CP942_RS00015	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS00055	SM00882	Coenzyme A transferase
CP942_RS00060	SM00882	Coenzyme A transferase
CP942_RS00100	SM00014	Acid phosphatase homologues
CP942_RS00145	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP942_RS00145	SM00245	tail specific protease
CP942_RS00225	SM00257	Lysin motif
CP942_RS00235	SM00382	ATPases associated with a variety of cellular activities
CP942_RS00240	SM00327	von Willebrand factor (vWF) type A domain
CP942_RS00245	SM00861	Transketolase, pyrimidine binding domain
CP942_RS00410	SM00860	SMI1 / KNR4 family
CP942_RS00465	SM00860	SMI1 / KNR4 family
CP942_RS00475	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP942_RS00475	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CP942_RS00510	SM00341	Helicase and RNase D C-terminal
CP942_RS00510	SM00487	DEAD-like helicases superfamily
CP942_RS00510	SM00490	helicase superfamily c-terminal domain
CP942_RS00510	SM00956	CP942_RS00510
CP942_RS00515	SM00257	Lysin motif
CP942_RS00585	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP942_RS00605	SM00871	Bacterial transcription activator, effector binding domain
CP942_RS00610	SM00849	Metallo-beta-lactamase superfamily
CP942_RS00645	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS00670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS00670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS00670	SM00319	Homologues of the ligand binding domain of Tar
CP942_RS00675	SM00382	ATPases associated with a variety of cellular activities
CP942_RS00710	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS00715	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP942_RS00730	SM00822	CP942_RS00730
CP942_RS00740	SM00382	ATPases associated with a variety of cellular activities
CP942_RS00745	SM00382	ATPases associated with a variety of cellular activities
CP942_RS00750	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS00750	SM00529	Helix-turn-helix diphteria tox regulatory element
CP942_RS00800	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CP942_RS00835	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CP942_RS00865	SM00823	Phosphopantetheine attachment site
CP942_RS00870	SM00823	Phosphopantetheine attachment site
CP942_RS00875	SM00823	Phosphopantetheine attachment site
CP942_RS00880	SM00823	Phosphopantetheine attachment site
CP942_RS00885	SM00823	Phosphopantetheine attachment site
CP942_RS00890	SM00878	Biotin carboxylase C-terminal domain
CP942_RS00950	SM00382	ATPases associated with a variety of cellular activities
CP942_RS01010	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP942_RS01020	SM00226	Low molecular weight phosphatase family
CP942_RS01025	SM00354	helix_turn _helix lactose operon repressor
CP942_RS01060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS01065	SM00382	ATPases associated with a variety of cellular activities
CP942_RS01165	SM00710	Parallel beta-helix repeats
CP942_RS01165	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CP942_RS01200	SM01067	Cellulose binding domain
CP942_RS01220	SM00100	Cyclic nucleotide-monophosphate binding domain
CP942_RS01220	SM00419	helix_turn_helix, cAMP Regulatory protein
CP942_RS01235	SM00100	Cyclic nucleotide-monophosphate binding domain
CP942_RS01235	SM00419	helix_turn_helix, cAMP Regulatory protein
CP942_RS01250	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP942_RS01265	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP942_RS01315	SM01007	Class II Aldolase and Adducin N-terminal domain
CP942_RS01325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS01330	SM00434	DNA Topoisomerase IV
CP942_RS01335	SM00387	Histidine kinase-like ATPases
CP942_RS01335	SM00433	TopoisomeraseII
CP942_RS01340	SM00881	CoA binding domain
CP942_RS01345	SM01207	CP942_RS01345
CP942_RS01425	SM00448	cheY-homologous receiver domain
CP942_RS01450	SM00861	Transketolase, pyrimidine binding domain
CP942_RS01460	SM00857	Resolvase, N terminal domain
CP942_RS01465	SM00257	Lysin motif
CP942_RS01510	SM00903	Flavin reductase like domain
CP942_RS01525	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS01670	SM01230	CP942_RS01670
CP942_RS01675	SM00422	helix_turn_helix, mercury resistance
CP942_RS01690	SM00382	ATPases associated with a variety of cellular activities
CP942_RS01735	SM00988	UreE urease accessory protein, N-terminal domain
CP942_RS01775	SM00028	Tetratricopeptide repeats
CP942_RS01845	SM00646	CP942_RS01845
CP942_RS01855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS01855	SM00895	CP942_RS01855
CP942_RS01870	SM00849	Metallo-beta-lactamase superfamily
CP942_RS01965	SM00257	Lysin motif
CP942_RS01965	SM00636	CP942_RS01965
CP942_RS02060	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CP942_RS02075	SM00028	Tetratricopeptide repeats
CP942_RS02095	SM00028	Tetratricopeptide repeats
CP942_RS02105	SM00853	MutL C terminal dimerisation domain
CP942_RS02105	SM01340	CP942_RS02105
CP942_RS02110	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CP942_RS02110	SM00534	ATPase domain of DNA mismatch repair MUTS family
CP942_RS02125	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP942_RS02135	SM00829	Enoylreductase
CP942_RS02155	SM00322	K homology RNA-binding domain
CP942_RS02155	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP942_RS02160	SM00382	ATPases associated with a variety of cellular activities
CP942_RS02165	SM00852	Probable molybdopterin binding domain
CP942_RS02175	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS02210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS02210	SM00866	CP942_RS02210
CP942_RS02215	SM00382	ATPases associated with a variety of cellular activities
CP942_RS02215	SM00843	CP942_RS02215
CP942_RS02230	SM00849	Metallo-beta-lactamase superfamily
CP942_RS02235	SM01130	CP942_RS02235
CP942_RS02245	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CP942_RS02275	SM00316	Ribosomal protein S1-like RNA-binding domain
CP942_RS02275	SM00322	K homology RNA-binding domain
CP942_RS02280	SM01387	CP942_RS02280
CP942_RS02285	SM00904	Riboflavin kinase
CP942_RS02320	SM00316	Ribosomal protein S1-like RNA-binding domain
CP942_RS02320	SM00322	K homology RNA-binding domain
CP942_RS02345	SM01067	Cellulose binding domain
CP942_RS02350	SM00479	CP942_RS02350
CP942_RS02350	SM00481	DNA polymerase alpha chain like domain
CP942_RS02360	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP942_RS02420	SM00260	Two component signalling adaptor domain
CP942_RS02425	SM00073	Histidine Phosphotransfer domain
CP942_RS02425	SM00260	Two component signalling adaptor domain
CP942_RS02425	SM00387	Histidine kinase-like ATPases
CP942_RS02425	SM01231	CP942_RS02425
CP942_RS02430	SM00448	cheY-homologous receiver domain
CP942_RS02440	SM00382	ATPases associated with a variety of cellular activities
CP942_RS02440	SM00962	SRP54-type protein, GTPase domain
CP942_RS02475	SM00448	cheY-homologous receiver domain
CP942_RS02525	SM00382	ATPases associated with a variety of cellular activities
CP942_RS02565	SM00382	ATPases associated with a variety of cellular activities
CP942_RS02565	SM01086	C-terminal, D2-small domain, of ClpB protein
CP942_RS02585	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CP942_RS02585	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CP942_RS02585	SM00493	CP942_RS02585
CP942_RS02595	SM00881	CoA binding domain
CP942_RS02655	SM00382	ATPases associated with a variety of cellular activities
CP942_RS02655	SM00962	SRP54-type protein, GTPase domain
CP942_RS02655	SM00963	SRP54-type protein, helical bundle domain
CP942_RS02665	SM00382	ATPases associated with a variety of cellular activities
CP942_RS02665	SM00962	SRP54-type protein, GTPase domain
CP942_RS02665	SM00963	SRP54-type protein, helical bundle domain
CP942_RS02670	SM00968	SMC proteins Flexible Hinge Domain
CP942_RS02675	SM00358	Double-stranded RNA binding motif
CP942_RS02675	SM00535	Ribonuclease III family
CP942_RS02685	SM00822	CP942_RS02685
CP942_RS02690	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP942_RS02705	SM00487	DEAD-like helicases superfamily
CP942_RS02705	SM00490	helicase superfamily c-terminal domain
CP942_RS02720	SM01120	CP942_RS02720
CP942_RS02720	SM01121	CP942_RS02720
CP942_RS02740	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CP942_RS02755	SM00220	Serine/Threonine protein kinases, catalytic domain
CP942_RS02755	SM00740	CP942_RS02755
CP942_RS02760	SM00331	Sigma factor PP2C-like phosphatases
CP942_RS02760	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CP942_RS02785	SM00487	DEAD-like helicases superfamily
CP942_RS02785	SM00490	helicase superfamily c-terminal domain
CP942_RS02795	SM01409	CP942_RS02795
CP942_RS02800	SM00072	Guanylate kinase homologues.
CP942_RS02815	SM00831	Cation transporter/ATPase, N-terminus
CP942_RS02870	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CP942_RS02885	SM00851	MGS-like domain
CP942_RS02885	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CP942_RS02890	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CP942_RS02915	SM00363	S4 RNA-binding domain
CP942_RS02940	SM00363	S4 RNA-binding domain
CP942_RS02975	SM00382	ATPases associated with a variety of cellular activities
CP942_RS03005	SM00864	Tubulin/FtsZ family, GTPase domain
CP942_RS03005	SM00865	Tubulin/FtsZ family, C-terminal domain
CP942_RS03010	SM00842	Cell division protein FtsA
CP942_RS03065	SM00740	CP942_RS03065
CP942_RS03070	SM00740	CP942_RS03070
CP942_RS03125	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP942_RS03170	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS03215	SM00878	Biotin carboxylase C-terminal domain
CP942_RS03240	SM00670	Large family of predicted nucleotide-binding domains
CP942_RS03260	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS03270	SM00838	Elongation factor G C-terminus
CP942_RS03350	SM00861	Transketolase, pyrimidine binding domain
CP942_RS03390	SM00849	Metallo-beta-lactamase superfamily
CP942_RS03405	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CP942_RS03405	SM00091	PAS domain
CP942_RS03405	SM00387	Histidine kinase-like ATPases
CP942_RS03405	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS03410	SM00966	SpoVT / AbrB like domain 
CP942_RS03435	SM00382	ATPases associated with a variety of cellular activities
CP942_RS03465	SM00420	helix_turn_helix, Deoxyribose operon repressor
CP942_RS03465	SM01134	CP942_RS03465
CP942_RS03470	SM01066	Carbohydrate binding domain
CP942_RS03475	SM00382	ATPases associated with a variety of cellular activities
CP942_RS03490	SM00382	ATPases associated with a variety of cellular activities
CP942_RS03495	SM00382	ATPases associated with a variety of cellular activities
CP942_RS03520	SM00852	Probable molybdopterin binding domain
CP942_RS03620	SM00052	Putative diguanylate phosphodiesterase
CP942_RS03635	SM00257	Lysin motif
CP942_RS03650	SM00260	Two component signalling adaptor domain
CP942_RS03650	SM00448	cheY-homologous receiver domain
CP942_RS03670	SM00091	PAS domain
CP942_RS03670	SM00387	Histidine kinase-like ATPases
CP942_RS03670	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS03695	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS03695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS03730	SM01061	CAT RNA binding domain
CP942_RS03735	SM00354	helix_turn _helix lactose operon repressor
CP942_RS03810	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS03910	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS03950	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS04000	SM00382	ATPases associated with a variety of cellular activities
CP942_RS04000	SM01086	C-terminal, D2-small domain, of ClpB protein
CP942_RS04015	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS04020	SM00387	Histidine kinase-like ATPases
CP942_RS04020	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS04045	SM01007	Class II Aldolase and Adducin N-terminal domain
CP942_RS04085	SM00091	PAS domain
CP942_RS04085	SM00387	Histidine kinase-like ATPases
CP942_RS04085	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS04150	SM00267	diguanylate cyclase
CP942_RS04155	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CP942_RS04165	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS04180	SM00422	helix_turn_helix, mercury resistance
CP942_RS04190	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS04190	SM00924	MgtE intracellular N domain
CP942_RS04220	SM00855	Phosphoglycerate mutase family
CP942_RS04240	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS04255	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CP942_RS04300	SM00656	CP942_RS04300
CP942_RS04325	SM00382	ATPases associated with a variety of cellular activities
CP942_RS04335	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CP942_RS04350	SM00382	ATPases associated with a variety of cellular activities
CP942_RS04375	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP942_RS04465	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS04490	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS04490	SM00448	cheY-homologous receiver domain
CP942_RS04550	SM00829	Enoylreductase
CP942_RS04555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS04555	SM00895	CP942_RS04555
CP942_RS04560	SM00644	CP942_RS04560
CP942_RS04615	SM00257	Lysin motif
CP942_RS04710	SM00382	ATPases associated with a variety of cellular activities
CP942_RS04725	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS04730	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS04765	SM00257	Lysin motif
CP942_RS04810	SM01266	CP942_RS04810
CP942_RS04835	SM00860	SMI1 / KNR4 family
CP942_RS04850	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS05040	SM00954	Region found in RelA / SpoT proteins
CP942_RS05050	SM01118	CP942_RS05050
CP942_RS05090	SM00091	PAS domain
CP942_RS05090	SM00387	Histidine kinase-like ATPases
CP942_RS05095	SM00448	cheY-homologous receiver domain
CP942_RS05140	SM00382	ATPases associated with a variety of cellular activities
CP942_RS05145	SM00382	ATPases associated with a variety of cellular activities
CP942_RS05210	SM00382	ATPases associated with a variety of cellular activities
CP942_RS05215	SM00382	ATPases associated with a variety of cellular activities
CP942_RS05225	SM00825	Beta-ketoacyl synthase
CP942_RS05280	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CP942_RS05285	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CP942_RS05305	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CP942_RS05335	SM01240	CP942_RS05335
CP942_RS05365	SM00316	Ribosomal protein S1-like RNA-binding domain
CP942_RS05380	SM01018	B12 binding domain
CP942_RS05385	SM00420	helix_turn_helix, Deoxyribose operon repressor
CP942_RS05410	SM01006	Siderophore biosynthesis protein domain
CP942_RS05430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS05460	SM00354	helix_turn _helix lactose operon repressor
CP942_RS05470	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS05480	SM00938	Nitrogen regulatory protein P-II
CP942_RS05605	SM00448	cheY-homologous receiver domain
CP942_RS05605	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS05610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS05610	SM00387	Histidine kinase-like ATPases
CP942_RS05610	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS05675	SM00354	helix_turn _helix lactose operon repressor
CP942_RS05780	SM00914	CP942_RS05780
CP942_RS05795	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS05815	SM00855	Phosphoglycerate mutase family
CP942_RS05865	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS05885	SM00849	Metallo-beta-lactamase superfamily
CP942_RS05970	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06005	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS06045	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP942_RS06065	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06080	SM00028	Tetratricopeptide repeats
CP942_RS06090	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP942_RS06135	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06155	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06160	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06245	SM00646	CP942_RS06245
CP942_RS06260	SM01091	Transporter associated domain
CP942_RS06265	SM00422	helix_turn_helix, mercury resistance
CP942_RS06270	SM01091	Transporter associated domain
CP942_RS06290	SM00563	Phosphate acyltransferases
CP942_RS06325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS06330	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS06330	SM00871	Bacterial transcription activator, effector binding domain
CP942_RS06365	SM00257	Lysin motif
CP942_RS06400	SM00421	helix_turn_helix, Lux Regulon
CP942_RS06400	SM00448	cheY-homologous receiver domain
CP942_RS06405	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CP942_RS06405	SM00387	Histidine kinase-like ATPases
CP942_RS06410	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS06445	SM00829	Enoylreductase
CP942_RS06465	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06480	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS06500	SM00318	Staphylococcal nuclease homologues
CP942_RS06505	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CP942_RS06505	SM00091	PAS domain
CP942_RS06505	SM00387	Histidine kinase-like ATPases
CP942_RS06505	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS06560	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06560	SM00930	CP942_RS06560
CP942_RS06565	SM00357	Cold shock protein domain
CP942_RS06575	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06580	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS06620	SM00763	PrkA AAA domain
CP942_RS06650	SM00567	E-Z type HEAT repeats
CP942_RS06685	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06695	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS06715	SM00062	Bacterial periplasmic substrate-binding proteins
CP942_RS06720	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06745	SM00631	CP942_RS06745
CP942_RS06905	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06910	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06915	SM00382	ATPases associated with a variety of cellular activities
CP942_RS06945	SM00478	endonuclease III
CP942_RS06945	SM00525	CP942_RS06945
CP942_RS07055	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS07115	SM00382	ATPases associated with a variety of cellular activities
CP942_RS07130	SM00861	Transketolase, pyrimidine binding domain
CP942_RS07165	SM01061	CAT RNA binding domain
CP942_RS07225	SM00478	endonuclease III
CP942_RS07290	SM00226	Low molecular weight phosphatase family
CP942_RS07330	SM00984	UDP binding domain
CP942_RS07345	SM00028	Tetratricopeptide repeats
CP942_RS07395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS07395	SM00866	CP942_RS07395
CP942_RS07400	SM00642	Alpha-amylase domain
CP942_RS07445	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP942_RS07455	SM00636	CP942_RS07455
CP942_RS07465	SM00631	CP942_RS07465
CP942_RS07470	SM00849	Metallo-beta-lactamase superfamily
CP942_RS07475	SM00849	Metallo-beta-lactamase superfamily
CP942_RS07500	SM00829	Enoylreductase
CP942_RS07505	SM00487	DEAD-like helicases superfamily
CP942_RS07505	SM00490	helicase superfamily c-terminal domain
CP942_RS07510	SM00382	ATPases associated with a variety of cellular activities
CP942_RS07525	SM00422	helix_turn_helix, mercury resistance
CP942_RS07540	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP942_RS07540	SM00876	Biotin and Thiamin Synthesis associated domain
CP942_RS07565	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CP942_RS07585	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP942_RS07600	SM00382	ATPases associated with a variety of cellular activities
CP942_RS07620	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS07635	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP942_RS07650	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS07665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS07695	SM00028	Tetratricopeptide repeats
CP942_RS07700	SM01061	CAT RNA binding domain
CP942_RS07765	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CP942_RS07810	SM00845	GatB domain
CP942_RS07885	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP942_RS07885	SM00292	breast cancer carboxy-terminal domain
CP942_RS07885	SM00532	Ligase N family
CP942_RS07945	SM01209	CP942_RS07945
CP942_RS07945	SM01210	CP942_RS07945
CP942_RS07950	SM00798	AICARFT/IMPCHase bienzyme
CP942_RS07950	SM00851	MGS-like domain
CP942_RS07975	SM01211	CP942_RS07975
CP942_RS07990	SM00998	Adenylosuccinate lyase C-terminus
CP942_RS08000	SM01001	AIR carboxylase
CP942_RS08040	SM00460	Transglutaminase/protease-like homologues
CP942_RS08080	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS08080	SM00871	Bacterial transcription activator, effector binding domain
CP942_RS08135	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS08140	SM00363	S4 RNA-binding domain
CP942_RS08150	SM00642	Alpha-amylase domain
CP942_RS08180	SM00642	Alpha-amylase domain
CP942_RS08185	SM00354	helix_turn _helix lactose operon repressor
CP942_RS08190	SM00642	Alpha-amylase domain
CP942_RS08205	SM00420	helix_turn_helix, Deoxyribose operon repressor
CP942_RS08225	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS08340	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS08355	SM00883	Chaperonin 10 Kd subunit
CP942_RS08380	SM00881	CoA binding domain
CP942_RS08390	SM00382	ATPases associated with a variety of cellular activities
CP942_RS08475	SM00448	cheY-homologous receiver domain
CP942_RS08475	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS08480	SM00387	Histidine kinase-like ATPases
CP942_RS08480	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS08480	SM00448	cheY-homologous receiver domain
CP942_RS08600	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS08620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS08625	SM00829	Enoylreductase
CP942_RS08630	SM00357	Cold shock protein domain
CP942_RS08640	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS08655	SM00226	Low molecular weight phosphatase family
CP942_RS08665	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP942_RS08670	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP942_RS08720	SM00731	SprT homologues.
CP942_RS08745	SM00316	Ribosomal protein S1-like RNA-binding domain
CP942_RS08745	SM00732	Likely ribonuclease with RNase H fold.
CP942_RS08750	SM00331	Sigma factor PP2C-like phosphatases
CP942_RS08770	SM00331	Sigma factor PP2C-like phosphatases
CP942_RS08775	SM00387	Histidine kinase-like ATPases
CP942_RS08800	SM01005	Alanine racemase, C-terminal domain
CP942_RS08825	SM00487	DEAD-like helicases superfamily
CP942_RS08825	SM00490	helicase superfamily c-terminal domain
CP942_RS08875	SM00382	ATPases associated with a variety of cellular activities
CP942_RS08955	SM00830	Chorismate mutase type II
CP942_RS08970	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CP942_RS08970	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CP942_RS08970	SM00493	CP942_RS08970
CP942_RS08975	SM00344	helix_turn_helix ASNC type
CP942_RS09045	SM00346	helix_turn_helix isocitrate lyase regulation
CP942_RS09050	SM00797	Allophanate hydrolase subunit 2
CP942_RS09055	SM00796	Allophanate hydrolase subunit 1
CP942_RS09080	SM00861	Transketolase, pyrimidine binding domain
CP942_RS09120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS09120	SM00895	CP942_RS09120
CP942_RS09140	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP942_RS09150	SM00420	helix_turn_helix, Deoxyribose operon repressor
CP942_RS09190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS09195	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP942_RS09230	SM00382	ATPases associated with a variety of cellular activities
CP942_RS09250	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS09250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS09255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS09255	SM00387	Histidine kinase-like ATPases
CP942_RS09255	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS09260	SM00448	cheY-homologous receiver domain
CP942_RS09260	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS09270	SM00382	ATPases associated with a variety of cellular activities
CP942_RS09275	SM00422	helix_turn_helix, mercury resistance
CP942_RS09300	SM00710	Parallel beta-helix repeats
CP942_RS09310	SM00871	Bacterial transcription activator, effector binding domain
CP942_RS09325	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS09340	SM00382	ATPases associated with a variety of cellular activities
CP942_RS09350	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS09350	SM00448	cheY-homologous receiver domain
CP942_RS09455	SM00382	ATPases associated with a variety of cellular activities
CP942_RS09460	SM00062	Bacterial periplasmic substrate-binding proteins
CP942_RS09470	SM00382	ATPases associated with a variety of cellular activities
CP942_RS09510	SM00825	Beta-ketoacyl synthase
CP942_RS09515	SM00823	Phosphopantetheine attachment site
CP942_RS09515	SM00825	Beta-ketoacyl synthase
CP942_RS09515	SM01294	CP942_RS09515
CP942_RS09520	SM00822	CP942_RS09520
CP942_RS09520	SM00823	Phosphopantetheine attachment site
CP942_RS09520	SM00825	Beta-ketoacyl synthase
CP942_RS09520	SM00826	CP942_RS09520
CP942_RS09520	SM01294	CP942_RS09520
CP942_RS09530	SM00823	Phosphopantetheine attachment site
CP942_RS09530	SM01294	CP942_RS09530
CP942_RS09560	SM00826	CP942_RS09560
CP942_RS09595	SM00825	Beta-ketoacyl synthase
CP942_RS09605	SM00822	CP942_RS09605
CP942_RS09605	SM00823	Phosphopantetheine attachment site
CP942_RS09605	SM00825	Beta-ketoacyl synthase
CP942_RS09605	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
CP942_RS09605	SM01294	CP942_RS09605
CP942_RS09610	SM00823	Phosphopantetheine attachment site
CP942_RS09610	SM00825	Beta-ketoacyl synthase
CP942_RS09610	SM01294	CP942_RS09610
CP942_RS09615	SM00822	CP942_RS09615
CP942_RS09615	SM00823	Phosphopantetheine attachment site
CP942_RS09615	SM00825	Beta-ketoacyl synthase
CP942_RS09615	SM00826	CP942_RS09615
CP942_RS09615	SM01294	CP942_RS09615
CP942_RS09635	SM00849	Metallo-beta-lactamase superfamily
CP942_RS09640	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CP942_RS09650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS09650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS09680	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS09680	SM00871	Bacterial transcription activator, effector binding domain
CP942_RS09695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS09715	SM00823	Phosphopantetheine attachment site
CP942_RS09720	SM00823	Phosphopantetheine attachment site
CP942_RS09735	SM00382	ATPases associated with a variety of cellular activities
CP942_RS09760	SM00219	Tyrosine kinase, catalytic domain
CP942_RS09780	SM00382	ATPases associated with a variety of cellular activities
CP942_RS09790	SM00062	Bacterial periplasmic substrate-binding proteins
CP942_RS09810	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS09960	SM00382	ATPases associated with a variety of cellular activities
CP942_RS10010	SM00636	CP942_RS10010
CP942_RS10015	SM00060	Fibronectin type 3 domain
CP942_RS10015	SM00495	Chitin-binding domain type 3
CP942_RS10015	SM00636	CP942_RS10015
CP942_RS10025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS10025	SM00866	CP942_RS10025
CP942_RS10085	SM00870	CP942_RS10085
CP942_RS10110	SM00822	CP942_RS10110
CP942_RS10125	SM00387	Histidine kinase-like ATPases
CP942_RS10125	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS10130	SM00448	cheY-homologous receiver domain
CP942_RS10130	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS10145	SM00382	ATPases associated with a variety of cellular activities
CP942_RS10185	SM00422	helix_turn_helix, mercury resistance
CP942_RS10200	SM00093	SERine  Proteinase INhibitors
CP942_RS10210	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS10240	SM00382	ATPases associated with a variety of cellular activities
CP942_RS10245	SM00387	Histidine kinase-like ATPases
CP942_RS10245	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS10250	SM00448	cheY-homologous receiver domain
CP942_RS10250	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS10270	SM00858	CP942_RS10270
CP942_RS10275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS10275	SM00895	CP942_RS10275
CP942_RS10280	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CP942_RS10295	SM01130	CP942_RS10295
CP942_RS10335	SM00448	cheY-homologous receiver domain
CP942_RS10375	SM00422	helix_turn_helix, mercury resistance
CP942_RS10435	SM00421	helix_turn_helix, Lux Regulon
CP942_RS10440	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS10445	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS10505	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS10505	SM00895	CP942_RS10505
CP942_RS10520	SM01126	CP942_RS10520
CP942_RS10685	SM00382	ATPases associated with a variety of cellular activities
CP942_RS10700	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP942_RS10710	SM00422	helix_turn_helix, mercury resistance
CP942_RS10720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS10890	SM01251	CP942_RS10890
CP942_RS10905	SM00646	CP942_RS10905
CP942_RS10915	SM00860	SMI1 / KNR4 family
CP942_RS10945	SM00382	ATPases associated with a variety of cellular activities
CP942_RS10950	SM00382	ATPases associated with a variety of cellular activities
CP942_RS10960	SM00662	RNA polymerases D
CP942_RS10980	SM00316	Ribosomal protein S1-like RNA-binding domain
CP942_RS11045	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CP942_RS11050	SM01374	CP942_RS11050
CP942_RS11070	SM00322	K homology RNA-binding domain
CP942_RS11085	SM01382	CP942_RS11085
CP942_RS11085	SM01383	CP942_RS11085
CP942_RS11105	SM01403	CP942_RS11105
CP942_RS11115	SM00838	Elongation factor G C-terminus
CP942_RS11115	SM00889	Elongation factor G, domain IV
CP942_RS11135	SM00663	RNA polymerase I subunit A N-terminus
CP942_RS11165	SM00649	Ribosomal protein L11/L12
CP942_RS11170	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CP942_RS11170	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CP942_RS11195	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CP942_RS11200	SM00535	Ribonuclease III family
CP942_RS11205	SM00840	CP942_RS11205
CP942_RS11230	SM00670	Large family of predicted nucleotide-binding domains
CP942_RS11240	SM00382	ATPases associated with a variety of cellular activities
CP942_RS11245	SM00382	ATPases associated with a variety of cellular activities
CP942_RS11245	SM01086	C-terminal, D2-small domain, of ClpB protein
CP942_RS11350	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS11360	SM00905	Dihydroneopterin aldolase
CP942_RS11410	SM00382	ATPases associated with a variety of cellular activities
CP942_RS11420	SM00977	TilS substrate C-terminal domain
CP942_RS11425	SM00220	Serine/Threonine protein kinases, catalytic domain
CP942_RS11435	SM00331	Sigma factor PP2C-like phosphatases
CP942_RS11435	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CP942_RS11450	SM00316	Ribosomal protein S1-like RNA-binding domain
CP942_RS11470	SM00363	S4 RNA-binding domain
CP942_RS11485	SM00966	SpoVT / AbrB like domain 
CP942_RS11490	SM00487	DEAD-like helicases superfamily
CP942_RS11490	SM00490	helicase superfamily c-terminal domain
CP942_RS11490	SM00982	CP942_RS11490
CP942_RS11490	SM01058	CarD-like/TRCF domain
CP942_RS11510	SM01400	CP942_RS11510
CP942_RS11555	SM00650	Ribosomal RNA adenine dimethylases
CP942_RS11565	SM01208	CP942_RS11565
CP942_RS11580	SM00966	SpoVT / AbrB like domain 
CP942_RS11590	SM00465	GIY-YIG type nucleases (URI domain)
CP942_RS11685	SM00493	CP942_RS11685
CP942_RS11695	SM00382	ATPases associated with a variety of cellular activities
CP942_RS11715	SM00257	Lysin motif
CP942_RS11715	SM00636	CP942_RS11715
CP942_RS11735	SM00860	SMI1 / KNR4 family
CP942_RS11770	SM00936	Penicillin-binding protein 5, C-terminal domain 
CP942_RS11775	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS11775	SM01240	CP942_RS11775
CP942_RS11810	SM00434	DNA Topoisomerase IV
CP942_RS11815	SM00387	Histidine kinase-like ATPases
CP942_RS11815	SM00433	TopoisomeraseII
CP942_RS11835	SM00480	DNA polymerase III beta subunit
CP942_RS11840	SM00382	ATPases associated with a variety of cellular activities
CP942_RS11840	SM00760	Bacterial dnaA protein helix-turn-helix domain
CP942_RS11860	SM00393	Putative single-stranded nucleic acids-binding domain
CP942_RS11860	SM01245	CP942_RS11860
CP942_RS11870	SM01228	CP942_RS11870
CP942_RS11880	SM00470	ParB-like nuclease domain
CP942_RS11900	SM00470	ParB-like nuclease domain
CP942_RS11965	SM00267	diguanylate cyclase
CP942_RS11985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS11985	SM00866	CP942_RS11985
CP942_RS12020	SM00382	ATPases associated with a variety of cellular activities
CP942_RS12030	SM00788	Adenylosuccinate synthetase
CP942_RS12060	SM00448	cheY-homologous receiver domain
CP942_RS12060	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS12065	SM00091	PAS domain
CP942_RS12065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS12065	SM00387	Histidine kinase-like ATPases
CP942_RS12065	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS12080	SM00849	Metallo-beta-lactamase superfamily
CP942_RS12085	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP942_RS12130	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS12145	SM00421	helix_turn_helix, Lux Regulon
CP942_RS12145	SM00448	cheY-homologous receiver domain
CP942_RS12160	SM00382	ATPases associated with a variety of cellular activities
CP942_RS12170	SM00465	GIY-YIG type nucleases (URI domain)
CP942_RS12245	SM01350	CP942_RS12245
CP942_RS12260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS12260	SM00895	CP942_RS12260
CP942_RS12270	SM00450	Rhodanese Homology Domain
CP942_RS12275	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS12280	SM00419	helix_turn_helix, cAMP Regulatory protein
CP942_RS12300	SM00354	helix_turn _helix lactose operon repressor
CP942_RS12330	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CP942_RS12330	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CP942_RS12340	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS12340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS12350	SM00448	cheY-homologous receiver domain
CP942_RS12350	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS12355	SM00387	Histidine kinase-like ATPases
CP942_RS12355	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS12360	SM00382	ATPases associated with a variety of cellular activities
CP942_RS12375	SM00899	CP942_RS12375
CP942_RS12425	SM00382	ATPases associated with a variety of cellular activities
CP942_RS12430	SM00387	Histidine kinase-like ATPases
CP942_RS12450	SM00420	helix_turn_helix, Deoxyribose operon repressor
CP942_RS12450	SM01134	CP942_RS12450
CP942_RS12545	SM00267	diguanylate cyclase
CP942_RS12560	SM01133	CP942_RS12560
CP942_RS12570	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CP942_RS12585	SM00487	DEAD-like helicases superfamily
CP942_RS12585	SM00490	helicase superfamily c-terminal domain
CP942_RS12615	SM00448	cheY-homologous receiver domain
CP942_RS12615	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS12620	SM00387	Histidine kinase-like ATPases
CP942_RS12625	SM00382	ATPases associated with a variety of cellular activities
CP942_RS12725	SM00382	ATPases associated with a variety of cellular activities
CP942_RS12735	SM01061	CAT RNA binding domain
CP942_RS12750	SM00871	Bacterial transcription activator, effector binding domain
CP942_RS12755	SM01060	CP942_RS12755
CP942_RS12820	SM00354	helix_turn _helix lactose operon repressor
CP942_RS12845	SM00640	Glycosyl hydrolases family 32
CP942_RS12875	SM00100	Cyclic nucleotide-monophosphate binding domain
CP942_RS12875	SM00419	helix_turn_helix, cAMP Regulatory protein
CP942_RS12935	SM00894	Excalibur calcium-binding domain
CP942_RS12960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS12990	SM00382	ATPases associated with a variety of cellular activities
CP942_RS13000	SM00387	Histidine kinase-like ATPases
CP942_RS13005	SM00448	cheY-homologous receiver domain
CP942_RS13005	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS13015	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS13020	SM00870	CP942_RS13020
CP942_RS13035	SM00919	Malic enzyme, NAD binding domain
CP942_RS13035	SM01274	CP942_RS13035
CP942_RS13065	SM00382	ATPases associated with a variety of cellular activities
CP942_RS13070	SM00382	ATPases associated with a variety of cellular activities
CP942_RS13080	SM00656	CP942_RS13080
CP942_RS13095	SM01060	CP942_RS13095
CP942_RS13100	SM01060	CP942_RS13100
CP942_RS13135	SM00382	ATPases associated with a variety of cellular activities
CP942_RS13165	SM00382	ATPases associated with a variety of cellular activities
CP942_RS13195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS13195	SM00895	CP942_RS13195
CP942_RS13270	SM00954	Region found in RelA / SpoT proteins
CP942_RS13290	SM00346	helix_turn_helix isocitrate lyase regulation
CP942_RS13305	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CP942_RS13325	SM00421	helix_turn_helix, Lux Regulon
CP942_RS13325	SM00448	cheY-homologous receiver domain
CP942_RS13330	SM00387	Histidine kinase-like ATPases
CP942_RS13360	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CP942_RS13470	SM00421	helix_turn_helix, Lux Regulon
CP942_RS13470	SM00448	cheY-homologous receiver domain
CP942_RS13490	SM00382	ATPases associated with a variety of cellular activities
CP942_RS13495	SM00382	ATPases associated with a variety of cellular activities
CP942_RS13565	SM01061	CAT RNA binding domain
CP942_RS13575	SM00640	Glycosyl hydrolases family 32
CP942_RS13595	SM00986	Uracil DNA glycosylase superfamily
CP942_RS13595	SM00987	UreE urease accessory protein, C-terminal domain 
CP942_RS13620	SM00421	helix_turn_helix, Lux Regulon
CP942_RS13620	SM00448	cheY-homologous receiver domain
CP942_RS13630	SM00382	ATPases associated with a variety of cellular activities
CP942_RS13680	SM00346	helix_turn_helix isocitrate lyase regulation
CP942_RS13735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP942_RS13785	SM00836	DALR anticodon binding domain
CP942_RS13785	SM01016	Arginyl tRNA synthetase N terminal dom
CP942_RS13795	SM00155	Phospholipase D. Active site motifs.
CP942_RS13840	SM00448	cheY-homologous receiver domain
CP942_RS13865	SM00357	Cold shock protein domain
CP942_RS13865	SM00382	ATPases associated with a variety of cellular activities
CP942_RS13865	SM00959	Rho termination factor, N-terminal domain
CP942_RS13880	SM00919	Malic enzyme, NAD binding domain
CP942_RS13880	SM01274	CP942_RS13880
CP942_RS13900	SM00937	CP942_RS13900
CP942_RS13920	SM00354	helix_turn _helix lactose operon repressor
CP942_RS13965	SM00226	Low molecular weight phosphatase family
CP942_RS14030	SM00382	ATPases associated with a variety of cellular activities
CP942_RS14060	SM00327	von Willebrand factor (vWF) type A domain
CP942_RS14065	SM00327	von Willebrand factor (vWF) type A domain
CP942_RS14085	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP942_RS14115	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS14140	SM00822	CP942_RS14140
CP942_RS14160	SM00823	Phosphopantetheine attachment site
CP942_RS14160	SM00824	Thioesterase
CP942_RS14165	SM00923	MbtH-like protein
CP942_RS14175	SM00155	Phospholipase D. Active site motifs.
CP942_RS14205	SM00938	Nitrogen regulatory protein P-II
CP942_RS14215	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS14215	SM01091	Transporter associated domain
CP942_RS14225	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS14250	SM01131	CP942_RS14250
CP942_RS14255	SM00014	Acid phosphatase homologues
CP942_RS14265	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS14355	SM00420	helix_turn_helix, Deoxyribose operon repressor
CP942_RS14355	SM01134	CP942_RS14355
CP942_RS14365	SM00028	Tetratricopeptide repeats
CP942_RS14385	SM00487	DEAD-like helicases superfamily
CP942_RS14385	SM00490	helicase superfamily c-terminal domain
CP942_RS14420	SM00344	helix_turn_helix ASNC type
CP942_RS14465	SM00382	ATPases associated with a variety of cellular activities
CP942_RS14480	SM00354	helix_turn _helix lactose operon repressor
CP942_RS14495	SM00854	Bacterial capsule synthesis protein PGA_cap
CP942_RS14535	SM00354	helix_turn _helix lactose operon repressor
CP942_RS14570	SM00047	Lysozyme subfamily 2
CP942_RS14570	SM00287	Bacterial SH3 domain homologues
CP942_RS14640	SM00382	ATPases associated with a variety of cellular activities
CP942_RS14690	SM00984	UDP binding domain
CP942_RS14740	SM00387	Histidine kinase-like ATPases
CP942_RS14745	SM00421	helix_turn_helix, Lux Regulon
CP942_RS14745	SM00448	cheY-homologous receiver domain
CP942_RS14755	SM00487	DEAD-like helicases superfamily
CP942_RS14755	SM00490	helicase superfamily c-terminal domain
CP942_RS14850	SM00957	SecA DEAD-like domain
CP942_RS14850	SM00958	SecA preprotein cross-linking domain
CP942_RS14875	SM00382	ATPases associated with a variety of cellular activities
CP942_RS14890	SM01329	CP942_RS14890
CP942_RS14895	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP942_RS14895	SM00245	tail specific protease
CP942_RS14905	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP942_RS14920	SM00487	DEAD-like helicases superfamily
CP942_RS14920	SM00490	helicase superfamily c-terminal domain
CP942_RS14925	SM00382	ATPases associated with a variety of cellular activities
CP942_RS14970	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS15055	SM00028	Tetratricopeptide repeats
CP942_RS15125	SM00947	Carbonic anhydrase
CP942_RS15135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP942_RS15175	SM00640	Glycosyl hydrolases family 32
CP942_RS15200	SM01130	CP942_RS15200
CP942_RS15235	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS15330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS15330	SM00895	CP942_RS15330
CP942_RS15355	SM00382	ATPases associated with a variety of cellular activities
CP942_RS15380	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CP942_RS15405	SM01192	CP942_RS15405
CP942_RS15405	SM01193	CP942_RS15405
CP942_RS15425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS15460	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS15460	SM00382	ATPases associated with a variety of cellular activities
CP942_RS15480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS15485	SM00382	ATPases associated with a variety of cellular activities
CP942_RS15495	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS15500	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS15505	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS15510	SM00966	SpoVT / AbrB like domain 
CP942_RS15525	SM00316	Ribosomal protein S1-like RNA-binding domain
CP942_RS15525	SM00357	Cold shock protein domain
CP942_RS15525	SM00955	CP942_RS15525
CP942_RS15560	SM00606	Cellulose Binding Domain Type IV
CP942_RS15585	SM00835	Cupin
CP942_RS15605	SM00450	Rhodanese Homology Domain
CP942_RS15625	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS15625	SM00529	Helix-turn-helix diphteria tox regulatory element
CP942_RS15660	SM01007	Class II Aldolase and Adducin N-terminal domain
CP942_RS15680	SM00420	helix_turn_helix, Deoxyribose operon repressor
CP942_RS15680	SM01134	CP942_RS15680
CP942_RS15745	SM00382	ATPases associated with a variety of cellular activities
CP942_RS15750	SM00606	Cellulose Binding Domain Type IV
CP942_RS15750	SM01217	CP942_RS15750
CP942_RS15870	SM00382	ATPases associated with a variety of cellular activities
CP942_RS15875	SM00448	cheY-homologous receiver domain
CP942_RS15875	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS15880	SM00387	Histidine kinase-like ATPases
CP942_RS15880	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS15895	SM00354	helix_turn _helix lactose operon repressor
CP942_RS15905	SM00858	CP942_RS15905
CP942_RS15910	SM00710	Parallel beta-helix repeats
CP942_RS15930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS15930	SM00895	CP942_RS15930
CP942_RS15945	SM00382	ATPases associated with a variety of cellular activities
CP942_RS15950	SM01130	CP942_RS15950
CP942_RS16010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS16010	SM00387	Histidine kinase-like ATPases
CP942_RS16015	SM00421	helix_turn_helix, Lux Regulon
CP942_RS16015	SM00448	cheY-homologous receiver domain
CP942_RS16055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS16055	SM00387	Histidine kinase-like ATPases
CP942_RS16055	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS16060	SM00448	cheY-homologous receiver domain
CP942_RS16060	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS16070	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP942_RS16115	SM00382	ATPases associated with a variety of cellular activities
CP942_RS16175	SM00493	CP942_RS16175
CP942_RS16190	SM00382	ATPases associated with a variety of cellular activities
CP942_RS16190	SM00930	CP942_RS16190
CP942_RS16215	SM00382	ATPases associated with a variety of cellular activities
CP942_RS16260	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CP942_RS16350	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP942_RS16430	SM00028	Tetratricopeptide repeats
CP942_RS16540	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CP942_RS16540	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CP942_RS16595	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP942_RS16645	SM00052	Putative diguanylate phosphodiesterase
CP942_RS16675	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP942_RS16675	SM00387	Histidine kinase-like ATPases
CP942_RS16680	SM00421	helix_turn_helix, Lux Regulon
CP942_RS16680	SM00448	cheY-homologous receiver domain
CP942_RS16755	SM00448	cheY-homologous receiver domain
CP942_RS16760	SM00091	PAS domain
CP942_RS16760	SM00387	Histidine kinase-like ATPases
CP942_RS16785	SM00479	CP942_RS16785
CP942_RS16790	SM01298	CP942_RS16790
CP942_RS16820	SM00344	helix_turn_helix ASNC type
CP942_RS16830	SM00316	Ribosomal protein S1-like RNA-binding domain
CP942_RS16860	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS16865	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS16900	SM00885	D5 N terminal like
CP942_RS16910	SM00891	ERCC4 domain
CP942_RS16950	SM00507	HNH nucleases
CP942_RS17040	SM00047	Lysozyme subfamily 2
CP942_RS17045	SM00710	Parallel beta-helix repeats
CP942_RS17075	SM00257	Lysin motif
CP942_RS17075	SM00641	Glycosyl hydrolases family 25
CP942_RS17150	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS17150	SM01091	Transporter associated domain
CP942_RS17170	SM00642	Alpha-amylase domain
CP942_RS17190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS17190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS17190	SM00319	Homologues of the ligand binding domain of Tar
CP942_RS17195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS17195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS17195	SM00319	Homologues of the ligand binding domain of Tar
CP942_RS17200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CP942_RS17200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS17200	SM00319	Homologues of the ligand binding domain of Tar
CP942_RS17300	SM00835	Cupin
CP942_RS17305	SM01005	Alanine racemase, C-terminal domain
CP942_RS17390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS17515	SM00642	Alpha-amylase domain
CP942_RS17610	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CP942_RS17615	SM00947	Carbonic anhydrase
CP942_RS17620	SM01234	CP942_RS17620
CP942_RS17665	SM00382	ATPases associated with a variety of cellular activities
CP942_RS17710	SM00014	Acid phosphatase homologues
CP942_RS17740	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP942_RS17750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS17755	SM00382	ATPases associated with a variety of cellular activities
CP942_RS17765	SM00382	ATPases associated with a variety of cellular activities
CP942_RS17835	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS17875	SM00450	Rhodanese Homology Domain
CP942_RS17900	SM00363	S4 RNA-binding domain
CP942_RS17905	SM00420	helix_turn_helix, Deoxyribose operon repressor
CP942_RS17910	SM00382	ATPases associated with a variety of cellular activities
CP942_RS17955	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CP942_RS17960	SM00642	Alpha-amylase domain
CP942_RS17980	SM00849	Metallo-beta-lactamase superfamily
CP942_RS17985	SM00919	Malic enzyme, NAD binding domain
CP942_RS17985	SM01274	CP942_RS17985
CP942_RS18020	SM00382	ATPases associated with a variety of cellular activities
CP942_RS18020	SM00843	CP942_RS18020
CP942_RS18050	SM00830	Chorismate mutase type II
CP942_RS18055	SM00354	helix_turn _helix lactose operon repressor
CP942_RS18075	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS18090	SM00363	S4 RNA-binding domain
CP942_RS18105	SM00363	S4 RNA-binding domain
CP942_RS18105	SM01390	CP942_RS18105
CP942_RS18110	SM00267	diguanylate cyclase
CP942_RS18115	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CP942_RS18145	SM00981	CP942_RS18145
CP942_RS18160	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS18205	SM00852	Probable molybdopterin binding domain
CP942_RS18225	SM00849	Metallo-beta-lactamase superfamily
CP942_RS18235	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS18265	SM00481	DNA polymerase alpha chain like domain
CP942_RS18270	SM00919	Malic enzyme, NAD binding domain
CP942_RS18270	SM01274	CP942_RS18270
CP942_RS18330	SM01329	CP942_RS18330
CP942_RS18340	SM00448	cheY-homologous receiver domain
CP942_RS18340	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS18345	SM00091	PAS domain
CP942_RS18345	SM00387	Histidine kinase-like ATPases
CP942_RS18345	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS18350	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CP942_RS18350	SM00474	3'-5' exonuclease
CP942_RS18350	SM00475	5'-3' exonuclease
CP942_RS18350	SM00482	DNA polymerase A domain
CP942_RS18355	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CP942_RS18355	SM01232	CP942_RS18355
CP942_RS18370	SM00656	CP942_RS18370
CP942_RS18375	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CP942_RS18405	SM00382	ATPases associated with a variety of cellular activities
CP942_RS18420	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CP942_RS18435	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CP942_RS18435	SM00387	Histidine kinase-like ATPases
CP942_RS18440	SM00448	cheY-homologous receiver domain
CP942_RS18440	SM00850	LytTr DNA-binding domain
CP942_RS18505	SM01007	Class II Aldolase and Adducin N-terminal domain
CP942_RS18530	SM00813	Alpha-L-arabinofuranosidase C-terminus
CP942_RS18565	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CP942_RS18575	SM00873	B3/4 domain
CP942_RS18575	SM00874	tRNA synthetase B5 domain
CP942_RS18575	SM00896	Ferredoxin-fold anticodon binding domain
CP942_RS18615	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP942_RS18615	SM00481	DNA polymerase alpha chain like domain
CP942_RS18615	SM00483	DNA polymerase X family
CP942_RS18645	SM00893	Electron transfer flavoprotein domain
CP942_RS18650	SM00893	Electron transfer flavoprotein domain
CP942_RS18665	SM00465	GIY-YIG type nucleases (URI domain)
CP942_RS18675	SM00387	Histidine kinase-like ATPases
CP942_RS18675	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS18680	SM00448	cheY-homologous receiver domain
CP942_RS18680	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS18685	SM00382	ATPases associated with a variety of cellular activities
CP942_RS18730	SM00421	helix_turn_helix, Lux Regulon
CP942_RS18735	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP942_RS18745	SM00909	Sporulation and spore germination
CP942_RS18780	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CP942_RS18810	SM00917	LeuA allosteric (dimerisation) domain
CP942_RS18815	SM01329	CP942_RS18815
CP942_RS18840	SM00382	ATPases associated with a variety of cellular activities
CP942_RS18840	SM00994	ClpX C4-type zinc finger
CP942_RS18840	SM01086	C-terminal, D2-small domain, of ClpB protein
CP942_RS18845	SM00382	ATPases associated with a variety of cellular activities
CP942_RS18850	SM00382	ATPases associated with a variety of cellular activities
CP942_RS18850	SM00464	Found in ATP-dependent protease La (LON)
CP942_RS18885	SM01004	Delta-aminolevulinic acid dehydratase
CP942_RS18895	SM00257	Lysin motif
CP942_RS18965	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP942_RS19000	SM01317	CP942_RS19000
CP942_RS19045	SM00257	Lysin motif
CP942_RS19085	SM00220	Serine/Threonine protein kinases, catalytic domain
CP942_RS19095	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP942_RS19100	SM00382	ATPases associated with a variety of cellular activities
CP942_RS19120	SM01323	CP942_RS19120
CP942_RS19165	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP942_RS19165	SM00954	Region found in RelA / SpoT proteins
CP942_RS19175	SM00287	Bacterial SH3 domain homologues
CP942_RS19175	SM00646	CP942_RS19175
CP942_RS19200	SM00382	ATPases associated with a variety of cellular activities
CP942_RS19220	SM00028	Tetratricopeptide repeats
CP942_RS19225	SM00382	ATPases associated with a variety of cellular activities
CP942_RS19250	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CP942_RS19315	SM00650	Ribosomal RNA adenine dimethylases
CP942_RS19450	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS19455	SM01059	Chloramphenicol acetyltransferase
CP942_RS19470	SM00382	ATPases associated with a variety of cellular activities
CP942_RS19495	SM00640	Glycosyl hydrolases family 32
CP942_RS19535	SM00014	Acid phosphatase homologues
CP942_RS19545	SM00342	helix_turn_helix, arabinose operon control protein
CP942_RS19555	SM00422	helix_turn_helix, mercury resistance
CP942_RS19560	SM00382	ATPases associated with a variety of cellular activities
CP942_RS19565	SM00382	ATPases associated with a variety of cellular activities
CP942_RS19590	SM00421	helix_turn_helix, Lux Regulon
CP942_RS19590	SM00448	cheY-homologous receiver domain
CP942_RS19610	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CP942_RS19625	SM00650	Ribosomal RNA adenine dimethylases
CP942_RS19665	SM00450	Rhodanese Homology Domain
CP942_RS19670	SM00450	Rhodanese Homology Domain
CP942_RS19670	SM00849	Metallo-beta-lactamase superfamily
CP942_RS19690	SM00387	Histidine kinase-like ATPases
CP942_RS19695	SM00421	helix_turn_helix, Lux Regulon
CP942_RS19695	SM00448	cheY-homologous receiver domain
CP942_RS19705	SM00450	Rhodanese Homology Domain
CP942_RS19705	SM00849	Metallo-beta-lactamase superfamily
CP942_RS19735	SM00422	helix_turn_helix, mercury resistance
CP942_RS19740	SM00903	Flavin reductase like domain
CP942_RS19745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS19745	SM00895	CP942_RS19745
CP942_RS19800	SM00870	CP942_RS19800
CP942_RS19810	SM01119	CP942_RS19810
CP942_RS19815	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CP942_RS19860	SM00382	ATPases associated with a variety of cellular activities
CP942_RS19865	SM00382	ATPases associated with a variety of cellular activities
CP942_RS19905	SM00062	Bacterial periplasmic substrate-binding proteins
CP942_RS19915	SM00382	ATPases associated with a variety of cellular activities
CP942_RS19965	SM00448	cheY-homologous receiver domain
CP942_RS19965	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS19970	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS20000	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP942_RS20000	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CP942_RS20040	SM01103	CP942_RS20040
CP942_RS20050	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP942_RS20070	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP942_RS20080	SM00849	Metallo-beta-lactamase superfamily
CP942_RS20130	SM00838	Elongation factor G C-terminus
CP942_RS20135	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP942_RS20155	SM00271	DnaJ molecular chaperone homology domain
CP942_RS20170	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP942_RS20175	SM01133	CP942_RS20175
CP942_RS20225	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP942_RS20270	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS20285	SM00400	zinc finger
CP942_RS20285	SM00493	CP942_RS20285
CP942_RS20360	SM00487	DEAD-like helicases superfamily
CP942_RS20360	SM00490	helicase superfamily c-terminal domain
CP942_RS20365	SM00518	AP endonuclease family 2
CP942_RS20380	SM00382	ATPases associated with a variety of cellular activities
CP942_RS20460	SM00382	ATPases associated with a variety of cellular activities
CP942_RS20465	SM00382	ATPases associated with a variety of cellular activities
CP942_RS20500	SM00028	Tetratricopeptide repeats
CP942_RS20530	SM00631	CP942_RS20530
CP942_RS20550	SM00849	Metallo-beta-lactamase superfamily
CP942_RS20575	SM00382	ATPases associated with a variety of cellular activities
CP942_RS20635	SM00530	Helix-turn-helix XRE-family like proteins 
CP942_RS20650	SM00487	DEAD-like helicases superfamily
CP942_RS20650	SM00490	helicase superfamily c-terminal domain
CP942_RS20670	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP942_RS20670	SM00382	ATPases associated with a variety of cellular activities
CP942_RS20685	SM00450	Rhodanese Homology Domain
CP942_RS20695	SM00529	Helix-turn-helix diphteria tox regulatory element
CP942_RS20730	SM00841	Elongation factor P, C-terminal
CP942_RS20730	SM01185	CP942_RS20730
CP942_RS20740	SM00382	ATPases associated with a variety of cellular activities
CP942_RS20785	SM00878	Biotin carboxylase C-terminal domain
CP942_RS20820	SM00861	Transketolase, pyrimidine binding domain
CP942_RS20825	SM00363	S4 RNA-binding domain
CP942_RS20840	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP942_RS20845	SM00448	cheY-homologous receiver domain
CP942_RS20870	SM00646	CP942_RS20870
CP942_RS20895	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CP942_RS20915	SM00861	Transketolase, pyrimidine binding domain
CP942_RS20925	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CP942_RS20935	SM00062	Bacterial periplasmic substrate-binding proteins
CP942_RS20935	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CP942_RS20945	SM00382	ATPases associated with a variety of cellular activities
CP942_RS20980	SM01350	CP942_RS20980
CP942_RS20990	SM00098	Alkaline phosphatase homologues
CP942_RS21015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP942_RS21015	SM00866	CP942_RS21015
CP942_RS21070	SM00849	Metallo-beta-lactamase superfamily
CP942_RS21095	SM00028	Tetratricopeptide repeats
CP942_RS21135	SM00823	Phosphopantetheine attachment site
CP942_RS21140	SM00823	Phosphopantetheine attachment site
CP942_RS21145	SM00448	cheY-homologous receiver domain
CP942_RS21145	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS21150	SM00387	Histidine kinase-like ATPases
CP942_RS21150	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS21155	SM00382	ATPases associated with a variety of cellular activities
CP942_RS21160	SM00014	Acid phosphatase homologues
CP942_RS21170	SM00382	ATPases associated with a variety of cellular activities
CP942_RS21225	SM00382	ATPases associated with a variety of cellular activities
CP942_RS21230	SM00382	ATPases associated with a variety of cellular activities
CP942_RS21270	SM00704	CDGSH-type zinc finger. Function unknown.
CP942_RS21390	SM00936	Penicillin-binding protein 5, C-terminal domain 
CP942_RS21400	SM00387	Histidine kinase-like ATPases
CP942_RS21475	SM00028	Tetratricopeptide repeats
CP942_RS21545	SM00936	Penicillin-binding protein 5, C-terminal domain 
CP942_RS21560	SM00363	S4 RNA-binding domain
CP942_RS21580	SM00448	cheY-homologous receiver domain
CP942_RS21580	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS21585	SM00091	PAS domain
CP942_RS21585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS21585	SM00387	Histidine kinase-like ATPases
CP942_RS21585	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS21590	SM00448	cheY-homologous receiver domain
CP942_RS21590	SM00862	Transcriptional regulatory protein, C terminal
CP942_RS21595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP942_RS21595	SM00387	Histidine kinase-like ATPases
CP942_RS21595	SM00388	His Kinase A (phosphoacceptor) domain
CP942_RS21625	SM00257	Lysin motif
CP942_RS21650	SM00487	DEAD-like helicases superfamily
CP942_RS21650	SM00490	helicase superfamily c-terminal domain
CP942_RS21680	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CP942_RS21715	SM00316	Ribosomal protein S1-like RNA-binding domain
CP942_RS21720	SM01240	CP942_RS21720
CP942_RS21775	SM00411	bacterial (prokaryotic) histone like domain
CP942_RS21805	SM00562	CP942_RS21805
CP942_RS21810	SM00138	Methyltransferase, chemotaxis proteins 
CP942_RS21875	SM00028	Tetratricopeptide repeats
CP942_RS21880	SM00914	CP942_RS21880
CP942_RS21930	SM00851	MGS-like domain
CP942_RS21975	SM00479	CP942_RS21975
CP942_RS21975	SM00487	DEAD-like helicases superfamily
CP942_RS21975	SM00491	CP942_RS21975
CP942_RS22005	SM00478	endonuclease III
CP942_RS22005	SM00525	CP942_RS22005
CP942_RS22015	SM00060	Fibronectin type 3 domain
CP942_RS22065	SM00487	DEAD-like helicases superfamily
CP942_RS22065	SM00490	helicase superfamily c-terminal domain
CP942_RS22095	SM00981	CP942_RS22095
CP942_RS22115	SM00491	CP942_RS22115
CP942_RS22165	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CP942_RS22165	SM00475	5'-3' exonuclease
CP942_RS22205	SM00357	Cold shock protein domain
CP942_RS22235	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP942_RS22240	SM00567	E-Z type HEAT repeats
CP942_RS22240	SM00932	Scaffold protein Nfu/NifU N terminal
CP942_RS22285	SM00382	ATPases associated with a variety of cellular activities
