BPOF4_RS00005 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BPOF4_RS00010 SM00480 DNA polymerase III beta subunit BPOF4_RS00030 SM00387 Histidine kinase-like ATPases BPOF4_RS00030 SM00433 TopoisomeraseII BPOF4_RS00035 SM00434 DNA Topoisomerase IV BPOF4_RS00040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS00065 SM00116 Domain in cystathionine beta-synthase and other proteins. BPOF4_RS00065 SM01240 BPOF4_RS00065 BPOF4_RS00070 SM00936 Penicillin-binding protein 5, C-terminal domain BPOF4_RS00090 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS00095 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS00125 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS00135 SM00493 BPOF4_RS00135 BPOF4_RS00205 SM00465 GIY-YIG type nucleases (URI domain) BPOF4_RS00215 SM00966 SpoVT / AbrB like domain BPOF4_RS00220 SM00933 BPOF4_RS00220 BPOF4_RS00240 SM01208 BPOF4_RS00240 BPOF4_RS00245 SM00493 BPOF4_RS00245 BPOF4_RS00250 SM00650 Ribosomal RNA adenine dimethylases BPOF4_RS00295 SM01400 BPOF4_RS00295 BPOF4_RS00315 SM00487 DEAD-like helicases superfamily BPOF4_RS00315 SM00490 helicase superfamily c-terminal domain BPOF4_RS00315 SM00982 BPOF4_RS00315 BPOF4_RS00315 SM01058 CarD-like/TRCF domain BPOF4_RS00320 SM00966 SpoVT / AbrB like domain BPOF4_RS00335 SM00363 S4 RNA-binding domain BPOF4_RS00355 SM00316 Ribosomal protein S1-like RNA-binding domain BPOF4_RS00365 SM00331 Sigma factor PP2C-like phosphatases BPOF4_RS00365 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BPOF4_RS00375 SM00220 Serine/Threonine protein kinases, catalytic domain BPOF4_RS00390 SM00977 TilS substrate C-terminal domain BPOF4_RS00400 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS00440 SM00905 Dihydroneopterin aldolase BPOF4_RS00450 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS00495 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS00495 SM01086 C-terminal, D2-small domain, of ClpB protein BPOF4_RS00500 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS00510 SM00670 Large family of predicted nucleotide-binding domains BPOF4_RS00535 SM00840 BPOF4_RS00535 BPOF4_RS00540 SM00535 Ribonuclease III family BPOF4_RS00545 SM00967 RNA 2'-O ribose methyltransferase substrate binding BPOF4_RS00565 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BPOF4_RS00565 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BPOF4_RS00570 SM00649 Ribosomal protein L11/L12 BPOF4_RS00600 SM00663 RNA polymerase I subunit A N-terminus BPOF4_RS00620 SM00838 Elongation factor G C-terminus BPOF4_RS00620 SM00889 Elongation factor G, domain IV BPOF4_RS00630 SM01403 BPOF4_RS00630 BPOF4_RS00650 SM01382 BPOF4_RS00650 BPOF4_RS00650 SM01383 BPOF4_RS00650 BPOF4_RS00665 SM00322 K homology RNA-binding domain BPOF4_RS00685 SM01374 BPOF4_RS00685 BPOF4_RS00690 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BPOF4_RS00755 SM00316 Ribosomal protein S1-like RNA-binding domain BPOF4_RS00775 SM00662 RNA polymerases D BPOF4_RS00785 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS00790 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS00845 SM00646 BPOF4_RS00845 BPOF4_RS00860 SM01251 BPOF4_RS00860 BPOF4_RS00985 SM00257 Lysin motif BPOF4_RS00990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BPOF4_RS00990 SM00267 diguanylate cyclase BPOF4_RS01120 SM00062 Bacterial periplasmic substrate-binding proteins BPOF4_RS01130 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS01135 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS01135 SM00930 BPOF4_RS01135 BPOF4_RS01200 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BPOF4_RS01200 SM00091 PAS domain BPOF4_RS01200 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS01205 SM00387 Histidine kinase-like ATPases BPOF4_RS01220 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS01250 SM00116 Domain in cystathionine beta-synthase and other proteins. BPOF4_RS01250 SM00924 MgtE intracellular N domain BPOF4_RS01255 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS01320 SM00387 Histidine kinase-like ATPases BPOF4_RS01325 SM00331 Sigma factor PP2C-like phosphatases BPOF4_RS01325 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BPOF4_RS01345 SM00331 Sigma factor PP2C-like phosphatases BPOF4_RS01350 SM00316 Ribosomal protein S1-like RNA-binding domain BPOF4_RS01350 SM00732 Likely ribonuclease with RNase H fold. BPOF4_RS01355 SM00731 SprT homologues. BPOF4_RS01495 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS01500 SM00881 CoA binding domain BPOF4_RS01560 SM00883 Chaperonin 10 Kd subunit BPOF4_RS01570 SM00450 Rhodanese Homology Domain BPOF4_RS01605 SM00448 cheY-homologous receiver domain BPOF4_RS01610 SM00387 Histidine kinase-like ATPases BPOF4_RS01630 SM00631 BPOF4_RS01630 BPOF4_RS01710 SM00450 Rhodanese Homology Domain BPOF4_RS01715 SM00347 helix_turn_helix multiple antibiotic resistance protein BPOF4_RS01730 SM00954 Region found in RelA / SpoT proteins BPOF4_RS01750 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS01775 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS01785 SM00460 Transglutaminase/protease-like homologues BPOF4_RS01855 SM01001 AIR carboxylase BPOF4_RS01865 SM00998 Adenylosuccinate lyase C-terminus BPOF4_RS01880 SM01211 BPOF4_RS01880 BPOF4_RS01905 SM00798 AICARFT/IMPCHase bienzyme BPOF4_RS01905 SM00851 MGS-like domain BPOF4_RS01910 SM01209 BPOF4_RS01910 BPOF4_RS01910 SM01210 BPOF4_RS01910 BPOF4_RS01940 SM00756 BPOF4_RS01940 BPOF4_RS01950 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BPOF4_RS01970 SM01005 Alanine racemase, C-terminal domain BPOF4_RS01975 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BPOF4_RS01975 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BPOF4_RS01990 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BPOF4_RS02050 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BPOF4_RS02050 SM00292 breast cancer carboxy-terminal domain BPOF4_RS02050 SM00532 Ligase N family BPOF4_RS02065 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS02095 SM00845 GatB domain BPOF4_RS02100 SM00046 Diacylglycerol kinase catalytic domain (presumed) BPOF4_RS02165 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS02170 SM00387 Histidine kinase-like ATPases BPOF4_RS02175 SM00448 cheY-homologous receiver domain BPOF4_RS02175 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS02220 SM00387 Histidine kinase-like ATPases BPOF4_RS02225 SM00421 helix_turn_helix, Lux Regulon BPOF4_RS02225 SM00448 cheY-homologous receiver domain BPOF4_RS02255 SM00448 cheY-homologous receiver domain BPOF4_RS02255 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS02340 SM00796 Allophanate hydrolase subunit 1 BPOF4_RS02345 SM00797 Allophanate hydrolase subunit 2 BPOF4_RS02350 SM00346 helix_turn_helix isocitrate lyase regulation BPOF4_RS02400 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS02415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS02465 SM00257 Lysin motif BPOF4_RS02465 SM00631 BPOF4_RS02465 BPOF4_RS02470 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS02475 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS02480 SM00387 Histidine kinase-like ATPases BPOF4_RS02480 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS02495 SM00363 S4 RNA-binding domain BPOF4_RS02535 SM00642 Alpha-amylase domain BPOF4_RS02540 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS02540 SM00866 BPOF4_RS02540 BPOF4_RS02555 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS02565 SM00420 helix_turn_helix, Deoxyribose operon repressor BPOF4_RS02565 SM01134 BPOF4_RS02565 BPOF4_RS02590 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BPOF4_RS02610 SM00220 Serine/Threonine protein kinases, catalytic domain BPOF4_RS02635 SM01061 CAT RNA binding domain BPOF4_RS02705 SM01060 BPOF4_RS02705 BPOF4_RS02735 SM00344 helix_turn_helix ASNC type BPOF4_RS02755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS02755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS02775 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS02830 SM00855 Phosphoglycerate mutase family BPOF4_RS02835 SM00357 Cold shock protein domain BPOF4_RS02890 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS02900 SM00062 Bacterial periplasmic substrate-binding proteins BPOF4_RS02900 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BPOF4_RS02960 SM00478 endonuclease III BPOF4_RS02960 SM00525 BPOF4_RS02960 BPOF4_RS02975 SM00829 Enoylreductase BPOF4_RS03005 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS03180 SM00450 Rhodanese Homology Domain BPOF4_RS03185 SM00091 PAS domain BPOF4_RS03185 SM00387 Histidine kinase-like ATPases BPOF4_RS03185 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS03190 SM00854 Bacterial capsule synthesis protein PGA_cap BPOF4_RS03210 SM00873 B3/4 domain BPOF4_RS03250 SM00763 PrkA AAA domain BPOF4_RS03275 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS03310 SM01329 BPOF4_RS03310 BPOF4_RS03340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BPOF4_RS03420 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS03425 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS03430 SM00448 cheY-homologous receiver domain BPOF4_RS03430 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS03435 SM00387 Histidine kinase-like ATPases BPOF4_RS03435 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS03455 SM00052 Putative diguanylate phosphodiesterase BPOF4_RS03455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BPOF4_RS03455 SM00091 PAS domain BPOF4_RS03455 SM00267 diguanylate cyclase BPOF4_RS03485 SM00878 Biotin carboxylase C-terminal domain BPOF4_RS03520 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS03575 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS03580 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS03585 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS03610 SM00448 cheY-homologous receiver domain BPOF4_RS03610 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS03615 SM00387 Histidine kinase-like ATPases BPOF4_RS03615 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS03625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS03660 SM00347 helix_turn_helix multiple antibiotic resistance protein BPOF4_RS03705 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS03745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS03745 SM00387 Histidine kinase-like ATPases BPOF4_RS03750 SM00421 helix_turn_helix, Lux Regulon BPOF4_RS03750 SM00448 cheY-homologous receiver domain BPOF4_RS03780 SM00062 Bacterial periplasmic substrate-binding proteins BPOF4_RS03790 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS03820 SM00257 Lysin motif BPOF4_RS03835 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BPOF4_RS03840 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS03860 SM01323 BPOF4_RS03860 BPOF4_RS03930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS03930 SM00954 Region found in RelA / SpoT proteins BPOF4_RS03975 SM00387 Histidine kinase-like ATPases BPOF4_RS03975 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS03980 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS04005 SM00028 Tetratricopeptide repeats BPOF4_RS04010 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS04035 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BPOF4_RS04045 SM00732 Likely ribonuclease with RNase H fold. BPOF4_RS04130 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS04130 SM00895 BPOF4_RS04130 BPOF4_RS04135 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BPOF4_RS04175 SM00487 DEAD-like helicases superfamily BPOF4_RS04175 SM00490 helicase superfamily c-terminal domain BPOF4_RS04205 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS04205 SM01086 C-terminal, D2-small domain, of ClpB protein BPOF4_RS04220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS04235 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BPOF4_RS04260 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BPOF4_RS04265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BPOF4_RS04280 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS04330 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS04395 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS04430 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BPOF4_RS04475 SM00448 cheY-homologous receiver domain BPOF4_RS04475 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS04480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS04480 SM00387 Histidine kinase-like ATPases BPOF4_RS04480 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS04520 SM00450 Rhodanese Homology Domain BPOF4_RS04520 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS04565 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BPOF4_RS04615 SM01240 BPOF4_RS04615 BPOF4_RS04620 SM00422 helix_turn_helix, mercury resistance BPOF4_RS04635 SM00448 cheY-homologous receiver domain BPOF4_RS04640 SM00387 Histidine kinase-like ATPases BPOF4_RS04720 SM00346 helix_turn_helix isocitrate lyase regulation BPOF4_RS04725 SM00346 helix_turn_helix isocitrate lyase regulation BPOF4_RS04740 SM00346 helix_turn_helix isocitrate lyase regulation BPOF4_RS04755 SM00859 Semialdehyde dehydrogenase, NAD binding domain BPOF4_RS04815 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS04815 SM00895 BPOF4_RS04815 BPOF4_RS04865 SM00267 diguanylate cyclase BPOF4_RS04935 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS04935 SM00866 BPOF4_RS04935 BPOF4_RS04965 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BPOF4_RS05030 SM00347 helix_turn_helix multiple antibiotic resistance protein BPOF4_RS05095 SM00387 Histidine kinase-like ATPases BPOF4_RS05095 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS05100 SM00448 cheY-homologous receiver domain BPOF4_RS05100 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS05135 SM00052 Putative diguanylate phosphodiesterase BPOF4_RS05135 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BPOF4_RS05135 SM00267 diguanylate cyclase BPOF4_RS05150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS05150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS05155 SM00091 PAS domain BPOF4_RS05155 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS05165 SM00387 Histidine kinase-like ATPases BPOF4_RS05170 SM00448 cheY-homologous receiver domain BPOF4_RS05170 SM00850 LytTr DNA-binding domain BPOF4_RS05180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS05190 SM00331 Sigma factor PP2C-like phosphatases BPOF4_RS05195 SM01245 BPOF4_RS05195 BPOF4_RS05205 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BPOF4_RS05205 SM00387 Histidine kinase-like ATPases BPOF4_RS05205 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS05210 SM00014 Acid phosphatase homologues BPOF4_RS05230 SM01131 BPOF4_RS05230 BPOF4_RS05250 SM00098 Alkaline phosphatase homologues BPOF4_RS05270 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS05285 SM00411 bacterial (prokaryotic) histone like domain BPOF4_RS05360 SM01103 BPOF4_RS05360 BPOF4_RS05370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS05380 SM00316 Ribosomal protein S1-like RNA-binding domain BPOF4_RS05400 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BPOF4_RS05410 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS05445 SM00838 Elongation factor G C-terminus BPOF4_RS05450 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS05470 SM00271 DnaJ molecular chaperone homology domain BPOF4_RS05485 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS05490 SM01133 BPOF4_RS05490 BPOF4_RS05535 SM00822 BPOF4_RS05535 BPOF4_RS05550 SM00450 Rhodanese Homology Domain BPOF4_RS05550 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS05565 SM00450 Rhodanese Homology Domain BPOF4_RS05585 SM00947 Carbonic anhydrase BPOF4_RS05595 SM00450 Rhodanese Homology Domain BPOF4_RS05650 SM00822 BPOF4_RS05650 BPOF4_RS05700 SM00829 Enoylreductase BPOF4_RS05715 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS05720 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS05770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS05815 SM00116 Domain in cystathionine beta-synthase and other proteins. BPOF4_RS05830 SM00400 zinc finger BPOF4_RS05830 SM00493 BPOF4_RS05830 BPOF4_RS05865 SM01058 CarD-like/TRCF domain BPOF4_RS05875 SM00487 DEAD-like helicases superfamily BPOF4_RS05875 SM00490 helicase superfamily c-terminal domain BPOF4_RS05880 SM00518 AP endonuclease family 2 BPOF4_RS05890 SM00387 Histidine kinase-like ATPases BPOF4_RS05890 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS05895 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS05920 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS06105 SM00028 Tetratricopeptide repeats BPOF4_RS06175 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS06230 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS06235 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS06315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS06315 SM00387 Histidine kinase-like ATPases BPOF4_RS06315 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS06320 SM00448 cheY-homologous receiver domain BPOF4_RS06320 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS06375 SM00062 Bacterial periplasmic substrate-binding proteins BPOF4_RS06375 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BPOF4_RS06385 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS06520 SM00422 helix_turn_helix, mercury resistance BPOF4_RS06575 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BPOF4_RS06615 SM00267 diguanylate cyclase BPOF4_RS06615 SM00448 cheY-homologous receiver domain BPOF4_RS06630 SM00448 cheY-homologous receiver domain BPOF4_RS06635 SM00387 Histidine kinase-like ATPases BPOF4_RS06635 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS06635 SM00448 cheY-homologous receiver domain BPOF4_RS06640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS06670 SM00563 Phosphate acyltransferases BPOF4_RS06710 SM01061 CAT RNA binding domain BPOF4_RS06775 SM01007 Class II Aldolase and Adducin N-terminal domain BPOF4_RS06860 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BPOF4_RS06905 SM00936 Penicillin-binding protein 5, C-terminal domain BPOF4_RS06915 SM00387 Histidine kinase-like ATPases BPOF4_RS06985 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS06990 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS07125 SM00363 S4 RNA-binding domain BPOF4_RS07145 SM00448 cheY-homologous receiver domain BPOF4_RS07145 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS07150 SM00091 PAS domain BPOF4_RS07150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS07150 SM00387 Histidine kinase-like ATPases BPOF4_RS07150 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS07155 SM00347 helix_turn_helix multiple antibiotic resistance protein BPOF4_RS07185 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS07250 SM00257 Lysin motif BPOF4_RS07270 SM00257 Lysin motif BPOF4_RS07270 SM00631 BPOF4_RS07270 BPOF4_RS07285 SM00487 DEAD-like helicases superfamily BPOF4_RS07285 SM00490 helicase superfamily c-terminal domain BPOF4_RS07335 SM00422 helix_turn_helix, mercury resistance BPOF4_RS07350 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BPOF4_RS07360 SM00870 BPOF4_RS07360 BPOF4_RS07380 SM01018 B12 binding domain BPOF4_RS07405 SM00563 Phosphate acyltransferases BPOF4_RS07410 SM00316 Ribosomal protein S1-like RNA-binding domain BPOF4_RS07415 SM01240 BPOF4_RS07415 BPOF4_RS07430 SM01207 BPOF4_RS07430 BPOF4_RS07495 SM00562 BPOF4_RS07495 BPOF4_RS07500 SM00138 Methyltransferase, chemotaxis proteins BPOF4_RS07570 SM00028 Tetratricopeptide repeats BPOF4_RS07575 SM00914 BPOF4_RS07575 BPOF4_RS07630 SM00851 MGS-like domain BPOF4_RS07675 SM00028 Tetratricopeptide repeats BPOF4_RS07680 SM00479 BPOF4_RS07680 BPOF4_RS07680 SM00487 DEAD-like helicases superfamily BPOF4_RS07680 SM00491 BPOF4_RS07680 BPOF4_RS07715 SM00478 endonuclease III BPOF4_RS07715 SM00525 BPOF4_RS07715 BPOF4_RS07735 SM00060 Fibronectin type 3 domain BPOF4_RS07760 SM00450 Rhodanese Homology Domain BPOF4_RS07780 SM00260 Two component signalling adaptor domain BPOF4_RS07780 SM00448 cheY-homologous receiver domain BPOF4_RS07820 SM00567 E-Z type HEAT repeats BPOF4_RS07820 SM00932 Scaffold protein Nfu/NifU N terminal BPOF4_RS07845 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS07895 SM01298 BPOF4_RS07895 BPOF4_RS07930 SM01130 BPOF4_RS07930 BPOF4_RS07955 SM00357 Cold shock protein domain BPOF4_RS07965 SM00357 Cold shock protein domain BPOF4_RS07970 SM00422 helix_turn_helix, mercury resistance BPOF4_RS07995 SM00938 Nitrogen regulatory protein P-II BPOF4_RS08010 SM00487 DEAD-like helicases superfamily BPOF4_RS08010 SM00490 helicase superfamily c-terminal domain BPOF4_RS08040 SM00981 BPOF4_RS08040 BPOF4_RS08100 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS08105 SM00882 Coenzyme A transferase BPOF4_RS08115 SM00822 BPOF4_RS08115 BPOF4_RS08125 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS08140 SM00881 CoA binding domain BPOF4_RS08150 SM00387 Histidine kinase-like ATPases BPOF4_RS08150 SM00433 TopoisomeraseII BPOF4_RS08155 SM00434 DNA Topoisomerase IV BPOF4_RS08185 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS08205 SM00855 Phosphoglycerate mutase family BPOF4_RS08235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BPOF4_RS08235 SM00091 PAS domain BPOF4_RS08235 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS08250 SM01266 BPOF4_RS08250 BPOF4_RS08285 SM01006 Siderophore biosynthesis protein domain BPOF4_RS08490 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS08540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BPOF4_RS08545 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS08550 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS08635 SM00342 helix_turn_helix, arabinose operon control protein BPOF4_RS08680 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BPOF4_RS08700 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS08710 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS08785 SM01091 Transporter associated domain BPOF4_RS08800 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS08810 SM00116 Domain in cystathionine beta-synthase and other proteins. BPOF4_RS08810 SM01091 Transporter associated domain BPOF4_RS08830 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS08835 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS08860 SM00833 Cobalamin synthesis protein cobW C-terminal domain BPOF4_RS08885 SM00422 helix_turn_helix, mercury resistance BPOF4_RS08895 SM00465 GIY-YIG type nucleases (URI domain) BPOF4_RS08900 SM00357 Cold shock protein domain BPOF4_RS08920 SM00422 helix_turn_helix, mercury resistance BPOF4_RS08945 SM00860 SMI1 / KNR4 family BPOF4_RS08980 SM01058 CarD-like/TRCF domain BPOF4_RS09035 SM00490 helicase superfamily c-terminal domain BPOF4_RS09055 SM00487 DEAD-like helicases superfamily BPOF4_RS09085 SM00974 BPOF4_RS09085 BPOF4_RS09090 SM00487 DEAD-like helicases superfamily BPOF4_RS09090 SM00490 helicase superfamily c-terminal domain BPOF4_RS09110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS09120 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS09140 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS09170 SM00860 SMI1 / KNR4 family BPOF4_RS09180 SM00860 SMI1 / KNR4 family BPOF4_RS09190 SM00860 SMI1 / KNR4 family BPOF4_RS09235 SM00091 PAS domain BPOF4_RS09320 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS09370 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BPOF4_RS09375 SM01057 Eukaryotic-type carbonic anhydrase BPOF4_RS09425 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS09440 SM00342 helix_turn_helix, arabinose operon control protein BPOF4_RS09440 SM00871 Bacterial transcription activator, effector binding domain BPOF4_RS09485 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS09505 SM00829 Enoylreductase BPOF4_RS09520 SM01022 BPOF4_RS09520 BPOF4_RS09610 SM00344 helix_turn_helix ASNC type BPOF4_RS09655 SM00327 von Willebrand factor (vWF) type A domain BPOF4_RS09670 SM01091 Transporter associated domain BPOF4_RS09705 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS09710 SM00421 helix_turn_helix, Lux Regulon BPOF4_RS09710 SM00448 cheY-homologous receiver domain BPOF4_RS09800 SM00646 BPOF4_RS09800 BPOF4_RS09850 SM00354 helix_turn _helix lactose operon repressor BPOF4_RS09915 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS09970 SM00919 Malic enzyme, NAD binding domain BPOF4_RS09970 SM01274 BPOF4_RS09970 BPOF4_RS09980 SM00091 PAS domain BPOF4_RS09980 SM00387 Histidine kinase-like ATPases BPOF4_RS10120 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS10185 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS10185 SM00866 BPOF4_RS10185 BPOF4_RS10255 SM00257 Lysin motif BPOF4_RS10255 SM00636 BPOF4_RS10255 BPOF4_RS10270 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BPOF4_RS10280 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS10285 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS10290 SM00487 DEAD-like helicases superfamily BPOF4_RS10290 SM00490 helicase superfamily c-terminal domain BPOF4_RS10310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS10310 SM00387 Histidine kinase-like ATPases BPOF4_RS10310 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS10315 SM00448 cheY-homologous receiver domain BPOF4_RS10315 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS10335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS10340 SM00822 BPOF4_RS10340 BPOF4_RS10365 SM00257 Lysin motif BPOF4_RS10425 SM00882 Coenzyme A transferase BPOF4_RS10430 SM00882 Coenzyme A transferase BPOF4_RS10455 SM00091 PAS domain BPOF4_RS10455 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS10460 SM00631 BPOF4_RS10460 BPOF4_RS10470 SM00491 BPOF4_RS10470 BPOF4_RS10475 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BPOF4_RS10520 SM00046 Diacylglycerol kinase catalytic domain (presumed) BPOF4_RS10535 SM00829 Enoylreductase BPOF4_RS10555 SM00704 CDGSH-type zinc finger. Function unknown. BPOF4_RS10625 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BPOF4_RS10625 SM00475 5'-3' exonuclease BPOF4_RS10640 SM00493 BPOF4_RS10640 BPOF4_RS10685 SM00341 Helicase and RNase D C-terminal BPOF4_RS10685 SM00487 DEAD-like helicases superfamily BPOF4_RS10685 SM00490 helicase superfamily c-terminal domain BPOF4_RS10685 SM00956 BPOF4_RS10685 BPOF4_RS10695 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS10735 SM00861 Transketolase, pyrimidine binding domain BPOF4_RS10895 SM00260 Two component signalling adaptor domain BPOF4_RS10895 SM00448 cheY-homologous receiver domain BPOF4_RS10940 SM00052 Putative diguanylate phosphodiesterase BPOF4_RS10950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS10950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS10965 SM00481 DNA polymerase alpha chain like domain BPOF4_RS11000 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11050 SM00347 helix_turn_helix multiple antibiotic resistance protein BPOF4_RS11095 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11160 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BPOF4_RS11160 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BPOF4_RS11180 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11185 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11200 SM00861 Transketolase, pyrimidine binding domain BPOF4_RS11210 SM00857 Resolvase, N terminal domain BPOF4_RS11240 SM01230 BPOF4_RS11240 BPOF4_RS11245 SM00422 helix_turn_helix, mercury resistance BPOF4_RS11260 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11285 SM00853 MutL C terminal dimerisation domain BPOF4_RS11285 SM01340 BPOF4_RS11285 BPOF4_RS11290 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BPOF4_RS11290 SM00534 ATPase domain of DNA mismatch repair MUTS family BPOF4_RS11305 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS11330 SM00322 K homology RNA-binding domain BPOF4_RS11330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS11355 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11360 SM00487 DEAD-like helicases superfamily BPOF4_RS11360 SM00490 helicase superfamily c-terminal domain BPOF4_RS11365 SM00852 Probable molybdopterin binding domain BPOF4_RS11380 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS11410 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS11410 SM00866 BPOF4_RS11410 BPOF4_RS11415 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11415 SM00843 BPOF4_RS11415 BPOF4_RS11430 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS11435 SM01130 BPOF4_RS11435 BPOF4_RS11445 SM00859 Semialdehyde dehydrogenase, NAD binding domain BPOF4_RS11475 SM00316 Ribosomal protein S1-like RNA-binding domain BPOF4_RS11475 SM00322 K homology RNA-binding domain BPOF4_RS11480 SM01387 BPOF4_RS11480 BPOF4_RS11485 SM00904 Riboflavin kinase BPOF4_RS11520 SM00316 Ribosomal protein S1-like RNA-binding domain BPOF4_RS11520 SM00322 K homology RNA-binding domain BPOF4_RS11530 SM00479 BPOF4_RS11530 BPOF4_RS11530 SM00481 DNA polymerase alpha chain like domain BPOF4_RS11540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BPOF4_RS11610 SM00448 cheY-homologous receiver domain BPOF4_RS11620 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11620 SM00962 SRP54-type protein, GTPase domain BPOF4_RS11655 SM00448 cheY-homologous receiver domain BPOF4_RS11710 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11750 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11750 SM01086 C-terminal, D2-small domain, of ClpB protein BPOF4_RS11770 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BPOF4_RS11770 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BPOF4_RS11770 SM00493 BPOF4_RS11770 BPOF4_RS11780 SM00881 CoA binding domain BPOF4_RS11845 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11845 SM00962 SRP54-type protein, GTPase domain BPOF4_RS11845 SM00963 SRP54-type protein, helical bundle domain BPOF4_RS11855 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS11855 SM00962 SRP54-type protein, GTPase domain BPOF4_RS11855 SM00963 SRP54-type protein, helical bundle domain BPOF4_RS11860 SM00968 SMC proteins Flexible Hinge Domain BPOF4_RS11870 SM00358 Double-stranded RNA binding motif BPOF4_RS11870 SM00535 Ribonuclease III family BPOF4_RS11875 SM00823 Phosphopantetheine attachment site BPOF4_RS11880 SM00822 BPOF4_RS11880 BPOF4_RS11885 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BPOF4_RS11900 SM00487 DEAD-like helicases superfamily BPOF4_RS11900 SM00490 helicase superfamily c-terminal domain BPOF4_RS11920 SM01120 BPOF4_RS11920 BPOF4_RS11920 SM01121 BPOF4_RS11920 BPOF4_RS11950 SM00220 Serine/Threonine protein kinases, catalytic domain BPOF4_RS11950 SM00740 BPOF4_RS11950 BPOF4_RS11955 SM00331 Sigma factor PP2C-like phosphatases BPOF4_RS11955 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BPOF4_RS11970 SM00487 DEAD-like helicases superfamily BPOF4_RS11970 SM00490 helicase superfamily c-terminal domain BPOF4_RS11980 SM01409 BPOF4_RS11980 BPOF4_RS11985 SM00072 Guanylate kinase homologues. BPOF4_RS12000 SM00831 Cation transporter/ATPase, N-terminus BPOF4_RS12010 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS12040 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BPOF4_RS12055 SM00851 MGS-like domain BPOF4_RS12055 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BPOF4_RS12060 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BPOF4_RS12085 SM00363 S4 RNA-binding domain BPOF4_RS12110 SM00363 S4 RNA-binding domain BPOF4_RS12155 SM00864 Tubulin/FtsZ family, GTPase domain BPOF4_RS12155 SM00865 Tubulin/FtsZ family, C-terminal domain BPOF4_RS12160 SM00842 Cell division protein FtsA BPOF4_RS12220 SM00740 BPOF4_RS12220 BPOF4_RS12225 SM00740 BPOF4_RS12225 BPOF4_RS12290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BPOF4_RS12440 SM00878 Biotin carboxylase C-terminal domain BPOF4_RS12465 SM00670 Large family of predicted nucleotide-binding domains BPOF4_RS12485 SM00838 Elongation factor G C-terminus BPOF4_RS12570 SM00861 Transketolase, pyrimidine binding domain BPOF4_RS12600 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS12660 SM01350 BPOF4_RS12660 BPOF4_RS12705 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS12705 SM00876 Biotin and Thiamin Synthesis associated domain BPOF4_RS12760 SM00450 Rhodanese Homology Domain BPOF4_RS12760 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS12775 SM00450 Rhodanese Homology Domain BPOF4_RS12795 SM01117 BPOF4_RS12795 BPOF4_RS12860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BPOF4_RS12860 SM00091 PAS domain BPOF4_RS12860 SM00387 Histidine kinase-like ATPases BPOF4_RS12860 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS12910 SM00861 Transketolase, pyrimidine binding domain BPOF4_RS12925 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BPOF4_RS12930 SM00091 PAS domain BPOF4_RS12930 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS12955 SM00448 cheY-homologous receiver domain BPOF4_RS12970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BPOF4_RS12985 SM00363 S4 RNA-binding domain BPOF4_RS12990 SM00861 Transketolase, pyrimidine binding domain BPOF4_RS13030 SM00878 Biotin carboxylase C-terminal domain BPOF4_RS13080 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS13090 SM00841 Elongation factor P, C-terminal BPOF4_RS13090 SM01185 BPOF4_RS13090 BPOF4_RS13120 SM00529 Helix-turn-helix diphteria tox regulatory element BPOF4_RS13145 SM00450 Rhodanese Homology Domain BPOF4_RS13165 SM00487 DEAD-like helicases superfamily BPOF4_RS13165 SM00490 helicase superfamily c-terminal domain BPOF4_RS13180 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS13225 SM01234 BPOF4_RS13225 BPOF4_RS13345 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS13415 SM00954 Region found in RelA / SpoT proteins BPOF4_RS13425 SM01118 BPOF4_RS13425 BPOF4_RS13435 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BPOF4_RS13460 SM00155 Phospholipase D. Active site motifs. BPOF4_RS13500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS13515 SM00046 Diacylglycerol kinase catalytic domain (presumed) BPOF4_RS13525 SM01007 Class II Aldolase and Adducin N-terminal domain BPOF4_RS13560 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BPOF4_RS13560 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BPOF4_RS13560 SM00493 BPOF4_RS13560 BPOF4_RS13575 SM00347 helix_turn_helix multiple antibiotic resistance protein BPOF4_RS13600 SM00257 Lysin motif BPOF4_RS13610 SM00116 Domain in cystathionine beta-synthase and other proteins. BPOF4_RS13625 SM00825 Beta-ketoacyl synthase BPOF4_RS13700 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BPOF4_RS13700 SM01209 BPOF4_RS13700 BPOF4_RS13705 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BPOF4_RS13725 SM00859 Semialdehyde dehydrogenase, NAD binding domain BPOF4_RS13775 SM00448 cheY-homologous receiver domain BPOF4_RS13775 SM00850 LytTr DNA-binding domain BPOF4_RS13780 SM00387 Histidine kinase-like ATPases BPOF4_RS13785 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS13805 SM00487 DEAD-like helicases superfamily BPOF4_RS13805 SM00490 helicase superfamily c-terminal domain BPOF4_RS13840 SM00450 Rhodanese Homology Domain BPOF4_RS13850 SM00354 helix_turn _helix lactose operon repressor BPOF4_RS13870 SM00642 Alpha-amylase domain BPOF4_RS13875 SM00642 Alpha-amylase domain BPOF4_RS13885 SM00909 Sporulation and spore germination BPOF4_RS13935 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS13935 SM00448 cheY-homologous receiver domain BPOF4_RS13940 SM00062 Bacterial periplasmic substrate-binding proteins BPOF4_RS13940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BPOF4_RS13940 SM00387 Histidine kinase-like ATPases BPOF4_RS13940 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS13945 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS13955 SM00052 Putative diguanylate phosphodiesterase BPOF4_RS14000 SM00833 Cobalamin synthesis protein cobW C-terminal domain BPOF4_RS14010 SM00914 BPOF4_RS14010 BPOF4_RS14030 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS14035 SM00448 cheY-homologous receiver domain BPOF4_RS14040 SM00260 Two component signalling adaptor domain BPOF4_RS14045 SM00073 Histidine Phosphotransfer domain BPOF4_RS14045 SM00260 Two component signalling adaptor domain BPOF4_RS14045 SM00387 Histidine kinase-like ATPases BPOF4_RS14045 SM01231 BPOF4_RS14045 BPOF4_RS14050 SM00052 Putative diguanylate phosphodiesterase BPOF4_RS14050 SM00267 diguanylate cyclase BPOF4_RS14065 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS14115 SM00091 PAS domain BPOF4_RS14115 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS14135 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS14155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS14155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS14175 SM00116 Domain in cystathionine beta-synthase and other proteins. BPOF4_RS14175 SM00924 MgtE intracellular N domain BPOF4_RS14180 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS14190 SM00226 Low molecular weight phosphatase family BPOF4_RS14200 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BPOF4_RS14205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BPOF4_RS14220 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS14250 SM00316 Ribosomal protein S1-like RNA-binding domain BPOF4_RS14290 SM00852 Probable molybdopterin binding domain BPOF4_RS14295 SM00852 Probable molybdopterin binding domain BPOF4_RS14380 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS14425 SM00257 Lysin motif BPOF4_RS14435 SM01004 Delta-aminolevulinic acid dehydratase BPOF4_RS14470 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS14470 SM00464 Found in ATP-dependent protease La (LON) BPOF4_RS14475 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS14480 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS14480 SM00994 ClpX C4-type zinc finger BPOF4_RS14480 SM01086 C-terminal, D2-small domain, of ClpB protein BPOF4_RS14495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS14510 SM01329 BPOF4_RS14510 BPOF4_RS14515 SM00917 LeuA allosteric (dimerisation) domain BPOF4_RS14575 SM00909 Sporulation and spore germination BPOF4_RS14585 SM00347 helix_turn_helix multiple antibiotic resistance protein BPOF4_RS14600 SM01061 CAT RNA binding domain BPOF4_RS14605 SM00421 helix_turn_helix, Lux Regulon BPOF4_RS14645 SM00465 GIY-YIG type nucleases (URI domain) BPOF4_RS14655 SM00893 Electron transfer flavoprotein domain BPOF4_RS14660 SM00893 Electron transfer flavoprotein domain BPOF4_RS14690 SM00463 Small MutS-related domain BPOF4_RS14690 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BPOF4_RS14690 SM00534 ATPase domain of DNA mismatch repair MUTS family BPOF4_RS14695 SM00481 DNA polymerase alpha chain like domain BPOF4_RS14695 SM00483 DNA polymerase X family BPOF4_RS14715 SM00873 B3/4 domain BPOF4_RS14715 SM00874 tRNA synthetase B5 domain BPOF4_RS14715 SM00896 Ferredoxin-fold anticodon binding domain BPOF4_RS14725 SM00967 RNA 2'-O ribose methyltransferase substrate binding BPOF4_RS14775 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BPOF4_RS14785 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS14790 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS14815 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BPOF4_RS14830 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BPOF4_RS14830 SM01232 BPOF4_RS14830 BPOF4_RS14835 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BPOF4_RS14835 SM00474 3'-5' exonuclease BPOF4_RS14835 SM00475 5'-3' exonuclease BPOF4_RS14835 SM00482 DNA polymerase A domain BPOF4_RS14840 SM00244 prohibitin homologues BPOF4_RS14845 SM00244 prohibitin homologues BPOF4_RS14850 SM00091 PAS domain BPOF4_RS14850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS14850 SM00387 Histidine kinase-like ATPases BPOF4_RS14850 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS14855 SM00448 cheY-homologous receiver domain BPOF4_RS14855 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS14865 SM01329 BPOF4_RS14865 BPOF4_RS14905 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS14905 SM00895 BPOF4_RS14905 BPOF4_RS14910 SM00919 Malic enzyme, NAD binding domain BPOF4_RS14910 SM01274 BPOF4_RS14910 BPOF4_RS14915 SM00481 DNA polymerase alpha chain like domain BPOF4_RS14945 SM00116 Domain in cystathionine beta-synthase and other proteins. BPOF4_RS14955 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS15055 SM00981 BPOF4_RS15055 BPOF4_RS15085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BPOF4_RS15090 SM00267 diguanylate cyclase BPOF4_RS15095 SM00363 S4 RNA-binding domain BPOF4_RS15095 SM01390 BPOF4_RS15095 BPOF4_RS15120 SM00255 Toll - interleukin 1 - resistance BPOF4_RS15160 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS15220 SM00855 Phosphoglycerate mutase family BPOF4_RS15225 SM00487 DEAD-like helicases superfamily BPOF4_RS15280 SM00363 S4 RNA-binding domain BPOF4_RS15300 SM00116 Domain in cystathionine beta-synthase and other proteins. BPOF4_RS15325 SM00354 helix_turn _helix lactose operon repressor BPOF4_RS15330 SM00830 Chorismate mutase type II BPOF4_RS15375 SM00843 BPOF4_RS15375 BPOF4_RS15415 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS15445 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS15450 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS15465 SM00028 Tetratricopeptide repeats BPOF4_RS15465 SM01043 Bacterial transcriptional activator domain BPOF4_RS15530 SM00420 helix_turn_helix, Deoxyribose operon repressor BPOF4_RS15535 SM00363 S4 RNA-binding domain BPOF4_RS15575 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS15585 SM00947 Carbonic anhydrase BPOF4_RS15610 SM00014 Acid phosphatase homologues BPOF4_RS15650 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS15700 SM00642 Alpha-amylase domain BPOF4_RS15710 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS15760 SM00421 helix_turn_helix, Lux Regulon BPOF4_RS15760 SM00448 cheY-homologous receiver domain BPOF4_RS15765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BPOF4_RS15785 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS15840 SM00354 helix_turn _helix lactose operon repressor BPOF4_RS15850 SM00116 Domain in cystathionine beta-synthase and other proteins. BPOF4_RS15865 SM00857 Resolvase, N terminal domain BPOF4_RS15925 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS15950 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS16035 SM00316 Ribosomal protein S1-like RNA-binding domain BPOF4_RS16040 SM00487 DEAD-like helicases superfamily BPOF4_RS16040 SM00490 helicase superfamily c-terminal domain BPOF4_RS16065 SM00344 helix_turn_helix ASNC type BPOF4_RS16080 SM00642 Alpha-amylase domain BPOF4_RS16105 SM00411 bacterial (prokaryotic) histone like domain BPOF4_RS16205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS16205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS16250 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS16330 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BPOF4_RS16330 SM00420 helix_turn_helix, Deoxyribose operon repressor BPOF4_RS16380 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS16415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS16460 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS16480 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS16480 SM00930 BPOF4_RS16480 BPOF4_RS16550 SM00345 helix_turn_helix gluconate operon transcriptional repressor BPOF4_RS16555 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS16635 SM00316 Ribosomal protein S1-like RNA-binding domain BPOF4_RS16635 SM00357 Cold shock protein domain BPOF4_RS16635 SM00955 BPOF4_RS16635 BPOF4_RS16655 SM01192 BPOF4_RS16655 BPOF4_RS16655 SM01193 BPOF4_RS16655 BPOF4_RS16675 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BPOF4_RS16730 SM00028 Tetratricopeptide repeats BPOF4_RS16820 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS16825 SM00487 DEAD-like helicases superfamily BPOF4_RS16825 SM00490 helicase superfamily c-terminal domain BPOF4_RS16835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BPOF4_RS16840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BPOF4_RS16840 SM00245 tail specific protease BPOF4_RS16850 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BPOF4_RS16870 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS16885 SM00937 BPOF4_RS16885 BPOF4_RS16890 SM00957 SecA DEAD-like domain BPOF4_RS16890 SM00958 SecA preprotein cross-linking domain BPOF4_RS16895 SM00091 PAS domain BPOF4_RS16895 SM00387 Histidine kinase-like ATPases BPOF4_RS16900 SM00448 cheY-homologous receiver domain BPOF4_RS16920 SM00357 Cold shock protein domain BPOF4_RS17000 SM00421 helix_turn_helix, Lux Regulon BPOF4_RS17055 SM00487 DEAD-like helicases superfamily BPOF4_RS17055 SM00490 helicase superfamily c-terminal domain BPOF4_RS17065 SM00421 helix_turn_helix, Lux Regulon BPOF4_RS17065 SM00448 cheY-homologous receiver domain BPOF4_RS17070 SM00387 Histidine kinase-like ATPases BPOF4_RS17085 SM00344 helix_turn_helix ASNC type BPOF4_RS17105 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS17110 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS17130 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS17135 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS17170 SM00957 SecA DEAD-like domain BPOF4_RS17170 SM00958 SecA preprotein cross-linking domain BPOF4_RS17185 SM00047 Lysozyme subfamily 2 BPOF4_RS17235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS17235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS17245 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS17355 SM00860 SMI1 / KNR4 family BPOF4_RS17530 SM00448 cheY-homologous receiver domain BPOF4_RS17530 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS17535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS17535 SM00387 Histidine kinase-like ATPases BPOF4_RS17535 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS17620 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS17670 SM00354 helix_turn _helix lactose operon repressor BPOF4_RS17690 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS17705 SM00530 Helix-turn-helix XRE-family like proteins BPOF4_RS17715 SM01321 BPOF4_RS17715 BPOF4_RS17765 SM01321 BPOF4_RS17765 BPOF4_RS17825 SM00984 UDP binding domain BPOF4_RS17855 SM00984 UDP binding domain BPOF4_RS17930 SM00854 Bacterial capsule synthesis protein PGA_cap BPOF4_RS17945 SM00642 Alpha-amylase domain BPOF4_RS17950 SM00100 Cyclic nucleotide-monophosphate binding domain BPOF4_RS17950 SM00419 helix_turn_helix, cAMP Regulatory protein BPOF4_RS17970 SM00829 Enoylreductase BPOF4_RS18040 SM00479 BPOF4_RS18040 BPOF4_RS18045 SM00116 Domain in cystathionine beta-synthase and other proteins. BPOF4_RS18110 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS18185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS18185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS18190 SM00226 Low molecular weight phosphatase family BPOF4_RS18220 SM00937 BPOF4_RS18220 BPOF4_RS18230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS18230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS18230 SM01049 BPOF4_RS18230 BPOF4_RS18250 SM00357 Cold shock protein domain BPOF4_RS18250 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS18250 SM00959 Rho termination factor, N-terminal domain BPOF4_RS18275 SM00448 cheY-homologous receiver domain BPOF4_RS18330 SM00155 Phospholipase D. Active site motifs. BPOF4_RS18365 SM00836 DALR anticodon binding domain BPOF4_RS18365 SM01016 Arginyl tRNA synthetase N terminal dom BPOF4_RS18400 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BPOF4_RS18405 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS18435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BPOF4_RS18475 SM00052 Putative diguanylate phosphodiesterase BPOF4_RS18475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BPOF4_RS18475 SM00091 PAS domain BPOF4_RS18475 SM00267 diguanylate cyclase BPOF4_RS18480 SM00344 helix_turn_helix ASNC type BPOF4_RS18525 SM00422 helix_turn_helix, mercury resistance BPOF4_RS18530 SM00479 BPOF4_RS18530 BPOF4_RS18570 SM00986 Uracil DNA glycosylase superfamily BPOF4_RS18570 SM00987 UreE urease accessory protein, C-terminal domain BPOF4_RS18595 SM00640 Glycosyl hydrolases family 32 BPOF4_RS18620 SM01230 BPOF4_RS18620 BPOF4_RS18640 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS18655 SM00487 DEAD-like helicases superfamily BPOF4_RS18655 SM00490 helicase superfamily c-terminal domain BPOF4_RS18660 SM00642 Alpha-amylase domain BPOF4_RS18700 SM00903 Flavin reductase like domain BPOF4_RS18730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BPOF4_RS18730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS18735 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BPOF4_RS18735 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BPOF4_RS18735 SM00493 BPOF4_RS18735 BPOF4_RS18765 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BPOF4_RS18785 SM00052 Putative diguanylate phosphodiesterase BPOF4_RS18785 SM00267 diguanylate cyclase BPOF4_RS18840 SM01060 BPOF4_RS18840 BPOF4_RS18900 SM00382 ATPases associated with a variety of cellular activities BPOF4_RS18930 SM00729 Elongator protein 3, MiaB family, Radical SAM BPOF4_RS18935 SM00091 PAS domain BPOF4_RS18935 SM00387 Histidine kinase-like ATPases BPOF4_RS18935 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS19035 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BPOF4_RS19040 SM00849 Metallo-beta-lactamase superfamily BPOF4_RS19055 SM00091 PAS domain BPOF4_RS19055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS19055 SM00387 Histidine kinase-like ATPases BPOF4_RS19055 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS19060 SM00448 cheY-homologous receiver domain BPOF4_RS19060 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS19090 SM00788 Adenylosuccinate synthetase BPOF4_RS19105 SM00267 diguanylate cyclase BPOF4_RS19160 SM00470 ParB-like nuclease domain BPOF4_RS19170 SM00470 ParB-like nuclease domain BPOF4_RS19180 SM01228 BPOF4_RS19180 BPOF4_RS19190 SM00393 Putative single-stranded nucleic acids-binding domain BPOF4_RS19190 SM01245 BPOF4_RS19190 BPOF4_RS19225 SM00480 DNA polymerase III beta subunit BPOF4_RS20570 SM00434 DNA Topoisomerase IV BPOF4_RS20630 SM01240 BPOF4_RS20630 BPOF4_RS21055 SM00342 helix_turn_helix, arabinose operon control protein BPOF4_RS21060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BPOF4_RS21060 SM00387 Histidine kinase-like ATPases BPOF4_RS21060 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS21075 SM00091 PAS domain BPOF4_RS21075 SM00267 diguanylate cyclase BPOF4_RS21095 SM01317 BPOF4_RS21095 BPOF4_RS21115 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BPOF4_RS21130 SM00014 Acid phosphatase homologues BPOF4_RS21135 SM00862 Transcriptional regulatory protein, C terminal BPOF4_RS21155 SM00091 PAS domain BPOF4_RS21155 SM00387 Histidine kinase-like ATPases BPOF4_RS21155 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS21205 SM00387 Histidine kinase-like ATPases BPOF4_RS21205 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS21210 SM00387 Histidine kinase-like ATPases BPOF4_RS21210 SM00388 His Kinase A (phosphoacceptor) domain BPOF4_RS21275 SM00267 diguanylate cyclase BPOF4_RS21290 SM00287 Bacterial SH3 domain homologues BPOF4_RS21290 SM00646 BPOF4_RS21290 BPOF4_RS21295 SM00631 BPOF4_RS21295 BPOF4_RS21315 SM00287 Bacterial SH3 domain homologues BPOF4_RS21315 SM00646 BPOF4_RS21315