E1A90_RS02420 NONE
E1A90_RS02425 NONE
         alr NONE
E1A90_RS02430    3386 ..    3407 + -11.7  -4.84274   CAAAACAAAACAAAA           GGAAAGAAG GTAT CTTCTTTCC            TTTTTACTATAGTTG 100 61
E1A90_RS02440    7245 ..    7256 +    -3  -3.08278   AGAAAAGGGAGGAAT                TATG AATA CATA                 TATCTATATGGTTAG  45 249
E1A90_RS02445 NONE
E1A90_RS00035 NONE
        pepT NONE
E1A90_RS00040 NONE
E1A90_RS02460 NONE
E1A90_RS02465   11497 ..   11513 +  -2.3  -5.10516   GACTCCCAATTTGTC              CAATTTG ATG CAAATTC              TTTTATTTCATTTTT  69 89
         xth   14379 ..   14410 +  -7.4  -4.90917   AAATTTCTAAAAAAA      GAAGTATCTCGCTAA TAA TAGGCG-GATACTTC      TTTTTAATTCAGTTT  86 31
E1A90_RS02490 NONE
        mgtE NONE
E1A90_RS02495 NONE
E1A90_RS00070 NONE
E1A90_RS02500 NONE
E1A90_RS02505 NONE
E1A90_RS00075 NONE
E1A90_RS02510   19369 ..   19409 + -15.2  -4.43307   CAAGTGTAGAAGACG TATATGAAAAAAGGTAAGC AATT GCTTACCTTTTTTCAT-TA  TTGTTTTATTGCCAC 100 32
E1A90_RS00085   21320 ..   21345 +  -9.9  -5.64274   ATAGGGCTGAAAAAA         GGTTATGG-ATG AAA CATTCCATAACC         TTTTTTTATAAGTAG 100 95
E1A90_RS02525   21808 ..   21837 + -10.9  -4.84918   ATATAGGAAGAAAAA       GTCTCAATTTACA CGTG TGAAAATTGAGAC        TTTTATATTTGTGGA 100 45
E1A90_RS02530 NONE
E1A90_RS00090 NONE
        copZ   22803 ..   22832 +  -9.5   -4.2679   TTTTTAATATAGAAA       TAAATCGTACTTT ATAT GGAGTACGATTTA        TTTTGCTAAAAATTA  90 44
        cadA NONE
E1A90_RS02545 NONE
E1A90_RS00100 NONE
E1A90_RS00105 NONE
E1A90_RS02560 NONE
E1A90_RS00110 NONE
E1A90_RS02565   29689 ..   29718 +  -9.5  -5.80727   TACATAAATAAAAAA       CAACAATAGGT CATATAAA ACCTATTGTTG        TTTTTTATTATTTTT 100 43
        gabP NONE
E1A90_RS02585 NONE
E1A90_RS00125 NONE
E1A90_RS02590 NONE
E1A90_RS00130   33876 ..   33889 +  -3.9  -2.93684   ATGAAAAAATTGTGG               TATAC AAAA GTATA                GTTGCTTTTTATATA  47 62
E1A90_RS02595   35094 ..   35143 + -16.2  -3.88985   TCTTTATAAGTGAAG CGAGAGAAGAAACCTATTTGAT TGTTGT ATCAAATAGGTTTCTTTTTTTG TTTATAACCGGTTTT 100 32
E1A90_RS02600 NONE
E1A90_RS00140 NONE
        pfkB NONE
E1A90_RS02610   38788 ..   38811 +  -5.3   -4.8622   AATAAAAGATAAAAA          GGGACAGCT AATAGG AGTTGTTCC           TTTTTCGTTACAAAA  75 36
E1A90_RS02615   40108 ..   40137 +  -7.1  -5.71712   TTATTAAAATAAAAA       ACGGCTGCTTAAA AATG TCTAAGCGGCCGC        TTTTTTTATATAAGA 100 42
        miaA NONE
         hfq   41807 ..   41823 + -12.3  -5.37593   GTACATAATAAAAAA              GAGCGAG CTT CTCGCTC              TTTTTTAATTTGCCA 100 53
E1A90_RS00180   45914 ..   45930 +  -3.7  -2.97653   GATTGTCGTTAAAGC              GAGACAT TAA ATCTCTC              CTTTCTAATAAGAAT  47 34
E1A90_RS00185   46922 ..   46939 +  -4.1  -4.20516   AACGTAACGTTTAAT             GGTTGAA GACT TTCGGCC              TTTATTCAATAAAAA  61 346
        hflX NONE
E1A90_RS00200 NONE
E1A90_RS00205 NONE
E1A90_RS02660   51593 ..   51610 +  -9.1  -5.21709   ATTTCTTAAAGGAAA             GCTGTCG ATTT CGGCAGC              TTTTTTCATGTGAAA  95 43
        glnR NONE
        glnA   53533 ..   53575 + -14.5  -4.05033   TGTCTCTATACTAAG AGA-GAAAAAGCCCTAATAC TACG GTATTAGGGCTTTTTCGTCA TTTATCTACAGTGAA 100 27
E1A90_RS02675 NONE
E1A90_RS02680   55358 ..   55411 + -13.7  -2.73159   GATGCCCCTATTTTA TTAAAGTTTCTAACTATGTGTTTTT AATA AAGAGAATATAGTTAGAAACTTTAA ATTTGAAAGAGTTAA 100 233
E1A90_RS02685 NONE
E1A90_RS02690 NONE
E1A90_RS02695 NONE
E1A90_RS00240 NONE
E1A90_RS02700 NONE
E1A90_RS00245   61458 ..   61468 +    -4  -4.33248   ATTTACAGATAAAGA                 TCAA AAG TTGA                 TTTATTATGCAGTTC  60 63
E1A90_RS02710 NONE
E1A90_RS02715   64407 ..   64419 +  -4.1  -3.11218   ATATGTTTACGCACT                TTCCG CAG TGGAA                TATTAACATATTTAA  47 342
E1A90_RS02725   66639 ..   66651 +  -4.9  -4.03978   TAGGCTTTGATACAG                CTATA ATT TATAG                TTTATATAGGCCATT  63 231
E1A90_RS00300 NONE
E1A90_RS02735   70778 ..   70806 +   -12  -5.30348   ATAGAATAGAGAAAA        GCTATTATGTTT TTTAT AAACATAATAGC        TTTTTATTATTACGT 100 224
E1A90_RS00310   71505 ..   71518 +  -8.1  -3.73088   GTCAATTAAGTTTGG               TGGGC CCCC GCCCA                TTATTAATAGAATAT  75 28
E1A90_RS02745   73448 ..   73468 +  -6.3   -2.9914   ATTAAAGCATATGTT            TTTAGATAC ATA GTATTTAAA            TATGTATAAAGGATG  59 13
E1A90_RS02750   75112 ..   75125 +  -3.1  -3.34357   ACACCAGAGTCAGTT               GGTGA ACAA TTACC                CTTTTATAATTATGA  46 483
E1A90_RS02760   77443 ..   77459 + -10.9  -2.95521   ATGCAACGTAAAATA              CTCCCAT TGC ATGGGAG              TGTAATTGCTATAGA  83 450
        tnpA NONE
E1A90_RS02770 NONE
E1A90_RS02775 NONE
E1A90_RS00345 NONE
E1A90_RS02780 NONE
E1A90_RS02785   81869 ..   81889 +  -3.3  -3.09516   AAGATTGAATGAAAT            CTTGTATTA TTG TAATTCGAG            TTGAATGATAGCCCG  46 47
E1A90_RS00365 NONE
E1A90_RS02790 NONE
E1A90_RS02795 NONE
E1A90_RS00370 NONE
E1A90_RS02800 NONE
E1A90_RS00375   83945 ..   83962 +  -2.7  -3.62478   GTAGACGGAAATGAT             CTTTTCT TTAT AGAAACG              TTTAACAGTTGCTTC  48 135
E1A90_RS02810 NONE
E1A90_RS00385 NONE
E1A90_RS02815   85540 ..   85556 + -12.3  -5.80003   AAAATTAAATTAAAA              GATGGGC ATA GCCCATC              TTTTTTATTTGTTAA 100 28
E1A90_RS00390   87001 ..   87025 +  -7.9  -5.61596   CGTTATCAATCAGAA          GAACGTTTGCA TTT TGAGAACGTTC          TTTTTTTATGAGAGT 100 44
        phnC NONE
E1A90_RS00405 NONE
        phnE NONE
E1A90_RS00415 NONE
        phnE   90759 ..   90775 +  -6.6  -5.69068   TAATTTGTTTTAAAA              GCATCT AATTC AGATGC              TTTTTTGTATTTTTA 100 38
         tkt   93055 ..   93089 + -18.2  -2.97122   ATGCTTTAATGATTT     TAGAAAAATCTCTCCA GCA TGGGGAGATTTTTCTA     TGTAATTGAGTTTTT 100 32
        sirA NONE
E1A90_RS02855   93949 ..   93979 + -12.7  -4.48987   CAAACAAAATAAGCG       CAAAAGGGCACTC TTACC GAGTGCCCTTTTC       TTTTGGTTATAAAAC 100 29
E1A90_RS00455   95294 ..   95304 +  -3.2  -2.92777   TAACACTTCACGGTG                 TGCG TTC TGCA                 ATTTCATATGTACCG  43 145
E1A90_RS02865   97574 ..   97595 +  -9.5  -5.53436   AGGGAGTTTGCAACA           GGCCTTGTA GAAT TACAAGGTC            TTTTTTCTATTCTCT 100 16
E1A90_RS02870   98783 ..   98802 +  -6.4  -4.65078   AAAGTGAACTTAAAA            GGTATCTC GACT GAGGTGCC             TTTTATTAAAAATAT  78 39
E1A90_RS02875   99948 ..   99962 +  -5.8  -2.50307   TTGCGAAGTAAAAAA               TAAAGT AAA ACTTTA               ATTAGTGGGGGTTTA  54 30
E1A90_RS02880  100651 ..  100673 +  -9.3  -4.67943   GAAATAGTGAGAGGA           GAAGCTATA TCTTT TATAGCTTC           TTTTCTATATTCCAA  90 39
E1A90_RS00515 NONE
E1A90_RS02885  102593 ..  102612 +   -10  -5.93252   GTAAATAATGGAAAG            GCATTCGC TTTG GCGAGTGC             TTTTTTATTTTTCAA 100 33
E1A90_RS02890  102931 ..  102947 +  -5.8  -5.42975   AGAAAAGTAGTCAGA              GCATCC GCTTA GGGTGC              TTTTTGTTTGTATAG  86 58
E1A90_RS02895  104063 ..  104091 +   -14  -4.68384   AATATGATCGGATAA        GAAAGCTGGCCA ATTTA TGGTCAGCTTTC        TTTTGTTCAATGAGT 100 326
E1A90_RS00540  105636 ..  105646 +    -4  -3.86897   TCGATTCCATACTGT                 GATA ATG TATC                 TTTGTAACGAATGAC  56 321
E1A90_RS02920  107015 ..  107041 +  -7.4  -6.12458   TCGTTAAACAAAAAA         CGGAAATGTA ACTAAAG TGCATTTCCG         TTTTTTGTTTTTTTA 100 88
E1A90_RS00565 NONE
E1A90_RS02925  107763 ..  107798 + -10.6  -3.08201   AAAGTCATATGAAAC    GAGGAGAAAGGCATGA GAAA TCATGGCTTTTTCTTC     ATTTTACACATGTTA  83 10
E1A90_RS02930 NONE
E1A90_RS00585 NONE
E1A90_RS02935  109730 ..  109752 + -12.1  -5.40464   ACAGCATAAGCAAAA           GCCGTTAAG GGTAA CTTAACGGC           TTTTTGTTTGTAATA 100 32
        ccdA  113139 ..  113153 +  -4.4   -4.2349   ACTAACGGAAAAGCA               TATAAT AAA ATTATA               TTTTGCATATAGCCA  63 67
E1A90_RS02960  113718 ..  113737 + -10.8   -5.5112   ATATGTATAAAGAAA            CAACGTCT GATT AGACGTTG             TTTTTTGTTAATCAC 100 49
E1A90_RS00620 NONE
E1A90_RS02980 NONE
E1A90_RS02985  116491 ..  116506 +    -9  -4.25502   GGAAAACGTGTAAAA              GCTAGC GAAT GCTAGC               TCTTTTCTTTTTACA  88 28
        hutP  118116 ..  118166 + -20.9  -4.39571   GTCTATTAGTTAGAA GGGGGCCTTAT-TTTTTAGGACAG GAGT CTGTCTTAAAAAGATAAGGTCCCC TTTTGCCTTTATAAG 100 51
E1A90_RS00645 NONE
        hutH NONE
        hutU NONE
        hutI NONE
E1A90_RS00675 NONE
        hutG  123681 ..  123708 +  -3.5  -6.09196   GTCATTATATAAAAA        TACATCGCTAT TTATAT GTAGTGATGTG         TTTTTTTGTTTTACA  88 80
E1A90_RS03020  124828 ..  124847 + -10.8  -5.24003   TGGTCAACTAAAAAA            GGTTTCCT AATT AGGAAACC             TTTTTAATTTTTGTT 100 474
E1A90_RS03025 NONE
E1A90_RS00700 NONE
E1A90_RS03030  128064 ..  128083 +  -9.4  -4.62783   TAGTTTTTTTGTCAA            TTATCTCG AATT CGAGATAA             TTTTTGAACTAAATG  93 334
E1A90_RS03035 NONE
E1A90_RS03040  129835 ..  129867 +   -13  -5.80364   AAATATTAGACTAAA      TCGAGTGTAAAATC ATAAA GATTTTATACTCGA      TTTTTTTGTTGCAAT 100 39
E1A90_RS03045  130781 ..  130807 +  -8.8  -4.66953   TATACAAAAAATAAA         GCTCAGAGTC ATATAGG GACTTTGAGC         TTTTTAACGTATTAG  89 53
E1A90_RS03060 NONE
E1A90_RS00740  133920 ..  133934 +  -2.9  -2.54371   TATATGAAATTGAAA               GTTTT AGGTA AAAAC               AGTTTATTTCGGAAA  42 165
E1A90_RS03070 NONE
E1A90_RS03075 NONE
E1A90_RS03080  135546 ..  135581 + -15.8  -5.03227   AGAGAAGAATGAGGG    TAAATAAAAAAGAGCC AGAT GGCTCTTTTTTATTTG     TTTTCTTTATGCTCT 100 19
E1A90_RS03095  137334 ..  137355 +  -7.4  -5.88061   GGTTCATAACGAAAA           CTCCTTTA AATGAA TAAAGGAG            TTTTTTTGGTTTTTT 100 232
E1A90_RS03100 NONE
E1A90_RS03105 NONE
E1A90_RS03110  139937 ..  139994 +   -12  -2.90492   AGAATTTTAGTATAT TTTATCTTAGTATTTTCTGAATTATTTC CAAA GAAATAATTCAGAAAATAC-A-GAAAAA TATCGTAATTATTTG  88 31
E1A90_RS03115 NONE
E1A90_RS03120  142390 ..  142412 +  -8.5  -5.47964   GGATAAGAAAAAGGA           GAAACACGT TACTT GCGTGTTTC           TTTTTATTATTTTGT 100 35
E1A90_RS03125 NONE
E1A90_RS03130  144989 ..  145018 +  -8.1  -5.02476   TATTATTTGAGAAAG       TAGAAAACTAG CAAGATAA CTAGTTTTCTA        TTTTTTCAGGAATAT  91 15
E1A90_RS03140 NONE
E1A90_RS00810 NONE
E1A90_RS00815 NONE
E1A90_RS03150  148086 ..  148106 +  -9.1  -6.22802   TAGAAAAAGGAAAAA            GAAAGCAGA TCC TTTGCTTTC            TTTTTTTTTGTAAGA 100 53
E1A90_RS03155  149382 ..  149420 + -23.4  -4.45693   ATACATGCGAAATAA   CATAAGCCCCAGCAAACT AAA AGGTTGCTGGGGCTTATG   TTTGTATTTATATTA 100 26
E1A90_RS03170  150478 ..  150499 +  -8.8  -2.95404   TAGAAAAGTGAAAAA           GGTTGTTG TGAATT CAACAACC            TCATTACTTTTAGTG  71 30
        pdaB  151245 ..  151281 + -14.8  -2.61094   ACGTTATAAACATTA   GAGAAAATCCCAAAAGG TATA CCTTTTGGGATTTT-TC    GTTACTGATTCTTTT 100 25
E1A90_RS00865 NONE
        acnA  154484 ..  154508 + -17.3  -3.83026   AATGTATATTTTAAA          GAGGGATGAGA TTT TCTCATCCCTC          TTTAGTATGAAAAAA 100 63
E1A90_RS03190  155467 ..  155502 + -23.6  -4.77165   ATGAGTAAACAAAGA    GGAAAGGGATGAAACC ATTT GGTTTCATCCCTTTCC     TTTTATTATGCAAAA 100 141
E1A90_RS03195 NONE
E1A90_RS00880  157422 ..  157445 +  -2.4  -3.60792   TTTCTACGGCATCAT          GATTTGTAGA AATT TCAACAACTC           TTTCACCGTTGAAAA  47 202
E1A90_RS00885 NONE
E1A90_RS00890 NONE
E1A90_RS03205  159067 ..  159079 +  -3.4  -2.55074   TTATTTCTAATTATA                TGGT TCATC ACCA                TAACTTGGGGTTGAA  44 227
E1A90_RS03210 NONE
E1A90_RS00900 NONE
E1A90_RS03215 NONE
E1A90_RS03220  160959 ..  160997 +  -7.6  -4.63527   AATTAAAATAACGGT   GAAAAGGTGGAGATGG AATATAA TCATTTCTGCCTTTTC   TTTTTCAAGTAGTGA  84 30
E1A90_RS03225  162022 ..  162048 + -13.1  -5.24129   CGATGGTGTAAAAAA         TCCCATGTGCA ATATA TGCGCATGGGA         TTTTTTATCAAAACA 100 30
E1A90_RS03230 NONE
        sspN NONE
E1A90_RS00920  163085 ..  163099 +  -7.2  -3.32022   TTGAGCTCGTTTTCG               GTACAA GTG TTGTAC               TTAATGTGTACCCGC  66 40
E1A90_RS00930 NONE
E1A90_RS03245  164423 ..  164440 + -12.7  -5.95286   AGCGGGATAAAAAAA             GCGTGGC AGAA GCCACGC              TTTTTTATTTTTCAT 100 81
E1A90_RS03260  167607 ..  167628 +  -8.8  -3.11218   CTGTCCGCATCGTTG           TTTCGGGT GCCATA ACCCGAAA            TCTTGGAATGTTTGC  72 111
E1A90_RS03270  168745 ..  168774 +  -2.9  -5.64006   ATGTACAAAAAATAC       TTTTCTTGTCTAC AATG GTAGATAGGAGTA        TTTTTTTAATTGGAT  77 106
E1A90_RS03275  170121 ..  170151 + -18.6  -3.91412   ATAATCGGAATAAAA       GAAAGTCTCTTTCA TGT TGAAAGAGACTTTC       TTTATCGGATATACT 100 37
E1A90_RS03280  170842 ..  170863 +  -4.5   -5.0916   AGTAGCCTAGAGGAA           TCCTTGT GAAAAAAA ACAAGGA            TTTTTCTATTGAAAA  76 265
        parE NONE
        parC  175530 ..  175558 + -14.8  -5.24129   TGCGGGATAAAGGGA        GCATCTTGCTAT GAATG ATAGCAAGATGC        TTTTTTCTAAGCAAA 100 185
E1A90_RS03295  176832 ..  176848 + -10.9   -5.7946   GGTAAAATAAAAAAA              GACACGA ATT TCGTGTC              TTTTTTTATTAGGAA 100 31
E1A90_RS03305  178822 ..  178851 +  -6.1  -3.88946   TGCTTCCGCAAGCTC       TTTATAATAT-TGA AAT TCAGATATTATAAA       TTCTTGTATAAGCTC  66 492
E1A90_RS03315 NONE
E1A90_RS03320  180907 ..  180925 +  -6.7  -6.02919   GTTGTAAATTAGAAA             GTCCACT GAGAA AGTGGGC             TTTTTTTGTTTGTAA 100 34
E1A90_RS03325  182001 ..  182013 +  -4.9  -3.54459   CTTGATTCAATTGAT                CATTT CCA AAATG                TTTCAGGGCAATTCG  56 386
E1A90_RS01015 NONE
E1A90_RS01020 NONE
E1A90_RS03335 NONE
E1A90_RS01025  184887 ..  184897 +  -5.4  -4.21744   ATTTATATGATAGCG                 GTCA AGT TGAC                 TTTGCTTTATTAACT  67 427
E1A90_RS03350  189861 ..  189894 +  -7.6  -5.75342   AATAACAAATAAAAG     CATTTCTAAGGTGT AGTAAA GCACTTTGGAAATG      TTTTTTTTGCACCAC 100 39
E1A90_RS03355  190683 ..  190706 + -10.4  -3.93664   TGAAAAATAGAAAAA          GAGTTGGCTA AAGA TAGTCAACTC           TTTACTATGTTAGAT  89 31
E1A90_RS03365  191569 ..  191608 +   -16  -3.65812   TGAAGTATATGTGAA  GAAGTAAAGAGTGCGCTA ATTA TAGCGTGCTCTTTATTTC   TTGTATTGAAAAGAA 100 19
E1A90_RS03370  193963 ..  193987 +  -4.9  -4.66418   GTAGATAGGGTGTAA          GAGGGGCGG AGGAGGC CCGGCTCTC          TTTATTCTTCTTTTC  69 40
E1A90_RS01075  195783 ..  195796 +  -3.8   -2.7263   CGCGTTGAAATTGCG               CAGC AACAAG GCTG                GTTTGGAAAAATGAT  46 464
E1A90_RS03380  197593 ..  197612 + -12.2  -5.94214   AAGCGGAAGAATAAA            GCGCAGAT GAAC ATCTGCGC             TTTTTTTATTGTCTT 100 27
E1A90_RS03385  199484 ..  199517 +  -9.1  -5.38054   AAGGTATTACAATTA     TGGCTGTAGGCTAAAG TTT TTTTA-CCTATAGCCA     TTTTTATTTGTGCGC 100 39
E1A90_RS03390 NONE
        rarD  200878 ..  200897 +  -7.9   -5.4182   GCAAAAGTATCATAA            TGCGTAG TATTTT CTACGCA             TTTTTCTTTATACTT 100 26
E1A90_RS03400  201384 ..  201410 + -12.4  -5.26247   GGGTATTGTTTGTAA         GCAGAATGTGTG TAA TACACGTTCTGC         TTTTCTTTGTTTTCA 100 26
E1A90_RS03405  203337 ..  203361 + -15.9  -4.28994   AAGAAATATAGAAAA          TAAACCGAGAG ATA CTCTCGGTTTA          TTTTGATGGGTAGTA 100 23
        fabG  204446 ..  204489 + -15.7  -2.86676   GTGTAAATGAATACA TAATGA-AAAGAACCTGACC GAGTA GGTCAGGTTCTTTCTCGTTA ATTTAAGTTAATCCA 100 35
E1A90_RS01145 NONE
E1A90_RS03425 NONE
E1A90_RS01160 NONE
        panF NONE
E1A90_RS03435 NONE
E1A90_RS01165 NONE
E1A90_RS03440  210251 ..  210279 + -16.9  -4.96848   GCGACTTTTATTAAA        TAAACTCGGTGCT ATG AGCGCCGAGTTTA        TTTTTATGTACAAAC 100 23
E1A90_RS01175  210961 ..  210972 +  -7.2  -3.85817   ATCATTCTCCAATGG                GGGC AGCT GCCC                 TTTCTACAACAAGCT  72 154
E1A90_RS03450 NONE
E1A90_RS01190  212946 ..  212958 +  -2.7  -4.35646   GTGAAGTCTTCTTTA                TTTGT TTC ACGAA                TTTGTGTTTGCATAT  58 75
E1A90_RS01200  217759 ..  217775 +  -2.1   -5.4833   GCCGTACTAAACACG              GCAGCTG CTA CAGCCAC              TTTTTTATTAAATCC  76 189
E1A90_RS03475 NONE
E1A90_RS01225 NONE
E1A90_RS03480 NONE
E1A90_RS03485 NONE
E1A90_RS01230 NONE
E1A90_RS03490 NONE
        cspB NONE
E1A90_RS03500 NONE
E1A90_RS01235 NONE
E1A90_RS03505  227166 ..  227185 + -10.8  -4.81551   TATAAAGAAGAAAAA            CCGATTCT TAGT AGAATCGG             TTTTTAGTATAAATG 100 244
E1A90_RS01245 NONE
E1A90_RS03520  230230 ..  230260 + -19.2  -4.55721   GTTTCTATAATTGAA       GCCATCTCTTCTGA ATT TCAGAGGAGATGGC       TTTTGTGTACAGTTT 100 78
E1A90_RS03525 NONE
E1A90_RS01260 NONE
E1A90_RS03530  232021 ..  232031 +    -4  -2.94232   ATGCATCTGAAGAAG                 GAAA TCA TTTC                 GTTATTTAGGAGGAA  47 6
E1A90_RS03535  232853 ..  232878 +  -4.8  -3.05463   AATTAAGGTGTATTC         GTTGAATGGGC CTATT GCCTA-TCAAC         TTACATAAAAAAACT  52 41
E1A90_RS03540 NONE
E1A90_RS01275 NONE
E1A90_RS01280 NONE
E1A90_RS03555 NONE
E1A90_RS01285 NONE
E1A90_RS01290 NONE
E1A90_RS01295 NONE
E1A90_RS01300 NONE
E1A90_RS03560 NONE
E1A90_RS01310  238874 ..  238891 +  -2.6   -2.6933   GCAGCTGATTCATAG             CCGTAC CCTTTT GAACGG              AATTTTTCTAAAAAA  41 85
E1A90_RS03570  239856 ..  239883 +  -4.9  -5.03994   ATATAGTTTTAAAAA        AGAACTTGTAG GGAATA CTGCAAGTTCC         TTTTTGTATATAAAA  75 35
E1A90_RS03575 NONE
E1A90_RS03580  241745 ..  241769 +  -2.9  -3.03771   AGTGATTTGAGAAGG          GTGGTCAATTG AAA CAATTTATTAC          TGTTGAGAAATATAA  45 42
E1A90_RS03585  242325 ..  242350 +  -3.3  -3.80746   AAAAAAATTGACTAA         GGTGGCA GAAATCATATAA TGCCACC          TATTATTTTTGAAAC  54 61
E1A90_RS03590  243096 ..  243107 +  -4.4  -3.92602   AAAATAATGGTGGAG                TGTG AATA CACA                 TTTATAAAGTGTTAA  58 39
E1A90_RS03595 NONE
E1A90_RS03600  244672 ..  244704 + -16.5  -5.64873   AGTTGATATTATTTA      CTGGCTTGTAAACAT TAA AGGTTTACAAGCCAG      TTTTTTGTTGTTAGA 100 67
E1A90_RS01340 NONE
E1A90_RS01345  246961 ..  247013 + -11.7  -4.69622   CACTATGTCTATTTA GCAGCAAATAATAAAACTCCATTTT AAA AAAATGGAGTTTTATTATTATTTGA TTTTTACAATTATCT 100 354
E1A90_RS01360 NONE
E1A90_RS01365 NONE
E1A90_RS03620 NONE
E1A90_RS03625 NONE
E1A90_RS01370 NONE
E1A90_RS03630 NONE
E1A90_RS01375 NONE
E1A90_RS01380 NONE
E1A90_RS03635 NONE
E1A90_RS03640 NONE
E1A90_RS01385 NONE
E1A90_RS03645  253531 ..  253546 +    -4  -5.87688   AATAATGTGAAAAAA              CTGTTT AAAT AAGCAG               TTTTTTTTACATTAT  86 46
E1A90_RS01395  254358 ..  254370 +  -2.7  -5.67529   GTGGCGTCTTCAATT                CTTTT TAT AAGAG                TTTTTGTTTTTCGTT  81 517
E1A90_RS01405 NONE
E1A90_RS03665  256587 ..  256610 +  -6.8  -5.27399   TGAAGAAAATCTAAA          GAAATGTCGT GGGA GTGACATTTC           TTTTTTAATATGTTG  88 49
E1A90_RS03675  258286 ..  258315 + -12.4  -6.25578   ATAATTATTTAAAAA       TCGGTATTGATA TAAAAT TATCAATACCGA        TTTTTTTTATTTAGT 100 37
E1A90_RS03680  259755 ..  259792 +  -8.1  -4.20817   TTATGTTGCTTTATA   GACAAAATAGGTGAA-AT GCT ATCTTTACTTATTTTGTC   TTGTTTTAACATCTG  83 56
E1A90_RS01425 NONE
E1A90_RS03690  261510 ..  261525 +  -3.4  -3.55824   ACGGCTTTATATTTT              TTATAT AAAT ATATAA               TATTTCTCCGTGCTA  50 105
E1A90_RS01430  262203 ..  262233 +  -4.2  -5.02074   ACGGGATGGTTAAAT       TTATTGATGAACAT ACA ATGTTTATTAGTGA       TTTTTTAGGGGATCA  70 156
E1A90_RS03700 NONE
E1A90_RS01435  264106 ..  264125 +  -3.6  -3.21064   TTACAAGTTCTTGAT            GAGTTATT TCCT AATAACCC             TGTATTAATTATGGA  48 153
E1A90_RS01440 NONE
E1A90_RS03710 NONE
E1A90_RS01445 NONE
E1A90_RS01450 NONE
E1A90_RS01455 NONE
E1A90_RS01460 NONE
E1A90_RS01465 NONE
        amyS  271376 ..  271394 + -11.7  -5.46276   CTTGTAAATGTAAAA             GCTGCGG TATCC CCGCAGC             TTTTTTGTATATGTT 100 421
E1A90_RS01475 NONE
E1A90_RS01480 NONE
E1A90_RS03730 NONE
E1A90_RS03735  273980 ..  274013 +   -12   -5.7946   GTAATCATAAAAGAT     GCTATCTTTTTGTA GGGATA TACAGAAAGATAGC      TTTTTTTATTAAGCA 100 59
E1A90_RS03740  274836 ..  274874 +   -25  -4.49337   TATCTCAAATAGAAA   TAAGAAAGGGAAGCTAGA AAA TCTAGCTTCCCTTTCTTA   TTTTGTAAATTATGG 100 44
E1A90_RS03750  277098 ..  277112 +  -8.6  -2.80981   AGTTAAAAGCCATAG               TGGAGT TGT ACTCCA               ATGTTCTTTTGCCAT  71 263
E1A90_RS03760  278163 ..  278183 +  -9.8  -5.71983   AATTGCTTGAAAAAA            CGAAATCC CAGAT GGATTTCG            TTTTTTTGTAATTAG 100 51
E1A90_RS01510 NONE
E1A90_RS03775 NONE
E1A90_RS01515 NONE
E1A90_RS01520 NONE
E1A90_RS03780 NONE
E1A90_RS01525 NONE
E1A90_RS03785  282804 ..  282825 +  -8.7   -5.3798   TTTGCTATTAGGAAA           GGCCCTCTA AATT TGGAGGGTC            TTTTTATTGTTGTTA 100 47
E1A90_RS03790 NONE
E1A90_RS01535 NONE
E1A90_RS03795 NONE
E1A90_RS01540 NONE
E1A90_RS03800  284622 ..  284646 + -13.7  -5.63517   TTGGTGATGAAAAAA          GGTTTGTAGCA TAG TGCTGCAAACC          TTTTTTATTTGACGA 100 34
E1A90_RS01545  285724 ..  285737 +  -3.7  -4.42386   ATTGGTTTTCCGCCA               GCTGC TTTT GCTGC                TTTTATGGCTACAAA  63 155
E1A90_RS03810 NONE
       bshB2  287480 ..  287531 +   -14  -2.55706   GTACCTTCTAGTAGC TCTTACATAGAAAAAGCGCCGTCA CTTG TGATGGCGCTTTTTGTATTAAAGA CTATATATTTCTTAG 100 50
E1A90_RS03825  288873 ..  288887 +  -2.1  -3.33744   TTAGTATACATTAAG               TAGCT AAAAA AGCTG               ATTTTTAAGAAGAGA  44 27
E1A90_RS01570 NONE
E1A90_RS03830  289540 ..  289552 +  -9.1  -4.83243   GATATAAAAGAAAGA                GGGGA GCT TCCCC                TTTCTTTTATGTAAA  93 57
E1A90_RS01590 NONE
E1A90_RS01595 NONE
E1A90_RS03840  291717 ..  291750 + -12.7  -3.70444   TTAATTATGTAATAG     GAAAAGAGTCTCATT GGAA AATGAGACTCTTTTG      TATTGTTTGTTAACT 100 37
E1A90_RS03845  292904 ..  292927 + -10.4  -4.25053   ATATGATATATGAAA          CCGAGGTAGAT AGG ATCT-CCTCGG          TTATTTATATTGTAA  95 176
E1A90_RS03850 NONE
E1A90_RS01610  295380 ..  295392 +  -2.7  -5.00884   CAGATTCAGCATCAC                TCAAA GTT TTTGG                TTTTTTACCAACAAT  68 25
E1A90_RS03860 NONE
E1A90_RS03865 NONE
E1A90_RS03870  297827 ..  297874 +  -3.7  -3.45593   GGAATAATAAATAAG AAAAAGAACCGACT-CCT TTTCTCAACATCT AGGTAGTCGGTTCTTTTA TATTTAACATTTGTT  50 81
E1A90_RS03875 NONE
        asnB  300006 ..  300016 +  -2.6  -3.92377   AGAAGAGATGAATAC                 TAAT CCA ATTA                 ATTTTTTCTTATCAA  52 375
        yeiL NONE
E1A90_RS03900 NONE
E1A90_RS01640  301794 ..  301821 +  -5.6  -5.80951   GATGATACATATTAA        GGGGAGTTTACT TTAT AGTGAACTGCTC         TTTTTTATTTTGGAT  91 156
E1A90_RS03905  303105 ..  303117 +  -2.7  -2.87132   TTTGTTGAGAAAGTT                TTTTG TAT CGAAA                TATATAAAAAAACGG  42 164
E1A90_RS03910  303509 ..  303545 +   -14  -4.50193   GTGAAAAATGTTATA    TAAAGAAAGAAGCTGG GAGAA TCAGCTTCTTTCTTTG    TTTTACTTCGTTAAT 100 23
E1A90_RS03925  305469 ..  305488 +  -8.6  -4.65895   ATAAATTATAAAAAA            GATCATCC ATTT GGGTGATC             TTTTTCACTGCACCA  89 30
E1A90_RS03935  306203 ..  306222 + -12.2  -5.15167   AAGGAAAGTTAAAAA            GCGCACAA AATT TTGTGCGC             TTTTTATTAATGGTA 100 41
        bla2 NONE
E1A90_RS01670 NONE
        priS  309235 ..  309267 + -11.6   -3.7519   CGGAATATTATAACG      CCCAAAATAAAAAT GCGGA ATTTTTGTTTTGGG      TATTTCCTTTTCTTA  93 190
E1A90_RS03950 NONE
E1A90_RS03955  310838 ..  310851 +  -5.3  -3.57144   GCGATTTCTGTAAAA               GGATT AAAA AATCC                TTTAAAGATAAGGAA  59 221
E1A90_RS03960 NONE
E1A90_RS01690 NONE
E1A90_RS03965  312562 ..  312585 +   -11  -3.27382   TTTTATACATGAAAA          GCCCACCTGT TTCC GTAGGTGGGC           TATATCTTTATTACA  85 266
E1A90_RS03970 NONE
E1A90_RS01705 NONE
E1A90_RS03980 NONE
E1A90_RS03985 NONE
E1A90_RS01710  318097 ..  318107 +    -4  -4.85618   TAAGAATTCTCCTTC                 TCAA ACT TTGA                 TTTTATTAATTGTTT  68 229
E1A90_RS01725 NONE
E1A90_RS03995  319626 ..  319650 +  -2.1  -3.16564   TTCATGAAATAAACG          TGTGTTAGTCA ATA TGAGAAACACG          TTACTACCATAAAGG  42 34
E1A90_RS04000  320803 ..  320817 +  -2.8  -3.03829   TTAATCATTCCATAA               GAATTG AAT CAAGTC               TCATTATTTACCTGG  43 37
E1A90_RS04005  322096 ..  322118 +  -7.7  -2.91276   ACAGCAGCAGGAAAG           GGCGCCAAT TGAAC ATTGGCACC           GTTTATAAGAAGCGA  66 340
E1A90_RS04015  325051 ..  325070 +  -2.8  -3.60971   GCAATTGAATCATTT            TTCCGCTG GATT TAGCTGAA             TTTGAACGTTCCCGT  48 458
E1A90_RS04025 NONE
E1A90_RS04030  327452 ..  327495 + -28.6  -5.77853   TAGATTCATTCTCTA TGCTACGACTCATATGCAAG CTTA CTTGCATATGAGTCGTAGCA TTTTTTTTGGCAGTT 100 42
E1A90_RS04035  328651 ..  328669 +  -8.9  -5.36441   GTCTACAGTCTGCAA             GACCATC ATTTC GATGGTC             TTTTTTATGTCCAAA 100 79
E1A90_RS04040  328993 ..  329010 +  -7.7  -5.29782   GGTTACTAAAAAAGG             GGCACTC ATAA GAGTGTC              TTTTTTCTCAATATA  91 32
E1A90_RS04050  331023 ..  331049 +  -9.5  -5.12068   ACCCCAATTCACATT         GAGAGCACC AATAGCGAG GGTGCTCTC         TTTTTATTGAATCTA 100 376
E1A90_RS04060 NONE
E1A90_RS01760  334368 ..  334381 +  -6.7  -2.96009   TGCGCGATCGATGCA               GCTAG TTCG CTAGC                TATATAAAATTTTTC  61 342
E1A90_RS01770  335557 ..  335583 +  -3.9  -4.32177   GTGCCCCTTTTTTTA         TATCATTTTAT ATTAA ATACAATGATA         TTTATTGTCACATAA  60 75
E1A90_RS01790 NONE
E1A90_RS04070  339328 ..  339360 +  -8.7  -5.49569   ATAAAAATTAAAAAA     TAAGCACATCT-GT TTTTTT ACAAGATGTGCTTA      TTTTTTATGTTAATA 100 37
E1A90_RS04080 NONE
E1A90_RS04085  340797 ..  340826 + -15.3  -3.28712   AGATAGATGAAATAA       GAAAACACCTTAT GCAT ATAAGGTGTTTTC        TTATACAAAAGGGCC 100 39
E1A90_RS01805 NONE
E1A90_RS04095 NONE
E1A90_RS01810  342925 ..  342948 +  -9.6  -3.74693   TAAATCACGAAAAAA          GGTTCTGCTG TTTC CAACAGAACC           TTTCCTAAAATGGCA  82 307
E1A90_RS04100  344028 ..  344043 +  -5.4  -5.80951   TAAGAAGAATTCAAA              GTAGCT TAAC AGCTGC               TTTTTTATTTTGCAT  91 38
        sigI NONE
E1A90_RS04115 NONE
E1A90_RS04120 NONE
E1A90_RS01830  347411 ..  347445 +  -2.3  -3.86392   TTCAAAATAAAAAGT     GCTATTCTTTC CTACGTATTTACA GAGAGAATAGC     GTTTTTTACTTTTAA  50 12
E1A90_RS01840 NONE
E1A90_RS01845 NONE
E1A90_RS01850 NONE
E1A90_RS04135  350384 ..  350397 +  -2.4  -3.72152   TCACGTCGAGTGTCG               TTGC GATTGG GCAA                TTATCATTTTGATTC  49 511
E1A90_RS04145  351080 ..  351108 + -14.1  -5.38054   ATATATAAGGAGAAA        TAGCCATTTACTT GTT AAGTAGATGGCTA        TTTTTGTTTATCCCG 100 33
E1A90_RS01865 NONE
E1A90_RS01870 NONE
E1A90_RS04150 NONE
E1A90_RS04155 NONE
E1A90_RS01875 NONE
E1A90_RS01880 NONE
E1A90_RS04160  354411 ..  354436 +  -7.6   -3.7347   TCAATATAAAAGAAT         GAAGCCCAGT ATATAA ACTGGACTTC          TTCTTACCTGTTCAA  73 32
E1A90_RS01885 NONE
E1A90_RS01890 NONE
E1A90_RS04170 NONE
E1A90_RS01895 NONE
E1A90_RS04175 NONE
E1A90_RS01900 NONE
E1A90_RS01905  356383 ..  356397 +  -4.2  -2.57463   CAAGGATATAAACGA               AGTACG CTT CGTACA               CTTGTAAAAGAAGTT  45 2
E1A90_RS01910  357403 ..  357427 +  -4.3  -2.53581   GATTCTTTTTGCTGA          CAATGGATTTA CTT TCATTCCATTG          TCAGTTACAGCTGTC  48 63
E1A90_RS04190  358597 ..  358607 +  -5.4  -2.75069   CAGTTTTTCTTGGTA                 CGAA TGA TTCG                 GTGTTATTTGATCCA  52 255
        spxA NONE
E1A90_RS04205 NONE
E1A90_RS01925  360108 ..  360120 +  -7.7  -3.00013   AGGAATTTATTTTTT                CATGC TAA GCATG                CTTCTTATATATTTT  67 101
E1A90_RS01930 NONE
E1A90_RS04210  360632 ..  360644 +  -4.9    -3.885   TATTAATCAAGAACG                TTAAG CGG CTTAA                TTATTATGTAGCCGT  60 22
E1A90_RS04215  361284 ..  361307 + -11.8  -5.47846   TGATAATGATGTAAA          TAAGCTGTCC ATAT GGGCAGCTTA           TTTTATTTTTTCGTT 100 213
E1A90_RS04220 NONE
E1A90_RS01950 NONE
E1A90_RS04225  364119 ..  364138 +  -8.6  -5.73339   GAAATTGTTAGCGAA            CCAGTTGC CTAA GTAACTGG             TTTTTTTATGCTTGT 100 39
E1A90_RS04230  364840 ..  364873 + -10.4  -5.30348   AAACAATAGTAAAAA     GGCAAAATCGAACA AGAATA TGTTCGGTCTTGCC      TTTTTATTATTCAGT 100 32
E1A90_RS01960 NONE
E1A90_RS04235 NONE
         gnd NONE
         fsa  368463 ..  368516 +  -2.6  -5.38047   TATAGCTATGAAAAG GAC-CT-CCTTATGAGAGAGAAGTTT ATTA AAACGTAGCTCTCCTAAGGGAGCGTC TTTTTTGTATACATC  74 73
E1A90_RS01975 NONE
        gntK  370092 ..  370105 +  -3.9  -2.64472   ATGAAAGTATAGCAG               CTTTT CAGA AAAAG                TGGGTTTAGAGGCTA  46 3
E1A90_RS01985 NONE
E1A90_RS04255  371345 ..  371390 + -22.3   -3.7104   TTTTTATATACCCCA GAAACAGAAAAAAGCAAAGCG ATAT CGCTTTGCTTTTTTCTATTTC TTCTTCGGTCTACGT 100 57
E1A90_RS04265 NONE
E1A90_RS04270  373152 ..  373176 + -18.7  -5.70829   ACCCAATTATGCGAA          CAGGCAGAGAC TAA GTCTCTGCCTG          TTTTTTTATACTATT 100 12
E1A90_RS04280 NONE
E1A90_RS02005  375611 ..  375636 +  -6.7  -4.68908   ATACATATGAAAAAT         TCGGCCCCAAC ACAT GCTGAGGCCGG          TTTGTTTTGCGTACG  79 188
E1A90_RS02010  376155 ..  376172 +  -4.9  -3.01022   CGCCCCATTCACGGA             TGAAGGA GCAT TCTTTCA              TAATTTCCTCCTTTA  52 155
E1A90_RS02020  379305 ..  379319 +    -5  -3.62224   AACTTTGGAAATAAT               TCTTGA TAT TCAGGA               TTATTACGGAGGTCT  57 482
E1A90_RS04310 NONE
E1A90_RS02030 NONE
E1A90_RS02035 NONE
E1A90_RS04315  382120 ..  382142 + -12.1  -4.77165   CAAGAACAAGAGAAA           GCAGCAACT GTGTA AGTTGCTGC           TTTTCTTCTGACACA 100 11
E1A90_RS04320 NONE
E1A90_RS04325 NONE
E1A90_RS02040 NONE
E1A90_RS04340  385439 ..  385464 +  -9.1  -5.88565   TGAAAAATAAAAAGA         TTCGACTGTCA AATA TGATGGTCGAA          TTTTTTTATTATAGG 100 31
E1A90_RS02055  386483 ..  386504 +  -5.3   -2.8733   CTTAAAAATAATCCA           GCTATCATCA TAA TGAT-ATAGC           CTATTTTGTCCGCGA  53 372
E1A90_RS04350 NONE
E1A90_RS02060 NONE
E1A90_RS04355 NONE
        tsaA  388649 ..  388699 + -15.2  -3.33792   AAGATTATTTTTAAT GCTAATACAAAAAGATTTGCAGTT CAT AATTGCAAATCTTTTTGTATTAAA TATTGTATGCATGGT 100 27
E1A90_RS04370  390106 ..  390118 +  -9.1   -4.3534   TGATTGTTTTATAAA                GCCCT TTT AGGGC                TTTTCCTAATTAGAG  89 51
E1A90_RS04375  391272 ..  391301 + -13.8  -5.08088   GAATACGTAAAAAAA       GAGCTAAAACAG ATAAAA CTGTTTTAGCTC        TTTTTATTAACAATT 100 31
E1A90_RS04385  393828 ..  393846 +   -11   -4.2354   GGATTGGATTTGAGA             GGGAACGT TAA GCGTTCCC             TTATTTTCCGATTTA 100 15
E1A90_RS04390  395006 ..  395020 +  -3.6  -3.38224   CTAGCATTGGTGCTT               TTAGTA GCT TACTAG               TATTTGGAGTAGGAT  50 410
E1A90_RS04400 NONE
E1A90_RS02090 NONE
E1A90_RS04405  397509 ..  397557 + -25.1  -3.65046   GGATTTACAGTGAAA TAAAACAACCTCATTTCGCGTTA TAA TAACGGGAAATGAGGTTGTTTTA TTATGTAATGTTTTT 100 59
E1A90_RS04420 NONE
        mgtE  400933 ..  400955 + -12.8  -5.00467   AGAAATAAGAAGAAG           GGAGGCTGAT TAG ATTAGCCTCC           TTTTATTATTGTTGC 100 333
E1A90_RS04430 NONE
E1A90_RS02105  402619 ..  402629 +  -2.6  -3.96298   TTACTAATGCCTGGC                 TAAA CGC TTTA                 TTTGATTGCTCCATA  53 253
E1A90_RS02110 NONE
E1A90_RS04440  404154 ..  404185 +  -8.9  -5.42131   GTGATAAATGAAAAG      TACTGGTATTCTT AATGGG AAGGATACCGGTA       TTTTTTATGTGGTTC 100 37
E1A90_RS04445 NONE
E1A90_RS04450 NONE
E1A90_RS04455  406218 ..  406237 + -10.8  -5.24989   TAAATATGTGGAAAA            GAGCGAAT GTAG ATTCGCTC             TTTTTTAATGTGTAA 100 38
E1A90_RS04470  407446 ..  407462 +  -2.3  -3.43151   ATAAATATAAGTATG              CTATAAT GTT AATATAG              TTAATTGGTAATTAA  46 65
E1A90_RS04475  408347 ..  408363 +  -3.7  -2.87564   TTTTTTAATATTCGG              TTCGATG ACC CATGGAA              TATATGAAGGAATGA  46 152
E1A90_RS02135 NONE
E1A90_RS04485  410791 ..  410839 + -18.5  -5.50723   AAAAAATTGATAGGG GAGTATGTTGTCATTTGTAGATT GTA AATCTTCATGTGACAACATACTC TTTTTCTTTTGCTAC 100 123
E1A90_RS04490 NONE
E1A90_RS04495 NONE
E1A90_RS02145 NONE
E1A90_RS04510 NONE
E1A90_RS02150  414523 ..  414540 +  -7.1  -3.59882   AGGATGTTTCAGCAT             CTAAGAA TAAT TTCTTAG              TTAATTCTTCTAATT  70 282
E1A90_RS02155  414918 ..  414948 +  -6.2  -3.07043   GTATCATATCCTTTT       GTGGTATTGCTGTT GCC AATGGAAATACCGC       TATTACCATGATCCG  59 66
E1A90_RS02160 NONE
         hfq  416157 ..  416176 +  -2.2  -4.37092   ACATGGTCTTTCCTA            TAAAAAGA ATCT TCTCTTTA             TTTTATGGGAAACAT  57 505
E1A90_RS04525  417931 ..  417953 +  -7.1  -5.76633   AAGAGTTAGAAAAAA          GAGGG-AGAT GCAT ATCTGCCCTC           TTTTTTTGTATATGG 100 47
        ybaK  420235 ..  420267 +  -4.9  -5.65927   AGATAAAGATTTATA      GGATAATTAGTCC ATTATGA GGGCGGATTATCC      TTTTTTATTTACATA  85 79
E1A90_RS04540  420730 ..  420769 + -15.4  -4.11295   GTACAATATGCATTG  TTCCTTCTTCAACTAA AGGGCAGA TTAGTTGAAGAAGGAA   TTTCTCTAAATTTGG 100 196
E1A90_RS04545 NONE
E1A90_RS02185 NONE
E1A90_RS04555  423878 ..  423908 +  -5.6  -5.03945   TTTCTTTAATTAAAA      TAGATTGG-TGCC TTACAT GGTATCCAATCTA       TTTTTGTACTTATTC  76 112
E1A90_RS02195 NONE
E1A90_RS04560 NONE
E1A90_RS02200  425934 ..  425944 +  -3.2  -3.49951   TTGAAAGAGCATTAC                 TTGG AAA CCAG                 TTATCTCCGAGTATG  50 478
E1A90_RS04570  427692 ..  427706 +  -4.2  -5.38047   AGAGTGTCAACCGCA               TACCCT TAA AGGGTC               TTTTTTGTGTGAATG  77 367
E1A90_RS02210 NONE
E1A90_RS02215 NONE
E1A90_RS04580 NONE
E1A90_RS04585 NONE
E1A90_RS04590 NONE
E1A90_RS04595 NONE
E1A90_RS02220  434207 ..  434218 +    -3  -3.30159   TGGTGAAAACCAAAC                CAAT GAGA ATTG                 TTGTGGAAGACTTAC  46 204
E1A90_RS04610  435698 ..  435722 + -12.3  -5.55769   CGTTTGCCTCTTTCA          TGCTTCTTACA TAT TGTAAGGAGCA          TTTTTTATTGTCAAA 100 82
E1A90_RS04625  437340 ..  437354 +  -7.8  -5.45726   TATAAGGCGGGAAAA               GGGAGC TGA GCTCTC               TTTTTTTGAAGTATG 100 17
E1A90_RS04630 NONE
E1A90_RS04635 NONE
E1A90_RS04640  438955 ..  438971 +  -6.6  -4.56914   TTATTATATAAAAAA              GCTAGT ATAAA ACTAGC              TTTTCGTTTAAATAA  79 42
E1A90_RS04660  444325 ..  444342 +  -9.9   -5.1861   TAAGAGCGAGAAAAG             GACCGTA GTGA TACGGTC              TTTTTTCGTAATGAA 100 49
E1A90_RS04665  445422 ..  445465 + -12.6  -4.48221   AACCACTAGTAAACA AAAGGACCGTACATTTTAGA TATG TCTAATATGTACGGTCCTAA TTTTATAACTTCATG 100 76
E1A90_RS04690  449170 ..  449225 + -14.4  -3.33162   AGTTTTCTTGAGCAT TAAACACCATAAAAAAGAAACGAACA TTTT TGTTCGTTTCTTTTTTGGGATGATTA TTATAAAATAGCCTC 100 23
E1A90_RS04710  452894 ..  452915 +  -2.3  -4.41348   TGGTGTACTCAGCGG           TTATACCTT TGGT GAGGTCTAA            TTTGTTTGAAAAAGC  57 489
E1A90_RS04725  454982 ..  455019 + -10.8  -5.08088   TTTGAATGTAAAAAA   AAGGGTCATCATAACT ATGAGA AGTTATGATGACCTTC    TTTTTATTAAGAATT 100 61
E1A90_RS02235  456497 ..  456527 +  -2.6  -2.70213   GAAAAGAAGGGAATA       CCTTATAGATGGGA GTT TACTATTTAAAAGG       CTTAGTATTCTTTGT  40 20
E1A90_RS02240 NONE
        iolG NONE
E1A90_RS02245 NONE
E1A90_RS02250  458632 ..  458650 +  -2.4  -3.61089   ACGGCTGAAAGGTGG             TTTTCTCA TCA TGCGAAGA             TTGTCGTTATTAAGC  48 73
E1A90_RS02255 NONE
E1A90_RS02260 NONE
E1A90_RS04750 NONE
E1A90_RS02265 NONE
        iolD NONE
        iolE NONE
E1A90_RS02280  463614 ..  463638 +  -2.1  -3.46914   GAGATTACATAAGGA          GTAAAAAGACG AAA CGTTTGTTTTC          TATTTAATAAATAAT  46 10
E1A90_RS04765 NONE
E1A90_RS02295 NONE
E1A90_RS04770  465604 ..  465660 + -14.9  -3.37533   GGTATACTTTCCTGT TA-AAAATGTTGTTCGTATAGGAAGC GAATAA GCTTCCTATACGAACAACATTACATA TTAATAATTTTGAGG 100 213
E1A90_RS04775  466147 ..  466167 +  -5.5  -3.79251   AACAAAAGAGGTATT            TGAATGAAA AAA TTTCAATCA            TTTGATGGTACAATA  61 76
E1A90_RS04780  466634 ..  466645 +  -4.4   -3.7511   AAATCATTGTTTTGT                GTCA AAAG TGAC                 TTCTATTCTAAAGGG  56 15
E1A90_RS02310  467064 ..  467078 +  -2.8  -3.20302   GTAAAGTAGACCACA               TATCAG CTT CAGATA               CTTGTTTTATGATAC  44 31
E1A90_RS04790  467397 ..  467430 + -14.3  -2.53715   ATGTTTTTTTAGCCA     TTCAATAATGAATAT GTAC ATATTCATTATTGAA      ATTAGTAATAATAAA 100 136
E1A90_RS02325 NONE
E1A90_RS04800 NONE
E1A90_RS04805  469559 ..  469591 + -17.3  -3.85698   CGAAATAATCCAAGA      CCGAAAAAAATGGGA GTA TCTCATTTTTTTCGG      TTTCTGACAGAAAAC 100 168
E1A90_RS02335  470164 ..  470180 +  -5.1  -2.53876   GGTAATGACTTCTAG              TGCCGTT TCT AACGGAA              TACCTTCCACTAAAA  50 115
E1A90_RS04830 NONE
E1A90_RS02370 NONE
E1A90_RS02375  475910 ..  475921 +    -3  -3.64299   AAAGGTACAATATTT                TTTC TCCT GAAA                 TTAATTTATCATATA  50 167
E1A90_RS04845 NONE
E1A90_RS02380 NONE
         hfq  476969 ..  476984 +    -4  -4.35675   TCAAAGACGGTTTCT              TCTCAT ACCT ATGGGA               TTTTCGTCCGTTTTT  62 361
E1A90_RS02390 NONE
E1A90_RS04860 NONE
E1A90_RS02395 NONE
E1A90_RS04865 NONE
E1A90_RS02400  481930 ..  481942 +  -4.1  -4.07568   TGAATCAGATTTACA                CGGAT TGA ATCTG                TTTTACCCAGAAGGA  58 232
E1A90_RS02405  482687 ..  482699 +  -4.8  -2.79074   AATTCCGAGCTTTTT                CACC GTAAA GGTG                TGATCTCTATTTCCT  51 119
E1A90_RS02410  483437 ..  483450 +  -3.1  -2.96814   TCTAGCAGTTGCATT               TAAGC CAGC GCTTG                CTTGTTCTACTTTTG   0 22
E1A90_RS04875  482476 ..  482501 - -11.1   -3.3514   ATTGAGAGCTCATAA         TCTGCGGGGGAG GGA CACCCCCGC-GA         ATTTAAGTTTCACTT  82 70
E1A90_RS04850  476241 ..  476270 - -11.6  -3.90318   TCAGTACCCCATAAA       GAAAAGACACCC ATATAA GAGTGTCTTTTC        TGATAGTTTTTTTAG  95 37
E1A90_RS04835  475069 ..  475106 -    -5  -4.54553   TATAAAGAGAAGAAA   CTCACACACTTTGA AAAAATCCGA TCAAAATGTGTGGG    TTTTAATTTTGGATT  69 117
E1A90_RS02360  473438 ..  473448 -  -2.6   -2.7083   GATTTCAGAAAGGTA                 TATT AGC AATA                 TCATTGAATTACAAC  41 3
E1A90_RS02355  472931 ..  472947 -  -3.7  -2.63631   GCAAGCCTTACAGGA              GCAACTA GAA CAATTGC              TTGGAGACTATGTTT  45 24
E1A90_RS02345 NONE
        yfcC  471194 ..  471204 -  -3.2  -2.67747   GTTTTATATCAGAAT                 GGAC CAT ATCC                 TATGAAGTGAGCTAT  42 8
        iadA  469864 ..  469890 - -10.2  -4.86731   CTTCTCTAAATAAAA         GACCACTGATTT TTT AAACCGGTGGTC         TTAAGTTTACATACT 100 113
E1A90_RS04810  469429 ..  469449 -  -9.9   -4.0371   TAGTTCTTAGAGAAA            GCATTTTAT CCA ATAAAATGC            TTTCTCTAACTCTGC  90 105
E1A90_RS02330  468681 ..  468691 -  -3.2  -2.83345   GGTACAGAGCAAGGA                 GCAA AAC CTGC                 AATGAAATTTAAAGA  44 158
E1A90_RS04730  454984 ..  455017 - -11.2  -5.86332   TGAATGTAAAAAAAA     GGGTCATCATAACT ATGAGA AGTTATGATGACCT      TCTTTTTATTAAGAA 100 42
E1A90_RS04650  440491 ..  440535 - -27.5  -5.24989   GGATAGATTAAAAAA GTGCACCTCCGATTGTTAGAC TGT GTCTAATAATCGGAGGTGCAC TTTTTTATTTACCTT 100 88
E1A90_RS04645  438955 ..  438971 -  -6.6  -5.39721   TTATTATATAAAAAA              GCTAGT ATAAA ACTAGC              TTTTCGTTTAAATAA  93 33
E1A90_RS04620  436553 ..  436574 - -13.1   -5.0538   TGCCATTTGAAAAAA           CTTCCCATC TTTT GATGGGAAG            TTTTCATTCTTGTTC 100 29
E1A90_RS02205 NONE
E1A90_RS04565  425124 ..  425148 - -15.9  -3.48276   TTTGCTTTGAGAGAA          GGGATTGATCA CTA TGATCAATCCC          TGTTTATATCTATAC 100 113
E1A90_RS02190  422820 ..  422835 -  -3.3  -3.87815   CCGTAGTTCTAGAAA              GTAGA GATTTT TCTAC               AATTTCTAGAGCTTT  55 455
E1A90_RS04530  417931 ..  417953 -  -7.1  -5.30686   AAGAGTTAGAAAAAA          GAGGG-AGAT GCAT ATCTGCCCTC           TTTTTTTGTATATGG  91 140
        tnpA  417357 ..  417367 -  -2.4  -3.74345   ACTTACAGATTGAAA                 GGTG GCA CTCC                 AGCTGCCTATATGAA  48 77
E1A90_RS04515  414236 ..  414263 -   -15  -5.69379   ATATAACGAAAAAAA        CGCTACCCTTTC TATA GAAAGGATAGCG         TTTTTTTATGTCTGT 100 49
E1A90_RS04505  412811 ..  412822 -    -3  -3.75153   GGTTTTTAATTGAAA                TTTG CTCT CAAA                 CACATAATAACCAAT  50 223
E1A90_RS04500  412269 ..  412294 - -14.1  -5.10656   ACGAAAAGAATAAAA         GAGCAGCTAGC AAAA GCTAACTGCTC          CAATCGGTAATATTA 100 52
E1A90_RS02140  409882 ..  409915 - -11.1  -3.98981   AATATTCAATAAGAA     GGTAGATCCTCTGTA TTCA TGCAGAGGATCTACG      TATAGATGGAGGAGA  93 525
E1A90_RS02130  407855 ..  407885 -  -3.5  -2.81316   TCATTAGCGAAGAAG      TTTGATCTGTATAA TGCT TTAT-CTGATCAAA       TTCAAAGTTATTCAC  45 217
E1A90_RS04465 NONE
E1A90_RS04460 NONE
E1A90_RS02120  405510 ..  405527 -  -5.5  -3.25459   ATTAAGTGTACAAGA             GGTAACG GATA CGTTTCC              TACTATTGATATTGT  55 362
E1A90_RS04435  401881 ..  401925 - -11.8  -4.47977   AATAACACAAAATAA TATATTTAGCTGTTTGTAAT TGGTC ATTACAAACAGCTAAAAAAA CGATTGCCTCTTAGG 100 246
E1A90_RS04415 NONE
E1A90_RS04410  397509 ..  397557 - -25.1  -3.71873   GGATTTACAGTGAAA TAAAACAACCTCATTTCGCGTTA TAA TAACGGGAAATGAGGTTGTTTTA TTATGTAATGTTTTT 100 40
E1A90_RS02085 NONE
E1A90_RS02080  393447 ..  393457 -    -4  -3.39664   ATGGAAGAAAAATGA                 GTAA AAG TTAC                 GGAAATGTGATCCCG  51 177
E1A90_RS04380  391091 ..  391115 -  -3.6  -2.68785   CAGAAGGTAAATTTA          TTTCTCCGCA AGTCA TGGGGAAAAA          GTTAGATATTCACCC  45 135
E1A90_RS04365  388662 ..  388686 -  -8.7  -5.09762   ATGCTAATACAAAAA          GATTTGCAGTT CAT AATTGCAAATC          TTTTTGTATTAAATA  95 469
E1A90_RS04345  385437 ..  385466 -  -2.1  -5.65496   TATGAAAAATAAAAA       GATTCGACTGTCA AATA TGATGGTCGAATT        TTTTTATTATAGGTC  74 75
E1A90_RS02050  384377 ..  384388 -  -4.4  -3.27544   TAAAATCATTACGAA                TTGG ATAT CCAA                 ATATATGATGAAATG  52 457
E1A90_RS04335 NONE
E1A90_RS04330  383426 ..  383457 - -10.3  -5.36441   TCCCCATAGAAAAAA      GAGAGGAATCTAT ATTGAA AAAGATTCCTCTC       TTTTTTCTGCGTTAT 100 37
E1A90_RS04305  379188 ..  379198 -  -2.6  -2.90754   CCTAAAATAAAAATT                 TATA ATA TATA                 CAGTATTCATATTTT  42 107
        rfbF  377898 ..  377924 -  -3.6  -3.34344   TGATGTTGCAACTAA         TTCAGCGCAAGC CTT ACTAGCACTGTA         TGGATCATAGCCCCC  50 498
E1A90_RS04290 NONE
E1A90_RS04285  374933 ..  374957 -  -2.1  -3.18728   ATCGCGAATATGGAA          GTTATACGGCT GGA AGACATTTAAC          TATGCATGAGTCTAT  43 241
E1A90_RS04275 NONE
E1A90_RS02000  371933 ..  371943 -    -4  -4.04149   CAATCAGATTATAAA                 TGTA GTA TACA                 TAGAGATCTTAGAGG  58 253
E1A90_RS04260  371358 ..  371377 - -12.2  -5.59879   CAGAAACAGAAAAAA            GCAAAGCG ATAT CGCTTTGC             TTTTTTCTATTTCTT 100 32
E1A90_RS01980  369758 ..  369779 -  -3.8  -2.90219   TATAACTTGTATACA           GTTCTTCT TGCGTT AAAAGAAC            TAATTGGCGAACCGA  47 133
E1A90_RS01970  366400 ..  366415 -  -6.2    -4.946   ATTAAATAGTAAAAA              TCCATT GAAC AATGGA               GAGCTAGAACCGATC  80 503
E1A90_RS01945  361969 ..  361981 -  -4.9  -2.93995   GAGAAACCATTAAAG                TAACA CAC TGTTA                TTAGAAATGTTGCAA  51 315
E1A90_RS01935  361284 ..  361307 -  -9.6  -3.72984   TGATAATGATGTAAA          TAAGCTGTCC ATAT GGGCAGCTTA           TTTTATTTTTTCGTT  82 91
E1A90_RS01920 NONE
         hfq NONE
E1A90_RS04165  354407 ..  354439 -  -7.9   -4.6821   AATTTCAATATAAAA     GAATGAAGCCCAGT ATATAA ACTGGACTTC-TTC      TTACCTGTTCAACAC  84 26
E1A90_RS01860 NONE
E1A90_RS04140  349957 ..  350004 - -15.2  -2.90194   ATTTTTCTAATTATA TCTTTTTAGATTGATGGATGTG GGGT CACGTCCATCAATCTAAGAAAA CAAGTTAGCCTAAAG 100 112
E1A90_RS04125  347236 ..  347246 -    -4  -3.80858   CGACAATGTATGAAA                 CATT ACA AATG                 CCTCAAAGTACAATT  54 320
E1A90_RS04105  344066 ..  344083 -  -4.8  -4.96848   TTTTGCATAGAAAAA             GGAACC ATAATA GGCTCC              TTAATTTGATTCAGA  75 26
E1A90_RS04090  341046 ..  341075 - -10.8   -5.1634   ACAAATATAGAAAAA       GGTGCGAAGTCA ATTCTA TGACTTTGCACC        TTTTTATTTCACTTG 100 73
E1A90_RS01785 NONE
E1A90_RS01780  336677 ..  336695 -  -7.5  -3.52515   AGTGAAAATGGAGAA             GTGAAAG ATCAG CTTTCAC             TTGGGGAAAAATTCC  71 464
E1A90_RS01775  335323 ..  335341 -  -5.4  -3.19602   TTCGCCATATTAACA             TGTAACTT ATT AAATTACA             AAGAAAAAAATTAAA  56 443
E1A90_RS04065  333652 ..  333695 - -15.6  -3.40522   ATTTTTGCACCAGAA CCATATAAAAAGAGGACGAA TAGT TACGTCTTCTTTTTATATGG TTATATTAGCTACAA 100 73
E1A90_RS04055  331250 ..  331267 -  -2.7  -4.75404   AAAGTTGATGAAAAA             CCATATA AAAG TAAATGG              AAAACTCCTTCAAAC  63 55
E1A90_RS04010  322400 ..  322451 - -10.5  -3.07935   AGTTGAGTTATGTAA TTCCCATCTTAATGAAGAATTAT TGAAAT ATATTTCTCCATTAGAATGGGAA CACATTAATATTCTA  83 404
E1A90_RS01735  319783 ..  319803 -  -6.9  -2.64912   TGGTGAAGTGATAAG            TCACGCA CAGCGAT TGCGTGA            AGTTGTTGAAGAAAT  60 109
E1A90_RS01720  318359 ..  318369 -    -4  -2.53876   TTGGAGGTTAAGGTA                 TGTT TAA AACA                 GAGACAAATATAGAA  45 472
E1A90_RS03990  317182 ..  317206 - -12.3  -3.16323   AAAAGGCGCGATTAA          GGCTAACAATC TTG AATTGTTAGCC          TTTTTTTACATAAGT  90 319
E1A90_RS03975  314921 ..  314946 -  -9.1  -5.09762   ACTCTAATATAAAAA         GACATGAACAA AGAT TAGTTCATGTC          TTTTTTTGTGTTGGC 100 163
E1A90_RS03930  305035 ..  305070 - -13.5  -3.36452   ATTGGTGAAGACTAA    TAATCAGTGGGGG ACGAACAAAA CCCCCACTGATTA     AAGTTTCATTTTATC 100 448
E1A90_RS03920  304662 ..  304696 - -10.3  -3.40694   AAATAGAGAGAAAAG     GAAAACACTTCAT TTTTTATCG ATGAAGTGTTTTC     ATAGTTTAAGTTAAT  85 36
E1A90_RS01650  301896 ..  301907 -  -4.4  -3.38951   GCATGAACATATGAA                CATG TATT CATG                 TGTTTGTGAGAAGGA  54 489
E1A90_RS03890 NONE
E1A90_RS03885 NONE
E1A90_RS03880  298871 ..  298894 -  -7.4  -4.87328   TATATAAATAGAAAA          GTCATGGGCC AAGT AGCTCATGAC           TTTTTCTATTAAATA  86 3
E1A90_RS01630 NONE
E1A90_RS01625  296151 ..  296162 -  -4.4  -2.70419   ATCAAATTGAAATAT                CAGA AGGG TCTG                 TTTATCCTTTACTTC  47 437
E1A90_RS03855  294665 ..  294713 -   -15  -4.56702   TTTCAAGTAAATAAA GATAGTAAAAAGTCCGATTTCT CGTTT AGAAATCGGACTTTTTATTATT AAAATTTCTCTACAA 100 24
E1A90_RS01605  292904 ..  292927 - -10.4  -3.90358   ATATGATATATGAAA          CCGAGGTAGAT AGG ATCT-CCTCGG          TTATTTATATTGTAA  89 484
E1A90_RS01585  290224 ..  290255 -  -3.8  -3.78597   ATCCATTAATTCAAA      CCATC-CCTAATTAT TCC ATAAAAAGGTGATGG      TATCAAGTTATCCTT  56 178
E1A90_RS03835  289540 ..  289552 -  -9.1  -4.02348   GATATAAAAGAAAGA                GGGGA GCT TCCCC                TTTCTTTTATGTAAA  85 48
E1A90_RS01565 NONE
E1A90_RS03820  287495 ..  287516 - -10.1  -5.03994   TCTTACATAGAAAAA           GCGCCGTCA CTTG TGATGGCGC            TTTTTGTATTAAAGA 100 78
E1A90_RS01555  286353 ..  286363 -  -2.4  -2.50761   ATTATTAGGAAAAGT                 GGGC GTT GTCC                 TCTAATATAGAGATA  40 2
E1A90_RS01550 NONE
E1A90_RS03805  284622 ..  284646 - -11.5  -5.14563   TTGGTGATGAAAAAA          GGTTTGTAGCA TAG TGCTGCAAACC          TTTTTTATTTGACGA 100 64
E1A90_RS01530  282525 ..  282537 -  -7.7  -2.58418   GGTGTAGAGAAAATT                GATGG AAA CCATC                CTTTCGAAGTAATTT  64 72
E1A90_RS03770 NONE
E1A90_RS03765 NONE
        tnpA  278163 ..  278183 -  -9.8  -5.01732   AATTGCTTGAAAAAA            CGAAATCC CAGAT GGATTTCG            TTTTTTTGTAATTAG 100 44
E1A90_RS01495  275937 ..  275957 -  -5.5   -4.3898   ATTATTTCGATAAAA            TCAATCG GAAATAT CGATTGA            AAAGAGGGATGATAA  69 363
E1A90_RS03745  274836 ..  274874 -   -25  -4.33928   TATCTCAAATAGAAA   TAAGAAAGGGAAGCTAGA AAA TCTAGCTTCCCTTTCTTA   TTTTGTAAATTATGG 100 35
E1A90_RS03720  268401 ..  268422 -  -7.2  -5.61881   GCTGAAAAATAAAAA           GCCTTGCC GAGAAT GGCGAGGC            TTTAAAAGTTATAAT 100 34
E1A90_RS01420  259350 ..  259372 -    -7  -3.98236   AAATTCCATGATAAA           TCTACAATCG TAA CGATGGCAGA           AGATGACTTGGCTGA  71 30
E1A90_RS03670  256587 ..  256610 -  -5.4  -3.99986   TGAAGAAAATCTAAA          GAAATGTC GTGGGAGT GACATTTC           TTTTTTAATATGTTG  64 70
E1A90_RS03660 NONE
E1A90_RS01400 NONE
E1A90_RS03655 NONE
E1A90_RS03650  253511 ..  253567 -   -10  -3.95435   TTGTCTAAAATATAA TAAGAAATAATGT-GAAAAAACTGTTT AAAT AAGCAGTTTTTTTTACATTATTCCTTA ATTCCAGTTTGGATG  87 23
E1A90_RS03615 NONE
E1A90_RS01355 NONE
E1A90_RS03610  246969 ..  247005 - -18.5  -3.79747   CTATTTAGCAGCAAA    TAATAAAACTCCATTTT AAA AAAATGGAGTTTTATTA    TTATTTGATTTTTAC 100 26
E1A90_RS03605  245216 ..  245253 - -17.4  -4.91459   CAAGATGGAGAAAAA   GTAGAAAAGGTGTTTT TATACG AAAACACCTTTTCTAC    TTATAATGTTCCTTT 100 134
E1A90_RS01335  244016 ..  244030 -  -3.6  -3.70902   GTGGCTATATGCAAA               TCAAAA CCT TTCTGA               ATTAGCTATCCGTCA  54 512
E1A90_RS01315 NONE
E1A90_RS03565  238662 ..  238683 - -10.1  -5.16572   AGTGAAGTGAAAAAA           GGGTCGCCA TGAA TGGCGACCT            TTTTTGTTATGCGTT 100 32
E1A90_RS03550  233986 ..  234013 - -14.3  -3.01125   ACGCGGGATAAAGGA        GCCAGAAAGTG TTTAAT CACTTTCTGGC         TTGTTTTTGATTATT 100 40
E1A90_RS01270  231548 ..  231563 -  -3.4  -3.68359   TTTTCAAAACTATAA              TTTATT TAAA AATAAA               ACAGCATTGCAAAAT  52 514
E1A90_RS01250  228957 ..  228976 -  -2.1  -2.72012   AATGATCACATATGA            GAAAGCG GTATTG CGGTTTC             TGAAGCATGCAGGTG  40 517
E1A90_RS03515  228428 ..  228456 - -19.1  -2.52543   ACTTTCGTCAATTTA        TATAAGGAAGGGG GAG CCCCTTCCTTATA        TATTTGTTATTTTCG 100 44
E1A90_RS03510  227166 ..  227185 - -10.8  -5.42164   TATAAAGAAGAAAAA            CCGATTCT TAGT AGAATCGG             TTTTTAGTATAAATG 100 108
E1A90_RS01210 NONE
E1A90_RS01205  217143 ..  217161 -  -8.2  -4.18494   GATTCTTATTCAAAA             TACAGGAA CTG TTCCTGCA             ACAAATATTATTTTT  81 494
E1A90_RS03455  212771 ..  212791 - -15.5  -4.58724   GAAATAGAATGAAAA            GGCACGCTA TTA TAGCGTGCC            TCTTTGTTATTCATC 100 32
E1A90_RS01185  212117 ..  212134 -  -2.7  -4.95302   TCAAACAGAAGAAAA             GAAACAA ATAA TTGTTGC              TACGTCTGAGATTTC  68 126
E1A90_RS01170  209206 ..  209221 -  -4.8  -3.11634   GCTGATATCAGGTAA              CTTTTT AGTG AAAAAG               GTGTGGAGTTCAAAT  53 421
E1A90_RS01150 NONE
        dhaS  204455 ..  204479 - -14.4  -4.55544   AATACATAATGAAAA          GAACCTGACC GAGTA GGTCAGGTTC          TTTCTCGTTAATTTA 100 33
E1A90_RS01140 NONE
E1A90_RS01135  203662 ..  203672 -  -2.6  -3.65693   AGCATAGAGCCGAAA                 TATA CAA TATA                 ACTAATAGAAATGGG  48 96
E1A90_RS03410 NONE
E1A90_RS01125  202845 ..  202859 -  -4.3   -3.3782   TATGCACCGAATGAA               TTGCT TGAAG AGCAA               AAAAAGAAAGCTATC  54 325
E1A90_RS01100 NONE
E1A90_RS01095  197916 ..  197953 - -18.9  -3.32997   CTGTGATAAATTCAA   TCAATCTTCTAAAAACA AGCT TGTTTTTAGAAGATTGA    TTTTTCTGATTTTAA 100 466
E1A90_RS01090  197263 ..  197275 -  -4.9  -3.46525   AGAAAGAGAAAGAGA                TGTTT ATG AAACA                ATTGTGGGATCGTTC  56 185
E1A90_RS01085  196476 ..  196496 -  -5.5  -4.20868   TCTTTAAAACAAGAA            TTGCAAGAA GAG TTATTGCAA            GAAATGTTTAAAGAA  66 379
E1A90_RS01070  192960 ..  192976 -  -4.5  -2.68071   TTGAAGCGAAACCTA              CTGAATT ACC AATTCAA              ACTTCTTATTTCGAA  48 30
E1A90_RS01065 NONE
E1A90_RS03360 NONE
E1A90_RS01060 NONE
        pseC NONE
E1A90_RS01045 NONE
        pseG NONE
        pseH NONE
        pseI  184237 ..  184254 -  -4.1  -3.37523   AACAGTAAACCAAGA             GATTCCA ACGA TGGATTC              TTCTAAATCAACAGA  51 382
E1A90_RS01000  180566 ..  180581 -  -3.4  -4.35189   AACTTAAATAAAGAA              TTATTT TTGA AAATAA               ATGTAGTTGGAGGGC  61 33
E1A90_RS03300 NONE
E1A90_RS00985  175638 ..  175679 -  -9.7  -3.89215   TCTCATAAAGTGAAA CT-TTAATCAGTGGGGAT TTTCTTT ATCCCCACTGATTATTAG TTGAACCAATCGGGC  83 479
E1A90_RS00975  174383 ..  174393 -  -6.8  -3.42241   AACATATAGTGATAA                 TCGC CGT GCGA                 TAATTGAAGAGGAAA  65 89
E1A90_RS00970  173689 ..  173715 -  -7.3  -3.60006   AAGCAGAGGTTGAAA         CGATTCGTGGC GGGAA GCAACAAATCG         TTATTACAGAAATTC  70 280
E1A90_RS00960  169472 ..  169483 -  -4.4  -3.33744   GTGCGGGTGAAAAAG                CGAT TGCA ATCG                 GTAACCCACTAGGGT  53 490
E1A90_RS00945  168814 ..  168824 -  -5.4  -2.98813   AGTTCACAAGAAGGA                 CACA AAA TGTG                 ACTATACTGAAAGTA  54 34
E1A90_RS00935  166691 ..  166706 -  -3.2  -4.17316   AGTGGTTCAAAAGAA              GCGTTT TTTG AAGCGC               TAAGTTATTATTTAG  57 316
        plsY NONE
E1A90_RS03250  164423 ..  164440 - -12.7  -5.61596   AGCGGGATAAAAAAA             GCGTGGC AGAA GCCACGC              TTTTTTATTTTTCAT 100 30
E1A90_RS00925  163280 ..  163294 -  -2.8  -4.17762   CATCGCGTAAAATAA               CCGA GGTCAGA TCGG               CACTGAAATTTCCAT  55 55
E1A90_RS00915 NONE
E1A90_RS00910  159853 ..  159869 -    -3  -3.05463   ATCGCTTTCATTTAA              TCCAGT TTTTC ACTGAA              GCATTACGTAGACGC  45 95
E1A90_RS00905  159065 ..  159081 -  -5.2  -2.72463   ATTTATTTCTAATTA              TATGGT TCATC ACCATA              ACTTGGGGTTGAATT  52 519
E1A90_RS03200  157186 ..  157211 -  -7.7  -5.17744   AGATACTAATAAAAA         GATAAGAGCTAC ATA GC-GCTCTTATC         TTTATTCACTCTTAT  93 27
E1A90_RS00875 NONE
E1A90_RS00860  153812 ..  153824 -  -2.6  -2.91199   CAATTGGTAAGCACA                CGCC AGCTG GACG                TTATTTACTAGAAAA  42 188
E1A90_RS00855  153020 ..  153053 -  -2.5  -4.37013   AAGTAACGATGAAAA     CAG-GTGGAATTGCAA TCG CTGCAATTACAAGCTG     TACAAATACGTCAAA  60 460
E1A90_RS00845  152257 ..  152269 -  -4.1  -3.17051   GTTCCACCAGCAACA                GGTAT TGT ACACC                AAGTAAATCTTGAAT  48 20
E1A90_RS00840  151588 ..  151605 -  -4.9  -5.13648   GAAAGATAAAGAAAA             CTTATGA TAAT CCATAAG              TTTCTTATTATTTAC  79 307
E1A90_RS03180  151245 ..  151281 - -14.8  -2.90065   ACGTTATAAACATTA   GAGAAAATCCCAAAAGG TATA CCTTTTGGGATTTT-TC    GTTACTGATTCTTTT 100 27
E1A90_RS00830 NONE
E1A90_RS03165  149900 ..  149910 -  -2.6  -4.23487   ACAAATAGAAAAATA                 TAAA CAT TTTA                 TGTGAAAGATACAGT  55 60
E1A90_RS03160 NONE
E1A90_RS00825  148732 ..  148742 -  -3.2  -2.96964   AAAAGAAAGTAACTA                 CAGA AAA TCCG                 GTCACAATGTTAAGT  45 273
E1A90_RS03145  146283 ..  146318 - -12.8  -3.88832   ACGAAGTAGAAAAGA    GAAGTGGATGTCAC ACAGTTCA ATGACATCCACTTC     ATAAAATAATCTACA 100 36
E1A90_RS00800 NONE
E1A90_RS00795  141553 ..  141565 -  -5.5  -4.10161   TATGAGTTTTTAAAA                CCGCA GTT TGCGA                AGTGGTGGTTACCAG  65 169
E1A90_RS00790 NONE
E1A90_RS00785 NONE
E1A90_RS00780 NONE
E1A90_RS00775  138074 ..  138084 -    -4   -4.2717   ACTATTTGATCAAAA                 CTTT CTA AAAG                 AATTGACAAAAAGAT  61 97
E1A90_RS00770  137334 ..  137355 -  -7.4  -4.48987   GGTTCATAACGAAAA           CTCCTTTA AATGAA TAAAGGAG            TTTTTTTGGTTTTTT  79 340
E1A90_RS03090 NONE
E1A90_RS03085  135550 ..  135577 - -14.4   -3.6501   AAGAATGAGGGTAAA        TAAAAAAGAGCC AGAT GGCTCTTTTTTA         TTTGTTTTCTTTATG 100 23
E1A90_RS00745  133718 ..  133731 -  -6.7  -3.47475   ACAAAGTTAATAATA               CCTGT GTTT ACAGG                GGTTACAATCCCTAA  65 435
E1A90_RS00735 NONE
E1A90_RS03050  130781 ..  130807 -  -6.6  -5.16969   TATACAAAAAATAAA         GCTCAGAGTC ATATAGG GACTTTGAGC         TTTTTAACGTATTAG  88 109
E1A90_RS00725 NONE
E1A90_RS00720  129719 ..  129731 -  -2.7  -3.97308   ATTAGAAAATGCAAA                TGCTA ATG TAACA                ATACATTGGGAAAAT  52 85
E1A90_RS00685  123398 ..  123415 -  -4.7  -2.81133   TATGGACGTACTAGA             CCAAGCG TTTG CGCCAGG              CTGTCCAGCAATTGG  51 355
E1A90_RS00660  119942 ..  119953 -  -4.4   -4.7497   TTGATTCATTAAAAA                CGTT AGAA AACG                 ATGAAACGTTACTTG  71 482
E1A90_RS00650  119482 ..  119500 -  -7.5  -4.26079   TCAAATTATTCAAAA             TGCAAGA CGCGT TCTTGCA             ATTGAGATGATCTGT  80 5
E1A90_RS02990  116491 ..  116506 -    -9  -4.19276   GGAAAACGTGTAAAA              GCTAGC GAAT GCTAGC               TCTTTTCTTTTTACA  88 11
E1A90_RS00625  115168 ..  115213 - -18.7  -2.98907   TAAGAAAAGGGAAAG CAAAAAATAATGTAAGCTTGG ATTT CCAAGCTTACATTATTTTGCG TCCGTCATAATCTCT 100 325
E1A90_RS02970  114761 ..  114783 - -12.8  -3.95007   CATAGAAAGCAAGAA           CGCTTGATCA TTT TGACCAAGCG           TTGTGATTTAAACGA 100 33
E1A90_RS02965  114207 ..  114227 - -11.3  -5.26316   TGAGCTTATAAAAAA            GATTGCTAT AAA ATAGCAATC            TTTTTTATAAGGAAT 100 48
E1A90_RS00615 NONE
E1A90_RS02945  110961 ..  110988 - -13.6  -4.97957   TATACAATAATAAAA        GAGAGGATTCTC AAAT GAAAATCCTCTC         TCGTTTTATGCTGCA 100 31
E1A90_RS00595 NONE
E1A90_RS02940  109730 ..  109752 - -12.1  -4.51777   ACAGCATAAGCAAAA           GCCGTTAAG GGTAA CTTAACGGC           TTTTTGTTTGTAATA 100 18
         hfq  108364 ..  108374 -  -5.4  -2.53409   GACGAACCGACGAAC                 GGAT TAG ATCC                 TAGTGGTATACATGA  51 58
E1A90_RS00575  107435 ..  107461 -  -7.5  -3.74012   CATATAAAATGACAA        CCTCTCTT-TTA CGGG TAAGAAGAGAGG         AGTTTAAATCGTATG  73 478
E1A90_RS00560  106557 ..  106578 -  -5.9  -2.54896   TGTTTACCGAAGGCA           CATCCTCTT GCTG AAAAGGACG            AAATACATATCGAAG  54 125
E1A90_RS02915 NONE
E1A90_RS02910  104826 ..  104845 -    -5  -5.65927   TATGTAAATAAAAAA            GCAAGTGT GTAA ATACTTGC             TTTTTTAGTGTATCC  88 30
E1A90_RS00520  102397 ..  102416 -  -2.2  -4.13748   TTCAAAAATATTAAA            GGTAAT TTAGTTCC ATTACC             ATTTACGGATCAAAA  53 10
E1A90_RS00510 NONE
E1A90_RS00505  101351 ..  101365 -  -3.6  -3.69354   TGTTACAACCGCAAA               CAATTA TTG CAATTG               GACAAGTTGGAGAGT  54 4
E1A90_RS00495   98815 ..   98838 -  -2.6  -4.72272   GCCTTTTATTAAAAA          TATATAATTT TTAC AAAGTATATA           TTGATAGCATAGTAT  60 14
E1A90_RS00490   98383 ..   98405 -  -5.5  -2.77895   TCCACGCCTAATAAT           GCGACTCCA GTATA CGGAGTTGC           TGTAATTAATGGAGA  52 250
E1A90_RS00485   97923 ..   97943 -  -4.8  -2.62515   AATTGGTGCATATCA            TTTTGCTC ATCCA GAACAAAA            TGATGCAATTTCAGA  50 52
E1A90_RS00480 NONE
E1A90_RS00475   96518 ..   96528 -  -2.6  -3.77953   TGAAGAAGTGAACAA                 TAAA CAT TTTA                 GTGCTGGACGTCGTA  51 436
E1A90_RS00465   95506 ..   95518 -  -4.1  -4.63527   TCAGGAGGTCAAAAA                CAGAG AAT CTCTA                TTGCGCGTGCATTAT  65 133
E1A90_RS00450 NONE
E1A90_RS00445   93809 ..   93837 -  -2.5  -3.24232   TTGCCCGCAAATACA        TGATGAATTACTT ACA AAAAAATCCACCA        ATTAACGAACAAATG  45 33
E1A90_RS00440   93479 ..   93489 -  -5.4  -4.10791   AATACGGAGAAATAA                 TGGT GAA ACCA                 CAATATATTCGAATA  65 66
E1A90_RS00435   93063 ..   93081 -  -7.4  -4.86001   ATGATTTTAGAAAAA             TCTCTCCA GCA TGGGGAGA             TTTTTCTATGTAATT  86 9
E1A90_RS00430   92585 ..   92601 -  -3.7   -5.2204   TAGAATCAACAAAAA              CACCAAC TGC ATTAGTG              TTAACTCGTCAAGAT  74 63
E1A90_RS00400 NONE
        splB   87197 ..   87213 -  -3.8  -3.34344   TTATCTTTCAATTAA              TCATAT CAAAT ATATGA              AAAGAATTTTAATGT  49 27
E1A90_RS02820   85540 ..   85556 - -12.3  -4.65819   AAAATTAAATTAAAA              GATGGGC ATA GCCCATC              TTTTTTATTTGTTAA 100 46
E1A90_RS00360 NONE
E1A90_RS00355 NONE
E1A90_RS00350   79290 ..   79302 -  -3.4   -5.1286   CAAAAATTAGAAAAA                GTAG AAAAA CTAC                TTTTAGAGCAAGGAT  73 230
E1A90_RS00335   76289 ..   76322 -  -9.7  -3.57185   TTCAGGGAAACAAGA     TGCAAATTCCGCAAT AATT AATCCGGAATTTGCA      AGGGAAATGAATGTT  82 106
E1A90_RS00320   72411 ..   72427 -  -2.3   -5.0916   GTGGGAATATAAAAA              CAATC GTTCCTA GATTG              CGTATAGAGACACGA  65 347
E1A90_RS00305   69374 ..   69384 -    -4  -5.04597   ACTTATATAGAAAAA                 TGTA ATT TACA                 TGATTGCCGTAGACA  72 173
E1A90_RS00295 NONE
E1A90_RS00290   67535 ..   67565 -  -5.6   -3.6372   AAAATACAACTACAA       TTTTTAGAGAAACC ACA GGTTTATTTAAAAA       AGGGAAGTATAGACC  59 102
        mmuP NONE
        mmuM   64500 ..   64522 -  -2.1  -2.69906   GGAATAAAATAAATC           CCTATACAA AAATG TTATATAGA           AAAGTTTTATCACAT  40 34
E1A90_RS00270   64113 ..   64133 -  -3.4  -5.50313   TATAAAACTAAAAAA            TCTTTTAC TATTT ATAAAAGA            TACTTGGGGGAATTA  76 188
E1A90_RS00260   63217 ..   63238 -  -2.3  -3.08679   CTTCGTCATTCAATA           TGGATGGAGA ATA TCTCT-TCCA           TTTCTTCCAAAGTTG  42 93
E1A90_RS00250   61458 ..   61468 -    -4  -3.66398   ATTTACAGATAAAGA                 TCAA AAG TTGA                 TTTATTATGCAGTTC  53 202
E1A90_RS00235   54549 ..   54577 -  -6.7  -2.92653   GTATAATTGTACATA        CCGCTCCAAGATC GAA AATTTCGGAGCAG        TATCGTTCGCTTCGA  61 306
E1A90_RS00230   52999 ..   53015 -  -5.1  -3.45945   GTGATTTACAATTAA              GTGATGA TGC TCGTCAC              TTCATCGCAGGTATT  56 402
E1A90_RS00210   51653 ..   51664 -    -3  -5.67063   GCCATTAGAAAAAAA                TGAA AAAA TTCA                 CAAAAAATCATGTAA  77 94
E1A90_RS02650   48306 ..   48328 - -10.7  -5.54907   GTTAGAAAAGAAAAA           CCTCTTTAC GATAT GTAAAGAGG           TTAGATTGCTATTTA 100 34
E1A90_RS02640   46030 ..   46046 -  -6.5  -6.32976   AAAAAAATAAAAAAA              CGCCTTA TTA TAGGGCG              TTTTTTTTATTTTCA 100 16
E1A90_RS02635 NONE
E1A90_RS00175   41258 ..   41270 -  -4.9  -3.84406   GGTTTATTAGAAGAA                GTAAA AGG TTTAC                ATGAAAGAGGAGTGC  61 371
E1A90_RS02620   40109 ..   40136 - -10.6  -5.83211   TATTAAAATAAAAAA        CGGCTGCTTAAA AATG TCTAAGCGGCCG         CTTTTTTTATATAAG 100 43
E1A90_RS00165   38883 ..   38901 -  -3.2  -2.80479   TGTAATGAAAAGTGA             TTTTTTTG TAA CAAAAAAG             TAATACTGTAATTTT  43 128
E1A90_RS00160 NONE
E1A90_RS00155   36962 ..   36993 -  -8.2  -3.22774   TACAGTTATTATGAA      CT-TGACAGCTTC AAATAAA GAAGCTGTCATAG      ATGAATTAGTTGAGA  71 201
        xerS   33994 ..   34004 -  -3.2  -4.69664   TAGAGCAGTTAAAAA                 CGGA AAT TCCA                 CAGTTCGGTAAAAAA  64 509
E1A90_RS02570   29689 ..   29718 - -10.2  -5.76237   TACATAAATAAAAAA       CAACAATAGGTC ATATAA AACCTATTGTTG        TTTTTTATTATTTTT 100 33
E1A90_RS02555   25984 ..   26009 - -14.9  -5.52986   ATGTCATGAAAAAAA         TAGCCTTCTCA TAAA TGAGAAGGCTA          TTTTTCATTATTTTA 100 446
E1A90_RS00095   22380 ..   22416 - -15.4  -3.08032   CGTTTTTCAAAAGCA    TAAAAGCCAAGCTAGT ATTTG ACTAGCTTGGCTTTTG    TTTATATAGGAGAAG 100 416
E1A90_RS00060   13811 ..   13836 -  -3.3   -3.1876   AAGGCTACTCAGGAA         CGGCTATTTTC ACGA AAAAAGAACCG          ATTTCTGTTACATAT  48 107
E1A90_RS02480 NONE
E1A90_RS00055 NONE
E1A90_RS02475 NONE
E1A90_RS02470   11426 ..   11439 -  -3.1  -5.92337   ATATATTAAAAAAAA               GCACT TAAA AATGC                TTTTTTTAATATAGA  85 31
E1A90_RS00030 NONE
E1A90_RS00025 NONE
E1A90_RS00020 NONE
E1A90_RS02435    3430 ..    3448 -  -2.5  -2.72829   TATAGTTGTTCAAAT             TCATTAT TACCT ATAACGA             TTACATTCCGTATAG  40 62
E1A90_RS00015    2499 ..    2518 -  -5.1  -2.65126   GAGAACTTTAAAGAT            CCTTTTA AAATTA TAAAAGG             CTGCTTACAAAGTTA  50 294
