locus-tag	class	description
CP942_RS00015	COG1846	Transcriptional regulator
CP942_RS00020	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CP942_RS00025	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CP942_RS00030	COG0456	acetyltransferase
CP942_RS00050	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CP942_RS00055	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CP942_RS00060	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CP942_RS00065	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CP942_RS00070	COG0456	acetyltransferase
CP942_RS00075	COG1509	lysine 2,3-aminomutase activity
CP942_RS00085	COG4479	Belongs to the UPF0346 family
CP942_RS00100	COG0671	phosphoesterase, PA-phosphatase related
CP942_RS00120	COG0701	Predicted permease
CP942_RS00125	COG0813	purine-nucleoside phosphorylase activity
CP942_RS00130	COG1876	peptidase activity
CP942_RS00140	COG2226	methyltransferase
CP942_RS00145	COG3409	Peptidoglycan-binding domain 1 protein
CP942_RS00145	COG0793	Belongs to the peptidase S41A family
CP942_RS00150	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CP942_RS00160	COG0400	carboxylic ester hydrolase activity
CP942_RS00165	COG0778	Nitroreductase
CP942_RS00170	COG1733	regulation of RNA biosynthetic process
CP942_RS00185	COG4305	rare lipoprotein A
CP942_RS00195	COG2962	Rard protein
CP942_RS00205	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CP942_RS00210	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CP942_RS00215	COG0534	Mate efflux family protein
CP942_RS00225	COG0791	NLP P60 protein
CP942_RS00225	COG1388	LysM domain
CP942_RS00230	COG2032	superoxide dismutase activity
CP942_RS00235	COG0714	Associated with various cellular activities
CP942_RS00240	COG4548	von Willebrand factor, type A
CP942_RS00245	COG0567	Dehydrogenase, E1 component
CP942_RS00250	COG0508	dehydrogenase complex catalyzes the overall conversion of
CP942_RS00255	COG0385	Bile acid
CP942_RS00260	COG0733	neurotransmitter:sodium symporter activity
CP942_RS00270	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CP942_RS00275	COG1657	PFAM Prenyltransferase squalene oxidase
CP942_RS00310	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CP942_RS00330	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CP942_RS00335	COG2318	DinB family
CP942_RS00355	COG0574	Belongs to the PEP-utilizing enzyme family
CP942_RS00355	COG3848	Pyruvate phosphate dikinase
CP942_RS00365	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CP942_RS00370	COG1280	lysine exporter protein (LysE YggA)
CP942_RS00385	COG2267	carboxylic ester hydrolase activity
CP942_RS00400	COG0402	S-adenosylhomocysteine deaminase activity
CP942_RS00425	COG2350	Protein conserved in bacteria
CP942_RS00450	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CP942_RS00460	COG5444	nuclease activity
CP942_RS00475	COG3383	formate dehydrogenase (NAD+) activity
CP942_RS00480	COG2427	Protein of unknown function (DUF1641)
CP942_RS00485	COG5444	nuclease activity
CP942_RS00490	COG2315	Protein conserved in bacteria
CP942_RS00510	COG0514	ATP-dependent DNA helicase (RecQ)
CP942_RS00515	COG1388	LysM domain
CP942_RS00515	COG3584	3D domain protein
CP942_RS00520	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CP942_RS00525	COG1619	proteins homologs of microcin C7 resistance protein MccF
CP942_RS00540	COG2322	membrane
CP942_RS00545	COG0438	transferase activity, transferring glycosyl groups
CP942_RS00560	COG1086	Polysaccharide biosynthesis protein
CP942_RS00565	COG0741	lytic transglycosylase activity
CP942_RS00570	COG0531	amino acid
CP942_RS00585	COG0640	Transcriptional regulator
CP942_RS00595	COG2378	regulation of single-species biofilm formation
CP942_RS00605	COG3708	Transcriptional regulator
CP942_RS00610	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP942_RS00615	COG1309	transcriptional regulator
CP942_RS00645	COG1846	Transcriptional regulator
CP942_RS00650	COG1309	transcriptional regulator
CP942_RS00660	COG1404	Belongs to the peptidase S8 family
CP942_RS00665	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CP942_RS00670	COG0840	transmembrane signaling receptor activity
CP942_RS00675	COG0488	(ABC) transporter
CP942_RS00680	COG0697	spore germination
CP942_RS00685	COG0531	amino acid
CP942_RS00690	COG0531	amino acid
CP942_RS00700	COG0531	amino acid
CP942_RS00705	COG2814	Major facilitator Superfamily
CP942_RS00710	COG1846	Transcriptional regulator
CP942_RS00715	COG0243	molybdopterin cofactor binding
CP942_RS00720	COG0477	Major facilitator Superfamily
CP942_RS00725	COG3848	Pyruvate phosphate dikinase
CP942_RS00725	COG0574	Belongs to the PEP-utilizing enzyme family
CP942_RS00730	COG0300	oxidoreductase activity
CP942_RS00740	COG1132	(ABC) transporter
CP942_RS00765	COG0583	DNA-binding transcription factor activity
CP942_RS00770	COG0069	glutamate synthase activity
CP942_RS00770	COG0067	glutamate synthase
CP942_RS00770	COG0070	glutamate synthase
CP942_RS00775	COG0493	'glutamate synthase
CP942_RS00790	COG0463	Glycosyl transferase, family 2
CP942_RS00795	COG2814	Major facilitator Superfamily
CP942_RS00800	COG4948	Mandelate Racemase Muconate Lactonizing
CP942_RS00805	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CP942_RS00810	COG1809	phosphosulfolactate synthase activity
CP942_RS00815	COG0175	sulfate reduction
CP942_RS00820	COG0306	phosphate transporter
CP942_RS00825	COG2323	membrane
CP942_RS00835	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CP942_RS00840	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CP942_RS00845	COG1733	regulation of RNA biosynthetic process
CP942_RS00850	COG2249	NAD(P)H dehydrogenase (quinone) activity
CP942_RS00855	COG1960	acyl-CoA dehydrogenase activity
CP942_RS00860	COG0318	PFAM AMP-dependent synthetase and ligase
CP942_RS00865	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS00870	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS00875	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS00880	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS00885	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
CP942_RS00885	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS00890	COG0439	Biotin carboxylase
CP942_RS00895	COG0511	ligase activity, forming carbon-carbon bonds
CP942_RS00900	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CP942_RS00905	COG1024	Enoyl-CoA hydratase
CP942_RS00910	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CP942_RS00915	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CP942_RS00925	COG0166	Belongs to the GPI family
CP942_RS00940	COG1252	NADH dehydrogenase
CP942_RS00945	COG1309	transcriptional regulator
CP942_RS00965	COG2027	D-alanyl-D-alanine carboxypeptidase
CP942_RS00970	COG0438	transferase activity, transferring glycosyl groups
CP942_RS00980	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CP942_RS00985	COG2404	hydrolase activity, acting on ester bonds
CP942_RS00990	COG1649	PFAM Uncharacterised BCR, COG1649
CP942_RS01005	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
CP942_RS01010	COG0640	Transcriptional regulator
CP942_RS01015	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CP942_RS01020	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CP942_RS01025	COG1609	Transcriptional regulator
CP942_RS01035	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CP942_RS01050	COG1312	Catalyzes the dehydration of D-mannonate
CP942_RS01055	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS01060	COG1725	Transcriptional regulator
CP942_RS01075	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS01075	COG3711	transcriptional antiterminator
CP942_RS01095	COG0582	viral genome integration into host DNA
CP942_RS01105	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS01105	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CP942_RS01105	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CP942_RS01110	COG1482	cell wall glycoprotein biosynthetic process
CP942_RS01115	COG1960	acyl-CoA dehydrogenase activity
CP942_RS01120	COG2084	Dehydrogenase
CP942_RS01125	COG1012	belongs to the aldehyde dehydrogenase family
CP942_RS01130	COG1024	Enoyl-CoA hydratase
CP942_RS01160	COG1114	Component of the transport system for branched-chain amino acids
CP942_RS01165	COG3420	alginic acid biosynthetic process
CP942_RS01170	COG0477	Major facilitator Superfamily
CP942_RS01200	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CP942_RS01210	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CP942_RS01230	COG2223	nitrite transmembrane transporter activity
CP942_RS01235	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP942_RS01245	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP942_RS01250	COG0535	radical SAM domain protein
CP942_RS01265	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CP942_RS01270	COG1140	nitrate reductase beta subunit
CP942_RS01275	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CP942_RS01280	COG2181	nitrate reductase activity
CP942_RS01290	COG1115	amino acid carrier protein
CP942_RS01310	COG2160	L-arabinose isomerase activity
CP942_RS01325	COG1609	Transcriptional regulator
CP942_RS01330	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CP942_RS01335	COG0187	DNA topoisomerase II activity
CP942_RS01340	COG1832	CoA-binding protein
CP942_RS01345	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CP942_RS01350	COG4841	protein insertion into membrane
CP942_RS01370	COG0824	Thioesterase
CP942_RS01390	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CP942_RS01395	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CP942_RS01410	COG0071	Belongs to the small heat shock protein (HSP20) family
CP942_RS01420	COG4846	Membrane protein involved in cytochrome C biogenesis
CP942_RS01425	COG2201	protein-glutamate methylesterase activity
CP942_RS01430	COG0785	Cytochrome C biogenesis protein
CP942_RS01440	COG3763	UPF0154 protein
CP942_RS01450	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CP942_RS01455	COG4224	UPF0291 protein
CP942_RS01460	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CP942_RS01465	COG1388	LysM domain
CP942_RS01470	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CP942_RS01480	COG3209	COG3209 Rhs family protein
CP942_RS01505	COG0655	NAD(P)H dehydrogenase (quinone) activity
CP942_RS01510	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CP942_RS01515	COG0346	lactoylglutathione lyase activity
CP942_RS01525	COG1846	Transcriptional regulator
CP942_RS01550	COG3546	catalase activity
CP942_RS01570	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP942_RS01575	COG2076	Multidrug Resistance protein
CP942_RS01580	COG2076	Multidrug Resistance protein
CP942_RS01585	COG1309	transcriptional regulator
CP942_RS01620	COG1073	alpha beta
CP942_RS01670	COG0174	glutamine synthetase
CP942_RS01675	COG0789	Transcriptional regulator
CP942_RS01680	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CP942_RS01685	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CP942_RS01690	COG0464	growth
CP942_RS01710	COG1695	Transcriptional regulator
CP942_RS01720	COG0829	nickel cation binding
CP942_RS01725	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CP942_RS01730	COG0830	nickel cation binding
CP942_RS01735	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
CP942_RS01745	COG0832	Belongs to the urease beta subunit family
CP942_RS01750	COG0831	urea catabolic process
CP942_RS01755	COG4413	Urea transporter
CP942_RS01765	COG2732	(Barnase) inhibitor
CP942_RS01770	COG4290	ribonuclease
CP942_RS01775	COG0457	Tetratricopeptide repeat
CP942_RS01780	COG2814	Major facilitator Superfamily
CP942_RS01815	COG1309	transcriptional regulator
CP942_RS01850	COG0697	spore germination
CP942_RS01855	COG1802	Transcriptional regulator
CP942_RS01860	COG0735	belongs to the Fur family
CP942_RS01875	COG4112	unkown
CP942_RS01880	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CP942_RS01885	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CP942_RS01890	COG1780	Probably involved in ribonucleotide reductase function
CP942_RS01905	COG1923	regulation of RNA biosynthetic process
CP942_RS01930	COG2076	Multidrug Resistance protein
CP942_RS01935	COG2076	Multidrug Resistance protein
CP942_RS01940	COG1764	response to oxidative stress
CP942_RS01950	COG0702	epimerase
CP942_RS01955	COG3631	Ketosteroid isomerase-related protein
CP942_RS01960	COG1309	transcriptional regulator
CP942_RS01965	COG3858	chitin binding
CP942_RS01965	COG1388	LysM domain
CP942_RS01975	COG5577	PFAM Coat F domain
CP942_RS01980	COG0531	amino acid
CP942_RS01985	COG1819	glycosyl
CP942_RS01990	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CP942_RS01995	COG0398	Pfam SNARE associated Golgi protein
CP942_RS02000	COG0393	Putative heavy-metal-binding
CP942_RS02020	COG2267	carboxylic ester hydrolase activity
CP942_RS02025	COG2814	Major facilitator Superfamily
CP942_RS02030	COG3263	regulation of cellular component size
CP942_RS02035	COG3619	membrane
CP942_RS02040	COG1231	oxidoreductase activity
CP942_RS02060	COG0523	cobalamin synthesis protein
CP942_RS02075	COG0457	Tetratricopeptide repeat
CP942_RS02095	COG0457	Tetratricopeptide repeat
CP942_RS02100	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CP942_RS02105	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CP942_RS02110	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CP942_RS02120	COG4550	Control of competence regulator ComK, YlbF/YmcA
CP942_RS02125	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CP942_RS02135	COG1063	alcohol dehydrogenase
CP942_RS02145	COG2359	stage V sporulation protein S
CP942_RS02150	COG1692	metallophosphoesterase
CP942_RS02155	COG1418	mRNA catabolic process
CP942_RS02165	COG1546	Belongs to the CinA family
CP942_RS02165	COG1058	Belongs to the CinA family
CP942_RS02170	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CP942_RS02175	COG1426	Protein conserved in bacteria
CP942_RS02190	COG0300	oxidoreductase activity
CP942_RS02195	COG0612	Peptidase, M16
CP942_RS02200	COG0612	Peptidase, M16
CP942_RS02205	COG2814	Major facilitator Superfamily
CP942_RS02210	COG2188	Transcriptional regulator
CP942_RS02215	COG1674	ftsk spoiiie
CP942_RS02215	COG4980	gas vesicle protein
CP942_RS02225	COG0740	serine-type endopeptidase activity
CP942_RS02230	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CP942_RS02240	COG0527	aspartate kinase activity
CP942_RS02245	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CP942_RS02250	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CP942_RS02255	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CP942_RS02260	COG1873	PFAM PRC-barrel domain
CP942_RS02265	COG0612	Peptidase, M16
CP942_RS02270	COG0726	polysaccharide deacetylase
CP942_RS02275	COG1185	polyribonucleotide nucleotidyltransferase activity
CP942_RS02280	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CP942_RS02285	COG0196	riboflavin kinase activity
CP942_RS02290	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CP942_RS02295	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CP942_RS02300	COG1550	Protein conserved in bacteria
CP942_RS02305	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CP942_RS02310	COG1358	cellular component organization or biogenesis
CP942_RS02315	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CP942_RS02320	COG0195	Participates in both transcription termination and antitermination
CP942_RS02325	COG0779	Required for maturation of 30S ribosomal subunits
CP942_RS02350	COG2176	DNA-directed DNA polymerase activity
CP942_RS02355	COG0442	prolyl-tRNA aminoacylation
CP942_RS02360	COG0750	zinc metalloprotease
CP942_RS02365	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CP942_RS02370	COG4589	Belongs to the CDS family
CP942_RS02375	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CP942_RS02380	COG0233	cytoplasmic translational termination
CP942_RS02385	COG0528	UMP kinase activity
CP942_RS02390	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CP942_RS02395	COG0052	Belongs to the universal ribosomal protein uS2 family
CP942_RS02405	COG1191	sigma factor activity
CP942_RS02410	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CP942_RS02415	COG1776	CheC inhibitor of MCP methylation
CP942_RS02420	COG0835	chemotaxis
CP942_RS02425	COG2198	Histidine kinase
CP942_RS02425	COG0643	Histidine kinase
CP942_RS02430	COG2201	protein-glutamate methylesterase activity
CP942_RS02435	COG0455	bacterial-type flagellum organization
CP942_RS02440	COG1419	protein localization to endoplasmic reticulum
CP942_RS02445	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CP942_RS02450	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CP942_RS02455	COG1684	flagellar biosynthetic protein fliR
CP942_RS02460	COG1987	bacterial-type flagellum assembly
CP942_RS02465	COG1338	Plays a role in the flagellum-specific transport system
CP942_RS02470	COG3190	flagellar
CP942_RS02475	COG2201	protein-glutamate methylesterase activity
CP942_RS02480	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CP942_RS02480	COG1776	CheC inhibitor of MCP methylation
CP942_RS02485	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CP942_RS02490	COG1580	Controls the rotational direction of flagella during chemotaxis
CP942_RS02495	COG1582	Flagellar protein (FlbD)
CP942_RS02500	COG4786	Flagellar basal body rod
CP942_RS02505	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CP942_RS02510	COG3144	bacterial-type flagellum assembly
CP942_RS02515	COG3334	PFAM MgtE intracellular
CP942_RS02520	COG2882	bacterial-type flagellum organization
CP942_RS02525	COG1157	protein secretion by the type III secretion system
CP942_RS02530	COG1317	bacterial-type flagellum organization
CP942_RS02535	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CP942_RS02540	COG1766	The M ring may be actively involved in energy transduction
CP942_RS02545	COG1677	Flagellar hook-basal body complex protein FliE
CP942_RS02550	COG1558	bacterial-type flagellum-dependent cell motility
CP942_RS02555	COG1815	bacterial-type flagellum-dependent cell motility
CP942_RS02560	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
CP942_RS02565	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CP942_RS02570	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CP942_RS02575	COG4974	Belongs to the 'phage' integrase family
CP942_RS02580	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CP942_RS02585	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CP942_RS02590	COG0758	DNA mediated transformation
CP942_RS02595	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CP942_RS02600	COG0045	succinate-CoA ligase (ADP-forming) activity
CP942_RS02605	COG2257	FlhB HrpN YscU SpaS Family
CP942_RS02615	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CP942_RS02620	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CP942_RS02625	COG0335	large ribosomal subunit rRNA binding
CP942_RS02630	COG0336	Belongs to the RNA methyltransferase TrmD family
CP942_RS02635	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CP942_RS02645	COG1837	Belongs to the UPF0109 family
CP942_RS02650	COG0228	four-way junction DNA binding
CP942_RS02655	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CP942_RS02660	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CP942_RS02665	COG0552	protein localization to endoplasmic reticulum
CP942_RS02670	COG1196	nuclear chromosome segregation
CP942_RS02675	COG0571	ribonuclease III activity
CP942_RS02680	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP942_RS02685	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS02690	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CP942_RS02695	COG0416	fatty acid biosynthetic process
CP942_RS02700	COG1349	DNA-binding transcription factor activity
CP942_RS02705	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CP942_RS02710	COG1760	l-serine dehydratase
CP942_RS02715	COG1760	l-serine dehydratase
CP942_RS02720	COG1461	Dihydroxyacetone kinase
CP942_RS02725	COG1302	Protein conserved in bacteria
CP942_RS02730	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CP942_RS02740	COG1564	THIamine pyrophosphokinase
CP942_RS02745	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CP942_RS02750	COG1162	GTPase activity
CP942_RS02755	COG0515	serine threonine protein kinase
CP942_RS02755	COG2815	serine threonine protein kinase
CP942_RS02760	COG0631	protein serine/threonine phosphatase activity
CP942_RS02765	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CP942_RS02770	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CP942_RS02770	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CP942_RS02775	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CP942_RS02780	COG0242	peptide deformylase activity
CP942_RS02785	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CP942_RS02790	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CP942_RS02795	COG1758	RNA polymerase activity
CP942_RS02800	COG0194	GDP metabolic process
CP942_RS02805	COG2052	Domain of unknown function (DUF370)
CP942_RS02810	COG1561	YicC-like family, N-terminal region
CP942_RS02815	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CP942_RS02825	COG1648	precorrin-2 dehydrogenase activity
CP942_RS02830	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
CP942_RS02835	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CP942_RS02840	COG0529	Catalyzes the synthesis of activated sulfate
CP942_RS02845	COG2046	Belongs to the sulfate adenylyltransferase family
CP942_RS02850	COG0306	phosphate transporter
CP942_RS02855	COG0175	sulfate reduction
CP942_RS02865	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CP942_RS02870	COG0284	orotidine-5'-phosphate decarboxylase activity
CP942_RS02875	COG0167	dihydroorotate dehydrogenase activity
CP942_RS02880	COG0543	2 iron, 2 sulfur cluster binding
CP942_RS02885	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CP942_RS02890	COG0505	Belongs to the CarA family
CP942_RS02895	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CP942_RS02900	COG0540	Belongs to the ATCase OTCase family
CP942_RS02905	COG2233	PERMEase
CP942_RS02915	COG0564	pseudouridine synthase activity
CP942_RS02920	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CP942_RS02925	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CP942_RS02930	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CP942_RS02935	COG3599	regulation of cell shape
CP942_RS02940	COG2302	S4 RNA-binding domain
CP942_RS02945	COG0762	integral membrane protein
CP942_RS02950	COG1799	cell septum assembly
CP942_RS02955	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CP942_RS02960	COG1496	oxidoreductase activity
CP942_RS02965	COG1873	PFAM PRC-barrel domain
CP942_RS02970	COG0500	methyltransferase
CP942_RS02975	COG1119	ATPase activity
CP942_RS02980	COG1191	sigma factor activity
CP942_RS02985	COG1191	sigma factor activity
CP942_RS03000	COG1404	Belongs to the peptidase S8 family
CP942_RS03000	COG4412	M6 family metalloprotease domain protein
CP942_RS03005	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CP942_RS03010	COG0849	cell division
CP942_RS03015	COG3856	small basic protein
CP942_RS03020	COG3879	Bacterial protein of unknown function (DUF881)
CP942_RS03025	COG3879	Bacterial protein of unknown function (DUF881)
CP942_RS03030	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CP942_RS03035	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CP942_RS03040	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CP942_RS03045	COG0772	Belongs to the SEDS family
CP942_RS03055	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CP942_RS03060	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CP942_RS03065	COG0768	penicillin binding
CP942_RS03070	COG0768	penicillin binding
CP942_RS03075	COG4839	cell division protein FtsL
CP942_RS03080	COG0275	rRNA processing
CP942_RS03085	COG2001	Belongs to the MraZ family
CP942_RS03090	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
CP942_RS03095	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CP942_RS03100	COG0454	-acetyltransferase
CP942_RS03110	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CP942_RS03115	COG1399	metal-binding, possibly nucleic acid-binding protein
CP942_RS03120	COG1323	Belongs to the UPF0348 family
CP942_RS03125	COG3480	Lon protease (S16) C-terminal proteolytic domain
CP942_RS03130	COG3314	Sporulation integral membrane protein YlbJ
CP942_RS03135	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CP942_RS03140	COG0742	ribosomal rna small subunit methyltransferase
CP942_RS03145	COG4471	UPF0298 protein
CP942_RS03150	COG3679	Belongs to the UPF0342 family
CP942_RS03165	COG2340	Cysteine-rich secretory protein family
CP942_RS03170	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CP942_RS03180	COG3336	cytochrome c oxidase
CP942_RS03185	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CP942_RS03190	COG1845	cytochrome c oxidase, subunit III
CP942_RS03195	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CP942_RS03200	COG2010	Cytochrome c
CP942_RS03200	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CP942_RS03205	COG0109	protoheme IX farnesyltransferase activity
CP942_RS03210	COG1612	heme a metabolic process
CP942_RS03215	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CP942_RS03220	COG0772	Belongs to the SEDS family
CP942_RS03225	COG4838	Belongs to the UPF0358 family
CP942_RS03230	COG2066	Belongs to the glutaminase family
CP942_RS03235	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CP942_RS03240	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CP942_RS03250	COG4896	Protein conserved in bacteria
CP942_RS03255	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CP942_RS03260	COG1846	Transcriptional regulator
CP942_RS03270	COG1217	gtp-binding protein TYPA
CP942_RS03285	COG1595	DNA-templated transcription, initiation
CP942_RS03305	COG0483	inositol monophosphate 1-phosphatase activity
CP942_RS03315	COG4493	Belongs to the UPF0637 family
CP942_RS03320	COG4476	Belongs to the UPF0223 family
CP942_RS03325	COG1982	Orn Lys Arg decarboxylase major
CP942_RS03335	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CP942_RS03340	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CP942_RS03345	COG0508	dehydrogenase complex catalyzes the overall conversion of
CP942_RS03350	COG0022	dehydrogenase e1 component
CP942_RS03355	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CP942_RS03360	COG0497	DNA recombination
CP942_RS03370	COG0242	peptide deformylase activity
CP942_RS03375	COG0561	phosphatase activity
CP942_RS03385	COG5503	Protein of unknown function (DUF1447)
CP942_RS03390	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CP942_RS03395	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CP942_RS03400	COG0569	domain protein
CP942_RS03405	COG3852	Histidine kinase
CP942_RS03410	COG2002	toxin-antitoxin pair type II binding
CP942_RS03415	COG1077	Cell shape determining protein MreB Mrl
CP942_RS03425	COG2309	aminopeptidase activity
CP942_RS03435	COG0488	(ABC) transporter
CP942_RS03455	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CP942_RS03455	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CP942_RS03455	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS03460	COG1105	Belongs to the carbohydrate kinase PfkB family
CP942_RS03465	COG1349	DNA-binding transcription factor activity
CP942_RS03470	COG0577	efflux transmembrane transporter activity
CP942_RS03475	COG1136	(ABC) transporter
CP942_RS03480	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CP942_RS03490	COG1132	(ABC) transporter
CP942_RS03495	COG1132	(ABC) transporter
CP942_RS03505	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CP942_RS03510	COG0314	molybdopterin synthase activity
CP942_RS03515	COG1763	Mo-molybdopterin cofactor biosynthetic process
CP942_RS03520	COG0303	'Molybdopterin
CP942_RS03525	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CP942_RS03530	COG0746	molybdenum cofactor guanylyltransferase activity
CP942_RS03545	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CP942_RS03550	COG0450	alkyl hydroperoxide reductase
CP942_RS03560	COG1473	amidohydrolase
CP942_RS03565	COG2171	N-acyltransferase activity
CP942_RS03570	COG0716	FMN binding
CP942_RS03580	COG0716	FMN binding
CP942_RS03585	COG0583	DNA-binding transcription factor activity
CP942_RS03590	COG0517	IMP dehydrogenase activity
CP942_RS03600	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
CP942_RS03605	COG4703	Protein of unknown function (DUF1797)
CP942_RS03620	COG2200	EAL domain
CP942_RS03625	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS03630	COG1408	metallophosphoesterase
CP942_RS03635	COG1376	ErfK ybiS ycfS ynhG family protein
CP942_RS03640	COG2814	Major facilitator Superfamily
CP942_RS03650	COG0784	Response regulator, receiver
CP942_RS03650	COG0835	chemotaxis
CP942_RS03660	COG1714	RDD family
CP942_RS03665	COG0436	Aminotransferase
CP942_RS03670	COG4191	Histidine kinase
CP942_RS03675	COG0768	penicillin binding
CP942_RS03680	COG2340	Cysteine-rich secretory protein family
CP942_RS03685	COG2084	Dehydrogenase
CP942_RS03690	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS03695	COG0840	transmembrane signaling receptor activity
CP942_RS03700	COG0456	acetyltransferase
CP942_RS03705	COG1533	DNA photolyase activity
CP942_RS03715	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CP942_RS03720	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS03725	COG1263	PTS System
CP942_RS03725	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS03725	COG2190	(PTS) system
CP942_RS03730	COG3711	transcriptional antiterminator
CP942_RS03735	COG1609	Transcriptional regulator
CP942_RS03745	COG0006	proline dipeptidase activity
CP942_RS03750	COG2217	Heavy metal translocating P-type atpase
CP942_RS03755	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CP942_RS03765	COG3773	Cell wall hydrolase
CP942_RS03775	COG4873	Protein conserved in bacteria
CP942_RS03810	COG3655	Transcriptional regulator
CP942_RS03815	COG3739	integral membrane protein
CP942_RS03855	COG0582	viral genome integration into host DNA
CP942_RS03970	COG0582	viral genome integration into host DNA
CP942_RS03975	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CP942_RS03980	COG0602	queuosine metabolic process
CP942_RS03985	COG0720	synthase
CP942_RS03990	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CP942_RS03995	COG3949	Membrane
CP942_RS04000	COG0542	response to heat
CP942_RS04005	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CP942_RS04010	COG1360	Flagellar Motor Protein
CP942_RS04015	COG1846	Transcriptional regulator
CP942_RS04020	COG3852	Histidine kinase
CP942_RS04030	COG3339	Conserved Protein
CP942_RS04035	COG0346	lactoylglutathione lyase activity
CP942_RS04040	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
CP942_RS04045	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
CP942_RS04045	COG0235	Class ii aldolase
CP942_RS04050	COG0235	Class ii aldolase
CP942_RS04050	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
CP942_RS04055	COG1850	ribulose-bisphosphate carboxylase activity
CP942_RS04060	COG0436	Aminotransferase
CP942_RS04065	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CP942_RS04070	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
CP942_RS04075	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
CP942_RS04080	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CP942_RS04085	COG5002	protein histidine kinase activity
CP942_RS04090	COG3594	Acyltransferase
CP942_RS04105	COG0768	penicillin binding
CP942_RS04110	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CP942_RS04115	COG0501	Belongs to the peptidase M48B family
CP942_RS04135	COG1191	sigma factor activity
CP942_RS04140	COG0861	Integral membrane protein TerC family
CP942_RS04145	COG0586	Pfam SNARE associated Golgi protein
CP942_RS04150	COG5001	Diguanylate cyclase
CP942_RS04150	COG3300	MHYT domain
CP942_RS04155	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CP942_RS04160	COG1793	dna ligase
CP942_RS04160	COG3285	dna ligase
CP942_RS04165	COG1846	Transcriptional regulator
CP942_RS04180	COG0789	Transcriptional regulator
CP942_RS04190	COG2239	Acts as a magnesium transporter
CP942_RS04200	COG1404	Belongs to the peptidase S8 family
CP942_RS04205	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CP942_RS04220	COG0406	alpha-ribazole phosphatase activity
CP942_RS04225	COG0590	tRNA wobble adenosine to inosine editing
CP942_RS04240	COG1846	Transcriptional regulator
CP942_RS04245	COG1764	response to oxidative stress
CP942_RS04250	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CP942_RS04255	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CP942_RS04265	COG0788	formyltetrahydrofolate deformylase activity
CP942_RS04270	COG2076	Multidrug Resistance protein
CP942_RS04275	COG2076	Multidrug Resistance protein
CP942_RS04280	COG2318	DinB family
CP942_RS04300	COG3866	Pectate lyase
CP942_RS04305	COG2323	membrane
CP942_RS04310	COG1607	acyl-coa hydrolase
CP942_RS04315	COG1834	amidinotransferase
CP942_RS04325	COG4608	Belongs to the ABC transporter superfamily
CP942_RS04330	COG0791	NLP P60 protein
CP942_RS04335	COG4948	Mandelate Racemase Muconate Lactonizing
CP942_RS04340	COG1619	proteins homologs of microcin C7 resistance protein MccF
CP942_RS04345	COG4166	transmembrane transport
CP942_RS04350	COG0444	Belongs to the ABC transporter superfamily
CP942_RS04355	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP942_RS04360	COG0601	transmembrane transport
CP942_RS04365	COG2362	D-Aminopeptidase
CP942_RS04370	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CP942_RS04375	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CP942_RS04380	COG0346	lactoylglutathione lyase activity
CP942_RS04385	COG0531	amino acid
CP942_RS04395	COG0395	ABC-type sugar transport system, permease component
CP942_RS04400	COG4209	transmembrane transport
CP942_RS04405	COG1653	transport
CP942_RS04415	COG1874	Beta-galactosidase
CP942_RS04420	COG2755	lipolytic protein G-D-S-L family
CP942_RS04430	COG3401	FG-GAP repeat protein
CP942_RS04435	COG2755	lipolytic protein G-D-S-L family
CP942_RS04445	COG3401	FG-GAP repeat protein
CP942_RS04450	COG5578	integral membrane protein
CP942_RS04460	COG2755	lipolytic protein G-D-S-L family
CP942_RS04465	COG2207	Transcriptional regulator
CP942_RS04470	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CP942_RS04475	COG0395	ABC-type sugar transport system, permease component
CP942_RS04480	COG1175	transmembrane transport
CP942_RS04485	COG1653	transport
CP942_RS04490	COG4753	response regulator
CP942_RS04490	COG2207	Transcriptional regulator
CP942_RS04500	COG5578	integral membrane protein
CP942_RS04505	COG0405	Gamma-glutamyltransferase
CP942_RS04510	COG1392	Phosphate transport regulator
CP942_RS04515	COG0306	phosphate transporter
CP942_RS04530	COG2271	Major facilitator Superfamily
CP942_RS04535	COG1063	alcohol dehydrogenase
CP942_RS04540	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS04545	COG1312	Catalyzes the dehydration of D-mannonate
CP942_RS04550	COG1063	alcohol dehydrogenase
CP942_RS04555	COG1802	Transcriptional regulator
CP942_RS04590	COG3778	Protein conserved in bacteria
CP942_RS04595	COG3299	homolog of phage Mu protein gp47
CP942_RS04600	COG3628	GPW Gp25 family protein
CP942_RS04610	COG4193	domain, Protein
CP942_RS04615	COG1652	LysM domain
CP942_RS04620	COG5280	Phage tail tape measure protein TP901
CP942_RS04620	COG3953	SLT domain
CP942_RS04670	COG4653	Phage capsid family
CP942_RS04675	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CP942_RS04680	COG5518	Phage portal protein
CP942_RS04685	COG1783	phage Terminase large subunit
CP942_RS04690	COG3728	DNA packaging
CP942_RS04690	COG5484	DNA packaging
CP942_RS04695	COG1595	DNA-templated transcription, initiation
CP942_RS04710	COG1484	DNA-dependent DNA replication
CP942_RS04715	COG1522	sequence-specific DNA binding
CP942_RS04730	COG1396	sequence-specific DNA binding
CP942_RS04735	COG2856	Zn peptidase
CP942_RS04740	COG4195	phage-related replication protein
CP942_RS04755	COG1309	transcriptional regulator
CP942_RS04760	COG2814	Major facilitator Superfamily
CP942_RS04765	COG3584	3D domain protein
CP942_RS04765	COG1388	LysM domain
CP942_RS04775	COG0346	lactoylglutathione lyase activity
CP942_RS04780	COG0697	spore germination
CP942_RS04785	COG0583	DNA-binding transcription factor activity
CP942_RS04790	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CP942_RS04795	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CP942_RS04800	COG0583	DNA-binding transcription factor activity
CP942_RS04810	COG0110	maltose O-acetyltransferase activity
CP942_RS04830	COG3507	Belongs to the glycosyl hydrolase 43 family
CP942_RS04840	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CP942_RS04855	COG5505	Protein of unknown function (DUF819)
CP942_RS04860	COG0626	cystathionine gamma-synthase activity
CP942_RS04865	COG0626	cystathionine gamma-synthase activity
CP942_RS04885	COG2382	esterase
CP942_RS04890	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CP942_RS04895	COG2153	protein acetylation
CP942_RS04900	COG2246	polysaccharide biosynthetic process
CP942_RS04905	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CP942_RS04910	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CP942_RS04915	COG0586	Pfam SNARE associated Golgi protein
CP942_RS04925	COG0210	DNA helicase
CP942_RS04980	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CP942_RS04985	COG0351	phosphomethylpyrimidine kinase
CP942_RS04990	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CP942_RS04995	COG2022	thiamine diphosphate biosynthetic process
CP942_RS05000	COG2104	thiamine diphosphate biosynthetic process
CP942_RS05010	COG0352	thiamine-phosphate diphosphorylase activity
CP942_RS05015	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CP942_RS05020	COG0569	domain protein
CP942_RS05020	COG0475	glutathione-regulated potassium exporter activity
CP942_RS05025	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CP942_RS05030	COG0564	pseudouridine synthase activity
CP942_RS05035	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CP942_RS05040	COG2357	RelA SpoT domain protein
CP942_RS05050	COG4116	CYTH
CP942_RS05055	COG0741	lytic transglycosylase activity
CP942_RS05065	COG2346	COG2346, Truncated hemoglobins
CP942_RS05070	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CP942_RS05080	COG1164	Oligoendopeptidase f
CP942_RS05085	COG4469	Competence protein
CP942_RS05090	COG3290	protein histidine kinase activity
CP942_RS05095	COG4565	transcriptional regulatory protein
CP942_RS05120	COG4862	establishment of competence for transformation
CP942_RS05125	COG0861	Integral membrane protein TerC family
CP942_RS05130	COG1393	Belongs to the ArsC family
CP942_RS05135	COG0456	acetyltransferase
CP942_RS05140	COG4608	Belongs to the ABC transporter superfamily
CP942_RS05145	COG0444	Belongs to the ABC transporter superfamily
CP942_RS05150	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP942_RS05155	COG0601	transmembrane transport
CP942_RS05160	COG4166	transmembrane transport
CP942_RS05170	COG0180	Tryptophanyl-tRNA synthetase
CP942_RS05195	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP942_RS05200	COG0601	transmembrane transport
CP942_RS05210	COG4608	Belongs to the ABC transporter superfamily
CP942_RS05215	COG0444	Belongs to the ABC transporter superfamily
CP942_RS05220	COG5504	Zn-dependent protease
CP942_RS05225	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CP942_RS05230	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CP942_RS05245	COG1744	ABC transporter substrate-binding protein PnrA-like
CP942_RS05255	COG2267	carboxylic ester hydrolase activity
CP942_RS05270	COG1968	undecaprenyl-diphosphatase activity
CP942_RS05275	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CP942_RS05280	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CP942_RS05285	COG0505	Belongs to the CarA family
CP942_RS05290	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CP942_RS05295	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CP942_RS05300	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CP942_RS05305	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CP942_RS05315	COG2151	metal-sulfur cluster biosynthetic enzyme
CP942_RS05320	COG1073	alpha beta
CP942_RS05325	COG0561	phosphatase activity
CP942_RS05335	COG0516	GMP reductase activity
CP942_RS05345	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CP942_RS05350	COG1307	EDD domain protein, DegV family
CP942_RS05365	COG2996	Protein conserved in bacteria
CP942_RS05370	COG1666	GTP binding
CP942_RS05375	COG0646	methionine synthase
CP942_RS05375	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CP942_RS05380	COG1410	methionine synthase
CP942_RS05380	COG0646	methionine synthase
CP942_RS05385	COG2378	regulation of single-species biofilm formation
CP942_RS05390	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS05395	COG2153	protein acetylation
CP942_RS05420	COG0076	glutamate decarboxylase activity
CP942_RS05430	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP942_RS05435	COG1279	arginine transmembrane transporter activity
CP942_RS05440	COG0697	spore germination
CP942_RS05455	COG0673	inositol 2-dehydrogenase activity
CP942_RS05460	COG1609	Transcriptional regulator
CP942_RS05470	COG1917	Cupin 2, conserved barrel domain protein
CP942_RS05470	COG2207	Transcriptional regulator
CP942_RS05475	COG0534	Mate efflux family protein
CP942_RS05480	COG0347	Belongs to the P(II) protein family
CP942_RS05485	COG0004	ammonium transporteR
CP942_RS05490	COG0367	asparagine synthase
CP942_RS05515	COG0179	Fumarylacetoacetate (FAA) hydrolase
CP942_RS05525	COG5337	Spore coat protein CotH
CP942_RS05570	COG0419	ATPase involved in DNA repair
CP942_RS05575	COG0420	3'-5' exonuclease activity
CP942_RS05580	COG1074	ATP-dependent DNA helicase activity
CP942_RS05585	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
CP942_RS05590	COG4149	molybdate abc transporter
CP942_RS05595	COG0725	ABC transporter, periplasmic molybdate-binding protein
CP942_RS05600	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CP942_RS05605	COG0745	RESPONSE REGULATOR receiver
CP942_RS05610	COG5002	protein histidine kinase activity
CP942_RS05620	COG4533	DNA binding
CP942_RS05625	COG0477	Major facilitator Superfamily
CP942_RS05625	COG2814	Major facilitator Superfamily
CP942_RS05630	COG0318	PFAM AMP-dependent synthetase and ligase
CP942_RS05635	COG3546	catalase activity
CP942_RS05650	COG3180	Ammonia monooxygenase
CP942_RS05655	COG1486	melibiose metabolic process
CP942_RS05660	COG0395	ABC-type sugar transport system, permease component
CP942_RS05665	COG1175	transmembrane transport
CP942_RS05670	COG1653	transport
CP942_RS05675	COG1609	Transcriptional regulator
CP942_RS05685	COG0457	Tetratricopeptide repeat
CP942_RS05695	COG2814	Major facilitator Superfamily
CP942_RS05700	COG0549	Belongs to the carbamate kinase family
CP942_RS05710	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CP942_RS05715	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CP942_RS05720	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CP942_RS05725	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CP942_RS05730	COG3257	ureidoglycine aminohydrolase activity
CP942_RS05735	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CP942_RS05740	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CP942_RS05745	COG2508	Transcriptional regulator
CP942_RS05755	COG1404	Belongs to the peptidase S8 family
CP942_RS05760	COG0681	Belongs to the peptidase S26 family
CP942_RS05765	COG0398	Pfam SNARE associated Golgi protein
CP942_RS05775	COG4903	ComK protein
CP942_RS05785	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS05790	COG0723	plastoquinol--plastocyanin reductase activity
CP942_RS05790	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CP942_RS05795	COG0840	transmembrane signaling receptor activity
CP942_RS05800	COG1268	BioY protein
CP942_RS05805	COG0318	PFAM AMP-dependent synthetase and ligase
CP942_RS05810	COG0183	Belongs to the thiolase family
CP942_RS05815	COG0406	alpha-ribazole phosphatase activity
CP942_RS05820	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS05825	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS05835	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CP942_RS05840	COG0697	spore germination
CP942_RS05850	COG0501	Belongs to the peptidase M48B family
CP942_RS05865	COG1396	sequence-specific DNA binding
CP942_RS05875	COG0318	PFAM AMP-dependent synthetase and ligase
CP942_RS05880	COG0095	Lipoate-protein ligase
CP942_RS05885	COG1234	tRNA 3'-trailer cleavage
CP942_RS05895	COG1301	dicarboxylic acid transport
CP942_RS05905	COG1363	Peptidase, m42
CP942_RS05910	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CP942_RS05915	COG1511	domain protein
CP942_RS05920	COG1309	transcriptional regulator
CP942_RS05925	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CP942_RS05930	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CP942_RS05935	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CP942_RS05940	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CP942_RS05945	COG2329	Antibiotic biosynthesis monooxygenase
CP942_RS05955	COG1473	amidohydrolase
CP942_RS05965	COG4473	ABC transporter
CP942_RS05970	COG1131	(ABC) transporter
CP942_RS05980	COG0537	adenosine 5'-monophosphoramidase activity
CP942_RS05985	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CP942_RS06000	COG4980	gas vesicle protein
CP942_RS06005	COG1846	Transcriptional regulator
CP942_RS06035	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CP942_RS06045	COG3481	metal-dependent phosphohydrolase, HD sub domain
CP942_RS06050	COG4717	serine-type aminopeptidase activity
CP942_RS06055	COG0420	3'-5' exonuclease activity
CP942_RS06060	COG1668	transmembrane transport
CP942_RS06065	COG4152	abc transporter atp-binding protein
CP942_RS06080	COG0457	Tetratricopeptide repeat
CP942_RS06085	COG1024	Enoyl-CoA hydratase
CP942_RS06090	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CP942_RS06095	COG0561	phosphatase activity
CP942_RS06105	COG3679	Belongs to the UPF0342 family
CP942_RS06110	COG4399	Belongs to the UPF0754 family
CP942_RS06115	COG0189	ligase activity
CP942_RS06120	COG0189	ligase activity
CP942_RS06130	COG2508	Transcriptional regulator
CP942_RS06135	COG3842	ATPase activity
CP942_RS06150	COG0702	epimerase
CP942_RS06155	COG1132	(ABC) transporter
CP942_RS06160	COG1132	(ABC) transporter
CP942_RS06165	COG0589	response to stress
CP942_RS06190	COG2017	converts alpha-aldose to the beta-anomer
CP942_RS06195	COG1757	Na H antiporter
CP942_RS06205	COG0726	polysaccharide deacetylase
CP942_RS06215	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CP942_RS06220	COG0668	transmembrane transport
CP942_RS06230	COG0584	glycerophosphoryl diester phosphodiesterase
CP942_RS06235	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CP942_RS06240	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CP942_RS06260	COG1253	flavin adenine dinucleotide binding
CP942_RS06265	COG0789	Transcriptional regulator
CP942_RS06270	COG1253	flavin adenine dinucleotide binding
CP942_RS06275	COG1309	transcriptional regulator
CP942_RS06285	COG3152	Membrane
CP942_RS06290	COG0204	Acyl-transferase
CP942_RS06295	COG0667	Aldo Keto reductase
CP942_RS06300	COG0662	Cupin 2, conserved barrel domain protein
CP942_RS06305	COG1595	DNA-templated transcription, initiation
CP942_RS06325	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP942_RS06330	COG3708	Transcriptional regulator
CP942_RS06330	COG2207	Transcriptional regulator
CP942_RS06340	COG0733	neurotransmitter:sodium symporter activity
CP942_RS06345	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS06350	COG2133	pyrroloquinoline quinone binding
CP942_RS06355	COG0372	Belongs to the citrate synthase family
CP942_RS06360	COG0583	DNA-binding transcription factor activity
CP942_RS06365	COG1388	LysM domain
CP942_RS06365	COG0791	NLP P60 protein
CP942_RS06370	COG2719	SpoVR family
CP942_RS06375	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CP942_RS06375	COG1017	nitric oxide dioxygenase activity
CP942_RS06380	COG1959	2 iron, 2 sulfur cluster binding
CP942_RS06395	COG0431	NADPH-dependent FMN reductase
CP942_RS06400	COG2197	response regulator
CP942_RS06405	COG4585	Histidine kinase
CP942_RS06405	COG2203	Gaf domain
CP942_RS06420	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CP942_RS06425	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CP942_RS06430	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CP942_RS06435	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CP942_RS06440	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CP942_RS06445	COG0604	alcohol dehydrogenase
CP942_RS06460	COG2116	formate transmembrane transporter activity
CP942_RS06465	COG0488	(ABC) transporter
CP942_RS06470	COG3153	acetyltransferase
CP942_RS06470	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CP942_RS06475	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CP942_RS06480	COG0517	IMP dehydrogenase activity
CP942_RS06490	COG0564	pseudouridine synthase activity
CP942_RS06495	COG3764	Sortase (surface protein transpeptidase)
CP942_RS06500	COG4085	toxin activity
CP942_RS06500	COG0737	Belongs to the 5'-nucleotidase family
CP942_RS06500	COG1525	nuclease
CP942_RS06505	COG5002	protein histidine kinase activity
CP942_RS06520	COG5577	PFAM Coat F domain
CP942_RS06545	COG1823	symporter activity
CP942_RS06550	COG1464	Belongs to the NlpA lipoprotein family
CP942_RS06555	COG2011	ABC-type metal ion transport system permease component
CP942_RS06560	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CP942_RS06565	COG1278	Cold shock
CP942_RS06570	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CP942_RS06575	COG1131	(ABC) transporter
CP942_RS06580	COG1131	(ABC) transporter
CP942_RS06585	COG1725	Transcriptional regulator
CP942_RS06600	COG0655	NAD(P)H dehydrogenase (quinone) activity
CP942_RS06605	COG2814	Major facilitator Superfamily
CP942_RS06610	COG1566	PFAM secretion protein HlyD family protein
CP942_RS06615	COG2718	Belongs to the UPF0229 family
CP942_RS06620	COG2766	serine protein kinase
CP942_RS06630	COG1664	Polymer-forming cytoskeletal
CP942_RS06635	COG0789	Transcriptional regulator
CP942_RS06640	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CP942_RS06650	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CP942_RS06655	COG3382	B3 4 domain protein
CP942_RS06665	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CP942_RS06685	COG1131	(ABC) transporter
CP942_RS06695	COG1476	TRANSCRIPTIONal
CP942_RS06705	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP942_RS06710	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CP942_RS06715	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CP942_RS06720	COG1116	anion transmembrane transporter activity
CP942_RS06725	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CP942_RS06730	COG0710	3-dehydroquinate dehydratase activity
CP942_RS06750	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CP942_RS06870	COG0735	belongs to the Fur family
CP942_RS06875	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CP942_RS06880	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CP942_RS06885	COG4129	membrane
CP942_RS06890	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP942_RS06895	COG0601	transmembrane transport
CP942_RS06900	COG0747	negative chemotaxis
CP942_RS06905	COG4608	Belongs to the ABC transporter superfamily
CP942_RS06910	COG0444	Belongs to the ABC transporter superfamily
CP942_RS06915	COG1132	(ABC) transporter
CP942_RS06920	COG3557	Belongs to the UPF0374 family
CP942_RS06935	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS06945	COG1194	a g-specific adenine glycosylase
CP942_RS06950	COG1988	membrane-bound metal-dependent
CP942_RS06955	COG4485	Bacterial membrane protein, YfhO
CP942_RS06965	COG0463	Glycosyl transferase, family 2
CP942_RS06995	COG2137	regulation of response to DNA damage stimulus
CP942_RS07000	COG1090	epimerase
CP942_RS07020	COG0778	Nitroreductase
CP942_RS07025	COG0384	phenazine biosynthesis protein PhzF
CP942_RS07030	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CP942_RS07030	COG0392	lysyltransferase activity
CP942_RS07040	COG1051	belongs to the nudix hydrolase family
CP942_RS07045	COG2249	NAD(P)H dehydrogenase (quinone) activity
CP942_RS07050	COG1653	transport
CP942_RS07055	COG2207	Transcriptional regulator
CP942_RS07055	COG1917	Cupin 2, conserved barrel domain protein
CP942_RS07060	COG3507	Belongs to the glycosyl hydrolase 43 family
CP942_RS07070	COG2514	catechol 2,3-dioxygenase activity
CP942_RS07075	COG2259	Doxx family
CP942_RS07080	COG1733	regulation of RNA biosynthetic process
CP942_RS07095	COG1263	PTS System
CP942_RS07095	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS07100	COG1737	Transcriptional regulator
CP942_RS07105	COG1486	melibiose metabolic process
CP942_RS07110	COG1742	UPF0060 membrane protein
CP942_RS07115	COG3284	Transcriptional regulator
CP942_RS07120	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CP942_RS07125	COG0508	dehydrogenase complex catalyzes the overall conversion of
CP942_RS07130	COG0022	dehydrogenase e1 component
CP942_RS07135	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CP942_RS07145	COG5609	conserved protein (DUF2294)
CP942_RS07150	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CP942_RS07155	COG3002	Belongs to the UPF0753 family
CP942_RS07160	COG0288	reversible hydration of carbon dioxide
CP942_RS07165	COG3711	transcriptional antiterminator
CP942_RS07170	COG1263	PTS System
CP942_RS07170	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS07180	COG0477	Major facilitator Superfamily
CP942_RS07190	COG1819	glycosyl
CP942_RS07215	COG4637	Psort location Cytoplasmic, score
CP942_RS07220	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CP942_RS07225	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CP942_RS07230	COG0598	Magnesium transport protein CorA
CP942_RS07240	COG0371	Dehydrogenase
CP942_RS07245	COG0726	polysaccharide deacetylase
CP942_RS07255	COG0535	radical SAM domain protein
CP942_RS07265	COG0387	Pfam Sodium calcium exchanger
CP942_RS07275	COG0477	Major facilitator Superfamily
CP942_RS07280	COG1295	ribonuclease BN
CP942_RS07285	COG4980	gas vesicle protein
CP942_RS07290	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CP942_RS07295	COG1115	amino acid carrier protein
CP942_RS07300	COG4840	Belongs to the UPF0435 family
CP942_RS07305	COG0693	protein deglycase activity
CP942_RS07310	COG0737	Belongs to the 5'-nucleotidase family
CP942_RS07315	COG0778	Nitroreductase
CP942_RS07320	COG1733	regulation of RNA biosynthetic process
CP942_RS07335	COG0673	inositol 2-dehydrogenase activity
CP942_RS07345	COG0463	Glycosyl transferase, family 2
CP942_RS07345	COG0457	Tetratricopeptide repeat
CP942_RS07350	COG1215	transferase activity, transferring glycosyl groups
CP942_RS07360	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CP942_RS07365	COG1045	serine acetyltransferase
CP942_RS07370	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CP942_RS07395	COG2188	Transcriptional regulator
CP942_RS07400	COG0366	Alpha amylase catalytic
CP942_RS07405	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS07405	COG1263	PTS System
CP942_RS07410	COG1115	amino acid carrier protein
CP942_RS07420	COG1368	sulfuric ester hydrolase activity
CP942_RS07425	COG0024	Methionine aminopeptidase
CP942_RS07435	COG2258	MOSC domain
CP942_RS07440	COG1254	Belongs to the acylphosphatase family
CP942_RS07445	COG0640	Transcriptional regulator
CP942_RS07450	COG5658	integral membrane protein
CP942_RS07455	COG3858	chitin binding
CP942_RS07460	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
CP942_RS07470	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP942_RS07485	COG0471	metal ion transport
CP942_RS07500	COG2130	NADP-dependent
CP942_RS07505	COG0513	Belongs to the DEAD box helicase family
CP942_RS07510	COG0488	(ABC) transporter
CP942_RS07520	COG2814	Major facilitator Superfamily
CP942_RS07525	COG0789	Transcriptional regulator
CP942_RS07535	COG2124	cytochrome p450
CP942_RS07540	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CP942_RS07545	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CP942_RS07550	COG0156	8-amino-7-oxononanoate synthase activity
CP942_RS07555	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CP942_RS07560	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
CP942_RS07565	COG0523	cobalamin synthesis protein
CP942_RS07580	COG1469	GTP cyclohydrolase I activity
CP942_RS07585	COG0640	Transcriptional regulator
CP942_RS07595	COG0583	DNA-binding transcription factor activity
CP942_RS07600	COG0488	(ABC) transporter
CP942_RS07605	COG0471	metal ion transport
CP942_RS07610	COG1309	transcriptional regulator
CP942_RS07615	COG0109	protoheme IX farnesyltransferase activity
CP942_RS07620	COG0840	transmembrane signaling receptor activity
CP942_RS07625	COG1012	belongs to the aldehyde dehydrogenase family
CP942_RS07655	COG0217	transcriptional regulatory protein
CP942_RS07660	COG0697	spore germination
CP942_RS07665	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP942_RS07670	COG0697	spore germination
CP942_RS07675	COG3586	endonuclease activity
CP942_RS07680	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
CP942_RS07680	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CP942_RS07695	COG0457	Tetratricopeptide repeat
CP942_RS07700	COG3711	transcriptional antiterminator
CP942_RS07705	COG2723	6-phospho-beta-galactosidase activity
CP942_RS07710	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS07710	COG2190	(PTS) system
CP942_RS07710	COG1263	PTS System
CP942_RS07725	COG0457	Tetratricopeptide repeat
CP942_RS07760	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CP942_RS07765	COG1597	lipid kinase activity
CP942_RS07770	COG1957	nucleoside hydrolase
CP942_RS07775	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP942_RS07785	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CP942_RS07790	COG1309	transcriptional regulator
CP942_RS07795	COG4124	Belongs to the glycosyl hydrolase 26 family
CP942_RS07810	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CP942_RS07815	COG0154	amidase activity
CP942_RS07820	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CP942_RS07825	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CP942_RS07830	COG1285	pathogenesis
CP942_RS07835	COG0363	glucosamine-6-phosphate deaminase activity
CP942_RS07840	COG3457	Alanine racemase
CP942_RS07845	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CP942_RS07850	COG0626	cystathionine gamma-synthase activity
CP942_RS07855	COG1735	metal-dependent hydrolase with the TIM-barrel fold
CP942_RS07875	COG2188	Transcriptional regulator
CP942_RS07880	COG4851	CamS sex pheromone cAM373 precursor
CP942_RS07885	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CP942_RS07890	COG0210	DNA helicase
CP942_RS07895	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
CP942_RS07900	COG4496	protein, YerC YecD
CP942_RS07905	COG1470	cell adhesion involved in biofilm formation
CP942_RS07910	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CP942_RS07935	COG2124	cytochrome p450
CP942_RS07945	COG0151	Belongs to the GarS family
CP942_RS07950	COG0138	bifunctional purine biosynthesis protein purh
CP942_RS07955	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CP942_RS07960	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CP942_RS07965	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CP942_RS07970	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CP942_RS07975	COG0047	phosphoribosylformylglycinamidine synthase activity
CP942_RS07980	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CP942_RS07985	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CP942_RS07990	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CP942_RS07995	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CP942_RS08000	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CP942_RS08010	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
CP942_RS08025	COG2252	PERMEase
CP942_RS08035	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CP942_RS08035	COG0519	Catalyzes the synthesis of GMP from XMP
CP942_RS08040	COG1305	Transglutaminase-like
CP942_RS08045	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
CP942_RS08050	COG0714	Associated with various cellular activities
CP942_RS08055	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CP942_RS08075	COG2132	Multicopper oxidase
CP942_RS08085	COG0702	epimerase
CP942_RS08115	COG0823	Involved in the tonB-independent uptake of proteins
CP942_RS08120	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CP942_RS08135	COG1846	Transcriptional regulator
CP942_RS08140	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CP942_RS08150	COG0366	Alpha amylase catalytic
CP942_RS08155	COG1554	hydrolase, family 65, central catalytic
CP942_RS08160	COG5521	maltodextrose utilization protein MalA
CP942_RS08165	COG3833	ABC-type maltose transport systems, permease component
CP942_RS08170	COG1175	transmembrane transport
CP942_RS08175	COG2182	Extracellular solute-binding protein
CP942_RS08180	COG0366	Alpha amylase catalytic
CP942_RS08185	COG1609	Transcriptional regulator
CP942_RS08195	COG0726	polysaccharide deacetylase
CP942_RS08215	COG0772	Belongs to the SEDS family
CP942_RS08220	COG0772	Belongs to the SEDS family
CP942_RS08225	COG3339	Conserved Protein
CP942_RS08230	COG1280	lysine exporter protein (LysE YggA)
CP942_RS08235	COG1378	Sugar-specific transcriptional regulator TrmB
CP942_RS08245	COG4260	virion core protein, lumpy skin disease virus
CP942_RS08250	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CP942_RS08255	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CP942_RS08260	COG1842	Phage shock protein A
CP942_RS08265	COG2814	Major facilitator Superfamily
CP942_RS08270	COG2272	Belongs to the type-B carboxylesterase lipase family
CP942_RS08275	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
CP942_RS08280	COG3189	MarR family transcriptional regulator
CP942_RS08290	COG0574	Belongs to the PEP-utilizing enzyme family
CP942_RS08290	COG3848	Pyruvate phosphate dikinase
CP942_RS08295	COG1309	transcriptional regulator
CP942_RS08305	COG2135	peptidase activity
CP942_RS08325	COG2720	vancomycin resistance protein
CP942_RS08340	COG4977	sequence-specific DNA binding
CP942_RS08340	COG1917	Cupin 2, conserved barrel domain protein
CP942_RS08350	COG0459	protein refolding
CP942_RS08355	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CP942_RS08360	COG1266	CAAX protease self-immunity
CP942_RS08375	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CP942_RS08380	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CP942_RS08385	COG0315	cyclic pyranopterin monophosphate synthase activity
CP942_RS08390	COG0488	(ABC) transporter
CP942_RS08395	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CP942_RS08400	COG0456	acetyltransferase
CP942_RS08405	COG1214	PFAM Peptidase M22, glycoprotease
CP942_RS08410	COG0802	atpase or kinase
CP942_RS08415	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CP942_RS08455	COG2814	Major facilitator Superfamily
CP942_RS08465	COG3764	Sortase (surface protein transpeptidase)
CP942_RS08475	COG3279	Response regulator of the LytR AlgR family
CP942_RS08480	COG0745	RESPONSE REGULATOR receiver
CP942_RS08480	COG2972	Histidine kinase
CP942_RS08485	COG1979	alcohol dehydrogenase
CP942_RS08490	COG2814	Major facilitator Superfamily
CP942_RS08495	COG0494	nUDIX hydrolase
CP942_RS08500	COG2755	lipolytic protein G-D-S-L family
CP942_RS08500	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CP942_RS08510	COG1595	DNA-templated transcription, initiation
CP942_RS08515	COG5566	PFAM Mor transcription activator
CP942_RS08520	COG0596	Alpha beta hydrolase
CP942_RS08540	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CP942_RS08550	COG1733	regulation of RNA biosynthetic process
CP942_RS08555	COG3545	Serine hydrolase
CP942_RS08575	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CP942_RS08580	COG1733	regulation of RNA biosynthetic process
CP942_RS08590	COG2808	Putative FMN-binding domain
CP942_RS08595	COG0456	acetyltransferase
CP942_RS08600	COG1846	Transcriptional regulator
CP942_RS08605	COG2364	Membrane
CP942_RS08615	COG0477	Major facilitator Superfamily
CP942_RS08620	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP942_RS08630	COG1278	Cold shock
CP942_RS08635	COG3239	Fatty acid desaturase
CP942_RS08640	COG1476	TRANSCRIPTIONal
CP942_RS08650	COG0726	polysaccharide deacetylase
CP942_RS08655	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CP942_RS08665	COG0640	Transcriptional regulator
CP942_RS08670	COG0640	Transcriptional regulator
CP942_RS08720	COG3091	SprT-like family
CP942_RS08730	COG1033	growth of symbiont in host cell
CP942_RS08730	COG2409	Drug exporters of the RND superfamily
CP942_RS08740	COG1309	transcriptional regulator
CP942_RS08745	COG2183	response to ionizing radiation
CP942_RS08750	COG2208	phosphoserine phosphatase activity
CP942_RS08755	COG1191	sigma factor activity
CP942_RS08770	COG2208	phosphoserine phosphatase activity
CP942_RS08775	COG2172	sigma factor antagonist activity
CP942_RS08780	COG1366	Belongs to the anti-sigma-factor antagonist family
CP942_RS08785	COG1366	Belongs to the anti-sigma-factor antagonist family
CP942_RS08790	COG2337	Toxic component of a toxin-antitoxin (TA) module
CP942_RS08795	COG0864	Transcriptional regulator
CP942_RS08800	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CP942_RS08805	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CP942_RS08810	COG0705	Rhomboid family
CP942_RS08815	COG3428	Bacterial PH domain
CP942_RS08820	COG3402	PFAM membrane-flanked domain
CP942_RS08825	COG0513	Belongs to the DEAD box helicase family
CP942_RS08835	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CP942_RS08840	COG1181	Belongs to the D-alanine--D-alanine ligase family
CP942_RS08845	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CP942_RS08860	COG1960	acyl-CoA dehydrogenase activity
CP942_RS08870	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CP942_RS08875	COG1131	(ABC) transporter
CP942_RS08880	COG1301	dicarboxylic acid transport
CP942_RS08885	COG0628	permease
CP942_RS08895	COG0662	Cupin 2, conserved barrel domain protein
CP942_RS08905	COG2217	Heavy metal translocating P-type atpase
CP942_RS08910	COG4876	unkown
CP942_RS08915	COG1819	glycosyl
CP942_RS08920	COG1027	Aspartate ammonia-lyase
CP942_RS08925	COG2261	transglycosylase associated protein
CP942_RS08930	COG1914	H( )-stimulated, divalent metal cation uptake system
CP942_RS08935	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP942_RS08950	COG0028	Belongs to the TPP enzyme family
CP942_RS08955	COG1605	Chorismate mutase
CP942_RS08960	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CP942_RS08960	COG0512	Glutamine amidotransferase of anthranilate synthase
CP942_RS08965	COG0287	Prephenate dehydrogenase
CP942_RS08970	COG0551	DNA topoisomerase type I activity
CP942_RS08970	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CP942_RS08975	COG1522	sequence-specific DNA binding
CP942_RS08985	COG2814	Major facilitator Superfamily
CP942_RS09000	COG3871	stress protein (general stress protein 26)
CP942_RS09010	COG1917	Cupin 2, conserved barrel domain protein
CP942_RS09015	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS09025	COG0246	Mannitol dehydrogenase
CP942_RS09030	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS09035	COG2213	PTS system mannitol-specific
CP942_RS09040	COG2755	lipolytic protein G-D-S-L family
CP942_RS09045	COG1414	Transcriptional regulator
CP942_RS09050	COG1984	allophanate hydrolase subunit 2
CP942_RS09055	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CP942_RS09060	COG4336	lyase activity
CP942_RS09065	COG1914	H( )-stimulated, divalent metal cation uptake system
CP942_RS09070	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CP942_RS09075	COG0561	phosphatase activity
CP942_RS09080	COG3958	Transketolase
CP942_RS09085	COG3959	Transketolase, thiamine diphosphate binding domain
CP942_RS09100	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS09110	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CP942_RS09115	COG0471	metal ion transport
CP942_RS09120	COG1802	Transcriptional regulator
CP942_RS09125	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CP942_RS09125	COG1587	Uroporphyrinogen-III synthase
CP942_RS09130	COG2146	nitrite reductase [NAD(P)H] activity
CP942_RS09135	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CP942_RS09140	COG0243	molybdopterin cofactor binding
CP942_RS09145	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CP942_RS09150	COG1349	DNA-binding transcription factor activity
CP942_RS09155	COG1276	copper resistance
CP942_RS09155	COG2372	response to copper ion
CP942_RS09160	COG4549	nuclear export factor GLE1
CP942_RS09170	COG0697	spore germination
CP942_RS09175	COG1012	belongs to the aldehyde dehydrogenase family
CP942_RS09180	COG0531	amino acid
CP942_RS09185	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CP942_RS09190	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP942_RS09195	COG0640	Transcriptional regulator
CP942_RS09200	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CP942_RS09205	COG0778	Nitroreductase
CP942_RS09215	COG1309	transcriptional regulator
CP942_RS09220	COG2814	Major facilitator Superfamily
CP942_RS09225	COG4607	ABC-type enterochelin transport system periplasmic component
CP942_RS09230	COG4604	ABC transporter, ATP-binding protein
CP942_RS09235	COG4605	iron ion homeostasis
CP942_RS09240	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS09245	COG0527	aspartate kinase activity
CP942_RS09250	COG0840	transmembrane signaling receptor activity
CP942_RS09255	COG5002	protein histidine kinase activity
CP942_RS09255	COG3850	Histidine kinase
CP942_RS09260	COG0745	RESPONSE REGULATOR receiver
CP942_RS09265	COG0577	efflux transmembrane transporter activity
CP942_RS09270	COG1136	(ABC) transporter
CP942_RS09275	COG0789	Transcriptional regulator
CP942_RS09280	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CP942_RS09290	COG0697	spore germination
CP942_RS09300	COG5434	Belongs to the glycosyl hydrolase 28 family
CP942_RS09305	COG3104	oligopeptide transport
CP942_RS09315	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
CP942_RS09320	COG1874	Beta-galactosidase
CP942_RS09325	COG0456	acetyltransferase
CP942_RS09325	COG1846	Transcriptional regulator
CP942_RS09330	COG2271	Major facilitator Superfamily
CP942_RS09335	COG4214	carbohydrate transport
CP942_RS09345	COG4213	ABC transporter substrate-binding protein
CP942_RS09350	COG2207	Transcriptional regulator
CP942_RS09350	COG4753	response regulator
CP942_RS09425	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CP942_RS09430	COG0163	prenyltransferase activity
CP942_RS09435	COG0583	DNA-binding transcription factor activity
CP942_RS09440	COG0010	Belongs to the arginase family
CP942_RS09445	COG0833	amino acid
CP942_RS09450	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CP942_RS09455	COG3829	transcription factor binding
CP942_RS09460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CP942_RS09465	COG0765	amino acid transport
CP942_RS09470	COG1126	abc transporter atp-binding protein
CP942_RS09490	COG0667	Aldo Keto reductase
CP942_RS09495	COG2124	cytochrome p450
CP942_RS09500	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS09515	COG3321	synthase
CP942_RS09515	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS09515	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP942_RS09515	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS09515	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS09515	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP942_RS09515	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CP942_RS09515	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CP942_RS09515	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS09515	COG3321	synthase
CP942_RS09520	COG3321	synthase
CP942_RS09520	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS09520	COG4221	oxidoreductase activity
CP942_RS09520	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS09530	COG3321	synthase
CP942_RS09530	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP942_RS09530	COG4221	oxidoreductase activity
CP942_RS09530	COG0300	oxidoreductase activity
CP942_RS09560	COG4221	oxidoreductase activity
CP942_RS09560	COG3321	synthase
CP942_RS09560	COG0300	oxidoreductase activity
CP942_RS09560	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP942_RS09580	COG1024	Enoyl-CoA hydratase
CP942_RS09585	COG1024	Enoyl-CoA hydratase
CP942_RS09590	COG3425	synthase
CP942_RS09595	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CP942_RS09600	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP942_RS09605	COG4221	oxidoreductase activity
CP942_RS09605	COG0300	oxidoreductase activity
CP942_RS09605	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP942_RS09605	COG3321	synthase
CP942_RS09610	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP942_RS09610	COG0300	oxidoreductase activity
CP942_RS09610	COG3321	synthase
CP942_RS09610	COG4221	oxidoreductase activity
CP942_RS09615	COG3321	synthase
CP942_RS09615	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS09615	COG4221	oxidoreductase activity
CP942_RS09615	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS09635	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP942_RS09675	COG2364	Membrane
CP942_RS09680	COG3708	Transcriptional regulator
CP942_RS09680	COG2207	Transcriptional regulator
CP942_RS09685	COG2819	hydrolase of the alpha beta superfamily
CP942_RS09695	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP942_RS09700	COG0697	spore germination
CP942_RS09705	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
CP942_RS09715	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS09720	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS09725	COG1177	transmembrane transport
CP942_RS09735	COG3842	ATPase activity
CP942_RS09755	COG5444	nuclease activity
CP942_RS09765	COG3209	COG3209 Rhs family protein
CP942_RS09775	COG2723	6-phospho-beta-galactosidase activity
CP942_RS09780	COG1116	anion transmembrane transporter activity
CP942_RS09785	COG2249	NAD(P)H dehydrogenase (quinone) activity
CP942_RS09790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CP942_RS09795	COG0765	amino acid transport
CP942_RS09815	COG3458	cephalosporin-C deacetylase activity
CP942_RS09820	COG0701	Predicted permease
CP942_RS09825	COG3689	TIGRFAM TIGR03943 family protein
CP942_RS09830	COG2508	Transcriptional regulator
CP942_RS09835	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CP942_RS09840	COG1012	belongs to the aldehyde dehydrogenase family
CP942_RS09845	COG0506	proline dehydrogenase activity
CP942_RS09850	COG3541	Predicted nucleotidyltransferase
CP942_RS09855	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CP942_RS09860	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CP942_RS09865	COG1113	amino acid transport
CP942_RS09870	COG1280	lysine exporter protein (LysE YggA)
CP942_RS09875	COG1620	l-lactate permease
CP942_RS09880	COG0039	L-malate dehydrogenase activity
CP942_RS09885	COG2223	nitrite transmembrane transporter activity
CP942_RS09895	COG0785	Cytochrome C biogenesis protein
CP942_RS09900	COG3853	Toxic anion resistance protein (TelA)
CP942_RS09920	COG0861	Integral membrane protein TerC family
CP942_RS09925	COG2310	stress, protein
CP942_RS09930	COG2310	stress, protein
CP942_RS09935	COG2310	stress, protein
CP942_RS09955	COG1309	transcriptional regulator
CP942_RS09960	COG1131	(ABC) transporter
CP942_RS09970	COG0791	NLP P60 protein
CP942_RS09970	COG3883	PFAM NLP P60 protein
CP942_RS09975	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP942_RS09980	COG3773	Cell wall hydrolase
CP942_RS09990	COG1595	DNA-templated transcription, initiation
CP942_RS10000	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS10005	COG3591	Belongs to the peptidase S1B family
CP942_RS10020	COG3394	polysaccharide catabolic process
CP942_RS10025	COG2188	Transcriptional regulator
CP942_RS10030	COG1486	melibiose metabolic process
CP942_RS10035	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CP942_RS10040	COG1447	Phosphotransferase system cellobiose-specific component IIA
CP942_RS10045	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CP942_RS10050	COG0277	FAD linked oxidase domain protein
CP942_RS10055	COG0247	lactate metabolic process
CP942_RS10065	COG2261	transglycosylase associated protein
CP942_RS10070	COG1164	Oligoendopeptidase f
CP942_RS10080	COG0456	acetyltransferase
CP942_RS10085	COG0252	asparaginase activity
CP942_RS10095	COG1288	antiporter activity
CP942_RS10110	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS10115	COG1942	4-Oxalocrotonate Tautomerase
CP942_RS10120	COG0583	DNA-binding transcription factor activity
CP942_RS10145	COG1131	(ABC) transporter
CP942_RS10150	COG3012	SEC-C Motif Domain Protein
CP942_RS10150	COG1405	negative regulation of cell septum assembly
CP942_RS10160	COG0697	spore germination
CP942_RS10185	COG0789	Transcriptional regulator
CP942_RS10205	COG0318	PFAM AMP-dependent synthetase and ligase
CP942_RS10210	COG1846	Transcriptional regulator
CP942_RS10215	COG3173	Aminoglycoside phosphotransferase
CP942_RS10240	COG1131	(ABC) transporter
CP942_RS10245	COG2205	protein histidine kinase activity
CP942_RS10250	COG0745	RESPONSE REGULATOR receiver
CP942_RS10270	COG2721	sulfolactate sulfo-lyase activity
CP942_RS10275	COG2186	Transcriptional regulator
CP942_RS10280	COG4948	Mandelate Racemase Muconate Lactonizing
CP942_RS10285	COG2271	Major facilitator Superfamily
CP942_RS10290	COG1012	belongs to the aldehyde dehydrogenase family
CP942_RS10295	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CP942_RS10300	COG0805	protein transport
CP942_RS10305	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CP942_RS10310	COG3540	Alkaline phosphatase
CP942_RS10335	COG0784	Response regulator, receiver
CP942_RS10345	COG2066	Belongs to the glutaminase family
CP942_RS10350	COG1115	amino acid carrier protein
CP942_RS10355	COG2205	protein histidine kinase activity
CP942_RS10365	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CP942_RS10365	COG4451	ribulose bisphosphate carboxylase, small
CP942_RS10370	COG2323	membrane
CP942_RS10380	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS10380	COG1263	PTS System
CP942_RS10390	COG2040	homocysteine
CP942_RS10395	COG0833	amino acid
CP942_RS10405	COG4257	antibiotic catabolic process
CP942_RS10420	COG0371	Dehydrogenase
CP942_RS10435	COG2197	response regulator
CP942_RS10445	COG2207	Transcriptional regulator
CP942_RS10445	COG1917	Cupin 2, conserved barrel domain protein
CP942_RS10450	COG0697	spore germination
CP942_RS10475	COG4682	membrane
CP942_RS10480	COG1283	sodium-dependent phosphate transmembrane transporter activity
CP942_RS10500	COG0730	response to heat
CP942_RS10505	COG1802	Transcriptional regulator
CP942_RS10530	COG0076	glutamate decarboxylase activity
CP942_RS10560	COG2002	toxin-antitoxin pair type II binding
CP942_RS10570	COG3764	Sortase (surface protein transpeptidase)
CP942_RS10595	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS10610	COG1331	Highly conserved protein containing a thioredoxin domain
CP942_RS10630	COG2211	Major facilitator Superfamily
CP942_RS10645	COG1011	Hydrolase
CP942_RS10680	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CP942_RS10685	COG1132	(ABC) transporter
CP942_RS10695	COG2814	Major facilitator Superfamily
CP942_RS10700	COG0640	Transcriptional regulator
CP942_RS10710	COG0789	Transcriptional regulator
CP942_RS10720	COG1725	Transcriptional regulator
CP942_RS10740	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CP942_RS10745	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CP942_RS10750	COG4856	YbbR-like protein
CP942_RS10755	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CP942_RS10760	COG5662	AntiSigma factor
CP942_RS10765	COG1595	DNA-templated transcription, initiation
CP942_RS10800	COG1683	Conserved Protein
CP942_RS10805	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CP942_RS10810	COG1737	Transcriptional regulator
CP942_RS10815	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS10815	COG1263	PTS System
CP942_RS10820	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CP942_RS10825	COG1472	Belongs to the glycosyl hydrolase 3 family
CP942_RS10830	COG3876	Protein conserved in bacteria
CP942_RS10845	COG0385	Bile acid
CP942_RS10855	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CP942_RS10885	COG0726	polysaccharide deacetylase
CP942_RS10890	COG2194	sulfuric ester hydrolase activity
CP942_RS10900	COG0489	protein tyrosine kinase activity
CP942_RS10905	COG0860	N-Acetylmuramoyl-L-alanine amidase
CP942_RS10920	COG2318	DinB family
CP942_RS10925	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CP942_RS10930	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CP942_RS10935	COG0101	tRNA pseudouridine synthase activity
CP942_RS10940	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CP942_RS10945	COG1122	ATPase activity
CP942_RS10950	COG1122	ATPase activity
CP942_RS10955	COG0203	ribosomal protein L17
CP942_RS10960	COG0202	RNA polymerase activity
CP942_RS10965	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CP942_RS10970	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CP942_RS10975	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CP942_RS10980	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CP942_RS10985	COG2163	COG2163 Ribosomal protein L14E L6E L27E
CP942_RS10990	COG0024	Methionine aminopeptidase
CP942_RS10995	COG0563	adenylate kinase activity
CP942_RS11000	COG0201	protein transport
CP942_RS11005	COG0200	Binds to the 23S rRNA
CP942_RS11010	COG1841	ribosomal large subunit assembly
CP942_RS11015	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CP942_RS11020	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CP942_RS11025	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CP942_RS11030	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CP942_RS11035	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CP942_RS11040	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CP942_RS11045	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CP942_RS11050	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CP942_RS11055	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CP942_RS11060	COG0255	Belongs to the universal ribosomal protein uL29 family
CP942_RS11065	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CP942_RS11070	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CP942_RS11075	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CP942_RS11080	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CP942_RS11090	COG0089	rRNA binding
CP942_RS11095	COG0088	Forms part of the polypeptide exit tunnel
CP942_RS11100	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CP942_RS11110	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CP942_RS11115	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CP942_RS11120	COG0049	tRNA binding
CP942_RS11125	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CP942_RS11130	COG1358	cellular component organization or biogenesis
CP942_RS11135	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CP942_RS11140	COG0085	RNA polymerase activity
CP942_RS11145	COG2813	Specifically methylates the guanine in position
CP942_RS11150	COG0222	ribosome binding
CP942_RS11155	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CP942_RS11160	COG0081	regulation of translation
CP942_RS11165	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CP942_RS11170	COG0250	Participates in transcription elongation, termination and antitermination
CP942_RS11190	COG3688	RNA-binding protein containing a PIN domain
CP942_RS11195	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CP942_RS11200	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CP942_RS11205	COG0215	cysteine-tRNA ligase activity
CP942_RS11210	COG1045	serine acetyltransferase
CP942_RS11215	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CP942_RS11220	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CP942_RS11225	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CP942_RS11230	COG4956	integral membrane protein (PIN domain superfamily)
CP942_RS11235	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
CP942_RS11240	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CP942_RS11245	COG0542	response to heat
CP942_RS11250	COG3869	Catalyzes the specific phosphorylation of arginine residues in
CP942_RS11255	COG3880	PFAM UvrB UvrC protein
CP942_RS11260	COG4463	regulation of RNA biosynthetic process
CP942_RS11340	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CP942_RS11345	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CP942_RS11350	COG1396	sequence-specific DNA binding
CP942_RS11355	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CP942_RS11360	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CP942_RS11365	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CP942_RS11370	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CP942_RS11375	COG0512	Glutamine amidotransferase of anthranilate synthase
CP942_RS11380	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CP942_RS11390	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP942_RS11395	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CP942_RS11400	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CP942_RS11405	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CP942_RS11410	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CP942_RS11415	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CP942_RS11420	COG0037	tRNA processing
CP942_RS11425	COG0515	serine threonine protein kinase
CP942_RS11430	COG2304	oxidoreductase activity
CP942_RS11435	COG2208	phosphoserine phosphatase activity
CP942_RS11450	COG1098	S1 RNA binding domain
CP942_RS11455	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CP942_RS11470	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CP942_RS11475	COG3956	TIGRFAM MazG family protein
CP942_RS11480	COG2244	polysaccharide biosynthetic process
CP942_RS11485	COG2002	toxin-antitoxin pair type II binding
CP942_RS11490	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CP942_RS11500	COG0193	aminoacyl-tRNA hydrolase activity
CP942_RS11505	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CP942_RS11510	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CP942_RS11515	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CP942_RS11520	COG2088	sporulation resulting in formation of a cellular spore
CP942_RS11525	COG0251	oxidation-reduction process
CP942_RS11530	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CP942_RS11535	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CP942_RS11545	COG4466	Protein conserved in bacteria
CP942_RS11555	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CP942_RS11565	COG3584	3D domain protein
CP942_RS11565	COG3583	domain protein
CP942_RS11570	COG0084	hydrolase, TatD family'
CP942_RS11575	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CP942_RS11575	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CP942_RS11580	COG2002	toxin-antitoxin pair type II binding
CP942_RS11585	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CP942_RS11590	COG2827	Endonuclease containing a URI domain
CP942_RS11595	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CP942_RS11600	COG4467	Involved in initiation control of chromosome replication
CP942_RS11605	COG1774	PSP1 C-terminal conserved region
CP942_RS11610	COG0470	DNA polymerase III
CP942_RS11615	COG1728	Protein conserved in bacteria
CP942_RS11620	COG3870	Protein conserved in bacteria
CP942_RS11625	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CP942_RS11630	COG1982	Orn Lys Arg decarboxylase major
CP942_RS11635	COG3853	Toxic anion resistance protein (TelA)
CP942_RS11640	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
CP942_RS11685	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CP942_RS11690	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CP942_RS11695	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CP942_RS11705	COG0590	tRNA wobble adenosine to inosine editing
CP942_RS11710	COG1335	isochorismatase
CP942_RS11715	COG3858	chitin binding
CP942_RS11715	COG1388	LysM domain
CP942_RS11720	COG1428	Deoxynucleoside kinase
CP942_RS11725	COG1428	Deoxynucleoside kinase
CP942_RS11740	COG3835	regulator
CP942_RS11745	COG2610	gluconate transmembrane transporter activity
CP942_RS11750	COG1929	Belongs to the glycerate kinase type-1 family
CP942_RS11755	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CP942_RS11760	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CP942_RS11765	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
CP942_RS11770	COG1686	Belongs to the peptidase S11 family
CP942_RS11775	COG0517	IMP dehydrogenase activity
CP942_RS11775	COG0516	GMP reductase activity
CP942_RS11810	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CP942_RS11815	COG0187	DNA topoisomerase II activity
CP942_RS11825	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CP942_RS11830	COG2501	S4 domain
CP942_RS11835	COG0592	DNA-directed DNA polymerase activity
CP942_RS11840	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CP942_RS11850	COG0594	ribonuclease P activity
CP942_RS11855	COG0706	membrane insertase activity
CP942_RS11860	COG1847	R3H domain protein
CP942_RS11865	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CP942_RS11870	COG0445	tRNA wobble uridine modification
CP942_RS11875	COG0357	Ribosomal RNA small subunit methyltransferase G
CP942_RS11880	COG1475	DNA binding
CP942_RS11885	COG1595	DNA-templated transcription, initiation
CP942_RS11890	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CP942_RS11895	COG1192	Involved in chromosome partitioning
CP942_RS11900	COG1475	DNA binding
CP942_RS11910	COG3949	Membrane
CP942_RS11915	COG4481	Protein conserved in bacteria
CP942_RS11920	COG0012	GTP binding
CP942_RS11925	COG0360	Binds together with S18 to 16S ribosomal RNA
CP942_RS11930	COG0629	single-stranded DNA binding
CP942_RS11935	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CP942_RS11940	COG2271	Major facilitator Superfamily
CP942_RS11945	COG0659	secondary active sulfate transmembrane transporter activity
CP942_RS11950	COG0589	response to stress
CP942_RS11955	COG5577	PFAM Coat F domain
CP942_RS11960	COG4241	membrane
CP942_RS11965	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CP942_RS11970	COG0359	binds to the 23S rRNA
CP942_RS11975	COG1263	PTS System
CP942_RS11975	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS11980	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CP942_RS11985	COG2188	Transcriptional regulator
CP942_RS11990	COG0363	glucosamine-6-phosphate deaminase activity
CP942_RS11995	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CP942_RS12000	COG2807	transmembrane transport
CP942_RS12005	COG3093	addiction module antidote protein HigA
CP942_RS12020	COG0305	Participates in initiation and elongation during chromosome replication
CP942_RS12030	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CP942_RS12035	COG1051	belongs to the nudix hydrolase family
CP942_RS12060	COG0745	RESPONSE REGULATOR receiver
CP942_RS12065	COG5002	protein histidine kinase activity
CP942_RS12070	COG4863	YycH protein
CP942_RS12075	COG4853	Protein conserved in bacteria
CP942_RS12080	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CP942_RS12085	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CP942_RS12100	COG0456	acetyltransferase
CP942_RS12115	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CP942_RS12145	COG2197	response regulator
CP942_RS12155	COG0842	Transport permease protein
CP942_RS12160	COG1131	(ABC) transporter
CP942_RS12175	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS12180	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS12185	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP942_RS12205	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
CP942_RS12225	COG1113	amino acid transport
CP942_RS12230	COG3634	alkyl hydroperoxide reductase activity
CP942_RS12235	COG0450	alkyl hydroperoxide reductase
CP942_RS12240	COG1454	alcohol dehydrogenase
CP942_RS12240	COG1012	belongs to the aldehyde dehydrogenase family
CP942_RS12270	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CP942_RS12280	COG1940	carbohydrate kinase activity
CP942_RS12285	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
CP942_RS12290	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CP942_RS12295	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CP942_RS12300	COG1609	Transcriptional regulator
CP942_RS12305	COG2182	Extracellular solute-binding protein
CP942_RS12310	COG1175	transmembrane transport
CP942_RS12315	COG3833	ABC-type maltose transport systems, permease component
CP942_RS12320	COG1874	Beta-galactosidase
CP942_RS12330	COG0686	Belongs to the AlaDH PNT family
CP942_RS12335	COG1115	amino acid carrier protein
CP942_RS12340	COG0840	transmembrane signaling receptor activity
CP942_RS12340	COG5278	phosphoserine phosphatase activity
CP942_RS12350	COG0745	RESPONSE REGULATOR receiver
CP942_RS12355	COG2205	protein histidine kinase activity
CP942_RS12360	COG1136	(ABC) transporter
CP942_RS12365	COG0577	efflux transmembrane transporter activity
CP942_RS12370	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
CP942_RS12400	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP942_RS12420	COG0561	phosphatase activity
CP942_RS12425	COG0488	(ABC) transporter
CP942_RS12430	COG0326	Molecular chaperone. Has ATPase activity
CP942_RS12435	COG2271	Major facilitator Superfamily
CP942_RS12440	COG0584	glycerophosphoryl diester phosphodiesterase
CP942_RS12445	COG0667	Aldo Keto reductase
CP942_RS12450	COG1349	DNA-binding transcription factor activity
CP942_RS12455	COG1012	belongs to the aldehyde dehydrogenase family
CP942_RS12460	COG3718	enzyme involved in inositol metabolism
CP942_RS12465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CP942_RS12470	COG3962	Belongs to the TPP enzyme family
CP942_RS12475	COG1082	Xylose isomerase domain protein TIM barrel
CP942_RS12480	COG2814	Major facilitator Superfamily
CP942_RS12485	COG0673	inositol 2-dehydrogenase activity
CP942_RS12490	COG1082	Xylose isomerase domain protein TIM barrel
CP942_RS12495	COG1082	Xylose isomerase domain protein TIM barrel
CP942_RS12500	COG0191	fructose-bisphosphate aldolase activity
CP942_RS12510	COG1181	Belongs to the D-alanine--D-alanine ligase family
CP942_RS12525	COG3977	Valine--pyruvate aminotransferase
CP942_RS12535	COG1215	transferase activity, transferring glycosyl groups
CP942_RS12540	COG5298	Protein conserved in bacteria
CP942_RS12545	COG3706	GGDEF domain
CP942_RS12550	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CP942_RS12555	COG2390	Transcriptional regulator
CP942_RS12560	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CP942_RS12565	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CP942_RS12570	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CP942_RS12585	COG0513	Belongs to the DEAD box helicase family
CP942_RS12590	COG3507	Belongs to the glycosyl hydrolase 43 family
CP942_RS12595	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CP942_RS12605	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS12605	COG2190	(PTS) system
CP942_RS12605	COG1263	PTS System
CP942_RS12610	COG2723	6-phospho-beta-galactosidase activity
CP942_RS12615	COG0745	RESPONSE REGULATOR receiver
CP942_RS12620	COG2205	protein histidine kinase activity
CP942_RS12625	COG1136	(ABC) transporter
CP942_RS12630	COG0577	efflux transmembrane transporter activity
CP942_RS12695	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CP942_RS12705	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CP942_RS12710	COG2224	Isocitrate lyase
CP942_RS12715	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CP942_RS12720	COG4721	ABC-type cobalt transport system, permease component
CP942_RS12725	COG1122	ATPase activity
CP942_RS12730	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CP942_RS12735	COG3711	transcriptional antiterminator
CP942_RS12740	COG1263	PTS System
CP942_RS12740	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS12740	COG2190	(PTS) system
CP942_RS12745	COG2723	6-phospho-beta-galactosidase activity
CP942_RS12755	COG0693	protein deglycase activity
CP942_RS12755	COG0753	catalase activity
CP942_RS12765	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CP942_RS12790	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CP942_RS12795	COG0463	Glycosyl transferase, family 2
CP942_RS12800	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CP942_RS12805	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CP942_RS12820	COG1609	Transcriptional regulator
CP942_RS12830	COG1175	transmembrane transport
CP942_RS12835	COG0395	ABC-type sugar transport system, permease component
CP942_RS12840	COG2223	nitrite transmembrane transporter activity
CP942_RS12855	COG2195	Cleaves the N-terminal amino acid of tripeptides
CP942_RS12865	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CP942_RS12870	COG2723	6-phospho-beta-galactosidase activity
CP942_RS12880	COG0549	Belongs to the carbamate kinase family
CP942_RS12890	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CP942_RS12895	COG2235	arginine
CP942_RS12915	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CP942_RS12925	COG1368	sulfuric ester hydrolase activity
CP942_RS12940	COG0584	glycerophosphoryl diester phosphodiesterase
CP942_RS12945	COG3493	citrate carrier protein
CP942_RS12950	COG1215	transferase activity, transferring glycosyl groups
CP942_RS12960	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP942_RS12965	COG0726	polysaccharide deacetylase
CP942_RS12980	COG5294	Protein conserved in bacteria
CP942_RS12985	COG0577	efflux transmembrane transporter activity
CP942_RS12990	COG1136	(ABC) transporter
CP942_RS13000	COG2205	protein histidine kinase activity
CP942_RS13005	COG0745	RESPONSE REGULATOR receiver
CP942_RS13010	COG2706	6-phosphogluconolactonase activity
CP942_RS13015	COG1396	sequence-specific DNA binding
CP942_RS13020	COG0252	asparaginase activity
CP942_RS13025	COG1027	Aspartate ammonia-lyase
CP942_RS13030	COG1757	Na H antiporter
CP942_RS13035	COG0281	malic enzyme
CP942_RS13045	COG2116	formate transmembrane transporter activity
CP942_RS13055	COG1271	oxidase subunit
CP942_RS13060	COG1294	oxidase, subunit
CP942_RS13065	COG4988	ABC transporter
CP942_RS13070	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CP942_RS13075	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CP942_RS13085	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CP942_RS13090	COG0735	belongs to the Fur family
CP942_RS13095	COG0753	catalase activity
CP942_RS13100	COG0753	catalase activity
CP942_RS13110	COG2814	Major facilitator Superfamily
CP942_RS13115	COG1595	DNA-templated transcription, initiation
CP942_RS13135	COG1131	(ABC) transporter
CP942_RS13140	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CP942_RS13145	COG2814	Major facilitator Superfamily
CP942_RS13160	COG2755	lipolytic protein G-D-S-L family
CP942_RS13165	COG1132	(ABC) transporter
CP942_RS13180	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CP942_RS13190	COG0372	Belongs to the citrate synthase family
CP942_RS13200	COG2094	Belongs to the DNA glycosylase MPG family
CP942_RS13205	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS13205	COG3711	transcriptional antiterminator
CP942_RS13210	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CP942_RS13215	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CP942_RS13220	COG1447	Phosphotransferase system cellobiose-specific component IIA
CP942_RS13225	COG1486	melibiose metabolic process
CP942_RS13230	COG2814	Major facilitator Superfamily
CP942_RS13235	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CP942_RS13240	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CP942_RS13245	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP942_RS13250	COG1696	Membrane protein involved in D-alanine export
CP942_RS13255	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS13270	COG2357	RelA SpoT domain protein
CP942_RS13280	COG0477	Major facilitator Superfamily
CP942_RS13285	COG2234	aminopeptidase activity
CP942_RS13295	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CP942_RS13300	COG0800	Aldolase
CP942_RS13305	COG4948	Mandelate Racemase Muconate Lactonizing
CP942_RS13310	COG2271	Major facilitator Superfamily
CP942_RS13315	COG5522	Integral membrane protein (intg_mem_TP0381)
CP942_RS13320	COG2409	Drug exporters of the RND superfamily
CP942_RS13325	COG2197	response regulator
CP942_RS13330	COG4585	Histidine kinase
CP942_RS13345	COG1442	glycosyl transferase family 8
CP942_RS13350	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CP942_RS13355	COG0346	lactoylglutathione lyase activity
CP942_RS13360	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CP942_RS13365	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CP942_RS13370	COG1346	cytolysis
CP942_RS13375	COG1380	Effector of murein hydrolase LrgA
CP942_RS13390	COG0583	DNA-binding transcription factor activity
CP942_RS13395	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CP942_RS13400	COG0352	thiamine-phosphate diphosphorylase activity
CP942_RS13405	COG1940	carbohydrate kinase activity
CP942_RS13410	COG2115	Belongs to the xylose isomerase family
CP942_RS13415	COG1070	Carbohydrate kinase
CP942_RS13420	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CP942_RS13425	COG3162	membrane
CP942_RS13430	COG0655	NAD(P)H dehydrogenase (quinone) activity
CP942_RS13445	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CP942_RS13450	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CP942_RS13455	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CP942_RS13465	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CP942_RS13500	COG0456	acetyltransferase
CP942_RS13520	COG3314	Sporulation integral membrane protein YlbJ
CP942_RS13525	COG0772	Belongs to the SEDS family
CP942_RS13530	COG0772	Belongs to the SEDS family
CP942_RS13535	COG1473	amidohydrolase
CP942_RS13540	COG0778	Nitroreductase
CP942_RS13545	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP942_RS13555	COG1404	Belongs to the peptidase S8 family
CP942_RS13565	COG3711	transcriptional antiterminator
CP942_RS13570	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS13570	COG1263	PTS System
CP942_RS13575	COG1621	beta-fructofuranosidase activity
CP942_RS13585	COG0351	phosphomethylpyrimidine kinase
CP942_RS13590	COG1216	Glycosyl transferase, family 2
CP942_RS13595	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CP942_RS13600	COG1012	belongs to the aldehyde dehydrogenase family
CP942_RS13610	COG2233	PERMEase
CP942_RS13615	COG2363	Small membrane protein
CP942_RS13630	COG1131	(ABC) transporter
CP942_RS13650	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CP942_RS13665	COG3253	May function as heme-dependent peroxidase
CP942_RS13670	COG0280	phosphate acetyltransferase
CP942_RS13680	COG1414	Transcriptional regulator
CP942_RS13705	COG2814	Major facilitator Superfamily
CP942_RS13730	COG4844	belongs to the
CP942_RS13735	COG1078	dGTPase activity
CP942_RS13740	COG3465	dGTPase activity
CP942_RS13750	COG1942	4-Oxalocrotonate Tautomerase
CP942_RS13755	COG1994	Peptidase M50
CP942_RS13765	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CP942_RS13770	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CP942_RS13775	COG0010	Belongs to the arginase family
CP942_RS13780	COG4506	Protein conserved in bacteria
CP942_RS13785	COG0018	arginyl-trna synthetase
CP942_RS13795	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CP942_RS13800	COG2181	nitrate reductase activity
CP942_RS13800	COG0247	lactate metabolic process
CP942_RS13805	COG0183	Belongs to the thiolase family
CP942_RS13810	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP942_RS13815	COG1960	acyl-CoA dehydrogenase activity
CP942_RS13820	COG1960	acyl-CoA dehydrogenase activity
CP942_RS13825	COG3343	RNA polymerase activity
CP942_RS13830	COG0504	CTP synthase activity
CP942_RS13835	COG4821	SIS domain
CP942_RS13840	COG2204	response regulator
CP942_RS13845	COG0191	fructose-bisphosphate aldolase activity
CP942_RS13850	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CP942_RS13855	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CP942_RS13860	COG1494	fructose-1,6-bisphosphatase
CP942_RS13865	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CP942_RS13870	COG0254	rRNA binding
CP942_RS13875	COG1435	thymidine kinase activity
CP942_RS13880	COG0281	malic enzyme
CP942_RS13885	COG0679	Auxin Efflux Carrier
CP942_RS13890	COG0789	Transcriptional regulator
CP942_RS13895	COG0346	lactoylglutathione lyase activity
CP942_RS13900	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CP942_RS13905	COG2890	protein-(glutamine-N5) methyltransferase activity
CP942_RS13920	COG1609	Transcriptional regulator
CP942_RS13925	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CP942_RS13930	COG0561	phosphatase activity
CP942_RS13935	COG0673	inositol 2-dehydrogenase activity
CP942_RS13940	COG0738	Major facilitator superfamily
CP942_RS13950	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CP942_RS13955	COG0009	L-threonylcarbamoyladenylate synthase
CP942_RS13960	COG1971	Probably functions as a manganese efflux pump
CP942_RS13965	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CP942_RS13970	COG0698	ribose 5-phosphate isomerase
CP942_RS13975	COG4475	Protein of unknown function (DUF436)
CP942_RS13980	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CP942_RS13985	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CP942_RS14000	COG0356	it plays a direct role in the translocation of protons across the membrane
CP942_RS14010	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CP942_RS14015	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CP942_RS14020	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CP942_RS14025	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CP942_RS14030	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CP942_RS14035	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CP942_RS14040	COG4836	Membrane
CP942_RS14050	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CP942_RS14055	COG2385	sporulation resulting in formation of a cellular spore
CP942_RS14060	COG2304	oxidoreductase activity
CP942_RS14065	COG2304	oxidoreductase activity
CP942_RS14070	COG3383	formate dehydrogenase (NAD+) activity
CP942_RS14075	COG2223	nitrite transmembrane transporter activity
CP942_RS14080	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CP942_RS14085	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CP942_RS14095	COG1959	2 iron, 2 sulfur cluster binding
CP942_RS14100	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP942_RS14115	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP942_RS14115	COG2207	Transcriptional regulator
CP942_RS14120	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP942_RS14125	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS14130	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS14135	COG2819	hydrolase of the alpha beta superfamily
CP942_RS14140	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS14145	COG1169	isochorismate synthase
CP942_RS14150	COG1021	2,3-dihydroxybenzoate-AMP ligase
CP942_RS14155	COG3433	isochorismatase activity
CP942_RS14155	COG1535	isochorismatase
CP942_RS14160	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP942_RS14165	COG3251	PFAM MbtH domain protein
CP942_RS14170	COG0477	Major facilitator Superfamily
CP942_RS14175	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CP942_RS14185	COG1247	-acetyltransferase
CP942_RS14190	COG0739	heme binding
CP942_RS14200	COG0740	serine-type endopeptidase activity
CP942_RS14205	COG0347	Belongs to the P(II) protein family
CP942_RS14210	COG0004	ammonium transporteR
CP942_RS14215	COG1253	flavin adenine dinucleotide binding
CP942_RS14220	COG0598	Magnesium transport protein CorA
CP942_RS14225	COG0517	IMP dehydrogenase activity
CP942_RS14240	COG3361	conserved protein (COG2071)
CP942_RS14245	COG3546	catalase activity
CP942_RS14250	COG1227	inorganic diphosphatase activity
CP942_RS14255	COG0671	phosphoesterase, PA-phosphatase related
CP942_RS14260	COG2814	Major facilitator Superfamily
CP942_RS14265	COG1846	Transcriptional regulator
CP942_RS14275	COG1609	Transcriptional regulator
CP942_RS14280	COG1077	Cell shape determining protein MreB Mrl
CP942_RS14285	COG4786	Flagellar basal body rod
CP942_RS14290	COG4786	Flagellar basal body rod
CP942_RS14295	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CP942_RS14300	COG1970	mechanosensitive ion channel activity
CP942_RS14315	COG0629	single-stranded DNA binding
CP942_RS14335	COG3732	PTS system glucitol sorbitol-specific
CP942_RS14345	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS14355	COG1349	DNA-binding transcription factor activity
CP942_RS14360	COG0561	phosphatase activity
CP942_RS14380	COG3878	Protein conserved in bacteria
CP942_RS14385	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CP942_RS14390	COG4715	Zinc finger, swim domain protein
CP942_RS14400	COG3944	biosynthesis protein
CP942_RS14405	COG4464	protein tyrosine phosphatase activity
CP942_RS14410	COG2059	Chromate
CP942_RS14415	COG2059	Chromate
CP942_RS14420	COG1522	sequence-specific DNA binding
CP942_RS14425	COG0405	Gamma-glutamyltransferase
CP942_RS14430	COG0583	DNA-binding transcription factor activity
CP942_RS14435	COG0028	Belongs to the TPP enzyme family
CP942_RS14440	COG3527	Alpha-acetolactate decarboxylase
CP942_RS14445	COG2226	methyltransferase
CP942_RS14450	COG0583	DNA-binding transcription factor activity
CP942_RS14455	COG1879	ABC-type sugar transport system periplasmic component
CP942_RS14460	COG1172	Belongs to the binding-protein-dependent transport system permease family
CP942_RS14465	COG1129	ABC transporter
CP942_RS14470	COG1869	D-ribose catabolic process
CP942_RS14475	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CP942_RS14480	COG1609	Transcriptional regulator
CP942_RS14485	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CP942_RS14495	COG2843	Capsule synthesis protein
CP942_RS14500	COG0791	NLP P60 protein
CP942_RS14505	COG0561	phosphatase activity
CP942_RS14510	COG1316	TRANSCRIPTIONal
CP942_RS14515	COG2814	Major facilitator Superfamily
CP942_RS14520	COG1063	alcohol dehydrogenase
CP942_RS14525	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS14530	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
CP942_RS14535	COG1609	Transcriptional regulator
CP942_RS14540	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CP942_RS14545	COG0800	Aldolase
CP942_RS14565	COG1482	cell wall glycoprotein biosynthetic process
CP942_RS14570	COG4193	domain, Protein
CP942_RS14575	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CP942_RS14580	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
CP942_RS14585	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CP942_RS14590	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CP942_RS14620	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CP942_RS14635	COG1682	transport, permease protein
CP942_RS14640	COG1134	teichoic acid transport
CP942_RS14645	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CP942_RS14650	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CP942_RS14655	COG1316	TRANSCRIPTIONal
CP942_RS14680	COG2244	polysaccharide biosynthetic process
CP942_RS14685	COG0438	transferase activity, transferring glycosyl groups
CP942_RS14685	COG0297	glycogen (starch) synthase activity
CP942_RS14690	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CP942_RS14695	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CP942_RS14700	COG3307	-O-antigen
CP942_RS14705	COG3206	protein involved in exopolysaccharide biosynthesis
CP942_RS14710	COG1215	transferase activity, transferring glycosyl groups
CP942_RS14715	COG0438	transferase activity, transferring glycosyl groups
CP942_RS14720	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CP942_RS14735	COG1739	Uncharacterized protein family UPF0029
CP942_RS14740	COG4585	Histidine kinase
CP942_RS14745	COG2197	response regulator
CP942_RS14750	COG1307	EDD domain protein, DegV family
CP942_RS14755	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CP942_RS14765	COG1040	competence protein
CP942_RS14775	COG2747	anti-sigma28 factor FlgM
CP942_RS14780	COG3418	PFAM FlgN family protein
CP942_RS14785	COG1256	bacterial-type flagellum assembly
CP942_RS14785	COG4786	Flagellar basal body rod
CP942_RS14790	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CP942_RS14800	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
CP942_RS14805	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CP942_RS14810	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CP942_RS14820	COG1334	flagellar protein FlaG
CP942_RS14825	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CP942_RS14830	COG1516	flagellar protein fliS
CP942_RS14845	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CP942_RS14850	COG0653	protein targeting
CP942_RS14860	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CP942_RS14865	COG2010	Cytochrome c
CP942_RS14875	COG2884	Cell division ATP-binding protein ftsE
CP942_RS14880	COG2177	Part of the ABC transporter FtsEX involved in
CP942_RS14885	COG3883	PFAM NLP P60 protein
CP942_RS14885	COG0791	NLP P60 protein
CP942_RS14890	COG0473	3-isopropylmalate dehydrogenase activity
CP942_RS14895	COG3409	Peptidoglycan-binding domain 1 protein
CP942_RS14895	COG0793	Belongs to the peptidase S41A family
CP942_RS14905	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CP942_RS14915	COG4897	Protein conserved in bacteria
CP942_RS14920	COG0556	nucleotide-excision repair
CP942_RS14925	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CP942_RS14945	COG3595	metallopeptidase activity
CP942_RS14950	COG1983	PspC domain protein
CP942_RS14955	COG1950	PFAM Membrane protein of
CP942_RS14960	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CP942_RS14965	COG2814	Major facilitator Superfamily
CP942_RS14970	COG1846	Transcriptional regulator
CP942_RS14975	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CP942_RS14980	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CP942_RS14985	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CP942_RS14990	COG0546	phosphoglycolate phosphatase activity
CP942_RS14995	COG0110	maltose O-acetyltransferase activity
CP942_RS15000	COG5297	Belongs to the glycosyl hydrolase family 6
CP942_RS15005	COG4990	cell redox homeostasis
CP942_RS15010	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CP942_RS15015	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CP942_RS15020	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CP942_RS15025	COG0131	Imidazoleglycerol-phosphate dehydratase
CP942_RS15030	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CP942_RS15035	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CP942_RS15040	COG0107	imidazoleglycerol-phosphate synthase activity
CP942_RS15045	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CP942_RS15045	COG0140	phosphoribosyl-ATP diphosphatase activity
CP942_RS15050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP942_RS15055	COG0457	Tetratricopeptide repeat
CP942_RS15060	COG0492	ferredoxin-NADP+ reductase activity
CP942_RS15070	COG1051	belongs to the nudix hydrolase family
CP942_RS15075	COG1660	Displays ATPase and GTPase activities
CP942_RS15080	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CP942_RS15085	COG1481	regulation of sporulation
CP942_RS15090	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS15095	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CP942_RS15100	COG2732	(Barnase) inhibitor
CP942_RS15115	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CP942_RS15120	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CP942_RS15125	COG0288	reversible hydration of carbon dioxide
CP942_RS15130	COG0659	secondary active sulfate transmembrane transporter activity
CP942_RS15135	COG1078	dGTPase activity
CP942_RS15140	COG1694	Mazg nucleotide pyrophosphohydrolase
CP942_RS15145	COG1611	Belongs to the LOG family
CP942_RS15155	COG2801	Transposase and inactivated derivatives
CP942_RS15160	COG0740	serine-type endopeptidase activity
CP942_RS15175	COG1621	beta-fructofuranosidase activity
CP942_RS15180	COG1621	beta-fructofuranosidase activity
CP942_RS15185	COG1902	pentaerythritol trinitrate reductase activity
CP942_RS15190	COG1733	regulation of RNA biosynthetic process
CP942_RS15200	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CP942_RS15205	COG1454	alcohol dehydrogenase
CP942_RS15215	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CP942_RS15225	COG2271	Major facilitator Superfamily
CP942_RS15230	COG2249	NAD(P)H dehydrogenase (quinone) activity
CP942_RS15235	COG1396	sequence-specific DNA binding
CP942_RS15240	COG3944	biosynthesis protein
CP942_RS15245	COG0489	protein tyrosine kinase activity
CP942_RS15250	COG1086	Polysaccharide biosynthesis protein
CP942_RS15255	COG0438	transferase activity, transferring glycosyl groups
CP942_RS15260	COG1215	transferase activity, transferring glycosyl groups
CP942_RS15265	COG0438	transferase activity, transferring glycosyl groups
CP942_RS15275	COG1216	Glycosyl transferase, family 2
CP942_RS15280	COG5039	Polysaccharide pyruvyl transferase
CP942_RS15285	COG1216	Glycosyl transferase, family 2
CP942_RS15290	COG2244	polysaccharide biosynthetic process
CP942_RS15295	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CP942_RS15300	COG0110	maltose O-acetyltransferase activity
CP942_RS15305	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CP942_RS15310	COG5039	Polysaccharide pyruvyl transferase
CP942_RS15320	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CP942_RS15325	COG1620	l-lactate permease
CP942_RS15330	COG2186	Transcriptional regulator
CP942_RS15335	COG0247	lactate metabolic process
CP942_RS15340	COG1139	Iron-sulfur cluster binding protein
CP942_RS15345	COG1556	Lactate utilization protein
CP942_RS15365	COG1113	amino acid transport
CP942_RS15370	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP942_RS15375	COG2390	Transcriptional regulator
CP942_RS15380	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CP942_RS15390	COG0126	phosphoglycerate kinase activity
CP942_RS15395	COG0149	triose-phosphate isomerase activity
CP942_RS15405	COG0148	phosphopyruvate hydratase activity
CP942_RS15410	COG0693	protein deglycase activity
CP942_RS15430	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP942_RS15435	COG4640	response to antibiotic
CP942_RS15445	COG3064	Membrane
CP942_RS15450	COG2095	MarC family integral membrane protein
CP942_RS15455	COG1510	regulation of RNA biosynthetic process
CP942_RS15460	COG1125	glycine betaine transport
CP942_RS15460	COG0517	IMP dehydrogenase activity
CP942_RS15465	COG1174	glycine betaine transport
CP942_RS15470	COG1732	Glycine betaine
CP942_RS15475	COG1174	glycine betaine transport
CP942_RS15485	COG1131	(ABC) transporter
CP942_RS15495	COG1396	sequence-specific DNA binding
CP942_RS15500	COG1396	sequence-specific DNA binding
CP942_RS15505	COG1476	TRANSCRIPTIONal
CP942_RS15510	COG2002	toxin-antitoxin pair type II binding
CP942_RS15515	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CP942_RS15520	COG1647	Serine aminopeptidase, S33
CP942_RS15525	COG0557	exoribonuclease II activity
CP942_RS15530	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CP942_RS15560	COG3507	Belongs to the glycosyl hydrolase 43 family
CP942_RS15565	COG5520	Belongs to the glycosyl hydrolase 30 family
CP942_RS15585	COG2140	Oxalate decarboxylase
CP942_RS15595	COG1191	sigma factor activity
CP942_RS15605	COG1054	Belongs to the UPF0176 family
CP942_RS15610	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CP942_RS15615	COG0673	inositol 2-dehydrogenase activity
CP942_RS15625	COG1846	Transcriptional regulator
CP942_RS15635	COG2124	cytochrome p450
CP942_RS15645	COG2814	Major facilitator Superfamily
CP942_RS15650	COG2814	Major facilitator Superfamily
CP942_RS15660	COG3347	Dehydrogenase
CP942_RS15660	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS15670	COG4952	isomerase
CP942_RS15675	COG1070	Carbohydrate kinase
CP942_RS15680	COG1349	DNA-binding transcription factor activity
CP942_RS15685	COG0693	protein deglycase activity
CP942_RS15690	COG1937	Protein conserved in bacteria
CP942_RS15695	COG2608	mercury ion transmembrane transporter activity
CP942_RS15700	COG2217	Heavy metal translocating P-type atpase
CP942_RS15710	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS15715	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS15715	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CP942_RS15715	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CP942_RS15735	COG0803	Belongs to the bacterial solute-binding protein 9 family
CP942_RS15740	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CP942_RS15745	COG1121	(ABC) transporter
CP942_RS15750	COG1472	Belongs to the glycosyl hydrolase 3 family
CP942_RS15755	COG1501	Belongs to the glycosyl hydrolase 31 family
CP942_RS15760	COG0395	ABC-type sugar transport system, permease component
CP942_RS15765	COG1175	transmembrane transport
CP942_RS15770	COG1653	transport
CP942_RS15775	COG2217	Heavy metal translocating P-type atpase
CP942_RS15780	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CP942_RS15785	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CP942_RS15790	COG0456	acetyltransferase
CP942_RS15800	COG2860	membrane
CP942_RS15805	COG3973	AAA domain
CP942_RS15810	COG0596	Alpha beta hydrolase
CP942_RS15820	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CP942_RS15825	COG1940	carbohydrate kinase activity
CP942_RS15830	COG0656	L-ascorbic acid biosynthetic process
CP942_RS15835	COG2814	Major facilitator Superfamily
CP942_RS15840	COG1368	sulfuric ester hydrolase activity
CP942_RS15845	COG1988	membrane-bound metal-dependent
CP942_RS15855	COG0531	amino acid
CP942_RS15860	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS15865	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS15870	COG1120	ATPase activity
CP942_RS15875	COG0745	RESPONSE REGULATOR receiver
CP942_RS15880	COG2205	protein histidine kinase activity
CP942_RS15885	COG1904	glucuronate isomerase
CP942_RS15890	COG2211	Major facilitator Superfamily
CP942_RS15895	COG1609	Transcriptional regulator
CP942_RS15900	COG0246	Mannitol dehydrogenase
CP942_RS15905	COG2721	sulfolactate sulfo-lyase activity
CP942_RS15915	COG0583	DNA-binding transcription factor activity
CP942_RS15920	COG2258	MOSC domain
CP942_RS15925	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS15930	COG1802	Transcriptional regulator
CP942_RS15935	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP942_RS15945	COG1120	ATPase activity
CP942_RS15950	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CP942_RS15955	COG1454	alcohol dehydrogenase
CP942_RS15975	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS15980	COG2096	Adenosyltransferase
CP942_RS15985	COG4677	pectinesterase activity
CP942_RS15990	COG4758	membrane
CP942_RS15995	COG1842	Phage shock protein A
CP942_RS16000	COG3595	metallopeptidase activity
CP942_RS16005	COG4758	membrane
CP942_RS16010	COG4585	Histidine kinase
CP942_RS16015	COG2197	response regulator
CP942_RS16030	COG0814	amino acid
CP942_RS16035	COG0697	spore germination
CP942_RS16045	COG0114	fumarate hydratase activity
CP942_RS16050	COG1309	transcriptional regulator
CP942_RS16055	COG2770	Histidine kinase
CP942_RS16055	COG2205	protein histidine kinase activity
CP942_RS16060	COG0745	RESPONSE REGULATOR receiver
CP942_RS16070	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CP942_RS16075	COG0783	Belongs to the Dps family
CP942_RS16080	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS16085	COG1686	Belongs to the peptidase S11 family
CP942_RS16100	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP942_RS16105	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS16110	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP942_RS16115	COG1120	ATPase activity
CP942_RS16130	COG5577	PFAM Coat F domain
CP942_RS16145	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP942_RS16145	COG1024	Enoyl-CoA hydratase
CP942_RS16150	COG0183	Belongs to the thiolase family
CP942_RS16155	COG1960	acyl-CoA dehydrogenase activity
CP942_RS16160	COG1393	Belongs to the ArsC family
CP942_RS16165	COG0509	glycine decarboxylation via glycine cleavage system
CP942_RS16175	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CP942_RS16180	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CP942_RS16190	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CP942_RS16195	COG2011	ABC-type metal ion transport system permease component
CP942_RS16200	COG1464	Belongs to the NlpA lipoprotein family
CP942_RS16205	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CP942_RS16215	COG0396	ATPase activity
CP942_RS16220	COG0719	Fe-S assembly protein
CP942_RS16225	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CP942_RS16230	COG0822	iron-sulfur transferase activity
CP942_RS16235	COG0719	Fe-S assembly protein
CP942_RS16255	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CP942_RS16265	COG2356	endonuclease I
CP942_RS16280	COG1288	antiporter activity
CP942_RS16285	COG2814	Major facilitator Superfamily
CP942_RS16290	COG2508	Transcriptional regulator
CP942_RS16295	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CP942_RS16300	COG3226	Transcriptional regulator
CP942_RS16310	COG1801	Protein of unknown function DUF72
CP942_RS16315	COG0730	response to heat
CP942_RS16320	COG0737	Belongs to the 5'-nucleotidase family
CP942_RS16325	COG3377	Domain of unknown function (DUF1805)
CP942_RS16335	COG0733	neurotransmitter:sodium symporter activity
CP942_RS16345	COG0739	heme binding
CP942_RS16360	COG4470	Protein conserved in bacteria
CP942_RS16365	COG2445	Protein of unknown function DUF86
CP942_RS16370	COG0647	UMP catabolic process
CP942_RS16375	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CP942_RS16380	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CP942_RS16385	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CP942_RS16390	COG0460	homoserine dehydrogenase
CP942_RS16395	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CP942_RS16400	COG0083	homoserine kinase activity
CP942_RS16405	COG1506	peptidase
CP942_RS16405	COG0823	Involved in the tonB-independent uptake of proteins
CP942_RS16405	COG4946	Tricorn protease homolog
CP942_RS16410	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CP942_RS16415	COG4837	Protein of unknown function (DUF1462)
CP942_RS16425	COG3479	Phenolic acid decarboxylase
CP942_RS16430	COG0457	Tetratricopeptide repeat
CP942_RS16445	COG5646	InterPro IPR014922
CP942_RS16450	COG1252	NADH dehydrogenase
CP942_RS16455	COG4844	belongs to the
CP942_RS16460	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CP942_RS16465	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CP942_RS16470	COG0316	Belongs to the HesB IscA family
CP942_RS16475	COG0454	-acetyltransferase
CP942_RS16490	COG0492	ferredoxin-NADP+ reductase activity
CP942_RS16495	COG1252	NADH dehydrogenase
CP942_RS16505	COG3584	3D domain protein
CP942_RS16510	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CP942_RS16515	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CP942_RS16520	COG2056	Na+-H+ antiporter family
CP942_RS16525	COG1268	BioY protein
CP942_RS16530	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CP942_RS16540	COG0686	Belongs to the AlaDH PNT family
CP942_RS16545	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
CP942_RS16545	COG2508	Transcriptional regulator
CP942_RS16550	COG1115	amino acid carrier protein
CP942_RS16555	COG4842	Belongs to the WXG100 family
CP942_RS16560	COG5417	Belongs to the EsaB family
CP942_RS16565	COG4499	WXG100 protein secretion system (Wss), protein YukC
CP942_RS16570	COG1674	ftsk spoiiie
CP942_RS16570	COG0433	COG0433 Predicted ATPase
CP942_RS16575	COG1511	domain protein
CP942_RS16590	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS16595	COG1418	mRNA catabolic process
CP942_RS16605	COG0657	acetylesterase activity
CP942_RS16610	COG1959	2 iron, 2 sulfur cluster binding
CP942_RS16615	COG0628	permease
CP942_RS16630	COG5506	Protein of unknown function (DUF1694)
CP942_RS16635	COG1335	isochorismatase
CP942_RS16640	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CP942_RS16645	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
CP942_RS16675	COG4585	Histidine kinase
CP942_RS16680	COG2197	response regulator
CP942_RS16685	COG2050	protein possibly involved in aromatic compounds catabolism
CP942_RS16690	COG1320	monovalent cation:proton antiporter activity
CP942_RS16695	COG2212	antiporter activity
CP942_RS16700	COG1863	multisubunit Na H antiporter MnhE subunit
CP942_RS16705	COG0651	ATP synthesis coupled electron transport
CP942_RS16710	COG1006	Multisubunit Na H antiporter MnhC subunit
CP942_RS16715	COG2111	Na H antiporter
CP942_RS16720	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CP942_RS16720	COG2111	Na H antiporter
CP942_RS16730	COG3493	citrate carrier protein
CP942_RS16735	COG0688	phosphatidylethanolamine metabolic process
CP942_RS16740	COG0586	Pfam SNARE associated Golgi protein
CP942_RS16745	COG1183	phosphatidylcholine synthase activity
CP942_RS16750	COG1079	Belongs to the binding-protein-dependent transport system permease family
CP942_RS16755	COG4565	transcriptional regulatory protein
CP942_RS16760	COG3290	protein histidine kinase activity
CP942_RS16770	COG3011	Protein conserved in bacteria
CP942_RS16775	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CP942_RS16780	COG2814	Major facilitator Superfamily
CP942_RS16785	COG5018	Exonuclease
CP942_RS16800	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CP942_RS16815	COG2267	carboxylic ester hydrolase activity
CP942_RS16820	COG1522	sequence-specific DNA binding
CP942_RS16825	COG0436	Aminotransferase
CP942_RS16830	COG1098	S1 RNA binding domain
CP942_RS16835	COG2155	Conserved Protein
CP942_RS16840	COG1979	alcohol dehydrogenase
CP942_RS16845	COG0166	Belongs to the GPI family
CP942_RS16860	COG1396	sequence-specific DNA binding
CP942_RS16965	COG1802	Transcriptional regulator
CP942_RS16965	COG4626	Terminase
CP942_RS17040	COG1388	LysM domain
CP942_RS17040	COG1705	Flagellar rod assembly protein muramidase FlgJ
CP942_RS17045	COG5434	Belongs to the glycosyl hydrolase 28 family
CP942_RS17085	COG5444	nuclease activity
CP942_RS17115	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
CP942_RS17120	COG2323	membrane
CP942_RS17130	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CP942_RS17145	COG2738	Putative neutral zinc metallopeptidase
CP942_RS17150	COG1253	flavin adenine dinucleotide binding
CP942_RS17155	COG5297	Belongs to the glycosyl hydrolase family 6
CP942_RS17170	COG0366	Alpha amylase catalytic
CP942_RS17175	COG0432	Pfam Uncharacterised protein family UPF0047
CP942_RS17180	COG2070	2-Nitropropane dioxygenase
CP942_RS17190	COG0840	transmembrane signaling receptor activity
CP942_RS17195	COG0840	transmembrane signaling receptor activity
CP942_RS17200	COG0840	transmembrane signaling receptor activity
CP942_RS17205	COG0693	protein deglycase activity
CP942_RS17210	COG0673	inositol 2-dehydrogenase activity
CP942_RS17215	COG0628	permease
CP942_RS17220	COG1968	undecaprenyl-diphosphatase activity
CP942_RS17225	COG1408	metallophosphoesterase
CP942_RS17230	COG0726	polysaccharide deacetylase
CP942_RS17235	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CP942_RS17245	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
CP942_RS17290	COG1397	ADP-ribosylglycohydrolase
CP942_RS17300	COG2140	Oxalate decarboxylase
CP942_RS17305	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CP942_RS17310	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CP942_RS17320	COG1510	regulation of RNA biosynthetic process
CP942_RS17325	COG1012	belongs to the aldehyde dehydrogenase family
CP942_RS17330	COG1454	alcohol dehydrogenase
CP942_RS17340	COG2318	DinB family
CP942_RS17350	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CP942_RS17355	COG0569	domain protein
CP942_RS17360	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CP942_RS17380	COG3764	Sortase (surface protein transpeptidase)
CP942_RS17385	COG3859	Proton-coupled thiamine transporter YuaJ
CP942_RS17390	COG1609	Transcriptional regulator
CP942_RS17515	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CP942_RS17520	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CP942_RS17525	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CP942_RS17530	COG0297	glycogen (starch) synthase activity
CP942_RS17535	COG0058	SHG alpha-glucan phosphorylase activity
CP942_RS17540	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CP942_RS17545	COG1575	Belongs to the MenA family. Type 1 subfamily
CP942_RS17550	COG1169	isochorismate synthase
CP942_RS17555	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
CP942_RS17560	COG0596	Alpha beta hydrolase
CP942_RS17565	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CP942_RS17570	COG0318	PFAM AMP-dependent synthetase and ligase
CP942_RS17590	COG1294	oxidase, subunit
CP942_RS17600	COG0254	rRNA binding
CP942_RS17605	COG0803	Belongs to the bacterial solute-binding protein 9 family
CP942_RS17610	COG0523	cobalamin synthesis protein
CP942_RS17615	COG0288	reversible hydration of carbon dioxide
CP942_RS17620	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CP942_RS17625	COG1854	S-ribosylhomocysteine lyase activity
CP942_RS17640	COG0783	Belongs to the Dps family
CP942_RS17645	COG4824	toxin secretion phage lysis holin
CP942_RS17655	COG0494	nUDIX hydrolase
CP942_RS17660	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CP942_RS17665	COG1116	anion transmembrane transporter activity
CP942_RS17670	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CP942_RS17675	COG1506	peptidase
CP942_RS17690	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
CP942_RS17695	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CP942_RS17700	COG0367	asparagine synthase
CP942_RS17705	COG0438	transferase activity, transferring glycosyl groups
CP942_RS17705	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CP942_RS17710	COG0671	phosphoesterase, PA-phosphatase related
CP942_RS17715	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CP942_RS17720	COG2267	carboxylic ester hydrolase activity
CP942_RS17730	COG1301	dicarboxylic acid transport
CP942_RS17735	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CP942_RS17740	COG1242	4 iron, 4 sulfur cluster binding
CP942_RS17750	COG1725	Transcriptional regulator
CP942_RS17755	COG1131	(ABC) transporter
CP942_RS17765	COG1136	(ABC) transporter
CP942_RS17770	COG0577	efflux transmembrane transporter activity
CP942_RS17775	COG2433	Pfam Transposase IS66
CP942_RS17780	COG1464	Belongs to the NlpA lipoprotein family
CP942_RS17785	COG2814	Major facilitator Superfamily
CP942_RS17795	COG0495	leucyl-tRNA aminoacylation
CP942_RS17800	COG0346	lactoylglutathione lyase activity
CP942_RS17805	COG0583	DNA-binding transcription factor activity
CP942_RS17815	COG1073	alpha beta
CP942_RS17820	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CP942_RS17825	COG0395	ABC-type sugar transport system, permease component
CP942_RS17830	COG1653	transport
CP942_RS17835	COG2207	Transcriptional regulator
CP942_RS17840	COG4209	transmembrane transport
CP942_RS17845	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CP942_RS17850	COG1653	transport
CP942_RS17855	COG0673	inositol 2-dehydrogenase activity
CP942_RS17860	COG5578	integral membrane protein
CP942_RS17875	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CP942_RS17885	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CP942_RS17890	COG2081	HI0933 family
CP942_RS17895	COG2244	polysaccharide biosynthetic process
CP942_RS17900	COG1187	pseudouridine synthase activity
CP942_RS17905	COG1349	DNA-binding transcription factor activity
CP942_RS17910	COG1131	(ABC) transporter
CP942_RS17915	COG4473	ABC transporter
CP942_RS17920	COG2252	PERMEase
CP942_RS17925	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CP942_RS17940	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP942_RS17945	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CP942_RS17955	COG1597	lipid kinase activity
CP942_RS17960	COG1523	belongs to the glycosyl hydrolase 13 family
CP942_RS17965	COG0510	thiamine kinase activity
CP942_RS17975	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CP942_RS17980	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP942_RS17985	COG0281	malic enzyme
CP942_RS17990	COG5584	Small secreted protein
CP942_RS17995	COG1363	Peptidase, m42
CP942_RS18005	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CP942_RS18010	COG4848	Belongs to the UPF0354 family
CP942_RS18015	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CP942_RS18020	COG1674	ftsk spoiiie
CP942_RS18025	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CP942_RS18030	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CP942_RS18035	COG4980	gas vesicle protein
CP942_RS18040	COG3118	belongs to the thioredoxin family
CP942_RS18050	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CP942_RS18050	COG1605	Chorismate mutase
CP942_RS18055	COG1609	Transcriptional regulator
CP942_RS18060	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CP942_RS18070	COG0123	including yeast histone deacetylase and acetoin utilization protein
CP942_RS18075	COG0517	IMP dehydrogenase activity
CP942_RS18080	COG0454	-acetyltransferase
CP942_RS18085	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CP942_RS18090	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CP942_RS18095	COG3152	Membrane
CP942_RS18105	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CP942_RS18110	COG2199	diguanylate cyclase activity
CP942_RS18110	COG2203	Gaf domain
CP942_RS18115	COG1956	GAF domain-containing protein
CP942_RS18120	COG1309	transcriptional regulator
CP942_RS18125	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CP942_RS18130	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CP942_RS18135	COG1114	Component of the transport system for branched-chain amino acids
CP942_RS18140	COG1104	cysteine desulfurase activity
CP942_RS18145	COG0301	tRNA thio-modification
CP942_RS18155	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CP942_RS18160	COG1846	Transcriptional regulator
CP942_RS18165	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CP942_RS18170	COG0616	signal peptide processing
CP942_RS18175	COG1714	RDD family
CP942_RS18185	COG3874	Sporulation protein YtfJ
CP942_RS18190	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CP942_RS18195	COG0827	DNA restriction-modification system
CP942_RS18200	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CP942_RS18205	COG0521	Mo-molybdopterin cofactor biosynthetic process
CP942_RS18210	COG0137	argininosuccinate synthase activity
CP942_RS18215	COG0165	Argininosuccinate lyase
CP942_RS18220	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS18225	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CP942_RS18230	COG1695	Transcriptional regulator
CP942_RS18235	COG4109	DRTGG domain
CP942_RS18245	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CP942_RS18265	COG0587	DNA-directed DNA polymerase activity
CP942_RS18270	COG0281	malic enzyme
CP942_RS18275	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CP942_RS18280	COG0825	malonyl-CoA metabolic process
CP942_RS18285	COG0205	6-phosphofructokinase activity
CP942_RS18295	COG3030	protein affecting phage T7 exclusion by the F plasmid
CP942_RS18300	COG0628	permease
CP942_RS18305	COG2707	UPF0756 membrane protein
CP942_RS18315	COG2273	Hydrolase Family 16
CP942_RS18325	COG0372	Belongs to the citrate synthase family
CP942_RS18330	COG0538	isocitrate dehydrogenase activity
CP942_RS18335	COG0039	L-malate dehydrogenase activity
CP942_RS18340	COG0745	RESPONSE REGULATOR receiver
CP942_RS18345	COG5002	protein histidine kinase activity
CP942_RS18350	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CP942_RS18350	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CP942_RS18355	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CP942_RS18360	COG1971	Probably functions as a manganese efflux pump
CP942_RS18365	COG0237	dephospho-CoA kinase activity
CP942_RS18370	COG3866	Pectate lyase
CP942_RS18375	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CP942_RS18380	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CP942_RS18395	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CP942_RS18400	COG3611	Membrane attachment protein
CP942_RS18405	COG1484	DNA-dependent DNA replication
CP942_RS18410	COG0398	Pfam SNARE associated Golgi protein
CP942_RS18420	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CP942_RS18425	COG1011	Hydrolase
CP942_RS18435	COG3275	phosphorelay sensor kinase activity
CP942_RS18440	COG3279	Response regulator of the LytR AlgR family
CP942_RS18445	COG3540	Alkaline phosphatase
CP942_RS18455	COG1346	cytolysis
CP942_RS18460	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CP942_RS18465	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CP942_RS18470	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CP942_RS18475	COG3326	Membrane
CP942_RS18485	COG1363	Peptidase, m42
CP942_RS18490	COG3507	Belongs to the glycosyl hydrolase 43 family
CP942_RS18495	COG2160	L-arabinose isomerase activity
CP942_RS18500	COG1069	ribulokinase activity
CP942_RS18505	COG0235	Class ii aldolase
CP942_RS18510	COG0371	Dehydrogenase
CP942_RS18515	COG1653	transport
CP942_RS18520	COG1175	transmembrane transport
CP942_RS18525	COG0395	ABC-type sugar transport system, permease component
CP942_RS18545	COG3402	PFAM membrane-flanked domain
CP942_RS18550	COG1309	transcriptional regulator
CP942_RS18555	COG1966	Carbon starvation protein
CP942_RS18565	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CP942_RS18570	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CP942_RS18575	COG0072	phenylalanine-tRNA ligase activity
CP942_RS18575	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CP942_RS18600	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CP942_RS18605	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
CP942_RS18610	COG1286	toxin biosynthetic process
CP942_RS18615	COG1796	DNA polymerase
CP942_RS18615	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CP942_RS18625	COG3766	membrane
CP942_RS18630	COG0318	PFAM AMP-dependent synthetase and ligase
CP942_RS18635	COG1309	transcriptional regulator
CP942_RS18640	COG1024	Enoyl-CoA hydratase
CP942_RS18645	COG2086	electron transfer activity
CP942_RS18650	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CP942_RS18660	COG3118	belongs to the thioredoxin family
CP942_RS18665	COG0322	excinuclease ABC activity
CP942_RS18685	COG1136	(ABC) transporter
CP942_RS18685	COG0577	efflux transmembrane transporter activity
CP942_RS18700	COG1719	4-vinyl reductase, 4VR
CP942_RS18705	COG2009	succinate dehydrogenase
CP942_RS18710	COG1053	succinate dehydrogenase
CP942_RS18715	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CP942_RS18720	COG0824	Thioesterase
CP942_RS18725	COG4221	oxidoreductase activity
CP942_RS18730	COG2197	response regulator
CP942_RS18735	COG1846	Transcriptional regulator
CP942_RS18740	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CP942_RS18745	COG5401	PFAM Sporulation and spore germination
CP942_RS18750	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CP942_RS18755	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CP942_RS18760	COG0622	Phosphoesterase
CP942_RS18780	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CP942_RS18790	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CP942_RS18795	COG0028	Belongs to the TPP enzyme family
CP942_RS18800	COG0440	acetolactate synthase activity
CP942_RS18805	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CP942_RS18810	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CP942_RS18815	COG0473	3-isopropylmalate dehydrogenase activity
CP942_RS18820	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CP942_RS18825	COG0066	3-isopropylmalate dehydratase activity
CP942_RS18830	COG1477	protein flavinylation
CP942_RS18830	COG0457	Tetratricopeptide repeat
CP942_RS18835	COG0544	peptidyl-prolyl cis-trans isomerase activity
CP942_RS18840	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CP942_RS18845	COG0470	DNA polymerase III
CP942_RS18845	COG1067	ATP-dependent peptidase activity
CP942_RS18850	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CP942_RS18855	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CP942_RS18865	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CP942_RS18870	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CP942_RS18875	COG0181	hydroxymethylbilane synthase activity
CP942_RS18880	COG1587	Uroporphyrinogen-III synthase
CP942_RS18885	COG0113	porphobilinogen synthase activity
CP942_RS18890	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CP942_RS18895	COG1388	LysM domain
CP942_RS18900	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CP942_RS18910	COG0525	valine-tRNA ligase activity
CP942_RS18915	COG0285	dihydrofolate synthase activity
CP942_RS18920	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CP942_RS18930	COG0424	maF-like protein
CP942_RS18935	COG2003	Belongs to the UPF0758 family
CP942_RS18940	COG1077	Cell shape determining protein MreB Mrl
CP942_RS18950	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CP942_RS18955	COG0850	regulation of cytokinetic process
CP942_RS18960	COG2894	cell division
CP942_RS18965	COG0640	Transcriptional regulator
CP942_RS18970	COG3832	glyoxalase III activity
CP942_RS18975	COG0739	heme binding
CP942_RS18980	COG1994	Peptidase M50
CP942_RS18985	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CP942_RS18990	COG2868	ribosomal protein
CP942_RS18995	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CP942_RS19000	COG3290	protein histidine kinase activity
CP942_RS19005	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CP942_RS19010	COG4492	Belongs to the UPF0735 family
CP942_RS19015	COG0077	Prephenate dehydratase
CP942_RS19020	COG1827	regulation of RNA biosynthetic process
CP942_RS19025	COG1104	cysteine desulfurase activity
CP942_RS19030	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CP942_RS19035	COG0157	Belongs to the NadC ModD family
CP942_RS19040	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CP942_RS19045	COG1388	LysM domain
CP942_RS19055	COG0217	transcriptional regulatory protein
CP942_RS19070	COG4195	phage-related replication protein
CP942_RS19085	COG2112	serine threonine protein kinase
CP942_RS19095	COG0632	four-way junction helicase activity
CP942_RS19100	COG2255	four-way junction helicase activity
CP942_RS19110	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CP942_RS19115	COG0343	queuine tRNA-ribosyltransferase activity
CP942_RS19120	COG1862	Preprotein translocase
CP942_RS19130	COG2323	membrane
CP942_RS19135	COG2244	polysaccharide biosynthetic process
CP942_RS19145	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CP942_RS19145	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CP942_RS19150	COG5416	Lipopolysaccharide assembly protein A domain
CP942_RS19155	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CP942_RS19155	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CP942_RS19160	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CP942_RS19165	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CP942_RS19170	COG1490	D-aminoacyl-tRNA deacylase activity
CP942_RS19175	COG3103	Sh3 type 3 domain protein
CP942_RS19175	COG0860	N-Acetylmuramoyl-L-alanine amidase
CP942_RS19175	COG4991	sh3 domain protein
CP942_RS19180	COG0124	histidyl-tRNA synthetase
CP942_RS19185	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CP942_RS19195	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CP942_RS19200	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CP942_RS19205	COG1959	2 iron, 2 sulfur cluster binding
CP942_RS19210	COG1104	cysteine desulfurase activity
CP942_RS19215	COG0482	sulfurtransferase activity
CP942_RS19220	COG0457	Tetratricopeptide repeat
CP942_RS19225	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CP942_RS19230	COG3881	PFAM PRC-barrel domain
CP942_RS19245	COG0628	permease
CP942_RS19250	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CP942_RS19255	COG4472	Bacterial protein of unknown function (DUF965)
CP942_RS19265	COG3906	Belongs to the UPF0473 family
CP942_RS19270	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CP942_RS19275	COG4122	O-methyltransferase activity
CP942_RS19280	COG0826	peptidase U32
CP942_RS19285	COG0826	peptidase U32
CP942_RS19290	COG0572	uridine kinase
CP942_RS19295	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CP942_RS19300	COG0768	penicillin binding
CP942_RS19315	COG2226	methyltransferase
CP942_RS19320	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CP942_RS19325	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP942_RS19330	COG0626	cystathionine gamma-synthase activity
CP942_RS19350	COG2226	methyltransferase
CP942_RS19355	COG1404	Belongs to the peptidase S8 family
CP942_RS19360	COG1309	transcriptional regulator
CP942_RS19365	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CP942_RS19365	COG2124	cytochrome p450
CP942_RS19380	COG0583	DNA-binding transcription factor activity
CP942_RS19385	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP942_RS19395	COG1587	Uroporphyrinogen-III synthase
CP942_RS19400	COG3340	Belongs to the peptidase S51 family
CP942_RS19405	COG1733	regulation of RNA biosynthetic process
CP942_RS19410	COG2814	Major facilitator Superfamily
CP942_RS19415	COG0656	L-ascorbic acid biosynthetic process
CP942_RS19425	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CP942_RS19430	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CP942_RS19440	COG2205	protein histidine kinase activity
CP942_RS19445	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CP942_RS19450	COG2169	Transcriptional regulator
CP942_RS19470	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CP942_RS19470	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CP942_RS19475	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP942_RS19480	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP942_RS19490	COG3716	PTS system mannose fructose sorbose family IID component
CP942_RS19495	COG1621	beta-fructofuranosidase activity
CP942_RS19500	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS19510	COG2211	Major facilitator Superfamily
CP942_RS19515	COG3507	Belongs to the glycosyl hydrolase 43 family
CP942_RS19520	COG0730	response to heat
CP942_RS19525	COG2124	cytochrome p450
CP942_RS19540	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS19560	COG4608	Belongs to the ABC transporter superfamily
CP942_RS19565	COG0444	Belongs to the ABC transporter superfamily
CP942_RS19570	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP942_RS19575	COG0601	transmembrane transport
CP942_RS19580	COG0747	negative chemotaxis
CP942_RS19585	COG0492	ferredoxin-NADP+ reductase activity
CP942_RS19590	COG2197	response regulator
CP942_RS19595	COG4585	Histidine kinase
CP942_RS19600	COG3239	Fatty acid desaturase
CP942_RS19605	COG1733	regulation of RNA biosynthetic process
CP942_RS19610	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
CP942_RS19615	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CP942_RS19620	COG1942	4-Oxalocrotonate Tautomerase
CP942_RS19655	COG1937	Protein conserved in bacteria
CP942_RS19660	COG2210	Belongs to the sulfur carrier protein TusA family
CP942_RS19665	COG0425	Belongs to the sulfur carrier protein TusA family
CP942_RS19665	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CP942_RS19670	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CP942_RS19670	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP942_RS19675	COG0425	Belongs to the sulfur carrier protein TusA family
CP942_RS19680	COG0730	response to heat
CP942_RS19685	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CP942_RS19690	COG4585	Histidine kinase
CP942_RS19695	COG2197	response regulator
CP942_RS19705	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP942_RS19735	COG4978	Transcriptional regulator
CP942_RS19735	COG0789	Transcriptional regulator
CP942_RS19750	COG2807	transmembrane transport
CP942_RS19760	COG1486	melibiose metabolic process
CP942_RS19765	COG0561	phosphatase activity
CP942_RS19790	COG0251	oxidation-reduction process
CP942_RS19795	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP942_RS19805	COG0251	oxidation-reduction process
CP942_RS19810	COG3616	Alanine racemase, N-terminal domain
CP942_RS19825	COG1247	-acetyltransferase
CP942_RS19860	COG4608	Belongs to the ABC transporter superfamily
CP942_RS19865	COG0444	Belongs to the ABC transporter superfamily
CP942_RS19880	COG0747	negative chemotaxis
CP942_RS19885	COG1473	amidohydrolase
CP942_RS19910	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CP942_RS19915	COG1116	anion transmembrane transporter activity
CP942_RS19920	COG1309	transcriptional regulator
CP942_RS19940	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP942_RS19955	COG0454	-acetyltransferase
CP942_RS19960	COG2311	Membrane
CP942_RS19965	COG0745	RESPONSE REGULATOR receiver
CP942_RS19970	COG5002	protein histidine kinase activity
CP942_RS19970	COG0642	Histidine kinase
CP942_RS19975	COG3223	Belongs to the PsiE family
CP942_RS19995	COG2427	Protein of unknown function (DUF1641)
CP942_RS20000	COG3383	formate dehydrogenase (NAD+) activity
CP942_RS20005	COG5609	conserved protein (DUF2294)
CP942_RS20015	COG2755	lipolytic protein G-D-S-L family
CP942_RS20025	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CP942_RS20030	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CP942_RS20040	COG1534	Rna-binding protein
CP942_RS20045	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CP942_RS20050	COG1713	HD superfamily hydrolase involved in NAD metabolism
CP942_RS20055	COG0799	negative regulation of ribosome biogenesis
CP942_RS20060	COG2226	methyltransferase
CP942_RS20065	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CP942_RS20070	COG1555	photosystem II stabilization
CP942_RS20070	COG1596	polysaccharide export
CP942_RS20075	COG2131	deaminase
CP942_RS20080	COG2333	competence protein COMEC
CP942_RS20080	COG0658	competence protein
CP942_RS20090	COG1466	dna polymerase III delta subunit
CP942_RS20095	COG2249	NAD(P)H dehydrogenase (quinone) activity
CP942_RS20100	COG1733	regulation of RNA biosynthetic process
CP942_RS20110	COG0268	Binds directly to 16S ribosomal RNA
CP942_RS20115	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CP942_RS20120	COG0860	N-Acetylmuramoyl-L-alanine amidase
CP942_RS20130	COG0481	GTPase activity
CP942_RS20135	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CP942_RS20140	COG1420	regulation of RNA biosynthetic process
CP942_RS20145	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CP942_RS20150	COG0443	Heat shock 70 kDa protein
CP942_RS20155	COG0484	heat shock protein binding
CP942_RS20160	COG2264	protein methyltransferase activity
CP942_RS20165	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CP942_RS20170	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CP942_RS20175	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CP942_RS20180	COG1283	sodium-dependent phosphate transmembrane transporter activity
CP942_RS20185	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CP942_RS20190	COG1610	YqeY-like protein
CP942_RS20195	COG1030	water channel activity
CP942_RS20200	COG4864	UPF0365 protein
CP942_RS20215	COG0561	phosphatase activity
CP942_RS20220	COG1702	phosphate starvation-inducible protein PhoH
CP942_RS20225	COG1480	7TM receptor with intracellular HD hydrolase
CP942_RS20230	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CP942_RS20235	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CP942_RS20240	COG0295	cytidine deaminase activity
CP942_RS20245	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CP942_RS20255	COG1381	Involved in DNA repair and RecF pathway recombination
CP942_RS20260	COG0752	glycyl-tRNA synthetase alpha subunit
CP942_RS20265	COG0751	glycine-tRNA ligase activity
CP942_RS20270	COG0517	IMP dehydrogenase activity
CP942_RS20275	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CP942_RS20280	COG1671	Belongs to the UPF0178 family
CP942_RS20285	COG0358	DNA primase activity
CP942_RS20290	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CP942_RS20300	COG2010	Cytochrome c
CP942_RS20340	COG2384	SAM-dependent methyltransferase
CP942_RS20345	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CP942_RS20350	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CP942_RS20360	COG0513	Belongs to the DEAD box helicase family
CP942_RS20365	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CP942_RS20375	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CP942_RS20380	COG1121	(ABC) transporter
CP942_RS20385	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CP942_RS20390	COG0735	belongs to the Fur family
CP942_RS20395	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
CP942_RS20400	COG4709	membrane
CP942_RS20405	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CP942_RS20410	COG1388	LysM domain
CP942_RS20415	COG5521	maltodextrose utilization protein MalA
CP942_RS20420	COG2839	Protein conserved in bacteria
CP942_RS20425	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CP942_RS20435	COG0477	Major facilitator Superfamily
CP942_RS20440	COG0768	penicillin binding
CP942_RS20445	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CP942_RS20450	COG0573	inorganic phosphate transmembrane transporter activity
CP942_RS20455	COG0581	inorganic phosphate transmembrane transporter activity
CP942_RS20460	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CP942_RS20465	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CP942_RS20470	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CP942_RS20485	COG0438	transferase activity, transferring glycosyl groups
CP942_RS20490	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CP942_RS20495	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CP942_RS20500	COG0457	Tetratricopeptide repeat
CP942_RS20500	COG0705	Rhomboid family
CP942_RS20505	COG0697	spore germination
CP942_RS20510	COG4483	Protein conserved in bacteria
CP942_RS20515	COG1940	carbohydrate kinase activity
CP942_RS20520	COG1368	sulfuric ester hydrolase activity
CP942_RS20525	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP942_RS20530	COG2866	Carboxypeptidase
CP942_RS20540	COG0011	TIGRFAM Protein of
CP942_RS20550	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP942_RS20560	COG1393	Belongs to the ArsC family
CP942_RS20570	COG1366	Belongs to the anti-sigma-factor antagonist family
CP942_RS20575	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CP942_RS20580	COG1459	type II secretion system
CP942_RS20585	COG4537	Required for transformation and DNA binding
CP942_RS20590	COG4970	Tfp pilus assembly protein FimT
CP942_RS20600	COG4940	Competence protein ComGF
CP942_RS20625	COG0681	Belongs to the peptidase S26 family
CP942_RS20650	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CP942_RS20655	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CP942_RS20660	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CP942_RS20665	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CP942_RS20670	COG4175	Glycine betaine
CP942_RS20670	COG0517	IMP dehydrogenase activity
CP942_RS20675	COG4176	ABC-type proline glycine betaine transport system permease component
CP942_RS20680	COG2113	Glycine betaine
CP942_RS20685	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CP942_RS20690	COG0095	Lipoate-protein ligase
CP942_RS20695	COG1321	iron dependent repressor
CP942_RS20700	COG1752	Esterase of the alpha-beta hydrolase superfamily
CP942_RS20710	COG3872	metal-dependent enzyme
CP942_RS20720	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CP942_RS20725	COG0006	proline dipeptidase activity
CP942_RS20730	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CP942_RS20740	COG3854	ATPases associated with a variety of cellular activities
CP942_RS20780	COG0511	ligase activity, forming carbon-carbon bonds
CP942_RS20785	COG0439	Biotin carboxylase
CP942_RS20790	COG1302	Protein conserved in bacteria
CP942_RS20795	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CP942_RS20800	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CP942_RS20805	COG1570	exodeoxyribonuclease VII activity
CP942_RS20810	COG1722	exodeoxyribonuclease VII activity
CP942_RS20815	COG0142	geranyltranstransferase activity
CP942_RS20820	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CP942_RS20825	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CP942_RS20830	COG1438	arginine binding
CP942_RS20835	COG0497	DNA recombination
CP942_RS20840	COG0750	zinc metalloprotease
CP942_RS20845	COG0745	RESPONSE REGULATOR receiver
CP942_RS20870	COG0860	N-Acetylmuramoyl-L-alanine amidase
CP942_RS20875	COG0584	glycerophosphoryl diester phosphodiesterase
CP942_RS20890	COG0280	phosphate acetyltransferase
CP942_RS20900	COG3426	butyrate kinase activity
CP942_RS20905	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CP942_RS20910	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CP942_RS20915	COG0022	dehydrogenase e1 component
CP942_RS20920	COG0508	dehydrogenase complex catalyzes the overall conversion of
CP942_RS20925	COG1597	lipid kinase activity
CP942_RS20935	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CP942_RS20940	COG0765	amino acid transport
CP942_RS20945	COG1126	abc transporter atp-binding protein
CP942_RS20950	COG4129	membrane
CP942_RS20955	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CP942_RS20960	COG2195	Cleaves the N-terminal amino acid of tripeptides
CP942_RS20965	COG0706	membrane insertase activity
CP942_RS20975	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CP942_RS20980	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CP942_RS20985	COG1028	Short-chain dehydrogenase reductase Sdr
CP942_RS20990	COG1785	Belongs to the alkaline phosphatase family
CP942_RS20995	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CP942_RS21000	COG1447	Phosphotransferase system cellobiose-specific component IIA
CP942_RS21005	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CP942_RS21010	COG2723	6-phospho-beta-galactosidase activity
CP942_RS21015	COG2188	Transcriptional regulator
CP942_RS21020	COG2358	TRAP transporter, solute receptor (TAXI family
CP942_RS21035	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CP942_RS21040	COG1234	tRNA 3'-trailer cleavage
CP942_RS21045	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CP942_RS21050	COG0596	Alpha beta hydrolase
CP942_RS21055	COG1902	pentaerythritol trinitrate reductase activity
CP942_RS21060	COG4187	Peptidase family M20/M25/M40
CP942_RS21065	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CP942_RS21070	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP942_RS21075	COG0300	oxidoreductase activity
CP942_RS21090	COG2814	Major facilitator Superfamily
CP942_RS21095	COG0457	Tetratricopeptide repeat
CP942_RS21110	COG4195	phage-related replication protein
CP942_RS21120	COG2814	Major facilitator Superfamily
CP942_RS21125	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
CP942_RS21145	COG0745	RESPONSE REGULATOR receiver
CP942_RS21150	COG2205	protein histidine kinase activity
CP942_RS21170	COG3842	ATPase activity
CP942_RS21185	COG1072	(Pantothenic acid kinase))
CP942_RS21190	COG0346	lactoylglutathione lyase activity
CP942_RS21195	COG2211	Major facilitator Superfamily
CP942_RS21205	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CP942_RS21220	COG0534	Mate efflux family protein
CP942_RS21230	COG0444	Belongs to the ABC transporter superfamily
CP942_RS21235	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP942_RS21240	COG0601	transmembrane transport
CP942_RS21245	COG0747	negative chemotaxis
CP942_RS21255	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
CP942_RS21260	COG2329	Antibiotic biosynthesis monooxygenase
CP942_RS21265	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CP942_RS21265	COG0456	acetyltransferase
CP942_RS21275	COG4918	Iron-sulphur cluster biosynthesis
CP942_RS21285	COG1073	alpha beta
CP942_RS21295	COG0667	Aldo Keto reductase
CP942_RS21305	COG1309	transcriptional regulator
CP942_RS21315	COG0494	nUDIX hydrolase
CP942_RS21320	COG1379	DNA repair
CP942_RS21325	COG2153	protein acetylation
CP942_RS21345	COG1953	Uracil, thiamine, allantoin
CP942_RS21355	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CP942_RS21360	COG1300	Membrane
CP942_RS21365	COG0735	belongs to the Fur family
CP942_RS21375	COG4974	Belongs to the 'phage' integrase family
CP942_RS21380	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CP942_RS21385	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CP942_RS21390	COG1686	Belongs to the peptidase S11 family
CP942_RS21425	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CP942_RS21440	COG0697	spore germination
CP942_RS21450	COG0019	diaminopimelate decarboxylase activity
CP942_RS21460	COG4195	phage-related replication protein
CP942_RS21465	COG4086	secreted protein
CP942_RS21470	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CP942_RS21475	COG0457	Tetratricopeptide repeat
CP942_RS21495	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CP942_RS21495	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CP942_RS21500	COG0307	riboflavin synthase, alpha
CP942_RS21505	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CP942_RS21505	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CP942_RS21510	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CP942_RS21515	COG0456	acetyltransferase
CP942_RS21520	COG1547	Domain of unknown function (DUF309)
CP942_RS21530	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CP942_RS21535	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CP942_RS21545	COG1686	Belongs to the peptidase S11 family
CP942_RS21550	COG2715	membrane protein required for spore maturation
CP942_RS21555	COG0700	Nucleoside recognition
CP942_RS21560	COG1187	pseudouridine synthase activity
CP942_RS21565	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CP942_RS21570	COG1333	cytochrome c biogenesis protein
CP942_RS21575	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CP942_RS21580	COG0745	RESPONSE REGULATOR receiver
CP942_RS21585	COG5002	protein histidine kinase activity
CP942_RS21590	COG0745	RESPONSE REGULATOR receiver
CP942_RS21595	COG5002	protein histidine kinase activity
CP942_RS21610	COG1316	TRANSCRIPTIONal
CP942_RS21615	COG1595	DNA-templated transcription, initiation
CP942_RS21625	COG0739	heme binding
CP942_RS21630	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CP942_RS21635	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CP942_RS21640	COG1141	Ferredoxin
CP942_RS21645	COG4955	Helix-turn-helix domain
CP942_RS21650	COG0514	ATP-dependent DNA helicase (RecQ)
CP942_RS21655	COG1266	CAAX protease self-immunity
CP942_RS21670	COG1408	metallophosphoesterase
CP942_RS21675	COG4862	establishment of competence for transformation
CP942_RS21680	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CP942_RS21685	COG0492	ferredoxin-NADP+ reductase activity
CP942_RS21695	COG2339	peptidase activity
CP942_RS21700	COG3409	Peptidoglycan-binding domain 1 protein
CP942_RS21700	COG3773	Cell wall hydrolase
CP942_RS21705	COG2959	enzyme of heme biosynthesis
CP942_RS21710	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CP942_RS21715	COG0539	negative regulation of cytoplasmic translation
CP942_RS21720	COG1304	FMN binding
CP942_RS21745	COG1160	GTP binding
CP942_RS21750	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CP942_RS21770	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CP942_RS21775	COG0776	regulation of translation
CP942_RS21790	COG0142	geranyltranstransferase activity
CP942_RS21795	COG2226	methyltransferase
CP942_RS21800	COG0142	geranyltranstransferase activity
CP942_RS21805	COG0105	UTP biosynthetic process
CP942_RS21810	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CP942_RS21815	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CP942_RS21820	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CP942_RS21825	COG4401	Chorismate mutase type I
CP942_RS21830	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CP942_RS21835	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CP942_RS21840	COG0134	indole-3-glycerol-phosphate synthase activity
CP942_RS21845	COG0135	phosphoribosylanthranilate isomerase activity
CP942_RS21850	COG0133	tryptophan synthase activity
CP942_RS21855	COG0159	tryptophan synthase activity
CP942_RS21860	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CP942_RS21865	COG0287	Prephenate dehydrogenase
CP942_RS21870	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CP942_RS21875	COG0457	Tetratricopeptide repeat
CP942_RS21880	COG5582	Belongs to the UPF0302 family
CP942_RS21890	COG0723	plastoquinol--plastocyanin reductase activity
CP942_RS21895	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CP942_RS21900	COG2010	Cytochrome c
CP942_RS21900	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CP942_RS21905	COG4347	Protein of unknown function (DUF1405)
CP942_RS21915	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CP942_RS21920	COG1694	Mazg nucleotide pyrophosphohydrolase
CP942_RS21925	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CP942_RS21930	COG1803	Methylglyoxal synthase
CP942_RS21935	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CP942_RS21940	COG0438	transferase activity, transferring glycosyl groups
CP942_RS21945	COG0617	tRNA 3'-terminal CCA addition
CP942_RS21960	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CP942_RS21965	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CP942_RS21970	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CP942_RS21975	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CP942_RS21975	COG1199	ATP-dependent helicase activity
CP942_RS21985	COG5353	protein conserved in bacteria
CP942_RS21990	COG0436	Aminotransferase
CP942_RS21995	COG0017	Asparaginyl-tRNA synthetase
CP942_RS22000	COG3935	DnaD domain protein
CP942_RS22005	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CP942_RS22015	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CP942_RS22015	COG4499	WXG100 protein secretion system (Wss), protein YukC
CP942_RS22020	COG3331	DNA recombination
CP942_RS22055	COG0071	Belongs to the small heat shock protein (HSP20) family
CP942_RS22060	COG2190	(PTS) system
CP942_RS22065	COG1111	helicase
CP942_RS22065	COG1205	dead DEAH box helicase
CP942_RS22080	COG4474	Belongs to the UPF0398 family
CP942_RS22085	COG3599	regulation of cell shape
CP942_RS22095	COG0116	Belongs to the methyltransferase superfamily
CP942_RS22115	COG1199	ATP-dependent helicase activity
CP942_RS22120	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CP942_RS22125	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CP942_RS22130	COG2233	PERMEase
CP942_RS22140	COG3424	synthase
CP942_RS22145	COG1755	Isoprenylcysteine carboxyl methyltransferase
CP942_RS22155	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CP942_RS22165	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CP942_RS22175	COG0328	RNA-DNA hybrid ribonuclease activity
CP942_RS22180	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CP942_RS22185	COG0328	RNA-DNA hybrid ribonuclease activity
CP942_RS22205	COG1278	Cold shock
CP942_RS22215	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CP942_RS22220	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
CP942_RS22225	COG2759	Belongs to the formate--tetrahydrofolate ligase family
CP942_RS22230	COG0386	Belongs to the glutathione peroxidase family
CP942_RS22235	COG1418	mRNA catabolic process
CP942_RS22240	COG1413	lyase activity
CP942_RS22245	COG0129	dihydroxy-acid dehydratase activity
CP942_RS22255	COG2521	methyltransferase
CP942_RS22255	COG2136	Putative SAM-dependent methyltransferase
CP942_RS22265	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CP942_RS22270	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CP942_RS22275	COG0204	Acyl-transferase
CP942_RS22280	COG1272	protein, Hemolysin III
CP942_RS22285	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CP942_RS22290	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CP942_RS22310	COG1999	signal sequence binding
CP942_RS22315	COG2755	lipolytic protein G-D-S-L family
CP942_RS22320	COG4698	Protein conserved in bacteria
CP942_RS22335	COG0534	Mate efflux family protein