BMQ_RS00005 SM00382 ATPases associated with a variety of cellular activities BMQ_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BMQ_RS00010 SM00480 DNA polymerase III beta subunit BMQ_RS00025 SM00387 Histidine kinase-like ATPases BMQ_RS00025 SM00433 TopoisomeraseII BMQ_RS00030 SM00434 DNA Topoisomerase IV BMQ_RS00065 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS00065 SM01240 BMQ_RS00065 BMQ_RS00070 SM00936 Penicillin-binding protein 5, C-terminal domain BMQ_RS00105 SM00257 Lysin motif BMQ_RS00105 SM00636 BMQ_RS00105 BMQ_RS00120 SM00382 ATPases associated with a variety of cellular activities BMQ_RS00130 SM00493 BMQ_RS00130 BMQ_RS00280 SM00966 SpoVT / AbrB like domain BMQ_RS00295 SM00493 BMQ_RS00295 BMQ_RS00300 SM00650 Ribosomal RNA adenine dimethylases BMQ_RS00345 SM01400 BMQ_RS00345 BMQ_RS00365 SM00487 DEAD-like helicases superfamily BMQ_RS00365 SM00490 helicase superfamily c-terminal domain BMQ_RS00365 SM00982 BMQ_RS00365 BMQ_RS00365 SM01058 CarD-like/TRCF domain BMQ_RS00370 SM00966 SpoVT / AbrB like domain BMQ_RS00385 SM00363 S4 RNA-binding domain BMQ_RS00405 SM00316 Ribosomal protein S1-like RNA-binding domain BMQ_RS00420 SM00331 Sigma factor PP2C-like phosphatases BMQ_RS00420 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BMQ_RS00430 SM00220 Serine/Threonine protein kinases, catalytic domain BMQ_RS00435 SM00977 TilS substrate C-terminal domain BMQ_RS00445 SM00382 ATPases associated with a variety of cellular activities BMQ_RS00480 SM00905 Dihydroneopterin aldolase BMQ_RS00525 SM00382 ATPases associated with a variety of cellular activities BMQ_RS00525 SM01086 C-terminal, D2-small domain, of ClpB protein BMQ_RS00530 SM00382 ATPases associated with a variety of cellular activities BMQ_RS00540 SM00670 Large family of predicted nucleotide-binding domains BMQ_RS00565 SM00840 BMQ_RS00565 BMQ_RS00570 SM00535 Ribonuclease III family BMQ_RS00575 SM00967 RNA 2'-O ribose methyltransferase substrate binding BMQ_RS00585 SM00421 helix_turn_helix, Lux Regulon BMQ_RS00600 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BMQ_RS00600 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BMQ_RS00605 SM00649 Ribosomal protein L11/L12 BMQ_RS00635 SM00663 RNA polymerase I subunit A N-terminus BMQ_RS00655 SM00838 Elongation factor G C-terminus BMQ_RS00655 SM00889 Elongation factor G, domain IV BMQ_RS00665 SM01403 BMQ_RS00665 BMQ_RS00675 SM01403 BMQ_RS00675 BMQ_RS00695 SM01382 BMQ_RS00695 BMQ_RS00695 SM01383 BMQ_RS00695 BMQ_RS00710 SM00322 K homology RNA-binding domain BMQ_RS00730 SM01374 BMQ_RS00730 BMQ_RS00735 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BMQ_RS00795 SM00316 Ribosomal protein S1-like RNA-binding domain BMQ_RS00815 SM00662 RNA polymerases D BMQ_RS00825 SM00382 ATPases associated with a variety of cellular activities BMQ_RS00830 SM00382 ATPases associated with a variety of cellular activities BMQ_RS00860 SM00646 BMQ_RS00860 BMQ_RS00880 SM01251 BMQ_RS00880 BMQ_RS00995 SM00287 Bacterial SH3 domain homologues BMQ_RS01035 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS01040 SM00382 ATPases associated with a variety of cellular activities BMQ_RS01065 SM00448 cheY-homologous receiver domain BMQ_RS01065 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS01070 SM00387 Histidine kinase-like ATPases BMQ_RS01070 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS01100 SM00487 DEAD-like helicases superfamily BMQ_RS01100 SM00490 helicase superfamily c-terminal domain BMQ_RS01125 SM01005 Alanine racemase, C-terminal domain BMQ_RS01150 SM00387 Histidine kinase-like ATPases BMQ_RS01155 SM00331 Sigma factor PP2C-like phosphatases BMQ_RS01175 SM00331 Sigma factor PP2C-like phosphatases BMQ_RS01180 SM00316 Ribosomal protein S1-like RNA-binding domain BMQ_RS01180 SM00732 Likely ribonuclease with RNase H fold. BMQ_RS01185 SM00731 SprT homologues. BMQ_RS01290 SM00382 ATPases associated with a variety of cellular activities BMQ_RS01295 SM00881 CoA binding domain BMQ_RS01320 SM00883 Chaperonin 10 Kd subunit BMQ_RS01340 SM00460 Transglutaminase/protease-like homologues BMQ_RS01375 SM01001 AIR carboxylase BMQ_RS01385 SM00998 Adenylosuccinate lyase C-terminus BMQ_RS01400 SM01211 BMQ_RS01400 BMQ_RS01425 SM00798 AICARFT/IMPCHase bienzyme BMQ_RS01425 SM00851 MGS-like domain BMQ_RS01430 SM01209 BMQ_RS01430 BMQ_RS01430 SM01210 BMQ_RS01430 BMQ_RS01465 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMQ_RS01465 SM00292 breast cancer carboxy-terminal domain BMQ_RS01465 SM00532 Ligase N family BMQ_RS01490 SM00845 GatB domain BMQ_RS01495 SM00046 Diacylglycerol kinase catalytic domain (presumed) BMQ_RS01525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS01525 SM00387 Histidine kinase-like ATPases BMQ_RS01525 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS01545 SM00422 helix_turn_helix, mercury resistance BMQ_RS01565 SM00382 ATPases associated with a variety of cellular activities BMQ_RS01570 SM00062 Bacterial periplasmic substrate-binding proteins BMQ_RS01570 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BMQ_RS01605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS01605 SM00387 Histidine kinase-like ATPases BMQ_RS01605 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS01610 SM00448 cheY-homologous receiver domain BMQ_RS01610 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS01615 SM00014 Acid phosphatase homologues BMQ_RS01685 SM00091 PAS domain BMQ_RS01685 SM00387 Histidine kinase-like ATPases BMQ_RS01690 SM00448 cheY-homologous receiver domain BMQ_RS01705 SM00091 PAS domain BMQ_RS01705 SM00387 Histidine kinase-like ATPases BMQ_RS01705 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS01710 SM00487 DEAD-like helicases superfamily BMQ_RS01710 SM00490 helicase superfamily c-terminal domain BMQ_RS01770 SM01065 Starch binding domain BMQ_RS01790 SM00382 ATPases associated with a variety of cellular activities BMQ_RS01845 SM00226 Low molecular weight phosphatase family BMQ_RS01870 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS01945 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMQ_RS01945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS01945 SM00387 Histidine kinase-like ATPases BMQ_RS01945 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS01995 SM00478 endonuclease III BMQ_RS01995 SM00525 BMQ_RS01995 BMQ_RS02025 SM00382 ATPases associated with a variety of cellular activities BMQ_RS02040 SM00382 ATPases associated with a variety of cellular activities BMQ_RS02180 SM00873 B3/4 domain BMQ_RS02185 SM00567 E-Z type HEAT repeats BMQ_RS02200 SM00763 PrkA AAA domain BMQ_RS02280 SM00729 Elongator protein 3, MiaB family, Radical SAM BMQ_RS02280 SM00876 Biotin and Thiamin Synthesis associated domain BMQ_RS02290 SM00382 ATPases associated with a variety of cellular activities BMQ_RS02325 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMQ_RS02380 SM00287 Bacterial SH3 domain homologues BMQ_RS02395 SM00155 Phospholipase D. Active site motifs. BMQ_RS02415 SM00354 helix_turn _helix lactose operon repressor BMQ_RS02450 SM00354 helix_turn _helix lactose operon repressor BMQ_RS02470 SM00344 helix_turn_helix ASNC type BMQ_RS02500 SM00363 S4 RNA-binding domain BMQ_RS02515 SM00864 Tubulin/FtsZ family, GTPase domain BMQ_RS02515 SM00865 Tubulin/FtsZ family, C-terminal domain BMQ_RS02545 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BMQ_RS02565 SM00829 Enoylreductase BMQ_RS02585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMQ_RS02585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS02665 SM00829 Enoylreductase BMQ_RS02675 SM00382 ATPases associated with a variety of cellular activities BMQ_RS02685 SM00062 Bacterial periplasmic substrate-binding proteins BMQ_RS02685 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BMQ_RS02735 SM00855 Phosphoglycerate mutase family BMQ_RS02750 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS02750 SM01091 Transporter associated domain BMQ_RS02765 SM00382 ATPases associated with a variety of cellular activities BMQ_RS02810 SM00729 Elongator protein 3, MiaB family, Radical SAM BMQ_RS02825 SM00411 bacterial (prokaryotic) histone like domain BMQ_RS02835 SM00382 ATPases associated with a variety of cellular activities BMQ_RS02845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMQ_RS02910 SM00382 ATPases associated with a variety of cellular activities BMQ_RS02930 SM00014 Acid phosphatase homologues BMQ_RS02980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS02985 SM00342 helix_turn_helix, arabinose operon control protein BMQ_RS02985 SM00448 cheY-homologous receiver domain BMQ_RS02990 SM00849 Metallo-beta-lactamase superfamily BMQ_RS03130 SM00914 BMQ_RS03130 BMQ_RS03145 SM00822 BMQ_RS03145 BMQ_RS03240 SM00938 Nitrogen regulatory protein P-II BMQ_RS03250 SM00642 Alpha-amylase domain BMQ_RS03255 SM00354 helix_turn _helix lactose operon repressor BMQ_RS03280 SM00382 ATPases associated with a variety of cellular activities BMQ_RS03325 SM00100 Cyclic nucleotide-monophosphate binding domain BMQ_RS03325 SM00419 helix_turn_helix, cAMP Regulatory protein BMQ_RS03330 SM00859 Semialdehyde dehydrogenase, NAD binding domain BMQ_RS03350 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BMQ_RS03355 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BMQ_RS03375 SM00382 ATPases associated with a variety of cellular activities BMQ_RS03375 SM01086 C-terminal, D2-small domain, of ClpB protein BMQ_RS03385 SM00342 helix_turn_helix, arabinose operon control protein BMQ_RS03435 SM00825 Beta-ketoacyl synthase BMQ_RS03445 SM00382 ATPases associated with a variety of cellular activities BMQ_RS03450 SM00382 ATPases associated with a variety of cellular activities BMQ_RS03500 SM00382 ATPases associated with a variety of cellular activities BMQ_RS03505 SM00382 ATPases associated with a variety of cellular activities BMQ_RS03555 SM00155 Phospholipase D. Active site motifs. BMQ_RS03590 SM01118 BMQ_RS03590 BMQ_RS03600 SM00954 Region found in RelA / SpoT proteins BMQ_RS03620 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS03620 SM00924 MgtE intracellular N domain BMQ_RS03720 SM01350 BMQ_RS03720 BMQ_RS03750 SM00344 helix_turn_helix ASNC type BMQ_RS03770 SM00487 DEAD-like helicases superfamily BMQ_RS03770 SM00490 helicase superfamily c-terminal domain BMQ_RS03790 SM00849 Metallo-beta-lactamase superfamily BMQ_RS03825 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMQ_RS03825 SM00387 Histidine kinase-like ATPases BMQ_RS03830 SM00448 cheY-homologous receiver domain BMQ_RS03830 SM00850 LytTr DNA-binding domain BMQ_RS03855 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BMQ_RS03940 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BMQ_RS03970 SM00448 cheY-homologous receiver domain BMQ_RS03975 SM00387 Histidine kinase-like ATPases BMQ_RS04040 SM00382 ATPases associated with a variety of cellular activities BMQ_RS04060 SM00382 ATPases associated with a variety of cellular activities BMQ_RS04140 SM00091 PAS domain BMQ_RS04140 SM00387 Histidine kinase-like ATPases BMQ_RS04145 SM00448 cheY-homologous receiver domain BMQ_RS04180 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS04205 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS04235 SM00091 PAS domain BMQ_RS04235 SM00387 Histidine kinase-like ATPases BMQ_RS04240 SM00448 cheY-homologous receiver domain BMQ_RS04270 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS04270 SM00382 ATPases associated with a variety of cellular activities BMQ_RS04320 SM00382 ATPases associated with a variety of cellular activities BMQ_RS04320 SM00930 BMQ_RS04320 BMQ_RS04365 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BMQ_RS04365 SM01232 BMQ_RS04365 BMQ_RS04405 SM00382 ATPases associated with a variety of cellular activities BMQ_RS04430 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BMQ_RS04460 SM00899 BMQ_RS04460 BMQ_RS04485 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS04490 SM00829 Enoylreductase BMQ_RS04495 SM00382 ATPases associated with a variety of cellular activities BMQ_RS04500 SM00382 ATPases associated with a variety of cellular activities BMQ_RS04525 SM00346 helix_turn_helix isocitrate lyase regulation BMQ_RS04540 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS04565 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS04570 SM00354 helix_turn _helix lactose operon repressor BMQ_RS04585 SM00382 ATPases associated with a variety of cellular activities BMQ_RS04605 SM00903 Flavin reductase like domain BMQ_RS04635 SM00267 diguanylate cyclase BMQ_RS04635 SM00448 cheY-homologous receiver domain BMQ_RS04655 SM00448 cheY-homologous receiver domain BMQ_RS04660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS04660 SM00387 Histidine kinase-like ATPases BMQ_RS04660 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS04660 SM00448 cheY-homologous receiver domain BMQ_RS04675 SM00855 Phosphoglycerate mutase family BMQ_RS04705 SM00354 helix_turn _helix lactose operon repressor BMQ_RS04735 SM00642 Alpha-amylase domain BMQ_RS04740 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS04740 SM00866 BMQ_RS04740 BMQ_RS04750 SM00796 Allophanate hydrolase subunit 1 BMQ_RS04755 SM00797 Allophanate hydrolase subunit 2 BMQ_RS04800 SM00829 Enoylreductase BMQ_RS04845 SM00357 Cold shock protein domain BMQ_RS04925 SM00854 Bacterial capsule synthesis protein PGA_cap BMQ_RS05150 SM00052 Putative diguanylate phosphodiesterase BMQ_RS05155 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMQ_RS05155 SM00091 PAS domain BMQ_RS05155 SM00267 diguanylate cyclase BMQ_RS05190 SM00387 Histidine kinase-like ATPases BMQ_RS05195 SM00448 cheY-homologous receiver domain BMQ_RS05215 SM00646 BMQ_RS05215 BMQ_RS05230 SM00914 BMQ_RS05230 BMQ_RS05245 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMQ_RS05260 SM00382 ATPases associated with a variety of cellular activities BMQ_RS05295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS05320 SM00052 Putative diguanylate phosphodiesterase BMQ_RS05320 SM00267 diguanylate cyclase BMQ_RS05320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS05340 SM00052 Putative diguanylate phosphodiesterase BMQ_RS05340 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMQ_RS05340 SM00091 PAS domain BMQ_RS05340 SM00267 diguanylate cyclase BMQ_RS05405 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS05485 SM00984 UDP binding domain BMQ_RS05625 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS05625 SM00895 BMQ_RS05625 BMQ_RS05700 SM00465 GIY-YIG type nucleases (URI domain) BMQ_RS05710 SM00835 Cupin BMQ_RS05755 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS05755 SM00866 BMQ_RS05755 BMQ_RS05785 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS05815 SM00382 ATPases associated with a variety of cellular activities BMQ_RS05820 SM01091 Transporter associated domain BMQ_RS05825 SM00422 helix_turn_helix, mercury resistance BMQ_RS05935 SM00387 Histidine kinase-like ATPases BMQ_RS05940 SM00448 cheY-homologous receiver domain BMQ_RS05940 SM00850 LytTr DNA-binding domain BMQ_RS05945 SM00382 ATPases associated with a variety of cellular activities BMQ_RS05965 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS05990 SM00098 Alkaline phosphatase homologues BMQ_RS05995 SM00448 cheY-homologous receiver domain BMQ_RS05995 SM00850 LytTr DNA-binding domain BMQ_RS06000 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMQ_RS06000 SM00091 PAS domain BMQ_RS06000 SM00387 Histidine kinase-like ATPases BMQ_RS06000 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS06000 SM00448 cheY-homologous receiver domain BMQ_RS06035 SM00822 BMQ_RS06035 BMQ_RS06055 SM00729 Elongator protein 3, MiaB family, Radical SAM BMQ_RS06060 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS06060 SM00895 BMQ_RS06060 BMQ_RS06090 SM00091 PAS domain BMQ_RS06090 SM00387 Histidine kinase-like ATPases BMQ_RS06090 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS06130 SM01007 Class II Aldolase and Adducin N-terminal domain BMQ_RS06145 SM00382 ATPases associated with a variety of cellular activities BMQ_RS06175 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS06185 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMQ_RS06185 SM00091 PAS domain BMQ_RS06185 SM00387 Histidine kinase-like ATPases BMQ_RS06185 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS06195 SM00382 ATPases associated with a variety of cellular activities BMQ_RS06195 SM01086 C-terminal, D2-small domain, of ClpB protein BMQ_RS06285 SM00257 Lysin motif BMQ_RS06325 SM01018 B12 binding domain BMQ_RS06365 SM01061 CAT RNA binding domain BMQ_RS06425 SM00914 BMQ_RS06425 BMQ_RS06440 SM00260 Two component signalling adaptor domain BMQ_RS06440 SM00448 cheY-homologous receiver domain BMQ_RS06450 SM00257 Lysin motif BMQ_RS06480 SM00052 Putative diguanylate phosphodiesterase BMQ_RS06540 SM01350 BMQ_RS06540 BMQ_RS06545 SM00382 ATPases associated with a variety of cellular activities BMQ_RS06550 SM00382 ATPases associated with a variety of cellular activities BMQ_RS06560 SM00849 Metallo-beta-lactamase superfamily BMQ_RS06590 SM00861 Transketolase, pyrimidine binding domain BMQ_RS06645 SM00838 Elongation factor G C-terminus BMQ_RS06675 SM00670 Large family of predicted nucleotide-binding domains BMQ_RS06695 SM00878 Biotin carboxylase C-terminal domain BMQ_RS06740 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS06775 SM00851 MGS-like domain BMQ_RS06815 SM00479 BMQ_RS06815 BMQ_RS06815 SM00487 DEAD-like helicases superfamily BMQ_RS06815 SM00491 BMQ_RS06815 BMQ_RS06845 SM00478 endonuclease III BMQ_RS06845 SM00525 BMQ_RS06845 BMQ_RS06940 SM00357 Cold shock protein domain BMQ_RS06950 SM00267 diguanylate cyclase BMQ_RS06960 SM00487 DEAD-like helicases superfamily BMQ_RS06960 SM00490 helicase superfamily c-terminal domain BMQ_RS07000 SM00387 Histidine kinase-like ATPases BMQ_RS07005 SM00421 helix_turn_helix, Lux Regulon BMQ_RS07005 SM00448 cheY-homologous receiver domain BMQ_RS07010 SM00642 Alpha-amylase domain BMQ_RS07015 SM00981 BMQ_RS07015 BMQ_RS07040 SM00382 ATPases associated with a variety of cellular activities BMQ_RS07050 SM00491 BMQ_RS07050 BMQ_RS07145 SM00357 Cold shock protein domain BMQ_RS07160 SM00028 Tetratricopeptide repeats BMQ_RS07185 SM00382 ATPases associated with a variety of cellular activities BMQ_RS07205 SM00382 ATPases associated with a variety of cellular activities BMQ_RS07225 SM00052 Putative diguanylate phosphodiesterase BMQ_RS07225 SM00091 PAS domain BMQ_RS07225 SM00267 diguanylate cyclase BMQ_RS07255 SM00421 helix_turn_helix, Lux Regulon BMQ_RS07255 SM00448 cheY-homologous receiver domain BMQ_RS07280 SM00155 Phospholipase D. Active site motifs. BMQ_RS07295 SM00257 Lysin motif BMQ_RS07295 SM00636 BMQ_RS07295 BMQ_RS07355 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS07355 SM00866 BMQ_RS07355 BMQ_RS07380 SM00098 Alkaline phosphatase homologues BMQ_RS07400 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS07415 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS07440 SM00382 ATPases associated with a variety of cellular activities BMQ_RS07485 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BMQ_RS07505 SM00382 ATPases associated with a variety of cellular activities BMQ_RS07520 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMQ_RS07520 SM00387 Histidine kinase-like ATPases BMQ_RS07520 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS07520 SM00448 cheY-homologous receiver domain BMQ_RS07525 SM00138 Methyltransferase, chemotaxis proteins BMQ_RS07530 SM00331 Sigma factor PP2C-like phosphatases BMQ_RS07530 SM00448 cheY-homologous receiver domain BMQ_RS07545 SM00100 Cyclic nucleotide-monophosphate binding domain BMQ_RS07565 SM00640 Glycosyl hydrolases family 32 BMQ_RS07615 SM00849 Metallo-beta-lactamase superfamily BMQ_RS07635 SM00849 Metallo-beta-lactamase superfamily BMQ_RS07680 SM00354 helix_turn _helix lactose operon repressor BMQ_RS07690 SM00640 Glycosyl hydrolases family 32 BMQ_RS07705 SM00382 ATPases associated with a variety of cellular activities BMQ_RS07730 SM00640 Glycosyl hydrolases family 32 BMQ_RS07745 SM00062 Bacterial periplasmic substrate-binding proteins BMQ_RS07755 SM00382 ATPases associated with a variety of cellular activities BMQ_RS07755 SM00930 BMQ_RS07755 BMQ_RS07810 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS07810 SM00866 BMQ_RS07810 BMQ_RS07855 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS07865 SM01329 BMQ_RS07865 BMQ_RS07885 SM00382 ATPases associated with a variety of cellular activities BMQ_RS07930 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS07985 SM00861 Transketolase, pyrimidine binding domain BMQ_RS07995 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS07995 SM00895 BMQ_RS07995 BMQ_RS08145 SM00342 helix_turn_helix, arabinose operon control protein BMQ_RS08145 SM00871 Bacterial transcription activator, effector binding domain BMQ_RS08205 SM00091 PAS domain BMQ_RS08215 SM00344 helix_turn_helix ASNC type BMQ_RS08255 SM00357 Cold shock protein domain BMQ_RS08265 SM00487 DEAD-like helicases superfamily BMQ_RS08265 SM00490 helicase superfamily c-terminal domain BMQ_RS08270 SM00357 Cold shock protein domain BMQ_RS08335 SM00382 ATPases associated with a variety of cellular activities BMQ_RS08340 SM00382 ATPases associated with a variety of cellular activities BMQ_RS08365 SM00387 Histidine kinase-like ATPases BMQ_RS08380 SM00257 Lysin motif BMQ_RS08380 SM00636 BMQ_RS08380 BMQ_RS08400 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS08430 SM00849 Metallo-beta-lactamase superfamily BMQ_RS08450 SM00710 Parallel beta-helix repeats BMQ_RS08455 SM00382 ATPases associated with a variety of cellular activities BMQ_RS08465 SM00226 Low molecular weight phosphatase family BMQ_RS08475 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS08485 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS08515 SM00014 Acid phosphatase homologues BMQ_RS08550 SM01060 BMQ_RS08550 BMQ_RS08630 SM00387 Histidine kinase-like ATPases BMQ_RS08630 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS08630 SM00448 cheY-homologous receiver domain BMQ_RS08635 SM00448 cheY-homologous receiver domain BMQ_RS08635 SM00850 LytTr DNA-binding domain BMQ_RS08640 SM00354 helix_turn _helix lactose operon repressor BMQ_RS08730 SM00422 helix_turn_helix, mercury resistance BMQ_RS08735 SM00357 Cold shock protein domain BMQ_RS08810 SM00342 helix_turn_helix, arabinose operon control protein BMQ_RS08850 SM00822 BMQ_RS08850 BMQ_RS08905 SM00357 Cold shock protein domain BMQ_RS08915 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS08950 SM00798 AICARFT/IMPCHase bienzyme BMQ_RS08990 SM00860 SMI1 / KNR4 family BMQ_RS09065 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BMQ_RS09080 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS09180 SM00861 Transketolase, pyrimidine binding domain BMQ_RS09195 SM00382 ATPases associated with a variety of cellular activities BMQ_RS09210 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS09215 SM00858 BMQ_RS09215 BMQ_RS09220 SM00382 ATPases associated with a variety of cellular activities BMQ_RS09225 SM01130 BMQ_RS09225 BMQ_RS09240 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMQ_RS09245 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS09245 SM00895 BMQ_RS09245 BMQ_RS09300 SM00914 BMQ_RS09300 BMQ_RS09310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS09310 SM00387 Histidine kinase-like ATPases BMQ_RS09310 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS09315 SM00448 cheY-homologous receiver domain BMQ_RS09315 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS09375 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS09395 SM00855 Phosphoglycerate mutase family BMQ_RS09500 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS09510 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BMQ_RS09510 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMQ_RS09510 SM00493 BMQ_RS09510 BMQ_RS09520 SM00860 SMI1 / KNR4 family BMQ_RS09525 SM00248 ankyrin repeats BMQ_RS09540 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMQ_RS09575 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS09575 SM00895 BMQ_RS09575 BMQ_RS09580 SM01329 BMQ_RS09580 BMQ_RS09605 SM00028 Tetratricopeptide repeats BMQ_RS09605 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS09630 SM00450 Rhodanese Homology Domain BMQ_RS09700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMQ_RS09705 SM00382 ATPases associated with a variety of cellular activities BMQ_RS09710 SM00567 E-Z type HEAT repeats BMQ_RS09710 SM00932 Scaffold protein Nfu/NifU N terminal BMQ_RS09770 SM00855 Phosphoglycerate mutase family BMQ_RS09790 SM00422 helix_turn_helix, mercury resistance BMQ_RS09795 SM00833 Cobalamin synthesis protein cobW C-terminal domain BMQ_RS09805 SM00465 GIY-YIG type nucleases (URI domain) BMQ_RS09815 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BMQ_RS09815 SM00475 5'-3' exonuclease BMQ_RS09860 SM00966 SpoVT / AbrB like domain BMQ_RS09935 SM00387 Histidine kinase-like ATPases BMQ_RS09935 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS09950 SM00642 Alpha-amylase domain BMQ_RS10010 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS10030 SM00448 cheY-homologous receiver domain BMQ_RS10030 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS10035 SM00387 Histidine kinase-like ATPases BMQ_RS10035 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS10055 SM00919 Malic enzyme, NAD binding domain BMQ_RS10055 SM01274 BMQ_RS10055 BMQ_RS10090 SM00062 Bacterial periplasmic substrate-binding proteins BMQ_RS10105 SM00382 ATPases associated with a variety of cellular activities BMQ_RS10110 SM00904 Riboflavin kinase BMQ_RS10125 SM00646 BMQ_RS10125 BMQ_RS10140 SM00644 BMQ_RS10140 BMQ_RS10170 SM00919 Malic enzyme, NAD binding domain BMQ_RS10170 SM01274 BMQ_RS10170 BMQ_RS10215 SM00422 helix_turn_helix, mercury resistance BMQ_RS10290 SM00155 Phospholipase D. Active site motifs. BMQ_RS10300 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS10350 SM00448 cheY-homologous receiver domain BMQ_RS10350 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS10355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS10355 SM00387 Histidine kinase-like ATPases BMQ_RS10355 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS10380 SM00382 ATPases associated with a variety of cellular activities BMQ_RS10400 SM00420 helix_turn_helix, Deoxyribose operon repressor BMQ_RS10400 SM01134 BMQ_RS10400 BMQ_RS10435 SM00422 helix_turn_helix, mercury resistance BMQ_RS10445 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS10475 SM00257 Lysin motif BMQ_RS10480 SM00354 helix_turn _helix lactose operon repressor BMQ_RS10555 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS10575 SM00382 ATPases associated with a variety of cellular activities BMQ_RS10580 SM00327 von Willebrand factor (vWF) type A domain BMQ_RS10590 SM01038 Beta galactosidase small chain BMQ_RS10595 SM00342 helix_turn_helix, arabinose operon control protein BMQ_RS10610 SM00382 ATPases associated with a variety of cellular activities BMQ_RS10680 SM00448 cheY-homologous receiver domain BMQ_RS10680 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS10685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS10685 SM00387 Histidine kinase-like ATPases BMQ_RS10685 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS10690 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS10720 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS10760 SM00316 Ribosomal protein S1-like RNA-binding domain BMQ_RS10795 SM00342 helix_turn_helix, arabinose operon control protein BMQ_RS10805 SM00382 ATPases associated with a variety of cellular activities BMQ_RS10830 SM00382 ATPases associated with a variety of cellular activities BMQ_RS10845 SM00354 helix_turn _helix lactose operon repressor BMQ_RS10875 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BMQ_RS10875 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMQ_RS10875 SM00493 BMQ_RS10875 BMQ_RS10915 SM00155 Phospholipase D. Active site motifs. BMQ_RS11000 SM00341 Helicase and RNase D C-terminal BMQ_RS11000 SM00487 DEAD-like helicases superfamily BMQ_RS11000 SM00490 helicase superfamily c-terminal domain BMQ_RS11000 SM00956 BMQ_RS11000 BMQ_RS11005 SM00091 PAS domain BMQ_RS11005 SM00382 ATPases associated with a variety of cellular activities BMQ_RS11025 SM00490 helicase superfamily c-terminal domain BMQ_RS11035 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMQ_RS11060 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS11065 SM00382 ATPases associated with a variety of cellular activities BMQ_RS11095 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS11105 SM00849 Metallo-beta-lactamase superfamily BMQ_RS11120 SM00257 Lysin motif BMQ_RS11125 SM00382 ATPases associated with a variety of cellular activities BMQ_RS11140 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMQ_RS11140 SM00138 Methyltransferase, chemotaxis proteins BMQ_RS11140 SM00387 Histidine kinase-like ATPases BMQ_RS11140 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS11150 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BMQ_RS11270 SM00028 Tetratricopeptide repeats BMQ_RS11285 SM01266 BMQ_RS11285 BMQ_RS11315 SM00479 BMQ_RS11315 BMQ_RS11340 SM00641 Glycosyl hydrolases family 25 BMQ_RS11480 SM00091 PAS domain BMQ_RS11480 SM00387 Histidine kinase-like ATPases BMQ_RS11480 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS11495 SM00822 BMQ_RS11495 BMQ_RS11550 SM00829 Enoylreductase BMQ_RS11570 SM00882 Coenzyme A transferase BMQ_RS11575 SM00882 Coenzyme A transferase BMQ_RS11625 SM00849 Metallo-beta-lactamase superfamily BMQ_RS11705 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS11715 SM00382 ATPases associated with a variety of cellular activities BMQ_RS11745 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS11745 SM00866 BMQ_RS11745 BMQ_RS11760 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS11765 SM00849 Metallo-beta-lactamase superfamily BMQ_RS11775 SM00450 Rhodanese Homology Domain BMQ_RS11830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMQ_RS11835 SM00641 Glycosyl hydrolases family 25 BMQ_RS11850 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS11870 SM00849 Metallo-beta-lactamase superfamily BMQ_RS11875 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMQ_RS11890 SM00382 ATPases associated with a variety of cellular activities BMQ_RS11980 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS12000 SM00479 BMQ_RS12000 BMQ_RS12030 SM00838 Elongation factor G C-terminus BMQ_RS12030 SM00889 Elongation factor G, domain IV BMQ_RS12070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMQ_RS12070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS12110 SM00346 helix_turn_helix isocitrate lyase regulation BMQ_RS12115 SM00878 Biotin carboxylase C-terminal domain BMQ_RS12125 SM00797 Allophanate hydrolase subunit 2 BMQ_RS12130 SM00796 Allophanate hydrolase subunit 1 BMQ_RS12150 SM00642 Alpha-amylase domain BMQ_RS12180 SM00487 DEAD-like helicases superfamily BMQ_RS12180 SM00490 helicase superfamily c-terminal domain BMQ_RS12195 SM00421 helix_turn_helix, Lux Regulon BMQ_RS12195 SM00448 cheY-homologous receiver domain BMQ_RS12200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMQ_RS12215 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS12225 SM00773 Proposed nucleic acid binding domain BMQ_RS12245 SM01131 BMQ_RS12245 BMQ_RS12265 SM00563 Phosphate acyltransferases BMQ_RS12320 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS12415 SM00434 DNA Topoisomerase IV BMQ_RS12420 SM00387 Histidine kinase-like ATPases BMQ_RS12420 SM00433 TopoisomeraseII BMQ_RS12425 SM00881 CoA binding domain BMQ_RS12430 SM01207 BMQ_RS12430 BMQ_RS12490 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BMQ_RS12520 SM01092 CO dehydrogenase flavoprotein C-terminal domain BMQ_RS12525 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BMQ_RS12585 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS12660 SM00422 helix_turn_helix, mercury resistance BMQ_RS12670 SM00947 Carbonic anhydrase BMQ_RS12680 SM00448 cheY-homologous receiver domain BMQ_RS12680 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS12685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS12685 SM00387 Histidine kinase-like ATPases BMQ_RS12685 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS12700 SM00860 SMI1 / KNR4 family BMQ_RS12815 SM00914 BMQ_RS12815 BMQ_RS12845 SM00919 Malic enzyme, NAD binding domain BMQ_RS12845 SM01274 BMQ_RS12845 BMQ_RS12860 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMQ_RS12935 SM00914 BMQ_RS12935 BMQ_RS12960 SM00382 ATPases associated with a variety of cellular activities BMQ_RS12970 SM00421 helix_turn_helix, Lux Regulon BMQ_RS12970 SM00448 cheY-homologous receiver domain BMQ_RS13035 SM00382 ATPases associated with a variety of cellular activities BMQ_RS13055 SM00248 ankyrin repeats BMQ_RS13115 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS13140 SM00420 helix_turn_helix, Deoxyribose operon repressor BMQ_RS13140 SM01134 BMQ_RS13140 BMQ_RS13190 SM00382 ATPases associated with a variety of cellular activities BMQ_RS13205 SM00357 Cold shock protein domain BMQ_RS13210 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS13220 SM00357 Cold shock protein domain BMQ_RS13255 SM00829 Enoylreductase BMQ_RS13265 SM00850 LytTr DNA-binding domain BMQ_RS13280 SM00257 Lysin motif BMQ_RS13295 SM00835 Cupin BMQ_RS13315 SM00014 Acid phosphatase homologues BMQ_RS13410 SM00860 SMI1 / KNR4 family BMQ_RS13425 SM00382 ATPases associated with a variety of cellular activities BMQ_RS13450 SM00354 helix_turn _helix lactose operon repressor BMQ_RS13515 SM00062 Bacterial periplasmic substrate-binding proteins BMQ_RS13555 SM01133 BMQ_RS13555 BMQ_RS13560 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BMQ_RS13585 SM00641 Glycosyl hydrolases family 25 BMQ_RS13600 SM01207 BMQ_RS13600 BMQ_RS13620 SM00849 Metallo-beta-lactamase superfamily BMQ_RS13670 SM00854 Bacterial capsule synthesis protein PGA_cap BMQ_RS13680 SM00052 Putative diguanylate phosphodiesterase BMQ_RS13745 SM00829 Enoylreductase BMQ_RS13750 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS13750 SM00895 BMQ_RS13750 BMQ_RS13775 SM01091 Transporter associated domain BMQ_RS13800 SM00382 ATPases associated with a variety of cellular activities BMQ_RS13805 SM00382 ATPases associated with a variety of cellular activities BMQ_RS13845 SM00318 Staphylococcal nuclease homologues BMQ_RS13850 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BMQ_RS13910 SM00346 helix_turn_helix isocitrate lyase regulation BMQ_RS13965 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS13965 SM00895 BMQ_RS13965 BMQ_RS13985 SM00382 ATPases associated with a variety of cellular activities BMQ_RS14080 SM00387 Histidine kinase-like ATPases BMQ_RS14080 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS14085 SM00448 cheY-homologous receiver domain BMQ_RS14085 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS14110 SM00861 Transketolase, pyrimidine binding domain BMQ_RS14150 SM00871 Bacterial transcription activator, effector binding domain BMQ_RS14170 SM00382 ATPases associated with a variety of cellular activities BMQ_RS14175 SM00382 ATPases associated with a variety of cellular activities BMQ_RS14195 SM00938 Nitrogen regulatory protein P-II BMQ_RS14240 SM01324 BMQ_RS14240 BMQ_RS14275 SM00382 ATPases associated with a variety of cellular activities BMQ_RS14320 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BMQ_RS14325 SM00354 helix_turn _helix lactose operon repressor BMQ_RS14365 SM00563 Phosphate acyltransferases BMQ_RS14400 SM00988 UreE urease accessory protein, N-terminal domain BMQ_RS14425 SM00257 Lysin motif BMQ_RS14475 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS14495 SM00382 ATPases associated with a variety of cellular activities BMQ_RS14545 SM01091 Transporter associated domain BMQ_RS14560 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS14595 SM00830 Chorismate mutase type II BMQ_RS14645 SM01060 BMQ_RS14645 BMQ_RS14710 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS14745 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS14775 SM00287 Bacterial SH3 domain homologues BMQ_RS14775 SM00646 BMQ_RS14775 BMQ_RS14785 SM00966 SpoVT / AbrB like domain BMQ_RS14800 SM00240 Forkhead associated domain BMQ_RS14800 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS14835 SM00046 Diacylglycerol kinase catalytic domain (presumed) BMQ_RS14860 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS14875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMQ_RS14875 SM00091 PAS domain BMQ_RS14930 SM00422 helix_turn_helix, mercury resistance BMQ_RS14945 SM00870 BMQ_RS14945 BMQ_RS14950 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS14965 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS15010 SM00919 Malic enzyme, NAD binding domain BMQ_RS15010 SM01274 BMQ_RS15010 BMQ_RS15060 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS15065 SM00422 helix_turn_helix, mercury resistance BMQ_RS15230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMQ_RS15255 SM00257 Lysin motif BMQ_RS15255 SM00646 BMQ_RS15255 BMQ_RS15305 SM00829 Enoylreductase BMQ_RS15320 SM00871 Bacterial transcription activator, effector binding domain BMQ_RS15415 SM00357 Cold shock protein domain BMQ_RS15465 SM00382 ATPases associated with a variety of cellular activities BMQ_RS15480 SM00257 Lysin motif BMQ_RS15495 SM00829 Enoylreductase BMQ_RS15500 SM00829 Enoylreductase BMQ_RS15555 SM00420 helix_turn_helix, Deoxyribose operon repressor BMQ_RS15555 SM01134 BMQ_RS15555 BMQ_RS15570 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BMQ_RS15570 SM00534 ATPase domain of DNA mismatch repair MUTS family BMQ_RS15585 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS15595 SM00354 helix_turn _helix lactose operon repressor BMQ_RS15610 SM00729 Elongator protein 3, MiaB family, Radical SAM BMQ_RS15715 SM00342 helix_turn_helix, arabinose operon control protein BMQ_RS15725 SM00421 helix_turn_helix, Lux Regulon BMQ_RS15725 SM00448 cheY-homologous receiver domain BMQ_RS15785 SM01350 BMQ_RS15785 BMQ_RS15790 SM00861 Transketolase, pyrimidine binding domain BMQ_RS15805 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMQ_RS15835 SM00382 ATPases associated with a variety of cellular activities BMQ_RS15845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS15845 SM00387 Histidine kinase-like ATPases BMQ_RS15845 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS15850 SM00448 cheY-homologous receiver domain BMQ_RS15850 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS15870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMQ_RS15870 SM00387 Histidine kinase-like ATPases BMQ_RS15870 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS15900 SM00422 helix_turn_helix, mercury resistance BMQ_RS15920 SM00342 helix_turn_helix, arabinose operon control protein BMQ_RS15965 SM00382 ATPases associated with a variety of cellular activities BMQ_RS16065 SM00062 Bacterial periplasmic substrate-binding proteins BMQ_RS16070 SM00382 ATPases associated with a variety of cellular activities BMQ_RS16115 SM00829 Enoylreductase BMQ_RS16120 SM00448 cheY-homologous receiver domain BMQ_RS16120 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS16125 SM00387 Histidine kinase-like ATPases BMQ_RS16130 SM00382 ATPases associated with a variety of cellular activities BMQ_RS16165 SM00450 Rhodanese Homology Domain BMQ_RS16165 SM00849 Metallo-beta-lactamase superfamily BMQ_RS16170 SM00450 Rhodanese Homology Domain BMQ_RS16175 SM00450 Rhodanese Homology Domain BMQ_RS16180 SM00450 Rhodanese Homology Domain BMQ_RS16230 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS16230 SM00866 BMQ_RS16230 BMQ_RS16250 SM00894 Excalibur calcium-binding domain BMQ_RS16260 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS16445 SM00357 Cold shock protein domain BMQ_RS16450 SM00357 Cold shock protein domain BMQ_RS16480 SM00382 ATPases associated with a variety of cellular activities BMQ_RS16485 SM00382 ATPases associated with a variety of cellular activities BMQ_RS16505 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS16585 SM01001 AIR carboxylase BMQ_RS16635 SM00382 ATPases associated with a variety of cellular activities BMQ_RS16720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS16720 SM00387 Histidine kinase-like ATPases BMQ_RS16720 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS16740 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS16770 SM00354 helix_turn _helix lactose operon repressor BMQ_RS16810 SM00420 helix_turn_helix, Deoxyribose operon repressor BMQ_RS16810 SM01134 BMQ_RS16810 BMQ_RS16840 SM00829 Enoylreductase BMQ_RS16845 SM00422 helix_turn_helix, mercury resistance BMQ_RS16885 SM00357 Cold shock protein domain BMQ_RS16895 SM00287 Bacterial SH3 domain homologues BMQ_RS16945 SM00631 BMQ_RS16945 BMQ_RS17000 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS17000 SM00895 BMQ_RS17000 BMQ_RS17030 SM00420 helix_turn_helix, Deoxyribose operon repressor BMQ_RS17030 SM01134 BMQ_RS17030 BMQ_RS17060 SM00460 Transglutaminase/protease-like homologues BMQ_RS17075 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS17115 SM01007 Class II Aldolase and Adducin N-terminal domain BMQ_RS17125 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS17130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMQ_RS17160 SM00899 BMQ_RS17160 BMQ_RS17185 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS17330 SM00859 Semialdehyde dehydrogenase, NAD binding domain BMQ_RS17375 SM00100 Cyclic nucleotide-monophosphate binding domain BMQ_RS17390 SM00422 helix_turn_helix, mercury resistance BMQ_RS17410 SM00028 Tetratricopeptide repeats BMQ_RS17465 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS17545 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMQ_RS17560 SM00346 helix_turn_helix isocitrate lyase regulation BMQ_RS17565 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS17580 SM00382 ATPases associated with a variety of cellular activities BMQ_RS17605 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS17605 SM00866 BMQ_RS17605 BMQ_RS17640 SM00829 Enoylreductase BMQ_RS17675 SM00100 Cyclic nucleotide-monophosphate binding domain BMQ_RS17710 SM00344 helix_turn_helix ASNC type BMQ_RS17755 SM00877 BMQ_RS17755 BMQ_RS17775 SM00877 BMQ_RS17775 BMQ_RS17785 SM00877 BMQ_RS17785 BMQ_RS17810 SM00877 BMQ_RS17810 BMQ_RS17820 SM00448 cheY-homologous receiver domain BMQ_RS17820 SM01012 BMQ_RS17820 BMQ_RS17825 SM00387 Histidine kinase-like ATPases BMQ_RS17865 SM00354 helix_turn _helix lactose operon repressor BMQ_RS17870 SM01130 BMQ_RS17870 BMQ_RS18035 SM00860 SMI1 / KNR4 family BMQ_RS18045 SM00870 BMQ_RS18045 BMQ_RS18100 SM00919 Malic enzyme, NAD binding domain BMQ_RS18100 SM01274 BMQ_RS18100 BMQ_RS18220 SM00248 ankyrin repeats BMQ_RS18225 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS18240 SM00342 helix_turn_helix, arabinose operon control protein BMQ_RS18240 SM00871 Bacterial transcription activator, effector binding domain BMQ_RS18250 SM00871 Bacterial transcription activator, effector binding domain BMQ_RS18295 SM00852 Probable molybdopterin binding domain BMQ_RS18305 SM00852 Probable molybdopterin binding domain BMQ_RS18325 SM00382 ATPases associated with a variety of cellular activities BMQ_RS18405 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS18420 SM00357 Cold shock protein domain BMQ_RS18470 SM00052 Putative diguanylate phosphodiesterase BMQ_RS18470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMQ_RS18470 SM00267 diguanylate cyclase BMQ_RS18500 SM00966 SpoVT / AbrB like domain BMQ_RS18565 SM00422 helix_turn_helix, mercury resistance BMQ_RS18580 SM00422 helix_turn_helix, mercury resistance BMQ_RS18605 SM00640 Glycosyl hydrolases family 32 BMQ_RS18645 SM00382 ATPases associated with a variety of cellular activities BMQ_RS18655 SM00387 Histidine kinase-like ATPases BMQ_RS18655 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS18660 SM00448 cheY-homologous receiver domain BMQ_RS18660 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS18730 SM00984 UDP binding domain BMQ_RS18755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMQ_RS18760 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS18830 SM00344 helix_turn_helix ASNC type BMQ_RS18840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMQ_RS18845 SM00448 cheY-homologous receiver domain BMQ_RS18845 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS18850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS18850 SM00387 Histidine kinase-like ATPases BMQ_RS18850 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS18865 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS18865 SM00895 BMQ_RS18865 BMQ_RS18915 SM00382 ATPases associated with a variety of cellular activities BMQ_RS18960 SM00354 helix_turn _helix lactose operon repressor BMQ_RS18965 SM00387 Histidine kinase-like ATPases BMQ_RS18965 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS18990 SM01060 BMQ_RS18990 BMQ_RS19100 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS19170 SM00849 Metallo-beta-lactamase superfamily BMQ_RS19210 SM00257 Lysin motif BMQ_RS19215 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS19215 SM01091 Transporter associated domain BMQ_RS19285 SM00382 ATPases associated with a variety of cellular activities BMQ_RS19290 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS19325 SM00382 ATPases associated with a variety of cellular activities BMQ_RS19355 SM01061 CAT RNA binding domain BMQ_RS19400 SM00014 Acid phosphatase homologues BMQ_RS19410 SM00219 Tyrosine kinase, catalytic domain BMQ_RS19460 SM00882 Coenzyme A transferase BMQ_RS19465 SM00882 Coenzyme A transferase BMQ_RS19485 SM00091 PAS domain BMQ_RS19485 SM00387 Histidine kinase-like ATPases BMQ_RS19485 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS19515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS19515 SM00387 Histidine kinase-like ATPases BMQ_RS19515 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS19570 SM01006 Siderophore biosynthesis protein domain BMQ_RS19605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMQ_RS19605 SM00091 PAS domain BMQ_RS19605 SM00387 Histidine kinase-like ATPases BMQ_RS19605 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS19625 SM00091 PAS domain BMQ_RS19625 SM00382 ATPases associated with a variety of cellular activities BMQ_RS19660 SM00382 ATPases associated with a variety of cellular activities BMQ_RS19665 SM00382 ATPases associated with a variety of cellular activities BMQ_RS19680 SM00861 Transketolase, pyrimidine binding domain BMQ_RS19690 SM00857 Resolvase, N terminal domain BMQ_RS19725 SM00257 Lysin motif BMQ_RS19725 SM00646 BMQ_RS19725 BMQ_RS19730 SM01230 BMQ_RS19730 BMQ_RS19735 SM00422 helix_turn_helix, mercury resistance BMQ_RS19755 SM00382 ATPases associated with a variety of cellular activities BMQ_RS19770 SM00853 MutL C terminal dimerisation domain BMQ_RS19770 SM01340 BMQ_RS19770 BMQ_RS19775 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BMQ_RS19775 SM00534 ATPase domain of DNA mismatch repair MUTS family BMQ_RS19795 SM00729 Elongator protein 3, MiaB family, Radical SAM BMQ_RS19825 SM00322 K homology RNA-binding domain BMQ_RS19825 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMQ_RS19830 SM00382 ATPases associated with a variety of cellular activities BMQ_RS19835 SM00852 Probable molybdopterin binding domain BMQ_RS19845 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS19885 SM00382 ATPases associated with a variety of cellular activities BMQ_RS19895 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS19895 SM00866 BMQ_RS19895 BMQ_RS19900 SM00382 ATPases associated with a variety of cellular activities BMQ_RS19900 SM00843 BMQ_RS19900 BMQ_RS19915 SM00849 Metallo-beta-lactamase superfamily BMQ_RS19920 SM01130 BMQ_RS19920 BMQ_RS19930 SM00859 Semialdehyde dehydrogenase, NAD binding domain BMQ_RS19960 SM00316 Ribosomal protein S1-like RNA-binding domain BMQ_RS19960 SM00322 K homology RNA-binding domain BMQ_RS19965 SM01387 BMQ_RS19965 BMQ_RS19970 SM00904 Riboflavin kinase BMQ_RS20005 SM00316 Ribosomal protein S1-like RNA-binding domain BMQ_RS20005 SM00322 K homology RNA-binding domain BMQ_RS20015 SM00479 BMQ_RS20015 BMQ_RS20015 SM00481 DNA polymerase alpha chain like domain BMQ_RS20025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMQ_RS20080 SM00260 Two component signalling adaptor domain BMQ_RS20085 SM00073 Histidine Phosphotransfer domain BMQ_RS20085 SM00260 Two component signalling adaptor domain BMQ_RS20085 SM00387 Histidine kinase-like ATPases BMQ_RS20085 SM01231 BMQ_RS20085 BMQ_RS20090 SM00448 cheY-homologous receiver domain BMQ_RS20100 SM00382 ATPases associated with a variety of cellular activities BMQ_RS20100 SM00962 SRP54-type protein, GTPase domain BMQ_RS20135 SM00448 cheY-homologous receiver domain BMQ_RS20185 SM00382 ATPases associated with a variety of cellular activities BMQ_RS20225 SM00382 ATPases associated with a variety of cellular activities BMQ_RS20225 SM01086 C-terminal, D2-small domain, of ClpB protein BMQ_RS20245 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BMQ_RS20245 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMQ_RS20245 SM00493 BMQ_RS20245 BMQ_RS20255 SM00881 CoA binding domain BMQ_RS20310 SM00382 ATPases associated with a variety of cellular activities BMQ_RS20310 SM00962 SRP54-type protein, GTPase domain BMQ_RS20310 SM00963 SRP54-type protein, helical bundle domain BMQ_RS20320 SM00382 ATPases associated with a variety of cellular activities BMQ_RS20320 SM00962 SRP54-type protein, GTPase domain BMQ_RS20320 SM00963 SRP54-type protein, helical bundle domain BMQ_RS20325 SM00968 SMC proteins Flexible Hinge Domain BMQ_RS20330 SM00358 Double-stranded RNA binding motif BMQ_RS20330 SM00535 Ribonuclease III family BMQ_RS20340 SM00822 BMQ_RS20340 BMQ_RS20345 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BMQ_RS20360 SM00487 DEAD-like helicases superfamily BMQ_RS20360 SM00490 helicase superfamily c-terminal domain BMQ_RS20380 SM01120 BMQ_RS20380 BMQ_RS20380 SM01121 BMQ_RS20380 BMQ_RS20400 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BMQ_RS20415 SM00220 Serine/Threonine protein kinases, catalytic domain BMQ_RS20415 SM00740 BMQ_RS20415 BMQ_RS20420 SM00331 Sigma factor PP2C-like phosphatases BMQ_RS20420 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BMQ_RS20445 SM00487 DEAD-like helicases superfamily BMQ_RS20445 SM00490 helicase superfamily c-terminal domain BMQ_RS20455 SM01409 BMQ_RS20455 BMQ_RS20460 SM00072 Guanylate kinase homologues. BMQ_RS20475 SM00831 Cation transporter/ATPase, N-terminus BMQ_RS20490 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BMQ_RS20505 SM00851 MGS-like domain BMQ_RS20505 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BMQ_RS20505 SM01209 BMQ_RS20505 BMQ_RS20510 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BMQ_RS20535 SM00363 S4 RNA-binding domain BMQ_RS20560 SM00363 S4 RNA-binding domain BMQ_RS20605 SM00864 Tubulin/FtsZ family, GTPase domain BMQ_RS20605 SM00865 Tubulin/FtsZ family, C-terminal domain BMQ_RS20610 SM00842 Cell division protein FtsA BMQ_RS20645 SM00740 BMQ_RS20645 BMQ_RS20650 SM00740 BMQ_RS20650 BMQ_RS20690 SM00878 Biotin carboxylase C-terminal domain BMQ_RS20725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMQ_RS20810 SM00914 BMQ_RS20810 BMQ_RS20815 SM00028 Tetratricopeptide repeats BMQ_RS20875 SM00138 Methyltransferase, chemotaxis proteins BMQ_RS20880 SM00562 BMQ_RS20880 BMQ_RS20910 SM00411 bacterial (prokaryotic) histone like domain BMQ_RS20950 SM01240 BMQ_RS20950 BMQ_RS20955 SM00316 Ribosomal protein S1-like RNA-binding domain BMQ_RS20960 SM00563 Phosphate acyltransferases BMQ_RS20990 SM00870 BMQ_RS20990 BMQ_RS21000 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMQ_RS21010 SM00422 helix_turn_helix, mercury resistance BMQ_RS21035 SM00487 DEAD-like helicases superfamily BMQ_RS21035 SM00490 helicase superfamily c-terminal domain BMQ_RS21060 SM00257 Lysin motif BMQ_RS21065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS21065 SM00387 Histidine kinase-like ATPases BMQ_RS21065 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS21070 SM00448 cheY-homologous receiver domain BMQ_RS21070 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS21090 SM00363 S4 RNA-binding domain BMQ_RS21185 SM00387 Histidine kinase-like ATPases BMQ_RS21195 SM00936 Penicillin-binding protein 5, C-terminal domain BMQ_RS21250 SM00882 Coenzyme A transferase BMQ_RS21255 SM00882 Coenzyme A transferase BMQ_RS21280 SM00704 CDGSH-type zinc finger. Function unknown. BMQ_RS21290 SM00849 Metallo-beta-lactamase superfamily BMQ_RS21375 SM00382 ATPases associated with a variety of cellular activities BMQ_RS21385 SM00062 Bacterial periplasmic substrate-binding proteins BMQ_RS21385 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BMQ_RS21415 SM00861 Transketolase, pyrimidine binding domain BMQ_RS21435 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMQ_RS21445 SM00091 PAS domain BMQ_RS21445 SM00382 ATPases associated with a variety of cellular activities BMQ_RS21465 SM00448 cheY-homologous receiver domain BMQ_RS21470 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMQ_RS21485 SM00363 S4 RNA-binding domain BMQ_RS21490 SM00861 Transketolase, pyrimidine binding domain BMQ_RS21520 SM00878 Biotin carboxylase C-terminal domain BMQ_RS21565 SM00382 ATPases associated with a variety of cellular activities BMQ_RS21575 SM00841 Elongation factor P, C-terminal BMQ_RS21575 SM01185 BMQ_RS21575 BMQ_RS21610 SM00529 Helix-turn-helix diphteria tox regulatory element BMQ_RS21630 SM00450 Rhodanese Homology Domain BMQ_RS21650 SM00487 DEAD-like helicases superfamily BMQ_RS21650 SM00490 helicase superfamily c-terminal domain BMQ_RS21695 SM00382 ATPases associated with a variety of cellular activities BMQ_RS21710 SM00849 Metallo-beta-lactamase superfamily BMQ_RS21720 SM00631 BMQ_RS21720 BMQ_RS21735 SM00028 Tetratricopeptide repeats BMQ_RS21775 SM00382 ATPases associated with a variety of cellular activities BMQ_RS21865 SM00382 ATPases associated with a variety of cellular activities BMQ_RS21875 SM00518 AP endonuclease family 2 BMQ_RS21880 SM00487 DEAD-like helicases superfamily BMQ_RS21880 SM00490 helicase superfamily c-terminal domain BMQ_RS21920 SM00400 zinc finger BMQ_RS21920 SM00493 BMQ_RS21920 BMQ_RS21935 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS21965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMQ_RS21970 SM00322 K homology RNA-binding domain BMQ_RS21990 SM00244 prohibitin homologues BMQ_RS22010 SM00729 Elongator protein 3, MiaB family, Radical SAM BMQ_RS22025 SM00271 DnaJ molecular chaperone homology domain BMQ_RS22045 SM00729 Elongator protein 3, MiaB family, Radical SAM BMQ_RS22050 SM00838 Elongation factor G C-terminus BMQ_RS22080 SM00849 Metallo-beta-lactamase superfamily BMQ_RS22090 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMQ_RS22110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMQ_RS22120 SM01103 BMQ_RS22120 BMQ_RS22210 SM00382 ATPases associated with a variety of cellular activities BMQ_RS22240 SM00732 Likely ribonuclease with RNase H fold. BMQ_RS22250 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMQ_RS22265 SM00382 ATPases associated with a variety of cellular activities BMQ_RS22270 SM00028 Tetratricopeptide repeats BMQ_RS22290 SM00382 ATPases associated with a variety of cellular activities BMQ_RS22330 SM00287 Bacterial SH3 domain homologues BMQ_RS22330 SM00646 BMQ_RS22330 BMQ_RS22340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMQ_RS22340 SM00954 Region found in RelA / SpoT proteins BMQ_RS22380 SM01323 BMQ_RS22380 BMQ_RS22400 SM00382 ATPases associated with a variety of cellular activities BMQ_RS22405 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMQ_RS22430 SM00257 Lysin motif BMQ_RS22475 SM01317 BMQ_RS22475 BMQ_RS22495 SM00316 Ribosomal protein S1-like RNA-binding domain BMQ_RS22585 SM00257 Lysin motif BMQ_RS22595 SM01004 Delta-aminolevulinic acid dehydratase BMQ_RS22630 SM00382 ATPases associated with a variety of cellular activities BMQ_RS22630 SM00464 Found in ATP-dependent protease La (LON) BMQ_RS22635 SM00382 ATPases associated with a variety of cellular activities BMQ_RS22640 SM00382 ATPases associated with a variety of cellular activities BMQ_RS22640 SM00994 ClpX C4-type zinc finger BMQ_RS22640 SM01086 C-terminal, D2-small domain, of ClpB protein BMQ_RS22665 SM01329 BMQ_RS22665 BMQ_RS22670 SM00917 LeuA allosteric (dimerisation) domain BMQ_RS22710 SM00909 Sporulation and spore germination BMQ_RS22720 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS22765 SM00062 Bacterial periplasmic substrate-binding proteins BMQ_RS22770 SM00382 ATPases associated with a variety of cellular activities BMQ_RS22790 SM00421 helix_turn_helix, Lux Regulon BMQ_RS22825 SM00465 GIY-YIG type nucleases (URI domain) BMQ_RS22835 SM00893 Electron transfer flavoprotein domain BMQ_RS22840 SM00893 Electron transfer flavoprotein domain BMQ_RS22870 SM00463 Small MutS-related domain BMQ_RS22870 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BMQ_RS22870 SM00534 ATPase domain of DNA mismatch repair MUTS family BMQ_RS22875 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMQ_RS22875 SM00481 DNA polymerase alpha chain like domain BMQ_RS22875 SM00483 DNA polymerase X family BMQ_RS22895 SM00873 B3/4 domain BMQ_RS22895 SM00874 tRNA synthetase B5 domain BMQ_RS22895 SM00896 Ferredoxin-fold anticodon binding domain BMQ_RS22905 SM00967 RNA 2'-O ribose methyltransferase substrate binding BMQ_RS22950 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMQ_RS22990 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMQ_RS23005 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BMQ_RS23005 SM01232 BMQ_RS23005 BMQ_RS23010 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BMQ_RS23010 SM00474 3'-5' exonuclease BMQ_RS23010 SM00475 5'-3' exonuclease BMQ_RS23010 SM00482 DNA polymerase A domain BMQ_RS23015 SM00091 PAS domain BMQ_RS23015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS23015 SM00387 Histidine kinase-like ATPases BMQ_RS23015 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS23020 SM00448 cheY-homologous receiver domain BMQ_RS23020 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS23035 SM01329 BMQ_RS23035 BMQ_RS23075 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMQ_RS23080 SM00919 Malic enzyme, NAD binding domain BMQ_RS23080 SM01274 BMQ_RS23080 BMQ_RS23085 SM00481 DNA polymerase alpha chain like domain BMQ_RS23110 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS23120 SM00849 Metallo-beta-lactamase superfamily BMQ_RS23125 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BMQ_RS23125 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BMQ_RS23200 SM00981 BMQ_RS23200 BMQ_RS23225 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMQ_RS23230 SM00363 S4 RNA-binding domain BMQ_RS23230 SM01390 BMQ_RS23230 BMQ_RS23235 SM00363 S4 RNA-binding domain BMQ_RS23250 SM00116 Domain in cystathionine beta-synthase and other proteins. BMQ_RS23270 SM00354 helix_turn _helix lactose operon repressor BMQ_RS23275 SM00830 Chorismate mutase type II BMQ_RS23310 SM00382 ATPases associated with a variety of cellular activities BMQ_RS23310 SM00843 BMQ_RS23310 BMQ_RS23345 SM00849 Metallo-beta-lactamase superfamily BMQ_RS23365 SM00642 Alpha-amylase domain BMQ_RS23390 SM00420 helix_turn_helix, Deoxyribose operon repressor BMQ_RS23395 SM00363 S4 RNA-binding domain BMQ_RS23415 SM00450 Rhodanese Homology Domain BMQ_RS23450 SM00729 Elongator protein 3, MiaB family, Radical SAM BMQ_RS23475 SM00014 Acid phosphatase homologues BMQ_RS23510 SM00382 ATPases associated with a variety of cellular activities BMQ_RS23545 SM00947 Carbonic anhydrase BMQ_RS23550 SM00833 Cobalamin synthesis protein cobW C-terminal domain BMQ_RS23605 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMQ_RS23665 SM00642 Alpha-amylase domain BMQ_RS23910 SM00316 Ribosomal protein S1-like RNA-binding domain BMQ_RS23920 SM00344 helix_turn_helix ASNC type BMQ_RS23945 SM01298 BMQ_RS23945 BMQ_RS23950 SM00479 BMQ_RS23950 BMQ_RS23965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMQ_RS24105 SM00729 Elongator protein 3, MiaB family, Radical SAM BMQ_RS24155 SM00382 ATPases associated with a variety of cellular activities BMQ_RS24175 SM00382 ATPases associated with a variety of cellular activities BMQ_RS24175 SM00930 BMQ_RS24175 BMQ_RS24185 SM00493 BMQ_RS24185 BMQ_RS24235 SM00382 ATPases associated with a variety of cellular activities BMQ_RS24285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS24285 SM00387 Histidine kinase-like ATPases BMQ_RS24285 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS24290 SM00448 cheY-homologous receiver domain BMQ_RS24290 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS24300 SM00014 Acid phosphatase homologues BMQ_RS24305 SM00347 helix_turn_helix multiple antibiotic resistance protein BMQ_RS24330 SM00852 Probable molybdopterin binding domain BMQ_RS24345 SM00729 Elongator protein 3, MiaB family, Radical SAM BMQ_RS24360 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BMQ_RS24360 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BMQ_RS24385 SM00316 Ribosomal protein S1-like RNA-binding domain BMQ_RS24385 SM00357 Cold shock protein domain BMQ_RS24385 SM00955 BMQ_RS24385 BMQ_RS24400 SM01192 BMQ_RS24400 BMQ_RS24400 SM01193 BMQ_RS24400 BMQ_RS24420 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMQ_RS24485 SM00028 Tetratricopeptide repeats BMQ_RS24570 SM00382 ATPases associated with a variety of cellular activities BMQ_RS24575 SM00487 DEAD-like helicases superfamily BMQ_RS24575 SM00490 helicase superfamily c-terminal domain BMQ_RS24580 SM00091 PAS domain BMQ_RS24580 SM00382 ATPases associated with a variety of cellular activities BMQ_RS24600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMQ_RS24605 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMQ_RS24605 SM00245 tail specific protease BMQ_RS24620 SM00382 ATPases associated with a variety of cellular activities BMQ_RS24650 SM00937 BMQ_RS24650 BMQ_RS24655 SM00957 SecA DEAD-like domain BMQ_RS24655 SM00958 SecA preprotein cross-linking domain BMQ_RS24755 SM00487 DEAD-like helicases superfamily BMQ_RS24755 SM00490 helicase superfamily c-terminal domain BMQ_RS24775 SM00421 helix_turn_helix, Lux Regulon BMQ_RS24775 SM00448 cheY-homologous receiver domain BMQ_RS24780 SM00387 Histidine kinase-like ATPases BMQ_RS24805 SM00244 prohibitin homologues BMQ_RS24815 SM00984 UDP binding domain BMQ_RS24830 SM00487 DEAD-like helicases superfamily BMQ_RS24830 SM00490 helicase superfamily c-terminal domain BMQ_RS24835 SM00257 Lysin motif BMQ_RS24855 SM00530 Helix-turn-helix XRE-family like proteins BMQ_RS24915 SM00382 ATPases associated with a variety of cellular activities BMQ_RS24990 SM00226 Low molecular weight phosphatase family BMQ_RS25020 SM00937 BMQ_RS25020 BMQ_RS25035 SM00357 Cold shock protein domain BMQ_RS25035 SM00382 ATPases associated with a variety of cellular activities BMQ_RS25035 SM00959 Rho termination factor, N-terminal domain BMQ_RS25055 SM00448 cheY-homologous receiver domain BMQ_RS25110 SM00155 Phospholipase D. Active site motifs. BMQ_RS25120 SM00836 DALR anticodon binding domain BMQ_RS25120 SM01016 Arginyl tRNA synthetase N terminal dom BMQ_RS25165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMQ_RS25215 SM00986 Uracil DNA glycosylase superfamily BMQ_RS25215 SM00987 UreE urease accessory protein, C-terminal domain BMQ_RS25230 SM01350 BMQ_RS25230 BMQ_RS25240 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BMQ_RS25240 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BMQ_RS25315 SM00382 ATPases associated with a variety of cellular activities BMQ_RS25320 SM00382 ATPases associated with a variety of cellular activities BMQ_RS25345 SM00354 helix_turn _helix lactose operon repressor BMQ_RS25375 SM01060 BMQ_RS25375 BMQ_RS25380 SM00642 Alpha-amylase domain BMQ_RS25390 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BMQ_RS25400 SM00448 cheY-homologous receiver domain BMQ_RS25400 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS25405 SM00387 Histidine kinase-like ATPases BMQ_RS25405 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS25430 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMQ_RS25435 SM00849 Metallo-beta-lactamase superfamily BMQ_RS25450 SM00091 PAS domain BMQ_RS25450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMQ_RS25450 SM00387 Histidine kinase-like ATPases BMQ_RS25450 SM00388 His Kinase A (phosphoacceptor) domain BMQ_RS25455 SM00448 cheY-homologous receiver domain BMQ_RS25455 SM00862 Transcriptional regulatory protein, C terminal BMQ_RS25480 SM00788 Adenylosuccinate synthetase BMQ_RS25495 SM00267 diguanylate cyclase BMQ_RS25545 SM00470 ParB-like nuclease domain BMQ_RS25555 SM00470 ParB-like nuclease domain BMQ_RS25565 SM01228 BMQ_RS25565 BMQ_RS25575 SM00393 Putative single-stranded nucleic acids-binding domain BMQ_RS25575 SM01245 BMQ_RS25575 BMQ_RS25630 SM00387 Histidine kinase-like ATPases BMQ_RS25685 SM00480 DNA polymerase III beta subunit BMQ_RS25700 SM00433 TopoisomeraseII BMQ_RS26230 SM00936 Penicillin-binding protein 5, C-terminal domain BMQ_RS26485 SM00480 DNA polymerase III beta subunit BMQ_RS26735 SM01400 BMQ_RS26735 BMQ_RS26765 SM00487 DEAD-like helicases superfamily BMQ_RS26765 SM00490 helicase superfamily c-terminal domain BMQ_RS26820 SM00977 TilS substrate C-terminal domain BMQ_RS26905 SM00382 ATPases associated with a variety of cellular activities BMQ_RS26905 SM00760 Bacterial dnaA protein helix-turn-helix domain BMQ_RS27210 SM00487 DEAD-like helicases superfamily BMQ_RS27210 SM01058 CarD-like/TRCF domain BMQ_RS27505 SM00663 RNA polymerase I subunit A N-terminus BMQ_RS27715 SM00382 ATPases associated with a variety of cellular activities BMQ_RS27735 SM00257 Lysin motif