locus-tag class description ABE28_RS00015 PF14175 YaaC-like Protein ABE28_RS00020 PF00478 IMP dehydrogenase / GMP reductase domain ABE28_RS00020 PF00571 CBS domain ABE28_RS00025 PF00768 D-alanyl-D-alanine carboxypeptidase ABE28_RS00025 PF07943 Penicillin-binding protein 5, C-terminal domain ABE28_RS00030 PF02403 Seryl-tRNA synthetase N-terminal domain ABE28_RS00030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABE28_RS00040 PF01712 Deoxynucleoside kinase ABE28_RS00045 PF01712 Deoxynucleoside kinase ABE28_RS00050 PF00857 Isochorismatase family ABE28_RS00055 PF14437 MafB19-like deaminase ABE28_RS00065 PF12169 DNA polymerase III subunits gamma and tau domain III ABE28_RS00070 PF02575 YbaB/EbfC DNA-binding family ABE28_RS00075 PF02132 RecR protein ABE28_RS00075 PF13662 Toprim domain ABE28_RS00080 PF10704 Protein of unknown function (DUF2508) ABE28_RS00085 PF07441 SigmaK-factor processing regulatory protein BofA ABE28_RS00105 PF10764 Inhibitor of sigma-G Gin ABE28_RS00110 PF01276 Orn/Lys/Arg decarboxylase, major domain ABE28_RS00110 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ABE28_RS00115 PF02223 Thymidylate kinase ABE28_RS00120 PF06153 Cyclic-di-AMP receptor ABE28_RS00125 PF03885 Protein of unknown function (DUF327) ABE28_RS00130 PF09115 DNA polymerase III, delta subunit, C terminal ABE28_RS00135 PF04468 PSP1 C-terminal conserved region ABE28_RS00140 PF06156 Initiation control protein YabA ABE28_RS00145 PF05175 Methyltransferase small domain ABE28_RS00150 PF01541 GIY-YIG catalytic domain ABE28_RS00155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABE28_RS00160 PF18277 AbrB C-terminal domain ABE28_RS00160 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABE28_RS00165 PF08264 Anticodon-binding domain of tRNA ABE28_RS00165 PF01588 Putative tRNA binding domain ABE28_RS00165 PF09334 tRNA synthetases class I (M) ABE28_RS00170 PF01026 TatD related DNase ABE28_RS00175 PF07501 G5 domain ABE28_RS00175 PF03990 G5-linked-Ubiquitin-like domain ABE28_RS00175 PF06725 3D domain ABE28_RS00180 PF13331 Domain of unknown function (DUF4093) ABE28_RS00180 PF13662 Toprim domain ABE28_RS00185 PF00398 Ribosomal RNA adenine dimethylase ABE28_RS00190 PF05582 YabG peptidase U57 ABE28_RS00195 PF06257 Biofilm formation stimulator VEG ABE28_RS00200 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABE28_RS00205 PF08544 GHMP kinases C terminal ABE28_RS00205 PF00288 GHMP kinases N terminal domain ABE28_RS00210 PF09182 Bacterial purine repressor, N-terminal ABE28_RS00210 PF00156 Phosphoribosyl transferase domain ABE28_RS00215 PF01042 Endoribonuclease L-PSP ABE28_RS00220 PF04026 SpoVG ABE28_RS00225 PF00132 Bacterial transferase hexapeptide (six repeats) ABE28_RS00225 PF00483 Nucleotidyl transferase ABE28_RS00230 PF14572 Phosphoribosyl synthetase-associated domain ABE28_RS00230 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABE28_RS00240 PF09084 NMT1/THI5 like ABE28_RS00245 PF00296 Luciferase-like monooxygenase ABE28_RS00250 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS00255 PF00005 ABC transporter ABE28_RS00260 PF14693 Ribosomal protein TL5, C-terminal domain ABE28_RS00260 PF01386 Ribosomal L25p family ABE28_RS00265 PF01195 Peptidyl-tRNA hydrolase ABE28_RS00270 PF10955 Protein of unknown function (DUF2757) ABE28_RS00275 PF02559 CarD-like/TRCF domain ABE28_RS00275 PF00270 DEAD/DEAH box helicase ABE28_RS00275 PF00271 Helicase conserved C-terminal domain ABE28_RS00275 PF03461 TRCF domain ABE28_RS00275 PF17757 UvrB interaction domain ABE28_RS00280 PF15714 Stage V sporulation protein T C-terminal, transcription factor ABE28_RS00280 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABE28_RS00285 PF14667 Polysaccharide biosynthesis C-terminal domain ABE28_RS00285 PF01943 Polysaccharide biosynthesis protein ABE28_RS00290 PF03819 MazG nucleotide pyrophosphohydrolase domain ABE28_RS00290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABE28_RS00295 PF01479 S4 domain ABE28_RS00300 PF07873 YabP family ABE28_RS00305 PF09578 Spore cortex protein YabQ (Spore_YabQ) ABE28_RS00310 PF04977 Septum formation initiator ABE28_RS00315 PF00575 S1 RNA binding domain ABE28_RS00330 PF07228 Stage II sporulation protein E (SpoIIE) ABE28_RS00335 PF00092 von Willebrand factor type A domain ABE28_RS00340 PF00069 Protein kinase domain ABE28_RS00345 PF09179 TilS substrate binding domain ABE28_RS00345 PF11734 TilS substrate C-terminal domain ABE28_RS00345 PF01171 PP-loop family ABE28_RS00350 PF00156 Phosphoribosyl transferase domain ABE28_RS00355 PF00004 ATPase family associated with various cellular activities (AAA) ABE28_RS00355 PF17862 AAA+ lid domain ABE28_RS00355 PF06480 FtsH Extracellular ABE28_RS00355 PF01434 Peptidase family M41 ABE28_RS00360 PF03309 Type III pantothenate kinase ABE28_RS00365 PF01430 Hsp33 protein ABE28_RS00370 PF13145 PPIC-type PPIASE domain ABE28_RS00375 PF00291 Pyridoxal-phosphate dependent enzyme ABE28_RS00380 PF00809 Pterin binding enzyme ABE28_RS00385 PF02152 Dihydroneopterin aldolase ABE28_RS00390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABE28_RS00395 PF01381 Helix-turn-helix ABE28_RS00400 PF01207 Dihydrouridine synthase (Dus) ABE28_RS00405 PF00152 tRNA synthetases class II (D, K and N) ABE28_RS00405 PF01336 OB-fold nucleic acid binding domain ABE28_RS00425 PF05848 CtsR N-terminal HTH domain ABE28_RS00425 PF17727 CtsR C-terminal dimerization domain ABE28_RS00430 PF02151 UvrB/uvrC motif ABE28_RS00435 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain ABE28_RS00440 PF02861 Clp amino terminal domain, pathogenicity island component ABE28_RS00440 PF10431 C-terminal, D2-small domain, of ClpB protein ABE28_RS00440 PF00004 ATPase family associated with various cellular activities (AAA) ABE28_RS00440 PF07724 AAA domain (Cdc48 subfamily) ABE28_RS00440 PF17871 AAA lid domain ABE28_RS00445 PF18073 Rubredoxin metal binding domain ABE28_RS00450 PF10635 DisA bacterial checkpoint controller linker region ABE28_RS00450 PF02457 DisA bacterial checkpoint controller nucleotide-binding ABE28_RS00460 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABE28_RS00465 PF02542 YgbB family ABE28_RS00470 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABE28_RS00475 PF00132 Bacterial transferase hexapeptide (six repeats) ABE28_RS00475 PF06426 Serine acetyltransferase, N-terminal ABE28_RS00480 PF09190 DALR domain ABE28_RS00480 PF01406 tRNA synthetases class I (C) catalytic domain ABE28_RS00485 PF00636 Ribonuclease III domain ABE28_RS00490 PF00588 SpoU rRNA Methylase family ABE28_RS00490 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABE28_RS00495 PF05991 YacP-like NYN domain ABE28_RS00500 PF08281 Sigma-70, region 4 ABE28_RS00500 PF04542 Sigma-70 region 2 ABE28_RS00505 PF00471 Ribosomal protein L33 ABE28_RS00510 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABE28_RS00515 PF00467 KOW motif ABE28_RS00515 PF02357 Transcription termination factor nusG ABE28_RS00520 PF03946 Ribosomal protein L11, N-terminal domain ABE28_RS00520 PF00298 Ribosomal protein L11, RNA binding domain ABE28_RS00525 PF00687 Ribosomal protein L1p/L10e family ABE28_RS00530 PF00466 Ribosomal protein L10 ABE28_RS00535 PF16320 Ribosomal protein L7/L12 dimerisation domain ABE28_RS00535 PF00542 Ribosomal protein L7/L12 C-terminal domain ABE28_RS00540 PF05175 Methyltransferase small domain ABE28_RS00545 PF04565 RNA polymerase Rpb2, domain 3 ABE28_RS00545 PF04561 RNA polymerase Rpb2, domain 2 ABE28_RS00545 PF10385 RNA polymerase beta subunit external 1 domain ABE28_RS00545 PF00562 RNA polymerase Rpb2, domain 6 ABE28_RS00545 PF04560 RNA polymerase Rpb2, domain 7 ABE28_RS00545 PF04563 RNA polymerase beta subunit ABE28_RS00550 PF04998 RNA polymerase Rpb1, domain 5 ABE28_RS00550 PF05000 RNA polymerase Rpb1, domain 4 ABE28_RS00550 PF04997 RNA polymerase Rpb1, domain 1 ABE28_RS00550 PF04983 RNA polymerase Rpb1, domain 3 ABE28_RS00550 PF00623 RNA polymerase Rpb1, domain 2 ABE28_RS00555 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ABE28_RS00560 PF00164 Ribosomal protein S12/S23 ABE28_RS00565 PF00177 Ribosomal protein S7p/S5e ABE28_RS00570 PF03144 Elongation factor Tu domain 2 ABE28_RS00570 PF00009 Elongation factor Tu GTP binding domain ABE28_RS00570 PF03764 Elongation factor G, domain IV ABE28_RS00570 PF14492 Elongation Factor G, domain II ABE28_RS00570 PF00679 Elongation factor G C-terminus ABE28_RS00575 PF03144 Elongation factor Tu domain 2 ABE28_RS00575 PF03143 Elongation factor Tu C-terminal domain ABE28_RS00575 PF00009 Elongation factor Tu GTP binding domain ABE28_RS00580 PF00338 Ribosomal protein S10p/S20e ABE28_RS00585 PF00297 Ribosomal protein L3 ABE28_RS00590 PF00573 Ribosomal protein L4/L1 family ABE28_RS00595 PF00276 Ribosomal protein L23 ABE28_RS00600 PF03947 Ribosomal Proteins L2, C-terminal domain ABE28_RS00600 PF00181 Ribosomal Proteins L2, RNA binding domain ABE28_RS00605 PF00203 Ribosomal protein S19 ABE28_RS00610 PF00237 Ribosomal protein L22p/L17e ABE28_RS00615 PF00189 Ribosomal protein S3, C-terminal domain ABE28_RS00615 PF07650 KH domain ABE28_RS00620 PF00252 Ribosomal protein L16p/L10e ABE28_RS00625 PF00831 Ribosomal L29 protein ABE28_RS00630 PF00366 Ribosomal protein S17 ABE28_RS00635 PF00238 Ribosomal protein L14p/L23e ABE28_RS00640 PF00467 KOW motif ABE28_RS00640 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABE28_RS00645 PF00281 Ribosomal protein L5 ABE28_RS00645 PF00673 ribosomal L5P family C-terminus ABE28_RS00650 PF00253 Ribosomal protein S14p/S29e ABE28_RS00655 PF00410 Ribosomal protein S8 ABE28_RS00660 PF00347 Ribosomal protein L6 ABE28_RS00665 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABE28_RS00670 PF03719 Ribosomal protein S5, C-terminal domain ABE28_RS00670 PF00333 Ribosomal protein S5, N-terminal domain ABE28_RS00675 PF00327 Ribosomal protein L30p/L7e ABE28_RS00680 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABE28_RS00685 PF00344 SecY translocase ABE28_RS00690 PF05191 Adenylate kinase, active site lid ABE28_RS00695 PF01176 Translation initiation factor 1A / IF-1 ABE28_RS00700 PF00444 Ribosomal protein L36 ABE28_RS00705 PF00416 Ribosomal protein S13/S18 ABE28_RS00710 PF00411 Ribosomal protein S11 ABE28_RS00715 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABE28_RS00715 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABE28_RS00715 PF01000 RNA polymerase Rpb3/RpoA insert domain ABE28_RS00720 PF01196 Ribosomal protein L17 ABE28_RS00725 PF00005 ABC transporter ABE28_RS00730 PF00005 ABC transporter ABE28_RS00735 PF02361 Cobalt transport protein ABE28_RS00740 PF01416 tRNA pseudouridine synthase ABE28_RS00745 PF00572 Ribosomal protein L13 ABE28_RS00750 PF00380 Ribosomal protein S9/S16 ABE28_RS00755 PF07690 Major Facilitator Superfamily ABE28_RS00775 PF01520 N-acetylmuramoyl-L-alanine amidase ABE28_RS00780 PF10609 NUBPL iron-transfer P-loop NTPase ABE28_RS00785 PF17898 Spore germination GerD central core domain ABE28_RS00790 PF14089 KinB-signalling pathway activation in sporulation ABE28_RS00795 PF01522 Polysaccharide deacetylase ABE28_RS00865 PF00491 Arginase family ABE28_RS00875 PF04542 Sigma-70 region 2 ABE28_RS00875 PF08281 Sigma-70, region 4 ABE28_RS00880 PF13490 Putative zinc-finger ABE28_RS00885 PF02457 DisA bacterial checkpoint controller nucleotide-binding ABE28_RS00890 PF07949 YbbR-like protein ABE28_RS00895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABE28_RS00895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABE28_RS00895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABE28_RS00895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABE28_RS00900 PF01380 SIS domain ABE28_RS00930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS00930 PF00672 HAMP domain ABE28_RS00930 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS00935 PF00072 Response regulator receiver domain ABE28_RS00935 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS00940 PF00664 ABC transporter transmembrane region ABE28_RS00940 PF00005 ABC transporter ABE28_RS00945 PF00285 Citrate synthase, C-terminal domain ABE28_RS00950 PF03972 MmgE/PrpD family ABE28_RS00960 PF01820 D-ala D-ala ligase N-terminus ABE28_RS00960 PF07478 D-ala D-ala ligase C-terminus ABE28_RS00965 PF02743 Cache domain ABE28_RS00965 PF00672 HAMP domain ABE28_RS00965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS00970 PF00313 'Cold-shock' DNA-binding domain ABE28_RS00975 PF01022 Bacterial regulatory protein, arsR family ABE28_RS00980 PF00403 Heavy-metal-associated domain ABE28_RS00985 PF04542 Sigma-70 region 2 ABE28_RS00985 PF08281 Sigma-70, region 4 ABE28_RS00995 PF01926 50S ribosome-binding GTPase ABE28_RS00995 PF16360 GTP-binding GTPase Middle Region ABE28_RS00995 PF13167 GTP-binding GTPase N-terminal ABE28_RS01005 PF00665 Integrase core domain ABE28_RS01005 PF13276 HTH-like domain ABE28_RS01005 PF13333 Integrase core domain ABE28_RS01010 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS01010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABE28_RS01015 PF01180 Dihydroorotate dehydrogenase ABE28_RS01020 PF01979 Amidohydrolase family ABE28_RS01025 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABE28_RS01035 PF17853 GGDEF-like domain ABE28_RS01035 PF05651 Putative sugar diacid recognition ABE28_RS01035 PF13556 PucR C-terminal helix-turn-helix domain ABE28_RS01040 PF00781 Diacylglycerol kinase catalytic domain ABE28_RS01045 PF00999 Sodium/hydrogen exchanger family ABE28_RS01050 PF01593 Flavin containing amine oxidoreductase ABE28_RS01060 PF00005 ABC transporter ABE28_RS01060 PF08402 TOBE domain ABE28_RS01065 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS01070 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS01075 PF13416 Bacterial extracellular solute-binding protein ABE28_RS01095 PF03176 MMPL family ABE28_RS01100 PF13580 SIS domain ABE28_RS01105 PF07702 UTRA domain ABE28_RS01105 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS01110 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ABE28_RS01115 PF01979 Amidohydrolase family ABE28_RS01120 PF02378 Phosphotransferase system, EIIC ABE28_RS01120 PF00367 phosphotransferase system, EIIB ABE28_RS01120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABE28_RS01125 PF00005 ABC transporter ABE28_RS01130 PF01032 FecCD transport family ABE28_RS01135 PF01032 FecCD transport family ABE28_RS01140 PF01497 Periplasmic binding protein ABE28_RS01145 PF00756 Putative esterase ABE28_RS01150 PF00106 short chain dehydrogenase ABE28_RS01155 PF00425 chorismate binding enzyme ABE28_RS01160 PF00501 AMP-binding enzyme ABE28_RS01160 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS01165 PF00550 Phosphopantetheine attachment site ABE28_RS01165 PF00857 Isochorismatase family ABE28_RS01170 PF00975 Thioesterase domain ABE28_RS01170 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS01170 PF00668 Condensation domain ABE28_RS01170 PF00550 Phosphopantetheine attachment site ABE28_RS01170 PF00501 AMP-binding enzyme ABE28_RS01175 PF03621 MbtH-like protein ABE28_RS01180 PF07690 Major Facilitator Superfamily ABE28_RS01185 PF01648 4'-phosphopantetheinyl transferase superfamily ABE28_RS01190 PF07690 Major Facilitator Superfamily ABE28_RS01200 PF17862 AAA+ lid domain ABE28_RS01200 PF00004 ATPase family associated with various cellular activities (AAA) ABE28_RS01200 PF01434 Peptidase family M41 ABE28_RS01205 PF01327 Polypeptide deformylase ABE28_RS01215 PF07690 Major Facilitator Superfamily ABE28_RS01220 PF01047 MarR family ABE28_RS01225 PF09375 Imelysin ABE28_RS01230 PF04261 Dyp-type peroxidase family ABE28_RS01230 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABE28_RS01235 PF03239 Iron permease FTR1 family ABE28_RS01240 PF13411 MerR HTH family regulatory protein ABE28_RS01245 PF00571 CBS domain ABE28_RS01245 PF03471 Transporter associated domain ABE28_RS01245 PF01595 Cyclin M transmembrane N-terminal domain ABE28_RS01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS01250 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS01250 PF01627 Hpt domain ABE28_RS01250 PF00072 Response regulator receiver domain ABE28_RS01255 PF03705 CheR methyltransferase, all-alpha domain ABE28_RS01255 PF01739 CheR methyltransferase, SAM binding domain ABE28_RS01260 PF07228 Stage II sporulation protein E (SpoIIE) ABE28_RS01260 PF13426 PAS domain ABE28_RS01270 PF12146 Serine aminopeptidase, S33 ABE28_RS01300 PF00589 Phage integrase family ABE28_RS01300 PF02899 Phage integrase, N-terminal SAM-like domain ABE28_RS01305 PF00873 AcrB/AcrD/AcrF family ABE28_RS01310 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS01315 PF00781 Diacylglycerol kinase catalytic domain ABE28_RS01330 PF00375 Sodium:dicarboxylate symporter family ABE28_RS01340 PF01820 D-ala D-ala ligase N-terminus ABE28_RS01340 PF07478 D-ala D-ala ligase C-terminus ABE28_RS01345 PF02875 Mur ligase family, glutamate ligase domain ABE28_RS01345 PF01225 Mur ligase family, catalytic domain ABE28_RS01345 PF08245 Mur ligase middle domain ABE28_RS01355 PF00270 DEAD/DEAH box helicase ABE28_RS01355 PF00271 Helicase conserved C-terminal domain ABE28_RS01360 PF03703 Bacterial PH domain ABE28_RS01365 PF03703 Bacterial PH domain ABE28_RS01370 PF01694 Rhomboid family ABE28_RS01375 PF01648 4'-phosphopantetheinyl transferase superfamily ABE28_RS01385 PF01168 Alanine racemase, N-terminal domain ABE28_RS01385 PF00842 Alanine racemase, C-terminal domain ABE28_RS01390 PF01402 Ribbon-helix-helix protein, copG family ABE28_RS01395 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ABE28_RS01400 PF01740 STAS domain ABE28_RS01400 PF08678 Rsbr N terminal ABE28_RS01405 PF01740 STAS domain ABE28_RS01410 PF13581 Histidine kinase-like ATPase domain ABE28_RS01415 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain ABE28_RS01415 PF07228 Stage II sporulation protein E (SpoIIE) ABE28_RS01420 PF01740 STAS domain ABE28_RS01425 PF13581 Histidine kinase-like ATPase domain ABE28_RS01430 PF04539 Sigma-70 region 3 ABE28_RS01430 PF04545 Sigma-70, region 4 ABE28_RS01430 PF04542 Sigma-70 region 2 ABE28_RS01435 PF07228 Stage II sporulation protein E (SpoIIE) ABE28_RS01440 PF00575 S1 RNA binding domain ABE28_RS01440 PF09371 Tex-like protein N-terminal domain ABE28_RS01440 PF16921 Tex protein YqgF-like domain ABE28_RS01440 PF17674 HHH domain ABE28_RS01445 PF10263 SprT-like family ABE28_RS01525 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABE28_RS01530 PF00814 Glycoprotease family ABE28_RS01535 PF00583 Acetyltransferase (GNAT) family ABE28_RS01540 PF00814 Glycoprotease family ABE28_RS01545 PF12848 ABC transporter ABE28_RS01545 PF16326 ABC transporter C-terminal domain ABE28_RS01545 PF00005 ABC transporter ABE28_RS01550 PF01967 MoaC family ABE28_RS01555 PF02629 CoA binding domain ABE28_RS01555 PF06971 Putative DNA-binding protein N-terminus ABE28_RS01565 PF02517 CPBP intramembrane metalloprotease ABE28_RS01570 PF00166 Chaperonin 10 Kd subunit ABE28_RS01575 PF00118 TCP-1/cpn60 chaperonin family ABE28_RS01600 PF13378 Enolase C-terminal domain-like ABE28_RS01600 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABE28_RS01605 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain ABE28_RS01605 PF00877 NlpC/P60 family ABE28_RS01615 PF01965 DJ-1/PfpI family ABE28_RS01625 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS01625 PF01627 Hpt domain ABE28_RS01625 PF00072 Response regulator receiver domain ABE28_RS01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS01635 PF02447 GntP family permease ABE28_RS01640 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABE28_RS01645 PF17042 Nucleotide-binding C-terminal domain ABE28_RS01645 PF07005 Sugar-binding N-terminal domain ABE28_RS01650 PF08220 DeoR-like helix-turn-helix domain ABE28_RS01650 PF00455 DeoR C terminal sensor domain ABE28_RS01655 PF07729 FCD domain ABE28_RS01655 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS01660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABE28_RS01660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABE28_RS01665 PF02447 GntP family permease ABE28_RS01670 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ABE28_RS01670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABE28_RS01680 PF00144 Beta-lactamase ABE28_RS01685 PF01497 Periplasmic binding protein ABE28_RS01690 PF01032 FecCD transport family ABE28_RS01695 PF01032 FecCD transport family ABE28_RS01700 PF09021 HutP ABE28_RS01705 PF00221 Aromatic amino acid lyase ABE28_RS01710 PF00324 Amino acid permease ABE28_RS01720 PF00005 ABC transporter ABE28_RS01720 PF00571 CBS domain ABE28_RS01725 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABE28_RS01735 PF01156 Inosine-uridine preferring nucleoside hydrolase ABE28_RS01740 PF06013 Proteins of 100 residues with WXG ABE28_RS01750 PF10140 WXG100 protein secretion system (Wss), protein YukC ABE28_RS01755 PF01580 FtsK/SpoIIIE family ABE28_RS01755 PF12538 DNA transporter ABE28_RS01765 PF17355 Family of unknown function (DUF5383) ABE28_RS01770 PF00872 Transposase, Mutator family ABE28_RS01775 PF01497 Periplasmic binding protein ABE28_RS01785 PF17863 AAA lid domain ABE28_RS01785 PF07726 ATPase family associated with various cellular activities (AAA) ABE28_RS01790 PF01882 Protein of unknown function DUF58 ABE28_RS01795 PF01841 Transglutaminase-like superfamily ABE28_RS01795 PF11992 Domain of unknown function (DUF3488) ABE28_RS01795 PF13559 Domain of unknown function (DUF4129) ABE28_RS01800 PF02540 NAD synthase ABE28_RS01800 PF00958 GMP synthase C terminal domain ABE28_RS01800 PF00117 Glutamine amidotransferase class-I ABE28_RS01805 PF00860 Permease family ABE28_RS01810 PF03123 CAT RNA binding domain ABE28_RS01810 PF00874 PRD domain ABE28_RS01815 PF02378 Phosphotransferase system, EIIC ABE28_RS01815 PF00367 phosphotransferase system, EIIB ABE28_RS01815 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABE28_RS01835 PF07690 Major Facilitator Superfamily ABE28_RS01840 PF01487 Type I 3-dehydroquinase ABE28_RS01845 PF08501 Shikimate dehydrogenase substrate binding domain ABE28_RS01845 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABE28_RS01850 PF07690 Major Facilitator Superfamily ABE28_RS01855 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS01860 PF01202 Shikimate kinase ABE28_RS01880 PF14044 NETI protein ABE28_RS01885 PF00731 AIR carboxylase ABE28_RS01890 PF02222 ATP-grasp domain ABE28_RS01890 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABE28_RS01895 PF00206 Lyase ABE28_RS01895 PF10397 Adenylosuccinate lyase C-terminus ABE28_RS01900 PF01259 SAICAR synthetase ABE28_RS01905 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ABE28_RS01915 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABE28_RS01915 PF00586 AIR synthase related protein, N-terminal domain ABE28_RS01915 PF02769 AIR synthase related protein, C-terminal domain ABE28_RS01920 PF00156 Phosphoribosyl transferase domain ABE28_RS01925 PF02769 AIR synthase related protein, C-terminal domain ABE28_RS01925 PF00586 AIR synthase related protein, N-terminal domain ABE28_RS01930 PF00551 Formyl transferase ABE28_RS01935 PF01808 AICARFT/IMPCHase bienzyme ABE28_RS01935 PF02142 MGS-like domain ABE28_RS01940 PF02844 Phosphoribosylglycinamide synthetase, N domain ABE28_RS01940 PF02843 Phosphoribosylglycinamide synthetase, C domain ABE28_RS01940 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABE28_RS01945 PF11127 Protein of unknown function (DUF2892) ABE28_RS01950 PF01979 Amidohydrolase family ABE28_RS01950 PF13382 Adenine deaminase C-terminal domain ABE28_RS01955 PF17479 Protein of unknown function (DUF3048) C-terminal domain ABE28_RS01955 PF11258 Protein of unknown function (DUF3048) N-terminal domain ABE28_RS01960 PF01371 Trp repressor protein ABE28_RS01965 PF01884 PcrB family ABE28_RS01970 PF00580 UvrD/REP helicase N-terminal domain ABE28_RS01970 PF13361 UvrD-like helicase C-terminal domain ABE28_RS01975 PF01653 NAD-dependent DNA ligase adenylation domain ABE28_RS01975 PF12826 Helix-hairpin-helix motif ABE28_RS01975 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABE28_RS01975 PF03120 NAD-dependent DNA ligase OB-fold domain ABE28_RS01975 PF00533 BRCA1 C Terminus (BRCT) domain ABE28_RS01980 PF07537 CamS sex pheromone cAM373 precursor ABE28_RS01985 PF02686 Glu-tRNAGln amidotransferase C subunit ABE28_RS01990 PF01425 Amidase ABE28_RS01995 PF02934 GatB/GatE catalytic domain ABE28_RS01995 PF02637 GatB domain ABE28_RS02000 PF04542 Sigma-70 region 2 ABE28_RS02000 PF08281 Sigma-70, region 4 ABE28_RS02020 PF00781 Diacylglycerol kinase catalytic domain ABE28_RS02025 PF00583 Acetyltransferase (GNAT) family ABE28_RS02035 PF01938 TRAM domain ABE28_RS02035 PF05958 tRNA (Uracil-5-)-methyltransferase ABE28_RS02040 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABE28_RS02040 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABE28_RS02045 PF04239 Protein of unknown function (DUF421) ABE28_RS02055 PF07451 Stage V sporulation protein AD (SpoVAD) ABE28_RS02085 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein ABE28_RS02090 PF05816 Toxic anion resistance protein (TelA) ABE28_RS02095 PF00881 Nitroreductase family ABE28_RS02100 PF07516 SecA Wing and Scaffold domain ABE28_RS02100 PF07517 SecA DEAD-like domain ABE28_RS02100 PF02810 SEC-C motif ABE28_RS02100 PF01043 SecA preprotein cross-linking domain ABE28_RS02105 PF00082 Subtilase family ABE28_RS02110 PF07987 Domain of unkown function (DUF1775) ABE28_RS02115 PF04234 CopC domain ABE28_RS02115 PF05425 Copper resistance protein D ABE28_RS02115 PF13115 YtkA-like ABE28_RS02125 PF13426 PAS domain ABE28_RS02125 PF13188 PAS domain ABE28_RS02125 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS02125 PF00989 PAS fold ABE28_RS02130 PF09335 SNARE associated Golgi protein ABE28_RS02135 PF06177 QueT transporter ABE28_RS02140 PF04073 Aminoacyl-tRNA editing domain ABE28_RS02150 PF13031 Protein of unknown function (DUF3892) ABE28_RS02155 PF04389 Peptidase family M28 ABE28_RS02155 PF02225 PA domain ABE28_RS02170 PF14449 Pre-toxin TG ABE28_RS02170 PF14431 YwqJ-like deaminase ABE28_RS02170 PF04740 LXG domain of WXG superfamily ABE28_RS02185 PF04286 Protein of unknown function (DUF445) ABE28_RS02190 PF01758 Sodium Bile acid symporter family ABE28_RS02195 PF00072 Response regulator receiver domain ABE28_RS02195 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS02200 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS02200 PF00672 HAMP domain ABE28_RS02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS02205 PF02687 FtsX-like permease family ABE28_RS02210 PF00005 ABC transporter ABE28_RS02215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABE28_RS02215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABE28_RS02230 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS02235 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS02240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ABE28_RS02240 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS02250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABE28_RS02250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABE28_RS02255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABE28_RS02255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABE28_RS02265 PF01479 S4 domain ABE28_RS02265 PF00849 RNA pseudouridylate synthase ABE28_RS02270 PF00248 Aldo/keto reductase family ABE28_RS02285 PF00005 ABC transporter ABE28_RS02290 PF02653 Branched-chain amino acid transport system / permease component ABE28_RS02305 PF13180 PDZ domain ABE28_RS02315 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABE28_RS02320 PF00510 Cytochrome c oxidase subunit III ABE28_RS02325 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABE28_RS02330 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ABE28_RS02340 PF14489 QueF-like protein ABE28_RS02345 PF00696 Amino acid kinase family ABE28_RS02345 PF13840 ACT domain ABE28_RS02350 PF07730 Histidine kinase ABE28_RS02355 PF00072 Response regulator receiver domain ABE28_RS02355 PF00196 Bacterial regulatory proteins, luxR family ABE28_RS02360 PF00005 ABC transporter ABE28_RS02375 PF00881 Nitroreductase family ABE28_RS02380 PF00664 ABC transporter transmembrane region ABE28_RS02380 PF00005 ABC transporter ABE28_RS02385 PF00005 ABC transporter ABE28_RS02385 PF00664 ABC transporter transmembrane region ABE28_RS02390 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS02390 PF17932 Tetracyclin repressor-like, C-terminal domain ABE28_RS02395 PF07690 Major Facilitator Superfamily ABE28_RS02405 PF02554 Carbon starvation protein CstA ABE28_RS02405 PF13722 5TM C-terminal transporter carbon starvation CstA ABE28_RS02415 PF00909 Ammonium Transporter Family ABE28_RS02420 PF00543 Nitrogen regulatory protein P-II ABE28_RS02430 PF00072 Response regulator receiver domain ABE28_RS02430 PF04397 LytTr DNA-binding domain ABE28_RS02435 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABE28_RS02435 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABE28_RS02440 PF01594 AI-2E family transporter ABE28_RS02445 PF00171 Aldehyde dehydrogenase family ABE28_RS02450 PF00375 Sodium:dicarboxylate symporter family ABE28_RS02455 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABE28_RS02455 PF02558 Ketopantoate reductase PanE/ApbA ABE28_RS02460 PF06725 3D domain ABE28_RS02460 PF01476 LysM domain ABE28_RS02465 PF01546 Peptidase family M20/M25/M40 ABE28_RS02465 PF07687 Peptidase dimerisation domain ABE28_RS02470 PF11181 Heat induced stress protein YflT ABE28_RS02470 PF09557 Domain of unknown function (DUF2382) ABE28_RS02475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS02475 PF02743 Cache domain ABE28_RS02475 PF00672 HAMP domain ABE28_RS02490 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ABE28_RS02495 PF13419 Haloacid dehalogenase-like hydrolase ABE28_RS02505 PF00041 Fibronectin type III domain ABE28_RS02505 PF00704 Glycosyl hydrolases family 18 ABE28_RS02510 PF04963 Sigma-54 factor, core binding domain ABE28_RS02510 PF04552 Sigma-54, DNA binding domain ABE28_RS02510 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABE28_RS02515 PF00202 Aminotransferase class-III ABE28_RS02520 PF00171 Aldehyde dehydrogenase family ABE28_RS02525 PF00171 Aldehyde dehydrogenase family ABE28_RS02530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABE28_RS02530 PF00384 Molybdopterin oxidoreductase ABE28_RS02530 PF01568 Molydopterin dinucleotide binding domain ABE28_RS02535 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS02535 PF00989 PAS fold ABE28_RS02535 PF08447 PAS fold ABE28_RS02540 PF00271 Helicase conserved C-terminal domain ABE28_RS02540 PF00270 DEAD/DEAH box helicase ABE28_RS02545 PF13276 HTH-like domain ABE28_RS02545 PF13333 Integrase core domain ABE28_RS02545 PF00665 Integrase core domain ABE28_RS02555 PF01047 MarR family ABE28_RS02560 PF13673 Acetyltransferase (GNAT) domain ABE28_RS02570 PF01053 Cys/Met metabolism PLP-dependent enzyme ABE28_RS02580 PF00677 Lumazine binding domain ABE28_RS02585 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABE28_RS02585 PF00925 GTP cyclohydrolase II ABE28_RS02590 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABE28_RS02600 PF03631 Virulence factor BrkB ABE28_RS02620 PF01593 Flavin containing amine oxidoreductase ABE28_RS02625 PF00171 Aldehyde dehydrogenase family ABE28_RS02635 PF01593 Flavin containing amine oxidoreductase ABE28_RS02640 PF00535 Glycosyl transferase family 2 ABE28_RS02650 PF00999 Sodium/hydrogen exchanger family ABE28_RS02655 PF02080 TrkA-C domain ABE28_RS02660 PF00589 Phage integrase family ABE28_RS02670 PF05145 Transition state regulatory protein AbrB ABE28_RS02675 PF01618 MotA/TolQ/ExbB proton channel family ABE28_RS02680 PF00691 OmpA family ABE28_RS02680 PF13677 Membrane MotB of proton-channel complex MotA/MotB ABE28_RS02690 PF01965 DJ-1/PfpI family ABE28_RS02695 PF00557 Metallopeptidase family M24 ABE28_RS02700 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ABE28_RS02705 PF03454 MoeA C-terminal region (domain IV) ABE28_RS02705 PF00994 Probable molybdopterin binding domain ABE28_RS02705 PF03453 MoeA N-terminal region (domain I and II) ABE28_RS02710 PF06569 Protein of unknown function (DUF1128) ABE28_RS02720 PF03631 Virulence factor BrkB ABE28_RS02730 PF07690 Major Facilitator Superfamily ABE28_RS02735 PF01699 Sodium/calcium exchanger protein ABE28_RS02740 PF14167 YfkD-like protein ABE28_RS02745 PF04055 Radical SAM superfamily ABE28_RS02745 PF08756 YfkB-like domain ABE28_RS02755 PF05681 Fumarate hydratase (Fumerase) ABE28_RS02755 PF05683 Fumarase C-terminus ABE28_RS02770 PF01522 Polysaccharide deacetylase ABE28_RS02775 PF00730 HhH-GPD superfamily base excision DNA repair protein ABE28_RS02780 PF01938 TRAM domain ABE28_RS02780 PF05958 tRNA (Uracil-5-)-methyltransferase ABE28_RS02785 PF01207 Dihydrouridine synthase (Dus) ABE28_RS02790 PF07308 Protein of unknown function (DUF1456) ABE28_RS02795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABE28_RS02795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABE28_RS02805 PF03606 C4-dicarboxylate anaerobic carrier ABE28_RS02810 PF07687 Peptidase dimerisation domain ABE28_RS02810 PF01546 Peptidase family M20/M25/M40 ABE28_RS02815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS02815 PF02743 Cache domain ABE28_RS02815 PF00672 HAMP domain ABE28_RS02825 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABE28_RS02830 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS02835 PF00005 ABC transporter ABE28_RS02845 PF00480 ROK family ABE28_RS02845 PF01325 Iron dependent repressor, N-terminal DNA binding domain ABE28_RS02855 PF08402 TOBE domain ABE28_RS02855 PF00005 ABC transporter ABE28_RS02860 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS02865 PF14698 Argininosuccinate lyase C-terminal ABE28_RS02865 PF00206 Lyase ABE28_RS02870 PF00474 Sodium:solute symporter family ABE28_RS02880 PF00324 Amino acid permease ABE28_RS02885 PF00324 Amino acid permease ABE28_RS02890 PF10609 NUBPL iron-transfer P-loop NTPase ABE28_RS02895 PF02634 FdhD/NarQ family ABE28_RS02900 PF06463 Molybdenum Cofactor Synthesis C ABE28_RS02900 PF04055 Radical SAM superfamily ABE28_RS02905 PF01967 MoaC family ABE28_RS02910 PF00899 ThiF family ABE28_RS02915 PF00994 Probable molybdopterin binding domain ABE28_RS02915 PF03453 MoeA N-terminal region (domain I and II) ABE28_RS02915 PF03454 MoeA C-terminal region (domain IV) ABE28_RS02920 PF02391 MoaE protein ABE28_RS02925 PF02597 ThiS family ABE28_RS02930 PF00037 4Fe-4S binding domain ABE28_RS02930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABE28_RS02930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABE28_RS02930 PF01568 Molydopterin dinucleotide binding domain ABE28_RS02930 PF00384 Molybdopterin oxidoreductase ABE28_RS02935 PF07849 Protein of unknown function (DUF1641) ABE28_RS02940 PF06146 Phosphate-starvation-inducible E ABE28_RS02945 PF10057 Uncharacterized conserved protein (DUF2294) ABE28_RS02955 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS02965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABE28_RS02965 PF12838 4Fe-4S dicluster domain ABE28_RS02965 PF00384 Molybdopterin oxidoreductase ABE28_RS02965 PF01568 Molydopterin dinucleotide binding domain ABE28_RS02965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABE28_RS02980 PF03466 LysR substrate binding domain ABE28_RS02980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS02985 PF00296 Luciferase-like monooxygenase ABE28_RS02990 PF00296 Luciferase-like monooxygenase ABE28_RS02995 PF00462 Glutaredoxin ABE28_RS03000 PF00583 Acetyltransferase (GNAT) family ABE28_RS03005 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABE28_RS03010 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS03015 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS03020 PF00005 ABC transporter ABE28_RS03030 PF01546 Peptidase family M20/M25/M40 ABE28_RS03030 PF07687 Peptidase dimerisation domain ABE28_RS03040 PF06800 Sugar transport protein ABE28_RS03050 PF07690 Major Facilitator Superfamily ABE28_RS03055 PF00155 Aminotransferase class I and II ABE28_RS03060 PF01370 NAD dependent epimerase/dehydratase family ABE28_RS03065 PF00324 Amino acid permease ABE28_RS03075 PF02796 Helix-turn-helix domain of resolvase ABE28_RS03075 PF00239 Resolvase, N terminal domain ABE28_RS03115 PF10996 Beta-Casp domain ABE28_RS03115 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABE28_RS03115 PF00753 Metallo-beta-lactamase superfamily ABE28_RS03125 PF00772 DnaB-like helicase N terminal domain ABE28_RS03125 PF03796 DnaB-like helicase C terminal domain ABE28_RS03195 PF00574 Clp protease ABE28_RS03235 PF01464 Transglycosylase SLT domain ABE28_RS03350 PF00005 ABC transporter ABE28_RS03365 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS03365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS03370 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS03370 PF00072 Response regulator receiver domain ABE28_RS03375 PF00005 ABC transporter ABE28_RS03380 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS03385 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABE28_RS03395 PF14172 Domain of unknown function (DUF4309) ABE28_RS03405 PF08338 Domain of unknown function (DUF1731) ABE28_RS03405 PF01370 NAD dependent epimerase/dehydratase family ABE28_RS03410 PF00860 Permease family ABE28_RS03415 PF13556 PucR C-terminal helix-turn-helix domain ABE28_RS03415 PF07905 Purine catabolism regulatory protein-like family ABE28_RS03415 PF17853 GGDEF-like domain ABE28_RS03420 PF13556 PucR C-terminal helix-turn-helix domain ABE28_RS03420 PF17853 GGDEF-like domain ABE28_RS03425 PF01014 Uricase ABE28_RS03425 PF09349 OHCU decarboxylase ABE28_RS03430 PF09349 OHCU decarboxylase ABE28_RS03430 PF01014 Uricase ABE28_RS03435 PF00576 HIUase/Transthyretin family ABE28_RS03440 PF08534 Redoxin ABE28_RS03445 PF00194 Eukaryotic-type carbonic anhydrase ABE28_RS03460 PF01476 LysM domain ABE28_RS03460 PF00877 NlpC/P60 family ABE28_RS03475 PF03551 Transcriptional regulator PadR-like family ABE28_RS03490 PF01758 Sodium Bile acid symporter family ABE28_RS03495 PF07690 Major Facilitator Superfamily ABE28_RS03520 PF12728 Helix-turn-helix domain ABE28_RS03525 PF01594 AI-2E family transporter ABE28_RS03530 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABE28_RS03535 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS03540 PF00005 ABC transporter ABE28_RS03550 PF03466 LysR substrate binding domain ABE28_RS03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS03560 PF09278 MerR, DNA binding ABE28_RS03560 PF00376 MerR family regulatory protein ABE28_RS03565 PF00106 short chain dehydrogenase ABE28_RS03570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS03570 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS03570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS03575 PF00108 Thiolase, N-terminal domain ABE28_RS03575 PF02803 Thiolase, C-terminal domain ABE28_RS03580 PF00501 AMP-binding enzyme ABE28_RS03580 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS03585 PF14151 YfhD-like protein ABE28_RS03595 PF01370 NAD dependent epimerase/dehydratase family ABE28_RS03595 PF08338 Domain of unknown function (DUF1731) ABE28_RS03600 PF02631 RecX family ABE28_RS03605 PF08838 Protein of unknown function (DUF1811) ABE28_RS03615 PF14043 WVELL protein ABE28_RS03620 PF04307 LexA-binding, inner membrane-associated putative hydrolase ABE28_RS03625 PF14815 NUDIX domain ABE28_RS03625 PF00730 HhH-GPD superfamily base excision DNA repair protein ABE28_RS03650 PF14182 YgaB-like protein ABE28_RS03655 PF04167 Protein of unknown function (DUF402) ABE28_RS03660 PF00664 ABC transporter transmembrane region ABE28_RS03660 PF00005 ABC transporter ABE28_RS03665 PF00892 EamA-like transporter family ABE28_RS03675 PF03358 NADPH-dependent FMN reductase ABE28_RS03680 PF07690 Major Facilitator Superfamily ABE28_RS03690 PF01047 MarR family ABE28_RS03695 PF06081 Aromatic acid exporter family member 1 ABE28_RS03700 PF00310 Glutamine amidotransferases class-II ABE28_RS03700 PF01493 GXGXG motif ABE28_RS03700 PF04898 Glutamate synthase central domain ABE28_RS03700 PF01645 Conserved region in glutamate synthase ABE28_RS03705 PF00202 Aminotransferase class-III ABE28_RS03715 PF00005 ABC transporter ABE28_RS03725 PF00132 Bacterial transferase hexapeptide (six repeats) ABE28_RS03725 PF00101 Ribulose bisphosphate carboxylase, small chain ABE28_RS03735 PF00589 Phage integrase family ABE28_RS03745 PF00574 Clp protease ABE28_RS03750 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABE28_RS03755 PF09084 NMT1/THI5 like ABE28_RS03760 PF00005 ABC transporter ABE28_RS03765 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS03770 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS03775 PF03009 Glycerophosphoryl diester phosphodiesterase family ABE28_RS03780 PF00107 Zinc-binding dehydrogenase ABE28_RS03780 PF13823 Alcohol dehydrogenase GroES-associated ABE28_RS03780 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS03805 PF13419 Haloacid dehalogenase-like hydrolase ABE28_RS03810 PF13667 ThiC-associated domain ABE28_RS03810 PF01964 Radical SAM ThiC family ABE28_RS03820 PF02627 Carboxymuconolactone decarboxylase family ABE28_RS03835 PF00107 Zinc-binding dehydrogenase ABE28_RS03835 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS03855 PF07563 Protein of unknown function (DUF1541) ABE28_RS03870 PF00534 Glycosyl transferases group 1 ABE28_RS03905 PF00480 ROK family ABE28_RS03910 PF02614 Glucuronate isomerase ABE28_RS03915 PF02837 Glycosyl hydrolases family 2, sugar binding domain ABE28_RS03915 PF00703 Glycosyl hydrolases family 2 ABE28_RS03915 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ABE28_RS03920 PF02311 AraC-like ligand binding domain ABE28_RS03920 PF12833 Helix-turn-helix domain ABE28_RS03930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABE28_RS03930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABE28_RS03935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABE28_RS03935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABE28_RS03945 PF00106 short chain dehydrogenase ABE28_RS03950 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS03965 PF03845 Spore germination protein ABE28_RS03970 PF02447 GntP family permease ABE28_RS03985 PF03992 Antibiotic biosynthesis monooxygenase ABE28_RS03990 PF00158 Sigma-54 interaction domain ABE28_RS03990 PF13426 PAS domain ABE28_RS03990 PF02954 Bacterial regulatory protein, Fis family ABE28_RS03995 PF00491 Arginase family ABE28_RS04005 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS04010 PF07690 Major Facilitator Superfamily ABE28_RS04020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABE28_RS04055 PF01435 Peptidase family M48 ABE28_RS04060 PF07681 DoxX ABE28_RS04075 PF06039 Malate:quinone oxidoreductase (Mqo) ABE28_RS04085 PF05977 Transmembrane secretion effector ABE28_RS04090 PF00005 ABC transporter ABE28_RS04090 PF12848 ABC transporter ABE28_RS04095 PF01497 Periplasmic binding protein ABE28_RS04105 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABE28_RS04110 PF07729 FCD domain ABE28_RS04110 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS04115 PF00296 Luciferase-like monooxygenase ABE28_RS04125 PF12697 Alpha/beta hydrolase family ABE28_RS04130 PF00171 Aldehyde dehydrogenase family ABE28_RS04135 PF03358 NADPH-dependent FMN reductase ABE28_RS04140 PF01687 Riboflavin kinase ABE28_RS04145 PF00171 Aldehyde dehydrogenase family ABE28_RS04155 PF00550 Phosphopantetheine attachment site ABE28_RS04155 PF00857 Isochorismatase family ABE28_RS04160 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABE28_RS04165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS04165 PF03466 LysR substrate binding domain ABE28_RS04170 PF05145 Transition state regulatory protein AbrB ABE28_RS04175 PF06866 Protein of unknown function (DUF1256) ABE28_RS04180 PF03600 Citrate transporter ABE28_RS04185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS04185 PF03466 LysR substrate binding domain ABE28_RS04190 PF04303 PrpF protein ABE28_RS04195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABE28_RS04195 PF00205 Thiamine pyrophosphate enzyme, central domain ABE28_RS04195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABE28_RS04200 PF07690 Major Facilitator Superfamily ABE28_RS04230 PF00005 ABC transporter ABE28_RS04230 PF09383 NIL domain ABE28_RS04235 PF12911 N-terminal TM domain of oligopeptide transport permease C ABE28_RS04235 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS04240 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS04245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABE28_RS04255 PF00294 pfkB family carbohydrate kinase ABE28_RS04265 PF00294 pfkB family carbohydrate kinase ABE28_RS04270 PF04227 Indigoidine synthase A like protein ABE28_RS04275 PF07662 Na+ dependent nucleoside transporter C-terminus ABE28_RS04275 PF01773 Na+ dependent nucleoside transporter N-terminus ABE28_RS04280 PF01156 Inosine-uridine preferring nucleoside hydrolase ABE28_RS04285 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS04295 PF05504 Spore germination B3/ GerAC like, C-terminal ABE28_RS04310 PF00248 Aldo/keto reductase family ABE28_RS04315 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS04315 PF18665 Tetracyclin repressor-like, C-terminal domain ABE28_RS04320 PF00576 HIUase/Transthyretin family ABE28_RS04325 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS04325 PF00072 Response regulator receiver domain ABE28_RS04330 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS04330 PF16736 Single Cache-like ABE28_RS04330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS04330 PF00989 PAS fold ABE28_RS04335 PF17094 Uncharacterised protein family (UPF0715) ABE28_RS04350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABE28_RS04355 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABE28_RS04370 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS04375 PF03845 Spore germination protein ABE28_RS04385 PF00232 Glycosyl hydrolase family 1 ABE28_RS04390 PF02378 Phosphotransferase system, EIIC ABE28_RS04390 PF00367 phosphotransferase system, EIIB ABE28_RS04390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABE28_RS04395 PF00874 PRD domain ABE28_RS04395 PF03123 CAT RNA binding domain ABE28_RS04410 PF00158 Sigma-54 interaction domain ABE28_RS04420 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABE28_RS04435 PF00111 2Fe-2S iron-sulfur cluster binding domain ABE28_RS04435 PF00970 Oxidoreductase FAD-binding domain ABE28_RS04435 PF00175 Oxidoreductase NAD-binding domain ABE28_RS04440 PF00171 Aldehyde dehydrogenase family ABE28_RS04445 PF13393 Histidyl-tRNA synthetase ABE28_RS04445 PF03129 Anticodon binding domain ABE28_RS04450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS04450 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS04450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS04455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABE28_RS04455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABE28_RS04460 PF00171 Aldehyde dehydrogenase family ABE28_RS04465 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS04470 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS04475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABE28_RS04485 PF08239 Bacterial SH3 domain ABE28_RS04485 PF01476 LysM domain ABE28_RS04485 PF00877 NlpC/P60 family ABE28_RS04490 PF03845 Spore germination protein ABE28_RS04500 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS04510 PF09323 Domain of unknown function (DUF1980) ABE28_RS04515 PF03773 Predicted permease ABE28_RS04530 PF16884 N-terminal domain of oxidoreductase ABE28_RS04530 PF00107 Zinc-binding dehydrogenase ABE28_RS04550 PF08331 Domain of unknown function (DUF1730) ABE28_RS04555 PF12671 Putative amidase domain ABE28_RS04560 PF00588 SpoU rRNA Methylase family ABE28_RS04565 PF00881 Nitroreductase family ABE28_RS04570 PF00005 ABC transporter ABE28_RS04575 PF01497 Periplasmic binding protein ABE28_RS04580 PF01032 FecCD transport family ABE28_RS04585 PF01032 FecCD transport family ABE28_RS04590 PF06798 PrkA serine protein kinase C-terminal domain ABE28_RS04590 PF08298 PrkA AAA domain ABE28_RS04605 PF04285 Protein of unknown function (DUF444) ABE28_RS04625 PF03808 Glycosyl transferase WecB/TagA/CpsF family ABE28_RS04630 PF02397 Bacterial sugar transferase ABE28_RS04640 PF13807 G-rich domain on putative tyrosine kinase ABE28_RS04640 PF02706 Chain length determinant protein ABE28_RS04645 PF13614 AAA domain ABE28_RS04655 PF00534 Glycosyl transferases group 1 ABE28_RS04685 PF07690 Major Facilitator Superfamily ABE28_RS04690 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS04690 PF07729 FCD domain ABE28_RS04705 PF13520 Amino acid permease ABE28_RS04710 PF06800 Sugar transport protein ABE28_RS04725 PF00890 FAD binding domain ABE28_RS04725 PF03358 NADPH-dependent FMN reductase ABE28_RS04725 PF04205 FMN-binding domain ABE28_RS04730 PF10502 Signal peptidase, peptidase S26 ABE28_RS04735 PF00158 Sigma-54 interaction domain ABE28_RS04740 PF00205 Thiamine pyrophosphate enzyme, central domain ABE28_RS04740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABE28_RS04740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABE28_RS04755 PF01522 Polysaccharide deacetylase ABE28_RS04760 PF09335 SNARE associated Golgi protein ABE28_RS04765 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase ABE28_RS04770 PF02245 Methylpurine-DNA glycosylase (MPG) ABE28_RS04775 PF07690 Major Facilitator Superfamily ABE28_RS04780 PF03807 NADP oxidoreductase coenzyme F420-dependent ABE28_RS04780 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABE28_RS04785 PF01565 FAD binding domain ABE28_RS04785 PF02913 FAD linked oxidases, C-terminal domain ABE28_RS04790 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABE28_RS04790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABE28_RS04795 PF12787 EcsC protein family ABE28_RS04800 PF13556 PucR C-terminal helix-turn-helix domain ABE28_RS04800 PF06018 CodY GAF-like domain ABE28_RS04800 PF17853 GGDEF-like domain ABE28_RS04805 PF01384 Phosphate transporter family ABE28_RS04810 PF01865 Protein of unknown function DUF47 ABE28_RS04815 PF01384 Phosphate transporter family ABE28_RS04820 PF00248 Aldo/keto reductase family ABE28_RS04825 PF04226 Transglycosylase associated protein ABE28_RS04830 PF01565 FAD binding domain ABE28_RS04830 PF08031 Berberine and berberine like ABE28_RS04835 PF00849 RNA pseudouridylate synthase ABE28_RS04835 PF01479 S4 domain ABE28_RS04840 PF17326 Family of unknown function (DUF5365) ABE28_RS04845 PF00085 Thioredoxin ABE28_RS04850 PF00583 Acetyltransferase (GNAT) family ABE28_RS04850 PF00795 Carbon-nitrogen hydrolase ABE28_RS04855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABE28_RS04855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABE28_RS04855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABE28_RS04855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABE28_RS04860 PF03358 NADPH-dependent FMN reductase ABE28_RS04865 PF14148 YhdB-like protein ABE28_RS04870 PF00246 Zinc carboxypeptidase ABE28_RS04870 PF01476 LysM domain ABE28_RS04880 PF04055 Radical SAM superfamily ABE28_RS04880 PF06463 Molybdenum Cofactor Synthesis C ABE28_RS04890 PF07687 Peptidase dimerisation domain ABE28_RS04890 PF01546 Peptidase family M20/M25/M40 ABE28_RS04900 PF04293 SpoVR like protein ABE28_RS04905 PF07690 Major Facilitator Superfamily ABE28_RS04915 PF11849 Domain of unknown function (DUF3369) ABE28_RS04925 PF09335 SNARE associated Golgi protein ABE28_RS04930 PF00072 Response regulator receiver domain ABE28_RS04930 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS04935 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS04935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS04935 PF00989 PAS fold ABE28_RS04935 PF16736 Single Cache-like ABE28_RS04955 PF02040 Arsenical pump membrane protein ABE28_RS04960 PF02417 Chromate transporter ABE28_RS04965 PF02417 Chromate transporter ABE28_RS04975 PF07690 Major Facilitator Superfamily ABE28_RS04980 PF01116 Fructose-bisphosphate aldolase class-II ABE28_RS04985 PF08534 Redoxin ABE28_RS04990 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS04990 PF07729 FCD domain ABE28_RS04995 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABE28_RS05000 PF01979 Amidohydrolase family ABE28_RS05005 PF09339 IclR helix-turn-helix domain ABE28_RS05005 PF01614 Bacterial transcriptional regulator ABE28_RS05010 PF00456 Transketolase, thiamine diphosphate binding domain ABE28_RS05015 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABE28_RS05015 PF02779 Transketolase, pyrimidine binding domain ABE28_RS05015 PF02780 Transketolase, C-terminal domain ABE28_RS05025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABE28_RS05025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABE28_RS05025 PF00205 Thiamine pyrophosphate enzyme, central domain ABE28_RS05035 PF07687 Peptidase dimerisation domain ABE28_RS05035 PF01546 Peptidase family M20/M25/M40 ABE28_RS05040 PF17853 GGDEF-like domain ABE28_RS05040 PF13556 PucR C-terminal helix-turn-helix domain ABE28_RS05040 PF07905 Purine catabolism regulatory protein-like family ABE28_RS05045 PF01979 Amidohydrolase family ABE28_RS05050 PF05899 Protein of unknown function (DUF861) ABE28_RS05050 PF07883 Cupin domain ABE28_RS05060 PF00860 Permease family ABE28_RS05065 PF01274 Malate synthase ABE28_RS05080 PF00266 Aminotransferase class-V ABE28_RS05090 PF00501 AMP-binding enzyme ABE28_RS05090 PF14535 AMP-binding enzyme C-terminal domain ABE28_RS05095 PF05138 Phenylacetic acid catabolic protein ABE28_RS05120 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS05125 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS05130 PF00171 Aldehyde dehydrogenase family ABE28_RS05135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABE28_RS05135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABE28_RS05140 PF02803 Thiolase, C-terminal domain ABE28_RS05140 PF00108 Thiolase, N-terminal domain ABE28_RS05145 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS05150 PF08223 PaaX-like protein C-terminal domain ABE28_RS05150 PF07848 PaaX-like protein ABE28_RS05155 PF00132 Bacterial transferase hexapeptide (six repeats) ABE28_RS05160 PF03060 Nitronate monooxygenase ABE28_RS05165 PF09335 SNARE associated Golgi protein ABE28_RS05175 PF16916 Dimerisation domain of Zinc Transporter ABE28_RS05175 PF01545 Cation efflux family ABE28_RS05180 PF00072 Response regulator receiver domain ABE28_RS05180 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS05185 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS05185 PF16736 Single Cache-like ABE28_RS05185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS05185 PF00989 PAS fold ABE28_RS05190 PF03960 ArsC family ABE28_RS05195 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS05205 PF00313 'Cold-shock' DNA-binding domain ABE28_RS05210 PF00258 Flavodoxin ABE28_RS05215 PF00268 Ribonucleotide reductase, small chain ABE28_RS05220 PF02867 Ribonucleotide reductase, barrel domain ABE28_RS05220 PF03477 ATP cone domain ABE28_RS05220 PF00317 Ribonucleotide reductase, all-alpha domain ABE28_RS05225 PF01368 DHH family ABE28_RS05225 PF02833 DHHA2 domain ABE28_RS05250 PF07690 Major Facilitator Superfamily ABE28_RS05255 PF03600 Citrate transporter ABE28_RS05265 PF17773 UPF0176 acylphosphatase like domain ABE28_RS05265 PF12368 Rhodanase C-terminal ABE28_RS05265 PF00581 Rhodanese-like domain ABE28_RS05270 PF03060 Nitronate monooxygenase ABE28_RS05275 PF00583 Acetyltransferase (GNAT) family ABE28_RS05280 PF01569 PAP2 superfamily ABE28_RS05285 PF01098 Cell cycle protein ABE28_RS05290 PF06803 Protein of unknown function (DUF1232) ABE28_RS05295 PF03816 Cell envelope-related transcriptional attenuator domain ABE28_RS05310 PF01594 AI-2E family transporter ABE28_RS05320 PF03471 Transporter associated domain ABE28_RS05320 PF01595 Cyclin M transmembrane N-terminal domain ABE28_RS05320 PF00571 CBS domain ABE28_RS05325 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABE28_RS05325 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABE28_RS05335 PF09335 SNARE associated Golgi protein ABE28_RS05340 PF01595 Cyclin M transmembrane N-terminal domain ABE28_RS05340 PF00571 CBS domain ABE28_RS05340 PF03471 Transporter associated domain ABE28_RS05345 PF02743 Cache domain ABE28_RS05345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS05345 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS05350 PF16916 Dimerisation domain of Zinc Transporter ABE28_RS05350 PF01545 Cation efflux family ABE28_RS05355 PF00582 Universal stress protein family ABE28_RS05360 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS05360 PF00912 Transglycosylase ABE28_RS05370 PF01979 Amidohydrolase family ABE28_RS05375 PF00676 Dehydrogenase E1 component ABE28_RS05380 PF02780 Transketolase, C-terminal domain ABE28_RS05380 PF02779 Transketolase, pyrimidine binding domain ABE28_RS05385 PF02817 e3 binding domain ABE28_RS05385 PF00364 Biotin-requiring enzyme ABE28_RS05385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABE28_RS05390 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS05390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABE28_RS05395 PF00324 Amino acid permease ABE28_RS05400 PF00155 Aminotransferase class I and II ABE28_RS05405 PF01037 Lrp/AsnC ligand binding domain ABE28_RS05415 PF01037 Lrp/AsnC ligand binding domain ABE28_RS05420 PF04542 Sigma-70 region 2 ABE28_RS05420 PF08281 Sigma-70, region 4 ABE28_RS05435 PF01906 Putative heavy-metal-binding ABE28_RS05440 PF00255 Glutathione peroxidase ABE28_RS05445 PF00199 Catalase ABE28_RS05445 PF06628 Catalase-related immune-responsive ABE28_RS05450 PF03109 ABC1 family ABE28_RS05475 PF00478 IMP dehydrogenase / GMP reductase domain ABE28_RS05475 PF00571 CBS domain ABE28_RS05480 PF03717 Penicillin-binding Protein dimerisation domain ABE28_RS05480 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS05490 PF10720 Protein of unknown function (DUF2515) ABE28_RS05495 PF00664 ABC transporter transmembrane region ABE28_RS05495 PF00005 ABC transporter ABE28_RS05500 PF00005 ABC transporter ABE28_RS05500 PF00664 ABC transporter transmembrane region ABE28_RS05505 PF01197 Ribosomal protein L31 ABE28_RS05510 PF01053 Cys/Met metabolism PLP-dependent enzyme ABE28_RS05515 PF01053 Cys/Met metabolism PLP-dependent enzyme ABE28_RS05520 PF10415 Fumarase C C-terminus ABE28_RS05520 PF00206 Lyase ABE28_RS05530 PF03459 TOBE domain ABE28_RS05530 PF17912 MalK OB fold domain ABE28_RS05530 PF00005 ABC transporter ABE28_RS05535 PF13556 PucR C-terminal helix-turn-helix domain ABE28_RS05540 PF00465 Iron-containing alcohol dehydrogenase ABE28_RS05545 PF03180 NLPA lipoprotein ABE28_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS05555 PF00005 ABC transporter ABE28_RS05555 PF09383 NIL domain ABE28_RS05580 PF14398 YheC/D like ATP-grasp ABE28_RS05585 PF14398 YheC/D like ATP-grasp ABE28_RS05590 PF14398 YheC/D like ATP-grasp ABE28_RS05600 PF06133 Control of competence regulator ComK, YlbF/YmcA ABE28_RS05630 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS05630 PF00501 AMP-binding enzyme ABE28_RS05635 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS05640 PF14120 YhzD-like protein ABE28_RS05645 PF00291 Pyridoxal-phosphate dependent enzyme ABE28_RS05650 PF00149 Calcineurin-like phosphoesterase ABE28_RS05655 PF13514 AAA domain ABE28_RS05665 PF00005 ABC transporter ABE28_RS05675 PF02525 Flavodoxin-like fold ABE28_RS05685 PF01645 Conserved region in glutamate synthase ABE28_RS05690 PF01966 HD domain ABE28_RS05695 PF14147 Sporulation protein YhaL ABE28_RS05700 PF05698 Bacterial trigger factor protein (TF) C-terminus ABE28_RS05705 PF09680 Family of unknown function ABE28_RS05725 PF01047 MarR family ABE28_RS05730 PF12732 YtxH-like protein ABE28_RS05740 PF17099 Tryptophan transporter TrpP ABE28_RS05745 PF00266 Aminotransferase class-V ABE28_RS05750 PF01230 HIT domain ABE28_RS05755 PF00005 ABC transporter ABE28_RS05760 PF05975 Bacterial ABC transporter protein EcsB ABE28_RS05765 PF12787 EcsC protein family ABE28_RS05770 PF07687 Peptidase dimerisation domain ABE28_RS05770 PF01546 Peptidase family M20/M25/M40 ABE28_RS05780 PF03992 Antibiotic biosynthesis monooxygenase ABE28_RS05785 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABE28_RS05790 PF00762 Ferrochelatase ABE28_RS05795 PF17932 Tetracyclin repressor-like, C-terminal domain ABE28_RS05795 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS05800 PF14149 YhfH-like protein ABE28_RS05805 PF12706 Beta-lactamase superfamily domain ABE28_RS05810 PF03099 Biotin/lipoate A/B protein ligase family ABE28_RS05810 PF10437 Bacterial lipoate protein ligase C-terminus ABE28_RS05815 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS05815 PF00501 AMP-binding enzyme ABE28_RS05820 PF01966 HD domain ABE28_RS05825 PF00196 Bacterial regulatory proteins, luxR family ABE28_RS05825 PF00072 Response regulator receiver domain ABE28_RS05830 PF01435 Peptidase family M48 ABE28_RS05830 PF16491 CAAX prenyl protease N-terminal, five membrane helices ABE28_RS05835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABE28_RS05835 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABE28_RS05845 PF06338 ComK protein ABE28_RS05855 PF09335 SNARE associated Golgi protein ABE28_RS05860 PF10502 Signal peptidase, peptidase S26 ABE28_RS05865 PF13361 UvrD-like helicase C-terminal domain ABE28_RS05865 PF12705 PD-(D/E)XK nuclease superfamily ABE28_RS05870 PF13361 UvrD-like helicase C-terminal domain ABE28_RS05870 PF00580 UvrD/REP helicase N-terminal domain ABE28_RS05870 PF12705 PD-(D/E)XK nuclease superfamily ABE28_RS05890 PF10737 Spore germination protein GerPC ABE28_RS05895 PF10803 Spore germination GerPB ABE28_RS05900 PF10676 Spore germination protein gerPA/gerPF ABE28_RS05905 PF07690 Major Facilitator Superfamily ABE28_RS05910 PF04235 Protein of unknown function (DUF418) ABE28_RS05915 PF07457 Protein of unknown function (DUF1516) ABE28_RS05925 PF13537 Glutamine amidotransferase domain ABE28_RS05925 PF00733 Asparagine synthase ABE28_RS05930 PF00128 Alpha amylase, catalytic domain ABE28_RS05930 PF02903 Alpha amylase, N-terminal ig-like domain ABE28_RS05930 PF16657 Maltogenic Amylase, C-terminal domain ABE28_RS05935 PF13416 Bacterial extracellular solute-binding protein ABE28_RS05940 PF00128 Alpha amylase, catalytic domain ABE28_RS05940 PF02806 Alpha amylase, C-terminal all-beta domain ABE28_RS05940 PF00686 Starch binding domain ABE28_RS05945 PF00128 Alpha amylase, catalytic domain ABE28_RS05945 PF16657 Maltogenic Amylase, C-terminal domain ABE28_RS05950 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS05950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ABE28_RS05955 PF00753 Metallo-beta-lactamase superfamily ABE28_RS05955 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABE28_RS05965 PF04461 Protein of unknown function (DUF520) ABE28_RS05970 PF02645 Uncharacterised protein, DegV family COG1307 ABE28_RS05975 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABE28_RS05975 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABE28_RS05980 PF00477 Small hydrophilic plant seed protein ABE28_RS05980 PF10685 Stress-induced bacterial acidophilic repeat motif ABE28_RS05985 PF12758 Protein of unknown function (DUF3813) ABE28_RS06000 PF00326 Prolyl oligopeptidase family ABE28_RS06005 PF01883 Iron-sulfur cluster assembly protein ABE28_RS06010 PF04055 Radical SAM superfamily ABE28_RS06010 PF06463 Molybdenum Cofactor Synthesis C ABE28_RS06015 PF00325 Bacterial regulatory proteins, crp family ABE28_RS06015 PF00027 Cyclic nucleotide-binding domain ABE28_RS06020 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABE28_RS06020 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABE28_RS06025 PF01960 ArgJ family ABE28_RS06030 PF00696 Amino acid kinase family ABE28_RS06035 PF00202 Aminotransferase class-III ABE28_RS06040 PF00117 Glutamine amidotransferase class-I ABE28_RS06040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABE28_RS06045 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABE28_RS06045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABE28_RS06050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABE28_RS06050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABE28_RS06055 PF14168 YjzC-like protein ABE28_RS06060 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABE28_RS06065 PF02861 Clp amino terminal domain, pathogenicity island component ABE28_RS06065 PF10431 C-terminal, D2-small domain, of ClpB protein ABE28_RS06065 PF00004 ATPase family associated with various cellular activities (AAA) ABE28_RS06065 PF07724 AAA domain (Cdc48 subfamily) ABE28_RS06065 PF17871 AAA lid domain ABE28_RS06085 PF10815 ComZ ABE28_RS06095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABE28_RS06095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABE28_RS06100 PF00109 Beta-ketoacyl synthase, N-terminal domain ABE28_RS06100 PF02801 Beta-ketoacyl synthase, C-terminal domain ABE28_RS06105 PF10026 Predicted Zn-dependent protease (DUF2268) ABE28_RS06110 PF12227 Protein of unknown function (DUF3603) ABE28_RS06115 PF00579 tRNA synthetases class I (W and Y) ABE28_RS06130 PF13508 Acetyltransferase (GNAT) domain ABE28_RS06140 PF03960 ArsC family ABE28_RS06145 PF05389 Negative regulator of genetic competence (MecA) ABE28_RS06150 PF13091 PLD-like domain ABE28_RS06150 PF13396 Phospholipase_D-nuclease N-terminal ABE28_RS06155 PF06054 Competence protein CoiA-like family ABE28_RS06160 PF08439 Oligopeptidase F ABE28_RS06160 PF01432 Peptidase family M3 ABE28_RS06180 PF01152 Bacterial-like globin ABE28_RS06185 PF01464 Transglycosylase SLT domain ABE28_RS06190 PF01928 CYTH domain ABE28_RS06195 PF04607 Region found in RelA / SpoT proteins ABE28_RS06200 PF01513 ATP-NAD kinase ABE28_RS06205 PF00849 RNA pseudouridylate synthase ABE28_RS06210 PF00149 Calcineurin-like phosphoesterase ABE28_RS06215 PF03448 MgtE intracellular N domain ABE28_RS06215 PF00571 CBS domain ABE28_RS06215 PF01769 Divalent cation transporter ABE28_RS06225 PF01497 Periplasmic binding protein ABE28_RS06240 PF07098 Protein of unknown function (DUF1360) ABE28_RS06250 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ABE28_RS06255 PF07451 Stage V sporulation protein AD (SpoVAD) ABE28_RS06260 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ABE28_RS06265 PF14069 Stage VI sporulation protein F ABE28_RS06270 PF13361 UvrD-like helicase C-terminal domain ABE28_RS06270 PF00580 UvrD/REP helicase N-terminal domain ABE28_RS06280 PF07552 Spore Coat Protein X and V domain ABE28_RS06290 PF13673 Acetyltransferase (GNAT) domain ABE28_RS06300 PF00756 Putative esterase ABE28_RS06305 PF04608 Phosphatidylglycerophosphatase A ABE28_RS06320 PF11188 Protein of unknown function (DUF2975) ABE28_RS06325 PF13443 Cro/C1-type HTH DNA-binding domain ABE28_RS06330 PF08281 Sigma-70, region 4 ABE28_RS06330 PF04542 Sigma-70 region 2 ABE28_RS06345 PF01416 tRNA pseudouridine synthase ABE28_RS06350 PF01965 DJ-1/PfpI family ABE28_RS06355 PF01061 ABC-2 type transporter ABE28_RS06360 PF02272 DHHA1 domain ABE28_RS06360 PF01368 DHH family ABE28_RS06365 PF02515 CoA-transferase family III ABE28_RS06370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS06370 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS06370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS06385 PF08757 CotH kinase protein ABE28_RS06395 PF00753 Metallo-beta-lactamase superfamily ABE28_RS06395 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABE28_RS06400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABE28_RS06400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABE28_RS06405 PF07690 Major Facilitator Superfamily ABE28_RS06415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABE28_RS06415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABE28_RS06425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABE28_RS06430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ABE28_RS06430 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS06435 PF00128 Alpha amylase, catalytic domain ABE28_RS06440 PF01547 Bacterial extracellular solute-binding protein ABE28_RS06445 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS06450 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS06455 PF00107 Zinc-binding dehydrogenase ABE28_RS06460 PF01261 Xylose isomerase-like TIM barrel ABE28_RS06465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABE28_RS06465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABE28_RS06470 PF03633 Glycosyl hydrolase family 65, C-terminal domain ABE28_RS06470 PF03632 Glycosyl hydrolase family 65 central catalytic domain ABE28_RS06470 PF03636 Glycosyl hydrolase family 65, N-terminal domain ABE28_RS06475 PF02595 Glycerate kinase family ABE28_RS06480 PF13419 Haloacid dehalogenase-like hydrolase ABE28_RS06485 PF01740 STAS domain ABE28_RS06485 PF00916 Sulfate permease family ABE28_RS06490 PF13411 MerR HTH family regulatory protein ABE28_RS06495 PF00135 Carboxylesterase family ABE28_RS06500 PF00324 Amino acid permease ABE28_RS06505 PF01467 Cytidylyltransferase-like ABE28_RS06515 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS06520 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS06525 PF00005 ABC transporter ABE28_RS06525 PF17850 CysA C-terminal regulatory domain ABE28_RS06525 PF12857 TOBE-like domain ABE28_RS06530 PF00877 NlpC/P60 family ABE28_RS06545 PF01263 Aldose 1-epimerase ABE28_RS06550 PF13520 Amino acid permease ABE28_RS06555 PF10055 Uncharacterized small protein (DUF2292) ABE28_RS06575 PF00313 'Cold-shock' DNA-binding domain ABE28_RS06585 PF02073 Thermophilic metalloprotease (M29) ABE28_RS06590 PF00171 Aldehyde dehydrogenase family ABE28_RS06595 PF07690 Major Facilitator Superfamily ABE28_RS06600 PF02581 Thiamine monophosphate synthase ABE28_RS06605 PF02110 Hydroxyethylthiazole kinase family ABE28_RS06610 PF02581 Thiamine monophosphate synthase ABE28_RS06610 PF08543 Phosphomethylpyrimidine kinase ABE28_RS06620 PF03070 TENA/THI-4/PQQC family ABE28_RS06635 PF00583 Acetyltransferase (GNAT) family ABE28_RS06645 PF00664 ABC transporter transmembrane region ABE28_RS06645 PF00005 ABC transporter ABE28_RS06650 PF12867 DinB superfamily ABE28_RS06655 PF13539 D-alanyl-D-alanine carboxypeptidase ABE28_RS06660 PF03061 Thioesterase superfamily ABE28_RS06665 PF01027 Inhibitor of apoptosis-promoting Bax1 ABE28_RS06670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABE28_RS06670 PF00005 ABC transporter ABE28_RS06675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABE28_RS06675 PF00005 ABC transporter ABE28_RS06680 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS06685 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS06690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABE28_RS06700 PF05343 M42 glutamyl aminopeptidase ABE28_RS06705 PF16242 Pyridoxamine 5'-phosphate oxidase like ABE28_RS06710 PF03575 Peptidase family S51 ABE28_RS06715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABE28_RS06715 PF02875 Mur ligase family, glutamate ligase domain ABE28_RS06715 PF08245 Mur ligase middle domain ABE28_RS06720 PF02096 60Kd inner membrane protein ABE28_RS06735 PF03009 Glycerophosphoryl diester phosphodiesterase family ABE28_RS06745 PF02566 OsmC-like protein ABE28_RS06750 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS06755 PF00005 ABC transporter ABE28_RS06765 PF00313 'Cold-shock' DNA-binding domain ABE28_RS06770 PF16658 Class II release factor RF3, C-terminal domain ABE28_RS06770 PF00009 Elongation factor Tu GTP binding domain ABE28_RS06770 PF03144 Elongation factor Tu domain 2 ABE28_RS06775 PF03553 Na+/H+ antiporter family ABE28_RS06780 PF01098 Cell cycle protein ABE28_RS06785 PF07993 Male sterility protein ABE28_RS06785 PF00550 Phosphopantetheine attachment site ABE28_RS06790 PF00171 Aldehyde dehydrogenase family ABE28_RS06795 PF03741 Integral membrane protein TerC family ABE28_RS06800 PF04542 Sigma-70 region 2 ABE28_RS06805 PF12791 Anti-sigma factor N-terminus ABE28_RS06810 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABE28_RS06815 PF02386 Cation transport protein ABE28_RS06820 PF00989 PAS fold ABE28_RS06820 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS06820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS06825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS06825 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS06825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS06835 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS06835 PF00501 AMP-binding enzyme ABE28_RS06840 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS06840 PF08361 MAATS-type transcriptional repressor, C-terminal region ABE28_RS06845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABE28_RS06845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABE28_RS06850 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS06865 PF04029 2-phosphosulpholactate phosphatase ABE28_RS06875 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS06880 PF00107 Zinc-binding dehydrogenase ABE28_RS06880 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS06895 PF01757 Acyltransferase family ABE28_RS06900 PF13188 PAS domain ABE28_RS06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS06900 PF13426 PAS domain ABE28_RS06900 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS06900 PF00989 PAS fold ABE28_RS06910 PF02535 ZIP Zinc transporter ABE28_RS06915 PF07690 Major Facilitator Superfamily ABE28_RS06920 PF02743 Cache domain ABE28_RS06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS06920 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS06925 PF01047 MarR family ABE28_RS06930 PF08439 Oligopeptidase F ABE28_RS06930 PF01432 Peptidase family M3 ABE28_RS06945 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) ABE28_RS06965 PF00565 Staphylococcal nuclease homologue ABE28_RS06970 PF09383 NIL domain ABE28_RS06970 PF00005 ABC transporter ABE28_RS06975 PF03649 Uncharacterised protein family (UPF0014) ABE28_RS06980 PF00381 PTS HPr component phosphorylation site ABE28_RS06985 PF02896 PEP-utilising enzyme, TIM barrel domain ABE28_RS06985 PF05524 PEP-utilising enzyme, N-terminal ABE28_RS06985 PF00391 PEP-utilising enzyme, mobile domain ABE28_RS06990 PF00106 short chain dehydrogenase ABE28_RS06995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABE28_RS06995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABE28_RS07005 PF00155 Aminotransferase class I and II ABE28_RS07010 PF01544 CorA-like Mg2+ transporter protein ABE28_RS07015 PF00072 Response regulator receiver domain ABE28_RS07015 PF01584 CheW-like domain ABE28_RS07020 PF14177 YkyB-like protein ABE28_RS07030 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABE28_RS07035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABE28_RS07040 PF00149 Calcineurin-like phosphoesterase ABE28_RS07040 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABE28_RS07045 PF02080 TrkA-C domain ABE28_RS07045 PF03600 Citrate transporter ABE28_RS07050 PF00563 EAL domain ABE28_RS07050 PF10388 EAL-domain associated signalling protein domain ABE28_RS07070 PF00753 Metallo-beta-lactamase superfamily ABE28_RS07075 PF08796 Protein of unknown function (DUF1797) ABE28_RS07095 PF07690 Major Facilitator Superfamily ABE28_RS07100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS07100 PF03466 LysR substrate binding domain ABE28_RS07105 PF14602 Hexapeptide repeat of succinyl-transferase ABE28_RS07105 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ABE28_RS07105 PF00132 Bacterial transferase hexapeptide (six repeats) ABE28_RS07110 PF07687 Peptidase dimerisation domain ABE28_RS07110 PF01546 Peptidase family M20/M25/M40 ABE28_RS07115 PF02254 TrkA-N domain ABE28_RS07115 PF02080 TrkA-C domain ABE28_RS07120 PF00753 Metallo-beta-lactamase superfamily ABE28_RS07120 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABE28_RS07120 PF17770 Ribonuclease J C-terminal domain ABE28_RS07125 PF07288 Protein of unknown function (DUF1447) ABE28_RS07135 PF01327 Polypeptide deformylase ABE28_RS07140 PF10368 Putative cell-wall binding lipoprotein ABE28_RS07145 PF00676 Dehydrogenase E1 component ABE28_RS07150 PF02779 Transketolase, pyrimidine binding domain ABE28_RS07150 PF02780 Transketolase, C-terminal domain ABE28_RS07155 PF02817 e3 binding domain ABE28_RS07155 PF00364 Biotin-requiring enzyme ABE28_RS07155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABE28_RS07160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABE28_RS07160 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS07170 PF01522 Polysaccharide deacetylase ABE28_RS07170 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain ABE28_RS07180 PF01276 Orn/Lys/Arg decarboxylase, major domain ABE28_RS07180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ABE28_RS07185 PF03060 Nitronate monooxygenase ABE28_RS07190 PF05256 Uncharacterised protein family (UPF0223) ABE28_RS07195 PF04715 Anthranilate synthase component I, N terminal region ABE28_RS07195 PF00425 chorismate binding enzyme ABE28_RS07200 PF00591 Glycosyl transferase family, a/b domain ABE28_RS07200 PF00117 Glutamine amidotransferase class-I ABE28_RS07200 PF02885 Glycosyl transferase family, helical bundle domain ABE28_RS07205 PF02885 Glycosyl transferase family, helical bundle domain ABE28_RS07205 PF00591 Glycosyl transferase family, a/b domain ABE28_RS07210 PF00218 Indole-3-glycerol phosphate synthase ABE28_RS07215 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABE28_RS07220 PF00291 Pyridoxal-phosphate dependent enzyme ABE28_RS07225 PF00290 Tryptophan synthase alpha chain ABE28_RS07230 PF06335 Protein of unknown function (DUF1054) ABE28_RS07240 PF00459 Inositol monophosphatase family ABE28_RS07245 PF17259 Family of unknown function (DUF5325) ABE28_RS07250 PF00009 Elongation factor Tu GTP binding domain ABE28_RS07250 PF14492 Elongation Factor G, domain II ABE28_RS07250 PF03144 Elongation factor Tu domain 2 ABE28_RS07250 PF00679 Elongation factor G C-terminus ABE28_RS07255 PF14036 YlaH-like protein ABE28_RS07270 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) ABE28_RS07275 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) ABE28_RS07280 PF13638 PIN domain ABE28_RS07280 PF02562 PhoH-like protein ABE28_RS07290 PF07408 Protein of unknown function (DUF1507) ABE28_RS07295 PF00289 Biotin carboxylase, N-terminal domain ABE28_RS07295 PF02436 Conserved carboxylase domain ABE28_RS07295 PF02785 Biotin carboxylase C-terminal domain ABE28_RS07295 PF00364 Biotin-requiring enzyme ABE28_RS07295 PF00682 HMGL-like ABE28_RS07295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABE28_RS07300 PF02628 Cytochrome oxidase assembly protein ABE28_RS07305 PF01040 UbiA prenyltransferase family ABE28_RS07310 PF00034 Cytochrome c ABE28_RS07310 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ABE28_RS07310 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABE28_RS07315 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABE28_RS07320 PF00510 Cytochrome c oxidase subunit III ABE28_RS07325 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABE28_RS07330 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) ABE28_RS07340 PF08868 YugN-like family ABE28_RS07345 PF14504 CAP-associated N-terminal ABE28_RS07345 PF00188 Cysteine-rich secretory protein family ABE28_RS07360 PF14003 YlbE-like protein ABE28_RS07370 PF06133 Control of competence regulator ComK, YlbF/YmcA ABE28_RS07380 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) ABE28_RS07400 PF01467 Cytidylyltransferase-like ABE28_RS07405 PF07670 Nucleoside recognition ABE28_RS07410 PF01734 Patatin-like phospholipase ABE28_RS07415 PF13180 PDZ domain ABE28_RS07415 PF05362 Lon protease (S16) C-terminal proteolytic domain ABE28_RS07420 PF13276 HTH-like domain ABE28_RS07420 PF00665 Integrase core domain ABE28_RS07420 PF13333 Integrase core domain ABE28_RS07430 PF05636 HIGH Nucleotidyl Transferase ABE28_RS07435 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABE28_RS07440 PF01783 Ribosomal L32p protein family ABE28_RS07445 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS07455 PF00583 Acetyltransferase (GNAT) family ABE28_RS07460 PF02558 Ketopantoate reductase PanE/ApbA ABE28_RS07460 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABE28_RS07470 PF10079 Bacillithiol biosynthesis BshC ABE28_RS07475 PF02381 MraZ protein, putative antitoxin-like ABE28_RS07480 PF01795 MraW methylase family ABE28_RS07485 PF04977 Septum formation initiator ABE28_RS07490 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS07490 PF03793 PASTA domain ABE28_RS07490 PF03717 Penicillin-binding Protein dimerisation domain ABE28_RS07495 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS07495 PF03793 PASTA domain ABE28_RS07495 PF03717 Penicillin-binding Protein dimerisation domain ABE28_RS07500 PF08245 Mur ligase middle domain ABE28_RS07500 PF01225 Mur ligase family, catalytic domain ABE28_RS07500 PF02875 Mur ligase family, glutamate ligase domain ABE28_RS07505 PF00953 Glycosyl transferase family 4 ABE28_RS07505 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ABE28_RS07510 PF08245 Mur ligase middle domain ABE28_RS07510 PF02875 Mur ligase family, glutamate ligase domain ABE28_RS07515 PF01098 Cell cycle protein ABE28_RS07520 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABE28_RS07520 PF01565 FAD binding domain ABE28_RS07525 PF08478 POTRA domain, FtsQ-type ABE28_RS07530 PF02491 SHS2 domain inserted in FTSA ABE28_RS07535 PF12327 FtsZ family, C-terminal domain ABE28_RS07535 PF00091 Tubulin/FtsZ family, GTPase domain ABE28_RS07540 PF03419 Sporulation factor SpoIIGA ABE28_RS07545 PF04542 Sigma-70 region 2 ABE28_RS07545 PF04545 Sigma-70, region 4 ABE28_RS07550 PF04539 Sigma-70 region 3 ABE28_RS07550 PF04545 Sigma-70, region 4 ABE28_RS07550 PF04542 Sigma-70 region 2 ABE28_RS07555 PF05239 PRC-barrel domain ABE28_RS07560 PF02578 Multi-copper polyphenol oxidoreductase laccase ABE28_RS07565 PF01168 Alanine racemase, N-terminal domain ABE28_RS07570 PF04472 Cell division protein SepF ABE28_RS07575 PF02325 YGGT family ABE28_RS07580 PF01479 S4 domain ABE28_RS07580 PF17774 Putative RNA-binding domain in YlmH ABE28_RS07585 PF05103 DivIVA protein ABE28_RS07590 PF08264 Anticodon-binding domain of tRNA ABE28_RS07590 PF00133 tRNA synthetases class I (I, L, M and V) ABE28_RS07590 PF06827 Zinc finger found in FPG and IleRS ABE28_RS07595 PF01252 Signal peptidase (SPase) II ABE28_RS07600 PF01479 S4 domain ABE28_RS07600 PF00849 RNA pseudouridylate synthase ABE28_RS07605 PF00156 Phosphoribosyl transferase domain ABE28_RS07610 PF00860 Permease family ABE28_RS07615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABE28_RS07615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABE28_RS07620 PF01979 Amidohydrolase family ABE28_RS07625 PF00117 Glutamine amidotransferase class-I ABE28_RS07625 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABE28_RS07630 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABE28_RS07630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABE28_RS07630 PF02142 MGS-like domain ABE28_RS07635 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ABE28_RS07640 PF01180 Dihydroorotate dehydrogenase ABE28_RS07645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABE28_RS07650 PF00156 Phosphoribosyl transferase domain ABE28_RS07655 PF05670 NFACT protein RNA binding domain ABE28_RS07660 PF00689 Cation transporting ATPase, C-terminus ABE28_RS07660 PF00690 Cation transporter/ATPase, N-terminus ABE28_RS07665 PF03755 YicC-like family, N-terminal region ABE28_RS07665 PF08340 Domain of unknown function (DUF1732) ABE28_RS07670 PF04025 Domain of unknown function (DUF370) ABE28_RS07675 PF00625 Guanylate kinase ABE28_RS07680 PF01192 RNA polymerase Rpb6 ABE28_RS07685 PF04127 DNA / pantothenate metabolism flavoprotein ABE28_RS07685 PF02441 Flavoprotein ABE28_RS07690 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABE28_RS07690 PF18074 Primosomal protein N C-terminal domain ABE28_RS07690 PF00271 Helicase conserved C-terminal domain ABE28_RS07690 PF17764 3′ DNA-binding domain (3′BD) ABE28_RS07690 PF04851 Type III restriction enzyme, res subunit ABE28_RS07695 PF01327 Polypeptide deformylase ABE28_RS07700 PF00551 Formyl transferase ABE28_RS07700 PF02911 Formyl transferase, C-terminal domain ABE28_RS07705 PF01029 NusB family ABE28_RS07705 PF01189 16S rRNA methyltransferase RsmB/F ABE28_RS07710 PF04055 Radical SAM superfamily ABE28_RS07720 PF00069 Protein kinase domain ABE28_RS07720 PF03793 PASTA domain ABE28_RS07725 PF03193 RsgA GTPase ABE28_RS07725 PF16745 RsgA N-terminal domain ABE28_RS07730 PF00834 Ribulose-phosphate 3 epimerase family ABE28_RS07735 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain ABE28_RS07735 PF04263 Thiamin pyrophosphokinase, catalytic domain ABE28_RS07740 PF08183 Stage V sporulation protein family ABE28_RS07745 PF00830 Ribosomal L28 family ABE28_RS07750 PF03780 Asp23 family, cell envelope-related function ABE28_RS07755 PF13684 Dihydroxyacetone kinase family ABE28_RS07755 PF02734 DAK2 domain ABE28_RS07760 PF01842 ACT domain ABE28_RS07760 PF03315 Serine dehydratase beta chain ABE28_RS07765 PF03313 Serine dehydratase alpha chain ABE28_RS07770 PF00271 Helicase conserved C-terminal domain ABE28_RS07770 PF17191 RecG wedge domain ABE28_RS07770 PF00270 DEAD/DEAH box helicase ABE28_RS07775 PF08279 HTH domain ABE28_RS07775 PF01575 MaoC like domain ABE28_RS07780 PF02504 Fatty acid synthesis protein ABE28_RS07785 PF00698 Acyl transferase domain ABE28_RS07795 PF00550 Phosphopantetheine attachment site ABE28_RS07800 PF14622 Ribonuclease-III-like ABE28_RS07800 PF00035 Double-stranded RNA binding motif ABE28_RS07805 PF06470 SMC proteins Flexible Hinge Domain ABE28_RS07805 PF02463 RecF/RecN/SMC N terminal domain ABE28_RS07810 PF00448 SRP54-type protein, GTPase domain ABE28_RS07810 PF02881 SRP54-type protein, helical bundle domain ABE28_RS07820 PF04297 Putative helix-turn-helix protein, YlxM / p13 like ABE28_RS07825 PF00448 SRP54-type protein, GTPase domain ABE28_RS07825 PF02881 SRP54-type protein, helical bundle domain ABE28_RS07825 PF02978 Signal peptide binding domain ABE28_RS07830 PF00886 Ribosomal protein S16 ABE28_RS07845 PF01782 RimM N-terminal domain ABE28_RS07845 PF05239 PRC-barrel domain ABE28_RS07850 PF01746 tRNA (Guanine-1)-methyltransferase ABE28_RS07855 PF01245 Ribosomal protein L19 ABE28_RS07860 PF10502 Signal peptidase, peptidase S26 ABE28_RS07865 PF01926 50S ribosome-binding GTPase ABE28_RS07870 PF01351 Ribonuclease HII ABE28_RS07880 PF01312 FlhB HrpN YscU SpaS Family ABE28_RS07885 PF00549 CoA-ligase ABE28_RS07885 PF08442 ATP-grasp domain ABE28_RS07890 PF02629 CoA binding domain ABE28_RS07890 PF00549 CoA-ligase ABE28_RS07895 PF02481 DNA recombination-mediator protein A ABE28_RS07900 PF01131 DNA topoisomerase ABE28_RS07900 PF01751 Toprim domain ABE28_RS07900 PF01396 Topoisomerase DNA binding C4 zinc finger ABE28_RS07905 PF01134 Glucose inhibited division protein A ABE28_RS07910 PF00589 Phage integrase family ABE28_RS07910 PF02899 Phage integrase, N-terminal SAM-like domain ABE28_RS07915 PF00227 Proteasome subunit ABE28_RS07920 PF10431 C-terminal, D2-small domain, of ClpB protein ABE28_RS07920 PF07724 AAA domain (Cdc48 subfamily) ABE28_RS07920 PF00004 ATPase family associated with various cellular activities (AAA) ABE28_RS07925 PF06018 CodY GAF-like domain ABE28_RS07925 PF08222 CodY helix-turn-helix domain ABE28_RS07930 PF00460 Flagella basal body rod protein ABE28_RS07935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABE28_RS07935 PF00460 Flagella basal body rod protein ABE28_RS07940 PF02049 Flagellar hook-basal body complex protein FliE ABE28_RS07945 PF08345 Flagellar M-ring protein C-terminal ABE28_RS07945 PF01514 Secretory protein of YscJ/FliF family ABE28_RS07950 PF14842 FliG N-terminal domain ABE28_RS07950 PF14841 FliG middle domain ABE28_RS07950 PF01706 FliG C-terminal domain ABE28_RS07955 PF02108 Flagellar assembly protein FliH ABE28_RS07960 PF18269 T3SS EscN ATPase C-terminal domain ABE28_RS07960 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABE28_RS07960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABE28_RS07965 PF02050 Flagellar FliJ protein ABE28_RS07980 PF03963 Flagellar hook capping protein - N-terminal region ABE28_RS07990 PF07559 Flagellar basal body protein FlaE ABE28_RS07990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABE28_RS07990 PF00460 Flagella basal body rod protein ABE28_RS07995 PF06289 Flagellar and Swarming motility proteins ABE28_RS08000 PF03748 Flagellar basal body-associated protein FliL ABE28_RS08005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABE28_RS08005 PF02154 Flagellar motor switch protein FliM ABE28_RS08010 PF04509 CheC-like family ABE28_RS08010 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABE28_RS08015 PF00072 Response regulator receiver domain ABE28_RS08020 PF04347 Flagellar biosynthesis protein, FliO ABE28_RS08025 PF00813 FliP family ABE28_RS08030 PF01313 Bacterial export proteins, family 3 ABE28_RS08035 PF01311 Bacterial export proteins, family 1 ABE28_RS08040 PF01312 FlhB HrpN YscU SpaS Family ABE28_RS08045 PF00771 FHIPEP family ABE28_RS08050 PF00448 SRP54-type protein, GTPase domain ABE28_RS08055 PF10609 NUBPL iron-transfer P-loop NTPase ABE28_RS08060 PF01339 CheB methylesterase ABE28_RS08060 PF00072 Response regulator receiver domain ABE28_RS08065 PF01584 CheW-like domain ABE28_RS08065 PF02895 Signal transducing histidine kinase, homodimeric domain ABE28_RS08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS08065 PF01627 Hpt domain ABE28_RS08065 PF07194 P2 response regulator binding domain ABE28_RS08070 PF01584 CheW-like domain ABE28_RS08075 PF04509 CheC-like family ABE28_RS08080 PF03975 CheD chemotactic sensory transduction ABE28_RS08085 PF04545 Sigma-70, region 4 ABE28_RS08085 PF04539 Sigma-70 region 3 ABE28_RS08085 PF04542 Sigma-70 region 2 ABE28_RS08095 PF00318 Ribosomal protein S2 ABE28_RS08100 PF00889 Elongation factor TS ABE28_RS08105 PF00696 Amino acid kinase family ABE28_RS08110 PF01765 Ribosome recycling factor ABE28_RS08115 PF01255 Putative undecaprenyl diphosphate synthase ABE28_RS08125 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABE28_RS08125 PF13288 DXP reductoisomerase C-terminal domain ABE28_RS08125 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABE28_RS08130 PF02163 Peptidase family M50 ABE28_RS08130 PF13180 PDZ domain ABE28_RS08135 PF04073 Aminoacyl-tRNA editing domain ABE28_RS08135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABE28_RS08135 PF03129 Anticodon binding domain ABE28_RS08140 PF14480 DNA polymerase III polC-type N-terminus I ABE28_RS08140 PF11490 DNA polymerase III polC-type N-terminus II ABE28_RS08140 PF00929 Exonuclease ABE28_RS08140 PF14579 Helix-hairpin-helix motif ABE28_RS08140 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABE28_RS08140 PF02811 PHP domain ABE28_RS08140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABE28_RS08145 PF17384 RimP C-terminal SH3 domain ABE28_RS08145 PF02576 RimP N-terminal domain ABE28_RS08150 PF08529 NusA N-terminal domain ABE28_RS08150 PF00575 S1 RNA binding domain ABE28_RS08150 PF13184 NusA-like KH domain ABE28_RS08155 PF04296 Protein of unknown function (DUF448) ABE28_RS08160 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ABE28_RS08165 PF00009 Elongation factor Tu GTP binding domain ABE28_RS08165 PF04760 Translation initiation factor IF-2, N-terminal region ABE28_RS08165 PF11987 Translation-initiation factor 2 ABE28_RS08170 PF04456 Protein of unknown function (DUF503) ABE28_RS08175 PF02033 Ribosome-binding factor A ABE28_RS08180 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABE28_RS08180 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABE28_RS08185 PF06574 FAD synthetase ABE28_RS08185 PF01687 Riboflavin kinase ABE28_RS08190 PF00312 Ribosomal protein S15 ABE28_RS08195 PF00575 S1 RNA binding domain ABE28_RS08195 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABE28_RS08195 PF01138 3' exoribonuclease family, domain 1 ABE28_RS08195 PF03725 3' exoribonuclease family, domain 2 ABE28_RS08195 PF00013 KH domain ABE28_RS08200 PF01522 Polysaccharide deacetylase ABE28_RS08205 PF00675 Insulinase (Peptidase family M16) ABE28_RS08205 PF05193 Peptidase M16 inactive domain ABE28_RS08210 PF05239 PRC-barrel domain ABE28_RS08215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABE28_RS08215 PF16924 Dipicolinate synthase subunit A N-terminal domain ABE28_RS08220 PF02441 Flavoprotein ABE28_RS08225 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABE28_RS08225 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABE28_RS08230 PF00696 Amino acid kinase family ABE28_RS08230 PF13840 ACT domain ABE28_RS08235 PF00701 Dihydrodipicolinate synthetase family ABE28_RS08240 PF00753 Metallo-beta-lactamase superfamily ABE28_RS08240 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABE28_RS08240 PF17770 Ribonuclease J C-terminal domain ABE28_RS08245 PF00574 Clp protease ABE28_RS08255 PF17854 FtsK alpha domain ABE28_RS08255 PF09397 Ftsk gamma domain ABE28_RS08255 PF01580 FtsK/SpoIIIE family ABE28_RS08265 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS08265 PF07702 UTRA domain ABE28_RS08270 PF02608 ABC transporter substrate-binding protein PnrA-like ABE28_RS08275 PF00005 ABC transporter ABE28_RS08280 PF02653 Branched-chain amino acid transport system / permease component ABE28_RS08285 PF02653 Branched-chain amino acid transport system / permease component ABE28_RS08290 PF05193 Peptidase M16 inactive domain ABE28_RS08295 PF05193 Peptidase M16 inactive domain ABE28_RS08295 PF00675 Insulinase (Peptidase family M16) ABE28_RS08305 PF11588 Protein of unknown function (DUF3243) ABE28_RS08310 PF11868 Protein of unknown function (DUF3388) ABE28_RS08315 PF13464 Domain of unknown function (DUF4115) ABE28_RS08320 PF01066 CDP-alcohol phosphatidyltransferase ABE28_RS08325 PF00994 Probable molybdopterin binding domain ABE28_RS08325 PF18146 Damage-inducible protein CinA KH domain ABE28_RS08325 PF02464 Competence-damaged protein ABE28_RS08330 PF00154 recA bacterial DNA recombination protein ABE28_RS08335 PF12072 Domain of unknown function (DUF3552) ABE28_RS08335 PF00013 KH domain ABE28_RS08335 PF01966 HD domain ABE28_RS08340 PF13277 YmdB-like protein ABE28_RS08345 PF04232 Stage V sporulation protein S (SpoVS) ABE28_RS08355 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ABE28_RS08355 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ABE28_RS08355 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ABE28_RS08360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABE28_RS08365 PF00107 Zinc-binding dehydrogenase ABE28_RS08365 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS08370 PF01938 TRAM domain ABE28_RS08370 PF04055 Radical SAM superfamily ABE28_RS08370 PF00919 Uncharacterized protein family UPF0004 ABE28_RS08375 PF06133 Control of competence regulator ComK, YlbF/YmcA ABE28_RS08380 PF10628 Outer spore coat protein E (CotE) ABE28_RS08385 PF00488 MutS domain V ABE28_RS08385 PF05188 MutS domain II ABE28_RS08385 PF01624 MutS domain I ABE28_RS08385 PF05190 MutS family domain IV ABE28_RS08385 PF05192 MutS domain III ABE28_RS08390 PF01119 DNA mismatch repair protein, C-terminal domain ABE28_RS08390 PF08676 MutL C terminal dimerisation domain ABE28_RS08395 PF00485 Phosphoribulokinase / Uridine kinase family ABE28_RS08410 PF01546 Peptidase family M20/M25/M40 ABE28_RS08415 PF07687 Peptidase dimerisation domain ABE28_RS08415 PF01546 Peptidase family M20/M25/M40 ABE28_RS08420 PF07729 FCD domain ABE28_RS08420 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS08425 PF13378 Enolase C-terminal domain-like ABE28_RS08425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABE28_RS08430 PF07690 Major Facilitator Superfamily ABE28_RS08435 PF03737 Aldolase/RraA ABE28_RS08440 PF07690 Major Facilitator Superfamily ABE28_RS08445 PF02525 Flavodoxin-like fold ABE28_RS08450 PF02082 Transcriptional regulator ABE28_RS08470 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABE28_RS08480 PF07883 Cupin domain ABE28_RS08485 PF01494 FAD binding domain ABE28_RS08490 PF02126 Phosphotriesterase family ABE28_RS08510 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ABE28_RS08510 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ABE28_RS08515 PF00753 Metallo-beta-lactamase superfamily ABE28_RS08520 PF01144 Coenzyme A transferase ABE28_RS08525 PF01144 Coenzyme A transferase ABE28_RS08535 PF07690 Major Facilitator Superfamily ABE28_RS08540 PF01494 FAD binding domain ABE28_RS08545 PF07859 alpha/beta hydrolase fold ABE28_RS08550 PF07690 Major Facilitator Superfamily ABE28_RS08555 PF00753 Metallo-beta-lactamase superfamily ABE28_RS08555 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABE28_RS08565 PF01546 Peptidase family M20/M25/M40 ABE28_RS08565 PF07687 Peptidase dimerisation domain ABE28_RS08570 PF03458 UPF0126 domain ABE28_RS08575 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABE28_RS08585 PF00258 Flavodoxin ABE28_RS08595 PF02557 D-alanyl-D-alanine carboxypeptidase ABE28_RS08600 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS08600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS08605 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS08605 PF00072 Response regulator receiver domain ABE28_RS08615 PF03169 OPT oligopeptide transporter protein ABE28_RS08625 PF00158 Sigma-54 interaction domain ABE28_RS08625 PF00989 PAS fold ABE28_RS08625 PF02954 Bacterial regulatory protein, Fis family ABE28_RS08630 PF03606 C4-dicarboxylate anaerobic carrier ABE28_RS08635 PF01979 Amidohydrolase family ABE28_RS08645 PF03575 Peptidase family S51 ABE28_RS08660 PF13537 Glutamine amidotransferase domain ABE28_RS08660 PF00733 Asparagine synthase ABE28_RS08665 PF07702 UTRA domain ABE28_RS08665 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS08670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABE28_RS08675 PF02378 Phosphotransferase system, EIIC ABE28_RS08680 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ABE28_RS08685 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABE28_RS08685 PF02056 Family 4 glycosyl hydrolase ABE28_RS08690 PF04794 YdjC-like protein ABE28_RS08695 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS08700 PF07849 Protein of unknown function (DUF1641) ABE28_RS08715 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABE28_RS08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS08715 PF17203 Single cache domain 3 ABE28_RS08725 PF17209 Hfq protein ABE28_RS08730 PF17866 AAA lid domain ABE28_RS08730 PF00004 ATPase family associated with various cellular activities (AAA) ABE28_RS08735 PF03458 UPF0126 domain ABE28_RS08740 PF01926 50S ribosome-binding GTPase ABE28_RS08740 PF13167 GTP-binding GTPase N-terminal ABE28_RS08740 PF16360 GTP-binding GTPase Middle Region ABE28_RS08745 PF06838 Methionine gamma-lyase ABE28_RS08750 PF13411 MerR HTH family regulatory protein ABE28_RS08755 PF03951 Glutamine synthetase, beta-Grasp domain ABE28_RS08755 PF00120 Glutamine synthetase, catalytic domain ABE28_RS08760 PF00589 Phage integrase family ABE28_RS08760 PF14659 Phage integrase, N-terminal SAM-like domain ABE28_RS08830 PF13443 Cro/C1-type HTH DNA-binding domain ABE28_RS08875 PF00436 Single-strand binding protein family ABE28_RS09005 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABE28_RS09005 PF01476 LysM domain ABE28_RS09075 PF13539 D-alanyl-D-alanine carboxypeptidase ABE28_RS09125 PF07261 Replication initiation and membrane attachment ABE28_RS09155 PF08281 Sigma-70, region 4 ABE28_RS09170 PF09639 YjcQ protein ABE28_RS09185 PF13276 HTH-like domain ABE28_RS09185 PF13333 Integrase core domain ABE28_RS09185 PF00665 Integrase core domain ABE28_RS09290 PF03772 Competence protein ABE28_RS09290 PF13567 Domain of unknown function (DUF4131) ABE28_RS09290 PF00753 Metallo-beta-lactamase superfamily ABE28_RS09315 PF00772 DnaB-like helicase N terminal domain ABE28_RS09315 PF03796 DnaB-like helicase C terminal domain ABE28_RS09355 PF13333 Integrase core domain ABE28_RS09355 PF13276 HTH-like domain ABE28_RS09355 PF00665 Integrase core domain ABE28_RS09395 PF01910 Thiamine-binding protein ABE28_RS09410 PF11188 Protein of unknown function (DUF2975) ABE28_RS09415 PF13443 Cro/C1-type HTH DNA-binding domain ABE28_RS09420 PF05675 Protein of unknown function (DUF817) ABE28_RS09425 PF00268 Ribonucleotide reductase, small chain ABE28_RS09435 PF00072 Response regulator receiver domain ABE28_RS09435 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS09440 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS09455 PF01546 Peptidase family M20/M25/M40 ABE28_RS09460 PF01546 Peptidase family M20/M25/M40 ABE28_RS09460 PF07687 Peptidase dimerisation domain ABE28_RS09465 PF03806 AbgT putative transporter family ABE28_RS09480 PF03845 Spore germination protein ABE28_RS09510 PF13426 PAS domain ABE28_RS09510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS09510 PF08447 PAS fold ABE28_RS09535 PF08239 Bacterial SH3 domain ABE28_RS09535 PF01183 Glycosyl hydrolases family 25 ABE28_RS09540 PF03741 Integral membrane protein TerC family ABE28_RS09555 PF00388 Phosphatidylinositol-specific phospholipase C, X domain ABE28_RS09560 PF02687 FtsX-like permease family ABE28_RS09560 PF12704 MacB-like periplasmic core domain ABE28_RS09565 PF00005 ABC transporter ABE28_RS09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS09570 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS09570 PF00672 HAMP domain ABE28_RS09575 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS09575 PF00072 Response regulator receiver domain ABE28_RS09580 PF03845 Spore germination protein ABE28_RS09585 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS09590 PF05504 Spore germination B3/ GerAC like, C-terminal ABE28_RS09595 PF00072 Response regulator receiver domain ABE28_RS09595 PF00196 Bacterial regulatory proteins, luxR family ABE28_RS09630 PF00106 short chain dehydrogenase ABE28_RS09630 PF00561 alpha/beta hydrolase fold ABE28_RS09635 PF13411 MerR HTH family regulatory protein ABE28_RS09650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABE28_RS09655 PF00149 Calcineurin-like phosphoesterase ABE28_RS09660 PF13302 Acetyltransferase (GNAT) domain ABE28_RS09665 PF03992 Antibiotic biosynthesis monooxygenase ABE28_RS09680 PF01545 Cation efflux family ABE28_RS09680 PF16916 Dimerisation domain of Zinc Transporter ABE28_RS09690 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS09695 PF00171 Aldehyde dehydrogenase family ABE28_RS09700 PF00557 Metallopeptidase family M24 ABE28_RS09700 PF01321 Creatinase/Prolidase N-terminal domain ABE28_RS09705 PF01968 Hydantoinase/oxoprolinase ABE28_RS09705 PF05378 Hydantoinase/oxoprolinase N-terminal region ABE28_RS09730 PF02378 Phosphotransferase system, EIIC ABE28_RS09745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABE28_RS09750 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ABE28_RS09755 PF02525 Flavodoxin-like fold ABE28_RS09760 PF06335 Protein of unknown function (DUF1054) ABE28_RS09765 PF02082 Transcriptional regulator ABE28_RS09770 PF00676 Dehydrogenase E1 component ABE28_RS09775 PF02780 Transketolase, C-terminal domain ABE28_RS09775 PF02779 Transketolase, pyrimidine binding domain ABE28_RS09780 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS09785 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS09790 PF02525 Flavodoxin-like fold ABE28_RS09795 PF13460 NAD(P)H-binding ABE28_RS09800 PF01638 HxlR-like helix-turn-helix ABE28_RS09815 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS09815 PF07702 UTRA domain ABE28_RS09820 PF00171 Aldehyde dehydrogenase family ABE28_RS09830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABE28_RS09830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABE28_RS09840 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABE28_RS09855 PF08713 DNA alkylation repair enzyme ABE28_RS09860 PF02378 Phosphotransferase system, EIIC ABE28_RS09860 PF00367 phosphotransferase system, EIIB ABE28_RS09865 PF16657 Maltogenic Amylase, C-terminal domain ABE28_RS09865 PF00128 Alpha amylase, catalytic domain ABE28_RS09870 PF07702 UTRA domain ABE28_RS09870 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS09875 PF00893 Small Multidrug Resistance protein ABE28_RS09880 PF00893 Small Multidrug Resistance protein ABE28_RS09885 PF02767 DNA polymerase III beta subunit, central domain ABE28_RS09885 PF00712 DNA polymerase III beta subunit, N-terminal domain ABE28_RS09885 PF02768 DNA polymerase III beta subunit, C-terminal domain ABE28_RS09900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS09900 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS09900 PF00989 PAS fold ABE28_RS09900 PF13188 PAS domain ABE28_RS09900 PF13426 PAS domain ABE28_RS09905 PF05036 Sporulation related domain ABE28_RS09905 PF01520 N-acetylmuramoyl-L-alanine amidase ABE28_RS09915 PF00717 Peptidase S24-like ABE28_RS09915 PF01726 LexA DNA binding domain ABE28_RS09940 PF01476 LysM domain ABE28_RS09940 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABE28_RS09945 PF00717 Peptidase S24-like ABE28_RS09945 PF01726 LexA DNA binding domain ABE28_RS09950 PF01476 LysM domain ABE28_RS09955 PF00239 Resolvase, N terminal domain ABE28_RS09960 PF05979 Bacterial protein of unknown function (DUF896) ABE28_RS09965 PF02779 Transketolase, pyrimidine binding domain ABE28_RS09965 PF02780 Transketolase, C-terminal domain ABE28_RS09965 PF00456 Transketolase, thiamine diphosphate binding domain ABE28_RS09970 PF10747 Sporulation inhibitor of replication protein SirA ABE28_RS09975 PF03672 Uncharacterised protein family (UPF0154) ABE28_RS09980 PF06271 RDD family ABE28_RS09995 PF00085 Thioredoxin ABE28_RS10000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABE28_RS10005 PF07681 DoxX ABE28_RS10010 PF01522 Polysaccharide deacetylase ABE28_RS10025 PF02683 Cytochrome C biogenesis protein transmembrane region ABE28_RS10030 PF00072 Response regulator receiver domain ABE28_RS10035 PF07301 Protein of unknown function (DUF1453) ABE28_RS10040 PF04143 Sulphur transport ABE28_RS10045 PF01206 Sulfurtransferase TusA ABE28_RS10055 PF11084 Protein of unknown function (DUF2621) ABE28_RS10060 PF12320 Type 5 capsule protein repressor C-terminal domain ABE28_RS10060 PF00149 Calcineurin-like phosphoesterase ABE28_RS10065 PF13476 AAA domain ABE28_RS10080 PF00501 AMP-binding enzyme ABE28_RS10080 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS10090 PF02803 Thiolase, C-terminal domain ABE28_RS10090 PF00108 Thiolase, N-terminal domain ABE28_RS10100 PF02803 Thiolase, C-terminal domain ABE28_RS10100 PF00108 Thiolase, N-terminal domain ABE28_RS10110 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS10110 PF00501 AMP-binding enzyme ABE28_RS10120 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS10125 PF01791 DeoC/LacD family aldolase ABE28_RS10130 PF07690 Major Facilitator Superfamily ABE28_RS10140 PF00294 pfkB family carbohydrate kinase ABE28_RS10150 PF13686 DsrE/DsrF/DrsH-like family ABE28_RS10160 PF01206 Sulfurtransferase TusA ABE28_RS10160 PF00581 Rhodanese-like domain ABE28_RS10165 PF00581 Rhodanese-like domain ABE28_RS10165 PF00753 Metallo-beta-lactamase superfamily ABE28_RS10170 PF01206 Sulfurtransferase TusA ABE28_RS10175 PF01925 Sulfite exporter TauE/SafE ABE28_RS10180 PF01381 Helix-turn-helix ABE28_RS10180 PF07883 Cupin domain ABE28_RS10185 PF01810 LysE type translocator ABE28_RS10200 PF00881 Nitroreductase family ABE28_RS10210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS10210 PF00672 HAMP domain ABE28_RS10210 PF02743 Cache domain ABE28_RS10215 PF00005 ABC transporter ABE28_RS10215 PF13732 Domain of unknown function (DUF4162) ABE28_RS10235 PF13229 Right handed beta helix region ABE28_RS10240 PF07690 Major Facilitator Superfamily ABE28_RS10255 PF01047 MarR family ABE28_RS10260 PF07690 Major Facilitator Superfamily ABE28_RS10270 PF17151 Periplasmic sensor domain ABE28_RS10270 PF00990 Diguanylate cyclase, GGDEF domain ABE28_RS10290 PF00072 Response regulator receiver domain ABE28_RS10290 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS10295 PF00989 PAS fold ABE28_RS10295 PF18698 Histidine kinase sensor domain ABE28_RS10295 PF00672 HAMP domain ABE28_RS10295 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS10300 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABE28_RS10300 PF13457 GW (Gly-Tryp) dipeptide domain ABE28_RS10305 PF02583 Metal-sensitive transcriptional repressor ABE28_RS10310 PF00403 Heavy-metal-associated domain ABE28_RS10315 PF00403 Heavy-metal-associated domain ABE28_RS10330 PF00005 ABC transporter ABE28_RS10330 PF13732 Domain of unknown function (DUF4162) ABE28_RS10335 PF12679 ABC-2 family transporter protein ABE28_RS10340 PF01098 Cell cycle protein ABE28_RS10345 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS10350 PF01965 DJ-1/PfpI family ABE28_RS10365 PF09423 PhoD-like phosphatase ABE28_RS10365 PF16655 PhoD-like phosphatase, N-terminal domain ABE28_RS10370 PF02416 mttA/Hcf106 family ABE28_RS10375 PF00902 Sec-independent protein translocase protein (TatC) ABE28_RS10385 PF00324 Amino acid permease ABE28_RS10390 PF13419 Haloacid dehalogenase-like hydrolase ABE28_RS10395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABE28_RS10395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABE28_RS10395 PF00205 Thiamine pyrophosphate enzyme, central domain ABE28_RS10400 PF00202 Aminotransferase class-III ABE28_RS10405 PF02585 GlcNAc-PI de-N-acetylase ABE28_RS10410 PF03601 Conserved hypothetical protein 698 ABE28_RS10415 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS10415 PF07840 FadR C-terminal domain ABE28_RS10425 PF01047 MarR family ABE28_RS10430 PF00676 Dehydrogenase E1 component ABE28_RS10435 PF02779 Transketolase, pyrimidine binding domain ABE28_RS10435 PF02780 Transketolase, C-terminal domain ABE28_RS10440 PF04439 Streptomycin adenylyltransferase ABE28_RS10445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABE28_RS10455 PF05593 RHS Repeat ABE28_RS10480 PF02567 Phenazine biosynthesis-like protein ABE28_RS10485 PF08818 Domain of unknown function (DU1801) ABE28_RS10500 PF00293 NUDIX domain ABE28_RS10510 PF07690 Major Facilitator Superfamily ABE28_RS10515 PF01565 FAD binding domain ABE28_RS10525 PF01175 Urocanase Rossmann-like domain ABE28_RS10525 PF17392 Urocanase C-terminal domain ABE28_RS10525 PF17391 Urocanase N-terminal domain ABE28_RS10530 PF01979 Amidohydrolase family ABE28_RS10535 PF07690 Major Facilitator Superfamily ABE28_RS10540 PF00083 Sugar (and other) transporter ABE28_RS10545 PF00221 Aromatic amino acid lyase ABE28_RS10550 PF01266 FAD dependent oxidoreductase ABE28_RS10555 PF03746 LamB/YcsF family ABE28_RS10560 PF01566 Natural resistance-associated macrophage protein ABE28_RS10565 PF07286 Protein of unknown function (DUF1445) ABE28_RS10570 PF02682 Carboxyltransferase domain, subdomain C and D ABE28_RS10575 PF02626 Carboxyltransferase domain, subdomain A and B ABE28_RS10580 PF01614 Bacterial transcriptional regulator ABE28_RS10580 PF09339 IclR helix-turn-helix domain ABE28_RS10595 PF03466 LysR substrate binding domain ABE28_RS10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS10600 PF00491 Arginase family ABE28_RS10605 PF02586 SOS response associated peptidase (SRAP) ABE28_RS10615 PF01235 Sodium:alanine symporter family ABE28_RS10625 PF07685 CobB/CobQ-like glutamine amidotransferase domain ABE28_RS10625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABE28_RS10630 PF00216 Bacterial DNA-binding protein ABE28_RS10635 PF00069 Protein kinase domain ABE28_RS10640 PF18416 N-acetylglucosamine binding protein domain 2 ABE28_RS10640 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ABE28_RS10645 PF03070 TENA/THI-4/PQQC family ABE28_RS10650 PF09819 ABC-type cobalt transport system, permease component ABE28_RS10655 PF00005 ABC transporter ABE28_RS10665 PF02581 Thiamine monophosphate synthase ABE28_RS10670 PF01266 FAD dependent oxidoreductase ABE28_RS10675 PF05690 Thiazole biosynthesis protein ThiG ABE28_RS10675 PF02597 ThiS family ABE28_RS10680 PF05690 Thiazole biosynthesis protein ThiG ABE28_RS10685 PF00899 ThiF family ABE28_RS10690 PF08179 Small acid-soluble spore protein P family ABE28_RS10705 PF00330 Aconitase family (aconitate hydratase) ABE28_RS10705 PF00694 Aconitase C-terminal domain ABE28_RS10710 PF00578 AhpC/TSA family ABE28_RS10715 PF08177 Small acid-soluble spore protein N family ABE28_RS10725 PF03061 Thioesterase superfamily ABE28_RS10735 PF01521 Iron-sulphur cluster biosynthesis ABE28_RS10740 PF09297 NADH pyrophosphatase zinc ribbon domain ABE28_RS10740 PF00293 NUDIX domain ABE28_RS10745 PF14174 YycC-like protein ABE28_RS10755 PF02660 Glycerol-3-phosphate acyltransferase ABE28_RS10760 PF13380 CoA binding domain ABE28_RS10765 PF00986 DNA gyrase B subunit, carboxyl terminus ABE28_RS10765 PF01751 Toprim domain ABE28_RS10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS10765 PF00204 DNA gyrase B ABE28_RS10770 PF03989 DNA gyrase C-terminal domain, beta-propeller ABE28_RS10770 PF00521 DNA gyrase/topoisomerase IV, subunit A ABE28_RS10775 PF00501 AMP-binding enzyme ABE28_RS10775 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS10780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS10780 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS10780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS10785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS10785 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS10785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS10795 PF13452 N-terminal half of MaoC dehydratase ABE28_RS10805 PF00158 Sigma-54 interaction domain ABE28_RS10810 PF01380 SIS domain ABE28_RS10815 PF01380 SIS domain ABE28_RS10815 PF01418 Helix-turn-helix domain, rpiR family ABE28_RS10820 PF02378 Phosphotransferase system, EIIC ABE28_RS10820 PF00367 phosphotransferase system, EIIB ABE28_RS10830 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABE28_RS10830 PF00933 Glycosyl hydrolase family 3 N terminal domain ABE28_RS10835 PF07075 Protein of unknown function (DUF1343) ABE28_RS10840 PF00367 phosphotransferase system, EIIB ABE28_RS10840 PF02378 Phosphotransferase system, EIIC ABE28_RS10850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABE28_RS10850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABE28_RS10855 PF07690 Major Facilitator Superfamily ABE28_RS10865 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS10865 PF00501 AMP-binding enzyme ABE28_RS10875 PF01979 Amidohydrolase family ABE28_RS10880 PF03841 L-seryl-tRNA selenium transferase ABE28_RS10885 PF07071 KDGP aldolase ABE28_RS10895 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS10895 PF07702 UTRA domain ABE28_RS10900 PF02447 GntP family permease ABE28_RS10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS10905 PF03466 LysR substrate binding domain ABE28_RS10910 PF00667 FAD binding domain ABE28_RS10910 PF00258 Flavodoxin ABE28_RS10910 PF00175 Oxidoreductase NAD-binding domain ABE28_RS10915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABE28_RS10915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABE28_RS10925 PF03845 Spore germination protein ABE28_RS10930 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS10935 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS10940 PF03845 Spore germination protein ABE28_RS10945 PF05504 Spore germination B3/ GerAC like, C-terminal ABE28_RS10950 PF01593 Flavin containing amine oxidoreductase ABE28_RS10955 PF01654 Cytochrome bd terminal oxidase subunit I ABE28_RS10960 PF02322 Cytochrome bd terminal oxidase subunit II ABE28_RS10970 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS10975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS10975 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS10975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS10980 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS10980 PF00501 AMP-binding enzyme ABE28_RS10985 PF02785 Biotin carboxylase C-terminal domain ABE28_RS10985 PF00289 Biotin carboxylase, N-terminal domain ABE28_RS10985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABE28_RS10990 PF00364 Biotin-requiring enzyme ABE28_RS10995 PF00682 HMGL-like ABE28_RS11000 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS11005 PF01039 Carboxyl transferase domain ABE28_RS11015 PF00857 Isochorismatase family ABE28_RS11020 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABE28_RS11020 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABE28_RS11020 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ABE28_RS11025 PF02540 NAD synthase ABE28_RS11055 PF16888 Domain of unknown function (DUF5082) ABE28_RS11065 PF00367 phosphotransferase system, EIIB ABE28_RS11065 PF02378 Phosphotransferase system, EIIC ABE28_RS11075 PF05901 Excalibur calcium-binding domain ABE28_RS11075 PF00565 Staphylococcal nuclease homologue ABE28_RS11090 PF13539 D-alanyl-D-alanine carboxypeptidase ABE28_RS11100 PF07690 Major Facilitator Superfamily ABE28_RS11105 PF02378 Phosphotransferase system, EIIC ABE28_RS11105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABE28_RS11110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABE28_RS11110 PF05043 Mga helix-turn-helix domain ABE28_RS11110 PF08279 HTH domain ABE28_RS11110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABE28_RS11110 PF00874 PRD domain ABE28_RS11115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABE28_RS11115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABE28_RS11120 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS11120 PF00107 Zinc-binding dehydrogenase ABE28_RS11145 PF00296 Luciferase-like monooxygenase ABE28_RS11150 PF00583 Acetyltransferase (GNAT) family ABE28_RS11160 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS11160 PF00072 Response regulator receiver domain ABE28_RS11165 PF01497 Periplasmic binding protein ABE28_RS11170 PF01032 FecCD transport family ABE28_RS11175 PF01032 FecCD transport family ABE28_RS11180 PF00005 ABC transporter ABE28_RS11215 PF13039 Protein of unknown function (DUF3900) ABE28_RS11215 PF13037 Domain of unknown function (DUF3898) ABE28_RS11220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS11225 PF02416 mttA/Hcf106 family ABE28_RS11235 PF07690 Major Facilitator Superfamily ABE28_RS11245 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABE28_RS11250 PF00892 EamA-like transporter family ABE28_RS11255 PF12706 Beta-lactamase superfamily domain ABE28_RS11260 PF14171 Toxin SpoIISA, type II toxin-antitoxin system ABE28_RS11270 PF00563 EAL domain ABE28_RS11270 PF00990 Diguanylate cyclase, GGDEF domain ABE28_RS11270 PF03707 Bacterial signalling protein N terminal repeat ABE28_RS11280 PF01679 Proteolipid membrane potential modulator ABE28_RS11310 PF01943 Polysaccharide biosynthesis protein ABE28_RS11320 PF00324 Amino acid permease ABE28_RS11325 PF00491 Arginase family ABE28_RS11340 PF07969 Amidohydrolase family ABE28_RS11345 PF07687 Peptidase dimerisation domain ABE28_RS11345 PF01546 Peptidase family M20/M25/M40 ABE28_RS11350 PF11755 Protein of unknown function (DUF3311) ABE28_RS11355 PF00474 Sodium:solute symporter family ABE28_RS11360 PF00877 NlpC/P60 family ABE28_RS11360 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain ABE28_RS11365 PF10057 Uncharacterized conserved protein (DUF2294) ABE28_RS11370 PF03814 Potassium-transporting ATPase A subunit ABE28_RS11380 PF02669 K+-transporting ATPase, c chain ABE28_RS11385 PF02702 Osmosensitive K+ channel His kinase sensor domain ABE28_RS11390 PF00326 Prolyl oligopeptidase family ABE28_RS11395 PF00999 Sodium/hydrogen exchanger family ABE28_RS11400 PF01209 ubiE/COQ5 methyltransferase family ABE28_RS11425 PF08803 Putative mono-oxygenase ydhR ABE28_RS11455 PF02457 DisA bacterial checkpoint controller nucleotide-binding ABE28_RS11455 PF10372 Bacterial membrane-spanning protein N-terminus ABE28_RS11460 PF00557 Metallopeptidase family M24 ABE28_RS11475 PF01926 50S ribosome-binding GTPase ABE28_RS11475 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABE28_RS11480 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS11480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS11480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS11485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS11485 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS11490 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS11490 PF00501 AMP-binding enzyme ABE28_RS11495 PF03060 Nitronate monooxygenase ABE28_RS11515 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABE28_RS11525 PF00171 Aldehyde dehydrogenase family ABE28_RS11535 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABE28_RS11545 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABE28_RS11545 PF03480 Bacterial extracellular solute-binding protein, family 7 ABE28_RS11550 PF08666 SAF domain ABE28_RS11550 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABE28_RS11555 PF08666 SAF domain ABE28_RS11555 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABE28_RS11565 PF00199 Catalase ABE28_RS11565 PF06628 Catalase-related immune-responsive ABE28_RS11570 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABE28_RS11570 PF02056 Family 4 glycosyl hydrolase ABE28_RS11575 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ABE28_RS11580 PF00480 ROK family ABE28_RS11590 PF02378 Phosphotransferase system, EIIC ABE28_RS11595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABE28_RS11600 PF00232 Glycosyl hydrolase family 1 ABE28_RS11605 PF01380 SIS domain ABE28_RS11605 PF00571 CBS domain ABE28_RS11620 PF08244 Glycosyl hydrolases family 32 C terminal ABE28_RS11620 PF00251 Glycosyl hydrolases family 32 N-terminal domain ABE28_RS11625 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS11630 PF01306 LacY proton/sugar symporter ABE28_RS11640 PF00294 pfkB family carbohydrate kinase ABE28_RS11645 PF08244 Glycosyl hydrolases family 32 C terminal ABE28_RS11645 PF00251 Glycosyl hydrolases family 32 N-terminal domain ABE28_RS11650 PF01306 LacY proton/sugar symporter ABE28_RS11655 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS11665 PF13183 4Fe-4S dicluster domain ABE28_RS11665 PF02754 Cysteine-rich domain ABE28_RS11670 PF01565 FAD binding domain ABE28_RS11670 PF02913 FAD linked oxidases, C-terminal domain ABE28_RS11675 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS11680 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS11685 PF08402 TOBE domain ABE28_RS11685 PF00005 ABC transporter ABE28_RS11700 PF00072 Response regulator receiver domain ABE28_RS11700 PF00158 Sigma-54 interaction domain ABE28_RS11700 PF02954 Bacterial regulatory protein, Fis family ABE28_RS11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS11705 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS11705 PF00989 PAS fold ABE28_RS11720 PF01373 Glycosyl hydrolase family 14 ABE28_RS11720 PF00686 Starch binding domain ABE28_RS11725 PF04308 Ribonuclease H-like ABE28_RS11730 PF10752 Protein of unknown function (DUF2533) ABE28_RS11740 PF07690 Major Facilitator Superfamily ABE28_RS11745 PF00924 Mechanosensitive ion channel ABE28_RS11780 PF01266 FAD dependent oxidoreductase ABE28_RS11785 PF08943 CsiD ABE28_RS11805 PF01266 FAD dependent oxidoreductase ABE28_RS11810 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS11820 PF00589 Phage integrase family ABE28_RS11830 PF07687 Peptidase dimerisation domain ABE28_RS11830 PF01546 Peptidase family M20/M25/M40 ABE28_RS11835 PF00710 Asparaginase, N-terminal ABE28_RS11835 PF17763 Glutaminase/Asparaginase C-terminal domain ABE28_RS11840 PF00474 Sodium:solute symporter family ABE28_RS11855 PF03851 UV-endonuclease UvdE ABE28_RS11865 PF00128 Alpha amylase, catalytic domain ABE28_RS11865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABE28_RS11865 PF17999 Pullulanase N1-terminal domain ABE28_RS11870 PF07724 AAA domain (Cdc48 subfamily) ABE28_RS11870 PF17871 AAA lid domain ABE28_RS11870 PF10431 C-terminal, D2-small domain, of ClpB protein ABE28_RS11870 PF00004 ATPase family associated with various cellular activities (AAA) ABE28_RS11885 PF00877 NlpC/P60 family ABE28_RS11885 PF01476 LysM domain ABE28_RS11905 PF03466 LysR substrate binding domain ABE28_RS11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS11910 PF03601 Conserved hypothetical protein 698 ABE28_RS11915 PF02675 S-adenosylmethionine decarboxylase ABE28_RS11920 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS11925 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABE28_RS11930 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS11935 PF00005 ABC transporter ABE28_RS11935 PF00571 CBS domain ABE28_RS11945 PF07690 Major Facilitator Superfamily ABE28_RS11965 PF13460 NAD(P)H-binding ABE28_RS11970 PF00300 Histidine phosphatase superfamily (branch 1) ABE28_RS11980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABE28_RS11995 PF03372 Endonuclease/Exonuclease/phosphatase family ABE28_RS12000 PF13396 Phospholipase_D-nuclease N-terminal ABE28_RS12000 PF13091 PLD-like domain ABE28_RS12005 PF08323 Starch synthase catalytic domain ABE28_RS12005 PF00534 Glycosyl transferases group 1 ABE28_RS12010 PF00483 Nucleotidyl transferase ABE28_RS12015 PF00132 Bacterial transferase hexapeptide (six repeats) ABE28_RS12015 PF00483 Nucleotidyl transferase ABE28_RS12020 PF00128 Alpha amylase, catalytic domain ABE28_RS12020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABE28_RS12020 PF02806 Alpha amylase, C-terminal all-beta domain ABE28_RS12030 PF03167 Uracil DNA glycosylase superfamily ABE28_RS12050 PF01925 Sulfite exporter TauE/SafE ABE28_RS12055 PF14824 Sirohaem biosynthesis protein central ABE28_RS12060 PF01903 CbiX ABE28_RS12065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABE28_RS12075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABE28_RS12075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABE28_RS12085 PF14306 PUA-like domain ABE28_RS12085 PF01747 ATP-sulfurylase ABE28_RS12090 PF01507 Phosphoadenosine phosphosulfate reductase family ABE28_RS12100 PF03358 NADPH-dependent FMN reductase ABE28_RS12105 PF01174 SNO glutamine amidotransferase family ABE28_RS12110 PF01680 SOR/SNZ family ABE28_RS12115 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS12115 PF00155 Aminotransferase class I and II ABE28_RS12120 PF00291 Pyridoxal-phosphate dependent enzyme ABE28_RS12125 PF00425 chorismate binding enzyme ABE28_RS12125 PF04715 Anthranilate synthase component I, N terminal region ABE28_RS12130 PF00296 Luciferase-like monooxygenase ABE28_RS12135 PF00296 Luciferase-like monooxygenase ABE28_RS12145 PF08439 Oligopeptidase F ABE28_RS12145 PF01432 Peptidase family M3 ABE28_RS12150 PF02525 Flavodoxin-like fold ABE28_RS12155 PF08892 YqcI/YcgG family ABE28_RS12160 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABE28_RS12165 PF00465 Iron-containing alcohol dehydrogenase ABE28_RS12170 PF00268 Ribonucleotide reductase, small chain ABE28_RS12175 PF00072 Response regulator receiver domain ABE28_RS12175 PF00196 Bacterial regulatory proteins, luxR family ABE28_RS12185 PF01063 Amino-transferase class IV ABE28_RS12190 PF01594 AI-2E family transporter ABE28_RS12200 PF03734 L,D-transpeptidase catalytic domain ABE28_RS12220 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS12225 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS12230 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABE28_RS12235 PF00005 ABC transporter ABE28_RS12245 PF03547 Membrane transport protein ABE28_RS12250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABE28_RS12260 PF10282 Lactonase, 7-bladed beta-propeller ABE28_RS12275 PF00202 Aminotransferase class-III ABE28_RS12280 PF00171 Aldehyde dehydrogenase family ABE28_RS12285 PF13302 Acetyltransferase (GNAT) domain ABE28_RS12290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABE28_RS12295 PF00313 'Cold-shock' DNA-binding domain ABE28_RS12300 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS12310 PF00005 ABC transporter ABE28_RS12310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABE28_RS12315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABE28_RS12315 PF00005 ABC transporter ABE28_RS12320 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS12320 PF12911 N-terminal TM domain of oligopeptide transport permease C ABE28_RS12325 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS12330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABE28_RS12390 PF05593 RHS Repeat ABE28_RS12405 PF00188 Cysteine-rich secretory protein family ABE28_RS12415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABE28_RS12415 PF00929 Exonuclease ABE28_RS12415 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABE28_RS12415 PF02811 PHP domain ABE28_RS12415 PF14579 Helix-hairpin-helix motif ABE28_RS12435 PF16916 Dimerisation domain of Zinc Transporter ABE28_RS12435 PF01545 Cation efflux family ABE28_RS12445 PF00324 Amino acid permease ABE28_RS12450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS12450 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS12450 PF00989 PAS fold ABE28_RS12455 PF10127 RNA repair pathway DNA polymerase beta family ABE28_RS12460 PF03741 Integral membrane protein TerC family ABE28_RS12465 PF08125 Mannitol dehydrogenase C-terminal domain ABE28_RS12465 PF01232 Mannitol dehydrogenase Rossmann domain ABE28_RS12470 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS12470 PF00107 Zinc-binding dehydrogenase ABE28_RS12475 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABE28_RS12475 PF08666 SAF domain ABE28_RS12480 PF12833 Helix-turn-helix domain ABE28_RS12480 PF06445 GyrI-like small molecule binding domain ABE28_RS12485 PF07690 Major Facilitator Superfamily ABE28_RS12490 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS12495 PF00106 short chain dehydrogenase ABE28_RS12500 PF03786 D-mannonate dehydratase (UxuA) ABE28_RS12505 PF01081 KDPG and KHG aldolase ABE28_RS12510 PF00107 Zinc-binding dehydrogenase ABE28_RS12510 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS12515 PF02615 Malate/L-lactate dehydrogenase ABE28_RS12520 PF00294 pfkB family carbohydrate kinase ABE28_RS12530 PF01747 ATP-sulfurylase ABE28_RS12530 PF14306 PUA-like domain ABE28_RS12540 PF01925 Sulfite exporter TauE/SafE ABE28_RS12545 PF00535 Glycosyl transferase family 2 ABE28_RS12550 PF00534 Glycosyl transferases group 1 ABE28_RS12550 PF00862 Sucrose synthase ABE28_RS12560 PF00535 Glycosyl transferase family 2 ABE28_RS12565 PF16363 GDP-mannose 4,6 dehydratase ABE28_RS12580 PF00534 Glycosyl transferases group 1 ABE28_RS12580 PF13439 Glycosyltransferase Family 4 ABE28_RS12585 PF16363 GDP-mannose 4,6 dehydratase ABE28_RS12595 PF02719 Polysaccharide biosynthesis protein ABE28_RS12600 PF02350 UDP-N-acetylglucosamine 2-epimerase ABE28_RS12605 PF13460 NAD(P)H-binding ABE28_RS12610 PF00005 ABC transporter ABE28_RS12610 PF00664 ABC transporter transmembrane region ABE28_RS12620 PF00704 Glycosyl hydrolases family 18 ABE28_RS12620 PF01476 LysM domain ABE28_RS12625 PF00106 short chain dehydrogenase ABE28_RS12630 PF13091 PLD-like domain ABE28_RS12630 PF13396 Phospholipase_D-nuclease N-terminal ABE28_RS12635 PF02583 Metal-sensitive transcriptional repressor ABE28_RS12650 PF01613 Flavin reductase like domain ABE28_RS12655 PF01738 Dienelactone hydrolase family ABE28_RS12660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABE28_RS12665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABE28_RS12690 PF02566 OsmC-like protein ABE28_RS12695 PF03698 Uncharacterised protein family (UPF0180) ABE28_RS12715 PF02898 Nitric oxide synthase, oxygenase domain ABE28_RS12720 PF01638 HxlR-like helix-turn-helix ABE28_RS12725 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS12740 PF00326 Prolyl oligopeptidase family ABE28_RS12740 PF07676 WD40-like Beta Propeller Repeat ABE28_RS12745 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS12745 PF03717 Penicillin-binding Protein dimerisation domain ABE28_RS12755 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS12755 PF05223 NTF2-like N-terminal transpeptidase domain ABE28_RS12755 PF03717 Penicillin-binding Protein dimerisation domain ABE28_RS12760 PF03965 Penicillinase repressor ABE28_RS12765 PF05569 BlaR1 peptidase M56 ABE28_RS12765 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS12770 PF00571 CBS domain ABE28_RS12775 PF00753 Metallo-beta-lactamase superfamily ABE28_RS12780 PF12679 ABC-2 family transporter protein ABE28_RS12785 PF00005 ABC transporter ABE28_RS12795 PF12832 MFS_1 like family ABE28_RS12800 PF13426 PAS domain ABE28_RS12800 PF13188 PAS domain ABE28_RS12800 PF00989 PAS fold ABE28_RS12800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS12800 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS12805 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABE28_RS12805 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABE28_RS12820 PF00270 DEAD/DEAH box helicase ABE28_RS12820 PF16124 RecQ zinc-binding ABE28_RS12820 PF09382 RQC domain ABE28_RS12820 PF00570 HRDC domain ABE28_RS12820 PF00271 Helicase conserved C-terminal domain ABE28_RS12825 PF01476 LysM domain ABE28_RS12825 PF06725 3D domain ABE28_RS12830 PF11007 Spore coat associated protein JA (CotJA) ABE28_RS12835 PF12652 CotJB protein ABE28_RS12840 PF05067 Manganese containing catalase ABE28_RS12845 PF13509 S1 domain ABE28_RS12845 PF17783 CvfB-like winged helix domain ABE28_RS12850 PF13426 PAS domain ABE28_RS12850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS12850 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS12850 PF00672 HAMP domain ABE28_RS12855 PF00072 Response regulator receiver domain ABE28_RS12855 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS12860 PF00990 Diguanylate cyclase, GGDEF domain ABE28_RS12860 PF00072 Response regulator receiver domain ABE28_RS12865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABE28_RS12865 PF01411 tRNA synthetases class II (A) ABE28_RS12865 PF02272 DHHA1 domain ABE28_RS12885 PF13538 UvrD-like helicase C-terminal domain ABE28_RS12895 PF12848 ABC transporter ABE28_RS12895 PF00005 ABC transporter ABE28_RS12905 PF15975 Flotillin ABE28_RS12905 PF01145 SPFH domain / Band 7 family ABE28_RS12915 PF02632 BioY family ABE28_RS12925 PF03006 Haemolysin-III related ABE28_RS12930 PF01022 Bacterial regulatory protein, arsR family ABE28_RS12935 PF07486 Cell Wall Hydrolase ABE28_RS12945 PF01894 Uncharacterised protein family UPF0047 ABE28_RS12955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABE28_RS12955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABE28_RS12960 PF00294 pfkB family carbohydrate kinase ABE28_RS12965 PF00455 DeoR C terminal sensor domain ABE28_RS12965 PF08220 DeoR-like helix-turn-helix domain ABE28_RS12970 PF00364 Biotin-requiring enzyme ABE28_RS12970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABE28_RS12970 PF02817 e3 binding domain ABE28_RS12975 PF16870 2-oxoglutarate dehydrogenase C-terminal ABE28_RS12975 PF02779 Transketolase, pyrimidine binding domain ABE28_RS12975 PF00676 Dehydrogenase E1 component ABE28_RS12980 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABE28_RS12985 PF03422 Carbohydrate binding module (family 6) ABE28_RS12985 PF00457 Glycosyl hydrolases family 11 ABE28_RS12985 PF01522 Polysaccharide deacetylase ABE28_RS12990 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABE28_RS12990 PF02310 B12 binding domain ABE28_RS12990 PF02607 B12 binding domain ABE28_RS12990 PF00809 Pterin binding enzyme ABE28_RS12990 PF02574 Homocysteine S-methyltransferase ABE28_RS12995 PF02219 Methylenetetrahydrofolate reductase ABE28_RS12995 PF02574 Homocysteine S-methyltransferase ABE28_RS13000 PF03473 MOSC domain ABE28_RS13000 PF03475 3-alpha domain ABE28_RS13005 PF02735 Ku70/Ku80 beta-barrel domain ABE28_RS13010 PF01068 ATP dependent DNA ligase domain ABE28_RS13015 PF01678 Diaminopimelate epimerase ABE28_RS13020 PF00860 Permease family ABE28_RS13025 PF00484 Carbonic anhydrase ABE28_RS13045 PF02673 Bacitracin resistance protein BacA ABE28_RS13055 PF03788 LrgA family ABE28_RS13060 PF04172 LrgB-like family ABE28_RS13065 PF04101 Glycosyltransferase family 28 C-terminal domain ABE28_RS13065 PF03033 Glycosyltransferase family 28 N-terminal domain ABE28_RS13070 PF00924 Mechanosensitive ion channel ABE28_RS13075 PF01554 MatE ABE28_RS13090 PF00188 Cysteine-rich secretory protein family ABE28_RS13100 PF16736 Single Cache-like ABE28_RS13100 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS13100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS13100 PF00989 PAS fold ABE28_RS13105 PF00072 Response regulator receiver domain ABE28_RS13105 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS13125 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABE28_RS13125 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABE28_RS13130 PF03079 ARD/ARD' family ABE28_RS13135 PF00596 Class II Aldolase and Adducin N-terminal domain ABE28_RS13145 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain ABE28_RS13145 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain ABE28_RS13150 PF00155 Aminotransferase class I and II ABE28_RS13155 PF00795 Carbon-nitrogen hydrolase ABE28_RS13160 PF01636 Phosphotransferase enzyme family ABE28_RS13165 PF01008 Initiation factor 2 subunit family ABE28_RS13175 PF17820 PDZ domain ABE28_RS13175 PF03572 Peptidase family S41 ABE28_RS13175 PF01471 Putative peptidoglycan binding domain ABE28_RS13185 PF01048 Phosphorylase superfamily ABE28_RS13190 PF14162 YozD-like protein ABE28_RS13230 PF13276 HTH-like domain ABE28_RS13230 PF00665 Integrase core domain ABE28_RS13230 PF13333 Integrase core domain ABE28_RS13240 PF13188 PAS domain ABE28_RS13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS13240 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS13240 PF00989 PAS fold ABE28_RS13240 PF13426 PAS domain ABE28_RS13245 PF06855 YozE SAM-like fold ABE28_RS13250 PF14122 YokU-like protein, putative antitoxin ABE28_RS13255 PF12544 Lysine-2,3-aminomutase ABE28_RS13260 PF00158 Sigma-54 interaction domain ABE28_RS13260 PF13426 PAS domain ABE28_RS13260 PF02954 Bacterial regulatory protein, Fis family ABE28_RS13265 PF00583 Acetyltransferase (GNAT) family ABE28_RS13270 PF01546 Peptidase family M20/M25/M40 ABE28_RS13270 PF07687 Peptidase dimerisation domain ABE28_RS13275 PF01144 Coenzyme A transferase ABE28_RS13280 PF01144 Coenzyme A transferase ABE28_RS13285 PF00202 Aminotransferase class-III ABE28_RS13295 PF02016 LD-carboxypeptidase N-terminal domain ABE28_RS13295 PF17676 LD-carboxypeptidase C-terminal domain ABE28_RS13310 PF01641 SelR domain ABE28_RS13315 PF01625 Peptide methionine sulfoxide reductase ABE28_RS13325 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) ABE28_RS13335 PF02630 SCO1/SenC ABE28_RS13340 PF02645 Uncharacterised protein, DegV family COG1307 ABE28_RS13350 PF00902 Sec-independent protein translocase protein (TatC) ABE28_RS13355 PF02416 mttA/Hcf106 family ABE28_RS13360 PF00291 Pyridoxal-phosphate dependent enzyme ABE28_RS13360 PF00585 C-terminal regulatory domain of Threonine dehydratase ABE28_RS13365 PF00186 Dihydrofolate reductase ABE28_RS13370 PF00303 Thymidylate synthase ABE28_RS13385 PF01872 RibD C-terminal domain ABE28_RS13390 PF03741 Integral membrane protein TerC family ABE28_RS13395 PF14005 YpjP-like protein ABE28_RS13405 PF04445 Putative SAM-dependent methyltransferase ABE28_RS13410 PF06491 Disulphide isomerase ABE28_RS13425 PF00920 Dehydratase family ABE28_RS13430 PF08712 Scaffold protein Nfu/NifU N terminal ABE28_RS13430 PF13769 Virulence factor ABE28_RS13435 PF16326 ABC transporter C-terminal domain ABE28_RS13435 PF00005 ABC transporter ABE28_RS13435 PF12848 ABC transporter ABE28_RS13440 PF01966 HD domain ABE28_RS13445 PF02645 Uncharacterised protein, DegV family COG1307 ABE28_RS13450 PF00255 Glutathione peroxidase ABE28_RS13460 PF04204 Homoserine O-succinyltransferase ABE28_RS13470 PF01209 ubiE/COQ5 methyltransferase family ABE28_RS13480 PF01325 Iron dependent repressor, N-terminal DNA binding domain ABE28_RS13480 PF02742 Iron dependent repressor, metal binding and dimerisation domain ABE28_RS13485 PF01751 Toprim domain ABE28_RS13485 PF01396 Topoisomerase DNA binding C4 zinc finger ABE28_RS13485 PF01131 DNA topoisomerase ABE28_RS13485 PF13342 C-terminal repeat of topoisomerase ABE28_RS13495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABE28_RS13495 PF02378 Phosphotransferase system, EIIC ABE28_RS13500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABE28_RS13505 PF01232 Mannitol dehydrogenase Rossmann domain ABE28_RS13505 PF08125 Mannitol dehydrogenase C-terminal domain ABE28_RS13510 PF01380 SIS domain ABE28_RS13515 PF00834 Ribulose-phosphate 3 epimerase family ABE28_RS13520 PF00455 DeoR C terminal sensor domain ABE28_RS13520 PF08220 DeoR-like helix-turn-helix domain ABE28_RS13530 PF05163 DinB family ABE28_RS13550 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABE28_RS13555 PF00171 Aldehyde dehydrogenase family ABE28_RS13565 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS13570 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS13580 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS13585 PF01791 DeoC/LacD family aldolase ABE28_RS13590 PF00294 pfkB family carbohydrate kinase ABE28_RS13595 PF01380 SIS domain ABE28_RS13600 PF00480 ROK family ABE28_RS13605 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS13610 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS13615 PF01547 Bacterial extracellular solute-binding protein ABE28_RS13625 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS13630 PF07702 UTRA domain ABE28_RS13630 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS13640 PF00480 ROK family ABE28_RS13650 PF00881 Nitroreductase family ABE28_RS13655 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS13655 PF07702 UTRA domain ABE28_RS13660 PF01418 Helix-turn-helix domain, rpiR family ABE28_RS13660 PF01380 SIS domain ABE28_RS13665 PF01869 BadF/BadG/BcrA/BcrD ATPase family ABE28_RS13675 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ABE28_RS13680 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABE28_RS13680 PF02056 Family 4 glycosyl hydrolase ABE28_RS13690 PF02378 Phosphotransferase system, EIIC ABE28_RS13700 PF13580 SIS domain ABE28_RS13705 PF02638 Glycosyl hydrolase-like 10 ABE28_RS13710 PF03702 Anhydro-N-acetylmuramic acid kinase ABE28_RS13715 PF00324 Amino acid permease ABE28_RS13720 PF01546 Peptidase family M20/M25/M40 ABE28_RS13720 PF07687 Peptidase dimerisation domain ABE28_RS13725 PF03606 C4-dicarboxylate anaerobic carrier ABE28_RS13730 PF01546 Peptidase family M20/M25/M40 ABE28_RS13745 PF01614 Bacterial transcriptional regulator ABE28_RS13745 PF09339 IclR helix-turn-helix domain ABE28_RS13755 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABE28_RS13755 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABE28_RS13760 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ABE28_RS13765 PF03613 PTS system mannose/fructose/sorbose family IID component ABE28_RS13770 PF03830 PTS system sorbose subfamily IIB component ABE28_RS13780 PF01380 SIS domain ABE28_RS13780 PF01418 Helix-turn-helix domain, rpiR family ABE28_RS13785 PF00324 Amino acid permease ABE28_RS13790 PF00491 Arginase family ABE28_RS13795 PF12796 Ankyrin repeats (3 copies) ABE28_RS13800 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS13800 PF00072 Response regulator receiver domain ABE28_RS13805 PF00672 HAMP domain ABE28_RS13805 PF13426 PAS domain ABE28_RS13805 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS13805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS13810 PF01593 Flavin containing amine oxidoreductase ABE28_RS13820 PF01593 Flavin containing amine oxidoreductase ABE28_RS13850 PF00171 Aldehyde dehydrogenase family ABE28_RS13855 PF00696 Amino acid kinase family ABE28_RS13855 PF01472 PUA domain ABE28_RS13865 PF00175 Oxidoreductase NAD-binding domain ABE28_RS13865 PF00042 Globin ABE28_RS13865 PF00970 Oxidoreductase FAD-binding domain ABE28_RS13870 PF02082 Transcriptional regulator ABE28_RS13875 PF01966 HD domain ABE28_RS13880 PF10782 Zinc-finger ABE28_RS13885 PF13456 Reverse transcriptase-like ABE28_RS13890 PF13456 Reverse transcriptase-like ABE28_RS13905 PF01367 5'-3' exonuclease, C-terminal SAM fold ABE28_RS13905 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABE28_RS13910 PF00581 Rhodanese-like domain ABE28_RS13920 PF00350 Dynamin family ABE28_RS13925 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ABE28_RS13930 PF00195 Chalcone and stilbene synthases, N-terminal domain ABE28_RS13930 PF02797 Chalcone and stilbene synthases, C-terminal domain ABE28_RS13940 PF00860 Permease family ABE28_RS13945 PF00156 Phosphoribosyl transferase domain ABE28_RS13950 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ABE28_RS13955 PF13307 Helicase C-terminal domain ABE28_RS13965 PF00313 'Cold-shock' DNA-binding domain ABE28_RS13970 PF01170 Putative RNA methylase family UPF0020 ABE28_RS13970 PF02926 THUMP domain ABE28_RS13985 PF05103 DivIVA protein ABE28_RS13990 PF06908 YspA SLOG family ABE28_RS13995 PF11122 Inner spore coat protein D ABE28_RS14000 PF13482 RNase_H superfamily ABE28_RS14005 PF00270 DEAD/DEAH box helicase ABE28_RS14005 PF09369 Domain of unknown function (DUF1998) ABE28_RS14005 PF00271 Helicase conserved C-terminal domain ABE28_RS14010 PF00561 alpha/beta hydrolase fold ABE28_RS14015 PF00011 Hsp20/alpha crystallin family ABE28_RS14035 PF10720 Protein of unknown function (DUF2515) ABE28_RS14040 PF03838 Recombination protein U ABE28_RS14045 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS14045 PF00912 Transglycosylase ABE28_RS14055 PF00633 Helix-hairpin-helix motif ABE28_RS14055 PF00730 HhH-GPD superfamily base excision DNA repair protein ABE28_RS14055 PF10576 Iron-sulfur binding domain of endonuclease III ABE28_RS14060 PF07261 Replication initiation and membrane attachment ABE28_RS14065 PF00152 tRNA synthetases class II (D, K and N) ABE28_RS14065 PF01336 OB-fold nucleic acid binding domain ABE28_RS14070 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABE28_RS14075 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABE28_RS14085 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ABE28_RS14085 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ABE28_RS14090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABE28_RS14095 PF00171 Aldehyde dehydrogenase family ABE28_RS14100 PF00701 Dihydrodipicolinate synthetase family ABE28_RS14110 PF00155 Aminotransferase class I and II ABE28_RS14115 PF03413 Peptidase propeptide and YPEB domain ABE28_RS14115 PF17881 Domain of unknown function (DUF5590) ABE28_RS14120 PF14084 Protein of unknown function (DUF4264) ABE28_RS14125 PF00929 Exonuclease ABE28_RS14125 PF13307 Helicase C-terminal domain ABE28_RS14125 PF04851 Type III restriction enzyme, res subunit ABE28_RS14130 PF02261 Aspartate decarboxylase ABE28_RS14135 PF02569 Pantoate-beta-alanine ligase ABE28_RS14140 PF02548 Ketopantoate hydroxymethyltransferase ABE28_RS14145 PF02237 Biotin protein ligase C terminal domain ABE28_RS14145 PF03099 Biotin/lipoate A/B protein ligase family ABE28_RS14145 PF08279 HTH domain ABE28_RS14150 PF12627 Probable RNA and SrmB- binding site of polymerase A ABE28_RS14150 PF13735 tRNA nucleotidyltransferase domain 2 putative ABE28_RS14150 PF01743 Poly A polymerase head domain ABE28_RS14155 PF13439 Glycosyltransferase Family 4 ABE28_RS14155 PF00534 Glycosyl transferases group 1 ABE28_RS14160 PF02585 GlcNAc-PI de-N-acetylase ABE28_RS14165 PF02142 MGS-like domain ABE28_RS14170 PF05173 Dihydrodipicolinate reductase, C-terminus ABE28_RS14170 PF01113 Dihydrodipicolinate reductase, N-terminus ABE28_RS14175 PF03819 MazG nucleotide pyrophosphohydrolase domain ABE28_RS14180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABE28_RS14180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABE28_RS14185 PF04298 Putative neutral zinc metallopeptidase ABE28_RS14190 PF09577 Sporulation protein YpjB (SpoYpjB) ABE28_RS14195 PF07187 Protein of unknown function (DUF1405) ABE28_RS14200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABE28_RS14200 PF00032 Cytochrome b(C-terminal)/b6/petD ABE28_RS14205 PF00033 Cytochrome b/b6/petB ABE28_RS14210 PF00355 Rieske [2Fe-2S] domain ABE28_RS14215 PF10673 Protein of unknown function (DUF2487) ABE28_RS14220 PF08864 UPF0302 domain ABE28_RS14220 PF08858 IDEAL domain ABE28_RS14230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABE28_RS14235 PF01842 ACT domain ABE28_RS14235 PF02153 Prephenate dehydrogenase ABE28_RS14240 PF00155 Aminotransferase class I and II ABE28_RS14245 PF07736 Chorismate mutase type I ABE28_RS14250 PF01761 3-dehydroquinate synthase ABE28_RS14255 PF01264 Chorismate synthase ABE28_RS14260 PF03705 CheR methyltransferase, all-alpha domain ABE28_RS14260 PF01739 CheR methyltransferase, SAM binding domain ABE28_RS14265 PF00334 Nucleoside diphosphate kinase ABE28_RS14270 PF00348 Polyprenyl synthetase ABE28_RS14275 PF01209 ubiE/COQ5 methyltransferase family ABE28_RS14280 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 ABE28_RS14285 PF02081 Tryptophan RNA-binding attenuator protein ABE28_RS14290 PF01227 GTP cyclohydrolase I ABE28_RS14295 PF00216 Bacterial DNA-binding protein ABE28_RS14300 PF09547 Stage IV sporulation protein A (spore_IV_A) ABE28_RS14310 PF10966 Protein of unknown function (DUF2768) ABE28_RS14315 PF00202 Aminotransferase class-III ABE28_RS14320 PF02954 Bacterial regulatory protein, Fis family ABE28_RS14320 PF00158 Sigma-54 interaction domain ABE28_RS14320 PF00989 PAS fold ABE28_RS14325 PF00324 Amino acid permease ABE28_RS14330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABE28_RS14330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABE28_RS14335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABE28_RS14335 PF01926 50S ribosome-binding GTPase ABE28_RS14345 PF14140 YpzI-like protein ABE28_RS14350 PF01070 FMN-dependent dehydrogenase ABE28_RS14355 PF00575 S1 RNA binding domain ABE28_RS14360 PF01553 Acyltransferase ABE28_RS14365 PF02224 Cytidylate kinase ABE28_RS14370 PF17313 Family of unknown function (DUF5359) ABE28_RS14380 PF03413 Peptidase propeptide and YPEB domain ABE28_RS14380 PF14620 YpeB sporulation ABE28_RS14385 PF01471 Putative peptidoglycan binding domain ABE28_RS14385 PF07486 Cell Wall Hydrolase ABE28_RS14390 PF13367 PrsW family intramembrane metalloprotease ABE28_RS14395 PF17763 Glutaminase/Asparaginase C-terminal domain ABE28_RS14395 PF00710 Asparaginase, N-terminal ABE28_RS14405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABE28_RS14405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABE28_RS14410 PF05389 Negative regulator of genetic competence (MecA) ABE28_RS14415 PF13411 MerR HTH family regulatory protein ABE28_RS14415 PF02310 B12 binding domain ABE28_RS14415 PF02607 B12 binding domain ABE28_RS14420 PF00149 Calcineurin-like phosphoesterase ABE28_RS14425 PF10864 Protein of unknown function (DUF2663) ABE28_RS14430 PF01476 LysM domain ABE28_RS14435 PF02517 CPBP intramembrane metalloprotease ABE28_RS14440 PF00271 Helicase conserved C-terminal domain ABE28_RS14440 PF00270 DEAD/DEAH box helicase ABE28_RS14445 PF14493 Helix-turn-helix domain ABE28_RS14455 PF12822 ECF transporter, substrate-specific component ABE28_RS14460 PF01842 ACT domain ABE28_RS14460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABE28_RS14460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABE28_RS14470 PF04542 Sigma-70 region 2 ABE28_RS14470 PF08281 Sigma-70, region 4 ABE28_RS14475 PF18698 Histidine kinase sensor domain ABE28_RS14475 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS14475 PF00672 HAMP domain ABE28_RS14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS14475 PF00989 PAS fold ABE28_RS14480 PF00072 Response regulator receiver domain ABE28_RS14480 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS14485 PF01578 Cytochrome C assembly protein ABE28_RS14490 PF05140 ResB-like family ABE28_RS14495 PF00578 AhpC/TSA family ABE28_RS14500 PF01479 S4 domain ABE28_RS14500 PF00849 RNA pseudouridylate synthase ABE28_RS14505 PF07670 Nucleoside recognition ABE28_RS14510 PF07670 Nucleoside recognition ABE28_RS14515 PF00768 D-alanyl-D-alanine carboxypeptidase ABE28_RS14515 PF07943 Penicillin-binding protein 5, C-terminal domain ABE28_RS14520 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS14525 PF00578 AhpC/TSA family ABE28_RS14530 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABE28_RS14530 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABE28_RS14535 PF13047 Protein of unknown function (DUF3907) ABE28_RS14545 PF04079 Segregation and condensation complex subunit ScpB ABE28_RS14550 PF02616 Segregation and condensation protein ScpA ABE28_RS14555 PF03745 Domain of unknown function (DUF309) ABE28_RS14560 PF00583 Acetyltransferase (GNAT) family ABE28_RS14565 PF06207 Protein of unknown function (DUF1002) ABE28_RS14570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABE28_RS14570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABE28_RS14575 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS14580 PF14097 Stage V sporulation protein AE1 ABE28_RS14585 PF13782 Stage V sporulation protein AB ABE28_RS14590 PF12164 Stage V sporulation protein AA ABE28_RS14595 PF00860 Permease family ABE28_RS14600 PF04542 Sigma-70 region 2 ABE28_RS14600 PF04545 Sigma-70, region 4 ABE28_RS14600 PF04539 Sigma-70 region 3 ABE28_RS14605 PF13581 Histidine kinase-like ATPase domain ABE28_RS14610 PF01740 STAS domain ABE28_RS14615 PF00768 D-alanyl-D-alanine carboxypeptidase ABE28_RS14615 PF07943 Penicillin-binding protein 5, C-terminal domain ABE28_RS14620 PF02885 Glycosyl transferase family, helical bundle domain ABE28_RS14620 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ABE28_RS14620 PF00591 Glycosyl transferase family, a/b domain ABE28_RS14625 PF01048 Phosphorylase superfamily ABE28_RS14630 PF01676 Metalloenzyme superfamily ABE28_RS14635 PF02899 Phage integrase, N-terminal SAM-like domain ABE28_RS14635 PF00589 Phage integrase family ABE28_RS14640 PF14004 Protein of unknown function (DUF4227) ABE28_RS14645 PF01475 Ferric uptake regulator family ABE28_RS14650 PF01944 Stage II sporulation protein M ABE28_RS14665 PF00293 NUDIX domain ABE28_RS14670 PF00248 Aldo/keto reductase family ABE28_RS14675 PF02566 OsmC-like protein ABE28_RS14680 PF01047 MarR family ABE28_RS14690 PF12146 Serine aminopeptidase, S33 ABE28_RS14695 PF01521 Iron-sulphur cluster biosynthesis ABE28_RS14700 PF08863 YolD-like protein ABE28_RS14705 PF11799 impB/mucB/samB family C-terminal domain ABE28_RS14705 PF00817 impB/mucB/samB family ABE28_RS14705 PF11798 IMS family HHH motif ABE28_RS14710 PF01476 LysM domain ABE28_RS14710 PF00877 NlpC/P60 family ABE28_RS14725 PF00106 short chain dehydrogenase ABE28_RS14730 PF00753 Metallo-beta-lactamase superfamily ABE28_RS14735 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABE28_RS14735 PF03807 NADP oxidoreductase coenzyme F420-dependent ABE28_RS14745 PF13411 MerR HTH family regulatory protein ABE28_RS14750 PF00005 ABC transporter ABE28_RS14770 PF00753 Metallo-beta-lactamase superfamily ABE28_RS14770 PF12706 Beta-lactamase superfamily domain ABE28_RS14775 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ABE28_RS14775 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ABE28_RS14785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABE28_RS14785 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ABE28_RS14790 PF11798 IMS family HHH motif ABE28_RS14790 PF11799 impB/mucB/samB family C-terminal domain ABE28_RS14790 PF00817 impB/mucB/samB family ABE28_RS14795 PF07687 Peptidase dimerisation domain ABE28_RS14795 PF01546 Peptidase family M20/M25/M40 ABE28_RS14800 PF01039 Carboxyl transferase domain ABE28_RS14810 PF03734 L,D-transpeptidase catalytic domain ABE28_RS14815 PF06081 Aromatic acid exporter family member 1 ABE28_RS14815 PF11728 Putative aromatic acid exporter C-terminal domain ABE28_RS14820 PF00005 ABC transporter ABE28_RS14825 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS14830 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABE28_RS14835 PF06491 Disulphide isomerase ABE28_RS14845 PF01642 Methylmalonyl-CoA mutase ABE28_RS14845 PF02310 B12 binding domain ABE28_RS14850 PF01642 Methylmalonyl-CoA mutase ABE28_RS14855 PF02817 e3 binding domain ABE28_RS14855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABE28_RS14855 PF00364 Biotin-requiring enzyme ABE28_RS14860 PF02779 Transketolase, pyrimidine binding domain ABE28_RS14860 PF02780 Transketolase, C-terminal domain ABE28_RS14865 PF00676 Dehydrogenase E1 component ABE28_RS14870 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS14870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABE28_RS14875 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABE28_RS14875 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABE28_RS14880 PF00158 Sigma-54 interaction domain ABE28_RS14880 PF02954 Bacterial regulatory protein, Fis family ABE28_RS14880 PF00989 PAS fold ABE28_RS14885 PF11118 Protein of unknown function (DUF2627) ABE28_RS14890 PF03009 Glycerophosphoryl diester phosphodiesterase family ABE28_RS14900 PF00072 Response regulator receiver domain ABE28_RS14900 PF08769 Sporulation initiation factor Spo0A C terminal ABE28_RS14905 PF17820 PDZ domain ABE28_RS14905 PF05580 SpoIVB peptidase S55 ABE28_RS14910 PF13476 AAA domain ABE28_RS14915 PF01316 Arginine repressor, DNA binding domain ABE28_RS14915 PF02863 Arginine repressor, C-terminal domain ABE28_RS14920 PF01479 S4 domain ABE28_RS14920 PF01728 FtsJ-like methyltransferase ABE28_RS14925 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABE28_RS14925 PF02779 Transketolase, pyrimidine binding domain ABE28_RS14925 PF02780 Transketolase, C-terminal domain ABE28_RS14930 PF00348 Polyprenyl synthetase ABE28_RS14935 PF02609 Exonuclease VII small subunit ABE28_RS14940 PF02601 Exonuclease VII, large subunit ABE28_RS14940 PF13742 OB-fold nucleic acid binding domain ABE28_RS14945 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABE28_RS14945 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABE28_RS14950 PF01029 NusB family ABE28_RS14955 PF03780 Asp23 family, cell envelope-related function ABE28_RS14960 PF02785 Biotin carboxylase C-terminal domain ABE28_RS14960 PF00289 Biotin carboxylase, N-terminal domain ABE28_RS14960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABE28_RS14965 PF00364 Biotin-requiring enzyme ABE28_RS14970 PF12685 SpoIIIAH-like protein ABE28_RS14980 PF09581 Stage III sporulation protein AF (Spore_III_AF) ABE28_RS14985 PF09546 Stage III sporulation protein AE (spore_III_AE) ABE28_RS14990 PF06686 Stage III sporulation protein AC/AD protein family ABE28_RS14995 PF06686 Stage III sporulation protein AC/AD protein family ABE28_RS15000 PF09548 Stage III sporulation protein AB (spore_III_AB) ABE28_RS15010 PF08207 Elongation factor P (EF-P) KOW-like domain ABE28_RS15010 PF09285 Elongation factor P, C-terminal ABE28_RS15010 PF01132 Elongation factor P (EF-P) OB domain ABE28_RS15015 PF01321 Creatinase/Prolidase N-terminal domain ABE28_RS15015 PF00557 Metallopeptidase family M24 ABE28_RS15020 PF01220 Dehydroquinase class II ABE28_RS15025 PF11085 Conserved membrane protein YqhR ABE28_RS15030 PF07136 Protein of unknown function (DUF1385) ABE28_RS15040 PF01734 Patatin-like phospholipase ABE28_RS15055 PF02867 Ribonucleotide reductase, barrel domain ABE28_RS15055 PF00317 Ribonucleotide reductase, all-alpha domain ABE28_RS15055 PF03477 ATP cone domain ABE28_RS15060 PF03099 Biotin/lipoate A/B protein ligase family ABE28_RS15065 PF00581 Rhodanese-like domain ABE28_RS15070 PF02347 Glycine cleavage system P-protein ABE28_RS15075 PF02347 Glycine cleavage system P-protein ABE28_RS15080 PF08669 Glycine cleavage T-protein C-terminal barrel domain ABE28_RS15080 PF01571 Aminomethyltransferase folate-binding domain ABE28_RS15085 PF00271 Helicase conserved C-terminal domain ABE28_RS15085 PF00176 SNF2 family N-terminal domain ABE28_RS15090 PF11079 Bacterial protein YqhG of unknown function ABE28_RS15120 PF07963 Prokaryotic N-terminal methylation motif ABE28_RS15125 PF00482 Type II secretion system (T2SS), protein F ABE28_RS15130 PF00437 Type II/IV secretion system protein ABE28_RS15135 PF03960 ArsC family ABE28_RS15145 PF11117 Protein of unknown function (DUF2626) ABE28_RS15155 PF00753 Metallo-beta-lactamase superfamily ABE28_RS15160 PF10958 Protein of unknown function (DUF2759) ABE28_RS15170 PF05922 Peptidase inhibitor I9 ABE28_RS15170 PF00082 Subtilase family ABE28_RS15180 PF00246 Zinc carboxypeptidase ABE28_RS15180 PF01476 LysM domain ABE28_RS15185 PF00480 ROK family ABE28_RS15200 PF01694 Rhomboid family ABE28_RS15210 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABE28_RS15230 PF01895 PhoU domain ABE28_RS15235 PF00005 ABC transporter ABE28_RS15240 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS15245 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS15250 PF12849 PBP superfamily domain ABE28_RS15255 PF03717 Penicillin-binding Protein dimerisation domain ABE28_RS15255 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS15260 PF07690 Major Facilitator Superfamily ABE28_RS15265 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABE28_RS15265 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABE28_RS15270 PF04306 Protein of unknown function (DUF456) ABE28_RS15275 PF06691 Protein of unknown function (DUF1189) ABE28_RS15285 PF04551 GcpE protein ABE28_RS15300 PF01475 Ferric uptake regulator family ABE28_RS15305 PF00950 ABC 3 transport family ABE28_RS15310 PF00005 ABC transporter ABE28_RS15320 PF01261 Xylose isomerase-like TIM barrel ABE28_RS15325 PF00270 DEAD/DEAH box helicase ABE28_RS15325 PF00271 Helicase conserved C-terminal domain ABE28_RS15340 PF02401 LytB protein ABE28_RS15345 PF01784 NIF3 (NGG1p interacting factor 3) ABE28_RS15350 PF04816 tRNA (adenine(22)-N(1))-methyltransferase ABE28_RS15355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABE28_RS15365 PF04545 Sigma-70, region 4 ABE28_RS15365 PF00140 Sigma-70 factor, region 1.2 ABE28_RS15365 PF04542 Sigma-70 region 2 ABE28_RS15365 PF04539 Sigma-70 region 3 ABE28_RS15365 PF03979 Sigma-70 factor, region 1.1 ABE28_RS15370 PF08275 DNA primase catalytic core, N-terminal domain ABE28_RS15370 PF01807 CHC2 zinc finger ABE28_RS15370 PF10410 DnaB-helicase binding domain of primase ABE28_RS15375 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABE28_RS15380 PF03618 Kinase/pyrophosphorylase ABE28_RS15385 PF08279 HTH domain ABE28_RS15385 PF00571 CBS domain ABE28_RS15390 PF02092 Glycyl-tRNA synthetase beta subunit ABE28_RS15395 PF02091 Glycyl-tRNA synthetase alpha subunit ABE28_RS15400 PF11967 Recombination protein O N terminal ABE28_RS15400 PF02565 Recombination protein O C terminal ABE28_RS15405 PF14006 YqzL-like protein ABE28_RS15410 PF07650 KH domain ABE28_RS15410 PF01926 50S ribosome-binding GTPase ABE28_RS15415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABE28_RS15420 PF01219 Prokaryotic diacylglycerol kinase ABE28_RS15425 PF02130 Uncharacterized protein family UPF0054 ABE28_RS15430 PF01966 HD domain ABE28_RS15430 PF07698 7TM receptor with intracellular HD hydrolase ABE28_RS15430 PF07697 7TM-HD extracellular ABE28_RS15435 PF02562 PhoH-like protein ABE28_RS15440 PF06898 Putative stage IV sporulation protein YqfD ABE28_RS15445 PF07873 YabP family ABE28_RS15455 PF12127 SigmaW regulon antibacterial ABE28_RS15460 PF01957 NfeD-like C-terminal, partner-binding ABE28_RS15460 PF01972 Serine dehydrogenase proteinase ABE28_RS15465 PF09424 Yqey-like protein ABE28_RS15470 PF01165 Ribosomal protein S21 ABE28_RS15475 PF02690 Na+/Pi-cotransporter ABE28_RS15485 PF01791 DeoC/LacD family aldolase ABE28_RS15490 PF01938 TRAM domain ABE28_RS15490 PF00919 Uncharacterized protein family UPF0004 ABE28_RS15490 PF04055 Radical SAM superfamily ABE28_RS15495 PF04452 RNA methyltransferase ABE28_RS15505 PF01556 DnaJ C terminal domain ABE28_RS15505 PF00684 DnaJ central domain ABE28_RS15505 PF00226 DnaJ domain ABE28_RS15510 PF00012 Hsp70 protein ABE28_RS15515 PF01025 GrpE ABE28_RS15520 PF01628 HrcA protein C terminal domain ABE28_RS15525 PF04055 Radical SAM superfamily ABE28_RS15525 PF06969 HemN C-terminal domain ABE28_RS15530 PF00009 Elongation factor Tu GTP binding domain ABE28_RS15530 PF00679 Elongation factor G C-terminus ABE28_RS15530 PF06421 GTP-binding protein LepA C-terminus ABE28_RS15530 PF03144 Elongation factor Tu domain 2 ABE28_RS15540 PF07454 Stage II sporulation protein P (SpoIIP) ABE28_RS15545 PF03418 Germination protease ABE28_RS15550 PF01649 Ribosomal protein S20 ABE28_RS15555 PF06144 DNA polymerase III, delta subunit ABE28_RS15565 PF00753 Metallo-beta-lactamase superfamily ABE28_RS15565 PF03772 Competence protein ABE28_RS15565 PF13567 Domain of unknown function (DUF4131) ABE28_RS15570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABE28_RS15575 PF10531 SLBB domain ABE28_RS15580 PF03807 NADP oxidoreductase coenzyme F420-dependent ABE28_RS15580 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABE28_RS15585 PF13649 Methyltransferase domain ABE28_RS15595 PF01966 HD domain ABE28_RS15600 PF01467 Cytidylyltransferase-like ABE28_RS15605 PF01985 CRS1 / YhbY (CRM) domain ABE28_RS15610 PF08501 Shikimate dehydrogenase substrate binding domain ABE28_RS15610 PF01488 Shikimate / quinate 5-dehydrogenase ABE28_RS15610 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABE28_RS15615 PF01926 50S ribosome-binding GTPase ABE28_RS15625 PF08970 Sporulation inhibitor A ABE28_RS15630 PF02666 Phosphatidylserine decarboxylase ABE28_RS15635 PF01066 CDP-alcohol phosphatidyltransferase ABE28_RS15650 PF04542 Sigma-70 region 2 ABE28_RS15650 PF04545 Sigma-70, region 4 ABE28_RS15665 PF01053 Cys/Met metabolism PLP-dependent enzyme ABE28_RS15670 PF00291 Pyridoxal-phosphate dependent enzyme ABE28_RS15675 PF01048 Phosphorylase superfamily ABE28_RS15680 PF08241 Methyltransferase domain ABE28_RS15685 PF10750 Protein of unknown function (DUF2536) ABE28_RS15690 PF07423 Domain of unknown function (DUF1510) ABE28_RS15695 PF03717 Penicillin-binding Protein dimerisation domain ABE28_RS15695 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS15700 PF03449 Transcription elongation factor, N-terminal ABE28_RS15700 PF01272 Transcription elongation factor, GreA/GreB, C-term ABE28_RS15705 PF00485 Phosphoribulokinase / Uridine kinase family ABE28_RS15710 PF01136 Peptidase family U32 ABE28_RS15710 PF16325 Peptidase family U32 C-terminal domain ABE28_RS15715 PF01136 Peptidase family U32 ABE28_RS15720 PF01596 O-methyltransferase ABE28_RS15725 PF02618 YceG-like family ABE28_RS15730 PF06949 Protein of unknown function (DUF1292) ABE28_RS15735 PF03652 Holliday junction resolvase ABE28_RS15740 PF06135 IreB regulatory phosphoprotein ABE28_RS15745 PF02272 DHHA1 domain ABE28_RS15745 PF01411 tRNA synthetases class II (A) ABE28_RS15745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABE28_RS15750 PF01594 AI-2E family transporter ABE28_RS15760 PF05239 PRC-barrel domain ABE28_RS15770 PF04011 LemA family ABE28_RS15775 PF14490 Helix-hairpin-helix containing domain ABE28_RS15775 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ABE28_RS15775 PF13538 UvrD-like helicase C-terminal domain ABE28_RS15790 PF00266 Aminotransferase class-V ABE28_RS15795 PF02082 Transcriptional regulator ABE28_RS15810 PF12002 MgsA AAA+ ATPase C terminal ABE28_RS15810 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABE28_RS15810 PF16193 AAA C-terminal domain ABE28_RS15825 PF00005 ABC transporter ABE28_RS15830 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS15840 PF03816 Cell envelope-related transcriptional attenuator domain ABE28_RS15855 PF02350 UDP-N-acetylglucosamine 2-epimerase ABE28_RS15875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABE28_RS15875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABE28_RS15875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABE28_RS15880 PF00483 Nucleotidyl transferase ABE28_RS15900 PF13614 AAA domain ABE28_RS15905 PF02397 Bacterial sugar transferase ABE28_RS15910 PF16363 GDP-mannose 4,6 dehydratase ABE28_RS15925 PF00535 Glycosyl transferase family 2 ABE28_RS15930 PF13477 Glycosyl transferase 4-like ABE28_RS15930 PF00534 Glycosyl transferases group 1 ABE28_RS15970 PF08548 Peptidase M10 serralysin C terminal ABE28_RS15970 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ABE28_RS15970 PF12708 Pectate lyase superfamily protein ABE28_RS16000 PF02350 UDP-N-acetylglucosamine 2-epimerase ABE28_RS16005 PF01370 NAD dependent epimerase/dehydratase family ABE28_RS16010 PF02719 Polysaccharide biosynthesis protein ABE28_RS16010 PF08485 Polysaccharide biosynthesis protein C-terminal ABE28_RS16020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABE28_RS16030 PF02397 Bacterial sugar transferase ABE28_RS16035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABE28_RS16035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABE28_RS16035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABE28_RS16040 PF02719 Polysaccharide biosynthesis protein ABE28_RS16050 PF13614 AAA domain ABE28_RS16055 PF13807 G-rich domain on putative tyrosine kinase ABE28_RS16055 PF02706 Chain length determinant protein ABE28_RS16060 PF01381 Helix-turn-helix ABE28_RS16060 PF08671 Anti-repressor SinI ABE28_RS16080 PF00082 Subtilase family ABE28_RS16085 PF00872 Transposase, Mutator family ABE28_RS16090 PF00005 ABC transporter ABE28_RS16095 PF00005 ABC transporter ABE28_RS16095 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABE28_RS16100 PF02653 Branched-chain amino acid transport system / permease component ABE28_RS16100 PF11862 Domain of unknown function (DUF3382) ABE28_RS16105 PF02653 Branched-chain amino acid transport system / permease component ABE28_RS16110 PF13458 Periplasmic binding protein ABE28_RS16115 PF13458 Periplasmic binding protein ABE28_RS16120 PF00899 ThiF family ABE28_RS16125 PF07687 Peptidase dimerisation domain ABE28_RS16125 PF01546 Peptidase family M20/M25/M40 ABE28_RS16140 PF00152 tRNA synthetases class II (D, K and N) ABE28_RS16140 PF01336 OB-fold nucleic acid binding domain ABE28_RS16140 PF02938 GAD domain ABE28_RS16145 PF03129 Anticodon binding domain ABE28_RS16145 PF13393 Histidyl-tRNA synthetase ABE28_RS16150 PF08239 Bacterial SH3 domain ABE28_RS16150 PF01520 N-acetylmuramoyl-L-alanine amidase ABE28_RS16155 PF02580 D-Tyr-tRNA(Tyr) deacylase ABE28_RS16160 PF02824 TGS domain ABE28_RS16160 PF13291 ACT domain ABE28_RS16160 PF04607 Region found in RelA / SpoT proteins ABE28_RS16165 PF00156 Phosphoribosyl transferase domain ABE28_RS16170 PF01368 DHH family ABE28_RS16170 PF17768 RecJ OB domain ABE28_RS16170 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ABE28_RS16170 PF02272 DHHA1 domain ABE28_RS16175 PF07549 SecD/SecF GG Motif ABE28_RS16175 PF02355 Protein export membrane protein ABE28_RS16185 PF01943 Polysaccharide biosynthesis protein ABE28_RS16185 PF14667 Polysaccharide biosynthesis C-terminal domain ABE28_RS16190 PF04239 Protein of unknown function (DUF421) ABE28_RS16195 PF12670 Protein of unknown function (DUF3792) ABE28_RS16200 PF02699 Preprotein translocase subunit ABE28_RS16205 PF01702 Queuine tRNA-ribosyltransferase ABE28_RS16210 PF02547 Queuosine biosynthesis protein ABE28_RS16215 PF11146 Protein of unknown function (DUF2905) ABE28_RS16220 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABE28_RS16220 PF05491 RuvB C-terminal winged helix domain ABE28_RS16220 PF17864 RuvB AAA lid domain ABE28_RS16225 PF01330 RuvA N terminal domain ABE28_RS16225 PF07499 RuvA, C-terminal domain ABE28_RS16240 PF08977 Bypass of Forespore C, N terminal ABE28_RS16240 PF08955 BofC C-terminal domain ABE28_RS16255 PF01476 LysM domain ABE28_RS16265 PF04228 Putative neutral zinc metallopeptidase ABE28_RS16270 PF02445 Quinolinate synthetase A protein ABE28_RS16275 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABE28_RS16275 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABE28_RS16280 PF00890 FAD binding domain ABE28_RS16280 PF02910 Fumarate reductase flavoprotein C-term ABE28_RS16285 PF00266 Aminotransferase class-V ABE28_RS16290 PF08279 HTH domain ABE28_RS16290 PF02829 3H domain ABE28_RS16305 PF13276 HTH-like domain ABE28_RS16305 PF00665 Integrase core domain ABE28_RS16305 PF13333 Integrase core domain ABE28_RS16310 PF00800 Prephenate dehydratase ABE28_RS16310 PF01842 ACT domain ABE28_RS16315 PF01842 ACT domain ABE28_RS16320 PF09269 Domain of unknown function (DUF1967) ABE28_RS16320 PF01018 GTP1/OBG ABE28_RS16320 PF01926 50S ribosome-binding GTPase ABE28_RS16325 PF14682 Sporulation initiation phospho-transferase B, C-terminal ABE28_RS16325 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABE28_RS16330 PF01016 Ribosomal L27 protein ABE28_RS16335 PF04327 Cysteine protease Prp ABE28_RS16340 PF00829 Ribosomal prokaryotic L21 protein ABE28_RS16345 PF10150 Ribonuclease E/G family ABE28_RS16345 PF00575 S1 RNA binding domain ABE28_RS16350 PF02163 Peptidase family M50 ABE28_RS16355 PF01551 Peptidase family M23 ABE28_RS16360 PF00575 S1 RNA binding domain ABE28_RS16365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABE28_RS16370 PF03775 Septum formation inhibitor MinC, C-terminal domain ABE28_RS16380 PF04085 rod shape-determining protein MreC ABE28_RS16390 PF04002 RadC-like JAB domain ABE28_RS16395 PF02545 Maf-like protein ABE28_RS16405 PF06750 Bacterial Peptidase A24 N-terminal domain ABE28_RS16405 PF01478 Type IV leader peptidase family ABE28_RS16410 PF08245 Mur ligase middle domain ABE28_RS16410 PF02875 Mur ligase family, glutamate ligase domain ABE28_RS16415 PF08443 RimK-like ATP-grasp domain ABE28_RS16415 PF18030 RimK PreATP-grasp domain ABE28_RS16420 PF08443 RimK-like ATP-grasp domain ABE28_RS16420 PF18030 RimK PreATP-grasp domain ABE28_RS16425 PF08264 Anticodon-binding domain of tRNA ABE28_RS16425 PF10458 Valyl tRNA synthetase tRNA binding arm ABE28_RS16425 PF00133 tRNA synthetases class I (I, L, M and V) ABE28_RS16440 PF01476 LysM domain ABE28_RS16445 PF00202 Aminotransferase class-III ABE28_RS16450 PF00490 Delta-aminolevulinic acid dehydratase ABE28_RS16460 PF03900 Porphobilinogen deaminase, C-terminal domain ABE28_RS16460 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABE28_RS16465 PF01578 Cytochrome C assembly protein ABE28_RS16470 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABE28_RS16470 PF01488 Shikimate / quinate 5-dehydrogenase ABE28_RS16470 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABE28_RS16480 PF01926 50S ribosome-binding GTPase ABE28_RS16485 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABE28_RS16485 PF05362 Lon protease (S16) C-terminal proteolytic domain ABE28_RS16485 PF00004 ATPase family associated with various cellular activities (AAA) ABE28_RS16490 PF00004 ATPase family associated with various cellular activities (AAA) ABE28_RS16490 PF05362 Lon protease (S16) C-terminal proteolytic domain ABE28_RS16500 PF10431 C-terminal, D2-small domain, of ClpB protein ABE28_RS16500 PF07724 AAA domain (Cdc48 subfamily) ABE28_RS16500 PF06689 ClpX C4-type zinc finger ABE28_RS16505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABE28_RS16505 PF05697 Bacterial trigger factor protein (TF) ABE28_RS16505 PF05698 Bacterial trigger factor protein (TF) C-terminus ABE28_RS16515 PF00694 Aconitase C-terminal domain ABE28_RS16520 PF00330 Aconitase family (aconitate hydratase) ABE28_RS16525 PF00180 Isocitrate/isopropylmalate dehydrogenase ABE28_RS16530 PF00682 HMGL-like ABE28_RS16530 PF08502 LeuA allosteric (dimerisation) domain ABE28_RS16535 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABE28_RS16535 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABE28_RS16540 PF01842 ACT domain ABE28_RS16540 PF10369 Small subunit of acetolactate synthase ABE28_RS16545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABE28_RS16545 PF00205 Thiamine pyrophosphate enzyme, central domain ABE28_RS16545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABE28_RS16605 PF00005 ABC transporter ABE28_RS16625 PF12850 Calcineurin-like phosphoesterase superfamily domain ABE28_RS16630 PF01725 Ham1 family ABE28_RS16635 PF10646 Sporulation and spore germination ABE28_RS16640 PF01177 Asp/Glu/Hydantoin racemase ABE28_RS16645 PF01047 MarR family ABE28_RS16650 PF00196 Bacterial regulatory proteins, luxR family ABE28_RS16655 PF03061 Thioesterase superfamily ABE28_RS16660 PF13085 2Fe-2S iron-sulfur cluster binding domain ABE28_RS16660 PF13183 4Fe-4S dicluster domain ABE28_RS16665 PF02910 Fumarate reductase flavoprotein C-term ABE28_RS16665 PF00890 FAD binding domain ABE28_RS16670 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABE28_RS16675 PF10702 Protein of unknown function (DUF2507) ABE28_RS16680 PF00696 Amino acid kinase family ABE28_RS16680 PF13840 ACT domain ABE28_RS16685 PF01541 GIY-YIG catalytic domain ABE28_RS16685 PF08459 UvrC Helix-hairpin-helix N-terminal ABE28_RS16685 PF02151 UvrB/uvrC motif ABE28_RS16690 PF00085 Thioredoxin ABE28_RS16695 PF01012 Electron transfer flavoprotein domain ABE28_RS16695 PF00766 Electron transfer flavoprotein FAD-binding domain ABE28_RS16700 PF01012 Electron transfer flavoprotein domain ABE28_RS16705 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS16710 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS16710 PF08359 YsiA-like protein, C-terminal region ABE28_RS16715 PF00501 AMP-binding enzyme ABE28_RS16715 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS16720 PF03994 Domain of Unknown Function (DUF350) ABE28_RS16725 PF00488 MutS domain V ABE28_RS16725 PF01713 Smr domain ABE28_RS16730 PF02811 PHP domain ABE28_RS16730 PF14716 Helix-hairpin-helix domain ABE28_RS16730 PF14791 DNA polymerase beta thumb ABE28_RS16735 PF02674 Colicin V production protein ABE28_RS16740 PF05164 Cell division protein ZapA ABE28_RS16745 PF01351 Ribonuclease HII ABE28_RS16745 PF11858 Domain of unknown function (DUF3378) ABE28_RS16750 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABE28_RS16750 PF03483 B3/4 domain ABE28_RS16750 PF03484 tRNA synthetase B5 domain ABE28_RS16750 PF01588 Putative tRNA binding domain ABE28_RS16750 PF03147 Ferredoxin-fold anticodon binding domain ABE28_RS16755 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABE28_RS16755 PF01409 tRNA synthetases class II core domain (F) ABE28_RS16760 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABE28_RS16760 PF00588 SpoU rRNA Methylase family ABE28_RS16765 PF14098 Small, acid-soluble spore protein I ABE28_RS16785 PF09557 Domain of unknown function (DUF2382) ABE28_RS16785 PF11181 Heat induced stress protein YflT ABE28_RS16790 PF02754 Cysteine-rich domain ABE28_RS16790 PF13183 4Fe-4S dicluster domain ABE28_RS16795 PF02913 FAD linked oxidases, C-terminal domain ABE28_RS16795 PF01565 FAD binding domain ABE28_RS16800 PF13556 PucR C-terminal helix-turn-helix domain ABE28_RS16800 PF17853 GGDEF-like domain ABE28_RS16800 PF05651 Putative sugar diacid recognition ABE28_RS16805 PF02652 L-lactate permease ABE28_RS16810 PF07729 FCD domain ABE28_RS16810 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS16815 PF02754 Cysteine-rich domain ABE28_RS16820 PF02589 LUD domain ABE28_RS16820 PF13183 4Fe-4S dicluster domain ABE28_RS16820 PF11870 Domain of unknown function (DUF3390) ABE28_RS16825 PF02589 LUD domain ABE28_RS16830 PF05343 M42 glutamyl aminopeptidase ABE28_RS16850 PF06961 Protein of unknown function (DUF1294) ABE28_RS16855 PF00453 Ribosomal protein L20 ABE28_RS16860 PF01632 Ribosomal protein L35 ABE28_RS16865 PF05198 Translation initiation factor IF-3, N-terminal domain ABE28_RS16865 PF00707 Translation initiation factor IF-3, C-terminal domain ABE28_RS16870 PF00583 Acetyltransferase (GNAT) family ABE28_RS16875 PF02824 TGS domain ABE28_RS16875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABE28_RS16875 PF03129 Anticodon binding domain ABE28_RS16875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABE28_RS16880 PF08812 YtxC-like family ABE28_RS16885 PF01695 IstB-like ATP binding protein ABE28_RS16885 PF07319 Primosomal protein DnaI N-terminus ABE28_RS16890 PF07261 Replication initiation and membrane attachment ABE28_RS16895 PF03477 ATP cone domain ABE28_RS16900 PF02675 S-adenosylmethionine decarboxylase ABE28_RS16905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABE28_RS16905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABE28_RS16910 PF01121 Dephospho-CoA kinase ABE28_RS16915 PF02659 Putative manganese efflux pump ABE28_RS16920 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABE28_RS16920 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABE28_RS16920 PF06827 Zinc finger found in FPG and IleRS ABE28_RS16925 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABE28_RS16925 PF01367 5'-3' exonuclease, C-terminal SAM fold ABE28_RS16925 PF00476 DNA polymerase family A ABE28_RS16930 PF01145 SPFH domain / Band 7 family ABE28_RS16935 PF12221 Bacterial membrane protein N terminal ABE28_RS16935 PF01145 SPFH domain / Band 7 family ABE28_RS16940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS16940 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS16940 PF00989 PAS fold ABE28_RS16940 PF16736 Single Cache-like ABE28_RS16945 PF00072 Response regulator receiver domain ABE28_RS16945 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS16950 PF00056 lactate/malate dehydrogenase, NAD binding domain ABE28_RS16950 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABE28_RS16955 PF00180 Isocitrate/isopropylmalate dehydrogenase ABE28_RS16960 PF00285 Citrate synthase, C-terminal domain ABE28_RS16965 PF04284 Protein of unknown function (DUF441) ABE28_RS16970 PF01594 AI-2E family transporter ABE28_RS16975 PF00463 Isocitrate lyase family ABE28_RS16980 PF01274 Malate synthase ABE28_RS16990 PF00224 Pyruvate kinase, barrel domain ABE28_RS16990 PF00391 PEP-utilising enzyme, mobile domain ABE28_RS16990 PF02887 Pyruvate kinase, alpha/beta domain ABE28_RS16995 PF00365 Phosphofructokinase ABE28_RS17000 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABE28_RS17005 PF01039 Carboxyl transferase domain ABE28_RS17005 PF17848 Acetyl-coA carboxylase zinc finger domain ABE28_RS17010 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS17010 PF07729 FCD domain ABE28_RS17015 PF00390 Malic enzyme, N-terminal domain ABE28_RS17015 PF03949 Malic enzyme, NAD binding domain ABE28_RS17020 PF14579 Helix-hairpin-helix motif ABE28_RS17020 PF02811 PHP domain ABE28_RS17020 PF01336 OB-fold nucleic acid binding domain ABE28_RS17020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABE28_RS17020 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABE28_RS17025 PF14034 Sporulation protein YtrH ABE28_RS17035 PF02272 DHHA1 domain ABE28_RS17035 PF01368 DHH family ABE28_RS17045 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS17045 PF07085 DRTGG domain ABE28_RS17045 PF00571 CBS domain ABE28_RS17045 PF03061 Thioesterase superfamily ABE28_RS17070 PF01321 Creatinase/Prolidase N-terminal domain ABE28_RS17070 PF00557 Metallopeptidase family M24 ABE28_RS17080 PF00582 Universal stress protein family ABE28_RS17085 PF14698 Argininosuccinate lyase C-terminal ABE28_RS17085 PF00206 Lyase ABE28_RS17090 PF00764 Arginosuccinate synthase ABE28_RS17100 PF00994 Probable molybdopterin binding domain ABE28_RS17105 PF12787 EcsC protein family ABE28_RS17110 PF00871 Acetokinase family ABE28_RS17115 PF02384 N-6 DNA Methylase ABE28_RS17120 PF08534 Redoxin ABE28_RS17130 PF09579 Sporulation protein YtfJ (Spore_YtfJ) ABE28_RS17140 PF06271 RDD family ABE28_RS17145 PF01343 Peptidase family S49 ABE28_RS17150 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABE28_RS17155 PF07005 Sugar-binding N-terminal domain ABE28_RS17155 PF17042 Nucleotide-binding C-terminal domain ABE28_RS17160 PF03812 2-keto-3-deoxygluconate permease ABE28_RS17165 PF00158 Sigma-54 interaction domain ABE28_RS17165 PF00072 Response regulator receiver domain ABE28_RS17165 PF02954 Bacterial regulatory protein, Fis family ABE28_RS17170 PF01513 ATP-NAD kinase ABE28_RS17180 PF00005 ABC transporter ABE28_RS17185 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS17190 PF01910 Thiamine-binding protein ABE28_RS17195 PF09084 NMT1/THI5 like ABE28_RS17205 PF00892 EamA-like transporter family ABE28_RS17210 PF07969 Amidohydrolase family ABE28_RS17215 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS17215 PF00501 AMP-binding enzyme ABE28_RS17220 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABE28_RS17225 PF02568 Thiamine biosynthesis protein (ThiI) ABE28_RS17225 PF02926 THUMP domain ABE28_RS17230 PF00266 Aminotransferase class-V ABE28_RS17240 PF06160 Septation ring formation regulator, EzrA ABE28_RS17245 PF02811 PHP domain ABE28_RS17250 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS17250 PF16295 Tetracyclin repressor-like, C-terminal domain ABE28_RS17255 PF13185 GAF domain ABE28_RS17260 PF00990 Diguanylate cyclase, GGDEF domain ABE28_RS17265 PF01479 S4 domain ABE28_RS17265 PF00163 Ribosomal protein S4/S9 N-terminal domain ABE28_RS17290 PF01479 S4 domain ABE28_RS17290 PF00579 tRNA synthetases class I (W and Y) ABE28_RS17295 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS17295 PF00912 Transglycosylase ABE28_RS17300 PF00501 AMP-binding enzyme ABE28_RS17300 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS17305 PF00583 Acetyltransferase (GNAT) family ABE28_RS17310 PF00571 CBS domain ABE28_RS17315 PF00850 Histone deacetylase domain ABE28_RS17325 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS17330 PF01817 Chorismate mutase type II ABE28_RS17330 PF00793 DAHP synthetase I family ABE28_RS17335 PF02491 SHS2 domain inserted in FTSA ABE28_RS17345 PF11009 Protein of unknown function (DUF2847) ABE28_RS17350 PF12732 YtxH-like protein ABE28_RS17355 PF06103 Bacterial protein of unknown function (DUF948) ABE28_RS17360 PF02073 Thermophilic metalloprotease (M29) ABE28_RS17365 PF02875 Mur ligase family, glutamate ligase domain ABE28_RS17365 PF08245 Mur ligase middle domain ABE28_RS17365 PF01225 Mur ligase family, catalytic domain ABE28_RS17370 PF17854 FtsK alpha domain ABE28_RS17370 PF09397 Ftsk gamma domain ABE28_RS17370 PF01580 FtsK/SpoIIIE family ABE28_RS17375 PF07687 Peptidase dimerisation domain ABE28_RS17375 PF01546 Peptidase family M20/M25/M40 ABE28_RS17380 PF07285 Protein of unknown function (DUF1444) ABE28_RS17385 PF00085 Thioredoxin ABE28_RS17395 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ ABE28_RS17400 PF06445 GyrI-like small molecule binding domain ABE28_RS17400 PF12833 Helix-turn-helix domain ABE28_RS17405 PF01931 Protein of unknown function DUF84 ABE28_RS17410 PF05343 M42 glutamyl aminopeptidase ABE28_RS17420 PF00753 Metallo-beta-lactamase superfamily ABE28_RS17425 PF02390 Putative methyltransferase ABE28_RS17430 PF14165 YtzH-like protein ABE28_RS17435 PF01636 Phosphotransferase enzyme family ABE28_RS17445 PF00781 Diacylglycerol kinase catalytic domain ABE28_RS17455 PF02834 LigT like Phosphoesterase ABE28_RS17460 PF01566 Natural resistance-associated macrophage protein ABE28_RS17470 PF01063 Amino-transferase class IV ABE28_RS17475 PF01546 Peptidase family M20/M25/M40 ABE28_RS17485 PF09335 SNARE associated Golgi protein ABE28_RS17490 PF10502 Signal peptidase, peptidase S26 ABE28_RS17510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABE28_RS17515 PF02602 Uroporphyrinogen-III synthase HemD ABE28_RS17530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABE28_RS17530 PF00056 lactate/malate dehydrogenase, NAD binding domain ABE28_RS17535 PF02652 L-lactate permease ABE28_RS17540 PF01323 DSBA-like thioredoxin domain ABE28_RS17550 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS17555 PF00171 Aldehyde dehydrogenase family ABE28_RS17565 PF03773 Predicted permease ABE28_RS17575 PF00478 IMP dehydrogenase / GMP reductase domain ABE28_RS17580 PF08274 PhnA Zinc-Ribbon ABE28_RS17580 PF03831 PhnA domain ABE28_RS17585 PF00072 Response regulator receiver domain ABE28_RS17585 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS17590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS17595 PF00005 ABC transporter ABE28_RS17610 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS17625 PF13419 Haloacid dehalogenase-like hydrolase ABE28_RS17630 PF00266 Aminotransferase class-V ABE28_RS17640 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS17645 PF00005 ABC transporter ABE28_RS17645 PF08402 TOBE domain ABE28_RS17650 PF00455 DeoR C terminal sensor domain ABE28_RS17650 PF08220 DeoR-like helix-turn-helix domain ABE28_RS17655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABE28_RS17655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABE28_RS17660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABE28_RS17660 PF02805 Metal binding domain of Ada ABE28_RS17660 PF12833 Helix-turn-helix domain ABE28_RS17660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABE28_RS17670 PF08220 DeoR-like helix-turn-helix domain ABE28_RS17675 PF00849 RNA pseudouridylate synthase ABE28_RS17675 PF01479 S4 domain ABE28_RS17680 PF01943 Polysaccharide biosynthesis protein ABE28_RS17680 PF14667 Polysaccharide biosynthesis C-terminal domain ABE28_RS17705 PF10957 Sporulation protein Cse60 ABE28_RS17715 PF00581 Rhodanese-like domain ABE28_RS17720 PF07690 Major Facilitator Superfamily ABE28_RS17725 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABE28_RS17725 PF00391 PEP-utilising enzyme, mobile domain ABE28_RS17730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABE28_RS17740 PF00248 Aldo/keto reductase family ABE28_RS17745 PF07690 Major Facilitator Superfamily ABE28_RS17750 PF01638 HxlR-like helix-turn-helix ABE28_RS17765 PF07662 Na+ dependent nucleoside transporter C-terminus ABE28_RS17765 PF01773 Na+ dependent nucleoside transporter N-terminus ABE28_RS17770 PF12146 Serine aminopeptidase, S33 ABE28_RS17790 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS17790 PF08361 MAATS-type transcriptional repressor, C-terminal region ABE28_RS17800 PF04055 Radical SAM superfamily ABE28_RS17805 PF01242 6-pyruvoyl tetrahydropterin synthase ABE28_RS17810 PF06508 Queuosine biosynthesis protein QueC ABE28_RS17815 PF02743 Cache domain ABE28_RS17815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS17815 PF00672 HAMP domain ABE28_RS17825 PF08245 Mur ligase middle domain ABE28_RS17830 PF14102 Capsule biosynthesis CapC ABE28_RS17835 PF09587 Bacterial capsule synthesis protein PGA_cap ABE28_RS17845 PF05908 Poly-gamma-glutamate hydrolase ABE28_RS17850 PF00877 NlpC/P60 family ABE28_RS17860 PF02040 Arsenical pump membrane protein ABE28_RS17865 PF00672 HAMP domain ABE28_RS17865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS17865 PF02743 Cache domain ABE28_RS17875 PF12867 DinB superfamily ABE28_RS17880 PF03845 Spore germination protein ABE28_RS17885 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS17895 PF00872 Transposase, Mutator family ABE28_RS17900 PF00583 Acetyltransferase (GNAT) family ABE28_RS17905 PF18277 AbrB C-terminal domain ABE28_RS17905 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABE28_RS17910 PF13536 Putative multidrug resistance efflux transporter ABE28_RS17915 PF00893 Small Multidrug Resistance protein ABE28_RS17920 PF00893 Small Multidrug Resistance protein ABE28_RS17930 PF04434 SWIM zinc finger ABE28_RS17930 PF00176 SNF2 family N-terminal domain ABE28_RS17930 PF00271 Helicase conserved C-terminal domain ABE28_RS17940 PF03845 Spore germination protein ABE28_RS17945 PF05504 Spore germination B3/ GerAC like, C-terminal ABE28_RS17950 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS17955 PF09335 SNARE associated Golgi protein ABE28_RS17960 PF01569 PAP2 superfamily ABE28_RS17965 PF00067 Cytochrome P450 ABE28_RS17980 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABE28_RS17980 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABE28_RS17985 PF00202 Aminotransferase class-III ABE28_RS17990 PF00171 Aldehyde dehydrogenase family ABE28_RS18000 PF00158 Sigma-54 interaction domain ABE28_RS18000 PF13426 PAS domain ABE28_RS18000 PF02954 Bacterial regulatory protein, Fis family ABE28_RS18005 PF02525 Flavodoxin-like fold ABE28_RS18010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABE28_RS18015 PF07681 DoxX ABE28_RS18025 PF01554 MatE ABE28_RS18030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABE28_RS18030 PF00005 ABC transporter ABE28_RS18035 PF00005 ABC transporter ABE28_RS18040 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS18045 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS18060 PF00005 ABC transporter ABE28_RS18065 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS18070 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABE28_RS18075 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS18075 PF17934 Tetracyclin repressor-like, C-terminal domain ABE28_RS18080 PF08125 Mannitol dehydrogenase C-terminal domain ABE28_RS18080 PF01232 Mannitol dehydrogenase Rossmann domain ABE28_RS18085 PF08279 HTH domain ABE28_RS18085 PF05043 Mga helix-turn-helix domain ABE28_RS18085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABE28_RS18085 PF00874 PRD domain ABE28_RS18085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABE28_RS18090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABE28_RS18090 PF02378 Phosphotransferase system, EIIC ABE28_RS18090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABE28_RS18095 PF03600 Citrate transporter ABE28_RS18100 PF00557 Metallopeptidase family M24 ABE28_RS18105 PF08279 HTH domain ABE28_RS18105 PF00072 Response regulator receiver domain ABE28_RS18105 PF12431 Transcriptional regulator ABE28_RS18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS18110 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABE28_RS18110 PF17203 Single cache domain 3 ABE28_RS18110 PF00989 PAS fold ABE28_RS18115 PF00730 HhH-GPD superfamily base excision DNA repair protein ABE28_RS18115 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain ABE28_RS18120 PF02805 Metal binding domain of Ada ABE28_RS18120 PF12833 Helix-turn-helix domain ABE28_RS18125 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABE28_RS18125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABE28_RS18130 PF10901 Protein of unknown function (DUF2690) ABE28_RS18135 PF10901 Protein of unknown function (DUF2690) ABE28_RS18145 PF03932 CutC family ABE28_RS18150 PF02082 Transcriptional regulator ABE28_RS18155 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS18160 PF13411 MerR HTH family regulatory protein ABE28_RS18160 PF07739 TipAS antibiotic-recognition domain ABE28_RS18165 PF00805 Pentapeptide repeats (8 copies) ABE28_RS18175 PF02522 Aminoglycoside 3-N-acetyltransferase ABE28_RS18185 PF00375 Sodium:dicarboxylate symporter family ABE28_RS18205 PF00324 Amino acid permease ABE28_RS18215 PF02683 Cytochrome C biogenesis protein transmembrane region ABE28_RS18230 PF00196 Bacterial regulatory proteins, luxR family ABE28_RS18230 PF00072 Response regulator receiver domain ABE28_RS18235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS18235 PF07730 Histidine kinase ABE28_RS18235 PF00672 HAMP domain ABE28_RS18245 PF04012 PspA/IM30 family ABE28_RS18255 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS18260 PF00266 Aminotransferase class-V ABE28_RS18265 PF00324 Amino acid permease ABE28_RS18270 PF03301 Tryptophan 2,3-dioxygenase ABE28_RS18275 PF04199 Putative cyclase ABE28_RS18285 PF01810 LysE type translocator ABE28_RS18295 PF13091 PLD-like domain ABE28_RS18310 PF00258 Flavodoxin ABE28_RS18315 PF00873 AcrB/AcrD/AcrF family ABE28_RS18330 PF00149 Calcineurin-like phosphoesterase ABE28_RS18340 PF12704 MacB-like periplasmic core domain ABE28_RS18340 PF02687 FtsX-like permease family ABE28_RS18340 PF00005 ABC transporter ABE28_RS18375 PF12746 GNAT acetyltransferase ABE28_RS18380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS18380 PF03466 LysR substrate binding domain ABE28_RS18390 PF03473 MOSC domain ABE28_RS18390 PF03475 3-alpha domain ABE28_RS18395 PF07690 Major Facilitator Superfamily ABE28_RS18400 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS18405 PF00324 Amino acid permease ABE28_RS18410 PF07690 Major Facilitator Superfamily ABE28_RS18415 PF01810 LysE type translocator ABE28_RS18420 PF02824 TGS domain ABE28_RS18420 PF03129 Anticodon binding domain ABE28_RS18420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABE28_RS18420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABE28_RS18440 PF01546 Peptidase family M20/M25/M40 ABE28_RS18440 PF07687 Peptidase dimerisation domain ABE28_RS18445 PF01144 Coenzyme A transferase ABE28_RS18450 PF01144 Coenzyme A transferase ABE28_RS18455 PF00202 Aminotransferase class-III ABE28_RS18470 PF12544 Lysine-2,3-aminomutase ABE28_RS18475 PF13302 Acetyltransferase (GNAT) domain ABE28_RS18480 PF00158 Sigma-54 interaction domain ABE28_RS18480 PF13426 PAS domain ABE28_RS18480 PF02954 Bacterial regulatory protein, Fis family ABE28_RS18490 PF13539 D-alanyl-D-alanine carboxypeptidase ABE28_RS18495 PF01144 Coenzyme A transferase ABE28_RS18500 PF01144 Coenzyme A transferase ABE28_RS18510 PF02954 Bacterial regulatory protein, Fis family ABE28_RS18510 PF00158 Sigma-54 interaction domain ABE28_RS18510 PF00989 PAS fold ABE28_RS18515 PF02803 Thiolase, C-terminal domain ABE28_RS18515 PF00108 Thiolase, N-terminal domain ABE28_RS18520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABE28_RS18520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABE28_RS18530 PF00561 alpha/beta hydrolase fold ABE28_RS18550 PF04134 Protein of unknown function, DUF393 ABE28_RS18580 PF01043 SecA preprotein cross-linking domain ABE28_RS18580 PF02810 SEC-C motif ABE28_RS18580 PF07517 SecA DEAD-like domain ABE28_RS18580 PF07516 SecA Wing and Scaffold domain ABE28_RS18605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS18605 PF03466 LysR substrate binding domain ABE28_RS18610 PF00107 Zinc-binding dehydrogenase ABE28_RS18610 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS18615 PF01048 Phosphorylase superfamily ABE28_RS18635 PF01476 LysM domain ABE28_RS18635 PF03734 L,D-transpeptidase catalytic domain ABE28_RS18660 PF00248 Aldo/keto reductase family ABE28_RS18665 PF05227 CHASE3 domain ABE28_RS18665 PF00672 HAMP domain ABE28_RS18665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS18670 PF00155 Aminotransferase class I and II ABE28_RS18670 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS18675 PF00892 EamA-like transporter family ABE28_RS18690 PF00293 NUDIX domain ABE28_RS18705 PF04740 LXG domain of WXG superfamily ABE28_RS18705 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH ABE28_RS18715 PF00083 Sugar (and other) transporter ABE28_RS18715 PF07690 Major Facilitator Superfamily ABE28_RS18720 PF02423 Ornithine cyclodeaminase/mu-crystallin family ABE28_RS18745 PF04740 LXG domain of WXG superfamily ABE28_RS18745 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH ABE28_RS18755 PF07690 Major Facilitator Superfamily ABE28_RS18755 PF00083 Sugar (and other) transporter ABE28_RS18760 PF02423 Ornithine cyclodeaminase/mu-crystallin family ABE28_RS18785 PF04740 LXG domain of WXG superfamily ABE28_RS18785 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH ABE28_RS18790 PF07690 Major Facilitator Superfamily ABE28_RS18800 PF00664 ABC transporter transmembrane region ABE28_RS18800 PF00005 ABC transporter ABE28_RS18810 PF00005 ABC transporter ABE28_RS18815 PF01032 FecCD transport family ABE28_RS18820 PF03180 NLPA lipoprotein ABE28_RS18825 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS18830 PF00005 ABC transporter ABE28_RS18830 PF09383 NIL domain ABE28_RS18835 PF00756 Putative esterase ABE28_RS18845 PF00155 Aminotransferase class I and II ABE28_RS18855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS18855 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS18860 PF17755 UvrA DNA-binding domain ABE28_RS18860 PF17760 UvrA interaction domain ABE28_RS18870 PF13538 UvrD-like helicase C-terminal domain ABE28_RS18875 PF05901 Excalibur calcium-binding domain ABE28_RS18900 PF02868 Thermolysin metallopeptidase, alpha-helical domain ABE28_RS18900 PF01447 Thermolysin metallopeptidase, catalytic domain ABE28_RS18900 PF16485 Protealysin propeptide ABE28_RS18905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABE28_RS18905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABE28_RS18905 PF01842 ACT domain ABE28_RS18920 PF08666 SAF domain ABE28_RS18920 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABE28_RS18930 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABE28_RS18930 PF08666 SAF domain ABE28_RS18935 PF03812 2-keto-3-deoxygluconate permease ABE28_RS18945 PF00701 Dihydrodipicolinate synthetase family ABE28_RS18950 PF00171 Aldehyde dehydrogenase family ABE28_RS18955 PF09339 IclR helix-turn-helix domain ABE28_RS18955 PF01614 Bacterial transcriptional regulator ABE28_RS18970 PF05593 RHS Repeat ABE28_RS18985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABE28_RS19000 PF07875 Coat F domain ABE28_RS19015 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS19040 PF00106 short chain dehydrogenase ABE28_RS19055 PF00293 NUDIX domain ABE28_RS19065 PF00258 Flavodoxin ABE28_RS19065 PF00175 Oxidoreductase NAD-binding domain ABE28_RS19065 PF00667 FAD binding domain ABE28_RS19065 PF00067 Cytochrome P450 ABE28_RS19070 PF16295 Tetracyclin repressor-like, C-terminal domain ABE28_RS19070 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS19075 PF03641 Possible lysine decarboxylase ABE28_RS19085 PF01569 PAP2 superfamily ABE28_RS19090 PF07690 Major Facilitator Superfamily ABE28_RS19110 PF01817 Chorismate mutase type II ABE28_RS19110 PF00793 DAHP synthetase I family ABE28_RS19120 PF07883 Cupin domain ABE28_RS19135 PF07690 Major Facilitator Superfamily ABE28_RS19140 PF00155 Aminotransferase class I and II ABE28_RS19155 PF01546 Peptidase family M20/M25/M40 ABE28_RS19155 PF07687 Peptidase dimerisation domain ABE28_RS19160 PF03180 NLPA lipoprotein ABE28_RS19165 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS19170 PF09383 NIL domain ABE28_RS19170 PF00005 ABC transporter ABE28_RS19180 PF01979 Amidohydrolase family ABE28_RS19185 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS19185 PF00107 Zinc-binding dehydrogenase ABE28_RS19195 PF01425 Amidase ABE28_RS19205 PF00815 Histidinol dehydrogenase ABE28_RS19225 PF03328 HpcH/HpaI aldolase/citrate lyase family ABE28_RS19230 PF12697 Alpha/beta hydrolase family ABE28_RS19240 PF00171 Aldehyde dehydrogenase family ABE28_RS19245 PF00465 Iron-containing alcohol dehydrogenase ABE28_RS19255 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS19265 PF03611 PTS system sugar-specific permease component ABE28_RS19280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABE28_RS19285 PF07690 Major Facilitator Superfamily ABE28_RS19290 PF07561 Domain of Unknown Function (DUF1540) ABE28_RS19295 PF13722 5TM C-terminal transporter carbon starvation CstA ABE28_RS19295 PF02554 Carbon starvation protein CstA ABE28_RS19300 PF00072 Response regulator receiver domain ABE28_RS19300 PF04397 LytTr DNA-binding domain ABE28_RS19305 PF07694 5TMR of 5TMR-LYT ABE28_RS19305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS19305 PF06580 Histidine kinase ABE28_RS19310 PF00488 MutS domain V ABE28_RS19310 PF01713 Smr domain ABE28_RS19320 PF07690 Major Facilitator Superfamily ABE28_RS19325 PF01546 Peptidase family M20/M25/M40 ABE28_RS19330 PF13382 Adenine deaminase C-terminal domain ABE28_RS19330 PF01979 Amidohydrolase family ABE28_RS19335 PF08402 TOBE domain ABE28_RS19335 PF00005 ABC transporter ABE28_RS19340 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS19345 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS19350 PF01156 Inosine-uridine preferring nucleoside hydrolase ABE28_RS19365 PF00367 phosphotransferase system, EIIB ABE28_RS19365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABE28_RS19365 PF02378 Phosphotransferase system, EIIC ABE28_RS19370 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ABE28_RS19375 PF00206 Lyase ABE28_RS19375 PF10415 Fumarase C C-terminus ABE28_RS19380 PF01380 SIS domain ABE28_RS19380 PF01418 Helix-turn-helix domain, rpiR family ABE28_RS19385 PF00881 Nitroreductase family ABE28_RS19405 PF00860 Permease family ABE28_RS19410 PF07969 Amidohydrolase family ABE28_RS19415 PF07969 Amidohydrolase family ABE28_RS19420 PF07969 Amidohydrolase family ABE28_RS19425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABE28_RS19430 PF01979 Amidohydrolase family ABE28_RS19435 PF01979 Amidohydrolase family ABE28_RS19440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABE28_RS19445 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS19445 PF12911 N-terminal TM domain of oligopeptide transport permease C ABE28_RS19450 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS19455 PF00005 ABC transporter ABE28_RS19455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABE28_RS19460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABE28_RS19460 PF00005 ABC transporter ABE28_RS19465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS19465 PF02743 Cache domain ABE28_RS19465 PF06580 Histidine kinase ABE28_RS19465 PF00672 HAMP domain ABE28_RS19470 PF17853 GGDEF-like domain ABE28_RS19470 PF12833 Helix-turn-helix domain ABE28_RS19480 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABE28_RS19500 PF08486 Stage II sporulation protein ABE28_RS19505 PF03845 Spore germination protein ABE28_RS19515 PF03358 NADPH-dependent FMN reductase ABE28_RS19525 PF03466 LysR substrate binding domain ABE28_RS19525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS19565 PF00561 alpha/beta hydrolase fold ABE28_RS19595 PF04542 Sigma-70 region 2 ABE28_RS19595 PF08281 Sigma-70, region 4 ABE28_RS19625 PF03466 LysR substrate binding domain ABE28_RS19625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS19635 PF00892 EamA-like transporter family ABE28_RS19640 PF00892 EamA-like transporter family ABE28_RS19645 PF14537 Cytochrome c3 ABE28_RS19645 PF00890 FAD binding domain ABE28_RS19650 PF03466 LysR substrate binding domain ABE28_RS19650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS19660 PF03600 Citrate transporter ABE28_RS19675 PF07883 Cupin domain ABE28_RS19680 PF00535 Glycosyl transferase family 2 ABE28_RS19680 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ABE28_RS19705 PF00144 Beta-lactamase ABE28_RS19710 PF07486 Cell Wall Hydrolase ABE28_RS19715 PF09671 Spore coat protein (Spore_GerQ) ABE28_RS19720 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABE28_RS19725 PF00510 Cytochrome c oxidase subunit III ABE28_RS19730 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABE28_RS19735 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ABE28_RS19765 PF00144 Beta-lactamase ABE28_RS19795 PF13474 SnoaL-like domain ABE28_RS19850 PF00107 Zinc-binding dehydrogenase ABE28_RS19850 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS19860 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS19865 PF03845 Spore germination protein ABE28_RS19870 PF13302 Acetyltransferase (GNAT) domain ABE28_RS19880 PF01037 Lrp/AsnC ligand binding domain ABE28_RS19885 PF01965 DJ-1/PfpI family ABE28_RS19890 PF07849 Protein of unknown function (DUF1641) ABE28_RS19895 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS19900 PF01380 SIS domain ABE28_RS19905 PF05746 DALR anticodon binding domain ABE28_RS19905 PF03485 Arginyl tRNA synthetase N terminal domain ABE28_RS19905 PF00750 tRNA synthetases class I (R) ABE28_RS19910 PF00196 Bacterial regulatory proteins, luxR family ABE28_RS19910 PF00072 Response regulator receiver domain ABE28_RS19915 PF00487 Fatty acid desaturase ABE28_RS19920 PF00704 Glycosyl hydrolases family 18 ABE28_RS19925 PF00892 EamA-like transporter family ABE28_RS19930 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) ABE28_RS19945 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS19970 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ABE28_RS19970 PF18416 N-acetylglucosamine binding protein domain 2 ABE28_RS19975 PF12679 ABC-2 family transporter protein ABE28_RS19980 PF00005 ABC transporter ABE28_RS19985 PF13419 Haloacid dehalogenase-like hydrolase ABE28_RS19990 PF06725 3D domain ABE28_RS19990 PF03990 G5-linked-Ubiquitin-like domain ABE28_RS19990 PF07501 G5 domain ABE28_RS20000 PF01636 Phosphotransferase enzyme family ABE28_RS20005 PF10787 Uncharacterised protein from bacillus cereus group ABE28_RS20020 PF01263 Aldose 1-epimerase ABE28_RS20025 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ABE28_RS20025 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ABE28_RS20030 PF08544 GHMP kinases C terminal ABE28_RS20030 PF00288 GHMP kinases N terminal domain ABE28_RS20030 PF10509 Galactokinase galactose-binding signature ABE28_RS20035 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ABE28_RS20035 PF00703 Glycosyl hydrolases family 2 ABE28_RS20035 PF02929 Beta galactosidase small chain ABE28_RS20035 PF16353 Domain of unknown function(DUF4981) ABE28_RS20035 PF02837 Glycosyl hydrolases family 2, sugar binding domain ABE28_RS20040 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS20045 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS20050 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS20055 PF13416 Bacterial extracellular solute-binding protein ABE28_RS20060 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ABE28_RS20060 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ABE28_RS20075 PF05525 Branched-chain amino acid transport protein ABE28_RS20090 PF03313 Serine dehydratase alpha chain ABE28_RS20095 PF01842 ACT domain ABE28_RS20095 PF03315 Serine dehydratase beta chain ABE28_RS20100 PF04235 Protein of unknown function (DUF418) ABE28_RS20105 PF04231 Endonuclease I ABE28_RS20110 PF02872 5'-nucleotidase, C-terminal domain ABE28_RS20110 PF00149 Calcineurin-like phosphoesterase ABE28_RS20120 PF00005 ABC transporter ABE28_RS20125 PF00892 EamA-like transporter family ABE28_RS20130 PF07687 Peptidase dimerisation domain ABE28_RS20130 PF01546 Peptidase family M20/M25/M40 ABE28_RS20140 PF13411 MerR HTH family regulatory protein ABE28_RS20140 PF06445 GyrI-like small molecule binding domain ABE28_RS20145 PF00583 Acetyltransferase (GNAT) family ABE28_RS20155 PF00005 ABC transporter ABE28_RS20160 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS20175 PF02386 Cation transport protein ABE28_RS20180 PF02080 TrkA-C domain ABE28_RS20180 PF02254 TrkA-N domain ABE28_RS20185 PF01740 STAS domain ABE28_RS20190 PF03551 Transcriptional regulator PadR-like family ABE28_RS20200 PF16363 GDP-mannose 4,6 dehydratase ABE28_RS20205 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABE28_RS20205 PF00535 Glycosyl transferase family 2 ABE28_RS20210 PF00483 Nucleotidyl transferase ABE28_RS20215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABE28_RS20215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABE28_RS20215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABE28_RS20215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABE28_RS20220 PF13460 NAD(P)H-binding ABE28_RS20225 PF02600 Disulfide bond formation protein DsbB ABE28_RS20230 PF13462 Thioredoxin ABE28_RS20235 PF02082 Transcriptional regulator ABE28_RS20240 PF05036 Sporulation related domain ABE28_RS20240 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABE28_RS20240 PF08239 Bacterial SH3 domain ABE28_RS20255 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ABE28_RS20260 PF01022 Bacterial regulatory protein, arsR family ABE28_RS20270 PF02082 Transcriptional regulator ABE28_RS20275 PF00085 Thioredoxin ABE28_RS20285 PF01270 Glycosyl hydrolases family 8 ABE28_RS20290 PF01596 O-methyltransferase ABE28_RS20330 PF01047 MarR family ABE28_RS20335 PF07690 Major Facilitator Superfamily ABE28_RS20350 PF00005 ABC transporter ABE28_RS20360 PF01370 NAD dependent epimerase/dehydratase family ABE28_RS20370 PF04229 GrpB protein ABE28_RS20370 PF13673 Acetyltransferase (GNAT) domain ABE28_RS20375 PF01425 Amidase ABE28_RS20380 PF04229 GrpB protein ABE28_RS20400 PF01872 RibD C-terminal domain ABE28_RS20410 PF12728 Helix-turn-helix domain ABE28_RS20410 PF12727 PBP superfamily domain ABE28_RS20415 PF06968 Biotin and Thiamin Synthesis associated domain ABE28_RS20415 PF04055 Radical SAM superfamily ABE28_RS20420 PF00155 Aminotransferase class I and II ABE28_RS20425 PF02632 BioY family ABE28_RS20435 PF00202 Aminotransferase class-III ABE28_RS20445 PF00675 Insulinase (Peptidase family M16) ABE28_RS20470 PF13537 Glutamine amidotransferase domain ABE28_RS20470 PF00733 Asparagine synthase ABE28_RS20485 PF00854 POT family ABE28_RS20495 PF11738 Protein of unknown function (DUF3298) ABE28_RS20495 PF13739 Deacetylase PdaC ABE28_RS20500 PF04542 Sigma-70 region 2 ABE28_RS20500 PF08281 Sigma-70, region 4 ABE28_RS20505 PF01522 Polysaccharide deacetylase ABE28_RS20505 PF11738 Protein of unknown function (DUF3298) ABE28_RS20505 PF13739 Deacetylase PdaC ABE28_RS20510 PF01709 Transcriptional regulator ABE28_RS20530 PF00092 von Willebrand factor type A domain ABE28_RS20535 PF07728 AAA domain (dynein-related subfamily) ABE28_RS20540 PF13460 NAD(P)H-binding ABE28_RS20555 PF05726 Pirin C-terminal cupin domain ABE28_RS20555 PF02678 Pirin ABE28_RS20570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS20570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABE28_RS20575 PF01493 GXGXG motif ABE28_RS20575 PF00310 Glutamine amidotransferases class-II ABE28_RS20575 PF04898 Glutamate synthase central domain ABE28_RS20575 PF01645 Conserved region in glutamate synthase ABE28_RS20580 PF03466 LysR substrate binding domain ABE28_RS20580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS20610 PF17936 Bacterial Ig domain ABE28_RS20610 PF00082 Subtilase family ABE28_RS20615 PF00133 tRNA synthetases class I (I, L, M and V) ABE28_RS20615 PF08264 Anticodon-binding domain of tRNA ABE28_RS20615 PF09334 tRNA synthetases class I (M) ABE28_RS20615 PF13603 Leucyl-tRNA synthetase, Domain 2 ABE28_RS20620 PF10732 Protein of unknown function (DUF2524) ABE28_RS20625 PF09346 SMI1 / KNR4 family (SUKH-1) ABE28_RS20630 PF04055 Radical SAM superfamily ABE28_RS20630 PF16199 Radical_SAM C-terminal domain ABE28_RS20635 PF06962 Putative rRNA methylase ABE28_RS20645 PF12146 Serine aminopeptidase, S33 ABE28_RS20650 PF00132 Bacterial transferase hexapeptide (six repeats) ABE28_RS20655 PF02772 S-adenosylmethionine synthetase, central domain ABE28_RS20655 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABE28_RS20655 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABE28_RS20660 PF01293 Phosphoenolpyruvate carboxykinase ABE28_RS20665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABE28_RS20665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABE28_RS20665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABE28_RS20680 PF02350 UDP-N-acetylglucosamine 2-epimerase ABE28_RS20685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS20685 PF05227 CHASE3 domain ABE28_RS20685 PF00672 HAMP domain ABE28_RS20700 PF10763 Protein of unknown function (DUF2584) ABE28_RS20705 PF00326 Prolyl oligopeptidase family ABE28_RS20715 PF00534 Glycosyl transferases group 1 ABE28_RS20715 PF09318 Glycosyl transferase 1 domain A ABE28_RS20720 PF00239 Resolvase, N terminal domain ABE28_RS20720 PF02796 Helix-turn-helix domain of resolvase ABE28_RS20730 PF00005 ABC transporter ABE28_RS20735 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS20740 PF00293 NUDIX domain ABE28_RS20755 PF00210 Ferritin-like domain ABE28_RS20760 PF02664 S-Ribosylhomocysteinase (LuxS) ABE28_RS20765 PF01809 Putative membrane protein insertion efficiency factor ABE28_RS20770 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment ABE28_RS20770 PF01297 Zinc-uptake complex component A periplasmic ABE28_RS20775 PF03480 Bacterial extracellular solute-binding protein, family 7 ABE28_RS20780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS20780 PF17203 Single cache domain 3 ABE28_RS20780 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABE28_RS20785 PF00072 Response regulator receiver domain ABE28_RS20785 PF04703 FaeA-like protein ABE28_RS20790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABE28_RS20790 PF13378 Enolase C-terminal domain-like ABE28_RS20795 PF00501 AMP-binding enzyme ABE28_RS20795 PF13193 AMP-binding enzyme C-terminal domain ABE28_RS20800 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS20805 PF00561 alpha/beta hydrolase fold ABE28_RS20810 PF16582 Middle domain of thiamine pyrophosphate ABE28_RS20810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABE28_RS20810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABE28_RS20815 PF00425 chorismate binding enzyme ABE28_RS20820 PF01040 UbiA prenyltransferase family ABE28_RS20825 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABE28_RS20965 PF02308 MgtC family ABE28_RS20975 PF00155 Aminotransferase class I and II ABE28_RS20990 PF01619 Proline dehydrogenase ABE28_RS20995 PF00171 Aldehyde dehydrogenase family ABE28_RS21005 PF13556 PucR C-terminal helix-turn-helix domain ABE28_RS21005 PF17853 GGDEF-like domain ABE28_RS21010 PF00753 Metallo-beta-lactamase superfamily ABE28_RS21015 PF01266 FAD dependent oxidoreductase ABE28_RS21015 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABE28_RS21020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABE28_RS21020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABE28_RS21025 PF00230 Major intrinsic protein ABE28_RS21030 PF04309 Glycerol-3-phosphate responsive antiterminator ABE28_RS21040 PF01717 Cobalamin-independent synthase, Catalytic domain ABE28_RS21060 PF02515 CoA-transferase family III ABE28_RS21065 PF00324 Amino acid permease ABE28_RS21070 PF07504 Fungalysin/Thermolysin Propeptide Motif ABE28_RS21070 PF01447 Thermolysin metallopeptidase, catalytic domain ABE28_RS21070 PF03413 Peptidase propeptide and YPEB domain ABE28_RS21070 PF02868 Thermolysin metallopeptidase, alpha-helical domain ABE28_RS21090 PF00933 Glycosyl hydrolase family 3 N terminal domain ABE28_RS21090 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABE28_RS21100 PF01978 Sugar-specific transcriptional regulator TrmB ABE28_RS21100 PF11495 Archaeal transcriptional regulator TrmB ABE28_RS21105 PF01925 Sulfite exporter TauE/SafE ABE28_RS21115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABE28_RS21120 PF00107 Zinc-binding dehydrogenase ABE28_RS21120 PF08240 Alcohol dehydrogenase GroES-like domain ABE28_RS21125 PF07486 Cell Wall Hydrolase ABE28_RS21130 PF06949 Protein of unknown function (DUF1292) ABE28_RS21135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABE28_RS21140 PF00253 Ribosomal protein S14p/S29e ABE28_RS21145 PF00471 Ribosomal protein L33 ABE28_RS21150 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABE28_RS21150 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABE28_RS21155 PF01541 GIY-YIG catalytic domain ABE28_RS21160 PF11611 Domain of unknown function (DUF4352) ABE28_RS21160 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ABE28_RS21165 PF00245 Alkaline phosphatase ABE28_RS21170 PF02222 ATP-grasp domain ABE28_RS21180 PF01476 LysM domain ABE28_RS21180 PF00246 Zinc carboxypeptidase ABE28_RS21185 PF00199 Catalase ABE28_RS21185 PF06628 Catalase-related immune-responsive ABE28_RS21195 PF00440 Bacterial regulatory proteins, tetR family ABE28_RS21200 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ABE28_RS21205 PF04231 Endonuclease I ABE28_RS21210 PF00324 Amino acid permease ABE28_RS21220 PF02872 5'-nucleotidase, C-terminal domain ABE28_RS21220 PF00149 Calcineurin-like phosphoesterase ABE28_RS21225 PF05163 DinB family ABE28_RS21235 PF04545 Sigma-70, region 4 ABE28_RS21245 PF01804 Penicillin amidase ABE28_RS21250 PF00872 Transposase, Mutator family ABE28_RS21270 PF07690 Major Facilitator Superfamily ABE28_RS21275 PF13520 Amino acid permease ABE28_RS21280 PF02673 Bacitracin resistance protein BacA ABE28_RS21285 PF03009 Glycerophosphoryl diester phosphodiesterase family ABE28_RS21290 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABE28_RS21295 PF01476 LysM domain ABE28_RS21295 PF00704 Glycosyl hydrolases family 18 ABE28_RS21300 PF07885 Ion channel ABE28_RS21300 PF02254 TrkA-N domain ABE28_RS21305 PF08868 YugN-like family ABE28_RS21315 PF00342 Phosphoglucose isomerase ABE28_RS21320 PF00465 Iron-containing alcohol dehydrogenase ABE28_RS21325 PF04070 Domain of unknown function (DUF378) ABE28_RS21330 PF00575 S1 RNA binding domain ABE28_RS21340 PF00155 Aminotransferase class I and II ABE28_RS21345 PF01037 Lrp/AsnC ligand binding domain ABE28_RS21350 PF08386 TAP-like protein ABE28_RS21350 PF00561 alpha/beta hydrolase fold ABE28_RS21360 PF00155 Aminotransferase class I and II ABE28_RS21370 PF01497 Periplasmic binding protein ABE28_RS21375 PF01032 FecCD transport family ABE28_RS21380 PF00005 ABC transporter ABE28_RS21385 PF10615 Protein of unknown function (DUF2470) ABE28_RS21385 PF01243 Pyridoxamine 5'-phosphate oxidase ABE28_RS21400 PF00005 ABC transporter ABE28_RS21410 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABE28_RS21420 PF11724 YvbH-like oligomerisation region ABE28_RS21420 PF08000 Bacterial PH domain ABE28_RS21425 PF00583 Acetyltransferase (GNAT) family ABE28_RS21435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABE28_RS21440 PF08810 Kinase associated protein B ABE28_RS21445 PF00929 Exonuclease ABE28_RS21450 PF00912 Transglycosylase ABE28_RS21450 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS21460 PF17328 Family of unknown function (DUF5366) ABE28_RS21465 PF13244 Domain of unknown function (DUF4040) ABE28_RS21465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABE28_RS21465 PF00361 Proton-conducting membrane transporter ABE28_RS21470 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABE28_RS21475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABE28_RS21480 PF00361 Proton-conducting membrane transporter ABE28_RS21485 PF01899 Na+/H+ ion antiporter subunit ABE28_RS21490 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABE28_RS21495 PF03334 Na+/H+ antiporter subunit ABE28_RS21505 PF03061 Thioesterase superfamily ABE28_RS21510 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) ABE28_RS21515 PF01494 FAD binding domain ABE28_RS21520 PF01872 RibD C-terminal domain ABE28_RS21520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABE28_RS21525 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABE28_RS21525 PF00925 GTP cyclohydrolase II ABE28_RS21535 PF00883 Cytosol aminopeptidase family, catalytic domain ABE28_RS21535 PF02789 Cytosol aminopeptidase family, N-terminal domain ABE28_RS21540 PF02681 Divergent PAP2 family ABE28_RS21550 PF06725 3D domain ABE28_RS21555 PF14068 Putative membrane protein ABE28_RS21560 PF13344 Haloacid dehalogenase-like hydrolase ABE28_RS21560 PF00293 NUDIX domain ABE28_RS21565 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS21570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS21580 PF01521 Iron-sulphur cluster biosynthesis ABE28_RS21590 PF07293 Protein of unknown function (DUF1450) ABE28_RS21595 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS21600 PF07315 Protein of unknown function (DUF1462) ABE28_RS21605 PF01106 NifU-like domain ABE28_RS21610 PF00288 GHMP kinases N terminal domain ABE28_RS21610 PF08544 GHMP kinases C terminal ABE28_RS21615 PF00291 Pyridoxal-phosphate dependent enzyme ABE28_RS21620 PF00742 Homoserine dehydrogenase ABE28_RS21620 PF03447 Homoserine dehydrogenase, NAD binding domain ABE28_RS21620 PF01842 ACT domain ABE28_RS21635 PF04608 Phosphatidylglycerophosphatase A ABE28_RS21640 PF00665 Integrase core domain ABE28_RS21640 PF13276 HTH-like domain ABE28_RS21640 PF13333 Integrase core domain ABE28_RS21650 PF13344 Haloacid dehalogenase-like hydrolase ABE28_RS21655 PF01934 Protein of unknown function DUF86 ABE28_RS21670 PF06265 Protein of unknown function (DUF1027) ABE28_RS21675 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) ABE28_RS21680 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ABE28_RS21680 PF04055 Radical SAM superfamily ABE28_RS21685 PF01551 Peptidase family M23 ABE28_RS21690 PF09560 Sporulation protein YunB (Spo_YunB) ABE28_RS21695 PF11871 Domain of unknown function (DUF3391) ABE28_RS21695 PF01966 HD domain ABE28_RS21700 PF08827 Domain of unknown function (DUF1805) ABE28_RS21705 PF02872 5'-nucleotidase, C-terminal domain ABE28_RS21710 PF01925 Sulfite exporter TauE/SafE ABE28_RS21715 PF01904 Protein of unknown function DUF72 ABE28_RS21725 PF01458 Uncharacterized protein family (UPF0051) ABE28_RS21730 PF01592 NifU-like N terminal domain ABE28_RS21735 PF00266 Aminotransferase class-V ABE28_RS21740 PF01458 Uncharacterized protein family (UPF0051) ABE28_RS21745 PF00005 ABC transporter ABE28_RS21760 PF13333 Integrase core domain ABE28_RS21760 PF00665 Integrase core domain ABE28_RS21760 PF13276 HTH-like domain ABE28_RS21765 PF03180 NLPA lipoprotein ABE28_RS21770 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS21775 PF00005 ABC transporter ABE28_RS21775 PF09383 NIL domain ABE28_RS21780 PF01053 Cys/Met metabolism PLP-dependent enzyme ABE28_RS21785 PF00085 Thioredoxin ABE28_RS21790 PF01751 Toprim domain ABE28_RS21795 PF01597 Glycine cleavage H-protein ABE28_RS21800 PF03960 ArsC family ABE28_RS21805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS21805 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS21805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS21810 PF00108 Thiolase, N-terminal domain ABE28_RS21810 PF02803 Thiolase, C-terminal domain ABE28_RS21815 PF00378 Enoyl-CoA hydratase/isomerase ABE28_RS21815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABE28_RS21815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABE28_RS21820 PF14115 YuzL-like protein ABE28_RS21825 PF01619 Proline dehydrogenase ABE28_RS21835 PF07875 Coat F domain ABE28_RS21845 PF01098 Cell cycle protein ABE28_RS21850 PF00950 ABC 3 transport family ABE28_RS21855 PF00950 ABC 3 transport family ABE28_RS21860 PF00005 ABC transporter ABE28_RS21865 PF01297 Zinc-uptake complex component A periplasmic ABE28_RS21870 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS21870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ABE28_RS21875 PF00324 Amino acid permease ABE28_RS21880 PF00128 Alpha amylase, catalytic domain ABE28_RS21885 PF05504 Spore germination B3/ GerAC like, C-terminal ABE28_RS21890 PF03845 Spore germination protein ABE28_RS21895 PF03323 Bacillus/Clostridium GerA spore germination protein ABE28_RS21925 PF03737 Aldolase/RraA ABE28_RS21930 PF00884 Sulfatase ABE28_RS21935 PF01497 Periplasmic binding protein ABE28_RS21940 PF00005 ABC transporter ABE28_RS21945 PF01032 FecCD transport family ABE28_RS21950 PF01032 FecCD transport family ABE28_RS21965 PF13249 Squalene-hopene cyclase N-terminal domain ABE28_RS21965 PF13243 Squalene-hopene cyclase C-terminal domain ABE28_RS21990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS21990 PF00672 HAMP domain ABE28_RS21990 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS21995 PF00072 Response regulator receiver domain ABE28_RS21995 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS22000 PF01625 Peptide methionine sulfoxide reductase ABE28_RS22005 PF00072 Response regulator receiver domain ABE28_RS22005 PF00196 Bacterial regulatory proteins, luxR family ABE28_RS22010 PF07730 Histidine kinase ABE28_RS22020 PF03466 LysR substrate binding domain ABE28_RS22020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABE28_RS22025 PF10057 Uncharacterized conserved protein (DUF2294) ABE28_RS22030 PF00384 Molybdopterin oxidoreductase ABE28_RS22030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABE28_RS22030 PF00037 4Fe-4S binding domain ABE28_RS22030 PF01568 Molydopterin dinucleotide binding domain ABE28_RS22030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABE28_RS22035 PF07849 Protein of unknown function (DUF1641) ABE28_RS22045 PF00890 FAD binding domain ABE28_RS22050 PF01061 ABC-2 type transporter ABE28_RS22055 PF13732 Domain of unknown function (DUF4162) ABE28_RS22055 PF00005 ABC transporter ABE28_RS22075 PF01668 SmpB protein ABE28_RS22080 PF00575 S1 RNA binding domain ABE28_RS22080 PF17876 Cold shock domain ABE28_RS22080 PF00773 RNB domain ABE28_RS22080 PF08206 Ribonuclease B OB domain ABE28_RS22085 PF12146 Serine aminopeptidase, S33 ABE28_RS22090 PF03840 Preprotein translocase SecG subunit ABE28_RS22100 PF02557 D-alanyl-D-alanine carboxypeptidase ABE28_RS22125 PF03952 Enolase, N-terminal domain ABE28_RS22125 PF00113 Enolase, C-terminal TIM barrel domain ABE28_RS22130 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABE28_RS22130 PF01676 Metalloenzyme superfamily ABE28_RS22135 PF00121 Triosephosphate isomerase ABE28_RS22140 PF00162 Phosphoglycerate kinase ABE28_RS22145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABE28_RS22145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABE28_RS22150 PF04198 Putative sugar-binding domain ABE28_RS22160 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABE28_RS22160 PF04552 Sigma-54, DNA binding domain ABE28_RS22160 PF04963 Sigma-54 factor, core binding domain ABE28_RS22170 PF00574 Clp protease ABE28_RS22175 PF00381 PTS HPr component phosphorylation site ABE28_RS22180 PF10298 WhiA N-terminal LAGLIDADG-like domain ABE28_RS22180 PF14527 WhiA LAGLIDADG-like domain ABE28_RS22180 PF02650 WhiA C-terminal HTH domain ABE28_RS22185 PF01933 Uncharacterised protein family UPF0052 ABE28_RS22190 PF03668 P-loop ATPase protein family ABE28_RS22195 PF00293 NUDIX domain ABE28_RS22200 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABE28_RS22210 PF00171 Aldehyde dehydrogenase family ABE28_RS22215 PF01502 Phosphoribosyl-AMP cyclohydrolase ABE28_RS22215 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ABE28_RS22220 PF00977 Histidine biosynthesis protein ABE28_RS22225 PF00977 Histidine biosynthesis protein ABE28_RS22230 PF00117 Glutamine amidotransferase class-I ABE28_RS22235 PF00475 Imidazoleglycerol-phosphate dehydratase ABE28_RS22240 PF00815 Histidinol dehydrogenase ABE28_RS22245 PF01634 ATP phosphoribosyltransferase ABE28_RS22250 PF13393 Histidyl-tRNA synthetase ABE28_RS22260 PF04203 Sortase domain ABE28_RS22265 PF14602 Hexapeptide repeat of succinyl-transferase ABE28_RS22270 PF13419 Haloacid dehalogenase-like hydrolase ABE28_RS22275 PF07670 Nucleoside recognition ABE28_RS22280 PF01790 Prolipoprotein diacylglyceryl transferase ABE28_RS22285 PF02603 HPr Serine kinase N terminus ABE28_RS22285 PF07475 HPr Serine kinase C-terminal domain ABE28_RS22290 PF08818 Domain of unknown function (DU1801) ABE28_RS22295 PF13349 Putative adhesin ABE28_RS22300 PF00005 ABC transporter ABE28_RS22300 PF17755 UvrA DNA-binding domain ABE28_RS22300 PF17760 UvrA interaction domain ABE28_RS22305 PF12344 Ultra-violet resistance protein B ABE28_RS22305 PF17757 UvrB interaction domain ABE28_RS22305 PF00271 Helicase conserved C-terminal domain ABE28_RS22305 PF04851 Type III restriction enzyme, res subunit ABE28_RS22305 PF02151 UvrB/uvrC motif ABE28_RS22310 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) ABE28_RS22315 PF00199 Catalase ABE28_RS22315 PF06628 Catalase-related immune-responsive ABE28_RS22320 PF03176 MMPL family ABE28_RS22325 PF04264 YceI-like domain ABE28_RS22330 PF01032 FecCD transport family ABE28_RS22335 PF01032 FecCD transport family ABE28_RS22340 PF01497 Periplasmic binding protein ABE28_RS22345 PF17820 PDZ domain ABE28_RS22350 PF17820 PDZ domain ABE28_RS22350 PF03572 Peptidase family S41 ABE28_RS22350 PF01471 Putative peptidoglycan binding domain ABE28_RS22355 PF00877 NlpC/P60 family ABE28_RS22360 PF02687 FtsX-like permease family ABE28_RS22360 PF18075 FtsX extracellular domain ABE28_RS22365 PF00005 ABC transporter ABE28_RS22375 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABE28_RS22375 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABE28_RS22380 PF03462 PCRF domain ABE28_RS22380 PF00472 RF-1 domain ABE28_RS22385 PF02810 SEC-C motif ABE28_RS22385 PF07516 SecA Wing and Scaffold domain ABE28_RS22385 PF01043 SecA preprotein cross-linking domain ABE28_RS22385 PF07517 SecA DEAD-like domain ABE28_RS22390 PF01381 Helix-turn-helix ABE28_RS22390 PF08671 Anti-repressor SinI ABE28_RS22400 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABE28_RS22400 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ABE28_RS22410 PF02561 Flagellar protein FliS ABE28_RS22415 PF02465 Flagellar hook-associated protein 2 N-terminus ABE28_RS22415 PF07195 Flagellar hook-associated protein 2 C-terminus ABE28_RS22415 PF07196 Flagellin hook IN motif ABE28_RS22420 PF03646 FlaG protein ABE28_RS22430 PF00700 Bacterial flagellin C-terminal helical region ABE28_RS22430 PF00669 Bacterial flagellin N-terminal helical region ABE28_RS22435 PF02599 Global regulator protein family ABE28_RS22440 PF02623 FliW protein ABE28_RS22450 PF00669 Bacterial flagellin N-terminal helical region ABE28_RS22450 PF00700 Bacterial flagellin C-terminal helical region ABE28_RS22455 PF00460 Flagella basal body rod protein ABE28_RS22455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABE28_RS22465 PF04316 Anti-sigma-28 factor, FlgM ABE28_RS22475 PF00156 Phosphoribosyl transferase domain ABE28_RS22485 PF02645 Uncharacterised protein, DegV family COG1307 ABE28_RS22490 PF00072 Response regulator receiver domain ABE28_RS22490 PF00196 Bacterial regulatory proteins, luxR family ABE28_RS22495 PF05384 Sensor protein DegS ABE28_RS22495 PF07730 Histidine kinase ABE28_RS22495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS22500 PF09186 Domain of unknown function (DUF1949) ABE28_RS22500 PF01205 Uncharacterized protein family UPF0029 ABE28_RS22505 PF03816 Cell envelope-related transcriptional attenuator domain ABE28_RS22510 PF00953 Glycosyl transferase family 4 ABE28_RS22515 PF00534 Glycosyl transferases group 1 ABE28_RS22515 PF13439 Glycosyltransferase Family 4 ABE28_RS22520 PF03808 Glycosyl transferase WecB/TagA/CpsF family ABE28_RS22530 PF03023 Lipid II flippase MurJ ABE28_RS22535 PF13579 Glycosyl transferase 4-like domain ABE28_RS22535 PF00534 Glycosyl transferases group 1 ABE28_RS22540 PF08239 Bacterial SH3 domain ABE28_RS22540 PF00005 ABC transporter ABE28_RS22545 PF01061 ABC-2 type transporter ABE28_RS22550 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABE28_RS22555 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABE28_RS22560 PF01467 Cytidylyltransferase-like ABE28_RS22565 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABE28_RS22570 PF00877 NlpC/P60 family ABE28_RS22570 PF01476 LysM domain ABE28_RS22575 PF03816 Cell envelope-related transcriptional attenuator domain ABE28_RS22580 PF00884 Sulfatase ABE28_RS22590 PF07517 SecA DEAD-like domain ABE28_RS22590 PF01043 SecA preprotein cross-linking domain ABE28_RS22590 PF07516 SecA Wing and Scaffold domain ABE28_RS22600 PF00245 Alkaline phosphatase ABE28_RS22605 PF08486 Stage II sporulation protein ABE28_RS22605 PF04122 Putative cell wall binding repeat 2 ABE28_RS22610 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS22610 PF03717 Penicillin-binding Protein dimerisation domain ABE28_RS22610 PF05223 NTF2-like N-terminal transpeptidase domain ABE28_RS22630 PF04434 SWIM zinc finger ABE28_RS22635 PF12419 SNF2 Helicase protein ABE28_RS22635 PF00271 Helicase conserved C-terminal domain ABE28_RS22635 PF00176 SNF2 family N-terminal domain ABE28_RS22640 PF01810 LysE type translocator ABE28_RS22645 PF00392 Bacterial regulatory proteins, gntR family ABE28_RS22645 PF00155 Aminotransferase class I and II ABE28_RS22660 PF00082 Subtilase family ABE28_RS22660 PF00746 LPXTG cell wall anchor motif ABE28_RS22660 PF02225 PA domain ABE28_RS22660 PF06280 Fn3-like domain ABE28_RS22665 PF12911 N-terminal TM domain of oligopeptide transport permease C ABE28_RS22665 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS22670 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS22675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABE28_RS22680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABE28_RS22680 PF00005 ABC transporter ABE28_RS22685 PF00005 ABC transporter ABE28_RS22685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABE28_RS22695 PF00436 Single-strand binding protein family ABE28_RS22710 PF07977 FabA-like domain ABE28_RS22720 PF00460 Flagella basal body rod protein ABE28_RS22720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABE28_RS22725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABE28_RS22725 PF00460 Flagella basal body rod protein ABE28_RS22735 PF12116 Stage III sporulation protein D ABE28_RS22740 PF01551 Peptidase family M23 ABE28_RS22750 PF08486 Stage II sporulation protein ABE28_RS22755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABE28_RS22765 PF06612 Protein of unknown function (DUF1146) ABE28_RS22770 PF00361 Proton-conducting membrane transporter ABE28_RS22775 PF00361 Proton-conducting membrane transporter ABE28_RS22780 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus ABE28_RS22780 PF00361 Proton-conducting membrane transporter ABE28_RS22780 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABE28_RS22785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABE28_RS22790 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABE28_RS22795 PF00037 4Fe-4S binding domain ABE28_RS22800 PF00146 NADH dehydrogenase ABE28_RS22805 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABE28_RS22810 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABE28_RS22815 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABE28_RS22820 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABE28_RS22825 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABE28_RS22825 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ABE28_RS22830 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABE28_RS22830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABE28_RS22835 PF00231 ATP synthase ABE28_RS22840 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABE28_RS22840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABE28_RS22840 PF00306 ATP synthase alpha/beta chain, C terminal domain ABE28_RS22845 PF00213 ATP synthase delta (OSCP) subunit ABE28_RS22850 PF00430 ATP synthase B/B' CF(0) ABE28_RS22855 PF00137 ATP synthase subunit C ABE28_RS22860 PF00119 ATP synthase A chain ABE28_RS22865 PF03899 ATP synthase I chain ABE28_RS22870 PF00082 Subtilase family ABE28_RS22870 PF02225 PA domain ABE28_RS22870 PF13860 FlgD Ig-like domain ABE28_RS22870 PF05922 Peptidase inhibitor I9 ABE28_RS22875 PF02350 UDP-N-acetylglucosamine 2-epimerase ABE28_RS22885 PF00464 Serine hydroxymethyltransferase ABE28_RS22890 PF04260 Protein of unknown function (DUF436) ABE28_RS22895 PF02502 Ribose/Galactose Isomerase ABE28_RS22900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_RS22900 PF00672 HAMP domain ABE28_RS22900 PF02743 Cache domain ABE28_RS22905 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABE28_RS22910 PF02659 Putative manganese efflux pump ABE28_RS22915 PF01300 Telomere recombination ABE28_RS22915 PF03481 Putative GTP-binding controlling metal-binding ABE28_RS22920 PF09551 Stage II sporulation protein R (spore_II_R) ABE28_RS22925 PF17827 PrmC N-terminal domain ABE28_RS22925 PF13847 Methyltransferase domain ABE28_RS22930 PF03462 PCRF domain ABE28_RS22930 PF00472 RF-1 domain ABE28_RS22940 PF00265 Thymidine kinase ABE28_RS22950 PF07497 Rho termination factor, RNA-binding domain ABE28_RS22950 PF07498 Rho termination factor, N-terminal domain ABE28_RS22950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABE28_RS22955 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ABE28_RS22960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABE28_RS22965 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABE28_RS22970 PF01116 Fructose-bisphosphate aldolase class-II ABE28_RS22975 PF00072 Response regulator receiver domain ABE28_RS22980 PF10740 Domain of unknown function (DUF2529) ABE28_RS22985 PF06418 CTP synthase N-terminus ABE28_RS22985 PF00117 Glutamine amidotransferase class-I ABE28_RS22990 PF05066 HB1, ASXL, restriction endonuclease HTH domain ABE28_RS22995 PF02310 B12 binding domain ABE28_RS22995 PF01642 Methylmalonyl-CoA mutase ABE28_RS23005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS23005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS23005 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS23010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABE28_RS23010 PF02770 Acyl-CoA dehydrogenase, middle domain ABE28_RS23010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABE28_RS23015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABE28_RS23015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABE28_RS23020 PF00108 Thiolase, N-terminal domain ABE28_RS23020 PF02803 Thiolase, C-terminal domain ABE28_RS23025 PF13183 4Fe-4S dicluster domain ABE28_RS23025 PF02754 Cysteine-rich domain ABE28_RS23030 PF13091 PLD-like domain ABE28_RS23035 PF03851 UV-endonuclease UvdE ABE28_RS23040 PF03485 Arginyl tRNA synthetase N terminal domain ABE28_RS23040 PF05746 DALR anticodon binding domain ABE28_RS23040 PF00750 tRNA synthetases class I (R) ABE28_RS23045 PF09148 Domain of unknown function (DUF1934) ABE28_RS23050 PF00491 Arginase family ABE28_RS23055 PF17284 Spermidine synthase tetramerisation domain ABE28_RS23060 PF00905 Penicillin binding protein transpeptidase domain ABE28_RS23060 PF00912 Transglycosylase ABE28_RS23065 PF08741 YwhD family ABE28_RS23070 PF02163 Peptidase family M50 ABE28_RS23075 PF01361 Tautomerase enzyme ABE28_RS23085 PF01966 HD domain ABE28_RS23090 PF07293 Protein of unknown function (DUF1450) ABE28_RS23100 PF03099 Biotin/lipoate A/B protein ligase family ABE28_RS23105 PF01515 Phosphate acetyl/butaryl transferase ABE28_RS23110 PF06778 Chlorite dismutase ABE28_RS23115 PF09671 Spore coat protein (Spore_GerQ) ABE28_RS23120 PF04241 Protein of unknown function (DUF423) ABE28_RS23130 PF03167 Uracil DNA glycosylase superfamily ABE28_RS23140 PF11181 Heat induced stress protein YflT ABE28_RS23145 PF00899 ThiF family ABE28_RS23150 PF02597 ThiS family ABE28_RS23155 PF02391 MoaE protein ABE28_RS23160 PF12804 MobA-like NTP transferase domain ABE28_RS23165 PF08543 Phosphomethylpyrimidine kinase ABE28_RS23170 PF08830 Protein of unknown function (DUF1806) ABE28_RS23175 PF02585 GlcNAc-PI de-N-acetylase ABE28_RS23180 PF07690 Major Facilitator Superfamily ABE28_RS23185 PF01047 MarR family ABE28_RS23190 PF07995 Glucose / Sorbosone dehydrogenase ABE28_RS23205 PF04073 Aminoacyl-tRNA editing domain ABE28_RS23210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABE28_RS23210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABE28_RS23225 PF01923 Cobalamin adenosyltransferase ABE28_RS23240 PF02654 Cobalamin-5-phosphate synthase ABE28_RS23250 PF00155 Aminotransferase class I and II ABE28_RS23255 PF03186 CobD/Cbib protein ABE28_RS23260 PF00005 ABC transporter ABE28_RS23265 PF01032 FecCD transport family ABE28_RS23270 PF01497 Periplasmic binding protein ABE28_RS23275 PF01522 Polysaccharide deacetylase ABE28_RS23290 PF01751 Toprim domain ABE28_RS23290 PF01131 DNA topoisomerase ABE28_RS23300 PF00005 ABC transporter ABE28_RS23315 PF10920 Protein of unknown function (DUF2705) ABE28_RS23325 PF12848 ABC transporter ABE28_RS23325 PF00005 ABC transporter ABE28_RS23345 PF00270 DEAD/DEAH box helicase ABE28_RS23345 PF00271 Helicase conserved C-terminal domain ABE28_RS23350 PF00860 Permease family ABE28_RS23365 PF01266 FAD dependent oxidoreductase ABE28_RS23365 PF00355 Rieske [2Fe-2S] domain ABE28_RS23370 PF09962 Uncharacterized conserved protein (DUF2196) ABE28_RS23375 PF04402 Protein of unknown function (DUF541) ABE28_RS23380 PF01842 ACT domain ABE28_RS23380 PF00551 Formyl transferase ABE28_RS23400 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABE28_RS23405 PF00528 Binding-protein-dependent transport system inner membrane component ABE28_RS23410 PF00005 ABC transporter ABE28_RS23415 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABE28_RS23415 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABE28_RS23420 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain ABE28_RS23420 PF01740 STAS domain ABE28_RS23425 PF01641 SelR domain ABE28_RS23425 PF01625 Peptide methionine sulfoxide reductase ABE28_RS23430 PF07662 Na+ dependent nucleoside transporter C-terminus ABE28_RS23430 PF01773 Na+ dependent nucleoside transporter N-terminus ABE28_RS23440 PF18719 ArlS sensor domain ABE28_RS23440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS23440 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS23445 PF00072 Response regulator receiver domain ABE28_RS23445 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS23450 PF12704 MacB-like periplasmic core domain ABE28_RS23450 PF02687 FtsX-like permease family ABE28_RS23450 PF00005 ABC transporter ABE28_RS23455 PF00005 ABC transporter ABE28_RS23470 PF04341 Protein of unknown function, DUF485 ABE28_RS23475 PF00474 Sodium:solute symporter family ABE28_RS23500 PF12697 Alpha/beta hydrolase family ABE28_RS23505 PF00375 Sodium:dicarboxylate symporter family ABE28_RS23515 PF10672 S-adenosylmethionine-dependent methyltransferase ABE28_RS23515 PF17785 PUA-like domain ABE28_RS23525 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABE28_RS23525 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABE28_RS23530 PF13407 Periplasmic binding protein domain ABE28_RS23535 PF02653 Branched-chain amino acid transport system / permease component ABE28_RS23540 PF00005 ABC transporter ABE28_RS23545 PF05025 RbsD / FucU transport protein family ABE28_RS23550 PF00294 pfkB family carbohydrate kinase ABE28_RS23555 PF00356 Bacterial regulatory proteins, lacI family ABE28_RS23560 PF04183 IucA / IucC family ABE28_RS23560 PF06276 Ferric iron reductase FhuF-like transporter ABE28_RS23565 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABE28_RS23575 PF04183 IucA / IucC family ABE28_RS23575 PF06276 Ferric iron reductase FhuF-like transporter ABE28_RS23580 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABE28_RS23585 PF00202 Aminotransferase class-III ABE28_RS23600 PF08757 CotH kinase protein ABE28_RS23605 PF00128 Alpha amylase, catalytic domain ABE28_RS23605 PF09154 Domain of unknown function (DUF1939) ABE28_RS23610 PF01546 Peptidase family M20/M25/M40 ABE28_RS23610 PF07687 Peptidase dimerisation domain ABE28_RS23615 PF00199 Catalase ABE28_RS23615 PF06628 Catalase-related immune-responsive ABE28_RS23615 PF18011 C-terminal domain found in long catalases ABE28_RS23620 PF03880 DbpA RNA binding domain ABE28_RS23620 PF00270 DEAD/DEAH box helicase ABE28_RS23620 PF00271 Helicase conserved C-terminal domain ABE28_RS23625 PF03992 Antibiotic biosynthesis monooxygenase ABE28_RS23630 PF04055 Radical SAM superfamily ABE28_RS23635 PF02590 Predicted SPOUT methyltransferase ABE28_RS23640 PF13180 PDZ domain ABE28_RS23645 PF00753 Metallo-beta-lactamase superfamily ABE28_RS23650 PF09648 YycH protein ABE28_RS23660 PF00672 HAMP domain ABE28_RS23660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS23660 PF00512 His Kinase A (phospho-acceptor) domain ABE28_RS23660 PF13426 PAS domain ABE28_RS23665 PF00486 Transcriptional regulatory protein, C terminal ABE28_RS23665 PF00072 Response regulator receiver domain ABE28_RS23670 PF10145 Phage-related minor tail protein ABE28_RS23670 PF01464 Transglycosylase SLT domain ABE28_RS23670 PF01551 Peptidase family M23 ABE28_RS23695 PF00709 Adenylosuccinate synthetase ABE28_RS23700 PF03796 DnaB-like helicase C terminal domain ABE28_RS23700 PF00772 DnaB-like helicase N terminal domain ABE28_RS23705 PF03948 Ribosomal protein L9, C-terminal domain ABE28_RS23705 PF01281 Ribosomal protein L9, N-terminal domain ABE28_RS23710 PF01368 DHH family ABE28_RS23710 PF02272 DHHA1 domain ABE28_RS23720 PF01084 Ribosomal protein S18 ABE28_RS23725 PF00436 Single-strand binding protein family ABE28_RS23730 PF01250 Ribosomal protein S6 ABE28_RS23735 PF01926 50S ribosome-binding GTPase ABE28_RS23735 PF06071 Protein of unknown function (DUF933) ABE28_RS23740 PF06107 Bacterial protein of unknown function (DUF951) ABE28_RS23745 PF00924 Mechanosensitive ion channel ABE28_RS23750 PF06866 Protein of unknown function (DUF1256) ABE28_RS23760 PF02195 ParB-like nuclease domain ABE28_RS23760 PF17762 HTH domain found in ParB protein ABE28_RS23765 PF13614 AAA domain ABE28_RS23770 PF02195 ParB-like nuclease domain ABE28_RS23770 PF17762 HTH domain found in ParB protein ABE28_RS23775 PF02527 rRNA small subunit methyltransferase G ABE28_RS23780 PF13932 GidA associated domain ABE28_RS23780 PF01134 Glucose inhibited division protein A ABE28_RS23785 PF10396 GTP-binding protein TrmE N-terminus ABE28_RS23785 PF12631 MnmE helical domain ABE28_RS23785 PF01926 50S ribosome-binding GTPase ABE28_RS23790 PF01424 R3H domain ABE28_RS23790 PF14804 Jag N-terminus ABE28_RS23795 PF02096 60Kd inner membrane protein ABE28_RS23800 PF00825 Ribonuclease P ABE28_RS23805 PF00308 Bacterial dnaA protein ABE28_RS23805 PF08299 Bacterial dnaA protein helix-turn-helix ABE28_RS23805 PF11638 DnaA N-terminal domain ABE28_RS23810 PF02767 DNA polymerase III beta subunit, central domain ABE28_RS23810 PF02768 DNA polymerase III beta subunit, C-terminal domain ABE28_RS23810 PF00712 DNA polymerase III beta subunit, N-terminal domain ABE28_RS23820 PF02463 RecF/RecN/SMC N terminal domain ABE28_RS23825 PF04025 Domain of unknown function (DUF370) ABE28_RS23830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABE28_RS23830 PF00986 DNA gyrase B subunit, carboxyl terminus ABE28_RS23830 PF01751 Toprim domain ABE28_RS23830 PF00204 DNA gyrase B ABE28_RS23835 PF00521 DNA gyrase/topoisomerase IV, subunit A ABE28_RS23835 PF03989 DNA gyrase C-terminal domain, beta-propeller ABE28_RS23840 PF01966 HD domain ABE28_RS23940 PF04468 PSP1 C-terminal conserved region ABE28_RS23990 PF06725 3D domain ABE28_RS23990 PF07501 G5 domain ABE28_RS23990 PF03990 G5-linked-Ubiquitin-like domain ABE28_RS24015 PF00288 GHMP kinases N terminal domain ABE28_RS24015 PF08544 GHMP kinases C terminal ABE28_RS24040 PF14572 Phosphoribosyl synthetase-associated domain ABE28_RS24040 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABE28_RS24085 PF17757 UvrB interaction domain ABE28_RS24085 PF02559 CarD-like/TRCF domain ABE28_RS24085 PF00270 DEAD/DEAH box helicase ABE28_RS24085 PF03461 TRCF domain ABE28_RS24085 PF00271 Helicase conserved C-terminal domain ABE28_RS24090 PF17757 UvrB interaction domain ABE28_RS24090 PF02559 CarD-like/TRCF domain ABE28_RS24090 PF03461 TRCF domain ABE28_RS24090 PF00271 Helicase conserved C-terminal domain ABE28_RS24090 PF00270 DEAD/DEAH box helicase ABE28_RS24095 PF17757 UvrB interaction domain ABE28_RS24095 PF03461 TRCF domain ABE28_RS24095 PF00271 Helicase conserved C-terminal domain ABE28_RS24095 PF00270 DEAD/DEAH box helicase ABE28_RS24095 PF02559 CarD-like/TRCF domain ABE28_RS24165 PF00004 ATPase family associated with various cellular activities (AAA) ABE28_RS24165 PF01434 Peptidase family M41 ABE28_RS24165 PF17862 AAA+ lid domain ABE28_RS24165 PF06480 FtsH Extracellular ABE28_RS24185 PF00291 Pyridoxal-phosphate dependent enzyme