locus-tag class description DN409_RS00005 PF00308 Bacterial dnaA protein DN409_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DN409_RS00005 PF11638 DnaA N-terminal domain DN409_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DN409_RS00010 PF02767 DNA polymerase III beta subunit, central domain DN409_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DN409_RS00020 PF02463 RecF/RecN/SMC N terminal domain DN409_RS00025 PF00204 DNA gyrase B DN409_RS00025 PF01751 Toprim domain DN409_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus DN409_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DN409_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DN409_RS00060 PF14175 YaaC-like Protein DN409_RS00065 PF00478 IMP dehydrogenase / GMP reductase domain DN409_RS00065 PF00571 CBS domain DN409_RS00070 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_RS00070 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_RS00075 PF01680 SOR/SNZ family DN409_RS00080 PF01174 SNO glutamine amidotransferase family DN409_RS00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_RS00085 PF02403 Seryl-tRNA synthetase N-terminal domain DN409_RS00100 PF01712 Deoxynucleoside kinase DN409_RS00105 PF01712 Deoxynucleoside kinase DN409_RS00110 PF00857 Isochorismatase family DN409_RS00115 PF14437 MafB19-like deaminase DN409_RS00125 PF12169 DNA polymerase III subunits gamma and tau domain III DN409_RS00130 PF02575 YbaB/EbfC DNA-binding family DN409_RS00135 PF02132 RecR protein DN409_RS00135 PF13662 Toprim domain DN409_RS00140 PF10704 Protein of unknown function (DUF2508) DN409_RS00145 PF07441 SigmaK-factor processing regulatory protein BofA DN409_RS00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN409_RS00180 PF01276 Orn/Lys/Arg decarboxylase, major domain DN409_RS00185 PF02223 Thymidylate kinase DN409_RS00190 PF09115 DNA polymerase III, delta subunit, C terminal DN409_RS00195 PF04468 PSP1 C-terminal conserved region DN409_RS00200 PF06156 Initiation control protein YabA DN409_RS00205 PF05175 Methyltransferase small domain DN409_RS00210 PF01541 GIY-YIG catalytic domain DN409_RS00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN409_RS00220 PF18277 AbrB C-terminal domain DN409_RS00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_RS00225 PF09334 tRNA synthetases class I (M) DN409_RS00225 PF01588 Putative tRNA binding domain DN409_RS00225 PF08264 Anticodon-binding domain of tRNA DN409_RS00230 PF01026 TatD related DNase DN409_RS00235 PF13662 Toprim domain DN409_RS00235 PF13331 Domain of unknown function (DUF4093) DN409_RS00240 PF00398 Ribosomal RNA adenine dimethylase DN409_RS00245 PF05582 YabG peptidase U57 DN409_RS00250 PF06257 Biofilm formation stimulator VEG DN409_RS00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_RS00260 PF08544 GHMP kinases C terminal DN409_RS00260 PF00288 GHMP kinases N terminal domain DN409_RS00265 PF09182 Bacterial purine repressor, N-terminal DN409_RS00265 PF00156 Phosphoribosyl transferase domain DN409_RS00270 PF01042 Endoribonuclease L-PSP DN409_RS00275 PF04026 SpoVG DN409_RS00280 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_RS00280 PF00483 Nucleotidyl transferase DN409_RS00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DN409_RS00285 PF14572 Phosphoribosyl synthetase-associated domain DN409_RS00290 PF01195 Peptidyl-tRNA hydrolase DN409_RS00300 PF02559 CarD-like/TRCF domain DN409_RS00300 PF00271 Helicase conserved C-terminal domain DN409_RS00300 PF03461 TRCF domain DN409_RS00300 PF17757 UvrB interaction domain DN409_RS00300 PF00270 DEAD/DEAH box helicase DN409_RS00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor DN409_RS00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_RS00310 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_RS00310 PF01943 Polysaccharide biosynthesis protein DN409_RS00315 PF03819 MazG nucleotide pyrophosphohydrolase domain DN409_RS00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN409_RS00320 PF01479 S4 domain DN409_RS00325 PF07873 YabP family DN409_RS00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) DN409_RS00340 PF00575 S1 RNA binding domain DN409_RS00355 PF07228 Stage II sporulation protein E (SpoIIE) DN409_RS00360 PF11734 TilS substrate C-terminal domain DN409_RS00360 PF09179 TilS substrate binding domain DN409_RS00360 PF01171 PP-loop family DN409_RS00365 PF00156 Phosphoribosyl transferase domain DN409_RS00370 PF01434 Peptidase family M41 DN409_RS00370 PF06480 FtsH Extracellular DN409_RS00370 PF17862 AAA+ lid domain DN409_RS00370 PF00004 ATPase family associated with various cellular activities (AAA) DN409_RS00375 PF03309 Type III pantothenate kinase DN409_RS00380 PF01430 Hsp33 protein DN409_RS00385 PF00291 Pyridoxal-phosphate dependent enzyme DN409_RS00390 PF04715 Anthranilate synthase component I, N terminal region DN409_RS00390 PF00425 chorismate binding enzyme DN409_RS00395 PF00117 Glutamine amidotransferase class-I DN409_RS00400 PF01063 Amino-transferase class IV DN409_RS00405 PF00809 Pterin binding enzyme DN409_RS00410 PF02152 Dihydroneopterin aldolase DN409_RS00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DN409_RS00420 PF01381 Helix-turn-helix DN409_RS00425 PF01207 Dihydrouridine synthase (Dus) DN409_RS00430 PF00152 tRNA synthetases class II (D, K and N) DN409_RS00430 PF01336 OB-fold nucleic acid binding domain DN409_RS00515 PF05848 CtsR N-terminal HTH domain DN409_RS00515 PF17727 CtsR C-terminal dimerization domain DN409_RS00520 PF02151 UvrB/uvrC motif DN409_RS00525 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DN409_RS00530 PF00004 ATPase family associated with various cellular activities (AAA) DN409_RS00530 PF07724 AAA domain (Cdc48 subfamily) DN409_RS00530 PF17871 AAA lid domain DN409_RS00530 PF02861 Clp amino terminal domain, pathogenicity island component DN409_RS00530 PF10431 C-terminal, D2-small domain, of ClpB protein DN409_RS00535 PF18073 Rubredoxin metal binding domain DN409_RS00540 PF10635 DisA bacterial checkpoint controller linker region DN409_RS00540 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN409_RS00550 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DN409_RS00555 PF02542 YgbB family DN409_RS00560 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN409_RS00565 PF06426 Serine acetyltransferase, N-terminal DN409_RS00565 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_RS00570 PF09190 DALR domain DN409_RS00570 PF01406 tRNA synthetases class I (C) catalytic domain DN409_RS00575 PF00636 Ribonuclease III domain DN409_RS00580 PF00588 SpoU rRNA Methylase family DN409_RS00580 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN409_RS00585 PF05991 YacP-like NYN domain DN409_RS00590 PF04542 Sigma-70 region 2 DN409_RS00590 PF08281 Sigma-70, region 4 DN409_RS00595 PF00471 Ribosomal protein L33 DN409_RS00600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DN409_RS00605 PF02357 Transcription termination factor nusG DN409_RS00605 PF00467 KOW motif DN409_RS00610 PF03946 Ribosomal protein L11, N-terminal domain DN409_RS00610 PF00298 Ribosomal protein L11, RNA binding domain DN409_RS00615 PF00687 Ribosomal protein L1p/L10e family DN409_RS00620 PF00466 Ribosomal protein L10 DN409_RS00625 PF00542 Ribosomal protein L7/L12 C-terminal domain DN409_RS00625 PF16320 Ribosomal protein L7/L12 dimerisation domain DN409_RS00630 PF05175 Methyltransferase small domain DN409_RS00635 PF00562 RNA polymerase Rpb2, domain 6 DN409_RS00635 PF10385 RNA polymerase beta subunit external 1 domain DN409_RS00635 PF04563 RNA polymerase beta subunit DN409_RS00635 PF04560 RNA polymerase Rpb2, domain 7 DN409_RS00635 PF04565 RNA polymerase Rpb2, domain 3 DN409_RS00635 PF04561 RNA polymerase Rpb2, domain 2 DN409_RS00640 PF04997 RNA polymerase Rpb1, domain 1 DN409_RS00640 PF04998 RNA polymerase Rpb1, domain 5 DN409_RS00640 PF05000 RNA polymerase Rpb1, domain 4 DN409_RS00640 PF04983 RNA polymerase Rpb1, domain 3 DN409_RS00640 PF00623 RNA polymerase Rpb1, domain 2 DN409_RS00645 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN409_RS00650 PF00164 Ribosomal protein S12/S23 DN409_RS00655 PF00177 Ribosomal protein S7p/S5e DN409_RS00660 PF03144 Elongation factor Tu domain 2 DN409_RS00660 PF00679 Elongation factor G C-terminus DN409_RS00660 PF00009 Elongation factor Tu GTP binding domain DN409_RS00660 PF03764 Elongation factor G, domain IV DN409_RS00660 PF14492 Elongation Factor G, domain II DN409_RS00665 PF00009 Elongation factor Tu GTP binding domain DN409_RS00665 PF03144 Elongation factor Tu domain 2 DN409_RS00665 PF03143 Elongation factor Tu C-terminal domain DN409_RS00670 PF00338 Ribosomal protein S10p/S20e DN409_RS00675 PF00297 Ribosomal protein L3 DN409_RS00680 PF00573 Ribosomal protein L4/L1 family DN409_RS00685 PF00276 Ribosomal protein L23 DN409_RS00690 PF03947 Ribosomal Proteins L2, C-terminal domain DN409_RS00690 PF00181 Ribosomal Proteins L2, RNA binding domain DN409_RS00695 PF00203 Ribosomal protein S19 DN409_RS00700 PF00237 Ribosomal protein L22p/L17e DN409_RS00705 PF07650 KH domain DN409_RS00705 PF00189 Ribosomal protein S3, C-terminal domain DN409_RS00710 PF00252 Ribosomal protein L16p/L10e DN409_RS00715 PF00831 Ribosomal L29 protein DN409_RS00720 PF00366 Ribosomal protein S17 DN409_RS00725 PF00238 Ribosomal protein L14p/L23e DN409_RS00730 PF00467 KOW motif DN409_RS00730 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DN409_RS00735 PF00673 ribosomal L5P family C-terminus DN409_RS00735 PF00281 Ribosomal protein L5 DN409_RS00740 PF00253 Ribosomal protein S14p/S29e DN409_RS00745 PF00410 Ribosomal protein S8 DN409_RS00750 PF00347 Ribosomal protein L6 DN409_RS00755 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DN409_RS00760 PF00333 Ribosomal protein S5, N-terminal domain DN409_RS00760 PF03719 Ribosomal protein S5, C-terminal domain DN409_RS00765 PF00327 Ribosomal protein L30p/L7e DN409_RS00770 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DN409_RS00775 PF00344 SecY translocase DN409_RS00780 PF05191 Adenylate kinase, active site lid DN409_RS00785 PF00557 Metallopeptidase family M24 DN409_RS00790 PF01176 Translation initiation factor 1A / IF-1 DN409_RS00795 PF00444 Ribosomal protein L36 DN409_RS00800 PF00416 Ribosomal protein S13/S18 DN409_RS00805 PF00411 Ribosomal protein S11 DN409_RS00810 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DN409_RS00810 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DN409_RS00810 PF01000 RNA polymerase Rpb3/RpoA insert domain DN409_RS00815 PF01196 Ribosomal protein L17 DN409_RS00820 PF00005 ABC transporter DN409_RS00825 PF00005 ABC transporter DN409_RS00830 PF02361 Cobalt transport protein DN409_RS00835 PF01416 tRNA pseudouridine synthase DN409_RS00840 PF00572 Ribosomal protein L13 DN409_RS00845 PF00380 Ribosomal protein S9/S16 DN409_RS00855 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_RS00860 PF10609 NUBPL iron-transfer P-loop NTPase DN409_RS00865 PF17898 Spore germination GerD central core domain DN409_RS00870 PF14089 KinB-signalling pathway activation in sporulation DN409_RS00875 PF01522 Polysaccharide deacetylase DN409_RS00945 PF02595 Glycerate kinase family DN409_RS00950 PF00491 Arginase family DN409_RS00955 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN409_RS00960 PF07949 YbbR-like protein DN409_RS00965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN409_RS00965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN409_RS00965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN409_RS00965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN409_RS00970 PF01380 SIS domain DN409_RS00980 PF00326 Prolyl oligopeptidase family DN409_RS00980 PF07676 WD40-like Beta Propeller Repeat DN409_RS01010 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS01015 PF09383 NIL domain DN409_RS01015 PF00005 ABC transporter DN409_RS01020 PF03180 NLPA lipoprotein DN409_RS01025 PF00107 Zinc-binding dehydrogenase DN409_RS01025 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS01035 PF01565 FAD binding domain DN409_RS01040 PF07690 Major Facilitator Superfamily DN409_RS01050 PF07690 Major Facilitator Superfamily DN409_RS01070 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS01075 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS01075 PF12911 N-terminal TM domain of oligopeptide transport permease C DN409_RS01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_RS01080 PF00005 ABC transporter DN409_RS01085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_RS01085 PF00005 ABC transporter DN409_RS01090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS01105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS01110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS01115 PF00248 Aldo/keto reductase family DN409_RS01120 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN409_RS01120 PF03807 NADP oxidoreductase coenzyme F420-dependent DN409_RS01125 PF04973 Nicotinamide mononucleotide transporter DN409_RS01130 PF06800 Sugar transport protein DN409_RS01135 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS01145 PF12727 PBP superfamily domain DN409_RS01145 PF12728 Helix-turn-helix domain DN409_RS01155 PF03466 LysR substrate binding domain DN409_RS01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS01160 PF00892 EamA-like transporter family DN409_RS01165 PF14142 YrzO-like protein DN409_RS01175 PF01553 Acyltransferase DN409_RS01185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN409_RS01185 PF00356 Bacterial regulatory proteins, lacI family DN409_RS01195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_RS01195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS01210 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DN409_RS01235 PF12848 ABC transporter DN409_RS01235 PF16326 ABC transporter C-terminal domain DN409_RS01235 PF00005 ABC transporter DN409_RS01240 PF07730 Histidine kinase DN409_RS01250 PF00005 ABC transporter DN409_RS01270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS01275 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS01280 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS01280 PF12911 N-terminal TM domain of oligopeptide transport permease C DN409_RS01285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_RS01285 PF00005 ABC transporter DN409_RS01290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_RS01290 PF00005 ABC transporter DN409_RS01325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS01330 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN409_RS01340 PF13520 Amino acid permease DN409_RS01345 PF07690 Major Facilitator Superfamily DN409_RS01350 PF07478 D-ala D-ala ligase C-terminus DN409_RS01350 PF01820 D-ala D-ala ligase N-terminus DN409_RS01355 PF02875 Mur ligase family, glutamate ligase domain DN409_RS01355 PF08245 Mur ligase middle domain DN409_RS01355 PF01225 Mur ligase family, catalytic domain DN409_RS01360 PF00270 DEAD/DEAH box helicase DN409_RS01360 PF00271 Helicase conserved C-terminal domain DN409_RS01365 PF03851 UV-endonuclease UvdE DN409_RS01370 PF01694 Rhomboid family DN409_RS01375 PF01648 4'-phosphopantetheinyl transferase superfamily DN409_RS01385 PF01168 Alanine racemase, N-terminal domain DN409_RS01385 PF00842 Alanine racemase, C-terminal domain DN409_RS01390 PF01402 Ribbon-helix-helix protein, copG family DN409_RS01395 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DN409_RS01400 PF09371 Tex-like protein N-terminal domain DN409_RS01400 PF17674 HHH domain DN409_RS01400 PF00575 S1 RNA binding domain DN409_RS01400 PF16921 Tex protein YqgF-like domain DN409_RS01410 PF10263 SprT-like family DN409_RS01410 PF17283 SprT-like zinc ribbon domain DN409_RS01500 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DN409_RS01505 PF00814 Glycoprotease family DN409_RS01510 PF00583 Acetyltransferase (GNAT) family DN409_RS01515 PF00814 Glycoprotease family DN409_RS01520 PF00005 ABC transporter DN409_RS01520 PF12848 ABC transporter DN409_RS01520 PF16326 ABC transporter C-terminal domain DN409_RS01525 PF06971 Putative DNA-binding protein N-terminus DN409_RS01525 PF02629 CoA binding domain DN409_RS01535 PF02517 CPBP intramembrane metalloprotease DN409_RS01540 PF00166 Chaperonin 10 Kd subunit DN409_RS01545 PF00118 TCP-1/cpn60 chaperonin family DN409_RS01550 PF02540 NAD synthase DN409_RS01550 PF00958 GMP synthase C terminal domain DN409_RS01550 PF00117 Glutamine amidotransferase class-I DN409_RS01555 PF00860 Permease family DN409_RS01560 PF00486 Transcriptional regulatory protein, C terminal DN409_RS01560 PF00072 Response regulator receiver domain DN409_RS01565 PF00989 PAS fold DN409_RS01565 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS01565 PF16736 Single Cache-like DN409_RS01595 PF01323 DSBA-like thioredoxin domain DN409_RS01615 PF14307 Glycosyltransferase WbsX DN409_RS01615 PF05045 Rhamnan synthesis protein F DN409_RS01625 PF08241 Methyltransferase domain DN409_RS01645 PF00535 Glycosyl transferase family 2 DN409_RS01670 PF00392 Bacterial regulatory proteins, gntR family DN409_RS01670 PF00155 Aminotransferase class I and II DN409_RS01675 PF01619 Proline dehydrogenase DN409_RS01695 PF00892 EamA-like transporter family DN409_RS01725 PF00731 AIR carboxylase DN409_RS01730 PF02222 ATP-grasp domain DN409_RS01730 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DN409_RS01735 PF10397 Adenylosuccinate lyase C-terminus DN409_RS01735 PF00206 Lyase DN409_RS01740 PF01259 SAICAR synthetase DN409_RS01745 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DN409_RS01755 PF00586 AIR synthase related protein, N-terminal domain DN409_RS01755 PF02769 AIR synthase related protein, C-terminal domain DN409_RS01755 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DN409_RS01760 PF00156 Phosphoribosyl transferase domain DN409_RS01765 PF00586 AIR synthase related protein, N-terminal domain DN409_RS01765 PF02769 AIR synthase related protein, C-terminal domain DN409_RS01770 PF00551 Formyl transferase DN409_RS01775 PF02142 MGS-like domain DN409_RS01775 PF01808 AICARFT/IMPCHase bienzyme DN409_RS01780 PF02844 Phosphoribosylglycinamide synthetase, N domain DN409_RS01780 PF02843 Phosphoribosylglycinamide synthetase, C domain DN409_RS01780 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DN409_RS01805 PF01884 PcrB family DN409_RS01810 PF13361 UvrD-like helicase C-terminal domain DN409_RS01810 PF00580 UvrD/REP helicase N-terminal domain DN409_RS01815 PF00533 BRCA1 C Terminus (BRCT) domain DN409_RS01815 PF12826 Helix-hairpin-helix motif DN409_RS01815 PF03120 NAD-dependent DNA ligase OB-fold domain DN409_RS01815 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DN409_RS01815 PF01653 NAD-dependent DNA ligase adenylation domain DN409_RS01820 PF07537 CamS sex pheromone cAM373 precursor DN409_RS01825 PF01925 Sulfite exporter TauE/SafE DN409_RS01830 PF00171 Aldehyde dehydrogenase family DN409_RS01835 PF00857 Isochorismatase family DN409_RS01840 PF00005 ABC transporter DN409_RS01840 PF09383 NIL domain DN409_RS01845 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS01850 PF03180 NLPA lipoprotein DN409_RS01865 PF02374 Anion-transporting ATPase DN409_RS01865 PF17886 HSP20-like domain found in ArsA DN409_RS01870 PF01047 MarR family DN409_RS01875 PF05360 yiaA/B two helix domain DN409_RS01880 PF02686 Glu-tRNAGln amidotransferase C subunit DN409_RS01885 PF01425 Amidase DN409_RS01890 PF02637 GatB domain DN409_RS01890 PF02934 GatB/GatE catalytic domain DN409_RS01895 PF00781 Diacylglycerol kinase catalytic domain DN409_RS01900 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS01905 PF00202 Aminotransferase class-III DN409_RS01910 PF00158 Sigma-54 interaction domain DN409_RS01915 PF00171 Aldehyde dehydrogenase family DN409_RS01920 PF00893 Small Multidrug Resistance protein DN409_RS01925 PF02073 Thermophilic metalloprotease (M29) DN409_RS01940 PF07670 Nucleoside recognition DN409_RS01940 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_RS01940 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_RS01945 PF05958 tRNA (Uracil-5-)-methyltransferase DN409_RS01945 PF13847 Methyltransferase domain DN409_RS01945 PF01938 TRAM domain DN409_RS01950 PF01207 Dihydrouridine synthase (Dus) DN409_RS01955 PF13426 PAS domain DN409_RS01955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS01955 PF13188 PAS domain DN409_RS01955 PF00989 PAS fold DN409_RS01955 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS01960 PF07308 Protein of unknown function (DUF1456) DN409_RS01975 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN409_RS01975 PF13378 Enolase C-terminal domain-like DN409_RS01985 PF03553 Na+/H+ antiporter family DN409_RS01990 PF01546 Peptidase family M20/M25/M40 DN409_RS01990 PF07687 Peptidase dimerisation domain DN409_RS02000 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS02000 PF13192 Thioredoxin domain DN409_RS02005 PF00578 AhpC/TSA family DN409_RS02010 PF01636 Phosphotransferase enzyme family DN409_RS02015 PF01008 Initiation factor 2 subunit family DN409_RS02020 PF00596 Class II Aldolase and Adducin N-terminal domain DN409_RS02025 PF01032 FecCD transport family DN409_RS02030 PF01032 FecCD transport family DN409_RS02035 PF01497 Periplasmic binding protein DN409_RS02045 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS02060 PF12728 Helix-turn-helix domain DN409_RS02085 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS02085 PF00989 PAS fold DN409_RS02085 PF13188 PAS domain DN409_RS02085 PF13426 PAS domain DN409_RS02105 PF10127 RNA repair pathway DNA polymerase beta family DN409_RS02110 PF00355 Rieske [2Fe-2S] domain DN409_RS02110 PF01266 FAD dependent oxidoreductase DN409_RS02120 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS02125 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_RS02130 PF00005 ABC transporter DN409_RS02135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS02135 PF00672 HAMP domain DN409_RS02135 PF02743 Cache domain DN409_RS02140 PF08031 Berberine and berberine like DN409_RS02140 PF01565 FAD binding domain DN409_RS02145 PF00128 Alpha amylase, catalytic domain DN409_RS02145 PF16657 Maltogenic Amylase, C-terminal domain DN409_RS02150 PF00367 phosphotransferase system, EIIB DN409_RS02150 PF02378 Phosphotransferase system, EIIC DN409_RS02150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN409_RS02155 PF03372 Endonuclease/Exonuclease/phosphatase family DN409_RS02160 PF01061 ABC-2 type transporter DN409_RS02165 PF01751 Toprim domain DN409_RS02165 PF01131 DNA topoisomerase DN409_RS02170 PF02110 Hydroxyethylthiazole kinase family DN409_RS02175 PF02581 Thiamine monophosphate synthase DN409_RS02180 PF03605 Anaerobic c4-dicarboxylate membrane transporter DN409_RS02185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS02185 PF00672 HAMP domain DN409_RS02190 PF01910 Thiamine-binding protein DN409_RS02195 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS02205 PF00005 ABC transporter DN409_RS02210 PF00005 ABC transporter DN409_RS02210 PF12848 ABC transporter DN409_RS02215 PF00041 Fibronectin type III domain DN409_RS02215 PF00704 Glycosyl hydrolases family 18 DN409_RS02245 PF11700 Vacuole effluxer Atg22 like DN409_RS02260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_RS02260 PF09180 Prolyl-tRNA synthetase, C-terminal DN409_RS02260 PF03129 Anticodon binding domain DN409_RS02270 PF00480 ROK family DN409_RS02275 PF02342 TerD domain DN409_RS02280 PF02342 TerD domain DN409_RS02285 PF02342 TerD domain DN409_RS02290 PF03741 Integral membrane protein TerC family DN409_RS02295 PF14266 Putative component of 'biosynthetic module' DN409_RS02300 PF05816 Toxic anion resistance protein (TelA) DN409_RS02305 PF00689 Cation transporting ATPase, C-terminus DN409_RS02305 PF00690 Cation transporter/ATPase, N-terminus DN409_RS02310 PF06569 Protein of unknown function (DUF1128) DN409_RS02315 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN409_RS02325 PF03631 Virulence factor BrkB DN409_RS02335 PF00892 EamA-like transporter family DN409_RS02345 PF10502 Signal peptidase, peptidase S26 DN409_RS02360 PF09335 SNARE associated Golgi protein DN409_RS02375 PF16242 Pyridoxamine 5'-phosphate oxidase like DN409_RS02380 PF01699 Sodium/calcium exchanger protein DN409_RS02385 PF14167 YfkD-like protein DN409_RS02390 PF04055 Radical SAM superfamily DN409_RS02390 PF08756 YfkB-like domain DN409_RS02400 PF05681 Fumarate hydratase (Fumerase) DN409_RS02400 PF05683 Fumarase C-terminus DN409_RS02405 PF01522 Polysaccharide deacetylase DN409_RS02410 PF00730 HhH-GPD superfamily base excision DNA repair protein DN409_RS02415 PF01938 TRAM domain DN409_RS02415 PF05958 tRNA (Uracil-5-)-methyltransferase DN409_RS02420 PF01416 tRNA pseudouridine synthase DN409_RS02430 PF13426 PAS domain DN409_RS02430 PF02954 Bacterial regulatory protein, Fis family DN409_RS02430 PF00158 Sigma-54 interaction domain DN409_RS02440 PF00324 Amino acid permease DN409_RS02445 PF01546 Peptidase family M20/M25/M40 DN409_RS02445 PF07687 Peptidase dimerisation domain DN409_RS02465 PF04960 Glutaminase DN409_RS02475 PF00367 phosphotransferase system, EIIB DN409_RS02475 PF02378 Phosphotransferase system, EIIC DN409_RS02480 PF00144 Beta-lactamase DN409_RS02495 PF00535 Glycosyl transferase family 2 DN409_RS02500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN409_RS02500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN409_RS02500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN409_RS02505 PF01370 NAD dependent epimerase/dehydratase family DN409_RS02505 PF00551 Formyl transferase DN409_RS02505 PF02911 Formyl transferase, C-terminal domain DN409_RS02510 PF00535 Glycosyl transferase family 2 DN409_RS02520 PF01228 Glycine radical DN409_RS02520 PF02901 Pyruvate formate lyase-like DN409_RS02525 PF04055 Radical SAM superfamily DN409_RS02530 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DN409_RS02530 PF04101 Glycosyltransferase family 28 C-terminal domain DN409_RS02545 PF01979 Amidohydrolase family DN409_RS02550 PF01370 NAD dependent epimerase/dehydratase family DN409_RS02550 PF08338 Domain of unknown function (DUF1731) DN409_RS02555 PF02631 RecX family DN409_RS02570 PF08176 Small acid-soluble spore protein K family DN409_RS02575 PF14043 WVELL protein DN409_RS02580 PF04307 LexA-binding, inner membrane-associated putative hydrolase DN409_RS02585 PF14815 NUDIX domain DN409_RS02585 PF00730 HhH-GPD superfamily base excision DNA repair protein DN409_RS02590 PF04259 Small, acid-soluble spore protein, gamma-type DN409_RS02600 PF14182 YgaB-like protein DN409_RS02605 PF04167 Protein of unknown function (DUF402) DN409_RS02610 PF00664 ABC transporter transmembrane region DN409_RS02610 PF00005 ABC transporter DN409_RS02615 PF06081 Aromatic acid exporter family member 1 DN409_RS02620 PF04898 Glutamate synthase central domain DN409_RS02620 PF01493 GXGXG motif DN409_RS02620 PF00310 Glutamine amidotransferases class-II DN409_RS02620 PF01645 Conserved region in glutamate synthase DN409_RS02625 PF00202 Aminotransferase class-III DN409_RS02630 PF00005 ABC transporter DN409_RS02645 PF07885 Ion channel DN409_RS02650 PF00578 AhpC/TSA family DN409_RS02655 PF01475 Ferric uptake regulator family DN409_RS02660 PF11023 Zinc-ribbon containing domain DN409_RS02765 PF01709 Transcriptional regulator DN409_RS02770 PF00293 NUDIX domain DN409_RS02770 PF13344 Haloacid dehalogenase-like hydrolase DN409_RS02775 PF00912 Transglycosylase DN409_RS02775 PF00905 Penicillin binding protein transpeptidase domain DN409_RS02780 PF13462 Thioredoxin DN409_RS02790 PF08331 Domain of unknown function (DUF1730) DN409_RS02795 PF12671 Putative amidase domain DN409_RS02800 PF00588 SpoU rRNA Methylase family DN409_RS02805 PF03707 Bacterial signalling protein N terminal repeat DN409_RS02805 PF00990 Diguanylate cyclase, GGDEF domain DN409_RS02805 PF00563 EAL domain DN409_RS02810 PF08298 PrkA AAA domain DN409_RS02810 PF06798 PrkA serine protein kinase C-terminal domain DN409_RS02815 PF04285 Protein of unknown function (DUF444) DN409_RS02825 PF08453 Peptidase family M9 N-terminal DN409_RS02825 PF18496 Collagenase G catalytic helper subdomain DN409_RS02825 PF01752 Collagenase DN409_RS02835 PF01145 SPFH domain / Band 7 family DN409_RS02835 PF15975 Flotillin DN409_RS02840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS02840 PF02743 Cache domain DN409_RS02840 PF00672 HAMP domain DN409_RS02845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS02845 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN409_RS02845 PF00989 PAS fold DN409_RS02845 PF17203 Single cache domain 3 DN409_RS02850 PF00072 Response regulator receiver domain DN409_RS02850 PF12431 Transcriptional regulator DN409_RS02855 PF03600 Citrate transporter DN409_RS02880 PF04309 Glycerol-3-phosphate responsive antiterminator DN409_RS02885 PF00005 ABC transporter DN409_RS02885 PF17912 MalK OB fold domain DN409_RS02890 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS02895 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS02900 PF13416 Bacterial extracellular solute-binding protein DN409_RS02905 PF00149 Calcineurin-like phosphoesterase DN409_RS02910 PF00486 Transcriptional regulatory protein, C terminal DN409_RS02910 PF00072 Response regulator receiver domain DN409_RS02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS02915 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS02925 PF13529 Peptidase_C39 like family DN409_RS02930 PF00672 HAMP domain DN409_RS02930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS02930 PF02743 Cache domain DN409_RS02935 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN409_RS02935 PF00989 PAS fold DN409_RS02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS02935 PF17203 Single cache domain 3 DN409_RS02940 PF00072 Response regulator receiver domain DN409_RS02945 PF03390 2-hydroxycarboxylate transporter family DN409_RS02950 PF03949 Malic enzyme, NAD binding domain DN409_RS02950 PF00390 Malic enzyme, N-terminal domain DN409_RS02960 PF00892 EamA-like transporter family DN409_RS02965 PF00392 Bacterial regulatory proteins, gntR family DN409_RS02965 PF00155 Aminotransferase class I and II DN409_RS02975 PF00672 HAMP domain DN409_RS02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS02975 PF00989 PAS fold DN409_RS02975 PF18698 Histidine kinase sensor domain DN409_RS02975 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS02980 PF00486 Transcriptional regulatory protein, C terminal DN409_RS02980 PF00072 Response regulator receiver domain DN409_RS02985 PF00583 Acetyltransferase (GNAT) family DN409_RS02985 PF13508 Acetyltransferase (GNAT) domain DN409_RS02990 PF02634 FdhD/NarQ family DN409_RS02995 PF01568 Molydopterin dinucleotide binding domain DN409_RS02995 PF00384 Molybdopterin oxidoreductase DN409_RS02995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN409_RS02995 PF00037 4Fe-4S binding domain DN409_RS02995 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN409_RS03010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN409_RS03010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN409_RS03015 PF13520 Amino acid permease DN409_RS03025 PF01022 Bacterial regulatory protein, arsR family DN409_RS03030 PF00403 Heavy-metal-associated domain DN409_RS03035 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DN409_RS03035 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DN409_RS03035 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DN409_RS03050 PF01447 Thermolysin metallopeptidase, catalytic domain DN409_RS03050 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN409_RS03050 PF03413 Peptidase propeptide and YPEB domain DN409_RS03050 PF07504 Fungalysin/Thermolysin Propeptide Motif DN409_RS03070 PF04294 VanW like protein DN409_RS03075 PF03816 Cell envelope-related transcriptional attenuator domain DN409_RS03080 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_RS03080 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_RS03085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS03090 PF00571 CBS domain DN409_RS03090 PF01595 Cyclin M transmembrane N-terminal domain DN409_RS03090 PF03471 Transporter associated domain DN409_RS03095 PF00206 Lyase DN409_RS03095 PF10415 Fumarase C C-terminus DN409_RS03100 PF02652 L-lactate permease DN409_RS03105 PF00578 AhpC/TSA family DN409_RS03115 PF01022 Bacterial regulatory protein, arsR family DN409_RS03120 PF08141 Small acid-soluble spore protein H family DN409_RS03125 PF00854 POT family DN409_RS03130 PF01497 Periplasmic binding protein DN409_RS03135 PF01032 FecCD transport family DN409_RS03140 PF01032 FecCD transport family DN409_RS03145 PF00005 ABC transporter DN409_RS03150 PF08003 Protein of unknown function (DUF1698) DN409_RS03155 PF00155 Aminotransferase class I and II DN409_RS03160 PF01370 NAD dependent epimerase/dehydratase family DN409_RS03165 PF13344 Haloacid dehalogenase-like hydrolase DN409_RS03165 PF00293 NUDIX domain DN409_RS03170 PF00092 von Willebrand factor type A domain DN409_RS03175 PF07728 AAA domain (dynein-related subfamily) DN409_RS03180 PF13091 PLD-like domain DN409_RS03180 PF13396 Phospholipase_D-nuclease N-terminal DN409_RS03190 PF00563 EAL domain DN409_RS03190 PF03707 Bacterial signalling protein N terminal repeat DN409_RS03190 PF00990 Diguanylate cyclase, GGDEF domain DN409_RS03195 PF13520 Amino acid permease DN409_RS03200 PF07702 UTRA domain DN409_RS03200 PF00392 Bacterial regulatory proteins, gntR family DN409_RS03210 PF00367 phosphotransferase system, EIIB DN409_RS03210 PF02378 Phosphotransferase system, EIIC DN409_RS03215 PF16657 Maltogenic Amylase, C-terminal domain DN409_RS03215 PF00128 Alpha amylase, catalytic domain DN409_RS03230 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_RS03235 PF13492 GAF domain DN409_RS03235 PF07730 Histidine kinase DN409_RS03235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS03240 PF00196 Bacterial regulatory proteins, luxR family DN409_RS03240 PF00072 Response regulator receiver domain DN409_RS03245 PF02225 PA domain DN409_RS03245 PF00082 Subtilase family DN409_RS03245 PF13860 FlgD Ig-like domain DN409_RS03245 PF05922 Peptidase inhibitor I9 DN409_RS03250 PF12389 Camelysin metallo-endopeptidase DN409_RS03260 PF01636 Phosphotransferase enzyme family DN409_RS03265 PF01235 Sodium:alanine symporter family DN409_RS03270 PF00005 ABC transporter DN409_RS03275 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_RS03280 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS03285 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS03290 PF00324 Amino acid permease DN409_RS03320 PF08279 HTH domain DN409_RS03320 PF13280 WYL domain DN409_RS03325 PF01872 RibD C-terminal domain DN409_RS03330 PF00989 PAS fold DN409_RS03330 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS03330 PF18698 Histidine kinase sensor domain DN409_RS03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS03330 PF00672 HAMP domain DN409_RS03335 PF00486 Transcriptional regulatory protein, C terminal DN409_RS03335 PF00072 Response regulator receiver domain DN409_RS03345 PF01740 STAS domain DN409_RS03345 PF00916 Sulfate permease family DN409_RS03350 PF00582 Universal stress protein family DN409_RS03360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS03365 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS03370 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS03375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_RS03375 PF00005 ABC transporter DN409_RS03380 PF00005 ABC transporter DN409_RS03380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_RS03385 PF07690 Major Facilitator Superfamily DN409_RS03390 PF01047 MarR family DN409_RS03395 PF07690 Major Facilitator Superfamily DN409_RS03400 PF00356 Bacterial regulatory proteins, lacI family DN409_RS03405 PF00294 pfkB family carbohydrate kinase DN409_RS03410 PF05025 RbsD / FucU transport protein family DN409_RS03415 PF00005 ABC transporter DN409_RS03420 PF02653 Branched-chain amino acid transport system / permease component DN409_RS03425 PF13407 Periplasmic binding protein domain DN409_RS03430 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN409_RS03435 PF05547 Immune inhibitor A peptidase M6 DN409_RS03450 PF07690 Major Facilitator Superfamily DN409_RS03455 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS03455 PF00107 Zinc-binding dehydrogenase DN409_RS03465 PF00882 Zinc dependent phospholipase C DN409_RS03470 PF03372 Endonuclease/Exonuclease/phosphatase family DN409_RS03495 PF02673 Bacitracin resistance protein BacA DN409_RS03500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS03500 PF02743 Cache domain DN409_RS03500 PF00672 HAMP domain DN409_RS03505 PF03990 G5-linked-Ubiquitin-like domain DN409_RS03505 PF07501 G5 domain DN409_RS03505 PF06725 3D domain DN409_RS03510 PF01381 Helix-turn-helix DN409_RS03520 PF04203 Sortase domain DN409_RS03530 PF00854 POT family DN409_RS03535 PF05525 Branched-chain amino acid transport protein DN409_RS03550 PF00324 Amino acid permease DN409_RS03555 PF00860 Permease family DN409_RS03570 PF13673 Acetyltransferase (GNAT) domain DN409_RS03580 PF02254 TrkA-N domain DN409_RS03580 PF02080 TrkA-C domain DN409_RS03580 PF00999 Sodium/hydrogen exchanger family DN409_RS03595 PF00510 Cytochrome c oxidase subunit III DN409_RS03600 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN409_RS03605 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DN409_RS03610 PF00324 Amino acid permease DN409_RS03615 PF13529 Peptidase_C39 like family DN409_RS03620 PF07687 Peptidase dimerisation domain DN409_RS03620 PF01546 Peptidase family M20/M25/M40 DN409_RS03625 PF11755 Protein of unknown function (DUF3311) DN409_RS03630 PF00474 Sodium:solute symporter family DN409_RS03635 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_RS03640 PF03845 Spore germination protein DN409_RS03645 PF05504 Spore germination B3/ GerAC like, C-terminal DN409_RS03650 PF02421 Ferrous iron transport protein B DN409_RS03650 PF07664 Ferrous iron transport protein B C terminus DN409_RS03650 PF17910 FeoB cytosolic helical domain DN409_RS03650 PF07670 Nucleoside recognition DN409_RS03655 PF02421 Ferrous iron transport protein B DN409_RS03655 PF07670 Nucleoside recognition DN409_RS03655 PF17910 FeoB cytosolic helical domain DN409_RS03655 PF07664 Ferrous iron transport protein B C terminus DN409_RS03665 PF12849 PBP superfamily domain DN409_RS03670 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS03675 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS03685 PF00873 AcrB/AcrD/AcrF family DN409_RS03805 PF00571 CBS domain DN409_RS03820 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_RS03820 PF08239 Bacterial SH3 domain DN409_RS03825 PF03070 TENA/THI-4/PQQC family DN409_RS03830 PF00005 ABC transporter DN409_RS03835 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS03840 PF09084 NMT1/THI5 like DN409_RS03845 PF02581 Thiamine monophosphate synthase DN409_RS03850 PF01266 FAD dependent oxidoreductase DN409_RS03855 PF02597 ThiS family DN409_RS03860 PF05690 Thiazole biosynthesis protein ThiG DN409_RS03865 PF00899 ThiF family DN409_RS03870 PF08543 Phosphomethylpyrimidine kinase DN409_RS03895 PF03814 Potassium-transporting ATPase A subunit DN409_RS03905 PF02669 K+-transporting ATPase, c chain DN409_RS03910 PF02702 Osmosensitive K+ channel His kinase sensor domain DN409_RS03915 PF07690 Major Facilitator Superfamily DN409_RS03920 PF01047 MarR family DN409_RS03930 PF02653 Branched-chain amino acid transport system / permease component DN409_RS03935 PF00005 ABC transporter DN409_RS03940 PF13407 Periplasmic binding protein domain DN409_RS03945 PF00860 Permease family DN409_RS03955 PF17969 L,D-transpeptidase C-terminal domain DN409_RS03955 PF03734 L,D-transpeptidase catalytic domain DN409_RS03970 PF00085 Thioredoxin DN409_RS03975 PF02600 Disulfide bond formation protein DsbB DN409_RS03980 PF14148 YhdB-like protein DN409_RS03990 PF03845 Spore germination protein DN409_RS04000 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_RS04010 PF00881 Nitroreductase family DN409_RS04015 PF04293 SpoVR like protein DN409_RS04040 PF02583 Metal-sensitive transcriptional repressor DN409_RS04045 PF01206 Sulfurtransferase TusA DN409_RS04045 PF00581 Rhodanese-like domain DN409_RS04050 PF00581 Rhodanese-like domain DN409_RS04050 PF00753 Metallo-beta-lactamase superfamily DN409_RS04055 PF01206 Sulfurtransferase TusA DN409_RS04060 PF01206 Sulfurtransferase TusA DN409_RS04060 PF00581 Rhodanese-like domain DN409_RS04065 PF13686 DsrE/DsrF/DrsH-like family DN409_RS04070 PF01925 Sulfite exporter TauE/SafE DN409_RS04080 PF03816 Cell envelope-related transcriptional attenuator domain DN409_RS04085 PF00107 Zinc-binding dehydrogenase DN409_RS04085 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS04090 PF02690 Na+/Pi-cotransporter DN409_RS04095 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS04095 PF00107 Zinc-binding dehydrogenase DN409_RS04100 PF07690 Major Facilitator Superfamily DN409_RS04115 PF05043 Mga helix-turn-helix domain DN409_RS04115 PF00874 PRD domain DN409_RS04115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN409_RS04115 PF08279 HTH domain DN409_RS04120 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN409_RS04125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN409_RS04130 PF02378 Phosphotransferase system, EIIC DN409_RS04145 PF06725 3D domain DN409_RS04145 PF01476 LysM domain DN409_RS04150 PF12704 MacB-like periplasmic core domain DN409_RS04150 PF02687 FtsX-like permease family DN409_RS04155 PF00005 ABC transporter DN409_RS04165 PF09529 Integral membrane protein (intg_mem_TP0381) DN409_RS04180 PF02687 FtsX-like permease family DN409_RS04185 PF05525 Branched-chain amino acid transport protein DN409_RS04190 PF05067 Manganese containing catalase DN409_RS04195 PF12652 CotJB protein DN409_RS04200 PF11007 Spore coat associated protein JA (CotJA) DN409_RS04220 PF09335 SNARE associated Golgi protein DN409_RS04250 PF13520 Amino acid permease DN409_RS04255 PF00999 Sodium/hydrogen exchanger family DN409_RS04265 PF01418 Helix-turn-helix domain, rpiR family DN409_RS04265 PF01380 SIS domain DN409_RS04270 PF13580 SIS domain DN409_RS04275 PF00367 phosphotransferase system, EIIB DN409_RS04275 PF02378 Phosphotransferase system, EIIC DN409_RS04285 PF07681 DoxX DN409_RS04305 PF00892 EamA-like transporter family DN409_RS04310 PF01037 Lrp/AsnC ligand binding domain DN409_RS04320 PF00106 short chain dehydrogenase DN409_RS04325 PF13411 MerR HTH family regulatory protein DN409_RS04330 PF00893 Small Multidrug Resistance protein DN409_RS04335 PF00893 Small Multidrug Resistance protein DN409_RS04340 PF17934 Tetracyclin repressor-like, C-terminal domain DN409_RS04340 PF00440 Bacterial regulatory proteins, tetR family DN409_RS04345 PF07690 Major Facilitator Superfamily DN409_RS04350 PF01638 HxlR-like helix-turn-helix DN409_RS04360 PF02525 Flavodoxin-like fold DN409_RS04370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS04370 PF12793 Sugar transport-related sRNA regulator N-term DN409_RS04375 PF07690 Major Facilitator Superfamily DN409_RS04385 PF01965 DJ-1/PfpI family DN409_RS04395 PF13520 Amino acid permease DN409_RS04400 PF00171 Aldehyde dehydrogenase family DN409_RS04415 PF00005 ABC transporter DN409_RS04415 PF00664 ABC transporter transmembrane region DN409_RS04420 PF00664 ABC transporter transmembrane region DN409_RS04420 PF00005 ABC transporter DN409_RS04425 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_RS04430 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS04435 PF00005 ABC transporter DN409_RS04440 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_RS04450 PF14398 YheC/D like ATP-grasp DN409_RS04460 PF04286 Protein of unknown function (DUF445) DN409_RS04465 PF06133 Control of competence regulator ComK, YlbF/YmcA DN409_RS04480 PF00205 Thiamine pyrophosphate enzyme, central domain DN409_RS04480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_RS04480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_RS04485 PF03306 Alpha-acetolactate decarboxylase DN409_RS04490 PF00535 Glycosyl transferase family 2 DN409_RS04495 PF00535 Glycosyl transferase family 2 DN409_RS04500 PF02245 Methylpurine-DNA glycosylase (MPG) DN409_RS04510 PF17210 SdrD B-like domain DN409_RS04510 PF00746 LPXTG cell wall anchor motif DN409_RS04510 PF04650 YSIRK type signal peptide DN409_RS04510 PF17961 Bacterial Ig domain DN409_RS04510 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DN409_RS04515 PF04055 Radical SAM superfamily DN409_RS04520 PF00501 AMP-binding enzyme DN409_RS04520 PF13193 AMP-binding enzyme C-terminal domain DN409_RS04525 PF09335 SNARE associated Golgi protein DN409_RS04535 PF06445 GyrI-like small molecule binding domain DN409_RS04535 PF13411 MerR HTH family regulatory protein DN409_RS04545 PF01740 STAS domain DN409_RS04545 PF00916 Sulfate permease family DN409_RS04560 PF07516 SecA Wing and Scaffold domain DN409_RS04560 PF01043 SecA preprotein cross-linking domain DN409_RS04560 PF07517 SecA DEAD-like domain DN409_RS04565 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_RS04565 PF01943 Polysaccharide biosynthesis protein DN409_RS04575 PF13205 Bacterial Ig-like domain DN409_RS04575 PF00395 S-layer homology domain DN409_RS04575 PF02368 Bacterial Ig-like domain (group 2) DN409_RS04580 PF00395 S-layer homology domain DN409_RS04590 PF03062 MBOAT, membrane-bound O-acyltransferase family DN409_RS04605 PF00378 Enoyl-CoA hydratase/isomerase DN409_RS04620 PF05343 M42 glutamyl aminopeptidase DN409_RS04625 PF00395 S-layer homology domain DN409_RS04625 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_RS04635 PF05163 DinB family DN409_RS04640 PF11121 Protein of unknown function (DUF2639) DN409_RS04650 PF08943 CsiD DN409_RS04655 PF01266 FAD dependent oxidoreductase DN409_RS04670 PF02423 Ornithine cyclodeaminase/mu-crystallin family DN409_RS04680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS04690 PF12911 N-terminal TM domain of oligopeptide transport permease C DN409_RS04690 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS04695 PF00005 ABC transporter DN409_RS04695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_RS04700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_RS04700 PF00005 ABC transporter DN409_RS04720 PF00083 Sugar (and other) transporter DN409_RS04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS04725 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN409_RS04730 PF08279 HTH domain DN409_RS04730 PF00072 Response regulator receiver domain DN409_RS04730 PF12431 Transcriptional regulator DN409_RS04735 PF03401 Tripartite tricarboxylate transporter family receptor DN409_RS04750 PF02976 DNA mismatch repair enzyme MutH DN409_RS04755 PF02976 DNA mismatch repair enzyme MutH DN409_RS04760 PF00145 C-5 cytosine-specific DNA methylase DN409_RS04765 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DN409_RS04765 PF08463 EcoEI R protein C-terminal DN409_RS04765 PF00271 Helicase conserved C-terminal domain DN409_RS04765 PF04851 Type III restriction enzyme, res subunit DN409_RS04815 PF03796 DnaB-like helicase C terminal domain DN409_RS04815 PF00772 DnaB-like helicase N terminal domain DN409_RS04835 PF04012 PspA/IM30 family DN409_RS04845 PF07690 Major Facilitator Superfamily DN409_RS04885 PF01066 CDP-alcohol phosphatidyltransferase DN409_RS04945 PF01337 Barstar (barnase inhibitor) DN409_RS04950 PF07690 Major Facilitator Superfamily DN409_RS04975 PF09680 Family of unknown function DN409_RS04980 PF02733 Dak1 domain DN409_RS05000 PF02733 Dak1 domain DN409_RS05005 PF02525 Flavodoxin-like fold DN409_RS05010 PF02082 Transcriptional regulator DN409_RS05015 PF02734 DAK2 domain DN409_RS05035 PF00296 Luciferase-like monooxygenase DN409_RS05045 PF05547 Immune inhibitor A peptidase M6 DN409_RS05050 PF04294 VanW like protein DN409_RS05060 PF00395 S-layer homology domain DN409_RS05080 PF00282 Pyridoxal-dependent decarboxylase conserved domain DN409_RS05100 PF02872 5'-nucleotidase, C-terminal domain DN409_RS05100 PF00149 Calcineurin-like phosphoesterase DN409_RS05100 PF00565 Staphylococcal nuclease homologue DN409_RS05100 PF00746 LPXTG cell wall anchor motif DN409_RS05145 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DN409_RS05160 PF01906 Putative heavy-metal-binding DN409_RS05170 PF07690 Major Facilitator Superfamily DN409_RS05175 PF07729 FCD domain DN409_RS05175 PF00392 Bacterial regulatory proteins, gntR family DN409_RS05180 PF00107 Zinc-binding dehydrogenase DN409_RS05180 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS05185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS05185 PF07730 Histidine kinase DN409_RS05190 PF00196 Bacterial regulatory proteins, luxR family DN409_RS05190 PF00072 Response regulator receiver domain DN409_RS05205 PF11121 Protein of unknown function (DUF2639) DN409_RS05220 PF00149 Calcineurin-like phosphoesterase DN409_RS05225 PF13514 AAA domain DN409_RS05230 PF01336 OB-fold nucleic acid binding domain DN409_RS05230 PF01966 HD domain DN409_RS05235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS05240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS05245 PF18801 response regulator aspartate phosphatase H, N terminal DN409_RS05245 PF17874 MalT-like TPR region DN409_RS05255 PF08386 TAP-like protein DN409_RS05255 PF00561 alpha/beta hydrolase fold DN409_RS05260 PF14147 Sporulation protein YhaL DN409_RS05270 PF01381 Helix-turn-helix DN409_RS05275 PF04309 Glycerol-3-phosphate responsive antiterminator DN409_RS05280 PF00230 Major intrinsic protein DN409_RS05285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN409_RS05285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN409_RS05290 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DN409_RS05290 PF01266 FAD dependent oxidoreductase DN409_RS05295 PF04542 Sigma-70 region 2 DN409_RS05295 PF08281 Sigma-70, region 4 DN409_RS05310 PF13538 UvrD-like helicase C-terminal domain DN409_RS05330 PF01047 MarR family DN409_RS05340 PF01230 HIT domain DN409_RS05345 PF00005 ABC transporter DN409_RS05350 PF05975 Bacterial ABC transporter protein EcsB DN409_RS05355 PF12787 EcsC protein family DN409_RS05360 PF02754 Cysteine-rich domain DN409_RS05365 PF11870 Domain of unknown function (DUF3390) DN409_RS05365 PF13183 4Fe-4S dicluster domain DN409_RS05365 PF02589 LUD domain DN409_RS05370 PF02589 LUD domain DN409_RS05415 PF17934 Tetracyclin repressor-like, C-terminal domain DN409_RS05415 PF00440 Bacterial regulatory proteins, tetR family DN409_RS05420 PF03703 Bacterial PH domain DN409_RS05425 PF03703 Bacterial PH domain DN409_RS05465 PF03703 Bacterial PH domain DN409_RS05470 PF03703 Bacterial PH domain DN409_RS05475 PF03992 Antibiotic biosynthesis monooxygenase DN409_RS05480 PF00912 Transglycosylase DN409_RS05480 PF00905 Penicillin binding protein transpeptidase domain DN409_RS05485 PF01208 Uroporphyrinogen decarboxylase (URO-D) DN409_RS05490 PF00762 Ferrochelatase DN409_RS05495 PF01593 Flavin containing amine oxidoreductase DN409_RS05515 PF17932 Tetracyclin repressor-like, C-terminal domain DN409_RS05515 PF00440 Bacterial regulatory proteins, tetR family DN409_RS05540 PF04893 Yip1 domain DN409_RS05555 PF00356 Bacterial regulatory proteins, lacI family DN409_RS05560 PF14149 YhfH-like protein DN409_RS05565 PF12706 Beta-lactamase superfamily domain DN409_RS05570 PF03099 Biotin/lipoate A/B protein ligase family DN409_RS05570 PF10437 Bacterial lipoate protein ligase C-terminus DN409_RS05580 PF00501 AMP-binding enzyme DN409_RS05580 PF13193 AMP-binding enzyme C-terminal domain DN409_RS05590 PF00395 S-layer homology domain DN409_RS05590 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_RS05600 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS05605 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS05610 PF17850 CysA C-terminal regulatory domain DN409_RS05610 PF00005 ABC transporter DN409_RS05610 PF12857 TOBE-like domain DN409_RS05650 PF00149 Calcineurin-like phosphoesterase DN409_RS05655 PF01966 HD domain DN409_RS05670 PF04542 Sigma-70 region 2 DN409_RS05670 PF08281 Sigma-70, region 4 DN409_RS05680 PF06445 GyrI-like small molecule binding domain DN409_RS05680 PF12833 Helix-turn-helix domain DN409_RS05685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS05685 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS05690 PF00486 Transcriptional regulatory protein, C terminal DN409_RS05690 PF00072 Response regulator receiver domain DN409_RS05710 PF01435 Peptidase family M48 DN409_RS05710 PF16491 CAAX prenyl protease N-terminal, five membrane helices DN409_RS05715 PF00892 EamA-like transporter family DN409_RS05720 PF03424 Carbohydrate binding domain (family 17/28) DN409_RS05720 PF00150 Cellulase (glycosyl hydrolase family 5) DN409_RS05720 PF00395 S-layer homology domain DN409_RS05740 PF00395 S-layer homology domain DN409_RS05745 PF01274 Malate synthase DN409_RS05750 PF00463 Isocitrate lyase family DN409_RS05760 PF00313 'Cold-shock' DNA-binding domain DN409_RS05780 PF06338 ComK protein DN409_RS05790 PF09335 SNARE associated Golgi protein DN409_RS05795 PF10502 Signal peptidase, peptidase S26 DN409_RS05800 PF13361 UvrD-like helicase C-terminal domain DN409_RS05800 PF12705 PD-(D/E)XK nuclease superfamily DN409_RS05805 PF13361 UvrD-like helicase C-terminal domain DN409_RS05805 PF00580 UvrD/REP helicase N-terminal domain DN409_RS05805 PF12705 PD-(D/E)XK nuclease superfamily DN409_RS05820 PF10676 Spore germination protein gerPA/gerPF DN409_RS05825 PF10970 Spore germination protein GerPE DN409_RS05835 PF10737 Spore germination protein GerPC DN409_RS05840 PF10803 Spore germination GerPB DN409_RS05845 PF10676 Spore germination protein gerPA/gerPF DN409_RS05850 PF09388 Spo0E like sporulation regulatory protein DN409_RS05855 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN409_RS05865 PF00202 Aminotransferase class-III DN409_RS05870 PF07457 Protein of unknown function (DUF1516) DN409_RS05880 PF13537 Glutamine amidotransferase domain DN409_RS05880 PF00733 Asparagine synthase DN409_RS05890 PF00199 Catalase DN409_RS05890 PF06628 Catalase-related immune-responsive DN409_RS05895 PF00909 Ammonium Transporter Family DN409_RS05900 PF00128 Alpha amylase, catalytic domain DN409_RS05905 PF04461 Protein of unknown function (DUF520) DN409_RS05910 PF17783 CvfB-like winged helix domain DN409_RS05910 PF13509 S1 domain DN409_RS05925 PF02559 CarD-like/TRCF domain DN409_RS05960 PF00639 PPIC-type PPIASE domain DN409_RS05970 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS05970 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_RS05990 PF14168 YjzC-like protein DN409_RS05995 PF07724 AAA domain (Cdc48 subfamily) DN409_RS05995 PF17871 AAA lid domain DN409_RS05995 PF02861 Clp amino terminal domain, pathogenicity island component DN409_RS05995 PF10431 C-terminal, D2-small domain, of ClpB protein DN409_RS05995 PF00004 ATPase family associated with various cellular activities (AAA) DN409_RS06015 PF10815 ComZ DN409_RS06020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN409_RS06020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN409_RS06025 PF02801 Beta-ketoacyl synthase, C-terminal domain DN409_RS06025 PF00109 Beta-ketoacyl synthase, N-terminal domain DN409_RS06030 PF10026 Predicted Zn-dependent protease (DUF2268) DN409_RS06035 PF12227 Protein of unknown function (DUF3603) DN409_RS06050 PF00579 tRNA synthetases class I (W and Y) DN409_RS06065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS06075 PF12911 N-terminal TM domain of oligopeptide transport permease C DN409_RS06080 PF00005 ABC transporter DN409_RS06080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_RS06085 PF00005 ABC transporter DN409_RS06085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_RS06090 PF01554 MatE DN409_RS06095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS06110 PF03960 ArsC family DN409_RS06115 PF03741 Integral membrane protein TerC family DN409_RS06120 PF05389 Negative regulator of genetic competence (MecA) DN409_RS06125 PF13091 PLD-like domain DN409_RS06125 PF13396 Phospholipase_D-nuclease N-terminal DN409_RS06135 PF01432 Peptidase family M3 DN409_RS06135 PF08439 Oligopeptidase F DN409_RS06145 PF01152 Bacterial-like globin DN409_RS06150 PF01928 CYTH domain DN409_RS06160 PF04607 Region found in RelA / SpoT proteins DN409_RS06165 PF01513 ATP-NAD kinase DN409_RS06170 PF00849 RNA pseudouridylate synthase DN409_RS06180 PF00149 Calcineurin-like phosphoesterase DN409_RS06185 PF01098 Cell cycle protein DN409_RS06190 PF00535 Glycosyl transferase family 2 DN409_RS06195 PF08241 Methyltransferase domain DN409_RS06200 PF05711 Macrocin-O-methyltransferase (TylF) DN409_RS06210 PF13181 Tetratricopeptide repeat DN409_RS06210 PF00535 Glycosyl transferase family 2 DN409_RS06230 PF00483 Nucleotidyl transferase DN409_RS06235 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DN409_RS06240 PF16363 GDP-mannose 4,6 dehydratase DN409_RS06245 PF04321 RmlD substrate binding domain DN409_RS06265 PF07098 Protein of unknown function (DUF1360) DN409_RS06285 PF13361 UvrD-like helicase C-terminal domain DN409_RS06285 PF00580 UvrD/REP helicase N-terminal domain DN409_RS06290 PF13673 Acetyltransferase (GNAT) domain DN409_RS06300 PF00756 Putative esterase DN409_RS06325 PF02368 Bacterial Ig-like domain (group 2) DN409_RS06330 PF00474 Sodium:solute symporter family DN409_RS06340 PF00425 chorismate binding enzyme DN409_RS06340 PF04715 Anthranilate synthase component I, N terminal region DN409_RS06345 PF00591 Glycosyl transferase family, a/b domain DN409_RS06345 PF02885 Glycosyl transferase family, helical bundle domain DN409_RS06345 PF00117 Glutamine amidotransferase class-I DN409_RS06350 PF02885 Glycosyl transferase family, helical bundle domain DN409_RS06350 PF00591 Glycosyl transferase family, a/b domain DN409_RS06355 PF00218 Indole-3-glycerol phosphate synthase DN409_RS06360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DN409_RS06365 PF00291 Pyridoxal-phosphate dependent enzyme DN409_RS06370 PF00290 Tryptophan synthase alpha chain DN409_RS06380 PF02652 L-lactate permease DN409_RS06385 PF10042 Uncharacterized conserved protein (DUF2278) DN409_RS06420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN409_RS06420 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS06435 PF01209 ubiE/COQ5 methyltransferase family DN409_RS06455 PF02817 e3 binding domain DN409_RS06455 PF00364 Biotin-requiring enzyme DN409_RS06455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN409_RS06460 PF16870 2-oxoglutarate dehydrogenase C-terminal DN409_RS06460 PF00676 Dehydrogenase E1 component DN409_RS06460 PF02779 Transketolase, pyrimidine binding domain DN409_RS06465 PF01381 Helix-turn-helix DN409_RS06530 PF00589 Phage integrase family DN409_RS06530 PF02899 Phage integrase, N-terminal SAM-like domain DN409_RS06550 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_RS06550 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_RS06560 PF12389 Camelysin metallo-endopeptidase DN409_RS06575 PF12389 Camelysin metallo-endopeptidase DN409_RS06580 PF08671 Anti-repressor SinI DN409_RS06580 PF01381 Helix-turn-helix DN409_RS06590 PF05547 Immune inhibitor A peptidase M6 DN409_RS06595 PF00171 Aldehyde dehydrogenase family DN409_RS06600 PF00005 ABC transporter DN409_RS06600 PF08402 TOBE domain DN409_RS06605 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS06610 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS06615 PF13416 Bacterial extracellular solute-binding protein DN409_RS06625 PF03176 MMPL family DN409_RS06635 PF00849 RNA pseudouridylate synthase DN409_RS06635 PF01479 S4 domain DN409_RS06645 PF00188 Cysteine-rich secretory protein family DN409_RS06650 PF13183 4Fe-4S dicluster domain DN409_RS06650 PF02754 Cysteine-rich domain DN409_RS06655 PF01565 FAD binding domain DN409_RS06655 PF02913 FAD linked oxidases, C-terminal domain DN409_RS06660 PF05651 Putative sugar diacid recognition DN409_RS06660 PF17853 GGDEF-like domain DN409_RS06660 PF13556 PucR C-terminal helix-turn-helix domain DN409_RS06670 PF00486 Transcriptional regulatory protein, C terminal DN409_RS06670 PF00072 Response regulator receiver domain DN409_RS06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS06675 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS06675 PF00672 HAMP domain DN409_RS06675 PF18698 Histidine kinase sensor domain DN409_RS06675 PF00989 PAS fold DN409_RS06680 PF07729 FCD domain DN409_RS06680 PF00392 Bacterial regulatory proteins, gntR family DN409_RS06685 PF02754 Cysteine-rich domain DN409_RS06690 PF11870 Domain of unknown function (DUF3390) DN409_RS06690 PF13183 4Fe-4S dicluster domain DN409_RS06690 PF02589 LUD domain DN409_RS06695 PF02589 LUD domain DN409_RS06700 PF01478 Type IV leader peptidase family DN409_RS06700 PF06750 Bacterial Peptidase A24 N-terminal domain DN409_RS06710 PF01226 Formate/nitrite transporter DN409_RS06715 PF03741 Integral membrane protein TerC family DN409_RS06720 PF02386 Cation transport protein DN409_RS06725 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_RS06730 PF01575 MaoC like domain DN409_RS06755 PF00561 alpha/beta hydrolase fold DN409_RS06765 PF02386 Cation transport protein DN409_RS06785 PF00005 ABC transporter DN409_RS06785 PF08402 TOBE domain DN409_RS06790 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS06795 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS06800 PF00266 Aminotransferase class-V DN409_RS06810 PF08220 DeoR-like helix-turn-helix domain DN409_RS06810 PF00455 DeoR C terminal sensor domain DN409_RS06820 PF00596 Class II Aldolase and Adducin N-terminal domain DN409_RS06830 PF04748 Divergent polysaccharide deacetylase DN409_RS06835 PF09388 Spo0E like sporulation regulatory protein DN409_RS06840 PF02743 Cache domain DN409_RS06840 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS06845 PF01047 MarR family DN409_RS06855 PF12867 DinB superfamily DN409_RS06860 PF13188 PAS domain DN409_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS06860 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS06860 PF13426 PAS domain DN409_RS06860 PF00989 PAS fold DN409_RS06865 PF06508 Queuosine biosynthesis protein QueC DN409_RS06870 PF01242 6-pyruvoyl tetrahydropterin synthase DN409_RS06875 PF04055 Radical SAM superfamily DN409_RS06880 PF14489 QueF-like protein DN409_RS06885 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DN409_RS06895 PF00583 Acetyltransferase (GNAT) family DN409_RS06915 PF07972 NrdI Flavodoxin like DN409_RS06930 PF00268 Ribonucleotide reductase, small chain DN409_RS06935 PF00324 Amino acid permease DN409_RS06940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN409_RS06940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN409_RS06955 PF00072 Response regulator receiver domain DN409_RS06955 PF00158 Sigma-54 interaction domain DN409_RS06955 PF02954 Bacterial regulatory protein, Fis family DN409_RS06960 PF00171 Aldehyde dehydrogenase family DN409_RS06965 PF00202 Aminotransferase class-III DN409_RS06970 PF00392 Bacterial regulatory proteins, gntR family DN409_RS06975 PF00005 ABC transporter DN409_RS06985 PF00005 ABC transporter DN409_RS06995 PF02517 CPBP intramembrane metalloprotease DN409_RS07005 PF01037 Lrp/AsnC ligand binding domain DN409_RS07015 PF00857 Isochorismatase family DN409_RS07025 PF02016 LD-carboxypeptidase N-terminal domain DN409_RS07025 PF17676 LD-carboxypeptidase C-terminal domain DN409_RS07030 PF03060 Nitronate monooxygenase DN409_RS07035 PF04914 DltD protein DN409_RS07040 PF00550 Phosphopantetheine attachment site DN409_RS07045 PF03062 MBOAT, membrane-bound O-acyltransferase family DN409_RS07050 PF13193 AMP-binding enzyme C-terminal domain DN409_RS07050 PF00501 AMP-binding enzyme DN409_RS07060 PF01546 Peptidase family M20/M25/M40 DN409_RS07060 PF07687 Peptidase dimerisation domain DN409_RS07065 PF00258 Flavodoxin DN409_RS07090 PF01554 MatE DN409_RS07095 PF02673 Bacitracin resistance protein BacA DN409_RS07110 PF01047 MarR family DN409_RS07120 PF00375 Sodium:dicarboxylate symporter family DN409_RS07125 PF02386 Cation transport protein DN409_RS07135 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN409_RS07145 PF03698 Uncharacterised protein family (UPF0180) DN409_RS07155 PF01063 Amino-transferase class IV DN409_RS07160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_RS07160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_RS07160 PF00205 Thiamine pyrophosphate enzyme, central domain DN409_RS07165 PF10369 Small subunit of acetolactate synthase DN409_RS07165 PF01842 ACT domain DN409_RS07170 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN409_RS07170 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN409_RS07175 PF00682 HMGL-like DN409_RS07175 PF08502 LeuA allosteric (dimerisation) domain DN409_RS07180 PF00180 Isocitrate/isopropylmalate dehydrogenase DN409_RS07185 PF00330 Aconitase family (aconitate hydratase) DN409_RS07190 PF00694 Aconitase C-terminal domain DN409_RS07195 PF13393 Histidyl-tRNA synthetase DN409_RS07200 PF01634 ATP phosphoribosyltransferase DN409_RS07205 PF00815 Histidinol dehydrogenase DN409_RS07210 PF00475 Imidazoleglycerol-phosphate dehydratase DN409_RS07215 PF00117 Glutamine amidotransferase class-I DN409_RS07220 PF00977 Histidine biosynthesis protein DN409_RS07225 PF00977 Histidine biosynthesis protein DN409_RS07230 PF01502 Phosphoribosyl-AMP cyclohydrolase DN409_RS07235 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DN409_RS07240 PF02811 PHP domain DN409_RS07250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN409_RS07250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN409_RS07255 PF01066 CDP-alcohol phosphatidyltransferase DN409_RS07260 PF00884 Sulfatase DN409_RS07270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DN409_RS07270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN409_RS07280 PF01507 Phosphoadenosine phosphosulfate reductase family DN409_RS07285 PF14306 PUA-like domain DN409_RS07285 PF01747 ATP-sulfurylase DN409_RS07295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN409_RS07295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN409_RS07305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN409_RS07310 PF01903 CbiX DN409_RS07320 PF00209 Sodium:neurotransmitter symporter family DN409_RS07330 PF00375 Sodium:dicarboxylate symporter family DN409_RS07340 PF03553 Na+/H+ antiporter family DN409_RS07360 PF09922 Cell wall-active antibiotics response 4TMS YvqF DN409_RS07365 PF07730 Histidine kinase DN409_RS07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS07365 PF00672 HAMP domain DN409_RS07370 PF00072 Response regulator receiver domain DN409_RS07370 PF00196 Bacterial regulatory proteins, luxR family DN409_RS07380 PF05525 Branched-chain amino acid transport protein DN409_RS07390 PF08241 Methyltransferase domain DN409_RS07420 PF00042 Globin DN409_RS07420 PF00175 Oxidoreductase NAD-binding domain DN409_RS07420 PF00970 Oxidoreductase FAD-binding domain DN409_RS07435 PF01925 Sulfite exporter TauE/SafE DN409_RS07440 PF01384 Phosphate transporter family DN409_RS07445 PF01865 Protein of unknown function DUF47 DN409_RS07450 PF00905 Penicillin binding protein transpeptidase domain DN409_RS07450 PF00912 Transglycosylase DN409_RS07465 PF00989 PAS fold DN409_RS07465 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS07465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS07470 PF01904 Protein of unknown function DUF72 DN409_RS07480 PF00589 Phage integrase family DN409_RS07485 PF00989 PAS fold DN409_RS07485 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS07485 PF16736 Single Cache-like DN409_RS07490 PF01048 Phosphorylase superfamily DN409_RS07500 PF09924 Uncharacterised conserved protein (DUF2156) DN409_RS07500 PF03706 Lysylphosphatidylglycerol synthase TM region DN409_RS07515 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN409_RS07515 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN409_RS07520 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_RS07520 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_RS07525 PF07670 Nucleoside recognition DN409_RS07530 PF07670 Nucleoside recognition DN409_RS07535 PF00849 RNA pseudouridylate synthase DN409_RS07535 PF01479 S4 domain DN409_RS07540 PF00578 AhpC/TSA family DN409_RS07545 PF05140 ResB-like family DN409_RS07550 PF01578 Cytochrome C assembly protein DN409_RS07555 PF00486 Transcriptional regulatory protein, C terminal DN409_RS07555 PF00072 Response regulator receiver domain DN409_RS07560 PF00672 HAMP domain DN409_RS07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS07560 PF00989 PAS fold DN409_RS07560 PF18698 Histidine kinase sensor domain DN409_RS07560 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS07565 PF01923 Cobalamin adenosyltransferase DN409_RS07570 PF01551 Peptidase family M23 DN409_RS07580 PF12822 ECF transporter, substrate-specific component DN409_RS07595 PF14493 Helix-turn-helix domain DN409_RS07600 PF00271 Helicase conserved C-terminal domain DN409_RS07600 PF00270 DEAD/DEAH box helicase DN409_RS07605 PF02517 CPBP intramembrane metalloprotease DN409_RS07615 PF00149 Calcineurin-like phosphoesterase DN409_RS07620 PF02310 B12 binding domain DN409_RS07620 PF13411 MerR HTH family regulatory protein DN409_RS07620 PF02607 B12 binding domain DN409_RS07625 PF05389 Negative regulator of genetic competence (MecA) DN409_RS07630 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN409_RS07630 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN409_RS07655 PF17763 Glutaminase/Asparaginase C-terminal domain DN409_RS07655 PF00710 Asparaginase, N-terminal DN409_RS07660 PF02224 Cytidylate kinase DN409_RS07665 PF00575 S1 RNA binding domain DN409_RS07670 PF01070 FMN-dependent dehydrogenase DN409_RS07680 PF14140 YpzI-like protein DN409_RS07690 PF14045 YIEGIA protein DN409_RS07700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DN409_RS07700 PF01926 50S ribosome-binding GTPase DN409_RS07705 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DN409_RS07705 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DN409_RS07715 PF10966 Protein of unknown function (DUF2768) DN409_RS07725 PF09547 Stage IV sporulation protein A (spore_IV_A) DN409_RS07730 PF00216 Bacterial DNA-binding protein DN409_RS07735 PF01227 GTP cyclohydrolase I DN409_RS07740 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DN409_RS07745 PF01209 ubiE/COQ5 methyltransferase family DN409_RS07750 PF00348 Polyprenyl synthetase DN409_RS07755 PF00334 Nucleoside diphosphate kinase DN409_RS07760 PF01264 Chorismate synthase DN409_RS07765 PF01761 3-dehydroquinate synthase DN409_RS07770 PF00155 Aminotransferase class I and II DN409_RS07775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN409_RS07785 PF08864 UPF0302 domain DN409_RS07785 PF08858 IDEAL domain DN409_RS07790 PF10673 Protein of unknown function (DUF2487) DN409_RS07795 PF00355 Rieske [2Fe-2S] domain DN409_RS07800 PF00033 Cytochrome b/b6/petB DN409_RS07805 PF00032 Cytochrome b(C-terminal)/b6/petD DN409_RS07805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN409_RS07815 PF07187 Protein of unknown function (DUF1405) DN409_RS07825 PF09577 Sporulation protein YpjB (SpoYpjB) DN409_RS07830 PF04298 Putative neutral zinc metallopeptidase DN409_RS07840 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_RS07840 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS07845 PF03819 MazG nucleotide pyrophosphohydrolase domain DN409_RS07850 PF05173 Dihydrodipicolinate reductase, C-terminus DN409_RS07850 PF01113 Dihydrodipicolinate reductase, N-terminus DN409_RS07855 PF02142 MGS-like domain DN409_RS07860 PF02585 GlcNAc-PI de-N-acetylase DN409_RS07865 PF00534 Glycosyl transferases group 1 DN409_RS07865 PF13439 Glycosyltransferase Family 4 DN409_RS07870 PF12627 Probable RNA and SrmB- binding site of polymerase A DN409_RS07870 PF01743 Poly A polymerase head domain DN409_RS07870 PF13735 tRNA nucleotidyltransferase domain 2 putative DN409_RS07875 PF02237 Biotin protein ligase C terminal domain DN409_RS07875 PF03099 Biotin/lipoate A/B protein ligase family DN409_RS07875 PF08279 HTH domain DN409_RS07880 PF02548 Ketopantoate hydroxymethyltransferase DN409_RS07885 PF02569 Pantoate-beta-alanine ligase DN409_RS07890 PF02261 Aspartate decarboxylase DN409_RS07895 PF13307 Helicase C-terminal domain DN409_RS07895 PF00929 Exonuclease DN409_RS07895 PF04851 Type III restriction enzyme, res subunit DN409_RS07900 PF14084 Protein of unknown function (DUF4264) DN409_RS07910 PF00155 Aminotransferase class I and II DN409_RS07915 PF07261 Replication initiation and membrane attachment DN409_RS07920 PF00730 HhH-GPD superfamily base excision DNA repair protein DN409_RS07920 PF10576 Iron-sulfur binding domain of endonuclease III DN409_RS07920 PF00633 Helix-hairpin-helix motif DN409_RS07930 PF00912 Transglycosylase DN409_RS07930 PF00905 Penicillin binding protein transpeptidase domain DN409_RS07935 PF03838 Recombination protein U DN409_RS07940 PF10720 Protein of unknown function (DUF2515) DN409_RS07970 PF06908 YspA SLOG family DN409_RS07975 PF05103 DivIVA protein DN409_RS07985 PF01170 Putative RNA methylase family UPF0020 DN409_RS07985 PF02926 THUMP domain DN409_RS07995 PF13307 Helicase C-terminal domain DN409_RS08000 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DN409_RS08010 PF00557 Metallopeptidase family M24 DN409_RS08020 PF00156 Phosphoribosyl transferase domain DN409_RS08025 PF00860 Permease family DN409_RS08030 PF04235 Protein of unknown function (DUF418) DN409_RS08035 PF00350 Dynamin family DN409_RS08045 PF00583 Acetyltransferase (GNAT) family DN409_RS08050 PF10752 Protein of unknown function (DUF2533) DN409_RS08055 PF00581 Rhodanese-like domain DN409_RS08090 PF00689 Cation transporting ATPase, C-terminus DN409_RS08090 PF00690 Cation transporter/ATPase, N-terminus DN409_RS08095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN409_RS08095 PF01367 5'-3' exonuclease, C-terminal SAM fold DN409_RS08110 PF18014 Acetyltransferase (GNAT) domain DN409_RS08110 PF13673 Acetyltransferase (GNAT) domain DN409_RS08130 PF13456 Reverse transcriptase-like DN409_RS08135 PF01263 Aldose 1-epimerase DN409_RS08150 PF10782 Zinc-finger DN409_RS08160 PF00313 'Cold-shock' DNA-binding domain DN409_RS08165 PF08892 YqcI/YcgG family DN409_RS08170 PF01810 LysE type translocator DN409_RS08185 PF04341 Protein of unknown function, DUF485 DN409_RS08190 PF00474 Sodium:solute symporter family DN409_RS08195 PF00202 Aminotransferase class-III DN409_RS08205 PF00999 Sodium/hydrogen exchanger family DN409_RS08210 PF06445 GyrI-like small molecule binding domain DN409_RS08210 PF13411 MerR HTH family regulatory protein DN409_RS08220 PF04239 Protein of unknown function (DUF421) DN409_RS08225 PF02698 DUF218 domain DN409_RS08235 PF00881 Nitroreductase family DN409_RS08285 PF17209 Hfq protein DN409_RS08295 PF01618 MotA/TolQ/ExbB proton channel family DN409_RS08300 PF00691 OmpA family DN409_RS08300 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN409_RS08305 PF00072 Response regulator receiver domain DN409_RS08310 PF02895 Signal transducing histidine kinase, homodimeric domain DN409_RS08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS08310 PF01627 Hpt domain DN409_RS08310 PF07194 P2 response regulator binding domain DN409_RS08310 PF01584 CheW-like domain DN409_RS08315 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN409_RS08315 PF04509 CheC-like family DN409_RS08330 PF01739 CheR methyltransferase, SAM binding domain DN409_RS08330 PF03705 CheR methyltransferase, all-alpha domain DN409_RS08350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN409_RS08350 PF00460 Flagella basal body rod protein DN409_RS08355 PF00700 Bacterial flagellin C-terminal helical region DN409_RS08355 PF00669 Bacterial flagellin N-terminal helical region DN409_RS08380 PF00460 Flagella basal body rod protein DN409_RS08385 PF00460 Flagella basal body rod protein DN409_RS08385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN409_RS08390 PF02049 Flagellar hook-basal body complex protein FliE DN409_RS08395 PF01514 Secretory protein of YscJ/FliF family DN409_RS08395 PF08345 Flagellar M-ring protein C-terminal DN409_RS08400 PF01706 FliG C-terminal domain DN409_RS08400 PF14842 FliG N-terminal domain DN409_RS08400 PF14841 FliG middle domain DN409_RS08410 PF18269 T3SS EscN ATPase C-terminal domain DN409_RS08410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN409_RS08410 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN409_RS08430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN409_RS08430 PF07559 Flagellar basal body protein FlaE DN409_RS08430 PF00460 Flagella basal body rod protein DN409_RS08445 PF01584 CheW-like domain DN409_RS08445 PF00072 Response regulator receiver domain DN409_RS08450 PF12181 DNA binding domain of the motility gene repressor (MogR) DN409_RS08455 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_RS08455 PF00395 S-layer homology domain DN409_RS08460 PF03707 Bacterial signalling protein N terminal repeat DN409_RS08460 PF00563 EAL domain DN409_RS08460 PF00990 Diguanylate cyclase, GGDEF domain DN409_RS08465 PF03741 Integral membrane protein TerC family DN409_RS08475 PF00384 Molybdopterin oxidoreductase DN409_RS08475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN409_RS08475 PF00037 4Fe-4S binding domain DN409_RS08475 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN409_RS08475 PF01568 Molydopterin dinucleotide binding domain DN409_RS08480 PF07849 Protein of unknown function (DUF1641) DN409_RS08485 PF10057 Uncharacterized conserved protein (DUF2294) DN409_RS08490 PF02634 FdhD/NarQ family DN409_RS08495 PF04055 Radical SAM superfamily DN409_RS08495 PF06463 Molybdenum Cofactor Synthesis C DN409_RS08500 PF01226 Formate/nitrite transporter DN409_RS08505 PF00899 ThiF family DN409_RS08510 PF03453 MoeA N-terminal region (domain I and II) DN409_RS08510 PF03454 MoeA C-terminal region (domain IV) DN409_RS08510 PF00994 Probable molybdopterin binding domain DN409_RS08515 PF02391 MoaE protein DN409_RS08520 PF02597 ThiS family DN409_RS08525 PF01967 MoaC family DN409_RS08530 PF10609 NUBPL iron-transfer P-loop NTPase DN409_RS08535 PF00700 Bacterial flagellin C-terminal helical region DN409_RS08535 PF00669 Bacterial flagellin N-terminal helical region DN409_RS08540 PF07196 Flagellin hook IN motif DN409_RS08540 PF00700 Bacterial flagellin C-terminal helical region DN409_RS08540 PF00669 Bacterial flagellin N-terminal helical region DN409_RS08545 PF01464 Transglycosylase SLT domain DN409_RS08555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN409_RS08555 PF02154 Flagellar motor switch protein FliM DN409_RS08560 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN409_RS08560 PF04509 CheC-like family DN409_RS08570 PF00813 FliP family DN409_RS08575 PF01313 Bacterial export proteins, family 3 DN409_RS08585 PF01312 FlhB HrpN YscU SpaS Family DN409_RS08590 PF00771 FHIPEP family DN409_RS08595 PF00448 SRP54-type protein, GTPase domain DN409_RS08600 PF00460 Flagella basal body rod protein DN409_RS08600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN409_RS08605 PF00296 Luciferase-like monooxygenase DN409_RS08635 PF03992 Antibiotic biosynthesis monooxygenase DN409_RS08640 PF08141 Small acid-soluble spore protein H family DN409_RS08650 PF07690 Major Facilitator Superfamily DN409_RS08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS08660 PF03466 LysR substrate binding domain DN409_RS08665 PF08402 TOBE domain DN409_RS08665 PF00005 ABC transporter DN409_RS08675 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS08690 PF10787 Uncharacterised protein from bacillus cereus group DN409_RS08725 PF00561 alpha/beta hydrolase fold DN409_RS08745 PF13537 Glutamine amidotransferase domain DN409_RS08745 PF00733 Asparagine synthase DN409_RS08765 PF16916 Dimerisation domain of Zinc Transporter DN409_RS08765 PF01545 Cation efflux family DN409_RS08775 PF00392 Bacterial regulatory proteins, gntR family DN409_RS08775 PF07729 FCD domain DN409_RS08780 PF00892 EamA-like transporter family DN409_RS08785 PF00535 Glycosyl transferase family 2 DN409_RS08790 PF03553 Na+/H+ antiporter family DN409_RS08795 PF00206 Lyase DN409_RS08795 PF10415 Fumarase C C-terminus DN409_RS08830 PF01554 MatE DN409_RS08835 PF03575 Peptidase family S51 DN409_RS08855 PF02683 Cytochrome C biogenesis protein transmembrane region DN409_RS08860 PF00578 AhpC/TSA family DN409_RS08875 PF00291 Pyridoxal-phosphate dependent enzyme DN409_RS08880 PF04286 Protein of unknown function (DUF445) DN409_RS08910 PF00072 Response regulator receiver domain DN409_RS08910 PF00196 Bacterial regulatory proteins, luxR family DN409_RS08915 PF13492 GAF domain DN409_RS08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS08915 PF07730 Histidine kinase DN409_RS08915 PF13185 GAF domain DN409_RS08920 PF00005 ABC transporter DN409_RS08940 PF13091 PLD-like domain DN409_RS08945 PF00696 Amino acid kinase family DN409_RS08950 PF00375 Sodium:dicarboxylate symporter family DN409_RS08955 PF10415 Fumarase C C-terminus DN409_RS08955 PF00206 Lyase DN409_RS08960 PF00390 Malic enzyme, N-terminal domain DN409_RS08960 PF03949 Malic enzyme, NAD binding domain DN409_RS08965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS08970 PF08664 YcbB domain DN409_RS08970 PF00072 Response regulator receiver domain DN409_RS08975 PF01047 MarR family DN409_RS08980 PF07690 Major Facilitator Superfamily DN409_RS08985 PF00271 Helicase conserved C-terminal domain DN409_RS08985 PF00176 SNF2 family N-terminal domain DN409_RS08985 PF04434 SWIM zinc finger DN409_RS08995 PF03590 Aspartate-ammonia ligase DN409_RS09000 PF01381 Helix-turn-helix DN409_RS09010 PF13840 ACT domain DN409_RS09010 PF00696 Amino acid kinase family DN409_RS09025 PF13761 Domain of unknown function (DUF4166) DN409_RS09030 PF14158 YndJ-like protein DN409_RS09035 PF00293 NUDIX domain DN409_RS09040 PF00395 S-layer homology domain DN409_RS09040 PF02368 Bacterial Ig-like domain (group 2) DN409_RS09050 PF07690 Major Facilitator Superfamily DN409_RS09070 PF03976 Polyphosphate kinase 2 (PPK2) DN409_RS09080 PF07690 Major Facilitator Superfamily DN409_RS09090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN409_RS09090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN409_RS09100 PF01926 50S ribosome-binding GTPase DN409_RS09100 PF16360 GTP-binding GTPase Middle Region DN409_RS09100 PF13167 GTP-binding GTPase N-terminal DN409_RS09105 PF07690 Major Facilitator Superfamily DN409_RS09110 PF00291 Pyridoxal-phosphate dependent enzyme DN409_RS09125 PF01943 Polysaccharide biosynthesis protein DN409_RS09125 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_RS09130 PF00209 Sodium:neurotransmitter symporter family DN409_RS09135 PF00457 Glycosyl hydrolases family 11 DN409_RS09135 PF03422 Carbohydrate binding module (family 6) DN409_RS09135 PF01522 Polysaccharide deacetylase DN409_RS09145 PF04239 Protein of unknown function (DUF421) DN409_RS09165 PF01625 Peptide methionine sulfoxide reductase DN409_RS09170 PF07731 Multicopper oxidase DN409_RS09170 PF07732 Multicopper oxidase DN409_RS09170 PF00394 Multicopper oxidase DN409_RS09180 PF13426 PAS domain DN409_RS09180 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS09180 PF00672 HAMP domain DN409_RS09185 PF00072 Response regulator receiver domain DN409_RS09185 PF00486 Transcriptional regulatory protein, C terminal DN409_RS09195 PF00920 Dehydratase family DN409_RS09200 PF00291 Pyridoxal-phosphate dependent enzyme DN409_RS09200 PF00585 C-terminal regulatory domain of Threonine dehydratase DN409_RS09210 PF09587 Bacterial capsule synthesis protein PGA_cap DN409_RS09225 PF07690 Major Facilitator Superfamily DN409_RS09230 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DN409_RS09260 PF01979 Amidohydrolase family DN409_RS09285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS09320 PF13302 Acetyltransferase (GNAT) domain DN409_RS09325 PF00072 Response regulator receiver domain DN409_RS09325 PF00486 Transcriptional regulatory protein, C terminal DN409_RS09330 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS09340 PF01566 Natural resistance-associated macrophage protein DN409_RS09345 PF12368 Rhodanase C-terminal DN409_RS09345 PF00581 Rhodanese-like domain DN409_RS09345 PF17773 UPF0176 acylphosphatase like domain DN409_RS09355 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN409_RS09355 PF02558 Ketopantoate reductase PanE/ApbA DN409_RS09360 PF13520 Amino acid permease DN409_RS09370 PF05791 Bacillus haemolytic enterotoxin (HBL) DN409_RS09375 PF05791 Bacillus haemolytic enterotoxin (HBL) DN409_RS09395 PF02627 Carboxymuconolactone decarboxylase family DN409_RS09400 PF13302 Acetyltransferase (GNAT) domain DN409_RS09415 PF04198 Putative sugar-binding domain DN409_RS09425 PF01791 DeoC/LacD family aldolase DN409_RS09430 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_RS09430 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_RS09435 PF02885 Glycosyl transferase family, helical bundle domain DN409_RS09435 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN409_RS09435 PF00591 Glycosyl transferase family, a/b domain DN409_RS09440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN409_RS09450 PF07301 Protein of unknown function (DUF1453) DN409_RS09455 PF05979 Bacterial protein of unknown function (DUF896) DN409_RS09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS09470 PF03466 LysR substrate binding domain DN409_RS09490 PF00557 Metallopeptidase family M24 DN409_RS09490 PF05195 Aminopeptidase P, N-terminal domain DN409_RS09495 PF00394 Multicopper oxidase DN409_RS09495 PF07731 Multicopper oxidase DN409_RS09495 PF07732 Multicopper oxidase DN409_RS09510 PF01396 Topoisomerase DNA binding C4 zinc finger DN409_RS09510 PF13342 C-terminal repeat of topoisomerase DN409_RS09510 PF01131 DNA topoisomerase DN409_RS09510 PF01751 Toprim domain DN409_RS09520 PF03466 LysR substrate binding domain DN409_RS09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS09535 PF02525 Flavodoxin-like fold DN409_RS09540 PF05525 Branched-chain amino acid transport protein DN409_RS09555 PF01648 4'-phosphopantetheinyl transferase superfamily DN409_RS09560 PF11954 Domain of unknown function (DUF3471) DN409_RS09560 PF00144 Beta-lactamase DN409_RS09570 PF00975 Thioesterase domain DN409_RS09575 PF00975 Thioesterase domain DN409_RS09575 PF13193 AMP-binding enzyme C-terminal domain DN409_RS09575 PF00668 Condensation domain DN409_RS09575 PF00501 AMP-binding enzyme DN409_RS09575 PF00550 Phosphopantetheine attachment site DN409_RS09580 PF00109 Beta-ketoacyl synthase, N-terminal domain DN409_RS09580 PF00550 Phosphopantetheine attachment site DN409_RS09580 PF02801 Beta-ketoacyl synthase, C-terminal domain DN409_RS09580 PF16197 Ketoacyl-synthetase C-terminal extension DN409_RS09580 PF00668 Condensation domain DN409_RS09580 PF00698 Acyl transferase domain DN409_RS09585 PF00501 AMP-binding enzyme DN409_RS09585 PF13193 AMP-binding enzyme C-terminal domain DN409_RS09585 PF00550 Phosphopantetheine attachment site DN409_RS09585 PF00668 Condensation domain DN409_RS09590 PF00005 ABC transporter DN409_RS09590 PF00664 ABC transporter transmembrane region DN409_RS09595 PF00668 Condensation domain DN409_RS09595 PF13193 AMP-binding enzyme C-terminal domain DN409_RS09595 PF00501 AMP-binding enzyme DN409_RS09595 PF00550 Phosphopantetheine attachment site DN409_RS09605 PF05425 Copper resistance protein D DN409_RS09605 PF13115 YtkA-like DN409_RS09605 PF04234 CopC domain DN409_RS09610 PF07987 Domain of unkown function (DUF1775) DN409_RS09620 PF00892 EamA-like transporter family DN409_RS09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS09625 PF03466 LysR substrate binding domain DN409_RS09630 PF02082 Transcriptional regulator DN409_RS09635 PF01323 DSBA-like thioredoxin domain DN409_RS09640 PF00881 Nitroreductase family DN409_RS09650 PF01425 Amidase DN409_RS09655 PF01594 AI-2E family transporter DN409_RS09665 PF00056 lactate/malate dehydrogenase, NAD binding domain DN409_RS09665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN409_RS09670 PF01593 Flavin containing amine oxidoreductase DN409_RS09675 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN409_RS09675 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN409_RS09685 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN409_RS09685 PF00005 ABC transporter DN409_RS09690 PF00005 ABC transporter DN409_RS09695 PF02653 Branched-chain amino acid transport system / permease component DN409_RS09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS09705 PF03466 LysR substrate binding domain DN409_RS09715 PF14552 Tautomerase enzyme DN409_RS09725 PF01047 MarR family DN409_RS09730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS09740 PF01654 Cytochrome bd terminal oxidase subunit I DN409_RS09745 PF02322 Cytochrome bd terminal oxidase subunit II DN409_RS09750 PF00664 ABC transporter transmembrane region DN409_RS09750 PF00005 ABC transporter DN409_RS09755 PF00664 ABC transporter transmembrane region DN409_RS09755 PF00005 ABC transporter DN409_RS09780 PF17676 LD-carboxypeptidase C-terminal domain DN409_RS09780 PF02016 LD-carboxypeptidase N-terminal domain DN409_RS09785 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_RS09785 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_RS09800 PF01476 LysM domain DN409_RS09800 PF00877 NlpC/P60 family DN409_RS09810 PF00664 ABC transporter transmembrane region DN409_RS09810 PF00005 ABC transporter DN409_RS09815 PF00486 Transcriptional regulatory protein, C terminal DN409_RS09815 PF00072 Response regulator receiver domain DN409_RS09820 PF16736 Single Cache-like DN409_RS09820 PF00989 PAS fold DN409_RS09820 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS09825 PF00106 short chain dehydrogenase DN409_RS09830 PF01596 O-methyltransferase DN409_RS09835 PF04439 Streptomycin adenylyltransferase DN409_RS09840 PF01522 Polysaccharide deacetylase DN409_RS09845 PF13630 SdpI/YhfL protein family DN409_RS09865 PF00742 Homoserine dehydrogenase DN409_RS09865 PF03447 Homoserine dehydrogenase, NAD binding domain DN409_RS09865 PF01842 ACT domain DN409_RS09870 PF00291 Pyridoxal-phosphate dependent enzyme DN409_RS09875 PF00288 GHMP kinases N terminal domain DN409_RS09875 PF08544 GHMP kinases C terminal DN409_RS09890 PF03816 Cell envelope-related transcriptional attenuator domain DN409_RS09900 PF00072 Response regulator receiver domain DN409_RS09900 PF00486 Transcriptional regulatory protein, C terminal DN409_RS09905 PF16736 Single Cache-like DN409_RS09905 PF00989 PAS fold DN409_RS09905 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS09905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS09910 PF01522 Polysaccharide deacetylase DN409_RS09925 PF07282 Putative transposase DNA-binding domain DN409_RS09925 PF12323 Helix-turn-helix domain DN409_RS09925 PF01385 Probable transposase DN409_RS09930 PF02308 MgtC family DN409_RS09935 PF00583 Acetyltransferase (GNAT) family DN409_RS09940 PF06276 Ferric iron reductase FhuF-like transporter DN409_RS09940 PF04183 IucA / IucC family DN409_RS09945 PF06276 Ferric iron reductase FhuF-like transporter DN409_RS09945 PF04183 IucA / IucC family DN409_RS09950 PF00501 AMP-binding enzyme DN409_RS09950 PF13193 AMP-binding enzyme C-terminal domain DN409_RS09965 PF01261 Xylose isomerase-like TIM barrel DN409_RS09970 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_RS09975 PF07690 Major Facilitator Superfamily DN409_RS09980 PF01810 LysE type translocator DN409_RS09985 PF00392 Bacterial regulatory proteins, gntR family DN409_RS09985 PF00155 Aminotransferase class I and II DN409_RS09995 PF01734 Patatin-like phospholipase DN409_RS10020 PF00293 NUDIX domain DN409_RS10020 PF13344 Haloacid dehalogenase-like hydrolase DN409_RS10025 PF02540 NAD synthase DN409_RS10030 PF02687 FtsX-like permease family DN409_RS10035 PF18277 AbrB C-terminal domain DN409_RS10035 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_RS10040 PF00082 Subtilase family DN409_RS10050 PF03459 TOBE domain DN409_RS10050 PF17912 MalK OB fold domain DN409_RS10050 PF00005 ABC transporter DN409_RS10055 PF13556 PucR C-terminal helix-turn-helix domain DN409_RS10060 PF12833 Helix-turn-helix domain DN409_RS10065 PF01547 Bacterial extracellular solute-binding protein DN409_RS10070 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS10075 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS10080 PF17386 Lacto-N-biose phosphorylase C-terminal domain DN409_RS10080 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain DN409_RS10080 PF17385 Lacto-N-biose phosphorylase central domain DN409_RS10085 PF00480 ROK family DN409_RS10090 PF01380 SIS domain DN409_RS10095 PF01979 Amidohydrolase family DN409_RS10100 PF00294 pfkB family carbohydrate kinase DN409_RS10105 PF01791 DeoC/LacD family aldolase DN409_RS10110 PF04650 YSIRK type signal peptide DN409_RS10110 PF12905 Endo-alpha-N-acetylgalactosaminidase DN409_RS10110 PF17451 Glycosyl hydrolase 101 beta sandwich domain DN409_RS10110 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal DN409_RS10110 PF18080 Galactose mutarotase-like fold domain DN409_RS10110 PF00754 F5/8 type C domain DN409_RS10110 PF17974 Galactose-binding domain-like DN409_RS10120 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DN409_RS10120 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DN409_RS10125 PF01022 Bacterial regulatory protein, arsR family DN409_RS10130 PF00248 Aldo/keto reductase family DN409_RS10135 PF07690 Major Facilitator Superfamily DN409_RS10160 PF03193 RsgA GTPase DN409_RS10165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS10165 PF02743 Cache domain DN409_RS10165 PF00672 HAMP domain DN409_RS10185 PF00210 Ferritin-like domain DN409_RS10200 PF00296 Luciferase-like monooxygenase DN409_RS10210 PF01593 Flavin containing amine oxidoreductase DN409_RS10215 PF13302 Acetyltransferase (GNAT) domain DN409_RS10220 PF00248 Aldo/keto reductase family DN409_RS10225 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN409_RS10225 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN409_RS10230 PF00583 Acetyltransferase (GNAT) family DN409_RS10235 PF01297 Zinc-uptake complex component A periplasmic DN409_RS10250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN409_RS10255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN409_RS10255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN409_RS10265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS10270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS10280 PF00300 Histidine phosphatase superfamily (branch 1) DN409_RS10290 PF08757 CotH kinase protein DN409_RS10295 PF00293 NUDIX domain DN409_RS10300 PF09335 SNARE associated Golgi protein DN409_RS10305 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_RS10305 PF01943 Polysaccharide biosynthesis protein DN409_RS10315 PF03773 Predicted permease DN409_RS10320 PF09323 Domain of unknown function (DUF1980) DN409_RS10325 PF03061 Thioesterase superfamily DN409_RS10335 PF13091 PLD-like domain DN409_RS10350 PF13460 NAD(P)H-binding DN409_RS10355 PF04306 Protein of unknown function (DUF456) DN409_RS10360 PF01595 Cyclin M transmembrane N-terminal domain DN409_RS10360 PF03471 Transporter associated domain DN409_RS10360 PF00571 CBS domain DN409_RS10385 PF05525 Branched-chain amino acid transport protein DN409_RS10390 PF01588 Putative tRNA binding domain DN409_RS10410 PF07454 Stage II sporulation protein P (SpoIIP) DN409_RS10425 PF02557 D-alanyl-D-alanine carboxypeptidase DN409_RS10430 PF00293 NUDIX domain DN409_RS10435 PF01425 Amidase DN409_RS10450 PF01145 SPFH domain / Band 7 family DN409_RS10455 PF07454 Stage II sporulation protein P (SpoIIP) DN409_RS10460 PF00300 Histidine phosphatase superfamily (branch 1) DN409_RS10470 PF01047 MarR family DN409_RS10475 PF07690 Major Facilitator Superfamily DN409_RS10485 PF00842 Alanine racemase, C-terminal domain DN409_RS10485 PF01168 Alanine racemase, N-terminal domain DN409_RS10490 PF13847 Methyltransferase domain DN409_RS10505 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN409_RS10510 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_RS10510 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS10515 PF00392 Bacterial regulatory proteins, gntR family DN409_RS10515 PF00155 Aminotransferase class I and II DN409_RS10540 PF00583 Acetyltransferase (GNAT) family DN409_RS10560 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN409_RS10585 PF01209 ubiE/COQ5 methyltransferase family DN409_RS10590 PF01268 Formate--tetrahydrofolate ligase DN409_RS10600 PF00270 DEAD/DEAH box helicase DN409_RS10600 PF00271 Helicase conserved C-terminal domain DN409_RS10615 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS10615 PF00107 Zinc-binding dehydrogenase DN409_RS10620 PF08281 Sigma-70, region 4 DN409_RS10620 PF04542 Sigma-70 region 2 DN409_RS10645 PF00258 Flavodoxin DN409_RS10645 PF01613 Flavin reductase like domain DN409_RS10655 PF00255 Glutathione peroxidase DN409_RS10660 PF11992 Domain of unknown function (DUF3488) DN409_RS10660 PF01841 Transglutaminase-like superfamily DN409_RS10660 PF13559 Domain of unknown function (DUF4129) DN409_RS10665 PF01882 Protein of unknown function DUF58 DN409_RS10670 PF17863 AAA lid domain DN409_RS10670 PF07726 ATPase family associated with various cellular activities (AAA) DN409_RS10675 PF14710 Respiratory nitrate reductase alpha N-terminal DN409_RS10675 PF01568 Molydopterin dinucleotide binding domain DN409_RS10675 PF00384 Molybdopterin oxidoreductase DN409_RS10680 PF14711 Respiratory nitrate reductase beta C-terminal DN409_RS10680 PF13247 4Fe-4S dicluster domain DN409_RS10685 PF02613 Nitrate reductase delta subunit DN409_RS10690 PF02665 Nitrate reductase gamma subunit DN409_RS10695 PF00325 Bacterial regulatory proteins, crp family DN409_RS10695 PF00027 Cyclic nucleotide-binding domain DN409_RS10700 PF04055 Radical SAM superfamily DN409_RS10700 PF06463 Molybdenum Cofactor Synthesis C DN409_RS10705 PF00899 ThiF family DN409_RS10710 PF03454 MoeA C-terminal region (domain IV) DN409_RS10710 PF00994 Probable molybdopterin binding domain DN409_RS10710 PF03453 MoeA N-terminal region (domain I and II) DN409_RS10715 PF02391 MoaE protein DN409_RS10725 PF07690 Major Facilitator Superfamily DN409_RS10735 PF04909 Amidohydrolase DN409_RS10750 PF01903 CbiX DN409_RS10755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN409_RS10760 PF00355 Rieske [2Fe-2S] domain DN409_RS10765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN409_RS10765 PF04324 BFD-like [2Fe-2S] binding domain DN409_RS10765 PF18267 Rubredoxin NAD+ reductase C-terminal domain DN409_RS10765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN409_RS10765 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS10770 PF04405 Domain of Unknown function (DUF542) DN409_RS10770 PF01814 Hemerythrin HHE cation binding domain DN409_RS10795 PF04232 Stage V sporulation protein S (SpoVS) DN409_RS10805 PF01966 HD domain DN409_RS10810 PF00005 ABC transporter DN409_RS10810 PF16326 ABC transporter C-terminal domain DN409_RS10810 PF12848 ABC transporter DN409_RS10825 PF00436 Single-strand binding protein family DN409_RS10835 PF01494 FAD binding domain DN409_RS10840 PF08712 Scaffold protein Nfu/NifU N terminal DN409_RS10840 PF13769 Virulence factor DN409_RS10850 PF06491 Disulphide isomerase DN409_RS10855 PF04445 Putative SAM-dependent methyltransferase DN409_RS10860 PF03485 Arginyl tRNA synthetase N terminal domain DN409_RS10860 PF00750 tRNA synthetases class I (R) DN409_RS10860 PF05746 DALR anticodon binding domain DN409_RS10885 PF00133 tRNA synthetases class I (I, L, M and V) DN409_RS10885 PF08264 Anticodon-binding domain of tRNA DN409_RS10910 PF01336 OB-fold nucleic acid binding domain DN409_RS10910 PF00152 tRNA synthetases class II (D, K and N) DN409_RS10930 PF12538 DNA transporter DN409_RS10930 PF01580 FtsK/SpoIIIE family DN409_RS10955 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH DN409_RS10955 PF04740 LXG domain of WXG superfamily DN409_RS10975 PF00209 Sodium:neurotransmitter symporter family DN409_RS10990 PF10997 Alternate to MurJ DN409_RS10995 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS11010 PF00465 Iron-containing alcohol dehydrogenase DN409_RS11015 PF01177 Asp/Glu/Hydantoin racemase DN409_RS11020 PF01980 tRNA-methyltransferase O DN409_RS11025 PF00583 Acetyltransferase (GNAT) family DN409_RS11030 PF08645 Polynucleotide kinase 3 phosphatase DN409_RS11035 PF00005 ABC transporter DN409_RS11040 PF05975 Bacterial ABC transporter protein EcsB DN409_RS11045 PF14005 YpjP-like protein DN409_RS11050 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS11070 PF07859 alpha/beta hydrolase fold DN409_RS11080 PF12323 Helix-turn-helix domain DN409_RS11080 PF01385 Probable transposase DN409_RS11080 PF07282 Putative transposase DNA-binding domain DN409_RS11090 PF00144 Beta-lactamase DN409_RS11095 PF00303 Thymidylate synthase DN409_RS11100 PF00186 Dihydrofolate reductase DN409_RS11105 PF05223 NTF2-like N-terminal transpeptidase domain DN409_RS11105 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS11105 PF00905 Penicillin binding protein transpeptidase domain DN409_RS11110 PF02525 Flavodoxin-like fold DN409_RS11115 PF01553 Acyltransferase DN409_RS11120 PF03006 Haemolysin-III related DN409_RS11125 PF02416 mttA/Hcf106 family DN409_RS11130 PF00902 Sec-independent protein translocase protein (TatC) DN409_RS11140 PF02645 Uncharacterised protein, DegV family COG1307 DN409_RS11150 PF02630 SCO1/SenC DN409_RS11155 PF00011 Hsp20/alpha crystallin family DN409_RS11160 PF13537 Glutamine amidotransferase domain DN409_RS11160 PF00733 Asparagine synthase DN409_RS11175 PF05036 Sporulation related domain DN409_RS11175 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_RS11180 PF01497 Periplasmic binding protein DN409_RS11185 PF01063 Amino-transferase class IV DN409_RS11190 PF00881 Nitroreductase family DN409_RS11210 PF14436 Bacterial EndoU nuclease DN409_RS11210 PF04740 LXG domain of WXG superfamily DN409_RS11220 PF13610 DDE domain DN409_RS11230 PF07690 Major Facilitator Superfamily DN409_RS11235 PF01609 Transposase DDE domain DN409_RS11255 PF00857 Isochorismatase family DN409_RS11265 PF00924 Mechanosensitive ion channel DN409_RS11270 PF07730 Histidine kinase DN409_RS11270 PF13185 GAF domain DN409_RS11275 PF00072 Response regulator receiver domain DN409_RS11275 PF00196 Bacterial regulatory proteins, luxR family DN409_RS11280 PF01418 Helix-turn-helix domain, rpiR family DN409_RS11280 PF01380 SIS domain DN409_RS11285 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS11285 PF00107 Zinc-binding dehydrogenase DN409_RS11300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN409_RS11300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN409_RS11305 PF02447 GntP family permease DN409_RS11310 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN409_RS11310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN409_RS11315 PF03358 NADPH-dependent FMN reductase DN409_RS11330 PF00571 CBS domain DN409_RS11330 PF00005 ABC transporter DN409_RS11335 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS11340 PF13520 Amino acid permease DN409_RS11370 PF03471 Transporter associated domain DN409_RS11370 PF01595 Cyclin M transmembrane N-terminal domain DN409_RS11370 PF00571 CBS domain DN409_RS11375 PF00171 Aldehyde dehydrogenase family DN409_RS11380 PF07997 Protein of unknown function (DUF1694) DN409_RS11385 PF09385 Histidine kinase N terminal DN409_RS11395 PF00202 Aminotransferase class-III DN409_RS11400 PF01144 Coenzyme A transferase DN409_RS11405 PF01144 Coenzyme A transferase DN409_RS11410 PF07687 Peptidase dimerisation domain DN409_RS11410 PF01546 Peptidase family M20/M25/M40 DN409_RS11415 PF00583 Acetyltransferase (GNAT) family DN409_RS11420 PF02954 Bacterial regulatory protein, Fis family DN409_RS11420 PF13426 PAS domain DN409_RS11420 PF00158 Sigma-54 interaction domain DN409_RS11425 PF12544 Lysine-2,3-aminomutase DN409_RS11430 PF14122 YokU-like protein, putative antitoxin DN409_RS11435 PF06855 YozE SAM-like fold DN409_RS11450 PF14162 YozD-like protein DN409_RS11460 PF00069 Protein kinase domain DN409_RS11460 PF08239 Bacterial SH3 domain DN409_RS11470 PF01569 PAP2 superfamily DN409_RS11475 PF16916 Dimerisation domain of Zinc Transporter DN409_RS11475 PF01545 Cation efflux family DN409_RS11480 PF00085 Thioredoxin DN409_RS11570 PF10676 Spore germination protein gerPA/gerPF DN409_RS11600 PF00912 Transglycosylase DN409_RS11600 PF00905 Penicillin binding protein transpeptidase domain DN409_RS11610 PF07690 Major Facilitator Superfamily DN409_RS11620 PF00285 Citrate synthase, C-terminal domain DN409_RS11625 PF03972 MmgE/PrpD family DN409_RS11635 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_RS11635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_RS11635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_RS11640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN409_RS11640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN409_RS11645 PF00171 Aldehyde dehydrogenase family DN409_RS11650 PF01810 LysE type translocator DN409_RS11655 PF00378 Enoyl-CoA hydratase/isomerase DN409_RS11665 PF10763 Protein of unknown function (DUF2584) DN409_RS11670 PF12320 Type 5 capsule protein repressor C-terminal domain DN409_RS11670 PF00149 Calcineurin-like phosphoesterase DN409_RS11675 PF13476 AAA domain DN409_RS11680 PF01022 Bacterial regulatory protein, arsR family DN409_RS11690 PF07690 Major Facilitator Superfamily DN409_RS11695 PF00106 short chain dehydrogenase DN409_RS11700 PF00425 chorismate binding enzyme DN409_RS11705 PF00501 AMP-binding enzyme DN409_RS11705 PF13193 AMP-binding enzyme C-terminal domain DN409_RS11710 PF00550 Phosphopantetheine attachment site DN409_RS11710 PF00857 Isochorismatase family DN409_RS11715 PF00668 Condensation domain DN409_RS11715 PF13193 AMP-binding enzyme C-terminal domain DN409_RS11715 PF00501 AMP-binding enzyme DN409_RS11715 PF00975 Thioesterase domain DN409_RS11715 PF00550 Phosphopantetheine attachment site DN409_RS11720 PF03621 MbtH-like protein DN409_RS11725 PF07690 Major Facilitator Superfamily DN409_RS11740 PF00216 Bacterial DNA-binding protein DN409_RS11750 PF05163 DinB family DN409_RS11755 PF01235 Sodium:alanine symporter family DN409_RS11770 PF16291 Domain of unknown function (DUF4937 DN409_RS11785 PF01479 S4 domain DN409_RS11785 PF00849 RNA pseudouridylate synthase DN409_RS11790 PF03129 Anticodon binding domain DN409_RS11790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN409_RS11790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_RS11790 PF02824 TGS domain DN409_RS11795 PF13443 Cro/C1-type HTH DNA-binding domain DN409_RS11800 PF11188 Protein of unknown function (DUF2975) DN409_RS11805 PF00005 ABC transporter DN409_RS11815 PF07690 Major Facilitator Superfamily DN409_RS11830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_RS11830 PF00205 Thiamine pyrophosphate enzyme, central domain DN409_RS11830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_RS11855 PF01595 Cyclin M transmembrane N-terminal domain DN409_RS11855 PF00571 CBS domain DN409_RS11855 PF03471 Transporter associated domain DN409_RS11860 PF00753 Metallo-beta-lactamase superfamily DN409_RS11890 PF00027 Cyclic nucleotide-binding domain DN409_RS11910 PF01047 MarR family DN409_RS11925 PF00753 Metallo-beta-lactamase superfamily DN409_RS11930 PF00440 Bacterial regulatory proteins, tetR family DN409_RS11935 PF03176 MMPL family DN409_RS11945 PF00302 Chloramphenicol acetyltransferase DN409_RS11960 PF00583 Acetyltransferase (GNAT) family DN409_RS12000 PF00561 alpha/beta hydrolase fold DN409_RS12005 PF01593 Flavin containing amine oxidoreductase DN409_RS12015 PF13302 Acetyltransferase (GNAT) domain DN409_RS12025 PF00313 'Cold-shock' DNA-binding domain DN409_RS12045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS12045 PF03466 LysR substrate binding domain DN409_RS12050 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN409_RS12050 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN409_RS12110 PF03466 LysR substrate binding domain DN409_RS12110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS12115 PF00202 Aminotransferase class-III DN409_RS12120 PF03475 3-alpha domain DN409_RS12120 PF03473 MOSC domain DN409_RS12135 PF00664 ABC transporter transmembrane region DN409_RS12135 PF00005 ABC transporter DN409_RS12140 PF00005 ABC transporter DN409_RS12140 PF00664 ABC transporter transmembrane region DN409_RS12155 PF01810 LysE type translocator DN409_RS12160 PF01381 Helix-turn-helix DN409_RS12160 PF07883 Cupin domain DN409_RS12265 PF00313 'Cold-shock' DNA-binding domain DN409_RS12300 PF04607 Region found in RelA / SpoT proteins DN409_RS12300 PF13291 ACT domain DN409_RS12300 PF02824 TGS domain DN409_RS12310 PF00890 FAD binding domain DN409_RS12315 PF12680 SnoaL-like domain DN409_RS12315 PF08281 Sigma-70, region 4 DN409_RS12315 PF04542 Sigma-70 region 2 DN409_RS12320 PF01596 O-methyltransferase DN409_RS12335 PF02638 Glycosyl hydrolase-like 10 DN409_RS12345 PF02378 Phosphotransferase system, EIIC DN409_RS12355 PF03702 Anhydro-N-acetylmuramic acid kinase DN409_RS12360 PF01869 BadF/BadG/BcrA/BcrD ATPase family DN409_RS12365 PF02660 Glycerol-3-phosphate acyltransferase DN409_RS12370 PF00266 Aminotransferase class-V DN409_RS12420 PF00270 DEAD/DEAH box helicase DN409_RS12420 PF00271 Helicase conserved C-terminal domain DN409_RS12425 PF03848 Tellurite resistance protein TehB DN409_RS12425 PF09313 Domain of unknown function (DUF1971) DN409_RS12435 PF01965 DJ-1/PfpI family DN409_RS12445 PF00300 Histidine phosphatase superfamily (branch 1) DN409_RS12455 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DN409_RS12485 PF01546 Peptidase family M20/M25/M40 DN409_RS12485 PF07687 Peptidase dimerisation domain DN409_RS12490 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_RS12505 PF00005 ABC transporter DN409_RS12520 PF00486 Transcriptional regulatory protein, C terminal DN409_RS12520 PF00072 Response regulator receiver domain DN409_RS12525 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS12525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS12535 PF00005 ABC transporter DN409_RS12540 PF12704 MacB-like periplasmic core domain DN409_RS12540 PF02687 FtsX-like permease family DN409_RS12550 PF00072 Response regulator receiver domain DN409_RS12550 PF00486 Transcriptional regulatory protein, C terminal DN409_RS12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS12555 PF00989 PAS fold DN409_RS12555 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS12555 PF00672 HAMP domain DN409_RS12565 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_RS12565 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_RS12595 PF00905 Penicillin binding protein transpeptidase domain DN409_RS12595 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS12595 PF05223 NTF2-like N-terminal transpeptidase domain DN409_RS12600 PF00072 Response regulator receiver domain DN409_RS12600 PF00486 Transcriptional regulatory protein, C terminal DN409_RS12605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS12610 PF00005 ABC transporter DN409_RS12615 PF02687 FtsX-like permease family DN409_RS12625 PF04542 Sigma-70 region 2 DN409_RS12625 PF08281 Sigma-70, region 4 DN409_RS12635 PF00905 Penicillin binding protein transpeptidase domain DN409_RS12635 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS12640 PF00905 Penicillin binding protein transpeptidase domain DN409_RS12640 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS12660 PF05791 Bacillus haemolytic enterotoxin (HBL) DN409_RS12675 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS12680 PF00581 Rhodanese-like domain DN409_RS12680 PF00753 Metallo-beta-lactamase superfamily DN409_RS12695 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_RS12725 PF18416 N-acetylglucosamine binding protein domain 2 DN409_RS12725 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN409_RS12730 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DN409_RS12740 PF00149 Calcineurin-like phosphoesterase DN409_RS12750 PF00005 ABC transporter DN409_RS12760 PF08359 YsiA-like protein, C-terminal region DN409_RS12760 PF00440 Bacterial regulatory proteins, tetR family DN409_RS12770 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_RS12770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_RS12770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_RS12775 PF00289 Biotin carboxylase, N-terminal domain DN409_RS12775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN409_RS12775 PF02785 Biotin carboxylase C-terminal domain DN409_RS12780 PF00364 Biotin-requiring enzyme DN409_RS12785 PF00682 HMGL-like DN409_RS12790 PF00378 Enoyl-CoA hydratase/isomerase DN409_RS12795 PF01039 Carboxyl transferase domain DN409_RS12800 PF13193 AMP-binding enzyme C-terminal domain DN409_RS12800 PF00501 AMP-binding enzyme DN409_RS12800 PF16177 Acetyl-coenzyme A synthetase N-terminus DN409_RS12840 PF00485 Phosphoribulokinase / Uridine kinase family DN409_RS12845 PF05163 DinB family DN409_RS12850 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_RS12850 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_RS12855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS12855 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS12860 PF00072 Response regulator receiver domain DN409_RS12860 PF00486 Transcriptional regulatory protein, C terminal DN409_RS12870 PF13021 Domain of unknown function (DUF3885) DN409_RS12875 PF01048 Phosphorylase superfamily DN409_RS12900 PF17755 UvrA DNA-binding domain DN409_RS12900 PF00005 ABC transporter DN409_RS12900 PF17760 UvrA interaction domain DN409_RS12915 PF00144 Beta-lactamase DN409_RS12920 PF09278 MerR, DNA binding DN409_RS12920 PF00376 MerR family regulatory protein DN409_RS12930 PF01638 HxlR-like helix-turn-helix DN409_RS12955 PF00440 Bacterial regulatory proteins, tetR family DN409_RS12960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN409_RS12960 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS12970 PF01636 Phosphotransferase enzyme family DN409_RS12975 PF12833 Helix-turn-helix domain DN409_RS12975 PF14525 AraC-binding-like domain DN409_RS12985 PF00892 EamA-like transporter family DN409_RS12990 PF00392 Bacterial regulatory proteins, gntR family DN409_RS12990 PF00155 Aminotransferase class I and II DN409_RS13015 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS13015 PF00107 Zinc-binding dehydrogenase DN409_RS13025 PF04239 Protein of unknown function (DUF421) DN409_RS13040 PF00155 Aminotransferase class I and II DN409_RS13040 PF00392 Bacterial regulatory proteins, gntR family DN409_RS13045 PF00892 EamA-like transporter family DN409_RS13050 PF01494 FAD binding domain DN409_RS13055 PF02909 Tetracyclin repressor-like, C-terminal domain DN409_RS13055 PF00440 Bacterial regulatory proteins, tetR family DN409_RS13065 PF00344 SecY translocase DN409_RS13075 PF00149 Calcineurin-like phosphoesterase DN409_RS13075 PF02872 5'-nucleotidase, C-terminal domain DN409_RS13080 PF07504 Fungalysin/Thermolysin Propeptide Motif DN409_RS13080 PF03413 Peptidase propeptide and YPEB domain DN409_RS13080 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN409_RS13080 PF01447 Thermolysin metallopeptidase, catalytic domain DN409_RS13085 PF00128 Alpha amylase, catalytic domain DN409_RS13085 PF03714 Bacterial pullanase-associated domain DN409_RS13085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN409_RS13095 PF01569 PAP2 superfamily DN409_RS13115 PF12704 MacB-like periplasmic core domain DN409_RS13115 PF02687 FtsX-like permease family DN409_RS13120 PF00005 ABC transporter DN409_RS13125 PF03845 Spore germination protein DN409_RS13130 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_RS13135 PF05504 Spore germination B3/ GerAC like, C-terminal DN409_RS13150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS13150 PF00989 PAS fold DN409_RS13150 PF16736 Single Cache-like DN409_RS13150 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS13155 PF00486 Transcriptional regulatory protein, C terminal DN409_RS13155 PF00072 Response regulator receiver domain DN409_RS13160 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS13185 PF01266 FAD dependent oxidoreductase DN409_RS13190 PF01066 CDP-alcohol phosphatidyltransferase DN409_RS13200 PF00664 ABC transporter transmembrane region DN409_RS13200 PF00005 ABC transporter DN409_RS13205 PF00664 ABC transporter transmembrane region DN409_RS13205 PF00005 ABC transporter DN409_RS13215 PF00205 Thiamine pyrophosphate enzyme, central domain DN409_RS13215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_RS13215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_RS13235 PF01541 GIY-YIG catalytic domain DN409_RS13245 PF02673 Bacitracin resistance protein BacA DN409_RS13260 PF12867 DinB superfamily DN409_RS13270 PF08000 Bacterial PH domain DN409_RS13275 PF01734 Patatin-like phospholipase DN409_RS13300 PF09234 Domain of unknown function (DUF1963) DN409_RS13315 PF12706 Beta-lactamase superfamily domain DN409_RS13325 PF00293 NUDIX domain DN409_RS13330 PF00712 DNA polymerase III beta subunit, N-terminal domain DN409_RS13330 PF02768 DNA polymerase III beta subunit, C-terminal domain DN409_RS13330 PF02767 DNA polymerase III beta subunit, central domain DN409_RS13335 PF09297 NADH pyrophosphatase zinc ribbon domain DN409_RS13335 PF00293 NUDIX domain DN409_RS13345 PF07690 Major Facilitator Superfamily DN409_RS13350 PF00144 Beta-lactamase DN409_RS13360 PF00293 NUDIX domain DN409_RS13380 PF00892 EamA-like transporter family DN409_RS13395 PF03009 Glycerophosphoryl diester phosphodiesterase family DN409_RS13410 PF01638 HxlR-like helix-turn-helix DN409_RS13420 PF07690 Major Facilitator Superfamily DN409_RS13440 PF00005 ABC transporter DN409_RS13440 PF00664 ABC transporter transmembrane region DN409_RS13470 PF00905 Penicillin binding protein transpeptidase domain DN409_RS13470 PF03793 PASTA domain DN409_RS13470 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS13475 PF01569 PAP2 superfamily DN409_RS13480 PF00107 Zinc-binding dehydrogenase DN409_RS13480 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS13485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS13485 PF18719 ArlS sensor domain DN409_RS13485 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS13490 PF00072 Response regulator receiver domain DN409_RS13490 PF00486 Transcriptional regulatory protein, C terminal DN409_RS13500 PF04229 GrpB protein DN409_RS13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS13510 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS13525 PF00005 ABC transporter DN409_RS13525 PF12558 ATP-binding cassette cobalt transporter DN409_RS13530 PF07155 ECF-type riboflavin transporter, S component DN409_RS13535 PF01177 Asp/Glu/Hydantoin racemase DN409_RS13540 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN409_RS13550 PF00905 Penicillin binding protein transpeptidase domain DN409_RS13550 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS13555 PF00989 PAS fold DN409_RS13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS13555 PF13426 PAS domain DN409_RS13555 PF13188 PAS domain DN409_RS13555 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS13590 PF07561 Domain of Unknown Function (DUF1540) DN409_RS13595 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_RS13610 PF00067 Cytochrome P450 DN409_RS13660 PF03070 TENA/THI-4/PQQC family DN409_RS13665 PF01820 D-ala D-ala ligase N-terminus DN409_RS13665 PF07478 D-ala D-ala ligase C-terminus DN409_RS13670 PF00155 Aminotransferase class I and II DN409_RS13670 PF00392 Bacterial regulatory proteins, gntR family DN409_RS13675 PF00742 Homoserine dehydrogenase DN409_RS13675 PF01842 ACT domain DN409_RS13675 PF03447 Homoserine dehydrogenase, NAD binding domain DN409_RS13695 PF02687 FtsX-like permease family DN409_RS13700 PF00005 ABC transporter DN409_RS13710 PF07690 Major Facilitator Superfamily DN409_RS13715 PF01609 Transposase DDE domain DN409_RS13735 PF12848 ABC transporter DN409_RS13735 PF00005 ABC transporter DN409_RS13740 PF00248 Aldo/keto reductase family DN409_RS13745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS13745 PF03466 LysR substrate binding domain DN409_RS13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS13775 PF00072 Response regulator receiver domain DN409_RS13775 PF00486 Transcriptional regulatory protein, C terminal DN409_RS13785 PF07486 Cell Wall Hydrolase DN409_RS13790 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS13790 PF00107 Zinc-binding dehydrogenase DN409_RS13795 PF00561 alpha/beta hydrolase fold DN409_RS13830 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DN409_RS13835 PF03413 Peptidase propeptide and YPEB domain DN409_RS13835 PF14620 YpeB sporulation DN409_RS13840 PF01471 Putative peptidoglycan binding domain DN409_RS13840 PF07486 Cell Wall Hydrolase DN409_RS13850 PF13028 Protein of unknown function (DUF3889) DN409_RS13865 PF03301 Tryptophan 2,3-dioxygenase DN409_RS13870 PF04199 Putative cyclase DN409_RS13875 PF00266 Aminotransferase class-V DN409_RS13880 PF08359 YsiA-like protein, C-terminal region DN409_RS13880 PF00440 Bacterial regulatory proteins, tetR family DN409_RS13895 PF00158 Sigma-54 interaction domain DN409_RS13895 PF02954 Bacterial regulatory protein, Fis family DN409_RS13895 PF01590 GAF domain DN409_RS13910 PF00455 DeoR C terminal sensor domain DN409_RS13910 PF08220 DeoR-like helix-turn-helix domain DN409_RS13930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN409_RS13930 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS13935 PF02817 e3 binding domain DN409_RS13935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN409_RS13935 PF00364 Biotin-requiring enzyme DN409_RS13940 PF02779 Transketolase, pyrimidine binding domain DN409_RS13940 PF02780 Transketolase, C-terminal domain DN409_RS13945 PF00676 Dehydrogenase E1 component DN409_RS13960 PF12833 Helix-turn-helix domain DN409_RS13965 PF00106 short chain dehydrogenase DN409_RS13970 PF13673 Acetyltransferase (GNAT) domain DN409_RS13970 PF04229 GrpB protein DN409_RS14005 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS14010 PF00005 ABC transporter DN409_RS14010 PF00571 CBS domain DN409_RS14015 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DN409_RS14020 PF00574 Clp protease DN409_RS14035 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DN409_RS14040 PF13673 Acetyltransferase (GNAT) domain DN409_RS14045 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN409_RS14045 PF18416 N-acetylglucosamine binding protein domain 2 DN409_RS14055 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN409_RS14060 PF03781 Sulfatase-modifying factor enzyme 1 DN409_RS14070 PF10990 Protein of unknown function (DUF2809) DN409_RS14075 PF04237 YjbR DN409_RS14130 PF13538 UvrD-like helicase C-terminal domain DN409_RS14145 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DN409_RS14150 PF16124 RecQ zinc-binding DN409_RS14150 PF00270 DEAD/DEAH box helicase DN409_RS14150 PF09382 RQC domain DN409_RS14150 PF00570 HRDC domain DN409_RS14150 PF00271 Helicase conserved C-terminal domain DN409_RS14185 PF01368 DHH family DN409_RS14185 PF02833 DHHA2 domain DN409_RS14190 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN409_RS14190 PF18416 N-acetylglucosamine binding protein domain 2 DN409_RS14195 PF05163 DinB family DN409_RS14210 PF03193 RsgA GTPase DN409_RS14215 PF02627 Carboxymuconolactone decarboxylase family DN409_RS14220 PF01235 Sodium:alanine symporter family DN409_RS14225 PF00171 Aldehyde dehydrogenase family DN409_RS14230 PF00701 Dihydrodipicolinate synthetase family DN409_RS14235 PF05544 Proline racemase DN409_RS14240 PF05544 Proline racemase DN409_RS14245 PF01266 FAD dependent oxidoreductase DN409_RS14250 PF02954 Bacterial regulatory protein, Fis family DN409_RS14250 PF13188 PAS domain DN409_RS14250 PF00158 Sigma-54 interaction domain DN409_RS14255 PF04324 BFD-like [2Fe-2S] binding domain DN409_RS14255 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS14265 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS14265 PF04324 BFD-like [2Fe-2S] binding domain DN409_RS14280 PF08876 Domain of unknown function (DUF1836) DN409_RS14285 PF09335 SNARE associated Golgi protein DN409_RS14300 PF04914 DltD protein DN409_RS14305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS14310 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DN409_RS14310 PF00877 NlpC/P60 family DN409_RS14315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN409_RS14315 PF13378 Enolase C-terminal domain-like DN409_RS14335 PF00248 Aldo/keto reductase family DN409_RS14340 PF01965 DJ-1/PfpI family DN409_RS14375 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DN409_RS14375 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DN409_RS14380 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS14380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS14380 PF13426 PAS domain DN409_RS14380 PF00672 HAMP domain DN409_RS14385 PF00486 Transcriptional regulatory protein, C terminal DN409_RS14385 PF00072 Response regulator receiver domain DN409_RS14400 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS14405 PF01048 Phosphorylase superfamily DN409_RS14410 PF01432 Peptidase family M3 DN409_RS14410 PF08439 Oligopeptidase F DN409_RS14425 PF02645 Uncharacterised protein, DegV family COG1307 DN409_RS14455 PF00857 Isochorismatase family DN409_RS14470 PF07690 Major Facilitator Superfamily DN409_RS14480 PF04519 Polymer-forming cytoskeletal DN409_RS14485 PF13171 Protein of unknown function (DUF4004) DN409_RS14490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS14490 PF12793 Sugar transport-related sRNA regulator N-term DN409_RS14495 PF07690 Major Facilitator Superfamily DN409_RS14510 PF00483 Nucleotidyl transferase DN409_RS14515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN409_RS14515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN409_RS14515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN409_RS14520 PF01370 NAD dependent epimerase/dehydratase family DN409_RS14525 PF13439 Glycosyltransferase Family 4 DN409_RS14525 PF00534 Glycosyl transferases group 1 DN409_RS14530 PF00872 Transposase, Mutator family DN409_RS14555 PF13439 Glycosyltransferase Family 4 DN409_RS14555 PF00534 Glycosyl transferases group 1 DN409_RS14560 PF01636 Phosphotransferase enzyme family DN409_RS14575 PF04226 Transglycosylase associated protein DN409_RS14590 PF01209 ubiE/COQ5 methyltransferase family DN409_RS14625 PF00155 Aminotransferase class I and II DN409_RS14630 PF07977 FabA-like domain DN409_RS14635 PF03630 Fumble DN409_RS14655 PF00005 ABC transporter DN409_RS14660 PF07702 UTRA domain DN409_RS14660 PF00392 Bacterial regulatory proteins, gntR family DN409_RS14705 PF01594 AI-2E family transporter DN409_RS14750 PF02522 Aminoglycoside 3-N-acetyltransferase DN409_RS14760 PF13536 Putative multidrug resistance efflux transporter DN409_RS14785 PF08713 DNA alkylation repair enzyme DN409_RS14795 PF01522 Polysaccharide deacetylase DN409_RS14810 PF07690 Major Facilitator Superfamily DN409_RS14815 PF00884 Sulfatase DN409_RS14825 PF00005 ABC transporter DN409_RS14825 PF12848 ABC transporter DN409_RS14830 PF03176 MMPL family DN409_RS14840 PF16295 Tetracyclin repressor-like, C-terminal domain DN409_RS14840 PF00440 Bacterial regulatory proteins, tetR family DN409_RS14845 PF00293 NUDIX domain DN409_RS14860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN409_RS14865 PF01842 ACT domain DN409_RS14865 PF02153 Prephenate dehydrogenase DN409_RS14870 PF00155 Aminotransferase class I and II DN409_RS14875 PF01264 Chorismate synthase DN409_RS14880 PF01817 Chorismate mutase type II DN409_RS14880 PF00793 DAHP synthetase I family DN409_RS14905 PF01636 Phosphotransferase enzyme family DN409_RS14910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_RS14910 PF02403 Seryl-tRNA synthetase N-terminal domain DN409_RS14925 PF06725 3D domain DN409_RS14925 PF01476 LysM domain DN409_RS14935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS14945 PF03358 NADPH-dependent FMN reductase DN409_RS14975 PF06039 Malate:quinone oxidoreductase (Mqo) DN409_RS14980 PF13407 Periplasmic binding protein domain DN409_RS14985 PF04198 Putative sugar-binding domain DN409_RS14990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN409_RS14990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN409_RS15000 PF01791 DeoC/LacD family aldolase DN409_RS15005 PF08241 Methyltransferase domain DN409_RS15020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS15025 PF03992 Antibiotic biosynthesis monooxygenase DN409_RS15045 PF14310 Fibronectin type III-like domain DN409_RS15045 PF00933 Glycosyl hydrolase family 3 N terminal domain DN409_RS15045 PF01915 Glycosyl hydrolase family 3 C-terminal domain DN409_RS15050 PF17853 GGDEF-like domain DN409_RS15050 PF12833 Helix-turn-helix domain DN409_RS15060 PF10924 Protein of unknown function (DUF2711) DN409_RS15065 PF00293 NUDIX domain DN409_RS15075 PF17853 GGDEF-like domain DN409_RS15075 PF12833 Helix-turn-helix domain DN409_RS15095 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_RS15095 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_RS15100 PF00171 Aldehyde dehydrogenase family DN409_RS15105 PF00696 Amino acid kinase family DN409_RS15105 PF01472 PUA domain DN409_RS15110 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN409_RS15110 PF03807 NADP oxidoreductase coenzyme F420-dependent DN409_RS15115 PF00487 Fatty acid desaturase DN409_RS15125 PF11188 Protein of unknown function (DUF2975) DN409_RS15130 PF13443 Cro/C1-type HTH DNA-binding domain DN409_RS15175 PF13302 Acetyltransferase (GNAT) domain DN409_RS15180 PF12681 Glyoxalase-like domain DN409_RS15210 PF17863 AAA lid domain DN409_RS15210 PF07726 ATPase family associated with various cellular activities (AAA) DN409_RS15225 PF07690 Major Facilitator Superfamily DN409_RS15230 PF00202 Aminotransferase class-III DN409_RS15235 PF00199 Catalase DN409_RS15235 PF06628 Catalase-related immune-responsive DN409_RS15245 PF01979 Amidohydrolase family DN409_RS15245 PF13382 Adenine deaminase C-terminal domain DN409_RS15250 PF00144 Beta-lactamase DN409_RS15270 PF17863 AAA lid domain DN409_RS15270 PF07726 ATPase family associated with various cellular activities (AAA) DN409_RS15280 PF00881 Nitroreductase family DN409_RS15285 PF01047 MarR family DN409_RS15295 PF00679 Elongation factor G C-terminus DN409_RS15295 PF14492 Elongation Factor G, domain II DN409_RS15295 PF00009 Elongation factor Tu GTP binding domain DN409_RS15295 PF03764 Elongation factor G, domain IV DN409_RS15305 PF00293 NUDIX domain DN409_RS15320 PF00005 ABC transporter DN409_RS15325 PF00392 Bacterial regulatory proteins, gntR family DN409_RS15355 PF12833 Helix-turn-helix domain DN409_RS15360 PF00583 Acetyltransferase (GNAT) family DN409_RS15375 PF00892 EamA-like transporter family DN409_RS15380 PF00392 Bacterial regulatory proteins, gntR family DN409_RS15380 PF00155 Aminotransferase class I and II DN409_RS15385 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DN409_RS15390 PF13031 Protein of unknown function (DUF3892) DN409_RS15405 PF13673 Acetyltransferase (GNAT) domain DN409_RS15405 PF04229 GrpB protein DN409_RS15430 PF01925 Sulfite exporter TauE/SafE DN409_RS15440 PF00324 Amino acid permease DN409_RS15450 PF08713 DNA alkylation repair enzyme DN409_RS15455 PF10898 Protein of unknown function (DUF2716) DN409_RS15475 PF04989 Cephalosporin hydroxylase DN409_RS15480 PF10502 Signal peptidase, peptidase S26 DN409_RS15485 PF00905 Penicillin binding protein transpeptidase domain DN409_RS15485 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS15490 PF02146 Sir2 family DN409_RS15500 PF01470 Pyroglutamyl peptidase DN409_RS15515 PF03746 LamB/YcsF family DN409_RS15520 PF02626 Carboxyltransferase domain, subdomain A and B DN409_RS15525 PF02682 Carboxyltransferase domain, subdomain C and D DN409_RS15530 PF09339 IclR helix-turn-helix domain DN409_RS15530 PF01614 Bacterial transcriptional regulator DN409_RS15535 PF10502 Signal peptidase, peptidase S26 DN409_RS15540 PF03932 CutC family DN409_RS15550 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DN409_RS15550 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_RS15550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_RS15575 PF01022 Bacterial regulatory protein, arsR family DN409_RS15585 PF07670 Nucleoside recognition DN409_RS15600 PF10903 Protein of unknown function (DUF2691) DN409_RS15605 PF02915 Rubrerythrin DN409_RS15615 PF00440 Bacterial regulatory proteins, tetR family DN409_RS15620 PF00391 PEP-utilising enzyme, mobile domain DN409_RS15620 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DN409_RS15630 PF00817 impB/mucB/samB family DN409_RS15630 PF11799 impB/mucB/samB family C-terminal domain DN409_RS15630 PF11798 IMS family HHH motif DN409_RS15640 PF11954 Domain of unknown function (DUF3471) DN409_RS15640 PF00144 Beta-lactamase DN409_RS15670 PF13026 Protein of unknown function (DUF3887) DN409_RS15670 PF12146 Serine aminopeptidase, S33 DN409_RS15685 PF01522 Polysaccharide deacetylase DN409_RS15690 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_RS15690 PF08239 Bacterial SH3 domain DN409_RS15695 PF16736 Single Cache-like DN409_RS15695 PF00989 PAS fold DN409_RS15695 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS15700 PF00486 Transcriptional regulatory protein, C terminal DN409_RS15700 PF00072 Response regulator receiver domain DN409_RS15710 PF01040 UbiA prenyltransferase family DN409_RS15720 PF00596 Class II Aldolase and Adducin N-terminal domain DN409_RS15725 PF07881 L-fucose isomerase, first N-terminal domain DN409_RS15725 PF02952 L-fucose isomerase, C-terminal domain DN409_RS15725 PF07882 L-fucose isomerase, second N-terminal domain DN409_RS15730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN409_RS15730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN409_RS15735 PF00596 Class II Aldolase and Adducin N-terminal domain DN409_RS15745 PF02653 Branched-chain amino acid transport system / permease component DN409_RS15750 PF00005 ABC transporter DN409_RS15755 PF05025 RbsD / FucU transport protein family DN409_RS15760 PF00356 Bacterial regulatory proteins, lacI family DN409_RS15770 PF12746 GNAT acetyltransferase DN409_RS15785 PF01381 Helix-turn-helix DN409_RS15795 PF00550 Phosphopantetheine attachment site DN409_RS15795 PF07993 Male sterility protein DN409_RS15800 PF00440 Bacterial regulatory proteins, tetR family DN409_RS15800 PF18665 Tetracyclin repressor-like, C-terminal domain DN409_RS15810 PF01037 Lrp/AsnC ligand binding domain DN409_RS15825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS15835 PF12323 Helix-turn-helix domain DN409_RS15835 PF07282 Putative transposase DNA-binding domain DN409_RS15835 PF01385 Probable transposase DN409_RS15855 PF08241 Methyltransferase domain DN409_RS15860 PF00067 Cytochrome P450 DN409_RS15860 PF00175 Oxidoreductase NAD-binding domain DN409_RS15860 PF00667 FAD binding domain DN409_RS15860 PF00258 Flavodoxin DN409_RS15865 PF07690 Major Facilitator Superfamily DN409_RS15895 PF00486 Transcriptional regulatory protein, C terminal DN409_RS15895 PF00072 Response regulator receiver domain DN409_RS15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS15900 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS15900 PF00672 HAMP domain DN409_RS15930 PF00291 Pyridoxal-phosphate dependent enzyme DN409_RS15945 PF02073 Thermophilic metalloprotease (M29) DN409_RS15955 PF01139 tRNA-splicing ligase RtcB DN409_RS15965 PF13411 MerR HTH family regulatory protein DN409_RS15970 PF04072 Leucine carboxyl methyltransferase DN409_RS15990 PF00005 ABC transporter DN409_RS15995 PF02687 FtsX-like permease family DN409_RS16015 PF00672 HAMP domain DN409_RS16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS16015 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS16020 PF00486 Transcriptional regulatory protein, C terminal DN409_RS16020 PF00072 Response regulator receiver domain DN409_RS16025 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_RS16025 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS16040 PF02016 LD-carboxypeptidase N-terminal domain DN409_RS16040 PF17676 LD-carboxypeptidase C-terminal domain DN409_RS16060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN409_RS16060 PF01842 ACT domain DN409_RS16060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN409_RS16065 PF00266 Aminotransferase class-V DN409_RS16090 PF04740 LXG domain of WXG superfamily DN409_RS16095 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_RS16115 PF00196 Bacterial regulatory proteins, luxR family DN409_RS16115 PF00072 Response regulator receiver domain DN409_RS16120 PF01804 Penicillin amidase DN409_RS16135 PF08361 MAATS-type transcriptional repressor, C-terminal region DN409_RS16135 PF00440 Bacterial regulatory proteins, tetR family DN409_RS16140 PF07690 Major Facilitator Superfamily DN409_RS16170 PF14044 NETI protein DN409_RS16175 PF07690 Major Facilitator Superfamily DN409_RS16185 PF12697 Alpha/beta hydrolase family DN409_RS16190 PF01047 MarR family DN409_RS16195 PF07690 Major Facilitator Superfamily DN409_RS16210 PF13610 DDE domain DN409_RS16225 PF13411 MerR HTH family regulatory protein DN409_RS16230 PF00144 Beta-lactamase DN409_RS16235 PF00144 Beta-lactamase DN409_RS16260 PF01381 Helix-turn-helix DN409_RS16270 PF13426 PAS domain DN409_RS16270 PF00158 Sigma-54 interaction domain DN409_RS16270 PF02954 Bacterial regulatory protein, Fis family DN409_RS16275 PF03606 C4-dicarboxylate anaerobic carrier DN409_RS16280 PF01979 Amidohydrolase family DN409_RS16325 PF04962 KduI/IolB family DN409_RS16330 PF01116 Fructose-bisphosphate aldolase class-II DN409_RS16335 PF01261 Xylose isomerase-like TIM barrel DN409_RS16340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_RS16340 PF00205 Thiamine pyrophosphate enzyme, central domain DN409_RS16340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_RS16345 PF00171 Aldehyde dehydrogenase family DN409_RS16350 PF00294 pfkB family carbohydrate kinase DN409_RS16355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN409_RS16355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN409_RS16365 PF07690 Major Facilitator Superfamily DN409_RS16370 PF00356 Bacterial regulatory proteins, lacI family DN409_RS16375 PF12323 Helix-turn-helix domain DN409_RS16375 PF07282 Putative transposase DNA-binding domain DN409_RS16375 PF01385 Probable transposase DN409_RS16440 PF00350 Dynamin family DN409_RS16455 PF02976 DNA mismatch repair enzyme MutH DN409_RS16465 PF00145 C-5 cytosine-specific DNA methylase DN409_RS16475 PF02976 DNA mismatch repair enzyme MutH DN409_RS16560 PF11799 impB/mucB/samB family C-terminal domain DN409_RS16560 PF11798 IMS family HHH motif DN409_RS16560 PF00817 impB/mucB/samB family DN409_RS16620 PF18801 response regulator aspartate phosphatase H, N terminal DN409_RS16645 PF10676 Spore germination protein gerPA/gerPF DN409_RS16680 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN409_RS16680 PF00753 Metallo-beta-lactamase superfamily DN409_RS16690 PF00144 Beta-lactamase DN409_RS16695 PF12389 Camelysin metallo-endopeptidase DN409_RS16705 PF00144 Beta-lactamase DN409_RS16740 PF01546 Peptidase family M20/M25/M40 DN409_RS16760 PF17827 PrmC N-terminal domain DN409_RS16760 PF05175 Methyltransferase small domain DN409_RS16765 PF02667 Short chain fatty acid transporter DN409_RS16775 PF02525 Flavodoxin-like fold DN409_RS16795 PF14256 YwiC-like protein DN409_RS16815 PF00005 ABC transporter DN409_RS16835 PF03737 Aldolase/RraA DN409_RS16840 PF03606 C4-dicarboxylate anaerobic carrier DN409_RS16845 PF04231 Endonuclease I DN409_RS16850 PF01048 Phosphorylase superfamily DN409_RS16870 PF04073 Aminoacyl-tRNA editing domain DN409_RS16875 PF13393 Histidyl-tRNA synthetase DN409_RS16875 PF03129 Anticodon binding domain DN409_RS16885 PF02887 Pyruvate kinase, alpha/beta domain DN409_RS16885 PF00224 Pyruvate kinase, barrel domain DN409_RS16885 PF00391 PEP-utilising enzyme, mobile domain DN409_RS16890 PF00245 Alkaline phosphatase DN409_RS16895 PF00881 Nitroreductase family DN409_RS16900 PF01638 HxlR-like helix-turn-helix DN409_RS16925 PF00005 ABC transporter DN409_RS16955 PF04542 Sigma-70 region 2 DN409_RS16955 PF08281 Sigma-70, region 4 DN409_RS16970 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS16975 PF13350 Tyrosine phosphatase family DN409_RS16990 PF00293 NUDIX domain DN409_RS16990 PF13344 Haloacid dehalogenase-like hydrolase DN409_RS16995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS17000 PF00480 ROK family DN409_RS17005 PF07690 Major Facilitator Superfamily DN409_RS17010 PF14602 Hexapeptide repeat of succinyl-transferase DN409_RS17010 PF12464 Maltose acetyltransferase DN409_RS17015 PF00579 tRNA synthetases class I (W and Y) DN409_RS17020 PF13288 DXP reductoisomerase C-terminal domain DN409_RS17020 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN409_RS17020 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN409_RS17025 PF01594 AI-2E family transporter DN409_RS17030 PF04226 Transglycosylase associated protein DN409_RS17065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS17075 PF00571 CBS domain DN409_RS17075 PF01595 Cyclin M transmembrane N-terminal domain DN409_RS17075 PF03471 Transporter associated domain DN409_RS17080 PF13411 MerR HTH family regulatory protein DN409_RS17085 PF00892 EamA-like transporter family DN409_RS17095 PF00805 Pentapeptide repeats (8 copies) DN409_RS17100 PF06906 Protein of unknown function (DUF1272) DN409_RS17105 PF10282 Lactonase, 7-bladed beta-propeller DN409_RS17110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN409_RS17110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN409_RS17115 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN409_RS17120 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN409_RS17120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN409_RS17125 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DN409_RS17125 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DN409_RS17130 PF03928 Haem-degrading DN409_RS17160 PF02567 Phenazine biosynthesis-like protein DN409_RS17180 PF13193 AMP-binding enzyme C-terminal domain DN409_RS17180 PF00501 AMP-binding enzyme DN409_RS17185 PF02525 Flavodoxin-like fold DN409_RS17190 PF01638 HxlR-like helix-turn-helix DN409_RS17195 PF01022 Bacterial regulatory protein, arsR family DN409_RS17200 PF12791 Anti-sigma factor N-terminus DN409_RS17205 PF04542 Sigma-70 region 2 DN409_RS17230 PF02557 D-alanyl-D-alanine carboxypeptidase DN409_RS17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS17245 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS17300 PF13426 PAS domain DN409_RS17300 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS17300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS17300 PF00672 HAMP domain DN409_RS17305 PF00072 Response regulator receiver domain DN409_RS17305 PF00486 Transcriptional regulatory protein, C terminal DN409_RS17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS17315 PF03466 LysR substrate binding domain DN409_RS17330 PF07690 Major Facilitator Superfamily DN409_RS17335 PF01609 Transposase DDE domain DN409_RS17340 PF07859 alpha/beta hydrolase fold DN409_RS17350 PF07690 Major Facilitator Superfamily DN409_RS17355 PF00440 Bacterial regulatory proteins, tetR family DN409_RS17375 PF00463 Isocitrate lyase family DN409_RS17410 PF01061 ABC-2 type transporter DN409_RS17415 PF13732 Domain of unknown function (DUF4162) DN409_RS17415 PF00005 ABC transporter DN409_RS17430 PF03063 Prismane/CO dehydrogenase family DN409_RS17435 PF00753 Metallo-beta-lactamase superfamily DN409_RS17460 PF00144 Beta-lactamase DN409_RS17500 PF00753 Metallo-beta-lactamase superfamily DN409_RS17515 PF03551 Transcriptional regulator PadR-like family DN409_RS17520 PF00107 Zinc-binding dehydrogenase DN409_RS17520 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS17525 PF00324 Amino acid permease DN409_RS17535 PF07690 Major Facilitator Superfamily DN409_RS17540 PF07969 Amidohydrolase family DN409_RS17550 PF00202 Aminotransferase class-III DN409_RS17555 PF00171 Aldehyde dehydrogenase family DN409_RS17565 PF01554 MatE DN409_RS17570 PF00171 Aldehyde dehydrogenase family DN409_RS17575 PF01266 FAD dependent oxidoreductase DN409_RS17585 PF02585 GlcNAc-PI de-N-acetylase DN409_RS17590 PF08830 Protein of unknown function (DUF1806) DN409_RS17595 PF03600 Citrate transporter DN409_RS17615 PF01497 Periplasmic binding protein DN409_RS17620 PF01032 FecCD transport family DN409_RS17625 PF01032 FecCD transport family DN409_RS17630 PF05675 Protein of unknown function (DUF817) DN409_RS17655 PF03466 LysR substrate binding domain DN409_RS17655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS17660 PF00107 Zinc-binding dehydrogenase DN409_RS17660 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS17675 PF01713 Smr domain DN409_RS17675 PF00488 MutS domain V DN409_RS17690 PF09154 Domain of unknown function (DUF1939) DN409_RS17690 PF00128 Alpha amylase, catalytic domain DN409_RS17695 PF00797 N-acetyltransferase DN409_RS17700 PF08439 Oligopeptidase F DN409_RS17700 PF01432 Peptidase family M3 DN409_RS17705 PF04371 Porphyromonas-type peptidyl-arginine deiminase DN409_RS17710 PF07969 Amidohydrolase family DN409_RS17725 PF01062 Bestrophin, RFP-TM, chloride channel DN409_RS17730 PF06146 Phosphate-starvation-inducible E DN409_RS17735 PF04371 Porphyromonas-type peptidyl-arginine deiminase DN409_RS17740 PF00144 Beta-lactamase DN409_RS17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS17755 PF03466 LysR substrate binding domain DN409_RS17775 PF13538 UvrD-like helicase C-terminal domain DN409_RS17785 PF01494 FAD binding domain DN409_RS17790 PF01022 Bacterial regulatory protein, arsR family DN409_RS17795 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS17795 PF00107 Zinc-binding dehydrogenase DN409_RS17800 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DN409_RS17810 PF18801 response regulator aspartate phosphatase H, N terminal DN409_RS17815 PF04299 Putative FMN-binding domain DN409_RS17820 PF04229 GrpB protein DN409_RS17830 PF01565 FAD binding domain DN409_RS17830 PF02913 FAD linked oxidases, C-terminal domain DN409_RS17845 PF18496 Collagenase G catalytic helper subdomain DN409_RS17845 PF01752 Collagenase DN409_RS17845 PF08453 Peptidase family M9 N-terminal DN409_RS17850 PF02308 MgtC family DN409_RS17860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS17865 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_RS17870 PF00005 ABC transporter DN409_RS17875 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS17880 PF04294 VanW like protein DN409_RS17890 PF13039 Protein of unknown function (DUF3900) DN409_RS17890 PF13037 Domain of unknown function (DUF3898) DN409_RS17905 PF00313 'Cold-shock' DNA-binding domain DN409_RS17915 PF00258 Flavodoxin DN409_RS17935 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_RS17945 PF00106 short chain dehydrogenase DN409_RS17955 PF00206 Lyase DN409_RS17955 PF14698 Argininosuccinate lyase C-terminal DN409_RS17965 PF01156 Inosine-uridine preferring nucleoside hydrolase DN409_RS17970 PF00474 Sodium:solute symporter family DN409_RS17980 PF00171 Aldehyde dehydrogenase family DN409_RS17995 PF13243 Squalene-hopene cyclase C-terminal domain DN409_RS17995 PF13249 Squalene-hopene cyclase N-terminal domain DN409_RS18000 PF02681 Divergent PAP2 family DN409_RS18005 PF00892 EamA-like transporter family DN409_RS18010 PF06961 Protein of unknown function (DUF1294) DN409_RS18015 PF13520 Amino acid permease DN409_RS18045 PF08241 Methyltransferase domain DN409_RS18050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS18055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS18060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_RS18065 PF03816 Cell envelope-related transcriptional attenuator domain DN409_RS18075 PF08281 Sigma-70, region 4 DN409_RS18075 PF04542 Sigma-70 region 2 DN409_RS18085 PF00005 ABC transporter DN409_RS18085 PF13732 Domain of unknown function (DUF4162) DN409_RS18105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN409_RS18105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN409_RS18110 PF00521 DNA gyrase/topoisomerase IV, subunit A DN409_RS18110 PF03989 DNA gyrase C-terminal domain, beta-propeller DN409_RS18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS18115 PF00986 DNA gyrase B subunit, carboxyl terminus DN409_RS18115 PF00204 DNA gyrase B DN409_RS18115 PF01751 Toprim domain DN409_RS18120 PF13380 CoA binding domain DN409_RS18125 PF13180 PDZ domain DN409_RS18130 PF00486 Transcriptional regulatory protein, C terminal DN409_RS18130 PF00072 Response regulator receiver domain DN409_RS18140 PF13597 Anaerobic ribonucleoside-triphosphate reductase DN409_RS18140 PF03477 ATP cone domain DN409_RS18145 PF02660 Glycerol-3-phosphate acyltransferase DN409_RS18150 PF01521 Iron-sulphur cluster biosynthesis DN409_RS18155 PF03061 Thioesterase superfamily DN409_RS18160 PF00704 Glycosyl hydrolases family 18 DN409_RS18160 PF01476 LysM domain DN409_RS18165 PF08177 Small acid-soluble spore protein N family DN409_RS18170 PF13040 Fur-regulated basic protein B DN409_RS18175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN409_RS18175 PF14579 Helix-hairpin-helix motif DN409_RS18175 PF02811 PHP domain DN409_RS18175 PF01336 OB-fold nucleic acid binding domain DN409_RS18175 PF11490 DNA polymerase III polC-type N-terminus II DN409_RS18175 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN409_RS18175 PF00929 Exonuclease DN409_RS18180 PF00578 AhpC/TSA family DN409_RS18215 PF00664 ABC transporter transmembrane region DN409_RS18215 PF00005 ABC transporter DN409_RS18220 PF02517 CPBP intramembrane metalloprotease DN409_RS18225 PF00330 Aconitase family (aconitate hydratase) DN409_RS18225 PF00694 Aconitase C-terminal domain DN409_RS18235 PF01522 Polysaccharide deacetylase DN409_RS18245 PF08179 Small acid-soluble spore protein P family DN409_RS18255 PF07690 Major Facilitator Superfamily DN409_RS18265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN409_RS18265 PF02272 DHHA1 domain DN409_RS18265 PF01411 tRNA synthetases class II (A) DN409_RS18280 PF02803 Thiolase, C-terminal domain DN409_RS18280 PF00108 Thiolase, N-terminal domain DN409_RS18285 PF13193 AMP-binding enzyme C-terminal domain DN409_RS18285 PF00501 AMP-binding enzyme DN409_RS18290 PF02632 BioY family DN409_RS18295 PF13193 AMP-binding enzyme C-terminal domain DN409_RS18295 PF00501 AMP-binding enzyme DN409_RS18320 PF05532 CsbD-like DN409_RS18345 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_RS18345 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS18360 PF13426 PAS domain DN409_RS18360 PF13188 PAS domain DN409_RS18360 PF00989 PAS fold DN409_RS18360 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS18370 PF01738 Dienelactone hydrolase family DN409_RS18375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS18380 PF01645 Conserved region in glutamate synthase DN409_RS18385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN409_RS18390 PF00107 Zinc-binding dehydrogenase DN409_RS18390 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS18395 PF02559 CarD-like/TRCF domain DN409_RS18400 PF00491 Arginase family DN409_RS18405 PF01979 Amidohydrolase family DN409_RS18410 PF01175 Urocanase Rossmann-like domain DN409_RS18410 PF17392 Urocanase C-terminal domain DN409_RS18410 PF17391 Urocanase N-terminal domain DN409_RS18415 PF00221 Aromatic amino acid lyase DN409_RS18420 PF09021 HutP DN409_RS18425 PF01209 ubiE/COQ5 methyltransferase family DN409_RS18450 PF11084 Protein of unknown function (DUF2621) DN409_RS18455 PF07301 Protein of unknown function (DUF1453) DN409_RS18460 PF02683 Cytochrome C biogenesis protein transmembrane region DN409_RS18475 PF01546 Peptidase family M20/M25/M40 DN409_RS18475 PF07687 Peptidase dimerisation domain DN409_RS18480 PF12679 ABC-2 family transporter protein DN409_RS18485 PF00005 ABC transporter DN409_RS18495 PF03466 LysR substrate binding domain DN409_RS18495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS18500 PF03788 LrgA family DN409_RS18505 PF04172 LrgB-like family DN409_RS18510 PF13344 Haloacid dehalogenase-like hydrolase DN409_RS18510 PF00293 NUDIX domain DN409_RS18520 PF01925 Sulfite exporter TauE/SafE DN409_RS18530 PF01510 N-acetylmuramoyl-L-alanine amidase DN409_RS18530 PF01471 Putative peptidoglycan binding domain DN409_RS18545 PF08239 Bacterial SH3 domain DN409_RS18545 PF01183 Glycosyl hydrolases family 25 DN409_RS18550 PF00664 ABC transporter transmembrane region DN409_RS18550 PF00005 ABC transporter DN409_RS18555 PF00664 ABC transporter transmembrane region DN409_RS18555 PF00005 ABC transporter DN409_RS18560 PF03672 Uncharacterised protein family (UPF0154) DN409_RS18565 PF10747 Sporulation inhibitor of replication protein SirA DN409_RS18570 PF02779 Transketolase, pyrimidine binding domain DN409_RS18570 PF00456 Transketolase, thiamine diphosphate binding domain DN409_RS18570 PF02780 Transketolase, C-terminal domain DN409_RS18575 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS18580 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS18585 PF00005 ABC transporter DN409_RS18590 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_RS18595 PF00149 Calcineurin-like phosphoesterase DN409_RS18595 PF02872 5'-nucleotidase, C-terminal domain DN409_RS18600 PF05979 Bacterial protein of unknown function (DUF896) DN409_RS18605 PF00239 Resolvase, N terminal domain DN409_RS18610 PF01726 LexA DNA binding domain DN409_RS18610 PF00717 Peptidase S24-like DN409_RS18625 PF03551 Transcriptional regulator PadR-like family DN409_RS18630 PF00664 ABC transporter transmembrane region DN409_RS18630 PF00005 ABC transporter DN409_RS18665 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN409_RS18675 PF02397 Bacterial sugar transferase DN409_RS18685 PF13229 Right handed beta helix region DN409_RS18695 PF01501 Glycosyl transferase family 8 DN409_RS18695 PF08759 Glycosyltransferase GT-D fold DN409_RS18700 PF01501 Glycosyl transferase family 8 DN409_RS18700 PF00535 Glycosyl transferase family 2 DN409_RS18705 PF00534 Glycosyl transferases group 1 DN409_RS18715 PF08323 Starch synthase catalytic domain DN409_RS18715 PF00534 Glycosyl transferases group 1 DN409_RS18725 PF00534 Glycosyl transferases group 1 DN409_RS18725 PF13439 Glycosyltransferase Family 4 DN409_RS18735 PF00535 Glycosyl transferase family 2 DN409_RS18740 PF00534 Glycosyl transferases group 1 DN409_RS18740 PF13439 Glycosyltransferase Family 4 DN409_RS18745 PF13439 Glycosyltransferase Family 4 DN409_RS18745 PF00534 Glycosyl transferases group 1 DN409_RS18750 PF02719 Polysaccharide biosynthesis protein DN409_RS18755 PF13614 AAA domain DN409_RS18760 PF13807 G-rich domain on putative tyrosine kinase DN409_RS18760 PF02706 Chain length determinant protein DN409_RS18765 PF03951 Glutamine synthetase, beta-Grasp domain DN409_RS18765 PF00120 Glutamine synthetase, catalytic domain DN409_RS18770 PF13411 MerR HTH family regulatory protein DN409_RS18775 PF06838 Methionine gamma-lyase DN409_RS18780 PF01926 50S ribosome-binding GTPase DN409_RS18780 PF13167 GTP-binding GTPase N-terminal DN409_RS18780 PF16360 GTP-binding GTPase Middle Region DN409_RS18785 PF03458 UPF0126 domain DN409_RS18790 PF17866 AAA lid domain DN409_RS18790 PF00004 ATPase family associated with various cellular activities (AAA) DN409_RS18805 PF17209 Hfq protein DN409_RS18820 PF01476 LysM domain DN409_RS18820 PF06725 3D domain DN409_RS18825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN409_RS18825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN409_RS18830 PF00294 pfkB family carbohydrate kinase DN409_RS18835 PF08220 DeoR-like helix-turn-helix domain DN409_RS18835 PF00455 DeoR C terminal sensor domain DN409_RS18840 PF00465 Iron-containing alcohol dehydrogenase DN409_RS18845 PF04238 Protein of unknown function (DUF420) DN409_RS18855 PF00324 Amino acid permease DN409_RS18865 PF00704 Glycosyl hydrolases family 18 DN409_RS18865 PF00041 Fibronectin type III domain DN409_RS18870 PF07687 Peptidase dimerisation domain DN409_RS18870 PF01546 Peptidase family M20/M25/M40 DN409_RS18875 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN409_RS18875 PF00149 Calcineurin-like phosphoesterase DN409_RS18880 PF01226 Formate/nitrite transporter DN409_RS18885 PF00216 Bacterial DNA-binding protein DN409_RS18895 PF00403 Heavy-metal-associated domain DN409_RS18900 PF00403 Heavy-metal-associated domain DN409_RS18905 PF02583 Metal-sensitive transcriptional repressor DN409_RS18920 PF08241 Methyltransferase domain DN409_RS18925 PF00756 Putative esterase DN409_RS18930 PF00005 ABC transporter DN409_RS18935 PF01032 FecCD transport family DN409_RS18940 PF01032 FecCD transport family DN409_RS18945 PF01497 Periplasmic binding protein DN409_RS18950 PF03372 Endonuclease/Exonuclease/phosphatase family DN409_RS18955 PF02805 Metal binding domain of Ada DN409_RS18955 PF12833 Helix-turn-helix domain DN409_RS18960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN409_RS18960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN409_RS18965 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DN409_RS18965 PF00730 HhH-GPD superfamily base excision DNA repair protein DN409_RS18970 PF10282 Lactonase, 7-bladed beta-propeller DN409_RS18975 PF01546 Peptidase family M20/M25/M40 DN409_RS18975 PF07687 Peptidase dimerisation domain DN409_RS18990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS18995 PF00563 EAL domain DN409_RS18995 PF00990 Diguanylate cyclase, GGDEF domain DN409_RS18995 PF03707 Bacterial signalling protein N terminal repeat DN409_RS19000 PF04101 Glycosyltransferase family 28 C-terminal domain DN409_RS19000 PF03033 Glycosyltransferase family 28 N-terminal domain DN409_RS19010 PF16363 GDP-mannose 4,6 dehydratase DN409_RS19015 PF02719 Polysaccharide biosynthesis protein DN409_RS19015 PF08485 Polysaccharide biosynthesis protein C-terminal DN409_RS19030 PF10787 Uncharacterised protein from bacillus cereus group DN409_RS19035 PF04172 LrgB-like family DN409_RS19040 PF03788 LrgA family DN409_RS19045 PF00155 Aminotransferase class I and II DN409_RS19045 PF00392 Bacterial regulatory proteins, gntR family DN409_RS19050 PF00561 alpha/beta hydrolase fold DN409_RS19050 PF00364 Biotin-requiring enzyme DN409_RS19055 PF02585 GlcNAc-PI de-N-acetylase DN409_RS19070 PF07702 UTRA domain DN409_RS19070 PF00392 Bacterial regulatory proteins, gntR family DN409_RS19075 PF00232 Glycosyl hydrolase family 1 DN409_RS19080 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DN409_RS19085 PF07486 Cell Wall Hydrolase DN409_RS19095 PF00350 Dynamin family DN409_RS19105 PF00232 Glycosyl hydrolase family 1 DN409_RS19110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN409_RS19110 PF00367 phosphotransferase system, EIIB DN409_RS19110 PF02378 Phosphotransferase system, EIIC DN409_RS19115 PF03123 CAT RNA binding domain DN409_RS19115 PF00874 PRD domain DN409_RS19130 PF00892 EamA-like transporter family DN409_RS19135 PF00392 Bacterial regulatory proteins, gntR family DN409_RS19135 PF00155 Aminotransferase class I and II DN409_RS19140 PF08676 MutL C terminal dimerisation domain DN409_RS19140 PF01119 DNA mismatch repair protein, C-terminal domain DN409_RS19145 PF05190 MutS family domain IV DN409_RS19145 PF05188 MutS domain II DN409_RS19145 PF05192 MutS domain III DN409_RS19145 PF00488 MutS domain V DN409_RS19145 PF01624 MutS domain I DN409_RS19150 PF10628 Outer spore coat protein E (CotE) DN409_RS19155 PF06133 Control of competence regulator ComK, YlbF/YmcA DN409_RS19160 PF04055 Radical SAM superfamily DN409_RS19160 PF01938 TRAM domain DN409_RS19160 PF00919 Uncharacterized protein family UPF0004 DN409_RS19165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_RS19170 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DN409_RS19170 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DN409_RS19170 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DN409_RS19175 PF01244 Membrane dipeptidase (Peptidase family M19) DN409_RS19180 PF04232 Stage V sporulation protein S (SpoVS) DN409_RS19185 PF13277 YmdB-like protein DN409_RS19190 PF12072 Domain of unknown function (DUF3552) DN409_RS19190 PF00013 KH domain DN409_RS19190 PF01966 HD domain DN409_RS19195 PF00154 recA bacterial DNA recombination protein DN409_RS19200 PF00994 Probable molybdopterin binding domain DN409_RS19200 PF18146 Damage-inducible protein CinA KH domain DN409_RS19200 PF02464 Competence-damaged protein DN409_RS19205 PF01066 CDP-alcohol phosphatidyltransferase DN409_RS19210 PF13464 Domain of unknown function (DUF4115) DN409_RS19215 PF11868 Protein of unknown function (DUF3388) DN409_RS19220 PF11588 Protein of unknown function (DUF3243) DN409_RS19230 PF05193 Peptidase M16 inactive domain DN409_RS19230 PF00675 Insulinase (Peptidase family M16) DN409_RS19235 PF05193 Peptidase M16 inactive domain DN409_RS19240 PF02653 Branched-chain amino acid transport system / permease component DN409_RS19245 PF02653 Branched-chain amino acid transport system / permease component DN409_RS19250 PF00005 ABC transporter DN409_RS19255 PF02608 ABC transporter substrate-binding protein PnrA-like DN409_RS19260 PF00392 Bacterial regulatory proteins, gntR family DN409_RS19260 PF07702 UTRA domain DN409_RS19270 PF17854 FtsK alpha domain DN409_RS19270 PF09397 Ftsk gamma domain DN409_RS19270 PF01580 FtsK/SpoIIIE family DN409_RS19275 PF14035 YlzJ-like protein DN409_RS19280 PF00574 Clp protease DN409_RS19285 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN409_RS19285 PF00753 Metallo-beta-lactamase superfamily DN409_RS19285 PF17770 Ribonuclease J C-terminal domain DN409_RS19290 PF00701 Dihydrodipicolinate synthetase family DN409_RS19295 PF00696 Amino acid kinase family DN409_RS19295 PF13840 ACT domain DN409_RS19300 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN409_RS19300 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN409_RS19305 PF02441 Flavoprotein DN409_RS19310 PF16924 Dipicolinate synthase subunit A N-terminal domain DN409_RS19310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN409_RS19315 PF05239 PRC-barrel domain DN409_RS19320 PF00675 Insulinase (Peptidase family M16) DN409_RS19320 PF05193 Peptidase M16 inactive domain DN409_RS19325 PF01522 Polysaccharide deacetylase DN409_RS19330 PF03725 3' exoribonuclease family, domain 2 DN409_RS19330 PF00575 S1 RNA binding domain DN409_RS19330 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DN409_RS19330 PF00013 KH domain DN409_RS19330 PF01138 3' exoribonuclease family, domain 1 DN409_RS19335 PF00312 Ribosomal protein S15 DN409_RS19340 PF01687 Riboflavin kinase DN409_RS19340 PF06574 FAD synthetase DN409_RS19345 PF01509 TruB family pseudouridylate synthase (N terminal domain) DN409_RS19345 PF16198 tRNA pseudouridylate synthase B C-terminal domain DN409_RS19350 PF02033 Ribosome-binding factor A DN409_RS19355 PF04456 Protein of unknown function (DUF503) DN409_RS19360 PF11987 Translation-initiation factor 2 DN409_RS19360 PF00009 Elongation factor Tu GTP binding domain DN409_RS19360 PF04760 Translation initiation factor IF-2, N-terminal region DN409_RS19365 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN409_RS19370 PF04296 Protein of unknown function (DUF448) DN409_RS19375 PF13184 NusA-like KH domain DN409_RS19375 PF00575 S1 RNA binding domain DN409_RS19375 PF08529 NusA N-terminal domain DN409_RS19380 PF02576 RimP N-terminal domain DN409_RS19380 PF17384 RimP C-terminal SH3 domain DN409_RS19385 PF02811 PHP domain DN409_RS19385 PF00929 Exonuclease DN409_RS19385 PF14579 Helix-hairpin-helix motif DN409_RS19385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN409_RS19385 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN409_RS19385 PF11490 DNA polymerase III polC-type N-terminus II DN409_RS19385 PF14480 DNA polymerase III polC-type N-terminus I DN409_RS19390 PF03129 Anticodon binding domain DN409_RS19390 PF04073 Aminoacyl-tRNA editing domain DN409_RS19390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_RS19395 PF02163 Peptidase family M50 DN409_RS19395 PF17820 PDZ domain DN409_RS19400 PF13288 DXP reductoisomerase C-terminal domain DN409_RS19400 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN409_RS19400 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN409_RS19410 PF01255 Putative undecaprenyl diphosphate synthase DN409_RS19415 PF01765 Ribosome recycling factor DN409_RS19420 PF00696 Amino acid kinase family DN409_RS19425 PF00889 Elongation factor TS DN409_RS19430 PF00318 Ribosomal protein S2 DN409_RS19435 PF06018 CodY GAF-like domain DN409_RS19435 PF08222 CodY helix-turn-helix domain DN409_RS19440 PF00004 ATPase family associated with various cellular activities (AAA) DN409_RS19440 PF07724 AAA domain (Cdc48 subfamily) DN409_RS19440 PF10431 C-terminal, D2-small domain, of ClpB protein DN409_RS19445 PF00227 Proteasome subunit DN409_RS19450 PF00589 Phage integrase family DN409_RS19450 PF02899 Phage integrase, N-terminal SAM-like domain DN409_RS19455 PF01134 Glucose inhibited division protein A DN409_RS19460 PF01396 Topoisomerase DNA binding C4 zinc finger DN409_RS19460 PF01131 DNA topoisomerase DN409_RS19460 PF01751 Toprim domain DN409_RS19465 PF02481 DNA recombination-mediator protein A DN409_RS19470 PF00549 CoA-ligase DN409_RS19470 PF02629 CoA binding domain DN409_RS19475 PF08442 ATP-grasp domain DN409_RS19475 PF00549 CoA-ligase DN409_RS19480 PF01351 Ribonuclease HII DN409_RS19485 PF01926 50S ribosome-binding GTPase DN409_RS19490 PF10502 Signal peptidase, peptidase S26 DN409_RS19495 PF01245 Ribosomal protein L19 DN409_RS19500 PF01746 tRNA (Guanine-1)-methyltransferase DN409_RS19505 PF01782 RimM N-terminal domain DN409_RS19505 PF05239 PRC-barrel domain DN409_RS19515 PF00886 Ribosomal protein S16 DN409_RS19520 PF00448 SRP54-type protein, GTPase domain DN409_RS19520 PF02978 Signal peptide binding domain DN409_RS19520 PF02881 SRP54-type protein, helical bundle domain DN409_RS19525 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DN409_RS19530 PF02881 SRP54-type protein, helical bundle domain DN409_RS19530 PF00448 SRP54-type protein, GTPase domain DN409_RS19535 PF06470 SMC proteins Flexible Hinge Domain DN409_RS19535 PF02463 RecF/RecN/SMC N terminal domain DN409_RS19540 PF14622 Ribonuclease-III-like DN409_RS19540 PF00035 Double-stranded RNA binding motif DN409_RS19545 PF00550 Phosphopantetheine attachment site DN409_RS19555 PF00698 Acyl transferase domain DN409_RS19560 PF02504 Fatty acid synthesis protein DN409_RS19565 PF03061 Thioesterase superfamily DN409_RS19570 PF00271 Helicase conserved C-terminal domain DN409_RS19570 PF00270 DEAD/DEAH box helicase DN409_RS19570 PF17191 RecG wedge domain DN409_RS19575 PF13684 Dihydroxyacetone kinase family DN409_RS19575 PF02734 DAK2 domain DN409_RS19580 PF03780 Asp23 family, cell envelope-related function DN409_RS19585 PF00830 Ribosomal L28 family DN409_RS19590 PF08183 Stage V sporulation protein family DN409_RS19595 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DN409_RS19595 PF04263 Thiamin pyrophosphokinase, catalytic domain DN409_RS19600 PF00834 Ribulose-phosphate 3 epimerase family DN409_RS19605 PF03193 RsgA GTPase DN409_RS19605 PF16745 RsgA N-terminal domain DN409_RS19610 PF03793 PASTA domain DN409_RS19610 PF00069 Protein kinase domain DN409_RS19620 PF04055 Radical SAM superfamily DN409_RS19625 PF01029 NusB family DN409_RS19625 PF01189 16S rRNA methyltransferase RsmB/F DN409_RS19630 PF00551 Formyl transferase DN409_RS19630 PF02911 Formyl transferase, C-terminal domain DN409_RS19635 PF01327 Polypeptide deformylase DN409_RS19640 PF04851 Type III restriction enzyme, res subunit DN409_RS19640 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DN409_RS19640 PF18074 Primosomal protein N C-terminal domain DN409_RS19640 PF17764 3′ DNA-binding domain (3′BD) DN409_RS19640 PF00271 Helicase conserved C-terminal domain DN409_RS19645 PF02441 Flavoprotein DN409_RS19645 PF04127 DNA / pantothenate metabolism flavoprotein DN409_RS19650 PF01192 RNA polymerase Rpb6 DN409_RS19655 PF00625 Guanylate kinase DN409_RS19660 PF04025 Domain of unknown function (DUF370) DN409_RS19665 PF08340 Domain of unknown function (DUF1732) DN409_RS19665 PF03755 YicC-like family, N-terminal region DN409_RS19670 PF00689 Cation transporting ATPase, C-terminus DN409_RS19670 PF00690 Cation transporter/ATPase, N-terminus DN409_RS19675 PF05670 NFACT protein RNA binding domain DN409_RS19685 PF00557 Metallopeptidase family M24 DN409_RS19685 PF01321 Creatinase/Prolidase N-terminal domain DN409_RS19715 PF00156 Phosphoribosyl transferase domain DN409_RS19720 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DN409_RS19725 PF01180 Dihydroorotate dehydrogenase DN409_RS19730 PF00970 Oxidoreductase FAD-binding domain DN409_RS19730 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DN409_RS19735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN409_RS19735 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DN409_RS19735 PF02142 MGS-like domain DN409_RS19740 PF00117 Glutamine amidotransferase class-I DN409_RS19740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DN409_RS19745 PF01979 Amidohydrolase family DN409_RS19750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN409_RS19750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN409_RS19755 PF00860 Permease family DN409_RS19760 PF00156 Phosphoribosyl transferase domain DN409_RS19765 PF00849 RNA pseudouridylate synthase DN409_RS19765 PF01479 S4 domain DN409_RS19770 PF01252 Signal peptidase (SPase) II DN409_RS19780 PF06827 Zinc finger found in FPG and IleRS DN409_RS19780 PF00133 tRNA synthetases class I (I, L, M and V) DN409_RS19780 PF08264 Anticodon-binding domain of tRNA DN409_RS19785 PF05103 DivIVA protein DN409_RS19790 PF17774 Putative RNA-binding domain in YlmH DN409_RS19790 PF01479 S4 domain DN409_RS19795 PF02325 YGGT family DN409_RS19800 PF04472 Cell division protein SepF DN409_RS19805 PF01168 Alanine racemase, N-terminal domain DN409_RS19810 PF02578 Multi-copper polyphenol oxidoreductase laccase DN409_RS19815 PF05239 PRC-barrel domain DN409_RS19820 PF04542 Sigma-70 region 2 DN409_RS19820 PF04539 Sigma-70 region 3 DN409_RS19820 PF04545 Sigma-70, region 4 DN409_RS19825 PF04542 Sigma-70 region 2 DN409_RS19825 PF04545 Sigma-70, region 4 DN409_RS19830 PF03419 Sporulation factor SpoIIGA DN409_RS19835 PF00091 Tubulin/FtsZ family, GTPase domain DN409_RS19835 PF12327 FtsZ family, C-terminal domain DN409_RS19840 PF02491 SHS2 domain inserted in FTSA DN409_RS19845 PF08478 POTRA domain, FtsQ-type DN409_RS19845 PF03799 Cell division protein FtsQ DN409_RS19850 PF01565 FAD binding domain DN409_RS19850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN409_RS19855 PF03033 Glycosyltransferase family 28 N-terminal domain DN409_RS19855 PF04101 Glycosyltransferase family 28 C-terminal domain DN409_RS19860 PF01098 Cell cycle protein DN409_RS19865 PF08245 Mur ligase middle domain DN409_RS19865 PF02875 Mur ligase family, glutamate ligase domain DN409_RS19870 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DN409_RS19870 PF00953 Glycosyl transferase family 4 DN409_RS19875 PF02875 Mur ligase family, glutamate ligase domain DN409_RS19875 PF01225 Mur ligase family, catalytic domain DN409_RS19875 PF08245 Mur ligase middle domain DN409_RS19880 PF00905 Penicillin binding protein transpeptidase domain DN409_RS19880 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS19880 PF03793 PASTA domain DN409_RS19885 PF00905 Penicillin binding protein transpeptidase domain DN409_RS19885 PF03793 PASTA domain DN409_RS19885 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS19890 PF04977 Septum formation initiator DN409_RS19895 PF01795 MraW methylase family DN409_RS19900 PF10079 Bacillithiol biosynthesis BshC DN409_RS19905 PF02558 Ketopantoate reductase PanE/ApbA DN409_RS19905 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN409_RS19910 PF00583 Acetyltransferase (GNAT) family DN409_RS19920 PF01783 Ribosomal L32p protein family DN409_RS19925 PF02620 Large ribosomal RNA subunit accumulation protein YceD DN409_RS19930 PF05636 HIGH Nucleotidyl Transferase DN409_RS19935 PF05362 Lon protease (S16) C-terminal proteolytic domain DN409_RS19935 PF13180 PDZ domain DN409_RS19940 PF01734 Patatin-like phospholipase DN409_RS19945 PF07670 Nucleoside recognition DN409_RS19950 PF01467 Cytidylyltransferase-like DN409_RS19965 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DN409_RS19970 PF06133 Control of competence regulator ComK, YlbF/YmcA DN409_RS19975 PF00300 Histidine phosphatase superfamily (branch 1) DN409_RS19980 PF14003 YlbE-like protein DN409_RS19985 PF14071 Putative coat protein DN409_RS19990 PF00188 Cysteine-rich secretory protein family DN409_RS19990 PF14504 CAP-associated N-terminal DN409_RS19995 PF08868 YugN-like family DN409_RS20000 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DN409_RS20005 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DN409_RS20010 PF00510 Cytochrome c oxidase subunit III DN409_RS20015 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN409_RS20020 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DN409_RS20020 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DN409_RS20020 PF00034 Cytochrome c DN409_RS20025 PF01040 UbiA prenyltransferase family DN409_RS20030 PF02628 Cytochrome oxidase assembly protein DN409_RS20035 PF02785 Biotin carboxylase C-terminal domain DN409_RS20035 PF00289 Biotin carboxylase, N-terminal domain DN409_RS20035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN409_RS20035 PF00364 Biotin-requiring enzyme DN409_RS20035 PF02436 Conserved carboxylase domain DN409_RS20035 PF00682 HMGL-like DN409_RS20045 PF01098 Cell cycle protein DN409_RS20050 PF07408 Protein of unknown function (DUF1507) DN409_RS20060 PF02562 PhoH-like protein DN409_RS20060 PF13638 PIN domain DN409_RS20070 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DN409_RS20080 PF14036 YlaH-like protein DN409_RS20085 PF03144 Elongation factor Tu domain 2 DN409_RS20085 PF00009 Elongation factor Tu GTP binding domain DN409_RS20085 PF14492 Elongation Factor G, domain II DN409_RS20085 PF00679 Elongation factor G C-terminus DN409_RS20095 PF00459 Inositol monophosphatase family DN409_RS20105 PF06335 Protein of unknown function (DUF1054) DN409_RS20110 PF05256 Uncharacterised protein family (UPF0223) DN409_RS20115 PF01276 Orn/Lys/Arg decarboxylase, major domain DN409_RS20115 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN409_RS20155 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS20155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN409_RS20160 PF02817 e3 binding domain DN409_RS20160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN409_RS20160 PF00364 Biotin-requiring enzyme DN409_RS20165 PF02780 Transketolase, C-terminal domain DN409_RS20165 PF02779 Transketolase, pyrimidine binding domain DN409_RS20170 PF00676 Dehydrogenase E1 component DN409_RS20180 PF01327 Polypeptide deformylase DN409_RS20195 PF07288 Protein of unknown function (DUF1447) DN409_RS20200 PF17770 Ribonuclease J C-terminal domain DN409_RS20200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN409_RS20200 PF00753 Metallo-beta-lactamase superfamily DN409_RS20205 PF02254 TrkA-N domain DN409_RS20205 PF02080 TrkA-C domain DN409_RS20215 PF01546 Peptidase family M20/M25/M40 DN409_RS20215 PF07687 Peptidase dimerisation domain DN409_RS20220 PF14602 Hexapeptide repeat of succinyl-transferase DN409_RS20220 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_RS20220 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DN409_RS20225 PF03466 LysR substrate binding domain DN409_RS20225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS20240 PF04308 Ribonuclease H-like DN409_RS20250 PF08796 Protein of unknown function (DUF1797) DN409_RS20265 PF00563 EAL domain DN409_RS20265 PF10388 EAL-domain associated signalling protein domain DN409_RS20275 PF00149 Calcineurin-like phosphoesterase DN409_RS20275 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN409_RS20285 PF13090 Polyphosphate kinase C-terminal domain 2 DN409_RS20285 PF13089 Polyphosphate kinase N-terminal domain DN409_RS20285 PF02503 Polyphosphate kinase middle domain DN409_RS20285 PF17941 Polyphosphate kinase C-terminal domain 1 DN409_RS20290 PF02541 Ppx/GppA phosphatase family DN409_RS20295 PF14177 YkyB-like protein DN409_RS20320 PF07690 Major Facilitator Superfamily DN409_RS20330 PF01717 Cobalamin-independent synthase, Catalytic domain DN409_RS20330 PF08267 Cobalamin-independent synthase, N-terminal domain DN409_RS20340 PF14040 Deoxyribonuclease NucA/NucB DN409_RS20350 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS20350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS20360 PF00155 Aminotransferase class I and II DN409_RS20365 PF00356 Bacterial regulatory proteins, lacI family DN409_RS20365 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN409_RS20370 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS20375 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS20380 PF13416 Bacterial extracellular solute-binding protein DN409_RS20385 PF00128 Alpha amylase, catalytic domain DN409_RS20385 PF16657 Maltogenic Amylase, C-terminal domain DN409_RS20385 PF02903 Alpha amylase, N-terminal ig-like domain DN409_RS20390 PF00128 Alpha amylase, catalytic domain DN409_RS20390 PF16657 Maltogenic Amylase, C-terminal domain DN409_RS20395 PF17912 MalK OB fold domain DN409_RS20395 PF00005 ABC transporter DN409_RS20395 PF03459 TOBE domain DN409_RS20440 PF02803 Thiolase, C-terminal domain DN409_RS20440 PF00108 Thiolase, N-terminal domain DN409_RS20445 PF00293 NUDIX domain DN409_RS20475 PF03551 Transcriptional regulator PadR-like family DN409_RS20490 PF01008 Initiation factor 2 subunit family DN409_RS20495 PF01636 Phosphotransferase enzyme family DN409_RS20500 PF00795 Carbon-nitrogen hydrolase DN409_RS20505 PF00155 Aminotransferase class I and II DN409_RS20510 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DN409_RS20510 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DN409_RS20520 PF00596 Class II Aldolase and Adducin N-terminal domain DN409_RS20525 PF03079 ARD/ARD' family DN409_RS20540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN409_RS20540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN409_RS20545 PF00144 Beta-lactamase DN409_RS20550 PF00990 Diguanylate cyclase, GGDEF domain DN409_RS20550 PF08448 PAS fold DN409_RS20555 PF00881 Nitroreductase family DN409_RS20570 PF02896 PEP-utilising enzyme, TIM barrel domain DN409_RS20570 PF00391 PEP-utilising enzyme, mobile domain DN409_RS20570 PF05524 PEP-utilising enzyme, N-terminal DN409_RS20575 PF00381 PTS HPr component phosphorylation site DN409_RS20580 PF02378 Phosphotransferase system, EIIC DN409_RS20580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN409_RS20580 PF00367 phosphotransferase system, EIIB DN409_RS20585 PF03123 CAT RNA binding domain DN409_RS20585 PF00874 PRD domain DN409_RS20595 PF00392 Bacterial regulatory proteins, gntR family DN409_RS20595 PF07702 UTRA domain DN409_RS20600 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DN409_RS20605 PF01979 Amidohydrolase family DN409_RS20615 PF04079 Segregation and condensation complex subunit ScpB DN409_RS20625 PF02616 Segregation and condensation protein ScpA DN409_RS20635 PF03745 Domain of unknown function (DUF309) DN409_RS20640 PF00583 Acetyltransferase (GNAT) family DN409_RS20645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN409_RS20650 PF06207 Protein of unknown function (DUF1002) DN409_RS20660 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_RS20665 PF14097 Stage V sporulation protein AE1 DN409_RS20670 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN409_RS20675 PF07451 Stage V sporulation protein AD (SpoVAD) DN409_RS20680 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN409_RS20685 PF13782 Stage V sporulation protein AB DN409_RS20690 PF12164 Stage V sporulation protein AA DN409_RS20700 PF04539 Sigma-70 region 3 DN409_RS20700 PF04542 Sigma-70 region 2 DN409_RS20700 PF04545 Sigma-70, region 4 DN409_RS20705 PF13581 Histidine kinase-like ATPase domain DN409_RS20710 PF01740 STAS domain DN409_RS20715 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_RS20715 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_RS20720 PF00392 Bacterial regulatory proteins, gntR family DN409_RS20725 PF00005 ABC transporter DN409_RS20745 PF01047 MarR family DN409_RS20755 PF00860 Permease family DN409_RS20760 PF01544 CorA-like Mg2+ transporter protein DN409_RS20765 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN409_RS20765 PF00591 Glycosyl transferase family, a/b domain DN409_RS20765 PF02885 Glycosyl transferase family, helical bundle domain DN409_RS20770 PF01048 Phosphorylase superfamily DN409_RS20775 PF01676 Metalloenzyme superfamily DN409_RS20780 PF13115 YtkA-like DN409_RS20785 PF02899 Phage integrase, N-terminal SAM-like domain DN409_RS20785 PF00589 Phage integrase family DN409_RS20790 PF14004 Protein of unknown function (DUF4227) DN409_RS20795 PF01475 Ferric uptake regulator family DN409_RS20800 PF01944 Stage II sporulation protein M DN409_RS20810 PF00293 NUDIX domain DN409_RS20815 PF13072 Mother cell inhibitor of FtsZ DN409_RS20820 PF00248 Aldo/keto reductase family DN409_RS20825 PF00248 Aldo/keto reductase family DN409_RS20830 PF04229 GrpB protein DN409_RS20830 PF13673 Acetyltransferase (GNAT) domain DN409_RS20840 PF02872 5'-nucleotidase, C-terminal domain DN409_RS20840 PF00746 LPXTG cell wall anchor motif DN409_RS20840 PF00149 Calcineurin-like phosphoesterase DN409_RS20840 PF00565 Staphylococcal nuclease homologue DN409_RS20850 PF12146 Serine aminopeptidase, S33 DN409_RS20855 PF13726 Na+-H+ antiporter family DN409_RS20855 PF03553 Na+/H+ antiporter family DN409_RS20860 PF00356 Bacterial regulatory proteins, lacI family DN409_RS20865 PF00583 Acetyltransferase (GNAT) family DN409_RS20870 PF12146 Serine aminopeptidase, S33 DN409_RS20875 PF10827 Protein of unknown function (DUF2552) DN409_RS20885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN409_RS20885 PF01872 RibD C-terminal domain DN409_RS20890 PF00677 Lumazine binding domain DN409_RS20895 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DN409_RS20895 PF00925 GTP cyclohydrolase II DN409_RS20905 PF00885 6,7-dimethyl-8-ribityllumazine synthase DN409_RS20915 PF04055 Radical SAM superfamily DN409_RS20915 PF06968 Biotin and Thiamin Synthesis associated domain DN409_RS20920 PF13847 Methyltransferase domain DN409_RS20925 PF12697 Alpha/beta hydrolase family DN409_RS20925 PF08241 Methyltransferase domain DN409_RS20930 PF00155 Aminotransferase class I and II DN409_RS20940 PF00202 Aminotransferase class-III DN409_RS20950 PF03553 Na+/H+ antiporter family DN409_RS20955 PF00149 Calcineurin-like phosphoesterase DN409_RS20955 PF02872 5'-nucleotidase, C-terminal domain DN409_RS20965 PF13404 AsnC-type helix-turn-helix domain DN409_RS20965 PF01037 Lrp/AsnC ligand binding domain DN409_RS20980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN409_RS20980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN409_RS20985 PF00202 Aminotransferase class-III DN409_RS20990 PF00696 Amino acid kinase family DN409_RS20995 PF01960 ArgJ family DN409_RS21000 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN409_RS21000 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN409_RS21010 PF00106 short chain dehydrogenase DN409_RS21015 PF00753 Metallo-beta-lactamase superfamily DN409_RS21020 PF03807 NADP oxidoreductase coenzyme F420-dependent DN409_RS21020 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN409_RS21025 PF03313 Serine dehydratase alpha chain DN409_RS21030 PF03315 Serine dehydratase beta chain DN409_RS21030 PF01842 ACT domain DN409_RS21040 PF12706 Beta-lactamase superfamily domain DN409_RS21040 PF00753 Metallo-beta-lactamase superfamily DN409_RS21075 PF00005 ABC transporter DN409_RS21090 PF00689 Cation transporting ATPase, C-terminus DN409_RS21090 PF00690 Cation transporter/ATPase, N-terminus DN409_RS21095 PF11798 IMS family HHH motif DN409_RS21095 PF11799 impB/mucB/samB family C-terminal domain DN409_RS21095 PF00817 impB/mucB/samB family DN409_RS21105 PF01546 Peptidase family M20/M25/M40 DN409_RS21105 PF07687 Peptidase dimerisation domain DN409_RS21110 PF13302 Acetyltransferase (GNAT) domain DN409_RS21125 PF03734 L,D-transpeptidase catalytic domain DN409_RS21130 PF11728 Putative aromatic acid exporter C-terminal domain DN409_RS21130 PF06081 Aromatic acid exporter family member 1 DN409_RS21135 PF00005 ABC transporter DN409_RS21140 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS21145 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_RS21150 PF06491 Disulphide isomerase DN409_RS21155 PF11208 Protein of unknown function (DUF2992) DN409_RS21160 PF09297 NADH pyrophosphatase zinc ribbon domain DN409_RS21160 PF00293 NUDIX domain DN409_RS21165 PF04239 Protein of unknown function (DUF421) DN409_RS21170 PF01098 Cell cycle protein DN409_RS21180 PF00364 Biotin-requiring enzyme DN409_RS21180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN409_RS21180 PF02817 e3 binding domain DN409_RS21185 PF02779 Transketolase, pyrimidine binding domain DN409_RS21185 PF02780 Transketolase, C-terminal domain DN409_RS21190 PF00676 Dehydrogenase E1 component DN409_RS21195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN409_RS21195 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS21200 PF00871 Acetokinase family DN409_RS21205 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN409_RS21205 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN409_RS21210 PF01515 Phosphate acetyl/butaryl transferase DN409_RS21220 PF02954 Bacterial regulatory protein, Fis family DN409_RS21220 PF00989 PAS fold DN409_RS21220 PF00158 Sigma-54 interaction domain DN409_RS21225 PF11118 Protein of unknown function (DUF2627) DN409_RS21230 PF03009 Glycerophosphoryl diester phosphodiesterase family DN409_RS21235 PF14174 YycC-like protein DN409_RS21265 PF04740 LXG domain of WXG superfamily DN409_RS21265 PF14436 Bacterial EndoU nuclease DN409_RS21275 PF00072 Response regulator receiver domain DN409_RS21275 PF08769 Sporulation initiation factor Spo0A C terminal DN409_RS21285 PF17820 PDZ domain DN409_RS21285 PF05580 SpoIVB peptidase S55 DN409_RS21290 PF13476 AAA domain DN409_RS21295 PF02863 Arginine repressor, C-terminal domain DN409_RS21295 PF01316 Arginine repressor, DNA binding domain DN409_RS21300 PF01728 FtsJ-like methyltransferase DN409_RS21300 PF01479 S4 domain DN409_RS21305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DN409_RS21305 PF02779 Transketolase, pyrimidine binding domain DN409_RS21305 PF02780 Transketolase, C-terminal domain DN409_RS21310 PF00348 Polyprenyl synthetase DN409_RS21315 PF02609 Exonuclease VII small subunit DN409_RS21320 PF02601 Exonuclease VII, large subunit DN409_RS21320 PF13742 OB-fold nucleic acid binding domain DN409_RS21325 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DN409_RS21325 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DN409_RS21330 PF01029 NusB family DN409_RS21335 PF03780 Asp23 family, cell envelope-related function DN409_RS21340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN409_RS21340 PF00289 Biotin carboxylase, N-terminal domain DN409_RS21340 PF02785 Biotin carboxylase C-terminal domain DN409_RS21345 PF00364 Biotin-requiring enzyme DN409_RS21355 PF12685 SpoIIIAH-like protein DN409_RS21365 PF09581 Stage III sporulation protein AF (Spore_III_AF) DN409_RS21370 PF09546 Stage III sporulation protein AE (spore_III_AE) DN409_RS21375 PF06686 Stage III sporulation protein AC/AD protein family DN409_RS21380 PF06686 Stage III sporulation protein AC/AD protein family DN409_RS21385 PF09548 Stage III sporulation protein AB (spore_III_AB) DN409_RS21410 PF09285 Elongation factor P, C-terminal DN409_RS21410 PF08207 Elongation factor P (EF-P) KOW-like domain DN409_RS21410 PF01132 Elongation factor P (EF-P) OB domain DN409_RS21415 PF00557 Metallopeptidase family M24 DN409_RS21415 PF01321 Creatinase/Prolidase N-terminal domain DN409_RS21420 PF01220 Dehydroquinase class II DN409_RS21425 PF11085 Conserved membrane protein YqhR DN409_RS21430 PF07136 Protein of unknown function (DUF1385) DN409_RS21440 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS21445 PF01325 Iron dependent repressor, N-terminal DNA binding domain DN409_RS21445 PF02742 Iron dependent repressor, metal binding and dimerisation domain DN409_RS21470 PF03099 Biotin/lipoate A/B protein ligase family DN409_RS21475 PF00581 Rhodanese-like domain DN409_RS21485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN409_RS21485 PF00356 Bacterial regulatory proteins, lacI family DN409_RS21495 PF00893 Small Multidrug Resistance protein DN409_RS21500 PF00893 Small Multidrug Resistance protein DN409_RS21530 PF00005 ABC transporter DN409_RS21535 PF00392 Bacterial regulatory proteins, gntR family DN409_RS21550 PF02347 Glycine cleavage system P-protein DN409_RS21555 PF02347 Glycine cleavage system P-protein DN409_RS21560 PF01571 Aminomethyltransferase folate-binding domain DN409_RS21560 PF08669 Glycine cleavage T-protein C-terminal barrel domain DN409_RS21565 PF00271 Helicase conserved C-terminal domain DN409_RS21565 PF00176 SNF2 family N-terminal domain DN409_RS21570 PF11079 Bacterial protein YqhG of unknown function DN409_RS21590 PF14038 YqzE-like protein DN409_RS21595 PF01202 Shikimate kinase DN409_RS21620 PF07963 Prokaryotic N-terminal methylation motif DN409_RS21630 PF00482 Type II secretion system (T2SS), protein F DN409_RS21635 PF00437 Type II/IV secretion system protein DN409_RS21645 PF11117 Protein of unknown function (DUF2626) DN409_RS21650 PF00375 Sodium:dicarboxylate symporter family DN409_RS21685 PF03033 Glycosyltransferase family 28 N-terminal domain DN409_RS21685 PF04101 Glycosyltransferase family 28 C-terminal domain DN409_RS21690 PF00809 Pterin binding enzyme DN409_RS21690 PF02574 Homocysteine S-methyltransferase DN409_RS21690 PF02965 Vitamin B12 dependent methionine synthase, activation domain DN409_RS21690 PF02607 B12 binding domain DN409_RS21690 PF02310 B12 binding domain DN409_RS21695 PF02574 Homocysteine S-methyltransferase DN409_RS21695 PF02219 Methylenetetrahydrofolate reductase DN409_RS21700 PF01053 Cys/Met metabolism PLP-dependent enzyme DN409_RS21705 PF01053 Cys/Met metabolism PLP-dependent enzyme DN409_RS21710 PF01022 Bacterial regulatory protein, arsR family DN409_RS21720 PF00753 Metallo-beta-lactamase superfamily DN409_RS21725 PF10958 Protein of unknown function (DUF2759) DN409_RS21730 PF00480 ROK family DN409_RS21735 PF06014 Bacterial protein of unknown function (DUF910) DN409_RS21740 PF01812 5-formyltetrahydrofolate cyclo-ligase family DN409_RS21745 PF00471 Ribosomal protein L33 DN409_RS21750 PF00483 Nucleotidyl transferase DN409_RS21755 PF01895 PhoU domain DN409_RS21760 PF00005 ABC transporter DN409_RS21765 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS21770 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS21775 PF12849 PBP superfamily domain DN409_RS21780 PF00905 Penicillin binding protein transpeptidase domain DN409_RS21780 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS21785 PF07690 Major Facilitator Superfamily DN409_RS21790 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN409_RS21790 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN409_RS21810 PF04551 GcpE protein DN409_RS21815 PF01475 Ferric uptake regulator family DN409_RS21820 PF00950 ABC 3 transport family DN409_RS21825 PF00005 ABC transporter DN409_RS21830 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS21830 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_RS21835 PF11116 Protein of unknown function (DUF2624) DN409_RS21840 PF01261 Xylose isomerase-like TIM barrel DN409_RS21845 PF00270 DEAD/DEAH box helicase DN409_RS21845 PF00271 Helicase conserved C-terminal domain DN409_RS21855 PF02401 LytB protein DN409_RS21860 PF01784 NIF3 (NGG1p interacting factor 3) DN409_RS21865 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DN409_RS21870 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN409_RS21875 PF03979 Sigma-70 factor, region 1.1 DN409_RS21875 PF00140 Sigma-70 factor, region 1.2 DN409_RS21875 PF04545 Sigma-70, region 4 DN409_RS21875 PF04539 Sigma-70 region 3 DN409_RS21875 PF04542 Sigma-70 region 2 DN409_RS21880 PF01807 CHC2 zinc finger DN409_RS21880 PF10410 DnaB-helicase binding domain of primase DN409_RS21880 PF08275 DNA primase catalytic core, N-terminal domain DN409_RS21890 PF03618 Kinase/pyrophosphorylase DN409_RS21895 PF08279 HTH domain DN409_RS21895 PF00571 CBS domain DN409_RS21900 PF11967 Recombination protein O N terminal DN409_RS21900 PF02565 Recombination protein O C terminal DN409_RS21910 PF07650 KH domain DN409_RS21910 PF01926 50S ribosome-binding GTPase DN409_RS21915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN409_RS21920 PF01219 Prokaryotic diacylglycerol kinase DN409_RS21925 PF02130 Uncharacterized protein family UPF0054 DN409_RS21930 PF07697 7TM-HD extracellular DN409_RS21930 PF07698 7TM receptor with intracellular HD hydrolase DN409_RS21930 PF01966 HD domain DN409_RS21935 PF02562 PhoH-like protein DN409_RS21940 PF06898 Putative stage IV sporulation protein YqfD DN409_RS21945 PF07873 YabP family DN409_RS21950 PF09424 Yqey-like protein DN409_RS21955 PF01165 Ribosomal protein S21 DN409_RS21960 PF01938 TRAM domain DN409_RS21960 PF04055 Radical SAM superfamily DN409_RS21960 PF00919 Uncharacterized protein family UPF0004 DN409_RS21965 PF04452 RNA methyltransferase DN409_RS21975 PF01556 DnaJ C terminal domain DN409_RS21975 PF00684 DnaJ central domain DN409_RS21975 PF00226 DnaJ domain DN409_RS21980 PF00012 Hsp70 protein DN409_RS21985 PF01025 GrpE DN409_RS21990 PF01628 HrcA protein C terminal domain DN409_RS21995 PF04055 Radical SAM superfamily DN409_RS21995 PF06969 HemN C-terminal domain DN409_RS22000 PF01638 HxlR-like helix-turn-helix DN409_RS22005 PF06421 GTP-binding protein LepA C-terminus DN409_RS22005 PF00009 Elongation factor Tu GTP binding domain DN409_RS22005 PF00679 Elongation factor G C-terminus DN409_RS22005 PF03144 Elongation factor Tu domain 2 DN409_RS22015 PF03418 Germination protease DN409_RS22020 PF01649 Ribosomal protein S20 DN409_RS22025 PF06144 DNA polymerase III, delta subunit DN409_RS22030 PF14141 YqzM-like protein DN409_RS22040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN409_RS22045 PF10531 SLBB domain DN409_RS22050 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN409_RS22050 PF03807 NADP oxidoreductase coenzyme F420-dependent DN409_RS22055 PF13649 Methyltransferase domain DN409_RS22065 PF01966 HD domain DN409_RS22070 PF01467 Cytidylyltransferase-like DN409_RS22075 PF01985 CRS1 / YhbY (CRM) domain DN409_RS22080 PF01488 Shikimate / quinate 5-dehydrogenase DN409_RS22080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DN409_RS22080 PF08501 Shikimate dehydrogenase substrate binding domain DN409_RS22085 PF01926 50S ribosome-binding GTPase DN409_RS22100 PF02666 Phosphatidylserine decarboxylase DN409_RS22105 PF04542 Sigma-70 region 2 DN409_RS22105 PF04545 Sigma-70, region 4 DN409_RS22115 PF04607 Region found in RelA / SpoT proteins DN409_RS22125 PF00245 Alkaline phosphatase DN409_RS22135 PF08386 TAP-like protein DN409_RS22135 PF00561 alpha/beta hydrolase fold DN409_RS22170 PF13860 FlgD Ig-like domain DN409_RS22170 PF02225 PA domain DN409_RS22170 PF05922 Peptidase inhibitor I9 DN409_RS22170 PF00082 Subtilase family DN409_RS22175 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DN409_RS22180 PF01329 Pterin 4 alpha carbinolamine dehydratase DN409_RS22185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_RS22190 PF07681 DoxX DN409_RS22220 PF00005 ABC transporter DN409_RS22225 PF01032 FecCD transport family DN409_RS22230 PF01497 Periplasmic binding protein DN409_RS22235 PF14143 YrhC-like protein DN409_RS22240 PF00171 Aldehyde dehydrogenase family DN409_RS22240 PF00465 Iron-containing alcohol dehydrogenase DN409_RS22245 PF01053 Cys/Met metabolism PLP-dependent enzyme DN409_RS22250 PF00291 Pyridoxal-phosphate dependent enzyme DN409_RS22255 PF01048 Phosphorylase superfamily DN409_RS22260 PF08241 Methyltransferase domain DN409_RS22265 PF10750 Protein of unknown function (DUF2536) DN409_RS22275 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS22275 PF00905 Penicillin binding protein transpeptidase domain DN409_RS22280 PF03449 Transcription elongation factor, N-terminal DN409_RS22280 PF01272 Transcription elongation factor, GreA/GreB, C-term DN409_RS22285 PF00485 Phosphoribulokinase / Uridine kinase family DN409_RS22290 PF01136 Peptidase family U32 DN409_RS22290 PF16325 Peptidase family U32 C-terminal domain DN409_RS22295 PF01136 Peptidase family U32 DN409_RS22300 PF01596 O-methyltransferase DN409_RS22305 PF02618 YceG-like family DN409_RS22310 PF06949 Protein of unknown function (DUF1292) DN409_RS22315 PF03652 Holliday junction resolvase DN409_RS22320 PF06135 IreB regulatory phosphoprotein DN409_RS22325 PF02272 DHHA1 domain DN409_RS22325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN409_RS22325 PF01411 tRNA synthetases class II (A) DN409_RS22335 PF01594 AI-2E family transporter DN409_RS22355 PF14490 Helix-hairpin-helix containing domain DN409_RS22355 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DN409_RS22355 PF13538 UvrD-like helicase C-terminal domain DN409_RS22370 PF00266 Aminotransferase class-V DN409_RS22375 PF02082 Transcriptional regulator DN409_RS22380 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN409_RS22380 PF12002 MgsA AAA+ ATPase C terminal DN409_RS22380 PF16193 AAA C-terminal domain DN409_RS22390 PF00899 ThiF family DN409_RS22395 PF00152 tRNA synthetases class II (D, K and N) DN409_RS22395 PF01336 OB-fold nucleic acid binding domain DN409_RS22395 PF02938 GAD domain DN409_RS22400 PF03129 Anticodon binding domain DN409_RS22400 PF13393 Histidyl-tRNA synthetase DN409_RS22405 PF02580 D-Tyr-tRNA(Tyr) deacylase DN409_RS22410 PF13291 ACT domain DN409_RS22410 PF04607 Region found in RelA / SpoT proteins DN409_RS22410 PF02824 TGS domain DN409_RS22415 PF00156 Phosphoribosyl transferase domain DN409_RS22420 PF17768 RecJ OB domain DN409_RS22420 PF01368 DHH family DN409_RS22420 PF02272 DHHA1 domain DN409_RS22420 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DN409_RS22425 PF01545 Cation efflux family DN409_RS22425 PF16916 Dimerisation domain of Zinc Transporter DN409_RS22430 PF07549 SecD/SecF GG Motif DN409_RS22430 PF02355 Protein export membrane protein DN409_RS22440 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_RS22440 PF01943 Polysaccharide biosynthesis protein DN409_RS22445 PF04239 Protein of unknown function (DUF421) DN409_RS22455 PF02699 Preprotein translocase subunit DN409_RS22460 PF01702 Queuine tRNA-ribosyltransferase DN409_RS22465 PF02547 Queuosine biosynthesis protein DN409_RS22470 PF11146 Protein of unknown function (DUF2905) DN409_RS22475 PF17864 RuvB AAA lid domain DN409_RS22475 PF05491 RuvB C-terminal winged helix domain DN409_RS22475 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN409_RS22480 PF07499 RuvA, C-terminal domain DN409_RS22480 PF01330 RuvA N terminal domain DN409_RS22485 PF01497 Periplasmic binding protein DN409_RS22505 PF01476 LysM domain DN409_RS22510 PF02445 Quinolinate synthetase A protein DN409_RS22515 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DN409_RS22515 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DN409_RS22520 PF02910 Fumarate reductase flavoprotein C-term DN409_RS22520 PF00890 FAD binding domain DN409_RS22525 PF00266 Aminotransferase class-V DN409_RS22530 PF08279 HTH domain DN409_RS22530 PF02829 3H domain DN409_RS22535 PF03475 3-alpha domain DN409_RS22535 PF03473 MOSC domain DN409_RS22540 PF01842 ACT domain DN409_RS22540 PF00800 Prephenate dehydratase DN409_RS22545 PF02687 FtsX-like permease family DN409_RS22550 PF02687 FtsX-like permease family DN409_RS22555 PF00005 ABC transporter DN409_RS22560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS22565 PF00072 Response regulator receiver domain DN409_RS22565 PF00486 Transcriptional regulatory protein, C terminal DN409_RS22570 PF01018 GTP1/OBG DN409_RS22570 PF01926 50S ribosome-binding GTPase DN409_RS22570 PF09269 Domain of unknown function (DUF1967) DN409_RS22575 PF14682 Sporulation initiation phospho-transferase B, C-terminal DN409_RS22575 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN409_RS22580 PF01016 Ribosomal L27 protein DN409_RS22585 PF04327 Cysteine protease Prp DN409_RS22590 PF00829 Ribosomal prokaryotic L21 protein DN409_RS22595 PF10150 Ribonuclease E/G family DN409_RS22595 PF00575 S1 RNA binding domain DN409_RS22605 PF02163 Peptidase family M50 DN409_RS22610 PF01551 Peptidase family M23 DN409_RS22615 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN409_RS22620 PF03775 Septum formation inhibitor MinC, C-terminal domain DN409_RS22630 PF04085 rod shape-determining protein MreC DN409_RS22640 PF04002 RadC-like JAB domain DN409_RS22645 PF02545 Maf-like protein DN409_RS22660 PF02875 Mur ligase family, glutamate ligase domain DN409_RS22660 PF08245 Mur ligase middle domain DN409_RS22665 PF00133 tRNA synthetases class I (I, L, M and V) DN409_RS22665 PF10458 Valyl tRNA synthetase tRNA binding arm DN409_RS22665 PF08264 Anticodon-binding domain of tRNA DN409_RS22675 PF01476 LysM domain DN409_RS22680 PF00202 Aminotransferase class-III DN409_RS22685 PF00490 Delta-aminolevulinic acid dehydratase DN409_RS22690 PF02602 Uroporphyrinogen-III synthase HemD DN409_RS22695 PF03900 Porphobilinogen deaminase, C-terminal domain DN409_RS22695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DN409_RS22700 PF01578 Cytochrome C assembly protein DN409_RS22705 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DN409_RS22705 PF01488 Shikimate / quinate 5-dehydrogenase DN409_RS22705 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DN409_RS22710 PF01047 MarR family DN409_RS22715 PF02566 OsmC-like protein DN409_RS22720 PF01926 50S ribosome-binding GTPase DN409_RS22725 PF05362 Lon protease (S16) C-terminal proteolytic domain DN409_RS22725 PF00004 ATPase family associated with various cellular activities (AAA) DN409_RS22725 PF02190 ATP-dependent protease La (LON) substrate-binding domain DN409_RS22730 PF00004 ATPase family associated with various cellular activities (AAA) DN409_RS22730 PF05362 Lon protease (S16) C-terminal proteolytic domain DN409_RS22735 PF10431 C-terminal, D2-small domain, of ClpB protein DN409_RS22735 PF06689 ClpX C4-type zinc finger DN409_RS22735 PF07724 AAA domain (Cdc48 subfamily) DN409_RS22740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN409_RS22740 PF05697 Bacterial trigger factor protein (TF) DN409_RS22740 PF05698 Bacterial trigger factor protein (TF) C-terminus DN409_RS22755 PF08000 Bacterial PH domain DN409_RS22755 PF11724 YvbH-like oligomerisation region DN409_RS22825 PF00589 Phage integrase family DN409_RS22850 PF02899 Phage integrase, N-terminal SAM-like domain DN409_RS22850 PF00589 Phage integrase family DN409_RS22865 PF12850 Calcineurin-like phosphoesterase superfamily domain DN409_RS22870 PF01725 Ham1 family DN409_RS22875 PF01138 3' exoribonuclease family, domain 1 DN409_RS22875 PF03725 3' exoribonuclease family, domain 2 DN409_RS22880 PF10646 Sporulation and spore germination DN409_RS22885 PF01177 Asp/Glu/Hydantoin racemase DN409_RS22890 PF00196 Bacterial regulatory proteins, luxR family DN409_RS22895 PF00860 Permease family DN409_RS22900 PF07969 Amidohydrolase family DN409_RS22905 PF04024 PspC domain DN409_RS22910 PF01381 Helix-turn-helix DN409_RS22910 PF07883 Cupin domain DN409_RS22915 PF13536 Putative multidrug resistance efflux transporter DN409_RS22920 PF00230 Major intrinsic protein DN409_RS22925 PF02082 Transcriptional regulator DN409_RS22935 PF00005 ABC transporter DN409_RS22935 PF13732 Domain of unknown function (DUF4162) DN409_RS22940 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DN409_RS22945 PF00691 OmpA family DN409_RS22945 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN409_RS22950 PF01618 MotA/TolQ/ExbB proton channel family DN409_RS22960 PF02557 D-alanyl-D-alanine carboxypeptidase DN409_RS22965 PF03061 Thioesterase superfamily DN409_RS22970 PF13085 2Fe-2S iron-sulfur cluster binding domain DN409_RS22970 PF13183 4Fe-4S dicluster domain DN409_RS22975 PF00890 FAD binding domain DN409_RS22975 PF02910 Fumarate reductase flavoprotein C-term DN409_RS22980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DN409_RS22985 PF10702 Protein of unknown function (DUF2507) DN409_RS22990 PF02151 UvrB/uvrC motif DN409_RS22990 PF01541 GIY-YIG catalytic domain DN409_RS22990 PF08459 UvrC Helix-hairpin-helix N-terminal DN409_RS22995 PF00085 Thioredoxin DN409_RS23000 PF00766 Electron transfer flavoprotein FAD-binding domain DN409_RS23000 PF01012 Electron transfer flavoprotein domain DN409_RS23005 PF01012 Electron transfer flavoprotein domain DN409_RS23010 PF00378 Enoyl-CoA hydratase/isomerase DN409_RS23015 PF08359 YsiA-like protein, C-terminal region DN409_RS23015 PF00440 Bacterial regulatory proteins, tetR family DN409_RS23020 PF00501 AMP-binding enzyme DN409_RS23020 PF13193 AMP-binding enzyme C-terminal domain DN409_RS23035 PF05163 DinB family DN409_RS23055 PF00005 ABC transporter DN409_RS23060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS23060 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS23065 PF00072 Response regulator receiver domain DN409_RS23065 PF00486 Transcriptional regulatory protein, C terminal DN409_RS23070 PF09962 Uncharacterized conserved protein (DUF2196) DN409_RS23075 PF17785 PUA-like domain DN409_RS23075 PF10672 S-adenosylmethionine-dependent methyltransferase DN409_RS23085 PF03992 Antibiotic biosynthesis monooxygenase DN409_RS23090 PF04203 Sortase domain DN409_RS23095 PF00005 ABC transporter DN409_RS23100 PF01032 FecCD transport family DN409_RS23105 PF01497 Periplasmic binding protein DN409_RS23110 PF05031 Iron Transport-associated domain DN409_RS23120 PF05031 Iron Transport-associated domain DN409_RS23125 PF05525 Branched-chain amino acid transport protein DN409_RS23130 PF01479 S4 domain DN409_RS23130 PF00849 RNA pseudouridylate synthase DN409_RS23135 PF00488 MutS domain V DN409_RS23135 PF01713 Smr domain DN409_RS23140 PF14791 DNA polymerase beta thumb DN409_RS23140 PF14716 Helix-hairpin-helix domain DN409_RS23140 PF02811 PHP domain DN409_RS23145 PF02674 Colicin V production protein DN409_RS23150 PF05164 Cell division protein ZapA DN409_RS23155 PF11858 Domain of unknown function (DUF3378) DN409_RS23155 PF01351 Ribonuclease HII DN409_RS23175 PF00152 tRNA synthetases class II (D, K and N) DN409_RS23175 PF01336 OB-fold nucleic acid binding domain DN409_RS23180 PF01588 Putative tRNA binding domain DN409_RS23180 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DN409_RS23180 PF03484 tRNA synthetase B5 domain DN409_RS23180 PF03147 Ferredoxin-fold anticodon binding domain DN409_RS23180 PF03483 B3/4 domain DN409_RS23185 PF01409 tRNA synthetases class II core domain (F) DN409_RS23185 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DN409_RS23190 PF00588 SpoU rRNA Methylase family DN409_RS23190 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN409_RS23195 PF14098 Small, acid-soluble spore protein I DN409_RS23200 PF01966 HD domain DN409_RS23225 PF07690 Major Facilitator Superfamily DN409_RS23235 PF16859 Tetracyclin repressor-like, C-terminal domain DN409_RS23235 PF00440 Bacterial regulatory proteins, tetR family DN409_RS23240 PF05343 M42 glutamyl aminopeptidase DN409_RS23250 PF00453 Ribosomal protein L20 DN409_RS23255 PF01632 Ribosomal protein L35 DN409_RS23260 PF00707 Translation initiation factor IF-3, C-terminal domain DN409_RS23260 PF05198 Translation initiation factor IF-3, N-terminal domain DN409_RS23265 PF03129 Anticodon binding domain DN409_RS23265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_RS23265 PF02824 TGS domain DN409_RS23265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN409_RS23270 PF08812 YtxC-like family DN409_RS23275 PF07319 Primosomal protein DnaI N-terminus DN409_RS23275 PF01695 IstB-like ATP binding protein DN409_RS23280 PF07261 Replication initiation and membrane attachment DN409_RS23285 PF03477 ATP cone domain DN409_RS23290 PF02675 S-adenosylmethionine decarboxylase DN409_RS23295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN409_RS23295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN409_RS23300 PF01121 Dephospho-CoA kinase DN409_RS23305 PF02659 Putative manganese efflux pump DN409_RS23310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DN409_RS23310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DN409_RS23310 PF06827 Zinc finger found in FPG and IleRS DN409_RS23315 PF00476 DNA polymerase family A DN409_RS23315 PF01367 5'-3' exonuclease, C-terminal SAM fold DN409_RS23315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN409_RS23320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS23320 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS23320 PF16736 Single Cache-like DN409_RS23320 PF00989 PAS fold DN409_RS23325 PF00486 Transcriptional regulatory protein, C terminal DN409_RS23325 PF00072 Response regulator receiver domain DN409_RS23340 PF00056 lactate/malate dehydrogenase, NAD binding domain DN409_RS23340 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN409_RS23345 PF00180 Isocitrate/isopropylmalate dehydrogenase DN409_RS23350 PF00285 Citrate synthase, C-terminal domain DN409_RS23360 PF04284 Protein of unknown function (DUF441) DN409_RS23365 PF01594 AI-2E family transporter DN409_RS23370 PF04186 FxsA cytoplasmic membrane protein DN409_RS23375 PF00224 Pyruvate kinase, barrel domain DN409_RS23375 PF02887 Pyruvate kinase, alpha/beta domain DN409_RS23375 PF00391 PEP-utilising enzyme, mobile domain DN409_RS23380 PF00365 Phosphofructokinase DN409_RS23385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DN409_RS23390 PF17848 Acetyl-coA carboxylase zinc finger domain DN409_RS23390 PF01039 Carboxyl transferase domain DN409_RS23395 PF00392 Bacterial regulatory proteins, gntR family DN409_RS23400 PF03949 Malic enzyme, NAD binding domain DN409_RS23400 PF00390 Malic enzyme, N-terminal domain DN409_RS23405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN409_RS23405 PF14579 Helix-hairpin-helix motif DN409_RS23405 PF02811 PHP domain DN409_RS23405 PF01336 OB-fold nucleic acid binding domain DN409_RS23405 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN409_RS23410 PF14034 Sporulation protein YtrH DN409_RS23420 PF02272 DHHA1 domain DN409_RS23420 PF01368 DHH family DN409_RS23440 PF01636 Phosphotransferase enzyme family DN409_RS23450 PF03061 Thioesterase superfamily DN409_RS23450 PF00571 CBS domain DN409_RS23450 PF00392 Bacterial regulatory proteins, gntR family DN409_RS23450 PF07085 DRTGG domain DN409_RS23460 PF01321 Creatinase/Prolidase N-terminal domain DN409_RS23460 PF00557 Metallopeptidase family M24 DN409_RS23485 PF07883 Cupin domain DN409_RS23495 PF01381 Helix-turn-helix DN409_RS23505 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN409_RS23505 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN409_RS23515 PF00582 Universal stress protein family DN409_RS23535 PF14698 Argininosuccinate lyase C-terminal DN409_RS23535 PF00206 Lyase DN409_RS23540 PF00764 Arginosuccinate synthase DN409_RS23555 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS23555 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_RS23560 PF12787 EcsC protein family DN409_RS23575 PF00871 Acetokinase family DN409_RS23580 PF02384 N-6 DNA Methylase DN409_RS23585 PF08534 Redoxin DN409_RS23590 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN409_RS23600 PF01513 ATP-NAD kinase DN409_RS23605 PF07969 Amidohydrolase family DN409_RS23615 PF13193 AMP-binding enzyme C-terminal domain DN409_RS23615 PF00501 AMP-binding enzyme DN409_RS23620 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_RS23625 PF02568 Thiamine biosynthesis protein (ThiI) DN409_RS23625 PF02926 THUMP domain DN409_RS23630 PF00266 Aminotransferase class-V DN409_RS23640 PF06160 Septation ring formation regulator, EzrA DN409_RS23650 PF00440 Bacterial regulatory proteins, tetR family DN409_RS23655 PF13185 GAF domain DN409_RS23660 PF01053 Cys/Met metabolism PLP-dependent enzyme DN409_RS23665 PF00163 Ribosomal protein S4/S9 N-terminal domain DN409_RS23665 PF01479 S4 domain DN409_RS23680 PF01479 S4 domain DN409_RS23680 PF00579 tRNA synthetases class I (W and Y) DN409_RS23690 PF04542 Sigma-70 region 2 DN409_RS23690 PF08281 Sigma-70, region 4 DN409_RS23700 PF12464 Maltose acetyltransferase DN409_RS23700 PF14602 Hexapeptide repeat of succinyl-transferase DN409_RS23705 PF00583 Acetyltransferase (GNAT) family DN409_RS23710 PF00501 AMP-binding enzyme DN409_RS23710 PF13193 AMP-binding enzyme C-terminal domain DN409_RS23715 PF00583 Acetyltransferase (GNAT) family DN409_RS23720 PF00571 CBS domain DN409_RS23725 PF00850 Histone deacetylase domain DN409_RS23730 PF00561 alpha/beta hydrolase fold DN409_RS23740 PF00072 Response regulator receiver domain DN409_RS23740 PF00486 Transcriptional regulatory protein, C terminal DN409_RS23745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS23745 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS23745 PF00989 PAS fold DN409_RS23745 PF16736 Single Cache-like DN409_RS23750 PF12796 Ankyrin repeats (3 copies) DN409_RS23755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN409_RS23760 PF01741 Large-conductance mechanosensitive channel, MscL DN409_RS23780 PF00356 Bacterial regulatory proteins, lacI family DN409_RS23785 PF01817 Chorismate mutase type II DN409_RS23785 PF00793 DAHP synthetase I family DN409_RS23790 PF00793 DAHP synthetase I family DN409_RS23790 PF01817 Chorismate mutase type II DN409_RS23795 PF07537 CamS sex pheromone cAM373 precursor DN409_RS23800 PF11009 Protein of unknown function (DUF2847) DN409_RS23810 PF02073 Thermophilic metalloprotease (M29) DN409_RS23830 PF13302 Acetyltransferase (GNAT) domain DN409_RS23835 PF08245 Mur ligase middle domain DN409_RS23835 PF02875 Mur ligase family, glutamate ligase domain DN409_RS23835 PF01225 Mur ligase family, catalytic domain DN409_RS23845 PF17854 FtsK alpha domain DN409_RS23845 PF09397 Ftsk gamma domain DN409_RS23845 PF01580 FtsK/SpoIIIE family DN409_RS23850 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_RS23850 PF08239 Bacterial SH3 domain DN409_RS23860 PF14794 Domain of unknown function (DUF4479) DN409_RS23860 PF01588 Putative tRNA binding domain DN409_RS23865 PF07285 Protein of unknown function (DUF1444) DN409_RS23870 PF00085 Thioredoxin DN409_RS23875 PF01931 Protein of unknown function DUF84 DN409_RS23880 PF05343 M42 glutamyl aminopeptidase DN409_RS23890 PF00753 Metallo-beta-lactamase superfamily DN409_RS23895 PF02390 Putative methyltransferase DN409_RS23900 PF14165 YtzH-like protein DN409_RS23905 PF01636 Phosphotransferase enzyme family DN409_RS23910 PF17999 Pullulanase N1-terminal domain DN409_RS23910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN409_RS23910 PF00128 Alpha amylase, catalytic domain DN409_RS23915 PF02834 LigT like Phosphoesterase DN409_RS23920 PF01546 Peptidase family M20/M25/M40 DN409_RS23925 PF08220 DeoR-like helix-turn-helix domain DN409_RS23930 PF00849 RNA pseudouridylate synthase DN409_RS23930 PF01479 S4 domain DN409_RS23935 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_RS23935 PF01943 Polysaccharide biosynthesis protein DN409_RS23945 PF07690 Major Facilitator Superfamily DN409_RS23950 PF01022 Bacterial regulatory protein, arsR family DN409_RS23955 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DN409_RS23965 PF10957 Sporulation protein Cse60 DN409_RS23975 PF02559 CarD-like/TRCF domain DN409_RS23985 PF06800 Sugar transport protein DN409_RS24000 PF02391 MoaE protein DN409_RS24005 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DN409_RS24010 PF00994 Probable molybdopterin binding domain DN409_RS24010 PF03453 MoeA N-terminal region (domain I and II) DN409_RS24010 PF03454 MoeA C-terminal region (domain IV) DN409_RS24015 PF01967 MoaC family DN409_RS24020 PF00899 ThiF family DN409_RS24025 PF04055 Radical SAM superfamily DN409_RS24025 PF06463 Molybdenum Cofactor Synthesis C DN409_RS24050 PF00581 Rhodanese-like domain DN409_RS24060 PF00561 alpha/beta hydrolase fold DN409_RS24065 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_RS24070 PF03845 Spore germination protein DN409_RS24075 PF05504 Spore germination B3/ GerAC like, C-terminal DN409_RS24100 PF08264 Anticodon-binding domain of tRNA DN409_RS24100 PF00133 tRNA synthetases class I (I, L, M and V) DN409_RS24100 PF09334 tRNA synthetases class I (M) DN409_RS24100 PF13603 Leucyl-tRNA synthetase, Domain 2 DN409_RS24105 PF07690 Major Facilitator Superfamily DN409_RS24110 PF00999 Sodium/hydrogen exchanger family DN409_RS24115 PF02080 TrkA-C domain DN409_RS24120 PF00589 Phage integrase family DN409_RS24135 PF00005 ABC transporter DN409_RS24145 PF10732 Protein of unknown function (DUF2524) DN409_RS24150 PF16199 Radical_SAM C-terminal domain DN409_RS24150 PF04055 Radical SAM superfamily DN409_RS24155 PF06962 Putative rRNA methylase DN409_RS24170 PF10776 Protein of unknown function (DUF2600) DN409_RS24175 PF12146 Serine aminopeptidase, S33 DN409_RS24180 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_RS24185 PF01569 PAP2 superfamily DN409_RS24190 PF13439 Glycosyltransferase Family 4 DN409_RS24190 PF00534 Glycosyl transferases group 1 DN409_RS24200 PF07282 Putative transposase DNA-binding domain DN409_RS24200 PF01385 Probable transposase DN409_RS24200 PF12323 Helix-turn-helix domain DN409_RS24205 PF12804 MobA-like NTP transferase domain DN409_RS24210 PF00994 Probable molybdopterin binding domain DN409_RS24225 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN409_RS24225 PF02772 S-adenosylmethionine synthetase, central domain DN409_RS24225 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN409_RS24230 PF01293 Phosphoenolpyruvate carboxykinase DN409_RS24275 PF13426 PAS domain DN409_RS24275 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS24275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS24275 PF00989 PAS fold DN409_RS24275 PF13188 PAS domain DN409_RS24280 PF02743 Cache domain DN409_RS24280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS24280 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS24285 PF00199 Catalase DN409_RS24285 PF06628 Catalase-related immune-responsive DN409_RS24285 PF18011 C-terminal domain found in long catalases DN409_RS24290 PF00561 alpha/beta hydrolase fold DN409_RS24290 PF08386 TAP-like protein DN409_RS24300 PF00884 Sulfatase DN409_RS24310 PF09962 Uncharacterized conserved protein (DUF2196) DN409_RS24330 PF00005 ABC transporter DN409_RS24335 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS24350 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS24355 PF00293 NUDIX domain DN409_RS24400 PF00893 Small Multidrug Resistance protein DN409_RS24405 PF00893 Small Multidrug Resistance protein DN409_RS24410 PF09278 MerR, DNA binding DN409_RS24410 PF00376 MerR family regulatory protein DN409_RS24415 PF02664 S-Ribosylhomocysteinase (LuxS) DN409_RS24420 PF01809 Putative membrane protein insertion efficiency factor DN409_RS24425 PF00484 Carbonic anhydrase DN409_RS24430 PF01654 Cytochrome bd terminal oxidase subunit I DN409_RS24435 PF02322 Cytochrome bd terminal oxidase subunit II DN409_RS24440 PF10676 Spore germination protein gerPA/gerPF DN409_RS24455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_RS24455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS24475 PF04012 PspA/IM30 family DN409_RS24490 PF07664 Ferrous iron transport protein B C terminus DN409_RS24490 PF17910 FeoB cytosolic helical domain DN409_RS24490 PF07670 Nucleoside recognition DN409_RS24490 PF02421 Ferrous iron transport protein B DN409_RS24500 PF09515 Thiamine transporter protein (Thia_YuaJ) DN409_RS24505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS24505 PF00672 HAMP domain DN409_RS24505 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS24510 PF00072 Response regulator receiver domain DN409_RS24510 PF00486 Transcriptional regulatory protein, C terminal DN409_RS24535 PF00156 Phosphoribosyl transferase domain DN409_RS24540 PF00781 Diacylglycerol kinase catalytic domain DN409_RS24580 PF09335 SNARE associated Golgi protein DN409_RS24585 PF00398 Ribosomal RNA adenine dimethylase DN409_RS24595 PF02687 FtsX-like permease family DN409_RS24600 PF00005 ABC transporter DN409_RS24605 PF06445 GyrI-like small molecule binding domain DN409_RS24605 PF12833 Helix-turn-helix domain DN409_RS24615 PF00005 ABC transporter DN409_RS24620 PF07853 Protein of unknown function (DUF1648) DN409_RS24620 PF13630 SdpI/YhfL protein family DN409_RS24625 PF01022 Bacterial regulatory protein, arsR family DN409_RS24630 PF00486 Transcriptional regulatory protein, C terminal DN409_RS24630 PF00072 Response regulator receiver domain DN409_RS24635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS24640 PF02687 FtsX-like permease family DN409_RS24645 PF02687 FtsX-like permease family DN409_RS24650 PF00005 ABC transporter DN409_RS24655 PF02687 FtsX-like permease family DN409_RS24665 PF02447 GntP family permease DN409_RS24670 PF00392 Bacterial regulatory proteins, gntR family DN409_RS24670 PF07702 UTRA domain DN409_RS24680 PF07071 KDGP aldolase DN409_RS24685 PF03841 L-seryl-tRNA selenium transferase DN409_RS24690 PF01979 Amidohydrolase family DN409_RS24695 PF02557 D-alanyl-D-alanine carboxypeptidase DN409_RS24700 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS24700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS24705 PF00072 Response regulator receiver domain DN409_RS24705 PF00486 Transcriptional regulatory protein, C terminal DN409_RS24710 PF13378 Enolase C-terminal domain-like DN409_RS24710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN409_RS24715 PF00501 AMP-binding enzyme DN409_RS24715 PF13193 AMP-binding enzyme C-terminal domain DN409_RS24720 PF00378 Enoyl-CoA hydratase/isomerase DN409_RS24725 PF12697 Alpha/beta hydrolase family DN409_RS24730 PF16582 Middle domain of thiamine pyrophosphate DN409_RS24730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_RS24730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_RS24735 PF00425 chorismate binding enzyme DN409_RS24740 PF01040 UbiA prenyltransferase family DN409_RS24745 PF01258 Prokaryotic dksA/traR C4-type zinc finger DN409_RS24750 PF00313 'Cold-shock' DNA-binding domain DN409_RS24760 PF13411 MerR HTH family regulatory protein DN409_RS24770 PF00343 Carbohydrate phosphorylase DN409_RS24775 PF00534 Glycosyl transferases group 1 DN409_RS24775 PF08323 Starch synthase catalytic domain DN409_RS24780 PF00483 Nucleotidyl transferase DN409_RS24785 PF00483 Nucleotidyl transferase DN409_RS24790 PF00128 Alpha amylase, catalytic domain DN409_RS24790 PF02806 Alpha amylase, C-terminal all-beta domain DN409_RS24790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN409_RS24800 PF00056 lactate/malate dehydrogenase, NAD binding domain DN409_RS24800 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN409_RS24940 PF02308 MgtC family DN409_RS24945 PF07885 Ion channel DN409_RS24945 PF02254 TrkA-N domain DN409_RS24950 PF08868 YugN-like family DN409_RS24955 PF00342 Phosphoglucose isomerase DN409_RS24965 PF04070 Domain of unknown function (DUF378) DN409_RS24970 PF00575 S1 RNA binding domain DN409_RS24975 PF00155 Aminotransferase class I and II DN409_RS24980 PF01037 Lrp/AsnC ligand binding domain DN409_RS24985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN409_RS24985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN409_RS24990 PF08386 TAP-like protein DN409_RS24990 PF00561 alpha/beta hydrolase fold DN409_RS25000 PF00155 Aminotransferase class I and II DN409_RS25010 PF08810 Kinase associated protein B DN409_RS25015 PF00929 Exonuclease DN409_RS25020 PF03600 Citrate transporter DN409_RS25035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_RS25035 PF03129 Anticodon binding domain DN409_RS25040 PF03061 Thioesterase superfamily DN409_RS25050 PF02632 BioY family DN409_RS25055 PF00483 Nucleotidyl transferase DN409_RS25060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN409_RS25060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN409_RS25060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN409_RS25060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN409_RS25065 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN409_RS25065 PF10372 Bacterial membrane-spanning protein N-terminus DN409_RS25070 PF00883 Cytosol aminopeptidase family, catalytic domain DN409_RS25070 PF02789 Cytosol aminopeptidase family, N-terminal domain DN409_RS25075 PF06725 3D domain DN409_RS25085 PF13344 Haloacid dehalogenase-like hydrolase DN409_RS25085 PF00293 NUDIX domain DN409_RS25090 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS25095 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS25100 PF06445 GyrI-like small molecule binding domain DN409_RS25115 PF04463 Protein of unknown function (DUF523) DN409_RS25140 PF01521 Iron-sulphur cluster biosynthesis DN409_RS25145 PF01678 Diaminopimelate epimerase DN409_RS25150 PF07293 Protein of unknown function (DUF1450) DN409_RS25155 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS25160 PF00005 ABC transporter DN409_RS25160 PF00664 ABC transporter transmembrane region DN409_RS25160 PF03412 Peptidase C39 family DN409_RS25165 PF03649 Uncharacterised protein family (UPF0014) DN409_RS25170 PF03831 PhnA domain DN409_RS25170 PF08274 PhnA Zinc-Ribbon DN409_RS25190 PF01909 Nucleotidyltransferase domain DN409_RS25190 PF13427 Domain of unknown function (DUF4111) DN409_RS25195 PF07315 Protein of unknown function (DUF1462) DN409_RS25200 PF01106 NifU-like domain DN409_RS25215 PF04608 Phosphatidylglycerophosphatase A DN409_RS25235 PF02687 FtsX-like permease family DN409_RS25235 PF12704 MacB-like periplasmic core domain DN409_RS25235 PF00005 ABC transporter DN409_RS25240 PF02525 Flavodoxin-like fold DN409_RS25250 PF13344 Haloacid dehalogenase-like hydrolase DN409_RS25260 PF01934 Protein of unknown function DUF86 DN409_RS25265 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN409_RS25285 PF06265 Protein of unknown function (DUF1027) DN409_RS25290 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DN409_RS25295 PF13411 MerR HTH family regulatory protein DN409_RS25295 PF07739 TipAS antibiotic-recognition domain DN409_RS25300 PF10086 YhfC intramembrane metalloprotease DN409_RS25320 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DN409_RS25320 PF04055 Radical SAM superfamily DN409_RS25325 PF01551 Peptidase family M23 DN409_RS25330 PF09560 Sporulation protein YunB (Spo_YunB) DN409_RS25335 PF08827 Domain of unknown function (DUF1805) DN409_RS25340 PF02872 5'-nucleotidase, C-terminal domain DN409_RS25345 PF01458 Uncharacterized protein family (UPF0051) DN409_RS25350 PF01592 NifU-like N terminal domain DN409_RS25355 PF00266 Aminotransferase class-V DN409_RS25360 PF01458 Uncharacterized protein family (UPF0051) DN409_RS25365 PF00005 ABC transporter DN409_RS25370 PF03180 NLPA lipoprotein DN409_RS25375 PF03180 NLPA lipoprotein DN409_RS25380 PF00528 Binding-protein-dependent transport system inner membrane component DN409_RS25385 PF00005 ABC transporter DN409_RS25385 PF09383 NIL domain DN409_RS25395 PF00085 Thioredoxin DN409_RS25400 PF01751 Toprim domain DN409_RS25405 PF01597 Glycine cleavage H-protein DN409_RS25410 PF03960 ArsC family DN409_RS25445 PF00440 Bacterial regulatory proteins, tetR family DN409_RS25445 PF13305 Tetracyclin repressor-like, C-terminal domain DN409_RS25450 PF00753 Metallo-beta-lactamase superfamily DN409_RS25455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_RS25455 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_RS25455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_RS25460 PF00108 Thiolase, N-terminal domain DN409_RS25460 PF02803 Thiolase, C-terminal domain DN409_RS25465 PF00378 Enoyl-CoA hydratase/isomerase DN409_RS25465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN409_RS25465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN409_RS25470 PF14115 YuzL-like protein DN409_RS25475 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_RS25475 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_RS25480 PF01619 Proline dehydrogenase DN409_RS25485 PF10835 Protein of unknown function (DUF2573) DN409_RS25490 PF01910 Thiamine-binding protein DN409_RS25495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS25495 PF00672 HAMP domain DN409_RS25495 PF02743 Cache domain DN409_RS25510 PF07690 Major Facilitator Superfamily DN409_RS25515 PF13520 Amino acid permease DN409_RS25530 PF02096 60Kd inner membrane protein DN409_RS25540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_RS25540 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_RS25570 PF09335 SNARE associated Golgi protein DN409_RS25580 PF03734 L,D-transpeptidase catalytic domain DN409_RS25580 PF17969 L,D-transpeptidase C-terminal domain DN409_RS25585 PF00072 Response regulator receiver domain DN409_RS25585 PF00486 Transcriptional regulatory protein, C terminal DN409_RS25590 PF16736 Single Cache-like DN409_RS25590 PF00989 PAS fold DN409_RS25590 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS25590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS25600 PF08264 Anticodon-binding domain of tRNA DN409_RS25600 PF09334 tRNA synthetases class I (M) DN409_RS25610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS25610 PF00672 HAMP domain DN409_RS25610 PF02743 Cache domain DN409_RS25615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS25615 PF02743 Cache domain DN409_RS25615 PF00672 HAMP domain DN409_RS25620 PF01883 Iron-sulfur cluster assembly protein DN409_RS25625 PF03413 Peptidase propeptide and YPEB domain DN409_RS25625 PF01447 Thermolysin metallopeptidase, catalytic domain DN409_RS25625 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN409_RS25625 PF07504 Fungalysin/Thermolysin Propeptide Motif DN409_RS25630 PF17954 Quercetinase C-terminal cupin domain DN409_RS25630 PF02678 Pirin DN409_RS25635 PF01047 MarR family DN409_RS25645 PF09335 SNARE associated Golgi protein DN409_RS25650 PF00999 Sodium/hydrogen exchanger family DN409_RS25655 PF02080 TrkA-C domain DN409_RS25660 PF01235 Sodium:alanine symporter family DN409_RS25665 PF00210 Ferritin-like domain DN409_RS25675 PF05163 DinB family DN409_RS25680 PF03641 Possible lysine decarboxylase DN409_RS25690 PF00210 Ferritin-like domain DN409_RS25695 PF04235 Protein of unknown function (DUF418) DN409_RS25700 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_RS25700 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_RS25705 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_RS25705 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_RS25710 PF01235 Sodium:alanine symporter family DN409_RS25715 PF13460 NAD(P)H-binding DN409_RS25745 PF00248 Aldo/keto reductase family DN409_RS25750 PF07690 Major Facilitator Superfamily DN409_RS25755 PF01638 HxlR-like helix-turn-helix DN409_RS25760 PF07849 Protein of unknown function (DUF1641) DN409_RS25765 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS25770 PF00579 tRNA synthetases class I (W and Y) DN409_RS25770 PF01479 S4 domain DN409_RS25775 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN409_RS25775 PF01565 FAD binding domain DN409_RS25785 PF17202 Single cache domain 3 DN409_RS25785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS25785 PF00672 HAMP domain DN409_RS25795 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN409_RS25800 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN409_RS25810 PF13443 Cro/C1-type HTH DNA-binding domain DN409_RS25815 PF11188 Protein of unknown function (DUF2975) DN409_RS25825 PF13302 Acetyltransferase (GNAT) domain DN409_RS25830 PF06146 Phosphate-starvation-inducible E DN409_RS25835 PF01638 HxlR-like helix-turn-helix DN409_RS25840 PF00881 Nitroreductase family DN409_RS25845 PF00296 Luciferase-like monooxygenase DN409_RS25850 PF05979 Bacterial protein of unknown function (DUF896) DN409_RS25855 PF01037 Lrp/AsnC ligand binding domain DN409_RS25860 PF00484 Carbonic anhydrase DN409_RS25865 PF02560 Cyanate lyase C-terminal domain DN409_RS25870 PF00860 Permease family DN409_RS25875 PF17440 Thiol-activated cytolysin beta sandwich domain DN409_RS25875 PF01289 Thiol-activated cytolysin DN409_RS25880 PF00005 ABC transporter DN409_RS25885 PF01032 FecCD transport family DN409_RS25890 PF01032 FecCD transport family DN409_RS25900 PF00072 Response regulator receiver domain DN409_RS25900 PF00486 Transcriptional regulatory protein, C terminal DN409_RS25915 PF01668 SmpB protein DN409_RS25925 PF17876 Cold shock domain DN409_RS25925 PF08206 Ribonuclease B OB domain DN409_RS25925 PF00575 S1 RNA binding domain DN409_RS25925 PF00773 RNB domain DN409_RS25930 PF12146 Serine aminopeptidase, S33 DN409_RS25935 PF03840 Preprotein translocase SecG subunit DN409_RS25940 PF04172 LrgB-like family DN409_RS25945 PF03788 LrgA family DN409_RS25950 PF01156 Inosine-uridine preferring nucleoside hydrolase DN409_RS25955 PF03952 Enolase, N-terminal domain DN409_RS25955 PF00113 Enolase, C-terminal TIM barrel domain DN409_RS25960 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DN409_RS25960 PF01676 Metalloenzyme superfamily DN409_RS25965 PF00121 Triosephosphate isomerase DN409_RS25970 PF00162 Phosphoglycerate kinase DN409_RS25975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN409_RS25975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN409_RS25980 PF04198 Putative sugar-binding domain DN409_RS25990 PF04963 Sigma-54 factor, core binding domain DN409_RS25990 PF00309 Sigma-54 factor, Activator interacting domain (AID) DN409_RS25990 PF04552 Sigma-54, DNA binding domain DN409_RS26010 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN409_RS26015 PF07451 Stage V sporulation protein AD (SpoVAD) DN409_RS26020 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN409_RS26030 PF04239 Protein of unknown function (DUF421) DN409_RS26035 PF00574 Clp protease DN409_RS26045 PF00381 PTS HPr component phosphorylation site DN409_RS26050 PF14527 WhiA LAGLIDADG-like domain DN409_RS26050 PF10298 WhiA N-terminal LAGLIDADG-like domain DN409_RS26050 PF02650 WhiA C-terminal HTH domain DN409_RS26055 PF01933 Uncharacterised protein family UPF0052 DN409_RS26060 PF03668 P-loop ATPase protein family DN409_RS26065 PF00293 NUDIX domain DN409_RS26075 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_RS26085 PF14602 Hexapeptide repeat of succinyl-transferase DN409_RS26090 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS26095 PF01790 Prolipoprotein diacylglyceryl transferase DN409_RS26100 PF07475 HPr Serine kinase C-terminal domain DN409_RS26100 PF02603 HPr Serine kinase N terminus DN409_RS26105 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DN409_RS26115 PF17760 UvrA interaction domain DN409_RS26115 PF17755 UvrA DNA-binding domain DN409_RS26115 PF00005 ABC transporter DN409_RS26120 PF17757 UvrB interaction domain DN409_RS26120 PF12344 Ultra-violet resistance protein B DN409_RS26120 PF02151 UvrB/uvrC motif DN409_RS26120 PF04851 Type III restriction enzyme, res subunit DN409_RS26120 PF00271 Helicase conserved C-terminal domain DN409_RS26135 PF13411 MerR HTH family regulatory protein DN409_RS26135 PF07739 TipAS antibiotic-recognition domain DN409_RS26165 PF03601 Conserved hypothetical protein 698 DN409_RS26170 PF03466 LysR substrate binding domain DN409_RS26170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS26180 PF03358 NADPH-dependent FMN reductase DN409_RS26185 PF00005 ABC transporter DN409_RS26185 PF12848 ABC transporter DN409_RS26190 PF01906 Putative heavy-metal-binding DN409_RS26195 PF00664 ABC transporter transmembrane region DN409_RS26195 PF00005 ABC transporter DN409_RS26200 PF17820 PDZ domain DN409_RS26205 PF01471 Putative peptidoglycan binding domain DN409_RS26205 PF03572 Peptidase family S41 DN409_RS26205 PF17820 PDZ domain DN409_RS26210 PF18075 FtsX extracellular domain DN409_RS26210 PF02687 FtsX-like permease family DN409_RS26215 PF00005 ABC transporter DN409_RS26220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN409_RS26235 PF02810 SEC-C motif DN409_RS26235 PF07517 SecA DEAD-like domain DN409_RS26235 PF01043 SecA preprotein cross-linking domain DN409_RS26235 PF07516 SecA Wing and Scaffold domain DN409_RS26250 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DN409_RS26250 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DN409_RS26255 PF00313 'Cold-shock' DNA-binding domain DN409_RS26265 PF04851 Type III restriction enzyme, res subunit DN409_RS26265 PF00271 Helicase conserved C-terminal domain DN409_RS26270 PF00877 NlpC/P60 family DN409_RS26270 PF01476 LysM domain DN409_RS26275 PF01638 HxlR-like helix-turn-helix DN409_RS26280 PF02645 Uncharacterised protein, DegV family COG1307 DN409_RS26285 PF09186 Domain of unknown function (DUF1949) DN409_RS26285 PF01205 Uncharacterized protein family UPF0029 DN409_RS26290 PF03816 Cell envelope-related transcriptional attenuator domain DN409_RS26295 PF02350 UDP-N-acetylglucosamine 2-epimerase DN409_RS26300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN409_RS26300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN409_RS26300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN409_RS26305 PF00953 Glycosyl transferase family 4 DN409_RS26310 PF01522 Polysaccharide deacetylase DN409_RS26315 PF03610 PTS system fructose IIA component DN409_RS26315 PF00158 Sigma-54 interaction domain DN409_RS26315 PF00874 PRD domain DN409_RS26330 PF04794 YdjC-like protein DN409_RS26335 PF11975 Family 4 glycosyl hydrolase C-terminal domain DN409_RS26335 PF02056 Family 4 glycosyl hydrolase DN409_RS26340 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN409_RS26345 PF02378 Phosphotransferase system, EIIC DN409_RS26350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN409_RS26360 PF02675 S-adenosylmethionine decarboxylase DN409_RS26365 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN409_RS26370 PF02378 Phosphotransferase system, EIIC DN409_RS26375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN409_RS26380 PF00375 Sodium:dicarboxylate symporter family DN409_RS26400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS26400 PF03466 LysR substrate binding domain DN409_RS26410 PF01654 Cytochrome bd terminal oxidase subunit I DN409_RS26415 PF02322 Cytochrome bd terminal oxidase subunit II DN409_RS26420 PF02040 Arsenical pump membrane protein DN409_RS26425 PF01964 Radical SAM ThiC family DN409_RS26425 PF13667 ThiC-associated domain DN409_RS26430 PF02652 L-lactate permease DN409_RS26440 PF09988 Uncharacterized metal-binding protein (DUF2227) DN409_RS26455 PF00884 Sulfatase DN409_RS26460 PF01063 Amino-transferase class IV DN409_RS26465 PF01476 LysM domain DN409_RS26465 PF00877 NlpC/P60 family DN409_RS26470 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_RS26470 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_RS26485 PF02028 BCCT, betaine/carnitine/choline family transporter DN409_RS26495 PF01476 LysM domain DN409_RS26495 PF06725 3D domain DN409_RS26520 PF04434 SWIM zinc finger DN409_RS26525 PF00271 Helicase conserved C-terminal domain DN409_RS26525 PF00176 SNF2 family N-terminal domain DN409_RS26525 PF12419 SNF2 Helicase protein DN409_RS26560 PF04893 Yip1 domain DN409_RS26565 PF02687 FtsX-like permease family DN409_RS26565 PF12704 MacB-like periplasmic core domain DN409_RS26570 PF00005 ABC transporter DN409_RS26590 PF07690 Major Facilitator Superfamily DN409_RS26605 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS26605 PF00672 HAMP domain DN409_RS26605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS26610 PF00486 Transcriptional regulatory protein, C terminal DN409_RS26610 PF00072 Response regulator receiver domain DN409_RS26620 PF03816 Cell envelope-related transcriptional attenuator domain DN409_RS26625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN409_RS26625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN409_RS26625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN409_RS26640 PF13439 Glycosyltransferase Family 4 DN409_RS26640 PF00534 Glycosyl transferases group 1 DN409_RS26655 PF00534 Glycosyl transferases group 1 DN409_RS26660 PF02350 UDP-N-acetylglucosamine 2-epimerase DN409_RS26665 PF01370 NAD dependent epimerase/dehydratase family DN409_RS26670 PF02719 Polysaccharide biosynthesis protein DN409_RS26670 PF08485 Polysaccharide biosynthesis protein C-terminal DN409_RS26675 PF13579 Glycosyl transferase 4-like domain DN409_RS26680 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_RS26685 PF02397 Bacterial sugar transferase DN409_RS26690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN409_RS26695 PF02719 Polysaccharide biosynthesis protein DN409_RS26700 PF00483 Nucleotidyl transferase DN409_RS26710 PF13614 AAA domain DN409_RS26715 PF13807 G-rich domain on putative tyrosine kinase DN409_RS26715 PF02706 Chain length determinant protein DN409_RS26720 PF13614 AAA domain DN409_RS26730 PF07977 FabA-like domain DN409_RS26740 PF12116 Stage III sporulation protein D DN409_RS26750 PF01551 Peptidase family M23 DN409_RS26760 PF00005 ABC transporter DN409_RS26765 PF00072 Response regulator receiver domain DN409_RS26765 PF04397 LytTr DNA-binding domain DN409_RS26770 PF08486 Stage II sporulation protein DN409_RS26775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN409_RS26785 PF06612 Protein of unknown function (DUF1146) DN409_RS26790 PF00361 Proton-conducting membrane transporter DN409_RS26795 PF00361 Proton-conducting membrane transporter DN409_RS26800 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DN409_RS26800 PF00361 Proton-conducting membrane transporter DN409_RS26800 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DN409_RS26805 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DN409_RS26810 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DN409_RS26820 PF00146 NADH dehydrogenase DN409_RS26825 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DN409_RS26830 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DN409_RS26835 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DN409_RS26840 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DN409_RS26845 PF03707 Bacterial signalling protein N terminal repeat DN409_RS26845 PF00563 EAL domain DN409_RS26845 PF00990 Diguanylate cyclase, GGDEF domain DN409_RS26860 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DN409_RS26860 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DN409_RS26865 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN409_RS26865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN409_RS26870 PF00231 ATP synthase DN409_RS26875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN409_RS26875 PF00306 ATP synthase alpha/beta chain, C terminal domain DN409_RS26875 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN409_RS26880 PF00213 ATP synthase delta (OSCP) subunit DN409_RS26885 PF00430 ATP synthase B/B' CF(0) DN409_RS26890 PF00137 ATP synthase subunit C DN409_RS26895 PF00119 ATP synthase A chain DN409_RS26900 PF03899 ATP synthase I chain DN409_RS26920 PF00464 Serine hydroxymethyltransferase DN409_RS26925 PF04260 Protein of unknown function (DUF436) DN409_RS26930 PF02502 Ribose/Galactose Isomerase DN409_RS26935 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN409_RS26940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN409_RS26945 PF07681 DoxX DN409_RS26950 PF01613 Flavin reductase like domain DN409_RS26960 PF02659 Putative manganese efflux pump DN409_RS26965 PF01300 Telomere recombination DN409_RS26965 PF03481 Putative GTP-binding controlling metal-binding DN409_RS26975 PF09551 Stage II sporulation protein R (spore_II_R) DN409_RS26980 PF13847 Methyltransferase domain DN409_RS26980 PF17827 PrmC N-terminal domain DN409_RS26985 PF03462 PCRF domain DN409_RS26985 PF00472 RF-1 domain DN409_RS26990 PF00265 Thymidine kinase DN409_RS26995 PF01197 Ribosomal protein L31 DN409_RS27005 PF07498 Rho termination factor, N-terminal domain DN409_RS27005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN409_RS27005 PF07497 Rho termination factor, RNA-binding domain DN409_RS27010 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN409_RS27015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN409_RS27020 PF01116 Fructose-bisphosphate aldolase class-II DN409_RS27025 PF00072 Response regulator receiver domain DN409_RS27030 PF10740 Domain of unknown function (DUF2529) DN409_RS27035 PF06418 CTP synthase N-terminus DN409_RS27035 PF00117 Glutamine amidotransferase class-I DN409_RS27040 PF05066 HB1, ASXL, restriction endonuclease HTH domain DN409_RS27050 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_RS27050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_RS27050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_RS27055 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_RS27055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_RS27055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_RS27060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN409_RS27060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN409_RS27065 PF02803 Thiolase, C-terminal domain DN409_RS27065 PF00108 Thiolase, N-terminal domain DN409_RS27070 PF02754 Cysteine-rich domain DN409_RS27070 PF13183 4Fe-4S dicluster domain DN409_RS27075 PF13091 PLD-like domain DN409_RS27080 PF03851 UV-endonuclease UvdE DN409_RS27085 PF00563 EAL domain DN409_RS27085 PF00990 Diguanylate cyclase, GGDEF domain DN409_RS27085 PF03707 Bacterial signalling protein N terminal repeat DN409_RS27100 PF01447 Thermolysin metallopeptidase, catalytic domain DN409_RS27100 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN409_RS27100 PF07504 Fungalysin/Thermolysin Propeptide Motif DN409_RS27100 PF03413 Peptidase propeptide and YPEB domain DN409_RS27105 PF00072 Response regulator receiver domain DN409_RS27105 PF00196 Bacterial regulatory proteins, luxR family DN409_RS27110 PF07730 Histidine kinase DN409_RS27110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS27120 PF00005 ABC transporter DN409_RS27125 PF00557 Metallopeptidase family M24 DN409_RS27135 PF04389 Peptidase family M28 DN409_RS27135 PF02225 PA domain DN409_RS27150 PF03485 Arginyl tRNA synthetase N terminal domain DN409_RS27150 PF00750 tRNA synthetases class I (R) DN409_RS27150 PF05746 DALR anticodon binding domain DN409_RS27155 PF09148 Domain of unknown function (DUF1934) DN409_RS27160 PF02016 LD-carboxypeptidase N-terminal domain DN409_RS27160 PF17676 LD-carboxypeptidase C-terminal domain DN409_RS27180 PF00491 Arginase family DN409_RS27185 PF17284 Spermidine synthase tetramerisation domain DN409_RS27190 PF07690 Major Facilitator Superfamily DN409_RS27195 PF13411 MerR HTH family regulatory protein DN409_RS27200 PF03009 Glycerophosphoryl diester phosphodiesterase family DN409_RS27205 PF00905 Penicillin binding protein transpeptidase domain DN409_RS27205 PF00912 Transglycosylase DN409_RS27210 PF08741 YwhD family DN409_RS27215 PF02163 Peptidase family M50 DN409_RS27220 PF01361 Tautomerase enzyme DN409_RS27225 PF01966 HD domain DN409_RS27230 PF01497 Periplasmic binding protein DN409_RS27235 PF00005 ABC transporter DN409_RS27240 PF01032 FecCD transport family DN409_RS27245 PF01032 FecCD transport family DN409_RS27250 PF07293 Protein of unknown function (DUF1450) DN409_RS27260 PF03099 Biotin/lipoate A/B protein ligase family DN409_RS27265 PF01515 Phosphate acetyl/butaryl transferase DN409_RS27270 PF06778 Chlorite dismutase DN409_RS27275 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_RS27275 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_RS27280 PF07486 Cell Wall Hydrolase DN409_RS27285 PF09671 Spore coat protein (Spore_GerQ) DN409_RS27290 PF04241 Protein of unknown function (DUF423) DN409_RS27305 PF00860 Permease family DN409_RS27315 PF12823 Domain of unknown function (DUF3817) DN409_RS27320 PF03167 Uracil DNA glycosylase superfamily DN409_RS27325 PF12679 ABC-2 family transporter protein DN409_RS27330 PF00005 ABC transporter DN409_RS27335 PF13472 GDSL-like Lipase/Acylhydrolase family DN409_RS27340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN409_RS27340 PF00356 Bacterial regulatory proteins, lacI family DN409_RS27350 PF01842 ACT domain DN409_RS27350 PF03447 Homoserine dehydrogenase, NAD binding domain DN409_RS27350 PF00742 Homoserine dehydrogenase DN409_RS27355 PF04204 Homoserine O-succinyltransferase DN409_RS27360 PF01053 Cys/Met metabolism PLP-dependent enzyme DN409_RS27370 PF13419 Haloacid dehalogenase-like hydrolase DN409_RS27375 PF00027 Cyclic nucleotide-binding domain DN409_RS27380 PF02525 Flavodoxin-like fold DN409_RS27385 PF00196 Bacterial regulatory proteins, luxR family DN409_RS27385 PF00072 Response regulator receiver domain DN409_RS27390 PF07730 Histidine kinase DN409_RS27390 PF13185 GAF domain DN409_RS27395 PF08543 Phosphomethylpyrimidine kinase DN409_RS27400 PF07694 5TMR of 5TMR-LYT DN409_RS27400 PF00990 Diguanylate cyclase, GGDEF domain DN409_RS27405 PF04328 Selenoprotein, putative DN409_RS27410 PF13722 5TM C-terminal transporter carbon starvation CstA DN409_RS27410 PF02554 Carbon starvation protein CstA DN409_RS27415 PF04397 LytTr DNA-binding domain DN409_RS27415 PF00072 Response regulator receiver domain DN409_RS27420 PF07690 Major Facilitator Superfamily DN409_RS27425 PF03808 Glycosyl transferase WecB/TagA/CpsF family DN409_RS27430 PF08323 Starch synthase catalytic domain DN409_RS27430 PF00534 Glycosyl transferases group 1 DN409_RS27440 PF03458 UPF0126 domain DN409_RS27445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS27455 PF03061 Thioesterase superfamily DN409_RS27460 PF00535 Glycosyl transferase family 2 DN409_RS27470 PF00535 Glycosyl transferase family 2 DN409_RS27480 PF00005 ABC transporter DN409_RS27480 PF12848 ABC transporter DN409_RS27485 PF00440 Bacterial regulatory proteins, tetR family DN409_RS27490 PF00873 AcrB/AcrD/AcrF family DN409_RS27495 PF01641 SelR domain DN409_RS27495 PF01625 Peptide methionine sulfoxide reductase DN409_RS27500 PF01594 AI-2E family transporter DN409_RS27505 PF04172 LrgB-like family DN409_RS27510 PF03788 LrgA family DN409_RS27515 PF00072 Response regulator receiver domain DN409_RS27515 PF04397 LytTr DNA-binding domain DN409_RS27520 PF06580 Histidine kinase DN409_RS27520 PF13492 GAF domain DN409_RS27520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS27520 PF07694 5TMR of 5TMR-LYT DN409_RS27525 PF07690 Major Facilitator Superfamily DN409_RS27530 PF02028 BCCT, betaine/carnitine/choline family transporter DN409_RS27535 PF02898 Nitric oxide synthase, oxygenase domain DN409_RS27545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN409_RS27545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN409_RS27555 PF02293 AmiS/UreI family transporter DN409_RS27595 PF16363 GDP-mannose 4,6 dehydratase DN409_RS27600 PF03006 Haemolysin-III related DN409_RS27610 PF00270 DEAD/DEAH box helicase DN409_RS27610 PF00271 Helicase conserved C-terminal domain DN409_RS27610 PF03880 DbpA RNA binding domain DN409_RS27620 PF00478 IMP dehydrogenase / GMP reductase domain DN409_RS27625 PF01432 Peptidase family M3 DN409_RS27625 PF08439 Oligopeptidase F DN409_RS27635 PF02590 Predicted SPOUT methyltransferase DN409_RS27645 PF13180 PDZ domain DN409_RS27650 PF00753 Metallo-beta-lactamase superfamily DN409_RS27655 PF09648 YycH protein DN409_RS27665 PF13426 PAS domain DN409_RS27665 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS27665 PF00672 HAMP domain DN409_RS27665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS27670 PF00072 Response regulator receiver domain DN409_RS27670 PF00486 Transcriptional regulatory protein, C terminal DN409_RS27695 PF00709 Adenylosuccinate synthetase DN409_RS27700 PF03796 DnaB-like helicase C terminal domain DN409_RS27700 PF00772 DnaB-like helicase N terminal domain DN409_RS27705 PF01281 Ribosomal protein L9, N-terminal domain DN409_RS27705 PF03948 Ribosomal protein L9, C-terminal domain DN409_RS27710 PF02272 DHHA1 domain DN409_RS27710 PF01368 DHH family DN409_RS27715 PF09991 Predicted membrane protein (DUF2232) DN409_RS27720 PF01084 Ribosomal protein S18 DN409_RS27725 PF00436 Single-strand binding protein family DN409_RS27730 PF01250 Ribosomal protein S6 DN409_RS27735 PF01926 50S ribosome-binding GTPase DN409_RS27735 PF06071 Protein of unknown function (DUF933) DN409_RS27740 PF06107 Bacterial protein of unknown function (DUF951) DN409_RS27745 PF00924 Mechanosensitive ion channel DN409_RS27750 PF06866 Protein of unknown function (DUF1256) DN409_RS27755 PF17762 HTH domain found in ParB protein DN409_RS27755 PF02195 ParB-like nuclease domain DN409_RS27760 PF13614 AAA domain DN409_RS27765 PF02195 ParB-like nuclease domain DN409_RS27765 PF17762 HTH domain found in ParB protein DN409_RS27770 PF02527 rRNA small subunit methyltransferase G DN409_RS27775 PF13932 GidA associated domain DN409_RS27775 PF01134 Glucose inhibited division protein A DN409_RS27780 PF01926 50S ribosome-binding GTPase DN409_RS27780 PF12631 MnmE helical domain DN409_RS27780 PF10396 GTP-binding protein TrmE N-terminus DN409_RS27785 PF01424 R3H domain DN409_RS27785 PF14804 Jag N-terminus DN409_RS27790 PF02096 60Kd inner membrane protein DN409_RS27795 PF00825 Ribonuclease P DN409_RS27800 PF00468 Ribosomal protein L34 DN409_RS27805 PF00091 Tubulin/FtsZ family, GTPase domain DN409_RS27820 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS27820 PF00989 PAS fold DN409_RS27820 PF13188 PAS domain DN409_RS27820 PF13426 PAS domain DN409_RS27820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS27840 PF01385 Probable transposase DN409_RS27840 PF07282 Putative transposase DNA-binding domain DN409_RS27840 PF12323 Helix-turn-helix domain DN409_RS27900 PF00881 Nitroreductase family DN409_RS27920 PF00005 ABC transporter DN409_RS27930 PF01609 Transposase DDE domain DN409_RS27940 PF00817 impB/mucB/samB family DN409_RS27940 PF11799 impB/mucB/samB family C-terminal domain DN409_RS27940 PF11798 IMS family HHH motif DN409_RS27955 PF09397 Ftsk gamma domain DN409_RS27955 PF01580 FtsK/SpoIIIE family DN409_RS27955 PF17854 FtsK alpha domain DN409_RS28040 PF00144 Beta-lactamase DN409_RS28045 PF00144 Beta-lactamase DN409_RS28060 PF01022 Bacterial regulatory protein, arsR family DN409_RS28070 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN409_RS28070 PF00753 Metallo-beta-lactamase superfamily DN409_RS28090 PF00440 Bacterial regulatory proteins, tetR family DN409_RS28095 PF13537 Glutamine amidotransferase domain DN409_RS28095 PF00733 Asparagine synthase DN409_RS28105 PF01385 Probable transposase DN409_RS28105 PF07282 Putative transposase DNA-binding domain DN409_RS28105 PF12323 Helix-turn-helix domain DN409_RS28145 PF04225 Opacity-associated protein A LysM-like domain DN409_RS28145 PF01551 Peptidase family M23 DN409_RS28175 PF13457 GW (Gly-Tryp) dipeptide domain DN409_RS28175 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DN409_RS28200 PF02463 RecF/RecN/SMC N terminal domain DN409_RS28205 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DN409_RS28220 PF01757 Acyltransferase family DN409_RS28240 PF00692 dUTPase DN409_RS28255 PF10676 Spore germination protein gerPA/gerPF DN409_RS28290 PF00535 Glycosyl transferase family 2 DN409_RS28295 PF00535 Glycosyl transferase family 2 DN409_RS28300 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DN409_RS28305 PF02719 Polysaccharide biosynthesis protein DN409_RS28310 PF16363 GDP-mannose 4,6 dehydratase DN409_RS28315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN409_RS28320 PF02348 Cytidylyltransferase DN409_RS28335 PF08666 SAF domain DN409_RS28335 PF03102 NeuB family DN409_RS28340 PF12996 DUF based on E. rectale Gene description (DUF3880) DN409_RS28360 PF00555 delta endotoxin DN409_RS28360 PF03945 delta endotoxin, N-terminal domain DN409_RS28360 PF03944 delta endotoxin DN409_RS28390 PF04397 LytTr DNA-binding domain DN409_RS28410 PF00486 Transcriptional regulatory protein, C terminal DN409_RS28410 PF00072 Response regulator receiver domain DN409_RS28415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS28420 PF07786 Protein of unknown function (DUF1624) DN409_RS28420 PF04235 Protein of unknown function (DUF418) DN409_RS28430 PF00005 ABC transporter DN409_RS28435 PF02687 FtsX-like permease family DN409_RS28445 PF18277 AbrB C-terminal domain DN409_RS28445 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_RS28455 PF17209 Hfq protein DN409_RS28460 PF00553 Cellulose binding domain DN409_RS28460 PF00041 Fibronectin type III domain DN409_RS28460 PF00704 Glycosyl hydrolases family 18 DN409_RS28465 PF00553 Cellulose binding domain DN409_RS28465 PF00041 Fibronectin type III domain DN409_RS28465 PF00704 Glycosyl hydrolases family 18 DN409_RS28475 PF00144 Beta-lactamase DN409_RS28485 PF07690 Major Facilitator Superfamily DN409_RS28490 PF00501 AMP-binding enzyme DN409_RS28490 PF13193 AMP-binding enzyme C-terminal domain DN409_RS28490 PF00668 Condensation domain DN409_RS28490 PF00550 Phosphopantetheine attachment site DN409_RS28495 PF00501 AMP-binding enzyme DN409_RS28495 PF00668 Condensation domain DN409_RS28495 PF00550 Phosphopantetheine attachment site DN409_RS28495 PF07993 Male sterility protein DN409_RS28495 PF13193 AMP-binding enzyme C-terminal domain DN409_RS28500 PF00550 Phosphopantetheine attachment site DN409_RS28500 PF00668 Condensation domain DN409_RS28500 PF13193 AMP-binding enzyme C-terminal domain DN409_RS28500 PF00501 AMP-binding enzyme DN409_RS28505 PF01648 4'-phosphopantetheinyl transferase superfamily DN409_RS28510 PF00975 Thioesterase domain DN409_RS28525 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_RS28525 PF18277 AbrB C-terminal domain DN409_RS28530 PF10676 Spore germination protein gerPA/gerPF DN409_RS28540 PF10676 Spore germination protein gerPA/gerPF DN409_RS28560 PF00589 Phage integrase family DN409_RS28595 PF03062 MBOAT, membrane-bound O-acyltransferase family DN409_RS28605 PF07690 Major Facilitator Superfamily DN409_RS28610 PF00857 Isochorismatase family DN409_RS28615 PF00440 Bacterial regulatory proteins, tetR family DN409_RS28625 PF13610 DDE domain DN409_RS28640 PF13610 DDE domain DN409_RS28650 PF02899 Phage integrase, N-terminal SAM-like domain DN409_RS28650 PF00589 Phage integrase family DN409_RS28670 PF01022 Bacterial regulatory protein, arsR family DN409_RS28675 PF01476 LysM domain DN409_RS28675 PF08239 Bacterial SH3 domain DN409_RS28675 PF00877 NlpC/P60 family DN409_RS28685 PF07859 alpha/beta hydrolase fold DN409_RS28690 PF00797 N-acetyltransferase DN409_RS28695 PF13610 DDE domain DN409_RS28705 PF03466 LysR substrate binding domain DN409_RS28705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS28710 PF03717 Penicillin-binding Protein dimerisation domain DN409_RS28710 PF00905 Penicillin binding protein transpeptidase domain DN409_RS28720 PF13529 Peptidase_C39 like family DN409_RS28725 PF00072 Response regulator receiver domain DN409_RS28725 PF00486 Transcriptional regulatory protein, C terminal DN409_RS28730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS28730 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS28730 PF00989 PAS fold DN409_RS28730 PF16736 Single Cache-like DN409_RS28735 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DN409_RS28745 PF00486 Transcriptional regulatory protein, C terminal DN409_RS28745 PF00072 Response regulator receiver domain DN409_RS28750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_RS28750 PF00512 His Kinase A (phospho-acceptor) domain DN409_RS28770 PF12323 Helix-turn-helix domain DN409_RS28770 PF01385 Probable transposase DN409_RS28770 PF07282 Putative transposase DNA-binding domain DN409_RS28775 PF00324 Amino acid permease DN409_RS28780 PF02308 MgtC family DN409_RS28790 PF00561 alpha/beta hydrolase fold DN409_RS28790 PF08386 TAP-like protein DN409_RS28800 PF00216 Bacterial DNA-binding protein DN409_RS28805 PF00672 HAMP domain DN409_RS28805 PF02743 Cache domain DN409_RS28805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_RS28830 PF12833 Helix-turn-helix domain DN409_RS28875 PF13495 Phage integrase, N-terminal SAM-like domain DN409_RS28875 PF00589 Phage integrase family DN409_RS28885 PF13610 DDE domain DN409_RS28890 PF17209 Hfq protein DN409_RS28905 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_RS28905 PF18277 AbrB C-terminal domain DN409_RS28910 PF00753 Metallo-beta-lactamase superfamily DN409_RS28910 PF13567 Domain of unknown function (DUF4131) DN409_RS28910 PF03772 Competence protein DN409_RS28940 PF10779 Haemolysin XhlA DN409_RS28965 PF02423 Ornithine cyclodeaminase/mu-crystallin family DN409_RS28975 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DN409_RS28980 PF00764 Arginosuccinate synthase DN409_RS28995 PF00501 AMP-binding enzyme DN409_RS28995 PF13193 AMP-binding enzyme C-terminal domain DN409_RS29000 PF01042 Endoribonuclease L-PSP DN409_RS29010 PF01648 4'-phosphopantetheinyl transferase superfamily DN409_RS29015 PF00550 Phosphopantetheine attachment site DN409_RS29020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_RS29020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_RS29020 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_RS29030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN409_RS29030 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DN409_RS29040 PF17760 UvrA interaction domain DN409_RS29040 PF00005 ABC transporter DN409_RS29040 PF17755 UvrA DNA-binding domain DN409_RS29045 PF00271 Helicase conserved C-terminal domain DN409_RS29045 PF02151 UvrB/uvrC motif DN409_RS29045 PF12344 Ultra-violet resistance protein B DN409_RS29045 PF17757 UvrB interaction domain DN409_RS29045 PF04851 Type III restriction enzyme, res subunit DN409_RS29050 PF00056 lactate/malate dehydrogenase, NAD binding domain DN409_RS29050 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN409_RS29055 PF13193 AMP-binding enzyme C-terminal domain DN409_RS29055 PF00501 AMP-binding enzyme DN409_RS29070 PF00155 Aminotransferase class I and II DN409_RS29125 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN409_RS29125 PF12002 MgsA AAA+ ATPase C terminal DN409_RS29125 PF01661 Macro domain DN409_RS29125 PF16193 AAA C-terminal domain DN409_RS29135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN409_RS29135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN409_RS29140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_RS29140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_RS29140 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_RS29150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DN409_RS29150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DN409_RS29155 PF00578 AhpC/TSA family DN409_RS29165 PF13478 XdhC Rossmann domain DN409_RS29165 PF02625 XdhC and CoxI family DN409_RS29170 PF01799 [2Fe-2S] binding domain DN409_RS29170 PF00111 2Fe-2S iron-sulfur cluster binding domain DN409_RS29185 PF08240 Alcohol dehydrogenase GroES-like domain DN409_RS29185 PF00107 Zinc-binding dehydrogenase DN409_RS29185 PF13823 Alcohol dehydrogenase GroES-associated DN409_RS29195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN409_RS29200 PF00483 Nucleotidyl transferase DN409_RS29205 PF00534 Glycosyl transferases group 1 DN409_RS29205 PF13439 Glycosyltransferase Family 4 DN409_RS29210 PF16363 GDP-mannose 4,6 dehydratase DN409_RS29215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN409_RS29215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN409_RS29215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN409_RS29230 PF00291 Pyridoxal-phosphate dependent enzyme DN409_RS29235 PF00291 Pyridoxal-phosphate dependent enzyme DN409_RS29240 PF00005 ABC transporter DN409_RS29255 PF13280 WYL domain DN409_RS29255 PF08279 HTH domain DN409_RS29280 PF13610 DDE domain DN409_RS29290 PF00216 Bacterial DNA-binding protein DN409_RS29295 PF18277 AbrB C-terminal domain DN409_RS29295 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_RS29345 PF00196 Bacterial regulatory proteins, luxR family DN409_RS29345 PF00072 Response regulator receiver domain DN409_RS29355 PF00144 Beta-lactamase DN409_RS29360 PF07282 Putative transposase DNA-binding domain DN409_RS29360 PF12323 Helix-turn-helix domain DN409_RS29360 PF01385 Probable transposase DN409_RS29365 PF07690 Major Facilitator Superfamily DN409_RS29370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_RS29370 PF03466 LysR substrate binding domain DN409_RS29380 PF13610 DDE domain DN409_RS29425 PF01569 PAP2 superfamily DN409_RS29445 PF00041 Fibronectin type III domain DN409_RS29445 PF00553 Cellulose binding domain DN409_RS29445 PF00704 Glycosyl hydrolases family 18 DN409_RS29455 PF04607 Region found in RelA / SpoT proteins DN409_RS29460 PF07690 Major Facilitator Superfamily DN409_RS29465 PF00440 Bacterial regulatory proteins, tetR family DN409_RS29465 PF08360 QacR-like protein, C-terminal region DN409_RS29470 PF11954 Domain of unknown function (DUF3471) DN409_RS29470 PF00144 Beta-lactamase DN409_RS29480 PF02667 Short chain fatty acid transporter DN409_RS29530 PF00144 Beta-lactamase DN409_RS29535 PF00072 Response regulator receiver domain DN409_RS29535 PF00196 Bacterial regulatory proteins, luxR family DN409_RS29540 PF13610 DDE domain DN409_RS29550 PF18840 Large polyvalent protein associated domain 25 DN409_RS29585 PF00877 NlpC/P60 family DN409_RS29670 PF01381 Helix-turn-helix DN409_RS29700 PF00557 Metallopeptidase family M24 DN409_RS29770 PF13392 HNH endonuclease DN409_RS29790 PF00145 C-5 cytosine-specific DNA methylase DN409_RS29790 PF01381 Helix-turn-helix DN409_RS29835 PF10668 Phage terminase small subunit DN409_RS29995 PF14470 Bacterial PH domain DN409_RS30030 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system DN409_RS30090 PF02511 Thymidylate synthase complementing protein DN409_RS30235 PF09397 Ftsk gamma domain DN409_RS30235 PF17854 FtsK alpha domain DN409_RS30235 PF01580 FtsK/SpoIIIE family DN409_RS30270 PF01381 Helix-turn-helix DN409_RS30320 PF08708 Primase C terminal 1 (PriCT-1) DN409_RS30330 PF13610 DDE domain DN409_RS30365 PF04134 Protein of unknown function, DUF393 DN409_RS30375 PF10502 Signal peptidase, peptidase S26 DN409_RS30380 PF05547 Immune inhibitor A peptidase M6 DN409_RS30405 PF00589 Phage integrase family DN409_RS30405 PF02899 Phage integrase, N-terminal SAM-like domain DN409_RS30410 PF02796 Helix-turn-helix domain of resolvase DN409_RS30410 PF00239 Resolvase, N terminal domain DN409_RS30450 PF13610 DDE domain DN409_RS30465 PF13411 MerR HTH family regulatory protein DN409_RS30465 PF13152 Protein of unknown function (DUF3967) DN409_RS30475 PF13610 DDE domain DN409_RS30480 PF13152 Protein of unknown function (DUF3967) DN409_RS30480 PF13411 MerR HTH family regulatory protein DN409_RS30495 PF13614 AAA domain DN409_RS30515 PF00684 DnaJ central domain DN409_RS30515 PF00226 DnaJ domain DN409_RS30515 PF01556 DnaJ C terminal domain DN409_RS30535 PF00877 NlpC/P60 family DN409_RS30605 PF01580 FtsK/SpoIIIE family DN409_RS30625 PF07972 NrdI Flavodoxin like DN409_RS30660 PF14040 Deoxyribonuclease NucA/NucB DN409_RS30685 PF00589 Phage integrase family DN409_RS30710 PF12802 MarR family DN409_RS30735 PF00664 ABC transporter transmembrane region DN409_RS30735 PF00005 ABC transporter DN409_RS30735 PF03412 Peptidase C39 family DN409_RS30745 PF00589 Phage integrase family