locus-tag	class	description
J5V93_RS00025	COG2205	protein histidine kinase activity
J5V93_RS00030	COG0745	RESPONSE REGULATOR receiver
J5V93_RS00050	COG0697	spore germination
J5V93_RS00075	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
J5V93_RS00080	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
J5V93_RS00085	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
J5V93_RS00090	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
J5V93_RS00095	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J5V93_RS00100	COG0047	phosphoribosylformylglycinamidine synthase activity
J5V93_RS00105	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J5V93_RS00110	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
J5V93_RS00115	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
J5V93_RS00120	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
J5V93_RS00125	COG0138	bifunctional purine biosynthesis protein purh
J5V93_RS00130	COG0151	Belongs to the GarS family
J5V93_RS00150	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
J5V93_RS00155	COG0210	DNA helicase
J5V93_RS00160	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
J5V93_RS00165	COG4851	CamS sex pheromone cAM373 precursor
J5V93_RS00175	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS00180	COG1335	isochorismatase
J5V93_RS00190	COG2011	ABC-type metal ion transport system permease component
J5V93_RS00195	COG1464	Belongs to the NlpA lipoprotein family
J5V93_RS00210	COG0003	Pfam Anion-transporting ATPase
J5V93_RS00215	COG1846	Transcriptional regulator
J5V93_RS00220	COG4682	membrane
J5V93_RS00230	COG0154	amidase activity
J5V93_RS00235	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
J5V93_RS00240	COG1597	lipid kinase activity
J5V93_RS00245	COG0546	phosphoglycolate phosphatase activity
J5V93_RS00250	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
J5V93_RS00260	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS00265	COG2076	Multidrug Resistance protein
J5V93_RS00270	COG2309	aminopeptidase activity
J5V93_RS00285	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V93_RS00295	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J5V93_RS00300	COG5002	protein histidine kinase activity
J5V93_RS00305	COG4807	Protein conserved in bacteria
J5V93_RS00330	COG1757	Na H antiporter
J5V93_RS00335	COG1473	amidohydrolase
J5V93_RS00350	COG0450	alkyl hydroperoxide reductase
J5V93_RS00360	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
J5V93_RS00370	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V93_RS00375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V93_RS00380	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V93_RS00385	COG0492	ferredoxin-NADP+ reductase activity
J5V93_RS00395	COG0166	Belongs to the GPI family
J5V93_RS00420	COG5002	protein histidine kinase activity
J5V93_RS00440	COG3541	Predicted nucleotidyltransferase
J5V93_RS00445	COG2814	Major facilitator Superfamily
J5V93_RS00450	COG0723	plastoquinol--plastocyanin reductase activity
J5V93_RS00450	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V93_RS00460	COG0765	amino acid transport
J5V93_RS00465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V93_RS00475	COG3290	protein histidine kinase activity
J5V93_RS00475	COG0840	transmembrane signaling receptor activity
J5V93_RS00500	COG0549	Belongs to the carbamate kinase family
J5V93_RS00515	COG0277	FAD linked oxidase domain protein
J5V93_RS00520	COG0366	Alpha amylase catalytic
J5V93_RS00525	COG2190	(PTS) system
J5V93_RS00525	COG1263	PTS System
J5V93_RS00525	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V93_RS00545	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
J5V93_RS00550	COG0352	thiamine-phosphate diphosphorylase activity
J5V93_RS00555	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
J5V93_RS00570	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J5V93_RS00575	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J5V93_RS00580	COG1116	anion transmembrane transporter activity
J5V93_RS00585	COG0488	(ABC) transporter
J5V93_RS00630	COG2270	Major facilitator Superfamily
J5V93_RS00660	COG2310	stress, protein
J5V93_RS00665	COG2310	stress, protein
J5V93_RS00670	COG2310	stress, protein
J5V93_RS00675	COG0861	Integral membrane protein TerC family
J5V93_RS00685	COG3853	Toxic anion resistance protein (TelA)
J5V93_RS00695	COG4840	Belongs to the UPF0435 family
J5V93_RS00700	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
J5V93_RS00710	COG1295	ribonuclease BN
J5V93_RS00715	COG2217	Heavy metal translocating P-type atpase
J5V93_RS00720	COG0697	spore germination
J5V93_RS00740	COG0586	Pfam SNARE associated Golgi protein
J5V93_RS00755	COG3871	stress protein (general stress protein 26)
J5V93_RS00760	COG0387	Pfam Sodium calcium exchanger
J5V93_RS00770	COG0535	radical SAM domain protein
J5V93_RS00790	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
J5V93_RS00810	COG3829	transcription factor binding
J5V93_RS00820	COG0833	amino acid
J5V93_RS00825	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5V93_RS00845	COG2066	Belongs to the glutaminase family
J5V93_RS00850	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V93_RS00850	COG1263	PTS System
J5V93_RS00855	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V93_RS00870	COG1216	Glycosyl transferase, family 2
J5V93_RS00880	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
J5V93_RS00880	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5V93_RS00885	COG0463	Glycosyl transferase, family 2
J5V93_RS00900	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
J5V93_RS00905	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
J5V93_RS00920	COG1228	amidohydrolase
J5V93_RS00925	COG1090	epimerase
J5V93_RS00930	COG2137	regulation of response to DNA damage stimulus
J5V93_RS00955	COG1988	membrane-bound metal-dependent
J5V93_RS00960	COG1194	a g-specific adenine glycosylase
J5V93_RS00980	COG3557	Belongs to the UPF0374 family
J5V93_RS00985	COG1132	(ABC) transporter
J5V93_RS00990	COG4129	membrane
J5V93_RS00995	COG0067	glutamate synthase
J5V93_RS00995	COG0069	glutamate synthase activity
J5V93_RS00995	COG0070	glutamate synthase
J5V93_RS01000	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J5V93_RS01005	COG4555	ABC transporter
J5V93_RS01025	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
J5V93_RS01030	COG0735	belongs to the Fur family
J5V93_RS01150	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
J5V93_RS01155	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
J5V93_RS01175	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
J5V93_RS01185	COG2766	serine protein kinase
J5V93_RS01190	COG2718	Belongs to the UPF0229 family
J5V93_RS01205	COG1585	Membrane protein implicated in regulation of membrane protease activity
J5V93_RS01210	COG2268	Band 7 protein
J5V93_RS01220	COG3290	protein histidine kinase activity
J5V93_RS01225	COG4565	transcriptional regulatory protein
J5V93_RS01230	COG2851	Citrate transporter
J5V93_RS01255	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
J5V93_RS01260	COG3842	ATPase activity
J5V93_RS01265	COG1175	transmembrane transport
J5V93_RS01270	COG0395	ABC-type sugar transport system, permease component
J5V93_RS01280	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
J5V93_RS01285	COG0745	RESPONSE REGULATOR receiver
J5V93_RS01290	COG5002	protein histidine kinase activity
J5V93_RS01300	COG4990	cell redox homeostasis
J5V93_RS01310	COG3290	protein histidine kinase activity
J5V93_RS01315	COG4565	transcriptional regulatory protein
J5V93_RS01320	COG3493	citrate carrier protein
J5V93_RS01325	COG0281	malic enzyme
J5V93_RS01335	COG0697	spore germination
J5V93_RS01340	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V93_RS01350	COG5002	protein histidine kinase activity
J5V93_RS01355	COG0745	RESPONSE REGULATOR receiver
J5V93_RS01360	COG0456	acetyltransferase
J5V93_RS01365	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
J5V93_RS01370	COG3383	formate dehydrogenase (NAD+) activity
J5V93_RS01375	COG2427	Protein of unknown function (DUF1641)
J5V93_RS01390	COG0531	amino acid
J5V93_RS01400	COG0640	Transcriptional regulator
J5V93_RS01405	COG2217	Heavy metal translocating P-type atpase
J5V93_RS01410	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
J5V93_RS01425	COG3227	Zinc metalloprotease (Elastase)
J5V93_RS01445	COG2720	vancomycin resistance protein
J5V93_RS01450	COG1316	TRANSCRIPTIONal
J5V93_RS01455	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V93_RS01460	COG0346	lactoylglutathione lyase activity
J5V93_RS01465	COG1253	flavin adenine dinucleotide binding
J5V93_RS01470	COG1027	Aspartate ammonia-lyase
J5V93_RS01475	COG1620	l-lactate permease
J5V93_RS01480	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V93_RS01495	COG3104	oligopeptide transport
J5V93_RS01500	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V93_RS01505	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V93_RS01510	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V93_RS01525	COG0156	8-amino-7-oxononanoate synthase activity
J5V93_RS01530	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5V93_RS01540	COG4548	von Willebrand factor, type A
J5V93_RS01545	COG0714	Associated with various cellular activities
J5V93_RS01565	COG0531	amino acid
J5V93_RS01570	COG2188	Transcriptional regulator
J5V93_RS01575	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V93_RS01575	COG1263	PTS System
J5V93_RS01580	COG0366	Alpha amylase catalytic
J5V93_RS01595	COG0697	spore germination
J5V93_RS01600	COG4585	Histidine kinase
J5V93_RS01605	COG2197	response regulator
J5V93_RS01610	COG1404	Belongs to the peptidase S8 family
J5V93_RS01625	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J5V93_RS01630	COG1115	amino acid carrier protein
J5V93_RS01635	COG1126	abc transporter atp-binding protein
J5V93_RS01640	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V93_RS01645	COG0765	amino acid transport
J5V93_RS01650	COG0765	amino acid transport
J5V93_RS01655	COG0833	amino acid
J5V93_RS01680	COG2378	regulation of single-species biofilm formation
J5V93_RS01685	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
J5V93_RS01690	COG5002	protein histidine kinase activity
J5V93_RS01695	COG0745	RESPONSE REGULATOR receiver
J5V93_RS01705	COG0659	secondary active sulfate transmembrane transporter activity
J5V93_RS01720	COG2271	Major facilitator Superfamily
J5V93_RS01725	COG1846	Transcriptional regulator
J5V93_RS01730	COG0477	Major facilitator Superfamily
J5V93_RS01735	COG1609	Transcriptional regulator
J5V93_RS01740	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J5V93_RS01745	COG1869	D-ribose catabolic process
J5V93_RS01755	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5V93_RS01760	COG1879	ABC-type sugar transport system periplasmic component
J5V93_RS01790	COG1063	alcohol dehydrogenase
J5V93_RS01805	COG3568	Endonuclease Exonuclease Phosphatase
J5V93_RS01835	COG0840	transmembrane signaling receptor activity
J5V93_RS01840	COG1388	LysM domain
J5V93_RS01840	COG3584	3D domain protein
J5V93_RS01845	COG1476	TRANSCRIPTIONal
J5V93_RS01865	COG3104	oligopeptide transport
J5V93_RS01870	COG1114	Component of the transport system for branched-chain amino acids
J5V93_RS01885	COG1113	amino acid transport
J5V93_RS01890	COG2252	PERMEase
J5V93_RS01905	COG2153	protein acetylation
J5V93_RS01915	COG0569	domain protein
J5V93_RS01915	COG0475	glutathione-regulated potassium exporter activity
J5V93_RS01925	COG1845	cytochrome c oxidase, subunit III
J5V93_RS01930	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
J5V93_RS01940	COG0833	amino acid
J5V93_RS01945	COG4990	cell redox homeostasis
J5V93_RS01960	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J5V93_RS01965	COG0697	spore germination
J5V93_RS01970	COG0531	amino acid
J5V93_RS01980	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
J5V93_RS01985	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
J5V93_RS01995	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
J5V93_RS02000	COG0573	inorganic phosphate transmembrane transporter activity
J5V93_RS02005	COG0581	inorganic phosphate transmembrane transporter activity
J5V93_RS02015	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J5V93_RS02135	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
J5V93_RS02150	COG4991	sh3 domain protein
J5V93_RS02150	COG3103	Sh3 type 3 domain protein
J5V93_RS02150	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V93_RS02155	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
J5V93_RS02160	COG1116	anion transmembrane transporter activity
J5V93_RS02165	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J5V93_RS02170	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J5V93_RS02175	COG0352	thiamine-phosphate diphosphorylase activity
J5V93_RS02180	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V93_RS02185	COG2104	thiamine diphosphate biosynthetic process
J5V93_RS02190	COG2022	thiamine diphosphate biosynthetic process
J5V93_RS02195	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V93_RS02200	COG0351	phosphomethylpyrimidine kinase
J5V93_RS02225	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
J5V93_RS02230	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
J5V93_RS02235	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
J5V93_RS02240	COG2205	protein histidine kinase activity
J5V93_RS02245	COG2814	Major facilitator Superfamily
J5V93_RS02250	COG1846	Transcriptional regulator
J5V93_RS02270	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5V93_RS02275	COG1129	ABC transporter
J5V93_RS02280	COG1879	ABC-type sugar transport system periplasmic component
J5V93_RS02285	COG2252	PERMEase
J5V93_RS02290	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS02305	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J5V93_RS02310	COG1621	beta-fructofuranosidase activity
J5V93_RS02315	COG1263	PTS System
J5V93_RS02315	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V93_RS02320	COG1609	Transcriptional regulator
J5V93_RS02370	COG0778	Nitroreductase
J5V93_RS02375	COG2719	SpoVR family
J5V93_RS02400	COG1937	Protein conserved in bacteria
J5V93_RS02405	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V93_RS02405	COG0425	Belongs to the sulfur carrier protein TusA family
J5V93_RS02410	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V93_RS02410	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V93_RS02415	COG0425	Belongs to the sulfur carrier protein TusA family
J5V93_RS02420	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V93_RS02420	COG0425	Belongs to the sulfur carrier protein TusA family
J5V93_RS02425	COG2210	Belongs to the sulfur carrier protein TusA family
J5V93_RS02430	COG0730	response to heat
J5V93_RS02440	COG1316	TRANSCRIPTIONal
J5V93_RS02445	COG0604	alcohol dehydrogenase
J5V93_RS02450	COG1283	sodium-dependent phosphate transmembrane transporter activity
J5V93_RS02455	COG0604	alcohol dehydrogenase
J5V93_RS02460	COG2814	Major facilitator Superfamily
J5V93_RS02470	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V93_RS02470	COG3711	transcriptional antiterminator
J5V93_RS02475	COG1447	Phosphotransferase system cellobiose-specific component IIA
J5V93_RS02480	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V93_RS02505	COG3584	3D domain protein
J5V93_RS02505	COG1388	LysM domain
J5V93_RS02510	COG0577	efflux transmembrane transporter activity
J5V93_RS02515	COG1136	(ABC) transporter
J5V93_RS02525	COG5522	Integral membrane protein (intg_mem_TP0381)
J5V93_RS02540	COG1114	Component of the transport system for branched-chain amino acids
J5V93_RS02545	COG3546	catalase activity
J5V93_RS02575	COG0586	Pfam SNARE associated Golgi protein
J5V93_RS02605	COG0531	amino acid
J5V93_RS02610	COG0475	glutathione-regulated potassium exporter activity
J5V93_RS02620	COG1737	Transcriptional regulator
J5V93_RS02625	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
J5V93_RS02630	COG1263	PTS System
J5V93_RS02630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V93_RS02640	COG2259	Doxx family
J5V93_RS02660	COG0697	spore germination
J5V93_RS02665	COG1522	sequence-specific DNA binding
J5V93_RS02675	COG0300	oxidoreductase activity
J5V93_RS02690	COG2076	Multidrug Resistance protein
J5V93_RS02695	COG1309	transcriptional regulator
J5V93_RS02700	COG2814	Major facilitator Superfamily
J5V93_RS02705	COG1733	regulation of RNA biosynthetic process
J5V93_RS02715	COG2249	NAD(P)H dehydrogenase (quinone) activity
J5V93_RS02725	COG4533	DNA binding
J5V93_RS02730	COG2211	Major facilitator Superfamily
J5V93_RS02745	COG0531	amino acid
J5V93_RS02750	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS02755	COG1132	(ABC) transporter
J5V93_RS02760	COG1132	(ABC) transporter
J5V93_RS02765	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V93_RS02770	COG0765	amino acid transport
J5V93_RS02775	COG1126	abc transporter atp-binding protein
J5V93_RS02790	COG0189	ligase activity
J5V93_RS02800	COG4399	Belongs to the UPF0754 family
J5V93_RS02805	COG3679	Belongs to the UPF0342 family
J5V93_RS02820	COG0028	Belongs to the TPP enzyme family
J5V93_RS02825	COG3527	Alpha-acetolactate decarboxylase
J5V93_RS02830	COG0463	Glycosyl transferase, family 2
J5V93_RS02835	COG1216	Glycosyl transferase, family 2
J5V93_RS02840	COG2094	Belongs to the DNA glycosylase MPG family
J5V93_RS02845	COG0561	phosphatase activity
J5V93_RS02855	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J5V93_RS02860	COG0318	PFAM AMP-dependent synthetase and ligase
J5V93_RS02870	COG0659	secondary active sulfate transmembrane transporter activity
J5V93_RS02885	COG0653	protein targeting
J5V93_RS02890	COG2244	polysaccharide biosynthetic process
J5V93_RS02900	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V93_RS02920	COG1696	Membrane protein involved in D-alanine export
J5V93_RS02935	COG1024	Enoyl-CoA hydratase
J5V93_RS02950	COG1363	Peptidase, m42
J5V93_RS02965	COG2318	DinB family
J5V93_RS02985	COG0579	oxidoreductase
J5V93_RS03020	COG0601	transmembrane transport
J5V93_RS03025	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V93_RS03030	COG0444	Belongs to the ABC transporter superfamily
J5V93_RS03035	COG4608	Belongs to the ABC transporter superfamily
J5V93_RS03135	COG0582	viral genome integration into host DNA
J5V93_RS03235	COG0477	Major facilitator Superfamily
J5V93_RS03240	COG3290	protein histidine kinase activity
J5V93_RS03245	COG4565	transcriptional regulatory protein
J5V93_RS03250	COG3181	Tripartite tricarboxylate transporter family receptor
J5V93_RS03255	COG0494	nUDIX hydrolase
J5V93_RS03260	COG0513	Belongs to the DEAD box helicase family
J5V93_RS03280	COG0326	Molecular chaperone. Has ATPase activity
J5V93_RS03310	COG1475	DNA binding
J5V93_RS03320	COG0305	Participates in initiation and elongation during chromosome replication
J5V93_RS03350	COG0477	Major facilitator Superfamily
J5V93_RS03435	COG2814	Major facilitator Superfamily
J5V93_RS03440	COG0640	Transcriptional regulator
J5V93_RS03460	COG2376	Dihydroxyacetone kinase
J5V93_RS03470	COG2376	Dihydroxyacetone kinase
J5V93_RS03485	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J5V93_RS03500	COG1335	isochorismatase
J5V93_RS03525	COG0076	glutamate decarboxylase activity
J5V93_RS03550	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V93_RS03555	COG1278	Cold shock
J5V93_RS03565	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
J5V93_RS03565	COG3266	domain, Protein
J5V93_RS03565	COG4932	domain protein
J5V93_RS03570	COG0737	Belongs to the 5'-nucleotidase family
J5V93_RS03570	COG4085	toxin activity
J5V93_RS03570	COG1525	nuclease
J5V93_RS03580	COG0582	viral genome integration into host DNA
J5V93_RS03595	COG2378	regulation of single-species biofilm formation
J5V93_RS03600	COG2318	DinB family
J5V93_RS03605	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
J5V93_RS03605	COG3266	domain, Protein
J5V93_RS03605	COG4932	domain protein
J5V93_RS03615	COG0825	malonyl-CoA metabolic process
J5V93_RS03635	COG3237	CsbD-like
J5V93_RS03655	COG2172	sigma factor antagonist activity
J5V93_RS03660	COG1191	sigma factor activity
J5V93_RS03670	COG2208	phosphoserine phosphatase activity
J5V93_RS03675	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
J5V93_RS03680	COG2205	protein histidine kinase activity
J5V93_RS03680	COG5002	protein histidine kinase activity
J5V93_RS03680	COG0784	Response regulator, receiver
J5V93_RS03725	COG2807	transmembrane transport
J5V93_RS03730	COG2186	Transcriptional regulator
J5V93_RS03735	COG4585	Histidine kinase
J5V93_RS03740	COG2197	response regulator
J5V93_RS03770	COG0420	3'-5' exonuclease activity
J5V93_RS03775	COG4717	serine-type aminopeptidase activity
J5V93_RS03780	COG3481	metal-dependent phosphohydrolase, HD sub domain
J5V93_RS03790	COG0346	lactoylglutathione lyase activity
J5V93_RS03795	COG0346	lactoylglutathione lyase activity
J5V93_RS03800	COG0457	Tetratricopeptide repeat
J5V93_RS03810	COG2267	carboxylic ester hydrolase activity
J5V93_RS03835	COG3620	sequence-specific DNA binding
J5V93_RS03840	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
J5V93_RS03845	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
J5V93_RS03850	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
J5V93_RS03855	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
J5V93_RS03860	COG1595	DNA-templated transcription, initiation
J5V93_RS03875	COG3973	AAA domain
J5V93_RS03880	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J5V93_RS03895	COG1846	Transcriptional regulator
J5V93_RS03905	COG0537	adenosine 5'-monophosphoramidase activity
J5V93_RS03910	COG1131	(ABC) transporter
J5V93_RS03915	COG4473	ABC transporter
J5V93_RS03935	COG2222	sugar isomerase
J5V93_RS03945	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V93_RS03950	COG3715	PTS system
J5V93_RS03955	COG3716	PTS system mannose fructose sorbose family IID component
J5V93_RS03960	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V93_RS03960	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V93_RS03975	COG3684	Belongs to the aldolase LacD family
J5V93_RS03980	COG2188	Transcriptional regulator
J5V93_RS03985	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V93_RS04000	COG0247	lactate metabolic process
J5V93_RS04005	COG1139	Iron-sulfur cluster binding protein
J5V93_RS04010	COG1556	Lactate utilization protein
J5V93_RS04030	COG3402	PFAM membrane-flanked domain
J5V93_RS04035	COG3428	Bacterial PH domain
J5V93_RS04065	COG3402	PFAM membrane-flanked domain
J5V93_RS04070	COG3428	Bacterial PH domain
J5V93_RS04075	COG2329	Antibiotic biosynthesis monooxygenase
J5V93_RS04080	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V93_RS04085	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
J5V93_RS04090	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
J5V93_RS04095	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
J5V93_RS04120	COG1309	transcriptional regulator
J5V93_RS04125	COG1511	domain protein
J5V93_RS04160	COG2378	regulation of single-species biofilm formation
J5V93_RS04165	COG1609	Transcriptional regulator
J5V93_RS04175	COG1234	tRNA 3'-trailer cleavage
J5V93_RS04180	COG0095	Lipoate-protein ligase
J5V93_RS04190	COG0318	PFAM AMP-dependent synthetase and ligase
J5V93_RS04205	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
J5V93_RS04210	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
J5V93_RS04215	COG4208	sulfate ABC transporter
J5V93_RS04230	COG1408	metallophosphoesterase
J5V93_RS04235	COG1078	dGTPase activity
J5V93_RS04250	COG1595	DNA-templated transcription, initiation
J5V93_RS04255	COG3708	Transcriptional regulator
J5V93_RS04255	COG2207	Transcriptional regulator
J5V93_RS04260	COG2205	protein histidine kinase activity
J5V93_RS04265	COG0745	RESPONSE REGULATOR receiver
J5V93_RS04280	COG0501	Belongs to the peptidase M48B family
J5V93_RS04285	COG0697	spore germination
J5V93_RS04310	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
J5V93_RS04315	COG2224	Isocitrate lyase
J5V93_RS04325	COG1278	Cold shock
J5V93_RS04335	COG4903	ComK protein
J5V93_RS04340	COG0398	Pfam SNARE associated Golgi protein
J5V93_RS04350	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
J5V93_RS04355	COG1074	ATP-dependent DNA helicase activity
J5V93_RS04405	COG0179	Fumarylacetoacetate (FAA) hydrolase
J5V93_RS04430	COG0367	asparagine synthase
J5V93_RS04440	COG0753	catalase activity
J5V93_RS04445	COG0004	ammonium transporteR
J5V93_RS04455	COG1666	GTP binding
J5V93_RS04460	COG2996	Protein conserved in bacteria
J5V93_RS04465	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J5V93_RS04475	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V93_RS04490	COG0561	phosphatase activity
J5V93_RS04510	COG2267	carboxylic ester hydrolase activity
J5V93_RS04525	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V93_RS04530	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
J5V93_RS04535	COG5504	Zn-dependent protease
J5V93_RS04545	COG0180	Tryptophanyl-tRNA synthetase
J5V93_RS04555	COG4166	transmembrane transport
J5V93_RS04560	COG0601	transmembrane transport
J5V93_RS04565	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V93_RS04570	COG0444	Belongs to the ABC transporter superfamily
J5V93_RS04575	COG4608	Belongs to the ABC transporter superfamily
J5V93_RS04580	COG0534	Mate efflux family protein
J5V93_RS04585	COG4166	transmembrane transport
J5V93_RS04600	COG0861	Integral membrane protein TerC family
J5V93_RS04605	COG4862	establishment of competence for transformation
J5V93_RS04610	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V93_RS04620	COG1164	Oligoendopeptidase f
J5V93_RS04635	COG2346	COG2346, Truncated hemoglobins
J5V93_RS04640	COG4116	CYTH
J5V93_RS04650	COG2357	RelA SpoT domain protein
J5V93_RS04660	COG0564	pseudouridine synthase activity
J5V93_RS04670	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
J5V93_RS04675	COG0772	Belongs to the SEDS family
J5V93_RS04680	COG1216	Glycosyl transferase, family 2
J5V93_RS04700	COG0463	Glycosyl transferase, family 2
J5V93_RS04700	COG0457	Tetratricopeptide repeat
J5V93_RS04720	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
J5V93_RS04735	COG1091	dTDP-4-dehydrorhamnose reductase activity
J5V93_RS04780	COG2153	protein acetylation
J5V93_RS04785	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
J5V93_RS04790	COG2382	esterase
J5V93_RS04815	COG5492	domain, Protein
J5V93_RS04820	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J5V93_RS04830	COG0512	Glutamine amidotransferase of anthranilate synthase
J5V93_RS04830	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
J5V93_RS04835	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
J5V93_RS04840	COG0134	indole-3-glycerol-phosphate synthase activity
J5V93_RS04845	COG0135	phosphoribosylanthranilate isomerase activity
J5V93_RS04850	COG0133	tryptophan synthase activity
J5V93_RS04855	COG0159	tryptophan synthase activity
J5V93_RS04865	COG1620	l-lactate permease
J5V93_RS04870	COG5634	Uncharacterized conserved protein (DUF2278)
J5V93_RS04905	COG2226	methyltransferase
J5V93_RS04925	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V93_RS04930	COG0567	Dehydrogenase, E1 component
J5V93_RS04935	COG1476	TRANSCRIPTIONal
J5V93_RS04990	COG1686	Belongs to the peptidase S11 family
J5V93_RS04995	COG0681	Belongs to the peptidase S26 family
J5V93_RS05030	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS05040	COG1176	ABC-type spermidine putrescine transport system, permease component I
J5V93_RS05045	COG1177	transmembrane transport
J5V93_RS05050	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
J5V93_RS05060	COG2409	Drug exporters of the RND superfamily
J5V93_RS05070	COG0564	pseudouridine synthase activity
J5V93_RS05080	COG2340	Cysteine-rich secretory protein family
J5V93_RS05085	COG0247	lactate metabolic process
J5V93_RS05090	COG0277	FAD linked oxidase domain protein
J5V93_RS05095	COG3835	regulator
J5V93_RS05105	COG0745	RESPONSE REGULATOR receiver
J5V93_RS05110	COG5002	protein histidine kinase activity
J5V93_RS05115	COG2186	Transcriptional regulator
J5V93_RS05120	COG0247	lactate metabolic process
J5V93_RS05125	COG1139	Iron-sulfur cluster binding protein
J5V93_RS05130	COG1556	Lactate utilization protein
J5V93_RS05135	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
J5V93_RS05145	COG2116	formate transmembrane transporter activity
J5V93_RS05150	COG0861	Integral membrane protein TerC family
J5V93_RS05155	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J5V93_RS05165	COG2030	dehydratase
J5V93_RS05185	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS05190	COG3243	poly(R)-hydroxyalkanoic acid synthase
J5V93_RS05200	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J5V93_RS05215	COG1840	ABC-type Fe3 transport system, periplasmic component
J5V93_RS05220	COG3842	ATPase activity
J5V93_RS05230	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J5V93_RS05235	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
J5V93_RS05245	COG1349	DNA-binding transcription factor activity
J5V93_RS05255	COG0235	Class ii aldolase
J5V93_RS05265	COG2861	carbohydrate metabolic process
J5V93_RS05275	COG3852	Histidine kinase
J5V93_RS05280	COG1846	Transcriptional regulator
J5V93_RS05290	COG2318	DinB family
J5V93_RS05295	COG5002	protein histidine kinase activity
J5V93_RS05300	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
J5V93_RS05305	COG0720	synthase
J5V93_RS05315	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
J5V93_RS05320	COG4873	Protein conserved in bacteria
J5V93_RS05335	COG0456	acetyltransferase
J5V93_RS05350	COG1780	Probably involved in ribonucleotide reductase function
J5V93_RS05365	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J5V93_RS05370	COG0531	amino acid
J5V93_RS05375	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
J5V93_RS05390	COG2204	response regulator
J5V93_RS05395	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS05405	COG1725	Transcriptional regulator
J5V93_RS05410	COG1131	(ABC) transporter
J5V93_RS05420	COG1131	(ABC) transporter
J5V93_RS05425	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J5V93_RS05430	COG1266	CAAX protease self-immunity
J5V93_RS05440	COG1522	sequence-specific DNA binding
J5V93_RS05450	COG1335	isochorismatase
J5V93_RS05460	COG1619	proteins homologs of microcin C7 resistance protein MccF
J5V93_RS05465	COG2070	2-Nitropropane dioxygenase
J5V93_RS05470	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
J5V93_RS05475	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5V93_RS05480	COG1696	Membrane protein involved in D-alanine export
J5V93_RS05505	COG0716	FMN binding
J5V93_RS05565	COG1846	Transcriptional regulator
J5V93_RS05575	COG1301	dicarboxylic acid transport
J5V93_RS05580	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J5V93_RS05590	COG3874	Sporulation protein YtfJ
J5V93_RS05610	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5V93_RS05615	COG0028	Belongs to the TPP enzyme family
J5V93_RS05620	COG0440	acetolactate synthase activity
J5V93_RS05630	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J5V93_RS05640	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
J5V93_RS05650	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
J5V93_RS05655	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
J5V93_RS05665	COG0131	Imidazoleglycerol-phosphate dehydratase
J5V93_RS05670	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
J5V93_RS05675	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
J5V93_RS05680	COG0107	imidazoleglycerol-phosphate synthase activity
J5V93_RS05690	COG0140	phosphoribosyl-ATP diphosphatase activity
J5V93_RS05695	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
J5V93_RS05710	COG1183	phosphatidylcholine synthase activity
J5V93_RS05715	COG1368	sulfuric ester hydrolase activity
J5V93_RS05725	COG0019	diaminopimelate decarboxylase activity
J5V93_RS05735	COG0175	sulfate reduction
J5V93_RS05740	COG2046	Belongs to the sulfate adenylyltransferase family
J5V93_RS05745	COG0529	Catalyzes the synthesis of activated sulfate
J5V93_RS05750	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J5V93_RS05770	COG1648	precorrin-2 dehydrogenase activity
J5V93_RS05775	COG0733	neurotransmitter:sodium symporter activity
J5V93_RS05800	COG1757	Na H antiporter
J5V93_RS05815	COG4758	membrane
J5V93_RS05820	COG4585	Histidine kinase
J5V93_RS05825	COG2197	response regulator
J5V93_RS05835	COG1114	Component of the transport system for branched-chain amino acids
J5V93_RS05845	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
J5V93_RS05885	COG0730	response to heat
J5V93_RS05890	COG0306	phosphate transporter
J5V93_RS05895	COG1392	Phosphate transport regulator
J5V93_RS05900	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V93_RS05915	COG3852	Histidine kinase
J5V93_RS05920	COG1801	Protein of unknown function DUF72
J5V93_RS05930	COG0582	viral genome integration into host DNA
J5V93_RS05935	COG5002	protein histidine kinase activity
J5V93_RS05950	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
J5V93_RS05950	COG0392	lysyltransferase activity
J5V93_RS05965	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J5V93_RS05970	COG1686	Belongs to the peptidase S11 family
J5V93_RS05975	COG2715	membrane protein required for spore maturation
J5V93_RS05980	COG0700	Nucleoside recognition
J5V93_RS05985	COG1187	pseudouridine synthase activity
J5V93_RS05995	COG1333	cytochrome c biogenesis protein
J5V93_RS06000	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J5V93_RS06005	COG0745	RESPONSE REGULATOR receiver
J5V93_RS06010	COG5002	protein histidine kinase activity
J5V93_RS06015	COG2096	Adenosyltransferase
J5V93_RS06020	COG4942	peptidase
J5V93_RS06030	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
J5V93_RS06035	COG1141	Ferredoxin
J5V93_RS06040	COG4955	Helix-turn-helix domain
J5V93_RS06045	COG0514	ATP-dependent DNA helicase (RecQ)
J5V93_RS06050	COG1266	CAAX protease self-immunity
J5V93_RS06060	COG1408	metallophosphoesterase
J5V93_RS06075	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
J5V93_RS06095	COG0492	ferredoxin-NADP+ reductase activity
J5V93_RS06100	COG0252	asparaginase activity
J5V93_RS06110	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
J5V93_RS06120	COG1304	FMN binding
J5V93_RS06150	COG1160	GTP binding
J5V93_RS06155	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
J5V93_RS06175	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J5V93_RS06185	COG0302	gtp cyclohydrolase
J5V93_RS06190	COG0142	geranyltranstransferase activity
J5V93_RS06195	COG2226	methyltransferase
J5V93_RS06200	COG0142	geranyltranstransferase activity
J5V93_RS06215	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
J5V93_RS06225	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
J5V93_RS06230	COG0457	Tetratricopeptide repeat
J5V93_RS06235	COG5582	Belongs to the UPF0302 family
J5V93_RS06250	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
J5V93_RS06265	COG4347	Protein of unknown function (DUF1405)
J5V93_RS06280	COG2738	Putative neutral zinc metallopeptidase
J5V93_RS06290	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V93_RS06295	COG1694	Mazg nucleotide pyrophosphohydrolase
J5V93_RS06300	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
J5V93_RS06305	COG1803	Methylglyoxal synthase
J5V93_RS06310	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V93_RS06315	COG0438	transferase activity, transferring glycosyl groups
J5V93_RS06320	COG0617	tRNA 3'-terminal CCA addition
J5V93_RS06330	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
J5V93_RS06335	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
J5V93_RS06345	COG1199	ATP-dependent helicase activity
J5V93_RS06345	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
J5V93_RS06365	COG3935	DnaD domain protein
J5V93_RS06370	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
J5V93_RS06380	COG4499	WXG100 protein secretion system (Wss), protein YukC
J5V93_RS06380	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V93_RS06385	COG3331	DNA recombination
J5V93_RS06420	COG4474	Belongs to the UPF0398 family
J5V93_RS06425	COG3599	regulation of cell shape
J5V93_RS06435	COG0116	Belongs to the methyltransferase superfamily
J5V93_RS06445	COG1199	ATP-dependent helicase activity
J5V93_RS06450	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
J5V93_RS06460	COG0024	Methionine aminopeptidase
J5V93_RS06470	COG2233	PERMEase
J5V93_RS06475	COG2311	Membrane
J5V93_RS06485	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J5V93_RS06495	COG0456	acetyltransferase
J5V93_RS06505	COG2897	thiosulfate sulfurtransferase activity
J5V93_RS06545	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J5V93_RS06560	COG0454	-acetyltransferase
J5V93_RS06580	COG0328	RNA-DNA hybrid ribonuclease activity
J5V93_RS06615	COG3403	YqcI/YcgG family
J5V93_RS06620	COG1280	lysine exporter protein (LysE YggA)
J5V93_RS06635	COG3162	membrane
J5V93_RS06640	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J5V93_RS06645	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V93_RS06655	COG0475	glutathione-regulated potassium exporter activity
J5V93_RS06660	COG4978	Transcriptional regulator
J5V93_RS06660	COG0789	Transcriptional regulator
J5V93_RS06670	COG2323	membrane
J5V93_RS06675	COG1434	Gram-negative-bacterium-type cell wall biogenesis
J5V93_RS06705	COG2814	Major facilitator Superfamily
J5V93_RS06725	COG1923	regulation of RNA biosynthetic process
J5V93_RS06735	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
J5V93_RS06740	COG1360	Flagellar Motor Protein
J5V93_RS06745	COG2201	protein-glutamate methylesterase activity
J5V93_RS06750	COG2198	Histidine kinase
J5V93_RS06750	COG0643	Histidine kinase
J5V93_RS06755	COG1776	CheC inhibitor of MCP methylation
J5V93_RS06755	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V93_RS06770	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
J5V93_RS06790	COG1256	bacterial-type flagellum assembly
J5V93_RS06795	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J5V93_RS06815	COG1815	bacterial-type flagellum-dependent cell motility
J5V93_RS06820	COG1558	bacterial-type flagellum-dependent cell motility
J5V93_RS06830	COG1766	The M ring may be actively involved in energy transduction
J5V93_RS06835	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V93_RS06845	COG1157	protein secretion by the type III secretion system
J5V93_RS06865	COG1749	Flagellar hook protein flgE
J5V93_RS06880	COG0784	Response regulator, receiver
J5V93_RS06880	COG0835	chemotaxis
J5V93_RS06900	COG0861	Integral membrane protein TerC family
J5V93_RS06910	COG3383	formate dehydrogenase (NAD+) activity
J5V93_RS06915	COG2427	Protein of unknown function (DUF1641)
J5V93_RS06920	COG5609	conserved protein (DUF2294)
J5V93_RS06925	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
J5V93_RS06935	COG2116	formate transmembrane transporter activity
J5V93_RS06940	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V93_RS06945	COG0303	'Molybdopterin
J5V93_RS06950	COG0314	molybdopterin synthase activity
J5V93_RS06955	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
J5V93_RS06965	COG0489	protein tyrosine kinase activity
J5V93_RS06970	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J5V93_RS06975	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J5V93_RS06980	COG0741	lytic transglycosylase activity
J5V93_RS06990	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V93_RS06995	COG1776	CheC inhibitor of MCP methylation
J5V93_RS06995	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V93_RS07005	COG1338	Plays a role in the flagellum-specific transport system
J5V93_RS07010	COG1987	bacterial-type flagellum assembly
J5V93_RS07020	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
J5V93_RS07025	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
J5V93_RS07030	COG1419	protein localization to endoplasmic reticulum
J5V93_RS07035	COG4786	Flagellar basal body rod
J5V93_RS07040	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J5V93_RS07070	COG0412	Dienelactone hydrolase
J5V93_RS07075	COG2329	Antibiotic biosynthesis monooxygenase
J5V93_RS07090	COG2814	Major facilitator Superfamily
J5V93_RS07100	COG0583	DNA-binding transcription factor activity
J5V93_RS07105	COG3842	ATPase activity
J5V93_RS07155	COG0406	alpha-ribazole phosphatase activity
J5V93_RS07185	COG0367	asparagine synthase
J5V93_RS07215	COG1802	Transcriptional regulator
J5V93_RS07220	COG0697	spore germination
J5V93_RS07230	COG0438	transferase activity, transferring glycosyl groups
J5V93_RS07230	COG1216	Glycosyl transferase, family 2
J5V93_RS07235	COG1757	Na H antiporter
J5V93_RS07245	COG0277	FAD linked oxidase domain protein
J5V93_RS07265	COG0534	Mate efflux family protein
J5V93_RS07270	COG3340	Belongs to the peptidase S51 family
J5V93_RS07290	COG0785	Cytochrome C biogenesis protein
J5V93_RS07295	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V93_RS07310	COG3048	D-serine ammonia-lyase activity
J5V93_RS07315	COG2733	membrane
J5V93_RS07350	COG1131	(ABC) transporter
J5V93_RS07365	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V93_RS07400	COG0528	UMP kinase activity
J5V93_RS07410	COG1027	Aspartate ammonia-lyase
J5V93_RS07415	COG0281	malic enzyme
J5V93_RS07420	COG4191	Histidine kinase
J5V93_RS07425	COG0784	Response regulator, receiver
J5V93_RS07430	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5V93_RS07440	COG2502	aspartate--ammonia ligase
J5V93_RS07475	COG1051	belongs to the nudix hydrolase family
J5V93_RS07480	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V93_RS07490	COG2814	Major facilitator Superfamily
J5V93_RS07520	COG0477	Major facilitator Superfamily
J5V93_RS07525	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V93_RS07535	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
J5V93_RS07540	COG2223	nitrite transmembrane transporter activity
J5V93_RS07545	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J5V93_RS07560	COG2244	polysaccharide biosynthetic process
J5V93_RS07565	COG0733	neurotransmitter:sodium symporter activity
J5V93_RS07575	COG5566	PFAM Mor transcription activator
J5V93_RS07580	COG2323	membrane
J5V93_RS07595	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5V93_RS07605	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5V93_RS07610	COG0028	Belongs to the TPP enzyme family
J5V93_RS07625	COG0129	dihydroxy-acid dehydratase activity
J5V93_RS07630	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
J5V93_RS07655	COG2814	Major facilitator Superfamily
J5V93_RS07660	COG3384	dioxygenase
J5V93_RS07685	COG4166	transmembrane transport
J5V93_RS07710	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V93_RS07730	COG1914	H( )-stimulated, divalent metal cation uptake system
J5V93_RS07735	COG1054	Belongs to the UPF0176 family
J5V93_RS07745	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
J5V93_RS07750	COG0531	amino acid
J5V93_RS07785	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J5V93_RS07800	COG4257	antibiotic catabolic process
J5V93_RS07805	COG2390	Transcriptional regulator
J5V93_RS07815	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
J5V93_RS07820	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V93_RS07825	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
J5V93_RS07840	COG4846	Membrane protein involved in cytochrome C biogenesis
J5V93_RS07855	COG0583	DNA-binding transcription factor activity
J5V93_RS07875	COG0006	proline dipeptidase activity
J5V93_RS07880	COG2132	Multicopper oxidase
J5V93_RS07890	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J5V93_RS07910	COG1114	Component of the transport system for branched-chain amino acids
J5V93_RS07920	COG4641	Protein conserved in bacteria
J5V93_RS07930	COG1276	copper resistance
J5V93_RS07930	COG2372	response to copper ion
J5V93_RS07935	COG4549	nuclear export factor GLE1
J5V93_RS07945	COG0697	spore germination
J5V93_RS07950	COG0583	DNA-binding transcription factor activity
J5V93_RS07955	COG1959	2 iron, 2 sulfur cluster binding
J5V93_RS07960	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
J5V93_RS07965	COG0778	Nitroreductase
J5V93_RS07975	COG0628	permease
J5V93_RS07990	COG1231	oxidoreductase activity
J5V93_RS07995	COG0523	cobalamin synthesis protein
J5V93_RS08005	COG0318	PFAM AMP-dependent synthetase and ligase
J5V93_RS08010	COG2030	dehydratase
J5V93_RS08015	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V93_RS08030	COG0411	ABC transporter
J5V93_RS08050	COG0583	DNA-binding transcription factor activity
J5V93_RS08060	COG1942	4-Oxalocrotonate Tautomerase
J5V93_RS08075	COG0346	lactoylglutathione lyase activity
J5V93_RS08085	COG1271	oxidase subunit
J5V93_RS08090	COG1294	oxidase, subunit
J5V93_RS08095	COG4988	ABC transporter
J5V93_RS08100	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
J5V93_RS08130	COG1686	Belongs to the peptidase S11 family
J5V93_RS08145	COG0791	NLP P60 protein
J5V93_RS08145	COG1388	LysM domain
J5V93_RS08155	COG1132	(ABC) transporter
J5V93_RS08160	COG0745	RESPONSE REGULATOR receiver
J5V93_RS08165	COG5002	protein histidine kinase activity
J5V93_RS08170	COG0300	oxidoreductase activity
J5V93_RS08175	COG4122	O-methyltransferase activity
J5V93_RS08205	COG0460	homoserine dehydrogenase
J5V93_RS08215	COG0083	homoserine kinase activity
J5V93_RS08230	COG1316	TRANSCRIPTIONal
J5V93_RS08250	COG1285	pathogenesis
J5V93_RS08255	COG1247	-acetyltransferase
J5V93_RS08275	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5V93_RS08285	COG1082	Xylose isomerase domain protein TIM barrel
J5V93_RS08295	COG2814	Major facilitator Superfamily
J5V93_RS08300	COG1279	arginine transmembrane transporter activity
J5V93_RS08305	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V93_RS08315	COG1752	Esterase of the alpha-beta hydrolase superfamily
J5V93_RS08345	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
J5V93_RS08350	COG0577	efflux transmembrane transporter activity
J5V93_RS08355	COG2002	toxin-antitoxin pair type II binding
J5V93_RS08360	COG1404	Belongs to the peptidase S8 family
J5V93_RS08370	COG3842	ATPase activity
J5V93_RS08375	COG2508	Transcriptional regulator
J5V93_RS08385	COG1653	transport
J5V93_RS08390	COG1175	transmembrane transport
J5V93_RS08395	COG0395	ABC-type sugar transport system, permease component
J5V93_RS08400	COG5426	von Willebrand factor, type A
J5V93_RS08410	COG1940	carbohydrate kinase activity
J5V93_RS08415	COG2222	sugar isomerase
J5V93_RS08425	COG1105	Belongs to the carbohydrate kinase PfkB family
J5V93_RS08430	COG3684	Belongs to the aldolase LacD family
J5V93_RS08435	COG0366	Alpha amylase catalytic
J5V93_RS08440	COG0366	Alpha amylase catalytic
J5V93_RS08445	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
J5V93_RS08450	COG0640	Transcriptional regulator
J5V93_RS08455	COG0667	Aldo Keto reductase
J5V93_RS08500	COG3949	Membrane
J5V93_RS08505	COG0783	Belongs to the Dps family
J5V93_RS08520	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J5V93_RS08530	COG1231	oxidoreductase activity
J5V93_RS08535	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V93_RS08540	COG4989	oxidoreductase activity
J5V93_RS08545	COG0523	cobalamin synthesis protein
J5V93_RS08550	COG0456	acetyltransferase
J5V93_RS08555	COG0803	Belongs to the bacterial solute-binding protein 9 family
J5V93_RS08570	COG1902	pentaerythritol trinitrate reductase activity
J5V93_RS08575	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
J5V93_RS08585	COG4166	transmembrane transport
J5V93_RS08590	COG0346	lactoylglutathione lyase activity
J5V93_RS08600	COG0406	alpha-ribazole phosphatase activity
J5V93_RS08610	COG5337	Spore coat protein CotH
J5V93_RS08615	COG1051	belongs to the nudix hydrolase family
J5V93_RS08620	COG0586	Pfam SNARE associated Golgi protein
J5V93_RS08625	COG2244	polysaccharide biosynthetic process
J5V93_RS08635	COG0701	Predicted permease
J5V93_RS08640	COG3689	TIGRFAM TIGR03943 family protein
J5V93_RS08645	COG1607	acyl-coa hydrolase
J5V93_RS08655	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V93_RS08670	COG0702	epimerase
J5V93_RS08675	COG2839	Protein conserved in bacteria
J5V93_RS08680	COG1253	flavin adenine dinucleotide binding
J5V93_RS08695	COG1114	Component of the transport system for branched-chain amino acids
J5V93_RS08700	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5V93_RS08715	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V93_RS08725	COG1876	peptidase activity
J5V93_RS08740	COG2211	Major facilitator Superfamily
J5V93_RS08755	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V93_RS08765	COG0561	phosphatase activity
J5V93_RS08775	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J5V93_RS08790	COG1819	glycosyl
J5V93_RS08795	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V93_RS08800	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V93_RS08825	COG0456	acetyltransferase
J5V93_RS08860	COG4499	WXG100 protein secretion system (Wss), protein YukC
J5V93_RS08945	COG3874	Sporulation protein YtfJ
J5V93_RS08970	COG2226	methyltransferase
J5V93_RS08990	COG1082	Xylose isomerase domain protein TIM barrel
J5V93_RS08995	COG0346	lactoylglutathione lyase activity
J5V93_RS09005	COG0604	alcohol dehydrogenase
J5V93_RS09010	COG1595	DNA-templated transcription, initiation
J5V93_RS09035	COG0426	domain, Protein
J5V93_RS09035	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
J5V93_RS09045	COG0386	Belongs to the glutathione peroxidase family
J5V93_RS09050	COG1305	Transglutaminase-like
J5V93_RS09055	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
J5V93_RS09060	COG0714	Associated with various cellular activities
J5V93_RS09065	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
J5V93_RS09095	COG2359	stage V sporulation protein S
J5V93_RS09105	COG2856	Zn peptidase
J5V93_RS09135	COG1396	sequence-specific DNA binding
J5V93_RS09190	COG3344	reverse transcriptase
J5V93_RS09230	COG0582	viral genome integration into host DNA
J5V93_RS09235	COG2267	carboxylic ester hydrolase activity
J5V93_RS09255	COG0582	viral genome integration into host DNA
J5V93_RS09270	COG5484	DNA packaging
J5V93_RS09275	COG1783	phage Terminase large subunit
J5V93_RS09290	COG0338	D12 class N6 adenine-specific DNA methyltransferase
J5V93_RS09295	COG4653	Phage capsid family
J5V93_RS09425	COG1418	mRNA catabolic process
J5V93_RS09430	COG0488	(ABC) transporter
J5V93_RS09450	COG1413	lyase activity
J5V93_RS09465	COG2136	Putative SAM-dependent methyltransferase
J5V93_RS09465	COG2521	methyltransferase
J5V93_RS09470	COG0018	arginyl-trna synthetase
J5V93_RS09520	COG0017	Asparaginyl-tRNA synthetase
J5V93_RS09525	COG0733	neurotransmitter:sodium symporter activity
J5V93_RS09550	COG2610	gluconate transmembrane transporter activity
J5V93_RS09560	COG1794	racemase activity, acting on amino acids and derivatives
J5V93_RS09570	COG0456	acetyltransferase
J5V93_RS09575	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
J5V93_RS09585	COG1131	(ABC) transporter
J5V93_RS09590	COG4473	ABC transporter
J5V93_RS09600	COG0546	phosphoglycolate phosphatase activity
J5V93_RS09615	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V93_RS09630	COG0768	penicillin binding
J5V93_RS09640	COG0204	Acyl-transferase
J5V93_RS09645	COG1272	protein, Hemolysin III
J5V93_RS09650	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
J5V93_RS09655	COG0805	protein transport
J5V93_RS09670	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
J5V93_RS09675	COG1999	signal sequence binding
J5V93_RS09680	COG0071	Belongs to the small heat shock protein (HSP20) family
J5V93_RS09685	COG0367	asparagine synthase
J5V93_RS09700	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V93_RS09705	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V93_RS09710	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5V93_RS09725	COG1335	isochorismatase
J5V93_RS09735	COG0668	transmembrane transport
J5V93_RS09740	COG4585	Histidine kinase
J5V93_RS09740	COG2203	Gaf domain
J5V93_RS09745	COG2197	response regulator
J5V93_RS09750	COG1737	Transcriptional regulator
J5V93_RS09755	COG1064	alcohol dehydrogenase
J5V93_RS09770	COG1070	Carbohydrate kinase
J5V93_RS09780	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
J5V93_RS09800	COG0517	IMP dehydrogenase activity
J5V93_RS09800	COG1125	glycine betaine transport
J5V93_RS09805	COG1174	glycine betaine transport
J5V93_RS09840	COG1253	flavin adenine dinucleotide binding
J5V93_RS09845	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS09850	COG5506	Protein of unknown function (DUF1694)
J5V93_RS09865	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V93_RS09870	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
J5V93_RS09875	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
J5V93_RS09880	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5V93_RS09885	COG0456	acetyltransferase
J5V93_RS09890	COG3829	transcription factor binding
J5V93_RS09895	COG1509	lysine 2,3-aminomutase activity
J5V93_RS09905	COG4479	Belongs to the UPF0346 family
J5V93_RS09930	COG0515	serine threonine protein kinase
J5V93_RS09930	COG3064	Membrane
J5V93_RS09930	COG4991	sh3 domain protein
J5V93_RS09940	COG0671	phosphoesterase, PA-phosphatase related
J5V93_RS09945	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J5V93_RS09950	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V93_RS10005	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J5V93_RS10035	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS10055	COG4499	WXG100 protein secretion system (Wss), protein YukC
J5V93_RS10055	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V93_RS10075	COG0372	Belongs to the citrate synthase family
J5V93_RS10080	COG2079	MmgE PrpD family protein
J5V93_RS10085	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
J5V93_RS10090	COG1960	acyl-CoA dehydrogenase activity
J5V93_RS10095	COG2084	Dehydrogenase
J5V93_RS10100	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS10105	COG1280	lysine exporter protein (LysE YggA)
J5V93_RS10110	COG1024	Enoyl-CoA hydratase
J5V93_RS10125	COG0420	3'-5' exonuclease activity
J5V93_RS10150	COG2223	nitrite transmembrane transporter activity
J5V93_RS10155	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS10160	COG1169	isochorismate synthase
J5V93_RS10165	COG1021	2,3-dihydroxybenzoate-AMP ligase
J5V93_RS10170	COG3433	isochorismatase activity
J5V93_RS10170	COG1535	isochorismatase
J5V93_RS10175	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J5V93_RS10180	COG3251	PFAM MbtH domain protein
J5V93_RS10185	COG2814	Major facilitator Superfamily
J5V93_RS10200	COG0776	regulation of translation
J5V93_RS10210	COG2318	DinB family
J5V93_RS10215	COG1115	amino acid carrier protein
J5V93_RS10230	COG2329	Antibiotic biosynthesis monooxygenase
J5V93_RS10240	COG1187	pseudouridine synthase activity
J5V93_RS10245	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J5V93_RS10250	COG3655	Transcriptional regulator
J5V93_RS10260	COG1136	(ABC) transporter
J5V93_RS10270	COG0596	Alpha beta hydrolase
J5V93_RS10285	COG0028	Belongs to the TPP enzyme family
J5V93_RS10310	COG1253	flavin adenine dinucleotide binding
J5V93_RS10340	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
J5V93_RS10360	COG1846	Transcriptional regulator
J5V93_RS10370	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V93_RS10375	COG1309	transcriptional regulator
J5V93_RS10405	COG1247	-acetyltransferase
J5V93_RS10435	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
J5V93_RS10445	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V93_RS10475	COG0583	DNA-binding transcription factor activity
J5V93_RS10480	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J5V93_RS10495	COG0583	DNA-binding transcription factor activity
J5V93_RS10500	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
J5V93_RS10505	COG2258	MOSC domain
J5V93_RS10520	COG1132	(ABC) transporter
J5V93_RS10525	COG1132	(ABC) transporter
J5V93_RS10540	COG0189	ligase activity
J5V93_RS10550	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V93_RS10560	COG4974	Belongs to the 'phage' integrase family
J5V93_RS10585	COG1396	sequence-specific DNA binding
J5V93_RS10620	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
J5V93_RS10625	COG1595	DNA-templated transcription, initiation
J5V93_RS10700	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
J5V93_RS10700	COG2755	lipolytic protein G-D-S-L family
J5V93_RS10710	COG2169	Transcriptional regulator
J5V93_RS10720	COG0673	inositol 2-dehydrogenase activity
J5V93_RS10780	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
J5V93_RS10785	COG2971	BadF BadG BcrA BcrD
J5V93_RS10795	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
J5V93_RS10835	COG1309	transcriptional regulator
J5V93_RS10850	COG1136	(ABC) transporter
J5V93_RS10850	COG0577	efflux transmembrane transporter activity
J5V93_RS10855	COG0500	methyltransferase
J5V93_RS10855	COG3615	Tellurite resistance protein tehB
J5V93_RS10865	COG0693	protein deglycase activity
J5V93_RS10875	COG0588	phosphoglycerate mutase activity
J5V93_RS10900	COG2195	Cleaves the N-terminal amino acid of tripeptides
J5V93_RS10910	COG0110	maltose O-acetyltransferase activity
J5V93_RS10915	COG1136	(ABC) transporter
J5V93_RS10945	COG1136	(ABC) transporter
J5V93_RS10950	COG0577	efflux transmembrane transporter activity
J5V93_RS10970	COG1686	Belongs to the peptidase S11 family
J5V93_RS10995	COG0768	penicillin binding
J5V93_RS11000	COG0745	RESPONSE REGULATOR receiver
J5V93_RS11005	COG2205	protein histidine kinase activity
J5V93_RS11010	COG1136	(ABC) transporter
J5V93_RS11015	COG0577	efflux transmembrane transporter activity
J5V93_RS11025	COG1595	DNA-templated transcription, initiation
J5V93_RS11035	COG0768	penicillin binding
J5V93_RS11040	COG0768	penicillin binding
J5V93_RS11075	COG1252	NADH dehydrogenase
J5V93_RS11080	COG0425	Belongs to the sulfur carrier protein TusA family
J5V93_RS11080	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V93_RS11095	COG0697	spore germination
J5V93_RS11120	COG3397	chitin binding
J5V93_RS11125	COG0823	Involved in the tonB-independent uptake of proteins
J5V93_RS11135	COG1408	metallophosphoesterase
J5V93_RS11145	COG1131	(ABC) transporter
J5V93_RS11155	COG1309	transcriptional regulator
J5V93_RS11165	COG1960	acyl-CoA dehydrogenase activity
J5V93_RS11170	COG0439	Biotin carboxylase
J5V93_RS11175	COG0511	ligase activity, forming carbon-carbon bonds
J5V93_RS11180	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J5V93_RS11185	COG1024	Enoyl-CoA hydratase
J5V93_RS11190	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
J5V93_RS11195	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J5V93_RS11210	COG3344	reverse transcriptase
J5V93_RS11280	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V93_RS11310	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
J5V93_RS11340	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS11345	COG1733	regulation of RNA biosynthetic process
J5V93_RS11370	COG1309	transcriptional regulator
J5V93_RS11400	COG0697	spore germination
J5V93_RS11405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V93_RS11440	COG2323	membrane
J5V93_RS11455	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V93_RS11460	COG0697	spore germination
J5V93_RS11480	COG0201	protein transport
J5V93_RS11490	COG0737	Belongs to the 5'-nucleotidase family
J5V93_RS11495	COG3227	Zinc metalloprotease (Elastase)
J5V93_RS11500	COG1523	belongs to the glycosyl hydrolase 13 family
J5V93_RS11515	COG0076	glutamate decarboxylase activity
J5V93_RS11520	COG0657	acetylesterase activity
J5V93_RS11525	COG1073	alpha beta
J5V93_RS11535	COG0577	efflux transmembrane transporter activity
J5V93_RS11540	COG1136	(ABC) transporter
J5V93_RS11555	COG5002	protein histidine kinase activity
J5V93_RS11560	COG0745	RESPONSE REGULATOR receiver
J5V93_RS11595	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V93_RS11600	COG1183	phosphatidylcholine synthase activity
J5V93_RS11610	COG1132	(ABC) transporter
J5V93_RS11615	COG3961	Belongs to the TPP enzyme family
J5V93_RS11635	COG0322	excinuclease ABC activity
J5V93_RS11660	COG2318	DinB family
J5V93_RS11675	COG4667	esterase of the alpha-beta hydrolase superfamily
J5V93_RS11730	COG1051	belongs to the nudix hydrolase family
J5V93_RS11735	COG0592	DNA-directed DNA polymerase activity
J5V93_RS11740	COG2816	NAD+ diphosphatase activity
J5V93_RS11750	COG2223	nitrite transmembrane transporter activity
J5V93_RS11760	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V93_RS11770	COG0494	nUDIX hydrolase
J5V93_RS11790	COG0697	spore germination
J5V93_RS11810	COG0584	glycerophosphoryl diester phosphodiesterase
J5V93_RS11825	COG2814	Major facilitator Superfamily
J5V93_RS11865	COG0768	penicillin binding
J5V93_RS11870	COG0671	phosphoesterase, PA-phosphatase related
J5V93_RS11875	COG0604	alcohol dehydrogenase
J5V93_RS11880	COG5002	protein histidine kinase activity
J5V93_RS11885	COG0745	RESPONSE REGULATOR receiver
J5V93_RS11895	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V93_RS11905	COG2205	protein histidine kinase activity
J5V93_RS11920	COG1122	ATPase activity
J5V93_RS11925	COG4720	Psort location CytoplasmicMembrane, score
J5V93_RS11930	COG1794	racemase activity, acting on amino acids and derivatives
J5V93_RS11935	COG1819	glycosyl
J5V93_RS11945	COG0768	penicillin binding
J5V93_RS11950	COG5002	protein histidine kinase activity
J5V93_RS11955	COG0561	phosphatase activity
J5V93_RS12000	COG2124	cytochrome p450
J5V93_RS12045	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
J5V93_RS12055	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V93_RS12060	COG0460	homoserine dehydrogenase
J5V93_RS12080	COG0577	efflux transmembrane transporter activity
J5V93_RS12085	COG1136	(ABC) transporter
J5V93_RS12095	COG0488	(ABC) transporter
J5V93_RS12100	COG0667	Aldo Keto reductase
J5V93_RS12105	COG0583	DNA-binding transcription factor activity
J5V93_RS12110	COG2205	protein histidine kinase activity
J5V93_RS12115	COG0745	RESPONSE REGULATOR receiver
J5V93_RS12125	COG3773	Cell wall hydrolase
J5V93_RS12130	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
J5V93_RS12140	COG3386	PFAM SMP-30 Gluconolaconase
J5V93_RS12180	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V93_RS12195	COG2959	enzyme of heme biosynthesis
J5V93_RS12220	COG3483	tryptophan 2,3-dioxygenase activity
J5V93_RS12225	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
J5V93_RS12230	COG3844	kynureninase activity
J5V93_RS12235	COG1309	transcriptional regulator
J5V93_RS12250	COG3284	Transcriptional regulator
J5V93_RS12265	COG1349	DNA-binding transcription factor activity
J5V93_RS12285	COG1959	2 iron, 2 sulfur cluster binding
J5V93_RS12300	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J5V93_RS12305	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V93_RS12310	COG0022	dehydrogenase e1 component
J5V93_RS12315	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J5V93_RS12335	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS12340	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V93_RS12340	COG0456	acetyltransferase
J5V93_RS12370	COG4176	ABC-type proline glycine betaine transport system permease component
J5V93_RS12375	COG0517	IMP dehydrogenase activity
J5V93_RS12375	COG4175	Glycine betaine
J5V93_RS12400	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
J5V93_RS12405	COG2153	protein acetylation
J5V93_RS12410	COG3397	chitin binding
J5V93_RS12420	COG1819	glycosyl
J5V93_RS12435	COG2205	protein histidine kinase activity
J5V93_RS12440	COG2315	Protein conserved in bacteria
J5V93_RS12485	COG3973	AAA domain
J5V93_RS12495	COG2105	PFAM AIG2 family protein
J5V93_RS12500	COG0514	ATP-dependent DNA helicase (RecQ)
J5V93_RS12520	COG4637	Psort location Cytoplasmic, score
J5V93_RS12530	COG1227	inorganic diphosphatase activity
J5V93_RS12535	COG3397	chitin binding
J5V93_RS12540	COG2318	DinB family
J5V93_RS12560	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J5V93_RS12565	COG1115	amino acid carrier protein
J5V93_RS12570	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS12575	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
J5V93_RS12585	COG3938	Belongs to the proline racemase family
J5V93_RS12590	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V93_RS12630	COG0586	Pfam SNARE associated Golgi protein
J5V93_RS12645	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
J5V93_RS12650	COG4166	transmembrane transport
J5V93_RS12660	COG4948	Mandelate Racemase Muconate Lactonizing
J5V93_RS12680	COG0667	Aldo Keto reductase
J5V93_RS12720	COG2936	dipeptidyl-peptidase activity
J5V93_RS12730	COG0745	RESPONSE REGULATOR receiver
J5V93_RS12760	COG1164	Oligoendopeptidase f
J5V93_RS12765	COG0531	amino acid
J5V93_RS12770	COG1522	sequence-specific DNA binding
J5V93_RS12785	COG1307	EDD domain protein, DegV family
J5V93_RS12810	COG1335	isochorismatase
J5V93_RS12825	COG2814	Major facilitator Superfamily
J5V93_RS12835	COG1664	Polymer-forming cytoskeletal
J5V93_RS12840	COG0789	Transcriptional regulator
J5V93_RS12845	COG4533	DNA binding
J5V93_RS12850	COG0477	Major facilitator Superfamily
J5V93_RS12850	COG2814	Major facilitator Superfamily
J5V93_RS12870	COG2261	transglycosylase associated protein
J5V93_RS12885	COG2226	methyltransferase
J5V93_RS12920	COG0436	Aminotransferase
J5V93_RS12925	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
J5V93_RS12955	COG1131	(ABC) transporter
J5V93_RS12960	COG2188	Transcriptional regulator
J5V93_RS13005	COG0628	permease
J5V93_RS13050	COG2746	aminoglycoside 3-N-acetyltransferase activity
J5V93_RS13060	COG0697	spore germination
J5V93_RS13065	COG2318	DinB family
J5V93_RS13115	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V93_RS13125	COG2814	Major facilitator Superfamily
J5V93_RS13130	COG1368	sulfuric ester hydrolase activity
J5V93_RS13145	COG0488	(ABC) transporter
J5V93_RS13150	COG1033	growth of symbiont in host cell
J5V93_RS13150	COG2409	Drug exporters of the RND superfamily
J5V93_RS13155	COG1309	transcriptional regulator
J5V93_RS13175	COG0287	Prephenate dehydrogenase
J5V93_RS13190	COG1605	Chorismate mutase
J5V93_RS13190	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
J5V93_RS13235	COG1388	LysM domain
J5V93_RS13235	COG3584	3D domain protein
J5V93_RS13245	COG0346	lactoylglutathione lyase activity
J5V93_RS13255	COG0431	NADPH-dependent FMN reductase
J5V93_RS13280	COG0579	oxidoreductase
J5V93_RS13285	COG1879	ABC-type sugar transport system periplasmic component
J5V93_RS13300	COG1129	ABC transporter
J5V93_RS13305	COG2390	Transcriptional regulator
J5V93_RS13325	COG2226	methyltransferase
J5V93_RS13345	COG2329	Antibiotic biosynthesis monooxygenase
J5V93_RS13375	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V93_RS13380	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
J5V93_RS13385	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
J5V93_RS13390	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V93_RS13395	COG3239	Fatty acid desaturase
J5V93_RS13420	COG3842	ATPase activity
J5V93_RS13445	COG1175	transmembrane transport
J5V93_RS13450	COG1349	DNA-binding transcription factor activity
J5V93_RS13460	COG3655	Transcriptional regulator
J5V93_RS13475	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V93_RS13480	COG0346	lactoylglutathione lyase activity
J5V93_RS13505	COG0714	Associated with various cellular activities
J5V93_RS13525	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
J5V93_RS13530	COG0753	catalase activity
J5V93_RS13540	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
J5V93_RS13565	COG0714	Associated with various cellular activities
J5V93_RS13575	COG0778	Nitroreductase
J5V93_RS13580	COG1846	Transcriptional regulator
J5V93_RS13715	COG0740	serine-type endopeptidase activity
J5V93_RS13725	COG4626	Terminase
J5V93_RS13725	COG1802	Transcriptional regulator
J5V93_RS13760	COG0582	viral genome integration into host DNA
J5V93_RS13810	COG2002	toxin-antitoxin pair type II binding
J5V93_RS13820	COG1484	DNA-dependent DNA replication
J5V93_RS13850	COG1396	sequence-specific DNA binding
J5V93_RS13875	COG0582	viral genome integration into host DNA
J5V93_RS13885	COG3831	ATPase activity
J5V93_RS13885	COG4884	unkown
J5V93_RS13905	COG2207	Transcriptional regulator
J5V93_RS13910	COG0456	acetyltransferase
J5V93_RS13925	COG0697	spore germination
J5V93_RS13930	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V93_RS13955	COG0814	amino acid
J5V93_RS13960	COG0697	spore germination
J5V93_RS13975	COG0642	Histidine kinase
J5V93_RS13980	COG0745	RESPONSE REGULATOR receiver
J5V93_RS13985	COG0596	Alpha beta hydrolase
J5V93_RS13995	COG0456	acetyltransferase
J5V93_RS13995	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V93_RS14020	COG0730	response to heat
J5V93_RS14030	COG0833	amino acid
J5V93_RS14040	COG4335	DNA alkylation repair
J5V93_RS14065	COG0681	Belongs to the peptidase S26 family
J5V93_RS14070	COG0768	penicillin binding
J5V93_RS14085	COG3104	oligopeptide transport
J5V93_RS14090	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
J5V93_RS14105	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
J5V93_RS14110	COG1984	allophanate hydrolase subunit 2
J5V93_RS14115	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
J5V93_RS14120	COG1414	Transcriptional regulator
J5V93_RS14135	COG1960	acyl-CoA dehydrogenase activity
J5V93_RS14160	COG0640	Transcriptional regulator
J5V93_RS14170	COG3314	Sporulation integral membrane protein YlbJ
J5V93_RS14190	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
J5V93_RS14195	COG0577	efflux transmembrane transporter activity
J5V93_RS14200	COG0577	efflux transmembrane transporter activity
J5V93_RS14205	COG1136	(ABC) transporter
J5V93_RS14240	COG0574	Belongs to the PEP-utilizing enzyme family
J5V93_RS14240	COG3848	Pyruvate phosphate dikinase
J5V93_RS14250	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J5V93_RS14270	COG0697	spore germination
J5V93_RS14295	COG1288	antiporter activity
J5V93_RS14310	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS14310	COG3347	Dehydrogenase
J5V93_RS14320	COG1070	Carbohydrate kinase
J5V93_RS14325	COG0235	Class ii aldolase
J5V93_RS14335	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5V93_RS14345	COG4154	Belongs to the RbsD FucU family
J5V93_RS14360	COG0798	PFAM Bile acid sodium symporter
J5V93_RS14365	COG0346	lactoylglutathione lyase activity
J5V93_RS14370	COG0640	Transcriptional regulator
J5V93_RS14385	COG1309	transcriptional regulator
J5V93_RS14395	COG1522	sequence-specific DNA binding
J5V93_RS14415	COG0346	lactoylglutathione lyase activity
J5V93_RS14440	COG0745	RESPONSE REGULATOR receiver
J5V93_RS14445	COG5002	protein histidine kinase activity
J5V93_RS14445	COG3850	Histidine kinase
J5V93_RS14475	COG1073	alpha beta
J5V93_RS14480	COG0814	amino acid
J5V93_RS14490	COG1760	l-serine dehydratase
J5V93_RS14500	COG5002	protein histidine kinase activity
J5V93_RS14505	COG0745	RESPONSE REGULATOR receiver
J5V93_RS14515	COG5002	protein histidine kinase activity
J5V93_RS14540	COG4977	sequence-specific DNA binding
J5V93_RS14580	COG2814	Major facilitator Superfamily
J5V93_RS14595	COG2515	1-aminocyclopropane-1-carboxylate deaminase
J5V93_RS14605	COG2309	aminopeptidase activity
J5V93_RS14615	COG1690	Belongs to the RtcB family
J5V93_RS14640	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
J5V93_RS14660	COG1136	(ABC) transporter
J5V93_RS14665	COG0577	efflux transmembrane transporter activity
J5V93_RS14685	COG3850	Histidine kinase
J5V93_RS14685	COG5002	protein histidine kinase activity
J5V93_RS14695	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V93_RS14710	COG1619	proteins homologs of microcin C7 resistance protein MccF
J5V93_RS14730	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
J5V93_RS14765	COG2814	Major facilitator Superfamily
J5V93_RS14800	COG2849	repeat protein
J5V93_RS14805	COG5444	nuclease activity
J5V93_RS14815	COG5444	nuclease activity
J5V93_RS14915	COG0477	Major facilitator Superfamily
J5V93_RS14930	COG1846	Transcriptional regulator
J5V93_RS14935	COG2814	Major facilitator Superfamily
J5V93_RS14955	COG2211	Major facilitator Superfamily
J5V93_RS14985	COG0640	Transcriptional regulator
J5V93_RS15010	COG1329	Transcriptional regulator
J5V93_RS15065	COG5002	protein histidine kinase activity
J5V93_RS15080	COG1136	(ABC) transporter
J5V93_RS15095	COG1131	(ABC) transporter
J5V93_RS15205	COG4187	Peptidase family M20/M25/M40
J5V93_RS15220	COG2031	fatty acid transporter
J5V93_RS15230	COG2249	NAD(P)H dehydrogenase (quinone) activity
J5V93_RS15280	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
J5V93_RS15285	COG1288	antiporter activity
J5V93_RS15290	COG2356	endonuclease I
J5V93_RS15295	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V93_RS15300	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
J5V93_RS15330	COG1785	Belongs to the alkaline phosphatase family
J5V93_RS15335	COG0778	Nitroreductase
J5V93_RS15340	COG1733	regulation of RNA biosynthetic process
J5V93_RS15355	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS15365	COG1131	(ABC) transporter
J5V93_RS15395	COG1595	DNA-templated transcription, initiation
J5V93_RS15410	COG1011	Hydrolase
J5V93_RS15415	COG2365	Tyrosine phosphatase family
J5V93_RS15440	COG0346	lactoylglutathione lyase activity
J5V93_RS15445	COG1940	carbohydrate kinase activity
J5V93_RS15450	COG0738	Major facilitator superfamily
J5V93_RS15455	COG0110	maltose O-acetyltransferase activity
J5V93_RS15470	COG0628	permease
J5V93_RS15475	COG2261	transglycosylase associated protein
J5V93_RS15510	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
J5V93_RS15520	COG1253	flavin adenine dinucleotide binding
J5V93_RS15525	COG0789	Transcriptional regulator
J5V93_RS15535	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
J5V93_RS15560	COG0697	spore germination
J5V93_RS15565	COG1357	PFAM Pentapeptide repeats (8 copies)
J5V93_RS15570	COG3813	Protein conserved in bacteria
J5V93_RS15575	COG2706	6-phosphogluconolactonase activity
J5V93_RS15580	COG1070	Carbohydrate kinase
J5V93_RS15590	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
J5V93_RS15595	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
J5V93_RS15610	COG0814	amino acid
J5V93_RS15630	COG1393	Belongs to the ArsC family
J5V93_RS15640	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V93_RS15655	COG0494	nUDIX hydrolase
J5V93_RS15670	COG0384	phenazine biosynthesis protein PhzF
J5V93_RS15680	COG0318	PFAM AMP-dependent synthetase and ligase
J5V93_RS15685	COG2249	NAD(P)H dehydrogenase (quinone) activity
J5V93_RS15690	COG1733	regulation of RNA biosynthetic process
J5V93_RS15705	COG1191	sigma factor activity
J5V93_RS15720	COG1876	peptidase activity
J5V93_RS15765	COG0741	lytic transglycosylase activity
J5V93_RS15790	COG5002	protein histidine kinase activity
J5V93_RS15830	COG0814	amino acid
J5V93_RS15855	COG1151	hydroxylamine reductase activity
J5V93_RS15880	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V93_RS15890	COG2072	flavoprotein involved in K transport
J5V93_RS15935	COG1695	Transcriptional regulator
J5V93_RS15940	COG0604	alcohol dehydrogenase
J5V93_RS15945	COG1113	amino acid transport
J5V93_RS15955	COG2814	Major facilitator Superfamily
J5V93_RS15965	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V93_RS15970	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS15980	COG0534	Mate efflux family protein
J5V93_RS15985	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS15990	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V93_RS16005	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V93_RS16010	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J5V93_RS16030	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V93_RS16035	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V93_RS16040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V93_RS16045	COG3739	integral membrane protein
J5V93_RS16065	COG0583	DNA-binding transcription factor activity
J5V93_RS16090	COG1193	negative regulation of DNA recombination
J5V93_RS16110	COG2162	N-hydroxyarylamine O-acetyltransferase activity
J5V93_RS16115	COG1164	Oligoendopeptidase f
J5V93_RS16140	COG3781	membrane
J5V93_RS16155	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V93_RS16190	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
J5V93_RS16195	COG0640	Transcriptional regulator
J5V93_RS16200	COG0604	alcohol dehydrogenase
J5V93_RS16205	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
J5V93_RS16210	COG0457	Tetratricopeptide repeat
J5V93_RS16220	COG2808	Putative FMN-binding domain
J5V93_RS16225	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V93_RS16235	COG0277	FAD linked oxidase domain protein
J5V93_RS16255	COG1285	pathogenesis
J5V93_RS16265	COG2514	catechol 2,3-dioxygenase activity
J5V93_RS16270	COG2720	vancomycin resistance protein
J5V93_RS16295	COG1278	Cold shock
J5V93_RS16305	COG0716	FMN binding
J5V93_RS16315	COG0494	nUDIX hydrolase
J5V93_RS16335	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS16345	COG0165	Argininosuccinate lyase
J5V93_RS16360	COG4145	pantothenate transmembrane transporter activity
J5V93_RS16370	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS16375	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS16385	COG1657	PFAM Prenyltransferase squalene oxidase
J5V93_RS16390	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
J5V93_RS16395	COG2962	Rard protein
J5V93_RS16400	COG3326	Membrane
J5V93_RS16405	COG0531	amino acid
J5V93_RS16440	COG2226	methyltransferase
J5V93_RS16445	COG4166	transmembrane transport
J5V93_RS16450	COG4166	transmembrane transport
J5V93_RS16455	COG4166	transmembrane transport
J5V93_RS16460	COG1316	TRANSCRIPTIONal
J5V93_RS16470	COG1595	DNA-templated transcription, initiation
J5V93_RS16480	COG1131	(ABC) transporter
J5V93_RS16500	COG0673	inositol 2-dehydrogenase activity
J5V93_RS16505	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J5V93_RS16510	COG0187	DNA topoisomerase II activity
J5V93_RS16515	COG1832	CoA-binding protein
J5V93_RS16520	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J5V93_RS16525	COG0745	RESPONSE REGULATOR receiver
J5V93_RS16535	COG1328	CTP reductase activity
J5V93_RS16545	COG4841	protein insertion into membrane
J5V93_RS16550	COG0824	Thioesterase
J5V93_RS16575	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V93_RS16590	COG1132	(ABC) transporter
J5V93_RS16595	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
J5V93_RS16625	COG2211	Major facilitator Superfamily
J5V93_RS16635	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
J5V93_RS16650	COG0183	Belongs to the thiolase family
J5V93_RS16655	COG0318	PFAM AMP-dependent synthetase and ligase
J5V93_RS16660	COG1268	BioY protein
J5V93_RS16665	COG0318	PFAM AMP-dependent synthetase and ligase
J5V93_RS16670	COG1396	sequence-specific DNA binding
J5V93_RS16715	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V93_RS16725	COG5002	protein histidine kinase activity
J5V93_RS16735	COG0400	carboxylic ester hydrolase activity
J5V93_RS16740	COG0346	lactoylglutathione lyase activity
J5V93_RS16745	COG0069	glutamate synthase activity
J5V93_RS16750	COG1902	pentaerythritol trinitrate reductase activity
J5V93_RS16760	COG1329	Transcriptional regulator
J5V93_RS16765	COG0010	Belongs to the arginase family
J5V93_RS16775	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
J5V93_RS16780	COG2986	histidine ammonia-lyase
J5V93_RS16790	COG2226	methyltransferase
J5V93_RS16815	COG4846	Membrane protein involved in cytochrome C biogenesis
J5V93_RS16820	COG0785	Cytochrome C biogenesis protein
J5V93_RS16830	COG1473	amidohydrolase
J5V93_RS16835	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J5V93_RS16840	COG1131	(ABC) transporter
J5V93_RS16850	COG0583	DNA-binding transcription factor activity
J5V93_RS16860	COG1346	cytolysis
J5V93_RS16875	COG0730	response to heat
J5V93_RS16885	COG5632	N-Acetylmuramoyl-L-alanine amidase
J5V93_RS16885	COG3409	Peptidoglycan-binding domain 1 protein
J5V93_RS16905	COG1132	(ABC) transporter
J5V93_RS16910	COG1132	(ABC) transporter
J5V93_RS16915	COG3763	UPF0154 protein
J5V93_RS16935	COG3639	organic phosphonate transmembrane transporter activity
J5V93_RS16945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V93_RS16950	COG0737	Belongs to the 5'-nucleotidase family
J5V93_RS16960	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
J5V93_RS16965	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
J5V93_RS16980	COG1695	Transcriptional regulator
J5V93_RS16985	COG1132	(ABC) transporter
J5V93_RS17015	COG0367	asparagine synthase
J5V93_RS17020	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J5V93_RS17030	COG1181	Belongs to the D-alanine--D-alanine ligase family
J5V93_RS17035	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
J5V93_RS17040	COG5434	Belongs to the glycosyl hydrolase 28 family
J5V93_RS17040	COG3420	alginic acid biosynthetic process
J5V93_RS17065	COG0438	transferase activity, transferring glycosyl groups
J5V93_RS17075	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
J5V93_RS17075	COG0463	Glycosyl transferase, family 2
J5V93_RS17080	COG0438	transferase activity, transferring glycosyl groups
J5V93_RS17085	COG0438	transferase activity, transferring glycosyl groups
J5V93_RS17090	COG1086	Polysaccharide biosynthesis protein
J5V93_RS17095	COG0489	protein tyrosine kinase activity
J5V93_RS17100	COG3944	biosynthesis protein
J5V93_RS17105	COG0174	glutamine synthetase
J5V93_RS17110	COG0789	Transcriptional regulator
J5V93_RS17115	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
J5V93_RS17120	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
J5V93_RS17125	COG2860	membrane
J5V93_RS17135	COG0464	growth
J5V93_RS17160	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
J5V93_RS17170	COG1388	LysM domain
J5V93_RS17170	COG3584	3D domain protein
J5V93_RS17175	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V93_RS17175	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J5V93_RS17175	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J5V93_RS17180	COG1105	Belongs to the carbohydrate kinase PfkB family
J5V93_RS17185	COG1349	DNA-binding transcription factor activity
J5V93_RS17190	COG1979	alcohol dehydrogenase
J5V93_RS17195	COG2322	membrane
J5V93_RS17205	COG1113	amino acid transport
J5V93_RS17215	COG1473	amidohydrolase
J5V93_RS17220	COG1408	metallophosphoesterase
J5V93_RS17225	COG2116	formate transmembrane transporter activity
J5V93_RS17240	COG2217	Heavy metal translocating P-type atpase
J5V93_RS17245	COG2608	mercury ion transmembrane transporter activity
J5V93_RS17250	COG1937	Protein conserved in bacteria
J5V93_RS17280	COG4566	intracellular signal transduction
J5V93_RS17290	COG2819	hydrolase of the alpha beta superfamily
J5V93_RS17295	COG1120	ATPase activity
J5V93_RS17300	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V93_RS17305	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V93_RS17310	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V93_RS17315	COG0708	Exodeoxyribonuclease III
J5V93_RS17320	COG2169	Transcriptional regulator
J5V93_RS17325	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
J5V93_RS17330	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
J5V93_RS17335	COG2706	6-phosphogluconolactonase activity
J5V93_RS17340	COG2195	Cleaves the N-terminal amino acid of tripeptides
J5V93_RS17345	COG2364	Membrane
J5V93_RS17355	COG0346	lactoylglutathione lyase activity
J5V93_RS17360	COG3300	MHYT domain
J5V93_RS17360	COG5001	Diguanylate cyclase
J5V93_RS17400	COG1346	cytolysis
J5V93_RS17410	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V93_RS17415	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V93_RS17415	COG0596	Alpha beta hydrolase
J5V93_RS17420	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V93_RS17430	COG2188	Transcriptional regulator
J5V93_RS17435	COG2723	6-phospho-beta-galactosidase activity
J5V93_RS17440	COG0823	Involved in the tonB-independent uptake of proteins
J5V93_RS17445	COG3773	Cell wall hydrolase
J5V93_RS17455	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J5V93_RS17465	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
J5V93_RS17470	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
J5V93_RS17475	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
J5V93_RS17485	COG4550	Control of competence regulator ComK, YlbF/YmcA
J5V93_RS17490	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J5V93_RS17495	COG1013	pyruvate-flavodoxin oxidoreductase activity
J5V93_RS17500	COG0674	pyruvate-flavodoxin oxidoreductase activity
J5V93_RS17500	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
J5V93_RS17510	COG2359	stage V sporulation protein S
J5V93_RS17515	COG1692	metallophosphoesterase
J5V93_RS17520	COG1418	mRNA catabolic process
J5V93_RS17525	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
J5V93_RS17530	COG1058	Belongs to the CinA family
J5V93_RS17530	COG1546	Belongs to the CinA family
J5V93_RS17535	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
J5V93_RS17540	COG1426	Protein conserved in bacteria
J5V93_RS17555	COG0300	oxidoreductase activity
J5V93_RS17560	COG0612	Peptidase, M16
J5V93_RS17565	COG0612	Peptidase, M16
J5V93_RS17570	COG1079	Belongs to the binding-protein-dependent transport system permease family
J5V93_RS17575	COG4603	Belongs to the binding-protein-dependent transport system permease family
J5V93_RS17580	COG3845	ABC transporter
J5V93_RS17585	COG1744	ABC transporter substrate-binding protein PnrA-like
J5V93_RS17590	COG2188	Transcriptional regulator
J5V93_RS17600	COG1674	ftsk spoiiie
J5V93_RS17610	COG0740	serine-type endopeptidase activity
J5V93_RS17615	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J5V93_RS17625	COG0527	aspartate kinase activity
J5V93_RS17630	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J5V93_RS17635	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
J5V93_RS17640	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J5V93_RS17645	COG1873	PFAM PRC-barrel domain
J5V93_RS17650	COG0612	Peptidase, M16
J5V93_RS17655	COG0726	polysaccharide deacetylase
J5V93_RS17660	COG1185	polyribonucleotide nucleotidyltransferase activity
J5V93_RS17670	COG0196	riboflavin kinase activity
J5V93_RS17680	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
J5V93_RS17685	COG1550	Protein conserved in bacteria
J5V93_RS17690	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
J5V93_RS17695	COG1358	cellular component organization or biogenesis
J5V93_RS17700	COG2740	Nucleic-acid-binding protein implicated in transcription termination
J5V93_RS17705	COG0195	Participates in both transcription termination and antitermination
J5V93_RS17710	COG0779	Required for maturation of 30S ribosomal subunits
J5V93_RS17720	COG0442	prolyl-tRNA aminoacylation
J5V93_RS17725	COG0750	zinc metalloprotease
J5V93_RS17735	COG4589	Belongs to the CDS family
J5V93_RS17745	COG0233	cytoplasmic translational termination
J5V93_RS17750	COG0528	UMP kinase activity
J5V93_RS17755	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
J5V93_RS17765	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
J5V93_RS17770	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
J5V93_RS17775	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
J5V93_RS17780	COG4974	Belongs to the 'phage' integrase family
J5V93_RS17785	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
J5V93_RS17790	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J5V93_RS17795	COG0758	DNA mediated transformation
J5V93_RS17800	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
J5V93_RS17805	COG0045	succinate-CoA ligase (ADP-forming) activity
J5V93_RS17810	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J5V93_RS17825	COG0335	large ribosomal subunit rRNA binding
J5V93_RS17830	COG0336	Belongs to the RNA methyltransferase TrmD family
J5V93_RS17835	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
J5V93_RS17840	COG1837	Belongs to the UPF0109 family
J5V93_RS17850	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
J5V93_RS17860	COG0552	protein localization to endoplasmic reticulum
J5V93_RS17865	COG1196	nuclear chromosome segregation
J5V93_RS17870	COG0571	ribonuclease III activity
J5V93_RS17875	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5V93_RS17880	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS17885	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
J5V93_RS17890	COG0416	fatty acid biosynthetic process
J5V93_RS17895	COG2050	protein possibly involved in aromatic compounds catabolism
J5V93_RS17895	COG1349	DNA-binding transcription factor activity
J5V93_RS17900	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
J5V93_RS17905	COG1461	Dihydroxyacetone kinase
J5V93_RS17910	COG1302	Protein conserved in bacteria
J5V93_RS17925	COG1564	THIamine pyrophosphokinase
J5V93_RS17930	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
J5V93_RS17940	COG0515	serine threonine protein kinase
J5V93_RS17940	COG2815	serine threonine protein kinase
J5V93_RS17945	COG0631	protein serine/threonine phosphatase activity
J5V93_RS17950	COG0820	rRNA (adenine-C2-)-methyltransferase activity
J5V93_RS17955	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J5V93_RS17955	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
J5V93_RS17960	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
J5V93_RS17965	COG0242	peptide deformylase activity
J5V93_RS17970	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
J5V93_RS17975	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
J5V93_RS17980	COG1758	RNA polymerase activity
J5V93_RS17995	COG1561	YicC-like family, N-terminal region
J5V93_RS18000	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
J5V93_RS18010	COG0006	proline dipeptidase activity
J5V93_RS18030	COG3069	C4-dicarboxylate transmembrane transporter activity
J5V93_RS18040	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
J5V93_RS18050	COG0167	dihydroorotate dehydrogenase activity
J5V93_RS18055	COG0543	2 iron, 2 sulfur cluster binding
J5V93_RS18060	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
J5V93_RS18070	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
J5V93_RS18075	COG0540	Belongs to the ATCase OTCase family
J5V93_RS18085	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
J5V93_RS18090	COG0564	pseudouridine synthase activity
J5V93_RS18095	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
J5V93_RS18105	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
J5V93_RS18110	COG3599	regulation of cell shape
J5V93_RS18115	COG2302	S4 RNA-binding domain
J5V93_RS18120	COG0762	integral membrane protein
J5V93_RS18125	COG1799	cell septum assembly
J5V93_RS18130	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
J5V93_RS18140	COG1873	PFAM PRC-barrel domain
J5V93_RS18145	COG1191	sigma factor activity
J5V93_RS18150	COG1191	sigma factor activity
J5V93_RS18160	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
J5V93_RS18165	COG0849	cell division
J5V93_RS18170	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
J5V93_RS18185	COG0772	Belongs to the SEDS family
J5V93_RS18190	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
J5V93_RS18195	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J5V93_RS18200	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
J5V93_RS18205	COG0768	penicillin binding
J5V93_RS18210	COG0768	penicillin binding
J5V93_RS18220	COG0275	rRNA processing
J5V93_RS18225	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
J5V93_RS18230	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
J5V93_RS18235	COG0454	-acetyltransferase
J5V93_RS18245	COG0333	Belongs to the bacterial ribosomal protein bL32 family
J5V93_RS18250	COG1399	metal-binding, possibly nucleic acid-binding protein
J5V93_RS18255	COG1323	Belongs to the UPF0348 family
J5V93_RS18260	COG3480	Lon protease (S16) C-terminal proteolytic domain
J5V93_RS18265	COG1752	Esterase of the alpha-beta hydrolase superfamily
J5V93_RS18270	COG3314	Sporulation integral membrane protein YlbJ
J5V93_RS18280	COG0742	ribosomal rna small subunit methyltransferase
J5V93_RS18290	COG4471	UPF0298 protein
J5V93_RS18295	COG3679	Belongs to the UPF0342 family
J5V93_RS18300	COG0406	alpha-ribazole phosphatase activity
J5V93_RS18315	COG2340	Cysteine-rich secretory protein family
J5V93_RS18325	COG3336	cytochrome c oxidase
J5V93_RS18350	COG0109	protoheme IX farnesyltransferase activity
J5V93_RS18355	COG1612	heme a metabolic process
J5V93_RS18360	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
J5V93_RS18365	COG0772	Belongs to the SEDS family
J5V93_RS18370	COG4838	Belongs to the UPF0358 family
J5V93_RS18375	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
J5V93_RS18380	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
J5V93_RS18390	COG4896	Protein conserved in bacteria
J5V93_RS18405	COG1217	gtp-binding protein TYPA
J5V93_RS18415	COG0483	inositol monophosphate 1-phosphatase activity
J5V93_RS18425	COG4493	Belongs to the UPF0637 family
J5V93_RS18430	COG4476	Belongs to the UPF0223 family
J5V93_RS18435	COG1982	Orn Lys Arg decarboxylase major
J5V93_RS18480	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V93_RS18485	COG0022	dehydrogenase e1 component
J5V93_RS18490	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J5V93_RS18505	COG0561	phosphatase activity
J5V93_RS18510	COG5503	Protein of unknown function (DUF1447)
J5V93_RS18515	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J5V93_RS18520	COG0569	domain protein
J5V93_RS18530	COG1473	amidohydrolase
J5V93_RS18535	COG2171	N-acyltransferase activity
J5V93_RS18540	COG0583	DNA-binding transcription factor activity
J5V93_RS18545	COG0517	IMP dehydrogenase activity
J5V93_RS18555	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
J5V93_RS18565	COG4703	Protein of unknown function (DUF1797)
J5V93_RS18580	COG2200	EAL domain
J5V93_RS18585	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS18590	COG1408	metallophosphoesterase
J5V93_RS18635	COG2814	Major facilitator Superfamily
J5V93_RS18645	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
J5V93_RS18655	COG3209	COG3209 Rhs family protein
J5V93_RS18665	COG2205	protein histidine kinase activity
J5V93_RS18675	COG0436	Aminotransferase
J5V93_RS18680	COG1609	Transcriptional regulator
J5V93_RS18685	COG3833	ABC-type maltose transport systems, permease component
J5V93_RS18690	COG1175	transmembrane transport
J5V93_RS18695	COG2182	Extracellular solute-binding protein
J5V93_RS18705	COG0366	Alpha amylase catalytic
J5V93_RS18710	COG3842	ATPase activity
J5V93_RS18750	COG0183	Belongs to the thiolase family
J5V93_RS18785	COG1695	Transcriptional regulator
J5V93_RS18790	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS18800	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
J5V93_RS18805	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
J5V93_RS18810	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
J5V93_RS18815	COG0436	Aminotransferase
J5V93_RS18820	COG1850	ribulose-bisphosphate carboxylase activity
J5V93_RS18825	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
J5V93_RS18830	COG0235	Class ii aldolase
J5V93_RS18835	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
J5V93_RS18850	COG2084	Dehydrogenase
J5V93_RS18860	COG2199	diguanylate cyclase activity
J5V93_RS18865	COG0778	Nitroreductase
J5V93_RS18890	COG1263	PTS System
J5V93_RS18890	COG2190	(PTS) system
J5V93_RS18890	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V93_RS18895	COG3711	transcriptional antiterminator
J5V93_RS18905	COG2188	Transcriptional regulator
J5V93_RS18910	COG0363	glucosamine-6-phosphate deaminase activity
J5V93_RS18915	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
J5V93_RS18925	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
J5V93_RS18930	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
J5V93_RS18940	COG1547	Domain of unknown function (DUF309)
J5V93_RS18950	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
J5V93_RS18955	COG4086	secreted protein
J5V93_RS18960	COG0561	phosphatase activity
J5V93_RS18965	COG0697	spore germination
J5V93_RS18980	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V93_RS19020	COG1686	Belongs to the peptidase S11 family
J5V93_RS19025	COG1725	Transcriptional regulator
J5V93_RS19030	COG1131	(ABC) transporter
J5V93_RS19055	COG1846	Transcriptional regulator
J5V93_RS19070	COG0598	Magnesium transport protein CorA
J5V93_RS19085	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
J5V93_RS19095	COG4974	Belongs to the 'phage' integrase family
J5V93_RS19105	COG0735	belongs to the Fur family
J5V93_RS19110	COG1300	Membrane
J5V93_RS19130	COG0667	Aldo Keto reductase
J5V93_RS19135	COG0656	L-ascorbic acid biosynthetic process
J5V93_RS19140	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V93_RS19140	COG0456	acetyltransferase
J5V93_RS19150	COG4085	toxin activity
J5V93_RS19150	COG1525	nuclease
J5V93_RS19150	COG0737	Belongs to the 5'-nucleotidase family
J5V93_RS19155	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
J5V93_RS19165	COG0596	Alpha beta hydrolase
J5V93_RS19170	COG2056	Na+-H+ antiporter family
J5V93_RS19175	COG1609	Transcriptional regulator
J5V93_RS19180	COG0456	acetyltransferase
J5V93_RS19185	COG1073	alpha beta
J5V93_RS19200	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J5V93_RS19200	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J5V93_RS19205	COG0307	riboflavin synthase, alpha
J5V93_RS19210	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J5V93_RS19210	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J5V93_RS19225	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
J5V93_RS19230	COG4106	trans-aconitate 2-methyltransferase activity
J5V93_RS19235	COG1073	alpha beta
J5V93_RS19235	COG2226	methyltransferase
J5V93_RS19240	COG0156	8-amino-7-oxononanoate synthase activity
J5V93_RS19250	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V93_RS19260	COG1757	Na H antiporter
J5V93_RS19265	COG0737	Belongs to the 5'-nucleotidase family
J5V93_RS19275	COG1522	sequence-specific DNA binding
J5V93_RS19310	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
J5V93_RS19320	COG0300	oxidoreductase activity
J5V93_RS19325	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V93_RS19330	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V93_RS19335	COG1760	l-serine dehydratase
J5V93_RS19340	COG1760	l-serine dehydratase
J5V93_RS19350	COG1234	tRNA 3'-trailer cleavage
J5V93_RS19365	COG1285	pathogenesis
J5V93_RS19380	COG2195	Cleaves the N-terminal amino acid of tripeptides
J5V93_RS19385	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V93_RS19400	COG1376	ErfK ybiS ycfS ynhG family protein
J5V93_RS19405	COG4129	membrane
J5V93_RS19410	COG1126	abc transporter atp-binding protein
J5V93_RS19415	COG0765	amino acid transport
J5V93_RS19420	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V93_RS19435	COG2816	NAD+ diphosphatase activity
J5V93_RS19440	COG2323	membrane
J5V93_RS19445	COG0772	Belongs to the SEDS family
J5V93_RS19450	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V93_RS19455	COG0022	dehydrogenase e1 component
J5V93_RS19460	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J5V93_RS19465	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J5V93_RS19470	COG3426	butyrate kinase activity
J5V93_RS19480	COG0280	phosphate acetyltransferase
J5V93_RS19485	COG3290	protein histidine kinase activity
J5V93_RS19485	COG3829	transcription factor binding
J5V93_RS19495	COG0584	glycerophosphoryl diester phosphodiesterase
J5V93_RS19500	COG3093	addiction module antidote protein HigA
J5V93_RS19510	COG0745	RESPONSE REGULATOR receiver
J5V93_RS19515	COG0750	zinc metalloprotease
J5V93_RS19520	COG0497	DNA recombination
J5V93_RS19525	COG1438	arginine binding
J5V93_RS19530	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
J5V93_RS19535	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
J5V93_RS19540	COG0142	geranyltranstransferase activity
J5V93_RS19545	COG1722	exodeoxyribonuclease VII activity
J5V93_RS19550	COG1570	exodeoxyribonuclease VII activity
J5V93_RS19555	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
J5V93_RS19560	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J5V93_RS19565	COG1302	Protein conserved in bacteria
J5V93_RS19570	COG0439	Biotin carboxylase
J5V93_RS19575	COG0511	ligase activity, forming carbon-carbon bonds
J5V93_RS19620	COG3854	ATPases associated with a variety of cellular activities
J5V93_RS19640	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
J5V93_RS19645	COG0006	proline dipeptidase activity
J5V93_RS19650	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
J5V93_RS19660	COG3872	metal-dependent enzyme
J5V93_RS19670	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J5V93_RS19705	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V93_RS19715	COG1609	Transcriptional regulator
J5V93_RS19725	COG2076	Multidrug Resistance protein
J5V93_RS19730	COG2076	Multidrug Resistance protein
J5V93_RS19770	COG1725	Transcriptional regulator
J5V93_RS19785	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J5V93_RS19790	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J5V93_RS19795	COG0404	The glycine cleavage system catalyzes the degradation of glycine
J5V93_RS19800	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5V93_RS19830	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
J5V93_RS19855	COG4970	Tfp pilus assembly protein FimT
J5V93_RS19865	COG1459	type II secretion system
J5V93_RS19870	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
J5V93_RS19925	COG0646	methionine synthase
J5V93_RS19925	COG1410	methionine synthase
J5V93_RS19930	COG0646	methionine synthase
J5V93_RS19930	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
J5V93_RS19935	COG0626	cystathionine gamma-synthase activity
J5V93_RS19940	COG0626	cystathionine gamma-synthase activity
J5V93_RS19960	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V93_RS19970	COG1940	carbohydrate kinase activity
J5V93_RS19975	COG4483	Protein conserved in bacteria
J5V93_RS19980	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
J5V93_RS19985	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J5V93_RS19990	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
J5V93_RS19995	COG0704	Plays a role in the regulation of phosphate uptake
J5V93_RS20005	COG0581	inorganic phosphate transmembrane transporter activity
J5V93_RS20010	COG0573	inorganic phosphate transmembrane transporter activity
J5V93_RS20015	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
J5V93_RS20020	COG0768	penicillin binding
J5V93_RS20025	COG0477	Major facilitator Superfamily
J5V93_RS20030	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J5V93_RS20050	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
J5V93_RS20055	COG0735	belongs to the Fur family
J5V93_RS20060	COG1108	ABC-type Mn2 Zn2 transport systems permease components
J5V93_RS20065	COG1121	(ABC) transporter
J5V93_RS20070	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V93_RS20080	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
J5V93_RS20095	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
J5V93_RS20100	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
J5V93_RS20105	COG2384	SAM-dependent methyltransferase
J5V93_RS20110	COG2010	Cytochrome c
J5V93_RS20115	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
J5V93_RS20120	COG0358	DNA primase activity
J5V93_RS20130	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
J5V93_RS20135	COG0517	IMP dehydrogenase activity
J5V93_RS20140	COG1381	Involved in DNA repair and RecF pathway recombination
J5V93_RS20150	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
J5V93_RS20155	COG0295	cytidine deaminase activity
J5V93_RS20160	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
J5V93_RS20165	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
J5V93_RS20170	COG1480	7TM receptor with intracellular HD hydrolase
J5V93_RS20175	COG1702	phosphate starvation-inducible protein PhoH
J5V93_RS20190	COG1610	YqeY-like protein
J5V93_RS20195	COG0828	Belongs to the bacterial ribosomal protein bS21 family
J5V93_RS20200	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J5V93_RS20205	COG1385	rRNA (uridine-N3-)-methyltransferase activity
J5V93_RS20215	COG0484	heat shock protein binding
J5V93_RS20225	COG0443	Heat shock 70 kDa protein
J5V93_RS20235	COG1420	regulation of RNA biosynthetic process
J5V93_RS20240	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J5V93_RS20245	COG1733	regulation of RNA biosynthetic process
J5V93_RS20250	COG0481	GTPase activity
J5V93_RS20260	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
J5V93_RS20265	COG0268	Binds directly to 16S ribosomal RNA
J5V93_RS20270	COG1466	dna polymerase III delta subunit
J5V93_RS20280	COG2333	competence protein COMEC
J5V93_RS20280	COG0658	competence protein
J5V93_RS20285	COG2131	deaminase
J5V93_RS20290	COG1555	photosystem II stabilization
J5V93_RS20290	COG1596	polysaccharide export
J5V93_RS20295	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V93_RS20300	COG2226	methyltransferase
J5V93_RS20305	COG0799	negative regulation of ribosome biogenesis
J5V93_RS20310	COG1713	HD superfamily hydrolase involved in NAD metabolism
J5V93_RS20315	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
J5V93_RS20320	COG1534	Rna-binding protein
J5V93_RS20325	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
J5V93_RS20330	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
J5V93_RS20335	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
J5V93_RS20345	COG0688	phosphatidylethanolamine metabolic process
J5V93_RS20355	COG1595	DNA-templated transcription, initiation
J5V93_RS20360	COG2357	RelA SpoT domain protein
J5V93_RS20370	COG1785	Belongs to the alkaline phosphatase family
J5V93_RS20380	COG2267	carboxylic ester hydrolase activity
J5V93_RS20415	COG1404	Belongs to the peptidase S8 family
J5V93_RS20420	COG3186	Phenylalanine-4-hydroxylase
J5V93_RS20425	COG2154	pterin-4-alpha-carbinolamine dehydratase
J5V93_RS20430	COG2514	catechol 2,3-dioxygenase activity
J5V93_RS20435	COG2259	Doxx family
J5V93_RS20475	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V93_RS20485	COG1454	alcohol dehydrogenase
J5V93_RS20485	COG1012	belongs to the aldehyde dehydrogenase family
J5V93_RS20490	COG0626	cystathionine gamma-synthase activity
J5V93_RS20495	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J5V93_RS20500	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V93_RS20505	COG2226	methyltransferase
J5V93_RS20520	COG0768	penicillin binding
J5V93_RS20525	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
J5V93_RS20530	COG0572	uridine kinase
J5V93_RS20535	COG0826	peptidase U32
J5V93_RS20540	COG0826	peptidase U32
J5V93_RS20545	COG4122	O-methyltransferase activity
J5V93_RS20550	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
J5V93_RS20560	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
J5V93_RS20565	COG4472	Bacterial protein of unknown function (DUF965)
J5V93_RS20570	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
J5V93_RS20580	COG0628	permease
J5V93_RS20600	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
J5V93_RS20610	COG0482	sulfurtransferase activity
J5V93_RS20615	COG1104	cysteine desulfurase activity
J5V93_RS20620	COG1959	2 iron, 2 sulfur cluster binding
J5V93_RS20625	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
J5V93_RS20635	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
J5V93_RS20640	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
J5V93_RS20655	COG1490	D-aminoacyl-tRNA deacylase activity
J5V93_RS20660	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
J5V93_RS20665	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J5V93_RS20670	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
J5V93_RS20670	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
J5V93_RS20675	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J5V93_RS20680	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J5V93_RS20680	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J5V93_RS20690	COG2244	polysaccharide biosynthetic process
J5V93_RS20695	COG2323	membrane
J5V93_RS20705	COG1862	Preprotein translocase
J5V93_RS20710	COG0343	queuine tRNA-ribosyltransferase activity
J5V93_RS20715	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
J5V93_RS20725	COG2255	four-way junction helicase activity
J5V93_RS20730	COG0632	four-way junction helicase activity
J5V93_RS20735	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
J5V93_RS20760	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
J5V93_RS20765	COG0157	Belongs to the NadC ModD family
J5V93_RS20770	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
J5V93_RS20775	COG1104	cysteine desulfurase activity
J5V93_RS20780	COG1827	regulation of RNA biosynthetic process
J5V93_RS20785	COG2258	MOSC domain
J5V93_RS20790	COG0077	Prephenate dehydratase
J5V93_RS20795	COG0577	efflux transmembrane transporter activity
J5V93_RS20800	COG0577	efflux transmembrane transporter activity
J5V93_RS20805	COG1136	(ABC) transporter
J5V93_RS20810	COG5002	protein histidine kinase activity
J5V93_RS20815	COG0745	RESPONSE REGULATOR receiver
J5V93_RS20820	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
J5V93_RS20825	COG3290	protein histidine kinase activity
J5V93_RS20835	COG2868	ribosomal protein
J5V93_RS20845	COG1530	ribonuclease E activity
J5V93_RS20850	COG1994	Peptidase M50
J5V93_RS20855	COG0739	heme binding
J5V93_RS20860	COG2894	cell division
J5V93_RS20865	COG0850	regulation of cytokinetic process
J5V93_RS20880	COG1077	Cell shape determining protein MreB Mrl
J5V93_RS20885	COG2003	Belongs to the UPF0758 family
J5V93_RS20890	COG0424	maF-like protein
J5V93_RS20900	COG0285	dihydrofolate synthase activity
J5V93_RS20915	COG1388	LysM domain
J5V93_RS20920	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J5V93_RS20925	COG0113	porphobilinogen synthase activity
J5V93_RS20930	COG1587	Uroporphyrinogen-III synthase
J5V93_RS20935	COG0181	hydroxymethylbilane synthase activity
J5V93_RS20940	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J5V93_RS20945	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
J5V93_RS20950	COG1846	Transcriptional regulator
J5V93_RS20955	COG1764	response to oxidative stress
J5V93_RS20960	COG0218	Necessary for normal cell division and for the maintenance of normal septation
J5V93_RS20970	COG1067	ATP-dependent peptidase activity
J5V93_RS20970	COG0470	DNA polymerase III
J5V93_RS20980	COG0544	peptidyl-prolyl cis-trans isomerase activity
J5V93_RS21010	COG0622	Phosphoesterase
J5V93_RS21020	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
J5V93_RS21025	COG5401	PFAM Sporulation and spore germination
J5V93_RS21035	COG0477	Major facilitator Superfamily
J5V93_RS21040	COG2197	response regulator
J5V93_RS21045	COG2233	PERMEase
J5V93_RS21050	COG0402	S-adenosylhomocysteine deaminase activity
J5V93_RS21055	COG1983	PspC domain protein
J5V93_RS21060	COG1396	sequence-specific DNA binding
J5V93_RS21065	COG0697	spore germination
J5V93_RS21075	COG1959	2 iron, 2 sulfur cluster binding
J5V93_RS21080	COG1668	transmembrane transport
J5V93_RS21085	COG4152	abc transporter atp-binding protein
J5V93_RS21090	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
J5V93_RS21095	COG1360	Flagellar Motor Protein
J5V93_RS21100	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
J5V93_RS21105	COG1876	peptidase activity
J5V93_RS21110	COG0824	Thioesterase
J5V93_RS21115	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
J5V93_RS21120	COG1053	succinate dehydrogenase
J5V93_RS21125	COG2009	succinate dehydrogenase
J5V93_RS21130	COG1719	4-vinyl reductase, 4VR
J5V93_RS21135	COG0322	excinuclease ABC activity
J5V93_RS21140	COG3118	belongs to the thioredoxin family
J5V93_RS21145	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
J5V93_RS21150	COG2086	electron transfer activity
J5V93_RS21155	COG1024	Enoyl-CoA hydratase
J5V93_RS21160	COG1309	transcriptional regulator
J5V93_RS21165	COG0318	PFAM AMP-dependent synthetase and ligase
J5V93_RS21190	COG2318	DinB family
J5V93_RS21215	COG1131	(ABC) transporter
J5V93_RS21220	COG2205	protein histidine kinase activity
J5V93_RS21225	COG0745	RESPONSE REGULATOR receiver
J5V93_RS21235	COG4895	conserved protein (DUF2196)
J5V93_RS21240	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
J5V93_RS21250	COG4509	Sortase family
J5V93_RS21255	COG1120	ATPase activity
J5V93_RS21270	COG5386	Cell surface protein
J5V93_RS21280	COG5386	Cell surface protein
J5V93_RS21285	COG1114	Component of the transport system for branched-chain amino acids
J5V93_RS21295	COG1193	negative regulation of DNA recombination
J5V93_RS21300	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
J5V93_RS21300	COG1796	DNA polymerase
J5V93_RS21305	COG1286	toxin biosynthetic process
J5V93_RS21310	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
J5V93_RS21315	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J5V93_RS21340	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
J5V93_RS21345	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J5V93_RS21355	COG1418	mRNA catabolic process
J5V93_RS21385	COG2814	Major facilitator Superfamily
J5V93_RS21390	COG1566	PFAM secretion protein HlyD family protein
J5V93_RS21395	COG1309	transcriptional regulator
J5V93_RS21400	COG1363	Peptidase, m42
J5V93_RS21410	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
J5V93_RS21425	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J5V93_RS21435	COG1484	DNA-dependent DNA replication
J5V93_RS21440	COG3611	Membrane attachment protein
J5V93_RS21445	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
J5V93_RS21450	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
J5V93_RS21455	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J5V93_RS21460	COG0237	dephospho-CoA kinase activity
J5V93_RS21465	COG1971	Probably functions as a manganese efflux pump
J5V93_RS21475	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J5V93_RS21475	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J5V93_RS21480	COG5002	protein histidine kinase activity
J5V93_RS21485	COG0745	RESPONSE REGULATOR receiver
J5V93_RS21500	COG0039	L-malate dehydrogenase activity
J5V93_RS21505	COG0538	isocitrate dehydrogenase activity
J5V93_RS21510	COG0372	Belongs to the citrate synthase family
J5V93_RS21520	COG0628	permease
J5V93_RS21525	COG3030	protein affecting phage T7 exclusion by the F plasmid
J5V93_RS21535	COG0205	6-phosphofructokinase activity
J5V93_RS21545	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
J5V93_RS21550	COG1725	Transcriptional regulator
J5V93_RS21555	COG0281	malic enzyme
J5V93_RS21560	COG0587	DNA-directed DNA polymerase activity
J5V93_RS21575	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
J5V93_RS21590	COG4109	DRTGG domain
J5V93_RS21605	COG0006	proline dipeptidase activity
J5V93_RS21635	COG0662	Cupin 2, conserved barrel domain protein
J5V93_RS21645	COG1476	TRANSCRIPTIONal
J5V93_RS21660	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS21665	COG0589	response to stress
J5V93_RS21695	COG0137	argininosuccinate synthase activity
J5V93_RS21710	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V93_RS21730	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
J5V93_RS21735	COG0827	DNA restriction-modification system
J5V93_RS21740	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
J5V93_RS21745	COG3874	Sporulation protein YtfJ
J5V93_RS21760	COG1574	metal-dependent hydrolase with the TIM-barrel fold
J5V93_RS21770	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J5V93_RS21785	COG1104	cysteine desulfurase activity
J5V93_RS21790	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
J5V93_RS21805	COG1309	transcriptional regulator
J5V93_RS21810	COG1956	GAF domain-containing protein
J5V93_RS21815	COG0626	cystathionine gamma-synthase activity
J5V93_RS21820	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
J5V93_RS21845	COG1595	DNA-templated transcription, initiation
J5V93_RS21855	COG0110	maltose O-acetyltransferase activity
J5V93_RS21860	COG0456	acetyltransferase
J5V93_RS21865	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J5V93_RS21870	COG0454	-acetyltransferase
J5V93_RS21875	COG0517	IMP dehydrogenase activity
J5V93_RS21880	COG0123	including yeast histone deacetylase and acetoin utilization protein
J5V93_RS21895	COG0745	RESPONSE REGULATOR receiver
J5V93_RS21900	COG5002	protein histidine kinase activity
J5V93_RS21915	COG1970	mechanosensitive ion channel activity
J5V93_RS21935	COG1609	Transcriptional regulator
J5V93_RS21950	COG4851	CamS sex pheromone cAM373 precursor
J5V93_RS21955	COG3118	belongs to the thioredoxin family
J5V93_RS21965	COG2309	aminopeptidase activity
J5V93_RS21995	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
J5V93_RS22005	COG1674	ftsk spoiiie
J5V93_RS22020	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5V93_RS22025	COG4848	Belongs to the UPF0354 family
J5V93_RS22030	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V93_RS22035	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
J5V93_RS22040	COG1363	Peptidase, m42
J5V93_RS22050	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V93_RS22055	COG0220	tRNA (guanine-N7-)-methyltransferase activity
J5V93_RS22065	COG0510	thiamine kinase activity
J5V93_RS22070	COG1523	belongs to the glycosyl hydrolase 13 family
J5V93_RS22080	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5V93_RS22085	COG1349	DNA-binding transcription factor activity
J5V93_RS22090	COG1187	pseudouridine synthase activity
J5V93_RS22095	COG2244	polysaccharide biosynthetic process
J5V93_RS22100	COG2081	HI0933 family
J5V93_RS22105	COG2814	Major facilitator Superfamily
J5V93_RS22115	COG3832	glyoxalase III activity
J5V93_RS22135	COG1329	Transcriptional regulator
J5V93_RS22160	COG0314	molybdopterin synthase activity
J5V93_RS22165	COG1763	Mo-molybdopterin cofactor biosynthetic process
J5V93_RS22170	COG0303	'Molybdopterin
J5V93_RS22175	COG0315	cyclic pyranopterin monophosphate synthase activity
J5V93_RS22180	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V93_RS22185	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
J5V93_RS22205	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V93_RS22215	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
J5V93_RS22255	COG0495	leucyl-tRNA aminoacylation
J5V93_RS22260	COG2814	Major facilitator Superfamily
J5V93_RS22265	COG0475	glutathione-regulated potassium exporter activity
J5V93_RS22270	COG0490	domain, Protein
J5V93_RS22275	COG0582	viral genome integration into host DNA
J5V93_RS22285	COG1136	(ABC) transporter
J5V93_RS22300	COG1242	4 iron, 4 sulfur cluster binding
J5V93_RS22305	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
J5V93_RS22310	COG1131	(ABC) transporter
J5V93_RS22320	COG1794	racemase activity, acting on amino acids and derivatives
J5V93_RS22335	COG2267	carboxylic ester hydrolase activity
J5V93_RS22340	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
J5V93_RS22345	COG0671	phosphoesterase, PA-phosphatase related
J5V93_RS22350	COG0438	transferase activity, transferring glycosyl groups
J5V93_RS22360	COG0521	Mo-molybdopterin cofactor biosynthetic process
J5V93_RS22385	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
J5V93_RS22390	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
J5V93_RS22430	COG5002	protein histidine kinase activity
J5V93_RS22435	COG3852	Histidine kinase
J5V93_RS22440	COG0753	catalase activity
J5V93_RS22445	COG2267	carboxylic ester hydrolase activity
J5V93_RS22455	COG1368	sulfuric ester hydrolase activity
J5V93_RS22465	COG4895	conserved protein (DUF2196)
J5V93_RS22480	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J5V93_RS22485	COG1116	anion transmembrane transporter activity
J5V93_RS22490	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J5V93_RS22515	COG0494	nUDIX hydrolase
J5V93_RS22550	COG2076	Multidrug Resistance protein
J5V93_RS22560	COG0789	Transcriptional regulator
J5V93_RS22565	COG1854	S-ribosylhomocysteine lyase activity
J5V93_RS22575	COG0288	reversible hydration of carbon dioxide
J5V93_RS22580	COG1271	oxidase subunit
J5V93_RS22585	COG1294	oxidase, subunit
J5V93_RS22605	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V93_RS22630	COG1842	Phage shock protein A
J5V93_RS22655	COG3859	Proton-coupled thiamine transporter YuaJ
J5V93_RS22660	COG5002	protein histidine kinase activity
J5V93_RS22665	COG0745	RESPONSE REGULATOR receiver
J5V93_RS22690	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
J5V93_RS22695	COG1597	lipid kinase activity
J5V93_RS22725	COG1136	(ABC) transporter
J5V93_RS22755	COG5002	protein histidine kinase activity
J5V93_RS22765	COG0586	Pfam SNARE associated Golgi protein
J5V93_RS22780	COG0577	efflux transmembrane transporter activity
J5V93_RS22785	COG1136	(ABC) transporter
J5V93_RS22790	COG2207	Transcriptional regulator
J5V93_RS22790	COG3708	Transcriptional regulator
J5V93_RS22800	COG1131	(ABC) transporter
J5V93_RS22810	COG5658	integral membrane protein
J5V93_RS22815	COG0640	Transcriptional regulator
J5V93_RS22820	COG0745	RESPONSE REGULATOR receiver
J5V93_RS22825	COG2205	protein histidine kinase activity
J5V93_RS22830	COG0577	efflux transmembrane transporter activity
J5V93_RS22835	COG0577	efflux transmembrane transporter activity
J5V93_RS22840	COG1136	(ABC) transporter
J5V93_RS22845	COG0577	efflux transmembrane transporter activity
J5V93_RS22860	COG2188	Transcriptional regulator
J5V93_RS22880	COG3964	amidohydrolase
J5V93_RS22900	COG4948	Mandelate Racemase Muconate Lactonizing
J5V93_RS22905	COG0318	PFAM AMP-dependent synthetase and ligase
J5V93_RS22910	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
J5V93_RS22920	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
J5V93_RS22925	COG1169	isochorismate synthase
J5V93_RS22930	COG1575	Belongs to the MenA family. Type 1 subfamily
J5V93_RS22935	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
J5V93_RS22940	COG1278	Cold shock
J5V93_RS22950	COG0789	Transcriptional regulator
J5V93_RS22960	COG0058	SHG alpha-glucan phosphorylase activity
J5V93_RS22970	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
J5V93_RS22975	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
J5V93_RS22980	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
J5V93_RS23005	COG1595	DNA-templated transcription, initiation
J5V93_RS23140	COG1285	pathogenesis
J5V93_RS23145	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
J5V93_RS23155	COG0166	Belongs to the GPI family
J5V93_RS23160	COG2155	Conserved Protein
J5V93_RS23165	COG1098	S1 RNA binding domain
J5V93_RS23170	COG0436	Aminotransferase
J5V93_RS23175	COG1522	sequence-specific DNA binding
J5V93_RS23180	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J5V93_RS23185	COG2267	carboxylic ester hydrolase activity
J5V93_RS23195	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
J5V93_RS23215	COG5018	Exonuclease
J5V93_RS23220	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J5V93_RS23240	COG2050	protein possibly involved in aromatic compounds catabolism
J5V93_RS23250	COG1268	BioY protein
J5V93_RS23260	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J5V93_RS23265	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J5V93_RS23275	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
J5V93_RS23280	COG3584	3D domain protein
J5V93_RS23295	COG1252	NADH dehydrogenase
J5V93_RS23300	COG0492	ferredoxin-NADP+ reductase activity
J5V93_RS23305	COG3708	Transcriptional regulator
J5V93_RS23320	COG1683	Conserved Protein
J5V93_RS23340	COG0316	Belongs to the HesB IscA family
J5V93_RS23345	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
J5V93_RS23350	COG4844	belongs to the
J5V93_RS23355	COG1252	NADH dehydrogenase
J5V93_RS23365	COG0390	transport system, permease component
J5V93_RS23370	COG2824	Alkylphosphonate utilization operon protein PhnA
J5V93_RS23400	COG4837	Protein of unknown function (DUF1462)
J5V93_RS23405	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
J5V93_RS23415	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J5V93_RS23420	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
J5V93_RS23435	COG0577	efflux transmembrane transporter activity
J5V93_RS23435	COG1136	(ABC) transporter
J5V93_RS23440	COG2249	NAD(P)H dehydrogenase (quinone) activity
J5V93_RS23450	COG0647	UMP catabolic process
J5V93_RS23460	COG2445	Protein of unknown function DUF86
J5V93_RS23465	COG1494	fructose-1,6-bisphosphatase
J5V93_RS23480	COG4470	Protein conserved in bacteria
J5V93_RS23490	COG0789	Transcriptional regulator
J5V93_RS23495	COG4377	Putative membrane peptidase family (DUF2324)
J5V93_RS23515	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
J5V93_RS23520	COG0739	heme binding
J5V93_RS23530	COG3377	Domain of unknown function (DUF1805)
J5V93_RS23535	COG0737	Belongs to the 5'-nucleotidase family
J5V93_RS23540	COG1695	Transcriptional regulator
J5V93_RS23550	COG0719	Fe-S assembly protein
J5V93_RS23555	COG0822	iron-sulfur transferase activity
J5V93_RS23560	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
J5V93_RS23565	COG0719	Fe-S assembly protein
J5V93_RS23570	COG0396	ATPase activity
J5V93_RS23575	COG1464	Belongs to the NlpA lipoprotein family
J5V93_RS23580	COG1464	Belongs to the NlpA lipoprotein family
J5V93_RS23585	COG2011	ABC-type metal ion transport system permease component
J5V93_RS23590	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
J5V93_RS23600	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V93_RS23605	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
J5V93_RS23615	COG0509	glycine decarboxylation via glycine cleavage system
J5V93_RS23620	COG1393	Belongs to the ArsC family
J5V93_RS23655	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V93_RS23660	COG1960	acyl-CoA dehydrogenase activity
J5V93_RS23665	COG0183	Belongs to the thiolase family
J5V93_RS23670	COG1024	Enoyl-CoA hydratase
J5V93_RS23670	COG1250	3-hydroxyacyl-CoA dehydrogenase
J5V93_RS23680	COG1686	Belongs to the peptidase S11 family
J5V93_RS23685	COG0506	proline dehydrogenase activity
J5V93_RS23695	COG0011	TIGRFAM Protein of
J5V93_RS23700	COG0840	transmembrane signaling receptor activity
J5V93_RS23715	COG2814	Major facilitator Superfamily
J5V93_RS23720	COG0531	amino acid
J5V93_RS23745	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V93_RS23785	COG0586	Pfam SNARE associated Golgi protein
J5V93_RS23795	COG1376	ErfK ybiS ycfS ynhG family protein
J5V93_RS23800	COG0745	RESPONSE REGULATOR receiver
J5V93_RS23805	COG5002	protein histidine kinase activity
J5V93_RS23815	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5V93_RS23830	COG0840	transmembrane signaling receptor activity
J5V93_RS23835	COG2151	metal-sulfur cluster biosynthetic enzyme
J5V93_RS23840	COG3227	Zinc metalloprotease (Elastase)
J5V93_RS23845	COG1741	Belongs to the pirin family
J5V93_RS23860	COG0586	Pfam SNARE associated Golgi protein
J5V93_RS23865	COG0475	glutathione-regulated potassium exporter activity
J5V93_RS23870	COG0490	domain, Protein
J5V93_RS23875	COG1115	amino acid carrier protein
J5V93_RS23880	COG0783	Belongs to the Dps family
J5V93_RS23890	COG2318	DinB family
J5V93_RS23895	COG1611	Belongs to the LOG family
J5V93_RS23905	COG1528	Iron-storage protein
J5V93_RS23910	COG2311	Membrane
J5V93_RS23915	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V93_RS23920	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V93_RS23925	COG1115	amino acid carrier protein
J5V93_RS23930	COG2910	NAD(P)H-binding
J5V93_RS23945	COG0656	L-ascorbic acid biosynthetic process
J5V93_RS23950	COG2814	Major facilitator Superfamily
J5V93_RS23955	COG1733	regulation of RNA biosynthetic process
J5V93_RS23965	COG1252	NADH dehydrogenase
J5V93_RS23985	COG3290	protein histidine kinase activity
J5V93_RS23985	COG0840	transmembrane signaling receptor activity
J5V93_RS23995	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
J5V93_RS24015	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V93_RS24030	COG4224	UPF0291 protein
J5V93_RS24035	COG1335	isochorismatase
J5V93_RS24040	COG1522	sequence-specific DNA binding
J5V93_RS24050	COG1522	sequence-specific DNA binding
J5V93_RS24055	COG0288	reversible hydration of carbon dioxide
J5V93_RS24060	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
J5V93_RS24065	COG2233	PERMEase
J5V93_RS24105	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
J5V93_RS24110	COG0557	exoribonuclease II activity
J5V93_RS24115	COG1647	Serine aminopeptidase, S33
J5V93_RS24120	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J5V93_RS24125	COG1346	cytolysis
J5V93_RS24140	COG0148	phosphopyruvate hydratase activity
J5V93_RS24150	COG0149	triose-phosphate isomerase activity
J5V93_RS24155	COG0126	phosphoglycerate kinase activity
J5V93_RS24160	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J5V93_RS24175	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
J5V93_RS24210	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V93_RS24225	COG2323	membrane
J5V93_RS24235	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V93_RS24240	COG1481	regulation of sporulation
J5V93_RS24245	COG0391	Required for morphogenesis under gluconeogenic growth conditions
J5V93_RS24250	COG1660	Displays ATPase and GTPase activities
J5V93_RS24255	COG1051	belongs to the nudix hydrolase family
J5V93_RS24265	COG0492	ferredoxin-NADP+ reductase activity
J5V93_RS24270	COG0457	Tetratricopeptide repeat
J5V93_RS24275	COG0110	maltose O-acetyltransferase activity
J5V93_RS24280	COG0546	phosphoglycolate phosphatase activity
J5V93_RS24285	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
J5V93_RS24290	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
J5V93_RS24295	COG1950	PFAM Membrane protein of
J5V93_RS24300	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
J5V93_RS24320	COG0789	Transcriptional regulator
J5V93_RS24355	COG0583	DNA-binding transcription factor activity
J5V93_RS24360	COG0789	Transcriptional regulator
J5V93_RS24365	COG0655	NAD(P)H dehydrogenase (quinone) activity
J5V93_RS24370	COG0488	(ABC) transporter
J5V93_RS24380	COG1132	(ABC) transporter
J5V93_RS24385	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J5V93_RS24390	COG0793	Belongs to the peptidase S41A family
J5V93_RS24390	COG3409	Peptidoglycan-binding domain 1 protein
J5V93_RS24395	COG2177	Part of the ABC transporter FtsEX involved in
J5V93_RS24400	COG2884	Cell division ATP-binding protein ftsE
J5V93_RS24425	COG1131	(ABC) transporter
J5V93_RS24460	COG1278	Cold shock
J5V93_RS24465	COG1040	competence protein
J5V93_RS24470	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
J5V93_RS24475	COG0791	NLP P60 protein
J5V93_RS24475	COG1388	LysM domain
J5V93_RS24480	COG1733	regulation of RNA biosynthetic process
J5V93_RS24485	COG1307	EDD domain protein, DegV family
J5V93_RS24490	COG1739	Uncharacterized protein family UPF0029
J5V93_RS24495	COG1316	TRANSCRIPTIONal
J5V93_RS24500	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
J5V93_RS24505	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
J5V93_RS24510	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J5V93_RS24520	COG3933	PFAM sigma-54 factor interaction domain-containing protein
J5V93_RS24520	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
J5V93_RS24540	COG1486	melibiose metabolic process
J5V93_RS24545	COG1447	Phosphotransferase system cellobiose-specific component IIA
J5V93_RS24550	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V93_RS24570	COG1447	Phosphotransferase system cellobiose-specific component IIA
J5V93_RS24580	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V93_RS24585	COG1301	dicarboxylic acid transport
J5V93_RS24600	COG1511	domain protein
J5V93_RS24605	COG0583	DNA-binding transcription factor activity
J5V93_RS24610	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
J5V93_RS24620	COG1271	oxidase subunit
J5V93_RS24625	COG1294	oxidase, subunit
J5V93_RS24630	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J5V93_RS24635	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
J5V93_RS24640	COG1620	l-lactate permease
J5V93_RS24650	COG2389	metal-binding protein
J5V93_RS24660	COG1368	sulfuric ester hydrolase activity
J5V93_RS24670	COG0791	NLP P60 protein
J5V93_RS24670	COG1388	LysM domain
J5V93_RS24675	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V93_RS24685	COG1215	transferase activity, transferring glycosyl groups
J5V93_RS24690	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
J5V93_RS24695	COG3584	3D domain protein
J5V93_RS24695	COG1388	LysM domain
J5V93_RS24720	COG4715	Zinc finger, swim domain protein
J5V93_RS24725	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5V93_RS24765	COG0577	efflux transmembrane transporter activity
J5V93_RS24770	COG1136	(ABC) transporter
J5V93_RS24805	COG5002	protein histidine kinase activity
J5V93_RS24805	COG3850	Histidine kinase
J5V93_RS24810	COG0745	RESPONSE REGULATOR receiver
J5V93_RS24820	COG1316	TRANSCRIPTIONal
J5V93_RS24830	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
J5V93_RS24850	COG0438	transferase activity, transferring glycosyl groups
J5V93_RS24860	COG1215	transferase activity, transferring glycosyl groups
J5V93_RS24870	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
J5V93_RS24875	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J5V93_RS24880	COG1086	Polysaccharide biosynthesis protein
J5V93_RS24885	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J5V93_RS24890	COG4464	protein tyrosine phosphatase activity
J5V93_RS24895	COG0489	protein tyrosine kinase activity
J5V93_RS24900	COG3944	biosynthesis protein
J5V93_RS24905	COG0489	protein tyrosine kinase activity
J5V93_RS24920	COG1609	Transcriptional regulator
J5V93_RS24930	COG0739	heme binding
J5V93_RS24945	COG3279	Response regulator of the LytR AlgR family
J5V93_RS24950	COG2385	sporulation resulting in formation of a cellular spore
J5V93_RS24965	COG4836	Membrane
J5V93_RS24970	COG1007	ATP synthesis coupled electron transport
J5V93_RS24975	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V93_RS24980	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
J5V93_RS24985	COG0713	ATP synthesis coupled electron transport
J5V93_RS24990	COG0839	Belongs to the complex I subunit 6 family
J5V93_RS25000	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
J5V93_RS25005	COG0649	NAD binding
J5V93_RS25010	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V93_RS25015	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V93_RS25020	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V93_RS25025	COG5001	Diguanylate cyclase
J5V93_RS25025	COG3300	MHYT domain
J5V93_RS25040	COG0355	proton-transporting ATP synthase activity, rotational mechanism
J5V93_RS25045	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
J5V93_RS25050	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
J5V93_RS25055	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
J5V93_RS25060	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
J5V93_RS25065	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
J5V93_RS25075	COG0356	it plays a direct role in the translocation of protons across the membrane
J5V93_RS25100	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
J5V93_RS25110	COG0698	ribose 5-phosphate isomerase
J5V93_RS25120	COG2190	(PTS) system
J5V93_RS25125	COG2259	Doxx family
J5V93_RS25130	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
J5V93_RS25140	COG1971	Probably functions as a manganese efflux pump
J5V93_RS25145	COG0009	L-threonylcarbamoyladenylate synthase
J5V93_RS25160	COG2890	protein-(glutamine-N5) methyltransferase activity
J5V93_RS25165	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
J5V93_RS25170	COG1435	thymidine kinase activity
J5V93_RS25180	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
J5V93_RS25185	COG1494	fructose-1,6-bisphosphatase
J5V93_RS25205	COG4821	SIS domain
J5V93_RS25210	COG0504	CTP synthase activity
J5V93_RS25215	COG3343	RNA polymerase activity
J5V93_RS25225	COG1960	acyl-CoA dehydrogenase activity
J5V93_RS25230	COG1960	acyl-CoA dehydrogenase activity
J5V93_RS25235	COG1250	3-hydroxyacyl-CoA dehydrogenase
J5V93_RS25240	COG0183	Belongs to the thiolase family
J5V93_RS25245	COG2181	nitrate reductase activity
J5V93_RS25245	COG0247	lactate metabolic process
J5V93_RS25250	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V93_RS25255	COG4294	response to UV
J5V93_RS25260	COG5001	Diguanylate cyclase
J5V93_RS25260	COG3300	MHYT domain
J5V93_RS25275	COG3227	Zinc metalloprotease (Elastase)
J5V93_RS25280	COG2197	response regulator
J5V93_RS25285	COG4585	Histidine kinase
J5V93_RS25290	COG0842	Transport permease protein
J5V93_RS25295	COG1131	(ABC) transporter
J5V93_RS25300	COG0024	Methionine aminopeptidase
J5V93_RS25305	COG2234	aminopeptidase activity
J5V93_RS25330	COG4506	Protein conserved in bacteria
J5V93_RS25335	COG1619	proteins homologs of microcin C7 resistance protein MccF
J5V93_RS25350	COG0010	Belongs to the arginase family
J5V93_RS25355	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
J5V93_RS25360	COG2814	Major facilitator Superfamily
J5V93_RS25365	COG0789	Transcriptional regulator
J5V93_RS25370	COG0584	glycerophosphoryl diester phosphodiesterase
J5V93_RS25375	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V93_RS25385	COG1994	Peptidase M50
J5V93_RS25395	COG1078	dGTPase activity
J5V93_RS25400	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V93_RS25405	COG1120	ATPase activity
J5V93_RS25410	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V93_RS25415	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V93_RS25420	COG4844	belongs to the
J5V93_RS25435	COG0280	phosphate acetyltransferase
J5V93_RS25440	COG3253	May function as heme-dependent peroxidase
J5V93_RS25450	COG3773	Cell wall hydrolase
J5V93_RS25460	COG2363	Small membrane protein
J5V93_RS25475	COG2233	PERMEase
J5V93_RS25480	COG0561	phosphatase activity
J5V93_RS25485	COG2814	Major facilitator Superfamily
J5V93_RS25490	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
J5V93_RS25495	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J5V93_RS25500	COG1131	(ABC) transporter
J5V93_RS25505	COG2755	lipolytic protein G-D-S-L family
J5V93_RS25510	COG1609	Transcriptional regulator
J5V93_RS25520	COG0460	homoserine dehydrogenase
J5V93_RS25525	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
J5V93_RS25530	COG2873	o-acetylhomoserine
J5V93_RS25545	COG2197	response regulator
J5V93_RS25550	COG4585	Histidine kinase
J5V93_RS25550	COG2203	Gaf domain
J5V93_RS25555	COG0351	phosphomethylpyrimidine kinase
J5V93_RS25560	COG3706	GGDEF domain
J5V93_RS25565	COG2879	small protein
J5V93_RS25570	COG1966	Carbon starvation protein
J5V93_RS25575	COG3279	Response regulator of the LytR AlgR family
J5V93_RS25580	COG0477	Major facilitator Superfamily
J5V93_RS25605	COG0840	transmembrane signaling receptor activity
J5V93_RS25615	COG1607	acyl-coa hydrolase
J5V93_RS25620	COG1216	Glycosyl transferase, family 2
J5V93_RS25630	COG1216	Glycosyl transferase, family 2
J5V93_RS25640	COG4485	Bacterial membrane protein, YfhO
J5V93_RS25645	COG0463	Glycosyl transferase, family 2
J5V93_RS25655	COG1309	transcriptional regulator
J5V93_RS25660	COG0488	(ABC) transporter
J5V93_RS25665	COG1309	transcriptional regulator
J5V93_RS25670	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J5V93_RS25675	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5V93_RS25675	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5V93_RS25680	COG0628	permease
J5V93_RS25690	COG1380	Effector of murein hydrolase LrgA
J5V93_RS25695	COG3279	Response regulator of the LytR AlgR family
J5V93_RS25700	COG3275	phosphorelay sensor kinase activity
J5V93_RS25705	COG2814	Major facilitator Superfamily
J5V93_RS25710	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
J5V93_RS25715	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
J5V93_RS25720	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J5V93_RS25770	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
J5V93_RS25775	COG1272	protein, Hemolysin III
J5V93_RS25800	COG1164	Oligoendopeptidase f
J5V93_RS25810	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
J5V93_RS25820	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J5V93_RS25825	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
J5V93_RS25830	COG4853	Protein conserved in bacteria
J5V93_RS25840	COG5002	protein histidine kinase activity
J5V93_RS25845	COG0745	RESPONSE REGULATOR receiver
J5V93_RS25875	COG0305	Participates in initiation and elongation during chromosome replication
J5V93_RS25880	COG0359	binds to the 23S rRNA
J5V93_RS25885	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
J5V93_RS25890	COG4241	membrane
J5V93_RS25900	COG0629	single-stranded DNA binding
J5V93_RS25905	COG0360	Binds together with S18 to 16S ribosomal RNA
J5V93_RS25910	COG0012	GTP binding
J5V93_RS25915	COG4481	Protein conserved in bacteria
J5V93_RS25920	COG0668	transmembrane transport
J5V93_RS25930	COG1475	DNA binding
J5V93_RS25935	COG1192	Involved in chromosome partitioning
J5V93_RS25940	COG1475	DNA binding
J5V93_RS25945	COG0357	Ribosomal RNA small subunit methyltransferase G
J5V93_RS25950	COG0445	tRNA wobble uridine modification
J5V93_RS25955	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
J5V93_RS25960	COG1847	R3H domain protein
J5V93_RS25965	COG0706	membrane insertase activity
J5V93_RS25970	COG0594	ribonuclease P activity
J5V93_RS25975	COG0230	Belongs to the bacterial ribosomal protein bL34 family
J5V93_RS25980	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
J5V93_RS25985	COG0592	DNA-directed DNA polymerase activity
J5V93_RS25990	COG2501	S4 domain
J5V93_RS25995	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J5V93_RS26000	COG0187	DNA topoisomerase II activity
J5V93_RS26005	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J5V93_RS26040	COG0516	GMP reductase activity
J5V93_RS26040	COG0517	IMP dehydrogenase activity
J5V93_RS26045	COG1686	Belongs to the peptidase S11 family
J5V93_RS26050	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
J5V93_RS26055	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
J5V93_RS26075	COG1428	Deoxynucleoside kinase
J5V93_RS26080	COG1428	Deoxynucleoside kinase
J5V93_RS26085	COG1335	isochorismatase
J5V93_RS26090	COG0590	tRNA wobble adenosine to inosine editing
J5V93_RS26100	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
J5V93_RS26105	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
J5V93_RS26110	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
J5V93_RS26155	COG1982	Orn Lys Arg decarboxylase major
J5V93_RS26160	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
J5V93_RS26165	COG0470	DNA polymerase III
J5V93_RS26170	COG1774	PSP1 C-terminal conserved region
J5V93_RS26175	COG4467	Involved in initiation control of chromosome replication
J5V93_RS26180	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
J5V93_RS26190	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
J5V93_RS26195	COG2002	toxin-antitoxin pair type II binding
J5V93_RS26205	COG0084	hydrolase, TatD family'
J5V93_RS26215	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
J5V93_RS26225	COG4466	Protein conserved in bacteria
J5V93_RS26235	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
J5V93_RS26240	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J5V93_RS26245	COG0251	oxidation-reduction process
J5V93_RS26250	COG2088	sporulation resulting in formation of a cellular spore
J5V93_RS26255	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
J5V93_RS26275	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
J5V93_RS26280	COG2002	toxin-antitoxin pair type II binding
J5V93_RS26285	COG2244	polysaccharide biosynthetic process
J5V93_RS26290	COG3956	TIGRFAM MazG family protein
J5V93_RS26295	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
J5V93_RS26315	COG1098	S1 RNA binding domain
J5V93_RS26330	COG2208	phosphoserine phosphatase activity
J5V93_RS26340	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
J5V93_RS26345	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
J5V93_RS26350	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
J5V93_RS26355	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
J5V93_RS26360	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J5V93_RS26365	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
J5V93_RS26370	COG0512	Glutamine amidotransferase of anthranilate synthase
J5V93_RS26375	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5V93_RS26380	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
J5V93_RS26385	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
J5V93_RS26390	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
J5V93_RS26395	COG1396	sequence-specific DNA binding
J5V93_RS26400	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J5V93_RS26405	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
J5V93_RS26490	COG3880	PFAM UvrB UvrC protein
J5V93_RS26495	COG3869	Catalyzes the specific phosphorylation of arginine residues in
J5V93_RS26500	COG0542	response to heat
J5V93_RS26505	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
J5V93_RS26510	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
J5V93_RS26515	COG4956	integral membrane protein (PIN domain superfamily)
J5V93_RS26520	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
J5V93_RS26530	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J5V93_RS26535	COG1045	serine acetyltransferase
J5V93_RS26540	COG0215	cysteine-tRNA ligase activity
J5V93_RS26550	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J5V93_RS26555	COG3688	RNA-binding protein containing a PIN domain
J5V93_RS26565	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J5V93_RS26570	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J5V93_RS26575	COG0250	Participates in transcription elongation, termination and antitermination
J5V93_RS26580	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
J5V93_RS26585	COG0081	regulation of translation
J5V93_RS26590	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
J5V93_RS26595	COG0222	ribosome binding
J5V93_RS26600	COG2813	Specifically methylates the guanine in position
J5V93_RS26605	COG0085	RNA polymerase activity
J5V93_RS26610	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
J5V93_RS26615	COG1358	cellular component organization or biogenesis
J5V93_RS26620	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
J5V93_RS26630	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
J5V93_RS26635	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
J5V93_RS26640	COG0051	transcription antitermination factor activity, RNA binding
J5V93_RS26645	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
J5V93_RS26650	COG0088	Forms part of the polypeptide exit tunnel
J5V93_RS26655	COG0089	rRNA binding
J5V93_RS26660	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
J5V93_RS26665	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
J5V93_RS26670	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
J5V93_RS26685	COG0255	Belongs to the universal ribosomal protein uL29 family
J5V93_RS26690	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
J5V93_RS26700	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
J5V93_RS26705	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
J5V93_RS26715	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
J5V93_RS26725	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
J5V93_RS26735	COG1841	ribosomal large subunit assembly
J5V93_RS26740	COG0200	Binds to the 23S rRNA
J5V93_RS26745	COG0201	protein transport
J5V93_RS26750	COG0563	adenylate kinase activity
J5V93_RS26755	COG0024	Methionine aminopeptidase
J5V93_RS26765	COG0257	Belongs to the bacterial ribosomal protein bL36 family
J5V93_RS26770	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
J5V93_RS26775	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
J5V93_RS26800	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
J5V93_RS26810	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
J5V93_RS26815	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
J5V93_RS26825	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V93_RS26830	COG0489	protein tyrosine kinase activity
J5V93_RS26840	COG2194	sulfuric ester hydrolase activity
J5V93_RS26845	COG0726	polysaccharide deacetylase
J5V93_RS26925	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
J5V93_RS26930	COG4856	YbbR-like protein
J5V93_RS26935	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J5V93_RS26960	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS26965	COG2011	ABC-type metal ion transport system permease component
J5V93_RS26975	COG1464	Belongs to the NlpA lipoprotein family
J5V93_RS26980	COG0604	alcohol dehydrogenase
J5V93_RS26990	COG0277	FAD linked oxidase domain protein
J5V93_RS26995	COG2271	Major facilitator Superfamily
J5V93_RS27005	COG2814	Major facilitator Superfamily
J5V93_RS27020	COG0601	transmembrane transport
J5V93_RS27025	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V93_RS27030	COG0444	Belongs to the ABC transporter superfamily
J5V93_RS27035	COG4608	Belongs to the ABC transporter superfamily
J5V93_RS27040	COG4166	transmembrane transport
J5V93_RS27065	COG4166	transmembrane transport
J5V93_RS27070	COG4166	transmembrane transport
J5V93_RS27075	COG0656	L-ascorbic acid biosynthetic process
J5V93_RS27095	COG4149	molybdate abc transporter
J5V93_RS27100	COG0725	ABC transporter, periplasmic molybdate-binding protein
J5V93_RS27105	COG1910	domain protein
J5V93_RS27120	COG0697	spore germination
J5V93_RS27135	COG0204	Acyl-transferase
J5V93_RS27145	COG1609	Transcriptional regulator
J5V93_RS27155	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V93_RS27170	COG5298	Protein conserved in bacteria
J5V93_RS27190	COG0488	(ABC) transporter
J5V93_RS27195	COG4585	Histidine kinase
J5V93_RS27200	COG2197	response regulator
J5V93_RS27205	COG1131	(ABC) transporter
J5V93_RS27210	COG0842	Transport permease protein
J5V93_RS27210	COG1511	domain protein
J5V93_RS27215	COG0842	Transport permease protein
J5V93_RS27225	COG0747	negative chemotaxis
J5V93_RS27235	COG0601	transmembrane transport
J5V93_RS27240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V93_RS27245	COG0444	Belongs to the ABC transporter superfamily
J5V93_RS27250	COG4608	Belongs to the ABC transporter superfamily
J5V93_RS27255	COG0561	phosphatase activity
J5V93_RS27285	COG3185	4-Hydroxyphenylpyruvate dioxygenase
J5V93_RS27290	COG0179	Fumarylacetoacetate (FAA) hydrolase
J5V93_RS27300	COG0531	amino acid
J5V93_RS27305	COG2814	Major facilitator Superfamily
J5V93_RS27315	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
J5V93_RS27325	COG4294	response to UV
J5V93_RS27330	COG0705	Rhomboid family
J5V93_RS27335	COG0736	holo-[acyl-carrier-protein] synthase activity
J5V93_RS27340	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
J5V93_RS27350	COG0864	Transcriptional regulator
J5V93_RS27355	COG2337	Toxic component of a toxin-antitoxin (TA) module
J5V93_RS27360	COG2183	response to ionizing radiation
J5V93_RS27460	COG0802	atpase or kinase
J5V93_RS27465	COG1214	PFAM Peptidase M22, glycoprotease
J5V93_RS27470	COG0456	acetyltransferase
J5V93_RS27480	COG0488	(ABC) transporter
J5V93_RS27485	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
J5V93_RS27495	COG1266	CAAX protease self-immunity
J5V93_RS27500	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
J5V93_RS27505	COG0459	protein refolding
J5V93_RS27510	COG0519	Catalyzes the synthesis of GMP from XMP
J5V93_RS27510	COG0518	GMP synthase (glutamine-hydrolyzing) activity
J5V93_RS27515	COG2252	PERMEase
J5V93_RS27525	COG5002	protein histidine kinase activity
J5V93_RS27555	COG1028	Short-chain dehydrogenase reductase Sdr
J5V93_RS27610	COG0673	inositol 2-dehydrogenase activity
J5V93_RS27615	COG0673	inositol 2-dehydrogenase activity
J5V93_RS27620	COG2169	Transcriptional regulator
J5V93_RS27855	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J5V93_RS27865	COG0662	Cupin 2, conserved barrel domain protein
J5V93_RS27865	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
J5V93_RS27930	COG3344	reverse transcriptase
J5V93_RS27955	COG2311	Membrane
J5V93_RS27985	COG1696	Membrane protein involved in D-alanine export
J5V93_RS28000	COG0745	RESPONSE REGULATOR receiver
J5V93_RS28020	COG1279	arginine transmembrane transporter activity
J5V93_RS28025	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V93_RS28030	COG1175	transmembrane transport
J5V93_RS28035	COG0395	ABC-type sugar transport system, permease component
J5V93_RS28060	COG3842	ATPase activity
J5V93_RS28065	COG5002	protein histidine kinase activity
J5V93_RS28075	COG1136	(ABC) transporter
J5V93_RS28090	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
J5V93_RS28100	COG2707	UPF0756 membrane protein
J5V93_RS28110	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J5V93_RS28240	COG2814	Major facilitator Superfamily
J5V93_RS28360	COG4977	sequence-specific DNA binding
J5V93_RS28375	COG0083	homoserine kinase activity
J5V93_RS28390	COG1309	transcriptional regulator
J5V93_RS28395	COG2814	Major facilitator Superfamily
J5V93_RS28405	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
J5V93_RS28405	COG2508	Transcriptional regulator
J5V93_RS28410	COG0686	Belongs to the AlaDH PNT family
J5V93_RS28475	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
J5V93_RS28525	COG1396	sequence-specific DNA binding
J5V93_RS28545	COG0840	transmembrane signaling receptor activity
J5V93_RS28550	COG2162	N-hydroxyarylamine O-acetyltransferase activity
J5V93_RS28570	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
J5V93_RS28575	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V93_RS28580	COG0772	Belongs to the SEDS family
J5V93_RS28585	COG2239	Acts as a magnesium transporter
J5V93_RS28595	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J5V93_RS28605	COG2162	N-hydroxyarylamine O-acetyltransferase activity
J5V93_RS28610	COG0519	Catalyzes the synthesis of GMP from XMP
J5V93_RS28620	COG1278	Cold shock
J5V93_RS28640	COG0024	Methionine aminopeptidase
J5V93_RS28675	COG4974	Belongs to the 'phage' integrase family
J5V93_RS28755	COG2357	RelA SpoT domain protein
J5V93_RS28760	COG2814	Major facilitator Superfamily
J5V93_RS28815	COG0776	regulation of translation
J5V93_RS28855	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J5V93_RS28875	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J5V93_RS28905	COG3344	reverse transcriptase
J5V93_RS28960	COG0640	Transcriptional regulator
J5V93_RS28970	COG0457	Tetratricopeptide repeat
J5V93_RS29025	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
J5V93_RS29030	COG2040	homocysteine
J5V93_RS29035	COG0833	amino acid
J5V93_RS29135	COG1725	Transcriptional regulator
J5V93_RS29140	COG1131	(ABC) transporter
J5V93_RS29175	COG1329	Transcriptional regulator
J5V93_RS29240	COG0457	Tetratricopeptide repeat
J5V93_RS29270	COG1132	(ABC) transporter
J5V93_RS29320	COG1396	sequence-specific DNA binding
J5V93_RS29340	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
J5V93_RS29370	COG0653	protein targeting
J5V93_RS29470	COG0367	asparagine synthase
J5V93_RS29545	COG0542	response to heat
J5V93_RS29555	COG3397	chitin binding
J5V93_RS29635	COG1132	(ABC) transporter
J5V93_RS29685	COG1404	Belongs to the peptidase S8 family
J5V93_RS29695	COG2814	Major facilitator Superfamily
J5V93_RS29700	COG2234	aminopeptidase activity
J5V93_RS29710	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V93_RS29725	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J5V93_RS29730	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5V93_RS29735	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J5V93_RS29745	COG0456	acetyltransferase
J5V93_RS29780	COG1956	GAF domain-containing protein
J5V93_RS29860	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J5V93_RS29860	COG0551	DNA topoisomerase type I activity
J5V93_RS29930	COG1388	LysM domain
J5V93_RS29975	COG0463	Glycosyl transferase, family 2
J5V93_RS29995	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J5V93_RS30000	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
J5V93_RS30005	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5V93_RS30010	COG0438	transferase activity, transferring glycosyl groups
J5V93_RS30025	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J5V93_RS30030	COG0438	transferase activity, transferring glycosyl groups
J5V93_RS30035	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J5V93_RS30120	COG3773	Cell wall hydrolase
J5V93_RS30180	COG4166	transmembrane transport
J5V93_RS30240	COG0582	viral genome integration into host DNA
J5V93_RS30250	COG3620	sequence-specific DNA binding
J5V93_RS30475	COG0561	phosphatase activity
J5V93_RS30565	COG2076	Multidrug Resistance protein