCT, betaine/carnitine/choline family transporter GII88_RS16605 PF10957 Sporulation protein Cse60 GII88_RS16610 PF00581 Rhodanese-like domain GII88_RS16625 PF04854 Protein of unknown function, DUF624 GII88_RS16630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII88_RS16630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII88_RS16640 PF07470 Glycosyl Hydrolase Family 88 GII88_RS16645 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS16650 PF17853 GGDEF-like domain GII88_RS16650 PF12833 Helix-turn-helix domain GII88_RS16655 PF13416 Bacterial extracellular solute-binding protein GII88_RS16660 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS16665 PF01370 NAD dependent epimerase/dehydratase family GII88_RS16670 PF01738 Dienelactone hydrolase family GII88_RS16680 PF03466 LysR substrate binding domain GII88_RS16680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS16685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII88_RS16690 PF00133 tRNA synthetases class I (I, L, M and V) GII88_RS16690 PF09334 tRNA synthetases class I (M) GII88_RS16690 PF13603 Leucyl-tRNA synthetase, Domain 2 GII88_RS16690 PF08264 Anticodon-binding domain of tRNA GII88_RS16695 PF14074 Protein of unknown function (DUF4257) GII88_RS16700 PF07690 Major Facilitator Superfamily GII88_RS16705 PF03180 NLPA lipoprotein GII88_RS16710 PF04791 LMBR1-like membrane protein GII88_RS16715 PF02687 FtsX-like permease family GII88_RS16715 PF12704 MacB-like periplasmic core domain GII88_RS16720 PF00005 ABC transporter GII88_RS16730 PF00005 ABC transporter GII88_RS16735 PF00392 Bacterial regulatory proteins, gntR family GII88_RS16740 PF10732 Protein of unknown function (DUF2524) GII88_RS16745 PF16199 Radical_SAM C-terminal domain GII88_RS16745 PF04055 Radical SAM superfamily GII88_RS16750 PF06962 Putative rRNA methylase GII88_RS16755 PF00375 Sodium:dicarboxylate symporter family GII88_RS16760 PF10776 Protein of unknown function (DUF2600) GII88_RS16765 PF12146 Serine aminopeptidase, S33 GII88_RS16770 PF00132 Bacterial transferase hexapeptide (six repeats) GII88_RS16775 PF01569 PAP2 superfamily GII88_RS16780 PF13439 Glycosyltransferase Family 4 GII88_RS16780 PF00534 Glycosyl transferases group 1 GII88_RS16785 PF13537 Glutamine amidotransferase domain GII88_RS16785 PF00733 Asparagine synthase GII88_RS16790 PF02772 S-adenosylmethionine synthetase, central domain GII88_RS16790 PF02773 S-adenosylmethionine synthetase, C-terminal domain GII88_RS16790 PF00438 S-adenosylmethionine synthetase, N-terminal domain GII88_RS16795 PF01293 Phosphoenolpyruvate carboxykinase GII88_RS16805 PF10763 Protein of unknown function (DUF2584) GII88_RS16810 PF00326 Prolyl oligopeptidase family GII88_RS16820 PF00005 ABC transporter GII88_RS16825 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS16830 PF00293 NUDIX domain GII88_RS16840 PF05105 Bacteriophage holin family GII88_RS16845 PF00210 Ferritin-like domain GII88_RS16855 PF13115 YtkA-like GII88_RS16860 PF02664 S-Ribosylhomocysteinase (LuxS) GII88_RS16865 PF01809 Putative membrane protein insertion efficiency factor GII88_RS16870 PF00484 Carbonic anhydrase GII88_RS16875 PF02492 CobW/HypB/UreG, nucleotide-binding domain GII88_RS16875 PF07683 Cobalamin synthesis protein cobW C-terminal domain GII88_RS16880 PF01297 Zinc-uptake complex component A periplasmic GII88_RS16885 PF01197 Ribosomal protein L31 GII88_RS16890 PF01654 Cytochrome bd terminal oxidase subunit I GII88_RS16895 PF02322 Cytochrome bd terminal oxidase subunit II GII88_RS16900 PF07561 Domain of Unknown Function (DUF1540) GII88_RS16910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII88_RS16910 PF13378 Enolase C-terminal domain-like GII88_RS16915 PF00501 AMP-binding enzyme GII88_RS16915 PF13193 AMP-binding enzyme C-terminal domain GII88_RS16920 PF00378 Enoyl-CoA hydratase/isomerase GII88_RS16925 PF00561 alpha/beta hydrolase fold GII88_RS16930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII88_RS16930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII88_RS16930 PF16582 Middle domain of thiamine pyrophosphate GII88_RS16935 PF00425 chorismate binding enzyme GII88_RS16940 PF01040 UbiA prenyltransferase family GII88_RS16945 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII88_RS16960 PF00483 Nucleotidyl transferase GII88_RS16965 PF00483 Nucleotidyl transferase GII88_RS16970 PF00128 Alpha amylase, catalytic domain GII88_RS16970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GII88_RS16970 PF02806 Alpha amylase, C-terminal all-beta domain GII88_RS17090 PF00392 Bacterial regulatory proteins, gntR family GII88_RS17095 PF09515 Thiamine transporter protein (Thia_YuaJ) GII88_RS17100 PF04203 Sortase domain GII88_RS17115 PF18801 response regulator aspartate phosphatase H, N terminal GII88_RS17120 PF01470 Pyroglutamyl peptidase GII88_RS17125 PF02080 TrkA-C domain GII88_RS17125 PF02254 TrkA-N domain GII88_RS17130 PF02386 Cation transport protein GII88_RS17140 PF12867 DinB superfamily GII88_RS17150 PF00465 Iron-containing alcohol dehydrogenase GII88_RS17155 PF00171 Aldehyde dehydrogenase family GII88_RS17170 PF04072 Leucine carboxyl methyltransferase GII88_RS17175 PF00842 Alanine racemase, C-terminal domain GII88_RS17175 PF01168 Alanine racemase, N-terminal domain GII88_RS17180 PF00190 Cupin GII88_RS17220 PF03747 ADP-ribosylglycohydrolase GII88_RS17255 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) GII88_RS17265 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GII88_RS17275 PF00149 Calcineurin-like phosphoesterase GII88_RS17280 PF02673 Bacitracin resistance protein BacA GII88_RS17285 PF01594 AI-2E family transporter GII88_RS17290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII88_RS17290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII88_RS17295 PF01965 DJ-1/PfpI family GII88_RS17300 PF00672 HAMP domain GII88_RS17300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII88_RS17300 PF02743 Cache domain GII88_RS17305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII88_RS17305 PF02743 Cache domain GII88_RS17305 PF00672 HAMP domain GII88_RS17310 PF02743 Cache domain GII88_RS17310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII88_RS17310 PF00672 HAMP domain GII88_RS17320 PF03060 Nitronate monooxygenase GII88_RS17325 PF01894 Uncharacterised protein family UPF0047 GII88_RS17330 PF16657 Maltogenic Amylase, C-terminal domain GII88_RS17330 PF00128 Alpha amylase, catalytic domain GII88_RS17345 PF01670 Glycosyl hydrolase family 12 GII88_RS17350 PF01595 Cyclin M transmembrane N-terminal domain GII88_RS17350 PF03471 Transporter associated domain GII88_RS17350 PF00571 CBS domain GII88_RS17355 PF04298 Putative neutral zinc metallopeptidase GII88_RS17365 PF11458 Membrane-integrating protein Mistic GII88_RS17370 PF02254 TrkA-N domain GII88_RS17370 PF07885 Ion channel GII88_RS17375 PF08868 YugN-like family GII88_RS17380 PF04239 Protein of unknown function (DUF421) GII88_RS17385 PF03073 TspO/MBR family GII88_RS17390 PF13302 Acetyltransferase (GNAT) domain GII88_RS17395 PF00342 Phosphoglucose isomerase GII88_RS17400 PF00465 Iron-containing alcohol dehydrogenase GII88_RS17405 PF04070 Domain of unknown function (DUF378) GII88_RS17410 PF00575 S1 RNA binding domain GII88_RS17415 PF00155 Aminotransferase class I and II GII88_RS17420 PF01037 Lrp/AsnC ligand binding domain GII88_RS17425 PF00561 alpha/beta hydrolase fold GII88_RS17425 PF08386 TAP-like protein GII88_RS17430 PF08958 Domain of unknown function (DUF1871) GII88_RS17440 PF00155 Aminotransferase class I and II GII88_RS17450 PF08810 Kinase associated protein B GII88_RS17455 PF00929 Exonuclease GII88_RS17460 PF07690 Major Facilitator Superfamily GII88_RS17465 PF00912 Transglycosylase GII88_RS17465 PF00905 Penicillin binding protein transpeptidase domain GII88_RS17470 PF04134 Protein of unknown function, DUF393 GII88_RS17475 PF17328 Family of unknown function (DUF5366) GII88_RS17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS17480 PF00989 PAS fold GII88_RS17480 PF17203 Single cache domain 3 GII88_RS17480 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII88_RS17485 PF00072 Response regulator receiver domain GII88_RS17495 PF01066 CDP-alcohol phosphatidyltransferase GII88_RS17500 PF09335 SNARE associated Golgi protein GII88_RS17505 PF02666 Phosphatidylserine decarboxylase GII88_RS17510 PF03390 2-hydroxycarboxylate transporter family GII88_RS17520 PF00361 Proton-conducting membrane transporter GII88_RS17520 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GII88_RS17520 PF13244 Domain of unknown function (DUF4040) GII88_RS17525 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GII88_RS17530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GII88_RS17535 PF00361 Proton-conducting membrane transporter GII88_RS17540 PF01899 Na+/H+ ion antiporter subunit GII88_RS17545 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GII88_RS17550 PF03334 Na+/H+ antiporter subunit GII88_RS17555 PF03061 Thioesterase superfamily GII88_RS17560 PF00196 Bacterial regulatory proteins, luxR family GII88_RS17560 PF00072 Response regulator receiver domain GII88_RS17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS17565 PF07730 Histidine kinase GII88_RS17570 PF05952 Bacillus competence pheromone ComX GII88_RS17580 PF08181 DegQ (SacQ) family GII88_RS17595 PF00563 EAL domain GII88_RS17595 PF08668 HDOD domain GII88_RS17600 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GII88_RS17600 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GII88_RS17600 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain GII88_RS17605 PF00857 Isochorismatase family GII88_RS17610 PF07997 Protein of unknown function (DUF1694) GII88_RS17615 PF14166 YueH-like protein GII88_RS17625 PF01594 AI-2E family transporter GII88_RS17630 PF02082 Transcriptional regulator GII88_RS17635 PF07859 alpha/beta hydrolase fold GII88_RS17645 PF01966 HD domain GII88_RS17650 PF00106 short chain dehydrogenase GII88_RS17655 PF17355 Family of unknown function (DUF5383) GII88_RS17665 PF12538 DNA transporter GII88_RS17665 PF01580 FtsK/SpoIIIE family GII88_RS17670 PF10140 WXG100 protein secretion system (Wss), protein YukC GII88_RS17675 PF08817 WXG100 protein secretion system (Wss), protein YukD GII88_RS17680 PF06013 Proteins of 100 residues with WXG GII88_RS17685 PF01235 Sodium:alanine symporter family GII88_RS17690 PF13556 PucR C-terminal helix-turn-helix domain GII88_RS17690 PF17853 GGDEF-like domain GII88_RS17690 PF06018 CodY GAF-like domain GII88_RS17695 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GII88_RS17695 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GII88_RS17705 PF00174 Oxidoreductase molybdopterin binding domain GII88_RS17710 PF02632 BioY family GII88_RS17715 PF13726 Na+-H+ antiporter family GII88_RS17715 PF03553 Na+/H+ antiporter family GII88_RS17720 PF00883 Cytosol aminopeptidase family, catalytic domain GII88_RS17720 PF02789 Cytosol aminopeptidase family, N-terminal domain GII88_RS17725 PF02681 Divergent PAP2 family GII88_RS17730 PF06725 3D domain GII88_RS17735 PF14068 Putative membrane protein GII88_RS17740 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS17745 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS17755 PF14169 Cold-inducible protein YdjO GII88_RS17760 PF00583 Acetyltransferase (GNAT) family GII88_RS17765 PF01521 Iron-sulphur cluster biosynthesis GII88_RS17770 PF01678 Diaminopimelate epimerase GII88_RS17775 PF01773 Na+ dependent nucleoside transporter N-terminus GII88_RS17775 PF07662 Na+ dependent nucleoside transporter C-terminus GII88_RS17780 PF07293 Protein of unknown function (DUF1450) GII88_RS17785 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS17790 PF08818 Domain of unknown function (DU1801) GII88_RS17800 PF18801 response regulator aspartate phosphatase H, N terminal GII88_RS17805 PF05870 Phenolic acid decarboxylase (PAD) GII88_RS17815 PF07315 Protein of unknown function (DUF1462) GII88_RS17820 PF01106 NifU-like domain GII88_RS17825 PF07676 WD40-like Beta Propeller Repeat GII88_RS17825 PF00326 Prolyl oligopeptidase family GII88_RS17830 PF00288 GHMP kinases N terminal domain GII88_RS17830 PF08544 GHMP kinases C terminal GII88_RS17835 PF00291 Pyridoxal-phosphate dependent enzyme GII88_RS17840 PF03447 Homoserine dehydrogenase, NAD binding domain GII88_RS17840 PF01842 ACT domain GII88_RS17840 PF00742 Homoserine dehydrogenase GII88_RS17845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII88_RS17845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII88_RS17855 PF04608 Phosphatidylglycerophosphatase A GII88_RS17860 PF13344 Haloacid dehalogenase-like hydrolase GII88_RS17865 PF01934 Protein of unknown function DUF86 GII88_RS17870 PF06265 Protein of unknown function (DUF1027) GII88_RS17875 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII88_RS17880 PF04055 Radical SAM superfamily GII88_RS17880 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GII88_RS17885 PF01551 Peptidase family M23 GII88_RS17895 PF00209 Sodium:neurotransmitter symporter family GII88_RS17900 PF09560 Sporulation protein YunB (Spo_YunB) GII88_RS17905 PF08827 Domain of unknown function (DUF1805) GII88_RS17910 PF02872 5'-nucleotidase, C-terminal domain GII88_RS17915 PF01925 Sulfite exporter TauE/SafE GII88_RS17920 PF01904 Protein of unknown function DUF72 GII88_RS17930 PF13977 BetI-type transcriptional repressor, C-terminal GII88_RS17930 PF00440 Bacterial regulatory proteins, tetR family GII88_RS17940 PF00266 Aminotransferase class-V GII88_RS17945 PF01546 Peptidase family M20/M25/M40 GII88_RS17950 PF17853 GGDEF-like domain GII88_RS17950 PF07905 Purine catabolism regulatory protein-like family GII88_RS17950 PF13556 PucR C-terminal helix-turn-helix domain GII88_RS17955 PF07690 Major Facilitator Superfamily GII88_RS17960 PF03606 C4-dicarboxylate anaerobic carrier GII88_RS17965 PF00591 Glycosyl transferase family, a/b domain GII88_RS17965 PF02885 Glycosyl transferase family, helical bundle domain GII88_RS17970 PF00591 Glycosyl transferase family, a/b domain GII88_RS17970 PF02885 Glycosyl transferase family, helical bundle domain GII88_RS17975 PF04231 Endonuclease I GII88_RS17985 PF01266 FAD dependent oxidoreductase GII88_RS18000 PF18801 response regulator aspartate phosphatase H, N terminal GII88_RS18005 PF01458 Uncharacterized protein family (UPF0051) GII88_RS18010 PF01592 NifU-like N terminal domain GII88_RS18015 PF00266 Aminotransferase class-V GII88_RS18020 PF01458 Uncharacterized protein family (UPF0051) GII88_RS18025 PF00005 ABC transporter GII88_RS18030 PF01545 Cation efflux family GII88_RS18030 PF16916 Dimerisation domain of Zinc Transporter GII88_RS18035 PF02627 Carboxymuconolactone decarboxylase family GII88_RS18040 PF03180 NLPA lipoprotein GII88_RS18045 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS18050 PF09383 NIL domain GII88_RS18050 PF00005 ABC transporter GII88_RS18055 PF02036 SCP-2 sterol transfer family GII88_RS18060 PF00085 Thioredoxin GII88_RS18065 PF01751 Toprim domain GII88_RS18070 PF10830 Protein of unknown function (DUF2553) GII88_RS18075 PF01597 Glycine cleavage H-protein GII88_RS18080 PF03960 ArsC family GII88_RS18085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII88_RS18085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII88_RS18085 PF02770 Acyl-CoA dehydrogenase, middle domain GII88_RS18090 PF00108 Thiolase, N-terminal domain GII88_RS18090 PF02803 Thiolase, C-terminal domain GII88_RS18095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GII88_RS18095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GII88_RS18095 PF00378 Enoyl-CoA hydratase/isomerase GII88_RS18100 PF14115 YuzL-like protein GII88_RS18110 PF07875 Coat F domain GII88_RS18115 PF10835 Protein of unknown function (DUF2573) GII88_RS18125 PF00005 ABC transporter GII88_RS18130 PF01032 FecCD transport family GII88_RS18135 PF01032 FecCD transport family GII88_RS18140 PF01497 Periplasmic binding protein GII88_RS18145 PF14039 YusW-like protein GII88_RS18155 PF00768 D-alanyl-D-alanine carboxypeptidase GII88_RS18155 PF07943 Penicillin-binding protein 5, C-terminal domain GII88_RS18160 PF00106 short chain dehydrogenase GII88_RS18165 PF00210 Ferritin-like domain GII88_RS18170 PF13180 PDZ domain GII88_RS18175 PF00486 Transcriptional regulatory protein, C terminal GII88_RS18175 PF00072 Response regulator receiver domain GII88_RS18180 PF00672 HAMP domain GII88_RS18180 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS18180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS18185 PF00440 Bacterial regulatory proteins, tetR family GII88_RS18190 PF00206 Lyase GII88_RS18190 PF10415 Fumarase C C-terminus GII88_RS18195 PF13113 Protein of unknown function (DUF3970) GII88_RS18200 PF03323 Bacillus/Clostridium GerA spore germination protein GII88_RS18205 PF03845 Spore germination protein GII88_RS18210 PF05504 Spore germination B3/ GerAC like, C-terminal GII88_RS18220 PF00196 Bacterial regulatory proteins, luxR family GII88_RS18220 PF00072 Response regulator receiver domain GII88_RS18225 PF07730 Histidine kinase GII88_RS18225 PF00672 HAMP domain GII88_RS18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS18230 PF09922 Cell wall-active antibiotics response 4TMS YvqF GII88_RS18240 PF04012 PspA/IM30 family GII88_RS18250 PF01095 Pectinesterase GII88_RS18255 PF01923 Cobalamin adenosyltransferase GII88_RS18275 PF00701 Dihydrodipicolinate synthetase family GII88_RS18280 PF00005 ABC transporter GII88_RS18285 PF01032 FecCD transport family GII88_RS18290 PF01497 Periplasmic binding protein GII88_RS18295 PF07729 FCD domain GII88_RS18295 PF00392 Bacterial regulatory proteins, gntR family GII88_RS18300 PF00106 short chain dehydrogenase GII88_RS18305 PF03473 MOSC domain GII88_RS18305 PF03475 3-alpha domain GII88_RS18310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS18310 PF03466 LysR substrate binding domain GII88_RS18315 PF00295 Glycosyl hydrolases family 28 GII88_RS18320 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GII88_RS18320 PF08666 SAF domain GII88_RS18325 PF08125 Mannitol dehydrogenase C-terminal domain GII88_RS18325 PF01232 Mannitol dehydrogenase Rossmann domain GII88_RS18330 PF00356 Bacterial regulatory proteins, lacI family GII88_RS18340 PF02614 Glucuronate isomerase GII88_RS18345 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS18345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS18350 PF00072 Response regulator receiver domain GII88_RS18350 PF00486 Transcriptional regulatory protein, C terminal GII88_RS18355 PF00005 ABC transporter GII88_RS18360 PF01032 FecCD transport family GII88_RS18365 PF01032 FecCD transport family GII88_RS18370 PF13520 Amino acid permease GII88_RS18375 PF09575 Small spore protein J (Spore_SspJ) GII88_RS18380 PF04307 LexA-binding, inner membrane-associated putative hydrolase GII88_RS18385 PF00884 Sulfatase GII88_RS18390 PF07690 Major Facilitator Superfamily GII88_RS18395 PF00248 Aldo/keto reductase family GII88_RS18400 PF00480 ROK family GII88_RS18405 PF00266 Aminotransferase class-V GII88_RS18415 PF13538 UvrD-like helicase C-terminal domain GII88_RS18420 PF03458 UPF0126 domain GII88_RS18425 PF13673 Acetyltransferase (GNAT) domain GII88_RS18425 PF04229 GrpB protein GII88_RS18430 PF00583 Acetyltransferase (GNAT) family GII88_RS18430 PF13673 Acetyltransferase (GNAT) domain GII88_RS18435 PF02600 Disulfide bond formation protein DsbB GII88_RS18440 PF13462 Thioredoxin GII88_RS18445 PF00403 Heavy-metal-associated domain GII88_RS18450 PF13416 Bacterial extracellular solute-binding protein GII88_RS18455 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS18460 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS18465 PF01055 Glycosyl hydrolases family 31 GII88_RS18465 PF13802 Galactose mutarotase-like GII88_RS18470 PF14310 Fibronectin type III-like domain GII88_RS18470 PF00933 Glycosyl hydrolase family 3 N terminal domain GII88_RS18470 PF01915 Glycosyl hydrolase family 3 C-terminal domain GII88_RS18475 PF00005 ABC transporter GII88_RS18480 PF00950 ABC 3 transport family GII88_RS18485 PF01297 Zinc-uptake complex component A periplasmic GII88_RS18495 PF01418 Helix-turn-helix domain, rpiR family GII88_RS18495 PF01380 SIS domain GII88_RS18500 PF00294 pfkB family carbohydrate kinase GII88_RS18500 PF01467 Cytidylyltransferase-like GII88_RS18505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII88_RS18505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII88_RS18515 PF01116 Fructose-bisphosphate aldolase class-II GII88_RS18520 PF00403 Heavy-metal-associated domain GII88_RS18525 PF00403 Heavy-metal-associated domain GII88_RS18530 PF02583 Metal-sensitive transcriptional repressor GII88_RS18535 PF01965 DJ-1/PfpI family GII88_RS18540 PF08220 DeoR-like helix-turn-helix domain GII88_RS18540 PF00455 DeoR C terminal sensor domain GII88_RS18545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII88_RS18545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII88_RS18550 PF01261 Xylose isomerase-like TIM barrel GII88_RS18560 PF00596 Class II Aldolase and Adducin N-terminal domain GII88_RS18565 PF07690 Major Facilitator Superfamily GII88_RS18570 PF07690 Major Facilitator Superfamily GII88_RS18575 PF16715 Cyclodipeptide synthase GII88_RS18580 PF00067 Cytochrome P450 GII88_RS18590 PF01047 MarR family GII88_RS18595 PF01425 Amidase GII88_RS18600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII88_RS18600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII88_RS18605 PF02525 Flavodoxin-like fold GII88_RS18610 PF17773 UPF0176 acylphosphatase like domain GII88_RS18610 PF00581 Rhodanese-like domain GII88_RS18610 PF12368 Rhodanase C-terminal GII88_RS18620 PF04545 Sigma-70, region 4 GII88_RS18625 PF12841 YvrJ protein family GII88_RS18630 PF00190 Cupin GII88_RS18635 PF14184 Regulatory protein YrvL GII88_RS18660 PF14449 Pre-toxin TG GII88_RS18660 PF04740 LXG domain of WXG superfamily GII88_RS18675 PF04239 Protein of unknown function (DUF421) GII88_RS18680 PF02915 Rubrerythrin GII88_RS18685 PF07883 Cupin domain GII88_RS18690 PF01183 Glycosyl hydrolases family 25 GII88_RS18690 PF08239 Bacterial SH3 domain GII88_RS18695 PF04688 SPP1 phage holin GII88_RS18700 PF10779 Haemolysin XhlA GII88_RS18725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GII88_RS18725 PF13457 GW (Gly-Tryp) dipeptide domain GII88_RS18735 PF01464 Transglycosylase SLT domain GII88_RS18780 PF00574 Clp protease GII88_RS18795 PF03354 Phage Terminase GII88_RS18825 PF11122 Inner spore coat protein D GII88_RS18850 PF00476 DNA polymerase family A GII88_RS18850 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GII88_RS18850 PF01367 5'-3' exonuclease, C-terminal SAM fold GII88_RS18930 PF01668 SmpB protein GII88_RS18935 PF00575 S1 RNA binding domain GII88_RS18935 PF00773 RNB domain GII88_RS18935 PF08206 Ribonuclease B OB domain GII88_RS18935 PF17876 Cold shock domain GII88_RS18940 PF12146 Serine aminopeptidase, S33 GII88_RS18945 PF03840 Preprotein translocase SecG subunit GII88_RS18950 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII88_RS18950 PF18277 AbrB C-terminal domain GII88_RS18955 PF01381 Helix-turn-helix GII88_RS18970 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS18975 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII88_RS18980 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS18985 PF00571 CBS domain GII88_RS18985 PF00005 ABC transporter GII88_RS18990 PF12802 MarR family GII88_RS18995 PF01914 MarC family integral membrane protein GII88_RS19005 PF13240 zinc-ribbon domain GII88_RS19015 PF01497 Periplasmic binding protein GII88_RS19025 PF01965 DJ-1/PfpI family GII88_RS19030 PF00113 Enolase, C-terminal TIM barrel domain GII88_RS19030 PF03952 Enolase, N-terminal domain GII88_RS19035 PF01676 Metalloenzyme superfamily GII88_RS19035 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GII88_RS19040 PF00121 Triosephosphate isomerase GII88_RS19045 PF00162 Phosphoglycerate kinase GII88_RS19050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GII88_RS19050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GII88_RS19055 PF04198 Putative sugar-binding domain GII88_RS19060 PF00296 Luciferase-like monooxygenase GII88_RS19065 PF00324 Amino acid permease GII88_RS19075 PF00005 ABC transporter GII88_RS19085 PF02589 LUD domain GII88_RS19090 PF02589 LUD domain GII88_RS19090 PF11870 Domain of unknown function (DUF3390) GII88_RS19090 PF13183 4Fe-4S dicluster domain GII88_RS19095 PF02754 Cysteine-rich domain GII88_RS19100 PF07729 FCD domain GII88_RS19100 PF00392 Bacterial regulatory proteins, gntR family GII88_RS19105 PF02652 L-lactate permease GII88_RS19110 PF00309 Sigma-54 factor, Activator interacting domain (AID) GII88_RS19110 PF04963 Sigma-54 factor, core binding domain GII88_RS19110 PF04552 Sigma-54, DNA binding domain GII88_RS19115 PF09628 YvfG protein GII88_RS19120 PF04230 Polysaccharide pyruvyl transferase GII88_RS19125 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII88_RS19130 PF00132 Bacterial transferase hexapeptide (six repeats) GII88_RS19130 PF17836 PglD N-terminal domain GII88_RS19135 PF02397 Bacterial sugar transferase GII88_RS19140 PF14667 Polysaccharide biosynthesis C-terminal domain GII88_RS19140 PF01943 Polysaccharide biosynthesis protein GII88_RS19145 PF00535 Glycosyl transferase family 2 GII88_RS19150 PF04230 Polysaccharide pyruvyl transferase GII88_RS19155 PF00535 Glycosyl transferase family 2 GII88_RS19165 PF00534 Glycosyl transferases group 1 GII88_RS19165 PF13439 Glycosyltransferase Family 4 GII88_RS19170 PF00535 Glycosyl transferase family 2 GII88_RS19175 PF00534 Glycosyl transferases group 1 GII88_RS19175 PF13439 Glycosyltransferase Family 4 GII88_RS19180 PF02719 Polysaccharide biosynthesis protein GII88_RS19185 PF13614 AAA domain GII88_RS19190 PF02706 Chain length determinant protein GII88_RS19195 PF01381 Helix-turn-helix GII88_RS19195 PF08671 Anti-repressor SinI GII88_RS19200 PF02525 Flavodoxin-like fold GII88_RS19205 PF07690 Major Facilitator Superfamily GII88_RS19210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII88_RS19210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII88_RS19210 PF01842 ACT domain GII88_RS19215 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GII88_RS19220 PF17042 Nucleotide-binding C-terminal domain GII88_RS19220 PF07005 Sugar-binding N-terminal domain GII88_RS19225 PF00465 Iron-containing alcohol dehydrogenase GII88_RS19230 PF00701 Dihydrodipicolinate synthetase family GII88_RS19235 PF00158 Sigma-54 interaction domain GII88_RS19235 PF13426 PAS domain GII88_RS19235 PF02954 Bacterial regulatory protein, Fis family GII88_RS19240 PF01638 HxlR-like helix-turn-helix GII88_RS19245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GII88_RS19250 PF02435 Levansucrase/Invertase GII88_RS19255 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII88_RS19255 PF08244 Glycosyl hydrolases family 32 C terminal GII88_RS19270 PF00574 Clp protease GII88_RS19275 PF03641 Possible lysine decarboxylase GII88_RS19280 PF03819 MazG nucleotide pyrophosphohydrolase domain GII88_RS19285 PF01966 HD domain GII88_RS19290 PF01740 STAS domain GII88_RS19290 PF00916 Sulfate permease family GII88_RS19295 PF00484 Carbonic anhydrase GII88_RS19300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII88_RS19300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII88_RS19315 PF00545 ribonuclease GII88_RS19320 PF01337 Barstar (barnase inhibitor) GII88_RS19325 PF00797 N-acetyltransferase GII88_RS19330 PF00381 PTS HPr component phosphorylation site GII88_RS19335 PF10298 WhiA N-terminal LAGLIDADG-like domain GII88_RS19335 PF02650 WhiA C-terminal HTH domain GII88_RS19335 PF14527 WhiA LAGLIDADG-like domain GII88_RS19340 PF01933 Uncharacterised protein family UPF0052 GII88_RS19345 PF03668 P-loop ATPase protein family GII88_RS19350 PF00293 NUDIX domain GII88_RS19360 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS19375 PF01502 Phosphoribosyl-AMP cyclohydrolase GII88_RS19375 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GII88_RS19380 PF00977 Histidine biosynthesis protein GII88_RS19385 PF00977 Histidine biosynthesis protein GII88_RS19390 PF00117 Glutamine amidotransferase class-I GII88_RS19395 PF00475 Imidazoleglycerol-phosphate dehydratase GII88_RS19400 PF00815 Histidinol dehydrogenase GII88_RS19405 PF01634 ATP phosphoribosyltransferase GII88_RS19410 PF13393 Histidyl-tRNA synthetase GII88_RS19415 PF13529 Peptidase_C39 like family GII88_RS19420 PF03211 Pectate lyase GII88_RS19425 PF14602 Hexapeptide repeat of succinyl-transferase GII88_RS19430 PF13419 Haloacid dehalogenase-like hydrolase GII88_RS19435 PF07670 Nucleoside recognition GII88_RS19440 PF01790 Prolipoprotein diacylglyceryl transferase GII88_RS19445 PF02603 HPr Serine kinase N terminus GII88_RS19445 PF07475 HPr Serine kinase C-terminal domain GII88_RS19450 PF01047 MarR family GII88_RS19455 PF07690 Major Facilitator Superfamily GII88_RS19460 PF00149 Calcineurin-like phosphoesterase GII88_RS19465 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GII88_RS19470 PF04024 PspC domain GII88_RS19475 PF13349 Putative adhesin GII88_RS19490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII88_RS19500 PF17760 UvrA interaction domain GII88_RS19500 PF17755 UvrA DNA-binding domain GII88_RS19500 PF00005 ABC transporter GII88_RS19505 PF17757 UvrB interaction domain GII88_RS19505 PF02151 UvrB/uvrC motif GII88_RS19505 PF04851 Type III restriction enzyme, res subunit GII88_RS19505 PF00271 Helicase conserved C-terminal domain GII88_RS19505 PF12344 Ultra-violet resistance protein B GII88_RS19510 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) GII88_RS19520 PF17820 PDZ domain GII88_RS19525 PF17423 Swarming motility protein GII88_RS19530 PF01471 Putative peptidoglycan binding domain GII88_RS19530 PF03572 Peptidase family S41 GII88_RS19530 PF17820 PDZ domain GII88_RS19535 PF00180 Isocitrate/isopropylmalate dehydrogenase GII88_RS19540 PF00877 NlpC/P60 family GII88_RS19545 PF18075 FtsX extracellular domain GII88_RS19545 PF02687 FtsX-like permease family GII88_RS19550 PF00005 ABC transporter GII88_RS19555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII88_RS19560 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII88_RS19560 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII88_RS19570 PF07516 SecA Wing and Scaffold domain GII88_RS19570 PF01043 SecA preprotein cross-linking domain GII88_RS19570 PF07517 SecA DEAD-like domain GII88_RS19570 PF02810 SEC-C motif GII88_RS19575 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GII88_RS19575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GII88_RS19590 PF02561 Flagellar protein FliS GII88_RS19595 PF07195 Flagellar hook-associated protein 2 C-terminus GII88_RS19595 PF07196 Flagellin hook IN motif GII88_RS19595 PF02465 Flagellar hook-associated protein 2 N-terminus GII88_RS19600 PF03646 FlaG protein GII88_RS19605 PF00669 Bacterial flagellin N-terminal helical region GII88_RS19605 PF00700 Bacterial flagellin C-terminal helical region GII88_RS19610 PF02599 Global regulator protein family GII88_RS19615 PF02623 FliW protein GII88_RS19625 PF00669 Bacterial flagellin N-terminal helical region GII88_RS19625 PF00700 Bacterial flagellin C-terminal helical region GII88_RS19630 PF00460 Flagella basal body rod protein GII88_RS19630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII88_RS19635 PF05130 FlgN protein GII88_RS19640 PF04316 Anti-sigma-28 factor, FlgM GII88_RS19655 PF10719 Late competence development protein ComFB GII88_RS19660 PF04851 Type III restriction enzyme, res subunit GII88_RS19660 PF00271 Helicase conserved C-terminal domain GII88_RS19665 PF02645 Uncharacterised protein, DegV family COG1307 GII88_RS19670 PF00072 Response regulator receiver domain GII88_RS19670 PF00196 Bacterial regulatory proteins, luxR family GII88_RS19675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS19675 PF05384 Sensor protein DegS GII88_RS19675 PF07730 Histidine kinase GII88_RS19680 PF09186 Domain of unknown function (DUF1949) GII88_RS19680 PF01205 Uncharacterized protein family UPF0029 GII88_RS19685 PF03816 Cell envelope-related transcriptional attenuator domain GII88_RS19695 PF00953 Glycosyl transferase family 4 GII88_RS19705 PF00535 Glycosyl transferase family 2 GII88_RS19710 PF02706 Chain length determinant protein GII88_RS19715 PF04932 O-Antigen ligase GII88_RS19720 PF16363 GDP-mannose 4,6 dehydratase GII88_RS19725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII88_RS19725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII88_RS19725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII88_RS19730 PF00534 Glycosyl transferases group 1 GII88_RS19730 PF13439 Glycosyltransferase Family 4 GII88_RS19735 PF01943 Polysaccharide biosynthesis protein GII88_RS19735 PF14667 Polysaccharide biosynthesis C-terminal domain GII88_RS19740 PF02397 Bacterial sugar transferase GII88_RS19745 PF01520 N-acetylmuramoyl-L-alanine amidase GII88_RS19745 PF04122 Putative cell wall binding repeat 2 GII88_RS19750 PF04122 Putative cell wall binding repeat 2 GII88_RS19750 PF08486 Stage II sporulation protein GII88_RS19760 PF03816 Cell envelope-related transcriptional attenuator domain GII88_RS19765 PF02350 UDP-N-acetylglucosamine 2-epimerase GII88_RS19775 PF00483 Nucleotidyl transferase GII88_RS19780 PF00005 ABC transporter GII88_RS19785 PF01061 ABC-2 type transporter GII88_RS19790 PF00535 Glycosyl transferase family 2 GII88_RS19790 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII88_RS19795 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII88_RS19800 PF01467 Cytidylyltransferase-like GII88_RS19805 PF03808 Glycosyl transferase WecB/TagA/CpsF family GII88_RS19810 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII88_RS19815 PF05036 Sporulation related domain GII88_RS19815 PF08239 Bacterial SH3 domain GII88_RS19815 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GII88_RS19820 PF01238 Phosphomannose isomerase type I GII88_RS19825 PF04055 Radical SAM superfamily GII88_RS19830 PF13597 Anaerobic ribonucleoside-triphosphate reductase GII88_RS19830 PF03477 ATP cone domain GII88_RS19835 PF03812 2-keto-3-deoxygluconate permease GII88_RS19840 PF01081 KDPG and KHG aldolase GII88_RS19845 PF00294 pfkB family carbohydrate kinase GII88_RS19850 PF00356 Bacterial regulatory proteins, lacI family GII88_RS19855 PF04962 KduI/IolB family GII88_RS19865 PF00107 Zinc-binding dehydrogenase GII88_RS19865 PF13823 Alcohol dehydrogenase GroES-associated GII88_RS19865 PF08240 Alcohol dehydrogenase GroES-like domain GII88_RS19870 PF00083 Sugar (and other) transporter GII88_RS19875 PF03816 Cell envelope-related transcriptional attenuator domain GII88_RS19885 PF00877 NlpC/P60 family GII88_RS19890 PF09587 Bacterial capsule synthesis protein PGA_cap GII88_RS19895 PF14102 Capsule biosynthesis CapC GII88_RS19900 PF08245 Mur ligase middle domain GII88_RS19905 PF00356 Bacterial regulatory proteins, lacI family GII88_RS19910 PF00294 pfkB family carbohydrate kinase GII88_RS19915 PF05025 RbsD / FucU transport protein family GII88_RS19920 PF00005 ABC transporter GII88_RS19925 PF02653 Branched-chain amino acid transport system / permease component GII88_RS19930 PF13407 Periplasmic binding protein domain GII88_RS19940 PF03306 Alpha-acetolactate decarboxylase GII88_RS19945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII88_RS19945 PF00205 Thiamine pyrophosphate enzyme, central domain GII88_RS19945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII88_RS19950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS19950 PF03466 LysR substrate binding domain GII88_RS19965 PF13404 AsnC-type helix-turn-helix domain GII88_RS19965 PF01037 Lrp/AsnC ligand binding domain GII88_RS19970 PF02417 Chromate transporter GII88_RS19975 PF02417 Chromate transporter GII88_RS19985 PF02706 Chain length determinant protein GII88_RS19985 PF13807 G-rich domain on putative tyrosine kinase GII88_RS19995 PF04434 SWIM zinc finger GII88_RS20000 PF00176 SNF2 family N-terminal domain GII88_RS20000 PF00271 Helicase conserved C-terminal domain GII88_RS20000 PF12419 SNF2 Helicase protein GII88_RS20010 PF00455 DeoR C terminal sensor domain GII88_RS20010 PF08220 DeoR-like helix-turn-helix domain GII88_RS20015 PF00923 Transaldolase/Fructose-6-phosphate aldolase GII88_RS20020 PF00106 short chain dehydrogenase GII88_RS20025 PF03829 PTS system glucitol/sorbitol-specific IIA component GII88_RS20030 PF03612 Sorbitol phosphotransferase enzyme II N-terminus GII88_RS20030 PF07663 Sorbitol phosphotransferase enzyme II C-terminus GII88_RS20035 PF03608 PTS system enzyme II sorbitol-specific factor GII88_RS20045 PF04198 Putative sugar-binding domain GII88_RS20045 PF13936 Helix-turn-helix domain GII88_RS20050 PF00436 Single-strand binding protein family GII88_RS20060 PF14183 YwpF-like protein GII88_RS20065 PF01741 Large-conductance mechanosensitive channel, MscL GII88_RS20070 PF07977 FabA-like domain GII88_RS20075 PF00460 Flagella basal body rod protein GII88_RS20075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII88_RS20080 PF00460 Flagella basal body rod protein GII88_RS20080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII88_RS20090 PF12116 Stage III sporulation protein D GII88_RS20100 PF01047 MarR family GII88_RS20105 PF07690 Major Facilitator Superfamily GII88_RS20110 PF01569 PAP2 superfamily GII88_RS20115 PF02833 DHHA2 domain GII88_RS20115 PF01368 DHH family GII88_RS20120 PF05067 Manganese containing catalase GII88_RS20125 PF09844 Uncharacterized conserved protein (COG2071) GII88_RS20130 PF00571 CBS domain GII88_RS20135 PF01544 CorA-like Mg2+ transporter protein GII88_RS20140 PF00571 CBS domain GII88_RS20140 PF03471 Transporter associated domain GII88_RS20140 PF01595 Cyclin M transmembrane N-terminal domain GII88_RS20145 PF00909 Ammonium Transporter Family GII88_RS20150 PF00543 Nitrogen regulatory protein P-II GII88_RS20155 PF00574 Clp protease GII88_RS20160 PF04542 Sigma-70 region 2 GII88_RS20160 PF08281 Sigma-70, region 4 GII88_RS20160 PF12680 SnoaL-like domain GII88_RS20165 PF01551 Peptidase family M23 GII88_RS20170 PF00583 Acetyltransferase (GNAT) family GII88_RS20175 PF17370 Family of unknown function (DUF5392) GII88_RS20180 PF13091 PLD-like domain GII88_RS20180 PF13396 Phospholipase_D-nuclease N-terminal GII88_RS20190 PF07690 Major Facilitator Superfamily GII88_RS20195 PF03621 MbtH-like protein GII88_RS20200 PF00550 Phosphopantetheine attachment site GII88_RS20200 PF00668 Condensation domain GII88_RS20200 PF13193 AMP-binding enzyme C-terminal domain GII88_RS20200 PF00975 Thioesterase domain GII88_RS20200 PF00501 AMP-binding enzyme GII88_RS20205 PF00857 Isochorismatase family GII88_RS20205 PF00550 Phosphopantetheine attachment site GII88_RS20210 PF13193 AMP-binding enzyme C-terminal domain GII88_RS20210 PF00501 AMP-binding enzyme GII88_RS20215 PF00425 chorismate binding enzyme GII88_RS20220 PF00106 short chain dehydrogenase GII88_RS20225 PF00756 Putative esterase GII88_RS20230 PF01032 FecCD transport family GII88_RS20235 PF01032 FecCD transport family GII88_RS20240 PF01497 Periplasmic binding protein GII88_RS20245 PF12833 Helix-turn-helix domain GII88_RS20245 PF01497 Periplasmic binding protein GII88_RS20250 PF17319 Family of unknown function (DUF5362) GII88_RS20255 PF13460 NAD(P)H-binding GII88_RS20260 PF02082 Transcriptional regulator GII88_RS20275 PF04055 Radical SAM superfamily GII88_RS20275 PF06463 Molybdenum Cofactor Synthesis C GII88_RS20280 PF02634 FdhD/NarQ family GII88_RS20285 PF07690 Major Facilitator Superfamily GII88_RS20290 PF00384 Molybdopterin oxidoreductase GII88_RS20290 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GII88_RS20290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII88_RS20290 PF12838 4Fe-4S dicluster domain GII88_RS20290 PF01568 Molydopterin dinucleotide binding domain GII88_RS20295 PF00092 von Willebrand factor type A domain GII88_RS20300 PF00092 von Willebrand factor type A domain GII88_RS20305 PF08486 Stage II sporulation protein GII88_RS20310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII88_RS20315 PF08680 TATA-box binding GII88_RS20320 PF06612 Protein of unknown function (DUF1146) GII88_RS20325 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GII88_RS20325 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GII88_RS20330 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII88_RS20330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII88_RS20335 PF00231 ATP synthase GII88_RS20340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII88_RS20340 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII88_RS20340 PF00306 ATP synthase alpha/beta chain, C terminal domain GII88_RS20345 PF00213 ATP synthase delta (OSCP) subunit GII88_RS20350 PF00430 ATP synthase B/B' CF(0) GII88_RS20355 PF00137 ATP synthase subunit C GII88_RS20360 PF00119 ATP synthase A chain GII88_RS20365 PF03899 ATP synthase I chain GII88_RS20380 PF00464 Serine hydroxymethyltransferase GII88_RS20385 PF04260 Protein of unknown function (DUF436) GII88_RS20390 PF02502 Ribose/Galactose Isomerase GII88_RS20395 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII88_RS20400 PF02659 Putative manganese efflux pump GII88_RS20405 PF01300 Telomere recombination GII88_RS20405 PF03481 Putative GTP-binding controlling metal-binding GII88_RS20415 PF09551 Stage II sporulation protein R (spore_II_R) GII88_RS20420 PF07690 Major Facilitator Superfamily GII88_RS20425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII88_RS20425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII88_RS20430 PF05116 Sucrose-6F-phosphate phosphohydrolase GII88_RS20435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII88_RS20440 PF00356 Bacterial regulatory proteins, lacI family GII88_RS20445 PF17827 PrmC N-terminal domain GII88_RS20445 PF05175 Methyltransferase small domain GII88_RS20450 PF03462 PCRF domain GII88_RS20450 PF00472 RF-1 domain GII88_RS20455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII88_RS20460 PF13411 MerR HTH family regulatory protein GII88_RS20465 PF03547 Membrane transport protein GII88_RS20470 PF03949 Malic enzyme, NAD binding domain GII88_RS20470 PF00390 Malic enzyme, N-terminal domain GII88_RS20475 PF00265 Thymidine kinase GII88_RS20480 PF01197 Ribosomal protein L31 GII88_RS20485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII88_RS20485 PF07498 Rho termination factor, N-terminal domain GII88_RS20485 PF07497 Rho termination factor, RNA-binding domain GII88_RS20490 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GII88_RS20495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII88_RS20500 PF00923 Transaldolase/Fructose-6-phosphate aldolase GII88_RS20505 PF01116 Fructose-bisphosphate aldolase class-II GII88_RS20510 PF00072 Response regulator receiver domain GII88_RS20515 PF10740 Domain of unknown function (DUF2529) GII88_RS20520 PF00117 Glutamine amidotransferase class-I GII88_RS20520 PF06418 CTP synthase N-terminus GII88_RS20525 PF05066 HB1, ASXL, restriction endonuclease HTH domain GII88_RS20530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII88_RS20530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII88_RS20530 PF02770 Acyl-CoA dehydrogenase, middle domain GII88_RS20535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII88_RS20535 PF02770 Acyl-CoA dehydrogenase, middle domain GII88_RS20535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII88_RS20540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GII88_RS20540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GII88_RS20545 PF00108 Thiolase, N-terminal domain GII88_RS20545 PF02803 Thiolase, C-terminal domain GII88_RS20550 PF13183 4Fe-4S dicluster domain GII88_RS20550 PF02754 Cysteine-rich domain GII88_RS20555 PF13091 PLD-like domain GII88_RS20570 PF03485 Arginyl tRNA synthetase N terminal domain GII88_RS20570 PF05746 DALR anticodon binding domain GII88_RS20570 PF00750 tRNA synthetases class I (R) GII88_RS20575 PF09148 Domain of unknown function (DUF1934) GII88_RS20580 PF00491 Arginase family GII88_RS20585 PF17284 Spermidine synthase tetramerisation domain GII88_RS20600 PF00905 Penicillin binding protein transpeptidase domain GII88_RS20600 PF00912 Transglycosylase GII88_RS20605 PF08741 YwhD family GII88_RS20610 PF02163 Peptidase family M50 GII88_RS20615 PF01361 Tautomerase enzyme GII88_RS20630 PF01966 HD domain GII88_RS20635 PF07293 Protein of unknown function (DUF1450) GII88_RS20645 PF14154 Domain of unknown function (DUF4306) GII88_RS20650 PF03099 Biotin/lipoate A/B protein ligase family GII88_RS20655 PF01494 FAD binding domain GII88_RS20660 PF07690 Major Facilitator Superfamily GII88_RS20670 PF01361 Tautomerase enzyme GII88_RS20680 PF00171 Aldehyde dehydrogenase family GII88_RS20685 PF01614 Bacterial transcriptional regulator GII88_RS20685 PF09339 IclR helix-turn-helix domain GII88_RS20695 PF01515 Phosphate acetyl/butaryl transferase GII88_RS20700 PF06778 Chlorite dismutase GII88_RS20705 PF17735 Biofilm surface layer A GII88_RS20715 PF02386 Cation transport protein GII88_RS20720 PF09671 Spore coat protein (Spore_GerQ) GII88_RS20735 PF00005 ABC transporter GII88_RS20745 PF00072 Response regulator receiver domain GII88_RS20745 PF00196 Bacterial regulatory proteins, luxR family GII88_RS20750 PF04241 Protein of unknown function (DUF423) GII88_RS20755 PF00860 Permease family GII88_RS20760 PF17261 Family of unknown function (DUF5327) GII88_RS20765 PF00171 Aldehyde dehydrogenase family GII88_RS20770 PF03167 Uracil DNA glycosylase superfamily GII88_RS20775 PF00535 Glycosyl transferase family 2 GII88_RS20780 PF08543 Phosphomethylpyrimidine kinase GII88_RS20790 PF08244 Glycosyl hydrolases family 32 C terminal GII88_RS20790 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII88_RS20795 PF02378 Phosphotransferase system, EIIC GII88_RS20795 PF00367 phosphotransferase system, EIIB GII88_RS20800 PF03123 CAT RNA binding domain GII88_RS20800 PF00874 PRD domain GII88_RS20810 PF02225 PA domain GII88_RS20810 PF00082 Subtilase family GII88_RS20810 PF13860 FlgD Ig-like domain GII88_RS20810 PF05922 Peptidase inhibitor I9 GII88_RS20820 PF00296 Luciferase-like monooxygenase GII88_RS20825 PF00881 Nitroreductase family GII88_RS20830 PF07687 Peptidase dimerisation domain GII88_RS20830 PF01546 Peptidase family M20/M25/M40 GII88_RS20840 PF01098 Cell cycle protein GII88_RS20845 PF07670 Nucleoside recognition GII88_RS20855 PF17368 Spore morphogenesis and germination YwcE GII88_RS20865 PF00583 Acetyltransferase (GNAT) family GII88_RS20870 PF00005 ABC transporter GII88_RS20875 PF00005 ABC transporter GII88_RS20895 PF00196 Bacterial regulatory proteins, luxR family GII88_RS20895 PF00072 Response regulator receiver domain GII88_RS20900 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GII88_RS20905 PF00510 Cytochrome c oxidase subunit III GII88_RS20910 PF00115 Cytochrome C and Quinol oxidase polypeptide I GII88_RS20915 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GII88_RS20915 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GII88_RS20920 PF16363 GDP-mannose 4,6 dehydratase GII88_RS20940 PF04341 Protein of unknown function, DUF485 GII88_RS20945 PF00474 Sodium:solute symporter family GII88_RS20950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII88_RS20950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII88_RS20955 PF01261 Xylose isomerase-like TIM barrel GII88_RS20960 PF00480 ROK family GII88_RS20965 PF02581 Thiamine monophosphate synthase GII88_RS20970 PF02110 Hydroxyethylthiazole kinase family GII88_RS20975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII88_RS20975 PF03466 LysR substrate binding domain GII88_RS20990 PF03788 LrgA family GII88_RS20995 PF04172 LrgB-like family GII88_RS21005 PF00474 Sodium:solute symporter family GII88_RS21010 PF10672 S-adenosylmethionine-dependent methyltransferase GII88_RS21010 PF17785 PUA-like domain GII88_RS21015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII88_RS21020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII88_RS21020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII88_RS21025 PF01501 Glycosyl transferase family 8 GII88_RS21035 PF07730 Histidine kinase GII88_RS21035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS21040 PF00072 Response regulator receiver domain GII88_RS21040 PF00196 Bacterial regulatory proteins, luxR family GII88_RS21045 PF03176 MMPL family GII88_RS21050 PF09529 Integral membrane protein (intg_mem_TP0381) GII88_RS21055 PF07690 Major Facilitator Superfamily GII88_RS21060 PF13378 Enolase C-terminal domain-like GII88_RS21060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII88_RS21065 PF01081 KDPG and KHG aldolase GII88_RS21070 PF00294 pfkB family carbohydrate kinase GII88_RS21075 PF09339 IclR helix-turn-helix domain GII88_RS21075 PF01614 Bacterial transcriptional regulator GII88_RS21080 PF02225 PA domain GII88_RS21080 PF04389 Peptidase family M28 GII88_RS21085 PF07690 Major Facilitator Superfamily GII88_RS21095 PF04607 Region found in RelA / SpoT proteins GII88_RS21105 PF12459 D-Ala-teichoic acid biosynthesis protein GII88_RS21110 PF13193 AMP-binding enzyme C-terminal domain GII88_RS21110 PF00501 AMP-binding enzyme GII88_RS21115 PF03062 MBOAT, membrane-bound O-acyltransferase family GII88_RS21120 PF00550 Phosphopantetheine attachment site GII88_RS21125 PF04914 DltD protein GII88_RS21130 PF01063 Amino-transferase class IV GII88_RS21135 PF07690 Major Facilitator Superfamily GII88_RS21140 PF02056 Family 4 glycosyl hydrolase GII88_RS21140 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII88_RS21145 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GII88_RS21150 PF02378 Phosphotransferase system, EIIC GII88_RS21155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII88_RS21160 PF05043 Mga helix-turn-helix domain GII88_RS21160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII88_RS21160 PF08279 HTH domain GII88_RS21160 PF00874 PRD domain GII88_RS21165 PF02245 Methylpurine-DNA glycosylase (MPG) GII88_RS21170 PF00392 Bacterial regulatory proteins, gntR family GII88_RS21170 PF07729 FCD domain GII88_RS21175 PF00285 Citrate synthase, C-terminal domain GII88_RS21180 PF03972 MmgE/PrpD family GII88_RS21200 PF00664 ABC transporter transmembrane region GII88_RS21200 PF00005 ABC transporter GII88_RS21205 PF13472 GDSL-like Lipase/Acylhydrolase family GII88_RS21210 PF17735 Biofilm surface layer A GII88_RS21215 PF17735 Biofilm surface layer A GII88_RS21220 PF07690 Major Facilitator Superfamily GII88_RS21225 PF12679 ABC-2 family transporter protein GII88_RS21230 PF00005 ABC transporter GII88_RS21230 PF13732 Domain of unknown function (DUF4162) GII88_RS21235 PF13396 Phospholipase_D-nuclease N-terminal GII88_RS21250 PF08281 Sigma-70, region 4 GII88_RS21250 PF04542 Sigma-70 region 2 GII88_RS21255 PF07690 Major Facilitator Superfamily GII88_RS21260 PF06628 Catalase-related immune-responsive GII88_RS21260 PF00199 Catalase GII88_RS21265 PF06628 Catalase-related immune-responsive GII88_RS21265 PF00199 Catalase GII88_RS21270 PF01475 Ferric uptake regulator family GII88_RS21275 PF00762 Ferrochelatase GII88_RS21280 PF12679 ABC-2 family transporter protein GII88_RS21285 PF00005 ABC transporter GII88_RS21300 PF00005 ABC transporter GII88_RS21320 PF00082 Subtilase family GII88_RS21325 PF03412 Peptidase C39 family GII88_RS21325 PF00664 ABC transporter transmembrane region GII88_RS21325 PF00005 ABC transporter GII88_RS21335 PF16934 Two-component Enterococcus faecalis cytolysin (EFC) GII88_RS21340 PF14867 Lantibiotic alpha GII88_RS21350 PF00544 Pectate lyase GII88_RS21355 PF01256 Carbohydrate kinase GII88_RS21360 PF00005 ABC transporter GII88_RS21360 PF00664 ABC transporter transmembrane region GII88_RS21365 PF00664 ABC transporter transmembrane region GII88_RS21365 PF00005 ABC transporter GII88_RS21370 PF02322 Cytochrome bd terminal oxidase subunit II GII88_RS21375 PF01654 Cytochrome bd terminal oxidase subunit I GII88_RS21385 PF01226 Formate/nitrite transporter GII88_RS21395 PF03949 Malic enzyme, NAD binding domain GII88_RS21395 PF00390 Malic enzyme, N-terminal domain GII88_RS21395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII88_RS21400 PF03553 Na+/H+ antiporter family GII88_RS21405 PF00206 Lyase GII88_RS21405 PF10415 Fumarase C C-terminus GII88_RS21410 PF00710 Asparaginase, N-terminal GII88_RS21410 PF17763 Glutaminase/Asparaginase C-terminal domain GII88_RS21415 PF01381 Helix-turn-helix GII88_RS21420 PF10282 Lactonase, 7-bladed beta-propeller GII88_RS21425 PF00486 Transcriptional regulatory protein, C terminal GII88_RS21425 PF00072 Response regulator receiver domain GII88_RS21430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS21440 PF00005 ABC transporter GII88_RS21445 PF02687 FtsX-like permease family GII88_RS21450 PF06486 Protein of unknown function (DUF1093) GII88_RS21460 PF01522 Polysaccharide deacetylase GII88_RS21465 PF00392 Bacterial regulatory proteins, gntR family GII88_RS21465 PF00155 Aminotransferase class I and II GII88_RS21475 PF03390 2-hydroxycarboxylate transporter family GII88_RS21480 PF03009 Glycerophosphoryl diester phosphodiesterase family GII88_RS21485 PF05901 Excalibur calcium-binding domain GII88_RS21495 PF00884 Sulfatase GII88_RS21500 PF17353 Family of unknown function (DUF5381) GII88_RS21505 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII88_RS21505 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII88_RS21510 PF01316 Arginine repressor, DNA binding domain GII88_RS21510 PF02863 Arginine repressor, C-terminal domain GII88_RS21525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GII88_RS21525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GII88_RS21530 PF13520 Amino acid permease GII88_RS21535 PF00696 Amino acid kinase family GII88_RS21550 PF02378 Phosphotransferase system, EIIC GII88_RS21560 PF04542 Sigma-70 region 2 GII88_RS21560 PF08281 Sigma-70, region 4 GII88_RS21565 PF04055 Radical SAM superfamily GII88_RS21585 PF00004 ATPase family associated with various cellular activities (AAA) GII88_RS21585 PF17862 AAA+ lid domain GII88_RS21585 PF06480 FtsH Extracellular GII88_RS21585 PF01434 Peptidase family M41 GII88_RS21590 PF01546 Peptidase family M20/M25/M40 GII88_RS21590 PF07687 Peptidase dimerisation domain GII88_RS21600 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII88_RS21600 PF08244 Glycosyl hydrolases family 32 C terminal GII88_RS21605 PF01306 LacY proton/sugar symporter GII88_RS21610 PF00356 Bacterial regulatory proteins, lacI family GII88_RS21625 PF01717 Cobalamin-independent synthase, Catalytic domain GII88_RS21630 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase GII88_RS21635 PF00535 Glycosyl transferase family 2 GII88_RS21640 PF01370 NAD dependent epimerase/dehydratase family GII88_RS21665 PF07662 Na+ dependent nucleoside transporter C-terminus GII88_RS21665 PF01773 Na+ dependent nucleoside transporter N-terminus GII88_RS21680 PF00232 Glycosyl hydrolase family 1 GII88_RS21685 PF00367 phosphotransferase system, EIIB GII88_RS21685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII88_RS21685 PF02378 Phosphotransferase system, EIIC GII88_RS21690 PF03123 CAT RNA binding domain GII88_RS21690 PF00874 PRD domain GII88_RS21695 PF02361 Cobalt transport protein GII88_RS21700 PF00005 ABC transporter GII88_RS21705 PF09819 ABC-type cobalt transport system, permease component GII88_RS21710 PF03070 TENA/THI-4/PQQC family GII88_RS21715 PF00463 Isocitrate lyase family GII88_RS21720 PF01274 Malate synthase GII88_RS21730 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase GII88_RS21735 PF02687 FtsX-like permease family GII88_RS21740 PF00005 ABC transporter GII88_RS21745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS21750 PF00072 Response regulator receiver domain GII88_RS21750 PF00486 Transcriptional regulatory protein, C terminal GII88_RS21755 PF00232 Glycosyl hydrolase family 1 GII88_RS21760 PF00367 phosphotransferase system, EIIB GII88_RS21760 PF02378 Phosphotransferase system, EIIC GII88_RS21760 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII88_RS21770 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family GII88_RS21775 PF02463 RecF/RecN/SMC N terminal domain GII88_RS21780 PF16369 C-terminal lipocalin-like domain GII88_RS21780 PF04616 Glycosyl hydrolases family 43 GII88_RS21785 PF00270 DEAD/DEAH box helicase GII88_RS21785 PF00271 Helicase conserved C-terminal domain GII88_RS21785 PF03880 DbpA RNA binding domain GII88_RS21815 PF02885 Glycosyl transferase family, helical bundle domain GII88_RS21815 PF00591 Glycosyl transferase family, a/b domain GII88_RS21815 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GII88_RS21820 PF07662 Na+ dependent nucleoside transporter C-terminus GII88_RS21820 PF01773 Na+ dependent nucleoside transporter N-terminus GII88_RS21825 PF01791 DeoC/LacD family aldolase GII88_RS21830 PF04198 Putative sugar-binding domain GII88_RS21845 PF00990 Diguanylate cyclase, GGDEF domain GII88_RS21850 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) GII88_RS21860 PF03170 Bacterial cellulose synthase subunit GII88_RS21865 PF00155 Aminotransferase class I and II GII88_RS21880 PF07478 D-ala D-ala ligase C-terminus GII88_RS21890 PF01116 Fructose-bisphosphate aldolase class-II GII88_RS21895 PF01261 Xylose isomerase-like TIM barrel GII88_RS21900 PF01261 Xylose isomerase-like TIM barrel GII88_RS21905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII88_RS21905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII88_RS21910 PF07690 Major Facilitator Superfamily GII88_RS21915 PF01261 Xylose isomerase-like TIM barrel GII88_RS21920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII88_RS21920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII88_RS21920 PF00205 Thiamine pyrophosphate enzyme, central domain GII88_RS21925 PF00294 pfkB family carbohydrate kinase GII88_RS21930 PF04962 KduI/IolB family GII88_RS21935 PF00171 Aldehyde dehydrogenase family GII88_RS21940 PF08220 DeoR-like helix-turn-helix domain GII88_RS21940 PF00455 DeoR C terminal sensor domain GII88_RS21945 PF00248 Aldo/keto reductase family GII88_RS21950 PF03009 Glycerophosphoryl diester phosphodiesterase family GII88_RS21955 PF07690 Major Facilitator Superfamily GII88_RS21960 PF00183 Hsp90 protein GII88_RS21965 PF00005 ABC transporter GII88_RS21965 PF12848 ABC transporter GII88_RS21990 PF01497 Periplasmic binding protein GII88_RS22010 PF07664 Ferrous iron transport protein B C terminus GII88_RS22010 PF17910 FeoB cytosolic helical domain GII88_RS22010 PF02421 Ferrous iron transport protein B GII88_RS22010 PF07670 Nucleoside recognition GII88_RS22020 PF01757 Acyltransferase family GII88_RS22025 PF02687 FtsX-like permease family GII88_RS22030 PF00005 ABC transporter GII88_RS22035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS22040 PF00072 Response regulator receiver domain GII88_RS22040 PF00486 Transcriptional regulatory protein, C terminal GII88_RS22050 PF05227 CHASE3 domain GII88_RS22050 PF00672 HAMP domain GII88_RS22050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII88_RS22055 PF01235 Sodium:alanine symporter family GII88_RS22060 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GII88_RS22060 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GII88_RS22065 PF07745 Glycosyl hydrolase family 53 GII88_RS22070 PF08532 Beta-galactosidase trimerisation domain GII88_RS22070 PF08533 Beta-galactosidase C-terminal domain GII88_RS22070 PF02449 Beta-galactosidase GII88_RS22075 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS22080 PF00528 Binding-protein-dependent transport system inner membrane component GII88_RS22085 PF13416 Bacterial extracellular solute-binding protein GII88_RS22090 PF00356 Bacterial regulatory proteins, lacI family GII88_RS22095 PF08544 GHMP kinases C terminal GII88_RS22095 PF00288 GHMP kinases N terminal domain GII88_RS22095 PF10509 Galactokinase galactose-binding signature GII88_RS22100 PF16363 GDP-mannose 4,6 dehydratase GII88_RS22105 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GII88_RS22105 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GII88_RS22110 PF01325 Iron dependent repressor, N-terminal DNA binding domain GII88_RS22110 PF00480 ROK family GII88_RS22115 PF07729 FCD domain GII88_RS22115 PF00392 Bacterial regulatory proteins, gntR family GII88_RS22120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII88_RS22120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII88_RS22125 PF02447 GntP family permease GII88_RS22130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII88_RS22130 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII88_RS22135 PF00465 Iron-containing alcohol dehydrogenase GII88_RS22135 PF00171 Aldehyde dehydrogenase family GII88_RS22140 PF00578 AhpC/TSA family GII88_RS22145 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII88_RS22145 PF13192 Thioredoxin domain GII88_RS22170 PF00005 ABC transporter GII88_RS22185 PF00072 Response regulator receiver domain GII88_RS22185 PF00196 Bacterial regulatory proteins, luxR family GII88_RS22200 PF00005 ABC transporter GII88_RS22200 PF00027 Cyclic nucleotide-binding domain GII88_RS22210 PF02590 Predicted SPOUT methyltransferase GII88_RS22215 PF14116 YyzF-like protein GII88_RS22225 PF00583 Acetyltransferase (GNAT) family GII88_RS22240 PF13180 PDZ domain GII88_RS22245 PF00753 Metallo-beta-lactamase superfamily GII88_RS22250 PF09648 YycH protein GII88_RS22255 PF07435 YycH protein GII88_RS22260 PF13426 PAS domain GII88_RS22260 PF00512 His Kinase A (phospho-acceptor) domain GII88_RS22260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII88_RS22260 PF00672 HAMP domain GII88_RS22265 PF00072 Response regulator receiver domain GII88_RS22265 PF00486 Transcriptional regulatory protein, C terminal GII88_RS22290 PF00293 NUDIX domain GII88_RS22295 PF00709 Adenylosuccinate synthetase GII88_RS22305 PF03796 DnaB-like helicase C terminal domain GII88_RS22305 PF00772 DnaB-like helicase N terminal domain GII88_RS22310 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GII88_RS22320 PF14174 YycC-like protein GII88_RS22325 PF07690 Major Facilitator Superfamily GII88_RS22330 PF01979 Amidohydrolase family GII88_RS22335 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GII88_RS22340 PF07702 UTRA domain GII88_RS22340 PF00392 Bacterial regulatory proteins, gntR family GII88_RS22345 PF01380 SIS domain GII88_RS22350 PF02378 Phosphotransferase system, EIIC GII88_RS22350 PF00367 phosphotransferase system, EIIB GII88_RS22355 PF01281 Ribosomal protein L9, N-terminal domain GII88_RS22355 PF03948 Ribosomal protein L9, C-terminal domain GII88_RS22360 PF02272 DHHA1 domain GII88_RS22360 PF01368 DHH family GII88_RS22365 PF09991 Predicted membrane protein (DUF2232) GII88_RS22370 PF07875 Coat F domain GII88_RS22375 PF00582 Universal stress protein family GII88_RS22380 PF00916 Sulfate permease family GII88_RS22380 PF01740 STAS domain GII88_RS22385 PF07690 Major Facilitator Superfamily GII88_RS22390 PF01084 Ribosomal protein S18 GII88_RS22395 PF00436 Single-strand binding protein family GII88_RS22400 PF01250 Ribosomal protein S6 GII88_RS22405 PF01926 50S ribosome-binding GTPase GII88_RS22405 PF06071 Protein of unknown function (DUF933) GII88_RS22415 PF06107 Bacterial protein of unknown function (DUF951) GII88_RS22425 PF06866 Protein of unknown function (DUF1256) GII88_RS22430 PF02195 ParB-like nuclease domain GII88_RS22430 PF17762 HTH domain found in ParB protein GII88_RS22435 PF13614 AAA domain GII88_RS22440 PF02627 Carboxymuconolactone decarboxylase family GII88_RS22450 PF17762 HTH domain found in ParB protein GII88_RS22450 PF02195 ParB-like nuclease domain GII88_RS22455 PF02527 rRNA small subunit methyltransferase G GII88_RS22460 PF13932 GidA associated domain GII88_RS22460 PF01134 Glucose inhibited division protein A GII88_RS22465 PF01926 50S ribosome-binding GTPase GII88_RS22465 PF10396 GTP-binding protein TrmE N-terminus GII88_RS22465 PF12631 MnmE helical domain GII88_RS22470 PF14804 Jag N-terminus GII88_RS22470 PF01424 R3H domain GII88_RS22475 PF02096 60Kd inner membrane protein GII88_RS22480 PF00825 Ribonuclease P GII88_RS22485 PF00468 Ribosomal protein L34 GII88_RS22505 PF02600 Disulfide bond formation protein DsbB GII88_RS22525 PF01446 Replication protein GII88_RS22530 PF13181 Tetratricopeptide repeat GII88_RS22530 PF18801 response regulator aspartate phosphatase H, N terminal