        rlbA NONE
        recF NONE
        remB NONE
        gyrB    6591 ..    6616 + -10.6  -5.26316   ATCTAATAATAAAAA         GCCTTATTTC CAATTA GAAATAAGGC          TTTTTTCTGAACTGG 100 35
        gyrA    9272 ..    9292 + -10.4  -5.36441   AAAGTTAAAGAAAAA            GCGCGGCT ATACC AGCTGCGC            TTTTTTATATCAAAA 100 33
HC660_RS00040   11175 ..   11187 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 95
HC660_RS00045 NONE
HC660_RS00050   11428 ..   11438 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  69 85
HC660_RS00055   14410 ..   14427 +  -8.5   -4.0031   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTGTTTGGTGGCGAT  77 55
         rrf   14557 ..   14575 + -14.6  -5.72622   CAAGCAAGGGTAAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTATACA 100 36
        guaB   17147 ..   17171 +  -9.3   -5.9873   ACAAATTAAAAACAT          TTGACAGGGTC TCT GACTCTGTCTA          TTTTTTTTATACTGA 100 51
HC660_RS00075   18613 ..   18647 +  -7.3  -3.29471   CTGGTTTTAATGAAT    G-GAAAGAGCTCTGAT TAAT GTTAGGGCTCTTTCGC     TTAATATACTGAAAA  64 31
        pdxS NONE
        pdxT   20548 ..   20580 + -14.2  -5.48213   AGGGTGGCAACGCGA      GAGCTCTCGTCCCT TTCAT GGGGATGAGGGCTC      TTTTTATTTTCGATA 100 274
        serS   21910 ..   21946 + -16.8  -3.46068   TCATCAAAGCGTAAT   GCTGAAAAGGTGTGCCT GATA AGGCACGCCTTTTC-GC    TATTTAAATTGAACA 100 27
HC660_RS00095   22184 ..   22206 + -12.1  -5.23316   TTGGAGATTGTTTTG           TCCGTTGCA CCGTT TGCAACGGA           TTTTTTAATATCATA 100 76
HC660_RS00120   26146 ..   26156 +    -4  -2.95598   TCGTCATAGATGCGA                 CAAA AAA TTTG                 ATATTTATTTTGCCG  47 85
         ffs   26458 ..   26477 + -10.8  -5.60689   CATCAAATTTTCAAA            CTCACCTA ATAT TAGGTGAG             TTTTTTGTTATGTAA 100 50
        dnaX NONE
HC660_RS00135 NONE
        recR NONE
HC660_RS00145 NONE
        bofA   30017 ..   30033 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  50 255
HC660_RS00155   31656 ..   31668 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 95
HC660_RS00160 NONE
HC660_RS00165   31909 ..   31919 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  69 85
HC660_RS00170   34891 ..   34908 +  -8.5   -4.0031   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTGTTTGGTGGCGAT  77 54
         rrf   35038 ..   35056 + -14.6  -5.72622   CAAGCAAGGGTAAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTGTCCA 100 36
HC660_RS00180   35402 ..   35415 +  -6.7  -5.63504   GCCATTATACTCTTA               GACCT GAGA AGGTC                TTTTTTTGTACCATT  90 25
HC660_RS00185 NONE
HC660_RS00190   37348 ..   37359 +    -3  -3.54475   AGTTTACCAGTAAGA                CTTA GCTT TAAG                 TTCTGTCATAGGAAC  47 39
HC660_RS00195 NONE
HC660_RS00200   39473 ..   39487 +  -2.9   -3.3862   GTTATCAATGAAGCG               TTGAA AAAAA TTCAA               TTGTGACCTGTTTCT  47 5
        darA   39875 ..   39891 +  -3.7  -4.17089   TATTTGTCCTTCCAG              TCGATGA ATT TCATCAA              TTTTAAGGATTTGAA  59 3
HC660_RS00210 NONE
        holB NONE
        ricT NONE
        yabA   42563 ..   42585 + -10.6  -4.58663   AAAAATAAGGAAAAA           GGCTTCCG CATCAGA CGGAAGCC           TTTTTCAAAGGTGCT  89 33
HC660_RS00235 NONE
        rsmI   44506 ..   44529 +  -9.7  -5.36441   CAGCAATAAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTGTAAAAA 100 32
        metG   47338 ..   47379 + -10.3  -3.34398   TTAAATAATGATAAA CAAAAGGTGTTTCACGTGT AACA ATTCGTCGAACACCTTTTG  TGTTTCGACAAGAAA  79 33
HC660_RS00255   48248 ..   48266 +  -3.8  -3.86524   TGTTCTACATGCTTT             CTTCTCCT CAT AGGATAGG             TTTGTCGACAAGTCT  55 97
HC660_RS00260   49662 ..   49682 +    -9  -5.68023   ATATACTTATCTATA            CAGAGGGT TTTGC GCCCTCTG            TTTTTTTCGTTATAA 100 42
        rnmV NONE
        rsmA   51210 ..   51227 +  -9.9  -5.45802   AACGGATTGTACAAA             GCCCTTT TCTA AAAGGGC              TTTTTGTTTTCGCAC 100 14
        prtG   52255 ..   52279 + -11.5  -5.48213   TATAAGTCCAATTAG          CCCCGGATAGA TGA TTTATTCGGGG          TTTTTATTTTACATA 100 26
HC660_RS00280   52720 ..   52742 +  -8.5  -5.60556   GTAGCATTTTAACGG           GCAGTGAAC TTTTT GTTTACTGC           TTTTTGTTTTGTCTT 100 29
HC660_RS00285   53073 ..   53095 + -12.7  -5.13016   GATAAGGAATGTGAC           CCGGGGGAC GTATG GTTCCCCGG           TTTTTGATTTTGGTT 100 36
HC660_RS00290 NONE
        purR NONE
HC660_RS00300   55375 ..   55400 + -10.5  -5.29385   AAAATAATAAGAAAA         GTGATTCTGGG TTTG CTCGGAATCAC          TTTTTTAATTACCTT 100 34
       spoVG   55886 ..   55899 +  -3.8  -4.57569   AAGGACTGCTGATGG               GGCT GAGACA AGCC                TTTTTCCGGCAGTCC  66 57
        glmU NONE
HC660_RS00315   58399 ..   58417 +  -3.2  -4.21402   TTCAGCTAAACCGAT             GTTTTAAA AGG TTTAAACC             TTTATCGTTTTGGGT  60 32
HC660_RS00320   59105 ..   59129 +  -7.9  -4.46926   TCAATAATAGCTTAA          GGCGTAACC CTCCCGC GGTTACGTC          TTTTGTGCTAGAATG  80 34
HC660_RS00325 NONE
HC660_RS00330   60062 ..   60090 +  -8.9   -5.2015   ATTTATTCAATAAAA        AGCTTTGGTGTAG ACA CTAGACCAAAGCG        TTTTTCTGTTCTTAC 100 28
         mfd   63680 ..   63690 +    -4  -3.83205   TTTGTTACTCTCTGG                 TGTA TAT TACA                 TTTGATGTGACGGAT  55 43
       spoVT   64368 ..   64393 +  -9.1  -5.24129   AAATAGGTATAGAAA         GAACAGC-TCTC CTT GGGACGCTGTTC         TTTTTTGTGCAGGCC 100 58
HC660_RS00345 NONE
        mazG NONE
HC660_RS00355 NONE
        yabP NONE
        yabQ NONE
       divIC   69255 ..   69272 +  -3.5  -2.90075   GTAGCCTTGTTGACA             CTTAAAT TTTT ATTTAGG              TATAATTAAGCAAAC  45 37
HC660_RS00375   69737 ..   69760 +  -8.9  -5.74122   CTATAAATAAATGAA          GCATCCGTT CTTCCC AACGGGTGC           TTTTTTTATATGCTC 100 52
HC660_RS00380 NONE
HC660_RS00385   70045 ..   70067 + -12.8  -5.85011   GGGTCATACTGAAAA           TCGGTTTCTG TTA CAGAAGCCGA           TTTTTTTCATTTTTA 100 32
      spoIIE   72763 ..   72777 +  -2.8  -2.80074   GAAGATGGAACTATA               TGAATC TGA GAATCA               TCGTATTCTCCAGGA  42 71
HC660_RS00395 NONE
HC660_RS00400   74586 ..   74597 +    -3  -3.61356   GATTGAAAGTGATAG                GATA TGAA TATC                 TTTAAAATACCTGCT  49 84
        tilS   76044 ..   76059 +  -3.3  -3.03338   AGGGGGCAAGCATAA              TCATG ATGAAA CATGA               TATTGAAACAGTTCT  45 26
         hpt NONE
        ftsH   78616 ..   78635 + -11.4  -5.72616   GCTTTCTGATAAAAA            CTGCCGGC TGAC GCTGGCAG             TTTTTTTATGTGAAT 100 42
HC660_RS00420 NONE
        hslO   80443 ..   80463 + -11.9  -5.22039   TTCGAGACCAAACGA            CCCGCTAAG CTC TTTAGCGGG            TTTTTTGAATTTAAG 100 18
HC660_RS00430 NONE
        cysK   82408 ..   82424 + -13.7  -6.02919   AAAAAATCCGACAAA              CTCCCGG TGC CCGGGAG              TTTTTTTATTTGTGC 100 39
HC660_RS00440 NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
HC660_RS00470 NONE
        dusB   88348 ..   88368 +    -9  -5.14894   TCTATTTGCTGCTCA            CTGCCAGT TTTAT GCTGGCAG            TTTTTCTGCTTTTTT  91 49
        lysS   89923 ..   89956 + -13.3  -4.59117   AGCGCTAATGTTAAA     GAGCGTCAACCTTGCT AAT AG-AAGGATGACGCTC     TTTTATAATTCCTTT 100 33
HC660_RS00485   91840 ..   91865 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC660_RS00490   94903 ..   94920 +  -8.5   -4.0031   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTGTTTGGTGGCGAT  77 54
         rrf   95042 ..   95057 +  -7.6  -3.31322   GACGCCGCCAAGCAA              TTGCAC GTTA GTGCAA               TTATGGAGGATTAGC  67 28
HC660_RS00500 NONE
HC660_RS00505   95220 ..   95232 +  -3.5  -3.09648   TTGCCGGCACCACTT                TTATA TGA TATAA                TATTCAAGTCTCTTG  46 29
HC660_RS00510 NONE
HC660_RS00515   95427 ..   95454 +  -3.5  -2.87564   CACCCGCATTATATA        GGATG-ACAGTT ATAAA AACTGGACATCC        TGTCTGCGGAAGTAG  44 33
HC660_RS00520 NONE
HC660_RS00525   95624 ..   95634 +  -2.4  -3.60151   TGCCGGTTCAAGTCC                 GGCC CTC GGCA                 TTATCATTTGCGCCC  48 15
HC660_RS00530 NONE
HC660_RS00535 NONE
HC660_RS00540   96061 ..   96077 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  50 183
HC660_RS00545   97693 ..   97718 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC660_RS00550  100757 ..  100774 +  -8.5   -4.0031   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTGTTTGGTGGCGAT  77 54
         rrf  100905 ..  100926 + -14.5  -4.78752   AAGCAATTAATAAAA           GGACAGCTC ATAT GAGCTGTCC            TTTTTGCGTTCTCCT 100 37
        ctsR NONE
        mcsA NONE
HC660_RS00570 NONE
HC660_RS00575  105709 ..  105739 +  -9.9  -2.89602   TATAGAAGACGAAAA       TGAGGCATACA GCATGTAAG TGTATGCCTCA       ATTTCGTATCAAGAA  75 41
        radA NONE
        disA  108243 ..  108265 +  -2.1   -2.7317   ATTTAGACAGACAGC           TATGATTTT CGGTT AAAACCATA           TCATTACGGGTATAT  41 21
HC660_RS00590 NONE
HC660_RS00595 NONE
HC660_RS00600 NONE
HC660_RS00605  112412 ..  112442 + -12.7  -5.85737   AACCGCGCGGTTAAA      GCGTCTCTGTCATG TTTA CATG-CAGAGGCGC       TTTTTTTATTGGTGT 100 248
        cysE NONE
        cysS NONE
HC660_RS00620 NONE
        rlmB NONE
        rae1  116226 ..  116250 +  -3.5  -5.26316   TTGAAAAATGGCGGA          GGGGCGACTTA GAT TAAGTTGACGC          TTTTTTGTCCAATAA  75 9
        sigH  117006 ..  117023 +  -2.1  -2.78672   TTCCGACTATGATAT             GTTACTTA AGA TAAG-AAC             TAATGTCTATTTAGA  41 70
        rpmG NONE
        secE  117464 ..  117476 +  -6.9  -5.56673   TATCACTTGCCAAAA                CCCGT TCA GCGGG                TTTTTTATTGTGGGT  93 73
        nusG NONE
        rplK  118740 ..  118769 + -13.7  -3.72027   AATTTGTTTCTTGTC       GGGTTGCGAGTTT TCAC AAGTTCGCAACCC        TTATTCGTGGGAGGT 100 39
        rplA  119672 ..  119692 + -15.5   -4.9792   ATGCTTGTATATACA            GCCTCCATG TCT CATGGAGGC            TTTTTATATGGAATC 100 178
HC660_RS00665 NONE
        rplL  120711 ..  120731 +  -7.5  -5.29846   TTGCCTGTAGGGGAA            GCTCGCTTT TAT GAGGCGGGC            TTTTTCTTTGCCATT 100 48
HC660_RS00675  121520 ..  121540 +    -4   -5.8901   TTTGTTTTTGGATGT            GGTTTTCT TAATT AGAAACCC            TTTTTTCTTTTGTCT  93 161
        rpoB NONE
        rpoC  128880 ..  128921 + -18.4  -3.64822   TTGAATAACTGATAT TATG-CTGCTGAAAGACTG CAAAA CAGTCTTTCAGCAGTCATA TTTAAATAAAAAAAT 100 33
HC660_RS00690  129309 ..  129343 +  -3.7  -4.65666   TTATAACGTACTTTT     TGTTTTTGCGTGAGA TTTAT TCTTGTGTAAAGACA     TTGTTTTTTGCCTAT  66 35
        rpsL NONE
        rpsG NONE
        fusA  132523 ..  132540 +  -8.5   -3.2918   TTGTAAGATGAGGAA             GTGAAAG CTTT CTTTCAC              TTCCTATCACTCTAT  70 75
         tuf  133798 ..  133816 + -12.4  -6.37666   ATAGTATATTGAAAA             CGAGGCCC TTT GGGTCTCG             TTTTTTTTGTTTTAT 100 40
HC660_RS00715  134980 ..  135011 +    -5  -4.82901   GAGGTTGCTGACACA      CCCGGCCGCTTTGC CATG GCAAGGTGTTCAGG       TTTTTCTCACGGAGA  72 200
        rpsJ  135363 ..  135373 +  -2.6  -3.34962   GTGTCGATATTGAAA                 TTAA ACT TTAA                 TTCTAAAATATAGAA  46 15
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH  142052 ..  142063 +    -3  -2.83522   CAAGCTGGTGGAGAA                GTAT TAGC ATAC                 GTTTGGTAAAAAAGT  42 5
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY  145523 ..  145548 + -10.5  -3.33696   ATTTATGAAAAACTA         GAGGAAATGGA TTTA TCCATTCCCTC          TTAATTAAGAGAGGA  79 25
HC660_RS00830 NONE
         map  147232 ..  147242 +  -5.4  -4.26189   GACAAACGGAAAACT                 GAGA TTT TCTC                 TTTTGAAATTTGTCA  68 283
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK  148578 ..  148611 +  -5.4  -3.66666   CTAAACAATGGGGAA     TTTCGGATGGAATC TCATAT GATTCTATTCGAGG      TTTCGACGTTTTGAA  59 138
HC660_RS00865  149587 ..  149607 +  -4.7  -2.55002   CGCAAAGACGATTGA            CTAGTTTCC CTT GTGAACTAG            GATTTTCGTGTGTTT  49 26
        rplQ  150007 ..  150020 +  -3.9  -2.85346   ACGGAGCACCAATGG               CAATT ATCG AATTG                GTTTAATCACATATT  45 6
HC660_RS00875 NONE
HC660_RS00880 NONE
HC660_RS00885 NONE
        truA  153445 ..  153455 +    -4  -3.34398   AAAGTTATAAGATAT                 CATA TGG TATG                 TATTTCAACCCCACG  49 77
        rplM NONE
        rpsI  154420 ..  154442 +  -8.4  -6.37666   ATTTTACGTTTCAAA           GCTCTCAACT ATG GGTTGGGGGC           TTTTTTTTATTTTCT 100 40
HC660_RS00905  155865 ..  155876 +  -5.8  -5.52909   CACGTTCCTTCCCCC                GCAG AAAG CTGC                 TTTTTTTAGATGTTC  89 107
HC660_RS00910 NONE
        cwlD  157196 ..  157215 +  -6.4  -4.51699   TACAGAAAAAGGCGA            CCCTCC GGAGTAAA GGAGGG             TTTTCTCATGGTTCT  75 13
        salA  158438 ..  158455 +  -5.6  -5.24129   TGCTGCTGCTTTTTT             CAGTTC ATCTTC GAACTG              TTTTTTGTAAAGCGG  83 101
HC660_RS00930  159678 ..  159692 +  -2.1  -3.50588   TTTATTTTACCTCGG               CGGAT TTAGC ATCTG               TGTTTGCTATGAGAT  46 41
HC660_RS00940  162394 ..  162419 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC660_RS00945  165459 ..  165476 +  -8.5   -4.0031   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTGTTTGGTGGCGAT  77 54
         rrf  165587 ..  165597 +  -2.4  -4.76423   TGTGAGAGTAGGACG                 CCGC CAA GCAG                 TTTTATCTATTTCTA  64 17
HC660_RS00955  165696 ..  165744 +  -5.1  -3.09516   ATCGGTCGTAGGTTC GAATCCTACCTGCGGAGCCATTG CTT CCATAGCTCAGCAGGTAGAGCAC TTCCATGGTAAGGAA  52 6
HC660_RS00960  165817 ..  165838 +    -3  -5.80364   CATTACTCTTACCAA           GGTTTCTC AAAAAA GAGAAAGC            TTTTTTTATTGCGAT  85 50
HC660_RS00965  165939 ..  165949 +  -6.8  -3.06183   CGCTCCATTATTTCA                 TCCC AAC GGGA                 TTCGATACAAGTGAA  60 34
HC660_RS00970 NONE
HC660_RS00975 NONE
HC660_RS00980  166384 ..  166400 +  -2.3   -3.8709   CGCACAGCAATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  50 182
HC660_RS00985  168016 ..  168041 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC660_RS00990  171081 ..  171098 +  -8.5   -4.0031   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTGTTTGGTGGCGAT  77 54
         rrf  171391 ..  171407 +  -2.3   -3.8709   CGCACAGCAATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  50 199
HC660_RS01000  173023 ..  173048 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC660_RS01005  176088 ..  176105 +  -8.5   -4.0031   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTGTTTGGTGGCGAT  77 54
         rrf  176221 ..  176267 +  -7.5  -5.77988   GAGTAGGACGCCGCC AAGCAAGGT-AAAGACCAGTTC AACT GAACTGGTCTTTTATTTTGCCC TTTTTTTATATCTGT 100 22
HC660_RS01015  178325 ..  178347 +  -6.3  -5.37043   CATAAAAGTGTGAAA           GTCCAGATT GATGA GATCTGGGC           TTTTTTATATAACAT  85 36
HC660_RS01020  179387 ..  179406 +  -7.2   -5.1287   AAGGCATGAAAAAAA            CCGCTCATA TGA TA-GAGCGG            TTTTTTCCGTATAGC  85 32
HC660_RS01090 NONE
HC660_RS01095 NONE
HC660_RS01100 NONE
HC660_RS01105 NONE
HC660_RS01110  194438 ..  194460 + -10.7  -5.93252   GCTAGCCCAGTCACA           GACACCTTT GACCA AAAGGTGTC           TTTTTTCTTTTTGAA 100 28
        sigW NONE
        rsiW  195860 ..  195886 + -12.4  -5.11033   GACCCGAACGGAGAA         GAGTAAAGCGTG TGG TGCGCTTTACTC         TTTTTTAAGGTTCTC 100 20
        cdaA NONE
HC660_RS01130 NONE
HC660_RS01135  200018 ..  200062 +    -3   -4.1964   ATAAAACATGTAGGA GGGGACGATTGAAAGTC CCCTTGAAAAAT GACTTTCT-TCGTCTCC TTTTACAATCTTAGG  55 384
        glmS  201901 ..  201932 +  -8.8  -4.96848   GAATAATAAATGTTT      AACCCCTTTGGATA TGAT TGTCTAAAGGGGTG       TTTTTATGTCCAAAA  91 35
HC660_RS01155 NONE
HC660_RS01160  205043 ..  205053 +  -5.4  -3.35813   TAGCTCTTCAAAAAA                 CTTC GCA GAAG                 TTAGTTGAAGTGAAG  56 517
HC660_RS01165 NONE
HC660_RS01170  209412 ..  209423 +    -3  -3.20382   ATTTTAAACAGTTAT                CAAA TGGA TTTG                 TTACTCAATATAAAA  44 46
HC660_RS01175  210042 ..  210053 +    -3  -2.78384   TAGGGGAGAAAGCAG                TTCT AAGG AGAA                 TGTAATGGGCGCCAA  42 72
HC660_RS01180 NONE
HC660_RS01185  210849 ..  210873 +  -9.3  -5.45726   TTCGGAAAGATCTAA          CATCCGCTTTT GTT ACGAGCGGATG          TTTTTTTACAGTCTA 100 104
HC660_RS01190 NONE
HC660_RS01195  211580 ..  211599 +    -8  -4.58395   ACAGAGATATAAAAA            TAAACATC AATA GATGTTTA             TTTTTACGCCATACA  83 29
HC660_RS01200  212933 ..  212958 +  -9.7    -5.626   TATCGAAAGATCTAA         CATCCGCTCGT CAAT ACAAGCGGGTG          TTTTTTTATAAGCTG 100 98
HC660_RS01205 NONE
HC660_RS01210 NONE
HC660_RS01215  216020 ..  216032 +  -2.7  -3.61902   CTGCTATGTTTTTCT                TTCTT TCA GAGAA                TTATATATAATAGGA  49 43
HC660_RS01220  216681 ..  216694 +  -6.7  -2.79796   CTACAATGTCCAGCA               GCTGA GACA TCAGC                TGTAATGCCATCAGC  55 356
HC660_RS01235  219376 ..  219400 + -14.5  -5.61596   GCGTAAATTATTAGG          TAAGCTGTTCA TCG TGAACAGCTTA          TTTTTTTATGCCCAT 100 27
HC660_RS01240  221122 ..  221141 +  -7.2  -5.59502   AATAAACAGGAAAAA            GAGACATT GACT GATGTCTC             TTTTTTCATTTTTTG  93 36
HC660_RS01245 NONE
HC660_RS01250  221680 ..  221703 +   -11  -2.76265   GAGCATGACATTTAA          GAGCCCTGTG CGTT TGCAGGGCTC           ATTCATTTATGAAGT  78 26
HC660_RS01260  223926 ..  223979 +  -8.4  -5.55664   CAGCATTAGACGGAA AAGGTAAATATAAAAGCTCTCTTC CTTTTC GAAGAGAGCTTTTTTGATTACTTC TTTTTTTCATCGTAG 100 19
HC660_RS01270  226111 ..  226131 + -14.1  -5.31275   ATAAATGGAGAAAAA            CCTTGTGCT GAG AGCACAAGG            TTTTTTATAGTCAAC 100 37
HC660_RS01275  227950 ..  227973 + -12.6  -5.70829   AAATGATGAGAAAAA          GCATTGAATC CTAG GATTCAATGC           TTTTTTTGTAGTCTT 100 35
HC660_RS01290  230867 ..  230890 +  -5.4  -3.73402   ATATCGTTGACTATG          GCAACTATAA GTGA TTATAATTGC           TTTAATCAACGATAT  62 62
HC660_RS01295 NONE
HC660_RS01300  233101 ..  233130 + -10.1   -5.9667   TGTAAGTGAGAAAAA       GCATCTCTGGAGA GGGT TATTCAGAGATGC        TTTTTTTGTATTTTT 100 36
HC660_RS01315  235819 ..  235846 + -10.8   -5.4505   GTATTGGAATCATAA        GCTAAAATAAGG GTTT TCTTATTTTAGC         TTTTTTATTGCGAAA 100 26
        purT  237084 ..  237111 + -12.7  -5.67063   ATAGAAATGAAATGG        GCGGGCCTTGT CTTAAT ACATGGCCCGC         TTTTTTTATCATCAC 100 37
HC660_RS01325 NONE
HC660_RS01330  238528 ..  238559 +  -5.2  -5.85737   AGTCTTTAAAGAGTA      GACGGTTTTCCT TCAAGTTT AGGAAGAGCGTC       TTTTTTTATTAATCT 100 25
HC660_RS01335 NONE
        pssA NONE
HC660_RS01345 NONE
HC660_RS01350  241593 ..  241621 +  -3.8  -5.40072   ATGGAGAGTAAAGAA       GAGGAGCTCGC AAATGAAA GCG-GCGCCTC        TTTTTTTGAAGAAAG  79 30
HC660_RS01355  241924 ..  241941 +  -8.5  -5.60993   GAAAGGCTCTTAACG             GCTTCTA TCAG TAGAAGC              TTTTTTTATAACCGA 100 28
HC660_RS01360  243374 ..  243397 + -15.4  -4.70659   AGTGAGGAAAGAAGA          TCCCCTGTGT AAAC ACACAGGGGA           TTTTTACATATCGCA 100 36
HC660_RS01365  244493 ..  244505 +  -6.3  -4.40237   CTGGGCGGATGTGTT                CATCT TTG AGATG                TTTTCCTGTATGATA  72 159
HC660_RS01370  245551 ..  245575 +   -13  -5.49729   TGAATAATATGGAAA          GAACACCTCT TATGC AGAGGTGTTC          TTTTTTTACATGCTT 100 34
        gamR NONE
HC660_RS01395  250900 ..  250921 +    -8  -5.67283   GCAGTTTAACGAAAA           CAGCCGGA AAAATC TCTGGCTG            TTTTTTCTTTAACTT 100 32
HC660_RS01400  252202 ..  252233 + -14.6  -4.20084   GAAGTATGAGGATAG      AAAAAGAACCTGCC TTGG GGCAGGTTCTTTTA       TTTTGAATGGGTCAT 100 32
HC660_RS01425 NONE
HC660_RS01430  259779 ..  259798 +  -6.4  -5.60993   AAGTATGTGAAAAAA            CAGCCG GATACCAA CGGCTG             TTTTTTTATGCGGAA  90 31
        kdgD NONE
HC660_RS01440  262415 ..  262445 + -11.3  -2.57132   TGAAGCAATAAAAGT      GCT-GGAAAGAGGC GCTT GTCTCTTTCCAAGC       CTTATCACCAGCCAG  78 30
        gudP NONE
        gudD  265271 ..  265281 +  -2.6   -3.4072   TCGTGCGATAAGTTT                 TATT CTA AATA                 TTGTCATAACGAATA  47 30
HC660_RS01455  266047 ..  266078 +  -7.3   -3.6279   CAATAATTGTTGAAA      CAGCCGCAGTT GAAACGTAAG ATCTGCGGCTG       TTCTTGAACCGATTT  67 35
        garD  267847 ..  267883 + -13.1  -3.34013   GTACCCTTATATGGT    CATGAAAAGAGGGTGGC GAT GCTGCCCTCTTTTTTTG    TTCCTTAAAAACATC 100 209
        mphK  269159 ..  269183 +   -10  -5.28414   GGTGGTACCGCGAGA          CCCTCGTCCT TTGAT AGGATGGGGG          TTTTTGTGTTTCTTA 100 318
HC660_RS01470 NONE
HC660_RS01475 NONE
HC660_RS01480 NONE
HC660_RS01485 NONE
HC660_RS01490 NONE
HC660_RS01495  273649 ..  273681 + -15.7  -2.65068   CGGGAAGACGTTTTA      TAAAAGGCCGATGCT GTC AGCACCGGCCTTTTG      ATTATGAATCTGTTC 100 23
HC660_RS01505  274808 ..  274829 +  -8.7  -5.80003   TTTTTAGGGGCAGGA           CGCCGTTCG CATT TGAACGGTG            TTTTTTCTTTATTGG 100 34
HC660_RS01510  275644 ..  275673 +  -9.4  -5.86609   GACAGCCTTCCCGAA       CACTGAGTGATT ATGCAA AATCGCTCGGTG        TTTTTGTTTTTTTAA 100 43
        phoD NONE
       tatAD  277895 ..  277917 + -13.5  -4.91109   AGGCTGAGTGCTGAT           GAGGCAGAC GCATG GTCTGCCTC           TTTTTCTCATGAAAG 100 34
        tatC  278726 ..  278779 +  -8.2  -4.51847   ATTGTGCGGCCGTAA CAGCGGCGATCCTCAATGCTTTGACG ATCA TGTCCAGGC-T-GAGGCTCGGCGCTG TTTTGTCGATTGTTT  82 78
HC660_RS01535  280585 ..  280608 + -12.4  -4.92757   TATAGGCATAAAAAA          CCCCCTGACC TCAA GATCAGGGGG           TTTTCTTATTAATCA 100 99
HC660_RS01550  284035 ..  284052 +    -7  -4.97402   GAATATTAAAGAAAA             GAAGGC GGAAAA GCCTTC              TTTTTGTGCGTTTTC  83 32
HC660_RS01555  284846 ..  284876 + -17.2  -3.60151   AACTAATGAGAAACA       TAACCTTGAAGAAT CCT ATTCTTCAAGGTTA       TTCTGCTTTCAGCAC 100 35
HC660_RS01565  286589 ..  286613 + -15.9  -5.93252   TGACAAAACAAAAAA          CCTTGAAAAGC CAA GCTTTTCAAGG          TTTTTTATTTTTGGA 100 41
        natA NONE
HC660_RS01585  290344 ..  290362 +  -5.3  -5.05601   AATAAACTTGCAAAA             GGAGAGA TACAC TTTCTCC             TTTTTGTGTATGCTG  78 36
HC660_RS01590  291405 ..  291428 +   -14  -4.55446   TTTTTAAATAGAAAA          GGAAATAGCC CTGG GGCTATTTCC           TTTTGATGTTTATTC 100 30
HC660_RS01605  294337 ..  294367 +  -7.7  -5.00895   TCCTTAATAGAAAAG       GACCTTTCTTC ACTTTAAAA GAAGAAGGGTC       TTTTTATATAATAAA  86 123
HC660_RS01610  296192 ..  296202 +  -4.6  -3.57462   AGGAACAGGCCTGTC                 CTGC AGA GCGG                 TTTGAGAGTGCCATG  55 431
HC660_RS01620  297545 ..  297569 + -14.4  -5.70829   TTCCAATAAGTGATG          GCAGAGAACC GAAAA GGTTCTCTGC          TTTTTTTATGCTGTT 100 32
HC660_RS01625 NONE
HC660_RS01630  300143 ..  300161 +  -9.5  -4.67755   AGAATAAGAAGTCAA             CCCGGCG CAGTT TGCCGGG             TTTTTCAGTACATAT  88 34
HC660_RS01635  301307 ..  301332 + -14.1  -4.55295   GGATAAATAAAAAGA         TAGTGTGCGCC GGAG GGTGCACACTA          TTTCTTTGTGAGAAA 100 31
        znuC NONE
        znuB  302864 ..  302889 + -14.9  -5.61596   AGGTAAAAATAAAAA         GCAGTTTTTCC TTCA GGAAAAACTGC          TTTTTTTATAGAAAT 100 35
HC660_RS01655 NONE
HC660_RS01660 NONE
HC660_RS01665 NONE
HC660_RS01670  306829 ..  306850 +  -3.7   -5.4505   AATAAAACAAAACAA           GGAGGGA GTTTCATG TCCTTCC            TTTTTTGTTACAGAA  79 36
HC660_RS01675 NONE
HC660_RS01680 NONE
HC660_RS01685 NONE
HC660_RS01690 NONE
HC660_RS01695 NONE
HC660_RS01700  314012 ..  314036 + -16.5  -4.87291   CAGCAATAAAAAGAT          CCCCGCTTGTG AAT CATAAGCGGGG          TTTTTGATTGACATC 100 32
        niaP  315336 ..  315354 + -13.2  -4.65895   CTTGAATAAACAAAA             GCACCTCA TCA TGAGGTGC             TTTTTACATGGAAAC 100 32
HC660_RS01710 NONE
HC660_RS01715  317776 ..  317790 +  -2.8  -2.60813   AGTGAAGAAGAAAAG               CAGG GGGAATG CCTG               ATGTTTAAAAAAATC  41 10
HC660_RS01720  318673 ..  318708 + -14.2  -3.54459   GATCTGAAGAAATAA    TGAAGAAAGCAGCCTG TTCG CAGGCTGCTTTTTTGA     TTTAAGAAGCATTGG 100 26
HC660_RS01730  321430 ..  321452 + -13.4  -4.68846   GTATTAAACATTGCT           GCCCGCCG GCTTGTA CGGCGGGC           TTTTCATTTATTCGT 100 34
HC660_RS01735  322016 ..  322039 +  -6.1  -5.84381   AAAGGAGTCTAAGAA          GAAATCATC ATAGAG GATGGTTTC           TTTTTTTGTTCATAA 100 13
HC660_RS01740 NONE
HC660_RS01745  324796 ..  324818 + -16.4  -4.95957   GTTTAATAGAAAAAA           GCAGTACACC CAG GGTGTACTGC           TTTTTCATTAATTTG 100 35
HC660_RS01755  326926 ..  326942 +  -2.9  -3.32986   GGAGGAAGAGCTTGA              CCGGTTG AAA CAATAGG              TGATTTTTGTGCATA  46 10
HC660_RS01760 NONE
HC660_RS01765  328489 ..  328512 +    -3  -5.53991   ATAGTTCACGAGCTG          GCAGGGCGGT CTTT ATGTCCCTGC           TTTTTTTGATAAATC  80 37
HC660_RS01775  330591 ..  330614 +  -2.6  -4.33165   GTGCTATAGTTAATA          TGGATACATAA CAG TTATG-ATTCA          TTTTCATCGATTTAG  58 70
        nadE  331502 ..  331532 + -15.7  -4.37247   GTGGAAATAACATGA       TAAAAAGCCCACT CTCGT AGTGGGCTTTTTA       TTTATTGATTCCTTT 100 31
HC660_RS01795  333928 ..  333946 + -12.4  -5.97575   TCAGCCAATGTAAAA             GCCGTGCG GGA TGCACGGC             TTTTTTTTATCGCTT 100 28
HC660_RS01810  336373 ..  336391 +  -4.5  -5.60993   GACAGACGTGAAGAG             CCGCC GCATCATCG GGCGG             TTTTTTTCTGCAGAC  84 39
HC660_RS01815  337254 ..  337279 +  -2.5  -3.03474   CCCTCTCCATATTTC         GACAGGAAGTC CCCC GACTTTCTAAC          TATCTGATTGTGAGA  43 56
HC660_RS01820 NONE
        pruA  339899 ..  339925 +  -8.7   -3.7829   TAAAGCGGGACTAAA         TGGGCATCCTC CCTGC GGGGGTGTCCA         TTTCATCCATATACT  76 38
        putP  341438 ..  341476 + -16.2  -3.08211   GTCACAATAAAGATC   GAAAGGAGGAGGAAGGGG ATG TCCCTTTTTCCTCTTTTC   TCCTTTTAAGACCGT 100 31
        putR  342831 ..  342846 +  -7.6  -3.94853   GAAATAAAAAAGAAA              CCAGTA CTTG TACTGG               TTTCGTCTTCAATTA  74 34
HC660_RS01855  346742 ..  346758 + -10.9  -3.15078   TTCATAAATAAAAAA              GCCCTTT GGA AAAGGGC              TGTTCATCAGCTGTG  80 30
HC660_RS01885  357024 ..  357043 +   -10   -5.9663   GATGTTTGAATGGAA            GACACGCG ATTG TGCGTGTC             TTTTTTTTGCTGTTT 100 39
HC660_RS01890  358148 ..  358169 +  -9.5  -5.18355   GAAAGCTAAAAACGA           GTCCATATC ATTT GATATGGGC            TTTTTACTTTTTAAA 100 124
HC660_RS01900  359580 ..  359611 +  -9.7   -4.4388   ATATTATCAATCAAC      CCCCATTTTGGATA ATCTC TAT-CAAAATGGGG      TTTATTAATTTCTAT  89 154
HC660_RS01905 NONE
        zinU  362585 ..  362604 +   -10  -5.52384   AATTAATAGGAAAAA            GCCGTCTCC TGC GGAG-CGGC            TTTTTTTAATGAAAC 100 35
HC660_RS01935  365162 ..  365183 + -11.7  -5.26875   GACATTAGGCTTCAA           GCATCCAAT TGAG ATTGGATGC            TTTTTTGATTAAAGG 100 33
HC660_RS01940 NONE
HC660_RS01945  366023 ..  366034 +    -3  -3.53012   TGCAAAAGATTTTTT                TGAA TATA TTCA                 TTTAACGCGAGAGGA  47 9
HC660_RS01950  366815 ..  366825 +  -5.4  -3.91032   AAACGCGTTTCATAG                 CCTA TGA TAGG                 TTTATCAAATACTTC  63 56
HC660_RS01955  368296 ..  368318 + -13.5  -3.24146   AAATATATAAAGAGT           CCCTGAGAG TATTC CTCTCAGGG           CTTTTCATTAGACGG 100 31
        hxlR  373002 ..  373023 +  -2.2     -6.13   AAGGAATCGTTGTAA           GGCGCTCT CGGTTA AGGGTGTC            TTTTTTTTTGCCTGT 100 26
       srfAA NONE
       srfAB NONE
       srfAC NONE
       srfAD  399739 ..  399761 + -14.2  -5.21709   GTTCCTGATGAAGAA           GCGAACAGCG CTG TGCTGTTCGC           TTTTTTGATATAGAA 100 33
HC660_RS02010  401144 ..  401157 +  -8.1  -4.40173   TCTCATTAAATAAAA               GAGGG AACA CCCTC                TTTTAAGTTTGTCGT  83 89
HC660_RS02025  404352 ..  404363 +  -4.4  -4.49556   GGCCTTTGCCTTCCT                GCTT GATA AAGC                 TTTCTTTCATAGACC  69 229
HC660_RS02070  411567 ..  411586 +  -5.8  -2.73635   AACAAAAAGGAGGAG            CTTGATGA TGGC TTATCAAG             ATTTCAGAGAATTTC  54 21
HC660_RS02075 NONE
        bsdD NONE
HC660_RS02085  413704 ..  413734 +   -17  -4.46212   TTAAAACGATAAATG       AAAAAGCCTGACGC CAT GCGTCAGGCTTTTA       TTTTATAATGAAACA 100 29
HC660_RS02090  414618 ..  414650 + -11.4  -4.32177   AATGGATAGACGAAT      AAAAATCCCGCAGG GCTGA TCTGCGGGATTTTC      TTTATTATAGGATAC  93 24
HC660_RS02100  418175 ..  418194 +  -2.7  -5.16151   ATCGTCTGAACAAAA            GCGCCTC GCTCTA GGGGCTC             TTTTTGTTCGATTTA  70 32
HC660_RS02110 NONE
HC660_RS02115 NONE
HC660_RS02120  422591 ..  422620 +  -9.2    -5.252   AAGGGGGATATAGGT       TGCGCCCCTGTC TGCACT GGCAGAGGCGCG        TTTTTTATACGACTG 100 92
        yclJ NONE
HC660_RS02140  427083 ..  427112 + -14.3   -4.1337   CATTAAATCATGCAA       GGCGGCGGCATAT CATC AGATGCTGCCGCC        TTCTTTCTCATATCG 100 35
        rapC NONE
HC660_RS02150  428514 ..  428536 + -13.5  -4.77165   GACGTAAGAACCAGG           CCCCTTCTC AATAA GAGAAGGGG           TTTTCTTCTAAAGAA 100 34
        yclN NONE
        yclO NONE
        yclP NONE
HC660_RS02185  434374 ..  434399 + -11.2    -5.626   AAGTAAAACGAAAAA         GAGCCTCCGCT CTCAA AGCGG-GGCTC         TTTTTTTATAGGATC 100 35
HC660_RS02210  438404 ..  438420 +  -5.8  -5.71712   AGCGCTGGTAAAAAA              TCCCCT GAACA GGGGGA              TTTTTTTATGTCCCA 100 30
        gabT NONE
HC660_RS02225  442740 ..  442764 + -16.5  -5.19879   TGATATGCTCCTAAA          GAGGTGCCGGA AAA TCCGGTACCTC          TTTTTGTGTTTCAGC 100 47
        glcU NONE
HC660_RS02235  444522 ..  444546 + -14.4  -5.27335   GATAAATCAAAAAAA          GCGATCCAGA ACTCA TCTGGATCGC          TTTTTCTTTAGGCGC 100 36
HC660_RS02255  447926 ..  447945 +   -10  -5.61881   AGAGGAAAGAGAAAA            GGCTCCTG AAAC CAGGAGTC             TTTTTATTTTTAAAA 100 17
HC660_RS02260 NONE
HC660_RS02265 NONE
HC660_RS02270  451119 ..  451141 +  -9.1  -5.45726   CTGAATCAATAACTG           ACCCGTGAC AGCAC GTCACGGGC           TTTTTTTGCCATCTC 100 29
HC660_RS02275  452251 ..  452262 +  -4.4  -2.84634   ACGAAATCTGTGCGC                GGTT AAGA AACC                 TATAATCATGTAGGC  48 9
        lepB NONE
HC660_RS02285  453407 ..  453432 +  -9.8  -3.92071   GAAAAATGAAAAAAA         CCCTTCACAA CCATTT TTGTGAGGGG          TTCTATTATTTCGTA  83 32
HC660_RS02295  454483 ..  454514 + -14.7  -3.44848   CATTGGGTACTATAA      GAAAAAGAGTCCT GAGATA AGGACTCTTTTTC       TATTTAATCAGGGAG 100 26
        pxpA NONE
HC660_RS02305 NONE
HC660_RS02310 NONE
        pxpB NONE
HC660_RS02320 NONE
HC660_RS02325 NONE
HC660_RS02330  460742 ..  460761 + -10.6  -6.02914   CAGTTTCATAGAAAA            CGCGCCTG ATCA CTGGCGCG             TTTTTTTTATATGAA 100 45
HC660_RS02335  461425 ..  461437 +  -3.3  -3.49475   GTCCCTCTTTAATAT                GAAGC ATA GCTGC                TTCTCTGACCATGCG  50 294
HC660_RS02345 NONE
HC660_RS02350  464615 ..  464636 + -10.2  -4.69664   TACCATAAAGAAAAA           GCATCAGC ATAACG GCTGATGC            TTTTTCAATACTGTC  91 33
HC660_RS02355  466891 ..  466913 + -10.6  -5.30616   CGTAATCACACATTT           CACACGCC AAAAAAA GGCGTGTG           TTTTTGTTTGGATGC 100 36
HC660_RS02360  468611 ..  468632 + -12.3  -5.09426   TTCATAAAAGAAAAA           GCCCGTCAT TTAT GTGACGGGC            TTTTTTGCGGTTGCG 100 34
HC660_RS02370 NONE
        lyxE  470747 ..  470770 + -10.4  -5.80817   GACCCTAGAATTTAA          GGATGAGGCTT AAA AAGCC-CATCC          TTTTTTTATATTGAA 100 26
HC660_RS02380 NONE
HC660_RS02385  472285 ..  472305 + -10.4  -5.55769   AAAGAATAAGACAAA           CCGCTCGGC ATAC GCCG-GCGG            TTTTTTATTGTGAAA 100 422
         amj  473216 ..  473237 + -10.2  -5.47159   TTTTGATGGAGAAAA           GCTGACCT GATGAA AGGTCAGC            TTTTTATTTATTCGG 100 35
        lrpC NONE
HC660_RS02410  476975 ..  476993 + -14.6  -5.80364   ATAAATAAAAAGAAA             CCTGTGCG ATT CGCACAGG             TTTTTTTATTGGACT 100 33
HC660_RS02415 NONE
HC660_RS02420 NONE
HC660_RS02425 NONE
HC660_RS02430 NONE
HC660_RS02435  484187 ..  484208 + -14.5  -5.73563   AGATAGAGAATAAGA           CAGAGGCTG ATAT CAGCCTCTG            TTTTTTTAATTTGGT 100 28
        kimA  486486 ..  486507 + -14.5  -5.08824   AAAGTAAGCAGCTAA           GACCAAGGG ACAT CCCTTGGTC            TTTTTTAAATAAAGG 100 34
HC660_RS02445 NONE
HC660_RS02450  488768 ..  488803 +   -15  -4.69053   GCTTAAAACGGTTAT    TCTAAAAAAACAGGGGC GAG GCCCCTGTTTTTT-GGA    TTTTATTGAATCATA 100 21
HC660_RS02475  492594 ..  492619 +  -8.3  -5.08824   ATGAATAGAAGAAAA         GCAGACGGG CACCGCAT TCCGTCTGC          TTTTTTCAGTCAAAA  91 33
HC660_RS02480  493128 ..  493153 + -12.6  -5.67529   ACCTGTAGATAAAAA         GCGATCCGGC GCAGCA GCTGGATCGC          TTTTTATTTTTGATT 100 66
HC660_RS02485 NONE
HC660_RS02490 NONE
HC660_RS02495  494881 ..  494906 + -11.9  -3.17763   CGCATTCAGATTGGC         GCGGAAGTCTG CCAG CAGGTTTCCGC          TTGCTACGATATAGC  83 460
        dctS NONE
HC660_RS02515 NONE
HC660_RS02520  500186 ..  500204 +  -8.8  -5.73672   AGTTTAAAAAAAGAG             CGGCCC ATCCATG GGGCCG             TTTTTTTCATTGTTT 100 34
HC660_RS02525  501582 ..  501604 +   -17  -5.40072   TATGATACAGCCAAA           GCCCGCGGGA GTC TCTCGCGGGC           TTTTTTTCAAAAAAG 100 229
HC660_RS02530  502902 ..  502931 + -12.3  -5.24129   ACAAATGCTATAATA       CAAACAGTGCCTA TTTT TAGGCACTGTTTA        TTTTTTGTCGAAAAA 100 58
HC660_RS02535 NONE
HC660_RS02540  504732 ..  504750 +  -3.8  -4.19371   AAGGTACTGACGGAG             GTGTCTCG AAT TGAGAAAC             TTTATTACCGCTTTA  59 111
HC660_RS02545  505079 ..  505104 + -15.5  -5.00895   CAAATCCGGTTTAAA         CACGCTGTTCC CTTG GGAACGGCGTG          TTTTTCTATAGTGGA 100 27
HC660_RS02550  506347 ..  506384 + -11.6  -4.46587   GCAGAAGCCTTTCAT   TAAATAAAAAAGAGCC TTTGCC GGCTCTTTTTTATGTA    TTGTTTTGTTCCTGG 100 23
HC660_RS02565  507803 ..  507817 +  -2.8  -3.73859   ACACAAAATAGGGCT               GCTTAT CGA ATTAGC               TTATATGTTCTGATA  51 30
HC660_RS02575  509382 ..  509407 + -10.5  -4.16943   TTCTAAATGGAAACT         GACACTGCC GGTAAAAG GGCAGTGTC          TTTTCCCGTATACCA  85 35
HC660_RS02580  511156 ..  511166 +  -3.2  -4.65895   GCTTTGTATACGTAA                 GGAT CCT GTCC                 TTTTTCCATGGAGGG  64 361
        cshA  512747 ..  512771 +  -9.4  -5.80817   GTAAAGAATATAAGA          GCCTAAAACA TGAGT TGTTTTGGGC          TTTTTTTATGTTCAA 100 45
HC660_RS02590 NONE
HC660_RS02595  514835 ..  514859 +  -6.4  -5.93809   GGTACTCATATGAAA         AAGCGGACGGT TAAT ACCG-CCGCTC          TTTTTTTTGTACACA 100 12
HC660_RS02605  515967 ..  515987 +  -2.5  -3.49232   GGAGACGAGTTGTTT            GAGGCTT TTATGGT ACGCCTC            TGTTCTGTTTAAACG  47 88
HC660_RS02610  517096 ..  517114 +  -9.6  -5.52384   AAATAATCTCCTAAA             GGCCGAAT ACA ATTTGGCC             TTTTTTTCGTCAGGC 100 35
         alr NONE
        endB NONE
        ndoA  519140 ..  519158 +  -8.9  -6.09196   AGTAATATTTGCCTA             GTTGCTC AAATA GAGCAAC             TTTTTTTGTTTTCAA 100 39
       rsbRA NONE
        rsbS NONE
        rsbT  520822 ..  520834 +  -7.7  -3.05816   GGTACAGAGATACAA                GCCAT TAA ATGGC                TTCGGTAGGAGGTAA  65 5
        rsbU  521883 ..  521895 +  -4.9  -3.56836   CCGGCCGTGGGTATA                TAACT ACT AGTTA                TTTAAAGGATAATTT  57 47
HC660_RS02650 NONE
        rsbW NONE
        sigB NONE
        rsbX  524099 ..  524119 +    -9  -5.64274   GGAATGTAGAAAAAA            GAAGCTGG GAAAG CCGGCTTC            TTTTTTTGTAGCTGG 100 40
HC660_RS02670  526443 ..  526460 +  -9.9  -5.21709   ATGGTAAAATAAAAG             CACTGCT TACG AGCAGTG              TTTTTTCCTATAGAA 100 29
HC660_RS02680 NONE
HC660_RS02685 NONE
HC660_RS02690 NONE
HC660_RS02695 NONE
HC660_RS02700 NONE
HC660_RS02705 NONE
HC660_RS02710 NONE
HC660_RS02715  528421 ..  528446 +  -3.3  -5.07567   AATTCTTCAATAAAT         GTCG-GTTTCTT TAA AAGAGACGCGTC         TTTTTTGGAATCTAA  74 490
HC660_RS02745 NONE
HC660_RS02750 NONE
HC660_RS02755  531365 ..  531387 + -13.5  -4.96388   GGCTGTTAAAAGGGT           GCCTGGCTA ATGAC TAGCCAGGC           TTTTCTTTAGTCCTT 100 32
HC660_RS02765 NONE
HC660_RS02770  533038 ..  533059 +  -7.4  -5.04249   TATAGCCAGAAAAGA           GAGATAAG TTTATT CTTATCTC            TTTCTTTTTTGGGGA  85 100
HC660_RS02790 NONE
HC660_RS02795 NONE
HC660_RS02800  536363 ..  536374 +  -5.8  -3.21126   TAAGCGTGCGGAATA                GCTG TAGT CAGC                 TTGATGGCTATAATT  57 216
HC660_RS02805 NONE
HC660_RS02810 NONE
        conQ NONE
        nicK  539768 ..  539779 +  -5.8  -3.35964   AATTTTGTATCAATC                CGTG TATT CACG                 TAATTTTGTTTATGC  58 348
HC660_RS02830 NONE
HC660_RS02835 NONE
HC660_RS02840 NONE
HC660_RS02845 NONE
HC660_RS02850 NONE
HC660_RS02855 NONE
        conE NONE
HC660_RS02865  546401 ..  546429 +  -6.7  -5.45802   GACGACTTAATCAAG        GGGGCGTTTGTTG GGC TGACAAACGTCAC        TTTTTCTTTTGCGGG  89 242
HC660_RS02875 NONE
HC660_RS02880  550161 ..  550171 +  -2.6  -3.01712   AGATTAAATTGTTTG                 TTTA TAC TAAA                 TATTGAAAAAGGAGG  43 51
HC660_RS02885  550576 ..  550604 + -13.3  -5.80248   GAAGAGACAAAGTTA        GAGGAGTAGACAC ACT GTGTTTATTCCTC        TTTTTTTGTGTGTTG 100 17
HC660_RS02890  552063 ..  552094 + -13.3  -4.11235   ATAAAAGAATAAGAA      TTAAAGAGCAAAC TAGAGT GTTTGCTCTTTAA       TTTGTCTGATCATTA 100 140
HC660_RS02915  557233 ..  557253 +    -4  -4.61527   CATCTTATATATAAT            TCAGCTTT AGTTA GGAGCTGA            TTTTTACAAACTTTT  66 49
HC660_RS02935  561642 ..  561673 + -11.1  -5.60993   TCGGCCGCATCCCAA      TAATACCAAGGGT TTAACC ACCTTTGGTATTA       TTTTTTTATGCGGAA 100 395
        lrpA  563705 ..  563740 +   -12  -5.65177   ATCTGCTCTAAAAAA    GCCCTAGTTTGGATATG ATA CTTA-CCAAGCTAGGGC    TTTTTTTATACATAT 100 86
HC660_RS02950  564818 ..  564852 + -11.7  -3.44527   AAATAAGAAATAGAA     GAAGCTCATAATTAT AAAAA ATAATCATGAGCTTC     TTCTCATAATGAATA  85 81
HC660_RS02955  566479 ..  566499 +  -8.4  -5.43866   AAATAATTAAAAAAA            GCTTAATC TTTTT GATTAAGC            TTTTTTTAAAAGTTC 100 209
HC660_RS02970  569658 ..  569670 +    -2  -4.66002   TTCCGTTTCGTGTTA                TTCT AAAGA AGAA                TTATTTTTGTTCGTG  61 397
        cspC  569999 ..  570021 +  -7.7  -5.55698   AAACGTTTATAGAAA           CAGGCTCTT TATAT AGGGGCCTG           TTTTTTTACGTTCTC 100 46
        cspC  571026 ..  571048 +   -15  -5.55698   AAATGTTTATAGAAA           CAGGCTCTTA TAT TAAGAGCCTG           TTTTTTTGCGTTCTC 100 46
HC660_RS03000  574188 ..  574199 +    -3  -4.15881   TCTTAGATTTATCAT                TTGA TTTT TCAA                 TTCTTTATAATCTTT  55 174
HC660_RS03005  574965 ..  574994 + -12.2  -4.54026   ACAAAAAAATACAGA       GGGGCGGTTC AAGTATGAAA GAACCGCCCC        TTATTTTGTTTGGCA 100 156
HC660_RS03020 NONE
HC660_RS03025 NONE
HC660_RS03030  578439 ..  578453 +  -2.1  -4.37495   AACTTGTGTGAAAGT               TCGAG GAACA CTTGA               TGTTTTTTATTCCAT  59 105
HC660_RS03040  580966 ..  580994 + -12.5  -4.49167   CTCGGCCGAAACAAA        GATACCAAGGGTT GTA GACCCCTGGTATC        TTTTAATGTTCTCTT 100 274
HC660_RS03050  583608 ..  583626 +  -2.5  -4.37711   TTGGCGGAAAAATCA             TACGAAA ACGGC TTTTGTA             TTTTGCCTTTAATCA  60 113
HC660_RS03055 NONE
HC660_RS03060  584604 ..  584639 +  -6.2  -5.23943   CGATTAGCTGAGCAT    AGTAAAAAGGAGCAGC ACTT GTTGCTCTTTTTCACC     TTTCTTTTTTTCATC  84 114
HC660_RS03065  586008 ..  586039 +   -11  -5.37043   TACTGGAATTACATT      GCCTCCTG-TCTCGT ATA ATGAGAATAGGAGGC      TTTTTTGTATCAGGT 100 143
HC660_RS03070  586883 ..  586904 +    -3  -4.81551   TGCATGATATAAAAA           GCATACCA AGAACA TTGTATGC            TTTTTCATCTCCGTG  65 66
HC660_RS03080  589894 ..  589913 +  -8.5  -5.76633   TTTGGATTATTAAAA            GCGGGGC TTCGAT GCCCTGC             TTTTTTTGTATATGG 100 28
HC660_RS03085 NONE
        manA  593031 ..  593045 +  -8.6    -5.055   AGTTAAATATAAAAA               GATACC ACT GGTATC               TTTTTTCACGCTTCA  91 115
HC660_RS03095  593841 ..  593862 +  -7.4  -5.84381   CATCTTAGAAAGAAA           CATACCAA ATCATA TTGGTATG            TTTTTTTGTTCATGC 100 105
HC660_RS03105  596607 ..  596622 +  -5.4  -3.19186   TAAAAAACAGAAGTG              TCCCTT AAAA GAGGGA               ATTCTTTTATGGATA  54 167
HC660_RS03110  597451 ..  597466 +    -9  -3.93367   ATCGGGTTAAAAAAA              CCCTTC TTAG GAAGGG               TCTTTTCTTGAGCAC  79 31
HC660_RS03125 NONE
HC660_RS03130  599795 ..  599823 +  -7.4  -3.05816   ACTGGAGGTAAATAA        CAAGACGTGCTG CCTTT CAGCACATCATG        TTACATCAAAAATAA  62 96
HC660_RS03135  600256 ..  600284 + -12.6  -5.10163   TACGAAAGTATGTAA        GAACAGTTACTG GCAAG CGGTAACTGTTC        TTTTGTTTTGCCATT 100 41
HC660_RS03140  600975 ..  600997 +  -9.2  -5.25735   AAGTGAAGCAAAAAA           GGGTGTTACA AGG TGTAGCATCC           TTTTTGATTTTTTAG 100 237
HC660_RS03145  602108 ..  602132 + -14.4  -2.53015   CGAAAACTTGAAAAA          TACCAAGGGC GAACA GCCCTTGGTA          TCCCTTACACACTAT  95 307
HC660_RS03165 NONE
HC660_RS03170  609916 ..  609940 + -15.1  -4.40333   ATCTAAAATGAAAAA          GCTCCCAAGAG TCA TTCTTGGGAGC          TTTGTATTATTTCCA 100 468
HC660_RS03195 NONE
HC660_RS03200  612924 ..  612948 +  -3.6   -5.4492   ACATTAAAACCACGA          TATCAGGG GGAAGTAGA CCCTGGTA          TTTTTTGTGTCTATG  79 58
HC660_RS03205  614310 ..  614326 +  -8.7  -5.90981   AATTAATCAAAAAAA              CCTGACG GCA TGTCAGG              TTTTTTTTGATCTCA 100 35
HC660_RS03215  616020 ..  616041 + -11.7   -5.5353   AATGACATGTACGGA           TACCAAGGA AGAG TCCTTGGTA            TTTTTTATTGCTCTC 100 40
HC660_RS03220  617408 ..  617425 +  -9.1  -4.81734   TCAGAAAAGTGTAAG             GGCACCG AACA CGGTGTC              TTTTTAGTGATGTTT  88 27
HC660_RS03225  618894 ..  618914 +  -2.6  -4.31698   AAAATAAGAAAAAAA            GTGAGA TTTATATGT TCTCAC            TCTTTTTTCATTTAG  58 47
HC660_RS03230  620919 ..  620935 +  -5.9  -3.70546   CAATTTTGATCTTTT              GAGAATC ACT GATTTTC              TTATGGTTTTGGTCA  62 360
HC660_RS03245  624362 ..  624377 + -11.8  -4.37092   CGAAAACTAACCGAA              GCCGCG CAAC CGCGGC               TTTTATCCAGCGCGT 100 31
HC660_RS03250  625129 ..  625148 +  -6.4  -5.45726   TAAATAATAAAAAAA            TCCTCCCT TTAC AAGGAGGA             TTTTTTTACGGTATG  89 34
HC660_RS03260 NONE
HC660_RS03265 NONE
        celB NONE
HC660_RS03275  630150 ..  630161 +    -3  -3.35542   CGGTAAAGAAGCTTA                TTTG ATAT CAAA                 ATTTTTACAGCTGCC  46 138
        gmuR NONE
HC660_RS03285  631814 ..  631836 +  -2.6  -4.85782   AGAAGAAGCATCCGG           GGAGGTTCCA TCA TGAAGCATCC           TTTATTTTTAGAGCC  67 10
        manA  632767 ..  632786 +  -2.8  -3.11962   GCTGATCATAGCCCA            TCCTTCAT AAGA ACGGAGGA             ATTTCTGTGTTAAAG  44 16
HC660_RS03295  633904 ..  633929 + -16.3  -4.30576   TTTTACATTAATAAA         GGTTCTCAAGG ATAT CCTTGAGAACC          TTTTGCTCATCAAGC 100 48
HC660_RS03305  635214 ..  635227 +  -5.3  -2.87051   CGCGCCAATATAATA               TACAC GCGG GTGTA                GTTTAGTGGTAAAAC  52 34
HC660_RS03310  635380 ..  635396 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  50 112
HC660_RS03315  637011 ..  637036 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC660_RS03320  640076 ..  640093 +  -8.5   -4.0031   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTGTTTGGTGGCGAT  77 54
         rrf  640204 ..  640214 +  -2.4  -4.74767   TGTGAGAGTAGGACG                 CCGC CAA GCTG                 TTTTATCTTAATTAT  64 17
HC660_RS03330 NONE
HC660_RS03335  640507 ..  640526 +  -7.9  -4.62441   TTTATTGCGTCTTTT            GCTTGGT ATGATA ACCAAGC             TTTCTTTATATCAGC  83 89
HC660_RS03340 NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD  644248 ..  644272 + -10.7  -5.70522   TGACTTCTTATCAAG          GTCTCACGACA TAA TGACGTGAGGC          TTTTTTATTGTTATT 100 12
        moaC NONE
HC660_RS03375 NONE
       tatAY NONE
        tatC  648674 ..  648699 + -10.6  -5.22481   ACCATCATAAAAAAA         TCCATTTCTC ATAGAA GAGAAATGGA          TTTTCTTTATTTCTG 100 40
HC660_RS03400  650133 ..  650150 +  -6.3  -3.67597   CGTGAAAGCGACATT             TTAGCTG TTAT CGGCTAA              TTCTTAAATAAACAA  62 8
        groL  651918 ..  651956 + -16.2  -6.18768   CATTTATAAATTTTT   GAGGCTTCTCATGAGTTC ACC GAACTTGTGAGAGGCTTC   TTTTTTTTCTGTTTT 100 112
HC660_RS03410  653630 ..  653653 + -12.5  -3.53881   TAATAAGAAACGAAA          GGCCAACTG CGACTT CAGTTGGCC           TATTCTATTTATAAT  95 45
        gutB  657510 ..  657530 +  -9.8  -3.59653   ATAGCTGAGTGAACA            GGGAGAAT CTCGT ATTCTCCC            TCTTATTTACTGGAT  80 33
HC660_RS03425  658988 ..  658998 +  -2.6   -3.1247   AATGAATATATTTAA                 TATT TCT AATA                 TTCGATGTAAAAGGT  44 36
HC660_RS03430  660057 ..  660101 + -16.7  -5.41359   TTTGTGATAAAAATC GAGGATGTTTCTTAAAAGTCT CTT GGACTTTTGGGAGGCATCCTC TTTTTTCCTTTACTT 100 34
HC660_RS03440  663154 ..  663177 + -11.1  -4.33803   CTAAGAGGAATAAAA          GAATCCGCA CTTGAA TGCGGATTC           TTTATTAGTATGTTT  88 37
        walM  665066 ..  665085 +  -6.5   -5.1244   GTTTAAATCTGTAAA            GCAAGAA GTCGCA TTCTTGC             TTTTTCTATTGGTGG  83 47
HC660_RS03455  666162 ..  666183 + -13.1  -5.52384   CATCAACTGAAAAAA           TCACTCAGC AAAT GCTGAGTGA            TTTTTTTAATGGACG 100 31
        mneS  673078 ..  673096 +  -7.4  -5.96894   AATAACTGGTAAAGA             GCTTCCTG TCA TGGGAAGC             TTTTTTTGTTTGAAT 100 36
HC660_RS03495 NONE
HC660_RS03500  675359 ..  675375 +  -4.3  -3.90744   TCAAATCATGAGAGG              CGGGCGA GCT TCGCGTG              TTGTTTAGAAAGAGA  59 1
HC660_RS03505  677696 ..  677725 +  -2.1  -4.04353   ACGGCCTTGCCAAAA       GAGGGCGGAGCGTG TTT CATA-TCTGTCCTC       GTTTTTTTCTGTGTC  54 113
        guaA  679329 ..  679361 +  -8.6  -6.32017   TAAAATTAGCGAAAA     CCATTTTCTTTGGCA ATTA TGCC-GAGAAGATGG      TTTTTTTTGTTTATT 100 42
        pbuG  681027 ..  681049 +   -12  -5.92399   AATAATGATTGAAAA           CCAGCTGCAG TTT TTGCGGCTGG           TTTTTTATTTTGTTG 100 36
HC660_RS03520  682041 ..  682057 +  -7.2  -5.21709   TTTAATGTAAAAAAA              CCGGCT GAAAA GGCCGG              TTTTTTGATGTCACA  91 36
        fbpA  682347 ..  682364 +  -7.7  -5.67283   AATAAAGAAATGTGA             GTCTGCT GAAA AGCAGGC              TTTTTTGTTTGGATT 100 46
HC660_RS03530 NONE
HC660_RS03535  683524 ..  683569 + -10.7  -5.86976   CCGATACATGCACCA TGCCCGG-TTTGTATTGCTT CCTCATA ATGCAATACAAAGCCGGGTA TTTTTTATTTTCTGA 100 257
        purE NONE
        purK NONE
        purB  686537 ..  686565 +    -6  -3.60792   TAGCTTAGAAGAAGC        TTTTAGCGGCTT CTTCT AAGCCGCTGCAG        TTTGAAAATTCCCAA  62 33
HC660_RS03555 NONE
        purS NONE
        purQ NONE
        purL NONE
HC660_RS03575  691893 ..  691912 +  -6.4  -4.40003   TGAAAATGACATAAA            GGCAGC GCAGTTCG GCTGCC             TTTCTCTTTCTGCCC  75 45
HC660_RS03580 NONE
        purN NONE
        purH NONE
        purD  696429 ..  696448 + -10.7  -5.18726   TAAAGAGATGAAAAA            CCCGCAG ATTGTG CTGCGGG             TTTTTGTTATACCAA 100 38
HC660_RS03605  698277 ..  698301 + -10.1   -5.4756   ATATTCTGAAAAAAA          GCTTGATCACA TTT TATGATCAAGC          TTTTTTCTTACGATT 100 7
HC660_RS03615 NONE
HC660_RS03620 NONE
HC660_RS03625  701756 ..  701781 +  -7.6  -5.93809   CTTCCAAATAAAAAA        CCG-CCCT-GCC GTTT GGCTAGGGGCGG         TTTTTTTTATGAAAC 100 30
HC660_RS03635 NONE
        pcrA NONE
        ligA NONE
HC660_RS03650  709813 ..  709844 + -15.2  -4.42081   ATGACTAAAATAAGT      TAACCCCTTGCGCCG TAG CGGCGCT-GGGGTTA      TTTTACGTTTATATT 100 33
HC660_RS03655  711131 ..  711141 +  -2.6   -3.6806   CAAATATAGACAATA                 TATT ATA AATA                 TTTACATAAATATGT  49 32
HC660_RS03670  713149 ..  713185 + -15.3  -2.69647   GCTCGTCTAGAACGA    AAAAAGCCAATGGGACA TAA TGCCCCATTGGCTTTTA    TAATGTATCGCACTT 100 31
        gatC  716175 ..  716188 +  -2.4  -2.99704   CTGGACTAAAGGAGG               GACA CAAGAA TGTC                ATTATTTGATCACAA  42 32
        gatA NONE
        gatB  719093 ..  719121 + -11.1  -5.67063   AACGCTAATGAAAAA       GCAGCTCTCCTC ATTGCA GAGG-GAGCTGC        TTTTTTTATGATCAA 100 33
HC660_RS03705  723268 ..  723299 + -13.2  -3.61097   GAAGAGTAAAAATGA      CA-AAAAGCCTCAGC TAT GCTGGGGCTTTTCTG      TGTTTCCTTCTGTAA 100 32
HC660_RS03710  724329 ..  724348 +  -8.6  -5.33026   CTGGATGACTAAAAA            CTTGGCTT TAAT AGGCCAAG             TTTTTCTTTCGCTTA 100 29
        rlmD  726123 ..  726154 +  -3.1  -4.49531   CAGATGCTATTATGA      CATCAAAGGAGCA AATAAA TCTTTCTTTGATG       TTTGTTGATTTTCTT  62 368
HC660_RS03720 NONE
HC660_RS03725 NONE
HC660_RS03730  730010 ..  730043 + -14.8  -2.80074   TTTAACAGGAAAAGT     TCGAGTAAAGGCGT AAATAA ACGCCTTTACTTGA      TACTGTTATAGGAGG 100 10
HC660_RS03735 NONE
HC660_RS03740  733959 ..  733989 +  -7.7  -5.10877   GCTTAAACAACAAAA      GGCAGT-TCCTAAT ATTC ATTTGGAGACTGCC       TTTTTAATTTCTTAT  89 72
HC660_RS03750  734751 ..  734764 +  -3.9   -2.9621   AGGCATAAAATGAGT               TTGTT TCCC AACAA                TCATTTAGATATAGT  47 41
HC660_RS03755  735410 ..  735424 +  -2.1  -3.42841   TTGGTGAAGTTTATT              TGCGGG CAAA CCC-CA               TTGTAGTAGAATTAT  46 5
HC660_RS03760 NONE
HC660_RS03765  737213 ..  737254 + -13.3   -3.8211   TGGCAGTGCTTGAAC TTAGAGAAGGCAACTAACCC TTG GGGTT-GTTGCCTTTTTTGA TTGTTATAAATGGAA 100 400
HC660_RS03820  745378 ..  745396 +  -8.9  -5.40072   AATAAAATGATATTG             GACCCTT GCATA AAGGGTC             TTTTTTTGCCGAGAA 100 44
HC660_RS03825 NONE
HC660_RS03830  746814 ..  746828 +  -7.1   -5.9003   GATCAGGATAAGAAA               GCCCT TAGTT AGGGC               TTTTTTTCTTGCTTT 100 14
HC660_RS03835  747722 ..  747740 +  -7.4  -5.88565   GTGAATAAAAAATGA             GCAGACTG TCA TGGTCTGC             TTTTTTTATTGTCCG 100 33
HC660_RS03840  748237 ..  748257 +  -7.6  -6.01725   AGCGTGAAAAACGGA            CACTCTTG CTGAT CAAGGGTG            TTTTTTGTTTTTCTT 100 43
HC660_RS03845  748926 ..  748938 +  -2.6  -3.61219   ACTTTTTTTGATAAA                GGGT GCTTA GCCC                TTTGACGCATTTTCT  49 40
HC660_RS03850 NONE
HC660_RS03855  750316 ..  750344 + -16.1  -5.10064   GACTGATCGATCTAA        AAAGACCTTCGGC TCT GCCGAAGGTCTTC        TTTTTATCTATTGAG 100 51
HC660_RS03865 NONE
HC660_RS03870 NONE
HC660_RS03875 NONE
       cotJC  753406 ..  753429 +  -2.5  -2.97511   ATCCTTTTACATACA          GACAAAATA TTCTGT TTTTTTGTC           GTTTGCTTGCATTAT  43 66
HC660_RS03885  754034 ..  754051 +  -3.3  -5.30575   AACAAGTCAGAATAA             GCGTCCT TTTT AGGGGGC              TTTTTTGCCTTTTTG  75 26
HC660_RS03890  754455 ..  754466 +    -3  -2.78596   ATATTACTTTACAAT                GAAA GCGT TTTC                 TGTAGTAGGAAGGTG  42 113
HC660_RS03895 NONE
HC660_RS03900 NONE
HC660_RS03905  757933 ..  757965 +  -4.2  -6.02546   GAATTCAGAAGAAAA     CAGGGAGGCGCT-TCC GCA GGATAGC-CATCTCTG     TTTTTTTTACTTTCG 100 2
HC660_RS03910 NONE
HC660_RS03915 NONE
HC660_RS03920 NONE
        yesR NONE
HC660_RS03930 NONE
HC660_RS03935 NONE
HC660_RS03940 NONE
HC660_RS03945 NONE
HC660_RS03950  768511 ..  768540 + -11.4  -2.75844   TAACAGAAGGGGGGA       AGGAACGGGCCG CACGCT TGGCCCGTTCCC        ATTTAAAATGAAACC  81 38
HC660_RS03955  770369 ..  770381 +  -6.2  -3.54129   ATAGCGGGAAACAAA                GCGG AGACC CCGC                TTTAGGAGGAATGTA  60 8
        mgrA NONE
HC660_RS03965 NONE
HC660_RS03970  774059 ..  774082 +  -6.8  -5.36441   AGTTTGATAATCGCA          GCTGATTC TTTGCATT GAATCAGC           TTTTTTATATGGAAG  89 21
HC660_RS03975 NONE
HC660_RS03980 NONE
HC660_RS03985 NONE
HC660_RS03990 NONE
HC660_RS03995 NONE
HC660_RS04000  782353 ..  782376 + -11.8  -4.36729   TTTTCATGAAAAAAA          GAGCTTGCGGC ACA GCC-CAAGCTC          TTTTCCGTTATTGAT 100 32
HC660_RS04020  784748 ..  784784 +  -9.5  -5.00138   GATGAAATCTGATGA    GGCATATGACCGTCC CTTGAGT GGGTGATCATATGCC    TTTTTGATTTGAATG  91 41
HC660_RS04025 NONE
HC660_RS04030  785823 ..  785845 + -11.3   -4.8543   ATGATTAATCAGAAA           GCGCCTGTC ATTGA GATAGGCGC           TTTTTGTGACGGTTG  93 33
HC660_RS04040  787778 ..  787798 + -12.7  -5.25735   TATTAAAAAGGAAAA            GTCCAGAAT TGA ATTCTGGAC            TTTTTAATTTTTTAA 100 35
HC660_RS04045  789490 ..  789520 +  -6.2   -5.5454   ACTGTTTTAGAAAAA       GAGAGAATGTTATA TTC TGAATCATTCTCTC       TTTTTATTTATTTAA  89 58
HC660_RS04055  793961 ..  793980 + -12.2  -4.86822   GATTGTTTTTACAAA            GGACTGGA GAGA TCCAGTCC             TTTTGTTATGTCCTT 100 43
HC660_RS04060  796327 ..  796362 + -18.4  -5.75478   GAATAAGACAAAGAA    GAGCCTTGAGCG-GGCG TAT TGCCGCGCTCAGGGCTC    TTTTTTTGTGTGGTT 100 35
HC660_RS04065 NONE
HC660_RS04070 NONE
HC660_RS04075 NONE
HC660_RS04080 NONE
HC660_RS04085  801378 ..  801397 +   -15  -5.07567   AGCTTGATTAAAAAA            CCCCTGCC GCCC GGCAGGGG             TTTTTTCAGCTATGC 100 30
        yfmT NONE
HC660_RS04110  807529 ..  807551 + -15.6  -5.71712   TGAAGAAGAGTAAGA           GACTGGGGAC AGA GTCCCCGGTC           TTTTTTTCTGTCCGG 100 28
HC660_RS04115  809555 ..  809577 + -14.9  -5.44721   TGGAAAGCTAAAAAA           GTGCGGCCT ACTGC AGGCCGCAC           TTTTTTTCACATAAT 100 30
HC660_RS04120  810138 ..  810160 +  -7.7  -5.52096   AATAGGCTAATGAAG           GACGGGTGC TTTAC GTACTCGTC           TTTTTTATTGCATTT 100 42
HC660_RS04125  810683 ..  810698 +  -5.4  -4.72007   GAAAAGTTTGCCAAA              CGCTAT TTTT GTAGCG               TTTCTTTTAATGGAA  74 39
HC660_RS04130  811934 ..  811955 + -10.9   -5.1861   ACATTAATAACGAAA           GACACTGCG CATA TGCAGTGTC            TTTTTTAATCATGGA 100 34
HC660_RS04150  815928 ..  815945 +  -9.1  -5.55769   AAGACGAAATAAAAA             GGAGGGC AAAA GCCCTTC              TTTTTTGTTGTAAAA 100 29
HC660_RS04155  816458 ..  816476 + -11.7  -2.54568   CATATAAACCCAAAA             GGAGGGC AAAAA GCCCTCC             CATTTTCATCTTCAG  80 44
HC660_RS04190  822529 ..  822558 + -15.9  -5.93252   GATGCAGGATTGTAA       CCCCAAAAGG-CGA TTA TCGTCCTTTTGGGG       TTTTTTATTTTTGCG 100 39
HC660_RS04195  823988 ..  824010 +  -7.8  -5.66868   TTAAGTAGAAAAAAA           CACAAAGG GTGCTCA CCTTTGTG           TTTTTTTAATTAATT 100 37
HC660_RS04200  825550 ..  825566 + -12.3  -5.88197   GGTAGAAAGAAAAAA              GGCAGAC GCG GTCTGCC              TTTTTTTATGTTTGA 100 36
HC660_RS04205  828787 ..  828821 + -17.5   -3.4252   TTCAAGCATATGAAA     CAAGAAACCTACTTT ATAAA AAAGTAGGTTTCTTG     TTGTGCTCAATGGAA 100 74
HC660_RS04230 NONE
HC660_RS04235 NONE
HC660_RS04240  836172 ..  836194 +  -9.9  -5.47159   GCAATTAAGCAAAAA           GCATTCTGC CGTAT GCGGAATGC           TTTTTTGTGTTGGAG 100 33
        citM NONE
HC660_RS04250  838515 ..  838532 +  -9.1  -6.32017   TTATCATCCCTTTGA             CACTCGC AAAC GCGGGTG              TTTTTTTTATTTGTT 100 26
HC660_RS04255  839874 ..  839885 +  -5.8  -4.56597   AAAATCTCGACACGC                CCGT CTTC ACGG                 TTTTTGACCCAGCCG  72 173
HC660_RS04265  840994 ..  841016 +  -3.4  -3.81089   CGGGGGAAACTGAGT           CTTTCGCA CTAGTGA TGCGAACG           TTCTTCCTGTATGTA  53 295
HC660_RS04290  843991 ..  844012 + -14.5  -5.74288   GGTGAAATAGAAAAA           GCAGAGAGG CTGG CCTCTCTGC            TTTTTTCTTATTTAT 100 31
HC660_RS04300  846693 ..  846703 +  -2.6  -3.97602   CAGTTCTGTCTGTTC                 TAAA AGG TTTA                 TGTTTTTCCATCTGT  53 101
HC660_RS04305  848268 ..  848287 + -10.8  -3.05536   AGCGTTATTGACTCT            GAGGCTTT CTGT AAAGCCTC             TCTTGAACCTCCTTT  80 123
        treP  850237 ..  850258 +    -3  -5.25735   ATAACAAAGGGGAGC           GGGACGTGT GATTG ACG-GTCCC           TTTTTCCTTTTTTCA  73 37
        treC NONE
        treR  852728 ..  852749 + -12.3  -5.13344   CGGGGAAAATAAAGA           GCGC-CTGCC TGC GGCAGAGCGC           TTTTTCTCTTGGTAT 100 29
HC660_RS04325  853536 ..  853555 + -13.6  -5.64274   GGTATAAAAAAGAAA            GCTGCTCG ATAA CGAGCAGC             TTTTTTTATGCCTGA 100 34
HC660_RS04335  858711 ..  858733 + -11.3   -5.1861   GAAAAATAACAAAAA          CGGACG-CCC TGCG GGGACGTCCG           TTTTTTCATGATCGC 100 32
HC660_RS04350 NONE
HC660_RS04355 NONE
HC660_RS04360  862385 ..  862409 + -18.7  -5.18726   ATCATTAGAACAAAA          GCCTCCTGACA TCA TGTCAGGAGGC          TTTTTCTTATGAAGA 100 193
         cax NONE
HC660_RS04375  865688 ..  865708 + -12.7  -5.83226   AAGATAAATAAAAAA            CTGATTCCA TTA TGGAATCAG            TTTTTTTATTGGGTT 100 34
HC660_RS04390  868012 ..  868026 +  -8.5  -5.47159   AGACTGGGAATAAAA               CCGCG CTTGC CGCGG               TTTTTTATATTGGCA 100 28
        pdaA  868906 ..  868932 + -11.6  -4.62163   GTCTTTGTAAACAAG         AAAGCCTCTCCG CAA TGGAGAGGCTTC         TTTCTATTTTTCTAT 100 31
HC660_RS04410  871905 ..  871925 +  -9.8  -2.55351   GAAAAAACCATTTCA            CTTTCTGC CATCC GCAGAAAG            CTTCATATAGAAACG  73 92
        rlmD  873498 ..  873521 +  -2.5  -4.50943   CCTGACCCTATGACT          CAAACTG-CT TTTCT AGTCGGTTTG          TTTTGTCGCTTGTTA  60 171
HC660_RS04420  874729 ..  874741 +  -2.6  -5.60993   GGTAAAATAAACAAT                TCCG ATTTC CGGG                TTTTTTTGTACGCAG  80 84
HC660_RS04425  875393 ..  875407 +  -4.2  -4.08945   TATATCTATCATGTA               TGGTTC GGT GATCCA               TTTTCGAAAAGTGCT  61 123
        acoA NONE
        acoB NONE
HC660_RS04445 NONE
        lpdA  880637 ..  880654 + -12.7  -5.64873   TGCATAACAAGAAAA             GCTGGCG AATG CGCCAGC              TTTTTTATTGTTGAA 100 34
HC660_RS04455 NONE
HC660_RS04460  882788 ..  882811 +   -11  -4.81212   AGGATTAAACAAAAA          TGGCCCGCTT TCAT AAGCAGGCCA           TTTTGTTATGCTCGC  91 33
HC660_RS04490 NONE
HC660_RS04495 NONE
        malP  890199 ..  890216 + -11.3  -4.55798   GATCAATAAAGCAGA             CCCTCCT TTAT AGGAGGG              TTTTCGTTTGCCGTC  90 32
HC660_RS04505 NONE
HC660_RS04510  893835 ..  893857 + -10.7  -5.45652   AGCAATAATGAAAAA           GACCTTTGT CCTGC ACAAAGGTC           TTTTTTGTTACAGAT 100 33
        catD NONE
HC660_RS04520  895276 ..  895304 + -13.2  -5.98675   GTGATTTGACTGTCA        TCCCTTTGCCGT AAATA ACGGCAGGGGGA        TTTTTTATTTTTGTC 100 32
HC660_RS04525 NONE
HC660_RS04530  897496 ..  897510 + -11.4  -5.96219   GCGTTACCTTGAAAA               GGCCTG CCG CAGGCC               TTTTTTTTATGCCTG 100 60
HC660_RS04535 NONE
HC660_RS04540 NONE
HC660_RS04545  900917 ..  900938 + -10.1  -5.02439   GCTCCGAACGTAAAA           GCATCCGCC TCCG GGCAGATGC            TTTTTATCATTATAT  93 28
HC660_RS04555  902648 ..  902668 + -11.9  -5.86976   ATGCGCTAGATTAAA            CCTGCTGTT CAT GACAGCAGG            TTTTTTGTTTTCTGA 100 52
HC660_RS04560  904189 ..  904209 +    -9  -5.75342   AGGCTGAAACATCGC            GGCAGGAG AAACG TTCCTGCC            TTTTTTTTACGCAAA 100 34
        bstA  905227 ..  905237 +  -2.4  -3.97102   ATGATAGCGTGCCAA                 GCGC CGT GCCC                 TTATTCGTTTTCGCT  53 378
        mprF  909756 ..  909780 +  -9.4  -5.95539   GGCAAAAGCAAAAAA         GA-CTCCGTCT AAAC AGACGGAGTTC          TTTTTTTATTTAGAC 100 14
HC660_RS04590 NONE
HC660_RS04595  912957 ..  912981 + -11.6   -5.1861   ATTCCTGATCGTAAA          CCCATTTTCT CTGAA AGAAAATGGG          TTTTTTAATAATGAC 100 33
HC660_RS04600  913985 ..  913997 +  -4.9  -4.28774   TTTCCGTTATGATTA                TGATT GAT AATCA                TTTTCAATTGGATAG  66 70
HC660_RS04605  914617 ..  914643 + -12.3  -4.87893   CCGAGCTGTAAAAAA         CCCCCTGTCTC AAGCA GAGACAAGGGG         TTTTTCATTAACGTT 100 30
        recX NONE
HC660_RS04630  917196 ..  917214 + -13.2  -5.63517   AGCAGGGATGACCGA             GAGGCTGA ATA TCAGCCTC             TTTTTTATTTGAGCA 100 30
HC660_RS04635  918528 ..  918547 + -12.2  -4.21471   TAAAGGGTAAAAAAA            CAGCTGCA CATG TGCAGCTG             TTCTTCTTTTACCGT  95 31
HC660_RS04645  919105 ..  919134 + -12.2  -5.07107   GCTTTTACATTAACA       CAGCCTGCCG-GC ATAAA GTACGGCAGGCTG       TTTTTTACACATTTG 100 28
HC660_RS04660  920320 ..  920337 +  -7.7  -4.76892   CAAATACGCTAAATA             GACAGGC TCTT GCTTGTC              TTTTTGCCTTGATAT  84 29
HC660_RS04665 NONE
HC660_RS04670  921604 ..  921622 +  -7.4  -5.07941   GATTTTCTTTGCACC             GTCTGTCG AAA TGGCAGAC             TTTTTCTATGCTTTT  85 45
HC660_RS04675  922814 ..  922832 +  -5.2  -5.12617   TGCACTGAAATGAAT             GAATTGCC ATT GGCAGTGC             TTTTTTGCATGCTTA  76 33
HC660_RS04680  925446 ..  925479 +  -8.1  -5.25803   TTTATACAAGACGCA     AAAAAGCCCGGCTCT AAAT AGAGCCGAGCTTTAA      TTTTTTCTGAAGCTT 100 9
        mutY  927835 ..  927845 +  -2.4  -3.19442   TCATTGCGCTTCATT                 CCGC CGC GCGC                 TTCAATCTCTTGCGT  44 87
        fabL  928818 ..  928834 +  -3.6  -3.62491   CATTATCGTTGACGG              CGGGCG CTCAC TGCTCG              TTTAAAAAATTTTTT  53 4
HC660_RS04705  929186 ..  929210 +  -5.8  -5.56264   CTGAAACAGAAAAAA         GCACTT-CATC TTCG GGTGGAAGTGC          TTTTTTCTGTTTGAA  89 44
HC660_RS04710  929611 ..  929636 +    -9  -5.24291   GTGTAGAGCAGGAAT         GTGCCATTCC CAAGCC GGAATGGCTC          TTTTATTTTCATTTT 100 35
HC660_RS04715  930290 ..  930310 +  -6.9  -4.62336   ATGGTTACGTAAAAA            CCTGTTG CGGGGTA CAACAGG            TTTTTCACATGGGCT  79 40
HC660_RS04720  932110 ..  932138 +   -12  -5.71712   TGAATTAAACTTCAA        TCTTATATCCTT TTATC AAGGATATAAGA        TTTTTTTGTATAAAA 100 33
         bcp NONE
        perR  935946 ..  935972 + -15.3   -4.4448   AGAAAACCATTAAAA         TAAGCTGACCG CAAAA CGGTCAGCTTA         TTTATTTCGACATTT 100 28
HC660_RS04750  937536 ..  937552 +  -7.3   -3.3062   TTATACTAATAAAGT              CGCTTCT CCA AGAAGTG              TTGATGATCTTTGAA  64 143
HC660_RS04755  939262 ..  939287 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC660_RS04760  942304 ..  942314 +  -5.4  -3.41394   AACCTAATTTCTAAT                 GATG TCA CATC                 TGTTATCTAGTTTTG  57 31
         rrf NONE
HC660_RS04770 NONE
HC660_RS04775  942673 ..  942685 +  -3.3  -3.25942   TCAACTCCGTCTCAA                GGGTT CGA ATCCC                TTGCTCTCCGCCACT  48 0
HC660_RS04780 NONE
HC660_RS04785 NONE
HC660_RS04790 NONE
HC660_RS04795 NONE
HC660_RS04800 NONE
HC660_RS04805  943278 ..  943290 +  -4.9  -3.25942   CCTCTTGCCGGCACT                GTTTT TTC AAAAC                TTAATGTGGAGGGGT  54 26
HC660_RS04810 NONE
HC660_RS04815 NONE
HC660_RS04820 NONE
HC660_RS04825  943661 ..  943673 +  -2.7  -3.09933   CACTTTTATATCAAT                TGCAT ATA ATGTA                TTAAGTCCCTTAAGA  44 41
HC660_RS04830 NONE
HC660_RS04835 NONE
HC660_RS04840  944004 ..  944023 +  -9.4   -5.9218   AGCTAATCATATCAA            TGATCTAC TTAT GTAGATCA             TTTTTTTATTGTATG 100 93
HC660_RS04845  944296 ..  944317 +  -9.5  -6.11229   TCAGCAATACCAAGA           GACTTCTAC AATT GTAGAGGTC            TTTTTTTGTTTTACT 100 50
HC660_RS04860 NONE
HC660_RS04865  947649 ..  947659 +  -6.8  -3.95449   TTTTTTAAAGCTCTG                 GAGC TTT GCTC                 TTTAGTATCTTATGA  69 380
HC660_RS04870  948284 ..  948310 +  -7.3  -4.09963   AATAAATATTTATTC         GAGTCAGAGTC CTTAA GGTTCTGGCTC         TTGTTATTATTCACG  73 49
HC660_RS04875  948993 ..  949014 +  -2.2  -5.64873   ATATTTTGACAATGA           GCTGACTC TTTAAT GAGTGGGC            TTTTTTGTTATTCGA  79 21
HC660_RS04880 NONE
HC660_RS04885 NONE
HC660_RS04890  952472 ..  952511 + -18.2  -5.06414   ACCACCGGTATCCAA  TAGAACCCTGTTTCTTAC ATAA GTAAGAAACAGGGTTTTG   TTTTTATTAAAAAAA 100 272
HC660_RS04900  953697 ..  953723 + -17.4  -5.75599   GCAATAAAATAAAAA         GGCGGTTTCTCA AAA TGAGAGACCGCC         TTTTTTTATGGTTTC 100 34
HC660_RS04920  956482 ..  956505 +  -8.9  -5.33785   TCTTTCTGACTGTAA          CCGGGTTCA TTCAAC TGAATCCGG           TTTTTTGTGCTGGTT 100 247
        thiC  958431 ..  958456 + -12.7  -5.61881   GATCGGATCACCGAA         GGCTCTTATCT TTTG AGATAAGGGCC          TTTTTATTTTTAAAG 100 115
HC660_RS04930  958674 ..  958693 + -10.7  -5.37043   AATCTATGTAAAAAA            CCCGCTG AATAAA CAGCGGG             TTTTTTCTATGCGAT 100 30
HC660_RS04940 NONE
HC660_RS04945 NONE
HC660_RS04950 NONE
        ssuD NONE
HC660_RS04960  965023 ..  965037 +  -7.2  -3.55203   ATGATACATTTTAAA               TCGTAA TTA TTACGA               TTTAAAGGAGGTTTT  67 100
        rpsN  965333 ..  965358 +  -8.3  -5.85011   GCTGGTAAGAAAAAA         CTCCGG-ACGAT TAC ATCGCGCCGGAG         TTTTTTTCATTTTTC 100 33
HC660_RS04980  966301 ..  966337 + -10.3  -5.71712   TACATACGTTATTAA    CGCAGTGTTTCGTTTCT CAG ATAAACGAAGTATTGCG    TTTTTTTATGTAAAA 100 40
        queG  968260 ..  968294 + -10.3  -2.87683   CGTATAGAGCAGAAG     GAAAAAACACTTG AGATGCAGC CAAGTGTTTTTTC     TCTATAAAAAAGTAT  76 57
HC660_RS04995 NONE
        trmL  969766 ..  969787 + -15.9  -5.61596   TAAAATAGTGAAAAA           CCCGCCCAT GTGT ATGGGCGGG            TTTTTTTATAGAACT 100 33
HC660_RS05005 NONE
HC660_RS05010  971365 ..  971376 +  -7.2  -4.36914   AGGCTGCCGCATATA                CGGC ACAG GCCG                 TTTTCTCGGGAACGC  78 170
        prkA  974201 ..  974219 +  -9.5  -4.32669   CCGATAAGCAAGTGA             CCCGTCC GGACA GGGCGGG             TTGTTTTGTACCATT  85 34
        yhbH  975556 ..  975569 +  -5.2  -6.23545   TTATCCTAGTGAATA               GCCC ATTTCA GGGC                TTTTTTTTATTTAAA 100 32
HC660_RS05030 NONE
HC660_RS05035 NONE
HC660_RS05040  978540 ..  978553 +  -2.5  -2.88999   TACAGGGAGGTTTCC               TAAAT GAAA ATTTA                TGTAGTGTATGACAG  42 45
HC660_RS05045 NONE
HC660_RS05050  979469 ..  979497 +  -5.3  -5.70829   GAAATAATATCAAAG        GCAAATCCGTT TACTCAT GGCGGGTTTGC        TTTTTTTATGCTGTT  95 34
HC660_RS05055 NONE
HC660_RS05060 NONE
HC660_RS05065 NONE
HC660_RS05070 NONE
HC660_RS05075  983360 ..  983383 +   -14  -5.28942   ACTAATGAAAAAAAA          GCTGTTTTGC ATAA GCAAAACAGC           TTTTTCTTTAAAATA 100 36
HC660_RS05085  984905 ..  984931 + -11.1  -5.67063   TCTTTCAGATTGGAA         GAATGAATTCA AAAAA TGAATTCATTC         TTTTTTTATGGTAAA 100 7
HC660_RS05095  987615 ..  987652 +  -6.5  -5.75599   TTAATTTCAATAAAA  GA-CCCATGA-ACCTTG TAATAT CAGGGTTTCATGGGTTC   TTTTTTTATGATTTG 100 71
HC660_RS05100  988510 ..  988529 +  -5.1  -5.27335   AAGCATTATGTGAAG            GTATCAT AAAAAA ATGATAC             TTTTTCTTTCACCAA  79 9
HC660_RS05105  990268 ..  990301 +  -6.7  -5.31275   GCAGCATAAAAAAAA     TCCTTCAAACGTTCA TCAT TGAACGCAAGAAGGA      TTTTTTATGCTCACC  88 95
HC660_RS05115  991615 ..  991633 +   -11  -5.63517   AATAAAAGATAAAAA             GCCGCATA ACT TGTGCGGC             TTTTTTCTTTGCAGA 100 36
HC660_RS05130 NONE
HC660_RS05135  997596 ..  997617 +  -9.4  -5.55664   GTATTTCATAAAAAA           GCCGCAGG TCAATC TCTGCGGC            TTTTTTTCATGATAA 100 30
HC660_RS05145  999051 ..  999076 +  -7.7  -5.52384   ATAATCTCGCAGCAA         GAGCTTTTC CGTTTCAA GAAAAGCTC          TTTTTTTCATCAGAG 100 37
HC660_RS05150  999608 ..  999628 + -11.9   -4.1822   TGCATTAATTAGAAA            GAGCTTGCA GTG TGCAGGCTC            TTTCTTCACATAGAC  95 33
HC660_RS05155 NONE
HC660_RS05160 1001950 .. 1001969 + -12.1  -5.00616   AGAAATAATGCGAAG            GCCCGCC TGTATT GGCGGGC             TTTTTTAAAAAGCGG 100 33
HC660_RS05165 1002951 .. 1002980 + -12.3   -4.4078   CTGCTTTGGATGCTG       CATCCTCTTTCTT CTTG ATGAAAGAGGATG        TTTTAATTACCCGGC 100 8
HC660_RS05170 NONE
        glpP 1005157 .. 1005167 +  -4.6  -4.46576   GTAAAGGTTATACAC                 CCGT AAA GCGG                 TTTGTTGTGGTTTTT  66 122
HC660_RS05180 NONE
        glpK 1007619 .. 1007667 + -19.2  -5.19879   GTCCTGAGATGAGGA GAGACCACAGCA-CCAAAGTGTG AACA TGCACTTTGGCTGTTGTGGTCTC TTTTTCTATTTACCG 100 81
HC660_RS05190 1009377 .. 1009394 + -12.7  -5.79595   CGAGCAATAAAAAAA             CGGGCTG TCTG CAGCCCG              TTTTTTCTTTTAAAG 100 31
HC660_RS05195 1011251 .. 1011273 + -16.4   -5.5208   AATAATTCAAAAAAA           GCTGGATCAC GCA GTGATCCAGC           TTTTTTCTATTCTCA 100 36
HC660_RS05200 NONE
HC660_RS05205 NONE
HC660_RS05210 1013680 .. 1013700 + -12.5  -4.83243   CGCAAATACAGGAAA            CCCCGGCGT CTA ACCCCGGGG            TTTGTTTTATGTGAG 100 13
HC660_RS05220 1014483 .. 1014508 +  -3.2  -4.32046   TCTTTAATAAAAAAA         CTGTACAGCC GACAAA GGCCATACAG          TTTCATTTTTAGAAA  60 34
       spoVR 1018263 .. 1018282 + -12.2  -5.52079   ATTTATAAGAAAAAA            GGATGCAG CGAT CTGCATCC             TTTTTATTTTCCTGT 100 33
HC660_RS05245 1021215 .. 1021231 + -12.3  -5.63103   AATTTTACAAAGTAA              CCCGTTC ATA GAACGGG              TTTTTTTCATTAGAC 100 39
HC660_RS05255 1023373 .. 1023384 +  -2.2  -2.79831   TATTTTGCAGTTTAT                TCGC TTCT GTGA                 TGTGGTAAACATTCA  41 43
HC660_RS05260 1024308 .. 1024323 +    -9  -5.76949   ATAATGTACAAAAAA              CCAGCA GAAA TGCTGG               TTTTTTTTGCGCATG 100 37
        bcaP 1025955 .. 1025980 + -12.6  -4.75289   ATAACTCTCAAAGAA         GAGAGCGGCT TACACT GGCCGCTCTC          TTTTCTATTCTCATC 100 37
HC660_RS05270 1027414 .. 1027448 + -15.2  -3.25207   GGGATTATATCCTTT     TAGAAAAACAGGCTCC GCT GGGGCCTGTTTTTTTG     TATATTATGATTTCA 100 23
HC660_RS05280 1029405 .. 1029422 +  -8.4  -5.24129   GCTGTCATAAAAAAA             GACGCC GTTTCA GGCGTC              TTTTTTCTAAAAGCC 100 31
HC660_RS05300 1032464 .. 1032483 + -12.2  -4.66833   GGTATATAACAAAAA            GCTGAGGA TGAT TCCTCAGC             TTTTTGACGTTAAGA 100 21
HC660_RS05305 1033634 .. 1033652 +  -3.1  -4.24342   TAAACAAGCTGCCTT             GGAAATC GGTGA GATATCC             TTTCTTCATGAAAAA  60 467
HC660_RS05330 1038698 .. 1038724 +  -6.7  -5.64421   CATCTCGCACAAAAA         GATAACAGC GATCCCGAG GCTGTTATC         TTTTTTATTTGACGT  90 43
HC660_RS05335 1040723 .. 1040747 +  -7.2  -5.71712   TGCTGAACAGTGCAA          CCTTGAGC GAGAAATAA GCTCAAGG          TTTTTTTATGTCAGC 100 9
HC660_RS05355 1042606 .. 1042624 + -17.4  -4.71223   TAAAATGAGAAATTG             CCCCGGCG CTC CGCCGGGG             TTTTGTATGTTATAA 100 73
        mscY 1043840 .. 1043865 +  -9.8  -4.77036   GGCATAAAAAAGAAA         GACTTCGTCT GCAAAG AGGCGAAGTC          TTTTTCATGGTAAAA  91 34
HC660_RS05365 1044654 .. 1044678 +  -7.9   -5.5112   CTTGGGCATAAAAAA         GTGAGGCCGC AGATAA GCG-CCTCAC          TTTTTTATTCGTGAA 100 22
         dat 1046676 .. 1046699 + -11.8  -5.86609   TTTAATGATAAAAAA          GAGC-CCGCTT TGC AAGCGGCGCTC          TTTTTATTTTTTTAC 100 36
HC660_RS05390 NONE
HC660_RS05395 1052923 .. 1052945 + -11.4   -4.8543   CATAGCTTTCAAAAA           CCCAAGACAT CCA ATGTTTTGGG           TTTTTGTACGCATTA 100 36
HC660_RS05430 1058554 .. 1058568 +  -2.1  -3.51785   GCAATGATGAAAGGA               GCTAT GTACA ATGGC               TGTTAATTTTTATGA  46 108
HC660_RS05435 1058928 .. 1058948 +  -9.8  -5.87996   GCTAATCTATCAAAA            TCCCTTCT GGATA AGAAGGGA            TTTTTTTATTCGTTC 100 36
HC660_RS05445 1061393 .. 1061421 + -11.7  -5.03145   AACGCGTATAAAAAA       GCCGCTCGCGCC CAGACA GGTGCG-GCGGC        TTTTTTGCCGGATTG 100 30
HC660_RS05450 1062996 .. 1063017 + -14.5  -5.93809   TGAGAGAACGACAAA           GCAGCACTG ATCA CAGTGCTGC            TTTTTTTTATCCCCG 100 16
HC660_RS05470 1066090 .. 1066132 +  -9.9  -2.54896   AAGCGTAACAGATCA GCCGGGAAGCTGATCATCT CTGAA ACAAAATCAGCTTTCCGGC TGCATTCACTAAACG  73 33
HC660_RS05480 NONE
HC660_RS05485 1068563 .. 1068606 + -17.8  -3.29325   CGTTTGGCAAAAAAC TGATTAAAAAACAGCCTGGG AATG CTCAGGCTGTTTTTTAATTG TATTCGTTCTGACAG 100 23
HC660_RS05490 NONE
HC660_RS05495 1072833 .. 1072851 +  -4.6  -3.32698   TTATATAGCTGATAA             TCGGTATG TGA TATACTGA             TATTATGTAAGATAC  52 47
        yhaM 1073844 .. 1073873 +  -5.8  -5.13521   ATCAATAATGAAAAA       GGACTGATGCTGA CATGT TCAAC-TCAGTCC       TTTTTTACATGCTTT  80 40
HC660_RS05505 1074179 .. 1074206 + -10.6  -6.23545   CATCGCATAAAAAAA        GCTGCGCA-GCTC AGT GAGCCTGCACAGC        TTTTTTTTATTTAGA 100 31
       yhzE1 1075342 .. 1075366 + -11.5  -4.05788   ACTAAGCAGCAAAAG          GGATCGCTTGT TGA AAAAGCGATCC          TTTGCTTTCACAAGC  90 36
       yhzE2 1075549 .. 1075602 +   -15  -3.86835   GCTTTACTAATCAAT GTAAA-AAAGCATAGCTGCCAGTTCT AACG AGG-CGGGCAGCTATGCTTTCTTTAC TTTCCTCATATTTAA 100 31
HC660_RS05535 1077008 .. 1077024 +  -4.3  -5.52096   TCGGCTGATTCATCC              GCAGCAG TGT CCGTTGC              TTTTTTCTTCAGTTT  90 62
HC660_RS05550 1078471 .. 1078492 + -10.1  -4.55721   CTTTTAAAGAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTCACATTT  89 64
        ecsA NONE
HC660_RS05575 NONE
HC660_RS05580 1083970 .. 1083994 + -12.9  -5.67063   GAATATTAAAGTAAA          CAGCCGGAG AGTAAAA CTCCGGCTG          TTTTTTTATGATAAA 100 27
HC660_RS05605 1089843 .. 1089854 +  -2.2  -4.44797   GGAACCGATTACGTT                CAGC CGAA GTTG                 TTTTCCTCTTAATGG  59 2
        hemE NONE
        hemH NONE
        hemY 1093484 .. 1093503 + -12.2   -5.4251   ATTTATTCGACTAAA            CCTCCGTA CCGG TACGGAGG             TTTTTTGTGTCTAGG 100 27
HC660_RS05625 1094187 .. 1094211 +  -4.4  -4.32857   TTGTATGTTGTCAAA         GGATTGTC-AG CCAA CTAGATAATCC          TTTCTCTTTACAAGA  64 8
HC660_RS05630 1096610 .. 1096635 + -14.9  -5.95539   CTTCCTAATGAAAAA         GACCTTGTTTC TCAG GAAACAAGGTC          TTTTTTTATTTAACA 100 33
HC660_RS05640 1098640 .. 1098651 +  -4.4    -5.098   GAGTGGCAGCGTTTT                TTGC AAGA GCAA                 TTTCTTTTCTTTTTC  77 148
HC660_RS05650 NONE
HC660_RS05655 1100400 .. 1100428 +   -11  -5.26875   CAAGATTAAAAAAAA        GCCTGTGGGG CGATAAGAA CCCCGCAGGC        TTTTTTGATTAACCG 100 32
HC660_RS05670 1103028 .. 1103038 +  -2.4  -2.81182   TGTGGGAAGGATAAA                 GGAG GAG CACC                 ATGTTATTTATTGAC  41 27
HC660_RS05675 1104035 .. 1104045 +  -5.4  -3.90744   GATCTGATTTATTAA                 TGTG AAA CACA                 TTGTTTGAAAGGAAA  63 26
HC660_RS05680 1104752 .. 1104777 +    -4  -5.90231   CTATAACAGTACTGA         CACTC-GGGGC TTTTT GCTCTTGAGTG         TTTTTTTGTGTTTCT  93 35
HC660_RS05685 1106404 .. 1106437 +   -12  -4.84363   GTTGCCTCATTAATG     TGAGAAAAGCGAAGC AGCGG GCTTCGCTTTT-TCA     TTTTTAATCCTTTGC 100 28
HC660_RS05695 1108276 .. 1108301 +  -6.9  -5.55695   CCGATTAATAAAAAA         GAAGCAGGT ATGGAGTG GCCTGCTTC          TTTTTTATCTTATTG  93 33
HC660_RS05705 NONE
HC660_RS05710 1111427 .. 1111459 +  -9.3  -5.76237   AAATAAGAAGTTTCG      GCTTGCAGAAAAA AAGATGC TATTTCTGCAAGC      TTTTTTGTTTGTCTA 100 40
HC660_RS05715 1112649 .. 1112666 + -11.3   -5.8187   GAGAATAAATAAAAA             GACAGGC AAAC GCCTGTC              TTTTTTTATTGAATA 100 29
HC660_RS05750 1120496 .. 1120515 + -12.2  -3.73904   TGGATAATTAAAAAA            GCCAATCC TTAA GGATTGGC             TTATTCGCTCTGTTT  90 34
        comK 1121631 .. 1121655 + -11.4  -3.29511   ATTAGAAAATAGAAA          GGAGCTGACC AAACA GGGCAGCTCC          TTCTAAAACGCTAGG  84 36
HC660_RS05770 1123060 .. 1123080 +  -9.8  -5.72254   CGCTAAAGAAAAAAA            GCAATCTG TTGTC CAGATTGC            TTTTTTCTTGTTTAA 100 35
HC660_RS05790 NONE
        lepB 1126646 .. 1126665 +  -4.2  -5.33785   GTACACTGAGAAAAA            GGCGCC ATTTGCTA GGCGTC             TTTTTTGTGCTGATT  79 47
HC660_RS05800 NONE
HC660_RS05805 1128933 .. 1128950 + -11.3   -4.7339   TTTTTAAATAAAAGA             CACGCAC TGAG GTGCGTG              TTTTTCACGTTTCTT  91 30
        ntdR 1135103 .. 1135123 +  -8.4  -4.96848   TGTGTATAGAAAAAA            GAGGTTAT CATGT ATAACCTC            TTTTTCTATCAGGAA  90 74
HC660_RS05850 1139633 .. 1139651 +  -2.5  -4.19953   CTTCGCACACGCTTG            GCAATGAT CATG ATCAT-GC             TTTTCGCATTCAGTG  58 120
        addB NONE
        addA NONE
HC660_RS05875 NONE
HC660_RS05880 NONE
HC660_RS05885 1152789 .. 1152815 +  -8.8  -4.94992   AAGAAAAAATAAAAA        GCAGCC-CTCT CCTTGC AGAGCGGCTGC         TTTTTATCCGTTTCC  91 29
HC660_RS05930 1157588 .. 1157611 +  -6.6  -4.99035   TCGGCTAATTATAAG          GAGGGCGG CACAGGAA CCGCCCGC           TTTTTCTGTGGATCA  81 33
HC660_RS05935 1158066 .. 1158086 +  -9.7  -5.75478   TAGAAAAAGCTTGAA            CCCGGTTCT AAG AGAGTCGGG            TTTTTTTGTATGGTT 100 41
HC660_RS05940 1160909 .. 1160926 + -12.7  -5.65927   AAAAATAAAGAAAAA             GCGGTGC CGAA GCACCGC              TTTTTTATTTGCGTC 100 33
        asnB 1163510 .. 1163544 +   -13  -3.31196   TGAAGAAGCATAAAA     GAGAGGCCGATTCT GCAAAAA GGAATCGGCCTTTC     TTCATATACATTTGC  95 28
HC660_RS05955 1164642 .. 1164661 +  -5.6  -3.23216   CTGGGAATTTCGCAT            C-CCCCGCG GCG CGCAGGGAG            TTAATGATAATCACA  54 252
HC660_RS05965 NONE
HC660_RS05970 1167959 .. 1167975 +  -4.4  -5.41746   TAAATATCAGCCAAA              TAGTGG GTAAA CCGCTA              TTTTTTTAAAGCATT  81 145
HC660_RS05975 1169126 .. 1169147 +  -5.8  -4.34859   ATTCATATCAAAAAA           GCAAGGAC AATTTA GCCCTTGC            TTTCTGTCTTTTCAT  70 67
HC660_RS05990 1172272 .. 1172285 +  -8.1  -3.07935   TGTGAAGAACAGCCC               CGCTG AAAT CAGCG                TTCGATACATCACAT  62 407
HC660_RS06000 1173548 .. 1173563 +  -6.8   -5.1101   TGCTAAATAAAAAAA              CCCGAT CAAT GTCGGG               TTTTTTAAATAATGC  83 31
HC660_RS06020 NONE
HC660_RS06025 1177840 .. 1177865 +  -8.3   -3.2348   TAAAACAGCGGCTGC         GGGGCTCTC GGTATCGG GAGAGCCTC          TTGCCTATTACTTTT  70 38
HC660_RS06065 1186138 .. 1186171 + -13.2  -5.73978   AATAGCGCATGAAAA     TGGCTCGC-CTGCAG CAGAA CTGCGGAGCGAGCCG     TTTTTTATTTCTAAT 100 36
HC660_RS06085 NONE
HC660_RS06090 1189314 .. 1189332 +  -5.4  -3.21593   TGCCGCTTTTTTTCT             TTATTTGA ACG TCAAGTAA             TGTTGTAGGAGGCTG  54 7
HC660_RS06095 1189651 .. 1189678 + -12.1  -4.91852   GGTAGAATAGGAGCT        GAAGGACGGAG CGAAAC CTCTGTCCTTC         TTTCTTTTTCCTGAA 100 31
HC660_RS06100 1191415 .. 1191439 + -10.8  -5.94713   ATAAAAATGAAAAAA         CAGCCAGGGCT TTTC AGCC-TGGCTG          TTTTTTTTATGACCT 100 37
HC660_RS06110 1193294 .. 1193312 +  -5.2  -3.47307   TGACGAAAGCAGGTG             GAAGTCGT GAA ACGGCTGC             TTGTGATGCTCTTGC  56 38
HC660_RS06115 1193758 .. 1193780 + -17.8  -5.80364   TGAAGTCAAATAAGA           GGCTATGGCG ATT CGCCATAGCC           TTTTTTTATTGCAAT 100 28
HC660_RS06135 NONE
HC660_RS06140 1196321 .. 1196345 + -15.1  -4.59773   CAATAAAACAAAAGA          GGACAGCCTTA CTG TGAGGCTGTCC          TTTTTAAAACTGAAA 100 35
HC660_RS06145 NONE
HC660_RS06150 NONE
HC660_RS06155 1198565 .. 1198585 + -15.5  -5.61596   TGATGATGATGAAAA            CAGGCTGAC ACG GTCAGCCTG            TTTTTTTATGCAGCT 100 18
HC660_RS06160 NONE
        argJ NONE
        argB 1201834 .. 1201850 +  -5.1  -3.91716   GTCAAAGCAAAGGAG              GCTGTTT CAT GAGCAGC              TTGTTTCAAACCTAC  61 14
HC660_RS06175 1202976 .. 1202988 +  -4.8  -2.72441   AAACAAGCGATTGCA                CAGC ATTCC GCTG                TCAATTTGTAAATTT  49 2
HC660_RS06180 NONE
HC660_RS06185 NONE
        argF 1208170 .. 1208191 + -10.2  -5.60993   GAATAACCAAAAAAA           CTGCTGAG CCGGCT CTCAGCAG            TTTTTTTATGGAAAC 100 35
HC660_RS06195 1208453 .. 1208475 + -10.7   -4.8143   GTGATCACGAAAAAA           CCCAAAACA ATATA TGTTTTGGG           TTTTTGGCTTATTAA  91 37
HC660_RS06205 1209684 .. 1209707 +  -5.2  -4.56914   AGAATACAATAACAA          TAGCCTTCTC TTTT GCGGAGGCTG           TTTTGCTTTGGATAA  70 41
HC660_RS06210 1210404 .. 1210419 +  -3.2  -3.48981   AAAGGAGTTGAACAT              GACTTG ATCA CAAGGC               TTGTCATGATCTTTT  49 114
HC660_RS06215 NONE
HC660_RS06220 1211573 .. 1211592 + -10.8  -4.18697   ACCGAATAAGAAGAA            GCCACTTT CTCG AAAGTGGC             TTTTCACATGATTTT  86 32
        fabH NONE
        fabF 1214205 .. 1214229 + -17.9  -5.52384   AATCATGACGCCAAA          CCGGCTGCCCT AAA AGGGTAGCCGG          TTTTTTTCGTGCGCA 100 39
HC660_RS06240 NONE
        appD NONE
        appF 1217196 .. 1217207 +  -2.2    -2.954   GCTCCCAGCCATTTT                GTGG CTTG TCAC                 CTTTATAGCTAACTG  42 2
HC660_RS06255 1218950 .. 1218976 +  -7.3  -4.13711   AATTATATCCCTAGA         GAGGTGAGGAT TCAGC ATCCTTTCCTC         TTTATCCTATTTTAG  73 42
HC660_RS06260 NONE
HC660_RS06265 1221054 .. 1221066 +  -3.4  -4.85599   TGCACCTTGCCTATA                CTGT GGACA ACAG                TTTTTATAAAGTGAG  69 191
HC660_RS06270 1221850 .. 1221875 +  -9.8  -5.27477   GTAAACTAAAAAAAG         CCGCTCTTTGC AAATC GCAA-GAGCGG         TTTTTTGATTAGCGT 100 32
        oppA 1225283 .. 1225311 + -13.3  -4.70887   AATAAAAGACCTCAA        GGTATATGGGG AAAAAAG CCCCATATACC        TTTCTTTCTTACTGA 100 54
        oppB NONE
        oppC NONE
        oppD NONE
        oppF 1229232 .. 1229257 + -13.5  -5.94713   TTCATAAGTTGAAAA         TCCTTCAAAAC AAAT GTTTTGAAGGA          TTTTTTTTATAGGAT 100 34
HC660_RS06305 1230620 .. 1230643 +  -2.4  -2.60496   AACCATGCGGAAAGT          TCGTACGTCT TTAT AGATGTAAGG           CTGTTTAAACAAGAA  40 99
HC660_RS06310 1231371 .. 1231396 +  -2.1  -3.93769   CTGTTCACACTTACT         TTTTTATAG-TA TAA TACCTATAAAGA         TTCCTTTTTTAGAGT  52 105
         spx 1231879 .. 1231910 + -13.2  -4.60487   AATAGATCGCACGTT      AAAAAGAAGGCTGA GACA TCAGCCTTCTTTTA       TTTTTCAACCTGCTG 100 39
HC660_RS06325 NONE
        mecA 1233504 .. 1233525 +  -9.5  -5.88197   TTGCATCATAGCAGA           CCGATTTCT TGCC GGAAATCGG            TTTTTTTCTATTTCA 100 30
HC660_RS06335 1234871 .. 1234882 +    -3  -3.00145   TGAGAAGCACAAAAG                GAAA GGTT TTTC                 GTGTTTTTACTGCTT  43 88
        pepF 1236877 .. 1236901 + -14.4    -4.652   TCTTAATAAAAAATG          GCCTGTGCAT ATATG ATGCACAGGC          TTTTTAAAATCCTTT 100 35
HC660_RS06370 NONE
        yjbM NONE
HC660_RS06380 NONE
HC660_RS06385 1243141 .. 1243168 + -11.4  -5.36441   TAGGAATTATGTAAA        GGAGAGAATCAT TAAA ACGATTCTCTCC         TTTTTTATATGGGGC 100 27
HC660_RS06395 1246135 .. 1246158 + -11.8  -5.88565   TATGCCAATTCCAAA          CCACTTTTCC TTGC GGGAAAGTGG           TTTTTTTATTATCAG 100 222
        tenA NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG 1249531 .. 1249545 +  -6.4  -2.87132   AACGGCAAGCAGTCC               GGGAGA AGG TCTTCC               TGTATGACGGACAGG  57 4
HC660_RS06425 NONE
        thiD 1251392 .. 1251416 + -11.5  -4.02206   TAAAAATAAACCGAT          GAGACCACC TGCTTAT GGTGGTCTC          TTTCATGTTTGACTT  90 24
        fabI 1252323 .. 1252343 +    -9  -5.82036   CAGTTTCACCTTCAA            GCAGTCCC AAACA GGGATTGC            TTTTTTATTTCTTCT 100 42
HC660_RS06440 1253145 .. 1253170 +  -5.4  -5.08824   TAATGAAAGCAAAAA         GCTGCCCGGCA GATCG TTCCGG-CAGC         TTTTTTACATAGAGA  78 38
HC660_RS06470 1256506 .. 1256533 + -11.4  -5.42259   ATAGCCTGACCCTGA        CAAGAGACCGGA GATG TCCGGTTTTTTG         TTTTTTTAACAATGA 100 230
HC660_RS06475 NONE
HC660_RS06480 1257024 .. 1257062 + -14.7  -4.30477   TACTAAGAAATGAAT   GAAGGAGGAAGTACGGA TGATT TCCGTGCTTCTTCCTAC   TTTATGTATTCTTTG 100 35
HC660_RS06485 1257473 .. 1257493 + -14.7  -2.88452   TTTTACAGTGAAAAA            CCCGGCAGT ATC GCTGCCGGG            CTGTTTATTTGGGCA 100 66
HC660_RS06495 1260156 .. 1260175 +  -5.6  -5.71712   GATACGTATAAAAAA            CCGTTCAC ATGA GAGAGCGG             TTTTTTTATATGCGA  95 30
        metI NONE
        metC 1264564 .. 1264586 + -10.6  -5.65496   CGGTCCGTTAAAAAA           GAAGCCGG CGATAGC CCGGCTTC           TTTTTATTTTTCATC 100 30
HC660_RS06535 1266654 .. 1266670 + -12.3  -5.85244   GAATCATAGCTTAAA              CCCTTGC GTA GCAAGGG              TTTTTTATTTTGCTT 100 33
HC660_RS06565 1271901 .. 1271912 +  -4.4  -3.96216   TTCCTTTTCAAATCG                TCCA GAGT TGGA                 TTCTTTCCATACAAG  59 147
HC660_RS06575 1273523 .. 1273535 +  -3.5  -4.62803   AACAAAAACAGAAAT                TAATA CTC TATTA                TTTCTTGTTATTTGA  64 39
HC660_RS06580 1274226 .. 1274255 + -12.3  -3.67188   ATCTCAAATTTCTAA       GAAAAGCTCCC ACAGAATA GGGAGCTTTTC        TATTTTCACATCACT  90 293
HC660_RS06600 1277703 .. 1277741 + -13.3  -5.26316   ATGAATCGTAAATTG   CGCCCCAATTGTTAGAC AACGA GTTTAGCGATTGGGGTG   TTTTTTATAGCCTGA 100 30
HC660_RS06605 1278474 .. 1278508 +  -7.9  -3.33798   AAGGCTCTAAAATGA     CAAAAAGCTCTGTCC TTAGT GGATGGGGCTTATTG     TGTGTTTGTGACAAT  67 123
HC660_RS06610 1279378 .. 1279399 +  -5.2  -5.86332   TCTTGGTGTTGGGAA           GAGTCCTT ACAAAG AAGGATTC            TTTTTTTTGACTTAC 100 46
HC660_RS06615 1280665 .. 1280683 + -13.2  -5.11613   CATTACCATTACTTA             GCCCTTCT CAG AGAAGGGC             TTTTTTCAATAATCT 100 139
HC660_RS06620 1281206 .. 1281223 +    -7  -2.94806   TTTGCACAAGATTTA             GGCCAA TTGTTT TTGGCC              TGTCGTATTGATTGA  61 43
HC660_RS06625 1281562 .. 1281595 + -10.4  -5.65496   GGACTAATCATCAAG     CGGAGCTGACTCGA ATGAAC TTGAGTTAGTTCCG      TTTTTATTTTTCATC 100 34
HC660_RS06630 1282462 .. 1282486 + -10.8  -3.89448   AGGAAAATAGCTCAA          GAAAGCAGGT ATAGA GCCTGCTTTC          TTATATGTTTTTACA  86 31
HC660_RS06645 NONE
HC660_RS06650 1285505 .. 1285531 +  -6.6  -5.41143   AAGTTGTAGATATAT         CATCTCCTTGAA ACA TGCAAGGAGATC         TTTTTTTAAAAAATG  89 54
HC660_RS06655 1286536 .. 1286552 +  -6.6  -5.29782   TGAAAAATGTAAAAA              GCTTAC TAATT GTAAGC              TTTTTTATAAATGTA  88 191
HC660_RS06680 1290934 .. 1290964 +  -6.2  -5.95286   AAATAAATGTGGAAA      GGCTGTC-G-CGGG AAATG CCCGTTGGACAGCC      TTTTTTCTTTTTAAT 100 35
HC660_RS06695 1292775 .. 1292792 +  -4.7  -4.98616   TCGCTATAAGAAAAA             GCGTCAC GTCA GCGGCGC              TTTTTGATGTTTTGA  74 32
        fdhF NONE
HC660_RS06715 1297507 .. 1297532 + -16.1  -5.14563   GAGATTGACCACCCA         CCCGAGCCGGC TGCT GCCAGCTCGGG          TTTTTTGATGAAAAG 100 33
HC660_RS06720 1298350 .. 1298378 +  -3.2  -5.31275   ATTCCTTTATAAAAA       AGCACGTATTGCCC TCT GGG-AA-ACGTGCA       TTTTTTATAGTGAAA  75 40
HC660_RS06725 1299040 .. 1299066 + -16.8  -4.07885   TCGTATTTGATTAAA         CAAAAAAGAGCC GGA GGCTCTTTTTTG         TTTTACAAGACAATA 100 27
HC660_RS06735 NONE
HC660_RS06740 1302123 .. 1302173 +  -7.8  -5.86061   AAATCCGCTGTACCG CAGTAACATAAAAAACCGAAATCA ATT TGATTTCGGTTTTCTGTTTAAATG TTTTTTTTCATCCCG 100 20
HC660_RS06750 1303358 .. 1303381 + -14.6  -4.10612   ATAACCAGTACAAAA          GCCGCTTTCC AAAT GGGAAGCGGC           TTTGTCGTTATCCAT 100 37
HC660_RS06770 1306886 .. 1306915 +  -6.5  -3.49924   AACATTTATTTTTGC       GAATGATTGTGCA TGAA TTCACAATCCTTC        TTCTCATGCTTTCAA  63 265
HC660_RS06775 NONE
HC660_RS06780 1308655 .. 1308698 + -11.3  -5.74086   CTTTGTTGTGGTTCA GACATTGCC--AAAGCGTTCC TTTT GGGATGCTTTCCGGCAATGTC TTTTTTATTTAGTTT 100 43
        uxaC 1310264 .. 1310297 +  -4.6  -2.87211   ACGTATAAAAGAGGT     TCCGCTCAGAAT-AC CCTGC GTCAAACTGAGCGGA     TATCTCACCGAAAAT  48 33
HC660_RS06790 1311735 .. 1311745 +  -2.6  -2.74144   CAATCCTATATAGAA                 TATT TTG AATA                 GTTTGCAAGTAAAAA  42 46
        allD NONE
HC660_RS06800 NONE
        uxuA 1314946 .. 1314959 +  -5.3  -3.17229   GGCGAAAAAAGAGGT               GGAAT TATG ATTCC                TCTTCATCATCGGCT  54 16
HC660_RS06810 NONE
HC660_RS06815 NONE
HC660_RS06820 1318192 .. 1318213 +    -3  -4.06419   AATGTCACGACATGA           TGCCCCGTT TTTCC AGC-GGGCA           TTCTTTATACAGAAA  55 26
HC660_RS06825 NONE
HC660_RS06830 1321199 .. 1321236 + -18.7  -3.08966   GGGTGTGACGCTATA   ACAAGAAAGGCTATCCT GTAA AGGATAGCCTTTCTTGA    TTAAATCAGCTTTAA 100 25
        rapA NONE
        phrA 1324284 .. 1324307 +  -6.6  -5.80951   GATGATAACGAAAAA          AACCCCTCCG GTTG CGGAAGGGTC           TTTTTTATTTTAGCT 100 39
HC660_RS06855 1325500 .. 1325525 +  -9.8  -4.28656   ACTATAATGAAAAAA         GGAAGCTTCA CCTGAA TGGAGCTTCC          TTTTACATATTACAT  86 34
HC660_RS06865 1327124 .. 1327138 +  -3.6  -2.91912   ATAACTGCCTATTTC               TTCATA CGC TGTGAA               TGTGTGAATGCGTAG  47 49
HC660_RS06870 1328014 .. 1328041 + -14.8  -4.89009   TATTAATATCTATGC        CGGGCTGAGGGC AAAT GTCCCCAGCCCG         TTTTTGATTAGCTGT 100 35
HC660_RS06885 NONE
HC660_RS06890 NONE
HC660_RS06895 NONE
HC660_RS06900 1331176 .. 1331191 +  -3.2  -2.71364   TGACAGCCGGAAAAG              CGGG GCTGAATG CCCG               TGATTAAACAGCTGG  43 3
HC660_RS06905 NONE
HC660_RS06910 1331870 .. 1331918 + -15.6   -5.8187   CAAGACGGAAAGCCT GCGGACACTGATCAACATGCACAG CAT TTGTGC--GTTGATTGGTGTCCGC TTTTTTTATTGCATA 100 60
HC660_RS06915 1332512 .. 1332532 + -15.4  -4.42386   GAGCATGACACATAA            GCGGCCGG CATTA CCGGCCGC            TTTTATGAATAGAAA 100 75
HC660_RS06920 NONE
HC660_RS06925 NONE
HC660_RS06930 NONE
HC660_RS06935 NONE
HC660_RS06940 NONE
HC660_RS06945 NONE
HC660_RS06950 NONE
HC660_RS06955 NONE
HC660_RS06960 NONE
HC660_RS06965 NONE
HC660_RS06970 NONE
HC660_RS06975 1341749 .. 1341771 +   -15   -5.1861   TGAACAAGCCATACG           CAGACCTTTC TCA GAAAGGTCTG           TTTTTTAATGATGAA 100 48
HC660_RS06980 1342280 .. 1342316 +  -8.1  -2.88945   AAGGATGGGCATAAA   GAAGC-CGTGTATCTC TACTAT GCGATGCACGAGCTTC    ATTATTCTCCATCGG  66 43
HC660_RS06985 NONE
HC660_RS06990 NONE
HC660_RS06995 NONE
HC660_RS07000 NONE
HC660_RS07005 1349599 .. 1349617 +  -5.2  -5.33026   TAAAGTATAGACAAA             CCGCTTCG GCA TGAAGGGG             TTTTTATTTAGCTTG  79 31
HC660_RS07010 NONE
HC660_RS07015 NONE
HC660_RS07020 NONE
HC660_RS07025 NONE
HC660_RS07030 NONE
HC660_RS07035 NONE
HC660_RS07040 NONE
HC660_RS07045 1355431 .. 1355444 +  -3.8  -2.83345   AACCATTGCGATTGG               CCTC GGAAAG GAGG                TGATTCATATGTAAA  45 39
HC660_RS07050 NONE
HC660_RS07055 NONE
HC660_RS07060 1356936 .. 1356962 + -13.8   -5.5112   TGATGAAAGAACATA         AAAATCCCGGAG TTG CTCCGGGATTTA         TTTTTTCTTCCTCAA 100 38
HC660_RS07095 1362797 .. 1362819 + -14.9   -5.7946   ATATTGTGATTCTTT           GCCTTCCGG CGTCA CCGGAAGGC           TTTTTTTGTTCAAAA 100 45
HC660_RS07100 NONE
HC660_RS07105 1366205 .. 1366227 + -14.9  -5.03994   TGTCCTGACCAGAAA           CCCCTGTCC TTTAC GGACAGGGG           TTTTTATGTATCAAA 100 33
HC660_RS07120 1369007 .. 1369026 +  -7.2   -5.4251   CAGCAAAAGAAACAT            GAATCCTT GAAA GAGGATTC             TTTTTTATCTCTGAC  91 24
        dppA 1369939 .. 1369950 +  -4.4  -2.64099   CATGACTGAACTGGC                GATG CGAA CATC                 ATTCTCCTAAAGGGG  47 4
        dppB NONE
        dppC 1371858 .. 1371871 +  -2.4  -2.87463   TGCACTGGACCCTAA               GCTA AGGAGG TAGC                TGTATGGAGAAAGTT  41 13
HC660_RS07140 NONE
        dppE 1374550 .. 1374578 +  -5.4  -5.57729   CTGCGATTGAGAAAA       TACTGCTCTCTTT ATGT GAAG-GAGCGGTA        TTTTTTCTCTTATTT  86 43
HC660_RS07150 NONE
HC660_RS07155 NONE
HC660_RS07160 NONE
HC660_RS07165 1378569 .. 1378593 + -12.9  -4.82863   TGAGATAAATAAAAA          GCTGGCTCC GTTGTTA GGAGCCAGC          TTTCTTTTATGATTG 100 33
HC660_RS07180 1381313 .. 1381334 + -11.7  -5.66684   TTGGTAAACATGAAA           CCCAAAACA AATT TGTTTTGGG            TTTTTTTGTGCCTTC 100 34
        hmpA 1382769 .. 1382795 +   -16  -5.06451   TCTTAACATATACGC         GGCTCTTCTCAA ATA TTGGGAAGAGCC         TTTTTTAGGATAATA 100 35
HC660_RS07195 NONE
HC660_RS07200 NONE
HC660_RS07205 1385230 .. 1385268 +  -6.7  -6.09196   ACGGAGGGAAAAAAG  CCCGGGAGAGTCAAGCTC ATTA GAG-TCGACTGTCCGGGG   TTTTTTTGTTTTCGG 100 161
HC660_RS07210 1385643 .. 1385659 +  -2.9  -3.12847   TGATGAAAAAGGAGG              CGAGGCA TAA TGCTTCA              TTGGATCAGTTTATT  44 16
HC660_RS07215 1385973 .. 1385987 +  -2.9  -3.14647   ATTCTGTCATAAATT               GATTT TTATC AAATC               TTCAGTATAATGGAT  44 29
        purU 1386954 .. 1386968 +  -9.2  -5.60864   CTAGACTGCCAGGCG               CCCGCG TAA TGCGGG               TTTTTTTGATGTGTA 100 37
HC660_RS07225 NONE
        proA 1389683 .. 1389705 + -12.8  -5.26316   ATGTTCGATGAAAAA           GCTTATCTCG TAA CGGGATAAGC           TTTTTTGTGCGCTGA 100 48
HC660_RS07235 1390219 .. 1390246 + -12.1  -5.86061   TCGCTGAATAAAAAA        TGAGGATGCCT CACATA GGGCATCCTCA         TTTTTTTTGGTGCAG 100 30
HC660_RS07245 1391249 .. 1391270 + -13.1  -5.42259   TAAAATAATTTGCGG           CATCCTGAG AGTT CTCAGGATG            TTTTTTTGCGGATAA 100 33
HC660_RS07250 1392446 .. 1392470 + -11.5  -4.08181   CAGCGAATTAACAAA          GGATCAGGC CGTACAT GCCTGATCC          TTTAATATTCTTTTT  90 4
HC660_RS07260 1393708 .. 1393727 + -12.2   -4.4261   TTTCTAAAAGAAAAA            CCATCTGC ATCT GCAGATGG             TTTTCATCTTAAACA 100 34
HC660_RS07275 1398466 .. 1398486 + -11.2  -5.26316   ATCAATAATGAGAAA            GCCGCTAT TCAAC ATAGCGGC            TTTTTTATGAGGTAA 100 33
        ykoG 1403060 .. 1403085 +  -3.3  -3.98204   CATTAAGGGGTAAAT         GATGAAGCTGA AGAC TAAGATTCATC          TTTATACATCTATTT  55 28
HC660_RS07305 NONE
HC660_RS07310 NONE
HC660_RS07315 1405709 .. 1405724 + -11.8  -5.55664   GAATTAGACGACTAA              CCCCGC ACAC GCGGGG               TTTTTTTCATGATAA 100 26
HC660_RS07320 1405922 .. 1405940 +  -9.6  -4.97158   ACGCAAACAACAGAA             TAAGGGCT TAA GGCCCTTA             TTTTATTTCATCTGA  91 23
        mgtE 1407785 .. 1407841 + -15.5  -4.87665   TGCATTCATTCACTC ATTATAAACGATAAAAGTCCGTCTC AGATTGC GAGGCGGACTTTTATCGTTTATCGG TTTTTGTACCTAAAG 100 19
HC660_RS07335 NONE
HC660_RS07340 1408770 .. 1408795 +  -6.3  -5.99154   ATATCACCAAAAAAA         TCCTTATAC AAAATAAC GTATAAGGA          TTTTTTTGTTTCCTG 100 10
HC660_RS07345 1409394 .. 1409413 +  -8.6  -5.88197   TCGTTAGCCATTCCA            CACTCTCT TTCA GGAGAGTG             TTTTTTTATATTTAG 100 34
HC660_RS07355 1411163 .. 1411187 +  -2.2  -4.82855   ACCTATCAAACAAAA         GACTGATGC CATGGTCA GCA-CAGTC          TTTTTAAATTTGATG  64 20
HC660_RS07365 NONE
HC660_RS07370 1414932 .. 1414954 +  -9.2  -5.08601   CTGAAATAACACAAA           GAGCTGAC CGAATAA GTCAGCTC           TTTTTCTTCAGCTGA  91 37
HC660_RS07390 1421181 .. 1421207 + -12.4   -5.1287   ATTCATGTCTAGCAA         GACCTTTGCC TTATGTC GGCAAAGGTC         TTTTTTGCATGTCCG 100 184
HC660_RS07395 1422082 .. 1422103 + -13.1  -4.49756   GGGCTTAATCATAAA           GACTCTGCT GAAA AGCAGAGTC            TTTTCATGTTTGAAG 100 33
        sigI NONE
HC660_RS07405 1424696 .. 1424708 +  -5.5  -3.92324   TCTTCAAAATGGTGA                CGGAT AAG GTCCG                TTTCCTGTTCGACGA  63 495
        htpX 1426351 .. 1426370 + -12.2  -6.15717   AACCAAAACATCCTT            CCTCTGAG AACC CTCAGAGG             TTTTTTTTCTGTTTC 100 41
        ktrD 1427865 .. 1427881 +  -9.4   -5.4505   TATTGGATAATTAAA              CACCGC ATCTG GCGGTG              TTTTTTATTGCCAAA 100 31
HC660_RS07430 NONE
HC660_RS07435 1428349 .. 1428380 + -19.6  -4.33956   AACAAAAATAAAAAA      CACCTCTTAGGCGG AATG CCGCTTAAGAGGTG       TTTGTCTATTTTAAA 100 30
HC660_RS07445 NONE
HC660_RS07450 NONE
HC660_RS07455 1432818 .. 1432833 +  -3.2  -3.66876   ATCCCGTTCCTCTAT              CGGG ATATCAGC CCCG               CTTTTTACTTTTGTG  51 259
HC660_RS07475 1437452 .. 1437481 +  -8.7  -4.82154   GGACGAGAAACGAAA       CCTCTTTAGAC-GC ATT GCTGTTTGAAGAGG       TTTTTAATATGGGTT  88 182
        mtnW NONE
        mtnX NONE
HC660_RS07490 1440006 .. 1440019 +  -8.1  -3.05384   GAAACTGAAAACACT               CCAGC ATCA GCTGG                TTAAATAAAAGGGGG  67 4
HC660_RS07495 1440589 .. 1440610 + -12.3  -5.05505   CAATAAGAAGAAAAA           GCCCCGTTT ATAA AAGCGGGGC            TTTTTAATTTATCGT 100 35
HC660_RS07505 1441427 .. 1441447 +  -6.1  -5.60993   ATGCATATATAAAGA            GAGAGCTTT TCA GAAGCGCTC            TTTTTTTCTGGGAAA  89 53
HC660_RS07510 1442057 .. 1442067 +  -2.4  -3.98991   TTTACATACGACAAG                 CCCG AGG CCGG                 TTCCTTTTTCTTTAG  53 165
        mhqR 1444102 .. 1444128 + -11.7  -5.38348   TAATAAGTAAAAAAA         GGAAGCCTTGT GATAG ATAAGGCTTCC         TTTTTTACTATTTTT 100 31
HC660_RS07540 1449838 .. 1449855 +  -8.5   -5.9362   TATGTTTTTCTAGAG             CACCTTT CCGG AAAGGTG              TTTTTTTATATTTTA 100 313
        queC NONE
        queD NONE
        queE NONE
        queF 1452425 .. 1452444 +  -7.8  -5.72053   AATGTGTGACCACGA            TCCTCGCT TTTT GGCGGGGA             TTTTTTATTTGATTC 100 183
HC660_RS07565 1453756 .. 1453774 +    -6  -5.52384   GGAAACAGATGCGAA             CGCCGATT TAT AATTGGTG             TTTTTTTGATGAAAA  89 13
HC660_RS07575 1454437 .. 1454458 +  -9.5  -4.96762   GCCAAGAAGCTAAAA           GGTTTCTCA TTAG TGAGAAGCC            TTTTTATCATATATG  91 28
HC660_RS07580 1455358 .. 1455388 +  -6.1  -5.93809   GTCTTTGCCATATAA       GCATAGAAGAGAC CATTC GTCTCAGCTGTGC       TTTTTTTTATAGAAA 100 26
        ykvU 1456820 .. 1456832 +  -3.3  -2.60615   AAGGATGATAAATCT                CTAGC GGG GCAAG                CTATTTGAAAAGCAT  43 33
HC660_RS07590 1457363 .. 1457384 +  -6.6  -5.34555   TGGACGAAAGAATAA           GCTGAGAG CGTAGC CTTTCAGC            TTTTTTGTCATATAA  89 26
HC660_RS07595 1459522 .. 1459543 + -10.1  -5.64274   TTTTAAAATAAAAAA           CAGCGGTCC AAAT GGACAGCTG            TTTTTTTATGGATCA 100 30
HC660_RS07605 1461029 .. 1461074 +  -9.3  -3.64822   TGCCGTAACAAGGCA G-AGATAAAAAAGGACTTTGTT CTC GACATCGTCCTTTTTTATCTGC TTTAAATAAAAAAAT  78 33
HC660_RS07610 1462253 .. 1462264 +    -3  -2.66695   TTGATTACCGTCTCA                TTGA AAGA TCAA                 CTGTTTAGTGAAAGC  41 6
        glcT 1463266 .. 1463282 +  -4.4  -4.17048   ATTGAGGGGAAAAAA              CGGGAA GTCCA TTCTCG              TTCTTTTGCGCACCC  61 91
        ptsG 1465545 .. 1465572 + -12.8  -2.98986   AAGGGTATATAGTAC        GCTGTGCTTGTC AGAT GACAAGTACGGC         TGTATGATATAATAT  91 39
HC660_RS07625 NONE
        ptsP 1467619 .. 1467642 + -13.2  -5.88471   AGTAATGCGCAAAAA          CCAGAC-GGCC TCC GGCCTGTCTGG          TTTTTTTTCATAATC 100 36
        splA NONE
        splB 1469053 .. 1469075 +  -8.4  -5.14563   AATATTTCACGTAAA           CGGGCTGTCA GTT TTACAGCTCG           TTTTTTCATAAAAGG  91 27
HC660_RS07650 1471871 .. 1471894 + -10.4  -5.50313   TATAAATATTGGATA          CCCAGAACTT TTTC AAGTTTTGGG           TTTTTTCATTTTCTA 100 36
HC660_RS07655 1472867 .. 1472894 + -17.2   -5.4593   TGGGTGAAATAAAAA        GAGATTGCCTGT CAAA ACAGGCAATCTC         TTTTTATTATTTTCC 100 29
HC660_RS07665 1476143 .. 1476170 +  -7.8  -4.72007   GAAAAATAAAAAACA        GGGTGCACA-TCT GAC AGATTGTGTGCCC        TTTCTTTTACTCAAA  84 32
        kinA 1478122 .. 1478141 +  -9.3  -4.11404   TCCAAAAAAATAAAA            CAACGGC TTAAAC GCCGTTG             TTTATATCGTCTGCA  82 28
HC660_RS07685 1481139 .. 1481155 +  -3.7  -3.98231   TTTCTTTCATGCCGA              CGTATTG TTG CAATAGG              TGTTTTGCTTTTGTT  57 370
HC660_RS07710 NONE
HC660_RS07715 1486617 .. 1486630 +  -8.1  -5.97575   ATGGTTTGATTTAAA               CGGCT GAAG AGCCG                TTTTTTTTATGAATT 100 27
HC660_RS07725 1488036 .. 1488046 +  -6.8  -3.85698   AAGATGTGATGGAGC                 GGCT TAA AGCC                 TTTATCCGAAAGGAC  67 202
        abbA 1488835 .. 1488855 +  -6.9   -5.4505   GAACACTTTATAATT            GATACTCCT CCA AAGAGTATC            TTTTTTATTGAGGAA  91 43
HC660_RS07740 1489396 .. 1489411 +  -5.4  -5.66338   CGCTCATTGAACAAG              TAGGCT GCTC GGCCTA               TTTTTTATTATATTT  86 23
        ccpC 1490433 .. 1490449 +    -8  -5.96894   CATTTTAAGAGAAAA              GACAGC ACAAG GCTGTC              TTTTTTTATTTACAT 100 33
HC660_RS07750 NONE
HC660_RS07755 NONE
HC660_RS07760 1492356 .. 1492366 +  -4.6  -2.80816   ATTTGCTAGAAAAAG                 CGGC TGT GCTG                 TCTGATAGATGCAAA  48 10
        dapD 1493207 .. 1493229 + -14.2   -3.7732   TGATTTGATCAAAAA           GGCGTGGATG ATA TATCCACGCC           TTATTCGTATAGGCA 100 45
HC660_RS07770 NONE
HC660_RS07775 1494693 .. 1494716 +  -9.6  -4.99312   GAATTCAGTAAGTAA          AAACCGAAGC AAAA GCTTCGGTTC           TTTTGTTATTCTGTT  91 30
HC660_RS07785 1496337 .. 1496356 +  -8.6  -4.75308   AGAACGAAAGAAAAA            GGTCTAAC ATTC GTTAGGCC             TTTTTGACTCTTACT  88 50
        ykuV 1496871 .. 1496885 +  -5.7  -6.23545   GCGCAAATAAAAAAA               CCTGA GGTTA TCAGG               TTTTTTTTATTTACG 100 45
         rok 1497901 .. 1497921 +  -9.8  -5.95946   AAGCACACAGAAAAA            CTGCTTGA AGAGC TCAAGCAG            TTTTTTTATTATTGG 100 39
HC660_RS07805 NONE
HC660_RS07810 NONE
HC660_RS07815 NONE
        mobB NONE
HC660_RS07825 NONE
        moaD 1503193 .. 1503216 + -15.3  -4.74103   AGCGGGGGATGAAAA          CCGGACGGC GATAAA GCCGTCCGG           TTTTTGCGTTAGAAG 100 29
HC660_RS07835 NONE
HC660_RS07840 NONE
        yknW NONE
HC660_RS07850 NONE
HC660_RS07855 NONE
HC660_RS07860 1510848 .. 1510867 + -12.2   -5.2189   CTGCGTTACGAGTAA            CCTCATGC ATAT GCATGAGG             TTTTTTAATGCTTGG 100 26
HC660_RS07865 NONE
        pfkB NONE
HC660_RS07875 1514717 .. 1514738 +  -8.7  -5.09685   AAAATAAGGAAAAAA           GCGTCCTGT TACT AAAGGACGC            TTTTTCTCTATCTTC  91 34
        lepB 1515436 .. 1515463 +   -12  -5.26875   CAAACCAAATAAAAA        CGCCTTGCTGGCC TTT GGACAGCA-GGCG        TTTTTTAATTGGAAA 100 29
HC660_RS07890 1517549 .. 1517564 +    -9  -5.96219   ACGCGTAATAAAAAA              GCAGAG AATT CTCTGC               TTTTTTTTGTACATA 100 33
HC660_RS07895 1518510 .. 1518537 + -17.2  -4.07568   TATGAAGCAGAAAAA        TAAGAAGGAGGC GAAA GCCTCCTTCTTA         TTTTAAAAAGCCCAA 100 23
        abhA 1521700 .. 1521721 +  -5.2  -5.47218   TAATATATGTTAAAA           GGCGGA-AT GTGTA ATCTCCGCC           TTTTTTTGCGTGCCA  82 38
HC660_RS07920 NONE
HC660_RS07925 1524001 .. 1524019 +  -2.4  -2.71144   GAATTCGCTGCCAAA             GGGTTGAT GAA ATTAACAC             TGCTTCAAAAGAATA  40 19
        ktrC 1524757 .. 1524772 +  -8.2  -5.30189   TAGAAGAAATATAAG              CCGTCC TTAG GGGCGG               TTTTTTCATATTATC 100 38
         ade 1526639 .. 1526662 + -11.1  -5.42259   CACTGCAATAAAAAA          GATGCACTC CTAAGT GAGTGCATC           TTTTTTTAAACCTCC 100 30
HC660_RS07950 1529708 .. 1529740 + -12.7  -5.08255   GTCTGCTAAAATAAA      AAAGCGGCTGGCACT TAG AGTGTCAGCCGCATA      TTTTCTTTTAGCGGT 100 27
HC660_RS07965 1531451 .. 1531470 +  -7.9  -5.55698   CTATCACATAAAAAA            GAGCTGA CTATGA TCAGCTC             TTTTTTTAAATTCTA 100 19
        pdhA NONE
        pdhB 1534024 .. 1534038 +  -2.8  -3.69434   ATATGTGTTTTCAAT               GCTTAC GAT GTAAAC               TTTAAAATTGCTTAA  49 88
        pdhC NONE
        lpdA 1536836 .. 1536869 + -13.3  -3.24755   ATAGAGATAACATAA     AAAAACAGCCC-CGCT GTA AGCGAGGGCTGTTTTC     CTTTATTTAGACAGT 100 40
HC660_RS07995 1537804 .. 1537824 + -16.9  -5.09521   GAAGAGTAAGAAAAA            GCATGCGGC TTA GCCGCATGC            TTTTTGATTTATTGA 100 32
HC660_RS08005 1539766 .. 1539789 +  -7.5  -5.39755   GATGTAAAAGGAAAA          GAGCCGG-AT GAAAG ATCCCGGCTC          TTTTTTATGCTTGTG 100 34
HC660_RS08015 1540876 .. 1540895 +  -5.7  -4.65895   AAGCTATAGTAAAAA            CGAACCG CGTGAA TGGTTCG             TTTTTACGTGAGAAG  72 42
HC660_RS08020 NONE
HC660_RS08025 1542234 .. 1542262 + -13.3  -4.25104   GTAAAGCCTTTAGTT        TAAGCTGCCGT ATACATG ACGGCAGCTTA        TTTTCATGCACAAAA 100 23
HC660_RS08045 NONE
HC660_RS08050 NONE
HC660_RS08055 NONE
HC660_RS08060 1548788 .. 1548814 + -10.2  -4.72029   TGATCTAAAGGAAAA        GCGCTTG-CCG GATTGA CGGACAAGCGC         TTTTATTACATTAAG  91 33
        typA NONE
HC660_RS08080 1552219 .. 1552239 + -11.2  -6.19302   CAAAATCATGAAAAA            GACTCAGC ATCTC GCTGAGTC            TTTTTTTTATTCTGT 100 30
HC660_RS08095 1554873 .. 1554894 +  -6.5  -4.57341   AAATACGCATTGTGA           TGCAGAGCT GAGC GGCTCGGCA            TTTTTCAGCACACTT  76 219
        glsA NONE
HC660_RS08110 1556591 .. 1556613 +  -4.2  -5.60993   AAATAAATGATAAAA           CTCAAACT AATTAAC AGTTTGGG           TTTTTTTATAACCGC  84 35
HC660_RS08115 NONE
         pyc 1561524 .. 1561549 + -13.5  -5.14563   AAGCATAATCAAAAA         GAGTGTATATC AGCT GATATACACTC          TTTTTTAGTGAAGAA 100 33
HC660_RS08130 1564188 .. 1564203 +  -3.3  -2.90496   ACATAGATGGCATTT              TGAGT AAAAAA ACTCA               TAATTTAAGAGAAGA  45 140
        coxB NONE
        ctaD NONE
HC660_RS08145 NONE
        ctaF NONE
        ctaG 1569164 .. 1569187 +  -8.2  -5.52096   GACGATACCATAAAA          GGTACAGC GGCAATTG GCTGTACC           TTTTTTATTACATTT 100 28
HC660_RS08165 1570213 .. 1570224 +  -4.4  -2.53015   GACATGCAATTCACA                TCAC GGGG GTGA                 TAGATTGAAAAATAT  47 95
HC660_RS08170 1571272 .. 1571299 + -15.6  -4.63048   TAAACGCTGATAGAT        CAGCCGCGG-GCC ACA GGTACCGCGGCTG        TTTATTGTTTCTGCA 100 31
HC660_RS08175 NONE
HC660_RS08180 1572361 .. 1572376 +    -9  -4.96646   GACAAAAGATTAAAA              GACCCA AAAA TGGGTC               TTTTTCATTGTGTAA  91 28
        ricF 1572934 .. 1572954 + -11.2   -4.2349   GATGCAAAGTGTCAT            GACGAGAC TGGCC GTCTCGTC            TTTTACATATAAGAG  88 24
HC660_RS08190 1573277 .. 1573296 +   -15  -2.96822   GCTGTATAAAAAAAT            CCCCGCAG GTTT CTGCGGGG             TCCTTCTATTCCTTA 100 40
        rsmD NONE
        coaD 1574625 .. 1574647 +  -5.6  -5.83226   GAAAAATTCAGACAA           GGATGAGT GTTTTGA GCTCATCC           TTTTTTTGTTCCGTT  95 20
HC660_RS08210 NONE
HC660_RS08215 1577849 .. 1577871 + -16.4  -5.00895   TAAGCTGAAAGCGAA           GAGCACCTGA AAT TCAGGTGCTC           TTTTTATATGCTCAA 100 16
HC660_RS08225 NONE
        rpmF 1580058 .. 1580079 + -15.9  -5.89659   TAACTAATTAGAAAA           GCGCAGGGT GAAA ACCCTGCGC            TTTTTCTTTTTTTCT 100 34
        gerR 1580793 .. 1580818 +  -8.9  -4.27742   AACCCTCAAAATGAA         CCGGCCCTAGA GTCA TCAAAGGCCGG          TTGTTTCATTTTTAT  83 43
HC660_RS08245 NONE
        bshC 1584077 .. 1584093 + -10.9  -6.32216   TAAAGTTTTAAAGAA              CCCTGAA TAG TTCAGGG              TTTTTTTTTATGTGT 100 43
        mraZ NONE
        rsmH NONE
        ftsL NONE
HC660_RS08270 1588172 .. 1588199 +   -15  -5.76633   CTGATTAAATAGAAA        GAAAGCTTACCC TGTT GGGTGAGCTTTC         TTTTTTTCTATCTCC 100 33
HC660_RS08275 1590221 .. 1590244 +  -8.9   -3.8165   AGATGAAAAAAAGGA          GGCAG-CCGA TTAAT TCGGGCTGCC          TATTATTTTATTGCA  76 13
HC660_RS08280 NONE
HC660_RS08285 NONE
HC660_RS08290 NONE
       spoVE 1595548 .. 1595579 + -13.2   -3.7511   GGGAAACAATTGATG      CGATAACCCTGT CCATAAAA ACAGGGTTATCG       TTATGTTATAGAGAC 100 82
        murG NONE
        murB 1597698 .. 1597723 +   -12  -4.13767   ACTGTAAGCAAACGA         CAAACGGCAT CATAGT ATGCCGTTTG          TTTTGGAATAGGCAG  95 75
HC660_RS08310 NONE
HC660_RS08315 NONE
HC660_RS08320 NONE
HC660_RS08325 NONE
        ftsA NONE
        ftsZ 1603057 .. 1603082 + -14.9  -6.04324   CGCGGCTAATTGAAA         GGACAAAATCG TTTT CGATTTTGTCC          TTTTTTATTTTTTCC 100 32
HC660_RS08340 1607673 .. 1607690 +  -9.1  -5.76633   GTAAGTGTAAAAAAA             GCTGCCG CCCT TGGCAGC              TTTTTTTCTATATAC 100 37
     spoIIGA NONE
        sigE 1609589 .. 1609604 +  -4.7  -2.77233   TTTTGCGGGTTAATC              CCTTG ATTCTA CAAGG               ATTTCCCAATTATGA  50 46
        sigG 1610500 .. 1610538 + -17.8  -3.34398   CAATAGCATGGACGC   GGAAAGCCTTTAAAACAG AAA TTGTTTTAAAGGCTTTTC   TATTTAGAACGAGCG 100 35
HC660_RS08360 1611587 .. 1611610 +   -14  -5.47159   TGCTTTCTTTATTAA          GCCGTTTCAT GAAT ATGAAACGGC           TTTTTTCTATTAAAA 100 172
HC660_RS08365 NONE
HC660_RS08370 1613273 .. 1613300 +    -7  -3.07915   GCCGCTGATTGTCAA        ATGCCGGAAG TCTGAACT CTTCCGGCAC         ATTTCATTTATGAAA  62 48
        pgeF NONE
HC660_RS08380 NONE
HC660_RS08385 1615387 .. 1615412 +    -2  -2.83103   GAAGACGATCAGAGG         TGGTAAAGCGA GATGA TC-CTTTATCA         AGTTTTTTCGGTTTT  41 20
HC660_RS08390 1615687 .. 1615710 + -14.6  -3.64703   GGTGACAGTTTGATA          GGGGCTTGGC TGCT GCCAAGCCTC           TTTACATAGAAGGGA 100 41
HC660_RS08395 1616494 .. 1616508 +  -4.2  -3.55072   AGAGTCACGTTTGAA               CGACAA AAA TAGTCG               GTTTTTCAGTTTTTT  55 14
      divIVA 1617368 .. 1617397 + -12.9  -6.14618   GGTACCGCGAGATAA       GCTTTCTCGTCCC TTAT GGGATGAGAGGGC        TTTTTTTATTTTCTG 100 299
        ileS 1620209 .. 1620228 + -12.1  -5.60993   AGAATTAATGAAAGA            GCCCGGC GCACAA GCCGGGC             TTTTTTTGTGCCAAG 100 33
        ylyA NONE
        lspA NONE
HC660_RS08420 1622328 .. 1622353 + -14.1  -5.56673   GCACCTTGTCCTAAA         CCCCTCTCTGCC AAT GGCA-AGAGGGG         TTTTTTCTTCTAAAT 100 147
        pyrR 1623020 .. 1623046 +  -8.9  -5.63504   GCCGGTCTTTGTATG        CCTCTTTGCGTA AAAA TA-GCAAAGAGG         TTTTTTTATACAGTT 100 111
HC660_RS08430 1624498 .. 1624521 +  -8.9   -5.4477   CTCTATTTAACCGTA          CCCCGAGTCT ATCCA AGAC-CGGGG          TTTTTTTCAGCCTTT 100 106
HC660_RS08435 NONE
HC660_RS08440 NONE
        carA NONE
        carB NONE
        pyrK NONE
HC660_RS08460 NONE
        pyrF NONE
HC660_RS08470 1634101 .. 1634116 +  -6.8  -5.84381   TGCCACGATTGAAAA              CAGGCC TTTG GGTCTG               TTTTTTTATTAATCC 100 68
HC660_RS08475 NONE
        cysP NONE
         sat NONE
        cysC 1638039 .. 1638053 +  -3.4  -3.80733   AGCAATTGAGCTAAA               CGCCGC TCA GCTGTG               TTCTTCTCAGATGCC  53 27
        cobA NONE
HC660_RS08500 NONE
HC660_RS08505 1640169 .. 1640191 + -16.4  -5.02323   AGAAGAAAGAAATAA           GCCAGAGCAT ACA ATGCTCTGGC           TTTTCTTTGTGCTGC 100 26
HC660_RS08515 1644735 .. 1644757 +  -8.5  -5.07652   ATGATATAATCTTAG           GGGTAATAG CATGT CTATTGCCC           TTTTATTTTGAGAAC  91 47
HC660_RS08520 1645716 .. 1645727 +    -3  -4.07568   CTTGCTAGGTTAAAC                TAGA GACG TCTA                 TTTTACAGGGGGAAC  55 68
        remA NONE
         gmk NONE
HC660_RS08535 1646858 .. 1646884 +  -9.6  -5.48825   GAATAGTAGCACAAG         TAGCAACCTATA TCA TGTAGGTTGTTA         TTTTTTTCCGTGCTG 100 35
       coaBC NONE
        priA NONE
HC660_RS08550 NONE
HC660_RS08555 NONE
        rsmB NONE
        rlmN NONE
        prpC NONE
        pknB 1657179 .. 1657194 +  -3.2  -2.77013   AACAAGGAGGGAAAA              TATGCC TGAG GGCAAA               ATTATTAAAGCGCTA  44 39
        rsgA NONE
HC660_RS08585 1658753 .. 1658778 +  -4.7  -4.84527   AAGCAGCACGAAAAA         GAGC-CGGGC GCATCTA GCCTGAGCTC         TTTTTCCTGTATCCA  72 39
HC660_RS08590 NONE
HC660_RS08595 1659661 .. 1659685 +   -10  -3.85542   TTCACCACATAAAAA          CGCCTGCC ACATATCAG GGCAGGCG          TTCATTTTGTTATAC  81 64
HC660_RS08605 1660501 .. 1660521 +  -2.4  -2.71144   AATATTTATGTCCAA            GGGGTACG AGTGA CGAACCCG            TAGTTAGGAGGAGTA  40 2
HC660_RS08610 1662193 .. 1662221 + -19.1  -3.68394   TATATCGTTTCTGCA        GAATAGAAGGGCA AAT TGCCCTTCTATTC        TTATGTCTGCTTTTA 100 20
       sdaAB NONE
       sdaAA NONE
        recG NONE
        fapR NONE
        plsX NONE
        fabD NONE
        fabG NONE
        acpP 1669694 .. 1669705 +  -7.2  -4.25458   TCCCGCCGAAACGCG                GGGC TTTA GCCC                 TTTATTCGTGCAGTT  76 55
        rncS 1670556 .. 1670577 +  -8.7  -3.78962   TACGAAACAATAAAA           TCCCCCTAA GCTA TAAGGGGGA            TTTCAGTATGTTTGC  76 28
         smc NONE
        ftsY 1675253 .. 1675277 + -11.4   -5.2291   CCGATTATAGACAGA          CAGCCCCCAA AACCC TAGGGGGCTG          TTTTTGTTATCGTCT 100 55
HC660_RS08675 NONE
         ffh 1677636 .. 1677656 +    -4  -3.61398   TACCTTTTATGTAAT            CGGTTATA CATGA TAAAACCG            TTGTTAAGAAAAAAC  53 27
        rpsP NONE
HC660_RS08690 1678261 .. 1678281 +  -3.9  -5.40072   ATATTTGACTAAAAG            GGAGAGG GCCGGCA CCTCCCC            TTTTTTTACACGCAA  79 29
HC660_RS08695 1678753 .. 1678765 +  -5.5  -2.62184   AACAGTAATTGAAAT                TCGCC AGA GGTGA                TCATATGACAAAGCG  51 13
        rimM NONE
        trmD 1680024 .. 1680045 +  -2.3   -3.4178   GGGAAAAAGAATAGA           TTTTATTGC ATAG GCTATGAAA            TTGTGATAAGATACT  46 27
        rplS 1680526 .. 1680549 + -12.6  -5.71712   GATAACGAACGAAAA          GAGCTTGTTA CCAG TAACAAGCTC           TTTTTTTATATAGAA 100 42
        ylqF 1681500 .. 1681527 + -17.2  -5.14563   GAACAGCCGACGATG        TAAAGACCCGCA GAAA TGCGGGTCTTTA         TTTTTTCCTGACCCG 100 23
HC660_RS08720 NONE
HC660_RS08725 NONE
HC660_RS08730 NONE
        sucC NONE
        sucD 1686645 .. 1686673 + -16.1  -4.34402   AAACACATTAATAGA        GAAGGAACAGCCA TCT TGGCTGTTCCTGC        TTTTGCTGTCAAAAG 100 30
        dprA NONE
        topA 1689868 .. 1689889 + -10.9  -4.21954   AACCACAGAAGTAGC           GGTGAGCAG GGTC TTGCTCACC            TTCTTTGTGTGTTAA  88 27
       trmFO 1691296 .. 1691308 +  -5.5  -3.38046   TACCATTTAAAAGCC                CTTCC TGG GGAGG                TATTTGGCATGGAGA  56 72
        xerC 1692229 .. 1692244 +  -6.2  -3.02856   GCTTTTAAGAAAAAT              TAAAGG AGGC CCTTTA               TGTCATCTTTTCATG  56 23
        clpQ NONE
        hslU NONE
        codY 1695037 .. 1695058 + -10.9  -5.15969   CATTAATGAACAGAA           GAACCCCTT AAAA GAGGGGTTC            TTTTTTGCATTCAAA  93 35
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG 1699250 .. 1699264 +    -5  -2.69964   GCAAGAGGCGGAGGA               GACGAT ATT ATTGTC               TAATATCATTAAACA  49 8
        fliH NONE
        fliI NONE
        fliJ 1701767 .. 1701781 +  -2.8  -2.62184   TTTATGATTCAAGGC               CATTAG GAG CGAATG               TAATGTCCGGCAAAA  41 20
HC660_RS08820 NONE
HC660_RS08825 NONE
        flgD 1704276 .. 1704286 +  -5.4  -3.24924   CGGCGAATGTCATGT                 CTGT GGG ACAG                 TCTTCTAAATAAAAA  56 3
        flgG 1705120 .. 1705147 +  -9.8   -3.8823   TAAACGTTAAGGAGG        GAGGGGAGGCGA GTAA TCGCTTCTCCGC         TGTTTTATGATTAAA  83 31
HC660_RS08840 NONE
        fliL NONE
        fliM NONE
        fliY 1707971 .. 1707983 +  -2.7  -2.56864   AGGAGAGAGAAAAAA                TTATG GCA CATAG                AATTTTAATTGTAGA  41 50
        cheY NONE
        fliZ NONE
        fliP 1709648 .. 1709660 +  -4.1  -3.08522   ATTTAATTGTGAAAT                CTTTG CTT CAGAG                CTTTTAGGGTAGGTG  48 6
        fliQ NONE
        fliR NONE
        flhB NONE
        flhA NONE
        flhF 1714972 .. 1714987 +  -3.2  -2.71712   GAGTTTGTAGGGATG              CTGTGC AGAT GAACAG               ATTTGACCAAGCAGC  43 14
HC660_RS08900 NONE
HC660_RS08905 1716943 .. 1716964 +  -4.5  -2.67058   AAAAAAGAGAGGGTG           TGATTCAAA TGGA TATGAATCA            ATATTTAGATGTCTT  47 23
HC660_RS08910 NONE
HC660_RS08915 NONE
HC660_RS08920 NONE
HC660_RS08925 NONE
        sigD NONE
HC660_RS08935 1721999 .. 1722011 +  -4.8  -3.28924   TTTATGCAGAGGGTG                CTGC AGGCG GCAG                TTCTGCACAAAAATG  54 98
        rpsB 1722822 .. 1722850 + -12.6  -5.00616   GTAACCTATTCAAAA        GGTGATAAGAGG GACTG CCTTTTATCACC        TTTTTTCAAGAAAAA 100 37
HC660_RS08945 1723836 .. 1723860 + -13.7  -4.61633   TCTTTTCAGGCAGTA          TAGGGGACACA CTT TGTGTTCCCTA          TTTTTAAAACTATAT 100 70
HC660_RS08950 NONE
         frr 1725246 .. 1725282 +  -2.4  -3.29038   TACAATAGATAATAG    TGAAAAGACCCTCT CATGTTTAC AGGGGGTTTTTTTG    TTAATACTGTTGATT  45 53
HC660_RS08960 NONE
HC660_RS08965 1726932 .. 1726948 +  -6.7  -2.87026   TACTTTCTGCTTGCC              CTTTTTT CAT AAAAAAG              TCTAATATGAATATG  57 14
         dxr NONE
        rseP NONE
        proS 1731202 .. 1731232 + -12.7  -2.77414   TAAAATAGAAATAAT       AGAAGGTACCTCA TTGCC TGAGGTACCTTCA       CTTATGATGTTTTTA  90 70
HC660_RS08985 1735590 .. 1735613 + -12.6    -4.431   TTTTAGCATATAAAA          GCAGAATTTC TTAA GAAATTCTGC           TTTTATGCATACATG 100 35
        rimP NONE
        nusA NONE
        rulR NONE
HC660_RS09005 NONE
        infB NONE
HC660_RS09015 NONE
        rbfA 1740953 .. 1740979 + -10.9  -4.54477   TGAATAACAAATGAA         GAGGATAGGCG TTCGT CGTCTGTCCTC         TTTTCTGCGTTTTAA  90 34
        truB NONE
        ribF 1742945 .. 1742957 +  -3.5  -3.43773   TGCAGCGCACACAAA                TTTTA ATC TAAAA                TATTTGCATATAGGC  49 43
        rpsO 1743363 .. 1743378 + -10.4  -5.36965   CGATAATCGTAAAAA              GCGGGA GGAT TCCCGC               TTTTTTATCGTATTA 100 35
         pnp 1745657 .. 1745679 + -11.2  -4.66535   AATGAAAACATAAAA           GGAGCCTGGG AGA CCCCGGCTTC           TTTATTTTGACGCTT  90 40
HC660_RS09045 NONE
HC660_RS09050 1747994 .. 1748018 + -11.4  -5.77632   CATCATAAACCGAAA          TGCCTGCCCC AAAAC GGAGCAGGCA          TTTTTTTATCCTTTT 100 33
HC660_RS09055 1748375 .. 1748395 + -15.5  -5.71712   ATGAAAACATCCAAA            CATCGGCTG AGT CAGCCGATG            TTTTTTTGTGTGAAA 100 79
        dpaA NONE
        dpaB NONE
         asd 1751204 .. 1751237 + -12.6  -3.08996   TCCCAAGTGCGAATA     GAAGAGAGTAAGGCG CAAAT CGCCT-GCTCTCTTC     TGTTACGTCCGAATA  91 52
        dapG NONE
        dapA 1753414 .. 1753444 +  -5.4  -4.35091   ACAGTGAAACAAACG       CGGTCATTCTCA TTCCACC TGAGTTTGACCG       TTTCTTATACATATT  68 53
HC660_RS09085 1755240 .. 1755265 + -11.3  -5.52909   AGTCTAATGGAAACG         T-AAGACCGGAG CTG CTCCGGTCTTTA         TTTTTTTGCCTGTTA 100 34
        tepA NONE
        tepJ 1756354 .. 1756372 +  -7.4  -4.38203   TCCTACAGAAAAAAT             GCAGCC AGTTAAC GGCTGC             TTTCTTCATTATGTA  78 86
HC660_RS09100 NONE
HC660_RS09105 1759655 .. 1759675 +  -6.1   -5.8187   TAAACGATTCTAAAA            CAGACGCCT GTG ATGTGTCTG            TTTTTTTATTGCCTG 100 28
HC660_RS09110 1760985 .. 1761003 + -11.8  -5.52384   AGAAAAAAACTTAGG             GACGGTTT GAC AAACCGTC             TTTTTTTGCTGAGAA 100 16
HC660_RS09115 NONE
HC660_RS09120 1763819 .. 1763840 +    -8  -4.82901   CTAAATCTTAACATG           CATCCCTC CAATGT GAGGGGTG            TTTTTCTGCGGAAAG  84 30
HC660_RS09125 1764633 .. 1764645 +  -4.9  -2.53876   TTCTTTTAAGAAGGA                CAAAA TAA TTTTG                TAACTTCACATGAAA  49 63
HC660_RS09130 1764936 .. 1764955 +  -8.6  -5.63645   AGCACTCATTAAGAA            GAGAGGAG ATTC TTCCTCTC             TTTTTTATGTTTTCC 100 29
HC660_RS09135 1765836 .. 1765846 +    -4  -4.66833   GATCAATCCGGGTTT                 TCAA GCT TTGA                 TTTTTAAAATTGGAA  66 8
HC660_RS09140 1766777 .. 1766798 +  -4.5  -4.65916   TAAAAAGGAAGAAAA           GTCATCT TAATCACC AGATGAC            TTTTCTTCACGTCCG  68 16
        pgsA NONE
HC660_RS09150 1768773 .. 1768786 +  -3.1  -3.86307   GGCCAAGAAAAAATC               CGAAT ATGC GTTCG                CTTTTTTCTTGGCAA  53 112
        recA 1769935 .. 1769954 + -12.2  -6.14618   TGAAATAATAAAAAA            GGCAGAGT GCAA ACTCTGCC             TTTTTTTCTTTTGTA 100 55
HC660_RS09160 1771366 .. 1771382 +  -4.5  -2.80715   GTATTTCCGACACAA              TTACAAT GAA GTTGTAA              CATTTGTTTTTTTAA  48 134
         rny 1773104 .. 1773130 + -12.5  -5.41143   GTAGAGTATGCAAAA         TAAAGTGATGC GCTAA GCATCACTTTA         TTTTTTTGACGGCTG 100 23
        ymdB 1774108 .. 1774129 +  -5.9  -2.66711   AGCAACATCTAATAA           TGATTGTTC TAAT GAACACTCA            CTTATCCATTGTAAA  54 171
       spoVS 1774440 .. 1774468 + -16.9  -5.10877   AAAATAAAGTATTCA        CAACCTGTTTGCA TCC TGCAAGCAGGTTG        TTTTTCGTTTATTGT 100 43
         tdh NONE
HC660_RS09185 1776922 .. 1776945 + -13.2  -4.04141   GCTTCAACTATTGTA          GGGAGAAGGG AACA CTCTTCTCCC           TTTCATTCCTTATTG 100 25
        miaB NONE
HC660_RS09195 1779031 .. 1779053 +  -6.3  -5.80817   CTGTTCTCTTTAAAA          CACGGTGCCT TTTC AGGC-TCGTG           TTTTTTTATGTTGAA 100 28
        cotE 1779834 .. 1779863 +  -9.3  -5.71712   CTGAAGAATAAAAAA       GAGACTAGGGG AGTCGGTA CCCCAAGTCTC        TTTTTTTATATAGAC 100 30
        mutS NONE
        mutL 1784496 .. 1784526 +    -4  -6.19302   CTATGCATTTTTCAA       GCATTGAGATATTC TTC GAATTGATCAATGC       TTTTTTTTATTGTGT 100 84
HC660_RS09220 NONE
HC660_RS09225 1786562 .. 1786585 + -12.4  -4.04579   GGAATAAATCGACAG          GCGCTTTCCC AATC GGGAGGGCGC           TTTAATATTTGTAAC  95 117
HC660_RS09230 1787686 .. 1787701 +  -6.8  -5.63517   AAAGTCTAATAATAA              GCATCC TTAG GGGTGC               TTTTTTATTTGGAGG  90 146
HC660_RS09235 NONE
HC660_RS09240 1788995 .. 1789007 +  -3.3  -2.78463   AAAGAGGAAGAACGG                TTCGG GGG CCGCA                TGTAATGCAAGAGAT  44 8
HC660_RS09245 1789957 .. 1789977 +    -6   -4.9725   GAAAAAGATGAACAG            GCTGCTGG ATAAC CCGGCCGC            TTTTTCTATAAACAT  79 146
HC660_RS09270 NONE
HC660_RS09285 1795878 .. 1795899 +  -3.8    -4.431   GCTGTATTCTTTCGA           CAAGTGAA AGTTTC TTCATTTG            TTTTGTACATCAATA  64 277
HC660_RS09300 1798270 .. 1798282 +  -3.3  -5.95286   TTAATTACCAAGTGA                GGTTG TTC CTACC                TTTTTTGTTTTTCCT  91 109
HC660_RS09305 NONE
HC660_RS09310 1799711 .. 1799737 + -11.6  -6.08342   GGCAATCATAAAGAA         GCAGACGGTC AATGACA GGCCGTCTGC         TTTTTTTCTTTATTA 100 30
HC660_RS09330 NONE
        miaA 1802328 .. 1802344 +  -2.2   -2.8372   AAATTTTCACACATA              TAGCAG GAAAA CTGCAA              CTTTAATCGAAACTG  41 3
         hfq 1802642 .. 1802662 + -16.9  -5.36441   AAAGAAATAGAAGAA            CCTCGGGCT TTC AGCCCGAGG            TTTTTTGTGTCGCAG 100 56
        amyS NONE
HC660_RS09350 NONE
HC660_RS09355 1805103 .. 1805134 +  -8.8  -4.13963   TAAAAACGACACTTC      GAGTAGGATGAGAG ATGA TTCTCGTTCTGCTC       TCTTTTTTGGGCCCT  79 75
        nrdI NONE
        nrdE NONE
        nrdF 1808736 .. 1808756 + -12.7  -4.19238   TTTGATGATGAAAAA            GAGCAGATA TAA TATCTGCTC            TTTTCGGCTTGAAGG 100 14
HC660_RS09375 1809422 .. 1809448 + -14.5  -5.60993   TCTTGAATAAAAAAA         CCCGGTTTCTC ATGAA GAGGAACCGGG         TTTTTTTATCAGGCA 100 31
       spoVK 1812245 .. 1812265 +  -8.3  -5.69473   CGCTGGCTCGGTATA            GACCTCTTG CTG TGAGAGGTC            TTTTTTTCTAATGTA 100 25
        hflX NONE
HC660_RS09395 1814920 .. 1814935 +  -4.8  -4.22346   TGGATAAGAAATTAA              TTTGAA TAGT TTCAAA               TTTTCACTGAATTTC  66 21
        glnR 1815449 .. 1815461 +  -3.4  -2.98356   TTCATTAATCCGTTA                GCAA CTGTT TTGC                TATATACATTTACCT  45 33
        glnA 1816842 .. 1816868 + -11.6  -5.66868   GTATTAATCTCTCAA         TCCCTTGGCACT ATT GGTGTCAGGGGA         TTTTTTTGATTAGTT 100 34
HC660_RS09415 1819192 .. 1819211 +  -4.3  -4.72272   TAAATAAAGAAACGG            TTGCAGG TAACTT TCTGCAA             TTTTTCATGGAGGAG  71 330
HC660_RS09420 NONE
HC660_RS09425 1820445 .. 1820469 + -14.4  -4.41353   TGATACATAAATAAA          CAGCTACACC AATTA GGTGTAGCTG          TTTTAATCTATATCG 100 95
HC660_RS09430 1822236 .. 1822263 +   -10  -5.24989   ATCCGAAATAAAGAT        AAAAAAGGTACC AAAC GGTACCTTTTTC         TTTTTTAATCTATAA 100 30
HC660_RS09435 NONE
HC660_RS09440 1824150 .. 1824171 +  -5.2  -4.15396   CTGGATTATTGAGAT           GAACC-GAG CCAAA CTCTGGTTC           TTCTTTAATTTAAAA  63 50
HC660_RS09445 1825118 .. 1825128 +  -2.6  -5.36364   AAGATGTGCAAAACA                 TTTT ATA AAAA                 TTTTTCTGTTTTTAC  76 88
HC660_RS09460 1827516 .. 1827532 +  -2.3  -3.04398   TGTTGTATTTCAAAT              TGTTTAA GGG TAAAACA              GTTTTAGAGAGGGAA  42 19
HC660_RS09465 1828167 .. 1828222 +    -5  -4.20888   AGCTAAGTAACGTAA GTATCACAATATCAATCGAAAAAT AAATCTAA AATTCCCCATTGATATTGTGATAC TCTTTTTTAAATTGC  66 31
HC660_RS09475 1831264 .. 1831278 +  -4.2  -3.37556   CTAGTATCTACCCTG               GTGGAA TTT TTCCCC               TTCACTTGTTTTAAC  50 352
HC660_RS09500 1834229 .. 1834251 + -10.4  -4.40037   TTACAACGAAAAAAA           GGCCGCCGTC ATT GCCAGCGGCC           TTTTGATGCTTCTTT  89 166
HC660_RS09520 1836588 .. 1836605 +  -9.9  -4.96762   TTTGTCAGAGTAAAA             GAGAGAG GGAG CTCTCTC              TTTTTATACTGTATG  93 70
HC660_RS09525 NONE
HC660_RS09530 NONE
HC660_RS09535 NONE
HC660_RS09540 NONE
        yndJ NONE
HC660_RS09550 1841254 .. 1841277 +  -6.6  -5.99154   ACAGAAAGTAAAAGG          TGCACAAGCC AGCA GGCGGGTGCA           TTTTTTTATTTAATG 100 30
HC660_RS09555 1842238 .. 1842260 + -12.1   -4.8269   AAACAGTTATTAAAA           TAAGGAGGC TTTGC GCCTCCTTA           TTTTTCATCCTTCTG 100 28
        fosB NONE
HC660_RS09580 1844742 .. 1844773 +  -9.5  -5.75342   TCTTTTTCCTCCTAT      TCAGGTTCGCACCT AAGCC AGG-GCGAACCTGC      TTTTTTTTAAAACAA 100 315
        yneA NONE
HC660_RS09595 NONE
HC660_RS09600 1846905 .. 1846931 + -11.7  -4.62984   ACTCCATTAATATAA         GAGGAATACGG CAATA TCGTATTCCTC         TTTTGTATATACTAC 100 31
         tkt 1849088 .. 1849109 +  -6.6  -5.42164   AATAAGGTTTTCAAA           GGGGATGA GTCAAA TCATCCTC            TTTTTCTTGTTTATC  89 36
        sirA NONE
HC660_RS09615 1850009 .. 1850056 + -11.7  -3.14564   TGATATAGAGAAACA TGGTTATAAAATAAAAAACCC TTTATC GGGTTTTTTATTTTGCAATCA TTCATCACCCGCTAC  83 54
HC660_RS09625 NONE
HC660_RS09630 1851606 .. 1851617 +    -3  -4.13304   GCGTTATGGGAAATT                GAAA GTCA TTTC                 TTTTCAAAATGGTTT  55 24
HC660_RS09635 1852183 .. 1852204 +  -6.6  -5.63517   AAATGAATTAAAAAA           CCTTTCCT CTTCGC GGGAAAGG            TTTTTTATTTAAGAA  90 30
        acnA 1856628 .. 1856654 + -12.4  -4.85599   ATCATGACGTATGAA         GAAGAGAAGGCG CCC TGCTTTCTCTTC         TTTTTATGAGATAAG 100 34
HC660_RS09665 NONE
HC660_RS09670 NONE
HC660_RS09675 NONE
HC660_RS09680 1857906 .. 1857919 +  -8.1  -6.02919   TACCGTTCCTAAAAA               CCAGG GAAA CCTGG                TTTTTTTCTTTCTGA 100 29
HC660_RS09685 NONE
HC660_RS09690 1858712 .. 1858749 + -13.9  -3.37245   ACACGTTTTCATTTA   TAA-AAAAAGAACGCATA TCA TATGCGTTCTTTTTCTTA   TTGATATTCAAATAC 100 23
HC660_RS09705 1860295 .. 1860326 + -14.7  -5.36441   AGTAGATGCAGAGCT      GCAAAAATCCTTG TGAATT CAAGGATTTTTGC       TTTTTTATGTAAAGA 100 36
        parE NONE
        parC 1865078 .. 1865100 + -14.9  -3.59874   ATCATCATTAAAAAA           CCCGCTCAC ATATC GTGAGCGGG           TATATTTGTTTTTCA 100 40
HC660_RS09725 1867508 .. 1867533 + -14.9  -5.27335   AAATGATAAAGAACG         GCTGCATTCAA TGAT TTGAATGCAGC          TTTTTATTTGCCGAA 100 39
HC660_RS09730 1869336 .. 1869357 + -10.9  -4.53636   TAGTTACTGTATTGA           CGGACATCA CAAT TGGTGTCCG            TTTTCATTATCTAAT  90 38
HC660_RS09735 1869703 .. 1869745 +  -8.7  -4.46233   CAGAACATTTTTTTA TTCTGTCTCACTAACTTAAG TATA CTTT-GTTATTGAGACAGAA TTTCTTTAAAATTAA  84 68
HC660_RS09770 NONE
        galU NONE
HC660_RS09780 1877590 .. 1877621 +  -5.2  -5.64304   ACGATAGCTTATGGA      AATGCATAG-GGATG ACT CTTCCCCTATGCATC      TTTTTTGTTATCTTC  85 34
HC660_RS09880 1932847 .. 1932863 + -10.8  -5.47159   TTATATAAGAAAAAA              CGCCCG TTTTC CGGGCG              TTTTTTATATTGAGA 100 33
         ggt 1936113 .. 1936137 +  -5.8  -5.71712   AATAAAAAAGAAAAA          CTGTACTC ATTTTTGCC GAGTACAG          TTTTTTTCTATGGAC 100 36
HC660_RS09910 1938325 .. 1938352 + -10.7  -5.74122   CAATAGATTAAAAAA        GAAACCGG-CTG ACAAA CAGTCCGGTTTC        TTTTTTTATATAATC 100 30
        gltC 1945493 .. 1945518 + -11.9  -5.60864   ATCAATAAAAAAGAA         CCCGAGCTTCT GTGC GGAAGTTCGGG          TTTTTTTCGTGTATG 100 33
HC660_RS09945 1949588 .. 1949605 + -11.3  -4.20136   ATTCAAATAAAAAAA             GCCTGTC ACTA GACAGGC              TTTCGTTTTACGGAT  88 31
HC660_RS09955 1950796 .. 1950837 + -11.9  -4.58283   GAGGTTAAATATGAA TGATATCCCGTTGTTACGTT TAA AATG-GACAATGGGATATCA TTTTTAGGGAGGTTA 100 33
HC660_RS09960 NONE
HC660_RS09965 1952210 .. 1952237 + -12.9  -2.77678   ATAAAATCATGAAAA        GCAAGAGAATG ATAAGA CATTCTCTTGC         TGCTCTTCCCTATTC  90 29
HC660_RS10005 1962351 .. 1962373 +  -9.9  -5.36441   GAGAAAGCATAGAAA          CCGTCCAGAG CTTG CTCTGG-CGG           TTTTTTGTGTACACA 100 29
HC660_RS10010 1963028 .. 1963045 +  -5.5  -4.33767   CCATAAAAATAAAAA             GCAGGAT CGGT AACCTGC              TTTTCATGAATTTAT  68 299
HC660_RS10030 1965936 .. 1965965 + -10.1  -4.13728   GGCTATTGACATAAA       GAGGGGCTT-GCGT AAA ACGCCAAGTCTCTC       TTTTAAGGCTATGTA  85 32
HC660_RS10040 NONE
HC660_RS10045 1969284 .. 1969310 +  -4.5  -5.35459   CTGCAAACGTTAAAA        CAGCACT-ACGT CTTC GTGTGAGTGCTG         TTTTTTATGCTATAT  81 58
HC660_RS10070 NONE
HC660_RS10075 1975785 .. 1975806 + -10.9  -5.28176   ACTAATTTAAAAAAA           CCCTTCACA TGAC TGTGAGGGG            TTTTTTGTGCGTAGA 100 122
HC660_RS10095 1981376 .. 1981397 +  -7.3  -5.33124   CAAATCCCTATGTTC           TAGCTCATC TTTA GATGAGCTC            TTTTGTTTTGTTATT  91 57
HC660_RS10125 1988967 .. 1988985 +  -4.5  -5.31519   AATATATCGTTTTAA             TCCTCCC AGAAA GAGAGGA             TTTTTATTTAACTCT  79 450
HC660_RS10135 1991538 .. 1991554 + -10.1   -5.0538   ATAAAGATTGCAATT              GGGGGCT TCT AGCTCCC              TTTTTTAACCTCAAG  93 355
HC660_RS10160 1993135 .. 1993155 +  -8.9  -4.59919   TATGTTTTTCTTATA            CCCCCTCCA AAT TGAGGGGGG            TTATTTTTATGATTT  86 41
        rapK NONE
        phrK 2000277 .. 2000300 +  -7.5  -5.22137   TGATTCATTAATCTA          GCCCTACTCA TACTT TGAGT-GGGC          TTTTATTTTATGATT 100 48
HC660_RS10250 2005238 .. 2005259 +  -9.4  -6.37666   GCTTTTTGTACAAAA           CCGGGGTG CGCCAA CACCCTGG            TTTTTTTTATTTTAT 100 115
HC660_RS10300 NONE
HC660_RS10305 2013334 .. 2013358 + -17.3   -5.5208   GCCTCAATACGCAAA          GACGTTTGCCT CTT AGGCAAACGTC          TTTTTTGTGTTATCC 100 470
HC660_RS10345 2018886 .. 2018926 +    -7  -5.20216   CACAGTAAAGAAAAA GACATCCTTGCTTAATCGCG ACA TGCGGC-A-GCAAGGATGTC TTTTTTAATCGTGTC  91 11
HC660_RS10355 2020203 .. 2020219 + -10.9  -4.30844   ACAAACCTCAAAAAA              GCCATAC TGA GTATGGC              TTTTAATAATACGGT  88 99
HC660_RS10370 2022393 .. 2022413 +  -2.6  -3.53224   GTAATGGTGTAAAAC           CGCTT-AGG AGGA CCTGAAGTG            TTTGCACCCAAACTG  47 73
HC660_RS10375 2023390 .. 2023415 + -13.5  -4.16943   TTGACAAACATTAAA         CAGCTTGTAAA ATCT TTTACAAGCTG          TTTTCACATCTGCAC 100 27
HC660_RS10380 2024610 .. 2024640 +   -12  -5.30348   AACGCCTGACTATTA       GGAGGTCTTCTTAT ACA ACAAGAAGACTTCC       TTTTTATTGTTCGGT 100 32
        desK NONE
        desR 2026786 .. 2026818 +  -6.5   -5.5208   GTAGAAGTTTCAAAA      TCACTATTCTC TAAAGAAGCAT GAGAATAGTGA      TTTTTTGTATTGTCC  90 358
        dhaS 2035718 .. 2035734 +    -8  -5.96894   AAGCTTTTAAAAAAA              CTGCTG CCTGC CAGCAG              TTTTTTTCTTTCAGT 100 41
HC660_RS10440 NONE
HC660_RS10445 2038539 .. 2038556 + -12.7  -3.93166   AACTCTATTAAAAAA             GCCCCCT TTCC AGGGGGC              TTCATTTTTTAAAAA 100 30
HC660_RS10455 2041129 .. 2041156 + -14.3  -5.86976   TATTCTATATAAAAA        GGTACATCACG TTTAGC CGTGATGTACC         TTTTTTGTTTTATCC 100 46
HC660_RS10500 NONE
HC660_RS10505 2055340 .. 2055367 + -12.9  -5.55664   CTTGAAATTAAAAAA        GGTATAAGGTC CCTATA GACCTTATACC         TTTTTTTAATCATCC 100 19
HC660_RS10530 2058214 .. 2058235 +   -13  -4.77036   TAATGCGATAAAAAA           CGGCCTGC TTCTGT GCAGGCCG            TTTTTGCTAATAGAA 100 30
HC660_RS10545 2060004 .. 2060051 +  -8.1  -4.56775   AAATGGCCAGTCAAT GAAATAA-AAAAGAGAGATCCT TATTC AAGACCTCTCTTTTATTATTTC TTTTTCAGAAAAGCT  86 76
HC660_RS10560 2061570 .. 2061597 + -11.4   -5.7946   TAAATCTAAGAAAAA        CCTTAGTCCG GATAAACA CGGACTAAGG         TTTTTTTATTGAAAC 100 38
HC660_RS10575 NONE
HC660_RS10580 2065011 .. 2065033 + -17.8  -5.25805   GGTGCTTAAAAAAAA           CCATACGCGG TAA CCGCGTATGG           TTTTTTACATTTCTT 100 32
HC660_RS10590 2067377 .. 2067391 +  -2.9  -2.97021   GATTAGGAGGGAATT               GTATT GGAAA AATAC               TATCATATTTGCCGC  43 109
HC660_RS10595 2067649 .. 2067672 + -15.4   -5.8901   TTTTTAATGGAAAAA          CCCGCTTATC CAAT GATAAGCGGG           TTTTTTATTTTATAT 100 34
HC660_RS10610 2069623 .. 2069648 + -16.3  -4.10731   AAACCTTAAAAAACA         GAAAACTGCGG ATGT CCGCAGTTTTC          TTTCGTTATGTTGTT 100 32
HC660_RS10630 2071558 .. 2071587 +  -2.9  -4.18018   TTCGGTTCTGTGGCC       GATAATGCGAAAG AGTT CTTTTCCATAATC        TTTTACATAAACGAC  58 427
HC660_RS10700 NONE
HC660_RS10705 2083182 .. 2083200 +  -8.8   -5.1861   CGTGAACATAAAAAA             GCAGCCGA AAA TAGGCTGC             TTTTTTAATCATCAG 100 72
HC660_RS10730 2086479 .. 2086505 + -15.3  -4.08064   AAAACGGTAAAAAAA         GCACATACCCT CTATC AGGGTATGTGC         TTTTCGAAGCGCCTT 100 31
HC660_RS10770 NONE
HC660_RS10775 2093803 .. 2093823 + -12.6   -5.0133   TATCCTAATGAAAAA            GCGCAGTC TCAGT GACTGCGC            TTTTTTAGGCCCGTA 100 33
        metA 2104378 .. 2104390 +  -3.3   -4.0342   ATAACTCCTTACGAT                GCATG AAG CTTGC                TTGTTGTTGATTACA  55 213
HC660_RS10840 2105585 .. 2105608 + -15.4  -5.08601   CTGATGTTCTTTCAG          GAGCACACGA TTTT TCGTGTGCTC           TTTTTATTCACATCC 100 41
HC660_RS10845 NONE
HC660_RS10850 2106041 .. 2106060 + -13.6   -3.7201   AAGTTGACAAATAGA            GGAGAGGC AAAT GCCTCTCC             TATTTGATTTTCATT 100 50
HC660_RS10860 2106667 .. 2106691 + -15.9   -5.2189   GATGAATTCCAAAAA          TAAAACCGCAG CTT CTGCGGTTTTA          TTTTTTAGTGCTTAG 100 23
HC660_RS10875 NONE
HC660_RS10880 NONE
        sspL 2108881 .. 2108923 +  -6.4  -4.58395   CTAAAAAAAGCAATA CAAAACGCTAGAGGTGATC TTACAC GATC-TCTCTAGCGTTCAG TTTTTCAAGCATACG  77 15
        kduI NONE
        kduD 2125377 .. 2125399 +   -15  -4.62471   TGACCAAAAGAAAAA           GCTGATGATC ATA GATCATCAGC           TTTTTCGCGATTACA 100 38
HC660_RS10980 2127976 .. 2127997 + -13.1  -4.91459   GGCTGAAAGATGAAA           GAAGACGCT TCAG AGCGTCTTC            TTTTTATGCGTGTTC 100 52
HC660_RS11030 2135917 .. 2135942 + -10.6  -3.90464   CTTCCCAAAAAATAA         GCATGAATGA TTTGAT TCATTCATGC          TTCTCTTATTTAAAA  85 16
HC660_RS11040 2136726 .. 2136745 +  -9.3   -3.1996   TATAATAAAAATGAA            GACAGCC TTTATT GGCTGTC             TTCACTTGCAATTTC  74 53
        sspM 2137700 .. 2137722 +   -15  -5.09762   CGTCCTTCTACGTAA           GAAGCAAGGA AAT TCCTTGCTTC           TTTTATTTCTTCAGC 100 26
        recU NONE
HC660_RS11070 2142125 .. 2142145 + -11.9  -5.24129   CGAATTAAATTCAAA            GCCATCACT AAA GGTGATGGC            TTTTTTCTGCACAAA 100 33
HC660_RS11165 2159811 .. 2159828 +  -4.2  -5.42259   TCATTCCACTTTTCA             TGAAAG CTCGTA CTTTCA              TTTTTTTGGACATCC  83 412
HC660_RS11350 2191495 .. 2191519 + -10.8  -3.99678   ATCATAATACAAAAA          GCCCAAAACT CACAC GGTTTTGGGC          TTTCCTTATCCAACT  86 34
HC660_RS11440 2207941 .. 2207956 + -10.4  -5.99154   GAAGTAATCGAAAAA              GCTCCC CTGC GGGAGC               TTTTTTTATTTAATG 100 40
HC660_RS11450 2210622 .. 2210641 + -10.8  -6.09196   TCCATAATGAAAAAA            CTCAAGCT TTGC AGCTTGAG             TTTTTTTCTTTTAAC 100 34
HC660_RS11530 2224792 .. 2224802 +  -3.2  -3.30701   ATTCTGTTAATTATC                 GTAG GTG CTGC                 TTGGATTTGCTAGAA  48 2
HC660_RS11535 2225417 .. 2225440 + -16.8  -3.60395   AGCGAAGAAAAAAAA          GCAGAGGCTG ATAA CAGCCTCTGC           TTAATTATTGTATGA 100 15
HC660_RS11585 2233206 .. 2233223 +  -9.8  -5.87996   ATTCAAATAAAAAAA             GCGCCG AATTTC CGGCGC              TTTTTTTATTGCTTC 100 31
HC660_RS11705 2254038 .. 2254050 +  -7.7  -2.72839   ATACTTTCCCAACAG                CGGAT CTA ATCCG                TAATTGGCGGTAATT  60 426
        mciZ NONE
HC660_RS11725 2256548 .. 2256569 + -12.3  -4.69415   CGTCCATAAAGAAAA           CCAGCACCT GACC GGGTGCTGG            TTTATTTGTATTGAT 100 32
HC660_RS11735 2257876 .. 2257898 + -13.5  -4.21194   AAAATAACGTAAAAA           GCGAAAGGC CCCTA GCCTTTCGC           TTTTCCATCATAAAA 100 29
HC660_RS11775 2262540 .. 2262552 +  -6.2  -3.46602   CGCGGCTGATATCAA                GGGG AAGCG CCCC                TTCTCATATACGGAC  60 102
HC660_RS11780 2264195 .. 2264205 +  -2.4  -3.53012   GCAGCAACCCGGACT                 GGGG AAG CCGC                 TTTAACACAAGAAGA  46 10
HC660_RS11785 2264499 .. 2264546 +  -3.6  -2.85361   AATGCCCGTCTCCCC CGGCAAAAGGATGTCG-GT-CT CGGTAC AGCACACGATAGCCTTTTGCCA TCAATTTTTCAGTCA  44 99
        proC 2270298 .. 2270322 +    -5  -4.11183   TAGAGAAAAACATAA          GACAGAAGAC AATGC GCTTTCTGTC          TTCTTTATCCTAAGA  63 38
        namA 2273162 .. 2273193 + -18.2  -6.20267   GTAATCTTGAGATTC      GAGATATCC-GCGGC TCC GCCGCCGGATATCTC      TTTTTTTATTTTTGG 100 37
HC660_RS11830 2274047 .. 2274069 +  -9.1  -4.88407   GTCAATTAAACAAAA           AACCCGGCT AAAGC AGCCGGGTC           TTTTATTACTTTGTT  91 32
HC660_RS11845 2276919 .. 2276959 + -17.9  -3.42659   GTGGAATATATAAAG  AAAAAGGCTGAAAGTGCTT ATA AAGCATTTTCAGCCTTTTA  TTGATGTATTTAACT 100 28
        mifM NONE
        yidC 2281681 .. 2281705 +  -6.5  -5.96894   GGTGAAATAAAAAAA          CAACTTCGA CTTTTGT TCGGAGTTG          TTTTTTTATTTCCAT 100 31
HC660_RS11875 2282546 .. 2282570 +  -7.1  -5.23396   ACTGTTAGGAAAAAA          CCCGAATGC CAGATCC GCACTCGGG          TTTTTCTTCATTATT  91 40
      prli42 2286266 .. 2286279 +  -2.4  -4.96427   TTTTGTTGTCGATGA               TGAG AGCAAG CTCA                TTTGTTTTCTTGTTG  69 455
HC660_RS11930 2291461 .. 2291477 +  -2.9  -3.85698   CCGCAATGAATAACT              GTCCGCT GGT AATGGAC              TTTATAAAGAGCGAA  51 28
         bmr 2292756 .. 2292786 +  -9.8  -4.94972   CAGCATGTAAAAGTA       GCGTATTCTTTGTG TAC TGCAAAGGATGCGC       TTTTTCATTATACTG  93 31
HC660_RS11940 2293672 .. 2293706 +   -16  -4.50993   TGGTACATAGAAAAA     GAGCATTTTTTGAAGG TAT CGTTCAAAAAATGCTC     TTTCTGTTTGTTTAG 100 41
HC660_RS11985 2304172 .. 2304189 + -12.7  -5.45652   AAAAGATGTAAAAAA             GCCGGAG CGCG CTCCGGC              TTTTTTGTTCGCACT 100 30
HC660_RS12035 NONE
HC660_RS12040 2314522 .. 2314544 + -14.2  -5.24129   AGATTAATTTGATGT           GACTGCCGGA ATA TTCGGCAGTC           TTTTTTATAAAAAAA 100 34
HC660_RS12185 NONE
HC660_RS12190 2339703 .. 2339721 +  -6.7  -6.19302   CTGTCCGACTTTTAC             CTAGCTC AATCA GGGCTAG             TTTTTTTTGTTGTGT 100 66
HC660_RS12210 2342585 .. 2342639 + -15.5  -3.13908   GCGGAAAAATTAAAG C-TAAAAATTAAAAAACAGCTGTCTG ATAT CAGACAGCTGTTTTTTAATTTACAAG TTCACTGCTTACGTT 100 15
HC660_RS12230 NONE
HC660_RS12235 2349528 .. 2349538 +  -2.6  -2.81872   CATCGTTCTCGTTTT                 TTTT GGG AAAA                 TGCTATTATAATAAA  42 57
        sinI NONE
        sinR 2350263 .. 2350296 + -10.3  -5.49569   TGTCAATGAACATAA     GGAATGGCTCAGTAC GCAT GTACTGAGCCACCTC      TTTTTTCTATTAATG 100 70
HC660_RS12265 2353102 .. 2353118 +  -2.3  -6.09196   AAGGACCTTGTTCGT              TATATTG GTG CAATTTA              TTTTTTTCTTTTCAG 100 54
HC660_RS12320 2360476 .. 2360509 + -13.3  -3.54784   TTATCGAAGTAAAAA     CAGCTGAATAGCC CTAGCACA GGCTGTTCAGCTG      TTGCTTCTCTTGCGT 100 15
HC660_RS12330 2361591 .. 2361630 + -12.3  -4.77036   CTGAACCGTGAAAAA  CCGAAGATAAGCTGATT CAAGCA AATCAGCGGATCTTCGG   TTTTTCATCATGCAG 100 40
HC660_RS12340 2362506 .. 2362530 +   -13  -5.00895   CATTAAATGCAAAAA          GAGACAAACC TCATC GGTTTGTCTC          TTTTTCTATAATGAA 100 35
HC660_RS12350 2363500 .. 2363529 + -12.3   -5.5353   ATCCTACTGCACATT       AAAACCTGTATCC AGTG GGATACAGGTTTA        TTTTTTATTGCTGTA 100 24
HC660_RS12415 NONE
HC660_RS12420 2374823 .. 2374842 +  -6.4  -5.93809   AACACGATAAAAAAA            CAGGCTAT GTTA ACAGCCTG             TTTTTTTTATCCGAA 100 31
HC660_RS12470 2385237 .. 2385256 + -12.2  -5.20781   CTGCTGCTTAATTCG            GAGACTGC CTTT GCAGTCTC             TTTTCTTTTGTCATG 100 30
HC660_RS12475 NONE
        ispG 2386868 .. 2386904 + -16.2  -3.02511   AATTAAATGAAGAAA   CACAAAAAGCTTGACGG GAAC CCGTCAAGCTTTTT-TG    TATTAGAAAAATGGA 100 12
HC660_RS12490 2388014 .. 2388031 + -11.3  -5.06505   TGAAAAATTAAAAAA             GGAGCCT GATT AGGCTCC              TTTTTCTCTATCCTT  93 30
HC660_RS12505 2389891 .. 2389911 + -16.9   -5.5353   TCAAGCTGAAAAAAA            GCGGGGGAT TCA ATCCCCCGC            TTTTTTATTGCTGTA 100 32
HC660_RS12520 2393073 .. 2393088 +  -6.1   -5.1167   GATTGCAAGATTAGA              GCCGT TTGATT ACGGC               TTTTTATATTGCCTT  80 87
HC660_RS12525 2394076 .. 2394096 +  -8.3  -5.60993   AGTGAAAGCAAAAAA            CTGAGGC CCTCACA GCCTCAG            TTTTTTTATAGAAAA 100 22
HC660_RS12655 2418671 .. 2418681 +  -5.4  -4.93877   GAAACACATGAAGTT                 CAGA GAA TCTG                 TTTTCTTTAATAAAG  78 448
        rpsT 2432704 .. 2432725 + -13.1  -5.77856   TGCATAAAACAAAAA           CGATCCTCA TAAT TGAGGATCG            TTTTTTTCATTTCTT 100 34
HC660_RS12735 2434130 .. 2434151 +  -8.7  -5.33848   TAACACGACTGCCCG           GGCTGCTGA TTTC TCGGCAGTC            TTTTTTAATTCTCCT 100 38
HC660_RS12755 2438705 .. 2438726 +  -7.3  -5.07011   AAAGCATTTTAAAAA           CCATCGTCT TAGT AAACGATGG            TTTTTGATTTCTGTG  85 82
HC660_RS12800 2444330 .. 2444347 +  -5.5  -4.09864   GTTTTCAGCAAAAAA             CACCCCT AAAA AGAGGTG              TTTTCAGGGCTGGAT  65 129
HC660_RS12815 2447121 .. 2447149 +  -4.5  -5.80817   GAAAGTGTCAAAAAA        ATAAGGGCGGC CCGCTTT GCCCCCCTTAC        TTTTTTTCTGTTGCA  90 22
HC660_RS12825 2449076 .. 2449095 + -12.2  -4.46587   AGGATCATAGCAAAA            GAGGCTCA GTAT TGAGCCTC             TTCTTTTATTACTGA 100 31
        sigK 2450931 .. 2450951 +  -9.7  -2.96042   TTACCTTCATAAAAT            GCATCACCC CTT GGGTAATGC            TATGTAATAACTGTT  75 522
HC660_RS12845 2452225 .. 2452235 +    -4   -3.2032   GTGCCTGAAGATGGC                 GAAT CAA ATTC                 ATTTTAATCTAACAC  48 8
HC660_RS12850 2452698 .. 2452720 +  -3.4  -3.10531   AGCTAAACAGTGATG           CCTAAAGCTT TAA AAGCTTGAAG           TGTGTCTAGTTTTGA  46 21
HC660_RS12855 2453369 .. 2453388 +  -8.6  -3.87627   TTTATTTTGTTTTTA            GATCAAGC AATT GCTTGGTC             TCTTTTCTATCCAGC  79 96
HC660_RS12900 2459046 .. 2459070 +  -8.6  -3.86015   GCAATCTTAAATGAA          GAGGAATGGA TTATT TCCCTTCCTC          TTTATGCACCAACTC  76 105
HC660_RS12940 2465439 .. 2465463 + -10.2  -3.77023   AAAAAACACAAAGAA          GATACCAAAA TGGCT TTTTGGTATC          TCTTTATTAGTTCGT  81 102
HC660_RS12955 2468498 .. 2468516 + -10.3  -4.50241   AATCTGAACACAAAA             GAACCGC GACTG GCGGTTC             TTTTAATTCCTATTT  89 40
HC660_RS12965 NONE
HC660_RS12970 2471087 .. 2471101 +  -5.7  -2.90075   AGTGATCTCCCTTAA               GGAAG AATCA CTTCC               TCTAATTGAACAAGC  53 343
HC660_RS12985 2474153 .. 2474170 +  -5.7  -3.96624   ATTCCTTTATCATTT             TTTTCAA TCAA TTGAAAA              TTTATGATAAAAATA  63 426
HC660_RS12990 NONE
HC660_RS12995 2475367 .. 2475382 +  -6.1  -5.08169   AGCGCATACAAAGAA              CCCAC ATTTTA GTGGG               TTTTTTCAAATCTAT  80 54
HC660_RS13020 2478557 .. 2478579 + -11.4  -4.00308   CCCTGTTCTGTTTGA           CGCCATAAGA AAC TTTTATGGCG           TTTAAATTTGTTTTT  90 60
HC660_RS13025 2478833 .. 2478855 +  -8.5   -4.5265   CCCTGTTCGGCTAAG           CGCCATAAG AAATC TTTATGGCG           TTTTGTAATGTGATT  83 76
        nikA NONE
        nikB NONE
        nikC NONE
        nikD NONE
        nikE 2484850 .. 2484876 +  -5.8  -5.13344   TATGACATTGAAAAA         GAACCGTTGGCT TTA AACCATTGGTTC         TTTTTCTCTTACTGT  80 214
HC660_RS13090 2490073 .. 2490090 + -11.3  -5.46657   TAAAGATTCATTTTA             GGCATCC TTAT GGATGCC              TTTTTTATTACCCTA 100 49
HC660_RS13105 NONE
        yraA 2493592 .. 2493616 + -11.5  -5.24129   TTGAAATAACACAAA          GGCACAGAC GGTTTGA GTCTGTGCC          TTTTTTATAGAGAAG 100 32
HC660_RS13145 2503540 .. 2503564 + -10.1  -5.71983   AAAATCACAAAAAAA          GACAAGGGA GTTATGA TCCCTTGTC          TTTTTTTGTACTTCG 100 40
HC660_RS13155 2505456 .. 2505479 +  -9.6    -5.626   TATGTAACCAAAAAA          CATGGCTCGT CTCC ACAAGCCATG           TTTTTTTATGCACTC 100 64
        sigV 2506149 .. 2506163 +    -5  -3.18264   GCGCATTCAGTTGAC               GAAGGA GGA TCTTTC               TTAATGGATAAGAGA  52 7
HC660_RS13165 2507055 .. 2507066 +  -5.8  -3.53012   GTCGTCCTCTGGCAT                GGGA GTTT TCCC                 TTTCGCAAAGGGACC  60 56
HC660_RS13170 2509074 .. 2509093 + -12.2  -5.44119   TAGATTAGCAAAAAA            GAGGTCCT GCTG AGGACCTC             TTTTTTTGCGATAGA 100 38
HC660_RS13175 2510089 .. 2510108 + -13.6  -4.89063   CACATGCTAAAGCAA            TCCCGCCA TCTC TGGCGGGA             TTTATTTTTACCTAC 100 317
        fdhF NONE
HC660_RS13220 2520923 .. 2520942 + -12.2  -5.55664   AAGAATAACAAAAAA            CAGCCATC AGTT GATGGCTG             TTTTTTTACTCGTCG 100 33
HC660_RS13250 2525146 .. 2525176 + -21.4  -4.88646   AGCTGAGGTGTAAAA       CAAAAGCAGCCGAA AGA TTCGGCTGCTTTTG       TTTATTTTAATTTTT 100 28
HC660_RS13360 2546842 .. 2546866 +   -13   -5.5074   AAGAAAATAAAAAAA          CAGCCTTGAA TATGC TTCAAGGCTG          TTTTTTATTCCATTA 100 31
HC660_RS13390 2553285 .. 2553300 + -10.4  -6.09196   TTTTCAATAAAAAAA              GCTGCC TTTT GGCAGC               TTTTTTTATTTTGAA 100 31
       spoVB 2564761 .. 2564776 +  -2.4  -5.03314   CTTGCCGTCAAGCAG              CTGACG AATA CGCCGG               TTTTTTAAGGATAGG  71 421
HC660_RS13445 2565616 .. 2565634 + -11.7  -5.69793   TTCCTCATAAAAAAA             GAGCGGG GGCTA CCCGCTC             TTTTTTGTTTGCTAT 100 31
HC660_RS13495 2574026 .. 2574047 + -17.3   -4.0683   ATTCTTCATAGAAAA           GGCAGCCGC TTAT GCGGCTGCC            TTTATCACTTTATTT 100 30
HC660_RS13505 2574825 .. 2574849 +  -7.8  -5.40474   CCTTTTTAAACAGAA          GCGCGGCATA CTTCA TACGCTGCGC          TTTTTTTCACCCCAT 100 135
HC660_RS13510 2576449 .. 2576477 +  -7.4  -4.44797   CCTAAGATGAAAAAA       GACCGGC-CTGAG AGCA CTTTGCGCCGGTC        TTTTCATATTACTGA  78 36
HC660_RS13545 NONE
HC660_RS13550 2584657 .. 2584669 +  -9.1  -4.99861   TGAAGACTAAAAAAA                GCCCT ATT AGGGC                TTTTTATAATTGATA  91 31
HC660_RS13660 2603340 .. 2603369 +  -5.6  -4.11394   ATGGATATAAACAAA       CAAGTCCGCGCC AATTAA GACGTGGACTCG        TTTTCCGCCTGAAAT  65 31
HC660_RS13705 2613731 .. 2613768 +  -8.5  -5.53991   AATCTATACGATAAA   TAAAAAACCGGCAGAGA TCAA TCTCTACCGGTTTATCA    TTTTTTTGATCACTC 100 27
HC660_RS13775 2632007 .. 2632030 + -15.4  -3.96681   ATTAAATATCATCAG          GTGCCGAACA TCTA TGTTCGGCAC           TTATTAATTTATTCA 100 36
HC660_RS13780 2632632 .. 2632670 +  -4.8  -5.86976   TTGTGAAATATAAAG  GATAGATAAGTGCGGGA CTATGT TTCTGT-CTTATCTATC   TTTTTTATTTTCTCC 100 35
HC660_RS13785 2633650 .. 2633678 +  -7.5  -5.40474   AAAATATCCAAAAAA        GGCTGACTTGA TGTGATT TTAGGTCAGCC        TTTTTTTAAAAAACT 100 40
HC660_RS13800 2637738 .. 2637761 +  -4.5  -3.77806   CCGTCTCTAAGTAAA          CGCAGCAGA ACGTTA TTGGCTGCG           TATTTTGGTCTGCGC  58 515
HC660_RS13820 2639817 .. 2639841 +  -3.5  -3.04144   TGATAACCGAACACA          CATTCGCATAT AAT AAATGCGGAGG          TGTTCGCCATGGAGA  45 38
HC660_RS13825 2640171 .. 2640194 +  -9.5  -3.10724   ATAAACGTAAAAAAC          GCCCCATCC GGTTAA GGACGGGGC           TGCTTTCATTTATTC  74 11
HC660_RS13980 NONE
HC660_RS13985 2669693 .. 2669727 +  -3.6  -2.66634   AGCGCCAGAAACGTT    GATACGGGGATAGAT GTGAGA GTCC-TCCCCGTGTC     TCCTATAGTACCGTA  45 213
HC660_RS13990 NONE
HC660_RS13995 2670738 .. 2670749 +  -2.2  -3.62011   TCGTCGGTTTTTCCG                CATG CTAA CGTG                 TTATAATTTACCTAT  48 147
HC660_RS14000 NONE
HC660_RS14005 2671194 .. 2671213 +  -5.6  -5.50313   TTAAGACAAAAATAA            AGACGCCT TAGC GGGCGTCC             TTTTTTCGTTTTATG  83 37
HC660_RS14030 2674831 .. 2674841 +  -5.4  -3.17075   GGCAGGACGTAAGTA                 TCTG GCG CAGA                 TTGGATTCGGAGGCA  54 131
HC660_RS14155 2695056 .. 2695075 +    -5  -4.29326   TTAAAATGTTACGGA            CACCTTTA CGAA TGGAGGTG             TTTATTACGTTTAAG  66 67
HC660_RS14160 2695461 .. 2695475 +  -7.1  -2.91063   CTCCGTTATATAACC               GTGCG CAAGC CGCAC               CTTTCCGTTTAAATA  59 174
HC660_RS14300 2714489 .. 2714512 +  -8.9  -4.94972   CTGTTTAATGAAAAA          GGCGGTGACT GCATG AGTC-CCGCC          TTTTTGGTTGTCATG  91 33
HC660_RS14310 2716230 .. 2716242 +  -3.4   -5.3472   TTGACGGAACCGAAA                TGCT TTAAC AGCA                TTTTCTTTCTTTTTT  81 180
HC660_RS14380 2731979 .. 2732001 + -12.1  -5.46657   CGTTCATAGAAAAAA           GCTTGCAGA TGTTC TCTGCAAGC           TTTTTTATTAGCCTC 100 32
HC660_RS14395 2735911 .. 2735924 +  -3.1   -5.0133   GTACAGCGGGACGTA               CAGGT TCAA ATCTG                TTTTTTCCAGCAATC  72 131
        sspI 2736922 .. 2736939 + -10.5   -5.9218   CAATAGCCATCAAAA             CCGGGTG ACAG CGCCCGG              TTTTTTTCTTATATA 100 35
HC660_RS14410 NONE
        glcD NONE
HC660_RS14420 2740939 .. 2740963 + -17.3  -4.20981   TAACATCATAAGAAA          GCCCAAAACAG TGT CTGTTTTGGGC          TTTGTGCTTTATTCC 100 30
        ysdB 2757054 .. 2757080 + -13.1  -5.28176   AAACTTGCAAAAAAA         GCAGAAGAGCG CTAAA CGCTTTTCTGC         TTTTTTATAAATCAA 100 11
HC660_RS14520 2759831 .. 2759841 +  -6.8  -3.18274   AATAGAAAAAGCCAA                 GGCT GTC AGCC                 TTGGCTTAACCTCCG  60 41
HC660_RS14545 2764586 .. 2764611 +   -12  -5.75599   AACATAAATAAAAAA         GCATGATCTC TTTCAT GAGATCATGC          TTTTTTTATCATTTC 100 30
HC660_RS14595 NONE
HC660_RS14600 2776251 .. 2776282 + -13.2  -3.28791   TCGATTTTTAATCAC      AAAAACACCGTTCA TCAA TGAACGGTGTTTTG       TTATGCCCAGCAGCT 100 30
        ytvI 2789662 .. 2789686 +  -4.2   -5.1417   CCAGCAAAAATAAAA          CAGCAGCC CATGATGCA GGCTGCCG          TTTTTCATTTTATAA  75 28
        ytrH NONE
        ytrI NONE
HC660_RS14705 2801267 .. 2801304 +    -8  -3.66378   ATCCCCGTCACAGAT  GAACACTAAG-AGAGAGGG TCT CCC-CTCTACTT-GTGTTC  TTTACATAACGTCTC  70 17
HC660_RS14715 2802662 .. 2802691 +  -9.3  -3.96483   GCTGAAAGAGATCAC       GCGTAAGGGGCGCC TGA GACGTCCCTTA-GC       TTCTTTCCATCAGCT  81 20
HC660_RS14785 2816246 .. 2816266 +  -8.3  -5.52023   TATAGAAAATGAAAA            GGACAGG CTATTCC CCTGTCC            TTTTTTATTGGTGAT 100 36
        brnQ 2823855 .. 2823876 + -13.7  -5.52384   AGTTAATATCATGGT           CGCCTGCGT TACT GCGCAGGCG            TTTTTTTAATAAAAA 100 35
        hisJ 2826802 .. 2826828 +  -5.8  -4.99861   AAGAATAAAATGAGG         CAGCGGCAGCGT TAA ATGTTCTCGCTG         TTTTTCTCCTTCCTC  78 201
HC660_RS14835 2827878 .. 2827902 + -10.1  -5.62552   ATGCATACAACAAAA          GCCCAAAAC ATGTAGC GTTTTGGGC          TTTTTTCATTTTTTT 100 40
        rpsD 2830560 .. 2830584 + -14.9  -3.93988   TTAATCGTTTAAAAA          CCCCCTGCCGC TAT GCGGTCGGGGG          GTTTTTTTCGTCTGC 100 37
        acuA NONE
HC660_RS14870 NONE
HC660_RS14875 2836796 .. 2836815 +  -7.2  -6.04324   AAACAAAATAAAAAA            CGACCTTCA CGA TGA-GGTCG            TTTTTTATTTTTTGA 100 30
HC660_RS14945 2849466 .. 2849502 +  -8.8  -4.86033   CAAAATAAGAAAAAA   GCTTGTCGA-CATGGCT TACA AGCCTTGCTCAACAAGC    TTTTTCTACAGGTTT  91 33
HC660_RS14955 2851089 .. 2851112 + -18.2  -4.31164   AAGCGTAAAAGAGAG          GAGCCGCTGC CCAT GCAGCGGCTC           TTTATATTATATCGC 100 49
HC660_RS14975 2855106 .. 2855125 +  -9.3  -4.12188   TGCCGTACATGCCCA            GCCAGCT CTCCCA AGCTGGC             TTTTCAACGTAGTGG  80 196
        cysK 2861648 .. 2861683 + -15.6  -4.15106   TGGTCATTTGTGTAA    AAAAAGGACTGGCTTC AGAA GAAGCCGGTCCTTTTA     TTTTGCAAGTTCGTA 100 26
HC660_RS15015 2864482 .. 2864502 + -15.5  -5.33405   ATAACATACAGAAAA            CCCAAACGG CAT CCGTTTGGG            TTTTTATTTCATCAA 100 37
HC660_RS15030 2866975 .. 2866995 + -11.2   -5.2189   TATATATAATAAAAA            TCCCGCAT GTGAG ATGCGGGA            TTTTTTCATGCTTGC 100 123
HC660_RS15045 NONE
HC660_RS15050 2872629 .. 2872655 + -10.9  -5.80951   CTTAACCATAAAAAA         GATCTTCCCGC AGTAC GCGGAAAGATC         TTTTTTATTTTCGAT 100 36
HC660_RS15085 2880018 .. 2880042 +  -5.8  -4.75308   AGAAGCATATAAAAA          CCCAAAAC CACTTGCAC GTTTTGGG          TTTTTCACTATTACT  77 29
HC660_RS15140 NONE
HC660_RS15145 NONE
HC660_RS15150 NONE
HC660_RS15155 NONE
HC660_RS15160 2896545 .. 2896566 + -10.1  -4.83759   ATACAAATAAAAAAA           CTAGGGGTG ATCT CTCCCCTAG            TTTTTCGGTTTCGTT  91 31
HC660_RS15180 2901360 .. 2901382 + -11.3  -4.30719   CCGATTATGTAAAAA           GATCCCGCT CATCC GGCGGGATC           TTTCTTATGAAGAAA  88 29
HC660_RS15190 2903518 .. 2903552 + -20.3  -4.13767   CGCCGAAACGATAAA     CAGTAAAAGCTCCAG TTTCT CTGGAGCTTTTACTG     TTTTACAATGCCGAC 100 27
HC660_RS15255 NONE
        mraW 2915696 .. 2915720 + -11.6  -5.67283   GCGATCGAAAAAAAA          GCTCAAATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAGTT 100 8
HC660_RS15275 2918231 .. 2918253 +  -6.3  -5.10154   GATAACCATCGCTGA           CCCGAAC CAAATAGCA GTTCGGG           TTTTTAATTTTCCAT  80 87
        pckA 2925303 .. 2925326 + -12.5  -4.33004   GTTTAAAAAGCAAAA          GCCAAGAGC AATTCA GCTCTTGGC           TTGTTTTAATTGACT 100 35
HC660_RS15310 NONE
HC660_RS15315 NONE
HC660_RS15320 2929140 .. 2929156 + -10.8  -4.90266   GCAGAACATAAAAAG              CCCGGC AGATA GCCGGG              TTTTTAGTTGATCCA  93 30
        ytzI 2931193 .. 2931207 +  -4.2  -5.47399   TTGGACTTTTAAGGT               CGGCAT GCT GTGCTG               TTTTTTTGCAGTTAC  88 94
        yidD 2932543 .. 2932555 +  -7.7  -3.18264   GACAACATCCAGTTT                TCCTG TCT CAGGA                TTAATGACTAAACCA  64 58
HC660_RS15370 NONE
HC660_RS15375 NONE
HC660_RS15380 2936269 .. 2936296 + -12.8  -5.04325   TTTGTAAAAATAAAG        GAAAGAGCTGGC ATTA GACAGCTCTTTC         TTTTTGTGCTTTGAG 100 34
HC660_RS15435 2949006 .. 2949030 + -17.2  -2.87931   AGCTCATCTACATCA          TCACCCCCGC ATACC GCGGGGGTGA          TCTATCCAAGATAAA 100 93
HC660_RS15440 2949564 .. 2949580 +  -9.4  -5.02074   CTTTGAACAAAAAAA              GCCGCT CAAAT AGCGGC              TTTTTTACACCATCG  91 35
        thiT 2965729 .. 2965759 + -22.7  -4.72127   AAAAGCTTAATCTAA       CAACCCCCAGCGG CCGTT CCGCTGGGGGTTG       TTTTCTATCTTCTGT 100 31
HC660_RS15610 2969029 .. 2969063 + -23.2  -5.37171   GAAATTAAACAAAAA     GCAGAAAGAGTCTGAT TTA ATCAGACTCTTTCTGC     TTTTTGTTTAATGTT 100 11
HC660_RS15630 2973166 .. 2973183 +  -9.1  -6.28401   AAAATAATTAAGAAA             CGTCTGG AAAA CCGGACG              TTTTTTTGTTTTTTC 100 34
        bslA 2973920 .. 2973938 +  -9.5  -5.25805   TAAGTAATCCCAGAG             GGCCGGC TTTGT GCCGGTC             TTTTTTACGTTTATT 100 34
HC660_RS15640 NONE
HC660_RS15645 2976313 .. 2976333 + -11.2  -5.37345   GTGATGTTAAAAAAA            TCCGGCAT ATTAC ATGCCGGA            TTTTTTATGATTCAA 100 37
HC660_RS15665 2980666 .. 2980687 +  -7.3  -4.74504   ATTGACAGAAAAAAA           TAAGGCCCT TTCC AGAGCCTTA            TTTTTCGATTCACAT  81 406
HC660_RS15685 2983960 .. 2983987 + -19.2  -5.48825   CAAGCCTAAAAAAAA        CCGCCCGCG-GCA TGT TGCACGCGGGCGG        TTTTTTTAAATAATC 100 32
HC660_RS15735 2999387 .. 2999415 +  -8.1  -3.66424   ATCACCCGCTAAAAA        CCCCACCGTCT ATTTTGG GGACGATGGGG        TTTCAAATGCTTTTC  73 29
HC660_RS15775 NONE
HC660_RS15780 3007075 .. 3007102 +  -9.2  -3.25169   GTGATCGTACTCCCA        GCCGC-CGTTTAT CAC ATAACCGAGCGGC        TTCATGACTTGTTCC  70 331
HC660_RS15810 3012050 .. 3012073 +   -11  -4.81685   ATAGGATAAAAAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTCATGCTTACT  91 37
HC660_RS15830 3015319 .. 3015334 +  -6.1  -4.57569   CACAGAATAAAAAAA              CCGGT TTGTAT ACCGG               TTTTTCAAGGCGTGC  74 31
HC660_RS15840 3016866 .. 3016892 + -12.4  -4.20367   AATATTCGTCACAAA         CGCCTTTACG TATCAAT CGTAAAGGCG         TTCTTTATTAAGAAA  95 40
HC660_RS15845 NONE
HC660_RS15850 3018762 .. 3018778 + -10.1  -4.77757   GATAAATCAATCCTC              TCGCCGA TTG TCGGCGG              TTTTGGTTTTTCGAG  91 92
HC660_RS15865 3020747 .. 3020757 +  -5.4  -2.66593   TTTTCAGCAAAAATT                 GAAG AGT CTTC                 TAAATTTAACCTTCT  51 41
HC660_RS15870 3022680 .. 3022691 +  -3.6  -3.65046   CATCTGGAAAGGAAC                GCTG CAAG CGGC                 TTATTAAAATCGGAG  53 7
HC660_RS15875 3023140 .. 3023167 + -17.2  -3.54771   CCATAAACGAAAAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 35
        maeL NONE
        maeM 3026190 .. 3026214 + -12.2  -5.03994   ATATTTATAAAAAAA          CGCACTGTTC ATATC GAGCAGTGCG          TTTTTCTCTGTCACA 100 31
        nupN 3027742 .. 3027767 +  -9.1  -4.72696   TGAATAAGAATCGCG         GGGATAAGG AGAAGAGC CCTTATCCC          TTGTTTTTCTTTCAG  88 34
HC660_RS15900 NONE
HC660_RS15905 NONE
        nupQ 3031402 .. 3031426 + -15.1  -4.91109   AAACGGTAGCACATC          TCCCTGGGAAG CGG CTTCTCAGGGA          TTTTTCTGATCCAAA 100 32
        maeN 3032903 .. 3032925 + -12.8  -5.80003   TCATAATCAGAAAAA           GAGTTCCGTT TTA GACGGAACTC           TTTTTTATTTGTTCA 100 35
HC660_RS15925 NONE
HC660_RS15930 NONE
HC660_RS15935 NONE
HC660_RS15940 NONE
HC660_RS15945 NONE
HC660_RS15950 NONE
HC660_RS15955 3039155 .. 3039180 +  -7.6  -6.14618   ACCTATAAAAATGAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTTGTG 100 33
HC660_RS15990 3045104 .. 3045117 +  -3.7  -5.06414   CATATACGAGGCCGG               CTGCG GGCG CGCTG                TTTTTCTTGCCAACA  76 283
HC660_RS16075 3064673 .. 3064702 + -18.1  -6.14618   TATCAAACTTCGAAA       CATGGGTTTGTGA AATT TCACAAACCCATG        TTTTTTTATTTTCTG 100 13
         ald 3065934 .. 3065957 + -11.8   -5.9362   CTTAATTCATATTGA          GCTTGCAGAA AAAT TTCTGCAGGC           TTTTTTTATCTTTTA 100 36
HC660_RS16085 3066725 .. 3066745 + -11.2  -5.44119   CGTAAGATAGAAAAA            GAGACTGC CTGCT GCAGTCTC            TTTTTTTACCGTCAA 100 36
HC660_RS16130 3081376 .. 3081397 + -11.6  -5.36441   ATGATAAACGAAAAA           GGCTCTCC CGTTAA GGAGAGCC            TTTTTTCTATAAGAC 100 69
HC660_RS16145 3085021 .. 3085042 + -14.5  -5.00196   CTGTAAAAAAAACAA           CGCTTCAGC CGCA GCTGAAGCG            TTTTATTCTTTCACA 100 35
HC660_RS16170 3089055 .. 3089082 +   -10  -5.63517   TAAGTAATAAAAAAA        GGAGTTTGTGTCA AGG TGACAC-AGCTCC        TTTTTTATTTGAAGA 100 34
        guaC 3090491 .. 3090521 + -16.3  -5.42131   TAAGTATTAAAAAAA      GCCAAGTC-AGCGG TTCG CCGCTTGACTTGGC       TTTTTTCTATCATTA 100 31
HC660_RS16205 3094879 .. 3094897 +   -11  -4.60797   CGGATAATAGCAGAA             CCGCTGAT GAA GTCAGCGG             TTTTCTGTATAACCG  90 34
HC660_RS16215 3095662 .. 3095688 + -16.7  -5.60993   TCTTTTAATAAAGCA         GCCAGGCTGAT ATTTG ATCAGCCTGGC         TTTTTTTATGAGAGA 100 33
HC660_RS16245 3102939 .. 3102959 + -10.3  -4.88495   GGCATACAGAATAAA            GGGCACCCT TTT GGGGCGCCC            TTTTGTTATATATGT  93 27
HC660_RS16265 3105231 .. 3105247 + -12.3  -4.22338   TAGGAATGACAAAAA              CGCCAGA TGA TCTGGCG              TTTTGGCATTATGCT  95 16
HC660_RS16275 3107372 .. 3107400 +  -8.9  -6.12458   AGAAAAAGAAATGAC        GAAAGCCGCCT CATGAAA AGGCGGCTTTA        TTTTTTGTTTTTTTC 100 27
        pucR NONE
HC660_RS16320 NONE
HC660_RS16325 NONE
        pucL NONE
        uraH 3119962 .. 3119989 +  -9.9  -2.55069   GGGAGTTAAGAAGGA        G-GAAGCCCGCT GATGA GGCGGGCTTCGC        ATATGTTTAGGGGTT  73 32
HC660_RS16345 3120389 .. 3120419 + -11.3  -4.35518   TTACCCCATATCCGT       CAGACGCCATAAG AAACC TTTATGGCGTTTG       TTTTGCTATAGCGTT  88 50
HC660_RS16385 3130722 .. 3130743 + -15.9  -4.91109   TGGCCGTAAGAAAAA           GGTGCTCCC CGAA GGGAGCACC            TTTTTCTAATACACA 100 32
        frlR 3132897 .. 3132915 +  -4.5  -2.87963   GCTGTTTCCGCTCCT             TGGCGCA AAGCG TCCGCCA             TATCCTGATTCTCAC  48 159
HC660_RS16435 NONE
HC660_RS16440 3140284 .. 3140310 + -13.7   -5.4756   TTCTGCATATAAAAA         GGACGCGTCTG AAAAC CAGTCGCGTCC         TTTTTTATTAACATT 100 83
HC660_RS16540 3157448 .. 3157469 + -12.3  -3.99805   TGGAACAATAACAAT           GCAGCCCGCG TCC CGCGG-CTGC           TTTCACTTTTTGAAA  95 30
HC660_RS16550 NONE
HC660_RS16555 3159096 .. 3159106 +  -3.2  -3.75933   CAGATCAGCAAAAGG                 GTAC GAT GTGC                 TTTACTGGCATCTAT  53 52
HC660_RS16560 NONE
HC660_RS16565 3161335 .. 3161354 + -12.1  -2.91664   TCATTAATAGAGCAA            CCCGCGG ACATAA CCGCGGG             GCTTTTTTATTCGAT  87 34
HC660_RS16580 3163521 .. 3163550 + -18.7  -5.09173   GCAACATAACAAAAA       GCAGTCTGCCGTT TATG AGCGGCAGACTGC        TTTTTTAGCCTATTC 100 32
HC660_RS16605 3168230 .. 3168254 + -10.3  -3.51015   AACTATTCACCCGAA          CTAAATTATAA TTA TTATAATTTAG          TATTGATTTTTAATT  81 15
        mrgA 3168786 .. 3168808 + -13.5    -5.055   CTAGGCTAAAAAAAA           GCTGAACCC TCTTC GGGTTCAGC           TTTTTTGCCAGTTAG 100 32
        cssR NONE
        cssS 3172500 .. 3172525 +  -7.7  -5.36441   ATAGCAGTGCCAAAA         TAGACTGTAGA TATT TTTGCAGTCTA          TTTTTTATGTGAAAG 100 23
HC660_RS16635 3173744 .. 3173764 + -15.5  -5.47431   ATATATTTAGAAGAA            CGGCTGCTT CAC AAGCAGCCG            TTTTTTCTCTATTAC 100 31
       gerAA NONE
HC660_RS16655 NONE
HC660_RS16660 3179456 .. 3179487 +  -9.5  -4.60746   GGCTCTCCCTTGCTT     GCGGCACGG-ATCGC ATCA GCGATTTCG-GCCGC      TTTTGATGTTTTTAG  91 315
HC660_RS16720 3190409 .. 3190428 + -13.6  -5.96219   CTTTAAATGCAAAAA            CGCATCCG TTTT CGGATGCG             TTTTTTTTATAACTC 100 35
HC660_RS16750 NONE
        oxdC NONE
HC660_RS16760 3196872 .. 3196896 +  -9.4  -5.16841   GCCCAGCTAAAAAAA         GAACGCCATCC GATT GGATG-CGTTC          TTTTTATTCATATCG  91 31
HC660_RS16795 3204198 .. 3204219 + -11.6  -4.89567   AACAAAATAAACAAA           GAGCCGCA CTGATC TGCGGCTC            TTTTCTATTTTGCAA 100 31
HC660_RS16810 3206968 .. 3206979 +  -4.4  -4.08216   TTTTATATGCTGTTC                CATG GGCG CATG                 TTTTAAACCGAGTGC  61 8
HC660_RS16815 3208949 .. 3208963 +   -10   -5.9663   TGGTCAATAAAAAAA               TCCCTC TTA GAGGGA               TTTTTTTTCATGTTT 100 31
        modA NONE
        modB 3211459 .. 3211480 + -11.6   -4.8622   AAACACATGAAAAAA           CTCCCCGT ACTTAG ACGGGGAG            TTTTTGATTAAAACA 100 12
HC660_RS16840 3213062 .. 3213080 + -13.2  -5.80364   AACCTATAGAAAAAA             GCTGGCAT CCG ATGCCAGC             TTTTTTTCTTGAAGT 100 39
HC660_RS16865 3222506 .. 3222542 + -19.8   -4.3014   CCCTTCAGGCTGCCA    TAAAAGAAACCTCTCC ATGAC GGAGAGGTTTCTTTTA    TTTTACTGACTATCT 100 96
HC660_RS16905 3231146 .. 3231167 +  -9.4  -5.27477   AGAACAATAAATAAA           GCCTCCCT TTATAC GGGGAGGC            TTTTTTCATTAGAAT 100 31
HC660_RS16975 3243640 .. 3243657 +  -3.3   -4.7078   CAAAGGCTTAGAAAA             CACTTGG TTCC CCAGGCG              TTTTTGCATCATTGA  67 42
        rghR NONE
HC660_RS16990 NONE
        catR 3245304 .. 3245335 + -10.9  -6.20267   ATGTAATTGCTAAAA      CGGTTCTGATCTC AAAGGA GAGAACAGAGCCG       TTTTTTTATTTTTCA 100 35
HC660_RS17070 3261871 .. 3261883 +  -4.8  -5.80727   CGTTTTTTTACTAAG                CTGC ACTGA GCAG                TTTTTTCTTCTTTTT  93 63
        opcR 3266101 .. 3266126 + -14.8  -4.43844   CGAAAACAGCTGAAA         GCAGCTCCCT GAAGTA AGGGAGCTGC          TTTTCTACATGATGA 100 9
HC660_RS17100 3266908 .. 3266937 + -10.8   -4.9218   AATAACTAGAAAAAA       GACACGGGTTCGC ATCTG GC-AGCCCGTGTC       TTTTTCTGATACATA  93 32
HC660_RS17105 3267769 .. 3267794 + -13.3  -5.05606   TTCTTTTAAAAAACA         ACCCCATCACC TGCT GGTGATGGGGG          TTTGTTTTTATTGAA 100 32
HC660_RS17115 3270227 .. 3270252 + -13.3  -3.48931   AAAAAGCACCAAAAA         AACCGCCGAGA TTTC TCTCGGCGGTC          ATTTTATTACTTGTT 100 39
HC660_RS17140 3275306 .. 3275330 +   -10  -3.40784   GTCTTCATGGAAAAA          GGGAAAGGGA GTCCG TCCCCTTCCC          TTGTCCGCTTTCATT  79 47
        araR 3280462 .. 3280490 +  -8.2  -5.28826   TGAATGAATAAAAAA        GCAATGTATGGG TTTCC CCTTTACATTGC        TTTTTTATGGCCTTT 100 30
HC660_RS17175 3283568 .. 3283593 + -14.1  -4.60258   TTCACAATAATAAAA         CCCTCTTGTCG GATG TGACAAGAGGG          TTTCTTATTTACTGG 100 31
HC660_RS17230 NONE
HC660_RS17235 3295550 .. 3295587 +  -7.1  -4.86862   TGTAAAATAAAAGAA   TCCATGAGAGATAACAA TGCA TTGTTACGCCTCATGGA    TTTTCATTTTTTCAG  83 31
HC660_RS17275 3306410 .. 3306427 +  -7.7  -4.99645   GATTCCGTAAAAAAA             TCCTCCT TACA GGGAGGA              TTTTATTTGTACCGT  86 31
        yvfG 3308039 .. 3308065 + -11.7  -4.62203   GAGAATCAAAATAAA        CCTTCC-GCTCA CATA TGAGCAGGAAGG         TTTTCCTTCTTTAAG 100 27
HC660_RS17365 NONE
HC660_RS17370 3326211 .. 3326244 + -15.5  -5.62288   TCAGCAAAAAGAAAA     CCCGGTAAAGAGA AGTCATTC TCTCTTTACCGGG      TTTTTGTTTTCTTAC 100 210
        sacB 3334513 .. 3334551 + -14.2  -4.68209   GTTAACAAATAAACG   CAAAAGAAAATGCCGATA CCC TATTGGCATTTTCTTTTA   TTTCTTTATTAAAAT 100 29
HC660_RS17430 3336134 .. 3336169 + -18.6  -3.28712   GATACGATTCATCAA    TAAAGACAGATGCAGC GCTT GCTGCATCTGTTTTTA     TTGTGAGAGCCGAAA 100 23
HC660_RS17435 3337827 .. 3337849 + -12.8  -5.22039   ATTATGATAAATAAA           GAAGCAGGAG TTT CTCTTGCTTC           TTTTTTCGCTTTACA 100 27
HC660_RS17440 3338515 .. 3338530 +  -3.2  -5.24989   AGCTTAAAAAATGAC              TGGGTG ACAC CGCTCA               TTTTTTAATATCTAA  75 34
HC660_RS17445 NONE
HC660_RS17450 3339235 .. 3339274 + -16.8  -4.32436   GTCTTACGTCTTAAT  CATAAAAGGCATATACAG ATAG CTGTATATGCCTTTTATC   TTTTACTCATCATCT 100 27
        clpP 3340907 .. 3340932 + -16.3   -5.1861   AAAGTAATACTGCGA         CCTGCAAGAGA CATG TCTCTTGCAGG          TTTTTTCATGCTAAA 100 34
HC660_RS17485 3342765 .. 3342780 + -11.8  -5.76949   CATGCATAAAAAAAA              CGGCCG CAGT CGGCCG               TTTTTTTTCACCCTG 100 32
HC660_RS17500 3346392 .. 3346412 + -11.2  -3.94184   CGGTAAATTAAAAAA            TCCGGTCT GATGA AGACCGGA            TTTCATATTACATAT  86 35
HC660_RS17525 3351340 .. 3351360 + -11.2  -4.19238   TGTTCATAAGAAAAA            GCTTGCAG TATGT CTGCAAGC            TTTTCACATTACAAA  86 32
HC660_RS17635 3373218 .. 3373229 +  -4.4  -4.82819   AAAGTAAAGCTGCCC                GCTT TCAC AAGC                 TTTTCTTATGCTCTC  71 34
HC660_RS17640 3374137 .. 3374161 + -12.8  -5.25699   TAATATAAAGAAAAA          GCCCGCGGTT ATTTG ATCCGCGGGC          TTTTTATTCTATCCT 100 38
        nagA NONE
        nagB NONE
HC660_RS17680 3381071 .. 3381083 +  -6.2  -4.39571   TCCCATAGGAATTCG                GCGG TTTCC CCGC                TTTTCACTTTCTCGC  73 217
HC660_RS17690 3385825 .. 3385839 +  -3.4  -3.85817   AAGCTGCCGCGGAAT               CAGCTG GAC CGGCGG               TTTATAACGAAGAGT  53 438
HC660_RS17705 NONE
HC660_RS17710 3389594 .. 3389613 + -12.2  -5.09762   ATCCTATGTAAAAAA            GCTGCCAT TTGG ATGGCAGC             TTTTATTTCTTACGA 100 30
HC660_RS17735 3392099 .. 3392114 +    -9  -4.20042   AAAGAACAGCGAAAA              CCCTCT GAAA AGAGGG               TTTTAAGATGTTGCT  83 51
HC660_RS17755 3400491 .. 3400530 +  -8.6  -3.16564   GCCCTCCCTCTTTAT  TATACAAGCGGGGCAGGT GTAT ACTTGTCCTGCCAGTATA   TTCGTGAGGTGAAAC  70 44
HC660_RS17760 NONE
HC660_RS17765 3402490 .. 3402525 + -16.9  -5.31275   CAGCGTAAAACAAAA    CAGCCCGGCGCCACA CAAAAA TGTGATGCCGGGCTG     TTTTTTATGATCCAG 100 33
HC660_RS17920 NONE
HC660_RS17925 3430748 .. 3430768 + -11.1   -5.1517   TTTGCGCAGAAAAAA            CTCCGGCTC ATA GAACCGGAG            TTTTTAATTTCTTTT  93 77
HC660_RS17995 3448595 .. 3448623 + -11.8  -5.63517   AAAGCTAAAATAAAA        GAAGCTTCGCAC CCTAT GTGCAAAGCTTC        TTTTTTATTTACCCG 100 33
        galU 3455957 .. 3455982 +   -12  -5.00196   TCTAAACATAAAAAA         GGCTATTGGA CATTCA TCCAATAGCC          TTTTATTATTTCAAC 100 36
HC660_RS18065 NONE
HC660_RS18070 3469637 .. 3469647 +    -4  -3.97834   GTGGTAAGGAAGGAG                 TCAT TTT ATGA                 TTTATGCTGAGATTC  57 107
HC660_RS18075 NONE
HC660_RS18080 NONE
HC660_RS18085 NONE
HC660_RS18090 3474440 .. 3474463 +   -14  -6.02919   AGATAATGATAAAAA          CACCTTTTGC CGCG GCAAAAGGTG           TTTTTTTATTTATAG 100 35
HC660_RS18105 NONE
HC660_RS18110 NONE
HC660_RS18115 3482159 .. 3482181 + -11.3  -4.26622   GGTAAGCAGCAAAAA          GGGTGC-GCC AATT GGCAGCACCC           TTTTGAATATGATTT  88 36
HC660_RS18125 3484891 .. 3484912 + -13.1  -5.97979   AGTAATTGATTTTAA           CGGAATGGT CTTT ACCATTCCG            TTTTTTTGTTCTTAT 100 52
HC660_RS18130 3485907 .. 3485927 + -11.2   -5.7946   ATATGCATAAAAAAA            GACTCCAG TTTCT CTGGAGTC            TTTTTTTATTGCACC 100 31
HC660_RS18160 NONE
        rbsK NONE
        rbsD NONE
HC660_RS18175 NONE
        rbsC NONE
        rbsB 3496775 .. 3496795 + -12.7  -5.56264   AAAAAATAATGCAAA            GGATCAGAT CTT ATCTGATCC            TTTTTTATGTTTAGC 100 32
HC660_RS18190 3497419 .. 3497445 +   -16   -5.4833   ACAAAATAACCAAAA         GGGATTCCGTTT ACA GAACGGAATCCC         TTTTTTCTTCGCTAA 100 32
HC660_RS18195 3497883 .. 3497906 + -13.9  -5.26119   TTTTTAATAGAGAAA          GCCCTGTCC CACACC GGACAGGGC           TTTTCTTTTTAAGAA 100 34
HC660_RS18215 NONE
HC660_RS18220 3503713 .. 3503736 +    -6  -4.70515   TGATGAAACAAAAAA          CTGCCTTC TGCTATTC GAGGGCAG           TTTATTTTCAGTATA  77 48
HC660_RS18240 3507805 .. 3507832 +  -3.5  -4.54821   AATACAAAACTGTCA       TAGGCT-CCG-GC ATAC GTACGGTAGCCTA        TTTTCTAATTCCCCT  64 39
HC660_RS18245 3508625 .. 3508646 + -10.9  -5.71712   ACACTGTCATTAAAA           GCC-GGCACA GCA TGTGCCTGGC           TTTTTTTGTGTGAAG 100 76
HC660_RS18250 NONE
HC660_RS18255 3511191 .. 3511201 +  -5.4  -3.96447   ATAGACGACGGGGGT                 GCAT CTG ATGC                 TTGATTTTTTGATAA  63 52
HC660_RS18260 3512442 .. 3512453 +    -3  -2.73364   TCTTCTTGGCTGGAT                CATA CAAT TATG                 TAATTAAAGTGAGGG  42 7
HC660_RS18265 3513166 .. 3513189 +  -9.5  -4.96848   CTTATAAAAATGCAG          CACCCGGAG TAATCC CCCCGGGTG           TTTTTCTATGAAACA  91 14
HC660_RS18270 3513572 .. 3513585 +  -3.9  -4.88736   TTCTTGCTCTCTTAA               TATAC ATAT GTATA                TTTTTCTAGCTAGTC  71 3
        chrS 3515879 .. 3515892 +  -2.4  -2.59191   TAAAGGAGAGAAACT               GATG AAAAAC CATC                CTTATCGGGATATGA  40 38
        chrB 3516469 .. 3516481 +  -2.7  -5.06414   AAGGAATGTCCGCCT                CATGA TCA TTATG                TTTTTATTCACAGCA  70 21
HC660_RS18290 3517006 .. 3517034 + -13.3  -4.07687   AGTTCCTCATTTATA        GAAAAAGCACCCT CAA AGGGTGCTTTTTA        TTTTGGGCCAGAAAT 100 25
HC660_RS18355 NONE
HC660_RS18360 3531477 .. 3531499 +   -12  -5.17576   AATAACCACAAAAAA           GCTGGCTCCT AAA AAGAGCCAGC           TTTTTTCCGTTCATA 100 36
HC660_RS18385 3534844 .. 3534866 +  -7.7  -4.23999   ACAGAAAATATAAAA           GAGAGTGGA AATCA TCCCCTCTC           TTATTTTACATGTGC  79 28
      blaOXA 3535705 .. 3535729 + -12.9  -4.94972   CTGTATTAGAATAAA          GCCTGCCTTTT ATC ACAAGGCAGGC          TTTTTCATTCTCCTA 100 32
HC660_RS18410 3547233 .. 3547256 + -13.9  -5.88565   TTGACCTATAAAAAA          GACTGCCGC ATTCCA GCGGCAGTC           TTTTTTTATTCTGGA 100 56
HC660_RS18425 3549789 .. 3549799 +  -2.4  -4.25104   AGCTGTCTATGTTTA                 CTGC ATT GCCG                 TTTTCATCAAGCACG  57 403
HC660_RS18455 NONE
HC660_RS18460 3554696 .. 3554719 + -13.9  -5.47218   CAGAATAGCTTGTCA          GACTGCCGG AATTTG CCGGCAGTC           TTTTTTTGCATAAAA 100 33
HC660_RS18490 NONE
HC660_RS18495 3562387 .. 3562409 + -12.8  -5.40072   CTGTAATATCATTAA           GAGATTCGGA CAC TCCGGATCTC           TTTTTTTGCGAACAG 100 35
HC660_RS18500 3563144 .. 3563179 + -12.8  -2.98873   TCAAAATTTCTAAGA    TAAAGCCGGC-CTCT GAATGGA AGAGCGCCGGCTTTA    ATATTTTTCATACAT  91 28
HC660_RS18515 NONE
HC660_RS18520 3565772 .. 3565804 +   -15  -5.31072   GACACGAATAGCAAA      GGTATGAGTTCGGT ATTGA ACCGGACTCATGCC      TTTTTATTATGTTCT 100 68
HC660_RS18525 NONE
HC660_RS18530 NONE
        pseC NONE
HC660_RS18540 NONE
        pseG NONE
        pseH NONE
        pseI 3573139 .. 3573183 +   -21  -3.67517   GATGAAATGAAAAAA CGGCACCCTGATTGTTAG ATAAATCCG CTAACAGTCAGGGTGCCG TTTACAGTATTAATA 100 210
         cls 3575334 .. 3575353 + -12.8  -4.59773   TAAGATGTGCCAATC            CCCCGGTC TTAT GGCCGGGG             TTTTTCAGCATGGCA 100 38
HC660_RS18570 3575909 .. 3575947 + -14.9   -3.6849   ACGTACAGCAGCTAT  TAAGTAAAAAACCCGGAG CTTC CTCCGGGTTTTTT-CTTG   TTATTCCGCTTCGCT 100 23
HC660_RS18685 3595470 .. 3595490 +  -9.8  -6.23545   AGTCATAAAAAAAAA            TCCTTCTC ATGAA GAGAAGGA            TTTTTTTTATTTCCC 100 33
HC660_RS18780 3610270 .. 3610290 +    -9  -4.88407   TTTGCTGCAAAAAAA            GGAAGCCT CTTAA GGGCTTCC            TTTTTCATTAGATCA  91 13
HC660_RS18800 3613127 .. 3613139 +  -4.7  -4.42062   TTTTTGAGGAAAAAA                GGGGG ATG CCCAC                TTTCTTTGCCGAATC  67 44
        racA 3613794 .. 3613811 +  -8.4  -5.26875   ACGTAAAGTAAAAAA             GCTCCC CGTAAA GGGAGC              TTTTTTGATTACGCA 100 35
HC660_RS18865 3625089 .. 3625118 +  -5.8  -5.87996   GAAACAAATAAAAAA       GACTTGTCCGCTT TTGAC AAACGG-CAAGTC       TTTTTTTATTACTTC 100 70
         cls NONE
        uvsE NONE
HC660_RS18900 3633645 .. 3633666 + -11.7  -4.51174   AACTTACATAAAAAA           GGATAGACA GTGA TGTCTATCC            TTTTCCTTATGCTCG 100 39
HC660_RS18945 3646138 .. 3646159 +  -8.8  -3.67976   CTAACAAGATAAAAA           CAAGGACA TATTGC TGTCCTTG            TTTCCACTTAATCAA  74 29
HC660_RS18970 3650868 .. 3650890 +   -15  -4.66609   AGGTTCTCCGGAAAA           GGGCATAGTA ATT TACTATGCCC           TTTTTAACTAAAATA 100 40
        albA NONE
HC660_RS18980 NONE
HC660_RS18985 NONE
HC660_RS18990 NONE
HC660_RS18995 NONE
HC660_RS19000 NONE
HC660_RS19005 3657743 .. 3657755 +  -5.5  -3.29263   ATCACTTGTGCGATA                CACGG TCA CTGTG                TTGTCGCCGGGCTGT  56 104
HC660_RS19020 NONE
HC660_RS19025 3661897 .. 3661912 +  -7.5    -5.626   TGCTATGATCTAAGA              CCGCC TTTATC GGCGG               TTTTTTTGTCCCCTC 100 28
HC660_RS19040 3666071 .. 3666097 +  -9.5  -3.90574   GGAATCAATAAAAAA         TAACCCGGC TGCTTAAAT GCCGGGTTA         TTTAATATGGTTCTT  81 30
HC660_RS19060 3668174 .. 3668194 +  -6.8  -4.87037   ATAATCTTTTATAAA            GCCGGC GCTTCGCAA GCCGGC            TTTTTCATCTCTATT  81 37
HC660_RS19105 3676750 .. 3676775 + -10.5  -4.98672   TTTGCCATAAAAAAA         TCCCCTTTTCC TTTT GGAAAAGAGGA          TTTTCTGTTTTTGCG  93 78
HC660_RS19130 3681813 .. 3681834 + -17.3  -4.76892   TATGTATAATATCTC           CTCCCGCCG TAGA CGGCGGGAG            TTTTTCGATTCCTCT 100 32
        bacG 3682724 .. 3682741 + -11.3  -3.00003   AAGCATATAAAAAAA             TCCCGCT TTTT AGCGGGA              TACTTCTTGTAATGA  79 31
HC660_RS19175 3691461 .. 3691482 + -15.9  -5.09762   CGTAACGCATAAAAA           GCTCTCCGG CCTC CCGGAGAGC            TTTTTCTATTGCGCT 100 29
        gerQ 3706372 .. 3706399 + -12.2  -5.72622   GATAAAGAAAAAAAA        GCCAATC-CTCAT GAT ATGAGAGATTGGC        TTTTTTCTTTATAGA 100 36
HC660_RS19270 3710043 .. 3710059 + -10.1  -4.89339   TACTCAAATAAAAAA              GCGCAGG TCA TCTGCGC              TTTTTATAAATCCTT  93 30
HC660_RS19300 3714167 .. 3714189 + -11.3  -5.88565   ATCATAAACAAAATC           GGCTGCCTT CCAAA GAGGCAGCC           TTTTTTTATTCTCGG 100 34
HC660_RS19320 3718944 .. 3718962 +  -8.8  -3.00046   CTCTTTTACATGACC             GATCGCCC ACA GGCCGATC             TCGTATTCTTTTTTA  66 493
HC660_RS19335 3722645 .. 3722670 +   -14  -4.65895   GTTGAATAAAAAGCA         GCCCTGCCGA GAAACA TCGGCGGGGC          TTTTTCCATACAGGC 100 32
        ywcE 3726700 .. 3726750 + -14.3  -3.33492   AAGCGAAGCAGCAGC TGAAACAGTAAAAAACCCTCTTC TGGAC GAAGAGGGTTTTTTGCTTATTCG TTGTGGCCTGAGTGC 100 23
HC660_RS19380 3731459 .. 3731486 + -16.4  -5.14563   AGGATAGAAACAACA        GAGCCCAAAGCG TGAG CGTTTTGGGCTC         TTTTTTAATAGGAAA 100 34
        sinI 3736112 .. 3736130 +  -8.9  -2.86689   ACTTTAGAAAAAAGG             GCAGCTT TGCAT AAGCTGC             ATTTGGTGAGGTTTT  68 241
HC660_RS19410 NONE
HC660_RS19415 3738176 .. 3738205 + -14.5  -4.25681   TCAGGATTAAAAAAG       GCTCTCTAAACAG ATTT TTGTTTAGAGAGC        TTTCTTAGGTTACGT 100 31
HC660_RS19455 NONE
HC660_RS19460 3746488 .. 3746516 + -11.9  -4.95167   TTATGTAAGAAAAAA        CACCATTTCTTAT TAA ATCAGAAATGGTG        TTTTATTATTAATTA 100 33
HC660_RS19480 3750210 .. 3750221 +  -3.6  -5.76633   AAGAAAAAGCTGTTC                TGGC AAGG GCCG                 TTTTTTTATGTCTCC  89 42
HC660_RS19490 3750747 .. 3750780 +  -4.7   -5.8096   CAGATCATTTCTACA     TA-AAAAGCTGCCC CTGAACC GGGCAGCTTTTCTC     TTTTTATTTTTTCTG  93 23
        glxA 3752478 .. 3752510 + -16.6  -4.12532   TTCAGCGGTGAAAAT      CAAAGAACGTACAT TTTTC ATGTACGTTCTTTG      TTTATCTATACCAAC 100 30
HC660_RS19520 NONE
HC660_RS19525 3759501 .. 3759523 + -10.7  -5.60864   TGACAAACAAAAAAA           CGCTTTTGA TGATC TCAAAAGCG           TTTTTTTCATATATA 100 38
HC660_RS19540 3762086 .. 3762114 + -12.4  -5.24799   GGTACCGCGTGCATT        GAGCCACGTCCC TTATC GGGATGCGGCTC        TTTTTGTGTTTCTAA 100 217
HC660_RS19545 3763397 .. 3763423 + -12.5  -5.42862   AATTTGATGTCCTGA         CGCTTATGAAA TCGGC TTTCATAAGCG         TTTTTTTGCAGGTAT 100 39
HC660_RS19550 3764909 .. 3764928 +  -9.3  -5.52986   TATGAAATAAAAAAA            GACGGCA CATCGC TGCCGTC             TTTTTTTAATCCACT 100 31
HC660_RS19565 NONE
        dltA 3768745 .. 3768755 +  -2.4  -3.88232   TGACAGGAAACGCAT                 CCGC GAA GAGG                 TTCTTGTATGACGCC  52 4
        dltB NONE
        dltC NONE
        dltD NONE
HC660_RS19590 3772216 .. 3772238 +   -15  -5.21236   TGAACAAATGAATGC           GCAGGAGAAT TAA ATTCTCCTGC           TTTTTCTTATAAATT 100 13
HC660_RS19595 3773469 .. 3773485 + -15.1  -5.71983   CAAATAAACAAAAAA              CGGCCCG AAA CGGGCCG              TTTTTTTATGCTTCA 100 34
HC660_RS19635 3781627 .. 3781647 +  -6.1  -5.07011   TATTAACACCAAGAA            CAGGACTTT TTT GACGTCCTG            TTTTTCATTTCTCTA  80 35
HC660_RS19675 3787390 .. 3787412 + -12.1  -5.27477   GGCTTATCAAGAAAA           GCTGTCTTC CCTAT GAAGACAGC           TTTTTTCATTCAAAT 100 10
        cimH 3796082 .. 3796111 +    -8  -5.22039   ATTGATAGGCTGAAA       GCAAGTTC-TTCG GATGA CGAAAGAGCTTGC       TTTTTTGCATTTCCG 100 36
HC660_RS19710 NONE
HC660_RS19715 3798131 .. 3798152 + -11.5  -5.68438   TGACGGCGGAGGGGG           CGGCGGCGA TTAA TCGCCGCCA            TTTTTTATTTCATCG 100 13
HC660_RS19745 3804210 .. 3804229 + -13.6  -5.00616   AATAGTAGCTGAAAA            GGGTGCCT GCGA AGGCACCC             TTTTTTAGGAAAAAG 100 36
HC660_RS19760 3806921 .. 3806936 +    -4  -2.79205   CGAACAGGTCTAAAA              TCAATC TGCC GGTTGA               CGTTTTCTTTTCCTA  45 28
HC660_RS19765 NONE
HC660_RS19770 NONE
HC660_RS19775 NONE
        pepT 3810632 .. 3810651 +  -9.3  -5.08824   GCGTAAGCTGAAAAA            CCAGTCC GAAAAA GGACTGG             TTTTTTGCATGAAAA  91 35
HC660_RS19785 3811426 .. 3811455 + -15.9  -3.72324   GACATACCTTATAAT       TGAAAAGGCTGCA GATA TGCAGCCTTTTCG        TTATTCCTGAAACTA 100 41
HC660_RS19795 3813545 .. 3813569 + -13.7  -5.56264   AGATTGTTCACGCAA          GCTCTTCCTTA TCC TGAGGAAGAGC          TTTTTTATATTTGAA 100 221
HC660_RS19800 3814758 .. 3814787 +    -8  -5.28778   TAAAGAACAGAAACA       CACACTTGATTCC TTGGC GGGA-CAAGTGTG       TTTTTTATGCCTGCT 100 38
HC660_RS19835 3823095 .. 3823119 + -11.5  -5.37865   TGGTAGAAAAATGGA          GCCATATCCCT TTT AAGGATATGGC          TTTTTTGATTATTAA 100 35
        citN 3827851 .. 3827872 + -13.1    -5.243   TTTAACATGAGAAAA           GGATTTCCG CTGC CGGAAATCC            TTTTTTGGTCATTTA 100 36
HC660_RS19865 3830583 .. 3830612 + -10.1  -3.37654   CAGCCATCACAAAAA       TGACCTGC-CCC TTTAACT GGGAGCAGGTCA       TTCATCATTTATTCG  78 10
HC660_RS19880 NONE
HC660_RS19885 3834305 .. 3834323 + -11.8  -3.37522   AAGTGGGGAAAATCA             GTGTGACA TCT TGTCACAC             TTGATTACATCCCAT  84 20
HC660_RS19960 3851337 .. 3851369 + -14.2  -4.19258   AAGCCAAACAAGATA      GAGGCGTCCCCTTA CTGAT TAAGGGAGCGCCTC      TTTTGGGTAACATGT 100 89
        hutP 3860828 .. 3860866 +   -17  -4.99035   GATCTTAGACGATAG  GGGGCTATGC-GTGAAA TCAAAT TTTCACAGCATAGCCCC   TTTTTGTATGGGTGC 100 52
        hutH NONE
        hutU NONE
HC660_RS20045 3865359 .. 3865378 +  -3.6  -3.21934   GTCAACAGGGAGGGA            GGCATTTA TGAA TAAATACC             CTTTTCTCAGAGAGG  49 11
HC660_RS20050 NONE
HC660_RS20055 3867831 .. 3867857 +    -8  -5.05606   CCTGTAATCAAAACA         GCACACCCCA CTCAGGA TGGGATGTGC         TTTATTTTTATTCCG  89 34
       cotNE 3884848 .. 3884888 +  -9.7  -3.52874   CAAGAAAAGAAAAAA  GCGGAATACGATTCTCC AGATGTC GGAGTTTCGTTTTCCGC  TATTCTTATGTGCAG  79 43
HC660_RS20150 3885442 .. 3885467 + -10.5  -5.45652   AGTAGCATATAAAAA         GCTCAACACAA TGTT TAGTGTTGAGC          TTTTTTCTTACCGGT 100 36
HC660_RS20160 3887020 .. 3887043 +  -8.9  -5.37345   AAAAAATAAAGAAAA          TGGCACAGT TATGAC ACTGTGCCG           TTTTTTATGATTCAC 100 32
        iolR 3904440 .. 3904452 +  -2.7  -2.88887   CGTTTACAATAGTAT                TGAGA GTC TTTCA                TCAATTTTATTTCAG  42 41
HC660_RS20245 3905418 .. 3905441 + -13.2  -5.27938   TCGCATAAGAAAAAA          CAGCCTTCTC CATT GGGAAGGCTG           TTTTTATTTGCCCAT 100 33
HC660_RS20250 NONE
HC660_RS20255 3906655 .. 3906675 +  -9.8   -5.9667   ATGTCCTAATTAAAA            CCTTACTC CGGGC GAGTAAGG            TTTTTTTATGTTTTT 100 43
HC660_RS20260 3908341 .. 3908365 + -10.8  -5.64873   TCATAAATAAAAAAA          GGAATCGTCT CATTT GGACGATTCC          TTTTTTATTCTTACA 100 35
HC660_RS20275 3911636 .. 3911657 + -11.6  -5.93252   GAAGAGACGAAATAA           GAGAGGGG ATTCAG CCCCTCTC            TTTTTTGTTTTTCAA 100 26
HC660_RS20285 3914319 .. 3914345 + -13.9  -5.00895   AATAAACATGGTTCA         GAGAATCTGCA TCCCT TGCAGATTCTC         TTTTTCTATCATCCC 100 36
HC660_RS20300 3915869 .. 3915894 +   -12  -5.07523   TGAAAACCTGAAAAA         GTCTAGACTC CAATAT GAGTCTAGAC          TTTTATTTATCTATG 100 42
HC660_RS20320 3920168 .. 3920192 + -11.5  -5.28683   TGCACACCATAAAAA          CCCATGCAGAT TTA ATATGCATGGG          TTTTTTGATGTTAAT 100 57
HC660_RS20335 NONE
HC660_RS20340 3923208 .. 3923227 + -12.2  -4.74504   TTAGCACAGAAAAAA            GCAGACTG TTCC CAGTCTGC             TTTTTCCATTACGAT 100 144
        gntR NONE
        gntK 3927983 .. 3927996 +  -6.7  -2.59421   TGACATGAAGGGGAG               GGCAT TACC ATGCC                GTTAATCATTGTTGC  56 45
        gntP NONE
         gnd 3930783 .. 3930816 +  -9.6    -5.626   AAACTAATAGATAAA     GCTGACAGCTGG AGCTTTTATA CCAGCTGCCAGC      TTTTTTTATAGGATA 100 34
        ahpC NONE
        ahpF 3933179 .. 3933211 + -15.7  -5.42259   TAACTAATATGAAAA      GCCGCTATGCTGC TCGAGCT GCAGTATAGCGGC      TTTTTTTGCCCATCA 100 34
HC660_RS20395 3937558 .. 3937597 + -16.6  -5.24531   AAATTACAAAACAAA  CCTCCACTGAGTACAAAG CTAT CTTGGTACTCAGTGGAGA   TTTTTTGTGACCACT 100 117
HC660_RS20410 3941563 .. 3941590 +  -4.1  -5.77632   GAAGTGAGGGATGTG        GGGTTCAGGGA TTATAT TCTCTGGGCTC         TTTTTTTGTGGTTTT  89 34
HC660_RS20440 3947998 .. 3948022 + -12.2  -6.23545   ATTATCAGCAATAAA         GCCGG-CGTTC GATT GAACGGCCGGC          TTTTTTTTATTTCAA 100 27
HC660_RS20475 NONE
HC660_RS20480 3953810 .. 3953829 + -12.1  -4.18401   TTGGATAATAAAAAA            CCCCCGC TGGGAT GCGGGGG             TTTTCACATGTCTAC  95 33
        rocR 3959352 .. 3959377 +  -6.8  -5.08824   ATCCATGTATTTTCT         ATGGAACGGG CGTGAC CCCGTTCCGC          TTTTTTACATAAAAA  83 117
HC660_RS20570 3971346 .. 3971360 +  -8.6  -4.07107   ATAAGGGGCATTTTC               GGAATG CAC CATTCC               TTTGTGATATCTTCT  79 318
HC660_RS20580 3971596 .. 3971608 +  -2.7  -3.19255   ATACTTGCTTACATG                TATCG GAA TGATA                TTAAGTATATGTTAG  44 53
HC660_RS20585 3972856 .. 3972879 +  -6.7  -5.24129   TTCAGCATAGAAAAT          G-GGCGGGGA ACTTG TCTCCGCCTC          TTTTTTATGAAAAAA  88 31
HC660_RS20615 3977800 .. 3977830 + -14.1  -3.59468   TTCGATGAAATAAAA       GAAGCAGCAAAGG CTCTC CCTTTGCTGCTAC       TTCTGCTGTTCTTTT 100 28
HC660_RS20625 3979351 .. 3979370 + -13.6  -5.29445   CAGAATAATAAAAAA            GCATCCCG CTCC CGGGATGC             TTTTTCTTATTCGCC 100 33
HC660_RS20635 3981575 .. 3981596 +  -8.8  -4.95484   TTAAGTTGGAGTAAA           GAGTGCTT GTGTGA AAGCACTC            TTTTCTTTGATCATA  91 27
HC660_RS20650 NONE
HC660_RS20655 NONE
HC660_RS20660 3986385 .. 3986400 +  -2.4  -5.95286   CCGCAAACGCCTCTG              CGGCGG GCAG CTGCCA               TTTTTTCTTTTTGAT 100 125
HC660_RS20670 3988155 .. 3988172 +  -5.5  -5.42975   ATTTGCATTGGAAAA             GCAGGTT TCAA ACCCTGC              TTTTTATTTGTCTGC  83 262
HC660_RS20685 NONE
HC660_RS20690 3990629 .. 3990645 +    -8  -5.03314   TTTCGTTTTAAAAAA              GAGCTC TCATT GAGCTC              TTTTTTAAAAATAAC  89 480
HC660_RS20720 3996786 .. 3996798 +  -4.9  -3.57144   AAGGTTTGAACATAA                TGTTA AAA TAACA                TTTCAAACTCAAACA  57 81
HC660_RS20730 NONE
HC660_RS20735 3998266 .. 3998292 +  -6.5  -3.24925   TCTTATTGAACTAAA         GGGGCGTCCAT AAATA ATGGGTTCCCC         TTAATACTATGGAAT  61 93
HC660_RS20740 3999130 .. 3999154 +  -4.4  -4.00445   TTTTAAAAGAACTCC          TTTTGGAAAA ACGAA TTGTCCAAAA          TTATTATTACTAGTA  59 467
HC660_RS20755 4001681 .. 4001705 +    -8   -4.2679   GTTGTAAAATATAAA         TAAAGAG-CCC ATTT GGGACTCTTTA          TTTTCGTAACCATTG  79 238
HC660_RS20775 NONE
HC660_RS20780 NONE
HC660_RS20785 4008464 .. 4008497 + -13.3  -4.88711   GCCTTACAAACATTA     GAAAGCAGCAGGG ATTAAACA CCTTGCTGCTTTC      TTTTTGATCTCTTAT 100 8
HC660_RS20795 4010963 .. 4010987 + -11.5  -3.78409   AGCAGATATAAAAAG          TCAGTGCGG CGTTTAA CCGCACTGA          TTTCAATTCAATTCC  86 30
        yyaC 4021131 .. 4021147 +  -3.7  -5.61881   CAATCACTTTTTGCA              CAAGC GGTTCAA GCTTG              TTTTTATTTTTCAAA 100 329
HC660_RS20870 4023170 .. 4023202 + -13.6   -4.3467   AATTTCCTTTTAGCG      AAAAAGCTCTCCTG GACAG CAGGAGAGCTTTTA      TTTTGGTATGCGAAT 100 39
        rpmH 4030534 .. 4030557 -  -8.9  -5.22039   CTTAAAGTGAAAAAA          GACCACTGA CATTAT TCAGTGGCC           TAAGCTGATAATACT 100 25
        rnpA 4029956 .. 4029967 -    -3  -4.46212   TCTCTTATTACAAAA                CATA CTTG TATG                 TATTTTAGCATCTTT  60 115
        yidC NONE
HC660_RS20895 4028471 .. 4028499 - -10.4  -5.71712   TTCTATACAAAAAAA       CCGAAGCTCCGAT TTTT ACCGGA-CTTCGG        TTTTATGTTATCTTT 100 33
        mnmE NONE
        mnmG NONE
        rsmG NONE
         noc 4023175 .. 4023197 - -13.5  -4.65895   CCTTTTAGCGAAAAA           GCTCTCCTG GACAG CAGGAGAGC           TTTTATTTTGGTATG 100 28
         soj NONE
       spo0J 4020836 .. 4020854 -  -4.6  -5.56263   ATTATAAAACAAAAA             CCATCT TCAATAG AGATGG             TTTTCTTTCATTACG  84 36
HC660_RS20850 4018619 .. 4018631 -  -4.1   -4.7173   CATCATACCCAAAAA                GAAGA ACA TCCTC                TTATTTCCATTTACT  68 26
HC660_RS20845 NONE
HC660_RS20840 NONE
        ychF 4014991 .. 4015001 -  -2.6  -3.27476   ATGGGCAAGGAGCAA                 TAAT TCT ATTA                 CTCACAATTTTATAT  46 75
HC660_RS20830 NONE
         ssb 4014103 .. 4014117 -  -4.2  -2.64416   TATTCTCATTAGAAT               GGAAGA TCA TCATCC               GAGATGTCAATCGGC  47 4
        rpsR 4013775 .. 4013800 - -14.1  -5.24129   TCCCCCTATAAAAAA         GAGCAAGAACC CGAA GGTCCTTGCTC          TTTACGTATCAGCTT 100 39
         xth 4012964 .. 4012987 -   -14  -5.31275   TTTCATCATAAAAAA          GCAGTAAGGA TCAA TCCTTACTGC           TATCACGTCATATAT 100 33
HC660_RS20810 4011984 .. 4011997 -  -3.9  -2.61602   TGAAGTTATAAGGGA               TGAAA TGCA TTTCA                GTTCAAGCTTTTTTT  45 23
HC660_RS20805 NONE
HC660_RS20800 4010962 .. 4010988 -  -8.7  -5.06505   AAGCAGATATAAAAA         GTCAGTGCGGC GTTTA ACCGCACTGAT         TTCAATTCAATTCCT  91 27
HC660_RS20790 4008464 .. 4008497 - -11.1  -2.89797   GCCTTACAAACATTA     GAAAGCAGCAGGG ATTAAACA CCTTGCTGCTTTC      TTTTTGATCTCTTAT  79 6
HC660_RS20760 4001681 .. 4001705 -  -9.4  -4.45168   GTTGTAAAATATAAA          TAAAGAGCCC ATTTG GGACTCTTTA          TTTTCGTAACCATTG  86 23
HC660_RS20750 NONE
HC660_RS20745 3998809 .. 3998833 -  -6.5  -4.93595   AGAAAAACTGAAAAA          CACCGTTCT GTTGAGT AGAACAGTG          TAAAAAAATATTCCT  81 124
HC660_RS20715 NONE
HC660_RS20710 3994214 .. 3994233 - -10.8  -5.73563   AGGAAATGAAAAAAA            CGTACATG CGGG CATGTACG             TTTGGGCAACTTTTA 100 52
HC660_RS20705 3991808 .. 3991829 -  -7.3  -5.30155   TGACGAATGAAAAAA           GAGTAGACC TTTC AGTCCACTC            TTAAATAAATCTTAT  91 165
HC660_RS20695 3990609 .. 3990664 -  -4.3  -5.86609   CGAAAAAAAGAAAAA GTGAATTTCGTTTTAAAAAAGAGCTC TCATT GAGCTCTTTTTTAAAA-ATAACACGC TAACCTTTCCACATG  93 70
HC660_RS20680 3988155 .. 3988172 -  -5.5  -4.13945   ATTTGCATTGGAAAA             GCAGGTT TCAA ACCCTGC              TTTTTATTTGTCTGC  65 122
HC660_RS20665 3986294 .. 3986316 - -14.2  -5.63517   CGTTTAAATAAAAAA           GGAGTGAGCG TAA CACTCACTCC           CTTTTCTCATTGATT 100 32
HC660_RS20645 3982930 .. 3982966 -  -3.2  -3.23274   TCGCCTATAAGTGAA    GAATACCTATCTTC AGTCCAGAA AAAGATAAGCATTC    TTTCTTGTCAGCGAA  48 57
HC660_RS20640 3981575 .. 3981596 -  -8.8  -3.74747   TTAAGTTGGAGTAAA           GAGTGCTT GTGTGA AAGCACTC            TTTTCTTTGATCATA  76 308
HC660_RS20630 3979351 .. 3979370 - -13.6  -5.68489   CAGAATAATAAAAAA            GCATCCCG CTCC CGGGATGC             TTTTTCTTATTCGCC 100 32
HC660_RS20620 3977800 .. 3977830 - -14.1  -4.93877   TTCGATGAAATAAAA       GAAGCAGCAAAGG CTCTC CCTTTGCTGCTAC       TTCTGCTGTTCTTTT 100 22
HC660_RS20610 3976988 .. 3977008 -  -9.1  -4.55798   CATTGCAAACGAAAA            GACATTCTT TAA AAGAATGCC            CATCACTTCTTATTC  86 35
HC660_RS20605 NONE
        gdpP NONE
        rplI 3973371 .. 3973394 - -15.4  -5.88565   CGTAGAATAAAAAAA          GAGGCTTGGA TCAA TCCAAGCCTC           TTTTCTATTAAGCTT 100 33
HC660_RS20575 3971064 .. 3971082 -  -2.3  -3.93262   TCTAACAAACTGAAA            GCCTTCGC TGCC GCGG-GGC             TTTTTCAGCGGGTAC  52 47
        dnaB 3969295 .. 3969316 - -10.9  -5.52384   TCTGGATGAAAAAAA           CCCCAAGAA GAAG CTCTTGGGG            TTTACGCACCGGGCG 100 27
        purA 3967247 .. 3967264 - -12.7  -6.23545   TTCAAACAAAAAAAA             GCCCCTG AAAA CAGGGGC              TTACGGGTATTCTGC 100 41
HC660_RS20550 NONE
HC660_RS20545 3966828 .. 3966866 - -15.6  -3.27022   CGGACCTTACAGTAA  TTTGTCTG-GAGAGCTG TCGTGT CAGCTCTCGCAGACAAA   TAAGGAATTTAGCAA 100 57
HC660_RS20540 NONE
HC660_RS20535 3966603 .. 3966624 -  -8.7  -5.79595   TCTTAAAAGAAAAAA           CGCACCTAC GATT GCAGATGCG            TTTGGTAAGTGGCTC 100 33
        walR NONE
        walK NONE
HC660_RS20520 NONE
HC660_RS20515 NONE
HC660_RS20510 3960705 .. 3960723 -    -3  -3.53281   CACAAGAAAAAATTA             TACAGCGC AAA GCGGAGTA             GCCTTTTTCGGGTCG  47 4
HC660_RS20505 3959394 .. 3959417 - -13.2  -5.36441   TTTTTACATAAAAAA          CAGCCTGGCA TTGG TGCCAGACTG           CTTCTATTATCTTCC 100 32
        rocD 3956415 .. 3956430 -  -3.9    -2.508   AAACGAAGTGAATAT              CCCGC CATGAT GCGGA               TTTATGCCTTTTGCA  44 27
HC660_RS20490 NONE
        rocF 3953810 .. 3953829 - -12.1  -5.55769   TTGGATAATAAAAAA            CCCCCGC TGGGAT GCGGGGG             TTTTCACATGTCTAC 100 37
HC660_RS20465 NONE
HC660_RS20460 3949921 .. 3949938 -  -4.8  -2.68729   GATAAGCAGTATAAC             GGCTCC CAAGTC GGAACC              CCCTTCACCTTAAAG  49 35
HC660_RS20455 NONE
HC660_RS20450 NONE
        fdhA 3947998 .. 3948022 - -12.2  -4.27441   ATTATCAGCAATAAA         GCCGG-CGTTC GATT GAACGGCCGGC          TTTTTTTTATTTCAA  95 32
HC660_RS20435 NONE
        rlmH 3946584 .. 3946610 -    -3   -5.3104   TTACCAAAAATAAAA         TAGCCTCACT TTAAATT AGTAAGGCTG         TTAATTCTTTTAATA  73 83
HC660_RS20425 3945268 .. 3945293 -  -5.5  -5.05782   ACTTAGTGTAAAAAA         CGCCTTACTAA TTTT CTAATAAAGCG          AGTTCCATTTATACA  78 34
HC660_RS20420 NONE
HC660_RS20415 3942138 .. 3942148 -    -4  -5.11937   AAGAAGCTTAAAAAA                 CTAA AAT TTAG                 CACTTGGAAAAAATA  73 226
HC660_RS20405 NONE
HC660_RS20400 3937696 .. 3937715 - -10.8  -5.39721   TTAGTACATAAAAAA            GCTACTTC ACGA GAAGTAGC             TCCATCTTATTAAAT 100 35
HC660_RS20390 NONE
HC660_RS20385 3933231 .. 3933267 - -11.6  -4.72272   TTTGCCCATCAAAAA    CCCGAACCAGGCACTT CGGTT AAGTGCTCGCTTCGGG    CCATCTGCTTTATAA 100 35
HC660_RS20350 NONE
HC660_RS20345 3923208 .. 3923227 - -12.2  -5.39721   TTAGCACAGAAAAAA            GCAGACTG TTCC CAGTCTGC             TTTTTCCATTACGAT 100 34
HC660_RS20330 3920168 .. 3920192 - -11.5  -4.95155   TGCACACCATAAAAA          CCCATGCAGAT TTA ATATGCATGGG          TTTTTTGATGTTAAT 100 458
        yxaF 3918346 .. 3918364 -    -6  -3.61103   TAATTGTAGGGGAAA             GGATAACA AAT TGCTACCC             TTTTTTTCTCACCAA  62 20
HC660_RS20310 3917228 .. 3917251 -  -8.8  -5.18726   CCTTCACAATAAAAA          GCCAGGCTTC ACAG GAAGCCCGGA           GATATTATGGTTTCA 100 30
HC660_RS20305 3915869 .. 3915894 -   -12   -4.7416   TGAAAACCTGAAAAA         GTCTAGACTC CAATAT GAGTCTAGAC          TTTTATTTATCTATG 100 36
HC660_RS20290 3914324 .. 3914340 -  -6.6  -3.49102   ACATGGTTCAGAGAA              TCTGCA TCCCT TGCAGA              TTCTCTTTTTCTATC  63 113
HC660_RS20280 3911636 .. 3911657 - -11.6    -4.086   GAAGAGACGAAATAA           GAGAGGGG ATTCAG CCCCTCTC            TTTTTTGTTTTTCAA  90 37
HC660_RS20270 3910439 .. 3910455 -    -8  -5.19328   ATCGGATAAGAAAAA              GAGAGG ATCAG CCTCTC              TTTTGTCCTGCATCA 100 16
        htpG 3908341 .. 3908365 - -10.1  -6.02919   TCATAAATAAAAAAA          GGAATCGTC TCATTTG GACGATTCC          TTTTTTATTCTTACA 100 36
HC660_RS20235 3901755 .. 3901785 -  -8.3  -2.94045   CTATGGTAAGAATGA      GTCCGAACAGCGCA GAGA CACGCCGTTCGG-C       TGTTCGTCGTTTAGT  67 36
        iolB NONE
        iolC NONE
        iolD 3897965 .. 3897975 -  -6.8  -3.01712   GCCTCCCCTCTAATA                 CTGC TTA GCAG                 ATTCGAGCATTTTCT  58 9
        iolE NONE
        iolF NONE
        iolG NONE
HC660_RS20200 3893714 .. 3893756 - -15.8   -2.5547   ATTTTTGATATGAAG GGAGTTCGGCAGGA-A-GGC TGTTC GCCATATCCCGCCGAACTCC ATGCTCAGCTTATGC 100 35
        iolI NONE
        iolJ 3891922 .. 3891936 -  -9.2    -5.626   CACCGCACAAAAAAA               CCGCCA TCT CGGCGG               TTTCTGGTCTCTTTA 100 38
        yxdJ NONE
        yxdK 3890109 .. 3890143 -  -3.7  -4.96848   CGTTCGACATAAAAA     TTCCCCTTGAC GTAAATCCATGTT ATCAAGGGGAA     ACAAAACGAGCTATG  71 60
        yxdL NONE
        yxdM NONE
HC660_RS20165 3887020 .. 3887043 -  -6.7   -5.3472   AAAAAATAAAGAAAA          TGGCACAGT TATGAC ACTGTGCCG           TTTTTTATGATTCAC  89 37
HC660_RS20155 3885442 .. 3885467 - -10.5  -5.01497   AGTAGCATATAAAAA         GCTCAACACAA TGTT TAGTGTTGAGC          TTTTTTCTTACCGGT  93 33
HC660_RS20140 NONE
HC660_RS20135 NONE
        yidA 3882511 .. 3882531 - -14.1  -5.52347   AATAAAACGAAAAAA            TCCAGCCTT TAG AAGGCTGGA            CTTTTTATTTAGCCA 100 30
        yxeI 3881355 .. 3881387 - -17.1   -5.8187   TATCTAATAAAAAAA      CAGCTGACTCCGGAT TCA AACCGGAATCAGCTG      ATTGAGTCAATTAAT 100 36
HC660_RS20120 NONE
HC660_RS20115 NONE
HC660_RS20110 NONE
HC660_RS20105 NONE
HC660_RS20100 NONE
HC660_RS20095 NONE
HC660_RS20090 3874127 .. 3874144 -  -9.9  -2.62735   AGACCGGGGACACGA             CGGGAAT CAGT ATTCCCG              CAAGCACTGGCGCAA  74 272
HC660_RS20080 3872294 .. 3872320 -  -3.7  -4.84529   TGAGAAACTGAAAAA        CGCTCTGGCACA GATC TGC-CCAGAGCT         TATTTTTCCCACTTC  68 25
        deoR NONE
        deoC 3870432 .. 3870468 -  -4.3  -4.86731   TCCCCGGAAAGAAAA    GCAGGGCACGGAAAGCA ATT TGCCTTCCGTCTGCTTC    TTAATAATTGTCTCC  73 26
        nupC NONE
HC660_RS20060 3867831 .. 3867857 - -10.9   -3.8125   CCTGTAATCAAAACA         GCACACCCCAC TCAGG ATGGGATGTGC         TTTATTTTTATTCCG  84 33
HC660_RS20020 3858180 .. 3858213 - -18.3   -4.1899   TCATCTTATGTAAAA     GGAAAAAGCGCCTTC CCTC GAAGGCGCCTTCTCC      ATCTTATTTAGATCC 100 29
HC660_RS20015 NONE
HC660_RS20010 3856818 .. 3856831 -  -3.7  -2.50113   GACGATGTGATCAAT               GGCTG ATGT CTGCC                GATTGACTGCGTCTG  44 418
HC660_RS20000 NONE
HC660_RS19995 NONE
HC660_RS19990 3854862 .. 3854883 - -11.7  -5.66684   GAATTTATAAAAAAA           CTCCAAAGA CACT TCTTTGGAG            GGGGAAAATTTATTT 100 35
HC660_RS19980 3853059 .. 3853075 -  -2.3  -3.43773   TTTTATATTTAAACA              GAATCTC TTA AAAATTC              TACGCTTATCCTGTC  46 2
HC660_RS19975 3852137 .. 3852160 - -11.8   -4.6902   TGATAATTGCAAAAA          CCTTGAAAGG TTCC CCCTTCAAGG           TTTTTCTTTATTATT 100 39
HC660_RS19970 3851337 .. 3851369 - -14.2  -3.36326   AAGCCAAACAAGATA      GAGGCGTCCCCTTA CTGAT TAAGGGAGCGCCTC      TTTTGGGTAACATGT 100 412
HC660_RS19955 3848413 .. 3848427 -  -4.9  -5.88061   AAAAAACCAAAAAAA               GGCCC ATTTA AGGCC               TTTACACTTTTTTCT 100 42
HC660_RS19950 NONE
HC660_RS19945 3840819 .. 3840844 - -12.7   -4.4959   CCGAATTAATTAAAA         CAGCTGTCAAA TATA CTTGACAGCTG          TTTTTGTTTATTATT 100 54
HC660_RS19935 NONE
HC660_RS19930 3838414 .. 3838438 -  -8.7  -5.00884   ATTTGTTCTAAAAAA          GCTTGTATC GCTTATT GATACAAGC          TTCATATTCTAAAAC  91 34
HC660_RS19925 3837825 .. 3837837 -  -6.3  -3.10545   TACATTCCAAAAGGA                TTCCT CCT AGGAA                AGCATCTACCAATAA  57 31
HC660_RS19920 NONE
HC660_RS19915 3837006 .. 3837024 -  -9.6  -4.78572   TTCTAAGTAAGAAAA             GAGAGGCT GAC AACCTCTC             TTTTTTTATTTAATG  90 31
HC660_RS19910 NONE
HC660_RS19905 3835471 .. 3835495 -  -3.5  -2.59355   GTTAAATAACAAACT          CATCTATCTTG AAA CAGGATAGGCG          GATATTTATCTATCG  43 0
HC660_RS19900 NONE
HC660_RS19895 NONE
HC660_RS19890 3834131 .. 3834145 -  -8.6  -4.85195   AAAAGAAGCGAAAAA               GACGTT CGA AACGTC               ACCTGCACCTTCAGT  89 182
HC660_RS19875 NONE
        dbpA 3830583 .. 3830612 - -11.5   -4.9218   CAGCCATCACAAAAA       TGACCTGCCCC TTTAACTG GGAGCAGGTCA        TTCATCATTTATTCG 100 30
HC660_RS19860 3827851 .. 3827872 - -13.1  -4.55023   TTTAACATGAGAAAA           GGATTTCCG CTGC CGGAAATCC            TTTTTTGGTCATTTA 100 38
HC660_RS19850 3824285 .. 3824299 -  -2.8  -2.71268   CTCTACGATACAGGA               GCGAAT CAA ATTCGT               CTATCCCAATGGCGG  41 16
HC660_RS19845 3823927 .. 3823944 -  -6.3  -5.63517   TTCCCAAATAAAAAA             GAGACAA CATA CTGTCTC              TTTTTTACTGTTTAC  89 30
HC660_RS19840 3823095 .. 3823119 - -13.7  -2.88667   TGGTAGAAAAATGGA          GCCATATCCCT TTT AAGGATATGGC          TTTTTTGATTATTAA  93 37
HC660_RS19830 3820084 .. 3820108 - -10.1  -5.07652   TTGCGGAAAACAAAA          GGAAAGCTC TTTATGG GAGCTTTCC          TCTTTCACTCATTTC  93 34
HC660_RS19825 NONE
HC660_RS19820 NONE
HC660_RS19815 NONE
HC660_RS19810 NONE
HC660_RS19805 3814758 .. 3814787 -  -5.8  -3.79177   TAAAGAACAGAAACA       CACACTTGATTCC TTGGC GGGA-CAAGTGTG       TTTTTTATGCCTGCT  64 30
HC660_RS19755 NONE
        galE 3804244 .. 3804265 - -14.5  -4.72272   CTTTTTTAGGAAAAA           GGCCTTCTC TGTT GAGAAGGCC            TCCATTCTTATTCCT 100 33
HC660_RS19740 3802234 .. 3802257 - -13.2  -4.78326   TTCTAAACAAATAAA          TCCCTCTGCA GATG CGCAGAGGGA           CCTCCTTATTTTGAA 100 31
HC660_RS19735 NONE
        msmX 3799904 .. 3799925 - -10.2  -5.09225   AGGGCATGCAAAAAA           CCGGACAT CTCTCC ATGTCCGG            TTCTCCAGCTTAACG  93 35
HC660_RS19725 3799068 .. 3799089 - -10.9  -5.15969   TTTCAAGTGAAAAAA           CCAGACATG TAGC CATGTCCGG            TGCAAATTAGGAAAA  93 32
HC660_RS19720 3797676 .. 3797698 -  -3.4  -5.26119   TCTGCAAAAACAAAA           CACCTACAGC TCT GATATAGATG           AAGATGAAGTTAAGG  77 484
        cydA NONE
        cydB NONE
        cydD NONE
        cydC 3788313 .. 3788331 -   -11  -5.63517   TTTTCAAACAAAAAA             GACAGCCC CAA AGGCTGTC             TTCTATTTTACAGGA 100 28
HC660_RS19680 3787390 .. 3787412 - -12.1  -4.71426   GGCTTATCAAGAAAA           GCTGTCTTC CCTAT GAAGACAGC           TTTTTTCATTCAAAT 100 31
        sigY NONE
HC660_RS19665 NONE
HC660_RS19660 NONE
HC660_RS19655 NONE
HC660_RS19650 NONE
HC660_RS19645 3782563 .. 3782573 -  -4.6  -2.78813   TTTTACCGGAAGAAT                 CGCC TAT GGCA                 CCATGCTGATTTGTT  48 366
HC660_RS19630 NONE
HC660_RS19625 3779059 .. 3779078 - -10.7  -5.65177   AGACCCATAAAAAAA            CAGCCGG AATTAG CCGGCTG             TTCGGGATGCGGACA 100 15
HC660_RS19620 3776903 .. 3776913 -    -4  -3.21276   CTGCTGTTGATAACA                 TCAT ATT ATGA                 AATCGCTTTCATATA  48 94
HC660_RS19615 NONE
        celB NONE
HC660_RS19605 NONE
HC660_RS19600 3773469 .. 3773485 - -15.1  -5.85425   CAAATAAACAAAAAA              CGGCCCG AAA CGGGCCG              TTTTTTTATGCTTCA 100 31
HC660_RS19560 3765680 .. 3765699 -  -7.8  -5.83226   AATGTAACAAAAAAA            GACCGCAT GAAA AAGCGGTC             TTCTTTCTTACCGGA 100 33
        ywaC 3764896 .. 3764941 - -15.8  -3.14134   ACATTTATGAAGATA TGAAATAAAAAAAGACGGCA CATCGC TGCCGTCTTTTTTTAATCCA CTTCTTTCTTAATCC 100 18
HC660_RS19535 NONE
HC660_RS19530 3759501 .. 3759523 - -10.7  -6.02919   TGACAAACAAAAAAA           CGCTTTTGA TGATC TCAAAAGCG           TTTTTTTCATATATA 100 43
        celB 3753228 .. 3753256 - -11.1  -4.01902   ACATTCATGAAAGAA        GATCATCAGCCTT TTA ACAGCTGATGATC        TATAACATTACATCA  86 38
HC660_RS19505 3752477 .. 3752511 - -13.1  -4.09685   TTTCAGCGGTGAAAA     TCAAAGAACGTACAT TTTTC ATGTACGTTCTTTGT     TTATCTATACCAACT 100 26
HC660_RS19495 3750753 .. 3750773 -  -9.7   -4.9725   ATTTCTACATAAAAA            GCTGCCC CTGAACC GGGCAGC            TTTTCTCTTTTTATT  93 36
HC660_RS19475 3749414 .. 3749444 - -13.6  -3.75897   AACCTCCAATTCAAA       TAACTAGAAAGAAT AAA ACTCTTTCTAGTTA       TTTGTGAAATTATAC 100 41
HC660_RS19470 3748417 .. 3748427 -    -4   -5.8187   TATTTAATAAAAAAA                 TACA CAC TGTA                 ATAAAACTTGTAGGT  89 194
HC660_RS19465 3746488 .. 3746516 - -11.9   -5.4833   TTATGTAAGAAAAAA        CACCATTTCTTAT TAA ATCAGAAATGGTG        TTTTATTATTAATTA 100 44
HC660_RS19450 NONE
        thiM NONE
HC660_RS19440 3742889 .. 3742910 - -12.3  -4.90906   GCAGAACAGCAAAAA           GGCTGCCCT TTAC AGGACAGCC            TCTTGAAAGCAAAAT 100 45
HC660_RS19435 NONE
HC660_RS19430 NONE
        efeB 3738886 .. 3738902 -    -8  -5.00616   CTGTTTTTTAAAAAA              GAAGCC TGCAT GGCTTC              TCTTTACGATTCAAG  86 29
HC660_RS19420 3738175 .. 3738206 - -10.3  -5.19212   ATCAGGATTAAAAAA      GGCTCTCTAAACA GATTTT TGTTTAGAGAGCT       TTCTTAGGTTACGTT 100 34
HC660_RS19400 NONE
HC660_RS19395 NONE
HC660_RS19390 NONE
        galT 3731459 .. 3731486 - -14.2  -3.67344   AGGATAGAAACAACA        GAGCCCAAAGCG TGAG CGTTTTGGGCTC         TTTTTTAATAGGAAA 100 52
        qoxA NONE
        qoxB NONE
        qoxC NONE
        qoxD 3726715 .. 3726735 - -11.2  -5.32699   TGAAACAGTAAAAAA            CCCTCTTC TGGAC GAAGAGGG            TTTTTTGCTTATTCG 100 34
HC660_RS19350 3724704 .. 3724727 -  -7.4  -5.60993   TGCTCTACAAAAAAA          GAGACAGCCC TTAA AGGCTGTCTG           CATTTTATGAATTAA  93 30
        nfsA 3723851 .. 3723870 - -13.6  -5.19879   CGTGAAACATAAAAA            CCTCTCCG CCAG CGGAGAGG             TTTCACATTTAGTTC 100 34
HC660_RS19340 3722645 .. 3722670 - -11.8  -3.39061   GTTGAATAAAAAGCA         GCCCTGCCGA GAAACA TCGGCGGGGC          TTTTTCCATACAGGC  85 51
HC660_RS19330 NONE
        sacT 3718482 .. 3718505 -    -6  -6.02919   CGATAAATAAAAAAA          CTTCCAGAGA TCAC TCCCTGCAAG           TCAAAGCGGTTATTC 100 35
        scrA NONE
HC660_RS19310 NONE
HC660_RS19305 3714224 .. 3714242 - -13.2  -5.36441   TTTTCACAGAAAAAA             CTGCCGAT CAC ATCGGCAG             CCTGTTTATTTGGTC 100 31
HC660_RS19295 NONE
HC660_RS19290 3712232 .. 3712255 -  -5.2  -5.14477   TACATACCTAAAAAA          TCAGGCAAGC TGGC GCCTGCCAAA           ATAACAGCCTATTCG  76 2
HC660_RS19285 3711623 .. 3711637 -  -4.2  -2.63596   TTGGACGGGAGATCA               GTGGGA ATA TCCTAC               CGAACTGTGAAATGG  47 44
HC660_RS19280 NONE
HC660_RS19275 3710043 .. 3710059 -  -9.4  -5.65927   TACTCAAATAAAAAA              GCGCAG GTCAT CTGCGC              TTTTTATAAATCCTT 100 29
HC660_RS19265 NONE
HC660_RS19260 NONE
HC660_RS19255 3706372 .. 3706399 - -12.2  -6.28967   GATAAAGAAAAAAAA        GCCAATC-CTCAT GAT ATGAGAGATTGGC        TTTTTTCTTTATAGA 100 34
        spsA NONE
HC660_RS19240 3703218 .. 3703230 -  -7.7  -3.02471   CTTGCAGGACATATA                CATGC CAG GCATG                CCGGCCTTCATTATG  64 79
HC660_RS19230 NONE
HC660_RS19225 3701755 .. 3701767 -  -3.3  -2.64805   GCAAATCATAATGGA                TGGGT GAT ACCCG                GTTCAGTCCTTTTCC  43 61
HC660_RS19220 NONE
        rfbB NONE
        rfbD NONE
HC660_RS19205 3698655 .. 3698678 -  -5.4  -4.00057   ACAGGACAAAAAAAG          TCGAAGAT GCCTAATG ATCTTCGA           TGGATAGCTGCTCTA  63 45
        bslB 3697864 .. 3697886 - -10.6  -5.53079   AAAACATACAAAAAA           GAGGCTGATA CCA CATCAGCCCC           TGATCATTTCTATTC 100 44
        rocG 3696411 .. 3696425 -  -7.2  -5.96894   ACGCAAACAAAAAAA               GCAAAA TGT TTTTGC               GGAAGAAGGGAGGTA 100 51
        pruA 3694630 .. 3694656 -  -7.4  -3.93061   ATCCCAAAATGTAAA         TAGTGCGATC TAAACAC AATCGCACTA         TTTCCGTTTTCTCAA  72 41
HC660_RS19185 NONE
HC660_RS19180 3691461 .. 3691482 - -15.9  -4.91712   CGTAACGCATAAAAA           GCTCTCCGG CCTC CCGGAGAGC            TTTTTCTATTGCGCT 100 31
HC660_RS19170 3688746 .. 3688759 -  -6.7   -5.4387   ATACAAACGAAAAAA               CCCTA AAAA TAGGG                TTTTATACATCGCTT  89 66
HC660_RS19165 NONE
HC660_RS19160 NONE
        bacC NONE
HC660_RS19150 NONE
        bacE NONE
HC660_RS19140 3682724 .. 3682741 - -11.3  -5.75478   AAGCATATAAAAAAA             TCCCGCT TTTT AGCGGGA              TACTTCTTGTAATGA 100 17
         pta 3679767 .. 3679789 - -14.2  -5.43866   GAAGGCGCAAAAAAA           GCAGCCCTCT GCG AGAGAGCTGC           TATCGCTTTTCTTAC 100 37
        cysL NONE
HC660_RS19115 3677843 .. 3677869 - -18.8  -5.98781   GATAACGAAAAAAAA         GCATGCCAGCCG TAT CGGCTGACATGC         AAGTGACGTTTATCC 100 35
HC660_RS19110 3676750 .. 3676775 - -12.7  -5.60993   TTTGCCATAAAAAAA         TCCCCTTTTCC TTTT GGAAAAGAGGA          TTTTCTGTTTTTGCG 100 88
HC660_RS19100 3675445 .. 3675465 -  -5.4  -5.27477   ATGTGAAGCAAAAAA           GCCT-GACC AGAG GGCCGAGGC            TATGAAAAAATATGT  81 42
HC660_RS19095 NONE
HC660_RS19090 3673447 .. 3673473 - -16.8   -5.7946   TTGTCAATAAAAAAA         GCAAAAGAAACG TTT CGTTTCTTTTGC         TTGGTATGGTTAACA 100 35
HC660_RS19085 NONE
HC660_RS19080 3671213 .. 3671242 - -13.7  -5.72616   ACTCATATAAAAAAA       CACATCCATCCCT CGCA AGGGACGAATGTG        TTAATATTCGTGGTT 100 287
        thrS NONE
HC660_RS19065 3668174 .. 3668194 -  -6.8  -3.88137   ATAATCTTTTATAAA            GCCGGC GCTTCGCAA GCCGGC            TTTTTCATCTCTATT  69 36
HC660_RS19055 NONE
HC660_RS19050 3666552 .. 3666590 - -10.4  -6.06723   TCTGCCAAAAAAAAA   TGAAAAACCCCGAGTC TTGGTTC GGCTCGGGATTTTCCA   TGTCCTATTTCTGTA 100 109
HC660_RS19045 3666071 .. 3666097 -  -9.5   -5.5604   GGAATCAATAAAAAA         TAACCCGGC TGCTTAAAT GCCGGGTTA         TTTAATATGGTTCTT 100 27
        speE 3662928 .. 3662948 -    -9  -5.00616   CTTTCCTGTAAAAAA            GCGCAAGA TTCGC TCCTGCGC            CATACATTCATTATT  91 36
        speB 3661997 .. 3662018 - -13.1  -5.46657   CACGGGAACAAAAAA           CATCCAGAC AAGA GTCTGGATG            TTTCTCTTATTTCAC 100 32
HC660_RS19015 NONE
HC660_RS19010 3657180 .. 3657228 -  -6.8  -3.91164   AATCTGTCAAAAACA TGACAGCAGCTTTTCAGAAACT CACAC AGTCTCATCAAAGCTGCTGTGA CTTTCAGCATCGCAA  68 468
HC660_RS18965 NONE
HC660_RS18960 3648280 .. 3648303 - -15.4   -5.7946   TCTGTAACAAAAAAA          GGACAAAGCC CTCT GGCTTTGTCC           TTTCAGCATGATTAC 100 37
HC660_RS18955 NONE
HC660_RS18950 3646138 .. 3646159 -  -8.8   -5.2015   CTAACAAGATAAAAA           CAAGGACA TATTGC TGTCCTTG            TTTCCACTTAATCAA 100 33
HC660_RS18940 3644784 .. 3644806 - -14.2  -5.17353   AGACTGATCAAAAAA           CCCGACTCCT TTT AGGAATCGGG           TTCAGCATTTTCATC 100 14
HC660_RS18935 NONE
        narH NONE
        narJ NONE
        narI 3638228 .. 3638248 - -11.1  -5.31877   ATTTATCATAAAAAA            TCCCCCTCT TTG AGGGGGGGA            TTTTTACAAACGTTT 100 29
HC660_RS18915 3637442 .. 3637468 - -14.4  -5.14563   CTTTCTATGAAAAAA         GCCTCTCCGCAC ACG GGGCGGAAAGGC         TTATGATGATGCTTC 100 26
         cls 3635797 .. 3635819 -  -2.8  -3.21912   CCCCCAATGCATCAA           TAACTGATAA GAT TTCTCAATTA           TACTATACACGGGCT  46 68
HC660_RS18905 3633645 .. 3633666 - -11.7  -5.38951   AACTTACATAAAAAA           GGATAGACA GTGA TGTCTATCC            TTTTCCTTATGCTCG 100 405
HC660_RS18885 NONE
        acdA 3627567 .. 3627579 -  -6.3   -3.0516   TATCAATAATGAAAG                CGATA TTG TATCG                TTCTTATACAAACCA  56 140
HC660_RS18875 3626849 .. 3626876 - -17.2  -4.67697   GGTGAAAATAAGAAA        GCTCCCTTTCAA TTTC TTGAAAGGGAGC         ATAACGTTCTATGTT 100 124
        pyrG 3625089 .. 3625118 -    -8  -5.85425   GAAACAAATAAAAAA       GACTTGTCCGCTT TTGAC AAACGG-CAAGTC       TTTTTTTATTACTTC 100 34
       spo0F NONE
HC660_RS18855 3622901 .. 3622923 - -13.4  -4.27861   AAGATAGACGGAAAA           CCGCCTGTCA AGC TGTCAGGCGG           CTATAAAAAGTTCCA 100 47
         fsa 3622146 .. 3622183 - -15.7  -3.11359   CGGTGAAAAGCAAAG   GCCGCGGCAAACAGA CACTACAC TCTGTTTGCCGCCGC    TTGAATTACTTGTTC 100 31
HC660_RS18845 NONE
        glpX 3619498 .. 3619513 - -10.4  -5.08255   ATTTGCAAAAGAAAA              GCGGGT CAAC ACCCGC               TTTTTCTCTTTGTTA  93 38
HC660_RS18835 3619111 .. 3619127 -  -2.3  -3.22943   AAGAGGAAATAGATA              CGTCTTT CAT AAAAACA              CCACGCTTTTCATAG  45 49
         rho NONE
        rpmE 3617479 .. 3617502 -   -14   -5.4251   TTGACATACAAAAAA          CAGGCAAGAA CTGC TTCTTGCCTG           TTGAAAAATCTATTA 100 41
HC660_RS18820 3616794 .. 3616813 -   -10  -5.48787   AGAATATATAAAAAA            CACCAGCT TTTC AGCCGGTG             CTTTCTATCTTTTTA 100 54
        malS 3614826 .. 3614840 -  -4.2  -3.02202   TAGCTTTATACAAAG               CTTTCC CTC GGACAG               AAAAATTACACGCTT  49 42
HC660_RS18810 3613794 .. 3613811 -  -9.1  -5.38497   ACGTAAAGTAAAAAA             GCTCCCC GTAA AGGGAGC              TTTTTTGATTACGCA 100 34
        prfA NONE
        prmC NONE
HC660_RS18785 3610270 .. 3610290 -  -8.3  -5.40072   TTTGCTGCAAAAAAA            GGAAGCC TCTTAAG GGCTTCC            TTTTTCATTAGATCA 100 33
      spoIIR 3609082 .. 3609093 -    -3  -3.69094   AATCTATGAGGCAAA                TCTA TTTT TAGA                 CCTGGTGATTAAGAA  49 34
HC660_RS18770 3608524 .. 3608556 - -12.1  -4.63218   TGTCCTGTAATAAAA      CAAGCGTTATCCACA AAT TGTGGACAACGCATA      TAAAGAAGTGGATAA 100 60
HC660_RS18765 3607375 .. 3607389 -  -2.8  -2.61004   GCATGTCCAAAAAGG               GTTAGA ACT TCTGAC               TGTGTCAGCGAATCA  41 30
HC660_RS18760 3606727 .. 3606745 -  -4.6   -5.5353   TATATGAAGAAAAAA             GAAACG GCGACAT CGTTTC             TTTTATTGGTATATT  84 39
HC660_RS18755 3606100 .. 3606114 -  -2.7  -3.06796   TCCCAGCGTATGTAA               TGCGG CCCGC CCGCT               TTGTTGACCGCGCAG  44 143
        rpiB NONE
HC660_RS18745 3605043 .. 3605069 -  -7.4  -4.13995   GCCGCACAAATGAAA         GAAAAGACTG GCCCATG CAGTCCTTTC         TCATTCACACTCATA  73 26
        glyA 3603579 .. 3603603 -   -15  -5.04987   AACATCGTCAAAAAA         CCCGC-CGGGC ATAA GCCCGAGCGGG          TTTTTCAATCTTAGT 100 36
         upp 3602824 .. 3602845 - -13.1  -5.88565   TGGATAATAAAAAAA           GAAAACCCG TTGG CGGGTTTTC            TTTTTTATTTTGTTC 100 30
HC660_RS18730 NONE
        atpB NONE
        atpE 3600986 .. 3601017 -    -3  -3.67481   TCAGACATAAAGCAA      TGGCGAAGGTTCTCT TGG AATGATC-TTCGCCA      TTTTTAGTTCATATA  49 53
        atpF NONE
HC660_RS18710 NONE
        atpA 3598263 .. 3598289 - -13.2  -4.57569   TCATTTGCGTAAAAA         GAGAGAAAAAGA GAA CCTTTTTCTCTC         ATCAGCATTCGAGTT 100 39
HC660_RS18700 3597376 .. 3597388 -  -6.2  -3.59979   TCTTTCTATTCTAAA                GCGG CTGCT CCGC                CGACAATTTCCGTAA  62 3
        atpD NONE
HC660_RS18690 3595470 .. 3595490 -  -9.8  -6.24157   AGTCATAAAAAAAAA            TCCTTCTC ATGAA GAGAAGGA            TTTTTTTTATTTCCC 100 32
HC660_RS18680 NONE
HC660_RS18675 NONE
        murA 3592318 .. 3592342 - -10.1  -5.95286   ACTAAAAATAAAAAA          CCAGTATGCCA GAA TGACATACTGA          TTTTTAATCCTTTAT 100 37
      spoIID 3591108 .. 3591125 -  -9.9   -5.1361   ATAAACGGCAAAAAA             GACGCTT TATG AAGCGTC              CTTTTATTTCTTCGC  93 29
HC660_RS18660 3589993 .. 3590008 -    -9   -6.4275   TAAAAACAAAAAAAA              GGCTGA CCTT TCAGCC               TCTTCTTTTTTCTTA 100 38
HC660_RS18655 3588994 .. 3589010 - -10.8  -5.16206   AAACCAATAGAAAAA              GGCGCC TGGGG GGCGCC              TTTTCATTGGGTTAA  93 37
HC660_RS18650 3588752 .. 3588771 -  -4.2  -5.93809   CTGTTATAAAAAAAA            GAGCCCAT TCTA AAGGACTC             TACGTTTGGTTATGC  93 25
        fdhD NONE
        moaA 3586809 .. 3586832 -  -8.9  -5.71712   TTTGACACAAAAAAA          GCTTACCGG ACTTAG CCGATAAGC           TTTTATCATATTAAC 100 36
HC660_RS18635 3585485 .. 3585502 -  -9.9  -6.02914   TGTATATAAAAAAAA             CCATCTG GCGT CAGATGG              TTTTTACACTTGATA 100 29
HC660_RS18630 NONE
HC660_RS18625 3584549 .. 3584571 -   -15  -6.30182   TCACATAAAAAAAAA           GGCAAGAAAC ATT GTTTCTTGCC           TTGCCGCTCTGATTA 100 38
        urtA NONE
        urtB NONE
        urtC NONE
        urtD NONE
        urtE NONE
        ureA NONE
        ureB NONE
        ureC 3577165 .. 3577185 -   -14  -4.67982   GTTTAGTCAATAAAA            CGGCCGGA TGCAC TCCGGCCG            TGTCTTGTCAGAATA 100 33
HC660_RS18580 3576645 .. 3576670 - -12.1  -2.57132   GTTGGCGGTGAGAAG         TCATCTCTTTT GATC AAAAGAGATGA          TTCATTACATCTTTT  85 13
HC660_RS18575 3575920 .. 3575937 - -12.7  -5.30155   CTATTAAGTAAAAAA             CCCGGAG CTTC CTCCGGG              TTTTTTCTTGTTATT 100 36
HC660_RS18560 3573139 .. 3573183 - -18.8  -5.40004   GATGAAATGAAAAAA CGGCACCCTGATTGTTAG ATAAATCCG CTAACAGTCAGGGTGCCG TTTACAGTATTAATA 100 35
      spoIIQ 3563667 .. 3563713 -    -9  -5.31519   ACAGTGAAACAAAAA GTAACAAAAAAAACGCCTATCA CAC CGATAGACGTTTTCTTCATTAA GACTGTTCAGTGTCT 100 22
HC660_RS18505 3563144 .. 3563179 - -12.8  -3.09518   TCAAAATTTCTAAGA    TAAAGCCGGC-CTCT GAATGGA AGAGCGCCGGCTTTA    ATATTTTTCATACAT  91 23
HC660_RS18485 NONE
HC660_RS18480 NONE
HC660_RS18475 3557904 .. 3557937 - -13.4  -3.94634   GAGCATCCTAAACAA     GAAAAGAGACAGAC TCGTAT ATCTGTCTCTTTTC      TCATGAACTTGTTTT 100 26
        pucI 3556234 .. 3556255 -  -7.3  -2.82516   TCTTCTACCATTATA           GGTTATCCA TTTA TGGAAAACC            ATCTCAAATCCATTC  60 56
HC660_RS18465 3554737 .. 3554771 -   -18  -5.24129   TTTTTGCATAAAAAA     CGGCATTCTGCTCCGT TTA ACGGAATAGAATGCCG     CTTGTTCATGATTCA 100 31
HC660_RS18450 NONE
     spoIIID 3552272 .. 3552282 -  -5.4  -3.04517   ATCCTCCTTGAAAAT                 CTGT TTC ACAG                 TAAATATCCACATTG  53 171
         mbl 3551215 .. 3551237 -  -8.5  -5.60993   GTTTTCATAAAAAAA           CCCCATTCT TTTTC AGAATGAGG           TTTGAGTGATCAGCT 100 35
HC660_RS18435 NONE
HC660_RS18430 3549233 .. 3549243 -  -3.2  -5.01042   AATTGAAATTAAAAA                 CACT TGA AGCG                 CTCTATACGTCTGCT  72 215
        fabZ 3547692 .. 3547717 -  -8.3  -5.95539   TTTGAAAGAAAAAAA         GACAAATGTGC CGCT GCCCATCTGTC          TTTTTTTCACTTACT 100 36
        mscL 3547233 .. 3547256 - -13.9  -5.28176   TTGACCTATAAAAAA          GACTGCCGC ATTCCA GCGGCAGTC           TTTTTTTATTCTGGA 100 31
HC660_RS18405 3542794 .. 3542828 -  -8.6  -5.96219   CATGTACAAAAAAAA     CCAGTGTGCATCGA AAGGCAA TCGACACTCACTGG     TTTGGGTAAGTTTTC 100 48
HC660_RS18400 3536495 .. 3536525 - -11.3  -5.00884   ATCTGTTTTAAAAAA       GCACCTGATCA AATCTTCAA TGATCAGGTGC       CATCACATTTAAGCC  93 34
HC660_RS18395 3535705 .. 3535729 - -12.9  -4.35483   CTGTATTAGAATAAA          GCCTGCCTTTT ATC ACAAGGCAGGC          TTTTTCATTCTCCTA 100 76
HC660_RS18380 NONE
         ssb 3533367 .. 3533383 -    -8   -5.7827   AACAGAAAGAAAAAA              CCAGTC TGGTC GACTGG              TCAATTCAGAGGGGG 100 97
HC660_RS18370 NONE
HC660_RS18365 3531477 .. 3531499 - -14.2   -5.4111   AATAACCACAAAAAA           GCTGGCTCCT AAA AAGAGCCAGC           TTTTTTCCGTTCATA 100 115
HC660_RS18350 3526724 .. 3526744 -  -5.3  -5.75599   TAAATCAGAAAAAAA            CCCCGCCAA AAA CCAGCGGGA            TTTTTATGTTGCATA  95 29
HC660_RS18345 NONE
HC660_RS18340 3525051 .. 3525079 - -11.9  -4.56597   CTTTTTTCGCAAAAA        TAAATAACGGGCA GCA TGCACGTTATTTA        TCTTTGTATGAAATT 100 23
HC660_RS18335 3524191 .. 3524205 -  -5.8  -3.57119   TACAGATTTCTGAAA               TATGAT TCA ATCATA               CAATATACTATTATA  62 80
HC660_RS18330 3522724 .. 3522742 -  -8.8  -5.25803   AATGGGTACAAAAAA             GACCGGCA TCC CGCCAGTC             TTTCCTTTACATCTA 100 38
HC660_RS18320 NONE
HC660_RS18315 NONE
HC660_RS18310 NONE
HC660_RS18305 3518650 .. 3518672 -  -8.5  -5.64274   CTATCTATAAAAAAA          CTTGCCGATG ACAA CA-CGGCAAG           TTTCTAACTATAGCA 100 33
HC660_RS18300 3517925 .. 3517942 -  -4.1  -5.14965   AGCCTCATTAAAAAA             GCAGG GAGTACAA CCTGC              TTCTTTATTAGTATT  73 33
HC660_RS18295 3517012 .. 3517028 - -12.3  -4.99035   TCATTTATAGAAAAA              GCACCCT CAA AGGGTGC              TTTTTATTTTGGGCC 100 450
         ggt 3513165 .. 3513190 -  -8.2  -2.88667   CCTTATAAAAATGCA         GCACCCGGAG TAATCC CCCCGGGTGT          TTTTCTATGAAACAT  66 434
HC660_RS18235 3505863 .. 3505875 -  -3.5  -4.05389   TACATAGATGATAAA                TATAT TGC ATATA                TACGTGTCACAGTTA  57 103
HC660_RS18230 3504462 .. 3504484 -  -3.4  -4.90013   TAATTGAATGAAAAA           GGGCATCA CTTTATC TGATGCAC           CTTCATTATCTATTA  69 38
HC660_RS18225 3503713 .. 3503736 -  -3.8  -5.68438   TGATGAAACAAAAAA          CTGCCTTC TGCTATTC GAGGGCAG           TTTATTTTCAGTATA  89 48
        alsS NONE
        budA 3498509 .. 3498535 - -11.7  -4.55128   AGTGCCAAATGAAAA        GAAAGCCCTGCA CATG TGC-GGGCTTTC         TTTTTTTATTCCGGG 100 31
HC660_RS18200 3497883 .. 3497906 - -13.9   -4.2074   TTTTTAATAGAGAAA          GCCCTGTCC CACACC GGACAGGGC           TTTTCTTTTTAAGAA 100 34
        pgsB NONE
        pgsC NONE
        pgsA NONE
HC660_RS18140 3487280 .. 3487333 - -18.7  -3.53012   TGCTGGCTTTCGAAA TGGCAAATAAAAAAAGAGAATGTCT CGAA AGACATTCTCTTTTTTTATTTGTTA TTTAGCGGCGTTTGC 100 23
HC660_RS18135 3485895 .. 3485940 - -18.8  -3.01712   TCTTTCCGGCCAATA TGC-ATAAAAAAAGACTCCAG TTTCT CTGGAGTCTTTTTTTATTGCA CCCGAATACCTCCCG 100 18
HC660_RS18120 3482159 .. 3482181 - -11.3  -4.81083   GGTAAGCAGCAAAAA          GGGTGC-GCC AATT GGCAGCACCC           TTTTGAATATGATTT  91 39
        manA 3477224 .. 3477246 - -12.2   -6.4275   GAAAAATAAAAAAAA           CTTAATCTCA AAG TGAGATTAAG           TTTACATGTGTGACA 100 27
HC660_RS18095 3474440 .. 3474463 -   -14  -5.02439   AGATAATGATAAAAA          CACCTTTTGC CGCG GCAAAAGGTG           TTTTTTTATTTATAG 100 35
        tagD 3466579 .. 3466599 -  -2.6  -6.01369   TAAACAAGAAAAAAA            GAAGCAAC TGAAC ATTACTTC            AAGCCTCTTTTAATT 100 48
HC660_RS18055 NONE
HC660_RS18050 NONE
HC660_RS18045 NONE
HC660_RS18040 NONE
HC660_RS18035 3458557 .. 3458577 -  -5.4  -3.59301   AATGTATAGAAAAAG            CCGACAGA TATAC TCCATCGG            TCTTTTTCATAGTTC  59 44
        tagG NONE
        tagH 3455957 .. 3455982 - -12.7  -5.56264   TCTAAACATAAAAAA         GGCTATTGGAC ATTC ATCCAATAGCC          TTTTATTATTTCAAC 100 31
HC660_RS18015 NONE
HC660_RS18010 3451743 .. 3451757 -    -5  -4.07885   TATTTCTTCTCAAAA               GCTCAT ATA ATGAAC               AAAAATGGCACAGAA  63 46
HC660_RS18005 NONE
        wecB 3448590 .. 3448628 - -14.1  -4.39571   CTTAGAAAGCTAAAA   TAAAAGAAGCTTCGCAC CCTAT GTGCAAAGCTTCTTTTT   TATTTACCCGTAAAA 100 25
HC660_RS17990 NONE
HC660_RS17985 3444915 .. 3444932 -  -9.1  -3.51858   CAAATAACGAACGAA             GGAGGCA GAAG CGCCTCC              CTAAACTTCTATCAA  74 45
HC660_RS17980 3443314 .. 3443349 -  -7.6  -5.26316   TTATCGTATAAAAAA    GCTTGCCTGCAACTCCT GAT AGGT-TTGCCGACAAGC    CGTGTCCAAGTAAAT 100 51
HC660_RS17975 3441212 .. 3441241 - -10.1  -5.64274   TTATGTATAAAAAAA       GAGACAAACCGTT GTTC ATCGATTTGTCTC        TTCAATGGAAGCATT 100 41
HC660_RS17970 NONE
HC660_RS17965 NONE
HC660_RS17960 3437707 .. 3437721 -  -2.8  -3.48292   ACTTACGATTAAACA               GGTGTT TTC AAAACC               ATCTGATACTGATCG  47 4
        tuaD NONE
HC660_RS17950 NONE
HC660_RS17945 NONE
HC660_RS17940 NONE
HC660_RS17935 3431961 .. 3432004 -  -2.6  -3.46874   AAGAAACACGTATAA TCAAAAA-ACGCGCATCCC AATTAAA GGACTACGCATGTTTTTGA ATCCCTGTATATTTC  47 10
HC660_RS17930 3430748 .. 3430768 - -13.3  -5.24129   TTTGCGCAGAAAAAA            CTCCGGCTC ATA GAACCGGAG            TTTTTAATTTCTTTT 100 29
        degS NONE
        degU 3426698 .. 3426720 - -10.6  -5.48303   AGAAGCCTAAAAAAA           GACCTGCCTC AAA AAGGCAAGTC           CAGTTTCATGCTATC 100 36
HC660_RS17905 3425759 .. 3425779 -  -5.4  -5.57054   AAGAATTTAAAAAAA            TCCCCGCT ACTAA AACGGAGA            TTTCATCATTTATTT  86 35
HC660_RS17900 NONE
HC660_RS17895 NONE
HC660_RS17890 NONE
HC660_RS17885 NONE
        flgM NONE
HC660_RS17875 NONE
        flgK NONE
        flgL 3419445 .. 3419463 -  -3.1  -5.75599   TAAACTATAAAAAAA            GCGAACTC CTGA GAGC-CGC             TTACTTTAAAAAGTC  88 26
HC660_RS17860 3418816 .. 3418832 -    -3  -2.53164   GTATTTAGTATGAAT              GATCAT TGTTC ACGATC              CTTTTCTTTTTACTT  41 35
        fliW NONE
        csrA 3418169 .. 3418189 -  -6.9   -6.4275   CAAAAATAAAAAAAA            TCCTCAC TTTTTTT GTGAGGA            TAATGCGGAGATCAC 100 8
         hag 3417140 .. 3417161 - -10.1  -5.82172   AGGAATATAAAAAAA           GACCCCGGC AAAC GCCAAGGTC            TTTTTCAAAATTAAC 100 36
        flaG NONE
HC660_RS17835 3415094 .. 3415106 -    -2  -2.73124   TGTCATCCTCCAAAT                TACA TTTAT TGTA                CAAGAAGCTGTGATA  41 18
        fliS NONE
HC660_RS17825 NONE
HC660_RS17820 NONE
        raiA 3413157 .. 3413179 - -16.4  -5.84011   AAGAAAAAACAAAAA           CCTTCCGTGA AAA TCACGGAAGG           CTGCTCTTCATTATT 100 36
        secA 3410447 .. 3410475 -  -8.9  -4.26903   TTCACCTCATTAAAA       GATCCGCGGGCGC TCGAG GCGC-CGCGG-TC       AGCAAGCTTGCCCGA  83 46
        prfB 3409295 .. 3409317 -  -9.2   -5.8187   CAGGCAATAAAAAAA           CACACCTG CAGACAC CAGGTGTG           TTTCCCGCTTATGAA 100 34
HC660_RS17800 NONE
HC660_RS17795 3407888 .. 3407911 -  -4.6  -5.67063   TTCAGCATAAAAAAA          TCCTTGCC-CA AGT CGCGGCAAAGA          TTTTCTGATATTACT  84 36
        ftsE NONE
        ftsX 3406090 .. 3406111 - -11.5  -5.49568   AAGGCAAAAGAAAAA           GCCGTCCCG CAAC CGGGATGGC            TTTTTTGTGTTTATA 100 36
HC660_RS17780 3404518 .. 3404537 - -12.2  -3.91213   AAGCATAAAGAAACA            GGAGATGG AACA CCATCTCC             TTTAATTGACAAATA  95 27
        swrA NONE
HC660_RS17770 3402485 .. 3402530 - -17.7  -4.15854   AAATTCAGCGTAAAA CAAAACAGCCCGGCGCCACAC AAAA ATGTGATGCCGGGCTGTTTTT TATGATCCAGGCAAA 100 25
HC660_RS17750 3397112 .. 3397136 - -11.6  -5.28176   TTCATGTATAAAAAA          CCTGCTTTTA AAACG TAAAAGCAGG          AATTCATCTTCTTAT 100 55
        uvrB NONE
        uvrA 3392099 .. 3392114 -    -9  -4.32951   AAAGAACAGCGAAAA              CCCTCT GAAA AGAGGG               TTTTAAGATGTTGCT  83 28
HC660_RS17730 NONE
HC660_RS17725 NONE
HC660_RS17720 NONE
HC660_RS17715 3389594 .. 3389613 - -12.2  -5.09225   ATCCTATGTAAAAAA            GCTGCCAT TTGG ATGGCAGC             TTTTATTTCTTACGA 100 28
HC660_RS17700 NONE
HC660_RS17695 3385416 .. 3385441 - -10.3  -4.75356   AAACATATGTAAAAA         GGCCCCGCCCG CATT CGGGAGAGACC          TGTCACTCTTATTGG  91 34
HC660_RS17685 3380884 .. 3380913 - -13.7  -5.24129   GGCTGTCATAAAAAA       GTCTCCAACCCCT TTTT AAGGATTGGAGAC        ACGGCGAAAATCAAA 100 11
HC660_RS17665 NONE
HC660_RS17660 NONE
HC660_RS17655 NONE
        ppaX NONE
        hprF 3374137 .. 3374161 - -12.8   -5.4659   TAATATAAAGAAAAA          GCCCGCGGTT ATTTG ATCCGCGGGC          TTTTTATTCTATCCT 100 9
HC660_RS17630 NONE
HC660_RS17625 NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
HC660_RS17595 3365767 .. 3365786 -  -6.4  -5.55769   TCTTATAACAAAAAA            GAGCCTTT ATCC ATAGGCTC             TTTCCATTTACTATT  90 36
HC660_RS17590 NONE
HC660_RS17585 NONE
HC660_RS17580 3362503 .. 3362529 -  -8.1  -5.54338   CAATGAAAATAAAAA         TCCCCTATTCA TGACT CGAATAGGAGA         CGTTTCATATTATAG 100 35
HC660_RS17575 3360543 .. 3360565 -  -8.5   -4.1964   CTCAATAGTTCAAAA           GGAAGGATT GGGAA AATCCCTCC           TCTTTTTTTTACTGG  79 57
HC660_RS17570 3358980 .. 3359002 - -13.6   -5.9218   TATAGAATAAAAAAA           GAGTTGATTC TGC GAATCAACTC           TCCATAAATATACTA 100 38
        cwlO 3357185 .. 3357208 -  -8.9  -4.88795   ATTTAATAAAAGAAA          GAGCCTTCT GTCCAT AGAAGGCCC           TTGTCTTATTTATTA  91 38
        trxB 3355898 .. 3355925 -  -3.5  -5.60993   TTTTGGACAAAAAAA        GGACACGGAT AACTGGAGA ATCCGTG-CC        AAAAGTGTATTCATT  81 152
HC660_RS17555 NONE
        rapZ NONE
        mgfK NONE
        whiA NONE
HC660_RS17535 NONE
HC660_RS17530 3351340 .. 3351360 - -11.2  -5.18726   TGTTCATAAGAAAAA            GCTTGCAG TATGT CTGCAAGC            TTTTCACATTACAAA 100 34
HC660_RS17520 NONE
HC660_RS17515 3349149 .. 3349166 -  -3.3  -4.91109   TCTTTATTATAAAAA             GGAAGTC AGCA GCCTCCC              ATCGAACTTTCTTTC  69 58
        psdA NONE
HC660_RS17505 3346392 .. 3346412 - -11.2  -5.37593   CGGTAAATTAAAAAA            TCCGGTCT GATGA AGACCGGA            TTTCATATTACATAT 100 33
HC660_RS17495 NONE
HC660_RS17490 3342765 .. 3342780 - -11.8  -5.96219   CATGCATAAAAAAAA              CGGCCG CAGT CGGCCG               TTTTTTTTCACCCTG 100 33
HC660_RS17480 3341694 .. 3341715 -  -9.5  -5.48163   AAAGAAACTAAAAAA           GAGATTTCC TACA GGAAACCTC            ACATTGTAATAATCA 100 55
HC660_RS17460 3339896 .. 3339925 -  -2.2   -5.5208   GTACAACACAAAAAA      GACAAGAG--CGGC AATC GCCAAACCCTTGTC       TTTCCTGTTGTTCTA  79 46
HC660_RS17455 3339237 .. 3339272 - -19.4  -2.71731   CTTACGTCTTAATCA    TAAAAGGCATATACAG ATAG CTGTATATGCCTTTTA     TCTTTTACTCATCAT 100 30
HC660_RS17420 3332195 .. 3332208 -  -5.3  -3.35798   ACCTCCTACTTACAA               GAAAC TTGA GTTTC                TTTTTTCTGAATAGA  56 2
HC660_RS17415 NONE
        arsC NONE
HC660_RS17405 NONE
HC660_RS17400 3329485 .. 3329497 -  -3.4  -3.23611   AAAAAAGCTGATCAA                TCCT CAAAC AGGA                AAAATCAACTTTAGA  48 65
HC660_RS17395 NONE
HC660_RS17390 3327317 .. 3327342 -  -5.5  -5.86465   AAGAACACAAAAAAA         CAAGAGCCG-AT TAC ATACAGCCCTTG         TTGAATAGTTCATTT 100 10
HC660_RS17385 NONE
        padC 3326206 .. 3326249 - -16.3  -4.76041   CATACTCAGCAAAAA GAAAACCCGGTAAAGAGAA GTCATT CTCTCTTTACCGGGTTTTT GTTTTCTTACAATTT 100 32
HC660_RS17360 NONE
        epsB 3322309 .. 3322328 -   -10  -3.10894   ACGACCAGCATCTAA            GGCAGCCT GTTC AAGCTGCC             CACAGCGGAGCCGAG  76 86
HC660_RS17350 3320342 .. 3320356 -  -5.6  -3.33815   ACTCCCCCTAACGAA               TGCCGG CAG CCGTCA               TTTCGTTTGATGTGT  56 3
HC660_RS17345 NONE
        epsE NONE
HC660_RS17335 NONE
        epsG NONE
HC660_RS17325 NONE
HC660_RS17320 NONE
HC660_RS17315 NONE
HC660_RS17310 NONE
HC660_RS17305 NONE
HC660_RS17300 NONE
HC660_RS17295 NONE
HC660_RS17290 3308039 .. 3308065 - -11.7  -4.80487   GAGAATCAAAATAAA        CCTTCC-GCTCA CATA TGAGCAGGAAGG         TTTTCCTTCTTTAAG 100 7
        rpoN 3306410 .. 3306427 -    -7  -5.41143   GATTCCGTAAAAAAA             TCCTCC TTACAG GGAGGA              TTTTATTTGTACCGT  91 28
HC660_RS17270 3303697 .. 3303719 -    -7  -4.18676   GCACAAAGTAAATAA           GACTGAACCA TTG CAGCTCAGTC           TTGGTTGTTTGTATG  73 72
HC660_RS17265 3302567 .. 3302586 -  -7.2   -5.4833   TTACCTAATAAAAAA            TGACTTAG ACTC CTAAGCCA             TTTTGAAATATGATT  91 40
HC660_RS17260 NONE
HC660_RS17255 NONE
        ganQ NONE
HC660_RS17245 3296923 .. 3296947 -  -7.7  -5.05782   AGCGATTTCAAAAAA          GACCCCGCCCA TAT CGAGCGGAGGC          ACACCTAATGTGAGT  89 30
HC660_RS17240 3295550 .. 3295587 - -11.5   -4.6313   TGTAAAATAAAAGAA   TCCATGAGAGATAACAA TGCA TTGTTACGCCTCATGGA    TTTTCATTTTTTCAG 100 37
HC660_RS17225 NONE
HC660_RS17220 NONE
HC660_RS17215 3290402 .. 3290416 -    -5  -4.15044   GTCCTCGGCAATAAA               TAGACG AAT CATCTA               TTTCGTCCTCCTCCT  63 42
        yvfU 3289776 .. 3289807 -  -7.4  -5.30616   CCATGTAAATAAAAA      GGAACCTGGT TCTGTACGATTC ACCAGGTTCC       TCATTAAATCCATCC  91 29
HC660_RS17205 3289528 .. 3289549 -  -5.1  -5.84381   TCAGCAATAAAAAAA           CGC-CTGTAC ATA GGACAGCGCG           TTTAAAAAAGCGATA 100 117
HC660_RS17200 NONE
        lutB NONE
HC660_RS17190 3286457 .. 3286485 - -16.1  -2.71263   AAGTTTTTTCAAGCA        GAAAGCCCGGC ATAGGTA GCCGGGCTTTC        TGGATCAGCGGTCAG 100 30
HC660_RS17185 3284985 .. 3285029 -   -16  -5.93252   TTCAAAAACAAAAAA GCCCGCCGTCTCC-TATCTAT ACGA ATAGATAAAGAGACGACGAGC CTTCGGCTGACCGCG 100 346
HC660_RS17180 3283568 .. 3283593 - -13.4  -4.95547   TTCACAATAATAAAA         CCCTCTTGTC GGATGT GACAAGAGGG          TTTCTTATTTACTGG 100 34
HC660_RS17170 3281548 .. 3281560 -  -4.8  -4.04174   TGTGATATAAGTAAA                CAGC CTCAT GCTG                TTACGTCTCTATCGA  63 139
HC660_RS17165 3280462 .. 3280490 -  -6.8   -5.5604   TGAATGAATAAAAAA       GCAATGT-ATGGG TTTC CCCTTTACATTGC        TTTTTTATGGCCTTT  90 39
        araE 3277731 .. 3277751 -  -6.2  -5.54907   CGCACAAAATAAAAA           GCCCTTCTC AATC GA-AAGGGC            TTCACTTTTTAAAGC  89 45
        cggR NONE
         gap 3275306 .. 3275330 - -12.2  -4.65895   GTCTTCATGGAAAAA          GGGAAAGGGA GTCCG TCCCCTTCCC          TTGTCCGCTTTCATT 100 92
HC660_RS17135 NONE
HC660_RS17130 NONE
        gpmI NONE
         eno 3270229 .. 3270250 - -15.9   -5.5943   AAAGCACCAAAAAAA           CCGCCGAGA TTTC TCTCGGCGG            TCATTTTATTACTTG 100 34
HC660_RS17110 3267770 .. 3267793 - -16.8  -4.61482   TCTTTTAAAAAACAA          CCCCATCACC TGCT GGTGATGGGG           GTTTGTTTTTATTGA 100 34
HC660_RS17090 NONE
       opuCB 3263402 .. 3263419 -  -4.1  -3.90922   AGTCCCGGCAAAGAA             CA-GCCGC TCA GCAGCATG             ACAAAGGCGAAAGCG  57 89
HC660_RS17080 NONE
       opuCD 3261837 .. 3261857 -  -9.7  -4.70879   CCGAAACCGTAAAAA            CGCCCTGTC ATG AACAAGGCG            TTTTTTTACTAAGCT  91 34
HC660_RS17065 NONE
       opuBB NONE
HC660_RS17055 NONE
HC660_RS17050 3257541 .. 3257569 -    -9  -5.70829   AATACCATAAAAAAA        GGACTCTTTTCC CTCTC AGAAAAGAATCC        TTTTTGCTTAACTCT 100 39
HC660_RS17045 NONE
HC660_RS17040 NONE
HC660_RS17035 NONE
HC660_RS17030 3250518 .. 3250534 -  -4.4  -5.95539   TGCCAAATAAAAAAA              GTGCGA TCAGG TCACAC              TCCTACTCTAGGTGA  93 387
HC660_RS17025 NONE
HC660_RS17020 NONE
HC660_RS17015 NONE
HC660_RS17010 NONE
HC660_RS17005 NONE
HC660_RS17000 3245483 .. 3245505 - -14.9  -4.42748   CCATTCTAAAAATAA           CCCACGTCC AGATA GGACGTGGG           CTTTATTCGTTTCTT 100 28
HC660_RS16980 3243326 .. 3243337 -  -2.2  -4.81551   CAGCCATACGAAAAA                CAGA CAGC TCCG                 AAATCTATTAACGAG  66 354
        secG 3242439 .. 3242459 -  -5.4  -4.72486   CAGAAACGTGAAAAA            GGCCTGAC TTTAC ATCAGACC            TTATACAAACATTGC  74 42
HC660_RS16965 NONE
         rnr 3239211 .. 3239238 - -10.7  -4.41348   TGTTTCCGAAAGAAA        GCAAATAGAGC ACTGCG GCCCTATTTGC         TGGTTGAGCTGCTAT  89 37
        smpB NONE
        ssrA 3238062 .. 3238084 - -12.1  -5.90981   TTATACGAAAAAAAA           GCAGAACCT GTAAA AGGTTCTGC           TTTTTTTTGCATTAT 100 41
HC660_RS16945 3237103 .. 3237122 -  -8.6  -5.94214   AATATAATAAAAAAA            CCTCATCCC AGA GGGA-GAGG            TTTTCTAAAAGACGC 100 30
HC660_RS16940 NONE
HC660_RS16935 NONE
HC660_RS16930 3235693 .. 3235711 - -10.3  -5.26119   TTTCGAAAAATAAAA             GCAGTGC TACTC GCACTGC             TTAGATAAAAGTCTG 100 13
HC660_RS16925 NONE
HC660_RS16920 3233974 .. 3233996 -  -5.6  -5.14563   GCTCTCATCAAAAAA           GACAGAGA CCCATCT TCTCTGCC           TTCATTACACAAGTT  78 30
HC660_RS16915 3231960 .. 3231980 -  -6.2  -3.17714   TCAAATCCGTACGAA            CAGCTTAC TTTTC ATAAGCTG            TTCGCAAACCTGTAT  57 9
HC660_RS16910 3231146 .. 3231167 -  -8.7  -4.79953   AGAACAATAAATAAA           GCCTCCC TTTATACG GGGAGGC            TTTTTTCATTAGAAT  88 34
        csoR 3229601 .. 3229611 -  -4.6  -2.79796   TTTCATCCTACCATA                 CCCC CGT AGGG                 TATTACAATGATGAA  48 48
        copZ 3229315 .. 3229340 - -14.9  -4.71307   TAAAAATGAAAGAAA         TATCGCACCTT CATC AAGGTGCGATA          CCGTGAATCAGTTGG 100 33
HC660_RS16890 3226835 .. 3226849 -  -5.6  -5.67529   AATGAAAAATAAAAA               CCGGCA AAA CACCGG               TTTTTATTTTACTTT  95 29
        cadA 3224486 .. 3224511 -  -7.6  -5.46698   TTTAAAATTAAAAAA         GAAGCGGATC TCCATT GACCCACTTC          TTTATTTTAACAAGA 100 87
HC660_RS16880 NONE
HC660_RS16875 3223337 .. 3223357 - -10.4  -5.68023   GTACAAGTAAAAAAA           GCGCCCTGC ATTC GC-GGGCGC            TTTTTTCTTATTCAG 100 33
HC660_RS16870 3222511 .. 3222537 -   -16   -4.3739   CAGGCTGCCATAAAA         GAAACCTCTCCA TGA CGGAGAGGTTTC         TTTTATTTTACTGAC 100 33
HC660_RS16860 3219080 .. 3219097 -  -9.9   -5.9003   AAATGAAGAAAAAAA             GAGAAGG GATC CCTTCTC              TTTCAATCAGCAATC 100 28
HC660_RS16855 3217124 .. 3217134 -  -3.2  -2.72012   AATCAGTATACATCA                 CGCT GAT AACG                 TTTTTGCTGCTGCAT  43 2
        cysI 3215330 .. 3215354 - -11.5  -5.13016   AAGCAAAATGAAAAA          GAGACAGGG CAATCCT CCCTGTCTC          TCGTATCTATAATCA 100 38
HC660_RS16845 3213062 .. 3213080 - -13.2  -5.38951   AACCTATAGAAAAAA             GCTGGCAT CCG ATGCCAGC             TTTTTTTCTTGAAGT 100 40
        pgoN 3211459 .. 3211480 - -11.6  -5.28755   AAACACATGAAAAAA           CTCCCCGT ACTTAG ACGGGGAG            TTTTTGATTAAAACA 100 33
HC660_RS16820 3208949 .. 3208963 -   -10   -5.7946   TGGTCAATAAAAAAA               TCCCTC TTA GAGGGA               TTTTTTTTCATGTTT 100 33
        sspJ 3206164 .. 3206190 - -17.4  -4.28375   GGAACAGATGGAAAA         TGCGGATAGAGC CAA GCCCTATCCGCA         TGCGGTTAGCGATTA 100 31
HC660_RS16800 3204356 .. 3204381 - -13.4  -5.49569   GAGTAATATAAAAAA         GACACCTGAC TGCATT GTCAGGTGTC          TTTTTTTATGCTTGT 100 31
HC660_RS16790 NONE
HC660_RS16785 NONE
HC660_RS16780 3200133 .. 3200151 -  -8.1  -5.79595   GTTGAAAATAAAAAA             TCCCGGC GTTAT ACCGGGA             TTTTTCTTACACAGA 100 32
HC660_RS16775 NONE
HC660_RS16770 NONE
HC660_RS16765 3196872 .. 3196896 -  -9.4  -5.47218   GCCCAGCTAAAAAAA         GAACGCCATCC GATT GGATG-CGTTC          TTTTTATTCATATCG 100 29
        sigO NONE
HC660_RS16740 3193944 .. 3193977 - -12.6  -2.73875   CGGGGGTGAACAGCA     GAAAACGGGAACCT GCAAAA ATGTTCCCGTTTTC      TTAGAATGAGGTATC  90 42
        yvrH NONE
HC660_RS16730 NONE
HC660_RS16725 3190409 .. 3190428 - -13.6  -4.81249   CTTTAAATGCAAAAA            CGCATCCG TTTT CGGATGCG             TTTTTTTTATAACTC 100 32
HC660_RS16715 NONE
HC660_RS16710 NONE
HC660_RS16705 3185877 .. 3185893 -  -2.3  -2.79501   TATAGTTTCATCATA              TCTGT CTCCTTT ACAGA              CTTATTCAAGCAGGT  41 27
HC660_RS16700 3185252 .. 3185276 -  -6.4  -5.77571   ATGAAAAAATAAAAA          GCCGGCATGT ATTGA AAATGCCAGC          TTTCATTCATGTTTT 100 28
HC660_RS16695 3183816 .. 3183834 - -10.3  -5.61596   AGCGGCATAAAAAAA             GCCATGC ACGAG GCATGGC             GTCTTCAAAAACCTT 100 40
HC660_RS16690 NONE
HC660_RS16685 NONE
HC660_RS16680 NONE
HC660_RS16675 NONE
        liaS NONE
        liaR 3178814 .. 3178828 -  -5.6  -3.25341   ATCGGAAGATCAAGA               CGGCCT ACA AGGACG               GAAAGTTCAAATTCA  54 370
HC660_RS16645 NONE
        fumC 3173744 .. 3173764 - -15.5   -3.8397   ATATATTTAGAAGAA            CGGCTGCTT CAC AAGCAGCCG            TTTTTTCTCTATTAC 100 37
HC660_RS16630 3172027 .. 3172037 -  -2.6  -5.61596   AGCTGGAGAAAAAAA                 TAAA AGA TTTA                 TTATATTTAACAAAG  89 518
HC660_RS16615 3168786 .. 3168808 - -13.5  -5.78622   CTAGGCTAAAAAAAA           GCTGAACCC TCTTC GGGTTCAGC           TTTTTTGCCAGTTAG 100 37
HC660_RS16600 3165439 .. 3165458 - -12.1  -5.18995   AAGAGAACAGAAAAA            GCCGGGC TTCAGC GCCCGGC             TTTCCTTTTATGATT 100 33
HC660_RS16595 3164804 .. 3164814 -  -5.4  -2.60508   CAAGTGATACAATAT                 TCAG TCT CTGA                 TATGGTCATATATCC  51 130
HC660_RS16590 3163836 .. 3163861 -  -9.1  -3.57825   TCGAGAAAACAGCAA         GGAGCTTTC TCATTAAT GAAAGCTCC          TTTAGCCGTGTTATT  74 40
HC660_RS16585 3163521 .. 3163550 - -16.5  -5.29716   GCAACATAACAAAAA       GCAGTCTGCCGTT TATG AGCGGCAGACTGC        TTTTTTAGCCTATTC 100 35
HC660_RS16575 NONE
HC660_RS16570 3161335 .. 3161354 - -12.1  -3.38951   TCATTAATAGAGCAA            CCCGCGG ACATAA CCGCGGG             GCTTTTTTATTCGAT  90 32
HC660_RS16545 3157448 .. 3157469 - -12.3  -3.05255   TGGAACAATAACAAT           GCAGCCCGCG TCC CGCGG-CTGC           TTTCACTTTTTGAAA  87 28
HC660_RS16535 NONE
HC660_RS16530 NONE
        fadE 3151740 .. 3151761 - -11.6  -5.60993   TGCTTCATAAAAAAA           GAGCTCCG GATGTG CGGAGCTC            CTTGGGACTCAGACA 100 34
HC660_RS16520 NONE
        gcvH 3150796 .. 3150813 -  -2.7  -2.64155   GTTTGCTGAAAGCCA             TATTGGA CACC TCCCATA              GCGTTAGCGTATCCA  41 64
HC660_RS16510 3150537 .. 3150555 -   -11  -4.20817   CAGATTGTAAAAGAA             GGCAGTGA AAT TCACCGCC             AACATCAACACCAGC  88 30
HC660_RS16505 NONE
HC660_RS16500 3149764 .. 3149787 -  -3.8  -3.75115   CCTTTATAAAACGAA          CGACAAATTC ATTG GAATGCGCCG           AGAAAAATGTCATAA  55 35
HC660_RS16495 3149078 .. 3149105 - -14.2  -5.07652   TTCTGCAAAAGAAAA        GCCTTTCTGCAC ACTT GAGCAGAAAGGC         TTATATAAAACGCCT 100 264
HC660_RS16490 NONE
        metP 3147309 .. 3147319 -    -4  -2.96405   TGCACCCAAAAATAG                 CTTT TTC AAAG                 TAAATCCTCCCTTAT  47 37
        metQ 3146467 .. 3146487 - -12.6  -5.46629   AATACCCGAAAAAAA            CCCCGGAT TTCTC ATCCGGGG            TTTCAATCTTATTCA 100 34
HC660_RS16475 NONE
HC660_RS16470 3145668 .. 3145683 -  -6.8  -5.63236   ATTGAAAAAGAAAAA              GAGTGG ATTC CCACCC               TTTTTTTAAAGACCG  90 31
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB 3140284 .. 3140310 - -14.4  -4.96848   TTCTGCATATAAAAA         GGACGCGTCTGA AAA CCAGTCGCGTCC         TTTTTTATTAACATT 100 39
HC660_RS16430 3138482 .. 3138492 -  -3.2  -4.98061   AGACAGGAAAGAAAA                 GCTA GAA CAGC                 TTTATTATATTTGTT  69 58
HC660_RS16425 3137995 .. 3138019 - -13.7  -4.55128   ATGCCCAAATGAAAA          GCCAGAACTTA ATA TAAGCTCTGGC          CTCGCTGTTCAATCC 100 54
HC660_RS16420 3136791 .. 3136818 -   -13  -2.62184   CTCCTCTGGACATTA        GACTATAATGTT ATAT AACATTATAGTC         TAATGCATAATGGTT  89 54
HC660_RS16415 3135466 .. 3135491 -  -7.7  -4.82901   TCTCCTTTATAAAAA         GAAAAGGTG CGTCGCTT CACCTTTTC          TTTGATTTATTCAGC  84 32
HC660_RS16410 NONE
HC660_RS16405 NONE
HC660_RS16400 3132360 .. 3132386 -  -4.5  -2.96695   TGTCCCATGAAATCA        TTCCAGC-ATCG AAAC CGATTGCCGAAA         AGCTTCAAATTAATA  48 427
        ugpC 3130722 .. 3130743 - -15.9  -5.06414   TGGCCGTAAGAAAAA           GGTGCTCCC CGAA GGGAGCACC            TTTTTCTAATACACA 100 31
        allC NONE
HC660_RS16375 3126856 .. 3126891 - -15.6   -3.1926   AGAAAGAGCGAAAAG    TAAAAAAAGCGTGCGG AATT CCGCACGCTTTTTCTT     TAAATCGCCGTCTGG 100 25
HC660_RS16370 NONE
        pucB NONE
        pucC NONE
        pucD NONE
        pucE 3121325 .. 3121350 - -10.5  -5.14563   CGTCTCAGGAAAAAA         CAGCCCTTAGA TTAT TCCAAGGACTG          TTGCAATGGCATTGA  93 125
HC660_RS16310 3112165 .. 3112188 -   -11  -5.72616   ACTGACATAAAAAAA          CCCCGCAGAT TTCA ATCTGCCGGG           TTTACGAAGGAACGA 100 27
HC660_RS16305 NONE
HC660_RS16300 3110868 .. 3110881 -  -8.1  -4.64861   CTTTTCTAAAATAAA               CCGAG CTGT CTCGG                AGAAAGTCCGGAGTA  86 2
HC660_RS16295 NONE
HC660_RS16290 NONE
HC660_RS16285 3108171 .. 3108210 - -13.8  -4.63486   ATCTTGGCAAGAAAA  TCCCCCCTTACATATCACA ATG TATGCT-TGTAAGGGGGGA  CATAGTAATAGCCGG 100 52
        yunB 3107376 .. 3107396 - -10.4  -3.93708   AAAGAAATGACGAAA            GCCGCCTC ATGAA AAGGCGGC            TTTATTTTTTGTTTT  85 27
        lipA 3105225 .. 3105253 - -14.7  -2.85838   AACGAATAGGAATGA        CAAAAACGCCAGA TGA TCTGGCGTTTTGG        CATTATGCTTGCGCT 100 28
HC660_RS16260 NONE
HC660_RS16255 NONE
        nucF 3102939 .. 3102959 - -11.8  -4.42974   GGCATACAGAATAAA            GGGCACCC TTTTG GGGCGCCC            TTTTGTTATATATGT 100 31
        yutH 3101175 .. 3101187 -  -6.3  -3.21276   CCTGTTTTGACAAGA                CAACA ATC TGTTG                AATTTTGTGAATGTA  57 108
HC660_RS16235 NONE
HC660_RS16230 NONE
HC660_RS16225 3097743 .. 3097770 - -15.6  -5.84381   TCATGAAGAAAAAAA        GCGTTCCTCTGC TGAC GCTGAGGAACGC         TTAGAATGCTCTATA 100 36
HC660_RS16220 3095662 .. 3095688 - -16.7  -3.10244   TCTTTTAATAAAGCA         GCCAGGCTGAT ATTTG ATCAGCCTGGC         TTTTTTTATGAGAGA 100 31
HC660_RS16210 3094879 .. 3094897 - -10.3  -3.54771   CGGATAATAGCAGAA             CCGCTGA TGAAG TCAGCGG             TTTTCTGTATAACCG  81 19
HC660_RS16200 3093280 .. 3093296 - -13.7  -5.83211   CAGCAAAATAAAAAA              GGGCCTG TCT CAGGCCC              TTTTCTTCAAAACAT 100 32
HC660_RS16195 3091914 .. 3091947 - -17.7  -2.87132   CCCGTTTTTCATACA     TAAAAGCTCCTTGCA ATGA CGCAAGGAGCTTTTA      TCTTTTATATGAACA 100 30
HC660_RS16190 NONE
HC660_RS16185 3090491 .. 3090521 - -16.3  -5.58074   TAAGTATTAAAAAAA      GCCAAGTC-AGCGG TTCG CCGCTTGACTTGGC       TTTTTTCTATCATTA 100 38
HC660_RS16175 3089055 .. 3089082 -  -7.8  -5.87996   TAAGTAATAAAAAAA        GGAGTTTGTGTCA AGG TGACAC-AGCTCC        TTTTTTATTTGAAGA 100 30
HC660_RS16165 3086474 .. 3086498 - -12.9  -4.63218   CGTTTTTTAATAAAA          CAAAACCCGCG GAG CGCGGGTTTTT          AGAAAAACTTAAATT 100 24
HC660_RS16160 NONE
HC660_RS16155 3085784 .. 3085803 -  -9.4  -5.66684   GAAGGCACAAAAAAA            GCTTTCTT TAGA AAGAAAGC             GGCATTAAAACATCT 100 30
HC660_RS16150 3085018 .. 3085045 - -12.8  -5.75342   TTTCTGTAAAAAAAA        CAACGCTTCAGC CGCA GCTGAAGCGTTT         TATTCTTTCACAGTT 100 25
HC660_RS16140 3082844 .. 3082867 -   -16  -4.91109   TTTGGAGGAGAAAAA          CCCTGCCGCG AAAT CGCAGCAGGG           CTGTATTTGTTATGC 100 35
HC660_RS16135 3081376 .. 3081397 - -12.3  -5.05505   ATGATAAACGAAAAA           GGCTCTCCC GTTA AGGAGAGCC            TTTTTTCTATAAGAC 100 32
HC660_RS16125 3079944 .. 3079965 -  -8.1   -5.7946   TCCTTAATAAAAAAA           GCACCTTAT TTAA ATAAGGTAC            CTGATAACTAGTAAT 100 93
        besA 3078849 .. 3078871 - -10.8  -2.55253   ATTAACCGCAATCTA           TTGATAATGA TTA TCATTATCAA           TTATAAAAATAATCA  78 105
HC660_RS16115 NONE
        dhbC NONE
HC660_RS16105 NONE
HC660_RS16100 NONE
HC660_RS16095 NONE
HC660_RS16090 3066717 .. 3066753 -   -14  -3.03007   AACATCTGCGTAAGA    TAGAAAAAGAGACTGC CTGCT GCAGTCTCTTTTTTTA    CCGTCAATGCATTTA  95 38
HC660_RS16070 3062600 .. 3062637 -  -9.1  -2.88663   ATTCACCCTTACATA   GAAAGAGCGCCGTCTTC TGGT GAATCAGGCGCTCCTTC    CCTTTCATACTGTTA  68 38
        yukD NONE
        essB 3060913 .. 3060923 -  -2.4  -2.85985   ATAATAGACTCAAAT                 GGCG AAC CCCC                 TAACGGCCGAAATAC  41 73
        essC NONE
        esaA 3053135 .. 3053171 -   -11  -3.16088   AGAGGGTATGAAAAG    GGAAAAGGAGAGCATA CATAT CATGATCCCCTTTTCC    AAGCTGCGATTACGC  80 35
        essA 3052684 .. 3052699 -  -5.4   -4.4078   CGCTTTTAAGCAAAA              CAAGCG CGGG CGCTTA               CGCCTTTTTATTATC  69 23
HC660_RS16040 3051884 .. 3051902 -  -8.9  -5.71712   TTCTATATAAAAAAA             GAGCAGA TTCAC TCTGCTC             TATAAAAACTCTTTT 100 25
HC660_RS16035 3051128 .. 3051159 -  -3.8  -3.75461   GAAATGGTGATGAAA      CGGAGACAGCG AAGAAAACAGA CGCTGT-TCCG      AATACAGGCGGGATC  55 40
HC660_RS16030 3050718 .. 3050740 -  -2.7  -4.74103   CGCTTAACTGAAAAA          TAGGACGTCC CGGT GTACG-CCTA           TTTTTCAAACGCAAG  65 46
HC660_RS16025 NONE
HC660_RS16020 3049086 .. 3049114 - -11.1  -5.60689   TTATACAATAAAAAA        GCAACAGCCTCTC TAG AAAAGGCTGTTAC        CCGTTAAACGAAACG 100 22
HC660_RS16015 NONE
HC660_RS16010 3048299 .. 3048317 - -11.8   -5.1356   TGCCATGAATAAAAA             GACAAACG GTC CGTTTGTC             TCTTAAGATTTCAGC 100 28
HC660_RS16005 NONE
HC660_RS16000 3046154 .. 3046180 - -11.7  -5.61596   ATTCCCACAAAAAAA        CTGGCCTCTTCG CGAA CGAA-AGGCCAG         TTTGCTTTATTCTTC 100 32
HC660_RS15995 3044382 .. 3044404 -  -5.5  -4.33907   GACAAACACCGAAAA           GACCGCAAC GCAAA GTTGTGGCC           TTTTTGCTTTGTCAT  68 443
        degQ 3043857 .. 3043872 -  -7.6  -6.00814   AAGAACGAAAAAAAA              GACTTG TTTC CAAGTC               TTTTTTACGAAATTT 100 30
HC660_RS15980 NONE
HC660_RS15975 3042307 .. 3042319 -  -2.7  -4.04394   TTTAAAGTAACTAAA                TCAAA ATC TTCGA                GATGAATCTTTTTTC  55 345
        comA NONE
HC660_RS15960 3039155 .. 3039180 -  -7.6  -2.59069   ACCTATAAAAATGAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTTGTG  62 31
HC660_RS15920 3032903 .. 3032925 - -12.1  -5.01535   TCATAATCAGAAAAA           GAGTTCCGT TTTAG ACGGAACTC           TTTTTTATTTGTTCA 100 30
HC660_RS15880 3023140 .. 3023167 - -17.2  -5.42514   CCATAAACGAAAAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 6
HC660_RS15860 NONE
        kapD 3018464 .. 3018475 -  -5.8  -3.70674   TCACCATCCAAAACA                GGCA GATG TGCC                 GTTTTTCCATGAAAG  59 272
HC660_RS15835 3015319 .. 3015334 -  -6.1   -5.9218   CACAGAATAAAAAAA              CCGGT TTGTAT ACCGG               TTTTTCAAGGCGTGC 100 30
HC660_RS15825 NONE
HC660_RS15820 3012599 .. 3012640 -  -2.3  -4.84274   TAAGCATATCAAAAA GAGGGTATACTGCAAATACC AAA GGC-TTTCTAGTATTCCCCC TTTTATTGGATGCGA  64 62
        yugI 3012050 .. 3012073 - -13.2  -6.00086   ATAGGATAAAAAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTCATGCTTACT 100 36
HC660_RS15805 3010366 .. 3010392 - -12.3  -5.29846   AAGTTCAAAGAAAAA         GGGAAGCAGCC TGATC GGCTGTTTCCC         CTTTTGTTATAGAGA 100 32
HC660_RS15800 3009094 .. 3009117 - -15.4   -4.4846   CAAGTCAAGAAGAAA          GGACGGAATG ACTG CATTCCGTCC           TTTGACATTAGAGTG 100 33
HC660_RS15795 3007628 .. 3007651 - -12.4  -4.85599   CTGATTTGATAAAAA          GCCGACCGGC TAAT GCCAGTCAGC           TTTCTTACATTAATC 100 35
HC660_RS15790 NONE
HC660_RS15785 3006698 .. 3006725 -    -7   -4.9725   ATCGGCATACAAAAA        GAGGAAGGGC CTATGATT ACCCCTCCTC         TTTCATATAAAGTGC  82 66
HC660_RS15770 NONE
HC660_RS15765 3004376 .. 3004399 -  -6.7  -5.71638   GAATAAGCAAAAAAA          GCCCTTACC GTAAAT GGTAAGGGG           CCACCTCCTTAACGT 100 40
HC660_RS15760 3003054 .. 3003073 -  -6.4  -5.43866   GAATGCTCAAAAAAA            CAGCCG CGTCTAGC CGGCTG             TTTTTGATTAAAACT  89 33
HC660_RS15755 3001216 .. 3001234 -  -2.3  -5.62288   TGAAGAAAACAAAAA             CTCTAGC TTTTT GCCGGAG             TTTTATTGCCATAGG  79 28
HC660_RS15750 NONE
HC660_RS15745 NONE
HC660_RS15740 2999387 .. 2999415 -  -9.6  -4.58663   ATCACCCGCTAAAAA        CCCCACCGTC TATTTTGGG GACGATGGGG        TTTCAAATGCTTTTC  88 6
HC660_RS15730 2996469 .. 2996487 -  -8.8  -5.71712   TGTTATACAAAAAAA             CAGCGCTT CAT ACGCGCTG             TTTTTTGCTCTTATT 100 36
HC660_RS15725 2994300 .. 2994329 -  -5.1  -4.64495   ATTCAAGAAAAATAA       CTAAATCCCTATT AAAA ATTAGTGATTTAG        ACCTATTAATCATCC  70 31
        mcpA 2992189 .. 2992212 -  -9.6  -6.11019   AAAAACTAAAAAAAA          CACCCAGGTGC AGA AC-CCTGGGTG          TTTTGACCAATTATT 100 36
HC660_RS15715 2990088 .. 2990113 -  -9.8  -5.80003   TTAAGAAACAAAAAA         GAAAGCAGCA AAGATA TGCCGCTTTC          TTTTTCTATTAAGAT 100 34
HC660_RS15710 NONE
HC660_RS15705 NONE
        rhaB NONE
        rhaM NONE
        rhaA 2983960 .. 2983987 - -19.2  -5.81032   CAAGCCTAAAAAAAA        CCGCCCGCG-GCA TGT TGCACGCGGGCGG        TTTTTTTAAATAATC 100 31
HC660_RS15680 2981568 .. 2981595 -  -3.5  -3.48924   TTATTTTTTACATAA       CGGGAGCCTTCCA TAAA TGGAAAGC-CC-G        TCTTATATAACTATA  49 49
HC660_RS15675 2980666 .. 2980687 -  -9.5  -5.72616   ATTGACAGAAAAAAA           TAAGGCCCT TTCC AGAGCCTTA            TTTTTCGATTCACAT 100 35
HC660_RS15670 2980490 .. 2980506 -  -9.5  -6.20267   TTAAAAACAAAAAAA              CCCTTAT AGA ATAAGGG              TTTACAGGTATGGAG 100 34
HC660_RS15660 2977679 .. 2977701 - -13.5  -5.02502   GAGAGTACACAAAAA           GCCTTTCCC ATCAA GGGAAAGGC           AGTGATCAAGTATCT 100 31
HC660_RS15655 NONE
HC660_RS15650 2976313 .. 2976333 - -11.9  -5.44119   GTGATGTTAAAAAAA            TCCGGCATA TTA CATGCCGGA            TTTTTTATGATTCAA 100 30
        betB NONE
        gbsB 2969686 .. 2969708 - -10.6  -5.49729   AATTATCCAAAAAAA           TCCCGCTC TGTAAAG GAGCGGGA           TTATCGCATTATACA 100 34
HC660_RS15615 2969029 .. 2969063 - -23.2  -5.41941   GAAATTAAACAAAAA     GCAGAAAGAGTCTGAT TTA ATCAGACTCTTTCTGC     TTTTTGTTTAATGTT 100 11
HC660_RS15605 NONE
        floT NONE
HC660_RS15595 2965729 .. 2965759 - -22.7  -3.20361   AAAAGCTTAATCTAA       CAACCCCCAGCGG CCGTT CCGCTGGGGGTTG       TTTTCTATCTTCTGT 100 30
HC660_RS15585 2962895 .. 2962920 - -11.3  -2.72371   GTTTTCAAAGAACAC         GTTTCGAAGGA ATGA TCCTTCAAAAC          TAAACAAGACAGGGA  78 87
HC660_RS15580 2959838 .. 2959855 -  -8.5   -4.0031   ATCGCCACCAAACAA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGGT  77 54
         rrf 2959701 .. 2959716 -  -7.6  -3.31322   GCTAATCCTCCATAA              TTGCAC TAAC GTGCAA               TTGCTTGGCGGCGTC  67 28
HC660_RS15570 NONE
HC660_RS15565 2959498 .. 2959510 -  -3.5  -3.09648   CAAGAGACTTGAATA                TTATA TCA TATAA                AAGTGGTGCCGGCAA  46 29
HC660_RS15560 NONE
HC660_RS15555 2959289 .. 2959317 -  -4.5  -3.09516   TGTTCTACCACTGAA        CTACTTCCGCA GAAATGG TGCGGATGAAG        GGACTTGAACCCCCA  50 12
HC660_RS15550 NONE
HC660_RS15545 2959124 .. 2959134 -  -2.4  -3.60151   GGGCGCAAATGATAA                 TGCC GAG GGCC                 GGACTTGAACCGGCA  48 15
HC660_RS15540 NONE
HC660_RS15535 NONE
HC660_RS15530 NONE
HC660_RS15525 NONE
HC660_RS15520 NONE
HC660_RS15515 NONE
HC660_RS15510 NONE
HC660_RS15505 NONE
HC660_RS15500 NONE
HC660_RS15495 NONE
HC660_RS15490 NONE
HC660_RS15485 NONE
HC660_RS15480 NONE
HC660_RS15475 2957825 .. 2957837 -  -3.3   -2.8294   CATGGCGGAGAAGGA                GGGAT TTG AACCC                TCGCGCCGCTTACAC  44 0
HC660_RS15470 2957709 .. 2957727 -  -8.9  -6.11229   AGGAAAATAAAAAAA             CCTTGCA GGATA TGCAAGG             TTTCAGGATGACCCG 100 31
        glgB NONE
HC660_RS15460 2954433 .. 2954453 -  -2.6  -3.21993   ATCTATAACACCTAA            CATTTGAT TATTG ATCAACTG            ATTCTGCCTCCTCTT  46 47
        glgD NONE
        glgA NONE
HC660_RS15445 2949564 .. 2949580 -  -9.4   -5.7946   CTTTGAACAAAAAAA              GCCGCT CAAAT AGCGGC              TTTTTTACACCATCG 100 30
HC660_RS15430 NONE
        menD NONE
        menH NONE
        menB 2943059 .. 2943085 -  -8.7  -4.90471   ATTTAAAAGAGAAAA         CAGCTTGGACC GCAAT GGCTCAAGCTG         TTAGTTTCATACGTA  91 49
HC660_RS15410 NONE
        menC 2940342 .. 2940361 - -10.7  -5.71712   TTTCACATAAAAAAA            CCGGCTG GTTCAG CAGCCGG             TCCAAACGAGAAGGG 100 107
HC660_RS15400 NONE
HC660_RS15395 NONE
HC660_RS15390 NONE
HC660_RS15385 2936269 .. 2936296 - -12.8  -3.50746   TTTGTAAAAATAAAG        GAAAGAGCTGGC ATTA GACAGCTCTTTC         TTTTTGTGCTTTGAG  95 11
HC660_RS15365 2933162 .. 2933180 -  -6.7  -5.69473   GAGACCAGAAAAAAA            GGCATGCC CTGC GGC-TGCC             TCATTTTCCCATGTT 100 26
HC660_RS15360 2932216 .. 2932226 -  -2.6  -3.78934   CCTTTCCGATAAGAA                 TTAT CGA ATAA                 CTTTTCAAACCGCGT  51 306
HC660_RS15350 2931644 .. 2931671 - -13.6    -5.252   CACCGTCACAAAAAA        GACCTTTTTGCC CGAA AGCAAAAAGGTC         TTTTTTCTATTTAGC 100 36
HC660_RS15345 2931089 .. 2931099 -  -3.2  -3.61715   GACCCTCCTCAAGAA                 GGAA ATG CTCC                 CGGTTCAGATCCAAA  51 44
HC660_RS15335 2930375 .. 2930399 - -10.8  -5.33405   GCGAGCAAACAAAAA          CCGGACATCT TCACG AGATATCCGG          CCTTTCTTTTCTATT 100 39
HC660_RS15330 NONE
        ytkD 2929139 .. 2929157 -  -7.3   -5.1523   GGCAGAACATAAAAA             GCCCGGC AGATA GCCGGGT             TTTTAGTTGATCCAT  85 28
HC660_RS15305 NONE
HC660_RS15300 2925303 .. 2925326 - -12.5  -4.77757   GTTTAAAAAGCAAAA          GCCAAGAGC AATTCA GCTCTTGGC           TTGTTTTAATTGACT 100 31
        metK 2921974 .. 2921994 - -11.2  -4.08285   GATAAAAAAGGGAAA            GCCGCTTA ACCAG TAAGCGGC            TATAAAATTATTCTC  86 33
        asnB 2919922 .. 2919949 - -13.6  -3.80174   ATACTGGTATAATAA        CAAGGCTTTCGA CGAA TCGAAAGCCTTA         TCTGTTAAACAAAGA 100 30
HC660_RS15280 2918403 .. 2918419 -  -5.8  -5.65927   TACTTAAACAAAAAA              GAGCCC GCCGG GAGCTC              TCTTTGTCAGCTGAT  89 32
HC660_RS15270 NONE
        tbcS 2915696 .. 2915720 - -11.6  -5.81412   GCGATCGAAAAAAAA          GCTCAAATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAGTT 100 8
HC660_RS15250 2913703 .. 2913725 - -13.5  -5.60993   TTTTTTACAAAAAAA           CGGACCCTT ATCAA AAGGGTCCG           TTTCTTACACATCAA 100 30
HC660_RS15245 NONE
HC660_RS15240 NONE
HC660_RS15235 NONE
        ytrC NONE
HC660_RS15225 NONE
HC660_RS15220 NONE
        ytrF 2908114 .. 2908132 -   -16  -5.03994   CGCTATACAGAAAAA             GCCGGCTG GTT CAGCCGGC             TTTTCTTGATTACAA 100 35
HC660_RS15210 NONE
HC660_RS15205 2906332 .. 2906355 - -11.8  -5.55001   GAACAAAAAAGAAAA          GCATGTGACA TTTT CGTCACATGC           TAATGACATGTTCGA 100 18
        bceA NONE
HC660_RS15195 2903518 .. 2903552 - -20.3  -4.13654   CGCCGAAACGATAAA     CAGTAAAAGCTCCAG TTTCT CTGGAGCTTTTACTG     TTTTACAATGCCGAC 100 28
HC660_RS15185 2901360 .. 2901382 - -10.6  -4.68593   CCGATTATGTAAAAA           GATCCCGC TCATCCG GCGGGATC           TTTCTTATGAAGAAA  89 30
HC660_RS15175 2899502 .. 2899530 - -10.3  -6.02546   CCAAACTAAAAAAAA        CTCCCTCATCCCT AAA AGGGACGAGAGAC        TTTCGTTTTCCCGCG 100 328
        leuS 2896959 .. 2896979 -  -9.8  -5.53991   GACTGATGAAAAAAA            TCCCCTTT TTGAC AAAGGGGA            TTTTTCCAGGATTAG 100 37
HC660_RS15165 2896545 .. 2896566 - -10.1  -6.04953   ATACAAATAAAAAAA           CTAGGGGTG ATCT CTCCCCTAG            TTTTTCGGTTTCGTT 100 22
HC660_RS15135 2889924 .. 2889951 -  -9.8  -4.92783   AATCCACTAGAAAAA        GAAGAGACGGGC AGAC GCTCGCCTCCTC         ACCTGTATAGAATCA  93 77
        bioW NONE
        bioA NONE
        bioF NONE
        bioD NONE
        bioB 2884726 .. 2884758 -  -9.3  -4.85599   TTGACTCTATAAAAA      TAAAAGCAATCGACA TGA CACCGATTGCTTCTA      TTCTTGCTTTCAGCT  91 35
HC660_RS15105 NONE
HC660_RS15100 2882616 .. 2882644 -    -9  -5.56263   ATCATAAAAGAAAAA        GAGCATAATCTT AGAAA ATGATTATGCTC        TGTTATTGCCGTTCT 100 18
HC660_RS15095 NONE
HC660_RS15090 2880018 .. 2880042 -  -5.8  -5.05079   AGAAGCATATAAAAA          CCCAAAAC CACTTGCAC GTTTTGGG          TTTTTCACTATTACT  80 36
HC660_RS15080 NONE
        rmgQ NONE
HC660_RS15070 NONE
HC660_RS15065 NONE
HC660_RS15060 NONE
HC660_RS15055 2872629 .. 2872655 - -13.8  -5.37345   CTTAACCATAAAAAA         GATCTTCCCGCA GTA CGCGGAAAGATC         TTTTTTATTTTCGAT 100 30
HC660_RS15040 2867748 .. 2867764 -  -7.2  -4.77173   TTTCTATAAAAGAAA              GCCCGC ATCAA GCGAGC              CCTCTCGTTTCAACA  81 48
HC660_RS15035 2866975 .. 2866995 - -11.2  -5.27206   TATATATAATAAAAA            TCCCGCAT GTGAG ATGCGGGA            TTTTTTCATGCTTGC 100 31
HC660_RS15025 NONE
HC660_RS15020 2864477 .. 2864507 - -15.6  -3.15013   ATTCTATAACATACA       GAAAACCCAAACGG CAT CCGTTTGGGTTTTT       ATTTCATCAAAAAAG 100 24
        pepV 2861653 .. 2861678 - -13.3  -5.40474   ATTTGTGTAAAAAAA         GGACTGGCTTC AGAA GAAGCCGGTCC          TTTTATTTTGCAAGT 100 28
        thpR NONE
HC660_RS14995 NONE
HC660_RS14990 NONE
        pulA 2855842 .. 2855881 -  -2.3  -5.95286   ATGAAAAATAAAAAA  GACAGCTATTGA-GAG TCTCATATG CTAATCAATAGCCGTC  TTTTAAATTTTAGCG  90 79
HC660_RS14980 2854559 .. 2854583 -  -2.2  -5.71712   CTTCACATAAAAAAA         GAG-GTTCC CGTCTGTC GGAACACTC          GTGTCTCATGCATAA  84 378
        trmB 2853795 .. 2853816 -  -8.1  -5.94713   AGCGCATAAAAAAAA           CAGACTCCTG CGT CAG-AGTCTG           TTTTACGCTCTCCAT 100 28
HC660_RS14965 NONE
HC660_RS14960 2851088 .. 2851113 - -14.7  -3.42437   CAAGCGTAAAAGAGA         GGAGCCGCTGC CCAT GCAGCGGCTCT          TTATATTATATCGCT 100 31
HC660_RS14950 2849466 .. 2849502 -   -11  -5.77677   CAAAATAAGAAAAAA   GCTTGTCGA-CATGGCT TACA AGCCTTGCTCAACAAGC    TTTTTCTACAGGTTT 100 40
HC660_RS14940 NONE
HC660_RS14935 NONE
HC660_RS14930 NONE
HC660_RS14925 2846942 .. 2846965 - -13.2  -4.72007   TTTCAGCAAAACAAA          GCCGCTAAAC AAGA GCTTAGCGGC           TTTTTTTACATGATT 100 68
HC660_RS14920 2843804 .. 2843815 -  -7.2  -4.07568   CGCGGCGGCTGAAAA                GCCG CCTG CGGC                 GTATCCTTATATTTT  73 181
HC660_RS14915 2842399 .. 2842426 - -14.4  -4.03234   TTCTCTTCAGATAAA        TAAAAAGCAGTG AGAT CACTGCTTTTTA         TTATGCCATGACGTT 100 26
HC660_RS14910 NONE
HC660_RS14905 NONE
        ytxJ 2840977 .. 2840998 -  -9.5  -6.34424   TTTTCAAAAAAAAAA           GCG-CCAGAT CAT ATCTGGACGC           TTTTTTTCTAGGACA 100 33
HC660_RS14895 2839657 .. 2839672 - -11.8  -5.49809   GAAAGCGCAAAAAAA              GGCCGC ATAT GCGGCC               TTTTGTATTGATCTC 100 47
        ccpA 2838365 .. 2838394 -  -8.7  -5.22312   ACTCATACGAAAAAA       GCAAGAATTCACCT TAG AGGTGAAG-CTTGC       TTTCTTGTTTTTCTT 100 39
        motP NONE
        motB 2836784 .. 2836827 - -13.6  -5.14965   AGCGCCAGGAAAAAA CAAAATAAAAAACGACCTTCA CGA TGA-GGTCGTTTTTTATTTTT TGATGACGATTTCCA 100 18
        acsA 2832131 .. 2832156 - -15.5  -5.67711   TAAATAAAATAAAAA         CGCCCCTTCGT GTAA ACGAAGGGACG          ATTGATTATCGCGGT 100 312
HC660_RS14855 2830795 .. 2830821 - -11.7  -5.01811   GCACTAAACCAAAAA         CATCCTTTGCC AATTA AGCAAAGGATG         TTTTTTTCTTATTTA 100 34
HC660_RS14845 2829698 .. 2829709 -  -2.2  -2.78384   TTTTTGTTTATTATA                TCAC AACA GCGA                 AGCAATAATGAACGA  41 51
HC660_RS14840 2827878 .. 2827902 - -10.8  -4.84914   ATGCATACAACAAAA          GCCCAAAACA TGTAG CGTTTTGGGC          TTTTTTCATTTTTTT  91 31
        refZ 2826548 .. 2826563 -  -3.2  -3.25657   GAAGCAAAAAAATAT              CCCG CTTGTGTT CGGG               TCTGATGCCCATCAA  46 72
        ezrA 2823893 .. 2823917 -   -10   -5.4505   TTTTTTAATAAAAAA          GAGCCCGC TCATCAACT GCGGGCTC          TTTTTACGATCTGAA 100 43
HC660_RS14810 NONE
        thiI 2819893 .. 2819906 -  -5.3  -3.54475   CTTGTGAGTATAGAA               TGTGT CAAA ACACA                TGGCTTCATACAGAA  57 77
HC660_RS14800 2819604 .. 2819624 - -12.6  -5.31158   TAAAAAAACGAAAAA            GAGTGGGG AAAAG CCCCACTC            TTAAGCCATTATGTG 100 51
HC660_RS14795 NONE
HC660_RS14790 2816246 .. 2816266 -  -8.3  -4.75518   TATAGAAAATGAAAA            GGACAGG CTATTCC CCTGTCC            TTTTTTATTGGTGAT  87 30
        sppA NONE
HC660_RS14775 2813704 .. 2813728 - -17.3   -5.1675   CCATTCAGCAAAAAA          TAAACCCGGAC GGG GTCCGGGTTTA          TCTGTTATTTACGAT 100 30
HC660_RS14770 NONE
        ytfJ 2812477 .. 2812501 - -17.3  -5.79526   ATATGCCAAAAAAAA          GTTAACTGCGG CCG CCGCAGTTAAC          CCTTCTTTAATAATT 100 32
         tpx 2811861 .. 2811881 -    -9  -5.14563   CTTGCCATGAAAAAA           GCTCC-GGC GGCA GCCTGGAGC            TTTTTTCACCTGCTT  91 39
HC660_RS14755 2810803 .. 2810835 -  -6.3  -5.71712   GTTCATACAAAAAAA      CAGCTTAAGCTTCCT CAG ACGGAGCTCAAACTG      TTTTCATTTTTCTAT 100 37
HC660_RS14750 2809288 .. 2809307 - -10.8   -5.4505   TGCTTCAACAAAAAA            GCACATTC AAGA GAATGTGC             TTTTTTGCATTATTT 100 35
HC660_RS14745 2808682 .. 2808704 -  -6.3  -5.52384   CTTTTATTAAAAAAA           CTTCACCCA TTTTT CAGGTGAAG           TTTCGTAGTATTTAT  89 45
HC660_RS14740 NONE
        argH 2805748 .. 2805766 -  -9.6  -5.71712   TGCCATACAAAAAAA             GCTGCCTA TAA TAGACAGC             TTATTCCGCAGAAGA 100 222
HC660_RS14730 NONE
HC660_RS14725 2804090 .. 2804114 - -17.3  -5.50723   GCAGGAAAATAAAAA          GCATCTCCTGA TTT TCAGGAGATGC          TTTTAGCGATTAAAG 100 35
HC660_RS14720 2802458 .. 2802468 -    -4  -4.58283   CAATCTTTGGAAAAA                 GAAA TCT TTTC                 AGCAAAATCCAGCAT  66 244
HC660_RS14710 2801280 .. 2801293 -  -8.1   -3.1917   ATGAACACTAAGAGA               GAGGG TCTC CCCTC                TACTTGTGTTCTTTA  68 25
        dnaE NONE
        maeB 2795235 .. 2795262 - -12.7  -3.36671   AGTTTAACTTGAGAA        CAGCGCGCCGG TCTCCG CCAACGCGCTG         CCATTTTTGGAATGA  95 48
        accD NONE
        accA 2793088 .. 2793115 - -12.2  -5.27923   GAATGTCACAAAAAA        TAAACGTG-AGCC AAA GGCTTCACGTTTA        TTTAGTTTACCCCGA 100 27
        pfkA 2791951 .. 2791969 -  -4.5  -3.04517   ACTTCCTTCTAAAAT             CTTCAGC CTTCT GCTGCAG             TCTTAAATAGACAGT  49 28
         pyk 2790129 .. 2790162 - -13.3  -3.25472   ATAGTGCCAAATAGA     GAAAAAGGAAGGGAA TACG CCCCCTTCCCTTTTC      AGATGTGATTAAAGT 100 34
        fxsA 2789662 .. 2789686 -  -7.8   -5.3104   CCAGCAAAAATAAAA          CAGCAGCCCA TGATG CAGGCTGCCG          TTTTTCATTTTATAA 100 30
HC660_RS14650 2787963 .. 2787977 -  -8.5  -6.22802   CGGCATAAAAAAAAA               GCGGC AGCAA GCCGC               TTTTTTTTATGAAGT 100 32
        citZ 2786493 .. 2786523 -  -6.3  -3.62046   TGATGTTCTGAACAA      GAGGCTAACTTCAT TACC AT-AAGCCAGCCTC       CCATGGTTCTTTAGG  62 36
         icd NONE
         mdh 2784081 .. 2784111 -  -7.1  -5.07486   CATTTGTAATAAAAA      GAGAAAGGCTTCGAT TAA ATC--AGCCTTTCTC      TTTTTATTTTAGGAT  85 34
        phoP NONE
HC660_RS14625 2781320 .. 2781346 -  -5.9  -5.48787   AGAACACACAAAAAA        GGACGGGAAC ACAAAAAG GTTCCCG-CC         GTCAAAATTGGCTCC  85 119
        polA NONE
        mutM 2777615 .. 2777633 -    -6  -3.02984   GGAAAAGTGATAAAT             CCGTGTTT CCG AAAAACGG             CACTTCCTCTATAAC  56 88
        ytaF NONE
HC660_RS14605 2776256 .. 2776277 - -13.1  -4.98255   TTTTAATCACAAAAA           CACCGTTCA TCAA TGAACGGTG            TTTTGTTATGCCCAG 100 31
HC660_RS14590 2773591 .. 2773615 - -12.1  -5.95946   TGAAGAATAAAAAAA          GCAGCCAGCGC TGC GCACTGCCTGC          TTTATTTTCTTATGA 100 35
HC660_RS14585 NONE
HC660_RS14580 2771713 .. 2771758 - -12.7  -5.35224   TTCATAAAAATAAAA GGAGCATAAGCTAAAAAGCGCG TAA CG-GCTTTCTAGCTCCAGCTCC CTTTGTGTTCGTGTT 100 45
        nrdR 2771020 .. 2771043 -  -8.2  -4.50976   TTGCACATGAGAAAA          GAGCTAGAAG AATC CTTTTAGCTC           TTTAACGCTCTTTCT  83 27
        dnaB NONE
        dnaI 2768555 .. 2768575 -  -2.4  -3.14931   CGCAGCGGTTATTAA            TGGCGGCG GTTTT CTCCGTCA            AGACGGATCGGAGCA  43 1
HC660_RS14560 NONE
        ytxC 2766582 .. 2766607 - -11.1  -4.96848   TTTTGCATATAAAAA         CCCCGCCCCCT ATGA AAGGGACGAGG          TTGAATAAACGGAAT  93 365
        thrS 2764586 .. 2764611 -   -12   -5.7827   AACATAAATAAAAAA         GCATGATCTC TTTCAT GAGATCATGC          TTTTTTTATCATTTC 100 34
        lytS NONE
HC660_RS14535 2761130 .. 2761154 -  -5.6  -5.22289   GATGAAATACAAAAA          GCCGCCCCGT CAAAT ATGGAGCAGC          TTTTTTAATTCCTTG  81 10
        lrgA NONE
        lrgB 2759826 .. 2759846 - -15.5  -5.32599   CATAAAATAGAAAAA            GCCAAGGCT GTC AGCCTTGGC            TTAACCTCCGATCAG 100 26
HC660_RS14515 2758602 .. 2758627 -  -8.3  -5.30616   GCAGGCAAACAAAAA         GTGCGGGCATT ATAA AACACCCACAC          TACGAACATCTGTAT 100 248
        infC NONE
        rpmI NONE
        rplT 2757380 .. 2757398 - -14.6  -5.36441   CCTTTATATAAAAAA             GCCGCTCT TAG AGAGCGGC             TCTATATCATTATTT 100 35
HC660_RS14495 2757054 .. 2757080 - -11.6   -5.4477   AAACTTGCAAAAAAA         GCAGAAGAGCGC TAA ACGCTTTTCTGC         TTTTTTATAAATCAA 100 30
HC660_RS14485 2755367 .. 2755394 - -12.8  -5.76633   GTACAGACAAAAAAA        TAGAATCCGCCT CACA AGGCGGATTCTT         CCGTATCTTTATTGG 100 34
HC660_RS14480 2754207 .. 2754224 - -11.3  -5.40072   TTTCTTTTAAAAAAA             GCCAGGT GTTC ACCTGGC              TTTTCAGTTTAATAG 100 34
        araA NONE
        araB NONE
        araD NONE
HC660_RS14460 NONE
HC660_RS14455 NONE
HC660_RS14450 NONE
HC660_RS14445 NONE
        araQ NONE
HC660_RS14435 2743472 .. 2743492 -  -5.4  -5.42605   CTAACAAAAATAAAA           GACCGGAGA CAGA CCTCCGG-C            TAATGTTGCCCATTA  83 38
HC660_RS14430 NONE
HC660_RS14425 2740939 .. 2740963 - -17.3  -4.39277   TAACATCATAAGAAA          GCCCAAAACAG TGT CTGTTTTGGGC          TTTGTGCTTTATTCC 100 34
HC660_RS14400 2735530 .. 2735556 - -15.2  -6.09196   TGGAAAACAAAAAAA         CCCGCCCCTTGT AGG ACAAGGGACGAG         TTGTGGCCGCGGTAC 100 299
        pheS NONE
HC660_RS14385 2731979 .. 2732001 - -12.1  -5.36441   CGTTCATAGAAAAAA           GCTTGCAGA TGTTC TCTGCAAGC           TTTTTTATTAGCCTC 100 33
        zapA NONE
HC660_RS14370 2730077 .. 2730095 -  -5.3  -5.45726   CATACTTGAAAAAAA             CTTCTCC GGACA AGAGAAG             TTTTTTATCCTCCGT  83 30
        polX NONE
HC660_RS14360 NONE
HC660_RS14355 2725394 .. 2725421 - -10.1  -5.78622   GGACGGCAAAAAAAA        GAAAAAGAAAG GAAAAT CTTTCTTTTTC         TCAAAATATGAACAG 100 122
HC660_RS14350 2723555 .. 2723572 -  -7.1  -4.03234   TCCTTCCTATATAAA             TGAATGA CTAT TCATTCA              TATTTTTATGATAAG  72 101
        fadR NONE
HC660_RS14340 NONE
        etfB NONE
HC660_RS14330 2720322 .. 2720346 - -13.6  -4.19817   CGTATGTATTCAAAA          GCCCCGAACT TCTGC AGTCCGGGGC          TTCCCTTTATGAGTG 100 32
HC660_RS14325 2718621 .. 2718649 -  -6.7  -5.79595   TTTCAAAACAAAAAA       GAGCGCTG-TCC TCTAAT GGATCGGCGCTC        CTTTTTTTGGTTAAG 100 36
        trxA 2717987 .. 2718008 -    -8   -5.7946   TGGCGAATAAAAAAA           GCGATCCC TCAATT GGAATCGC            TCTGGCATGTAAGCA 100 49
        uvrC 2715824 .. 2715849 -   -12  -5.88565   TCCACAATAAAAAAA         GCAATGAGAG GAATTG CTCTCATTGC          TTATCAATTAATCAT 100 300
HC660_RS14305 2714489 .. 2714512 -  -8.9   -4.8622   CTGTTTAATGAAAAA          GGCGGTGACT GCATG AGTC-CCGCC          TTTTTGGTTGTCATG  91 36
        sdhC 2713144 .. 2713154 -  -3.2  -3.01726   CTCTCTTATACAAAT                 GCAA AAA TCGC                 TTTTAAGCCTACGTA  45 5
        sdhA NONE
        sdhB 2710544 .. 2710563 -   -10  -5.42259   TTATTGTTAAAAAAA            CCTCTCCC ATGC GGAAGAGG             TTTTTTCTTCTTATA 100 36
HC660_RS14280 NONE
        gerE 2709695 .. 2709725 -  -6.9  -3.87737   GACAAACAGCAATAA      CCGGC-TCCCTCCT GAAA AGAAGGAATACCGG       CAAGGATTAAAGCTC  72 32
HC660_RS14270 NONE
        racE 2708200 .. 2708220 - -13.3  -5.69068   TAAAAACACAAAAAA            CCCGCAACA CGC CGTTGCGGG            GCAAAACTATCTTCT 100 32
HC660_RS14260 2706955 .. 2706985 -    -7   -4.2528   CCGGAATTGAATAAA      GAAAGAGG-CAGC CGGAAC GCTAACCTCTTTC       TTTCTAGTATATCAA  76 51
HC660_RS14255 NONE
HC660_RS14250 NONE
HC660_RS14245 2704989 .. 2705028 -  -3.6  -2.57211   ACGGTTTTTTAGAAT  TTTTTTCATGAGGAAGAA AATT TTCTTCCTCATGTGATAT   TTCATAGGGTTACAC  45 27
HC660_RS14240 2704751 .. 2704767 -  -6.5  -5.32944   CGTACAACGAAAAAA              CCCGCTA TGT CAGCGGA              TATGTCATCGTTGAT  88 83
HC660_RS14235 2703594 .. 2703620 -  -3.8   -5.5943   AAATGACCAAAAAAA        TA-GCCGCTGA ACTTAA TCAGCGACGTA         AAAATTTCCGTATTG  83 15
HC660_RS14230 2703089 .. 2703109 -  -5.5  -4.07687   AGTTCGTCTTCAAAA            TGTGAAGTA CCT TACTTCAAA            TCTTGCAGGGGGCTA  65 16
HC660_RS14225 NONE
HC660_RS14220 NONE
HC660_RS14215 NONE
HC660_RS14210 2700850 .. 2700868 -  -2.4  -3.90291   ATCTTGCTAAGTAAA             TTCTCGAC CCG ATCGATAA             TTAACGTTGCCTCTC  52 268
HC660_RS14200 2700425 .. 2700437 -  -3.4  -3.08032   TTTCCGTCAAAACCA                CGTA TTATC TACG                CCTTCATTTCGCTCG  46 4
HC660_RS14195 2700190 .. 2700203 -  -2.4  -2.72144   CCATTGCGTTCAAAT               CGAT TTTCAT ATCG                TCAGCCTCCTCGTAA  40 42
HC660_RS14190 NONE
HC660_RS14185 NONE
HC660_RS14180 NONE
HC660_RS14175 2697881 .. 2697901 -  -2.5  -2.91276   GGTCTCGCGATAAAC            CAAAAACCA TCA TGGCTTACG            TGATATCCTCGTTCT  43 219
HC660_RS14170 2696355 .. 2696372 -  -3.5  -3.46647   TGTATTTATGAAACA             TATTACA CGAA TGTAACA              TTATATACAGTCGTA  49 85
HC660_RS14165 2695302 .. 2695319 -  -8.4  -3.90588   TATCCGGTAACGAAA             CGGAGG GTTAAA CCTCCG              GCCGACCTAAAGTAC  77 32
HC660_RS14150 2693374 .. 2693389 -  -8.2  -5.21709   TTGTATATGAAAAAA              GCCGCC GAAT GGCGAC               TCTTAAGATTAACCT 100 98
HC660_RS14145 2692505 .. 2692526 -  -6.6  -2.82187   AATATGCAATACAAT           GAGGG-CGT AGCGA ACGTCCCTC           GGACCTAGTTACGTA  57 49
HC660_RS14140 NONE
HC660_RS14135 2691572 .. 2691598 -  -8.6  -3.53224   TATCTGCGCCCGAAA         CGCCGCCAGCGC TTG GCAGTAGCGACG         CGACCCGAATTACCT  74 175
HC660_RS14130 NONE
HC660_RS14125 NONE
HC660_RS14120 2689115 .. 2689155 -  -5.3  -2.91582   GACCGCACGCATAGA  CCTCGAAGAGCGAATCG TAAGTGG CGGATCGCCCTTCGTAG  AGGTTAGCGTTGCAA  53 62
HC660_RS14115 NONE
HC660_RS14110 NONE
HC660_RS14105 NONE
HC660_RS14100 NONE
HC660_RS14095 NONE
HC660_RS14090 NONE
HC660_RS14085 NONE
HC660_RS14080 NONE
HC660_RS14075 NONE
HC660_RS14070 NONE
HC660_RS14065 2679223 .. 2679238 -  -4.6  -3.62723   GATTGAAACAATTAA              GGCGGT TATA AGCGCC               GACATTGTAAGGGGA  55 462
HC660_RS14060 2678315 .. 2678327 -  -4.1  -2.78935   AGATTCGTTAGTATA                CCGAT AAA ATCAG                TCCTTTCTTATATCG  45 33
HC660_RS14055 NONE
HC660_RS14050 NONE
HC660_RS14045 NONE
HC660_RS14040 NONE
HC660_RS14035 2674356 .. 2674375 -  -6.5  -2.77182   GTGGATATCTAACGA            CTTTGAG CGCAAT CTCAAAG             CGTACATAACTATCG  53 351
HC660_RS14025 NONE
HC660_RS14020 NONE
HC660_RS14015 2671976 .. 2671989 -  -9.5   -5.4433   ATAGATAAATAAAAA               GGCGC CTAT GCGCC                CGTATGCTCTATCCT 100 17
HC660_RS14010 2671195 .. 2671212 -  -8.4  -5.05037   TAAGACAAAAATAAA             GACGCC TTAGCG GGCGTC              CTTTTTTCGTTTTAT  91 116
HC660_RS13975 2666584 .. 2666604 -  -6.8  -5.80817   TTCAAGACAAAAAAA            GACGCCGA TTTAT TCAGCGCC            CTCTTCCGTTTCTTC 100 14
HC660_RS13970 2665208 .. 2665253 -  -7.1  -5.63517   TTTTCAAATAAAAAA CCAAATTATTTTCATCCAGTGA AAA TCACCGGAC-AACGTAATTTGG CCTCTCTTTGTATTA  93 239
HC660_RS13965 2664826 .. 2664836 -  -2.4  -4.07568   CCGGCCGGCTTAAAA                 CGGC TGT GGCG                 CTTTAATTTCGTGGC  54 28
HC660_RS13960 NONE
HC660_RS13955 NONE
HC660_RS13950 NONE
HC660_RS13945 2662051 .. 2662064 -  -5.3   -3.6682   GGTGATTTAGGTAAA               TCACT CTAC AGTGA                TTAACGTAAGTCACT  59 525
HC660_RS13940 2661426 .. 2661450 -    -7  -2.57132   CGGTCGCGCTACAAG          CGAAGGGGCC CCGCC GGTCCCTACG          TTTTTGCTTTCGAAA  59 58
HC660_RS13935 NONE
HC660_RS13930 NONE
HC660_RS13925 NONE
HC660_RS13920 NONE
HC660_RS13915 2656052 .. 2656083 -  -3.5  -2.71791   ATGCCCCCGTTAAAG      GCTACGGCGTCCC AGCTAA GGGACACCGATGT       ATCTTTAGGAGTCGC  43 60
HC660_RS13910 NONE
HC660_RS13905 NONE
HC660_RS13900 NONE
HC660_RS13895 NONE
HC660_RS13890 NONE
HC660_RS13885 2653585 .. 2653609 -    -5  -5.30616   GTAGTCAAATAAAAA         GAGAG-CCGAC CGTA GCCGAACTCTC          CGTTATAAATCTATT  79 39
HC660_RS13880 2653194 .. 2653218 -  -3.5  -2.76291   TAAGGGGAAAAGGTA          CCCCGGC GTTAGTTTTTT GCCGGAG          TCTCCGCAGTGGCTT  44 9
HC660_RS13875 NONE
HC660_RS13870 NONE
HC660_RS13865 NONE
HC660_RS13860 NONE
HC660_RS13855 NONE
HC660_RS13850 NONE
HC660_RS13845 2641885 .. 2641911 -  -8.6  -4.98531   TTTCGAAATTAAAAA         GCCCGCCGGG ACTCTCA CCTGACGGGC         GTACTGCGTTTATTT  91 39
HC660_RS13840 NONE
HC660_RS13835 NONE
HC660_RS13830 2640170 .. 2640195 -  -8.2  -5.24449   CATAAACGTAAAAAA         CGCCCCATCC GGTTAA GGACGGGGCT          GCTTTCATTTATTCG 100 34
HC660_RS13815 NONE
HC660_RS13810 NONE
HC660_RS13805 2637166 .. 2637192 -  -4.5  -4.89477   TTTGCAACAACAAAA        CGAAGCGCTATCC ATC GGAC-GCGCTT-G        AACGAATTGTATTGG  75 78
HC660_RS13795 2635852 .. 2635879 -    -5  -6.09196   CCGAAAATAAAAAAA        GCCTCAAACCGTA TTA TA-GGTTTAAGAC        TTTTGGGTACGTCCC 100 258
HC660_RS13790 2634017 .. 2634047 -   -17  -3.66883   TGAAGACACTGCAAA       CCATCCACCCAGCA CTA TACTGGATGGATGG       TTATTATTTGTATTT 100 29
        ilvB NONE
        ilvN NONE
        ilvC NONE
HC660_RS13755 NONE
        leuB 2624878 .. 2624900 -    -7  -3.40867   CTACCTATGAACTAA           GACCGCTTAC ACC ATAAGCTGTC           ACACGTTAGAAATTG  66 24
        leuC NONE
        leuD 2622788 .. 2622812 - -12.1  -5.81412   GCCAGGCAAAAAAAA          GCTGCCGGACA AAT TGCCGGGCAGC          TTTTTTAAGCTTGAA 100 30
HC660_RS13735 2621521 .. 2621545 -  -4.3  -2.89837   ATTCTAAAGCAATCA          TTCGGCTTCGT CCA ACAAAAACGAA          GCTGCCAAAGATCAG  49 171
HC660_RS13730 2620135 .. 2620159 - -12.9  -4.43859   CATAATTGTACAAAA          CAAGGCACGAA TGA TTCGCGCCCTG          TTTTATTATTACTAT 100 55
        clpX 2618616 .. 2618641 - -14.1   -5.9218   TACACAACAAAAAAA         CCTCCTGAATG TTAC CACTCAGGAGG          TTCTTTTTCATTTTT 100 39
        lonB 2616825 .. 2616843 - -10.4  -5.93809   CCTTCATAAAAAAAA             CCCTATTT TAA AAATAGGG             TCAGACTGATTCTTT 100 26
         lon NONE
HC660_RS13710 2613738 .. 2613761 - -13.2  -5.73978   ACGATAAATAAAAAA          CCGGCAGAGA TCAA TCTCTACCGG           TTTATCATTTTTTTG 100 19
HC660_RS13700 NONE
        ccsA 2610806 .. 2610818 -  -2.7  -3.19668   CATTATTTAACTGAA                CCAAT GGA ATTGA                GACAGGCTTCCGAGC  44 4
        hemC NONE
HC660_RS13685 NONE
        hemB NONE
        hemL 2606710 .. 2606736 - -11.7  -5.38951   AATGCACAGAAAAAA        CCGGTA-CAAGG AAAT CCTTGATACCGG         TTTTGATAGTACTTA 100 38
HC660_RS13670 NONE
        ysxE 2603340 .. 2603369 -  -7.8  -4.63044   ATGGATATAAACAAA       CAAGTCCGCGCC AATTAA GACGTGGACTCG        TTTTCCGCCTGAAAT  83 10
        valS 2600015 .. 2600046 - -15.2  -3.28712   TCCCCTCTTTTATAA      GACAAGGCGGTTTC TCAA GAAACCGCCTCGGC       TTTTCATTAGCCCTT 100 32
HC660_RS13650 2598659 .. 2598692 - -12.6  -5.36441   TTTTGACAGAAAAAA     TCCCGGCAGAAT ATCATTATTG ATTCTGCCGGGA      CAAAGTCATTACAGC 100 34
HC660_RS13645 2597761 .. 2597785 -  -4.3   -6.3578   AGGCGAAAAAAAAAA          GAACAAGAC TTTTGTC GCCTTGTCC          AAAAAACGTTCGTCA 100 54
HC660_RS13640 2596694 .. 2596706 -  -3.3  -2.76263   TCTATTATTTAATTA                CGGCT AAA AGCTG                CTGCTGAGCCTTCCA  44 2
         maf NONE
        radC 2595171 .. 2595184 -  -2.3  -4.98531   TTCTTAAAGCAAAAA               TACCC TAAA GGGAA                AAACTCATAAACTCT  66 72
        mreB NONE
        mreC 2593207 .. 2593238 -  -4.4  -4.03782   AACATCATAACGAAA      GGGAGAAGGAAACGT TTC ACGAT-CCTTCCTCC      TCTGTATCGACAGTC  61 10
        mreD 2592697 .. 2592710 -  -2.5  -4.34482   TTCGTCAAAAAAAGA               TAAAA TCCT TTTTA                CTCATCTCTCAATTC  58 23
        minC NONE
        minD 2591118 .. 2591143 -  -8.3  -6.02919   TCAGAAACAAAAAAA         CCTGACACAGC ATTT GCTTTGTCAGA          TTCTTCTCTTTTATT 100 49
HC660_RS13600 NONE
HC660_RS13595 NONE
        rplU NONE
HC660_RS13585 NONE
        rpmA 2588232 .. 2588253 -  -8.7  -5.79526   ATATTGCAAAAAAAA           CTCCAGTCA TTAT CGACCGGAG            TTTTTGAATCATTAT 100 37
HC660_RS13570 NONE
        obgE 2586015 .. 2586037 - -14.2  -3.63744   CCCCTTTTGAAAATA           GAGAGCCTGA TAT CCAGGCTCTC           ACCCATTATTAATCA 100 34
        thrR NONE
        pheA 2584657 .. 2584669 -  -9.1  -5.63374   TGAAGACTAAAAAAA                GCCCT ATT AGGGC                TTTTTATAATTGATA 100 29
        nadB NONE
        nadC NONE
        nadA NONE
        safA 2578043 .. 2578062 -  -8.6  -5.71638   CAATAACTAAAAAAA            GGAACGAT TTAC ATCGTCCC             GAGCAATCATTCACT 100 32
HC660_RS13520 2577272 .. 2577299 -  -8.4  -5.27335   CGTTGTAAAGAAAAA        GACCGCCGG-GAA TCA CTCTCCGGCAGCC        TTCTTAGTCCTAGCG 100 35
HC660_RS13515 2576449 .. 2576477 -  -5.2  -5.27779   CCTAAGATGAAAAAA       GACCGGC-CTGAG AGCA CTTTGCGCCGGTC        TTTTCATATTACTGA  79 34
HC660_RS13500 2574026 .. 2574047 - -17.3  -4.52857   ATTCTTCATAGAAAA           GGCAGCCGC TTAT GCGGCTGCC            TTTATCACTTTATTT 100 41
        iolG NONE
HC660_RS13485 2570714 .. 2570728 -  -2.1  -3.45324   TAGTCTGACCAAAGA               GGCTA CTGCT TAACC               GTTTTCTCAAAATTT  46 13
HC660_RS13480 2570128 .. 2570143 -  -7.6  -5.86061   TTCCACGAAAAAAAA              GACATG AGCA CATGTC               TTCAATCAGCAGTGG 100 41
        ruvA 2569392 .. 2569411 -  -2.8  -2.63596   CTTCACTTGAGACGA            GCCGTTCA TCCA TGAACATC             ACCTTACTTCAATAG  41 29
        ruvB NONE
HC660_RS13465 NONE
        queA NONE
         tgt 2565960 .. 2565972 -  -3.3  -2.54371   TTTCTGAAACAAACT                TGCCA TTA TGGCT                TTTTATATTAGAAGC  43 33
        yajC 2565616 .. 2565634 - -11.7  -5.60993   TTCCTCATAAAAAAA             GAGCGGG GGCTA CCCGCTC             TTTTTTGTTTGCTAT 100 57
HC660_RS13440 2564318 .. 2564335 -  -2.7  -5.26875   CGTTTAATCAAAAAA             GATG-AGC TTC GCCGCATC             CCTGTTATCGGACGC  76 58
HC660_RS13430 NONE
       secDF 2560111 .. 2560137 - -13.8  -5.58209   TCAAACGCAAAAAAA         TCAGACTGCCCA TAA TGGACAGCCTGA         CAGTTACTCTATTGT 100 34
HC660_RS13420 2559476 .. 2559494 -  -8.9  -3.24232   TTGGTTTTAAACATA             GCTTGAC GCGAG GTCAAGC             CCCCAATGCGGTTAA  72 20
HC660_RS13415 2559017 .. 2559055 - -10.4  -2.76227   GCTAACATAAATTCA  CCCCTCAACC-ACCCTA TTATAC TAGAGCAGGCTGAGGGG   TTTCAAATATAATTC  76 46
        recJ NONE
HC660_RS13405 2556091 .. 2556108 -  -4.8  -5.31545   AACAATAGGAAAAAA             GCACCC TGTATC GAGTGC              TTTTTCCTTTATGAG  79 48
        relA NONE
         dtd 2553285 .. 2553300 - -10.4   -5.7946   TTTTCAATAAAAAAA              GCTGCC TTTT GGCAGC               TTTTTTTATTTTGAA 100 31
        yrzK 2551112 .. 2551149 - -20.1  -5.79588   TGAAAATGAAAAAAA   CTCCCGCCCCTACTATA CACT TATAGTAGGGACGAGAG    TTATACCCGTGGTGC 100 299
HC660_RS13380 NONE
        aspS 2547948 .. 2547969 -  -5.3  -2.99834   AAATCATATCACAGA           CGATT-TTGA TTT TCAAGAATCG           AACTGCACATTTAGT  53 36
        ssrS 2547687 .. 2547705 -  -8.9  -2.97475   TTTCCTATGATAAAT             GGCTGTT ACACA AACAGCC             GTTTTTTCTGCGCAT  69 47
HC660_RS13365 2546842 .. 2546866 -   -13  -6.17669   AAGAAAATAAAAAAA          CAGCCTTGAA TATGC TTCAAGGCTG          TTTTTTATTCCATTA 100 38
        cymR NONE
HC660_RS13350 NONE
        mnmA 2542617 .. 2542635 -  -6.7  -5.14563   CCTTTCATTAAAAAA             CCCCAAC TCGCT GTTGAGG             TTTTTTTCATTTTAT  83 37
HC660_RS13340 NONE
HC660_RS13335 2539496 .. 2539515 - -11.4  -4.86621   ACCCCCAATGAAAAA            GCTCCCGC AAAC ACGGGAGC             CCCTTTTACAGCTGT 100 31
HC660_RS13330 NONE
HC660_RS13325 NONE
HC660_RS13320 2538551 .. 2538572 - -11.7  -4.96848   TGGCTTATATAAAAA           GGATACTCT AAAG AGAGTATCC            TTCTTTCCTTAAAAC 100 34
HC660_RS13315 2537123 .. 2537166 - -11.9  -5.22312   AGTGACAGCAAAAAA GCCCTC-CCCCTATGCAAAC CACAC GTTTACACAGGGACGAGAGC TGTCTCGCGGTACCA 100 264
        alaS 2534444 .. 2534454 -  -3.2  -3.36216   GGCAAATTATAAAAC                 GGAT TTC ACCC                 AATCTTCTACAGAAG  48 6
HC660_RS13305 NONE
        ruvX NONE
HC660_RS13295 2533326 .. 2533348 -   -12  -5.73339   ATAAGCAGAAAAAAA           GCCGGAGC AGTATAG GCTCCGGC           TTTTGCGCGGTTTTA 100 38
        mltG 2532132 .. 2532149 - -11.3   -4.6971   GAAATGCGAATAAAA             GGAGAGC TTTT GCTCTCC              TTTTATTTCTGATTT  91 28
HC660_RS13285 NONE
HC660_RS13280 NONE
HC660_RS13275 NONE
         udk 2528412 .. 2528434 -  -8.5  -3.83324   TTATAAACAGGGAAA           GAAGGGAAT TTTAC ATCCCCTTC           CTGCCTATACATAAT  75 74
        greA 2527715 .. 2527741 - -15.2  -5.61596   ATCTTCATAAAAAAA         CACCTCACCCAC ATT GTGGACGAGGTG         TTTCTTTGTTAAACG 100 45
HC660_RS13260 NONE
HC660_RS13255 2525146 .. 2525176 - -21.4  -4.11394   AGCTGAGGTGTAAAA       CAAAAGCAGCCGAA AGA TTCGGCTGCTTTTG       TTTATTTTAATTTTT 100 27
HC660_RS13245 NONE
        mtnN 2523368 .. 2523385 -  -9.1  -3.31232   TGTTTTAGAGAAAAC             GGAGGAG AACA CTCCCCC              CGTTTTAATGAATTC  72 30
HC660_RS13235 NONE
HC660_RS13230 2521186 .. 2521237 -  -2.6   -3.7511   TTCTTCATAAGAGAA TCACCTGCCAGATTCATAGTATA CGACTAT TATAATAT-AATCTGGCAGCTTA CAGAGAAAGTAAATC  51 51
HC660_RS13225 2520923 .. 2520942 - -12.2  -5.70522   AAGAATAACAAAAAA            CAGCCATC AGTT GATGGCTG             TTTTTTTACTCGTCG 100 31
HC660_RS13210 2516582 .. 2516627 - -12.1  -5.61689   AAAAGCAACAAAAAA GGCAGCACTCAAATAACCTG TATCACT CAGGTG-TTTGAATGCTGCC TAACTTGTTGCATAC 100 183
HC660_RS13205 2515400 .. 2515439 - -12.2  -5.36441   CGGGCACATAAAAAA  CCGCAGACAAAAGAAGAC ACCC ATCCTCTACTGCCTGCGG   GGAGTTGCGTATGTC 100 307
HC660_RS13200 NONE
HC660_RS13195 2514819 .. 2514843 - -15.9  -5.00616   TTTTCCCGCAAAAAA          GGCAGAAAACA AAA TGTTTTCTGCC          CGCTTTTTAATGCCA 100 32
HC660_RS13190 2514098 .. 2514109 -    -3  -2.88758   AGAAGTCTGGATATA                TTTC CCGA GAAA                 TTTTTTATTTAACAG  42 30
HC660_RS13185 NONE
HC660_RS13180 2510089 .. 2510108 - -13.6  -3.53745   CACATGCTAAAGCAA            TCCCGCCA TCTC TGGCGGGA             TTTATTTTTACCTAC 100 37
HC660_RS13150 2503540 .. 2503564 - -10.1  -5.77632   AAAATCACAAAAAAA          GACAAGGGA GTTATGA TCCCTTGTC          TTTTTTTGTACTTCG 100 266
HC660_RS13140 2498611 .. 2498651 - -15.2  -4.96848   TTGTGGATACAAAAA TAAACCTGTATTAAAATGG CGTT CCATTT-AATACAGGTTTA  CGTAAAAAAACCGCT 100 42
HC660_RS13135 NONE
HC660_RS13130 NONE
        levF NONE
        levG NONE
HC660_RS13115 2493592 .. 2493616 - -11.5  -4.40333   TTGAAATAACACAAA          GGCACAGAC GGTTTGA GTCTGTGCC          TTTTTTATAGAGAAG 100 100
HC660_RS13100 2490883 .. 2490900 -  -2.7  -4.23707   ATAAATGTTAACAAA             GAAGGAA TTGT TTCATTC              ATTCTAGCCTTACTT  58 45
HC660_RS13095 2490202 .. 2490220 -  -8.8  -2.83915   CTCGTATAAAAAAGG             GGGACTTG GAG CGAGTCCC             TGAAAATGAAAGAGT  68 53
HC660_RS13085 2488622 .. 2488638 -  -5.1  -5.94214   AACATAATAAAAAAA              CCGCTCT TAA AAAACGG              TTTTAGAGTATAGGA 100 52
HC660_RS13080 2487457 .. 2487471 -  -2.8  -3.82531   AAATAATGCATGAAA               GATATG TCA CACACC               AATTAAAAGCTTGAC  51 40
HC660_RS13075 NONE
HC660_RS13070 2486407 .. 2486429 - -10.7  -4.93316   TAATAATAGCAAAAA           CCATACCAA TATTG TTGGTATGG           TTTCTCTTGAAGAGA  93 63
HC660_RS13060 2485149 .. 2485171 - -13.5  -5.10077   AAAGAGGGCAAAAAA           GCTGCTGAC GAGGA GTCAGCAGC           TAACACAGGAGGTAT 100 146
HC660_RS13055 2484764 .. 2484774 -  -6.8  -3.71284   CTGTTATCAATAGAA                 CGGT TGC ACCG                 TTAACTGCTTTCAAC  67 81
HC660_RS13015 NONE
HC660_RS13010 NONE
HC660_RS13005 2475509 .. 2475519 -  -6.8  -3.31983   CATATATTACAGGAA                 GCTG ACC CAGC                 ATTTATTTAATCAAT  61 215
HC660_RS13000 2475236 .. 2475254 -  -2.5  -5.22039   TTCAAAGGGAAAAAA             CTATAAA GTTCT TTTACAG             CACGAAAGAGATACA  76 121
HC660_RS12980 2471073 .. 2471097 -  -5.8  -5.29445   GTCGAATAAGAAAAA         GTGA-TCTCCC TTAA GGAAGAATCAC          TTCCTCTAATTGAAC  84 264
HC660_RS12950 2467140 .. 2467157 -  -5.7  -4.41348   GTTGGTTTAAAGAAA             TATTTAG TTTG CTAAATA              ATTTCAGTTTGGCTT  69 127
HC660_RS12945 2466028 .. 2466039 -  -2.2  -5.14965   ATGGTGAGCAAAAAA                CACC CTCT AGTG                 TTTGAACTCGCCAAA  69 114
        fumC 2462878 .. 2462899 -  -8.1  -4.99435   TTGAATAAGGAAAAA           CTAGTTACT GATT AGCAACTAG            TTTTTATCTTAAAAG  90 43
HC660_RS12925 2461442 .. 2461454 -  -4.8  -2.61004   TTAGGCGTAAAAATG                CGAC TTACT GTCG                GGAAGCTGGTACAGG  49 17
HC660_RS12920 NONE
HC660_RS12895 2457903 .. 2457935 -  -5.8  -5.42975   TTACACAAATAAAAA     TTCGTCAACCT-TAA AGGA TTATAGGTTGATGAA      TTTTTTATCGACTCT  85 30
HC660_RS12890 NONE
HC660_RS12885 NONE
HC660_RS12880 NONE
HC660_RS12875 NONE
HC660_RS12870 NONE
HC660_RS12865 2454374 .. 2454397 -  -3.9  -4.54727   TTTTTCAAAGGAAAA          GGGTATC TTTTTTATTC GATACCC           TTTCACAGTGATTAG  66 37
HC660_RS12860 2453562 .. 2453575 -  -3.9  -3.37761   CCTTAAGAAAGTCAA               TCTAT TTTC ATAGA                ATATCTAACCAAATT  49 19
HC660_RS12830 2449076 .. 2449095 - -12.2  -4.37502   AGGATCATAGCAAAA            GAGGCTCA GTAT TGAGCCTC             TTCTTTTATTACTGA 100 34
         gnd 2447122 .. 2447148 -    -8   -5.4477   AAAGTGTCAAAAAAA         TAAGGGCGGC CCGCTTT GCCCCCCTTA         CTTTTTTTCTGTTGC 100 23
HC660_RS12810 2445508 .. 2445531 -  -8.9  -3.65224   AGTTGATTGCAATAA          CCTGCTTCC GCCAGA GGAAACAGG           CTACTGATTACCTCT  74 45
HC660_RS12805 2444330 .. 2444347 -  -7.7  -5.14563   GTTTTCAGCAAAAAA             CACCCCT AAAA AGAGGTG              TTTTCAGGGCTGGAT  89 254
HC660_RS12795 NONE
        yqeH NONE
HC660_RS12785 NONE
        yhbY NONE
HC660_RS12775 NONE
HC660_RS12770 NONE
        rsfS 2439456 .. 2439469 -  -2.4  -2.90615   AGCCTTGGTAAATCA               TTGG TTCATT CCAA                GTTCCAGGTCTGCGA  42 9
HC660_RS12760 2438705 .. 2438726 -  -9.5    -4.652   AAAGCATTTTAAAAA           CCATCGTCT TAGT AAACGATGG            TTTTTGATTTCTGTG  88 12
HC660_RS12750 NONE
HC660_RS12745 2436471 .. 2436487 -  -8.7  -2.79248   CCAAAGGCAATAGTA              GACGCGA ATG TCGCATC              AATCACACATAACTC  68 28
HC660_RS12740 2434003 .. 2434017 -  -2.8  -5.42259   TGATTTTGAAAAAAA               CGTTCA AAG CAAACG               AAATGATGCTGTAGA  79 164
HC660_RS12730 NONE
        holA 2432704 .. 2432725 - -13.1  -5.54907   TGCATAAAACAAAAA           CGATCCTCA TAAT TGAGGATCG            TTTTTTTCATTTCTT 100 10
         gpr NONE
HC660_RS12710 NONE
HC660_RS12705 2429444 .. 2429464 -  -6.9  -4.25859   TTCAATGTAAAACAA            GAAAGAGAA AAG TTCCCTCTC            ATACTGGGGCTGCTT  76 56
        lepA 2427497 .. 2427517 - -12.6  -4.32678   TCTTTAAAGAAAGAA            GCCGCAGT ACAGG ACTGCGGC            GGCTTCTATTATTTT 100 34
HC660_RS12695 NONE
        hrcA 2425176 .. 2425196 -  -8.3  -2.78738   TCAAAAGTGTAAGGA            GAAGGGC GGGTGAT GCCCTTC            GATAAAATTTGCCAA  66 48
        grpE NONE
        dnaK 2422619 .. 2422647 - -10.4   -5.7946   CGGGCAAGAAAAAAA        GTCAAAGCCAAG AGATG CCTGACTTTGAC        TTTCTAACCATTGAA 100 102
        dnaJ 2421404 .. 2421417 -  -2.3  -2.72459   CATCCAATAATTAAT               CGCCT TTAA ACGCG                CGTTTTACCTTATCA  40 7
        prmA NONE
HC660_RS12665 NONE
        mtaB 2418259 .. 2418280 -  -8.7  -5.48063   ACTGAACATAAAAAA           CCGGCACAT TTAA ATGCACCGG            TTTTTTCAGGTTAAG 100 36
        rpsU NONE
HC660_RS12645 2416478 .. 2416500 - -11.4  -5.96219   TATGTATAAAAAAAA           GACATCTCTC TTA GAAAGATGTC           CTTTTCTTCGCCATT 100 40
HC660_RS12640 NONE
        floA NONE
HC660_RS12630 2413552 .. 2413593 - -13.9  -4.96848   TGCCCCATACAAAAA GAACCCCCTTTCATCTCAT ATGT ATGATTTGAAAGAGGGTTC  TAACACTTAATTTTT 100 32
        yqfC NONE
        yqfD NONE
HC660_RS12615 2411059 .. 2411084 -  -9.1  -4.93365   GCTGATAAGCAAAAA         TGACCCGAT AACGCGCG ATCGGGTCA          TTCAGGATTAATTTT  91 33
        pgpH NONE
        ybeY NONE
HC660_RS12600 NONE
HC660_RS12595 NONE
HC660_RS12590 NONE
HC660_RS12585 NONE
        recO 2405308 .. 2405350 - -17.9  -5.30155   GCAGCAACCAAAAAA CTCCCGTCTCTATGCTTGC CAGCC GCAAACATAGGGACGAGAG TTCTCCCGCGGTTCC 100 226
        glyQ NONE
        glyS 2402297 .. 2402324 -  -4.1  -4.17089   TTCAAATGGGGAAAA        GACGATTACCG ATCACA CAGCAACCGCC         TTTTCTCTCTTTATT  59 36
        ccpN NONE
HC660_RS12560 2400703 .. 2400723 -  -4.7  -4.81249   TGGCAAAGTCAAAAA            CCCAGGA TAGAGCG TCCTGAG            TTACATGTTTTTCGT  72 26
HC660_RS12555 NONE
HC660_RS12550 NONE
        rpoD 2396789 .. 2396811 - -12.8  -4.61482   CTTTTTAAAAAAGAA           GAACGGATCT GCA AGACCCGTTC           CATCTTATTCTAGAA 100 30
        cccA 2396071 .. 2396095 -  -9.9   -5.3658   AGGACAAAAATAAAA          GGCTGTCGAGA ACA TCTCGGCGGCC          TGAGAACGTATAAGG 100 56
HC660_RS12535 NONE
HC660_RS12530 2394076 .. 2394096 -    -9  -5.38497   AGTGAAAGCAAAAAA            CTGAGGCC CTCAC AGCCTCAG            TTTTTTTATAGAAAA 100 31
        cshB NONE
HC660_RS12510 2389891 .. 2389911 - -16.9  -5.47399   TCAAGCTGAAAAAAA            GCGGGGGAT TCA ATCCCCCGC            TTTTTTATTGCTGTA 100 30
HC660_RS12500 2388546 .. 2388580 -    -8  -4.93696   CTTAAATATCAAAAA    GAAAATGGC-AGCTG TCTGAC CAGCAAGCCATTTTC     TTAACTACTGATAAA  86 77
HC660_RS12495 2388014 .. 2388031 - -11.3  -5.54079   TGAAAAATTAAAAAA             GGAGCCT GATT AGGCTCC              TTTTTCTCTATCCTT 100 47
HC660_RS12485 2386868 .. 2386904 - -16.2  -4.42206   AATTAAATGAAGAAA   CACAAAAAGCTTGACGG GAAC CCGTCAAGCTTTTT-TG    TATTAGAAAAATGGA 100 28
HC660_RS12465 2383715 .. 2383731 -  -4.4  -2.80354   TATATGTACTGAAAT             GC-CGCT TTAC AGCGAGC              CTTTCTTCATTCAAT  48 153
HC660_RS12460 2383039 .. 2383062 -  -8.9  -5.80248   GAAGACATAAAAAAA          CAAGGCCCT TTTATG AGGACCTTG           TTTTGCGTTATTATT 100 36
HC660_RS12455 2381592 .. 2381611 -  -5.7  -5.05113   TTTACAGAAAGAAAA            GACACTC AAGTAA GAGTGCC             ATTTTTCATTTTAAA  78 87
HC660_RS12450 2379384 .. 2379402 -   -11  -5.60993   TTTTGTATAAAAAAA             CGCCCACA TGA TGTGGACG             TTTCTGTTTAGTTAG 100 33
HC660_RS12445 2378322 .. 2378333 -  -5.8  -4.06384   TGTTAAGAGGAGAAA                CGGA AGTC TCCG                 CACTCCTCTTTTTAT  68 46
        pstC NONE
        pstA NONE
HC660_RS12430 NONE
HC660_RS12425 2374823 .. 2374842 -  -8.6  -5.70829   AACACGATAAAAAAA            CAGGCTAT GTTA ACAGCCTG             TTTTTTTTATCCGAA 100 32
HC660_RS12410 NONE
HC660_RS12405 2372239 .. 2372250 -  -2.2  -3.37912   GACTTATATATAATA                CCAC TATA ATGG                 ACGGAATGCTAGGAT  45 55
        rpmG 2371981 .. 2372006 - -10.5  -5.47159   TCGGAATAGAAAAAA         GCCAGAACCTT TTTC AAAGCTCTGGC          TTTTTTCTTACACCT 100 56
HC660_RS12395 NONE
HC660_RS12390 2371136 .. 2371151 -    -9  -5.48054   ACTAAAAGCAAAAAA              TCCCGT GAAA ACGGGA               TTTTTAAAAAGCTTG 100 29
HC660_RS12385 NONE
HC660_RS12380 NONE
HC660_RS12375 2368174 .. 2368184 -  -2.6  -3.94333   CATTAACACATCAAA                 TTAA ATC TTAA                 CCTGAACATAACAAA  53 64
HC660_RS12370 2366155 .. 2366182 -  -5.5  -5.04249   TTTTTAAAAAAGAAA        GCCTCCCGCGT TTTTTG ATACGGGAGAC         TTTATGATCATGAAG  78 33
HC660_RS12365 2364901 .. 2364913 -  -6.3  -4.59982   GCAGAATCAAACAAA                CTGAT CTC ATCAG                CCTCCCCCTCCGATC  74 90
HC660_RS12360 NONE
HC660_RS12355 2363504 .. 2363525 - -13.1  -4.35116   TACTGCACATTAAAA           CCTGTATCC AGTG GGATACAGG            TTTATTTTTTATTGC 100 34
HC660_RS12345 2362506 .. 2362530 -   -13  -4.82855   CATTAAATGCAAAAA          GAGACAAACC TCATC GGTTTGTCTC          TTTTTCTATAATGAA 100 31
        mgsR 2361591 .. 2361630 -   -13  -4.62471   CTGAACCGTGAAAAA  CCGAAGATAAGCTGATTC AAGC AAATCAGCGGATCTTCGG   TTTTTCATCATGCAG 100 33
HC660_RS12325 2360476 .. 2360509 - -11.8  -4.88407   TTATCGAAGTAAAAA     CAGCTGAATAGCCC TAGCAC AGGCTGTTCAGCTG      TTGCTTCTCTTGCGT 100 82
HC660_RS12315 2357597 .. 2357618 - -10.9  -5.58522   TATACAAAATAAAAA           GGAAGAGGC AGCT ACCTCTTCC            CGACTGTTTGTTATG 100 470
       comGA NONE
HC660_RS12300 NONE
HC660_RS12295 NONE
HC660_RS12290 NONE
HC660_RS12285 NONE
HC660_RS12280 NONE
HC660_RS12275 2353326 .. 2353339 -  -2.4  -3.22298   TTCAGTTATTATGAA               GTGT TGGCTC ACAC                GACTTTTTTTATACA  45 53
HC660_RS12270 2352886 .. 2352907 -  -2.9  -6.00814   AAGAAGCAAAAAAAA           GGTACCCGC TCGC ACAGGTACT            GGTTAAACAAAAAGT 100 234
        tapA NONE
HC660_RS12255 2351131 .. 2351142 -  -5.8  -3.70417   ATTATATTATCGAAA                CCTG TTGC CAGG                 TTTACAACTGATGTT  62 39
        tasA 2350267 .. 2350292 - -16.3  -3.56056   AATGAACATAAGGAA         TGGCTCAGTAC GCAT GTACTGAGCCA          CCTCTTTTTTCTATT 100 39
        gcvT NONE
HC660_RS12220 NONE
HC660_RS12215 2342584 .. 2342639 - -16.6  -4.32046   GGCGGAAAAATTAAA GCTAAAAATTAAAAAACAGCTGTCTG ATAT CAGACAGCTGTTTTTTAATTTACAAG TTCACTGCTTACGTT 100 14
        lipM 2341149 .. 2341162 -  -2.4  -3.43071   GTTTACACTAATGAA               CTTG AAAAAA CAAG                GATGCTCTGCAGGCC  46 53
        mntR 2340635 .. 2340657 -  -7.7  -5.52986   ATTTCATCAAAAAAA          GGC-GGCCTC CTTT GAGACCCGCC           TTTTTACTGATTATG 100 29
HC660_RS12195 2339598 .. 2339613 -  -2.5   -5.7946   TTCTCAAGAAAAAAA              GCCAG ACGCAG CTGAC               TGTCATAGAAGGGAA  93 71
HC660_RS12180 2337463 .. 2337481 -  -7.5  -5.08824   TTCTCATGTAAAAAA             TGTTCAC TTCTC GTGAACA             TTTTATCATAACAGA  89 54
        aroQ NONE
        papA 2335921 .. 2335940 -  -2.2  -2.74563   CCTATATTCCAATCA            CAAAATAA TGAG TTCTTTTG             GGGAATGGGTAATTG  41 3
         efp 2335299 .. 2335322 - -14.6  -5.60993   TTGCGTACAAAAAAA          GCCTGCTCCC AATT GGGAACAGGC           CTCTTTTTTCTCCTT 100 39
HC660_RS12160 NONE
    spoIIIAA NONE
HC660_RS12150 NONE
    spoIIIAC NONE
    spoIIIAD 2332728 .. 2332752 -  -2.1  -2.72013   ACCGCAAGAACCAAC          GCCCATTGAAA ACG CTTCAATCTGC          CGCCTCCTTTCGGTT  40 39
    spoIIIAE NONE
    spoIIIAF NONE
    spoIIIAG NONE
    spoIIIAH 2329550 .. 2329567 -  -9.8  -4.66163   ACTGGCATGCAAAAA             GCCCGC GTTTCG GCGGGC              GGTTGTTCATTAACT  89 39
        accB NONE
        accC NONE
        yqhY 2327130 .. 2327152 -    -7  -5.43866   TAACGTGTAAAAAAA           CCAAAGGG CCGCCCT CCCCTTGG           TTTCCTGTTAAGCCA  91 43
        nusB NONE
        folD 2325574 .. 2325585 -  -2.2  -2.70932   GCCCTGGCTTAAGGA                GCCT GAAG AAGC                 GGGTATCGTGCTCAT  40 87
HC660_RS12090 NONE
HC660_RS12085 NONE
HC660_RS12080 2322846 .. 2322860 -  -6.4  -4.42386   CCTGTATTGATAAAA               GATCCA AAG CGGATC               AACTCACTTTCAGCA  75 196
HC660_RS12075 NONE
HC660_RS12070 2320092 .. 2320115 - -11.2  -5.31456   TGAATGCAGAAAAAA          GGAATAATAG CGCC CTATTATTCC           GGTACATCTGCTTTT 100 19
        argR 2319571 .. 2319581 -  -6.8  -2.62263   ATTTCCTTTACAGCA                 GCTC TAG GAGC                 CTGCTTTTTACGCCG  56 7
        recN 2317590 .. 2317613 -   -11   -6.0427   AGTATACAAAAAAAA          TAAGCTGCGC ATAT GCGCAGCTTT           AGACTGTTGACAAAA 100 209
      spoIVB 2316141 .. 2316158 - -12.7  -5.81622   AGAAAAGCAAAAAAA             CTGCCGG AATT CCGGCAG              TTAGCTTGCTTTTTC 100 26
       spo0A 2315011 .. 2315050 -  -8.8   -5.2853   TATCCAAAAATAAAA  CGCCTCCTATTTATCAGT GGAA ACCAATAAATAAAAGACG   TTTGATTTAAGTGCT 100 55
HC660_RS12045 2314560 .. 2314577 -  -9.9  -5.60993   TTTTTTATAAAAAAA             GACCCTT AGGA AAGGGTC              CTTTTCGTTAATCGA 100 200
HC660_RS12030 NONE
HC660_RS12025 NONE
HC660_RS12020 2311049 .. 2311070 - -14.5  -4.93547   TGAATGAATGAAAAA           GAAGGCTGC ACCG GCAGCCTTC            TTGAAAACTAATTTG 100 33
HC660_RS12015 2309782 .. 2309792 -  -3.2   -3.3482   CAATGTTTTAATGAA                 CTCG AAC CAAG                 ACAGCGTCTCCCTGA  48 7
HC660_RS12010 NONE
HC660_RS12005 NONE
        mmgD NONE
HC660_RS11995 NONE
        prpB 2304172 .. 2304189 - -12.7  -5.19916   AAAAGATGTAAAAAA             GCCGGAG CGCG CTCCGGC              TTTTTTGTTCGCACT 100 39
HC660_RS11980 NONE
        yqiS NONE
HC660_RS11970 NONE
HC660_RS11965 NONE
        lpdA 2297027 .. 2297037 -  -6.8  -3.80855   GCTTTTAAAAATGAA                 TGGC TTT GCCA                 TCTGCAGCAAGCGCT  67 4
      bfmBAA NONE
HC660_RS11950 NONE
HC660_RS11945 2293672 .. 2293706 -   -16  -5.03994   TGGTACATAGAAAAA     GAGCATTTTTTGAAGG TAT CGTTCAAAAAATGCTC     TTTCTGTTTGTTTAG 100 37
        brxB 2289934 .. 2289957 -  -4.5  -5.64274   TTATGCACAAAAAAA          CCCCG-TGCC ACTCG GGCATCCGGG          GTTTTATCTTATACT  84 34
        artP 2288903 .. 2288924 - -10.2  -5.10461   CCTATTCAATAAAAA           GGCTCAAC GAAAAA GTTGAGCC            GCTTTTTTTACTTCT  93 33
        artQ NONE
        artR 2287443 .. 2287463 -  -5.5   -5.4505   TTCTTCAACAAAAAA            GAAGAAG CACAAGC CTTCTTC            TTTTTCCCTATATTC  83 40
HC660_RS11905 NONE
HC660_RS11900 2285720 .. 2285732 -  -2.7  -4.04187   CACGATAAAATATAA                TCAGA TTG TCTAA                GGAGTGAAACCATGT  55 149
         mce NONE
HC660_RS11885 2283722 .. 2283734 -  -7.7  -2.74144   CCTCCATGTTTAAAG                CGGTA TGT TACCG                TGCTTTTTTTTCGGT  62 7
HC660_RS11880 2282546 .. 2282570 -  -9.3  -5.14965   ACTGTTAGGAAAAAA          CCCGAATGC CAGATCC GCACTCGGG          TTTTTCTTCATTATT  91 36
HC660_RS11860 2279145 .. 2279155 -  -2.6  -4.17023   TTAACCATTTTAAAA                 TTTA CAT TAAA                 ATAAAATGATATTTA  55 84
        gndA 2277659 .. 2277682 - -10.3  -5.44119   TCTATTTCAAAAAAA          TCCCGCAGC TGTCAG GCTACGGGA           TTTTTCACATTATTA 100 38
HC660_RS11850 2276924 .. 2276954 - -15.6   -5.4433   ATATATAAAGAAAAA       GGCTGAAAGTGCTT ATA AAGCATTTTCAGCC       TTTTATTGATGTATT 100 20
HC660_RS11840 2274246 .. 2274258 -  -6.3  -2.91593   CATCTCCTTATAAAG                CGTAA TGA TTACG                TTTTATTATACAGCT  56 66
        rpmG 2274042 .. 2274074 - -14.3  -3.93556   AGGCAGTCAATTAAA      CAAAAAACCCGGCTA AAG CAGCCGGGTCTTTTA      TTACTTTGTTTCGCG 100 26
HC660_RS11820 2270106 .. 2270120 -  -7.8  -4.24002   CGCCAAAGCGGAAAA               CAGCCG GCG CAGCTG               TGCAAGGAGATTACG  76 237
HC660_RS11810 NONE
HC660_RS11805 2267255 .. 2267293 -  -5.3  -5.24129   TCTCTTTATAAAAAA  CTGCCTGCA-AACACACC AAAA GGCGTCTCACACAGGCAG   TTCCATGCTTATTTT  81 34
        dsdA 2265808 .. 2265827 -  -4.4  -4.42806   GTAGCTTTAAACAAA            CGCTTACAA AGA TTGTAA-CG            GAAAACATTCCTACT  66 55
        coaA NONE
HC660_RS11790 2264221 .. 2264243 - -14.2  -3.56921   TTTAACACAAGAAGA           CGGGAGAGAA TCG CTCTCTCCCG           CAAAAACGAGGTGAT 100 204
HC660_RS11770 NONE
HC660_RS11765 2260379 .. 2260391 -  -3.5  -3.28712   TCTTTTTTCTCACAA                TATAA AAA TTATA                TTTTGCCTGACTGGA  48 150
HC660_RS11760 NONE
HC660_RS11755 NONE
HC660_RS11750 2258485 .. 2258495 -  -2.4  -3.33737   CATGAATGTTCATAA                 GGTG AAA CCCC                 CGTTTTTTTCATTTT  45 9
HC660_RS11745 NONE
HC660_RS11740 2257876 .. 2257898 - -14.2  -4.85195   AAAATAACGTAAAAA           GCGAAAGGCC CCT AGCCTTTCGC           TTTTCCATCATAAAA 100 33
HC660_RS11730 2256548 .. 2256569 - -11.6  -4.99043   CGTCCATAAAGAAAA           CCAGCACC TGACCG GGTGCTGG            TTTATTTGTATTGAT 100 27
HC660_RS11715 NONE
HC660_RS11710 2253493 .. 2253504 -  -5.8  -4.61873   CCGCACAAAGCAAAA                GGAG ACTG CTCC                 TCAGACCATTGAATT  74 166
        ansA NONE
        aspA 2250594 .. 2250631 - -11.5  -3.54424   CCCTATGCTTGTAAA   CAGCTTATTCACCCG GCTATTCA CAGATGAATAAGCTG    CATTTTGTTTAAATT  85 41
        mleN NONE
HC660_RS11685 2247730 .. 2247753 - -12.5  -5.41746   AATGTTTTAAAAAAA          CAGCACCTG TCGTGC CAGGTGCTG           TTTCATTTTAATGTT 100 33
HC660_RS11680 2247398 .. 2247416 -  -3.2  -2.57069   TGTATGAAAGAAACG             GAAAAACA TGC TCTTTTTC             AAAAAGAAACGATAG  43 47
      spoIIM NONE
         fur 2246096 .. 2246116 -  -8.3  -5.32699   CGAAACAGCAAAAAA            CCCTTTCCC CAA GAGAAAAGG            TTCGAGCCCGGCATC 100 43
HC660_RS11665 NONE
        xerD 2244867 .. 2244884 - -12.7  -5.63517   GTCCTAAAGAAAAAA             GCCGCAG CCCG CTGCGGC              TAGGCGCGCGGATGG 100 25
        deoB NONE
HC660_RS11650 2242659 .. 2242683 -   -13  -6.02914   TCGACATAAAAAAAA          CAGCTGTTTC AATTA GAAACAGCTG          TCTTCTTATCTTTTC 100 53
HC660_RS11645 NONE
     spoIIAA NONE
     spoIIAB 2240506 .. 2240517 -    -3   -2.7186   AAATCTCCTTAATTA                CAAA GCGC TTTG                 CTTTTTGATAAGTGC  41 7
        sigF 2239701 .. 2239724 -  -7.4  -5.45802   TTCGCAAAACAAAAA          GCCAGCCTGC AGTG ACAGACTAGC           TTTCCGTATGATCCA  91 21
      spoVAA NONE
      spoVAB 2238552 .. 2238565 -  -2.3  -3.70902   TTTGTCATATTGAAA               CCTCC TTAT GGATG                ATGAATAAAATACAG  50 17
      spoVAC NONE
      spoVAD 2237069 .. 2237081 -  -3.4  -3.09505   ATAGTCCACTTAAGA                TGCA CCTCC TGCA                CGTTCAAATACAACC  46 7
      spoVAE NONE
     spoVAEA NONE
      spoVAF 2234583 .. 2234603 -  -6.9  -4.09685   GCTTATGGGTGAAAA            GGACAGT TTTATGG ACTGTCC            TTTCATAATTAAGAC  73 77
        lysA 2233206 .. 2233223 - -10.5  -5.96894   ATTCAAATAAAAAAA             GCGCCGA ATTT CCGGCGC              TTTTTTTATTGCTTC 100 31
HC660_RS11580 2231603 .. 2231622 -  -6.4  -5.49568   AAGCGAAAAGAAAAA            GCTCCCTCA TAT CG-GGGAGC            TTGCTGTCTGCCTAT  89 40
HC660_RS11575 2230968 .. 2230978 -  -3.2  -4.35604   CGAATCGATAAGAAA                 TCCC ATT AGGA                 CCATTGAAGCGAATT  60 112
        lepB 2230326 .. 2230348 -  -7.1  -5.80727   AAAAAGAATAAAAAA          GCAG-TTCCT TTTC AGGAAACTGC           TTATACTTAGTTGGT 100 32
HC660_RS11565 2229417 .. 2229443 - -15.3  -5.03314   TTTACCGTCAAAAAA         GCCCCGAATTT AAGAA AAATTCGGGGC         TTTAGGTATTTTACG 100 355
        ribD NONE
        ribE NONE
HC660_RS11550 NONE
        ribH NONE
        ribT 2225417 .. 2225440 - -16.8  -6.11243   AGCGAAGAAAAAAAA          GCAGAGGCTG ATAA CAGCCTCTGC           TTAATTATTGTATGA 100 26
        scpA NONE
        scpB NONE
HC660_RS11515 2222549 .. 2222567 -  -6.7  -5.88197   GCAAACATAAAAAAA             CTCTCCC GTAAA AGGAGAG             TAAGTGTTATCTGAT 100 32
HC660_RS11510 NONE
        spmA NONE
        spmB 2220178 .. 2220192 -  -4.2  -5.47218   CTTTATCTAAAAAAA               CGCC ATTTTCA GGCG               CTCCCAAATAATAAC  81 19
        rluB NONE
        resA NONE
        resB NONE
        ccsB NONE
        resD NONE
        resE 2213272 .. 2213293 - -11.6  -4.71828   ATTTTATTAAGAAAA           CACCCGCT TAGGTC AGCGGGTG            TTTCTTATGGAACAA 100 71
        sigX NONE
HC660_RS11460 2211510 .. 2211533 -  -6.8  -5.23316   TATTATATCAAAAAA          CAAAAAAGCC CAAA GGCTTTTTCA           GTTTAAAGAAATCGG  88 23
HC660_RS11455 2210622 .. 2210641 - -10.8  -5.32944   TCCATAATGAAAAAA            CTCAAGCT TTGC AGCTTGAG             TTTTTTTCTTTTAAC 100 36
        fmnP 2207941 .. 2207956 - -10.4  -4.77896   GAAGTAATCGAAAAA              GCTCCC CTGC GGGAGC               TTTTTTTATTTAATG  91 35
HC660_RS11435 NONE
HC660_RS11430 NONE
HC660_RS11425 NONE
HC660_RS11420 NONE
HC660_RS11415 NONE
HC660_RS11410 2202060 .. 2202079 -  -6.6  -4.04206   CTACTTGCACACAAA            TCATATAA CACA TTATATGA             GATGATGAGTCATAG  71 125
HC660_RS11405 2201410 .. 2201428 -  -6.7  -6.09888   TTTTAACAAAAAAAA             CCGCTGT AAAAA ACAGCAG             TTTTTCTTCCATTCT 100 40
        gudB 2199963 .. 2199984 -  -7.4  -5.95539   TTCCAAATAAAAAAA           TCTCCTAT TTTATC ATAGGAGA            TTTTTATTTTTTATG 100 53
        ypdA 2198895 .. 2198919 - -12.3  -5.86609   TTAAAAAAACAAAAA          GAGCATACGAA TCC TTCATATGCTC          TCCTCTTTTCACTGA 100 34
        prsW 2198126 .. 2198146 -  -9.7   -4.8143   TCAACAACTCAAAAA            GCCGCAC TATGGCT GTGCGGC            TTTTCTATATCTGCA  91 30
        sleB NONE
        ypeB 2195675 .. 2195697 - -11.4  -5.16572   ATGTAATGGAAAAAA           GGAAAAGACT TTT AGTCCTTTCC           TCCTAGTTTTTATAG 100 35
HC660_RS11375 NONE
HC660_RS11370 2194736 .. 2194746 -  -2.6  -3.64685   AAAATTCCTGAATAA                 TTAA TGT TTAA                 TGGTTTCTACCCAAT  49 15
HC660_RS11365 2193967 .. 2193977 -  -2.4  -5.63857   AAAAATTCAAAAAAA                 GTGG CCT CCGC                 TGGTATCAGCGGGAC  79 31
        rpsA NONE
HC660_RS11355 2191495 .. 2191519 - -10.1  -5.16133   ATCATAATACAAAAA          GCCCAAAAC TCACACG GTTTTGGGC          TTTCCTTATCCAACT  93 42
HC660_RS11345 NONE
HC660_RS11340 NONE
HC660_RS11335 2189532 .. 2189547 -    -9  -4.72007   TTTTATGAAAAGAAA              CCCTTC AGAG GAAGGG               CTTAACTCATTTATT  88 72
        engA NONE
HC660_RS11325 2186848 .. 2186876 - -11.9   -5.9218   GATAGAATAAAAAAA        CTGAAGCAAAG AGGGGGA CTTTGCTTCAG        TCAAGTTGACTATAT 100 224
HC660_RS11320 NONE
HC660_RS11315 2185745 .. 2185777 -  -9.3  -4.86902   TAAAGTATAAGAAAA      CCTTTCTCCCT ATTTGTATGCA AGGGAGAAAGG      TTCATTCCTTTTTTA  91 27
      spoIVA 2184086 .. 2184109 -  -5.4  -5.69793   AGAGCAAAGAAAAAA          GACCTC-CTAT TCT ATAAAGAGGTC          TTCCCGCATTACAGG  95 34
         hbs 2183387 .. 2183415 - -14.7   -5.0133   CACGCTCCTAAAAAA        TGAAAAGCCCCTT AAG AAGGGGCTTTTCT        GTGAAGAAATATAGT 100 79
        folE NONE
        mtrB 2182349 .. 2182360 -    -3  -3.57971   ACATTTATTTCTAAA                TCAT ATGT ATGA                 GTTTTATTTTGTCAT  49 138
HC660_RS11290 NONE
        menG NONE
        hepT 2179823 .. 2179833 -  -6.8  -3.49135   CAGATAATTAATCAA                 TCCG GGG CGGA                 GAAATTTCTTAATAT  63 51
         ndk 2179245 .. 2179279 - -10.9  -5.25803   AACCTTTACAAAAAA    GCCGAAACCAGCGATA TGGA TAT-GCCAGTTTCGGC     TTTTTCAGCAATGAT 100 40
        cheR 2178277 .. 2178290 -  -2.5  -3.21438   AACTACTATAACATA               TTTTT CGGT AAAAA                GTCAGTCTATCTTTT  44 32
        aroC NONE
HC660_RS11260 NONE
        aroH 2175437 .. 2175460 - -12.6  -4.76087   GATATAACAAATAAA          CCCAAAAGAA AGGC TTCTTTTGGG           TAGAATAAACATACA 100 147
HC660_RS11250 NONE
        trpD NONE
        trpC NONE
HC660_RS11235 NONE
        trpB NONE
HC660_RS11225 NONE
HC660_RS11220 2168333 .. 2168353 -  -9.8  -3.88498   TGTTCATAGACTAAA            GAGGTGAT ACTTG ATCACCTC            TTATAAAATTTCAGC  83 26
HC660_RS11215 NONE
        aroA 2165873 .. 2165902 - -14.5  -3.35349   AAACAACTCGCACAA       CAAATCCTGAAGC ATAA ACTTCAGGATTTG        TTTGAAAGCTTATTT 100 16
HC660_RS11205 NONE
HC660_RS11200 2163631 .. 2163652 - -10.2  -3.84406   TTTTTACGACAACAA           GCCTTGCA TTACGC TGCAAGGC            TGGTCATGTTATGTG  81 34
HC660_RS11195 2163059 .. 2163069 -    -4  -3.76174   AAACTGACTAAAATA                 GAAA ATA TTTC                 ATAACTCTAGACACC  55 112
HC660_RS11190 NONE
        qcrB NONE
HC660_RS11180 2160972 .. 2160988 -    -8  -5.36441   TGTCCATATAAAAAA              GCTGAC GCCTG GTCAGC              TTTTGATAATAAAAG 100 72
HC660_RS11175 NONE
        ypjB 2159444 .. 2159459 - -11.8  -4.46212   TTTTGGATGACAAAA              GGCGGC TGCC GCCGCC               CCTCTTACTCATTTT 100 34
HC660_RS11160 NONE
HC660_RS11155 NONE
        mgsA NONE
       bshB1 NONE
        bshA NONE
HC660_RS11135 NONE
HC660_RS11130 2152653 .. 2152672 -    -5  -5.16572   ATCCAAGCCAAAAAA            CCTTC-CGC TAC ACGAGAAGG            ATTCTTCACTTTCTA  76 187
        panB NONE
        panC NONE
        panD 2150488 .. 2150503 -  -7.5  -5.10163   AATCTTAAAAGAAAA              CCCCC GGTAAA GGGGG               CGGTATATCTACAAA  89 34
        dinG 2147574 .. 2147588 -  -8.5  -3.63627   CTCCCACACCGGAAA               GCCGC TTTAT GCGGC               TTTTATTCACTTTTC  73 28
HC660_RS11105 NONE
HC660_RS11100 NONE
        aspB 2145551 .. 2145569 -  -7.4  -5.00642   CAATGCAGATAAAAA             GCGGCT TTTTGTC AGCCGC             TTTCTGATCTGTTAG  83 37
        asnS 2144103 .. 2144120 -  -7.7  -4.62069   CCTTTACTGTAAAAA             GTCTCCC TTGC AGGAGAC              TCTTTTTTCTTGTTT  83 53
        dnaD NONE
         nth NONE
HC660_RS11075 2142164 .. 2142182 -  -8.8  -5.24129   TTTCTGCACAAAAAA             CCTCCCTT TTT AGGGGAGG             CTTTATCGTTTCATC 100 28
HC660_RS11060 2137700 .. 2137722 -   -15  -3.05384   CGTCCTTCTACGTAA           GAAGCAAGGA AAT TCCTTGCTTC           TTTTATTTCTTCAGC 100 28
HC660_RS11050 NONE
HC660_RS11045 2136722 .. 2136749 - -14.3  -5.18726   CCCCTATAATAAAAA        TGAAGACAGCC TTTATT GGCTGTCTTCA         CTTGCAATTTCATCC 100 10
HC660_RS11035 2135914 .. 2135945 -  -8.9  -5.00616   TTTCTTCCCAAAAAA      TAAGCATGAATGA TTTGAT TCATTCATGCTTC       TCTTATTTAAAAAAG  91 28
HC660_RS11025 2134846 .. 2134863 -  -9.1  -5.55769   TCGGACAACAAAAAA             GCAAGGC ATCC GCCCTGC              TTATTTCGCTTTTAT 100 26
HC660_RS11020 NONE
HC660_RS11015 2131207 .. 2131219 -  -2.7  -5.54894   AATCCAGCAAAAAAA                TTTCA TGG CGAAA                GAAGTCGTCTTTTGC  80 58
HC660_RS11010 NONE
        cotD 2130645 .. 2130665 -    -9  -5.00884   ACCTGCTTTAAAAAA           TGGGGCTCC CATT GG-GCCCCA            TTTGATGTGCTGCGT  91 71
HC660_RS11000 NONE
        gpsB 2129680 .. 2129699 -  -4.2  -3.35996   GATTGGGATTTACAA            GCGCCATT TATT ACTAGCGC             AGATCAATCATAAAG  52 29
        rnpB 2129201 .. 2129221 -  -8.3  -4.70583   CTCATCAAGATAAAA            GCTCTCC TTAGACG GGAGAGC            TTGATTTCATCATTT  87 59
HC660_RS10985 2127976 .. 2127997 - -13.1  -4.00532   GGCTGAAAGATGAAA           GAAGACGCT TCAG AGCGTCTTC            TTTTTATGCGTGTTC 100 29
HC660_RS10975 2127412 .. 2127426 -   -10  -5.94214   AATACAATAAAAAAA               CTTGGC AGT GCCAAG               CTTTTTGTGAATTAC 100 37
HC660_RS10970 2125377 .. 2125399 -   -15  -5.50723   TGACCAAAAGAAAAA           GCTGATGATC ATA GATCATCAGC           TTTTTCGCGATTACA 100 36
HC660_RS10955 NONE
HC660_RS10950 NONE
         eda NONE
        kdgT 2119850 .. 2119875 - -11.2  -4.37092   ATTGTTTGTATAAAA         GGCTGCCGGTC TAGTT GAC-GGCAGCC         TTCATCACTCAATTT  90 34
        ypwA 2117963 .. 2117996 -  -7.5  -6.19302   AGATAATAAAAAAAA     GCATTACCCGCTC AAAACAAA GAGCAAGCAATGC      TGAAATAACAAAAAA 100 295
         xpt NONE
        pbuX 2116015 .. 2116030 - -10.4   -5.1287   TTTATATGCAAAAAA              CTCCGC CGTA GCGGAG               TTTACACTGCTGTTT  93 27
HC660_RS10920 NONE
HC660_RS10915 NONE
        fbpC 2114130 .. 2114147 - -12.7  -5.53436   AGAGAACAGAAAAAA             GCTGCCG AAGA CGGCAGC              TTCTATAAAAGAAAA 100 70
HC660_RS10905 NONE
HC660_RS10900 2110040 .. 2110083 - -13.3   -4.1891   TCTGCCCAACATAAA TCCCCCCTTACGTCGGATAC ATATA GTATGCG-CGTAACGGGGGA TCTGCACTCGAGGCA 100 53
HC660_RS10895 2109850 .. 2109874 -  -9.4  -6.09196   GCGAAAATAAAAAAA          CAGCATCTCT TGTAT AGAGATACTG          TTTTGGATGGTTCAA 100 41
HC660_RS10890 2108886 .. 2108918 -  -7.1  -4.77629   AAAAGCAATACAAAA     CGCTAGAGGTGATC TTACAC GATCTC-TCTAGCG      TTCAGTTTTTCAAGC  81 7
HC660_RS10870 NONE
HC660_RS10865 2106667 .. 2106691 - -15.9  -4.67904   GATGAATTCCAAAAA          TAAAACCGCAG CTT CTGCGGTTTTA          TTTTTTAGTGCTTAG 100 30
HC660_RS10855 2106041 .. 2106060 - -13.6  -3.34646   AAGTTGACAAATAGA            GGAGAGGC AAAT GCCTCTCC             TATTTGATTTTCATT 100 25
HC660_RS10830 NONE
HC660_RS10825 2101765 .. 2101777 -  -4.7  -3.08992   ACTTATTCTAACATA                GTCGC CCC GCGCC                TTCTATTACGATGTT  52 31
HC660_RS10820 2100564 .. 2100580 -    -8  -5.01042   AATTCAAATTAAAAA              GGTGCA TGATC TGCACC              TTTCCTTCTTTTTTA  86 38
        ilvD 2098526 .. 2098575 -  -8.9  -5.38047   CATTGACATAAAAAA GCCCCCTCTA-AATATCCTTCA TCTGAAG TAAAGGATACTATAGAGAGAGC CGGATTTCAAATGTT 100 75
        brxA 2098067 .. 2098083 -  -9.4  -5.09259   TACTCCAAAAGAAAA              TGCCCG GTAAA CGGGCA              TTTAGCAGTGTGCAT  91 27
HC660_RS10805 2097243 .. 2097270 - -15.7  -3.97947   GTCACCGATTAGAAA        CAAGCCCGTGA GGTTCT TCACGGGCTTG         TTTCGCTTGCGATTT 100 15
HC660_RS10800 NONE
HC660_RS10795 2095800 .. 2095821 - -10.3  -5.64304   TAACACAATAAAAAA           TCATTTCTG AACC CAGAAATGA            TTTTTTTTATAGATT 100 39
HC660_RS10790 NONE
HC660_RS10785 NONE
HC660_RS10780 2093803 .. 2093823 - -12.6  -4.87291   TATCCTAATGAAAAA            GCGCAGTC TCAGT GACTGCGC            TTTTTTAGGCCCGTA 100 30
        ilvA NONE
HC660_RS10760 2090224 .. 2090280 - -12.6  -5.42862   ATACCCGCAAAAAAA TTCCTGCATG-CCCCTTCG-TACGCC TGCGCGC GGCATAGCAAAGGGGACACACAGGAA TAAACGGCGTATCAC 100 37
HC660_RS10755 NONE
HC660_RS10750 NONE
HC660_RS10745 NONE
        ypmT 2087907 .. 2087926 -  -5.8  -5.14965   AGCCGCATGAAAAAA            GAGACGATG CAG CAT-GTCTC            TTTTTTTCACGATTT  80 32
HC660_RS10735 2086479 .. 2086505 - -15.3  -5.51165   AAAACGGTAAAAAAA         GCACATACCCT CTATC AGGGTATGTGC         TTTTCGAAGCGCCTT 100 43
        msrA NONE
        msrB 2084895 .. 2084938 - -15.7  -5.76633   GCATATAGAAAAAAA GCATAAAACAAACCTGTCTA TCGAT TAGACAGGCTTGTTTT-TGC TTGCATTTTATTTGT 100 33
HC660_RS10710 2083182 .. 2083200 -  -8.8  -5.47159   CGTGAACATAAAAAA             GCAGCCGA AAA TAGGCTGC             TTTTTTAATCATCAG 100 30
HC660_RS10695 2081249 .. 2081269 - -10.4  -3.23018   GTCACACATGAAAAC            GGCTCCGC AGCAA GCAGAGCC            TCTGTCATCATTTAA  79 37
HC660_RS10690 NONE
HC660_RS10685 2079079 .. 2079093 -  -4.2  -2.96216   TCTTATCACGATATA               CGGCAT TGT ATGCGG               GCCAAGTCCCAAACG  49 59
HC660_RS10680 2078888 .. 2078913 -  -7.5  -5.60993   TTTCGCACAAAAAAA         GAGCCCTTCCG AATT CCGAAAGGCCC          TTATGATATGTCATC 100 43
HC660_RS10675 NONE
HC660_RS10670 NONE
HC660_RS10665 NONE
HC660_RS10660 NONE
        ablB NONE
        ablA NONE
HC660_RS10645 2072266 .. 2072284 -  -4.6  -4.86902   GAAATTACAACAAAA             GAATAACG AAA CATCATTC             AGGAGAAATCAAAAT  73 24
HC660_RS10640 2071955 .. 2071973 - -10.3  -5.61596   ATGTGCAGAAAAAAA             TCCGCAG TGGCT CTGCGGA             TTCAAACGTGCACCT 100 27
HC660_RS10635 2070930 .. 2070947 -    -2  -5.14563   TGTTTTATGAAAAAA             CGGG-AT GAATT ATACCCG             GTGTTCTAAACAATT  69 231
HC660_RS10625 2070688 .. 2070706 - -11.7  -5.46657   CAGCCGAATAAAAAA             CCGGAGC TGGCC GCTCCGG             TTTCAAGCCTTAACA 100 35
HC660_RS10620 2070001 .. 2070013 -  -4.7  -2.50252   ATTTCTATAACATAT                TGGCG TTT CGCCC                TCTTTTTCCTCTCTC  49 40
        yodL 2069621 .. 2069650 - -13.7  -5.15117   GAAAACCTTAAAAAA       CAGAAAACTGCGG ATGT CCGCAGTTTTCTT        TCGTTATGTTGTTTG 100 29
        deoD 2068551 .. 2068576 - -11.9  -4.09117   CGTATCCATAAAGAA         GAGGC-TGCCGG CAC CCAGCACGCCTC         TTGATTTATTTTATT  95 36
HC660_RS10600 2067649 .. 2067672 - -15.4  -4.74103   TTTTTAATGGAAAAA          CCCGCTTATC CAAT GATAAGCGGG           TTTTTTATTTTATAT 100 35
HC660_RS10585 2065011 .. 2065033 - -17.8  -5.75342   GGTGCTTAAAAAAAA           CCATACGCGG TAA CCGCGTATGG           TTTTTTACATTTCTT 100 30
HC660_RS10570 NONE
HC660_RS10565 2061570 .. 2061597 - -11.4  -5.16151   TAAATCTAAGAAAAA        CCTTAGTCCG GATAAACA CGGACTAAGG         TTTTTTTATTGAAAC 100 31
        yodB 2060412 .. 2060443 - -10.3  -5.45802   GGCCTAAAATAAAAA      GTCATGTAAACGG CATGAC CCACTTACATGAC       TTTCTCACTGAAACA 100 63
HC660_RS10550 2060015 .. 2060039 -  -7.2  -5.72053   CAATGAAATAAAAAA          GAGAGATCCT TATTC AAGACCTCTC          TTTTATTATTTCTTT 100 31
HC660_RS10535 2058214 .. 2058235 -   -13  -5.27923   TAATGCGATAAAAAA           CGGCCTGC TTCTGT GCAGGCCG            TTTTTGCTAATAGAA 100 32
        rarD 2056749 .. 2056765 -  -2.1  -4.36595   TAGGCAAACTGAAAA              GCCAAAG GCT CAATGGC              TTTTTGATGCCCGTT  59 18
HC660_RS10520 NONE
HC660_RS10515 2056063 .. 2056082 -  -2.1  -3.53091   ACCCTTTTCTTTAAA            CTGTGAA CGGTTT TTCACTG             ATTTGAAGTGAAATA  46 1
       bshB2 2055340 .. 2055367 - -13.6  -5.37593   CTTGAAATTAAAAAA        GGTATAAGGTCC CTAT AGACCTTATACC         TTTTTTTAATCATCC 100 31
HC660_RS10495 2052141 .. 2052162 -  -4.5   -5.7946   TTTTCAAGAAAAAAA           GCATTCA GTATGGCA TGAATGC            TTTTGAAAAAGGGTT  90 98
HC660_RS10490 2050740 .. 2050764 - -10.1    -4.323   TCTAAACAGTTAAAA          GCCTGTCCATT TCA AATGAACAAGC          TGAATCCATTATGCA  86 34
HC660_RS10485 2049060 .. 2049073 -  -6.7   -6.0458   ATAAACTAAAAAAAA               GCCTT TTAA AAGGC                TTTTACATTAGGGCA 100 92
HC660_RS10480 2048369 .. 2048394 -  -4.8  -5.23316   GAGTATACTAAAAAA         GCCC-CTGTAT GCTCA ATACAAAGGGC         TCCCGCTATATTACT  79 36
HC660_RS10475 2047437 .. 2047447 -  -5.4   -3.6502   CATCCCTCATTCAAA                 CAGA GTT TCTG                 CGATATTTCGGACCG  59 6
HC660_RS10470 2045477 .. 2045521 - -11.8  -4.97405   ATTTACAAAAAGAAA CGCCA-AAAAGCATAGAATAA AGGG TTATCCTATGCTTTTATGGAG AAGTTTTTTAAGAAG 100 5
        sucA NONE
        odhB 2041129 .. 2041156 - -14.3   -4.9792   TATTCTATATAAAAA        GGTACATCACG TTTAGC CGTGATGTACC         TTTTTTGTTTTATCC 100 35
HC660_RS10450 2038539 .. 2038556 - -12.7  -5.16237   AACTCTATTAAAAAA             GCCCCCT TTCC AGGGGGC              TTCATTTTTTAAAAA 100 34
HC660_RS10430 2033660 .. 2033682 - -15.6   -4.0825   TTTTGAATCAAAGAA           GAACCGCAGC TTA GCTGCGGTCC           TTTGCATAACGATCT 100 126
HC660_RS10425 2032958 .. 2032971 -  -2.3  -5.42514   TGACAAACCAAAAAA               GGCGT TTTT ACGGC                ACAAAAAAAGCCAAA  75 77
HC660_RS10420 2032371 .. 2032399 - -13.3  -5.93809   TTTTTATAAAAAAAA        GCAAGTACACC TTATATC GGTGTACTTGC        TTGCGATTTTCAATT 100 35
HC660_RS10415 2031601 .. 2031621 -  -9.8  -5.47821   ATGTACGCAAAAAAA            CTCCTATC TCACG GATAGGAG            TCTTCATTCATTAAA 100 36
        ssrS 2031194 .. 2031216 - -12.1  -5.58522   CAGATAAAATAAAAA           GCCATTTCC ATAAA GGAAATGGC           CTTCGCTACATCTTG 100 24
        recQ 2029251 .. 2029265 -  -2.9  -5.66926   TCAAAAAAAAGAAAA               GAAAA TGTGT TTTTC               AAAGAAAAAAAGGTT  80 44
HC660_RS10400 2028139 .. 2028164 -  -9.1  -6.20267   CTAAAAACAAAAAAA         GGACACG-AGCT TAG AGCTACATGTCC         TTTATCTTCATCTAT 100 45
HC660_RS10365 2020864 .. 2020888 - -12.9  -3.36202   AGACACACTTCAGAA          GGCCGATGCTT AAA AAGCACCAGCC          TTTTGGTTTATGCCT  95 33
HC660_RS10360 2020203 .. 2020219 - -10.9   -5.1361   ACAAACCTCAAAAAA              GCCATAC TGA GTATGGC              TTTTAATAATACGGT  93 28
        czrA 2018886 .. 2018926 -  -6.3  -5.35815   CACAGTAAAGAAAAA GACATCCTTGCTTAATCGC GACAT GCGGC-A-GCAAGGATGTC TTTTTTAATCGTGTC  85 30
HC660_RS10340 2017195 .. 2017222 - -12.9  -4.36649   TAGATTATAAAAGAA        GAAACCTGACA GCATTG TGTCAGGTTTC         ATATATTTTTTGCAT 100 17
HC660_RS10335 2016624 .. 2016661 -  -8.7   -5.4505   CTCCTGAATAAAAAA   CTAATGGTGTTAGTT TTATTATT AACTAATACCATTAG    TTTTTCAAGAGTGTT 100 39
HC660_RS10330 NONE
HC660_RS10325 NONE
HC660_RS10320 NONE
HC660_RS10315 NONE
        csaA 2013334 .. 2013358 - -17.3  -3.76373   GCCTCAATACGCAAA          GACGTTTGCCT CTT AGGCAAACGTC          TTTTTTGTGTTATCC 100 35
HC660_RS10295 2011266 .. 2011310 -  -8.1  -3.52506   AATCAAATTCAAACA TAAAAAAGTCGAATTCCCT GTCCTTT AAGGAAAACGACTTTTTTA TACGACTTCTTCAAG  71 94
HC660_RS10280 2009421 .. 2009439 -  -2.5  -2.67456   ATACAGGATTATAAT             TATTGAT GGTCT ACCAATA             TAAAGAAAGGAAAAT  41 148
HC660_RS10275 2009037 .. 2009052 -  -4.8  -3.35371   TACATGGTGAATGAA              CTTAAA ATAT TTTAAG               CATTAACAATTTTAT  54 21
HC660_RS10270 2008392 .. 2008410 -  -9.6   -5.2015   TGAATAACAGAAAAA             GACAGCCA AAA TGACTGTC             TTATACATCACACTA 100 38
HC660_RS10265 NONE
HC660_RS10260 2005959 .. 2005975 -    -8  -5.46657   TACTTTAATAAAAAA              GCTCTC CTATC GAGAGC              TTAAACATTATCTTT 100 54
HC660_RS10255 2005238 .. 2005259 -  -7.9  -4.36914   GCTTTTTGTACAAAA           CCGGGGTGC GCCA ACACCCTGG            TTTTTTTTATTTTAT  80 204
HC660_RS10245 2004242 .. 2004266 -  -7.2   -5.0916   TGTGCAATATAAAAA          GAACCTGG GCAATTTCA CCAGGTTC          TTTTTTAATCTCCCG  85 124
        ppsA 2001278 .. 2001303 -  -6.1  -5.71712   TTTCACATAAAAAAA         CCGGATTCCCAC TCC ATGGGT-TCCGG         CTTTGCTTATATTAA 100 223
HC660_RS10220 1997987 .. 1998019 -  -4.3  -2.93348   GGGATTAACACTACA      CCAAATATTCACTAT ATA ATATTGAATTTTTGA      AAGCACACTGTTAGA  49 229
HC660_RS10210 1997550 .. 1997561 -    -3  -4.63184   AACTCACTCTAAAAA                GAAT TGTA ATTC                 AGTTATGCAATTGAT  62 61
HC660_RS10205 1996662 .. 1996681 -  -6.5  -5.14563   TGTGGTATGAAAAAA            GAGCATT TAATTT AATGCTC             TTTTCAGTTAAATTC  83 452
HC660_RS10175 1994584 .. 1994614 - -14.2  -3.39895   CTCCTTATGAAGCAA       CAAAACAATCGGTT TTA ATCCGATTGTTTTG       GCTTTTTCTGATTTG 100 274
HC660_RS10165 1993223 .. 1993234 -  -4.4  -3.28712   CCTGCGGGTGTATAA                GAGA CTGC TCTC                 AGAATGGCTTTCGAT  52 220
HC660_RS10150 1991447 .. 1991458 -  -2.2   -4.6644   AACACATTTGAAAAA                GACGG AAT CCG-C                TGGTAAAAAGGATTA  61 424
HC660_RS10130 1989323 .. 1989335 -  -4.9  -3.36919   ATAAAAGCTCGATAA                CTTTT TAT AAAAG                TTAGACTTTTTGTTC  54 456
HC660_RS10120 1986789 .. 1986819 -  -7.7  -5.12707   TTAAAGTTTAAAAAA      GATCGG-CAGATGC ATGA ACATCTAACCGATC       GGCAATAGTATAGCT  89 309
HC660_RS10115 1986153 .. 1986165 -  -4.1  -4.43208   ACACTTTCAAAGAAA                CAAAC AAG GTCTG                CGTATTTGTTGTTCG  64 103
HC660_RS10110 1985161 .. 1985179 -  -3.9  -5.42259   GTAGCCCTAAAAAAA            GCAG-TCT ATTC AGATCTGC             TCCTTTACGTTCTCT  79 16
HC660_RS10105 1982757 .. 1982780 -  -3.8  -3.07816   TCCTGAGCTATTTAA          TTTGATTGGG TCCC CCCAATCACC           ATTAACCGTTTCACA  48 392
        xylA NONE
        xylB NONE
HC660_RS10080 1975785 .. 1975806 -  -8.7  -5.54192   ACTAATTTAAAAAAA           CCCTTCACA TGAC TGTGAGGGG            TTTTTTGTGCGTAGA 100 99
HC660_RS10065 1971211 .. 1971223 -  -9.1  -2.65091   ATTCTAACTCACAAT                GTGGC CCT GCCAC                TAAAGTAATGCGCAT  67 410
HC660_RS10055 NONE
HC660_RS10050 1969284 .. 1969310 -  -3.1  -4.24002   CTGCAAACGTTAAAA        CAGCACT-AC GTCTTCGT GTGAGTGCTG         TTTTTTATGCTATAT  60 117
HC660_RS10035 1966180 .. 1966202 -   -10  -5.07486   CATCTCGAACAAAAA           GAATCCATCT CCA AAATGGATTC           TTTTATAATTCTATC  93 39
HC660_RS10025 NONE
HC660_RS10020 1963028 .. 1963045 -  -5.5  -5.69262   CCATAAAAATAAAAA             GCAGGAT CGGT AACCTGC              TTTTCATGAATTTAT  95 70
HC660_RS10000 NONE
HC660_RS09995 1957432 .. 1957447 -  -7.5  -2.74799   TATAATTCCTCAAAC              GGCGG CAAATT CCGCC               TTATGCTAATACCTT  62 26
HC660_RS09990 1956084 .. 1956103 -  -7.8  -5.02074   CCATTGCTGAAAAAA            GCGCCC TATTCCAG GGGCGC             TTTTCATCAGGATGC  89 32
HC660_RS09985 NONE
HC660_RS09980 NONE
HC660_RS09975 NONE
HC660_RS09970 1952210 .. 1952237 - -12.9  -4.43571   ATAAAATCATGAAAA        GCAAGAGAATG ATAAGA CATTCTCTTGC         TGCTCTTCCCTATTC 100 206
HC660_RS09950 1949588 .. 1949605 - -11.3  -5.96894   ATTCAAATAAAAAAA             GCCTGTC ACTA GACAGGC              TTTCGTTTTACGGAT 100 33
         rtp 1947654 .. 1947694 -  -2.8  -4.93968   ATGTATAATGAAAAA CAGAAAACACCCGATACTCG TGG CTA-TACCGGGT-TTTTCTA TGTTAAAAATTATCT  67 28
        proC NONE
        proB 1945490 .. 1945521 -  -7.3  -5.52023   AGTATCAATAAAAAA      GAACCCGAGCTTC TGTGCG GAAGTTCGGGTTT       TTTTCGTGTATGTCT  93 46
        gltB NONE
        gltD 1938325 .. 1938352 - -10.7  -5.27399   CAATAGATTAAAAAA        GAAACCGG-CTG ACAAA CAGTCCGGTTTC        TTTTTTTATATAATC 100 49
HC660_RS09905 1936113 .. 1936137 -  -6.5  -5.84011   AATAAAAAAGAAAAA          CTGTACTCA TTTTTGC CGAGTACAG          TTTTTTTCTATGGAC 100 221
HC660_RS09895 1933897 .. 1933917 -  -9.1  -5.82281   AAATATACAAAAAAA            GACACAATT TGA AATTGCGTC            CTAGTCTTCATCCTT 100 26
HC660_RS09890 NONE
HC660_RS09885 1932847 .. 1932863 - -10.8  -5.60689   TTATATAAGAAAAAA              CGCCCG TTTTC CGGGCG              TTTTTTATATTGAGA 100 90
HC660_RS09875 1930580 .. 1930600 - -10.5  -5.96894   ACGTAAACAAAAAAA            CACTGCTCA AAA TGAACAGTG            TTTTTTTGGAGTTTA 100 38
HC660_RS09870 NONE
        dacB 1927970 .. 1927990 - -12.7  -5.82281   AAACATATAAAAAAA            CCTGTTTTC GTG GAAAACAGG            TTTTTTATTGATTTG 100 30
HC660_RS09860 1919933 .. 1919948 -  -4.8  -4.08394   ACACCTTTTCCAAAA              GTTAAA GACC TTTAAC               GAGATTTTCGATGCT  63 11
HC660_RS09855 NONE
HC660_RS09850 NONE
HC660_RS09845 1893700 .. 1893712 -  -3.4  -4.21194   TTTCATTAGTGAAAA                CTGA GCATA TCAG                CGATCTCTTGGAGTG  60 3
HC660_RS09840 1889800 .. 1889825 -  -8.3  -5.26119   CTTGCAAAAAGAAAA         CCGGACAGA GAATCGCT TCCGTCCGG          CCTGCATTTGTTTAA 100 37
HC660_RS09835 1889298 .. 1889327 -  -4.3  -5.15969   GGTGAACGTAAAAAA       GTCCCGAAGCA TCTTTATC TGCTTTAGGAC        TTTTTATCATTTATG  75 19
HC660_RS09830 1887611 .. 1887635 - -14.4  -4.26305   AAAATGGAATATAAA          GAGACGGCTA GTAAA TAGCCGTCTC          TAAGGGCTATTGATT 100 32
HC660_RS09825 1886843 .. 1886853 -  -5.4  -4.24204   CATCCATATTGAAAA                 GCAA TCC TTGC                 CCTTCAGAAAGTGCC  68 112
HC660_RS09820 NONE
HC660_RS09815 NONE
HC660_RS09810 NONE
HC660_RS09805 NONE
HC660_RS09800 NONE
HC660_RS09795 NONE
HC660_RS09790 1878964 .. 1878983 -  -7.1    -5.093   TCGAAAACAATAAAA            GGAGCGC TTATTC ACGCTCC             TGGTACTTCCTTTTA  85 38
HC660_RS09785 1877592 .. 1877619 -  -7.8  -3.66378   GATAGCTTATGGAAA        TGCATAG-GGATG ACT CTTCCCCTATGCA        TCTTTTTTGTTATCT  70 35
        xynD NONE
HC660_RS09750 1871384 .. 1871421 - -10.2  -4.57353   TTCTACCACAGAAAA   TAAGCCAATTTTCT TTTTCGTGTG AGAAAATTGGCTTA    TTGCTATGATCTATT  89 58
HC660_RS09745 NONE
HC660_RS09740 1869843 .. 1869871 -  -6.8  -3.03212   AATATGAATGAGAGA        GCCGATAACC GCGTAATAG AGTTATCGGC        TTTGTATCTGTATGG  58 83
HC660_RS09720 1865078 .. 1865100 - -15.6  -5.19212   ATCATCATTAAAAAA           CCCGCTCACA TAT CGTGAGCGGG           TATATTTGTTTTTCA 100 191
        plsY 1859114 .. 1859124 -    -4  -3.95435   CGTGTCAAAATAGAA                 GTTT TTC AAAC                 ATTTATAACCATTTG  57 28
HC660_RS09695 1858720 .. 1858740 - -12.7  -5.64274   TCATTTATAAAAAAA            GAACGCATA TCA TATGCGTTC            TTTTTCTTATTGATA 100 32
        sspO 1853497 .. 1853509 -  -4.1   -2.8272   TCATAAAATGAGAAC                CTCCT TAA AAGAG                TTCAACGTTATTGAT  45 33
HC660_RS09650 1853317 .. 1853332 -  -4.7  -5.66684   GAACGCATAAAAAAA              CAGAC ACTAAG GTCTG               CTTTTACTACATATC  85 32
HC660_RS09645 1852830 .. 1852859 -  -9.5  -4.43501   AATGGACGGAGAAAA       GTCACTTTCAT AATAGGGG ATGAAAGTGAC        TTTTGATTTTAGCTG  86 34
HC660_RS09640 1852183 .. 1852204 -  -5.9  -5.33921   AAATGAATTAAAAAA           CCTTTCC TCTTCGCG GGAAAGG            TTTTTTATTTAAGAA  84 30
        ynzD 1850020 .. 1850045 -  -9.2  -4.39828   AACATGGTTATAAAA         TAAAAAACCC TTTATC GGGTTTTTTA          TTTTGCAATCATTCA  86 34
        lexA 1844791 .. 1844816 - -11.8  -5.07652   TTTTTTAAAACAAAA         CCCCCACTCC GTAAAG GGAGAGGGGG          TTTATTCTTTGTAAC 100 56
HC660_RS09570 NONE
HC660_RS09565 1842694 .. 1842718 -  -2.1  -3.29325   GTTTTAGAAGCAAGA          GCGATAATATG TTT CATTTGATCAC          CTATATTTGAGGCAA  45 26
HC660_RS09560 1842238 .. 1842260 - -12.1  -4.31412   AAACAGTTATTAAAA           TAAGGAGGC TTTGC GCCTCCTTA           TTTTTCATCCTTCTG  95 23
HC660_RS09515 1835662 .. 1835677 -    -9  -5.16206   AAATCAATATAAAAA              GCCGAT GTTC ATCGGC               CGCCAAATCATTTTA  91 43
HC660_RS09510 1835249 .. 1835269 - -12.5  -5.40072   TTTTCTGCAAAAAAA            CCCCCGGCC ATT GACCGGGGA            AGCAAAATTGAGGAG 100 54
HC660_RS09505 1834229 .. 1834251 - -12.6  -5.68023   TTACAACGAAAAAAA           GGCCGCCGTC ATT GCCAGCGGCC           TTTTGATGCTTCTTT 100 39
HC660_RS09495 1832973 .. 1832996 -  -9.7   -5.4505   GTGGGCAAGAAAAAA          GCATTTCTC ATTACA GAGAAATGC           TCAATATCTTTAATC 100 189
HC660_RS09490 NONE
HC660_RS09485 1832059 .. 1832070 -    -3  -3.27676   AGTTAGCTAAATAGA                CATA GGGT TATG                 TGCATAGAATCACCG  46 82
HC660_RS09480 1831131 .. 1831149 -  -2.4  -5.72622   TTTATAAAGAAAAAA             GCAACA AATTAAA CGTTGC             TTTTTACAGTTTATC  84 112
         alr 1828167 .. 1828222 -  -9.4  -3.24166   AGCTAAGTAACGTAA GTATCACAATATCAATCGAAAAAT AAATCTAA AATTCCCCATTGATATTGTGATAC TCTTTTTTAAATTGC  75 94
        bglS 1825219 .. 1825253 -  -5.9  -2.86271   TTCTCATTACAATCA    TAAGAGCCTGGCTA GATTGCGG CAGC-AGGCTCTTA     TCACATTTGACATTA  54 38
HC660_RS09410 1817251 .. 1817271 - -16.9  -4.61527   AAAATGGTGGAAAAA            GCCCCTCTC TAT GAGAGGGGC            TTTTAACTAATTAAG 100 36
HC660_RS09380 1809422 .. 1809448 - -12.3   -5.7946   TCTTGAATAAAAAAA         CCCGGTTTCTC ATGAA GAGGAACCGGG         TTTTTTTATCAGGCA 100 59
HC660_RS09325 1800534 .. 1800549 -    -9  -4.25873   GGGGGATAAAAAAGA              CCCCTT TTAT AAGGGG               CTGCCGGGTTTAATA  83 35
        ebrA NONE
HC660_RS09315 1799711 .. 1799737 -  -9.4   -4.1523   GGCAATCATAAAGAA         GCAGACGGTC AATGACA GGCCGTCTGC         TTTTTTTCTTTATTA  82 7
HC660_RS09295 1796345 .. 1796382 - -12.9  -4.62783   TATGTACGCTAAAAA   GACACTGCTTATCCTTT TTAT AAAGAACCAGCAGTGTC    CACGAAGATCATGAA 100 44
HC660_RS09290 1795838 .. 1795864 -  -5.2  -3.96483   ATTCCATGCAAACAA         GCGCCTTT TGGGCAATTTC AAAGGCGC         TGTATTCTTTCGACA  61 54
HC660_RS09280 1794300 .. 1794327 -   -13  -3.96705   TTTACAAAAGTGAAA        TAATCCTTTTTC TATT GAAAAAGGATTA         TTTAGCGAGACTAAT 100 42
HC660_RS09275 1793318 .. 1793331 -  -3.8  -3.62046   GGATCTGGGCAAGAA               GGTG AAGACA CACC                GGTGATTACAGGTGT  53 336
HC660_RS09265 NONE
HC660_RS09260 1790501 .. 1790524 - -11.8  -4.78572   TTTGAAGTAATAAAA          GATCCCTTGA ATTT TCAAGGGACC           TTTAAGGATTATAAA 100 34
HC660_RS08670 1675253 .. 1675277 - -12.1   -3.0682   CCGATTATAGACAGA          CAGCCCCCAAA ACC CTAGGGGGCTG          TTTTTGTTATCGTCT  87 32
HC660_RS08600 1659661 .. 1659685 -   -10  -5.00895   TTCACCACATAAAAA          CGCCTGCC ACATATCAG GGCAGGCG          TTCATTTTGTTATAC  93 35
HC660_RS08510 1640166 .. 1640194 - -14.7  -4.78597   GTAAGAAGAAAGAAA        TAAGCCAGAGCAT ACA ATGCTCTGGCTTT        TCTTTGTGCTGCTCA 100 38
HC660_RS08240 1580793 .. 1580818 - -11.1  -3.68023   AACCCTCAAAATGAA         CCGGCCCTAGA GTCA TCAAAGGCCGG          TTGTTTCATTTTTAT  83 37
HC660_RS08220 1577849 .. 1577871 - -16.4  -3.29211   TAAGCTGAAAGCGAA           GAGCACCTGA AAT TCAGGTGCTC           TTTTTATATGCTCAA 100 29
        ylbJ 1574625 .. 1574647 -  -4.9  -3.61591   GAAAAATTCAGACAA           GGATGAG TGTTTTGAG CTCATCC           TTTTTTTGTTCCGTT  57 20
HC660_RS08160 1569164 .. 1569187 -  -8.2  -4.52047   GACGATACCATAAAA          GGTACAGC GGCAATTG GCTGTACC           TTTTTTATTACATTT  83 33
        ctaA 1561851 .. 1561876 -  -9.1  -5.37345   TGGAAGGATAAAAAA         GACCAAAGC GTATAAGA GCTTTGGTC          CTGTGTCTTATGCCC 100 33
HC660_RS08100 1554644 .. 1554659 -  -2.4  -2.94938   TTAAAAGGTGAGAGA              TCCGGG CTTG CCCAGC               TTGCCGCTGACTTGC  42 50
HC660_RS08090 1552544 .. 1552566 -  -3.3   -5.4593   CCAAAATAAGAAAAA           GCTAAAGCC GCAAG GGCTAAAGC           TTAATCATTATTGTT  78 26
HC660_RS08085 1552219 .. 1552239 - -11.9  -4.86773   CAAAATCATGAAAAA            GACTCAGCA TCT CGCTGAGTC            TTTTTTTTATTCTGT 100 57
HC660_RS08070 1549648 .. 1549667 -  -9.3  -5.28481   TACGCAACGAAAAAA            CACCGCA TTCATT TGCGGTG             TTTTTGATTACAATG 100 61
HC660_RS08065 1548788 .. 1548814 - -10.2  -4.56914   TGATCTAAAGGAAAA        GCGCTTG-CCG GATTGA CGGACAAGCGC         TTTTATTACATTAAG  89 36
HC660_RS08040 1543894 .. 1543911 - -11.3  -5.28166   GAAAATCAAGAAAAA             GCCTGAG ATAT CTCAGGC              TTTTCATTTAGAAAT 100 40
HC660_RS08030 1542280 .. 1542309 -  -5.8  -5.28176   TTCATGCACAAAAAA       CCTCCCAATC TTTAACCATC GATTGAGAGG        CGAGCTTGGTGATGA  84 51
HC660_RS08010 1539766 .. 1539789 -  -7.5  -4.68645   GATGTAAAAGGAAAA          GAGCCGG-AT GAAAG ATCCCGGCTC          TTTTTTATGCTTGTG  83 30
        speA 1537804 .. 1537824 - -16.9  -5.19251   GAAGAGTAAGAAAAA            GCATGCGGC TTA GCCGCATGC            TTTTTGATTTATTGA 100 34
HC660_RS07990 1536841 .. 1536864 - -13.2  -5.84432   GATAACATAAAAAAA          CAGCCC-CGCT GTA AGCGAGGGCTG          TTTTCCTTTATTTAG 100 33
HC660_RS07960 1530372 .. 1530395 - -12.5  -4.56702   GTGCAACGAAACAAA          TGACCAGCC GTAAAT GGCTGGTCA           GTGTTTTACTGTGTA 100 45
HC660_RS07955 1529711 .. 1529737 - -16.6  -5.79595   TGCTAAAATAAAAAA         GCGGCTGGCACT TAG AGTGTCAGCCGC         ATATTTTCTTTTAGC 100 36
       rnpZA NONE
HC660_RS07940 1526639 .. 1526662 - -11.1  -5.46657   CACTGCAATAAAAAA          GATGCACTC CTAAGT GAGTGCATC           TTTTTTTAAACCTCC 100 31
       mreBH NONE
HC660_RS07905 1519847 .. 1519880 - -14.1  -3.40134   AAAGGAGTGCAAAGA     GAAAAACCCAAAACA AAAT TGTCTTGGGCTTTTC      AATACTTATGGATGA 100 31
HC660_RS07900 1518510 .. 1518537 - -17.2  -4.99861   TATGAAGCAGAAAAA        TAAGAAGGAGGC GAAA GCCTCCTTCTTA         TTTTAAAAAGCCCAA 100 28
HC660_RS07885 1515436 .. 1515463 -   -12  -5.41941   CAAACCAAATAAAAA        CGCCTTGCTGGCC TTT GGACAGCA-GGCG        TTTTTTAATTGGAAA 100 30
HC660_RS07800 1497901 .. 1497921 - -10.5  -5.06505   AAGCACACAGAAAAA            CTGCTTGAA GAG CTCAAGCAG            TTTTTTTATTATTGG  93 34
HC660_RS07780 1494696 .. 1494713 - -11.3  -4.90266   TTCAGTAAGTAAAAA             CCGAAGC AAAA GCTTCGG              TTCTTTTGTTATTCT  93 34
HC660_RS07705 NONE
HC660_RS07700 NONE
HC660_RS07695 1481596 .. 1481622 - -10.3  -4.75174   TATTGAATGCAAAAA         TGCGCTTTTTC TGAGG AAAAAAGCGCA         TTTTTAACTTATATT  91 39
HC660_RS07690 1480944 .. 1480978 - -18.8  -4.17878   TCAAACGAAACTAAA     CAGCCAATCACCGATA AGC TATCGGCAATTGGCTG     GATAAAATGTGTTTT 100 94
HC660_RS07680 1479445 .. 1479472 -  -3.5  -5.60993   CTTCTCAGAAAAAAA        GAAGACAACCA GCGATT TGATTGTCTTT         ATTGTATCATGTTCT  81 67
HC660_RS07675 1478122 .. 1478141 -  -9.3  -5.55855   TCCAAAAAAATAAAA            CAACGGC TTAAAC GCCGTTG             TTTATATCGTCTGCA 100 27
HC660_RS07660 1472867 .. 1472894 - -17.2  -5.27335   TGGGTGAAATAAAAA        GAGATTGCCTGT CAAA ACAGGCAATCTC         TTTTTATTATTTTCC 100 32
HC660_RS07645 1468698 .. 1468710 -  -6.9  -3.76411   GTAAAAGTAGCGAAA                GCAGG CTA CCCGC                TAGGCTTTATTGTTG  66 359
HC660_RS07600 1459522 .. 1459543 - -10.1  -5.79595   TTTTAAAATAAAAAA           CAGCGGTCC AAAT GGACAGCTG            TTTTTTTATGGATCA 100 31
HC660_RS07570 1453792 .. 1453807 - -10.4  -5.14563   TTTTTGATGAAAAAA              GCTGCC GGCC GGCAGC               TTTTGAGAAAGCTAA  93 108
HC660_RS07535 1445841 .. 1445870 -   -18  -4.83246   GGAGAAATAAACAAA       CGCGGGCTTTTC AGCATG GAAAAGCCCGCG        GGTTTTAACGGTACC 100 203
        motA NONE
        motB 1444102 .. 1444128 -  -9.5  -5.71638   TAATAAGTAAAAAAA         GGAAGCCTTGT GATAG ATAAGGCTTCC         TTTTTTACTATTTTT 100 33
HC660_RS07515 1441923 .. 1441946 -  -8.9   -4.6313   CCGAAAATAAAATAA          GCCCTCCTGA GACTG TCAGG-GGGC          TAGGAAGAGGAGACG  86 25
HC660_RS07500 1440589 .. 1440610 - -10.1   -5.3798   CAATAAGAAGAAAAA           GCCCCGTTT ATAA AAGCGGGGC            TTTTTAATTTATCGT 100 34
HC660_RS07470 1434943 .. 1434967 - -18.7  -5.01732   AATGGCCGTAAAAAA          GCCTCCTTCTC AGA GAGAAGGAGGC          TTAACAATCATGTCC 100 284
HC660_RS07465 NONE
        mtnA 1432513 .. 1432529 -  -3.7  -3.53761   GAACTGCTTGTGAAA              CTGCATA TCT TATCCAG              CGCTCAAAAAGATGA  52 116
HC660_RS07440 1428349 .. 1428380 - -17.4  -6.01725   AACAAAAATAAAAAA      CACCTCTTAGGCGG AATG CCGCTTAAGAGGTG       TTTGTCTATTTTAAA 100 31
HC660_RS07415 1424534 .. 1424556 - -14.8   -5.4505   TGGGGGAATAAAAAA           CCCCCCGGCA ACC TGCCGGGGGT           ACATCCTGATTATAG 100 35
HC660_RS07410 1424202 .. 1424223 - -12.3  -3.20617   AGCTCAAACTGAAGA           TTCGCCGAG TGCC CCCGGCGAA            TAGAGTCCTGAGTTT  87 39
HC660_RS07385 1417750 .. 1417776 - -10.8    -5.252   TATGGGTATAAAAAA         CAGCCGGCGC TGTTAAC GCGGCGGCTG         GTTTAATATCAAGTG 100 11
HC660_RS07380 1416778 .. 1416788 -  -2.4  -3.59979   GGGCTGCATGGTAAA                 CGCC ATT GGCT                 ATGATGTGCCGGAGA  48 24
HC660_RS07375 1414932 .. 1414954 -  -9.9  -4.40333   CTGAAATAACACAAA           GAGCTGACC GAATA AGTCAGCTC           TTTTTCTTCAGCTGA  89 19
HC660_RS07360 1411163 .. 1411187 -  -3.6   -4.9448   ACCTATCAAACAAAA         GACTGATGCCA TGGT CAGCA-CAGTC          TTTTTAAATTTGATG  71 29
HC660_RS07350 1409350 .. 1409368 -  -7.4  -4.15044   CTCCTGCTGAAGAAA             GCTGGC ATCCACA GCCAGC             ATTTACTGTTTCGTT  73 60
        tnrA 1407793 .. 1407833 - -17.8  -3.97947   TTCACTCATTATAAA  CGATAAAAGTCCGTCTCA GATTG CGAGGCGGACTTTTATCG  TTTATCGGTTTTTGT 100 27
HC660_RS07295 NONE
HC660_RS07290 NONE
HC660_RS07285 NONE
HC660_RS07280 1398466 .. 1398486 - -11.2  -4.14859   ATCAATAATGAGAAA            GCCGCTAT TCAAC ATAGCGGC            TTTTTTATGAGGTAA  86 30
         isp 1396105 .. 1396130 - -14.1  -4.93365   TCTCACAACTAAAAA         GCCTCTTTCCC ATGA GAGAAAGAGGC          TTTTTTACAAAACAT 100 335
        metE 1393708 .. 1393727 - -12.2  -5.45802   TTTCTAAAAGAAAAA            CCATCTGC ATCT GCAGATGG             TTTTCATCTTAAACA 100 34
HC660_RS07255 1392442 .. 1392474 - -12.9  -3.37344   TGCTCAGCGAATTAA      CAAAGGATCAGGC CGTACAT GCCTGATCCTTTA      ATATTCTTTTTTATG  95 23
HC660_RS07240 1390219 .. 1390246 - -11.4   -5.4505   TCGCTGAATAAAAAA        TGAGGATGCC TCACATAG GGCATCCTCA         TTTTTTTTGGTGCAG 100 23
HC660_RS07190 1382809 .. 1382838 - -15.2  -3.40403   CCTTTTTTAGGATAA       TAGAAGAAGGCG GACGAG CGCCTTCTTCTA        CATCCGTACAATGAC 100 23
HC660_RS07175 1379689 .. 1379707 -  -3.9  -3.26471   TCATCTCTATATTAA             CGTATCT TACTG AAATACG             CTGTTTAAAACATGA  49 57
HC660_RS07170 1378569 .. 1378593 - -12.9  -5.42975   TGAGATAAATAAAAA          GCTGGCTCC GTTGTTA GGAGCCAGC          TTTCTTTTATGATTG 100 32
        htrA 1366618 .. 1366645 - -19.2  -5.06414   TTTGTCTAACAAAAA        GCCTCAGACCGC TTTT GCGGCCTGAGGC         GCTTTTCTTAAGAAG 100 33
HC660_RS07110 1366205 .. 1366227 - -14.9  -3.96148   TGTCCTGACCAGAAA           CCCCTGTCC TTTAC GGACAGGGG           TTTTTATGTATCAAA 100 119
        steT 1360087 .. 1360109 -  -9.9   -5.1675   TGATTCACCAAAAAA           CGATTCCCT AAACA AGGGAACCG           TTTTTTTTAGCTGGC  93 32
HC660_RS07085 NONE
HC660_RS07080 1358180 .. 1358200 -    -9  -5.52384   GTTTCATCAAAAAAA            CCGCTCCT TTGAC AGAAGCGG            TGAGACATTAAAAAA 100 33
HC660_RS07075 NONE
HC660_RS07070 1357146 .. 1357170 -  -7.9   -4.0219   TAAGAAAAGGAATAA          GGACAAGAG CTGTTTT CCCTTGTCC          TTTTAGTGTGATCAT  74 37
HC660_RS07065 1356940 .. 1356958 - -14.6  -5.23765   GAAAGAACATAAAAA             TCCCGGAG TTG CTCCGGGA             TTTATTTTTTCTTCC 100 27
HC660_RS06880 1328695 .. 1328707 -  -2.6   -5.0065   TAGCGAGAAAGAAAA                GCCC GTTTA GGAC                TAAAAAAGTGTGTTG  67 127
HC660_RS06875 1327757 .. 1327779 -  -2.7  -4.17958   AAGAGCTGGAAGAAA           GAGAACG GGATATTGT CGTTCCC           ACGACATTTCCGCGT  58 295
HC660_RS06860 1325712 .. 1325731 -  -3.4  -6.32216   ACATAGAAAAAAAAA            GACCCGGT GATT ACCGGGGA             AAATAAATAGAAAGT 100 48
HC660_RS06840 1322312 .. 1322332 -  -5.5  -5.83226   AAGGCAATAAAAAAA            GATACCT TTAGGTC AGGTATC            TTTTTTTAGGTTACA  95 36
HC660_RS06835 1321200 .. 1321235 - -22.2  -3.32844   GGTGTGACGCTATAA    CAAGAAAGGCTATCCT GTAA AGGATAGCCTTTCTTG     ATTAAATCAGCTTTA 100 27
HC660_RS06765 1304982 .. 1305007 - -11.2   -5.0666   GAGTTAAAAAAGAAA         GGAGAACGGG TTTTCG CCCATTCTCC          AGCCGCTGCTATGCA  93 34
HC660_RS06760 1304132 .. 1304145 -  -5.3  -4.17417   TTAATGAGAGAGAAA               GGTAA TCCA TTACC                GTGTGCCTCCCTTCA  65 21
        fetB 1303358 .. 1303381 - -12.4  -4.51699   ATAACCAGTACAAAA          GCCGCTTTCC AAAT GGGAAGCGGC           TTTGTCGTTATCCAT 100 33
HC660_RS06745 1302138 .. 1302158 - -12.7  -5.49569   CAGTAACATAAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATG 100 34
HC660_RS06730 1299040 .. 1299066 - -16.8  -3.74693   TCGTATTTGATTAAA         CAAAAAAGAGCC GGA GGCTCTTTTTTG         TTTTACAAGACAATA 100 28
HC660_RS06705 1293253 .. 1293268 -  -4.6  -5.60993   TTGTCCATAAAAAAA              GAGGCT GAAC AGCCGC               AGGTACTTTATCTTG  84 33
HC660_RS06700 1292775 .. 1292792 -  -4.7  -5.18726   TCGCTATAAGAAAAA             GCGTCAC GTCA GCGGCGC              TTTTTGATGTTTTGA  79 16
HC660_RS06690 1291529 .. 1291567 -  -2.3  -4.56597   CTTTTTTGTGAAAAA   CAAAGGCGGCCGGGAGA TGGTG TTTCTTTGCCGCCTTTA   GCGTGAAGCTAAGCT  61 34
HC660_RS06685 1290949 .. 1290961 -  -5.5  -3.53012   GGCTGTCGCGGGAAA                TGCCC GTT GGACA                GCCTTTTTTCTTTTT  57 39
HC660_RS06675 1288988 .. 1289004 -  -4.3  -5.72616   ATTCATACAAAAAAA              GGGGAGC TGG ACTGCCC              CCATTTTCGGTACAT  90 48
        cyoE 1287880 .. 1287901 -  -4.4  -5.63517   TTTCCAAACAAAAAA           GAGTCACA TTAATG TGTGGCTC            TTTTTGCAACATCAT  84 37
HC660_RS06665 1286967 .. 1286977 -  -3.2  -4.05085   ATTTTCAAAAAAAAG                 CCAA TGG TCGG                 AAGCAAGAACGCAGA  57 159
HC660_RS06660 1286536 .. 1286552 -  -6.6  -4.92239   TGAAAAATGTAAAAA              GCTTAC TAATT GTAAGC              TTTTTTATAAATGTA  81 64
HC660_RS06640 1282905 .. 1282924 -  -3.6  -2.57344   CATTTGTTTTATAAC            CCAGGTCTA TAA TAG-CCTGA            TGATCCCGTTTAGAT  45 450
HC660_RS06595 1276523 .. 1276557 -  -2.9  -6.18768   AAAACAGAAAAAAAA     TGAGCATCCCGAT TTCAATATC ATCTGGATGCTTA     ATGTGTGCAATGTTT 100 45
HC660_RS06590 1275348 .. 1275358 -    -4  -2.98487   TTATAGCAATTAAAT                 CAAT CGA ATTG                 TCAGCAACACTCGCA  47 349
HC660_RS06585 1274231 .. 1274250 -  -6.4   -4.6635   AAATTTCTAAGAAAA            GCTCCC ACAGAATA GGGAGC             TTTTCTATTTTCACA  77 95
HC660_RS06570 1271429 .. 1271439 -  -6.8  -3.46525   AGAAACAGAAATAGA                 GGAC AAA GTCC                 TAGTCCTGTGTCTAT  63 348
HC660_RS06560 NONE
HC660_RS06555 1269983 .. 1270011 - -14.8  -4.43911   AAACTTGAAGCAAAA        TAAACCCCTTCT GTTGT AGAAGGGGTTTA        AAATTCATTTATCAA 100 37
HC660_RS06550 NONE
HC660_RS06545 1267523 .. 1267543 -  -7.6  -3.04902   TTCGATGATATAAAG            CCCTTCTC TACGT AAGAAGGG            TTTTATTTTTATTTA  64 38
HC660_RS06540 1266654 .. 1266670 - -12.3  -3.65313   GAATCATAGCTTAAA              CCCTTGC GTA GCAAGGG              TTTTTTATTTTGCTT  90 142
HC660_RS06530 1265119 .. 1265137 -  -3.9  -3.61232   GGTCTTATATAAATA             GTATGTC CTTTT AACATAC             AGCAATCTCTCCGTT  53 94
HC660_RS06525 1264564 .. 1264586 - -10.6  -5.00616   CGGTCCGTTAAAAAA           GAAGCCGG CGATAGC CCGGCTTC           TTTTTATTTTTCATC  93 29
HC660_RS06510 NONE
HC660_RS06505 NONE
HC660_RS06500 1260196 .. 1260217 - -10.9  -5.07567   TTATATGCGAAAAAA           TCCGGATCT CAGA AGACCCGGA            TGGTGTTTAATCCTT  93 32
HC660_RS06490 1257473 .. 1257493 -   -14  -4.70659   TTTTACAGTGAAAAA            CCCGGCAG TATCG CTGCCGGG            CTGTTTATTTGGGCA 100 30
HC660_RS06465 NONE
HC660_RS06460 1254978 .. 1254990 -  -3.4  -2.79183   TTTACTGTTATTAGA                TGAG CGAGC CTCA                AATTTTGACTGAGGC  44 68
HC660_RS06455 1254406 .. 1254426 -  -8.3   -5.4593   GGAAAATAAGAAAAA            GCAGAGC GTTTTTA GCTCTGC            TTTTAGATTTACAGG 100 34
        cotY NONE
        cotZ 1253184 .. 1253212 - -15.5  -2.98823   GCTTTTTTACATAGA        GAAAAGCCTGCAA ATC TTGCAAGCTTTTC        CGTCTTATCATGAAT 100 33
        prpE 1243141 .. 1243168 - -13.6  -3.72241   TAGGAATTATGTAAA        GGAGAGAATCAT TAAA ACGATTCTCTCC         TTTTTTATATGGGGC 100 30
HC660_RS06365 NONE
HC660_RS06360 1238923 .. 1238945 - -11.3  -5.41143   CACTCCGCAAAAAAA          CCGGAG-GGC AAGT GCCGCTCCGG           TTACGCGTAATAGGT 100 26
HC660_RS06355 NONE
        spxH 1237358 .. 1237387 - -11.5  -5.00616   TTTTTGTGCAAAAAA       TAGCCTCAAGCAT ATAC ATGCCTGCGGCTA        TTTTTCACATGATTG 100 23
HC660_RS06345 1236877 .. 1236901 - -14.4  -2.91061   TCTTAATAAAAAATG          GCCTGTGCAT ATATG ATGCACAGGC          TTTTTAAAATCCTTT  95 29
HC660_RS06320 1231884 .. 1231905 - -13.1  -4.62336   ATCGCACGTTAAAAA           GAAGGCTGA GACA TCAGCCTTC            TTTTATTTTTCAACC 100 28
        trpS 1221849 .. 1221876 -    -7  -5.72207   GGTAAACTAAAAAAA        GCCGCTCTTTGCA AAT CGCA-AGAGCGGT        TTTTTGATTAGCGTC 100 33
HC660_RS06225 1211573 .. 1211592 - -10.8  -4.10566   ACCGAATAAGAAGAA            GCCACTTT CTCG AAAGTGGC             TTTTCACATGATTTT  86 29
HC660_RS06200 1208453 .. 1208475 - -10.7   -5.1861   GTGATCACGAAAAAA           CCCAAAACA ATATA TGTTTTGGG           TTTTTGGCTTATTAA 100 37
HC660_RS06130 NONE
HC660_RS06125 NONE
HC660_RS06120 1193756 .. 1193782 - -15.2   -4.0098   TTTGAAGTCAAATAA         GAGGCTATGGCG ATT CGCCATAGCCTT         TTTTTATTGCAATTT 100 29
HC660_RS06105 1191415 .. 1191439 - -10.8  -5.56112   ATAAAAATGAAAAAA         CAGCCAGGGCT TTTC AGCC-TGGCTG          TTTTTTTTATGACCT 100 32
HC660_RS06080 NONE
HC660_RS06075 NONE
HC660_RS06070 1186139 .. 1186170 -   -13  -3.16088   ATAGCGCATGAAAAT      GGCTCGC-CTGCAGC AGA ACTGCGGAGCGAGCC      GTTTTTTATTTCTAA  91 37
HC660_RS06060 1184374 .. 1184392 -  -8.2  -6.04953   AGAGAAATAAAAAAA             GTCCTCTT AAG AAGAAGAC             TTTGTCAGTGATATT 100 272
HC660_RS06055 1182446 .. 1182470 -  -8.6  -4.56775   ATCGGGTTTGAAAAA          GACTGCCCAA TTGGT TCGGACAGTC          TTAGAAAGGGATGTT  86 39
HC660_RS06050 NONE
HC660_RS06045 1181046 .. 1181068 - -10.6  -5.54894   AAGGCATGAAAAAAA           CCGAACAGAA TCT TCCTGTCCGG           GTAAAAAAGGGTTAA 100 37
HC660_RS06040 NONE
HC660_RS06035 1178585 .. 1178617 -  -6.9  -4.55697   ATGTCTATAAATAAA      GGGATAGGACAGCTT AAA ACGCTGAACCATCCC      ACATGTACCGATTGA  79 6
HC660_RS06030 1177589 .. 1177614 -  -5.5  -3.81027   CGGAAGCAAGGGAAA         GC-GGAACAG GAGGTAT CTGTTCCAGC         AGCGGAGATGTCCGG  61 284
HC660_RS06015 1175424 .. 1175455 -  -4.6  -3.11361   AAACCGTAACACATA      CAGACTTCATTC AAGAAAAA GAATAAAATCTG       CTGGCGCTTCCATTC  50 58
         sat NONE
        cysC 1173548 .. 1173563 -  -6.1  -5.95539   TGCTAAATAAAAAAA              CCCGA TCAATG TCGGG               TTTTTTAAATAATGC 100 30
HC660_RS05995 1171702 .. 1171722 - -11.9  -3.91144   GTCACATTCCACAAA            CAACTGCCT GTT AGGCAGCTG            TTTCTTGAATTATTG  93 195
HC660_RS05985 NONE
HC660_RS05980 1169126 .. 1169147 -    -8  -5.22312   ATTCATATCAAAAAA           GCAAGGAC AATTTA GCCCTTGC            TTTCTGTCTTTTCAT 100 15
HC660_RS05960 1164115 .. 1164139 -    -5  -5.55664   TCAGCACCAAAAAAA         CTGCATTCCCC GCCA GGTGA-TGCAG          CAATTCGGCTATACA  93 331
HC660_RS05945 1160903 .. 1160932 - -13.7  -4.96501   TTGTAGAAAAATAAA       GAAAAAGCGGTGC CGAA GCACCGCTTTTTT        ATTTGCGTCCCCGCT 100 24
HC660_RS05925 1155513 .. 1155529 -  -2.9  -5.16237   AATTTGACTAAAAAA              GCGACAA TTT TTGCTGC              GGTCTTTTTGACTTG  70 58
HC660_RS05920 1154975 .. 1154990 -  -7.5  -2.79492   GGGCCAAGCGGAAAT              GCGGC GATGCT GCCGC               TGTCCGCCTGCGTGA  62 279
HC660_RS05915 NONE
HC660_RS05910 1154286 .. 1154299 -  -3.7  -3.24747   CTTTCATATGATTAA               CGGCC AGGA GGCTG                GAGCGGAACCAATGA  49 8
HC660_RS05905 NONE
       gerPD NONE
HC660_RS05895 1153074 .. 1153088 -  -3.4  -2.78384   TCTCTGTTTATTATA               TGCCCG TGC CGGACG               ATTGTGAGTTTGGGG  44 6
HC660_RS05890 1152776 .. 1152829 - -11.5  -4.77896   TAATGAACGGAAAAA GAAA-AAATAAAAAGCAGCC-CTCT CCTTGC AGAGCGGCTGCTTTTTATCCGTTTC CAACCATATCCTGAT 100 15
HC660_RS05860 NONE
HC660_RS05855 1139540 .. 1139561 -  -5.8   -3.1634   TGTCAAAGGAGTGAA           GAGGGCTC TCATTT GACCCCTC            TCATGCTTCTGTTAC  57 37
HC660_RS05845 NONE
HC660_RS05840 1135103 .. 1135123 -  -8.4  -5.36441   TGTGTATAGAAAAAA            GAGGTTAT CATGT ATAACCTC            TTTTTCTATCAGGAA 100 130
HC660_RS05830 NONE
        ntdB NONE
        ntdC 1130702 .. 1130721 -  -8.6   -4.8048   CCCCTATATGAAAAA            GCAGGAAC ATAC ATTCCTGC             TTTTTCAGTAACTTA  88 54
        glcP 1129421 .. 1129437 -    -8  -5.24129   TCTCCTGATAAAAAA              GAGGAC ATTAA GTCCTC              TTCTTCCTTACGATA 100 61
HC660_RS05810 1128931 .. 1128952 -  -8.7  -4.86731   CGTTTTTAAATAAAA           GACACGCAC TGAG GTGCGTGTT            TTTCACGTTTCTTCT  91 28
HC660_RS05785 1124963 .. 1124975 -  -6.3  -2.86164   GGCGCAAGGAGGAGA                GATCA GAA TGATC                CGAAAGACTCATGGC  54 34
HC660_RS05780 NONE
HC660_RS05775 1123060 .. 1123080 -  -9.8  -5.95539   CGCTAAAGAAAAAAA            GCAATCTG TTGTC CAGATTGC            TTTTTTCTTGTTTAA 100 37
HC660_RS05765 1121631 .. 1121655 - -11.4  -4.52142   ATTAGAAAATAGAAA          GGAGCTGACC AAACA GGGCAGCTCC          TTCTAAAACGCTAGG 100 36
HC660_RS05755 1120496 .. 1120515 - -12.2  -5.32944   TGGATAATTAAAAAA            GCCAATCC TTAA GGATTGGC             TTATTCGCTCTGTTT 100 26
HC660_RS05745 1117968 .. 1117987 - -12.2  -5.64274   TTATTTATAAAAAAA            CCGTTCAG TTCA CTGAACGG             TTTAATCAAGGTCAA 100 27
       hemAT 1116523 .. 1116542 -  -7.8  -4.46835   AGAAGCGTAAATAAA            CCGGCC CTGCGTTC GGCCGG             TTTTTGATGATTATT  80 36
HC660_RS05735 NONE
HC660_RS05730 NONE
HC660_RS05725 NONE
HC660_RS05720 1112649 .. 1112666 - -11.3  -5.50774   GAGAATAAATAAAAA             GACAGGC AAAC GCCTGTC              TTTTTTTATTGAATA 100 31
        aprE 1108276 .. 1108301 -  -6.2   -5.5112   CCGATTAATAAAAAA         GAAGCAGG TATGGAGTGG CCTGCTTC          TTTTTTATCTTATTG  89 35
HC660_RS05690 1106412 .. 1106430 - -10.3  -4.43189   ATTAATGTGAGAAAA             GCGAAGC AGCGG GCTTCGC             TTTTTCATTTTTAAT  89 36
HC660_RS05665 1101962 .. 1101992 - -13.5   -3.5861   AGTTAGAAGAATGAA       GAAAATCTCACAC TATAT GCGTGAGATTTTC       GCCTCTTTACATATC 100 32
        gltT 1100400 .. 1100428 -  -9.5  -5.94597   CAAGATTAAAAAAAA        GCCTGTGGGGC GATAAGA ACCCCGCAGGC        TTTTTTGATTAACCG 100 34
HC660_RS05645 1098522 .. 1098549 -    -7   -5.4505   TGTTTCAATAAAAAA        TCCAAGC-AGCAG TAA CAGCCCGCTTGGA        AAAATATGAATGAAA  91 78
HC660_RS05635 1096610 .. 1096635 - -14.9   -4.8622   CTTCCTAATGAAAAA         GACCTTGTTTC TCAG GAAACAAGGTC          TTTTTTTATTTAACA 100 31
        hmoB 1087081 .. 1087099 - -14.6  -5.93809   TCGCCATAAAAAAAA             CTGCCGGA CAT TCCGGCAG             CTATTCGACAGCAAC 100 26
HC660_RS05595 1086720 .. 1086731 -  -2.2  -2.63079   CTGGGACAGAAGGTA                TCCG ATAG CAGA                 TATTACTTCAGATCA  40 89
HC660_RS05590 1085239 .. 1085251 -  -2.7  -2.74094   TTGTATAGAAAAAGT                CTGAA TAT TTCAA                CTGGTTGTGTTTCAA  42 37
HC660_RS05585 1083970 .. 1083994 - -12.9  -4.14345   GAATATTAAAGTAAA          CAGCCGGAG AGTAAAA CTCCGGCTG          TTTTTTTATGATAAA 100 31
HC660_RS05565 1080355 .. 1080373 -  -8.9  -5.88565   TTCACAATAAAAAAA             CCTCATC TTTAT GATGAGG             CTAAGCGTTTCGCAA 100 15
        serC NONE
HC660_RS05555 1078471 .. 1078492 - -12.3  -5.63517   CTTTTAAAGAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTCACATTT 100 39
HC660_RS05545 1077711 .. 1077735 - -12.2   -5.7946   TTGCGAATAAAAAAA          GTGCAGGTCA TGTTT TGACCCGCAC          TTTTTTCCTTTGAAT 100 47
HC660_RS05540 1076813 .. 1076849 -    -3  -4.91109   CTGGCAGCACAAAAA   GCGCAAGGATTTGTAAC CTTT GATA-AGCTCCTTGCGC    TTTTTGCCGGACAGC  70 144
HC660_RS05530 NONE
HC660_RS05525 1075557 .. 1075593 - -10.2   -5.1848   AATCAATGTAAAAAA   GCATAGCTGCCAG-TTC TAAC GAGGCGGGCAGCTATGC    TTTCTTTACTTTCCT 100 46
        prsA 1074179 .. 1074206 - -12.8    -5.626   CATCGCATAAAAAAA        GCTGCGCA-GCTC AGT GAGCCTGCACAGC        TTTTTTTTATTTAGA 100 32
HC660_RS05475 1065806 .. 1065830 -  -5.6  -4.59773   TTGGAGCGGGAAAAA          GCTATCCGCT GAAGA AGCGGCTGGC          ATGGGTCTCTTGGAT  74 298
HC660_RS05465 NONE
        khtT 1064235 .. 1064245 -  -5.4  -3.82946   CGACTTCAAACACAA                 GATG ATC CATC                 CGCAGATCACACGCC  62 32
        khtU 1062996 .. 1063017 - -14.5  -4.12397   TGAGAGAACGACAAA           GCAGCACTG ATCA CAGTGCTGC            TTTTTTTTATCCCCG 100 32
HC660_RS05440 1058928 .. 1058948 -  -9.8  -4.30978   GCTAATCTATCAAAA            TCCCTTCT GGATA AGAAGGGA            TTTTTTTATTCGTTC  86 39
HC660_RS05425 NONE
HC660_RS05420 1054602 .. 1054632 -    -2  -3.14998   CAGCGATGAATAAAC      TTCAAGCCCGCTTT TACAT AAAGCGGGC--AAA      TTAGGATGGCCACAG  43 26
HC660_RS05415 1054243 .. 1054263 - -11.2  -5.90231   AGAAACATAAAAAAA            GCTTAGCC GTTCA GGCTAAGC            TAATCGTAAATATGA 100 25
HC660_RS05410 1053804 .. 1053826 - -19.2  -4.40003   GGTGACAAATATAAA           GAAGGCGCGG AAA CCGCGCCTTC           TGTCAGCCATTTATT 100 47
HC660_RS05405 NONE
HC660_RS05400 1052923 .. 1052945 -  -9.2  -4.59109   CATAGCTTTCAAAAA           CCCAAGACAT CCA ATGTTTTGGG           TTTTTGTACGCATTA  88 38
HC660_RS05385 1048173 .. 1048193 - -13.3  -5.17576   TATGAATTTAAAAAA            GCGAGCACG TGG CGTGCTCAC            TTTACGATCAGAACC 100 22
        nhaC 1046676 .. 1046699 - -11.8  -5.37345   TTTAATGATAAAAAA          GAGC-CCGCTT TGC AAGCGGCGCTC          TTTTTATTTTTTTAC 100 29
HC660_RS05370 1044654 .. 1044678 -  -7.9  -5.24129   CTTGGGCATAAAAAA         GTGAGGCCGC AGATAA GCG-CCTCAC          TTTTTTATTCGTGAA 100 30
HC660_RS05350 NONE
HC660_RS05345 NONE
        crcB 1040360 .. 1040370 -    -4  -2.89971   TCACGACAGAGGACA                 TTCT TGA AGAA                 ATTGTCGGCGAGATC  46 408
HC660_RS05325 1036858 .. 1036883 -  -8.4  -3.51329   TATGTCCAATTAGAA         CCTTCACTCT ACAATG AGAATGAAGG          TAACACCTCCTGTTA  71 52
HC660_RS05320 1035486 .. 1035506 -  -7.6  -5.59534   AACCAGAATAAAAAA            GACACCTC AATAA AAGGTGTC            TTTTTCAAAATTATG 100 36
HC660_RS05315 1034397 .. 1034425 - -10.9  -5.74122   TATGATATAAAAAAA        GCAGCAGGAGTCC GAT GATCACCTGCTGC        TTTTTTTTGTGGTGT 100 41
        sigM NONE
HC660_RS05290 NONE
HC660_RS05285 1029405 .. 1029422 -  -8.4  -5.60993   GCTGTCATAAAAAAA             GACGCC GTTTCA GGCGTC              TTTTTTCTAAAAGCC 100 32
HC660_RS05275 1027422 .. 1027440 - -10.2  -4.83169   ATCCTTTTAGAAAAA             CAGGCTCC GCT GGGGCCTG             TTTTTTTGTATATTA  91 38
        citR 1021215 .. 1021231 - -12.3  -3.61646   AATTTTACAAAGTAA              CCCGTTC ATA GAACGGG              TTTTTTTCATTAGAC  90 65
HC660_RS05240 1018263 .. 1018282 - -12.2  -5.56673   ATTTATAAGAAAAAA            GGATGCAG CGAT CTGCATCC             TTTTTATTTTCCTGT 100 29
        nsrR 1016089 .. 1016112 -  -6.8  -5.68039   AAAGGCATAAAAAAA          GAAGGAATCA TCAA TTATTCCTTC           ATTTTCAAAAGCTGC 100 16
HC660_RS05225 1014483 .. 1014508 -  -7.6   -5.7946   TCTTTAATAAAAAAA         CTGTACAGCC GACAAA GGCCATACAG          TTTCATTTTTAGAAA 100 34
HC660_RS05215 1013680 .. 1013700 - -12.5  -3.97308   CGCAAATACAGGAAA            CCCCGGCGT CTA ACCCCGGGG            TTTGTTTTATGTGAG 100 32
HC660_RS05140  997596 ..  997617 -  -8.7  -5.26316   GTATTTCATAAAAAA           GCCGCAG GTCAATCT CTGCGGC            TTTTTTTCATGATAA 100 32
HC660_RS05125  992589 ..  992617 - -14.7  -2.62244   CGTTTGAAGAAAATG        CGGCATTGGATAG AAC CTATCCAATGCCT        TTTTTAATTAATGAA 100 33
HC660_RS05110  990268 ..  990301 -  -8.9   -5.9873   GCAGCATAAAAAAAA     TCCTTCAAACGTTCA TCAT TGAACGCAAGAAGGA      TTTTTTATGCTCACC 100 167
HC660_RS05090  984684 ..  984699 -  -7.5  -5.40072   GCCGCCGCAAAAAAA              GCGGG GCTGAA CCCGC               AGAAGCATACACTAA  95 252
HC660_RS05080  983397 ..  983428 - -16.8  -4.07568   GCTTTTTCTTTAAAA      TAAGAACTGCAGGC TTGC ACCTGCAGTTCTTA       TTATCAATTTATGCT 100 40
HC660_RS04985  966355 ..  966373 - -11.8  -5.08824   TTTTTATGTAAAAAA             GAACACGA ATC TCGTGTTC             TTTTACGTAAGCCAA 100 28
HC660_RS04975 NONE
HC660_RS04970  965333 ..  965358 - -10.5   -5.4505   GCTGGTAAGAAAAAA         CTCCGG-ACGAT TAC ATCGCGCCGGAG         TTTTTTTCATTTTTC 100 10
HC660_RS04935  958674 ..  958693 - -10.7  -5.10497   AATCTATGTAAAAAA            CCCGCTG AATAAA CAGCGGG             TTTTTTCTATGCGAT  93 40
HC660_RS04915  955239 ..  955251 -  -3.3  -3.08812   TCGGGTCTAAGAAAT                CGTTC AAT GATCG                TCACCTCCTGTTATT  46 16
HC660_RS04910 NONE
HC660_RS04905  953697 ..  953723 - -15.2  -5.62288   GCAATAAAATAAAAA         GGCGGTTTCTCA AAA TGAGAGACCGCC         TTTTTTTATGGTTTC 100 31
       spo0M  952527 ..  952551 - -10.1  -5.52384   TTTTTATTAAAAAAA          GGAGCCTAT GTTTATT ATAGGCTCC          TTTTTGTTATTTACT 100 36
HC660_RS04745  935937 ..  935981 -  -7.9  -5.55855   TTCAAAAAAAGAAAA CCATTAAAATAAGCTGACCGC AAA ACGGTCAGCTTATTTATTTCG ACATTTTCTTCTTAT 100 18
HC660_RS04730  933420 ..  933439 - -12.2  -5.07941   AAAAGTACACAAAAA            CAGGAGCT TATA AGCTCCTG             TCTGGGGATGTGCAA 100 43
HC660_RS04725  932157 ..  932174 -  -6.2  -5.60993   TTTTGTATAAAAAAA             CCCGGC ATATGA ACCGGG              CTACTCTTCTATTTC  89 26
HC660_RS04695  927502 ..  927522 -  -2.4  -4.56636   AAAAAGGAATTAAAA            CAGAGCGC GAGCA GCTCACTG            CATTTTTAGAAAGTG  61 283
HC660_RS04685  925451 ..  925474 - -14.6  -5.17054   ACAAGACGCAAAAAA          GCCCGGCTCT AAAT AGAGCCGAGC           TTTAATTTTTTCTGA 100 10
HC660_RS04655 NONE
HC660_RS04650  919105 ..  919134 - -12.2  -3.19602   GCTTTTACATTAACA       CAGCCTGCCG GCATAAAGTA CGGCAGGCTG        TTTTTTACACATTTG  87 30
HC660_RS04640  918528 ..  918547 - -12.2  -5.49809   TAAAGGGTAAAAAAA            CAGCTGCA CATG TGCAGCTG             TTCTTCTTTTACCGT 100 34
HC660_RS04620 NONE
HC660_RS04615 NONE
HC660_RS04610  914617 ..  914643 - -14.5  -5.03314   CCGAGCTGTAAAAAA         CCCCCTGTCTC AAGCA GAGACAAGGGG         TTTTTCATTAACGTT 100 33
HC660_RS04585  909756 ..  909779 -  -9.6  -5.46698   GGCAAAAGCAAAAAA          GACTCCGTCT AAAC AGACGGAGTT           CTTTTTTTATTTAGA 100 32
HC660_RS04575  906500 ..  906530 - -11.3  -5.37593   TGTCAAATGAAAAAA      GTCTG-CCT-CCGCA GTT TGCGGGAGGACAGAC      TTCGCCTGACATTAT 100 37
HC660_RS04570  904654 ..  904664 -  -4.6   -4.1964   TTGAAGACTCCAAAA                 CAGC GGA GCCG                 AGCGGTTCACTCGCG  64 232
HC660_RS04550  900917 ..  900938 - -12.3  -4.27316   GCTCCGAACGTAAAA           GCATCCGCC TCCG GGCAGATGC            TTTTTATCATTATAT  95 110
HC660_RS04485 NONE
HC660_RS04480 NONE
HC660_RS04475 NONE
HC660_RS04470 NONE
HC660_RS04465  882788 ..  882811 - -13.2  -5.34309   AGGATTAAACAAAAA          TGGCCCGCTT TCAT AAGCAGGCCA           TTTTGTTATGCTCGC 100 31
        corA  869880 ..  869898 -  -6.7  -5.45802   TTGCCAAAATAAAAA             GAACAGC TTCAC GCTGTCC             TCATTTAAAAATGTT  89 26
HC660_RS04400  868909 ..  868929 - -12.6  -4.56978   TTTGTAAACAAGAAA            GCCTCTCC GCAAT GGAGAGGC            TTCTTTCTATTTTTC 100 32
       yfkAB NONE
        mscC  865688 ..  865708 - -12.7   -5.7827   AAGATAAATAAAAAA            CTGATTCCA TTA TGGAATCAG            TTTTTTTATTGGGTT 100 31
HC660_RS04365  862380 ..  862414 - -18.8  -3.44051   CGGCTATCATTAGAA     CAAAAGCCTCCTGACA TCA TGTCAGGAGGCTTTTT     CTTATGAAGAGGAAG 100 27
HC660_RS04345  860111 ..  860133 -   -12  -5.88565   TCCATAATAAAAAAA           GACTTGCCGA ATG CCGGCAAGCC           CCATTATTTTCGAAG 100 29
HC660_RS04340  858711 ..  858733 - -12.7  -5.51353   GAAAAATAACAAAAA           CGGACGCCC TGCGG GGACGTCCG           TTTTTTCATGATCGC 100 31
HC660_RS04330  853532 ..  853559 - -12.8  -5.24531   AGTGGGTATAAAAAA        GAAAGCTGCTCG ATAA CGAGCAGCTTTT         TTTATGCCTGATTCG 100 27
        ltaS  843991 ..  844012 - -14.5  -5.19879   GGTGAAATAGAAAAA           GCAGAGAGG CTGG CCTCTCTGC            TTTTTTCTTATTTAT 100 33
         map NONE
HC660_RS04280  841293 ..  841310 - -14.1  -4.25053   TGACAATATAAAGAA             GCCGGGC ATAC GCCCGGC              TTAGGTGTTTTATTG 100 35
HC660_RS04275 NONE
HC660_RS04270  840729 ..  840752 -   -11   -5.4833   CGATTCAATAAAAAA          GCCGCGCA TCTAAACG TGCGCGGC           TTCACCATGTCAGGA 100 35
HC660_RS04260  839415 ..  839440 -  -4.8  -5.11033   GATAAGCTCAAAAAA        GTGGC-AT-CCG TTAT CGGTATGGCCAC         TGATTACAATGCGGA  79 302
HC660_RS04225 NONE
HC660_RS04220 NONE
HC660_RS04215 NONE
HC660_RS04210  828787 ..  828821 - -17.5    -3.889   TTCAAGCATATGAAA     CAAGAAACCTACTTT ATAAA AAAGTAGGTTTCTTG     TTGTGCTCAATGGAA 100 47
HC660_RS04185  821548 ..  821560 -  -4.1  -4.78326   TTTTAAATAAAGAAA                CAGAA GCC CTCTG                TTTTATGTTTTTTTG  68 28
HC660_RS04180  820462 ..  820484 - -12.8  -3.80855   GTTTGCAAAAACGAA           GAAGCAAGGA TTC TCCTCGCTTC           TCTTTTGTCCTACTT  95 35
HC660_RS04175 NONE
        yfmE NONE
        yfmF  817588 ..  817605 - -11.3  -5.61596   AGCCGCATAAAAAAA             GGAGAGG GTAT CCTCTCC              TTTTTCATCACGTCC 100 33
HC660_RS04160  816458 ..  816476 - -11.7  -4.41177   CATATAAACCCAAAA             GGAGGGC AAAAA GCCCTCC             CATTTTCATCTTCAG 100 37
HC660_RS04145  813031 ..  813050 -  -8.5  -5.16237   AATGGCAGTAAAAAA            CCCGCCC TTCAGC AGGCGGG             TTTTCTTCGGTTTAA  91 37
HC660_RS04135  811934 ..  811955 - -10.2  -4.10407   ACATTAATAACGAAA           GACACTGC GCATAT GCAGTGTC            TTTTTTAATCATGGA  85 30
HC660_RS04100  803518 ..  803556 -  -7.2  -5.46698   GCCAAAACGAAAAAA   GCCGGCGGATTGGACGTT TAA AATGTCCGCACCGACGGC   TTATCATTATTTGTT  91 32
HC660_RS04095  802735 ..  802745 -  -6.8  -3.17075   CCTTCTGGAAGGGAA                 GCAG CAC CTGC                 CGCTTAACAGTTGAT  60 29
HC660_RS04090  801378 ..  801397 -   -15  -5.14965   AGCTTGATTAAAAAA            CCCCTGCC GCCC GGCAGGGG             TTTTTTCAGCTATGC 100 31
HC660_RS04050  789490 ..  789520 -  -4.1  -4.83169   ACTGTTTTAGAAAAA       GAGAGAATGTT ATATTCTGA ATCATTCTCTC       TTTTTATTTATTTAA  68 37
HC660_RS04035  785817 ..  785851 - -11.5  -2.53164   GCAGTGATGATTAAT     CAGAAAGCGCCTGTC ATTGA GATAGGCGCTTTTTG     TGACGGTTGGCGTTT  80 168
        hmoA  782353 ..  782376 - -11.8  -5.52384   TTTTCATGAAAAAAA          GAGCTTGCGGC ACA GCC-CAAGCTC          TTTTCCGTTATTGAT 100 33
HC660_RS03860  750319 ..  750341 - -17.8  -4.67353   TGATCGATCTAAAAA           GACCTTCGGC TCT GCCGAAGGTC           TTCTTTTTATCTATT 100 32
HC660_RS03815  742134 ..  742144 -  -2.6  -2.55392   AATGCATTTAATTCA                 TTTT CCA AAAA                 GAATCAACCTCCAGC  41 29
HC660_RS03810 NONE
HC660_RS03805 NONE
HC660_RS03800  740636 ..  740661 -  -6.9   -4.3534   TCTTAATTATCAAAA         TAGCTCAGC AGAGAAGG GCTGAGCCA          TTTTTGATTTATAGA  76 34
HC660_RS03795  740097 ..  740122 -  -4.7  -5.24129   TTGGTTTATAAAAAA         TAGCTCAGC AAAGTAGG GCTGAGCTT          AATTATAGACCGAGG  79 28
HC660_RS03790 NONE
HC660_RS03780 NONE
HC660_RS03775  737670 ..  737689 - -13.6  -4.03995   TTCTTCAGAAAAAGA            GACGCAGC CTAA GCTGCGTC             TTGTCCTTAACCAAG 100 32
HC660_RS03770  737221 ..  737246 - -12.7    -3.551   CTTGAACTTAGAGAA         GGCAACTAACCC TTG GGGTT-GTTGCC         TTTTTTGATTGTTAT  95 112
HC660_RS03700  719093 ..  719121 - -11.1  -4.87893   AACGCTAATGAAAAA       GCAGCTCTCCTC ATTGCA GAGG-GAGCTGC        TTTTTTTATGATCAA  93 37
        opuE  713957 ..  713979 - -14.2  -4.44461   AACAAGGGCACAAAA           GCCACCAAGC AGC GCTTGATGGC           TTTTTGATTATTTTT 100 33
HC660_RS03675  713154 ..  713180 - -17.4  -5.32944   TCTAGAACGAAAAAA         GCCAATGGGACA TAA TGCCCCATTGGC         TTTTATAATGTATCG 100 28
HC660_RS03630  701756 ..  701781 -  -7.6  -5.63517   CTTCCAAATAAAAAA        CCG-CCCT-GCC GTTT GGCTAGGGGCGG         TTTTTTTTATGAAAC 100 32
HC660_RS03610  698277 ..  698301 - -12.3  -5.42862   ATATTCTGAAAAAAA          GCTTGATCACA TTT TATGATCAAGC          TTTTTTCTTACGATT 100 33
HC660_RS03600  696429 ..  696448 - -10.7  -4.90217   TAAAGAGATGAAAAA            CCCGCAG ATTGTG CTGCGGG             TTTTTGTTATACCAA  93 32
        gabP  670364 ..  670382 - -10.3  -5.94713   AGGTGACAAAAAAAA             TCCTGCC GTTAA GGCAGGA             TATCGGGCTGTTGCT 100 15
HC660_RS03480  668714 ..  668728 -  -7.8  -5.76633   TCATAGATAAAAAAA               CCTGCC GGC AGCAGG               CAAGTTTTTTGGGTC 100 41
HC660_RS03475 NONE
HC660_RS03470 NONE
HC660_RS03465  666395 ..  666419 -  -5.7  -4.88222   ATCAAAAGTGAAAAA          GCCCGAAAC GTTTACA GTTTTGGGC          TTCATTATCTTGGCC  76 140
HC660_RS03460  666162 ..  666183 - -13.1  -5.17576   CATCAACTGAAAAAA           TCACTCAGC AAAT GCTGAGTGA            TTTTTTTAATGGACG 100 31
        bdhA  663154 ..  663177 - -11.8  -4.78753   CTAAGAGGAATAAAA          GAATCCGCAC TTGA ATGCGGATTC           TTTATTAGTATGTTT 100 39
HC660_RS03435  660057 ..  660101 -  -7.2   -2.6933   TTTGTGATAAAAATC GAGGATGTTTCTTAAAAGTC TCTTG GACTTTTGGGAGGCATCCTC TTTTTTCCTTTACTT  59 35
HC660_RS03415  653630 ..  653653 - -12.5  -4.26832   TAATAAGAAACGAAA          GGCCAACTG CGACTT CAGTTGGCC           TATTCTATTTATAAT 100 77
HC660_RS03395 NONE
HC660_RS03390  648674 ..  648699 - -10.6  -5.67967   ACCATCATAAAAAAA         TCCATTTCTC ATAGAA GAGAAATGGA          TTTTCTTTATTTCTG 100 32
HC660_RS03365  644458 ..  644478 - -11.2  -4.83615   TACTGTGGATAAAAA            GCACCTCT AAAAA AGAGGTGC            TTGACTTTTTTAATC  91 35
HC660_RS03300  633904 ..  633929 - -16.3  -4.29106   TTTTACATTAATAAA         GGTTCTCAAGG ATAT CCTTGAGAACC          TTTTGCTCATCAAGC 100 35
        pbuE  625129 ..  625148 -  -8.6  -6.01369   TAAATAATAAAAAAA            TCCTCCCT TTAC AAGGAGGA             TTTTTTTACGGTATG 100 14
        phoB  621628 ..  621653 - -11.9  -3.57901   TCCATTAAAAAGAGA         GCCCGTTCCTT ATAC AAGCAACGGGC          CACCTTGTATTCTCT  90 40
HC660_RS03235  620873 ..  620889 -    -8  -5.84381   TCACCAATAAAAAAA              CCTTCC GTGTT GGAAGG              CAATCGTTAAAATTC 100 32
HC660_RS03210  614310 ..  614326 -    -8  -5.66868   AATTAATCAAAAAAA              CCTGAC GGCAT GTCAGG              TTTTTTTTGATCTCA 100 41
HC660_RS03190  611139 ..  611162 - -12.5  -4.64766   TGCACATTTGAAAAA          CCTCCCAAC ATATAA GTTGGGAGG           TTCTTGTTATCCTTG 100 32
HC660_RS03185 NONE
HC660_RS03180  609916 ..  609940 - -14.4  -5.10154   ATCTAAAATGAAAAA          GCTCCCAAGA GTCAT TCTTGGGAGC          TTTGTATTATTTCCA 100 32
HC660_RS03160  605646 ..  605667 -  -8.7  -5.23316   CATGATACGAAAAAA           GCGGCTC AATTGTGG GAGCCGC            TTTTGTTTACGCCAT 100 42
HC660_RS03155  604079 ..  604108 - -16.5  -5.28481   TATTCAATTAAAAAA       GCTCCTGCTCTCA TTTC TGAGGGCAGGAGC        TGTAAGAGGGTTATT 100 36
       abc-f  602108 ..  602132 - -14.4   -4.7416   CGAAAACTTGAAAAA          TACCAAGGGC GAACA GCCCTTGGTA          TCCCTTACACACTAT 100 37
HC660_RS03100  593841 ..  593862 -  -7.4  -4.56367   CATCTTAGAAAGAAA           CATACCAA ATCATA TTGGTATG            TTTTTTTGTTCATGC  79 148
HC660_RS03075  586883 ..  586904 -    -3  -5.00895   TGCATGATATAAAAA           GCATACCA AGAACA TTGTATGC            TTTTTCATCTCCGTG  67 103
HC660_RS03045  580966 ..  580994 -   -14  -4.41348   CTCGGCCGAAACAAA        GATACCAAGGGT TGTAG ACCCCTGGTATC        TTTTAATGTTCTCTT 100 141
HC660_RS03035  578668 ..  578709 -  -8.7  -4.88405   AAGTTCCAAACAAAA GAACAAAACAGCGGGTCAC AAAT GCTTCCCACTGTTTTGTAC  GTTACTTAGCTGATA  91 31
HC660_RS03015  575874 ..  575888 -  -5.7  -3.27994   CGAATGCTAGATCAA               TCGAG TAAAT CTCGA               CAGCTTTTTGAAATG  56 96
HC660_RS03010  574965 ..  574994 - -12.2  -3.46271   ACAAAAAAATACAGA       GGGGCGGTTC AAGTATGAAA GAACCGCCCC        TTATTTTGTTTGGCA  90 66
HC660_RS02990  572430 ..  572486 - -22.7  -3.27489   CCAATTTGAAACATA TCATCCACCTCCATATATGGTAACCTT TTT AAGCTTACCATATATGGAGGTGGAATA TCAAATATTTAATAA 100 326
HC660_RS02985  571892 ..  571907 -  -4.8  -3.58533   GTAGAACGTCTGAAA              TGATTA GGTT TAATCA               TAACATTCTGAAAAA  57 85
HC660_RS02965  567822 ..  567861 -  -6.4  -5.60993   TGTGGCATAAAAAAA  GTGCTGACCCCTGC-ACAA CAC TTGTTGCGTGAGTCTGCAC  TTTTATTCTTCAAGA  90 76
HC660_RS02960  566479 ..  566499 -  -8.4  -5.73672   AAATAATTAAAAAAA            GCTTAATC TTTTT GATTAAGC            TTTTTTTAAAAGTTC 100 120
HC660_RS02940  561645 ..  561670 -  -6.2  -3.65046   GCCGCATCCCAATAA         TACCAAGGGT TTAACC ACCTTTGGTA          TTATTTTTTTATGCG  62 323
HC660_RS02925 NONE
HC660_RS02920  557201 ..  557213 -  -4.9  -3.57345   ATGAAAAAAAATAAT                TTTTC TTA GAAAA                TGTCCATCTTATATA  57 355
HC660_RS02910  556382 ..  556395 -  -2.5  -3.88062   ATATATTACATTAAA               TATAA AGCA TTATA                TGGTTATCAGCAAGA  53 60
HC660_RS02905 NONE
HC660_RS02900 NONE
HC660_RS02895  552063 ..  552094 - -13.3  -4.22309   ATAAAAGAATAAGAA      TTAAAGAGCAAAC TAGAGT GTTTGCTCTTTAA       TTTGTCTGATCATTA 100 38
HC660_RS02825  539571 ..  539584 -  -5.3  -3.05384   CCTCTTGGCATTGAA               CAAAC AACC GTTTG                TTCCTGCCTACCGGC  53 301
HC660_RS02785 NONE
HC660_RS02780 NONE
HC660_RS02775  533078 ..  533105 -  -6.6  -4.07568   CTTTTTTGGGGAAAA        TTAGT-TTGATTA CCC TAATCAATACTAA        AAAATTTGAGTTGTA  71 142
HC660_RS02760  531362 ..  531390 -  -3.7   -3.0579   AAAGGCTGTTAAAAG        GGTGCCTGGCTAA TGA CTAGCCAGGCTTT        TCTTTAGTCCTTCAA  48 29
HC660_RS02740 NONE
HC660_RS02735 NONE
HC660_RS02730 NONE
HC660_RS02725 NONE
HC660_RS02720  528142 ..  528156 -  -2.8  -4.06089   TATCCGAAAAAAAAC               CAGTTC TTT GAAATG               TTAGCCGCCACAGTA  55 67
        cmpA  526442 ..  526461 -  -6.4  -5.09259   TATGGTAAAATAAAA            GCACTGCT TACG AGCAGTGT             TTTTTCCTATAGAAA  83 13
HC660_RS02600  514837 ..  514857 -    -9  -4.81551   TACTCATATGAAAAA           GCGGACGGT TAAT ACCG-CCGC            TCTTTTTTTTGTACA  88 13
HC660_RS02570  507742 ..  507769 -  -9.3  -5.40279   GAAAACAAAATAAAA        CATGAACACGA TGTCAC TCATGTTCATG         TTCACGTAGAACCCG 100 69
        fbpA NONE
        fbpB  506358 ..  506373 -  -6.1  -5.68438   TCATTAAATAAAAAA              GAGCC TTTGCC GGCTC               TTTTTTATGTATTGT 100 30
        dctB  495366 ..  495382 -  -2.9  -4.36903   CGTATGAAAGATAAA              CGAAACA CAG CGTATCG              AGATGGGAACTATGA  60 35
HC660_RS02500  494441 ..  494470 -  -7.3   -5.3236   ACAACGCACAAAAAA       GGATAGATCAC GGTTAATG ATGATCTATCC        TTTTTATGATAGTGT  91 43
HC660_RS02470  491183 ..  491202 -    -5   -2.6583   CAGATCCGAAACGTA            CAAAAGCA CATT TGCTTATG             AGTCTGTTTTTATCT  49 21
HC660_RS02465  490818 ..  490844 - -11.7  -5.03994   GTCCATACATAAAAA         GACATCGTTTC TGTAT GAAACGATGCC         TCCTGAATAATCTAA 100 44
HC660_RS02460  489329 ..  489345 -  -9.4  -5.80951   AGCCAAAATAAAAAA              CCGGCT CTATC AGCCGG              TTTTTTTCTAACGAA 100 33
HC660_RS02455  488778 ..  488794 - -13.7  -5.44119   GTTATTCTAAAAAAA              CAGGGGC GAG GCCCCTG              TTTTTTGGATTTTAT 100 207
HC660_RS02400  473739 ..  473771 - -14.4  -5.09225   ATTGGATTTAAAAAA      GAAAACAGCCTGAA GCAGA TTCAAGCTGTTTTC      TTAATAGTGGCGGCA 100 63
HC660_RS02395  473216 ..  473237 - -10.2  -4.42386   TTTTGATGGAGAAAA           GCTGACCT GATGAA AGGTCAGC            TTTTTATTTATTCGG  89 33
HC660_RS02365  468611 ..  468632 - -11.6  -5.54907   TTCATAAAAGAAAAA           GCCCGTCA TTTATG TGACGGGC            TTTTTTGCGGTTGCG 100 13
HC660_RS02340  460742 ..  460761 - -10.6  -4.53303   CAGTTTCATAGAAAA            CGCGCCTG ATCA CTGGCGCG             TTTTTTTTATATGAA  89 423
HC660_RS02290  453407 ..  453432 -  -7.6  -5.85011   GAAAAATGAAAAAAA         CCCTTCACAA CCATTT TTGTGAGGGG          TTCTATTATTTCGTA 100 31
        ycnK NONE
HC660_RS02245 NONE
HC660_RS02240  444522 ..  444546 - -14.4  -5.75822   GATAAATCAAAAAAA          GCGATCCAGA ACTCA TCTGGATCGC          TTTTTCTTTAGGCGC 100 33
HC660_RS02215  438404 ..  438420 -  -5.1  -5.00884   AGCGCTGGTAAAAAA              TCCCC TGAACAG GGGGA              TTTTTTTATGTCCCA  74 31
HC660_RS02205 NONE
HC660_RS02200  436858 ..  436881 -   -16  -5.38054   CCGGACAAATAAAAA          GGCCTGCCGG AATT CCGACAGGCC           GGGTGAGGCTTATTT 100 35
HC660_RS02195  435865 ..  435875 -    -4  -2.57354   TTAAGTAATTAACAG                 TGTT TTT AACA                 TAGAAATAGGCTGTG  45 0
HC660_RS02190  434374 ..  434399 - -11.9  -5.13016   AAGTAAAACGAAAAA         GAGCCTCCGCTC TCA AAGCGG-GGCTC         TTTTTTTATAGGATC 100 39
HC660_RS02165  428965 ..  428980 -  -7.5  -4.73682   GCGGACAATATAAAA              GGCGG GCTCTG CCGCC               CGCTTTTATGTATAG  84 42
HC660_RS02155  428553 ..  428584 -  -7.2  -4.41348   TTTCTTCTAAAGAAA      CAGCGACGCAGGAT ATGG ATCTTACGGCGCCG       CCTGATTCATGGAGA  78 51
HC660_RS02130 NONE
HC660_RS02125  422528 ..  422552 -  -8.5  -5.42164   CAGAAACAATAAAAA          GAGCGGAGG GATGCAG CCGCCGCTC          TTTTACTGTTCACAT 100 98
HC660_RS02105  418175 ..  418192 -  -2.6  -4.63486   ATCGTCTGAACAAAA             GCGCCT CGCTCT AGGGGC              TCTTTTTGTTCGATT  62 18
HC660_RS02095  414623 ..  414645 - -10.6  -5.17744   ATAGACGAATAAAAA           TCCCGCAG GGCTGAT CTGCGGGA           TTTTCTTTATTATAG  93 35
HC660_RS02065  409904 ..  409919 -  -3.4  -3.14344   CACTTTTCTGATTAA              TTTTAT TGAA ATAAAA               AAATAGCTTACAAAT  46 101
        tcyA NONE
        tcyB NONE
        tcyC  407593 ..  407615 - -11.3   -5.7946   GGCTCAATAAAAAAA          CAGGGCCGCC GGCA GGCG-CCCTG           TTTTGGATTTTATAA 100 35
HC660_RS02045  406812 ..  406834 - -10.6  -5.46698   GTGAAAAGCAAAAAA           CCGGACAAAT GTA ATTGGTCCGG           TTTTTGTGTATCAGT 100 44
HC660_RS02040 NONE
HC660_RS02035 NONE
HC660_RS02030  403845 ..  403857 -  -6.3   -4.3179   GGAAAAAATCAGAAA                TTCCT ATA AGGAA                CGGTCCCTCAGGCTT  73 311
HC660_RS02020 NONE
HC660_RS02015  401139 ..  401162 - -12.6  -3.76781   AAATATCTCATTAAA          TAAAAGAGGG AACA CCCTCTTTTA           AGTTTGTCGTTTTCC  95 23
        hxlA  371778 ..  371790 -  -6.3  -2.55351   CGTTTTCATATGAAT                TATCC TTG GGATA                TAAGCTGTTTCATTT  53 12
        hxlB  371183 ..  371203 - -14.7  -4.89233   GAGGAATATCAAAAA            CCGGCCTGA TCT CCAGGCCGG            TTATGTGACGCTATT 100 36
HC660_RS01970  369327 ..  369341 -  -2.2  -3.44487   TAGCAGATCGAAATA               TTCATT TTT AATAAA               ATAACGTTATCAAAT  46 59
HC660_RS01965 NONE
HC660_RS01960  368294 ..  368319 -  -9.8  -3.75733   GAAAATATATAAAGA         GTCCCTGAGAG TATTC CTCTCAGGG-C         TTTTCATTAGACGGA  81 32
HC660_RS01920 NONE
HC660_RS01915  362585 ..  362604 -   -10  -4.90136   AATTAATAGGAAAAA            GCCGTCTCC TGC GGAG-CGGC            TTTTTTTAATGAAAC  93 47
HC660_RS01880 NONE
HC660_RS01875  351152 ..  351164 -  -3.5  -4.19276   CGAAAATTTCTAAAA                TTTTT ATG AAAAA                TTTAAATAGGTCTGA  57 27
        nasD NONE
        nirD  348246 ..  348266 - -12.7  -3.93769   ACTGTAAAAAATGAA            GGATCACTT TGA AAGTGATCC            GGTCTTTGATCAATA 100 35
        cobA  346742 ..  346758 - -10.9  -5.72622   TTCATAAATAAAAAA              GCCCTTT GGA AAAGGGC              TGTTCATCAGCTGTG 100 32
HC660_RS01850  344594 ..  344607 -  -5.3  -3.02434   CTGAAGAAAAGACGA               TTGTG CTGT CACAA                TAAAACCTCCGCTCA  53 121
HC660_RS01845  343721 ..  343741 -  -4.7  -3.25881   AGACGAAACATCCAA            TCACCCCTT TAC AAGTAGTGA            TCCCGCTAAGACGAT  54 5
HC660_RS01840  342827 ..  342850 - -12.6  -5.88476   AAAAGAAATAAAAAA          GAAACCAGTA CTTG TACTGGTTTC           GTCTTCAATTAAAAG 100 34
HC660_RS01790  332211 ..  332230 -  -8.6  -5.05601   TATGATACATAAAAA            GACCCTTC GATC GAAGAGTC             AGCGGGAAAAAACAG  91 24
HC660_RS01785  331502 ..  331532 - -15.7  -2.90309   GTGGAAATAACATGA       TAAAAAGCCCACT CTCGT AGTGGGCTTTTTA       TTTATTGATTCCTTT 100 74
HC660_RS01770  328097 ..  328124 - -11.2  -4.93316   GAACAAGATGAAAAA        GAGTGGCCGGCA GATA TGCCGGCCGATC         CAGAGCATTATAAGT 100 380
HC660_RS01750  324796 ..  324818 - -16.4  -5.47159   GTTTAATAGAAAAAA           GCAGTACACC CAG GGTGTACTGC           TTTTTCATTAATTTG 100 33
HC660_RS01725  318681 ..  318700 - -13.6  -4.42287   GAAATAATGAAGAAA            GCAGCCTG TTCG CAGGCTGC             TTTTTTGATTTAAGA 100 35
HC660_RS01650  302864 ..  302889 - -14.9  -5.63236   AGGTAAAAATAAAAA         GCAGTTTTTCC TTCA GGAAAAACTGC          TTTTTTTATAGAAAT 100 31
HC660_RS01615  295616 ..  295632 -  -4.3  -4.10934   ACAATCAACCATAAA              CCGGATG TTT CAGCCGA              CGAAGCGAGAGAAGC  61 186
HC660_RS01595  291400 ..  291433 - -14.1  -3.36515   CGGGATTTTTAAATA     GAAAAGGAAATAGCC CTGG GGCTATTTCCTTTTG      ATGTTTATTCTTTAA 100 30
HC660_RS01575 NONE
HC660_RS01570  286589 ..  286613 - -15.9  -5.86976   TGACAAAACAAAAAA          CCTTGAAAAGC CAA GCTTTTCAAGG          TTTTTTATTTTTGGA 100 30
HC660_RS01560  284844 ..  284878 - -14.6  -4.10331   CGAACTAATGAGAAA     CATAACCTTGAAGAAT CCT ATTCTTCAAGGTTATT     CTGCTTTCAGCACAA 100 21
HC660_RS01545 NONE
      lmr(B)  280585 ..  280608 - -14.6  -5.29782   TATAGGCATAAAAAA          CCCCCTGACC TCAA GATCAGGGGG           TTTTCTTATTAATCA 100 34
         pcp  278659 ..  278686 - -12.7  -3.10343   AGACTGACCAGTGAA        GCGGC-CGCCGC TTAGT GCAGCGCGCCGC        CGGGTGACTTCGTAT  91 9
HC660_RS01500  273654 ..  273676 - -15.6  -4.38154   AGACGTTTTATAAAA           GGCCGATGCT GTC AGCACCGGCC           TTTTGATTATGAATC 100 32
HC660_RS01420 NONE
HC660_RS01415  254804 ..  254832 - -11.9  -4.11938   CAAACGAATGATAAA        GGTGTTCAGAT TCCATTG ATCTGAACACC        TTCTGCATGCATTAC  95 37
        mmuM  253692 ..  253716 -  -6.5   -5.4505   CTTCCTAATAAAAAA          TCTCATGTC AGCGGGG GACACGAGA          TTCCGGCAAGCCGGC  89 75
        mmuP  252207 ..  252228 - -14.5  -5.01497   ATGAGGATAGAAAAA           GAACCTGCC TTGG GGCAGGTTC            TTTTATTTTGAATGG 100 28
        nagB NONE
HC660_RS01380  246941 ..  246960 - -10.7  -4.57073   TATGTTGGCTAAAAA            GTCCCCC GCACCA GGGGGAC             TTTTTTACTTCATGT  89 30
HC660_RS01375  245551 ..  245575 -   -13  -3.81258   TGAATAATATGGAAA          GAACACCTCT TATGC AGAGGTGTTC          TTTTTTTACATGCTT  95 31
HC660_RS01310 NONE
HC660_RS01305  233101 ..  233130 -  -7.9  -4.91712   TGTAAGTGAGAAAAA       GCATCTCTGGAGA GGGT TATTCAGAGATGC        TTTTTTTGTATTTTT  86 12
        glpT  228883 ..  228893 -  -2.4  -3.71848   CCTCCTTATGAACAA                 GCAG TAA CAGC                 TTTTATGTTAGATAA  50 90
HC660_RS01280  227950 ..  227973 - -12.6  -4.95806   AAATGATGAGAAAAA          GCATTGAATC CTAG GATTCAATGC           TTTTTTTGTAGTCTT 100 12
HC660_RS01265  223941 ..  223964 - -11.1  -4.81359   AAGGTAAATATAAAA          GCTCTCTTC CTTTTC GAAGAGAGC           TTTTTTGATTACTTC  91 34
      blaOXA  221680 ..  221703 -  -9.6  -3.14944   GAGCATGACATTTAA          GAGCCCTG TGCGTTTG CAGGGCTC           ATTCATTTATGAAGT  74 32
HC660_RS01230  217174 ..  217202 -  -6.7  -5.67063   CTTAGCATAAAAAAA        GAGCCGGATCA TGGAATC TGAGCCAGCTC        AGTATGACATTAAAA  90 35
HC660_RS01225  216242 ..  216257 -  -3.2  -3.87994   AGTCACCGCTACAAA              CGCCGT AGCT ACAGCA               GCAGTTAATTCAAAA  55 75
HC660_RS01085 NONE
HC660_RS01080 NONE
        murQ NONE
HC660_RS01070 NONE
HC660_RS01065 NONE
       pbp4b NONE
HC660_RS01055 NONE
HC660_RS01050  184917 ..  184941 - -12.2  -4.96848   TTTTGTATATAAAAA         CCCTTG-CCGC AAGA GCGGGCAAGGG          AAAATGATCAAGCTT 100 88
HC660_RS01045  183200 ..  183216 -    -3  -2.95102   ACGCCATGGACAAAT              TCCATA TTTAT CATGGA              CTATCGCCGGATAGC  43 19
        feuA NONE
HC660_RS01035 NONE
HC660_RS01030 NONE
HC660_RS01025  179387 ..  179406 -  -7.2  -5.54894   AAGGCATGAAAAAAA            CCGCTC-AT ATG ATAGAGCGG            TTTTTTCCGTATAGC  93 10
        pdaB  159488 ..  159502 -  -2.8  -3.41164   TATAAAACAAAAGCA               GTCCTC AAA GAAAAC               GTTTGTGTCATCTTT  46 187
HC660_RS00925  158366 ..  158397 -  -6.5  -5.19879   GTGCAAATATAAAAA      GGCGAACCGGGAT TTTTTG ATCCCGGCTTCCC       TTTACTCACCTTCTT  88 27
        abrB   44506 ..   44529 -  -9.7  -6.13503   CAGCAATAAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTGTAAAAA 100 45
HC660_RS00115   24922 ..   24961 -  -3.8  -4.87893   AATTTGAATGAAAAA  CGC-CTCCTTTCATA TCGCTACAATG TATGAAAGGAAAGCG  CTAATCATGTTTGTT  71 30
HC660_RS00110   23608 ..   23632 -  -2.9  -5.52384   CCCCTATGAAAAAAA         GACGTTTCCA AATTAA CGGAA-CGTC          TTTTTGACAACTTGA  80 13
HC660_RS00105 NONE
HC660_RS00100   22227 ..   22251 - -11.6  -5.36965   TAATATCATAAAAAA          GTGAATCTCA GGTCA TGAGATTCAC          TTTTTTTTCGTTTCA 100 22
HC660_RS00065   14557 ..   14575 - -14.6  -4.21768   CAAGCAAGGGTAAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTATACA 100 34
