locus-tag class description LMD38_RS00005 PF04542 Sigma-70 region 2 LMD38_RS00005 PF08281 Sigma-70, region 4 LMD38_RS00025 PF02225 PA domain LMD38_RS00025 PF04389 Peptidase family M28 LMD38_RS00035 PF00557 Metallopeptidase family M24 LMD38_RS00040 PF00005 ABC transporter LMD38_RS00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS00050 PF07730 Histidine kinase LMD38_RS00055 PF00196 Bacterial regulatory proteins, luxR family LMD38_RS00055 PF00072 Response regulator receiver domain LMD38_RS00075 PF03707 Bacterial signalling protein N terminal repeat LMD38_RS00075 PF00563 EAL domain LMD38_RS00075 PF00990 Diguanylate cyclase, GGDEF domain LMD38_RS00080 PF03851 UV-endonuclease UvdE LMD38_RS00085 PF13091 PLD-like domain LMD38_RS00090 PF13183 4Fe-4S dicluster domain LMD38_RS00090 PF02754 Cysteine-rich domain LMD38_RS00100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LMD38_RS00100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LMD38_RS00105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMD38_RS00105 PF02770 Acyl-CoA dehydrogenase, middle domain LMD38_RS00105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LMD38_RS00110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMD38_RS00110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LMD38_RS00110 PF02770 Acyl-CoA dehydrogenase, middle domain LMD38_RS00120 PF05066 HB1, ASXL, restriction endonuclease HTH domain LMD38_RS00125 PF00117 Glutamine amidotransferase class-I LMD38_RS00125 PF06418 CTP synthase N-terminus LMD38_RS00130 PF01556 DnaJ C terminal domain LMD38_RS00130 PF00226 DnaJ domain LMD38_RS00130 PF00684 DnaJ central domain LMD38_RS00135 PF10740 Domain of unknown function (DUF2529) LMD38_RS00140 PF00072 Response regulator receiver domain LMD38_RS00145 PF01116 Fructose-bisphosphate aldolase class-II LMD38_RS00150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LMD38_RS00155 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LMD38_RS00160 PF07497 Rho termination factor, RNA-binding domain LMD38_RS00160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMD38_RS00160 PF07498 Rho termination factor, N-terminal domain LMD38_RS00170 PF01197 Ribosomal protein L31 LMD38_RS00175 PF00265 Thymidine kinase LMD38_RS00180 PF00472 RF-1 domain LMD38_RS00180 PF03462 PCRF domain LMD38_RS00185 PF13847 Methyltransferase domain LMD38_RS00185 PF17827 PrmC N-terminal domain LMD38_RS00190 PF09551 Stage II sporulation protein R (spore_II_R) LMD38_RS00200 PF03481 Putative GTP-binding controlling metal-binding LMD38_RS00200 PF01300 Telomere recombination LMD38_RS00205 PF02659 Putative manganese efflux pump LMD38_RS00220 PF01613 Flavin reductase like domain LMD38_RS00225 PF07681 DoxX LMD38_RS00230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LMD38_RS00235 PF01451 Low molecular weight phosphotyrosine protein phosphatase LMD38_RS00240 PF02502 Ribose/Galactose Isomerase LMD38_RS00245 PF04260 Protein of unknown function (DUF436) LMD38_RS00250 PF00464 Serine hydroxymethyltransferase LMD38_RS00270 PF03899 ATP synthase I chain LMD38_RS00275 PF00119 ATP synthase A chain LMD38_RS00280 PF00137 ATP synthase subunit C LMD38_RS00285 PF00430 ATP synthase B/B' CF(0) LMD38_RS00290 PF00213 ATP synthase delta (OSCP) subunit LMD38_RS00295 PF00306 ATP synthase alpha/beta chain, C terminal domain LMD38_RS00295 PF02874 ATP synthase alpha/beta family, beta-barrel domain LMD38_RS00295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMD38_RS00300 PF00231 ATP synthase LMD38_RS00305 PF02874 ATP synthase alpha/beta family, beta-barrel domain LMD38_RS00305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMD38_RS00310 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LMD38_RS00310 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LMD38_RS00325 PF00990 Diguanylate cyclase, GGDEF domain LMD38_RS00325 PF03707 Bacterial signalling protein N terminal repeat LMD38_RS00325 PF00563 EAL domain LMD38_RS00330 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LMD38_RS00335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LMD38_RS00340 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LMD38_RS00345 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LMD38_RS00350 PF00146 NADH dehydrogenase LMD38_RS00360 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LMD38_RS00365 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LMD38_RS00370 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus LMD38_RS00370 PF00361 Proton-conducting membrane transporter LMD38_RS00370 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LMD38_RS00375 PF00361 Proton-conducting membrane transporter LMD38_RS00380 PF00361 Proton-conducting membrane transporter LMD38_RS00385 PF06612 Protein of unknown function (DUF1146) LMD38_RS00395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LMD38_RS00400 PF08486 Stage II sporulation protein LMD38_RS00405 PF00072 Response regulator receiver domain LMD38_RS00405 PF04397 LytTr DNA-binding domain LMD38_RS00410 PF00005 ABC transporter LMD38_RS00420 PF01551 Peptidase family M23 LMD38_RS00430 PF12116 Stage III sporulation protein D LMD38_RS00440 PF07977 FabA-like domain LMD38_RS00445 PF13614 AAA domain LMD38_RS00450 PF13807 G-rich domain on putative tyrosine kinase LMD38_RS00450 PF02706 Chain length determinant protein LMD38_RS00455 PF13614 AAA domain LMD38_RS00465 PF00483 Nucleotidyl transferase LMD38_RS00470 PF02397 Bacterial sugar transferase LMD38_RS00475 PF00535 Glycosyl transferase family 2 LMD38_RS00485 PF13439 Glycosyltransferase Family 4 LMD38_RS00485 PF00534 Glycosyl transferases group 1 LMD38_RS00495 PF01050 Mannose-6-phosphate isomerase LMD38_RS00495 PF00483 Nucleotidyl transferase LMD38_RS00500 PF01238 Phosphomannose isomerase type I LMD38_RS00505 PF03816 Cell envelope-related transcriptional attenuator domain LMD38_RS00515 PF04991 LicD family LMD38_RS00535 PF00892 EamA-like transporter family LMD38_RS00540 PF12804 MobA-like NTP transferase domain LMD38_RS00545 PF16363 GDP-mannose 4,6 dehydratase LMD38_RS00550 PF16363 GDP-mannose 4,6 dehydratase LMD38_RS00555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LMD38_RS00555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LMD38_RS00555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LMD38_RS00555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LMD38_RS00560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LMD38_RS00560 PF00874 PRD domain LMD38_RS00560 PF05043 Mga helix-turn-helix domain LMD38_RS00560 PF08279 HTH domain LMD38_RS00565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LMD38_RS00565 PF02378 Phosphotransferase system, EIIC LMD38_RS00565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LMD38_RS00570 PF01238 Phosphomannose isomerase type I LMD38_RS00575 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS00575 PF00072 Response regulator receiver domain LMD38_RS00580 PF00672 HAMP domain LMD38_RS00580 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS00580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS00595 PF07690 Major Facilitator Superfamily LMD38_RS00605 PF00005 ABC transporter LMD38_RS00610 PF12704 MacB-like periplasmic core domain LMD38_RS00610 PF02687 FtsX-like permease family LMD38_RS00615 PF04893 Yip1 domain LMD38_RS00620 PF04893 Yip1 domain LMD38_RS00625 PF04545 Sigma-70, region 4 LMD38_RS00625 PF04542 Sigma-70 region 2 LMD38_RS00655 PF00176 SNF2 family N-terminal domain LMD38_RS00655 PF00271 Helicase conserved C-terminal domain LMD38_RS00655 PF12419 SNF2 Helicase protein LMD38_RS00660 PF04434 SWIM zinc finger LMD38_RS00685 PF06725 3D domain LMD38_RS00685 PF01476 LysM domain LMD38_RS00690 PF02028 BCCT, betaine/carnitine/choline family transporter LMD38_RS00705 PF01773 Na+ dependent nucleoside transporter N-terminus LMD38_RS00705 PF07662 Na+ dependent nucleoside transporter C-terminus LMD38_RS00710 PF00877 NlpC/P60 family LMD38_RS00710 PF01476 LysM domain LMD38_RS00715 PF01063 Amino-transferase class IV LMD38_RS00720 PF00884 Sulfatase LMD38_RS00730 PF09988 Uncharacterized metal-binding protein (DUF2227) LMD38_RS00740 PF02652 L-lactate permease LMD38_RS00750 PF13667 ThiC-associated domain LMD38_RS00750 PF01964 Radical SAM ThiC family LMD38_RS00755 PF02040 Arsenical pump membrane protein LMD38_RS00760 PF02322 Cytochrome bd terminal oxidase subunit II LMD38_RS00765 PF01654 Cytochrome bd terminal oxidase subunit I LMD38_RS00780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS00780 PF03466 LysR substrate binding domain LMD38_RS00805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS00815 PF00375 Sodium:dicarboxylate symporter family LMD38_RS00820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LMD38_RS00825 PF02378 Phosphotransferase system, EIIC LMD38_RS00830 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LMD38_RS00845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LMD38_RS00850 PF02378 Phosphotransferase system, EIIC LMD38_RS00855 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LMD38_RS00860 PF02056 Family 4 glycosyl hydrolase LMD38_RS00860 PF11975 Family 4 glycosyl hydrolase C-terminal domain LMD38_RS00865 PF04794 YdjC-like protein LMD38_RS00870 PF02417 Chromate transporter LMD38_RS00880 PF03610 PTS system fructose IIA component LMD38_RS00880 PF00874 PRD domain LMD38_RS00880 PF00158 Sigma-54 interaction domain LMD38_RS00885 PF01522 Polysaccharide deacetylase LMD38_RS00890 PF00953 Glycosyl transferase family 4 LMD38_RS00895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LMD38_RS00895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LMD38_RS00895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LMD38_RS00900 PF02350 UDP-N-acetylglucosamine 2-epimerase LMD38_RS00905 PF03816 Cell envelope-related transcriptional attenuator domain LMD38_RS00910 PF09186 Domain of unknown function (DUF1949) LMD38_RS00910 PF01205 Uncharacterized protein family UPF0029 LMD38_RS00915 PF02645 Uncharacterised protein, DegV family COG1307 LMD38_RS00920 PF01638 HxlR-like helix-turn-helix LMD38_RS00925 PF01476 LysM domain LMD38_RS00925 PF00877 NlpC/P60 family LMD38_RS00930 PF04851 Type III restriction enzyme, res subunit LMD38_RS00930 PF00271 Helicase conserved C-terminal domain LMD38_RS00940 PF00313 'Cold-shock' DNA-binding domain LMD38_RS00945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LMD38_RS00945 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LMD38_RS00975 PF00005 ABC transporter LMD38_RS00985 PF02810 SEC-C motif LMD38_RS00985 PF07517 SecA DEAD-like domain LMD38_RS00985 PF01043 SecA preprotein cross-linking domain LMD38_RS00985 PF07516 SecA Wing and Scaffold domain LMD38_RS00995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LMD38_RS01000 PF00005 ABC transporter LMD38_RS01005 PF18075 FtsX extracellular domain LMD38_RS01005 PF02687 FtsX-like permease family LMD38_RS01010 PF17820 PDZ domain LMD38_RS01010 PF03572 Peptidase family S41 LMD38_RS01010 PF01471 Putative peptidoglycan binding domain LMD38_RS01015 PF17820 PDZ domain LMD38_RS01025 PF01906 Putative heavy-metal-binding LMD38_RS01030 PF00005 ABC transporter LMD38_RS01030 PF12848 ABC transporter LMD38_RS01035 PF03358 NADPH-dependent FMN reductase LMD38_RS01040 PF00376 MerR family regulatory protein LMD38_RS01040 PF09278 MerR, DNA binding LMD38_RS01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS01045 PF03466 LysR substrate binding domain LMD38_RS01050 PF03601 Conserved hypothetical protein 698 LMD38_RS01075 PF13411 MerR HTH family regulatory protein LMD38_RS01075 PF07739 TipAS antibiotic-recognition domain LMD38_RS01100 PF12344 Ultra-violet resistance protein B LMD38_RS01100 PF02151 UvrB/uvrC motif LMD38_RS01100 PF17757 UvrB interaction domain LMD38_RS01100 PF04851 Type III restriction enzyme, res subunit LMD38_RS01100 PF00271 Helicase conserved C-terminal domain LMD38_RS01105 PF00005 ABC transporter LMD38_RS01105 PF17755 UvrA DNA-binding domain LMD38_RS01105 PF17760 UvrA interaction domain LMD38_RS01120 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LMD38_RS01125 PF02603 HPr Serine kinase N terminus LMD38_RS01125 PF07475 HPr Serine kinase C-terminal domain LMD38_RS01130 PF01790 Prolipoprotein diacylglyceryl transferase LMD38_RS01135 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS01140 PF14602 Hexapeptide repeat of succinyl-transferase LMD38_RS01150 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS01160 PF00293 NUDIX domain LMD38_RS01165 PF03668 P-loop ATPase protein family LMD38_RS01170 PF01933 Uncharacterised protein family UPF0052 LMD38_RS01175 PF10298 WhiA N-terminal LAGLIDADG-like domain LMD38_RS01175 PF02650 WhiA C-terminal HTH domain LMD38_RS01175 PF14527 WhiA LAGLIDADG-like domain LMD38_RS01180 PF00381 PTS HPr component phosphorylation site LMD38_RS01185 PF00574 Clp protease LMD38_RS01190 PF04239 Protein of unknown function (DUF421) LMD38_RS01200 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LMD38_RS01205 PF07451 Stage V sporulation protein AD (SpoVAD) LMD38_RS01210 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LMD38_RS01240 PF00589 Phage integrase family LMD38_RS01240 PF02899 Phage integrase, N-terminal SAM-like domain LMD38_RS01290 PF04552 Sigma-54, DNA binding domain LMD38_RS01290 PF00309 Sigma-54 factor, Activator interacting domain (AID) LMD38_RS01290 PF04963 Sigma-54 factor, core binding domain LMD38_RS01300 PF04198 Putative sugar-binding domain LMD38_RS01305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LMD38_RS01305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LMD38_RS01310 PF00162 Phosphoglycerate kinase LMD38_RS01315 PF00121 Triosephosphate isomerase LMD38_RS01320 PF01676 Metalloenzyme superfamily LMD38_RS01320 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LMD38_RS01325 PF03952 Enolase, N-terminal domain LMD38_RS01325 PF00113 Enolase, C-terminal TIM barrel domain LMD38_RS01330 PF01156 Inosine-uridine preferring nucleoside hydrolase LMD38_RS01335 PF03788 LrgA family LMD38_RS01340 PF04172 LrgB-like family LMD38_RS01345 PF03840 Preprotein translocase SecG subunit LMD38_RS01350 PF12146 Serine aminopeptidase, S33 LMD38_RS01355 PF00575 S1 RNA binding domain LMD38_RS01355 PF00773 RNB domain LMD38_RS01355 PF08206 Ribonuclease B OB domain LMD38_RS01355 PF17876 Cold shock domain LMD38_RS01360 PF01668 SmpB protein LMD38_RS01370 PF00072 Response regulator receiver domain LMD38_RS01370 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS01380 PF01032 FecCD transport family LMD38_RS01385 PF01032 FecCD transport family LMD38_RS01390 PF00005 ABC transporter LMD38_RS01400 PF06146 Phosphate-starvation-inducible E LMD38_RS01405 PF07457 Protein of unknown function (DUF1516) LMD38_RS01410 PF07690 Major Facilitator Superfamily LMD38_RS01420 PF13302 Acetyltransferase (GNAT) domain LMD38_RS01435 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LMD38_RS01440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LMD38_RS01450 PF17202 Single cache domain 3 LMD38_RS01450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS01450 PF00672 HAMP domain LMD38_RS01460 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LMD38_RS01460 PF01565 FAD binding domain LMD38_RS01465 PF00579 tRNA synthetases class I (W and Y) LMD38_RS01465 PF01479 S4 domain LMD38_RS01470 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS01475 PF07849 Protein of unknown function (DUF1641) LMD38_RS01480 PF01638 HxlR-like helix-turn-helix LMD38_RS01485 PF07690 Major Facilitator Superfamily LMD38_RS01490 PF00248 Aldo/keto reductase family LMD38_RS01505 PF13460 NAD(P)H-binding LMD38_RS01510 PF01235 Sodium:alanine symporter family LMD38_RS01515 PF01235 Sodium:alanine symporter family LMD38_RS01520 PF01773 Na+ dependent nucleoside transporter N-terminus LMD38_RS01520 PF07662 Na+ dependent nucleoside transporter C-terminus LMD38_RS01525 PF07662 Na+ dependent nucleoside transporter C-terminus LMD38_RS01525 PF01773 Na+ dependent nucleoside transporter N-terminus LMD38_RS01535 PF00210 Ferritin-like domain LMD38_RS01545 PF03641 Possible lysine decarboxylase LMD38_RS01560 PF00210 Ferritin-like domain LMD38_RS01565 PF01235 Sodium:alanine symporter family LMD38_RS01570 PF02080 TrkA-C domain LMD38_RS01575 PF00999 Sodium/hydrogen exchanger family LMD38_RS01585 PF01047 MarR family LMD38_RS01590 PF17954 Quercetinase C-terminal cupin domain LMD38_RS01590 PF02678 Pirin LMD38_RS01595 PF02868 Thermolysin metallopeptidase, alpha-helical domain LMD38_RS01595 PF01447 Thermolysin metallopeptidase, catalytic domain LMD38_RS01595 PF03413 Peptidase propeptide and YPEB domain LMD38_RS01595 PF07504 Fungalysin/Thermolysin Propeptide Motif LMD38_RS01600 PF01883 Iron-sulfur cluster assembly protein LMD38_RS01605 PF00672 HAMP domain LMD38_RS01605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS01605 PF02743 Cache domain LMD38_RS01610 PF02743 Cache domain LMD38_RS01610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS01610 PF00672 HAMP domain LMD38_RS01620 PF09334 tRNA synthetases class I (M) LMD38_RS01620 PF08264 Anticodon-binding domain of tRNA LMD38_RS01635 PF16736 Single Cache-like LMD38_RS01635 PF00989 PAS fold LMD38_RS01635 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS01640 PF00072 Response regulator receiver domain LMD38_RS01640 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS01645 PF17969 L,D-transpeptidase C-terminal domain LMD38_RS01645 PF03734 L,D-transpeptidase catalytic domain LMD38_RS01655 PF09335 SNARE associated Golgi protein LMD38_RS01680 PF00005 ABC transporter LMD38_RS01690 PF12679 ABC-2 family transporter protein LMD38_RS01695 PF00072 Response regulator receiver domain LMD38_RS01695 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS01700 PF00672 HAMP domain LMD38_RS01700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS01700 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS01700 PF13426 PAS domain LMD38_RS01710 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS01710 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LMD38_RS01720 PF02096 60Kd inner membrane protein LMD38_RS01735 PF13520 Amino acid permease LMD38_RS01740 PF07690 Major Facilitator Superfamily LMD38_RS01755 PF02743 Cache domain LMD38_RS01755 PF00672 HAMP domain LMD38_RS01755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS01760 PF01910 Thiamine-binding protein LMD38_RS01765 PF10835 Protein of unknown function (DUF2573) LMD38_RS01770 PF01619 Proline dehydrogenase LMD38_RS01775 PF07943 Penicillin-binding protein 5, C-terminal domain LMD38_RS01775 PF00768 D-alanyl-D-alanine carboxypeptidase LMD38_RS01780 PF14115 YuzL-like protein LMD38_RS01785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LMD38_RS01785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LMD38_RS01785 PF00378 Enoyl-CoA hydratase/isomerase LMD38_RS01790 PF02803 Thiolase, C-terminal domain LMD38_RS01790 PF00108 Thiolase, N-terminal domain LMD38_RS01795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LMD38_RS01795 PF02770 Acyl-CoA dehydrogenase, middle domain LMD38_RS01795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMD38_RS01800 PF00753 Metallo-beta-lactamase superfamily LMD38_RS01805 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS01805 PF13305 Tetracyclin repressor-like, C-terminal domain LMD38_RS01815 PF01381 Helix-turn-helix LMD38_RS01815 PF08671 Anti-repressor SinI LMD38_RS01835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LMD38_RS01835 PF00056 lactate/malate dehydrogenase, NAD binding domain LMD38_RS01860 PF03960 ArsC family LMD38_RS01865 PF01597 Glycine cleavage H-protein LMD38_RS01870 PF01751 Toprim domain LMD38_RS01875 PF00085 Thioredoxin LMD38_RS01885 PF00005 ABC transporter LMD38_RS01885 PF09383 NIL domain LMD38_RS01890 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS01895 PF03180 NLPA lipoprotein LMD38_RS01900 PF03180 NLPA lipoprotein LMD38_RS01905 PF00005 ABC transporter LMD38_RS01910 PF01458 Uncharacterized protein family (UPF0051) LMD38_RS01915 PF00266 Aminotransferase class-V LMD38_RS01920 PF01592 NifU-like N terminal domain LMD38_RS01925 PF01458 Uncharacterized protein family (UPF0051) LMD38_RS01930 PF04892 VanZ like family LMD38_RS01935 PF03551 Transcriptional regulator PadR-like family LMD38_RS01940 PF02872 5'-nucleotidase, C-terminal domain LMD38_RS01945 PF08827 Domain of unknown function (DUF1805) LMD38_RS01955 PF01551 Peptidase family M23 LMD38_RS01960 PF04055 Radical SAM superfamily LMD38_RS01960 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LMD38_RS01980 PF10086 YhfC intramembrane metalloprotease LMD38_RS01985 PF13411 MerR HTH family regulatory protein LMD38_RS01985 PF07739 TipAS antibiotic-recognition domain LMD38_RS01990 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LMD38_RS01995 PF06265 Protein of unknown function (DUF1027) LMD38_RS02010 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LMD38_RS02015 PF01934 Protein of unknown function DUF86 LMD38_RS02025 PF13344 Haloacid dehalogenase-like hydrolase LMD38_RS02030 PF02525 Flavodoxin-like fold LMD38_RS02040 PF11202 Phosphoribosyl transferase (PRTase) LMD38_RS02040 PF15608 PELOTA RNA binding domain LMD38_RS02060 PF04608 Phosphatidylglycerophosphatase A LMD38_RS02075 PF01106 NifU-like domain LMD38_RS02080 PF07315 Protein of unknown function (DUF1462) LMD38_RS02085 PF13427 Domain of unknown function (DUF4111) LMD38_RS02085 PF01909 Nucleotidyltransferase domain LMD38_RS02130 PF03831 PhnA domain LMD38_RS02130 PF08274 PhnA Zinc-Ribbon LMD38_RS02135 PF03649 Uncharacterised protein family (UPF0014) LMD38_RS02140 PF00005 ABC transporter LMD38_RS02140 PF09383 NIL domain LMD38_RS02150 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS02155 PF07293 Protein of unknown function (DUF1450) LMD38_RS02160 PF01678 Diaminopimelate epimerase LMD38_RS02165 PF01521 Iron-sulphur cluster biosynthesis LMD38_RS02180 PF01596 O-methyltransferase LMD38_RS02190 PF04463 Protein of unknown function (DUF523) LMD38_RS02205 PF06445 GyrI-like small molecule binding domain LMD38_RS02210 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS02215 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS02220 PF13344 Haloacid dehalogenase-like hydrolase LMD38_RS02220 PF00293 NUDIX domain LMD38_RS02230 PF06725 3D domain LMD38_RS02235 PF02789 Cytosol aminopeptidase family, N-terminal domain LMD38_RS02235 PF00883 Cytosol aminopeptidase family, catalytic domain LMD38_RS02240 PF02457 DisA bacterial checkpoint controller nucleotide-binding LMD38_RS02240 PF10372 Bacterial membrane-spanning protein N-terminus LMD38_RS02245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LMD38_RS02245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LMD38_RS02245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LMD38_RS02245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LMD38_RS02250 PF00483 Nucleotidyl transferase LMD38_RS02255 PF02632 BioY family LMD38_RS02265 PF03061 Thioesterase superfamily LMD38_RS02270 PF03129 Anticodon binding domain LMD38_RS02270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMD38_RS02285 PF03600 Citrate transporter LMD38_RS02290 PF00929 Exonuclease LMD38_RS02295 PF08810 Kinase associated protein B LMD38_RS02310 PF00155 Aminotransferase class I and II LMD38_RS02320 PF08386 TAP-like protein LMD38_RS02320 PF00561 alpha/beta hydrolase fold LMD38_RS02325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMD38_RS02325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMD38_RS02330 PF01037 Lrp/AsnC ligand binding domain LMD38_RS02335 PF00155 Aminotransferase class I and II LMD38_RS02340 PF00575 S1 RNA binding domain LMD38_RS02345 PF04070 Domain of unknown function (DUF378) LMD38_RS02350 PF00342 Phosphoglucose isomerase LMD38_RS02355 PF08868 YugN-like family LMD38_RS02360 PF02254 TrkA-N domain LMD38_RS02360 PF07885 Ion channel LMD38_RS02365 PF02308 MgtC family LMD38_RS02400 PF05697 Bacterial trigger factor protein (TF) LMD38_RS02400 PF05698 Bacterial trigger factor protein (TF) C-terminus LMD38_RS02500 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LMD38_RS02500 PF00056 lactate/malate dehydrogenase, NAD binding domain LMD38_RS02505 PF02225 PA domain LMD38_RS02505 PF05922 Peptidase inhibitor I9 LMD38_RS02505 PF00082 Subtilase family LMD38_RS02505 PF13860 FlgD Ig-like domain LMD38_RS02515 PF00128 Alpha amylase, catalytic domain LMD38_RS02515 PF02806 Alpha amylase, C-terminal all-beta domain LMD38_RS02515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LMD38_RS02520 PF00483 Nucleotidyl transferase LMD38_RS02525 PF00483 Nucleotidyl transferase LMD38_RS02530 PF08323 Starch synthase catalytic domain LMD38_RS02530 PF00534 Glycosyl transferases group 1 LMD38_RS02535 PF00343 Carbohydrate phosphorylase LMD38_RS02555 PF00313 'Cold-shock' DNA-binding domain LMD38_RS02560 PF01258 Prokaryotic dksA/traR C4-type zinc finger LMD38_RS02565 PF01040 UbiA prenyltransferase family LMD38_RS02570 PF00425 chorismate binding enzyme LMD38_RS02575 PF16582 Middle domain of thiamine pyrophosphate LMD38_RS02575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMD38_RS02575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMD38_RS02580 PF12697 Alpha/beta hydrolase family LMD38_RS02585 PF00378 Enoyl-CoA hydratase/isomerase LMD38_RS02590 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS02590 PF00501 AMP-binding enzyme LMD38_RS02595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LMD38_RS02595 PF13378 Enolase C-terminal domain-like LMD38_RS02600 PF00072 Response regulator receiver domain LMD38_RS02600 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS02605 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS02610 PF02557 D-alanyl-D-alanine carboxypeptidase LMD38_RS02625 PF01979 Amidohydrolase family LMD38_RS02630 PF03841 L-seryl-tRNA selenium transferase LMD38_RS02635 PF07071 KDGP aldolase LMD38_RS02645 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS02645 PF07702 UTRA domain LMD38_RS02650 PF02447 GntP family permease LMD38_RS02660 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS02660 PF13977 BetI-type transcriptional repressor, C-terminal LMD38_RS02670 PF02687 FtsX-like permease family LMD38_RS02675 PF00005 ABC transporter LMD38_RS02680 PF02687 FtsX-like permease family LMD38_RS02685 PF02687 FtsX-like permease family LMD38_RS02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS02695 PF00072 Response regulator receiver domain LMD38_RS02695 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS02700 PF01022 Bacterial regulatory protein, arsR family LMD38_RS02705 PF07853 Protein of unknown function (DUF1648) LMD38_RS02705 PF13630 SdpI/YhfL protein family LMD38_RS02710 PF12833 Helix-turn-helix domain LMD38_RS02710 PF06445 GyrI-like small molecule binding domain LMD38_RS02715 PF00005 ABC transporter LMD38_RS02720 PF02687 FtsX-like permease family LMD38_RS02725 PF00398 Ribosomal RNA adenine dimethylase LMD38_RS02730 PF09335 SNARE associated Golgi protein LMD38_RS02745 PF00005 ABC transporter LMD38_RS02750 PF02687 FtsX-like permease family LMD38_RS02770 PF00781 Diacylglycerol kinase catalytic domain LMD38_RS02775 PF00156 Phosphoribosyl transferase domain LMD38_RS02790 PF00395 S-layer homology domain LMD38_RS02790 PF01520 N-acetylmuramoyl-L-alanine amidase LMD38_RS02805 PF00072 Response regulator receiver domain LMD38_RS02805 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS02810 PF00672 HAMP domain LMD38_RS02810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS02810 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS02815 PF09515 Thiamine transporter protein (Thia_YuaJ) LMD38_RS02825 PF17910 FeoB cytosolic helical domain LMD38_RS02825 PF07664 Ferrous iron transport protein B C terminus LMD38_RS02825 PF02421 Ferrous iron transport protein B LMD38_RS02825 PF07670 Nucleoside recognition LMD38_RS02840 PF04012 PspA/IM30 family LMD38_RS02865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LMD38_RS02865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS02880 PF10676 Spore germination protein gerPA/gerPF LMD38_RS02885 PF02322 Cytochrome bd terminal oxidase subunit II LMD38_RS02890 PF01654 Cytochrome bd terminal oxidase subunit I LMD38_RS02895 PF00484 Carbonic anhydrase LMD38_RS02900 PF01809 Putative membrane protein insertion efficiency factor LMD38_RS02905 PF02664 S-Ribosylhomocysteinase (LuxS) LMD38_RS02930 PF00293 NUDIX domain LMD38_RS02940 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS02955 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS02960 PF00005 ABC transporter LMD38_RS02990 PF00884 Sulfatase LMD38_RS02995 PF00561 alpha/beta hydrolase fold LMD38_RS02995 PF08386 TAP-like protein LMD38_RS03000 PF08447 PAS fold LMD38_RS03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS03000 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS03000 PF00989 PAS fold LMD38_RS03005 PF13188 PAS domain LMD38_RS03005 PF13426 PAS domain LMD38_RS03005 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS03005 PF00989 PAS fold LMD38_RS03005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS03030 PF01784 NIF3 (NGG1p interacting factor 3) LMD38_RS03065 PF01293 Phosphoenolpyruvate carboxykinase LMD38_RS03070 PF00438 S-adenosylmethionine synthetase, N-terminal domain LMD38_RS03070 PF02772 S-adenosylmethionine synthetase, central domain LMD38_RS03070 PF02773 S-adenosylmethionine synthetase, C-terminal domain LMD38_RS03075 PF13302 Acetyltransferase (GNAT) domain LMD38_RS03090 PF00994 Probable molybdopterin binding domain LMD38_RS03095 PF12804 MobA-like NTP transferase domain LMD38_RS03100 PF13439 Glycosyltransferase Family 4 LMD38_RS03100 PF00534 Glycosyl transferases group 1 LMD38_RS03105 PF01569 PAP2 superfamily LMD38_RS03110 PF00132 Bacterial transferase hexapeptide (six repeats) LMD38_RS03115 PF12146 Serine aminopeptidase, S33 LMD38_RS03120 PF10776 Protein of unknown function (DUF2600) LMD38_RS03140 PF01177 Asp/Glu/Hydantoin racemase LMD38_RS03150 PF00005 ABC transporter LMD38_RS03155 PF06962 Putative rRNA methylase LMD38_RS03160 PF04055 Radical SAM superfamily LMD38_RS03160 PF16199 Radical_SAM C-terminal domain LMD38_RS03165 PF10732 Protein of unknown function (DUF2524) LMD38_RS03175 PF07786 Protein of unknown function (DUF1624) LMD38_RS03175 PF04235 Protein of unknown function (DUF418) LMD38_RS03180 PF00005 ABC transporter LMD38_RS03190 PF00589 Phage integrase family LMD38_RS03195 PF02080 TrkA-C domain LMD38_RS03200 PF00999 Sodium/hydrogen exchanger family LMD38_RS03205 PF07690 Major Facilitator Superfamily LMD38_RS03210 PF08264 Anticodon-binding domain of tRNA LMD38_RS03210 PF09334 tRNA synthetases class I (M) LMD38_RS03210 PF13603 Leucyl-tRNA synthetase, Domain 2 LMD38_RS03210 PF00133 tRNA synthetases class I (I, L, M and V) LMD38_RS03240 PF03845 Spore germination protein LMD38_RS03245 PF03323 Bacillus/Clostridium GerA spore germination protein LMD38_RS03245 PF03323 Bacillus/Clostridium GerA spore germination protein LMD38_RS03250 PF00561 alpha/beta hydrolase fold LMD38_RS03260 PF00581 Rhodanese-like domain LMD38_RS03280 PF06463 Molybdenum Cofactor Synthesis C LMD38_RS03280 PF04055 Radical SAM superfamily LMD38_RS03285 PF00899 ThiF family LMD38_RS03290 PF01967 MoaC family LMD38_RS03295 PF03453 MoeA N-terminal region (domain I and II) LMD38_RS03295 PF03454 MoeA C-terminal region (domain IV) LMD38_RS03295 PF00994 Probable molybdopterin binding domain LMD38_RS03300 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LMD38_RS03305 PF07282 Putative transposase DNA-binding domain LMD38_RS03305 PF01385 Probable transposase LMD38_RS03305 PF12323 Helix-turn-helix domain LMD38_RS03310 PF02391 MoaE protein LMD38_RS03325 PF06800 Sugar transport protein LMD38_RS03335 PF02559 CarD-like/TRCF domain LMD38_RS03345 PF10957 Sporulation protein Cse60 LMD38_RS03355 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LMD38_RS03360 PF01022 Bacterial regulatory protein, arsR family LMD38_RS03365 PF07690 Major Facilitator Superfamily LMD38_RS03375 PF01943 Polysaccharide biosynthesis protein LMD38_RS03375 PF14667 Polysaccharide biosynthesis C-terminal domain LMD38_RS03380 PF00849 RNA pseudouridylate synthase LMD38_RS03380 PF01479 S4 domain LMD38_RS03385 PF08220 DeoR-like helix-turn-helix domain LMD38_RS03390 PF01546 Peptidase family M20/M25/M40 LMD38_RS03395 PF02834 LigT like Phosphoesterase LMD38_RS03400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LMD38_RS03400 PF17999 Pullulanase N1-terminal domain LMD38_RS03400 PF00128 Alpha amylase, catalytic domain LMD38_RS03405 PF01636 Phosphotransferase enzyme family LMD38_RS03410 PF14165 YtzH-like protein LMD38_RS03415 PF02390 Putative methyltransferase LMD38_RS03420 PF00753 Metallo-beta-lactamase superfamily LMD38_RS03430 PF05343 M42 glutamyl aminopeptidase LMD38_RS03435 PF01931 Protein of unknown function DUF84 LMD38_RS03440 PF00085 Thioredoxin LMD38_RS03445 PF07285 Protein of unknown function (DUF1444) LMD38_RS03450 PF14794 Domain of unknown function (DUF4479) LMD38_RS03450 PF01588 Putative tRNA binding domain LMD38_RS03460 PF01520 N-acetylmuramoyl-L-alanine amidase LMD38_RS03460 PF08239 Bacterial SH3 domain LMD38_RS03465 PF17854 FtsK alpha domain LMD38_RS03465 PF09397 Ftsk gamma domain LMD38_RS03465 PF01580 FtsK/SpoIIIE family LMD38_RS03475 PF01225 Mur ligase family, catalytic domain LMD38_RS03475 PF08245 Mur ligase middle domain LMD38_RS03475 PF02875 Mur ligase family, glutamate ligase domain LMD38_RS03480 PF13302 Acetyltransferase (GNAT) domain LMD38_RS03505 PF02073 Thermophilic metalloprotease (M29) LMD38_RS03515 PF11009 Protein of unknown function (DUF2847) LMD38_RS03520 PF07537 CamS sex pheromone cAM373 precursor LMD38_RS03525 PF00356 Bacterial regulatory proteins, lacI family LMD38_RS03550 PF01741 Large-conductance mechanosensitive channel, MscL LMD38_RS03555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LMD38_RS03575 PF00850 Histone deacetylase domain LMD38_RS03580 PF00571 CBS domain LMD38_RS03585 PF00583 Acetyltransferase (GNAT) family LMD38_RS03590 PF00501 AMP-binding enzyme LMD38_RS03590 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS03600 PF01479 S4 domain LMD38_RS03600 PF00579 tRNA synthetases class I (W and Y) LMD38_RS03625 PF14436 Bacterial EndoU nuclease LMD38_RS03625 PF04740 LXG domain of WXG superfamily LMD38_RS03630 PF00163 Ribosomal protein S4/S9 N-terminal domain LMD38_RS03630 PF01479 S4 domain LMD38_RS03635 PF01053 Cys/Met metabolism PLP-dependent enzyme LMD38_RS03640 PF13185 GAF domain LMD38_RS03645 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS03650 PF00892 EamA-like transporter family LMD38_RS03655 PF03466 LysR substrate binding domain LMD38_RS03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS03660 PF06160 Septation ring formation regulator, EzrA LMD38_RS03665 PF00266 Aminotransferase class-V LMD38_RS03670 PF02926 THUMP domain LMD38_RS03670 PF02568 Thiamine biosynthesis protein (ThiI) LMD38_RS03675 PF00269 Small, acid-soluble spore proteins, alpha/beta type LMD38_RS03680 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS03680 PF00501 AMP-binding enzyme LMD38_RS03690 PF07969 Amidohydrolase family LMD38_RS03695 PF01513 ATP-NAD kinase LMD38_RS03705 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LMD38_RS03710 PF08534 Redoxin LMD38_RS03715 PF02384 N-6 DNA Methylase LMD38_RS03720 PF00871 Acetokinase family LMD38_RS03735 PF12787 EcsC protein family LMD38_RS03740 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS03740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LMD38_RS03755 PF00764 Arginosuccinate synthase LMD38_RS03760 PF00206 Lyase LMD38_RS03760 PF14698 Argininosuccinate lyase C-terminal LMD38_RS03780 PF00582 Universal stress protein family LMD38_RS03790 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LMD38_RS03790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LMD38_RS03800 PF01381 Helix-turn-helix LMD38_RS03810 PF07883 Cupin domain LMD38_RS03850 PF01321 Creatinase/Prolidase N-terminal domain LMD38_RS03850 PF00557 Metallopeptidase family M24 LMD38_RS03865 PF03061 Thioesterase superfamily LMD38_RS03865 PF00571 CBS domain LMD38_RS03865 PF07085 DRTGG domain LMD38_RS03865 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS03875 PF01636 Phosphotransferase enzyme family LMD38_RS03885 PF14007 YtpI-like protein LMD38_RS03890 PF02272 DHHA1 domain LMD38_RS03890 PF01368 DHH family LMD38_RS03900 PF14034 Sporulation protein YtrH LMD38_RS03905 PF07733 Bacterial DNA polymerase III alpha NTPase domain LMD38_RS03905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LMD38_RS03905 PF14579 Helix-hairpin-helix motif LMD38_RS03905 PF02811 PHP domain LMD38_RS03905 PF01336 OB-fold nucleic acid binding domain LMD38_RS03910 PF00390 Malic enzyme, N-terminal domain LMD38_RS03910 PF03949 Malic enzyme, NAD binding domain LMD38_RS03915 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS03920 PF01039 Carboxyl transferase domain LMD38_RS03920 PF17848 Acetyl-coA carboxylase zinc finger domain LMD38_RS03925 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LMD38_RS03930 PF00365 Phosphofructokinase LMD38_RS03935 PF00391 PEP-utilising enzyme, mobile domain LMD38_RS03935 PF00224 Pyruvate kinase, barrel domain LMD38_RS03935 PF02887 Pyruvate kinase, alpha/beta domain LMD38_RS03940 PF04186 FxsA cytoplasmic membrane protein LMD38_RS03945 PF01594 AI-2E family transporter LMD38_RS03950 PF04284 Protein of unknown function (DUF441) LMD38_RS03955 PF00285 Citrate synthase, C-terminal domain LMD38_RS03960 PF00180 Isocitrate/isopropylmalate dehydrogenase LMD38_RS03965 PF00056 lactate/malate dehydrogenase, NAD binding domain LMD38_RS03965 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LMD38_RS03980 PF00072 Response regulator receiver domain LMD38_RS03980 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS03985 PF16736 Single Cache-like LMD38_RS03985 PF00989 PAS fold LMD38_RS03985 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS03990 PF01367 5'-3' exonuclease, C-terminal SAM fold LMD38_RS03990 PF00476 DNA polymerase family A LMD38_RS03990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LMD38_RS03995 PF06827 Zinc finger found in FPG and IleRS LMD38_RS03995 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LMD38_RS03995 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LMD38_RS04000 PF02659 Putative manganese efflux pump LMD38_RS04005 PF01121 Dephospho-CoA kinase LMD38_RS04010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LMD38_RS04010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LMD38_RS04015 PF02675 S-adenosylmethionine decarboxylase LMD38_RS04020 PF03477 ATP cone domain LMD38_RS04025 PF07261 Replication initiation and membrane attachment LMD38_RS04030 PF07319 Primosomal protein DnaI N-terminus LMD38_RS04030 PF01695 IstB-like ATP binding protein LMD38_RS04035 PF08812 YtxC-like family LMD38_RS04040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMD38_RS04040 PF02824 TGS domain LMD38_RS04040 PF03129 Anticodon binding domain LMD38_RS04040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LMD38_RS04045 PF00707 Translation initiation factor IF-3, C-terminal domain LMD38_RS04045 PF05198 Translation initiation factor IF-3, N-terminal domain LMD38_RS04050 PF01632 Ribosomal protein L35 LMD38_RS04055 PF00453 Ribosomal protein L20 LMD38_RS04065 PF05343 M42 glutamyl aminopeptidase LMD38_RS04070 PF16859 Tetracyclin repressor-like, C-terminal domain LMD38_RS04070 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS04080 PF07690 Major Facilitator Superfamily LMD38_RS04100 PF01966 HD domain LMD38_RS04105 PF14098 Small, acid-soluble spore protein I LMD38_RS04110 PF08032 RNA 2'-O ribose methyltransferase substrate binding LMD38_RS04110 PF00588 SpoU rRNA Methylase family LMD38_RS04115 PF01409 tRNA synthetases class II core domain (F) LMD38_RS04115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LMD38_RS04120 PF01588 Putative tRNA binding domain LMD38_RS04120 PF03483 B3/4 domain LMD38_RS04120 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LMD38_RS04120 PF03147 Ferredoxin-fold anticodon binding domain LMD38_RS04120 PF03484 tRNA synthetase B5 domain LMD38_RS04125 PF01336 OB-fold nucleic acid binding domain LMD38_RS04125 PF00152 tRNA synthetases class II (D, K and N) LMD38_RS04145 PF01351 Ribonuclease HII LMD38_RS04145 PF11858 Domain of unknown function (DUF3378) LMD38_RS04150 PF05164 Cell division protein ZapA LMD38_RS04155 PF02674 Colicin V production protein LMD38_RS04160 PF14791 DNA polymerase beta thumb LMD38_RS04160 PF14716 Helix-hairpin-helix domain LMD38_RS04160 PF02811 PHP domain LMD38_RS04165 PF00488 MutS domain V LMD38_RS04165 PF01713 Smr domain LMD38_RS04170 PF01479 S4 domain LMD38_RS04170 PF00849 RNA pseudouridylate synthase LMD38_RS04175 PF05525 Branched-chain amino acid transport protein LMD38_RS04180 PF05031 Iron Transport-associated domain LMD38_RS04185 PF05031 Iron Transport-associated domain LMD38_RS04190 PF01497 Periplasmic binding protein LMD38_RS04195 PF01032 FecCD transport family LMD38_RS04200 PF00005 ABC transporter LMD38_RS04205 PF04203 Sortase domain LMD38_RS04210 PF03992 Antibiotic biosynthesis monooxygenase LMD38_RS04215 PF17785 PUA-like domain LMD38_RS04215 PF10672 S-adenosylmethionine-dependent methyltransferase LMD38_RS04220 PF09962 Uncharacterized conserved protein (DUF2196) LMD38_RS04230 PF00072 Response regulator receiver domain LMD38_RS04230 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS04235 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS04240 PF00005 ABC transporter LMD38_RS04265 PF05163 DinB family LMD38_RS04280 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS04280 PF00501 AMP-binding enzyme LMD38_RS04285 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS04285 PF08359 YsiA-like protein, C-terminal region LMD38_RS04290 PF00378 Enoyl-CoA hydratase/isomerase LMD38_RS04295 PF01012 Electron transfer flavoprotein domain LMD38_RS04300 PF01012 Electron transfer flavoprotein domain LMD38_RS04300 PF00766 Electron transfer flavoprotein FAD-binding domain LMD38_RS04305 PF00085 Thioredoxin LMD38_RS04310 PF01541 GIY-YIG catalytic domain LMD38_RS04310 PF02151 UvrB/uvrC motif LMD38_RS04310 PF08459 UvrC Helix-hairpin-helix N-terminal LMD38_RS04315 PF10702 Protein of unknown function (DUF2507) LMD38_RS04320 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LMD38_RS04325 PF00890 FAD binding domain LMD38_RS04325 PF02910 Fumarate reductase flavoprotein C-term LMD38_RS04330 PF13085 2Fe-2S iron-sulfur cluster binding domain LMD38_RS04330 PF13183 4Fe-4S dicluster domain LMD38_RS04335 PF03061 Thioesterase superfamily LMD38_RS04340 PF02557 D-alanyl-D-alanine carboxypeptidase LMD38_RS04345 PF01618 MotA/TolQ/ExbB proton channel family LMD38_RS04350 PF13677 Membrane MotB of proton-channel complex MotA/MotB LMD38_RS04350 PF00691 OmpA family LMD38_RS04355 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LMD38_RS04360 PF13732 Domain of unknown function (DUF4162) LMD38_RS04360 PF00005 ABC transporter LMD38_RS04370 PF02082 Transcriptional regulator LMD38_RS04375 PF00230 Major intrinsic protein LMD38_RS04380 PF13536 Putative multidrug resistance efflux transporter LMD38_RS04385 PF07883 Cupin domain LMD38_RS04385 PF01381 Helix-turn-helix LMD38_RS04390 PF04024 PspC domain LMD38_RS04395 PF07969 Amidohydrolase family LMD38_RS04400 PF00860 Permease family LMD38_RS04405 PF00196 Bacterial regulatory proteins, luxR family LMD38_RS04445 PF01368 DHH family LMD38_RS04445 PF17768 RecJ OB domain LMD38_RS04445 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LMD38_RS04445 PF02272 DHHA1 domain LMD38_RS04470 PF00145 C-5 cytosine-specific DNA methylase LMD38_RS04470 PF12728 Helix-turn-helix domain LMD38_RS04490 PF02463 RecF/RecN/SMC N terminal domain LMD38_RS04560 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS04570 PF07690 Major Facilitator Superfamily LMD38_RS04575 PF01177 Asp/Glu/Hydantoin racemase LMD38_RS04580 PF10646 Sporulation and spore germination LMD38_RS04585 PF03725 3' exoribonuclease family, domain 2 LMD38_RS04585 PF01138 3' exoribonuclease family, domain 1 LMD38_RS04590 PF01725 Ham1 family LMD38_RS04595 PF12850 Calcineurin-like phosphoesterase superfamily domain LMD38_RS04610 PF18801 response regulator aspartate phosphatase H, N terminal LMD38_RS04625 PF08000 Bacterial PH domain LMD38_RS04625 PF11724 YvbH-like oligomerisation region LMD38_RS04645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LMD38_RS04645 PF05698 Bacterial trigger factor protein (TF) C-terminus LMD38_RS04645 PF05697 Bacterial trigger factor protein (TF) LMD38_RS04650 PF06689 ClpX C4-type zinc finger LMD38_RS04650 PF07724 AAA domain (Cdc48 subfamily) LMD38_RS04650 PF10431 C-terminal, D2-small domain, of ClpB protein LMD38_RS04655 PF00004 ATPase family associated with various cellular activities (AAA) LMD38_RS04655 PF05362 Lon protease (S16) C-terminal proteolytic domain LMD38_RS04660 PF00004 ATPase family associated with various cellular activities (AAA) LMD38_RS04660 PF05362 Lon protease (S16) C-terminal proteolytic domain LMD38_RS04660 PF02190 ATP-dependent protease La (LON) substrate-binding domain LMD38_RS04665 PF01926 50S ribosome-binding GTPase LMD38_RS04670 PF02566 OsmC-like protein LMD38_RS04675 PF01047 MarR family LMD38_RS04680 PF01488 Shikimate / quinate 5-dehydrogenase LMD38_RS04680 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LMD38_RS04680 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LMD38_RS04685 PF01578 Cytochrome C assembly protein LMD38_RS04690 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LMD38_RS04690 PF03900 Porphobilinogen deaminase, C-terminal domain LMD38_RS04695 PF02602 Uroporphyrinogen-III synthase HemD LMD38_RS04700 PF00490 Delta-aminolevulinic acid dehydratase LMD38_RS04705 PF00202 Aminotransferase class-III LMD38_RS04710 PF01476 LysM domain LMD38_RS04720 PF10458 Valyl tRNA synthetase tRNA binding arm LMD38_RS04720 PF00133 tRNA synthetases class I (I, L, M and V) LMD38_RS04720 PF08264 Anticodon-binding domain of tRNA LMD38_RS04725 PF08245 Mur ligase middle domain LMD38_RS04725 PF02875 Mur ligase family, glutamate ligase domain LMD38_RS04735 PF02545 Maf-like protein LMD38_RS04740 PF04002 RadC-like JAB domain LMD38_RS04750 PF04085 rod shape-determining protein MreC LMD38_RS04760 PF03775 Septum formation inhibitor MinC, C-terminal domain LMD38_RS04765 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LMD38_RS04770 PF01551 Peptidase family M23 LMD38_RS04775 PF02163 Peptidase family M50 LMD38_RS04780 PF00575 S1 RNA binding domain LMD38_RS04780 PF10150 Ribonuclease E/G family LMD38_RS04785 PF00829 Ribosomal prokaryotic L21 protein LMD38_RS04790 PF04327 Cysteine protease Prp LMD38_RS04795 PF01016 Ribosomal L27 protein LMD38_RS04800 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LMD38_RS04800 PF14682 Sporulation initiation phospho-transferase B, C-terminal LMD38_RS04805 PF09269 Domain of unknown function (DUF1967) LMD38_RS04805 PF01926 50S ribosome-binding GTPase LMD38_RS04805 PF01018 GTP1/OBG LMD38_RS04810 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS04810 PF00072 Response regulator receiver domain LMD38_RS04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS04820 PF00005 ABC transporter LMD38_RS04825 PF02687 FtsX-like permease family LMD38_RS04830 PF02687 FtsX-like permease family LMD38_RS04835 PF01842 ACT domain LMD38_RS04835 PF00800 Prephenate dehydratase LMD38_RS04845 PF03475 3-alpha domain LMD38_RS04845 PF03473 MOSC domain LMD38_RS04850 PF02829 3H domain LMD38_RS04850 PF08279 HTH domain LMD38_RS04855 PF00266 Aminotransferase class-V LMD38_RS04860 PF00890 FAD binding domain LMD38_RS04860 PF02910 Fumarate reductase flavoprotein C-term LMD38_RS04865 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LMD38_RS04865 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LMD38_RS04870 PF02445 Quinolinate synthetase A protein LMD38_RS04875 PF01476 LysM domain LMD38_RS04895 PF01330 RuvA N terminal domain LMD38_RS04895 PF07499 RuvA, C-terminal domain LMD38_RS04900 PF17864 RuvB AAA lid domain LMD38_RS04900 PF05491 RuvB C-terminal winged helix domain LMD38_RS04900 PF05496 Holliday junction DNA helicase RuvB P-loop domain LMD38_RS04905 PF11146 Protein of unknown function (DUF2905) LMD38_RS04910 PF02547 Queuosine biosynthesis protein LMD38_RS04915 PF01702 Queuine tRNA-ribosyltransferase LMD38_RS04920 PF02699 Preprotein translocase subunit LMD38_RS04930 PF04239 Protein of unknown function (DUF421) LMD38_RS04935 PF01943 Polysaccharide biosynthesis protein LMD38_RS04935 PF14667 Polysaccharide biosynthesis C-terminal domain LMD38_RS04940 PF13797 Post-transcriptional regulator LMD38_RS04945 PF02355 Protein export membrane protein LMD38_RS04945 PF07549 SecD/SecF GG Motif LMD38_RS04950 PF16916 Dimerisation domain of Zinc Transporter LMD38_RS04950 PF01545 Cation efflux family LMD38_RS04955 PF17768 RecJ OB domain LMD38_RS04955 PF01368 DHH family LMD38_RS04955 PF02272 DHHA1 domain LMD38_RS04955 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LMD38_RS04960 PF00156 Phosphoribosyl transferase domain LMD38_RS04965 PF13291 ACT domain LMD38_RS04965 PF04607 Region found in RelA / SpoT proteins LMD38_RS04965 PF02824 TGS domain LMD38_RS04970 PF02580 D-Tyr-tRNA(Tyr) deacylase LMD38_RS04990 PF03129 Anticodon binding domain LMD38_RS04990 PF13393 Histidyl-tRNA synthetase LMD38_RS04995 PF02938 GAD domain LMD38_RS04995 PF00152 tRNA synthetases class II (D, K and N) LMD38_RS04995 PF01336 OB-fold nucleic acid binding domain LMD38_RS05000 PF00899 ThiF family LMD38_RS05010 PF16193 AAA C-terminal domain LMD38_RS05010 PF12002 MgsA AAA+ ATPase C terminal LMD38_RS05010 PF05496 Holliday junction DNA helicase RuvB P-loop domain LMD38_RS05015 PF02082 Transcriptional regulator LMD38_RS05020 PF00266 Aminotransferase class-V LMD38_RS05035 PF13538 UvrD-like helicase C-terminal domain LMD38_RS05035 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LMD38_RS05035 PF14490 Helix-hairpin-helix containing domain LMD38_RS05055 PF01594 AI-2E family transporter LMD38_RS05065 PF02272 DHHA1 domain LMD38_RS05065 PF01411 tRNA synthetases class II (A) LMD38_RS05065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LMD38_RS05070 PF06135 IreB regulatory phosphoprotein LMD38_RS05075 PF03652 Holliday junction resolvase LMD38_RS05080 PF06949 Protein of unknown function (DUF1292) LMD38_RS05085 PF02618 YceG-like family LMD38_RS05090 PF01596 O-methyltransferase LMD38_RS05095 PF01136 Peptidase family U32 LMD38_RS05100 PF16325 Peptidase family U32 C-terminal domain LMD38_RS05100 PF01136 Peptidase family U32 LMD38_RS05105 PF00485 Phosphoribulokinase / Uridine kinase family LMD38_RS05110 PF01272 Transcription elongation factor, GreA/GreB, C-term LMD38_RS05110 PF03449 Transcription elongation factor, N-terminal LMD38_RS05115 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS05115 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS05130 PF08241 Methyltransferase domain LMD38_RS05135 PF01048 Phosphorylase superfamily LMD38_RS05140 PF00291 Pyridoxal-phosphate dependent enzyme LMD38_RS05145 PF01053 Cys/Met metabolism PLP-dependent enzyme LMD38_RS05150 PF00171 Aldehyde dehydrogenase family LMD38_RS05150 PF00465 Iron-containing alcohol dehydrogenase LMD38_RS05160 PF01497 Periplasmic binding protein LMD38_RS05165 PF01032 FecCD transport family LMD38_RS05170 PF00005 ABC transporter LMD38_RS05200 PF07681 DoxX LMD38_RS05205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS05215 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LMD38_RS05220 PF13860 FlgD Ig-like domain LMD38_RS05220 PF05922 Peptidase inhibitor I9 LMD38_RS05220 PF02225 PA domain LMD38_RS05220 PF00082 Subtilase family LMD38_RS05255 PF00561 alpha/beta hydrolase fold LMD38_RS05255 PF08386 TAP-like protein LMD38_RS05265 PF00245 Alkaline phosphatase LMD38_RS05275 PF04607 Region found in RelA / SpoT proteins LMD38_RS05280 PF00471 Ribosomal protein L33 LMD38_RS05295 PF04542 Sigma-70 region 2 LMD38_RS05295 PF04545 Sigma-70, region 4 LMD38_RS05300 PF02666 Phosphatidylserine decarboxylase LMD38_RS05315 PF01926 50S ribosome-binding GTPase LMD38_RS05320 PF08501 Shikimate dehydrogenase substrate binding domain LMD38_RS05320 PF01488 Shikimate / quinate 5-dehydrogenase LMD38_RS05320 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LMD38_RS05325 PF01985 CRS1 / YhbY (CRM) domain LMD38_RS05330 PF01467 Cytidylyltransferase-like LMD38_RS05335 PF01966 HD domain LMD38_RS05345 PF13649 Methyltransferase domain LMD38_RS05350 PF14748 Pyrroline-5-carboxylate reductase dimerisation LMD38_RS05350 PF03807 NADP oxidoreductase coenzyme F420-dependent LMD38_RS05355 PF10531 SLBB domain LMD38_RS05360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMD38_RS05365 PF00753 Metallo-beta-lactamase superfamily LMD38_RS05365 PF03772 Competence protein LMD38_RS05365 PF13567 Domain of unknown function (DUF4131) LMD38_RS05370 PF14141 YqzM-like protein LMD38_RS05375 PF06144 DNA polymerase III, delta subunit LMD38_RS05380 PF01649 Ribosomal protein S20 LMD38_RS05385 PF03418 Germination protease LMD38_RS05395 PF00679 Elongation factor G C-terminus LMD38_RS05395 PF00009 Elongation factor Tu GTP binding domain LMD38_RS05395 PF03144 Elongation factor Tu domain 2 LMD38_RS05395 PF06421 GTP-binding protein LepA C-terminus LMD38_RS05400 PF01638 HxlR-like helix-turn-helix LMD38_RS05405 PF06969 HemN C-terminal domain LMD38_RS05405 PF04055 Radical SAM superfamily LMD38_RS05410 PF01628 HrcA protein C terminal domain LMD38_RS05415 PF01025 GrpE LMD38_RS05420 PF00012 Hsp70 protein LMD38_RS05425 PF00684 DnaJ central domain LMD38_RS05425 PF01556 DnaJ C terminal domain LMD38_RS05425 PF00226 DnaJ domain LMD38_RS05435 PF04452 RNA methyltransferase LMD38_RS05440 PF04055 Radical SAM superfamily LMD38_RS05440 PF00919 Uncharacterized protein family UPF0004 LMD38_RS05440 PF01938 TRAM domain LMD38_RS05445 PF01165 Ribosomal protein S21 LMD38_RS05450 PF09424 Yqey-like protein LMD38_RS05455 PF07873 YabP family LMD38_RS05460 PF06898 Putative stage IV sporulation protein YqfD LMD38_RS05465 PF02562 PhoH-like protein LMD38_RS05470 PF07698 7TM receptor with intracellular HD hydrolase LMD38_RS05470 PF07697 7TM-HD extracellular LMD38_RS05470 PF01966 HD domain LMD38_RS05475 PF02130 Uncharacterized protein family UPF0054 LMD38_RS05480 PF01219 Prokaryotic diacylglycerol kinase LMD38_RS05485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMD38_RS05490 PF01926 50S ribosome-binding GTPase LMD38_RS05490 PF07650 KH domain LMD38_RS05500 PF02565 Recombination protein O C terminal LMD38_RS05500 PF11967 Recombination protein O N terminal LMD38_RS05505 PF00571 CBS domain LMD38_RS05505 PF08279 HTH domain LMD38_RS05510 PF03618 Kinase/pyrophosphorylase LMD38_RS05515 PF10410 DnaB-helicase binding domain of primase LMD38_RS05515 PF08275 DNA primase catalytic core, N-terminal domain LMD38_RS05515 PF01807 CHC2 zinc finger LMD38_RS05520 PF04545 Sigma-70, region 4 LMD38_RS05520 PF04539 Sigma-70 region 3 LMD38_RS05520 PF00140 Sigma-70 factor, region 1.2 LMD38_RS05520 PF04542 Sigma-70 region 2 LMD38_RS05520 PF03979 Sigma-70 factor, region 1.1 LMD38_RS05525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LMD38_RS05530 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LMD38_RS05535 PF01784 NIF3 (NGG1p interacting factor 3) LMD38_RS05540 PF02401 LytB protein LMD38_RS05550 PF00270 DEAD/DEAH box helicase LMD38_RS05550 PF00271 Helicase conserved C-terminal domain LMD38_RS05555 PF01261 Xylose isomerase-like TIM barrel LMD38_RS05560 PF11116 Protein of unknown function (DUF2624) LMD38_RS05565 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS05565 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LMD38_RS05570 PF00005 ABC transporter LMD38_RS05575 PF00950 ABC 3 transport family LMD38_RS05580 PF01475 Ferric uptake regulator family LMD38_RS05585 PF04551 GcpE protein LMD38_RS05605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LMD38_RS05605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LMD38_RS05610 PF07690 Major Facilitator Superfamily LMD38_RS05615 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS05615 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS05620 PF12849 PBP superfamily domain LMD38_RS05625 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS05630 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS05635 PF00005 ABC transporter LMD38_RS05640 PF01895 PhoU domain LMD38_RS05645 PF00483 Nucleotidyl transferase LMD38_RS05650 PF00471 Ribosomal protein L33 LMD38_RS05655 PF01812 5-formyltetrahydrofolate cyclo-ligase family LMD38_RS05660 PF06014 Bacterial protein of unknown function (DUF910) LMD38_RS05665 PF00480 ROK family LMD38_RS05670 PF10958 Protein of unknown function (DUF2759) LMD38_RS05675 PF00753 Metallo-beta-lactamase superfamily LMD38_RS05685 PF01022 Bacterial regulatory protein, arsR family LMD38_RS05695 PF01053 Cys/Met metabolism PLP-dependent enzyme LMD38_RS05700 PF01053 Cys/Met metabolism PLP-dependent enzyme LMD38_RS05705 PF02574 Homocysteine S-methyltransferase LMD38_RS05705 PF02219 Methylenetetrahydrofolate reductase LMD38_RS05710 PF02310 B12 binding domain LMD38_RS05710 PF02607 B12 binding domain LMD38_RS05710 PF02965 Vitamin B12 dependent methionine synthase, activation domain LMD38_RS05710 PF00809 Pterin binding enzyme LMD38_RS05710 PF02574 Homocysteine S-methyltransferase LMD38_RS05715 PF04101 Glycosyltransferase family 28 C-terminal domain LMD38_RS05715 PF03033 Glycosyltransferase family 28 N-terminal domain LMD38_RS05750 PF00375 Sodium:dicarboxylate symporter family LMD38_RS05755 PF11117 Protein of unknown function (DUF2626) LMD38_RS05765 PF00437 Type II/IV secretion system protein LMD38_RS05770 PF00482 Type II secretion system (T2SS), protein F LMD38_RS05780 PF07963 Prokaryotic N-terminal methylation motif LMD38_RS05805 PF01202 Shikimate kinase LMD38_RS05810 PF14038 YqzE-like protein LMD38_RS05840 PF11079 Bacterial protein YqhG of unknown function LMD38_RS05845 PF00271 Helicase conserved C-terminal domain LMD38_RS05845 PF00176 SNF2 family N-terminal domain LMD38_RS05850 PF01571 Aminomethyltransferase folate-binding domain LMD38_RS05850 PF08669 Glycine cleavage T-protein C-terminal barrel domain LMD38_RS05855 PF02347 Glycine cleavage system P-protein LMD38_RS05860 PF02347 Glycine cleavage system P-protein LMD38_RS05875 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS05880 PF00005 ABC transporter LMD38_RS05920 PF00893 Small Multidrug Resistance protein LMD38_RS05925 PF00893 Small Multidrug Resistance protein LMD38_RS05935 PF00356 Bacterial regulatory proteins, lacI family LMD38_RS05935 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LMD38_RS05940 PF00581 Rhodanese-like domain LMD38_RS05945 PF03099 Biotin/lipoate A/B protein ligase family LMD38_RS05960 PF01325 Iron dependent repressor, N-terminal DNA binding domain LMD38_RS05960 PF02742 Iron dependent repressor, metal binding and dimerisation domain LMD38_RS05965 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS05975 PF07136 Protein of unknown function (DUF1385) LMD38_RS05980 PF11085 Conserved membrane protein YqhR LMD38_RS05985 PF01220 Dehydroquinase class II LMD38_RS05990 PF01321 Creatinase/Prolidase N-terminal domain LMD38_RS05990 PF00557 Metallopeptidase family M24 LMD38_RS05995 PF08207 Elongation factor P (EF-P) KOW-like domain LMD38_RS05995 PF09285 Elongation factor P, C-terminal LMD38_RS05995 PF01132 Elongation factor P (EF-P) OB domain LMD38_RS06020 PF09548 Stage III sporulation protein AB (spore_III_AB) LMD38_RS06025 PF06686 Stage III sporulation protein AC/AD protein family LMD38_RS06030 PF06686 Stage III sporulation protein AC/AD protein family LMD38_RS06035 PF09546 Stage III sporulation protein AE (spore_III_AE) LMD38_RS06040 PF09581 Stage III sporulation protein AF (Spore_III_AF) LMD38_RS06050 PF12685 SpoIIIAH-like protein LMD38_RS06060 PF00364 Biotin-requiring enzyme LMD38_RS06065 PF00289 Biotin carboxylase, N-terminal domain LMD38_RS06065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMD38_RS06065 PF02785 Biotin carboxylase C-terminal domain LMD38_RS06070 PF03780 Asp23 family, cell envelope-related function LMD38_RS06075 PF01029 NusB family LMD38_RS06080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LMD38_RS06080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LMD38_RS06085 PF02601 Exonuclease VII, large subunit LMD38_RS06085 PF13742 OB-fold nucleic acid binding domain LMD38_RS06090 PF02609 Exonuclease VII small subunit LMD38_RS06095 PF00348 Polyprenyl synthetase LMD38_RS06100 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LMD38_RS06100 PF02780 Transketolase, C-terminal domain LMD38_RS06100 PF02779 Transketolase, pyrimidine binding domain LMD38_RS06105 PF01728 FtsJ-like methyltransferase LMD38_RS06105 PF01479 S4 domain LMD38_RS06110 PF01316 Arginine repressor, DNA binding domain LMD38_RS06110 PF02863 Arginine repressor, C-terminal domain LMD38_RS06115 PF13476 AAA domain LMD38_RS06120 PF05580 SpoIVB peptidase S55 LMD38_RS06120 PF17820 PDZ domain LMD38_RS06125 PF00072 Response regulator receiver domain LMD38_RS06125 PF08769 Sporulation initiation factor Spo0A C terminal LMD38_RS06140 PF01541 GIY-YIG catalytic domain LMD38_RS06140 PF08459 UvrC Helix-hairpin-helix N-terminal LMD38_RS06205 PF02796 Helix-turn-helix domain of resolvase LMD38_RS06205 PF00239 Resolvase, N terminal domain LMD38_RS06225 PF14174 YycC-like protein LMD38_RS06230 PF03009 Glycerophosphoryl diester phosphodiesterase family LMD38_RS06235 PF11118 Protein of unknown function (DUF2627) LMD38_RS06240 PF00989 PAS fold LMD38_RS06240 PF02954 Bacterial regulatory protein, Fis family LMD38_RS06240 PF00158 Sigma-54 interaction domain LMD38_RS06245 PF01515 Phosphate acetyl/butaryl transferase LMD38_RS06250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LMD38_RS06250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LMD38_RS06255 PF00871 Acetokinase family LMD38_RS06260 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS06260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMD38_RS06265 PF00676 Dehydrogenase E1 component LMD38_RS06270 PF02779 Transketolase, pyrimidine binding domain LMD38_RS06270 PF02780 Transketolase, C-terminal domain LMD38_RS06275 PF00364 Biotin-requiring enzyme LMD38_RS06275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LMD38_RS06275 PF02817 e3 binding domain LMD38_RS06280 PF01098 Cell cycle protein LMD38_RS06285 PF04239 Protein of unknown function (DUF421) LMD38_RS06290 PF09297 NADH pyrophosphatase zinc ribbon domain LMD38_RS06290 PF00293 NUDIX domain LMD38_RS06295 PF11208 Protein of unknown function (DUF2992) LMD38_RS06300 PF06491 Disulphide isomerase LMD38_RS06305 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMD38_RS06310 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS06315 PF00005 ABC transporter LMD38_RS06320 PF06081 Aromatic acid exporter family member 1 LMD38_RS06320 PF11728 Putative aromatic acid exporter C-terminal domain LMD38_RS06325 PF03734 L,D-transpeptidase catalytic domain LMD38_RS06340 PF13302 Acetyltransferase (GNAT) domain LMD38_RS06345 PF01546 Peptidase family M20/M25/M40 LMD38_RS06345 PF07687 Peptidase dimerisation domain LMD38_RS06355 PF00817 impB/mucB/samB family LMD38_RS06355 PF11799 impB/mucB/samB family C-terminal domain LMD38_RS06355 PF11798 IMS family HHH motif LMD38_RS06360 PF02308 MgtC family LMD38_RS06365 PF00689 Cation transporting ATPase, C-terminus LMD38_RS06365 PF00690 Cation transporter/ATPase, N-terminus LMD38_RS06375 PF00753 Metallo-beta-lactamase superfamily LMD38_RS06375 PF12706 Beta-lactamase superfamily domain LMD38_RS06385 PF01842 ACT domain LMD38_RS06385 PF03315 Serine dehydratase beta chain LMD38_RS06390 PF03313 Serine dehydratase alpha chain LMD38_RS06395 PF03807 NADP oxidoreductase coenzyme F420-dependent LMD38_RS06395 PF14748 Pyrroline-5-carboxylate reductase dimerisation LMD38_RS06400 PF00753 Metallo-beta-lactamase superfamily LMD38_RS06405 PF00106 short chain dehydrogenase LMD38_RS06415 PF02774 Semialdehyde dehydrogenase, dimerisation domain LMD38_RS06415 PF01118 Semialdehyde dehydrogenase, NAD binding domain LMD38_RS06420 PF01960 ArgJ family LMD38_RS06425 PF00696 Amino acid kinase family LMD38_RS06430 PF00202 Aminotransferase class-III LMD38_RS06435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LMD38_RS06435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LMD38_RS06450 PF01037 Lrp/AsnC ligand binding domain LMD38_RS06450 PF13404 AsnC-type helix-turn-helix domain LMD38_RS06460 PF00149 Calcineurin-like phosphoesterase LMD38_RS06460 PF02872 5'-nucleotidase, C-terminal domain LMD38_RS06465 PF03553 Na+/H+ antiporter family LMD38_RS06475 PF00202 Aminotransferase class-III LMD38_RS06485 PF00155 Aminotransferase class I and II LMD38_RS06490 PF12697 Alpha/beta hydrolase family LMD38_RS06490 PF08241 Methyltransferase domain LMD38_RS06495 PF13847 Methyltransferase domain LMD38_RS06500 PF06968 Biotin and Thiamin Synthesis associated domain LMD38_RS06500 PF04055 Radical SAM superfamily LMD38_RS06510 PF00885 6,7-dimethyl-8-ribityllumazine synthase LMD38_RS06515 PF00925 GTP cyclohydrolase II LMD38_RS06515 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LMD38_RS06520 PF00677 Lumazine binding domain LMD38_RS06525 PF01872 RibD C-terminal domain LMD38_RS06525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMD38_RS06535 PF10827 Protein of unknown function (DUF2552) LMD38_RS06540 PF12146 Serine aminopeptidase, S33 LMD38_RS06545 PF00583 Acetyltransferase (GNAT) family LMD38_RS06550 PF00356 Bacterial regulatory proteins, lacI family LMD38_RS06555 PF13726 Na+-H+ antiporter family LMD38_RS06555 PF03553 Na+/H+ antiporter family LMD38_RS06560 PF12146 Serine aminopeptidase, S33 LMD38_RS06570 PF00149 Calcineurin-like phosphoesterase LMD38_RS06570 PF02872 5'-nucleotidase, C-terminal domain LMD38_RS06570 PF00746 LPXTG cell wall anchor motif LMD38_RS06570 PF00565 Staphylococcal nuclease homologue LMD38_RS06580 PF04229 GrpB protein LMD38_RS06580 PF13673 Acetyltransferase (GNAT) domain LMD38_RS06585 PF00248 Aldo/keto reductase family LMD38_RS06590 PF00248 Aldo/keto reductase family LMD38_RS06595 PF13072 Mother cell inhibitor of FtsZ LMD38_RS06600 PF00293 NUDIX domain LMD38_RS06610 PF01944 Stage II sporulation protein M LMD38_RS06615 PF01475 Ferric uptake regulator family LMD38_RS06620 PF14004 Protein of unknown function (DUF4227) LMD38_RS06625 PF00589 Phage integrase family LMD38_RS06625 PF02899 Phage integrase, N-terminal SAM-like domain LMD38_RS06635 PF01676 Metalloenzyme superfamily LMD38_RS06640 PF01048 Phosphorylase superfamily LMD38_RS06645 PF02885 Glycosyl transferase family, helical bundle domain LMD38_RS06645 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LMD38_RS06645 PF00591 Glycosyl transferase family, a/b domain LMD38_RS06650 PF01544 CorA-like Mg2+ transporter protein LMD38_RS06655 PF00860 Permease family LMD38_RS06665 PF01047 MarR family LMD38_RS06680 PF00005 ABC transporter LMD38_RS06685 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS06690 PF07943 Penicillin-binding protein 5, C-terminal domain LMD38_RS06690 PF00768 D-alanyl-D-alanine carboxypeptidase LMD38_RS06695 PF01740 STAS domain LMD38_RS06700 PF13581 Histidine kinase-like ATPase domain LMD38_RS06705 PF04542 Sigma-70 region 2 LMD38_RS06705 PF04539 Sigma-70 region 3 LMD38_RS06705 PF04545 Sigma-70, region 4 LMD38_RS06710 PF00209 Sodium:neurotransmitter symporter family LMD38_RS06720 PF12164 Stage V sporulation protein AA LMD38_RS06725 PF13782 Stage V sporulation protein AB LMD38_RS06730 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LMD38_RS06735 PF07451 Stage V sporulation protein AD (SpoVAD) LMD38_RS06740 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LMD38_RS06745 PF14097 Stage V sporulation protein AE1 LMD38_RS06750 PF03323 Bacillus/Clostridium GerA spore germination protein LMD38_RS06765 PF06207 Protein of unknown function (DUF1002) LMD38_RS06770 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LMD38_RS06780 PF00583 Acetyltransferase (GNAT) family LMD38_RS06785 PF03745 Domain of unknown function (DUF309) LMD38_RS06795 PF02616 Segregation and condensation protein ScpA LMD38_RS06800 PF04079 Segregation and condensation complex subunit ScpB LMD38_RS06810 PF01979 Amidohydrolase family LMD38_RS06815 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LMD38_RS06820 PF07702 UTRA domain LMD38_RS06820 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS06830 PF03123 CAT RNA binding domain LMD38_RS06830 PF00874 PRD domain LMD38_RS06835 PF02378 Phosphotransferase system, EIIC LMD38_RS06835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LMD38_RS06835 PF00367 phosphotransferase system, EIIB LMD38_RS06840 PF00381 PTS HPr component phosphorylation site LMD38_RS06845 PF00391 PEP-utilising enzyme, mobile domain LMD38_RS06845 PF05524 PEP-utilising enzyme, N-terminal LMD38_RS06845 PF02896 PEP-utilising enzyme, TIM barrel domain LMD38_RS06860 PF00881 Nitroreductase family LMD38_RS06865 PF00990 Diguanylate cyclase, GGDEF domain LMD38_RS06865 PF08448 PAS fold LMD38_RS06870 PF00144 Beta-lactamase LMD38_RS06875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LMD38_RS06875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LMD38_RS06890 PF03079 ARD/ARD' family LMD38_RS06895 PF00596 Class II Aldolase and Adducin N-terminal domain LMD38_RS06905 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LMD38_RS06905 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LMD38_RS06910 PF00155 Aminotransferase class I and II LMD38_RS06915 PF00795 Carbon-nitrogen hydrolase LMD38_RS06920 PF01636 Phosphotransferase enzyme family LMD38_RS06925 PF01008 Initiation factor 2 subunit family LMD38_RS06945 PF03551 Transcriptional regulator PadR-like family LMD38_RS06975 PF00293 NUDIX domain LMD38_RS06980 PF02803 Thiolase, C-terminal domain LMD38_RS06980 PF00108 Thiolase, N-terminal domain LMD38_RS06985 PF02463 RecF/RecN/SMC N terminal domain LMD38_RS07025 PF00005 ABC transporter LMD38_RS07025 PF17912 MalK OB fold domain LMD38_RS07025 PF03459 TOBE domain LMD38_RS07030 PF00128 Alpha amylase, catalytic domain LMD38_RS07030 PF16657 Maltogenic Amylase, C-terminal domain LMD38_RS07035 PF00128 Alpha amylase, catalytic domain LMD38_RS07035 PF02903 Alpha amylase, N-terminal ig-like domain LMD38_RS07035 PF16657 Maltogenic Amylase, C-terminal domain LMD38_RS07040 PF13416 Bacterial extracellular solute-binding protein LMD38_RS07045 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS07050 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS07055 PF00356 Bacterial regulatory proteins, lacI family LMD38_RS07055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LMD38_RS07060 PF00155 Aminotransferase class I and II LMD38_RS07070 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS07070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS07080 PF14040 Deoxyribonuclease NucA/NucB LMD38_RS07090 PF08267 Cobalamin-independent synthase, N-terminal domain LMD38_RS07090 PF01717 Cobalamin-independent synthase, Catalytic domain LMD38_RS07100 PF01609 Transposase DDE domain LMD38_RS07105 PF07690 Major Facilitator Superfamily LMD38_RS07130 PF14177 YkyB-like protein LMD38_RS07135 PF02541 Ppx/GppA phosphatase family LMD38_RS07140 PF13089 Polyphosphate kinase N-terminal domain LMD38_RS07140 PF17941 Polyphosphate kinase C-terminal domain 1 LMD38_RS07140 PF02503 Polyphosphate kinase middle domain LMD38_RS07140 PF13090 Polyphosphate kinase C-terminal domain 2 LMD38_RS07150 PF00149 Calcineurin-like phosphoesterase LMD38_RS07150 PF10518 TAT (twin-arginine translocation) pathway signal sequence LMD38_RS07160 PF00563 EAL domain LMD38_RS07160 PF10388 EAL-domain associated signalling protein domain LMD38_RS07175 PF08796 Protein of unknown function (DUF1797) LMD38_RS07185 PF04308 Ribonuclease H-like LMD38_RS07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS07200 PF03466 LysR substrate binding domain LMD38_RS07205 PF14602 Hexapeptide repeat of succinyl-transferase LMD38_RS07205 PF00132 Bacterial transferase hexapeptide (six repeats) LMD38_RS07205 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LMD38_RS07210 PF07687 Peptidase dimerisation domain LMD38_RS07210 PF01546 Peptidase family M20/M25/M40 LMD38_RS07220 PF02080 TrkA-C domain LMD38_RS07220 PF02254 TrkA-N domain LMD38_RS07225 PF17770 Ribonuclease J C-terminal domain LMD38_RS07225 PF00753 Metallo-beta-lactamase superfamily LMD38_RS07225 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LMD38_RS07230 PF07288 Protein of unknown function (DUF1447) LMD38_RS07240 PF01327 Polypeptide deformylase LMD38_RS07250 PF00676 Dehydrogenase E1 component LMD38_RS07255 PF02779 Transketolase, pyrimidine binding domain LMD38_RS07255 PF02780 Transketolase, C-terminal domain LMD38_RS07260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LMD38_RS07260 PF00364 Biotin-requiring enzyme LMD38_RS07260 PF02817 e3 binding domain LMD38_RS07265 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS07265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMD38_RS07305 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LMD38_RS07305 PF01276 Orn/Lys/Arg decarboxylase, major domain LMD38_RS07310 PF05256 Uncharacterised protein family (UPF0223) LMD38_RS07315 PF06335 Protein of unknown function (DUF1054) LMD38_RS07325 PF00459 Inositol monophosphatase family LMD38_RS07335 PF00679 Elongation factor G C-terminus LMD38_RS07335 PF14492 Elongation Factor G, domain II LMD38_RS07335 PF00009 Elongation factor Tu GTP binding domain LMD38_RS07335 PF03144 Elongation factor Tu domain 2 LMD38_RS07340 PF14036 YlaH-like protein LMD38_RS07350 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LMD38_RS07360 PF02562 PhoH-like protein LMD38_RS07360 PF13638 PIN domain LMD38_RS07370 PF07408 Protein of unknown function (DUF1507) LMD38_RS07375 PF01098 Cell cycle protein LMD38_RS07380 PF00364 Biotin-requiring enzyme LMD38_RS07380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMD38_RS07380 PF00289 Biotin carboxylase, N-terminal domain LMD38_RS07380 PF00682 HMGL-like LMD38_RS07380 PF02436 Conserved carboxylase domain LMD38_RS07380 PF02785 Biotin carboxylase C-terminal domain LMD38_RS07385 PF02628 Cytochrome oxidase assembly protein LMD38_RS07390 PF01040 UbiA prenyltransferase family LMD38_RS07395 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LMD38_RS07395 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LMD38_RS07395 PF00034 Cytochrome c LMD38_RS07400 PF00115 Cytochrome C and Quinol oxidase polypeptide I LMD38_RS07405 PF00510 Cytochrome c oxidase subunit III LMD38_RS07410 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LMD38_RS07415 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LMD38_RS07425 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LMD38_RS07435 PF08868 YugN-like family LMD38_RS07440 PF00188 Cysteine-rich secretory protein family LMD38_RS07440 PF14504 CAP-associated N-terminal LMD38_RS07445 PF14071 Putative coat protein LMD38_RS07450 PF14003 YlbE-like protein LMD38_RS07455 PF00300 Histidine phosphatase superfamily (branch 1) LMD38_RS07460 PF06133 Control of competence regulator ComK, YlbF/YmcA LMD38_RS07465 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LMD38_RS07480 PF01467 Cytidylyltransferase-like LMD38_RS07485 PF07670 Nucleoside recognition LMD38_RS07490 PF01734 Patatin-like phospholipase LMD38_RS07495 PF05362 Lon protease (S16) C-terminal proteolytic domain LMD38_RS07495 PF13180 PDZ domain LMD38_RS07500 PF05636 HIGH Nucleotidyl Transferase LMD38_RS07505 PF02620 Large ribosomal RNA subunit accumulation protein YceD LMD38_RS07510 PF01783 Ribosomal L32p protein family LMD38_RS07520 PF00583 Acetyltransferase (GNAT) family LMD38_RS07525 PF08546 Ketopantoate reductase PanE/ApbA C terminal LMD38_RS07525 PF02558 Ketopantoate reductase PanE/ApbA LMD38_RS07530 PF10079 Bacillithiol biosynthesis BshC LMD38_RS07535 PF01795 MraW methylase family LMD38_RS07540 PF04977 Septum formation initiator LMD38_RS07545 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS07545 PF03793 PASTA domain LMD38_RS07545 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS07550 PF03793 PASTA domain LMD38_RS07550 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS07550 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS07555 PF01225 Mur ligase family, catalytic domain LMD38_RS07555 PF02875 Mur ligase family, glutamate ligase domain LMD38_RS07555 PF08245 Mur ligase middle domain LMD38_RS07560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LMD38_RS07560 PF00953 Glycosyl transferase family 4 LMD38_RS07565 PF02875 Mur ligase family, glutamate ligase domain LMD38_RS07565 PF08245 Mur ligase middle domain LMD38_RS07570 PF01098 Cell cycle protein LMD38_RS07575 PF04101 Glycosyltransferase family 28 C-terminal domain LMD38_RS07575 PF03033 Glycosyltransferase family 28 N-terminal domain LMD38_RS07580 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LMD38_RS07580 PF01565 FAD binding domain LMD38_RS07585 PF03799 Cell division protein FtsQ LMD38_RS07585 PF08478 POTRA domain, FtsQ-type LMD38_RS07590 PF02491 SHS2 domain inserted in FTSA LMD38_RS07595 PF12327 FtsZ family, C-terminal domain LMD38_RS07595 PF00091 Tubulin/FtsZ family, GTPase domain LMD38_RS07600 PF03419 Sporulation factor SpoIIGA LMD38_RS07605 PF04545 Sigma-70, region 4 LMD38_RS07605 PF04542 Sigma-70 region 2 LMD38_RS07610 PF04545 Sigma-70, region 4 LMD38_RS07610 PF04539 Sigma-70 region 3 LMD38_RS07610 PF04542 Sigma-70 region 2 LMD38_RS07615 PF05239 PRC-barrel domain LMD38_RS07620 PF02578 Multi-copper polyphenol oxidoreductase laccase LMD38_RS07625 PF01168 Alanine racemase, N-terminal domain LMD38_RS07630 PF04472 Cell division protein SepF LMD38_RS07635 PF02325 YGGT family LMD38_RS07640 PF01479 S4 domain LMD38_RS07640 PF17774 Putative RNA-binding domain in YlmH LMD38_RS07645 PF05103 DivIVA protein LMD38_RS07650 PF00133 tRNA synthetases class I (I, L, M and V) LMD38_RS07650 PF06827 Zinc finger found in FPG and IleRS LMD38_RS07650 PF08264 Anticodon-binding domain of tRNA LMD38_RS07660 PF01252 Signal peptidase (SPase) II LMD38_RS07665 PF01479 S4 domain LMD38_RS07665 PF00849 RNA pseudouridylate synthase LMD38_RS07670 PF00156 Phosphoribosyl transferase domain LMD38_RS07675 PF00860 Permease family LMD38_RS07680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LMD38_RS07680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LMD38_RS07685 PF01979 Amidohydrolase family LMD38_RS07690 PF00117 Glutamine amidotransferase class-I LMD38_RS07690 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LMD38_RS07695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMD38_RS07695 PF02142 MGS-like domain LMD38_RS07695 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LMD38_RS07700 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LMD38_RS07700 PF00175 Oxidoreductase NAD-binding domain LMD38_RS07705 PF01180 Dihydroorotate dehydrogenase LMD38_RS07710 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LMD38_RS07715 PF00156 Phosphoribosyl transferase domain LMD38_RS07740 PF00557 Metallopeptidase family M24 LMD38_RS07740 PF01321 Creatinase/Prolidase N-terminal domain LMD38_RS07750 PF05670 NFACT protein RNA binding domain LMD38_RS07755 PF00690 Cation transporter/ATPase, N-terminus LMD38_RS07755 PF00689 Cation transporting ATPase, C-terminus LMD38_RS07760 PF03755 YicC-like family, N-terminal region LMD38_RS07760 PF08340 Domain of unknown function (DUF1732) LMD38_RS07765 PF04025 Domain of unknown function (DUF370) LMD38_RS07770 PF00625 Guanylate kinase LMD38_RS07775 PF01192 RNA polymerase Rpb6 LMD38_RS07780 PF02441 Flavoprotein LMD38_RS07780 PF04127 DNA / pantothenate metabolism flavoprotein LMD38_RS07785 PF18074 Primosomal protein N C-terminal domain LMD38_RS07785 PF04851 Type III restriction enzyme, res subunit LMD38_RS07785 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LMD38_RS07785 PF00271 Helicase conserved C-terminal domain LMD38_RS07785 PF17764 3′ DNA-binding domain (3′BD) LMD38_RS07790 PF01327 Polypeptide deformylase LMD38_RS07795 PF02911 Formyl transferase, C-terminal domain LMD38_RS07795 PF00551 Formyl transferase LMD38_RS07800 PF01029 NusB family LMD38_RS07800 PF01189 16S rRNA methyltransferase RsmB/F LMD38_RS07805 PF04055 Radical SAM superfamily LMD38_RS07815 PF03793 PASTA domain LMD38_RS07815 PF00069 Protein kinase domain LMD38_RS07820 PF16745 RsgA N-terminal domain LMD38_RS07820 PF03193 RsgA GTPase LMD38_RS07825 PF00834 Ribulose-phosphate 3 epimerase family LMD38_RS07830 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LMD38_RS07830 PF04263 Thiamin pyrophosphokinase, catalytic domain LMD38_RS07835 PF08183 Stage V sporulation protein family LMD38_RS07840 PF00830 Ribosomal L28 family LMD38_RS07845 PF03780 Asp23 family, cell envelope-related function LMD38_RS07850 PF02734 DAK2 domain LMD38_RS07850 PF13684 Dihydroxyacetone kinase family LMD38_RS07855 PF17191 RecG wedge domain LMD38_RS07855 PF00271 Helicase conserved C-terminal domain LMD38_RS07855 PF00270 DEAD/DEAH box helicase LMD38_RS07860 PF03061 Thioesterase superfamily LMD38_RS07865 PF02504 Fatty acid synthesis protein LMD38_RS07870 PF00698 Acyl transferase domain LMD38_RS07880 PF00550 Phosphopantetheine attachment site LMD38_RS07885 PF14622 Ribonuclease-III-like LMD38_RS07885 PF00035 Double-stranded RNA binding motif LMD38_RS07890 PF06470 SMC proteins Flexible Hinge Domain LMD38_RS07890 PF02463 RecF/RecN/SMC N terminal domain LMD38_RS07895 PF02881 SRP54-type protein, helical bundle domain LMD38_RS07895 PF00448 SRP54-type protein, GTPase domain LMD38_RS07900 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LMD38_RS07905 PF00448 SRP54-type protein, GTPase domain LMD38_RS07905 PF02881 SRP54-type protein, helical bundle domain LMD38_RS07905 PF02978 Signal peptide binding domain LMD38_RS07910 PF00886 Ribosomal protein S16 LMD38_RS07920 PF01782 RimM N-terminal domain LMD38_RS07920 PF05239 PRC-barrel domain LMD38_RS07925 PF01746 tRNA (Guanine-1)-methyltransferase LMD38_RS07930 PF01245 Ribosomal protein L19 LMD38_RS07935 PF10502 Signal peptidase, peptidase S26 LMD38_RS07940 PF01926 50S ribosome-binding GTPase LMD38_RS07945 PF01351 Ribonuclease HII LMD38_RS07950 PF08442 ATP-grasp domain LMD38_RS07950 PF00549 CoA-ligase LMD38_RS07955 PF02629 CoA binding domain LMD38_RS07955 PF00549 CoA-ligase LMD38_RS07960 PF02481 DNA recombination-mediator protein A LMD38_RS07965 PF01751 Toprim domain LMD38_RS07965 PF01396 Topoisomerase DNA binding C4 zinc finger LMD38_RS07965 PF01131 DNA topoisomerase LMD38_RS07970 PF01134 Glucose inhibited division protein A LMD38_RS07975 PF02899 Phage integrase, N-terminal SAM-like domain LMD38_RS07975 PF00589 Phage integrase family LMD38_RS07980 PF00227 Proteasome subunit LMD38_RS07985 PF10431 C-terminal, D2-small domain, of ClpB protein LMD38_RS07985 PF07724 AAA domain (Cdc48 subfamily) LMD38_RS07985 PF00004 ATPase family associated with various cellular activities (AAA) LMD38_RS07990 PF08222 CodY helix-turn-helix domain LMD38_RS07990 PF06018 CodY GAF-like domain LMD38_RS07995 PF00318 Ribosomal protein S2 LMD38_RS08000 PF00889 Elongation factor TS LMD38_RS08005 PF00696 Amino acid kinase family LMD38_RS08010 PF01765 Ribosome recycling factor LMD38_RS08015 PF01255 Putative undecaprenyl diphosphate synthase LMD38_RS08025 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LMD38_RS08025 PF13288 DXP reductoisomerase C-terminal domain LMD38_RS08025 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LMD38_RS08030 PF02163 Peptidase family M50 LMD38_RS08030 PF17820 PDZ domain LMD38_RS08035 PF04073 Aminoacyl-tRNA editing domain LMD38_RS08035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMD38_RS08035 PF03129 Anticodon binding domain LMD38_RS08040 PF14480 DNA polymerase III polC-type N-terminus I LMD38_RS08040 PF07733 Bacterial DNA polymerase III alpha NTPase domain LMD38_RS08040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LMD38_RS08040 PF14579 Helix-hairpin-helix motif LMD38_RS08040 PF02811 PHP domain LMD38_RS08040 PF00929 Exonuclease LMD38_RS08040 PF11490 DNA polymerase III polC-type N-terminus II LMD38_RS08045 PF02576 RimP N-terminal domain LMD38_RS08045 PF17384 RimP C-terminal SH3 domain LMD38_RS08050 PF13184 NusA-like KH domain LMD38_RS08050 PF08529 NusA N-terminal domain LMD38_RS08050 PF00575 S1 RNA binding domain LMD38_RS08055 PF04296 Protein of unknown function (DUF448) LMD38_RS08060 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LMD38_RS08065 PF00009 Elongation factor Tu GTP binding domain LMD38_RS08065 PF11987 Translation-initiation factor 2 LMD38_RS08065 PF04760 Translation initiation factor IF-2, N-terminal region LMD38_RS08070 PF04456 Protein of unknown function (DUF503) LMD38_RS08075 PF02033 Ribosome-binding factor A LMD38_RS08080 PF16198 tRNA pseudouridylate synthase B C-terminal domain LMD38_RS08080 PF01509 TruB family pseudouridylate synthase (N terminal domain) LMD38_RS08085 PF06574 FAD synthetase LMD38_RS08085 PF01687 Riboflavin kinase LMD38_RS08090 PF00312 Ribosomal protein S15 LMD38_RS08095 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LMD38_RS08095 PF01138 3' exoribonuclease family, domain 1 LMD38_RS08095 PF00013 KH domain LMD38_RS08095 PF03725 3' exoribonuclease family, domain 2 LMD38_RS08095 PF00575 S1 RNA binding domain LMD38_RS08100 PF01522 Polysaccharide deacetylase LMD38_RS08105 PF00675 Insulinase (Peptidase family M16) LMD38_RS08105 PF05193 Peptidase M16 inactive domain LMD38_RS08110 PF05239 PRC-barrel domain LMD38_RS08115 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LMD38_RS08115 PF16924 Dipicolinate synthase subunit A N-terminal domain LMD38_RS08120 PF02441 Flavoprotein LMD38_RS08125 PF01118 Semialdehyde dehydrogenase, NAD binding domain LMD38_RS08125 PF02774 Semialdehyde dehydrogenase, dimerisation domain LMD38_RS08130 PF00696 Amino acid kinase family LMD38_RS08130 PF13840 ACT domain LMD38_RS08135 PF00701 Dihydrodipicolinate synthetase family LMD38_RS08140 PF00753 Metallo-beta-lactamase superfamily LMD38_RS08140 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LMD38_RS08140 PF17770 Ribonuclease J C-terminal domain LMD38_RS08145 PF00574 Clp protease LMD38_RS08150 PF14035 YlzJ-like protein LMD38_RS08155 PF01580 FtsK/SpoIIIE family LMD38_RS08155 PF17854 FtsK alpha domain LMD38_RS08155 PF09397 Ftsk gamma domain LMD38_RS08160 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS08160 PF07702 UTRA domain LMD38_RS08165 PF02608 ABC transporter substrate-binding protein PnrA-like LMD38_RS08170 PF00005 ABC transporter LMD38_RS08175 PF02653 Branched-chain amino acid transport system / permease component LMD38_RS08180 PF02653 Branched-chain amino acid transport system / permease component LMD38_RS08185 PF05193 Peptidase M16 inactive domain LMD38_RS08190 PF00675 Insulinase (Peptidase family M16) LMD38_RS08190 PF05193 Peptidase M16 inactive domain LMD38_RS08200 PF11588 Protein of unknown function (DUF3243) LMD38_RS08205 PF11868 Protein of unknown function (DUF3388) LMD38_RS08210 PF13464 Domain of unknown function (DUF4115) LMD38_RS08215 PF01066 CDP-alcohol phosphatidyltransferase LMD38_RS08220 PF02464 Competence-damaged protein LMD38_RS08220 PF18146 Damage-inducible protein CinA KH domain LMD38_RS08220 PF00994 Probable molybdopterin binding domain LMD38_RS08235 PF01966 HD domain LMD38_RS08235 PF00013 KH domain LMD38_RS08235 PF12072 Domain of unknown function (DUF3552) LMD38_RS08240 PF13277 YmdB-like protein LMD38_RS08245 PF04232 Stage V sporulation protein S (SpoVS) LMD38_RS08250 PF01244 Membrane dipeptidase (Peptidase family M19) LMD38_RS08255 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LMD38_RS08255 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LMD38_RS08255 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LMD38_RS08260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMD38_RS08265 PF00919 Uncharacterized protein family UPF0004 LMD38_RS08265 PF04055 Radical SAM superfamily LMD38_RS08265 PF01938 TRAM domain LMD38_RS08270 PF06133 Control of competence regulator ComK, YlbF/YmcA LMD38_RS08275 PF10628 Outer spore coat protein E (CotE) LMD38_RS08280 PF01624 MutS domain I LMD38_RS08280 PF05188 MutS domain II LMD38_RS08280 PF05190 MutS family domain IV LMD38_RS08280 PF00488 MutS domain V LMD38_RS08280 PF05192 MutS domain III LMD38_RS08285 PF01119 DNA mismatch repair protein, C-terminal domain LMD38_RS08285 PF08676 MutL C terminal dimerisation domain LMD38_RS08290 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LMD38_RS08300 PF00350 Dynamin family LMD38_RS08305 PF00884 Sulfatase LMD38_RS08315 PF07486 Cell Wall Hydrolase LMD38_RS08320 PF00388 Phosphatidylinositol-specific phospholipase C, X domain LMD38_RS08335 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS08335 PF00155 Aminotransferase class I and II LMD38_RS08350 PF10787 Uncharacterised protein from bacillus cereus group LMD38_RS08375 PF03707 Bacterial signalling protein N terminal repeat LMD38_RS08375 PF00990 Diguanylate cyclase, GGDEF domain LMD38_RS08375 PF00563 EAL domain LMD38_RS08380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS08405 PF07687 Peptidase dimerisation domain LMD38_RS08405 PF01546 Peptidase family M20/M25/M40 LMD38_RS08410 PF00730 HhH-GPD superfamily base excision DNA repair protein LMD38_RS08410 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LMD38_RS08415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LMD38_RS08415 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LMD38_RS08420 PF12833 Helix-turn-helix domain LMD38_RS08420 PF02805 Metal binding domain of Ada LMD38_RS08430 PF01497 Periplasmic binding protein LMD38_RS08435 PF01032 FecCD transport family LMD38_RS08440 PF01032 FecCD transport family LMD38_RS08445 PF00005 ABC transporter LMD38_RS08450 PF00756 Putative esterase LMD38_RS08455 PF01022 Bacterial regulatory protein, arsR family LMD38_RS08460 PF00300 Histidine phosphatase superfamily (branch 1) LMD38_RS08470 PF16916 Dimerisation domain of Zinc Transporter LMD38_RS08470 PF01545 Cation efflux family LMD38_RS08480 PF02583 Metal-sensitive transcriptional repressor LMD38_RS08485 PF00403 Heavy-metal-associated domain LMD38_RS08490 PF00403 Heavy-metal-associated domain LMD38_RS08500 PF00216 Bacterial DNA-binding protein LMD38_RS08505 PF01226 Formate/nitrite transporter LMD38_RS08510 PF10518 TAT (twin-arginine translocation) pathway signal sequence LMD38_RS08510 PF00149 Calcineurin-like phosphoesterase LMD38_RS08515 PF00041 Fibronectin type III domain LMD38_RS08515 PF00704 Glycosyl hydrolases family 18 LMD38_RS08520 PF00324 Amino acid permease LMD38_RS08530 PF04238 Protein of unknown function (DUF420) LMD38_RS08535 PF00465 Iron-containing alcohol dehydrogenase LMD38_RS08540 PF00455 DeoR C terminal sensor domain LMD38_RS08540 PF08220 DeoR-like helix-turn-helix domain LMD38_RS08545 PF00294 pfkB family carbohydrate kinase LMD38_RS08550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LMD38_RS08550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LMD38_RS08555 PF06725 3D domain LMD38_RS08555 PF01476 LysM domain LMD38_RS08570 PF17209 Hfq protein LMD38_RS08585 PF00004 ATPase family associated with various cellular activities (AAA) LMD38_RS08585 PF17866 AAA lid domain LMD38_RS08590 PF03458 UPF0126 domain LMD38_RS08595 PF13167 GTP-binding GTPase N-terminal LMD38_RS08595 PF16360 GTP-binding GTPase Middle Region LMD38_RS08595 PF01926 50S ribosome-binding GTPase LMD38_RS08600 PF06838 Methionine gamma-lyase LMD38_RS08605 PF13411 MerR HTH family regulatory protein LMD38_RS08610 PF00120 Glutamine synthetase, catalytic domain LMD38_RS08610 PF03951 Glutamine synthetase, beta-Grasp domain LMD38_RS08615 PF03551 Transcriptional regulator PadR-like family LMD38_RS08630 PF01726 LexA DNA binding domain LMD38_RS08630 PF00717 Peptidase S24-like LMD38_RS08635 PF00239 Resolvase, N terminal domain LMD38_RS08640 PF05979 Bacterial protein of unknown function (DUF896) LMD38_RS08645 PF00149 Calcineurin-like phosphoesterase LMD38_RS08645 PF02872 5'-nucleotidase, C-terminal domain LMD38_RS08655 PF00005 ABC transporter LMD38_RS08660 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS08665 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS08670 PF00456 Transketolase, thiamine diphosphate binding domain LMD38_RS08670 PF02780 Transketolase, C-terminal domain LMD38_RS08670 PF02779 Transketolase, pyrimidine binding domain LMD38_RS08675 PF10747 Sporulation inhibitor of replication protein SirA LMD38_RS08680 PF03672 Uncharacterised protein family (UPF0154) LMD38_RS08685 PF00005 ABC transporter LMD38_RS08685 PF00664 ABC transporter transmembrane region LMD38_RS08690 PF00664 ABC transporter transmembrane region LMD38_RS08690 PF00005 ABC transporter LMD38_RS08695 PF01183 Glycosyl hydrolases family 25 LMD38_RS08695 PF08239 Bacterial SH3 domain LMD38_RS08710 PF01925 Sulfite exporter TauE/SafE LMD38_RS08720 PF13344 Haloacid dehalogenase-like hydrolase LMD38_RS08720 PF00293 NUDIX domain LMD38_RS08725 PF04172 LrgB-like family LMD38_RS08730 PF03788 LrgA family LMD38_RS08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS08735 PF03466 LysR substrate binding domain LMD38_RS08745 PF00005 ABC transporter LMD38_RS08755 PF07687 Peptidase dimerisation domain LMD38_RS08755 PF01546 Peptidase family M20/M25/M40 LMD38_RS08765 PF02683 Cytochrome C biogenesis protein transmembrane region LMD38_RS08770 PF07301 Protein of unknown function (DUF1453) LMD38_RS08780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LMD38_RS08800 PF11084 Protein of unknown function (DUF2621) LMD38_RS08815 PF01209 ubiE/COQ5 methyltransferase family LMD38_RS08820 PF09021 HutP LMD38_RS08825 PF00221 Aromatic amino acid lyase LMD38_RS08830 PF17391 Urocanase N-terminal domain LMD38_RS08830 PF17392 Urocanase C-terminal domain LMD38_RS08830 PF01175 Urocanase Rossmann-like domain LMD38_RS08835 PF01979 Amidohydrolase family LMD38_RS08840 PF00491 Arginase family LMD38_RS08845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LMD38_RS08850 PF01645 Conserved region in glutamate synthase LMD38_RS08860 PF00474 Sodium:solute symporter family LMD38_RS08865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS08870 PF01738 Dienelactone hydrolase family LMD38_RS08875 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS08875 PF00989 PAS fold LMD38_RS08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS08875 PF13426 PAS domain LMD38_RS08875 PF13188 PAS domain LMD38_RS08885 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LMD38_RS08885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS08905 PF05532 CsbD-like LMD38_RS08925 PF01381 Helix-turn-helix LMD38_RS08930 PF00005 ABC transporter LMD38_RS08940 PF00501 AMP-binding enzyme LMD38_RS08940 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS08945 PF02632 BioY family LMD38_RS08950 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS08950 PF00501 AMP-binding enzyme LMD38_RS08955 PF00108 Thiolase, N-terminal domain LMD38_RS08955 PF02803 Thiolase, C-terminal domain LMD38_RS08960 PF18801 response regulator aspartate phosphatase H, N terminal LMD38_RS08975 PF00293 NUDIX domain LMD38_RS08975 PF13344 Haloacid dehalogenase-like hydrolase LMD38_RS08980 PF02272 DHHA1 domain LMD38_RS08980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LMD38_RS08980 PF01411 tRNA synthetases class II (A) LMD38_RS08995 PF07690 Major Facilitator Superfamily LMD38_RS09005 PF08179 Small acid-soluble spore protein P family LMD38_RS09015 PF01522 Polysaccharide deacetylase LMD38_RS09025 PF00330 Aconitase family (aconitate hydratase) LMD38_RS09025 PF00694 Aconitase C-terminal domain LMD38_RS09030 PF00005 ABC transporter LMD38_RS09030 PF00664 ABC transporter transmembrane region LMD38_RS09040 PF00578 AhpC/TSA family LMD38_RS09045 PF14579 Helix-hairpin-helix motif LMD38_RS09045 PF00929 Exonuclease LMD38_RS09045 PF11490 DNA polymerase III polC-type N-terminus II LMD38_RS09045 PF02811 PHP domain LMD38_RS09045 PF01336 OB-fold nucleic acid binding domain LMD38_RS09045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LMD38_RS09045 PF07733 Bacterial DNA polymerase III alpha NTPase domain LMD38_RS09050 PF13040 Fur-regulated basic protein B LMD38_RS09055 PF08177 Small acid-soluble spore protein N family LMD38_RS09065 PF00704 Glycosyl hydrolases family 18 LMD38_RS09065 PF01476 LysM domain LMD38_RS09070 PF03061 Thioesterase superfamily LMD38_RS09075 PF01521 Iron-sulphur cluster biosynthesis LMD38_RS09080 PF02660 Glycerol-3-phosphate acyltransferase LMD38_RS09085 PF13597 Anaerobic ribonucleoside-triphosphate reductase LMD38_RS09085 PF03477 ATP cone domain LMD38_RS09090 PF04055 Radical SAM superfamily LMD38_RS09095 PF00072 Response regulator receiver domain LMD38_RS09095 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS09100 PF13180 PDZ domain LMD38_RS09105 PF13380 CoA binding domain LMD38_RS09110 PF01751 Toprim domain LMD38_RS09110 PF00204 DNA gyrase B LMD38_RS09110 PF00986 DNA gyrase B subunit, carboxyl terminus LMD38_RS09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS09115 PF03989 DNA gyrase C-terminal domain, beta-propeller LMD38_RS09115 PF00521 DNA gyrase/topoisomerase IV, subunit A LMD38_RS09120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LMD38_RS09120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LMD38_RS09140 PF00005 ABC transporter LMD38_RS09140 PF13732 Domain of unknown function (DUF4162) LMD38_RS09150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS09155 PF08281 Sigma-70, region 4 LMD38_RS09155 PF04542 Sigma-70 region 2 LMD38_RS09165 PF03816 Cell envelope-related transcriptional attenuator domain LMD38_RS09170 PF00375 Sodium:dicarboxylate symporter family LMD38_RS09175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS09180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS09185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS09190 PF08241 Methyltransferase domain LMD38_RS09230 PF03323 Bacillus/Clostridium GerA spore germination protein LMD38_RS09235 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LMD38_RS09235 PF01568 Molydopterin dinucleotide binding domain LMD38_RS09235 PF00037 4Fe-4S binding domain LMD38_RS09235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LMD38_RS09235 PF00384 Molybdopterin oxidoreductase LMD38_RS09240 PF07849 Protein of unknown function (DUF1641) LMD38_RS09245 PF10057 Uncharacterized conserved protein (DUF2294) LMD38_RS09250 PF02634 FdhD/NarQ family LMD38_RS09255 PF06463 Molybdenum Cofactor Synthesis C LMD38_RS09255 PF04055 Radical SAM superfamily LMD38_RS09260 PF01226 Formate/nitrite transporter LMD38_RS09265 PF00899 ThiF family LMD38_RS09270 PF03453 MoeA N-terminal region (domain I and II) LMD38_RS09270 PF03454 MoeA C-terminal region (domain IV) LMD38_RS09270 PF00994 Probable molybdopterin binding domain LMD38_RS09275 PF02391 MoaE protein LMD38_RS09285 PF10609 NUBPL iron-transfer P-loop NTPase LMD38_RS09300 PF06961 Protein of unknown function (DUF1294) LMD38_RS09305 PF00892 EamA-like transporter family LMD38_RS09310 PF02681 Divergent PAP2 family LMD38_RS09315 PF13243 Squalene-hopene cyclase C-terminal domain LMD38_RS09315 PF13249 Squalene-hopene cyclase N-terminal domain LMD38_RS09320 PF14151 YfhD-like protein LMD38_RS09370 PF00474 Sodium:solute symporter family LMD38_RS09375 PF01156 Inosine-uridine preferring nucleoside hydrolase LMD38_RS09385 PF14698 Argininosuccinate lyase C-terminal LMD38_RS09385 PF00206 Lyase LMD38_RS09395 PF00106 short chain dehydrogenase LMD38_RS09405 PF00132 Bacterial transferase hexapeptide (six repeats) LMD38_RS09415 PF00293 NUDIX domain LMD38_RS09425 PF00258 Flavodoxin LMD38_RS09435 PF00313 'Cold-shock' DNA-binding domain LMD38_RS09455 PF13039 Protein of unknown function (DUF3900) LMD38_RS09455 PF13037 Domain of unknown function (DUF3898) LMD38_RS09465 PF04294 VanW like protein LMD38_RS09470 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS09475 PF00005 ABC transporter LMD38_RS09480 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMD38_RS09485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS09500 PF02308 MgtC family LMD38_RS09505 PF08453 Peptidase family M9 N-terminal LMD38_RS09505 PF01752 Collagenase LMD38_RS09505 PF18496 Collagenase G catalytic helper subdomain LMD38_RS09540 PF02913 FAD linked oxidases, C-terminal domain LMD38_RS09540 PF01565 FAD binding domain LMD38_RS09545 PF01758 Sodium Bile acid symporter family LMD38_RS09555 PF04229 GrpB protein LMD38_RS09560 PF04299 Putative FMN-binding domain LMD38_RS09575 PF18801 response regulator aspartate phosphatase H, N terminal LMD38_RS09580 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LMD38_RS09585 PF00107 Zinc-binding dehydrogenase LMD38_RS09585 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS09590 PF01022 Bacterial regulatory protein, arsR family LMD38_RS09595 PF01494 FAD binding domain LMD38_RS09600 PF03009 Glycerophosphoryl diester phosphodiesterase family LMD38_RS09615 PF03466 LysR substrate binding domain LMD38_RS09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS09620 PF07690 Major Facilitator Superfamily LMD38_RS09630 PF00144 Beta-lactamase LMD38_RS09635 PF04371 Porphyromonas-type peptidyl-arginine deiminase LMD38_RS09650 PF01432 Peptidase family M3 LMD38_RS09650 PF08439 Oligopeptidase F LMD38_RS09655 PF00797 N-acetyltransferase LMD38_RS09660 PF00488 MutS domain V LMD38_RS09660 PF01713 Smr domain LMD38_RS09680 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS09680 PF00107 Zinc-binding dehydrogenase LMD38_RS09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS09685 PF03466 LysR substrate binding domain LMD38_RS09695 PF10901 Protein of unknown function (DUF2690) LMD38_RS09700 PF01609 Transposase DDE domain LMD38_RS09710 PF01381 Helix-turn-helix LMD38_RS09715 PF01381 Helix-turn-helix LMD38_RS09730 PF00005 ABC transporter LMD38_RS09765 PF05675 Protein of unknown function (DUF817) LMD38_RS09770 PF01032 FecCD transport family LMD38_RS09775 PF01032 FecCD transport family LMD38_RS09780 PF01497 Periplasmic binding protein LMD38_RS09795 PF03600 Citrate transporter LMD38_RS09800 PF08830 Protein of unknown function (DUF1806) LMD38_RS09805 PF02585 GlcNAc-PI de-N-acetylase LMD38_RS09825 PF07690 Major Facilitator Superfamily LMD38_RS09830 PF00324 Amino acid permease LMD38_RS09835 PF00107 Zinc-binding dehydrogenase LMD38_RS09835 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS09840 PF00753 Metallo-beta-lactamase superfamily LMD38_RS09890 PF12650 Domain of unknown function (DUF3784) LMD38_RS09900 PF00753 Metallo-beta-lactamase superfamily LMD38_RS09925 PF00005 ABC transporter LMD38_RS09925 PF13732 Domain of unknown function (DUF4162) LMD38_RS09930 PF01061 ABC-2 type transporter LMD38_RS09935 PF05656 Protein of unknown function (DUF805) LMD38_RS09950 PF00535 Glycosyl transferase family 2 LMD38_RS09950 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LMD38_RS09955 PF04542 Sigma-70 region 2 LMD38_RS09960 PF12791 Anti-sigma factor N-terminus LMD38_RS09965 PF01022 Bacterial regulatory protein, arsR family LMD38_RS09970 PF01638 HxlR-like helix-turn-helix LMD38_RS09975 PF02525 Flavodoxin-like fold LMD38_RS09980 PF00501 AMP-binding enzyme LMD38_RS09980 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS09990 PF00106 short chain dehydrogenase LMD38_RS10000 PF02567 Phenazine biosynthesis-like protein LMD38_RS10030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LMD38_RS10030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LMD38_RS10035 PF07702 UTRA domain LMD38_RS10035 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS10040 PF03960 ArsC family LMD38_RS10075 PF03928 Haem-degrading LMD38_RS10080 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LMD38_RS10080 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LMD38_RS10085 PF00456 Transketolase, thiamine diphosphate binding domain LMD38_RS10085 PF02779 Transketolase, pyrimidine binding domain LMD38_RS10085 PF02780 Transketolase, C-terminal domain LMD38_RS10090 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LMD38_RS10090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LMD38_RS10095 PF00923 Transaldolase/Fructose-6-phosphate aldolase LMD38_RS10100 PF02447 GntP family permease LMD38_RS10105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMD38_RS10105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMD38_RS10110 PF10282 Lactonase, 7-bladed beta-propeller LMD38_RS10115 PF06906 Protein of unknown function (DUF1272) LMD38_RS10120 PF00857 Isochorismatase family LMD38_RS10125 PF03466 LysR substrate binding domain LMD38_RS10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS10130 PF00805 Pentapeptide repeats (8 copies) LMD38_RS10140 PF00892 EamA-like transporter family LMD38_RS10155 PF01370 NAD dependent epimerase/dehydratase family LMD38_RS10160 PF08421 Putative zinc binding domain LMD38_RS10160 PF08484 C-methyltransferase C-terminal domain LMD38_RS10165 PF16363 GDP-mannose 4,6 dehydratase LMD38_RS10170 PF00483 Nucleotidyl transferase LMD38_RS10180 PF13411 MerR HTH family regulatory protein LMD38_RS10185 PF03471 Transporter associated domain LMD38_RS10185 PF01595 Cyclin M transmembrane N-terminal domain LMD38_RS10185 PF00571 CBS domain LMD38_RS10195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS10210 PF07690 Major Facilitator Superfamily LMD38_RS10225 PF08241 Methyltransferase domain LMD38_RS10255 PF01594 AI-2E family transporter LMD38_RS10265 PF00579 tRNA synthetases class I (W and Y) LMD38_RS10270 PF12464 Maltose acetyltransferase LMD38_RS10270 PF14602 Hexapeptide repeat of succinyl-transferase LMD38_RS10280 PF00480 ROK family LMD38_RS10285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS10290 PF13344 Haloacid dehalogenase-like hydrolase LMD38_RS10290 PF00293 NUDIX domain LMD38_RS10310 PF13350 Tyrosine phosphatase family LMD38_RS10320 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS10345 PF00005 ABC transporter LMD38_RS10365 PF02887 Pyruvate kinase, alpha/beta domain LMD38_RS10365 PF00391 PEP-utilising enzyme, mobile domain LMD38_RS10365 PF00224 Pyruvate kinase, barrel domain LMD38_RS10385 PF03129 Anticodon binding domain LMD38_RS10385 PF13393 Histidyl-tRNA synthetase LMD38_RS10390 PF04073 Aminoacyl-tRNA editing domain LMD38_RS10400 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LMD38_RS10415 PF01471 Putative peptidoglycan binding domain LMD38_RS10415 PF01476 LysM domain LMD38_RS10415 PF01510 N-acetylmuramoyl-L-alanine amidase LMD38_RS10425 PF03606 C4-dicarboxylate anaerobic carrier LMD38_RS10430 PF03737 Aldolase/RraA LMD38_RS10445 PF02361 Cobalt transport protein LMD38_RS10450 PF00005 ABC transporter LMD38_RS10475 PF02525 Flavodoxin-like fold LMD38_RS10485 PF02667 Short chain fatty acid transporter LMD38_RS10500 PF07690 Major Facilitator Superfamily LMD38_RS10505 PF01047 MarR family LMD38_RS10510 PF12697 Alpha/beta hydrolase family LMD38_RS10520 PF07690 Major Facilitator Superfamily LMD38_RS10525 PF14044 NETI protein LMD38_RS10570 PF04740 LXG domain of WXG superfamily LMD38_RS10795 PF01510 N-acetylmuramoyl-L-alanine amidase LMD38_RS10795 PF01476 LysM domain LMD38_RS10795 PF01471 Putative peptidoglycan binding domain LMD38_RS10810 PF01804 Penicillin amidase LMD38_RS10815 PF01434 Peptidase family M41 LMD38_RS10815 PF17862 AAA+ lid domain LMD38_RS10815 PF00004 ATPase family associated with various cellular activities (AAA) LMD38_RS10815 PF06480 FtsH Extracellular LMD38_RS10845 PF00266 Aminotransferase class-V LMD38_RS10850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMD38_RS10850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMD38_RS10850 PF01842 ACT domain LMD38_RS10895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS10895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LMD38_RS10900 PF04299 Putative FMN-binding domain LMD38_RS10905 PF00583 Acetyltransferase (GNAT) family LMD38_RS10910 PF01047 MarR family LMD38_RS10920 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS10920 PF00072 Response regulator receiver domain LMD38_RS10925 PF00672 HAMP domain LMD38_RS10925 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS10925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS10940 PF02687 FtsX-like permease family LMD38_RS10945 PF00005 ABC transporter LMD38_RS10960 PF04072 Leucine carboxyl methyltransferase LMD38_RS10975 PF00291 Pyridoxal-phosphate dependent enzyme LMD38_RS11045 PF09962 Uncharacterized conserved protein (DUF2196) LMD38_RS11055 PF07690 Major Facilitator Superfamily LMD38_RS11060 PF00667 FAD binding domain LMD38_RS11060 PF00258 Flavodoxin LMD38_RS11060 PF00175 Oxidoreductase NAD-binding domain LMD38_RS11060 PF00067 Cytochrome P450 LMD38_RS11065 PF12802 MarR family LMD38_RS11075 PF08803 Putative mono-oxygenase ydhR LMD38_RS11090 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LMD38_RS11120 PF00269 Small, acid-soluble spore proteins, alpha/beta type LMD38_RS11125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS11150 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS11155 PF07690 Major Facilitator Superfamily LMD38_RS11160 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS11160 PF18665 Tetracyclin repressor-like, C-terminal domain LMD38_RS11165 PF00550 Phosphopantetheine attachment site LMD38_RS11165 PF07993 Male sterility protein LMD38_RS11210 PF00005 ABC transporter LMD38_RS11230 PF01872 RibD C-terminal domain LMD38_RS11240 PF01022 Bacterial regulatory protein, arsR family LMD38_RS11245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS11250 PF01758 Sodium Bile acid symporter family LMD38_RS11255 PF01451 Low molecular weight phosphotyrosine protein phosphatase LMD38_RS11260 PF00356 Bacterial regulatory proteins, lacI family LMD38_RS11265 PF05025 RbsD / FucU transport protein family LMD38_RS11270 PF00005 ABC transporter LMD38_RS11275 PF02653 Branched-chain amino acid transport system / permease component LMD38_RS11285 PF00596 Class II Aldolase and Adducin N-terminal domain LMD38_RS11290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMD38_RS11290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMD38_RS11295 PF02952 L-fucose isomerase, C-terminal domain LMD38_RS11295 PF07881 L-fucose isomerase, first N-terminal domain LMD38_RS11295 PF07882 L-fucose isomerase, second N-terminal domain LMD38_RS11300 PF00596 Class II Aldolase and Adducin N-terminal domain LMD38_RS11325 PF12996 DUF based on E. rectale Gene description (DUF3880) LMD38_RS11330 PF00561 alpha/beta hydrolase fold LMD38_RS11335 PF07282 Putative transposase DNA-binding domain LMD38_RS11335 PF01385 Probable transposase LMD38_RS11335 PF12323 Helix-turn-helix domain LMD38_RS11340 PF01040 UbiA prenyltransferase family LMD38_RS11355 PF10057 Uncharacterized conserved protein (DUF2294) LMD38_RS11360 PF00361 Proton-conducting membrane transporter LMD38_RS11360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LMD38_RS11365 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LMD38_RS11375 PF07859 alpha/beta hydrolase fold LMD38_RS11385 PF07690 Major Facilitator Superfamily LMD38_RS11395 PF00875 DNA photolyase LMD38_RS11395 PF03441 FAD binding domain of DNA photolyase LMD38_RS11400 PF03073 TspO/MBR family LMD38_RS11415 PF13529 Peptidase_C39 like family LMD38_RS11420 PF00072 Response regulator receiver domain LMD38_RS11420 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS11425 PF00989 PAS fold LMD38_RS11425 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS11425 PF18698 Histidine kinase sensor domain LMD38_RS11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS11425 PF00672 HAMP domain LMD38_RS11435 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS11435 PF13823 Alcohol dehydrogenase GroES-associated LMD38_RS11435 PF00107 Zinc-binding dehydrogenase LMD38_RS11440 PF00269 Small, acid-soluble spore proteins, alpha/beta type LMD38_RS11445 PF11553 Protein of unknown function (DUF3231) LMD38_RS11450 PF00753 Metallo-beta-lactamase superfamily LMD38_RS11455 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LMD38_RS11460 PF00391 PEP-utilising enzyme, mobile domain LMD38_RS11460 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LMD38_RS11465 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS11475 PF02915 Rubrerythrin LMD38_RS11485 PF10903 Protein of unknown function (DUF2691) LMD38_RS11500 PF07670 Nucleoside recognition LMD38_RS11515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMD38_RS11515 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LMD38_RS11515 PF02770 Acyl-CoA dehydrogenase, middle domain LMD38_RS11520 PF07454 Stage II sporulation protein P (SpoIIP) LMD38_RS11525 PF03932 CutC family LMD38_RS11530 PF10502 Signal peptidase, peptidase S26 LMD38_RS11535 PF09339 IclR helix-turn-helix domain LMD38_RS11535 PF01614 Bacterial transcriptional regulator LMD38_RS11540 PF02682 Carboxyltransferase domain, subdomain C and D LMD38_RS11545 PF02626 Carboxyltransferase domain, subdomain A and B LMD38_RS11550 PF03746 LamB/YcsF family LMD38_RS11565 PF01470 Pyroglutamyl peptidase LMD38_RS11570 PF02146 Sir2 family LMD38_RS11580 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS11580 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS11585 PF10502 Signal peptidase, peptidase S26 LMD38_RS11595 PF00293 NUDIX domain LMD38_RS11610 PF02567 Phenazine biosynthesis-like protein LMD38_RS11620 PF13411 MerR HTH family regulatory protein LMD38_RS11620 PF06445 GyrI-like small molecule binding domain LMD38_RS11630 PF00324 Amino acid permease LMD38_RS11640 PF01925 Sulfite exporter TauE/SafE LMD38_RS11670 PF13031 Protein of unknown function (DUF3892) LMD38_RS11675 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LMD38_RS11685 PF00155 Aminotransferase class I and II LMD38_RS11685 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS11690 PF00892 EamA-like transporter family LMD38_RS11705 PF00583 Acetyltransferase (GNAT) family LMD38_RS11710 PF12833 Helix-turn-helix domain LMD38_RS11730 PF00005 ABC transporter LMD38_RS11755 PF00005 ABC transporter LMD38_RS11760 PF16363 GDP-mannose 4,6 dehydratase LMD38_RS11770 PF00293 NUDIX domain LMD38_RS11780 PF14492 Elongation Factor G, domain II LMD38_RS11780 PF00009 Elongation factor Tu GTP binding domain LMD38_RS11780 PF00679 Elongation factor G C-terminus LMD38_RS11780 PF03764 Elongation factor G, domain IV LMD38_RS11785 PF01047 MarR family LMD38_RS11790 PF00881 Nitroreductase family LMD38_RS11810 PF04740 LXG domain of WXG superfamily LMD38_RS11810 PF14436 Bacterial EndoU nuclease LMD38_RS11840 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family LMD38_RS11860 PF09346 SMI1 / KNR4 family (SUKH-1) LMD38_RS11950 PF07726 ATPase family associated with various cellular activities (AAA) LMD38_RS11950 PF17863 AAA lid domain LMD38_RS11970 PF00144 Beta-lactamase LMD38_RS11980 PF14602 Hexapeptide repeat of succinyl-transferase LMD38_RS11980 PF12464 Maltose acetyltransferase LMD38_RS11985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS11985 PF03466 LysR substrate binding domain LMD38_RS11990 PF13382 Adenine deaminase C-terminal domain LMD38_RS11990 PF01979 Amidohydrolase family LMD38_RS12010 PF06628 Catalase-related immune-responsive LMD38_RS12010 PF00199 Catalase LMD38_RS12015 PF00202 Aminotransferase class-III LMD38_RS12020 PF07690 Major Facilitator Superfamily LMD38_RS12035 PF07726 ATPase family associated with various cellular activities (AAA) LMD38_RS12035 PF17863 AAA lid domain LMD38_RS12060 PF12681 Glyoxalase-like domain LMD38_RS12065 PF13302 Acetyltransferase (GNAT) domain LMD38_RS12075 PF04397 LytTr DNA-binding domain LMD38_RS12075 PF00072 Response regulator receiver domain LMD38_RS12085 PF10086 YhfC intramembrane metalloprotease LMD38_RS12095 PF13443 Cro/C1-type HTH DNA-binding domain LMD38_RS12100 PF11188 Protein of unknown function (DUF2975) LMD38_RS12105 PF00245 Alkaline phosphatase LMD38_RS12110 PF05547 Immune inhibitor A peptidase M6 LMD38_RS12115 PF00487 Fatty acid desaturase LMD38_RS12135 PF00324 Amino acid permease LMD38_RS12140 PF09339 IclR helix-turn-helix domain LMD38_RS12140 PF01614 Bacterial transcriptional regulator LMD38_RS12145 PF01546 Peptidase family M20/M25/M40 LMD38_RS12150 PF14748 Pyrroline-5-carboxylate reductase dimerisation LMD38_RS12150 PF03807 NADP oxidoreductase coenzyme F420-dependent LMD38_RS12155 PF00696 Amino acid kinase family LMD38_RS12155 PF01472 PUA domain LMD38_RS12160 PF00171 Aldehyde dehydrogenase family LMD38_RS12165 PF07662 Na+ dependent nucleoside transporter C-terminus LMD38_RS12165 PF01773 Na+ dependent nucleoside transporter N-terminus LMD38_RS12180 PF03992 Antibiotic biosynthesis monooxygenase LMD38_RS12200 PF13302 Acetyltransferase (GNAT) domain LMD38_RS12205 PF01791 DeoC/LacD family aldolase LMD38_RS12215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMD38_RS12215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMD38_RS12220 PF00325 Bacterial regulatory proteins, crp family LMD38_RS12220 PF04198 Putative sugar-binding domain LMD38_RS12225 PF00005 ABC transporter LMD38_RS12230 PF02653 Branched-chain amino acid transport system / permease component LMD38_RS12235 PF02653 Branched-chain amino acid transport system / permease component LMD38_RS12240 PF13407 Periplasmic binding protein domain LMD38_RS12245 PF06039 Malate:quinone oxidoreductase (Mqo) LMD38_RS12255 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS12260 PF07690 Major Facilitator Superfamily LMD38_RS12265 PF08031 Berberine and berberine like LMD38_RS12265 PF01565 FAD binding domain LMD38_RS12280 PF01476 LysM domain LMD38_RS12280 PF06725 3D domain LMD38_RS12295 PF01636 Phosphotransferase enzyme family LMD38_RS12320 PF00793 DAHP synthetase I family LMD38_RS12320 PF01817 Chorismate mutase type II LMD38_RS12325 PF01264 Chorismate synthase LMD38_RS12330 PF00155 Aminotransferase class I and II LMD38_RS12335 PF02153 Prephenate dehydrogenase LMD38_RS12335 PF01842 ACT domain LMD38_RS12340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LMD38_RS12350 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS12350 PF16295 Tetracyclin repressor-like, C-terminal domain LMD38_RS12355 PF03176 MMPL family LMD38_RS12370 PF00005 ABC transporter LMD38_RS12370 PF12848 ABC transporter LMD38_RS12375 PF00884 Sulfatase LMD38_RS12380 PF03741 Integral membrane protein TerC family LMD38_RS12385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LMD38_RS12395 PF03611 PTS system sugar-specific permease component LMD38_RS12405 PF01522 Polysaccharide deacetylase LMD38_RS12410 PF08713 DNA alkylation repair enzyme LMD38_RS12430 PF12867 DinB superfamily LMD38_RS12435 PF13536 Putative multidrug resistance efflux transporter LMD38_RS12455 PF02522 Aminoglycoside 3-N-acetyltransferase LMD38_RS12475 PF00293 NUDIX domain LMD38_RS12475 PF13344 Haloacid dehalogenase-like hydrolase LMD38_RS12495 PF00005 ABC transporter LMD38_RS12500 PF09084 NMT1/THI5 like LMD38_RS12505 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS12510 PF00296 Luciferase-like monooxygenase LMD38_RS12525 PF01594 AI-2E family transporter LMD38_RS12580 PF00005 ABC transporter LMD38_RS12600 PF03630 Fumble LMD38_RS12605 PF07977 FabA-like domain LMD38_RS12610 PF00155 Aminotransferase class I and II LMD38_RS12645 PF08241 Methyltransferase domain LMD38_RS12655 PF01156 Inosine-uridine preferring nucleoside hydrolase LMD38_RS12660 PF04226 Transglycosylase associated protein LMD38_RS12680 PF07690 Major Facilitator Superfamily LMD38_RS12685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS12685 PF12793 Sugar transport-related sRNA regulator N-term LMD38_RS12690 PF13171 Protein of unknown function (DUF4004) LMD38_RS12695 PF04519 Polymer-forming cytoskeletal LMD38_RS12705 PF07690 Major Facilitator Superfamily LMD38_RS12730 PF02645 Uncharacterised protein, DegV family COG1307 LMD38_RS12740 PF08439 Oligopeptidase F LMD38_RS12740 PF01432 Peptidase family M3 LMD38_RS12745 PF03808 Glycosyl transferase WecB/TagA/CpsF family LMD38_RS12755 PF01048 Phosphorylase superfamily LMD38_RS12775 PF00072 Response regulator receiver domain LMD38_RS12775 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS12780 PF16736 Single Cache-like LMD38_RS12780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS12780 PF00989 PAS fold LMD38_RS12780 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS12785 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LMD38_RS12785 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LMD38_RS12810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMD38_RS12820 PF01965 DJ-1/PfpI family LMD38_RS12835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LMD38_RS12835 PF13378 Enolase C-terminal domain-like LMD38_RS12840 PF00877 NlpC/P60 family LMD38_RS12840 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain LMD38_RS12845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS12850 PF00958 GMP synthase C terminal domain LMD38_RS12850 PF13673 Acetyltransferase (GNAT) domain LMD38_RS12850 PF13302 Acetyltransferase (GNAT) domain LMD38_RS12850 PF03352 Methyladenine glycosylase LMD38_RS12850 PF00117 Glutamine amidotransferase class-I LMD38_RS12855 PF04914 DltD protein LMD38_RS12870 PF09335 SNARE associated Golgi protein LMD38_RS12875 PF08876 Domain of unknown function (DUF1836) LMD38_RS12890 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS12890 PF04324 BFD-like [2Fe-2S] binding domain LMD38_RS12900 PF04324 BFD-like [2Fe-2S] binding domain LMD38_RS12900 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS12905 PF02954 Bacterial regulatory protein, Fis family LMD38_RS12905 PF13188 PAS domain LMD38_RS12905 PF00158 Sigma-54 interaction domain LMD38_RS12910 PF01266 FAD dependent oxidoreductase LMD38_RS12915 PF05544 Proline racemase LMD38_RS12920 PF05544 Proline racemase LMD38_RS12925 PF00701 Dihydrodipicolinate synthetase family LMD38_RS12930 PF00171 Aldehyde dehydrogenase family LMD38_RS12935 PF01235 Sodium:alanine symporter family LMD38_RS12940 PF02627 Carboxymuconolactone decarboxylase family LMD38_RS12945 PF03193 RsgA GTPase LMD38_RS12955 PF18416 N-acetylglucosamine binding protein domain 2 LMD38_RS12955 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LMD38_RS12960 PF02833 DHHA2 domain LMD38_RS12960 PF01368 DHH family LMD38_RS12985 PF12123 N-acetylmuramoyl-l-alanine amidase LMD38_RS12985 PF01510 N-acetylmuramoyl-L-alanine amidase LMD38_RS13005 PF16124 RecQ zinc-binding LMD38_RS13005 PF00570 HRDC domain LMD38_RS13005 PF00271 Helicase conserved C-terminal domain LMD38_RS13005 PF00270 DEAD/DEAH box helicase LMD38_RS13005 PF09382 RQC domain LMD38_RS13025 PF13538 UvrD-like helicase C-terminal domain LMD38_RS13065 PF04237 YjbR LMD38_RS13070 PF08241 Methyltransferase domain LMD38_RS13075 PF10990 Protein of unknown function (DUF2809) LMD38_RS13090 PF03781 Sulfatase-modifying factor enzyme 1 LMD38_RS13095 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LMD38_RS13100 PF13673 Acetyltransferase (GNAT) domain LMD38_RS13105 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LMD38_RS13120 PF00574 Clp protease LMD38_RS13125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LMD38_RS13130 PF00571 CBS domain LMD38_RS13130 PF00005 ABC transporter LMD38_RS13135 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS13160 PF00293 NUDIX domain LMD38_RS13160 PF09297 NADH pyrophosphatase zinc ribbon domain LMD38_RS13170 PF00485 Phosphoribulokinase / Uridine kinase family LMD38_RS13180 PF00106 short chain dehydrogenase LMD38_RS13190 PF00676 Dehydrogenase E1 component LMD38_RS13195 PF02780 Transketolase, C-terminal domain LMD38_RS13195 PF02779 Transketolase, pyrimidine binding domain LMD38_RS13200 PF00364 Biotin-requiring enzyme LMD38_RS13200 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LMD38_RS13200 PF02817 e3 binding domain LMD38_RS13205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMD38_RS13205 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS13220 PF00455 DeoR C terminal sensor domain LMD38_RS13220 PF08220 DeoR-like helix-turn-helix domain LMD38_RS13225 PF13302 Acetyltransferase (GNAT) domain LMD38_RS13235 PF01590 GAF domain LMD38_RS13235 PF02954 Bacterial regulatory protein, Fis family LMD38_RS13235 PF00158 Sigma-54 interaction domain LMD38_RS13260 PF00293 NUDIX domain LMD38_RS13260 PF13344 Haloacid dehalogenase-like hydrolase LMD38_RS13270 PF00266 Aminotransferase class-V LMD38_RS13275 PF04199 Putative cyclase LMD38_RS13280 PF03301 Tryptophan 2,3-dioxygenase LMD38_RS13300 PF07486 Cell Wall Hydrolase LMD38_RS13300 PF01471 Putative peptidoglycan binding domain LMD38_RS13305 PF14620 YpeB sporulation LMD38_RS13305 PF03413 Peptidase propeptide and YPEB domain LMD38_RS13310 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LMD38_RS13325 PF06081 Aromatic acid exporter family member 1 LMD38_RS13350 PF00561 alpha/beta hydrolase fold LMD38_RS13355 PF00107 Zinc-binding dehydrogenase LMD38_RS13355 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS13360 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS13360 PF00155 Aminotransferase class I and II LMD38_RS13365 PF00892 EamA-like transporter family LMD38_RS13370 PF00308 Bacterial dnaA protein LMD38_RS13370 PF08299 Bacterial dnaA protein helix-turn-helix LMD38_RS13370 PF11638 DnaA N-terminal domain LMD38_RS13375 PF00344 SecY translocase LMD38_RS13390 PF02868 Thermolysin metallopeptidase, alpha-helical domain LMD38_RS13390 PF03413 Peptidase propeptide and YPEB domain LMD38_RS13390 PF01447 Thermolysin metallopeptidase, catalytic domain LMD38_RS13390 PF07504 Fungalysin/Thermolysin Propeptide Motif LMD38_RS13395 PF00128 Alpha amylase, catalytic domain LMD38_RS13395 PF03714 Bacterial pullanase-associated domain LMD38_RS13395 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LMD38_RS13400 PF01569 PAP2 superfamily LMD38_RS13410 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS13435 PF01266 FAD dependent oxidoreductase LMD38_RS13475 PF01541 GIY-YIG catalytic domain LMD38_RS13485 PF02673 Bacitracin resistance protein BacA LMD38_RS13500 PF12867 DinB superfamily LMD38_RS13510 PF08000 Bacterial PH domain LMD38_RS13515 PF01734 Patatin-like phospholipase LMD38_RS13540 PF09234 Domain of unknown function (DUF1963) LMD38_RS13550 PF12706 Beta-lactamase superfamily domain LMD38_RS13560 PF00293 NUDIX domain LMD38_RS13565 PF02768 DNA polymerase III beta subunit, C-terminal domain LMD38_RS13565 PF00712 DNA polymerase III beta subunit, N-terminal domain LMD38_RS13565 PF02767 DNA polymerase III beta subunit, central domain LMD38_RS13570 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LMD38_RS13570 PF00293 NUDIX domain LMD38_RS13570 PF09297 NADH pyrophosphatase zinc ribbon domain LMD38_RS13575 PF07690 Major Facilitator Superfamily LMD38_RS13585 PF00144 Beta-lactamase LMD38_RS13595 PF00293 NUDIX domain LMD38_RS13610 PF01156 Inosine-uridine preferring nucleoside hydrolase LMD38_RS13620 PF00892 EamA-like transporter family LMD38_RS13625 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS13625 PF00155 Aminotransferase class I and II LMD38_RS13645 PF03009 Glycerophosphoryl diester phosphodiesterase family LMD38_RS13660 PF07690 Major Facilitator Superfamily LMD38_RS13705 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS13705 PF08361 MAATS-type transcriptional repressor, C-terminal region LMD38_RS13710 PF03793 PASTA domain LMD38_RS13710 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS13710 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS13715 PF01569 PAP2 superfamily LMD38_RS13720 PF00107 Zinc-binding dehydrogenase LMD38_RS13720 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS13725 PF18719 ArlS sensor domain LMD38_RS13725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS13725 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS13730 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS13730 PF00072 Response regulator receiver domain LMD38_RS13740 PF04229 GrpB protein LMD38_RS13750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS13750 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS13765 PF00005 ABC transporter LMD38_RS13765 PF12558 ATP-binding cassette cobalt transporter LMD38_RS13770 PF07155 ECF-type riboflavin transporter, S component LMD38_RS13775 PF01177 Asp/Glu/Hydantoin racemase LMD38_RS13780 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LMD38_RS13785 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS13785 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS13790 PF13426 PAS domain LMD38_RS13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS13790 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS13790 PF00989 PAS fold LMD38_RS13790 PF13188 PAS domain LMD38_RS13795 PF07690 Major Facilitator Superfamily LMD38_RS13830 PF00067 Cytochrome P450 LMD38_RS13840 PF07561 Domain of Unknown Function (DUF1540) LMD38_RS13845 PF00132 Bacterial transferase hexapeptide (six repeats) LMD38_RS13855 PF00067 Cytochrome P450 LMD38_RS13905 PF01695 IstB-like ATP binding protein LMD38_RS13910 PF00665 Integrase core domain LMD38_RS13910 PF02796 Helix-turn-helix domain of resolvase LMD38_RS14035 PF03070 TENA/THI-4/PQQC family LMD38_RS14040 PF07478 D-ala D-ala ligase C-terminus LMD38_RS14040 PF01820 D-ala D-ala ligase N-terminus LMD38_RS14045 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS14045 PF00155 Aminotransferase class I and II LMD38_RS14050 PF01842 ACT domain LMD38_RS14050 PF03447 Homoserine dehydrogenase, NAD binding domain LMD38_RS14050 PF00742 Homoserine dehydrogenase LMD38_RS14070 PF02687 FtsX-like permease family LMD38_RS14075 PF00005 ABC transporter LMD38_RS14080 PF00005 ABC transporter LMD38_RS14080 PF12848 ABC transporter LMD38_RS14100 PF01609 Transposase DDE domain LMD38_RS14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS14110 PF00072 Response regulator receiver domain LMD38_RS14110 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS14115 PF03069 Acetamidase/Formamidase family LMD38_RS14120 PF07486 Cell Wall Hydrolase LMD38_RS14125 PF01921 tRNA synthetases class I (K) LMD38_RS14135 PF08450 SMP-30/Gluconolactonase/LRE-like region LMD38_RS14155 PF04239 Protein of unknown function (DUF421) LMD38_RS14180 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS14180 PF00155 Aminotransferase class I and II LMD38_RS14195 PF12833 Helix-turn-helix domain LMD38_RS14210 PF00005 ABC transporter LMD38_RS14210 PF13732 Domain of unknown function (DUF4162) LMD38_RS14235 PF07690 Major Facilitator Superfamily LMD38_RS14240 PF17760 UvrA interaction domain LMD38_RS14240 PF17755 UvrA DNA-binding domain LMD38_RS14240 PF00005 ABC transporter LMD38_RS14260 PF02868 Thermolysin metallopeptidase, alpha-helical domain LMD38_RS14260 PF01447 Thermolysin metallopeptidase, catalytic domain LMD38_RS14260 PF03413 Peptidase propeptide and YPEB domain LMD38_RS14260 PF07504 Fungalysin/Thermolysin Propeptide Motif LMD38_RS14280 PF01048 Phosphorylase superfamily LMD38_RS14290 PF01966 HD domain LMD38_RS14295 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS14295 PF00072 Response regulator receiver domain LMD38_RS14300 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS14300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS14305 PF07943 Penicillin-binding protein 5, C-terminal domain LMD38_RS14305 PF00768 D-alanyl-D-alanine carboxypeptidase LMD38_RS14310 PF05163 DinB family LMD38_RS14320 PF00485 Phosphoribulokinase / Uridine kinase family LMD38_RS14335 PF16177 Acetyl-coenzyme A synthetase N-terminus LMD38_RS14335 PF00501 AMP-binding enzyme LMD38_RS14335 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS14340 PF01039 Carboxyl transferase domain LMD38_RS14345 PF00378 Enoyl-CoA hydratase/isomerase LMD38_RS14350 PF00682 HMGL-like LMD38_RS14355 PF00364 Biotin-requiring enzyme LMD38_RS14360 PF00289 Biotin carboxylase, N-terminal domain LMD38_RS14360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMD38_RS14360 PF02785 Biotin carboxylase C-terminal domain LMD38_RS14365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LMD38_RS14365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMD38_RS14365 PF02770 Acyl-CoA dehydrogenase, middle domain LMD38_RS14380 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS14380 PF08359 YsiA-like protein, C-terminal region LMD38_RS14390 PF00005 ABC transporter LMD38_RS14400 PF00149 Calcineurin-like phosphoesterase LMD38_RS14410 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS14410 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS14415 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS14415 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS14425 PF08281 Sigma-70, region 4 LMD38_RS14425 PF04542 Sigma-70 region 2 LMD38_RS14430 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS14430 PF05223 NTF2-like N-terminal transpeptidase domain LMD38_RS14430 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS14440 PF01546 Peptidase family M20/M25/M40 LMD38_RS14440 PF07687 Peptidase dimerisation domain LMD38_RS14460 PF14171 Toxin SpoIISA, type II toxin-antitoxin system LMD38_RS14465 PF00300 Histidine phosphatase superfamily (branch 1) LMD38_RS14470 PF01047 MarR family LMD38_RS14475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMD38_RS14475 PF00205 Thiamine pyrophosphate enzyme, central domain LMD38_RS14475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMD38_RS14480 PF08241 Methyltransferase domain LMD38_RS14490 PF03848 Tellurite resistance protein TehB LMD38_RS14490 PF09313 Domain of unknown function (DUF1971) LMD38_RS14495 PF00005 ABC transporter LMD38_RS14495 PF02687 FtsX-like permease family LMD38_RS14495 PF12704 MacB-like periplasmic core domain LMD38_RS14510 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS14510 PF17932 Tetracyclin repressor-like, C-terminal domain LMD38_RS14515 PF00270 DEAD/DEAH box helicase LMD38_RS14515 PF00271 Helicase conserved C-terminal domain LMD38_RS14540 PF07690 Major Facilitator Superfamily LMD38_RS14545 PF01047 MarR family LMD38_RS14550 PF00291 Pyridoxal-phosphate dependent enzyme LMD38_RS14555 PF00266 Aminotransferase class-V LMD38_RS14560 PF02660 Glycerol-3-phosphate acyltransferase LMD38_RS14565 PF01869 BadF/BadG/BcrA/BcrD ATPase family LMD38_RS14570 PF03702 Anhydro-N-acetylmuramic acid kinase LMD38_RS14580 PF02378 Phosphotransferase system, EIIC LMD38_RS14590 PF02638 Glycosyl hydrolase-like 10 LMD38_RS14650 PF07883 Cupin domain LMD38_RS14650 PF01381 Helix-turn-helix LMD38_RS14670 PF00005 ABC transporter LMD38_RS14670 PF00664 ABC transporter transmembrane region LMD38_RS14675 PF00664 ABC transporter transmembrane region LMD38_RS14675 PF00005 ABC transporter LMD38_RS14695 PF02774 Semialdehyde dehydrogenase, dimerisation domain LMD38_RS14695 PF01118 Semialdehyde dehydrogenase, NAD binding domain LMD38_RS14700 PF03466 LysR substrate binding domain LMD38_RS14700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS14725 PF00313 'Cold-shock' DNA-binding domain LMD38_RS14735 PF13302 Acetyltransferase (GNAT) domain LMD38_RS14740 PF08241 Methyltransferase domain LMD38_RS14750 PF01593 Flavin containing amine oxidoreductase LMD38_RS14755 PF00561 alpha/beta hydrolase fold LMD38_RS14775 PF00583 Acetyltransferase (GNAT) family LMD38_RS14800 PF03176 MMPL family LMD38_RS14815 PF01047 MarR family LMD38_RS14865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMD38_RS14865 PF00205 Thiamine pyrophosphate enzyme, central domain LMD38_RS14865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMD38_RS14875 PF07690 Major Facilitator Superfamily LMD38_RS14880 PF12146 Serine aminopeptidase, S33 LMD38_RS14890 PF00005 ABC transporter LMD38_RS14895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LMD38_RS14895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMD38_RS14895 PF02824 TGS domain LMD38_RS14895 PF03129 Anticodon binding domain LMD38_RS14900 PF00849 RNA pseudouridylate synthase LMD38_RS14900 PF01479 S4 domain LMD38_RS14905 PF16291 Domain of unknown function (DUF4937 LMD38_RS14915 PF01235 Sodium:alanine symporter family LMD38_RS14920 PF00082 Subtilase family LMD38_RS14925 PF05163 DinB family LMD38_RS14935 PF00216 Bacterial DNA-binding protein LMD38_RS14950 PF07690 Major Facilitator Superfamily LMD38_RS14955 PF03621 MbtH-like protein LMD38_RS14960 PF00668 Condensation domain LMD38_RS14960 PF00975 Thioesterase domain LMD38_RS14960 PF00550 Phosphopantetheine attachment site LMD38_RS14960 PF00501 AMP-binding enzyme LMD38_RS14960 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS14965 PF00550 Phosphopantetheine attachment site LMD38_RS14965 PF00857 Isochorismatase family LMD38_RS14970 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS14970 PF00501 AMP-binding enzyme LMD38_RS14975 PF00425 chorismate binding enzyme LMD38_RS14980 PF00106 short chain dehydrogenase LMD38_RS14985 PF07690 Major Facilitator Superfamily LMD38_RS14995 PF01022 Bacterial regulatory protein, arsR family LMD38_RS15005 PF13476 AAA domain LMD38_RS15010 PF00149 Calcineurin-like phosphoesterase LMD38_RS15010 PF12320 Type 5 capsule protein repressor C-terminal domain LMD38_RS15015 PF10763 Protein of unknown function (DUF2584) LMD38_RS15025 PF00378 Enoyl-CoA hydratase/isomerase LMD38_RS15030 PF01810 LysE type translocator LMD38_RS15035 PF00171 Aldehyde dehydrogenase family LMD38_RS15040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LMD38_RS15040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LMD38_RS15045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LMD38_RS15045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMD38_RS15045 PF02770 Acyl-CoA dehydrogenase, middle domain LMD38_RS15055 PF03972 MmgE/PrpD family LMD38_RS15060 PF00285 Citrate synthase, C-terminal domain LMD38_RS15065 PF01521 Iron-sulphur cluster biosynthesis LMD38_RS15070 PF07690 Major Facilitator Superfamily LMD38_RS15080 PF00912 Transglycosylase LMD38_RS15080 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS15110 PF10676 Spore germination protein gerPA/gerPF LMD38_RS15155 PF04542 Sigma-70 region 2 LMD38_RS15155 PF08281 Sigma-70, region 4 LMD38_RS15190 PF10668 Phage terminase small subunit LMD38_RS15190 PF03592 Terminase small subunit LMD38_RS15200 PF00085 Thioredoxin LMD38_RS15205 PF16916 Dimerisation domain of Zinc Transporter LMD38_RS15205 PF01545 Cation efflux family LMD38_RS15210 PF01569 PAP2 superfamily LMD38_RS15220 PF00069 Protein kinase domain LMD38_RS15220 PF08239 Bacterial SH3 domain LMD38_RS15230 PF14162 YozD-like protein LMD38_RS15245 PF06855 YozE SAM-like fold LMD38_RS15250 PF14122 YokU-like protein, putative antitoxin LMD38_RS15255 PF12544 Lysine-2,3-aminomutase LMD38_RS15260 PF00158 Sigma-54 interaction domain LMD38_RS15260 PF13426 PAS domain LMD38_RS15260 PF02954 Bacterial regulatory protein, Fis family LMD38_RS15265 PF00583 Acetyltransferase (GNAT) family LMD38_RS15270 PF07687 Peptidase dimerisation domain LMD38_RS15270 PF01546 Peptidase family M20/M25/M40 LMD38_RS15275 PF01144 Coenzyme A transferase LMD38_RS15280 PF01144 Coenzyme A transferase LMD38_RS15285 PF00202 Aminotransferase class-III LMD38_RS15295 PF09385 Histidine kinase N terminal LMD38_RS15300 PF07997 Protein of unknown function (DUF1694) LMD38_RS15305 PF00171 Aldehyde dehydrogenase family LMD38_RS15310 PF01595 Cyclin M transmembrane N-terminal domain LMD38_RS15310 PF03471 Transporter associated domain LMD38_RS15310 PF00571 CBS domain LMD38_RS15340 PF13520 Amino acid permease LMD38_RS15345 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS15350 PF00571 CBS domain LMD38_RS15350 PF00005 ABC transporter LMD38_RS15365 PF03358 NADPH-dependent FMN reductase LMD38_RS15385 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LMD38_RS15385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LMD38_RS15390 PF02447 GntP family permease LMD38_RS15395 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMD38_RS15395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMD38_RS15400 PF01037 Lrp/AsnC ligand binding domain LMD38_RS15425 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS15425 PF00107 Zinc-binding dehydrogenase LMD38_RS15430 PF01418 Helix-turn-helix domain, rpiR family LMD38_RS15430 PF01380 SIS domain LMD38_RS15435 PF11954 Domain of unknown function (DUF3471) LMD38_RS15435 PF00144 Beta-lactamase LMD38_RS15440 PF00072 Response regulator receiver domain LMD38_RS15440 PF00196 Bacterial regulatory proteins, luxR family LMD38_RS15445 PF13185 GAF domain LMD38_RS15445 PF07730 Histidine kinase LMD38_RS15450 PF00924 Mechanosensitive ion channel LMD38_RS15455 PF00011 Hsp20/alpha crystallin family LMD38_RS15460 PF00293 NUDIX domain LMD38_RS15465 PF00857 Isochorismatase family LMD38_RS15475 PF00881 Nitroreductase family LMD38_RS15480 PF01063 Amino-transferase class IV LMD38_RS15485 PF01497 Periplasmic binding protein LMD38_RS15500 PF13537 Glutamine amidotransferase domain LMD38_RS15500 PF00733 Asparagine synthase LMD38_RS15505 PF00011 Hsp20/alpha crystallin family LMD38_RS15510 PF02630 SCO1/SenC LMD38_RS15520 PF02645 Uncharacterised protein, DegV family COG1307 LMD38_RS15530 PF00902 Sec-independent protein translocase protein (TatC) LMD38_RS15535 PF02416 mttA/Hcf106 family LMD38_RS15540 PF03006 Haemolysin-III related LMD38_RS15545 PF01553 Acyltransferase LMD38_RS15550 PF02525 Flavodoxin-like fold LMD38_RS15555 PF05223 NTF2-like N-terminal transpeptidase domain LMD38_RS15555 PF03717 Penicillin-binding Protein dimerisation domain LMD38_RS15555 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS15560 PF00186 Dihydrofolate reductase LMD38_RS15565 PF00303 Thymidylate synthase LMD38_RS15570 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain LMD38_RS15570 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain LMD38_RS15570 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain LMD38_RS15570 PF08531 Alpha-L-rhamnosidase N-terminal domain LMD38_RS15575 PF00144 Beta-lactamase LMD38_RS15575 PF07930 D-aminopeptidase, domain B LMD38_RS15585 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS15590 PF14005 YpjP-like protein LMD38_RS15595 PF05975 Bacterial ABC transporter protein EcsB LMD38_RS15600 PF00005 ABC transporter LMD38_RS15615 PF00583 Acetyltransferase (GNAT) family LMD38_RS15620 PF01980 tRNA-methyltransferase O LMD38_RS15625 PF01177 Asp/Glu/Hydantoin racemase LMD38_RS15630 PF00465 Iron-containing alcohol dehydrogenase LMD38_RS15640 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS15645 PF10997 Alternate to MurJ LMD38_RS15660 PF00209 Sodium:neurotransmitter symporter family LMD38_RS15665 PF01336 OB-fold nucleic acid binding domain LMD38_RS15665 PF00152 tRNA synthetases class II (D, K and N) LMD38_RS15675 PF01609 Transposase DDE domain LMD38_RS15695 PF00133 tRNA synthetases class I (I, L, M and V) LMD38_RS15695 PF08264 Anticodon-binding domain of tRNA LMD38_RS15720 PF00750 tRNA synthetases class I (R) LMD38_RS15720 PF05746 DALR anticodon binding domain LMD38_RS15720 PF03485 Arginyl tRNA synthetase N terminal domain LMD38_RS15725 PF04445 Putative SAM-dependent methyltransferase LMD38_RS15730 PF06491 Disulphide isomerase LMD38_RS15740 PF08712 Scaffold protein Nfu/NifU N terminal LMD38_RS15740 PF13769 Virulence factor LMD38_RS15745 PF01494 FAD binding domain LMD38_RS15755 PF00436 Single-strand binding protein family LMD38_RS15770 PF12848 ABC transporter LMD38_RS15770 PF00005 ABC transporter LMD38_RS15770 PF16326 ABC transporter C-terminal domain LMD38_RS15775 PF01966 HD domain LMD38_RS15785 PF04232 Stage V sporulation protein S (SpoVS) LMD38_RS15830 PF07726 ATPase family associated with various cellular activities (AAA) LMD38_RS15830 PF17863 AAA lid domain LMD38_RS15835 PF01882 Protein of unknown function DUF58 LMD38_RS15840 PF01841 Transglutaminase-like superfamily LMD38_RS15840 PF13559 Domain of unknown function (DUF4129) LMD38_RS15840 PF11992 Domain of unknown function (DUF3488) LMD38_RS15845 PF00255 Glutathione peroxidase LMD38_RS15855 PF00258 Flavodoxin LMD38_RS15855 PF01613 Flavin reductase like domain LMD38_RS15870 PF04542 Sigma-70 region 2 LMD38_RS15870 PF08281 Sigma-70, region 4 LMD38_RS15875 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS15875 PF00107 Zinc-binding dehydrogenase LMD38_RS15885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS15890 PF01261 Xylose isomerase-like TIM barrel LMD38_RS15895 PF00270 DEAD/DEAH box helicase LMD38_RS15895 PF00271 Helicase conserved C-terminal domain LMD38_RS15905 PF01268 Formate--tetrahydrofolate ligase LMD38_RS15910 PF01209 ubiE/COQ5 methyltransferase family LMD38_RS15935 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LMD38_RS16025 PF12538 DNA transporter LMD38_RS16025 PF01580 FtsK/SpoIIIE family LMD38_RS16030 PF10140 WXG100 protein secretion system (Wss), protein YukC LMD38_RS16035 PF08817 WXG100 protein secretion system (Wss), protein YukD LMD38_RS16050 PF06013 Proteins of 100 residues with WXG LMD38_RS16065 PF00583 Acetyltransferase (GNAT) family LMD38_RS16095 PF00155 Aminotransferase class I and II LMD38_RS16095 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS16100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS16100 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LMD38_RS16105 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LMD38_RS16120 PF13847 Methyltransferase domain LMD38_RS16125 PF01168 Alanine racemase, N-terminal domain LMD38_RS16125 PF00842 Alanine racemase, C-terminal domain LMD38_RS16140 PF00300 Histidine phosphatase superfamily (branch 1) LMD38_RS16180 PF02374 Anion-transporting ATPase LMD38_RS16185 PF06953 Arsenical resistance operon trans-acting repressor ArsD LMD38_RS16190 PF01451 Low molecular weight phosphotyrosine protein phosphatase LMD38_RS16195 PF01022 Bacterial regulatory protein, arsR family LMD38_RS16205 PF01758 Sodium Bile acid symporter family LMD38_RS16250 PF07690 Major Facilitator Superfamily LMD38_RS16255 PF01425 Amidase LMD38_RS16265 PF02557 D-alanyl-D-alanine carboxypeptidase LMD38_RS16275 PF07454 Stage II sporulation protein P (SpoIIP) LMD38_RS16295 PF01588 Putative tRNA binding domain LMD38_RS16300 PF05525 Branched-chain amino acid transport protein LMD38_RS16315 PF01595 Cyclin M transmembrane N-terminal domain LMD38_RS16315 PF03471 Transporter associated domain LMD38_RS16315 PF00571 CBS domain LMD38_RS16320 PF04306 Protein of unknown function (DUF456) LMD38_RS16325 PF13460 NAD(P)H-binding LMD38_RS16340 PF13091 PLD-like domain LMD38_RS16350 PF03061 Thioesterase superfamily LMD38_RS16355 PF09323 Domain of unknown function (DUF1980) LMD38_RS16360 PF03773 Predicted permease LMD38_RS16370 PF01943 Polysaccharide biosynthesis protein LMD38_RS16370 PF14667 Polysaccharide biosynthesis C-terminal domain LMD38_RS16375 PF09335 SNARE associated Golgi protein LMD38_RS16380 PF00293 NUDIX domain LMD38_RS16385 PF08757 CotH kinase protein LMD38_RS16395 PF00300 Histidine phosphatase superfamily (branch 1) LMD38_RS16405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS16410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS16420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LMD38_RS16420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LMD38_RS16425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LMD38_RS16430 PF13460 NAD(P)H-binding LMD38_RS16440 PF01297 Zinc-uptake complex component A periplasmic LMD38_RS16440 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LMD38_RS16445 PF00583 Acetyltransferase (GNAT) family LMD38_RS16450 PF07683 Cobalamin synthesis protein cobW C-terminal domain LMD38_RS16450 PF02492 CobW/HypB/UreG, nucleotide-binding domain LMD38_RS16455 PF00248 Aldo/keto reductase family LMD38_RS16460 PF13302 Acetyltransferase (GNAT) domain LMD38_RS16465 PF01593 Flavin containing amine oxidoreductase LMD38_RS16475 PF00296 Luciferase-like monooxygenase LMD38_RS16485 PF00210 Ferritin-like domain LMD38_RS16505 PF00672 HAMP domain LMD38_RS16505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS16505 PF02743 Cache domain LMD38_RS16510 PF03193 RsgA GTPase LMD38_RS16530 PF07690 Major Facilitator Superfamily LMD38_RS16535 PF00248 Aldo/keto reductase family LMD38_RS16540 PF01022 Bacterial regulatory protein, arsR family LMD38_RS16545 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LMD38_RS16545 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LMD38_RS16550 PF12905 Endo-alpha-N-acetylgalactosaminidase LMD38_RS16550 PF17451 Glycosyl hydrolase 101 beta sandwich domain LMD38_RS16550 PF04650 YSIRK type signal peptide LMD38_RS16550 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal LMD38_RS16550 PF17974 Galactose-binding domain-like LMD38_RS16550 PF18080 Galactose mutarotase-like fold domain LMD38_RS16550 PF00754 F5/8 type C domain LMD38_RS16555 PF01791 DeoC/LacD family aldolase LMD38_RS16560 PF00294 pfkB family carbohydrate kinase LMD38_RS16565 PF01979 Amidohydrolase family LMD38_RS16570 PF01380 SIS domain LMD38_RS16575 PF00480 ROK family LMD38_RS16585 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain LMD38_RS16585 PF17386 Lacto-N-biose phosphorylase C-terminal domain LMD38_RS16585 PF17385 Lacto-N-biose phosphorylase central domain LMD38_RS16590 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS16595 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS16600 PF01547 Bacterial extracellular solute-binding protein LMD38_RS16605 PF12833 Helix-turn-helix domain LMD38_RS16610 PF13556 PucR C-terminal helix-turn-helix domain LMD38_RS16615 PF03459 TOBE domain LMD38_RS16615 PF17912 MalK OB fold domain LMD38_RS16615 PF00005 ABC transporter LMD38_RS16620 PF00082 Subtilase family LMD38_RS16625 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LMD38_RS16625 PF18277 AbrB C-terminal domain LMD38_RS16630 PF02687 FtsX-like permease family LMD38_RS16635 PF02540 NAD synthase LMD38_RS16640 PF13344 Haloacid dehalogenase-like hydrolase LMD38_RS16640 PF00293 NUDIX domain LMD38_RS16665 PF01734 Patatin-like phospholipase LMD38_RS16675 PF00155 Aminotransferase class I and II LMD38_RS16675 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS16680 PF01810 LysE type translocator LMD38_RS16685 PF07690 Major Facilitator Superfamily LMD38_RS16690 PF00269 Small, acid-soluble spore proteins, alpha/beta type LMD38_RS16695 PF00583 Acetyltransferase (GNAT) family LMD38_RS16700 PF02308 MgtC family LMD38_RS16710 PF01522 Polysaccharide deacetylase LMD38_RS16720 PF03816 Cell envelope-related transcriptional attenuator domain LMD38_RS16735 PF08544 GHMP kinases C terminal LMD38_RS16735 PF00288 GHMP kinases N terminal domain LMD38_RS16740 PF00291 Pyridoxal-phosphate dependent enzyme LMD38_RS16745 PF01842 ACT domain LMD38_RS16745 PF00742 Homoserine dehydrogenase LMD38_RS16745 PF03447 Homoserine dehydrogenase, NAD binding domain LMD38_RS16765 PF00293 NUDIX domain LMD38_RS16775 PF01522 Polysaccharide deacetylase LMD38_RS16780 PF04439 Streptomycin adenylyltransferase LMD38_RS16785 PF01596 O-methyltransferase LMD38_RS16790 PF00106 short chain dehydrogenase LMD38_RS16800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS16800 PF16736 Single Cache-like LMD38_RS16800 PF00989 PAS fold LMD38_RS16800 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS16805 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS16805 PF00072 Response regulator receiver domain LMD38_RS16810 PF00664 ABC transporter transmembrane region LMD38_RS16810 PF00005 ABC transporter LMD38_RS16820 PF01476 LysM domain LMD38_RS16820 PF00877 NlpC/P60 family LMD38_RS16835 PF07943 Penicillin-binding protein 5, C-terminal domain LMD38_RS16835 PF00768 D-alanyl-D-alanine carboxypeptidase LMD38_RS16865 PF00132 Bacterial transferase hexapeptide (six repeats) LMD38_RS16870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LMD38_RS16875 PF00535 Glycosyl transferase family 2 LMD38_RS16885 PF00664 ABC transporter transmembrane region LMD38_RS16885 PF00005 ABC transporter LMD38_RS16890 PF00664 ABC transporter transmembrane region LMD38_RS16890 PF00005 ABC transporter LMD38_RS16895 PF02322 Cytochrome bd terminal oxidase subunit II LMD38_RS16900 PF01654 Cytochrome bd terminal oxidase subunit I LMD38_RS16910 PF01047 MarR family LMD38_RS16920 PF14552 Tautomerase enzyme LMD38_RS16930 PF03466 LysR substrate binding domain LMD38_RS16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS16940 PF02653 Branched-chain amino acid transport system / permease component LMD38_RS16945 PF00005 ABC transporter LMD38_RS16950 PF12399 Branched-chain amino acid ATP-binding cassette transporter LMD38_RS16950 PF00005 ABC transporter LMD38_RS16965 PF01436 NHL repeat LMD38_RS16965 PF08450 SMP-30/Gluconolactonase/LRE-like region LMD38_RS16965 PF00069 Protein kinase domain LMD38_RS16970 PF01609 Transposase DDE domain LMD38_RS16975 PF00072 Response regulator receiver domain LMD38_RS16975 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS16980 PF00672 HAMP domain LMD38_RS16980 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS16990 PF02557 D-alanyl-D-alanine carboxypeptidase LMD38_RS17010 PF01609 Transposase DDE domain LMD38_RS17020 PF00580 UvrD/REP helicase N-terminal domain LMD38_RS17020 PF13361 UvrD-like helicase C-terminal domain LMD38_RS17025 PF02463 RecF/RecN/SMC N terminal domain LMD38_RS17035 PF02492 CobW/HypB/UreG, nucleotide-binding domain LMD38_RS17035 PF07683 Cobalamin synthesis protein cobW C-terminal domain LMD38_RS17040 PF01593 Flavin containing amine oxidoreductase LMD38_RS17045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LMD38_RS17045 PF00056 lactate/malate dehydrogenase, NAD binding domain LMD38_RS17050 PF01594 AI-2E family transporter LMD38_RS17055 PF01425 Amidase LMD38_RS17060 PF00881 Nitroreductase family LMD38_RS17065 PF01323 DSBA-like thioredoxin domain LMD38_RS17070 PF02082 Transcriptional regulator LMD38_RS17075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS17075 PF03466 LysR substrate binding domain LMD38_RS17080 PF00892 EamA-like transporter family LMD38_RS17085 PF07987 Domain of unkown function (DUF1775) LMD38_RS17090 PF13115 YtkA-like LMD38_RS17090 PF04234 CopC domain LMD38_RS17090 PF05425 Copper resistance protein D LMD38_RS17100 PF05525 Branched-chain amino acid transport protein LMD38_RS17105 PF02525 Flavodoxin-like fold LMD38_RS17115 PF07690 Major Facilitator Superfamily LMD38_RS17125 PF01396 Topoisomerase DNA binding C4 zinc finger LMD38_RS17125 PF13342 C-terminal repeat of topoisomerase LMD38_RS17125 PF01751 Toprim domain LMD38_RS17125 PF01131 DNA topoisomerase LMD38_RS17135 PF07731 Multicopper oxidase LMD38_RS17135 PF00394 Multicopper oxidase LMD38_RS17135 PF07732 Multicopper oxidase LMD38_RS17140 PF05195 Aminopeptidase P, N-terminal domain LMD38_RS17140 PF00557 Metallopeptidase family M24 LMD38_RS17145 PF05979 Bacterial protein of unknown function (DUF896) LMD38_RS17150 PF07301 Protein of unknown function (DUF1453) LMD38_RS17160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMD38_RS17165 PF02885 Glycosyl transferase family, helical bundle domain LMD38_RS17165 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LMD38_RS17165 PF00591 Glycosyl transferase family, a/b domain LMD38_RS17170 PF01773 Na+ dependent nucleoside transporter N-terminus LMD38_RS17170 PF07662 Na+ dependent nucleoside transporter C-terminus LMD38_RS17175 PF01791 DeoC/LacD family aldolase LMD38_RS17180 PF04198 Putative sugar-binding domain LMD38_RS17195 PF05791 Bacillus haemolytic enterotoxin (HBL) LMD38_RS17200 PF05791 Bacillus haemolytic enterotoxin (HBL) LMD38_RS17210 PF13520 Amino acid permease LMD38_RS17220 PF08546 Ketopantoate reductase PanE/ApbA C terminal LMD38_RS17220 PF02558 Ketopantoate reductase PanE/ApbA LMD38_RS17230 PF00581 Rhodanese-like domain LMD38_RS17230 PF12368 Rhodanase C-terminal LMD38_RS17230 PF17773 UPF0176 acylphosphatase like domain LMD38_RS17235 PF01566 Natural resistance-associated macrophage protein LMD38_RS17250 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS17250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS17255 PF00072 Response regulator receiver domain LMD38_RS17255 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS17260 PF13302 Acetyltransferase (GNAT) domain LMD38_RS17265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS17275 PF01979 Amidohydrolase family LMD38_RS17290 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LMD38_RS17290 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LMD38_RS17295 PF00072 Response regulator receiver domain LMD38_RS17295 PF04397 LytTr DNA-binding domain LMD38_RS17310 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LMD38_RS17320 PF07690 Major Facilitator Superfamily LMD38_RS17335 PF09587 Bacterial capsule synthesis protein PGA_cap LMD38_RS17345 PF00291 Pyridoxal-phosphate dependent enzyme LMD38_RS17345 PF00585 C-terminal regulatory domain of Threonine dehydratase LMD38_RS17350 PF00920 Dehydratase family LMD38_RS17355 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LMD38_RS17355 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LMD38_RS17365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMD38_RS17365 PF00205 Thiamine pyrophosphate enzyme, central domain LMD38_RS17365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMD38_RS17370 PF01063 Amino-transferase class IV LMD38_RS17380 PF01625 Peptide methionine sulfoxide reductase LMD38_RS17395 PF04239 Protein of unknown function (DUF421) LMD38_RS17405 PF03422 Carbohydrate binding module (family 6) LMD38_RS17405 PF00457 Glycosyl hydrolases family 11 LMD38_RS17405 PF01522 Polysaccharide deacetylase LMD38_RS17410 PF00209 Sodium:neurotransmitter symporter family LMD38_RS17415 PF01943 Polysaccharide biosynthesis protein LMD38_RS17415 PF14667 Polysaccharide biosynthesis C-terminal domain LMD38_RS17430 PF00291 Pyridoxal-phosphate dependent enzyme LMD38_RS17435 PF07690 Major Facilitator Superfamily LMD38_RS17440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS17445 PF16360 GTP-binding GTPase Middle Region LMD38_RS17445 PF01926 50S ribosome-binding GTPase LMD38_RS17445 PF13167 GTP-binding GTPase N-terminal LMD38_RS17455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LMD38_RS17455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LMD38_RS17460 PF07690 Major Facilitator Superfamily LMD38_RS17470 PF07690 Major Facilitator Superfamily LMD38_RS17475 PF03551 Transcriptional regulator PadR-like family LMD38_RS17475 PF10400 Virulence activator alpha C-term LMD38_RS17480 PF03976 Polyphosphate kinase 2 (PPK2) LMD38_RS17485 PF00480 ROK family LMD38_RS17490 PF00294 pfkB family carbohydrate kinase LMD38_RS17495 PF01116 Fructose-bisphosphate aldolase class-II LMD38_RS17500 PF01979 Amidohydrolase family LMD38_RS17505 PF01380 SIS domain LMD38_RS17510 PF07702 UTRA domain LMD38_RS17510 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS17520 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS17525 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS17530 PF01547 Bacterial extracellular solute-binding protein LMD38_RS17535 PF13556 PucR C-terminal helix-turn-helix domain LMD38_RS17540 PF03459 TOBE domain LMD38_RS17540 PF17912 MalK OB fold domain LMD38_RS17540 PF00005 ABC transporter LMD38_RS17555 PF07690 Major Facilitator Superfamily LMD38_RS17560 PF00293 NUDIX domain LMD38_RS17565 PF14158 YndJ-like protein LMD38_RS17580 PF00696 Amino acid kinase family LMD38_RS17580 PF13840 ACT domain LMD38_RS17590 PF01381 Helix-turn-helix LMD38_RS17595 PF03590 Aspartate-ammonia ligase LMD38_RS17605 PF00176 SNF2 family N-terminal domain LMD38_RS17605 PF00271 Helicase conserved C-terminal domain LMD38_RS17605 PF12419 SNF2 Helicase protein LMD38_RS17610 PF00963 Cohesin domain LMD38_RS17610 PF00395 S-layer homology domain LMD38_RS17620 PF00072 Response regulator receiver domain LMD38_RS17620 PF08664 YcbB domain LMD38_RS17625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS17630 PF03949 Malic enzyme, NAD binding domain LMD38_RS17630 PF00390 Malic enzyme, N-terminal domain LMD38_RS17635 PF10415 Fumarase C C-terminus LMD38_RS17635 PF00206 Lyase LMD38_RS17640 PF00375 Sodium:dicarboxylate symporter family LMD38_RS17645 PF00696 Amino acid kinase family LMD38_RS17650 PF13091 PLD-like domain LMD38_RS17670 PF00005 ABC transporter LMD38_RS17675 PF13492 GAF domain LMD38_RS17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS17675 PF07730 Histidine kinase LMD38_RS17675 PF13185 GAF domain LMD38_RS17680 PF00196 Bacterial regulatory proteins, luxR family LMD38_RS17680 PF00072 Response regulator receiver domain LMD38_RS17705 PF04286 Protein of unknown function (DUF445) LMD38_RS17715 PF00291 Pyridoxal-phosphate dependent enzyme LMD38_RS17735 PF00578 AhpC/TSA family LMD38_RS17755 PF03575 Peptidase family S51 LMD38_RS17760 PF01554 MatE LMD38_RS17775 PF00206 Lyase LMD38_RS17775 PF10415 Fumarase C C-terminus LMD38_RS17780 PF03553 Na+/H+ antiporter family LMD38_RS17785 PF00535 Glycosyl transferase family 2 LMD38_RS17800 PF02492 CobW/HypB/UreG, nucleotide-binding domain LMD38_RS17800 PF07683 Cobalamin synthesis protein cobW C-terminal domain LMD38_RS17805 PF00892 EamA-like transporter family LMD38_RS17810 PF07729 FCD domain LMD38_RS17810 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS17820 PF01545 Cation efflux family LMD38_RS17820 PF16916 Dimerisation domain of Zinc Transporter LMD38_RS17840 PF00733 Asparagine synthase LMD38_RS17840 PF13537 Glutamine amidotransferase domain LMD38_RS17850 PF01047 MarR family LMD38_RS17860 PF00561 alpha/beta hydrolase fold LMD38_RS17870 PF00300 Histidine phosphatase superfamily (branch 1) LMD38_RS17875 PF13021 Domain of unknown function (DUF3885) LMD38_RS17900 PF10787 Uncharacterised protein from bacillus cereus group LMD38_RS17910 PF00753 Metallo-beta-lactamase superfamily LMD38_RS17910 PF12706 Beta-lactamase superfamily domain LMD38_RS17915 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS17925 PF00005 ABC transporter LMD38_RS17925 PF08402 TOBE domain LMD38_RS17930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS17930 PF03466 LysR substrate binding domain LMD38_RS17950 PF08141 Small acid-soluble spore protein H family LMD38_RS17955 PF04203 Sortase domain LMD38_RS17960 PF04203 Sortase domain LMD38_RS17975 PF03992 Antibiotic biosynthesis monooxygenase LMD38_RS17990 PF17329 Family of unknown function (DUF5367) LMD38_RS17995 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS17995 PF17932 Tetracyclin repressor-like, C-terminal domain LMD38_RS18020 PF02272 DHHA1 domain LMD38_RS18020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LMD38_RS18020 PF01411 tRNA synthetases class II (A) LMD38_RS18025 PF00460 Flagella basal body rod protein LMD38_RS18025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMD38_RS18030 PF00448 SRP54-type protein, GTPase domain LMD38_RS18035 PF00771 FHIPEP family LMD38_RS18040 PF01312 FlhB HrpN YscU SpaS Family LMD38_RS18050 PF01313 Bacterial export proteins, family 3 LMD38_RS18055 PF00813 FliP family LMD38_RS18065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LMD38_RS18065 PF04509 CheC-like family LMD38_RS18070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LMD38_RS18070 PF02154 Flagellar motor switch protein FliM LMD38_RS18080 PF01464 Transglycosylase SLT domain LMD38_RS18085 PF00669 Bacterial flagellin N-terminal helical region LMD38_RS18085 PF00700 Bacterial flagellin C-terminal helical region LMD38_RS18095 PF12181 DNA binding domain of the motility gene repressor (MogR) LMD38_RS18100 PF01584 CheW-like domain LMD38_RS18100 PF00072 Response regulator receiver domain LMD38_RS18115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMD38_RS18115 PF00460 Flagella basal body rod protein LMD38_RS18115 PF07559 Flagellar basal body protein FlaE LMD38_RS18135 PF18269 T3SS EscN ATPase C-terminal domain LMD38_RS18135 PF02874 ATP synthase alpha/beta family, beta-barrel domain LMD38_RS18135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMD38_RS18145 PF14842 FliG N-terminal domain LMD38_RS18145 PF14841 FliG middle domain LMD38_RS18145 PF01706 FliG C-terminal domain LMD38_RS18150 PF01514 Secretory protein of YscJ/FliF family LMD38_RS18150 PF08345 Flagellar M-ring protein C-terminal LMD38_RS18155 PF02049 Flagellar hook-basal body complex protein FliE LMD38_RS18160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMD38_RS18160 PF00460 Flagella basal body rod protein LMD38_RS18165 PF00460 Flagella basal body rod protein LMD38_RS18190 PF00460 Flagella basal body rod protein LMD38_RS18190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMD38_RS18210 PF03705 CheR methyltransferase, all-alpha domain LMD38_RS18210 PF01739 CheR methyltransferase, SAM binding domain LMD38_RS18225 PF04509 CheC-like family LMD38_RS18225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LMD38_RS18230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS18230 PF01627 Hpt domain LMD38_RS18230 PF07194 P2 response regulator binding domain LMD38_RS18230 PF01584 CheW-like domain LMD38_RS18230 PF02895 Signal transducing histidine kinase, homodimeric domain LMD38_RS18235 PF00072 Response regulator receiver domain LMD38_RS18240 PF13677 Membrane MotB of proton-channel complex MotA/MotB LMD38_RS18240 PF00691 OmpA family LMD38_RS18245 PF01618 MotA/TolQ/ExbB proton channel family LMD38_RS18255 PF17209 Hfq protein LMD38_RS18275 PF07690 Major Facilitator Superfamily LMD38_RS18305 PF00881 Nitroreductase family LMD38_RS18315 PF02698 DUF218 domain LMD38_RS18320 PF04239 Protein of unknown function (DUF421) LMD38_RS18330 PF06445 GyrI-like small molecule binding domain LMD38_RS18330 PF13411 MerR HTH family regulatory protein LMD38_RS18335 PF00753 Metallo-beta-lactamase superfamily LMD38_RS18335 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LMD38_RS18335 PF17770 Ribonuclease J C-terminal domain LMD38_RS18340 PF00999 Sodium/hydrogen exchanger family LMD38_RS18350 PF00202 Aminotransferase class-III LMD38_RS18355 PF00474 Sodium:solute symporter family LMD38_RS18360 PF04341 Protein of unknown function, DUF485 LMD38_RS18375 PF01810 LysE type translocator LMD38_RS18380 PF08892 YqcI/YcgG family LMD38_RS18385 PF00313 'Cold-shock' DNA-binding domain LMD38_RS18410 PF01263 Aldose 1-epimerase LMD38_RS18415 PF13456 Reverse transcriptase-like LMD38_RS18435 PF13673 Acetyltransferase (GNAT) domain LMD38_RS18435 PF18014 Acetyltransferase (GNAT) domain LMD38_RS18450 PF01367 5'-3' exonuclease, C-terminal SAM fold LMD38_RS18450 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LMD38_RS18455 PF00690 Cation transporter/ATPase, N-terminus LMD38_RS18455 PF00689 Cation transporting ATPase, C-terminus LMD38_RS18480 PF00581 Rhodanese-like domain LMD38_RS18485 PF10752 Protein of unknown function (DUF2533) LMD38_RS18490 PF00583 Acetyltransferase (GNAT) family LMD38_RS18500 PF00350 Dynamin family LMD38_RS18505 PF04235 Protein of unknown function (DUF418) LMD38_RS18510 PF00860 Permease family LMD38_RS18515 PF00156 Phosphoribosyl transferase domain LMD38_RS18520 PF00557 Metallopeptidase family M24 LMD38_RS18530 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LMD38_RS18535 PF13307 Helicase C-terminal domain LMD38_RS18545 PF02926 THUMP domain LMD38_RS18545 PF01170 Putative RNA methylase family UPF0020 LMD38_RS18555 PF05103 DivIVA protein LMD38_RS18560 PF06908 YspA SLOG family LMD38_RS18595 PF10720 Protein of unknown function (DUF2515) LMD38_RS18600 PF03838 Recombination protein U LMD38_RS18605 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS18605 PF00912 Transglycosylase LMD38_RS18615 PF10576 Iron-sulfur binding domain of endonuclease III LMD38_RS18615 PF00633 Helix-hairpin-helix motif LMD38_RS18615 PF00730 HhH-GPD superfamily base excision DNA repair protein LMD38_RS18620 PF07261 Replication initiation and membrane attachment LMD38_RS18625 PF00155 Aminotransferase class I and II LMD38_RS18635 PF14084 Protein of unknown function (DUF4264) LMD38_RS18640 PF13307 Helicase C-terminal domain LMD38_RS18640 PF04851 Type III restriction enzyme, res subunit LMD38_RS18640 PF00929 Exonuclease LMD38_RS18645 PF02261 Aspartate decarboxylase LMD38_RS18650 PF02569 Pantoate-beta-alanine ligase LMD38_RS18655 PF02548 Ketopantoate hydroxymethyltransferase LMD38_RS18665 PF02237 Biotin protein ligase C terminal domain LMD38_RS18665 PF03099 Biotin/lipoate A/B protein ligase family LMD38_RS18665 PF08279 HTH domain LMD38_RS18670 PF01743 Poly A polymerase head domain LMD38_RS18670 PF12627 Probable RNA and SrmB- binding site of polymerase A LMD38_RS18670 PF13735 tRNA nucleotidyltransferase domain 2 putative LMD38_RS18675 PF00534 Glycosyl transferases group 1 LMD38_RS18675 PF13439 Glycosyltransferase Family 4 LMD38_RS18680 PF02585 GlcNAc-PI de-N-acetylase LMD38_RS18685 PF02142 MGS-like domain LMD38_RS18690 PF05173 Dihydrodipicolinate reductase, C-terminus LMD38_RS18690 PF01113 Dihydrodipicolinate reductase, N-terminus LMD38_RS18695 PF03819 MazG nucleotide pyrophosphohydrolase domain LMD38_RS18700 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS18700 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LMD38_RS18710 PF04298 Putative neutral zinc metallopeptidase LMD38_RS18715 PF09577 Sporulation protein YpjB (SpoYpjB) LMD38_RS18725 PF07187 Protein of unknown function (DUF1405) LMD38_RS18730 PF00032 Cytochrome b(C-terminal)/b6/petD LMD38_RS18730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LMD38_RS18735 PF00033 Cytochrome b/b6/petB LMD38_RS18740 PF00355 Rieske [2Fe-2S] domain LMD38_RS18745 PF10673 Protein of unknown function (DUF2487) LMD38_RS18750 PF08864 UPF0302 domain LMD38_RS18750 PF08858 IDEAL domain LMD38_RS18760 PF00155 Aminotransferase class I and II LMD38_RS18765 PF01761 3-dehydroquinate synthase LMD38_RS18770 PF01264 Chorismate synthase LMD38_RS18775 PF00334 Nucleoside diphosphate kinase LMD38_RS18780 PF00348 Polyprenyl synthetase LMD38_RS18785 PF01209 ubiE/COQ5 methyltransferase family LMD38_RS18790 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LMD38_RS18795 PF01227 GTP cyclohydrolase I LMD38_RS18800 PF00216 Bacterial DNA-binding protein LMD38_RS18805 PF09547 Stage IV sporulation protein A (spore_IV_A) LMD38_RS18815 PF10966 Protein of unknown function (DUF2768) LMD38_RS18825 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LMD38_RS18825 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LMD38_RS18830 PF01926 50S ribosome-binding GTPase LMD38_RS18830 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LMD38_RS18840 PF14045 YIEGIA protein LMD38_RS18850 PF14140 YpzI-like protein LMD38_RS18855 PF01070 FMN-dependent dehydrogenase LMD38_RS18860 PF00575 S1 RNA binding domain LMD38_RS18865 PF02224 Cytidylate kinase LMD38_RS18875 PF17763 Glutaminase/Asparaginase C-terminal domain LMD38_RS18875 PF00710 Asparaginase, N-terminal LMD38_RS18900 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LMD38_RS18900 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LMD38_RS18905 PF05389 Negative regulator of genetic competence (MecA) LMD38_RS18910 PF13411 MerR HTH family regulatory protein LMD38_RS18910 PF02310 B12 binding domain LMD38_RS18910 PF02607 B12 binding domain LMD38_RS18915 PF00149 Calcineurin-like phosphoesterase LMD38_RS18925 PF02517 CPBP intramembrane metalloprotease LMD38_RS18930 PF00270 DEAD/DEAH box helicase LMD38_RS18930 PF00271 Helicase conserved C-terminal domain LMD38_RS18945 PF12822 ECF transporter, substrate-specific component LMD38_RS18955 PF01551 Peptidase family M23 LMD38_RS18960 PF01923 Cobalamin adenosyltransferase LMD38_RS18965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS18965 PF00672 HAMP domain LMD38_RS18965 PF18698 Histidine kinase sensor domain LMD38_RS18965 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS18965 PF00989 PAS fold LMD38_RS18970 PF00072 Response regulator receiver domain LMD38_RS18970 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS18975 PF01578 Cytochrome C assembly protein LMD38_RS18980 PF05140 ResB-like family LMD38_RS18985 PF00578 AhpC/TSA family LMD38_RS18990 PF00849 RNA pseudouridylate synthase LMD38_RS18990 PF01479 S4 domain LMD38_RS18995 PF07670 Nucleoside recognition LMD38_RS19000 PF07670 Nucleoside recognition LMD38_RS19005 PF07943 Penicillin-binding protein 5, C-terminal domain LMD38_RS19005 PF00768 D-alanyl-D-alanine carboxypeptidase LMD38_RS19010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LMD38_RS19010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LMD38_RS19025 PF09924 Uncharacterised conserved protein (DUF2156) LMD38_RS19025 PF03706 Lysylphosphatidylglycerol synthase TM region LMD38_RS19040 PF01048 Phosphorylase superfamily LMD38_RS19045 PF00989 PAS fold LMD38_RS19045 PF16736 Single Cache-like LMD38_RS19045 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS19045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS19050 PF00589 Phage integrase family LMD38_RS19060 PF01904 Protein of unknown function DUF72 LMD38_RS19065 PF00989 PAS fold LMD38_RS19065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS19065 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS19080 PF00912 Transglycosylase LMD38_RS19080 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS19085 PF01865 Protein of unknown function DUF47 LMD38_RS19090 PF01384 Phosphate transporter family LMD38_RS19095 PF01925 Sulfite exporter TauE/SafE LMD38_RS19110 PF00970 Oxidoreductase FAD-binding domain LMD38_RS19110 PF00042 Globin LMD38_RS19110 PF00175 Oxidoreductase NAD-binding domain LMD38_RS19130 PF08241 Methyltransferase domain LMD38_RS19140 PF05525 Branched-chain amino acid transport protein LMD38_RS19150 PF00196 Bacterial regulatory proteins, luxR family LMD38_RS19150 PF00072 Response regulator receiver domain LMD38_RS19155 PF00672 HAMP domain LMD38_RS19155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS19155 PF07730 Histidine kinase LMD38_RS19160 PF09922 Cell wall-active antibiotics response 4TMS YvqF LMD38_RS19175 PF03553 Na+/H+ antiporter family LMD38_RS19185 PF00375 Sodium:dicarboxylate symporter family LMD38_RS19200 PF00209 Sodium:neurotransmitter symporter family LMD38_RS19210 PF01903 CbiX LMD38_RS19215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LMD38_RS19225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LMD38_RS19225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LMD38_RS19235 PF14306 PUA-like domain LMD38_RS19235 PF01747 ATP-sulfurylase LMD38_RS19240 PF01507 Phosphoadenosine phosphosulfate reductase family LMD38_RS19250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LMD38_RS19250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LMD38_RS19260 PF00884 Sulfatase LMD38_RS19265 PF01066 CDP-alcohol phosphatidyltransferase LMD38_RS19270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMD38_RS19270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMD38_RS19280 PF02811 PHP domain LMD38_RS19285 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LMD38_RS19290 PF01502 Phosphoribosyl-AMP cyclohydrolase LMD38_RS19295 PF00977 Histidine biosynthesis protein LMD38_RS19300 PF00977 Histidine biosynthesis protein LMD38_RS19305 PF00117 Glutamine amidotransferase class-I LMD38_RS19310 PF00475 Imidazoleglycerol-phosphate dehydratase LMD38_RS19315 PF00815 Histidinol dehydrogenase LMD38_RS19320 PF01634 ATP phosphoribosyltransferase LMD38_RS19325 PF13393 Histidyl-tRNA synthetase LMD38_RS19330 PF00694 Aconitase C-terminal domain LMD38_RS19335 PF00330 Aconitase family (aconitate hydratase) LMD38_RS19340 PF00180 Isocitrate/isopropylmalate dehydrogenase LMD38_RS19345 PF00682 HMGL-like LMD38_RS19345 PF08502 LeuA allosteric (dimerisation) domain LMD38_RS19350 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LMD38_RS19350 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LMD38_RS19355 PF10369 Small subunit of acetolactate synthase LMD38_RS19355 PF01842 ACT domain LMD38_RS19360 PF00205 Thiamine pyrophosphate enzyme, central domain LMD38_RS19360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMD38_RS19360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMD38_RS19365 PF01063 Amino-transferase class IV LMD38_RS19375 PF03698 Uncharacterised protein family (UPF0180) LMD38_RS19385 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LMD38_RS19395 PF02386 Cation transport protein LMD38_RS19400 PF00375 Sodium:dicarboxylate symporter family LMD38_RS19410 PF01047 MarR family LMD38_RS19425 PF02673 Bacitracin resistance protein BacA LMD38_RS19430 PF01554 MatE LMD38_RS19450 PF01636 Phosphotransferase enzyme family LMD38_RS19465 PF00258 Flavodoxin LMD38_RS19475 PF01546 Peptidase family M20/M25/M40 LMD38_RS19475 PF07687 Peptidase dimerisation domain LMD38_RS19485 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS19485 PF00501 AMP-binding enzyme LMD38_RS19490 PF03062 MBOAT, membrane-bound O-acyltransferase family LMD38_RS19495 PF00550 Phosphopantetheine attachment site LMD38_RS19500 PF04914 DltD protein LMD38_RS19505 PF03060 Nitronate monooxygenase LMD38_RS19510 PF17676 LD-carboxypeptidase C-terminal domain LMD38_RS19510 PF02016 LD-carboxypeptidase N-terminal domain LMD38_RS19525 PF01037 Lrp/AsnC ligand binding domain LMD38_RS19545 PF00005 ABC transporter LMD38_RS19555 PF00005 ABC transporter LMD38_RS19560 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS19600 PF07972 NrdI Flavodoxin like LMD38_RS19630 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LMD38_RS19635 PF14489 QueF-like protein LMD38_RS19640 PF04055 Radical SAM superfamily LMD38_RS19645 PF01242 6-pyruvoyl tetrahydropterin synthase LMD38_RS19650 PF06508 Queuosine biosynthesis protein QueC LMD38_RS19655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS19655 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS19655 PF00989 PAS fold LMD38_RS19655 PF13188 PAS domain LMD38_RS19655 PF13426 PAS domain LMD38_RS19665 PF12867 DinB superfamily LMD38_RS19675 PF01047 MarR family LMD38_RS19680 PF02743 Cache domain LMD38_RS19680 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS19680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS19685 PF09388 Spo0E like sporulation regulatory protein LMD38_RS19690 PF04748 Divergent polysaccharide deacetylase LMD38_RS19700 PF00596 Class II Aldolase and Adducin N-terminal domain LMD38_RS19705 PF00395 S-layer homology domain LMD38_RS19705 PF01520 N-acetylmuramoyl-L-alanine amidase LMD38_RS19710 PF00455 DeoR C terminal sensor domain LMD38_RS19710 PF08220 DeoR-like helix-turn-helix domain LMD38_RS19720 PF00266 Aminotransferase class-V LMD38_RS19725 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS19730 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS19735 PF08402 TOBE domain LMD38_RS19735 PF00005 ABC transporter LMD38_RS19755 PF02386 Cation transport protein LMD38_RS19765 PF00561 alpha/beta hydrolase fold LMD38_RS19790 PF01575 MaoC like domain LMD38_RS19795 PF00269 Small, acid-soluble spore proteins, alpha/beta type LMD38_RS19800 PF02386 Cation transport protein LMD38_RS19805 PF03741 Integral membrane protein TerC family LMD38_RS19810 PF01226 Formate/nitrite transporter LMD38_RS19820 PF01478 Type IV leader peptidase family LMD38_RS19820 PF06750 Bacterial Peptidase A24 N-terminal domain LMD38_RS19825 PF02589 LUD domain LMD38_RS19830 PF02589 LUD domain LMD38_RS19830 PF13183 4Fe-4S dicluster domain LMD38_RS19830 PF11870 Domain of unknown function (DUF3390) LMD38_RS19835 PF02754 Cysteine-rich domain LMD38_RS19840 PF07729 FCD domain LMD38_RS19840 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS19845 PF00989 PAS fold LMD38_RS19845 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS19845 PF18698 Histidine kinase sensor domain LMD38_RS19845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS19845 PF00672 HAMP domain LMD38_RS19850 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS19850 PF00072 Response regulator receiver domain LMD38_RS19860 PF13556 PucR C-terminal helix-turn-helix domain LMD38_RS19860 PF17853 GGDEF-like domain LMD38_RS19860 PF05651 Putative sugar diacid recognition LMD38_RS19865 PF01565 FAD binding domain LMD38_RS19865 PF02913 FAD linked oxidases, C-terminal domain LMD38_RS19870 PF13183 4Fe-4S dicluster domain LMD38_RS19870 PF02754 Cysteine-rich domain LMD38_RS19875 PF00188 Cysteine-rich secretory protein family LMD38_RS19885 PF01479 S4 domain LMD38_RS19885 PF00849 RNA pseudouridylate synthase LMD38_RS19895 PF03176 MMPL family LMD38_RS19905 PF13416 Bacterial extracellular solute-binding protein LMD38_RS19910 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS19915 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS19920 PF08402 TOBE domain LMD38_RS19920 PF00005 ABC transporter LMD38_RS19925 PF00171 Aldehyde dehydrogenase family LMD38_RS19935 PF01609 Transposase DDE domain LMD38_RS19950 PF01381 Helix-turn-helix LMD38_RS19950 PF08671 Anti-repressor SinI LMD38_RS19955 PF12389 Camelysin metallo-endopeptidase LMD38_RS19965 PF12389 Camelysin metallo-endopeptidase LMD38_RS19975 PF07943 Penicillin-binding protein 5, C-terminal domain LMD38_RS19975 PF00768 D-alanyl-D-alanine carboxypeptidase LMD38_RS19995 PF00589 Phage integrase family LMD38_RS19995 PF02899 Phage integrase, N-terminal SAM-like domain LMD38_RS20105 PF01381 Helix-turn-helix LMD38_RS20110 PF00676 Dehydrogenase E1 component LMD38_RS20110 PF16870 2-oxoglutarate dehydrogenase C-terminal LMD38_RS20110 PF02779 Transketolase, pyrimidine binding domain LMD38_RS20115 PF02817 e3 binding domain LMD38_RS20115 PF00364 Biotin-requiring enzyme LMD38_RS20115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LMD38_RS20135 PF01209 ubiE/COQ5 methyltransferase family LMD38_RS20150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMD38_RS20150 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS20170 PF10042 Uncharacterized conserved protein (DUF2278) LMD38_RS20180 PF02652 L-lactate permease LMD38_RS20190 PF00290 Tryptophan synthase alpha chain LMD38_RS20195 PF00291 Pyridoxal-phosphate dependent enzyme LMD38_RS20200 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LMD38_RS20205 PF00218 Indole-3-glycerol phosphate synthase LMD38_RS20210 PF00591 Glycosyl transferase family, a/b domain LMD38_RS20210 PF02885 Glycosyl transferase family, helical bundle domain LMD38_RS20215 PF00591 Glycosyl transferase family, a/b domain LMD38_RS20215 PF02885 Glycosyl transferase family, helical bundle domain LMD38_RS20215 PF00117 Glutamine amidotransferase class-I LMD38_RS20220 PF04715 Anthranilate synthase component I, N terminal region LMD38_RS20220 PF00425 chorismate binding enzyme LMD38_RS20225 PF00474 Sodium:solute symporter family LMD38_RS20230 PF02368 Bacterial Ig-like domain (group 2) LMD38_RS20245 PF00756 Putative esterase LMD38_RS20255 PF13673 Acetyltransferase (GNAT) domain LMD38_RS20260 PF13361 UvrD-like helicase C-terminal domain LMD38_RS20260 PF00580 UvrD/REP helicase N-terminal domain LMD38_RS20285 PF07098 Protein of unknown function (DUF1360) LMD38_RS20305 PF04321 RmlD substrate binding domain LMD38_RS20310 PF16363 GDP-mannose 4,6 dehydratase LMD38_RS20315 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LMD38_RS20320 PF00483 Nucleotidyl transferase LMD38_RS20340 PF00535 Glycosyl transferase family 2 LMD38_RS20340 PF13181 Tetratricopeptide repeat LMD38_RS20350 PF05711 Macrocin-O-methyltransferase (TylF) LMD38_RS20355 PF08241 Methyltransferase domain LMD38_RS20360 PF00535 Glycosyl transferase family 2 LMD38_RS20365 PF01098 Cell cycle protein LMD38_RS20370 PF00149 Calcineurin-like phosphoesterase LMD38_RS20380 PF00849 RNA pseudouridylate synthase LMD38_RS20385 PF01513 ATP-NAD kinase LMD38_RS20390 PF04607 Region found in RelA / SpoT proteins LMD38_RS20400 PF01928 CYTH domain LMD38_RS20405 PF01152 Bacterial-like globin LMD38_RS20420 PF08439 Oligopeptidase F LMD38_RS20420 PF01432 Peptidase family M3 LMD38_RS20430 PF13091 PLD-like domain LMD38_RS20430 PF13396 Phospholipase_D-nuclease N-terminal LMD38_RS20435 PF05389 Negative regulator of genetic competence (MecA) LMD38_RS20440 PF03741 Integral membrane protein TerC family LMD38_RS20445 PF03960 ArsC family LMD38_RS20455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS20460 PF01554 MatE LMD38_RS20480 PF00005 ABC transporter LMD38_RS20480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMD38_RS20485 PF00005 ABC transporter LMD38_RS20485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMD38_RS20490 PF12911 N-terminal TM domain of oligopeptide transport permease C LMD38_RS20490 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS20495 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS20500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS20510 PF00579 tRNA synthetases class I (W and Y) LMD38_RS20515 PF12227 Protein of unknown function (DUF3603) LMD38_RS20520 PF10026 Predicted Zn-dependent protease (DUF2268) LMD38_RS20525 PF02801 Beta-ketoacyl synthase, C-terminal domain LMD38_RS20525 PF00109 Beta-ketoacyl synthase, N-terminal domain LMD38_RS20530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LMD38_RS20530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LMD38_RS20535 PF10815 ComZ LMD38_RS20560 PF10431 C-terminal, D2-small domain, of ClpB protein LMD38_RS20560 PF02861 Clp amino terminal domain, pathogenicity island component LMD38_RS20560 PF07724 AAA domain (Cdc48 subfamily) LMD38_RS20560 PF00004 ATPase family associated with various cellular activities (AAA) LMD38_RS20560 PF17871 AAA lid domain LMD38_RS20565 PF14168 YjzC-like protein LMD38_RS20580 PF12758 Protein of unknown function (DUF3813) LMD38_RS20585 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS20585 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LMD38_RS20595 PF00639 PPIC-type PPIASE domain LMD38_RS20600 PF17783 CvfB-like winged helix domain LMD38_RS20600 PF13509 S1 domain LMD38_RS20605 PF04461 Protein of unknown function (DUF520) LMD38_RS20615 PF00128 Alpha amylase, catalytic domain LMD38_RS20620 PF00909 Ammonium Transporter Family LMD38_RS20625 PF06803 Protein of unknown function (DUF1232) LMD38_RS20645 PF00689 Cation transporting ATPase, C-terminus LMD38_RS20645 PF00690 Cation transporter/ATPase, N-terminus LMD38_RS20660 PF00199 Catalase LMD38_RS20660 PF06628 Catalase-related immune-responsive LMD38_RS20665 PF00762 Ferrochelatase LMD38_RS20670 PF00733 Asparagine synthase LMD38_RS20670 PF13537 Glutamine amidotransferase domain LMD38_RS20680 PF07457 Protein of unknown function (DUF1516) LMD38_RS20685 PF00202 Aminotransferase class-III LMD38_RS20695 PF01557 Fumarylacetoacetate (FAA) hydrolase family LMD38_RS20700 PF09388 Spo0E like sporulation regulatory protein LMD38_RS20705 PF10676 Spore germination protein gerPA/gerPF LMD38_RS20710 PF10803 Spore germination GerPB LMD38_RS20715 PF10737 Spore germination protein GerPC LMD38_RS20725 PF10970 Spore germination protein GerPE LMD38_RS20730 PF10676 Spore germination protein gerPA/gerPF LMD38_RS20740 PF00580 UvrD/REP helicase N-terminal domain LMD38_RS20740 PF13361 UvrD-like helicase C-terminal domain LMD38_RS20740 PF12705 PD-(D/E)XK nuclease superfamily LMD38_RS20745 PF12705 PD-(D/E)XK nuclease superfamily LMD38_RS20745 PF13361 UvrD-like helicase C-terminal domain LMD38_RS20750 PF10502 Signal peptidase, peptidase S26 LMD38_RS20755 PF09335 SNARE associated Golgi protein LMD38_RS20765 PF06338 ComK protein LMD38_RS20780 PF00313 'Cold-shock' DNA-binding domain LMD38_RS20790 PF00463 Isocitrate lyase family LMD38_RS20795 PF01274 Malate synthase LMD38_RS20810 PF00892 EamA-like transporter family LMD38_RS20815 PF16491 CAAX prenyl protease N-terminal, five membrane helices LMD38_RS20815 PF01435 Peptidase family M48 LMD38_RS20840 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS20840 PF00072 Response regulator receiver domain LMD38_RS20845 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS20845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS20850 PF06445 GyrI-like small molecule binding domain LMD38_RS20850 PF12833 Helix-turn-helix domain LMD38_RS20855 PF04542 Sigma-70 region 2 LMD38_RS20855 PF08281 Sigma-70, region 4 LMD38_RS20865 PF01966 HD domain LMD38_RS20870 PF00149 Calcineurin-like phosphoesterase LMD38_RS20875 PF12146 Serine aminopeptidase, S33 LMD38_RS20935 PF05593 RHS Repeat LMD38_RS20960 PF05593 RHS Repeat LMD38_RS20965 PF12857 TOBE-like domain LMD38_RS20965 PF17850 CysA C-terminal regulatory domain LMD38_RS20965 PF00005 ABC transporter LMD38_RS20970 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS20975 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS20985 PF00395 S-layer homology domain LMD38_RS20985 PF01520 N-acetylmuramoyl-L-alanine amidase LMD38_RS20995 PF00501 AMP-binding enzyme LMD38_RS20995 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS21005 PF10437 Bacterial lipoate protein ligase C-terminus LMD38_RS21005 PF03099 Biotin/lipoate A/B protein ligase family LMD38_RS21010 PF12706 Beta-lactamase superfamily domain LMD38_RS21015 PF14149 YhfH-like protein LMD38_RS21020 PF00356 Bacterial regulatory proteins, lacI family LMD38_RS21025 PF08279 HTH domain LMD38_RS21025 PF13280 WYL domain LMD38_RS21065 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS21065 PF17932 Tetracyclin repressor-like, C-terminal domain LMD38_RS21075 PF03965 Penicillinase repressor LMD38_RS21105 PF01593 Flavin containing amine oxidoreductase LMD38_RS21110 PF00762 Ferrochelatase LMD38_RS21115 PF01208 Uroporphyrinogen decarboxylase (URO-D) LMD38_RS21120 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS21120 PF00912 Transglycosylase LMD38_RS21125 PF03992 Antibiotic biosynthesis monooxygenase LMD38_RS21130 PF03703 Bacterial PH domain LMD38_RS21135 PF03703 Bacterial PH domain LMD38_RS21165 PF03703 Bacterial PH domain LMD38_RS21170 PF03703 Bacterial PH domain LMD38_RS21180 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS21180 PF17934 Tetracyclin repressor-like, C-terminal domain LMD38_RS21190 PF12787 EcsC protein family LMD38_RS21195 PF05975 Bacterial ABC transporter protein EcsB LMD38_RS21200 PF00005 ABC transporter LMD38_RS21205 PF01230 HIT domain LMD38_RS21210 PF12732 YtxH-like protein LMD38_RS21215 PF01047 MarR family LMD38_RS21235 PF13538 UvrD-like helicase C-terminal domain LMD38_RS21250 PF01098 Cell cycle protein LMD38_RS21260 PF08281 Sigma-70, region 4 LMD38_RS21260 PF04542 Sigma-70 region 2 LMD38_RS21275 PF01266 FAD dependent oxidoreductase LMD38_RS21275 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LMD38_RS21280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMD38_RS21280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMD38_RS21285 PF00230 Major intrinsic protein LMD38_RS21290 PF04309 Glycerol-3-phosphate responsive antiterminator LMD38_RS21300 PF08386 TAP-like protein LMD38_RS21300 PF00561 alpha/beta hydrolase fold LMD38_RS21310 PF18801 response regulator aspartate phosphatase H, N terminal LMD38_RS21320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS21325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS21335 PF01336 OB-fold nucleic acid binding domain LMD38_RS21335 PF01966 HD domain LMD38_RS21340 PF13514 AAA domain LMD38_RS21345 PF00149 Calcineurin-like phosphoesterase LMD38_RS21360 PF11121 Protein of unknown function (DUF2639) LMD38_RS21375 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS21375 PF00107 Zinc-binding dehydrogenase LMD38_RS21390 PF01906 Putative heavy-metal-binding LMD38_RS21415 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS21415 PF00072 Response regulator receiver domain LMD38_RS21415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LMD38_RS21415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS21415 PF00672 HAMP domain LMD38_RS21415 PF01627 Hpt domain LMD38_RS21420 PF01739 CheR methyltransferase, SAM binding domain LMD38_RS21420 PF03705 CheR methyltransferase, all-alpha domain LMD38_RS21425 PF13426 PAS domain LMD38_RS21425 PF07228 Stage II sporulation protein E (SpoIIE) LMD38_RS21460 PF00005 ABC transporter LMD38_RS21460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMD38_RS21465 PF00005 ABC transporter LMD38_RS21465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMD38_RS21470 PF12911 N-terminal TM domain of oligopeptide transport permease C LMD38_RS21470 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS21475 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS21480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS21495 PF02423 Ornithine cyclodeaminase/mu-crystallin family LMD38_RS21500 PF05544 Proline racemase LMD38_RS21505 PF11121 Protein of unknown function (DUF2639) LMD38_RS21510 PF01522 Polysaccharide deacetylase LMD38_RS21515 PF01695 IstB-like ATP binding protein LMD38_RS21520 PF00665 Integrase core domain LMD38_RS21520 PF02796 Helix-turn-helix domain of resolvase LMD38_RS21525 PF12833 Helix-turn-helix domain LMD38_RS21525 PF06445 GyrI-like small molecule binding domain LMD38_RS21530 PF11208 Protein of unknown function (DUF2992) LMD38_RS21540 PF02899 Phage integrase, N-terminal SAM-like domain LMD38_RS21540 PF00589 Phage integrase family LMD38_RS21545 PF02899 Phage integrase, N-terminal SAM-like domain LMD38_RS21545 PF00589 Phage integrase family LMD38_RS21555 PF01520 N-acetylmuramoyl-L-alanine amidase LMD38_RS21555 PF00395 S-layer homology domain LMD38_RS21560 PF05343 M42 glutamyl aminopeptidase LMD38_RS21580 PF00378 Enoyl-CoA hydratase/isomerase LMD38_RS21590 PF00395 S-layer homology domain LMD38_RS21595 PF01473 Putative cell wall binding repeat LMD38_RS21595 PF17890 Peptidoglycan hydrolase LytB WW-like domain LMD38_RS21595 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain LMD38_RS21595 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LMD38_RS21610 PF01943 Polysaccharide biosynthesis protein LMD38_RS21610 PF14667 Polysaccharide biosynthesis C-terminal domain LMD38_RS21615 PF07516 SecA Wing and Scaffold domain LMD38_RS21615 PF01043 SecA preprotein cross-linking domain LMD38_RS21615 PF07517 SecA DEAD-like domain LMD38_RS21630 PF01740 STAS domain LMD38_RS21630 PF00916 Sulfate permease family LMD38_RS21640 PF17802 Prealbumin-like fold domain LMD38_RS21640 PF05737 Collagen binding domain LMD38_RS21640 PF05738 Cna protein B-type domain LMD38_RS21645 PF13193 AMP-binding enzyme C-terminal domain LMD38_RS21645 PF00501 AMP-binding enzyme LMD38_RS21650 PF04055 Radical SAM superfamily LMD38_RS21660 PF02245 Methylpurine-DNA glycosylase (MPG) LMD38_RS21665 PF03306 Alpha-acetolactate decarboxylase LMD38_RS21670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMD38_RS21670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMD38_RS21670 PF00205 Thiamine pyrophosphate enzyme, central domain LMD38_RS21685 PF06133 Control of competence regulator ComK, YlbF/YmcA LMD38_RS21690 PF04286 Protein of unknown function (DUF445) LMD38_RS21700 PF14398 YheC/D like ATP-grasp LMD38_RS21710 PF00269 Small, acid-soluble spore proteins, alpha/beta type LMD38_RS21715 PF00005 ABC transporter LMD38_RS21720 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS21725 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMD38_RS21730 PF00664 ABC transporter transmembrane region LMD38_RS21730 PF00005 ABC transporter LMD38_RS21735 PF00005 ABC transporter LMD38_RS21735 PF00664 ABC transporter transmembrane region LMD38_RS21740 PF00171 Aldehyde dehydrogenase family LMD38_RS21745 PF01177 Asp/Glu/Hydantoin racemase LMD38_RS21750 PF13520 Amino acid permease LMD38_RS21760 PF01965 DJ-1/PfpI family LMD38_RS21770 PF07690 Major Facilitator Superfamily LMD38_RS21775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS21775 PF12793 Sugar transport-related sRNA regulator N-term LMD38_RS21780 PF02525 Flavodoxin-like fold LMD38_RS21790 PF01638 HxlR-like helix-turn-helix LMD38_RS21795 PF07690 Major Facilitator Superfamily LMD38_RS21800 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS21800 PF17934 Tetracyclin repressor-like, C-terminal domain LMD38_RS21805 PF00893 Small Multidrug Resistance protein LMD38_RS21810 PF00893 Small Multidrug Resistance protein LMD38_RS21825 PF01037 Lrp/AsnC ligand binding domain LMD38_RS21830 PF00892 EamA-like transporter family LMD38_RS21845 PF07681 DoxX LMD38_RS21855 PF00367 phosphotransferase system, EIIB LMD38_RS21855 PF02378 Phosphotransferase system, EIIC LMD38_RS21860 PF01380 SIS domain LMD38_RS21865 PF01418 Helix-turn-helix domain, rpiR family LMD38_RS21865 PF01380 SIS domain LMD38_RS21875 PF00999 Sodium/hydrogen exchanger family LMD38_RS21880 PF13520 Amino acid permease LMD38_RS21915 PF09335 SNARE associated Golgi protein LMD38_RS21925 PF02735 Ku70/Ku80 beta-barrel domain LMD38_RS21940 PF11007 Spore coat associated protein JA (CotJA) LMD38_RS21945 PF12652 CotJB protein LMD38_RS21950 PF05067 Manganese containing catalase LMD38_RS21955 PF05525 Branched-chain amino acid transport protein LMD38_RS21970 PF09529 Integral membrane protein (intg_mem_TP0381) LMD38_RS21980 PF00005 ABC transporter LMD38_RS21985 PF12704 MacB-like periplasmic core domain LMD38_RS21985 PF02687 FtsX-like permease family LMD38_RS21990 PF06725 3D domain LMD38_RS21990 PF01476 LysM domain LMD38_RS22005 PF02378 Phosphotransferase system, EIIC LMD38_RS22010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LMD38_RS22015 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LMD38_RS22020 PF05043 Mga helix-turn-helix domain LMD38_RS22020 PF08279 HTH domain LMD38_RS22020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LMD38_RS22020 PF00874 PRD domain LMD38_RS22030 PF07690 Major Facilitator Superfamily LMD38_RS22035 PF02690 Na+/Pi-cotransporter LMD38_RS22040 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS22040 PF00107 Zinc-binding dehydrogenase LMD38_RS22045 PF03816 Cell envelope-related transcriptional attenuator domain LMD38_RS22055 PF01925 Sulfite exporter TauE/SafE LMD38_RS22060 PF13686 DsrE/DsrF/DrsH-like family LMD38_RS22065 PF00581 Rhodanese-like domain LMD38_RS22065 PF01206 Sulfurtransferase TusA LMD38_RS22070 PF00581 Rhodanese-like domain LMD38_RS22075 PF01206 Sulfurtransferase TusA LMD38_RS22080 PF00753 Metallo-beta-lactamase superfamily LMD38_RS22080 PF00581 Rhodanese-like domain LMD38_RS22085 PF00581 Rhodanese-like domain LMD38_RS22085 PF01206 Sulfurtransferase TusA LMD38_RS22090 PF02583 Metal-sensitive transcriptional repressor LMD38_RS22115 PF00089 Trypsin LMD38_RS22130 PF04293 SpoVR like protein LMD38_RS22135 PF00881 Nitroreductase family LMD38_RS22155 PF03845 Spore germination protein LMD38_RS22165 PF14148 YhdB-like protein LMD38_RS22170 PF02600 Disulfide bond formation protein DsbB LMD38_RS22175 PF00085 Thioredoxin LMD38_RS22190 PF17969 L,D-transpeptidase C-terminal domain LMD38_RS22190 PF03734 L,D-transpeptidase catalytic domain LMD38_RS22200 PF00860 Permease family LMD38_RS22215 PF01047 MarR family LMD38_RS22220 PF07690 Major Facilitator Superfamily LMD38_RS22225 PF02702 Osmosensitive K+ channel His kinase sensor domain LMD38_RS22230 PF02669 K+-transporting ATPase, c chain LMD38_RS22240 PF03814 Potassium-transporting ATPase A subunit LMD38_RS22265 PF08543 Phosphomethylpyrimidine kinase LMD38_RS22270 PF00899 ThiF family LMD38_RS22275 PF05690 Thiazole biosynthesis protein ThiG LMD38_RS22280 PF02597 ThiS family LMD38_RS22285 PF01266 FAD dependent oxidoreductase LMD38_RS22290 PF02581 Thiamine monophosphate synthase LMD38_RS22295 PF09084 NMT1/THI5 like LMD38_RS22300 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS22305 PF00005 ABC transporter LMD38_RS22310 PF03070 TENA/THI-4/PQQC family LMD38_RS22315 PF00246 Zinc carboxypeptidase LMD38_RS22315 PF08239 Bacterial SH3 domain LMD38_RS22330 PF00571 CBS domain LMD38_RS22450 PF00873 AcrB/AcrD/AcrF family LMD38_RS22465 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS22470 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS22475 PF12849 PBP superfamily domain LMD38_RS22480 PF02421 Ferrous iron transport protein B LMD38_RS22480 PF17910 FeoB cytosolic helical domain LMD38_RS22480 PF07670 Nucleoside recognition LMD38_RS22480 PF07664 Ferrous iron transport protein B C terminus LMD38_RS22480 PF04023 FeoA domain LMD38_RS22485 PF07670 Nucleoside recognition LMD38_RS22485 PF07664 Ferrous iron transport protein B C terminus LMD38_RS22485 PF17910 FeoB cytosolic helical domain LMD38_RS22485 PF02421 Ferrous iron transport protein B LMD38_RS22490 PF07670 Nucleoside recognition LMD38_RS22490 PF02421 Ferrous iron transport protein B LMD38_RS22490 PF17910 FeoB cytosolic helical domain LMD38_RS22490 PF07664 Ferrous iron transport protein B C terminus LMD38_RS22500 PF05504 Spore germination B3/ GerAC like, C-terminal LMD38_RS22505 PF03845 Spore germination protein LMD38_RS22510 PF03323 Bacillus/Clostridium GerA spore germination protein LMD38_RS22515 PF00474 Sodium:solute symporter family LMD38_RS22520 PF11755 Protein of unknown function (DUF3311) LMD38_RS22525 PF07687 Peptidase dimerisation domain LMD38_RS22525 PF01546 Peptidase family M20/M25/M40 LMD38_RS22530 PF13529 Peptidase_C39 like family LMD38_RS22535 PF00324 Amino acid permease LMD38_RS22540 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LMD38_RS22545 PF00115 Cytochrome C and Quinol oxidase polypeptide I LMD38_RS22550 PF00510 Cytochrome c oxidase subunit III LMD38_RS22560 PF00999 Sodium/hydrogen exchanger family LMD38_RS22560 PF02080 TrkA-C domain LMD38_RS22560 PF02254 TrkA-N domain LMD38_RS22570 PF13673 Acetyltransferase (GNAT) domain LMD38_RS22585 PF00860 Permease family LMD38_RS22590 PF00324 Amino acid permease LMD38_RS22605 PF05525 Branched-chain amino acid transport protein LMD38_RS22610 PF00854 POT family LMD38_RS22620 PF04203 Sortase domain LMD38_RS22630 PF01381 Helix-turn-helix LMD38_RS22635 PF01476 LysM domain LMD38_RS22635 PF06725 3D domain LMD38_RS22640 PF00672 HAMP domain LMD38_RS22640 PF02743 Cache domain LMD38_RS22640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS22645 PF02673 Bacitracin resistance protein BacA LMD38_RS22670 PF03372 Endonuclease/Exonuclease/phosphatase family LMD38_RS22675 PF00882 Zinc dependent phospholipase C LMD38_RS22685 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS22685 PF00107 Zinc-binding dehydrogenase LMD38_RS22700 PF05547 Immune inhibitor A peptidase M6 LMD38_RS22705 PF00923 Transaldolase/Fructose-6-phosphate aldolase LMD38_RS22710 PF13407 Periplasmic binding protein domain LMD38_RS22715 PF02653 Branched-chain amino acid transport system / permease component LMD38_RS22725 PF01609 Transposase DDE domain LMD38_RS22735 PF05025 RbsD / FucU transport protein family LMD38_RS22740 PF00294 pfkB family carbohydrate kinase LMD38_RS22745 PF00356 Bacterial regulatory proteins, lacI family LMD38_RS22750 PF07690 Major Facilitator Superfamily LMD38_RS22755 PF01047 MarR family LMD38_RS22760 PF07690 Major Facilitator Superfamily LMD38_RS22765 PF00005 ABC transporter LMD38_RS22765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMD38_RS22770 PF00005 ABC transporter LMD38_RS22770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMD38_RS22775 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS22780 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS22785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS22795 PF00582 Universal stress protein family LMD38_RS22800 PF00916 Sulfate permease family LMD38_RS22800 PF01740 STAS domain LMD38_RS22810 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS22810 PF00072 Response regulator receiver domain LMD38_RS22815 PF00989 PAS fold LMD38_RS22815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS22815 PF00672 HAMP domain LMD38_RS22815 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS22815 PF18698 Histidine kinase sensor domain LMD38_RS22820 PF01872 RibD C-terminal domain LMD38_RS22825 PF13280 WYL domain LMD38_RS22825 PF08279 HTH domain LMD38_RS22850 PF00324 Amino acid permease LMD38_RS22855 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS22860 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS22865 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMD38_RS22870 PF00005 ABC transporter LMD38_RS22875 PF01235 Sodium:alanine symporter family LMD38_RS22880 PF01636 Phosphotransferase enzyme family LMD38_RS22890 PF03323 Bacillus/Clostridium GerA spore germination protein LMD38_RS22905 PF16657 Maltogenic Amylase, C-terminal domain LMD38_RS22905 PF00128 Alpha amylase, catalytic domain LMD38_RS22910 PF00367 phosphotransferase system, EIIB LMD38_RS22910 PF02378 Phosphotransferase system, EIIC LMD38_RS22915 PF07702 UTRA domain LMD38_RS22915 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS22920 PF13520 Amino acid permease LMD38_RS22925 PF03707 Bacterial signalling protein N terminal repeat LMD38_RS22925 PF00990 Diguanylate cyclase, GGDEF domain LMD38_RS22925 PF00563 EAL domain LMD38_RS22940 PF13091 PLD-like domain LMD38_RS22940 PF13396 Phospholipase_D-nuclease N-terminal LMD38_RS22945 PF07728 AAA domain (dynein-related subfamily) LMD38_RS22950 PF00092 von Willebrand factor type A domain LMD38_RS22960 PF00293 NUDIX domain LMD38_RS22960 PF13344 Haloacid dehalogenase-like hydrolase LMD38_RS22965 PF00156 Phosphoribosyl transferase domain LMD38_RS22970 PF01370 NAD dependent epimerase/dehydratase family LMD38_RS22975 PF00155 Aminotransferase class I and II LMD38_RS22980 PF08241 Methyltransferase domain LMD38_RS22985 PF00005 ABC transporter LMD38_RS22990 PF01032 FecCD transport family LMD38_RS22995 PF01032 FecCD transport family LMD38_RS23000 PF01497 Periplasmic binding protein LMD38_RS23005 PF00854 POT family LMD38_RS23010 PF08141 Small acid-soluble spore protein H family LMD38_RS23015 PF01022 Bacterial regulatory protein, arsR family LMD38_RS23020 PF02652 L-lactate permease LMD38_RS23025 PF11337 Protein of unknown function (DUF3139) LMD38_RS23030 PF00206 Lyase LMD38_RS23030 PF10415 Fumarase C C-terminus LMD38_RS23035 PF03471 Transporter associated domain LMD38_RS23035 PF01595 Cyclin M transmembrane N-terminal domain LMD38_RS23035 PF00571 CBS domain LMD38_RS23040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS23045 PF01773 Na+ dependent nucleoside transporter N-terminus LMD38_RS23045 PF07662 Na+ dependent nucleoside transporter C-terminus LMD38_RS23050 PF03816 Cell envelope-related transcriptional attenuator domain LMD38_RS23055 PF04294 VanW like protein LMD38_RS23075 PF03413 Peptidase propeptide and YPEB domain LMD38_RS23075 PF07504 Fungalysin/Thermolysin Propeptide Motif LMD38_RS23075 PF01447 Thermolysin metallopeptidase, catalytic domain LMD38_RS23075 PF02868 Thermolysin metallopeptidase, alpha-helical domain LMD38_RS23090 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LMD38_RS23090 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LMD38_RS23090 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LMD38_RS23095 PF00403 Heavy-metal-associated domain LMD38_RS23100 PF01022 Bacterial regulatory protein, arsR family LMD38_RS23105 PF13520 Amino acid permease LMD38_RS23110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LMD38_RS23110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LMD38_RS23120 PF07849 Protein of unknown function (DUF1641) LMD38_RS23125 PF00384 Molybdopterin oxidoreductase LMD38_RS23125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LMD38_RS23125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LMD38_RS23125 PF00037 4Fe-4S binding domain LMD38_RS23125 PF01568 Molydopterin dinucleotide binding domain LMD38_RS23135 PF02634 FdhD/NarQ family LMD38_RS23140 PF13508 Acetyltransferase (GNAT) domain LMD38_RS23140 PF00583 Acetyltransferase (GNAT) family LMD38_RS23145 PF00072 Response regulator receiver domain LMD38_RS23145 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS23150 PF00672 HAMP domain LMD38_RS23150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS23150 PF18698 Histidine kinase sensor domain LMD38_RS23150 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS23150 PF00989 PAS fold LMD38_RS23160 PF00155 Aminotransferase class I and II LMD38_RS23160 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS23165 PF00892 EamA-like transporter family LMD38_RS23175 PF13529 Peptidase_C39 like family LMD38_RS23190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS23190 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS23195 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS23195 PF00072 Response regulator receiver domain LMD38_RS23200 PF00149 Calcineurin-like phosphoesterase LMD38_RS23205 PF13416 Bacterial extracellular solute-binding protein LMD38_RS23210 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS23215 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS23220 PF00005 ABC transporter LMD38_RS23220 PF17912 MalK OB fold domain LMD38_RS23225 PF04309 Glycerol-3-phosphate responsive antiterminator LMD38_RS23250 PF03600 Citrate transporter LMD38_RS23255 PF12431 Transcriptional regulator LMD38_RS23255 PF00072 Response regulator receiver domain LMD38_RS23260 PF17203 Single cache domain 3 LMD38_RS23260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS23260 PF00989 PAS fold LMD38_RS23260 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LMD38_RS23265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS23265 PF02743 Cache domain LMD38_RS23265 PF00672 HAMP domain LMD38_RS23270 PF15975 Flotillin LMD38_RS23270 PF01145 SPFH domain / Band 7 family LMD38_RS23280 PF01752 Collagenase LMD38_RS23280 PF08453 Peptidase family M9 N-terminal LMD38_RS23280 PF18496 Collagenase G catalytic helper subdomain LMD38_RS23285 PF02028 BCCT, betaine/carnitine/choline family transporter LMD38_RS23290 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS23295 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS23300 PF00005 ABC transporter LMD38_RS23305 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMD38_RS23320 PF04285 Protein of unknown function (DUF444) LMD38_RS23325 PF08298 PrkA AAA domain LMD38_RS23325 PF06798 PrkA serine protein kinase C-terminal domain LMD38_RS23330 PF03707 Bacterial signalling protein N terminal repeat LMD38_RS23330 PF00990 Diguanylate cyclase, GGDEF domain LMD38_RS23330 PF00563 EAL domain LMD38_RS23335 PF00588 SpoU rRNA Methylase family LMD38_RS23340 PF12671 Putative amidase domain LMD38_RS23345 PF08331 Domain of unknown function (DUF1730) LMD38_RS23355 PF13462 Thioredoxin LMD38_RS23360 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS23360 PF00912 Transglycosylase LMD38_RS23365 PF13344 Haloacid dehalogenase-like hydrolase LMD38_RS23365 PF00293 NUDIX domain LMD38_RS23370 PF01709 Transcriptional regulator LMD38_RS23465 PF11023 Zinc-ribbon containing domain LMD38_RS23470 PF01475 Ferric uptake regulator family LMD38_RS23475 PF00578 AhpC/TSA family LMD38_RS23480 PF07885 Ion channel LMD38_RS23495 PF00005 ABC transporter LMD38_RS23500 PF00202 Aminotransferase class-III LMD38_RS23505 PF01493 GXGXG motif LMD38_RS23505 PF01645 Conserved region in glutamate synthase LMD38_RS23505 PF00310 Glutamine amidotransferases class-II LMD38_RS23505 PF04898 Glutamate synthase central domain LMD38_RS23510 PF06081 Aromatic acid exporter family member 1 LMD38_RS23515 PF00664 ABC transporter transmembrane region LMD38_RS23515 PF00005 ABC transporter LMD38_RS23520 PF04167 Protein of unknown function (DUF402) LMD38_RS23525 PF14182 YgaB-like protein LMD38_RS23530 PF04259 Small, acid-soluble spore protein, gamma-type LMD38_RS23540 PF14815 NUDIX domain LMD38_RS23540 PF00730 HhH-GPD superfamily base excision DNA repair protein LMD38_RS23545 PF04307 LexA-binding, inner membrane-associated putative hydrolase LMD38_RS23550 PF14043 WVELL protein LMD38_RS23555 PF08176 Small acid-soluble spore protein K family LMD38_RS23570 PF02631 RecX family LMD38_RS23575 PF08338 Domain of unknown function (DUF1731) LMD38_RS23575 PF01370 NAD dependent epimerase/dehydratase family LMD38_RS23580 PF01979 Amidohydrolase family LMD38_RS23595 PF04101 Glycosyltransferase family 28 C-terminal domain LMD38_RS23595 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LMD38_RS23600 PF04055 Radical SAM superfamily LMD38_RS23605 PF01228 Glycine radical LMD38_RS23605 PF02901 Pyruvate formate lyase-like LMD38_RS23610 PF00535 Glycosyl transferase family 2 LMD38_RS23615 PF02911 Formyl transferase, C-terminal domain LMD38_RS23615 PF01370 NAD dependent epimerase/dehydratase family LMD38_RS23615 PF00551 Formyl transferase LMD38_RS23620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LMD38_RS23620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LMD38_RS23620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LMD38_RS23625 PF00535 Glycosyl transferase family 2 LMD38_RS23640 PF00144 Beta-lactamase LMD38_RS23645 PF00367 phosphotransferase system, EIIB LMD38_RS23645 PF02378 Phosphotransferase system, EIIC LMD38_RS23650 PF04960 Glutaminase LMD38_RS23675 PF01546 Peptidase family M20/M25/M40 LMD38_RS23675 PF07687 Peptidase dimerisation domain LMD38_RS23680 PF00324 Amino acid permease LMD38_RS23690 PF02954 Bacterial regulatory protein, Fis family LMD38_RS23690 PF13426 PAS domain LMD38_RS23690 PF00158 Sigma-54 interaction domain LMD38_RS23700 PF01416 tRNA pseudouridine synthase LMD38_RS23705 PF01938 TRAM domain LMD38_RS23705 PF05958 tRNA (Uracil-5-)-methyltransferase LMD38_RS23710 PF00730 HhH-GPD superfamily base excision DNA repair protein LMD38_RS23715 PF01522 Polysaccharide deacetylase LMD38_RS23720 PF05681 Fumarate hydratase (Fumerase) LMD38_RS23720 PF05683 Fumarase C-terminus LMD38_RS23730 PF08756 YfkB-like domain LMD38_RS23730 PF04055 Radical SAM superfamily LMD38_RS23735 PF14167 YfkD-like protein LMD38_RS23740 PF01699 Sodium/calcium exchanger protein LMD38_RS23745 PF16242 Pyridoxamine 5'-phosphate oxidase like LMD38_RS23760 PF09335 SNARE associated Golgi protein LMD38_RS23770 PF10502 Signal peptidase, peptidase S26 LMD38_RS23785 PF00892 EamA-like transporter family LMD38_RS23795 PF03631 Virulence factor BrkB LMD38_RS23805 PF01451 Low molecular weight phosphotyrosine protein phosphatase LMD38_RS23810 PF06569 Protein of unknown function (DUF1128) LMD38_RS23815 PF00689 Cation transporting ATPase, C-terminus LMD38_RS23815 PF00690 Cation transporter/ATPase, N-terminus LMD38_RS23820 PF05816 Toxic anion resistance protein (TelA) LMD38_RS23825 PF14266 Putative component of 'biosynthetic module' LMD38_RS23830 PF03741 Integral membrane protein TerC family LMD38_RS23835 PF02342 TerD domain LMD38_RS23840 PF02342 TerD domain LMD38_RS23845 PF02342 TerD domain LMD38_RS23850 PF00480 ROK family LMD38_RS23860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMD38_RS23860 PF09180 Prolyl-tRNA synthetase, C-terminal LMD38_RS23860 PF03129 Anticodon binding domain LMD38_RS23875 PF11700 Vacuole effluxer Atg22 like LMD38_RS23895 PF08360 QacR-like protein, C-terminal region LMD38_RS23895 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS23915 PF01385 Probable transposase LMD38_RS23915 PF12323 Helix-turn-helix domain LMD38_RS23915 PF07282 Putative transposase DNA-binding domain LMD38_RS23925 PF00041 Fibronectin type III domain LMD38_RS23925 PF00704 Glycosyl hydrolases family 18 LMD38_RS23930 PF00005 ABC transporter LMD38_RS23930 PF12848 ABC transporter LMD38_RS23940 PF00005 ABC transporter LMD38_RS23950 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS23955 PF01910 Thiamine-binding protein LMD38_RS23960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS23960 PF00672 HAMP domain LMD38_RS23965 PF03605 Anaerobic c4-dicarboxylate membrane transporter LMD38_RS23970 PF02581 Thiamine monophosphate synthase LMD38_RS23975 PF02110 Hydroxyethylthiazole kinase family LMD38_RS23980 PF01751 Toprim domain LMD38_RS23980 PF01131 DNA topoisomerase LMD38_RS23985 PF01061 ABC-2 type transporter LMD38_RS23990 PF03372 Endonuclease/Exonuclease/phosphatase family LMD38_RS23995 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LMD38_RS23995 PF00367 phosphotransferase system, EIIB LMD38_RS23995 PF02378 Phosphotransferase system, EIIC LMD38_RS24000 PF00128 Alpha amylase, catalytic domain LMD38_RS24000 PF16657 Maltogenic Amylase, C-terminal domain LMD38_RS24005 PF08031 Berberine and berberine like LMD38_RS24005 PF01565 FAD binding domain LMD38_RS24010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS24010 PF12729 Four helix bundle sensory module for signal transduction LMD38_RS24010 PF00672 HAMP domain LMD38_RS24015 PF12729 Four helix bundle sensory module for signal transduction LMD38_RS24015 PF00672 HAMP domain LMD38_RS24015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS24020 PF00005 ABC transporter LMD38_RS24025 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMD38_RS24030 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS24035 PF00072 Response regulator receiver domain LMD38_RS24045 PF00535 Glycosyl transferase family 2 LMD38_RS24055 PF00355 Rieske [2Fe-2S] domain LMD38_RS24055 PF01266 FAD dependent oxidoreductase LMD38_RS24060 PF07690 Major Facilitator Superfamily LMD38_RS24065 PF10127 RNA repair pathway DNA polymerase beta family LMD38_RS24105 PF12728 Helix-turn-helix domain LMD38_RS24115 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS24120 PF01497 Periplasmic binding protein LMD38_RS24125 PF01032 FecCD transport family LMD38_RS24130 PF01032 FecCD transport family LMD38_RS24150 PF00596 Class II Aldolase and Adducin N-terminal domain LMD38_RS24165 PF01636 Phosphotransferase enzyme family LMD38_RS24170 PF00578 AhpC/TSA family LMD38_RS24175 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMD38_RS24175 PF13192 Thioredoxin domain LMD38_RS24190 PF07687 Peptidase dimerisation domain LMD38_RS24190 PF01546 Peptidase family M20/M25/M40 LMD38_RS24195 PF03553 Na+/H+ antiporter family LMD38_RS24205 PF13378 Enolase C-terminal domain-like LMD38_RS24205 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LMD38_RS24215 PF00145 C-5 cytosine-specific DNA methylase LMD38_RS24230 PF07308 Protein of unknown function (DUF1456) LMD38_RS24235 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS24235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS24235 PF00989 PAS fold LMD38_RS24235 PF13188 PAS domain LMD38_RS24235 PF13426 PAS domain LMD38_RS24240 PF01207 Dihydrouridine synthase (Dus) LMD38_RS24245 PF05958 tRNA (Uracil-5-)-methyltransferase LMD38_RS24245 PF01938 TRAM domain LMD38_RS24245 PF02475 Met-10+ like-protein LMD38_RS24250 PF01773 Na+ dependent nucleoside transporter N-terminus LMD38_RS24250 PF07662 Na+ dependent nucleoside transporter C-terminus LMD38_RS24250 PF07670 Nucleoside recognition LMD38_RS24260 PF02073 Thermophilic metalloprotease (M29) LMD38_RS24265 PF00893 Small Multidrug Resistance protein LMD38_RS24270 PF00171 Aldehyde dehydrogenase family LMD38_RS24275 PF00158 Sigma-54 interaction domain LMD38_RS24280 PF00202 Aminotransferase class-III LMD38_RS24285 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS24290 PF00781 Diacylglycerol kinase catalytic domain LMD38_RS24295 PF02934 GatB/GatE catalytic domain LMD38_RS24295 PF02637 GatB domain LMD38_RS24300 PF01425 Amidase LMD38_RS24305 PF02686 Glu-tRNAGln amidotransferase C subunit LMD38_RS24310 PF05360 yiaA/B two helix domain LMD38_RS24315 PF01047 MarR family LMD38_RS24320 PF02374 Anion-transporting ATPase LMD38_RS24320 PF17886 HSP20-like domain found in ArsA LMD38_RS24335 PF03180 NLPA lipoprotein LMD38_RS24340 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS24345 PF09383 NIL domain LMD38_RS24345 PF00005 ABC transporter LMD38_RS24350 PF00857 Isochorismatase family LMD38_RS24360 PF00171 Aldehyde dehydrogenase family LMD38_RS24365 PF01925 Sulfite exporter TauE/SafE LMD38_RS24370 PF07537 CamS sex pheromone cAM373 precursor LMD38_RS24375 PF12826 Helix-hairpin-helix motif LMD38_RS24375 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LMD38_RS24375 PF03120 NAD-dependent DNA ligase OB-fold domain LMD38_RS24375 PF01653 NAD-dependent DNA ligase adenylation domain LMD38_RS24375 PF00533 BRCA1 C Terminus (BRCT) domain LMD38_RS24380 PF13361 UvrD-like helicase C-terminal domain LMD38_RS24380 PF00580 UvrD/REP helicase N-terminal domain LMD38_RS24385 PF01884 PcrB family LMD38_RS24405 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LMD38_RS24405 PF02843 Phosphoribosylglycinamide synthetase, C domain LMD38_RS24405 PF02844 Phosphoribosylglycinamide synthetase, N domain LMD38_RS24410 PF01808 AICARFT/IMPCHase bienzyme LMD38_RS24410 PF02142 MGS-like domain LMD38_RS24415 PF00551 Formyl transferase LMD38_RS24420 PF02769 AIR synthase related protein, C-terminal domain LMD38_RS24420 PF00586 AIR synthase related protein, N-terminal domain LMD38_RS24425 PF00156 Phosphoribosyl transferase domain LMD38_RS24430 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LMD38_RS24430 PF02769 AIR synthase related protein, C-terminal domain LMD38_RS24430 PF00586 AIR synthase related protein, N-terminal domain LMD38_RS24440 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LMD38_RS24445 PF01259 SAICAR synthetase LMD38_RS24450 PF10397 Adenylosuccinate lyase C-terminus LMD38_RS24450 PF00206 Lyase LMD38_RS24455 PF02222 ATP-grasp domain LMD38_RS24455 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LMD38_RS24460 PF00731 AIR carboxylase LMD38_RS24485 PF00892 EamA-like transporter family LMD38_RS24515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS24515 PF03466 LysR substrate binding domain LMD38_RS24520 PF01177 Asp/Glu/Hydantoin racemase LMD38_RS24540 PF00535 Glycosyl transferase family 2 LMD38_RS24560 PF08241 Methyltransferase domain LMD38_RS24570 PF14307 Glycosyltransferase WbsX LMD38_RS24570 PF05045 Rhamnan synthesis protein F LMD38_RS24590 PF01323 DSBA-like thioredoxin domain LMD38_RS24615 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS24615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS24615 PF16736 Single Cache-like LMD38_RS24615 PF00989 PAS fold LMD38_RS24620 PF00072 Response regulator receiver domain LMD38_RS24620 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS24625 PF00860 Permease family LMD38_RS24630 PF00958 GMP synthase C terminal domain LMD38_RS24630 PF00117 Glutamine amidotransferase class-I LMD38_RS24630 PF02540 NAD synthase LMD38_RS24635 PF00118 TCP-1/cpn60 chaperonin family LMD38_RS24640 PF00166 Chaperonin 10 Kd subunit LMD38_RS24645 PF02517 CPBP intramembrane metalloprotease LMD38_RS24655 PF06971 Putative DNA-binding protein N-terminus LMD38_RS24655 PF02629 CoA binding domain LMD38_RS24660 PF12848 ABC transporter LMD38_RS24660 PF16326 ABC transporter C-terminal domain LMD38_RS24660 PF00005 ABC transporter LMD38_RS24665 PF00814 Glycoprotease family LMD38_RS24670 PF00583 Acetyltransferase (GNAT) family LMD38_RS24675 PF00814 Glycoprotease family LMD38_RS24680 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LMD38_RS24765 PF17283 SprT-like zinc ribbon domain LMD38_RS24765 PF10263 SprT-like family LMD38_RS24775 PF00575 S1 RNA binding domain LMD38_RS24775 PF09371 Tex-like protein N-terminal domain LMD38_RS24775 PF16921 Tex protein YqgF-like domain LMD38_RS24775 PF17674 HHH domain LMD38_RS24780 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LMD38_RS24785 PF01402 Ribbon-helix-helix protein, copG family LMD38_RS24790 PF00842 Alanine racemase, C-terminal domain LMD38_RS24790 PF01168 Alanine racemase, N-terminal domain LMD38_RS24800 PF01648 4'-phosphopantetheinyl transferase superfamily LMD38_RS24805 PF01694 Rhomboid family LMD38_RS24810 PF03851 UV-endonuclease UvdE LMD38_RS24815 PF00271 Helicase conserved C-terminal domain LMD38_RS24815 PF00270 DEAD/DEAH box helicase LMD38_RS24820 PF08245 Mur ligase middle domain LMD38_RS24820 PF01225 Mur ligase family, catalytic domain LMD38_RS24820 PF02875 Mur ligase family, glutamate ligase domain LMD38_RS24825 PF01820 D-ala D-ala ligase N-terminus LMD38_RS24825 PF07478 D-ala D-ala ligase C-terminus LMD38_RS24830 PF07690 Major Facilitator Superfamily LMD38_RS24835 PF13520 Amino acid permease LMD38_RS24845 PF01557 Fumarylacetoacetate (FAA) hydrolase family LMD38_RS24850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMD38_RS24885 PF00005 ABC transporter LMD38_RS24885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMD38_RS24890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMD38_RS24890 PF00005 ABC transporter LMD38_RS24895 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS24895 PF12911 N-terminal TM domain of oligopeptide transport permease C LMD38_RS24900 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS24905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS24910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS24920 PF12848 ABC transporter LMD38_RS24920 PF16326 ABC transporter C-terminal domain LMD38_RS24920 PF00005 ABC transporter LMD38_RS24945 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) LMD38_RS24955 PF01026 TatD related DNase LMD38_RS24965 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMD38_RS24965 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LMD38_RS24975 PF00356 Bacterial regulatory proteins, lacI family LMD38_RS24975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LMD38_RS24985 PF01553 Acyltransferase LMD38_RS24995 PF14142 YrzO-like protein LMD38_RS25000 PF00892 EamA-like transporter family LMD38_RS25005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS25005 PF03466 LysR substrate binding domain LMD38_RS25015 PF12728 Helix-turn-helix domain LMD38_RS25015 PF12727 PBP superfamily domain LMD38_RS25025 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS25030 PF06800 Sugar transport protein LMD38_RS25035 PF04973 Nicotinamide mononucleotide transporter LMD38_RS25040 PF03807 NADP oxidoreductase coenzyme F420-dependent LMD38_RS25040 PF14748 Pyrroline-5-carboxylate reductase dimerisation LMD38_RS25045 PF00248 Aldo/keto reductase family LMD38_RS25050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS25055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS25065 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS25080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMD38_RS25085 PF00005 ABC transporter LMD38_RS25085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMD38_RS25090 PF00005 ABC transporter LMD38_RS25090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMD38_RS25095 PF12911 N-terminal TM domain of oligopeptide transport permease C LMD38_RS25095 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS25100 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS25115 PF07690 Major Facilitator Superfamily LMD38_RS25125 PF07690 Major Facilitator Superfamily LMD38_RS25130 PF01565 FAD binding domain LMD38_RS25140 PF00107 Zinc-binding dehydrogenase LMD38_RS25140 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS25145 PF03180 NLPA lipoprotein LMD38_RS25150 PF09383 NIL domain LMD38_RS25150 PF00005 ABC transporter LMD38_RS25155 PF00528 Binding-protein-dependent transport system inner membrane component LMD38_RS25220 PF15978 Tn7-like transposition protein D LMD38_RS25220 PF06527 TniQ LMD38_RS25225 PF13401 AAA domain LMD38_RS25225 PF11426 Tn7 transposition regulator TnsC LMD38_RS25230 PF00665 Integrase core domain LMD38_RS25240 PF01695 IstB-like ATP binding protein LMD38_RS25245 PF02796 Helix-turn-helix domain of resolvase LMD38_RS25245 PF00665 Integrase core domain LMD38_RS25265 PF00664 ABC transporter transmembrane region LMD38_RS25265 PF00005 ABC transporter LMD38_RS25265 PF03412 Peptidase C39 family LMD38_RS25290 PF01381 Helix-turn-helix LMD38_RS25295 PF13307 Helicase C-terminal domain LMD38_RS25305 PF01380 SIS domain LMD38_RS25315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LMD38_RS25315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LMD38_RS25315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LMD38_RS25315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LMD38_RS25320 PF07949 YbbR-like protein LMD38_RS25325 PF02457 DisA bacterial checkpoint controller nucleotide-binding LMD38_RS25330 PF00491 Arginase family LMD38_RS25335 PF02595 Glycerate kinase family LMD38_RS25405 PF01522 Polysaccharide deacetylase LMD38_RS25410 PF14089 KinB-signalling pathway activation in sporulation LMD38_RS25415 PF17898 Spore germination GerD central core domain LMD38_RS25420 PF10609 NUBPL iron-transfer P-loop NTPase LMD38_RS25425 PF01520 N-acetylmuramoyl-L-alanine amidase LMD38_RS25435 PF00380 Ribosomal protein S9/S16 LMD38_RS25440 PF00572 Ribosomal protein L13 LMD38_RS25445 PF01416 tRNA pseudouridine synthase LMD38_RS25450 PF02361 Cobalt transport protein LMD38_RS25455 PF00005 ABC transporter LMD38_RS25460 PF00005 ABC transporter LMD38_RS25465 PF01196 Ribosomal protein L17 LMD38_RS25470 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LMD38_RS25470 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LMD38_RS25470 PF01000 RNA polymerase Rpb3/RpoA insert domain LMD38_RS25475 PF00411 Ribosomal protein S11 LMD38_RS25480 PF00416 Ribosomal protein S13/S18 LMD38_RS25485 PF00444 Ribosomal protein L36 LMD38_RS25490 PF01176 Translation initiation factor 1A / IF-1 LMD38_RS25495 PF00557 Metallopeptidase family M24 LMD38_RS25500 PF05191 Adenylate kinase, active site lid LMD38_RS25505 PF00344 SecY translocase LMD38_RS25510 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LMD38_RS25515 PF00327 Ribosomal protein L30p/L7e LMD38_RS25520 PF00333 Ribosomal protein S5, N-terminal domain LMD38_RS25520 PF03719 Ribosomal protein S5, C-terminal domain LMD38_RS25525 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LMD38_RS25530 PF00347 Ribosomal protein L6 LMD38_RS25535 PF00410 Ribosomal protein S8 LMD38_RS25540 PF00253 Ribosomal protein S14p/S29e LMD38_RS25545 PF00673 ribosomal L5P family C-terminus LMD38_RS25545 PF00281 Ribosomal protein L5 LMD38_RS25550 PF00467 KOW motif LMD38_RS25550 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LMD38_RS25555 PF00238 Ribosomal protein L14p/L23e LMD38_RS25560 PF00366 Ribosomal protein S17 LMD38_RS25565 PF00831 Ribosomal L29 protein LMD38_RS25570 PF00252 Ribosomal protein L16p/L10e LMD38_RS25575 PF07650 KH domain LMD38_RS25575 PF00189 Ribosomal protein S3, C-terminal domain LMD38_RS25580 PF00237 Ribosomal protein L22p/L17e LMD38_RS25585 PF00203 Ribosomal protein S19 LMD38_RS25590 PF00181 Ribosomal Proteins L2, RNA binding domain LMD38_RS25590 PF03947 Ribosomal Proteins L2, C-terminal domain LMD38_RS25595 PF00276 Ribosomal protein L23 LMD38_RS25600 PF00573 Ribosomal protein L4/L1 family LMD38_RS25605 PF00297 Ribosomal protein L3 LMD38_RS25610 PF00338 Ribosomal protein S10p/S20e LMD38_RS25615 PF00009 Elongation factor Tu GTP binding domain LMD38_RS25615 PF03144 Elongation factor Tu domain 2 LMD38_RS25615 PF03143 Elongation factor Tu C-terminal domain LMD38_RS25620 PF03144 Elongation factor Tu domain 2 LMD38_RS25620 PF00009 Elongation factor Tu GTP binding domain LMD38_RS25620 PF03764 Elongation factor G, domain IV LMD38_RS25620 PF14492 Elongation Factor G, domain II LMD38_RS25620 PF00679 Elongation factor G C-terminus LMD38_RS25625 PF00177 Ribosomal protein S7p/S5e LMD38_RS25630 PF00164 Ribosomal protein S12/S23 LMD38_RS25635 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LMD38_RS25640 PF04997 RNA polymerase Rpb1, domain 1 LMD38_RS25640 PF04983 RNA polymerase Rpb1, domain 3 LMD38_RS25640 PF05000 RNA polymerase Rpb1, domain 4 LMD38_RS25640 PF04998 RNA polymerase Rpb1, domain 5 LMD38_RS25640 PF00623 RNA polymerase Rpb1, domain 2 LMD38_RS25645 PF00562 RNA polymerase Rpb2, domain 6 LMD38_RS25645 PF04565 RNA polymerase Rpb2, domain 3 LMD38_RS25645 PF04560 RNA polymerase Rpb2, domain 7 LMD38_RS25645 PF04561 RNA polymerase Rpb2, domain 2 LMD38_RS25645 PF04563 RNA polymerase beta subunit LMD38_RS25645 PF10385 RNA polymerase beta subunit external 1 domain LMD38_RS25650 PF05175 Methyltransferase small domain LMD38_RS25655 PF00542 Ribosomal protein L7/L12 C-terminal domain LMD38_RS25655 PF16320 Ribosomal protein L7/L12 dimerisation domain LMD38_RS25660 PF00466 Ribosomal protein L10 LMD38_RS25665 PF00687 Ribosomal protein L1p/L10e family LMD38_RS25670 PF00298 Ribosomal protein L11, RNA binding domain LMD38_RS25670 PF03946 Ribosomal protein L11, N-terminal domain LMD38_RS25675 PF00467 KOW motif LMD38_RS25675 PF02357 Transcription termination factor nusG LMD38_RS25680 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LMD38_RS25685 PF00471 Ribosomal protein L33 LMD38_RS25690 PF04542 Sigma-70 region 2 LMD38_RS25690 PF08281 Sigma-70, region 4 LMD38_RS25695 PF05991 YacP-like NYN domain LMD38_RS25700 PF00588 SpoU rRNA Methylase family LMD38_RS25700 PF08032 RNA 2'-O ribose methyltransferase substrate binding LMD38_RS25705 PF00636 Ribonuclease III domain LMD38_RS25710 PF01406 tRNA synthetases class I (C) catalytic domain LMD38_RS25710 PF09190 DALR domain LMD38_RS25715 PF00132 Bacterial transferase hexapeptide (six repeats) LMD38_RS25715 PF06426 Serine acetyltransferase, N-terminal LMD38_RS25720 PF00749 tRNA synthetases class I (E and Q), catalytic domain LMD38_RS25725 PF02542 YgbB family LMD38_RS25730 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LMD38_RS25740 PF02457 DisA bacterial checkpoint controller nucleotide-binding LMD38_RS25740 PF10635 DisA bacterial checkpoint controller linker region LMD38_RS25745 PF18073 Rubredoxin metal binding domain LMD38_RS25750 PF07724 AAA domain (Cdc48 subfamily) LMD38_RS25750 PF17871 AAA lid domain LMD38_RS25750 PF02861 Clp amino terminal domain, pathogenicity island component LMD38_RS25750 PF10431 C-terminal, D2-small domain, of ClpB protein LMD38_RS25750 PF00004 ATPase family associated with various cellular activities (AAA) LMD38_RS25755 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LMD38_RS25760 PF02151 UvrB/uvrC motif LMD38_RS25765 PF05848 CtsR N-terminal HTH domain LMD38_RS25765 PF17727 CtsR C-terminal dimerization domain LMD38_RS25845 PF00152 tRNA synthetases class II (D, K and N) LMD38_RS25845 PF01336 OB-fold nucleic acid binding domain LMD38_RS25850 PF01207 Dihydrouridine synthase (Dus) LMD38_RS25855 PF01381 Helix-turn-helix LMD38_RS25860 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LMD38_RS25865 PF02152 Dihydroneopterin aldolase LMD38_RS25870 PF00809 Pterin binding enzyme LMD38_RS25875 PF01063 Amino-transferase class IV LMD38_RS25880 PF00117 Glutamine amidotransferase class-I LMD38_RS25885 PF04715 Anthranilate synthase component I, N terminal region LMD38_RS25885 PF00425 chorismate binding enzyme LMD38_RS25890 PF00291 Pyridoxal-phosphate dependent enzyme LMD38_RS25895 PF01430 Hsp33 protein LMD38_RS25900 PF03309 Type III pantothenate kinase LMD38_RS25905 PF01434 Peptidase family M41 LMD38_RS25905 PF00004 ATPase family associated with various cellular activities (AAA) LMD38_RS25905 PF17862 AAA+ lid domain LMD38_RS25905 PF06480 FtsH Extracellular LMD38_RS25910 PF00156 Phosphoribosyl transferase domain LMD38_RS25915 PF01171 PP-loop family LMD38_RS25915 PF09179 TilS substrate binding domain LMD38_RS25915 PF11734 TilS substrate C-terminal domain LMD38_RS25920 PF07228 Stage II sporulation protein E (SpoIIE) LMD38_RS25935 PF00575 S1 RNA binding domain LMD38_RS25945 PF09578 Spore cortex protein YabQ (Spore_YabQ) LMD38_RS25950 PF07873 YabP family LMD38_RS25955 PF01479 S4 domain LMD38_RS25960 PF03819 MazG nucleotide pyrophosphohydrolase domain LMD38_RS25960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LMD38_RS25965 PF01943 Polysaccharide biosynthesis protein LMD38_RS25965 PF14667 Polysaccharide biosynthesis C-terminal domain LMD38_RS25970 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LMD38_RS25970 PF15714 Stage V sporulation protein T C-terminal, transcription factor LMD38_RS25975 PF02559 CarD-like/TRCF domain LMD38_RS25975 PF00270 DEAD/DEAH box helicase LMD38_RS25975 PF03461 TRCF domain LMD38_RS25975 PF17757 UvrB interaction domain LMD38_RS25975 PF00271 Helicase conserved C-terminal domain LMD38_RS25985 PF01195 Peptidyl-tRNA hydrolase LMD38_RS25990 PF14572 Phosphoribosyl synthetase-associated domain LMD38_RS25990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LMD38_RS25995 PF00483 Nucleotidyl transferase LMD38_RS25995 PF00132 Bacterial transferase hexapeptide (six repeats) LMD38_RS26000 PF04026 SpoVG LMD38_RS26005 PF01042 Endoribonuclease L-PSP LMD38_RS26010 PF00156 Phosphoribosyl transferase domain LMD38_RS26010 PF09182 Bacterial purine repressor, N-terminal LMD38_RS26015 PF08544 GHMP kinases C terminal LMD38_RS26015 PF00288 GHMP kinases N terminal domain LMD38_RS26020 PF00269 Small, acid-soluble spore proteins, alpha/beta type LMD38_RS26025 PF06257 Biofilm formation stimulator VEG LMD38_RS26030 PF05582 YabG peptidase U57 LMD38_RS26035 PF00398 Ribosomal RNA adenine dimethylase LMD38_RS26040 PF13331 Domain of unknown function (DUF4093) LMD38_RS26040 PF13662 Toprim domain LMD38_RS26045 PF01026 TatD related DNase LMD38_RS26050 PF08264 Anticodon-binding domain of tRNA LMD38_RS26050 PF09334 tRNA synthetases class I (M) LMD38_RS26050 PF01588 Putative tRNA binding domain LMD38_RS26055 PF18277 AbrB C-terminal domain LMD38_RS26055 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LMD38_RS26060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LMD38_RS26065 PF01541 GIY-YIG catalytic domain LMD38_RS26070 PF05175 Methyltransferase small domain LMD38_RS26075 PF06156 Initiation control protein YabA LMD38_RS26080 PF04468 PSP1 C-terminal conserved region LMD38_RS26085 PF09115 DNA polymerase III, delta subunit, C terminal LMD38_RS26090 PF02223 Thymidylate kinase LMD38_RS26095 PF01276 Orn/Lys/Arg decarboxylase, major domain LMD38_RS26095 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LMD38_RS26130 PF07441 SigmaK-factor processing regulatory protein BofA LMD38_RS26135 PF10704 Protein of unknown function (DUF2508) LMD38_RS26140 PF02132 RecR protein LMD38_RS26140 PF13662 Toprim domain LMD38_RS26145 PF02575 YbaB/EbfC DNA-binding family LMD38_RS26150 PF12169 DNA polymerase III subunits gamma and tau domain III LMD38_RS26160 PF14437 MafB19-like deaminase LMD38_RS26165 PF00857 Isochorismatase family LMD38_RS26170 PF01712 Deoxynucleoside kinase LMD38_RS26175 PF01712 Deoxynucleoside kinase LMD38_RS26190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMD38_RS26190 PF02403 Seryl-tRNA synthetase N-terminal domain LMD38_RS26195 PF01174 SNO glutamine amidotransferase family LMD38_RS26200 PF01680 SOR/SNZ family LMD38_RS26205 PF07943 Penicillin-binding protein 5, C-terminal domain LMD38_RS26205 PF00768 D-alanyl-D-alanine carboxypeptidase LMD38_RS26210 PF00478 IMP dehydrogenase / GMP reductase domain LMD38_RS26210 PF00571 CBS domain LMD38_RS26215 PF14175 YaaC-like Protein LMD38_RS26245 PF03989 DNA gyrase C-terminal domain, beta-propeller LMD38_RS26245 PF00521 DNA gyrase/topoisomerase IV, subunit A LMD38_RS26250 PF00204 DNA gyrase B LMD38_RS26250 PF00986 DNA gyrase B subunit, carboxyl terminus LMD38_RS26250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS26250 PF01751 Toprim domain LMD38_RS26255 PF02463 RecF/RecN/SMC N terminal domain LMD38_RS26265 PF00712 DNA polymerase III beta subunit, N-terminal domain LMD38_RS26265 PF02767 DNA polymerase III beta subunit, central domain LMD38_RS26265 PF02768 DNA polymerase III beta subunit, C-terminal domain LMD38_RS26270 PF00308 Bacterial dnaA protein LMD38_RS26270 PF08299 Bacterial dnaA protein helix-turn-helix LMD38_RS26270 PF11638 DnaA N-terminal domain LMD38_RS26275 PF00468 Ribosomal protein L34 LMD38_RS26280 PF00825 Ribonuclease P LMD38_RS26285 PF02096 60Kd inner membrane protein LMD38_RS26290 PF14804 Jag N-terminus LMD38_RS26290 PF01424 R3H domain LMD38_RS26295 PF01926 50S ribosome-binding GTPase LMD38_RS26295 PF12631 MnmE helical domain LMD38_RS26295 PF10396 GTP-binding protein TrmE N-terminus LMD38_RS26300 PF01134 Glucose inhibited division protein A LMD38_RS26300 PF13932 GidA associated domain LMD38_RS26305 PF02527 rRNA small subunit methyltransferase G LMD38_RS26310 PF02195 ParB-like nuclease domain LMD38_RS26310 PF17762 HTH domain found in ParB protein LMD38_RS26315 PF13614 AAA domain LMD38_RS26320 PF02195 ParB-like nuclease domain LMD38_RS26320 PF17762 HTH domain found in ParB protein LMD38_RS26325 PF06866 Protein of unknown function (DUF1256) LMD38_RS26330 PF00924 Mechanosensitive ion channel LMD38_RS26335 PF06107 Bacterial protein of unknown function (DUF951) LMD38_RS26340 PF01926 50S ribosome-binding GTPase LMD38_RS26340 PF06071 Protein of unknown function (DUF933) LMD38_RS26345 PF01250 Ribosomal protein S6 LMD38_RS26350 PF00436 Single-strand binding protein family LMD38_RS26355 PF01084 Ribosomal protein S18 LMD38_RS26360 PF09991 Predicted membrane protein (DUF2232) LMD38_RS26365 PF01368 DHH family LMD38_RS26365 PF02272 DHHA1 domain LMD38_RS26370 PF03948 Ribosomal protein L9, C-terminal domain LMD38_RS26370 PF01281 Ribosomal protein L9, N-terminal domain LMD38_RS26375 PF00772 DnaB-like helicase N terminal domain LMD38_RS26375 PF03796 DnaB-like helicase C terminal domain LMD38_RS26380 PF00709 Adenylosuccinate synthetase LMD38_RS26405 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS26405 PF00072 Response regulator receiver domain LMD38_RS26410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS26410 PF00672 HAMP domain LMD38_RS26410 PF13426 PAS domain LMD38_RS26410 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS26415 PF07435 YycH protein LMD38_RS26420 PF09648 YycH protein LMD38_RS26425 PF00753 Metallo-beta-lactamase superfamily LMD38_RS26430 PF13180 PDZ domain LMD38_RS26440 PF02590 Predicted SPOUT methyltransferase LMD38_RS26450 PF13614 AAA domain LMD38_RS26470 PF01381 Helix-turn-helix LMD38_RS26485 PF07508 Recombinase LMD38_RS26485 PF00239 Resolvase, N terminal domain LMD38_RS26520 PF01432 Peptidase family M3 LMD38_RS26520 PF08439 Oligopeptidase F LMD38_RS26525 PF00478 IMP dehydrogenase / GMP reductase domain LMD38_RS26530 PF03880 DbpA RNA binding domain LMD38_RS26530 PF00270 DEAD/DEAH box helicase LMD38_RS26530 PF00271 Helicase conserved C-terminal domain LMD38_RS26540 PF03006 Haemolysin-III related LMD38_RS26545 PF01695 IstB-like ATP binding protein LMD38_RS26550 PF02796 Helix-turn-helix domain of resolvase LMD38_RS26550 PF00665 Integrase core domain LMD38_RS26555 PF16363 GDP-mannose 4,6 dehydratase LMD38_RS26590 PF02293 AmiS/UreI family transporter LMD38_RS26600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LMD38_RS26600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LMD38_RS26605 PF02898 Nitric oxide synthase, oxygenase domain LMD38_RS26610 PF02028 BCCT, betaine/carnitine/choline family transporter LMD38_RS26615 PF07690 Major Facilitator Superfamily LMD38_RS26620 PF06580 Histidine kinase LMD38_RS26620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS26620 PF13492 GAF domain LMD38_RS26620 PF07694 5TMR of 5TMR-LYT LMD38_RS26625 PF04397 LytTr DNA-binding domain LMD38_RS26625 PF00072 Response regulator receiver domain LMD38_RS26630 PF03788 LrgA family LMD38_RS26635 PF04172 LrgB-like family LMD38_RS26640 PF01594 AI-2E family transporter LMD38_RS26645 PF01625 Peptide methionine sulfoxide reductase LMD38_RS26645 PF01641 SelR domain LMD38_RS26650 PF00873 AcrB/AcrD/AcrF family LMD38_RS26655 PF00440 Bacterial regulatory proteins, tetR family LMD38_RS26660 PF00535 Glycosyl transferase family 2 LMD38_RS26675 PF12848 ABC transporter LMD38_RS26675 PF00005 ABC transporter LMD38_RS26690 PF00535 Glycosyl transferase family 2 LMD38_RS26700 PF00535 Glycosyl transferase family 2 LMD38_RS26705 PF03061 Thioesterase superfamily LMD38_RS26735 PF07690 Major Facilitator Superfamily LMD38_RS26740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS26745 PF03458 UPF0126 domain LMD38_RS26755 PF00534 Glycosyl transferases group 1 LMD38_RS26755 PF13439 Glycosyltransferase Family 4 LMD38_RS26760 PF03808 Glycosyl transferase WecB/TagA/CpsF family LMD38_RS26765 PF07690 Major Facilitator Superfamily LMD38_RS26770 PF00072 Response regulator receiver domain LMD38_RS26770 PF04397 LytTr DNA-binding domain LMD38_RS26775 PF13722 5TM C-terminal transporter carbon starvation CstA LMD38_RS26775 PF02554 Carbon starvation protein CstA LMD38_RS26780 PF04328 Selenoprotein, putative LMD38_RS26785 PF07694 5TMR of 5TMR-LYT LMD38_RS26785 PF00990 Diguanylate cyclase, GGDEF domain LMD38_RS26790 PF08543 Phosphomethylpyrimidine kinase LMD38_RS26795 PF13185 GAF domain LMD38_RS26795 PF07730 Histidine kinase LMD38_RS26800 PF00072 Response regulator receiver domain LMD38_RS26800 PF00196 Bacterial regulatory proteins, luxR family LMD38_RS26805 PF02525 Flavodoxin-like fold LMD38_RS26810 PF00027 Cyclic nucleotide-binding domain LMD38_RS26815 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS26820 PF01053 Cys/Met metabolism PLP-dependent enzyme LMD38_RS26825 PF04204 Homoserine O-succinyltransferase LMD38_RS26830 PF03447 Homoserine dehydrogenase, NAD binding domain LMD38_RS26830 PF00742 Homoserine dehydrogenase LMD38_RS26830 PF01842 ACT domain LMD38_RS26840 PF00356 Bacterial regulatory proteins, lacI family LMD38_RS26840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LMD38_RS26845 PF13472 GDSL-like Lipase/Acylhydrolase family LMD38_RS26850 PF00005 ABC transporter LMD38_RS26855 PF12679 ABC-2 family transporter protein LMD38_RS26860 PF03167 Uracil DNA glycosylase superfamily LMD38_RS26865 PF12823 Domain of unknown function (DUF3817) LMD38_RS26875 PF00860 Permease family LMD38_RS26890 PF04241 Protein of unknown function (DUF423) LMD38_RS26895 PF09671 Spore coat protein (Spore_GerQ) LMD38_RS26900 PF07486 Cell Wall Hydrolase LMD38_RS26905 PF00768 D-alanyl-D-alanine carboxypeptidase LMD38_RS26905 PF07943 Penicillin-binding protein 5, C-terminal domain LMD38_RS26910 PF06778 Chlorite dismutase LMD38_RS26915 PF01515 Phosphate acetyl/butaryl transferase LMD38_RS26920 PF03099 Biotin/lipoate A/B protein ligase family LMD38_RS26930 PF07293 Protein of unknown function (DUF1450) LMD38_RS26935 PF01032 FecCD transport family LMD38_RS26940 PF01032 FecCD transport family LMD38_RS26945 PF00005 ABC transporter LMD38_RS26950 PF01497 Periplasmic binding protein LMD38_RS26955 PF01966 HD domain LMD38_RS26960 PF01361 Tautomerase enzyme LMD38_RS26965 PF02163 Peptidase family M50 LMD38_RS26970 PF08741 YwhD family LMD38_RS26975 PF00912 Transglycosylase LMD38_RS26975 PF00905 Penicillin binding protein transpeptidase domain LMD38_RS26980 PF03009 Glycerophosphoryl diester phosphodiesterase family LMD38_RS26985 PF13411 MerR HTH family regulatory protein LMD38_RS26990 PF07690 Major Facilitator Superfamily LMD38_RS26995 PF17284 Spermidine synthase tetramerisation domain LMD38_RS27000 PF00491 Arginase family LMD38_RS27015 PF17676 LD-carboxypeptidase C-terminal domain LMD38_RS27015 PF02016 LD-carboxypeptidase N-terminal domain LMD38_RS27020 PF09148 Domain of unknown function (DUF1934) LMD38_RS27025 PF03485 Arginyl tRNA synthetase N terminal domain LMD38_RS27025 PF00750 tRNA synthetases class I (R) LMD38_RS27025 PF05746 DALR anticodon binding domain LMD38_RS27035 PF00733 Asparagine synthase LMD38_RS27035 PF13537 Glutamine amidotransferase domain LMD38_RS27040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS27040 PF03466 LysR substrate binding domain LMD38_RS27060 PF00583 Acetyltransferase (GNAT) family LMD38_RS27065 PF01047 MarR family LMD38_RS27075 PF00392 Bacterial regulatory proteins, gntR family LMD38_RS27075 PF00155 Aminotransferase class I and II LMD38_RS27080 PF04299 Putative FMN-binding domain LMD38_RS27085 PF00701 Dihydrodipicolinate synthetase family LMD38_RS27095 PF02899 Phage integrase, N-terminal SAM-like domain LMD38_RS27095 PF00589 Phage integrase family LMD38_RS27100 PF00589 Phage integrase family LMD38_RS27100 PF02899 Phage integrase, N-terminal SAM-like domain LMD38_RS27110 PF18277 AbrB C-terminal domain LMD38_RS27110 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LMD38_RS27130 PF12323 Helix-turn-helix domain LMD38_RS27130 PF01385 Probable transposase LMD38_RS27130 PF07282 Putative transposase DNA-binding domain LMD38_RS27135 PF00216 Bacterial DNA-binding protein LMD38_RS27140 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LMD38_RS27155 PF04235 Protein of unknown function (DUF418) LMD38_RS27170 PF00475 Imidazoleglycerol-phosphate dehydratase LMD38_RS27175 PF03466 LysR substrate binding domain LMD38_RS27175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMD38_RS27180 PF01810 LysE type translocator LMD38_RS27230 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) LMD38_RS27430 PF12323 Helix-turn-helix domain LMD38_RS27430 PF01385 Probable transposase LMD38_RS27430 PF07282 Putative transposase DNA-binding domain LMD38_RS27445 PF00091 Tubulin/FtsZ family, GTPase domain LMD38_RS27460 PF17854 FtsK alpha domain LMD38_RS27460 PF09397 Ftsk gamma domain LMD38_RS27460 PF01580 FtsK/SpoIIIE family LMD38_RS27465 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LMD38_RS27525 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LMD38_RS27525 PF01348 Type II intron maturase LMD38_RS27580 PF01348 Type II intron maturase LMD38_RS27580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LMD38_RS27610 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 LMD38_RS27610 PF09000 Cytotoxic LMD38_RS27610 PF03515 Colicin-like bacteriocin tRNase domain LMD38_RS27615 PF00082 Subtilase family LMD38_RS27615 PF05922 Peptidase inhibitor I9 LMD38_RS27645 PF00082 Subtilase family LMD38_RS27670 PF02796 Helix-turn-helix domain of resolvase LMD38_RS27670 PF00239 Resolvase, N terminal domain LMD38_RS27690 PF01022 Bacterial regulatory protein, arsR family LMD38_RS27710 PF10899 Putative abortive phage resistance protein AbiGi, antitoxin LMD38_RS27720 PF08239 Bacterial SH3 domain LMD38_RS27720 PF00877 NlpC/P60 family LMD38_RS27720 PF01476 LysM domain LMD38_RS27735 PF02868 Thermolysin metallopeptidase, alpha-helical domain LMD38_RS27735 PF07504 Fungalysin/Thermolysin Propeptide Motif LMD38_RS27735 PF01447 Thermolysin metallopeptidase, catalytic domain LMD38_RS27735 PF03413 Peptidase propeptide and YPEB domain LMD38_RS27740 PF08447 PAS fold LMD38_RS27740 PF13426 PAS domain LMD38_RS27740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMD38_RS27745 PF00269 Small, acid-soluble spore proteins, alpha/beta type LMD38_RS27755 PF18416 N-acetylglucosamine binding protein domain 2 LMD38_RS27755 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LMD38_RS27785 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LMD38_RS27790 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LMD38_RS27830 PF08378 Nuclease-related domain LMD38_RS27860 PF00664 ABC transporter transmembrane region LMD38_RS27860 PF00005 ABC transporter LMD38_RS27890 PF13342 C-terminal repeat of topoisomerase LMD38_RS27890 PF01131 DNA topoisomerase LMD38_RS27890 PF01751 Toprim domain LMD38_RS27895 PF00565 Staphylococcal nuclease homologue LMD38_RS27910 PF02600 Disulfide bond formation protein DsbB LMD38_RS27915 PF01022 Bacterial regulatory protein, arsR family LMD38_RS27920 PF17209 Hfq protein LMD38_RS27935 PF18801 response regulator aspartate phosphatase H, N terminal LMD38_RS27980 PF00589 Phage integrase family LMD38_RS27990 PF00356 Bacterial regulatory proteins, lacI family LMD38_RS27990 PF13407 Periplasmic binding protein domain LMD38_RS27995 PF00367 phosphotransferase system, EIIB LMD38_RS27995 PF02378 Phosphotransferase system, EIIC LMD38_RS28000 PF00251 Glycosyl hydrolases family 32 N-terminal domain LMD38_RS28000 PF08244 Glycosyl hydrolases family 32 C terminal LMD38_RS28005 PF00294 pfkB family carbohydrate kinase LMD38_RS28025 PF02796 Helix-turn-helix domain of resolvase LMD38_RS28025 PF00665 Integrase core domain LMD38_RS28030 PF01695 IstB-like ATP binding protein LMD38_RS28045 PF00512 His Kinase A (phospho-acceptor) domain LMD38_RS28045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMD38_RS28045 PF16736 Single Cache-like LMD38_RS28045 PF00989 PAS fold LMD38_RS28050 PF00072 Response regulator receiver domain LMD38_RS28050 PF00486 Transcriptional regulatory protein, C terminal LMD38_RS28055 PF13529 Peptidase_C39 like family LMD38_RS28060 PF00857 Isochorismatase family LMD38_RS28070 PF05504 Spore germination B3/ GerAC like, C-terminal LMD38_RS28080 PF03323 Bacillus/Clostridium GerA spore germination protein LMD38_RS28095 PF18419 ATP-grasp-like domain LMD38_RS28095 PF04262 Glutamate-cysteine ligase LMD38_RS28095 PF02655 ATP-grasp domain LMD38_RS28105 PF00756 Putative esterase LMD38_RS28110 PF08240 Alcohol dehydrogenase GroES-like domain LMD38_RS28110 PF00107 Zinc-binding dehydrogenase LMD38_RS28115 PF01638 HxlR-like helix-turn-helix LMD38_RS28120 PF01609 Transposase DDE domain LMD38_RS28135 PF03323 Bacillus/Clostridium GerA spore germination protein LMD38_RS28140 PF03845 Spore germination protein LMD38_RS28150 PF02796 Helix-turn-helix domain of resolvase LMD38_RS28150 PF00239 Resolvase, N terminal domain LMD38_RS28155 PF00574 Clp protease LMD38_RS28160 PF04239 Protein of unknown function (DUF421) LMD38_RS28170 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LMD38_RS28175 PF07451 Stage V sporulation protein AD (SpoVAD) LMD38_RS28180 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LMD38_RS28200 PF04239 Protein of unknown function (DUF421) LMD38_RS28205 PF13091 PLD-like domain LMD38_RS28205 PF13396 Phospholipase_D-nuclease N-terminal LMD38_RS28220 PF13443 Cro/C1-type HTH DNA-binding domain LMD38_RS28225 PF11188 Protein of unknown function (DUF2975) LMD38_RS28230 PF00239 Resolvase, N terminal domain LMD38_RS28230 PF02796 Helix-turn-helix domain of resolvase LMD38_RS28235 PF13700 Domain of unknown function (DUF4158) LMD38_RS28235 PF01526 Tn3 transposase DDE domain LMD38_RS28260 PF01695 IstB-like ATP binding protein LMD38_RS28280 PF05036 Sporulation related domain LMD38_RS28280 PF01520 N-acetylmuramoyl-L-alanine amidase LMD38_RS28290 PF00239 Resolvase, N terminal domain LMD38_RS28290 PF02796 Helix-turn-helix domain of resolvase LMD38_RS28295 PF12833 Helix-turn-helix domain LMD38_RS28295 PF06445 GyrI-like small molecule binding domain LMD38_RS28300 PF00239 Resolvase, N terminal domain LMD38_RS28300 PF02796 Helix-turn-helix domain of resolvase LMD38_RS28310 PF02600 Disulfide bond formation protein DsbB LMD38_RS28315 PF00535 Glycosyl transferase family 2 LMD38_RS28320 PF00085 Thioredoxin LMD38_RS28325 PF03412 Peptidase C39 family LMD38_RS28325 PF00005 ABC transporter LMD38_RS28325 PF00664 ABC transporter transmembrane region LMD38_RS28340 PF00239 Resolvase, N terminal domain LMD38_RS28340 PF18010 Cry35Ab1 HTH C-terminal domain LMD38_RS28355 PF01022 Bacterial regulatory protein, arsR family LMD38_RS28375 PF14436 Bacterial EndoU nuclease LMD38_RS28375 PF04740 LXG domain of WXG superfamily LMD38_RS28405 PF02899 Phage integrase, N-terminal SAM-like domain LMD38_RS28405 PF00589 Phage integrase family LMD38_RS28420 PF01526 Tn3 transposase DDE domain LMD38_RS28420 PF13700 Domain of unknown function (DUF4158) LMD38_RS28425 PF00239 Resolvase, N terminal domain LMD38_RS28425 PF02796 Helix-turn-helix domain of resolvase LMD38_RS28430 PF00455 DeoR C terminal sensor domain LMD38_RS28430 PF08220 DeoR-like helix-turn-helix domain LMD38_RS28435 PF13419 Haloacid dehalogenase-like hydrolase LMD38_RS28440 PF01609 Transposase DDE domain LMD38_RS28450 PF01037 Lrp/AsnC ligand binding domain LMD38_RS28460 PF03831 PhnA domain LMD38_RS28460 PF08274 PhnA Zinc-Ribbon LMD38_RS28465 PF00550 Phosphopantetheine attachment site LMD38_RS28475 PF00916 Sulfate permease family LMD38_RS28475 PF01740 STAS domain LMD38_RS28485 PF01022 Bacterial regulatory protein, arsR family LMD38_RS28490 PF13529 Peptidase_C39 like family LMD38_RS28495 PF02796 Helix-turn-helix domain of resolvase LMD38_RS28495 PF00239 Resolvase, N terminal domain LMD38_RS28505 PF01526 Tn3 transposase DDE domain LMD38_RS28505 PF13700 Domain of unknown function (DUF4158) LMD38_RS28510 PF00239 Resolvase, N terminal domain LMD38_RS28510 PF02796 Helix-turn-helix domain of resolvase LMD38_RS28515 PF00011 Hsp20/alpha crystallin family LMD38_RS28520 PF06445 GyrI-like small molecule binding domain LMD38_RS28520 PF12833 Helix-turn-helix domain LMD38_RS28530 PF03323 Bacillus/Clostridium GerA spore germination protein LMD38_RS28535 PF03845 Spore germination protein LMD38_RS28555 PF12008 Type I restriction and modification enzyme - subunit R C terminal LMD38_RS28555 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LMD38_RS28555 PF18766 SWI2/SNF2 ATPase LMD38_RS28565 PF12161 HsdM N-terminal domain LMD38_RS28565 PF02384 N-6 DNA Methylase