AKO66_RS00015	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS00025	SM00905	Dihydroneopterin aldolase
AKO66_RS00070	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS00080	SM00977	TilS substrate C-terminal domain
AKO66_RS00085	SM00220	Serine/Threonine protein kinases, catalytic domain
AKO66_RS00095	SM00331	Sigma factor PP2C-like phosphatases
AKO66_RS00095	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AKO66_RS00110	SM00316	Ribosomal protein S1-like RNA-binding domain
AKO66_RS00130	SM00363	S4 RNA-binding domain
AKO66_RS00145	SM00966	SpoVT / AbrB like domain 
AKO66_RS00150	SM00487	DEAD-like helicases superfamily
AKO66_RS00150	SM00490	helicase superfamily c-terminal domain
AKO66_RS00150	SM00982	AKO66_RS00150
AKO66_RS00150	SM01058	CarD-like/TRCF domain
AKO66_RS00170	SM01400	AKO66_RS00170
AKO66_RS00215	SM00650	Ribosomal RNA adenine dimethylases
AKO66_RS00220	SM00493	AKO66_RS00220
AKO66_RS00225	SM01208	AKO66_RS00225
AKO66_RS00240	SM00966	SpoVT / AbrB like domain 
AKO66_RS00250	SM00465	GIY-YIG type nucleases (URI domain)
AKO66_RS00345	SM00493	AKO66_RS00345
AKO66_RS00355	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS00375	SM00257	Lysin motif
AKO66_RS00375	SM00636	AKO66_RS00375
AKO66_RS00395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS00415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS00420	SM00936	Penicillin-binding protein 5, C-terminal domain 
AKO66_RS00425	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKO66_RS00425	SM01240	AKO66_RS00425
AKO66_RS00460	SM00434	DNA Topoisomerase IV
AKO66_RS00465	SM00387	Histidine kinase-like ATPases
AKO66_RS00465	SM00433	TopoisomeraseII
AKO66_RS00485	SM00480	DNA polymerase III beta subunit
AKO66_RS00490	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS00490	SM00760	Bacterial dnaA protein helix-turn-helix domain
AKO66_RS00510	SM00393	Putative single-stranded nucleic acids-binding domain
AKO66_RS00510	SM01245	AKO66_RS00510
AKO66_RS00520	SM01228	AKO66_RS00520
AKO66_RS00530	SM00470	ParB-like nuclease domain
AKO66_RS00545	SM00470	ParB-like nuclease domain
AKO66_RS00595	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS00620	SM01060	AKO66_RS00620
AKO66_RS00640	SM01131	AKO66_RS00640
AKO66_RS00650	SM00267	diguanylate cyclase
AKO66_RS00680	SM00342	helix_turn_helix, arabinose operon control protein
AKO66_RS00705	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS00725	SM00788	Adenylosuccinate synthetase
AKO66_RS00765	SM00448	cheY-homologous receiver domain
AKO66_RS00765	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS00770	SM00091	PAS domain
AKO66_RS00770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS00770	SM00387	Histidine kinase-like ATPases
AKO66_RS00770	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS00785	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS00790	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKO66_RS00800	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS00820	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS00850	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS00855	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS00865	SM00448	cheY-homologous receiver domain
AKO66_RS00865	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS00870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS00870	SM00387	Histidine kinase-like ATPases
AKO66_RS00870	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS00925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS00925	SM00866	AKO66_RS00925
AKO66_RS00980	SM00354	helix_turn _helix lactose operon repressor
AKO66_RS00995	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS01035	SM01061	CAT RNA binding domain
AKO66_RS01040	SM00028	Tetratricopeptide repeats
AKO66_RS01050	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS01090	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS01135	SM00354	helix_turn _helix lactose operon repressor
AKO66_RS01205	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AKO66_RS01205	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS01215	SM00422	helix_turn_helix, mercury resistance
AKO66_RS01225	SM00421	helix_turn_helix, Lux Regulon
AKO66_RS01260	SM01133	AKO66_RS01260
AKO66_RS01270	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AKO66_RS01275	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS01275	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AKO66_RS01330	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS01340	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS01350	SM01061	CAT RNA binding domain
AKO66_RS01445	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS01450	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS01455	SM00870	AKO66_RS01455
AKO66_RS01550	SM00725	NEAr Transporter domain
AKO66_RS01555	SM00725	NEAr Transporter domain
AKO66_RS01560	SM00725	NEAr Transporter domain
AKO66_RS01575	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS01595	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS01610	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS01615	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS01620	SM00656	AKO66_RS01620
AKO66_RS01640	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AKO66_RS01695	SM00710	Parallel beta-helix repeats
AKO66_RS01705	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS01715	SM00954	Region found in RelA / SpoT proteins
AKO66_RS01725	SM00062	Bacterial periplasmic substrate-binding proteins
AKO66_RS01725	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AKO66_RS01735	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS01750	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AKO66_RS01825	SM00342	helix_turn_helix, arabinose operon control protein
AKO66_RS01905	SM01061	CAT RNA binding domain
AKO66_RS01915	SM00640	Glycosyl hydrolases family 32
AKO66_RS01925	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS01945	SM00986	Uracil DNA glycosylase superfamily
AKO66_RS01945	SM00987	UreE urease accessory protein, C-terminal domain 
AKO66_RS01970	SM00835	Cupin
AKO66_RS02005	SM00858	AKO66_RS02005
AKO66_RS02075	SM00344	helix_turn_helix ASNC type
AKO66_RS02160	SM00028	Tetratricopeptide repeats
AKO66_RS02185	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKO66_RS02240	SM00836	DALR anticodon binding domain
AKO66_RS02240	SM01016	Arginyl tRNA synthetase N terminal dom
AKO66_RS02250	SM00155	Phospholipase D. Active site motifs.
AKO66_RS02255	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS02275	SM00155	Phospholipase D. Active site motifs.
AKO66_RS02325	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS02350	SM00448	cheY-homologous receiver domain
AKO66_RS02375	SM00357	Cold shock protein domain
AKO66_RS02375	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS02375	SM00959	Rho termination factor, N-terminal domain
AKO66_RS02390	SM00919	Malic enzyme, NAD binding domain
AKO66_RS02390	SM01274	AKO66_RS02390
AKO66_RS02405	SM00937	AKO66_RS02405
AKO66_RS02440	SM00226	Low molecular weight phosphatase family
AKO66_RS02500	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS02535	SM00327	von Willebrand factor (vWF) type A domain
AKO66_RS02540	SM00327	von Willebrand factor (vWF) type A domain
AKO66_RS02560	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKO66_RS02570	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AKO66_RS02595	SM00938	Nitrogen regulatory protein P-II
AKO66_RS02605	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS02615	SM00062	Bacterial periplasmic substrate-binding proteins
AKO66_RS02615	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AKO66_RS02625	SM00014	Acid phosphatase homologues
AKO66_RS02635	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS02690	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AKO66_RS02690	SM00091	PAS domain
AKO66_RS02695	SM00487	DEAD-like helicases superfamily
AKO66_RS02695	SM00490	helicase superfamily c-terminal domain
AKO66_RS02705	SM00984	UDP binding domain
AKO66_RS02720	SM00344	helix_turn_helix ASNC type
AKO66_RS02740	SM00903	Flavin reductase like domain
AKO66_RS02755	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS02770	SM00354	helix_turn _helix lactose operon repressor
AKO66_RS02800	SM00854	Bacterial capsule synthesis protein PGA_cap
AKO66_RS02855	SM00354	helix_turn _helix lactose operon repressor
AKO66_RS02880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS02880	SM00387	Histidine kinase-like ATPases
AKO66_RS02885	SM00342	helix_turn_helix, arabinose operon control protein
AKO66_RS02885	SM00448	cheY-homologous receiver domain
AKO66_RS02915	SM00047	Lysozyme subfamily 2
AKO66_RS02915	SM00287	Bacterial SH3 domain homologues
AKO66_RS02980	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS03010	SM00646	AKO66_RS03010
AKO66_RS03015	SM00646	AKO66_RS03015
AKO66_RS03040	SM00984	UDP binding domain
AKO66_RS03085	SM00387	Histidine kinase-like ATPases
AKO66_RS03090	SM00421	helix_turn_helix, Lux Regulon
AKO66_RS03090	SM00448	cheY-homologous receiver domain
AKO66_RS03100	SM00487	DEAD-like helicases superfamily
AKO66_RS03100	SM00490	helicase superfamily c-terminal domain
AKO66_RS03180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS03180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS03190	SM00957	SecA DEAD-like domain
AKO66_RS03190	SM00958	SecA preprotein cross-linking domain
AKO66_RS03195	SM00937	AKO66_RS03195
AKO66_RS03220	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS03240	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKO66_RS03240	SM00245	tail specific protease
AKO66_RS03250	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKO66_RS03280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS03280	SM00387	Histidine kinase-like ATPases
AKO66_RS03280	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS03285	SM00448	cheY-homologous receiver domain
AKO66_RS03285	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS03320	SM00487	DEAD-like helicases superfamily
AKO66_RS03320	SM00490	helicase superfamily c-terminal domain
AKO66_RS03325	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS03360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS03360	SM00866	AKO66_RS03360
AKO66_RS03460	SM00028	Tetratricopeptide repeats
AKO66_RS03515	SM00947	Carbonic anhydrase
AKO66_RS03555	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS03560	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS03575	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS03650	SM00507	HNH nucleases
AKO66_RS03735	SM00047	Lysozyme subfamily 2
AKO66_RS03740	SM00710	Parallel beta-helix repeats
AKO66_RS03765	SM00646	AKO66_RS03765
AKO66_RS03815	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS03820	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS03825	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS03855	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS03940	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS03945	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS03965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS03965	SM00895	AKO66_RS03965
AKO66_RS03970	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS03990	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AKO66_RS04010	SM01192	AKO66_RS04010
AKO66_RS04010	SM01193	AKO66_RS04010
AKO66_RS04020	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS04060	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKO66_RS04060	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS04085	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS04090	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS04095	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS04100	SM00966	SpoVT / AbrB like domain 
AKO66_RS04115	SM00316	Ribosomal protein S1-like RNA-binding domain
AKO66_RS04115	SM00357	Cold shock protein domain
AKO66_RS04115	SM00955	AKO66_RS04115
AKO66_RS04145	SM00267	diguanylate cyclase
AKO66_RS04180	SM00387	Histidine kinase-like ATPases
AKO66_RS04185	SM00448	cheY-homologous receiver domain
AKO66_RS04210	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS04270	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS04305	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS04310	SM00448	cheY-homologous receiver domain
AKO66_RS04310	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS04315	SM00387	Histidine kinase-like ATPases
AKO66_RS04315	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS04325	SM00354	helix_turn _helix lactose operon repressor
AKO66_RS04335	SM00858	AKO66_RS04335
AKO66_RS04340	SM00710	Parallel beta-helix repeats
AKO66_RS04355	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS04360	SM01130	AKO66_RS04360
AKO66_RS04425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS04425	SM00387	Histidine kinase-like ATPases
AKO66_RS04430	SM00421	helix_turn_helix, Lux Regulon
AKO66_RS04430	SM00448	cheY-homologous receiver domain
AKO66_RS04465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS04465	SM00387	Histidine kinase-like ATPases
AKO66_RS04465	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS04470	SM00448	cheY-homologous receiver domain
AKO66_RS04470	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS04475	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKO66_RS04490	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS04540	SM00493	AKO66_RS04540
AKO66_RS04555	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS04555	SM00930	AKO66_RS04555
AKO66_RS04575	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS04640	SM00448	cheY-homologous receiver domain
AKO66_RS04640	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS04645	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS04710	SM00835	Cupin
AKO66_RS04755	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKO66_RS04900	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AKO66_RS04900	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AKO66_RS04945	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKO66_RS04995	SM00052	Putative diguanylate phosphodiesterase
AKO66_RS05020	SM00387	Histidine kinase-like ATPases
AKO66_RS05025	SM00421	helix_turn_helix, Lux Regulon
AKO66_RS05025	SM00448	cheY-homologous receiver domain
AKO66_RS05090	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS05100	SM00448	cheY-homologous receiver domain
AKO66_RS05105	SM00387	Histidine kinase-like ATPases
AKO66_RS05130	SM00479	AKO66_RS05130
AKO66_RS05135	SM01298	AKO66_RS05135
AKO66_RS05140	SM00387	Histidine kinase-like ATPases
AKO66_RS05140	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS05160	SM00344	helix_turn_helix ASNC type
AKO66_RS05170	SM00316	Ribosomal protein S1-like RNA-binding domain
AKO66_RS05220	SM01091	Transporter associated domain
AKO66_RS05245	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS05245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS05245	SM00319	Homologues of the ligand binding domain of Tar
AKO66_RS05250	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS05250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS05250	SM00319	Homologues of the ligand binding domain of Tar
AKO66_RS05255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS05255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS05260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS05260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS05260	SM00319	Homologues of the ligand binding domain of Tar
AKO66_RS05295	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKO66_RS05295	SM00876	Biotin and Thiamin Synthesis associated domain
AKO66_RS05305	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS05310	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS05330	SM00421	helix_turn_helix, Lux Regulon
AKO66_RS05405	SM00257	Lysin motif
AKO66_RS05485	SM00644	AKO66_RS05485
AKO66_RS05525	SM00244	prohibitin homologues
AKO66_RS05540	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS05725	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AKO66_RS05760	SM00947	Carbonic anhydrase
AKO66_RS05765	SM01234	AKO66_RS05765
AKO66_RS05825	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS05840	SM00563	Phosphate acyltransferases
AKO66_RS05905	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKO66_RS05925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS05930	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS05940	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS05955	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AKO66_RS05955	SM00091	PAS domain
AKO66_RS06005	SM00342	helix_turn_helix, arabinose operon control protein
AKO66_RS06035	SM00450	Rhodanese Homology Domain
AKO66_RS06070	SM00363	S4 RNA-binding domain
AKO66_RS06075	SM00420	helix_turn_helix, Deoxyribose operon repressor
AKO66_RS06110	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AKO66_RS06130	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS06135	SM00919	Malic enzyme, NAD binding domain
AKO66_RS06135	SM01274	AKO66_RS06135
AKO66_RS06175	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS06175	SM00843	AKO66_RS06175
AKO66_RS06200	SM00830	Chorismate mutase type II
AKO66_RS06205	SM00354	helix_turn _helix lactose operon repressor
AKO66_RS06215	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKO66_RS06230	SM00363	S4 RNA-binding domain
AKO66_RS06260	SM00363	S4 RNA-binding domain
AKO66_RS06260	SM01390	AKO66_RS06260
AKO66_RS06265	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKO66_RS06300	SM00981	AKO66_RS06300
AKO66_RS06325	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS06345	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS06360	SM00387	Histidine kinase-like ATPases
AKO66_RS06365	SM00448	cheY-homologous receiver domain
AKO66_RS06365	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS06375	SM00421	helix_turn_helix, Lux Regulon
AKO66_RS06375	SM00448	cheY-homologous receiver domain
AKO66_RS06390	SM00487	DEAD-like helicases superfamily
AKO66_RS06390	SM00490	helicase superfamily c-terminal domain
AKO66_RS06435	SM00852	Probable molybdopterin binding domain
AKO66_RS06460	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS06465	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKO66_RS06495	SM00481	DNA polymerase alpha chain like domain
AKO66_RS06500	SM00919	Malic enzyme, NAD binding domain
AKO66_RS06500	SM01274	AKO66_RS06500
AKO66_RS06545	SM01329	AKO66_RS06545
AKO66_RS06555	SM00448	cheY-homologous receiver domain
AKO66_RS06555	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS06560	SM00387	Histidine kinase-like ATPases
AKO66_RS06560	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS06565	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AKO66_RS06565	SM00474	3'-5' exonuclease
AKO66_RS06565	SM00475	5'-3' exonuclease
AKO66_RS06565	SM00482	DNA polymerase A domain
AKO66_RS06570	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AKO66_RS06570	SM01232	AKO66_RS06570
AKO66_RS06585	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AKO66_RS06610	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS06625	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AKO66_RS06630	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AKO66_RS06630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS06685	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AKO66_RS06695	SM00873	B3/4 domain
AKO66_RS06695	SM00874	tRNA synthetase B5 domain
AKO66_RS06695	SM00896	Ferredoxin-fold anticodon binding domain
AKO66_RS06715	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AKO66_RS06715	SM00481	DNA polymerase alpha chain like domain
AKO66_RS06715	SM00483	DNA polymerase X family
AKO66_RS06720	SM00463	Small MutS-related domain
AKO66_RS06720	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AKO66_RS06720	SM00534	ATPase domain of DNA mismatch repair MUTS family
AKO66_RS06750	SM00893	Electron transfer flavoprotein domain
AKO66_RS06755	SM00893	Electron transfer flavoprotein domain
AKO66_RS06760	SM00813	Alpha-L-arabinofuranosidase C-terminus
AKO66_RS06770	SM00465	GIY-YIG type nucleases (URI domain)
AKO66_RS06825	SM00421	helix_turn_helix, Lux Regulon
AKO66_RS06830	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS06840	SM00909	Sporulation and spore germination
AKO66_RS06885	SM00612	AKO66_RS06885
AKO66_RS06945	SM00917	LeuA allosteric (dimerisation) domain
AKO66_RS06950	SM01329	AKO66_RS06950
AKO66_RS06975	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS06975	SM00994	ClpX C4-type zinc finger
AKO66_RS06975	SM01086	C-terminal, D2-small domain, of ClpB protein
AKO66_RS06980	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS06985	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS06985	SM00464	Found in ATP-dependent protease La (LON)
AKO66_RS07030	SM01004	Delta-aminolevulinic acid dehydratase
AKO66_RS07040	SM00257	Lysin motif
AKO66_RS07135	SM01317	AKO66_RS07135
AKO66_RS07180	SM00257	Lysin motif
AKO66_RS07215	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AKO66_RS07220	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS07240	SM01323	AKO66_RS07240
AKO66_RS07290	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKO66_RS07290	SM00954	Region found in RelA / SpoT proteins
AKO66_RS07300	SM00287	Bacterial SH3 domain homologues
AKO66_RS07300	SM00646	AKO66_RS07300
AKO66_RS07325	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS07345	SM00028	Tetratricopeptide repeats
AKO66_RS07380	SM00062	Bacterial periplasmic substrate-binding proteins
AKO66_RS07380	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AKO66_RS07385	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS07395	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AKO66_RS07405	SM00732	Likely ribonuclease with RNase H fold.
AKO66_RS07545	SM00829	Enoylreductase
AKO66_RS07560	SM00062	Bacterial periplasmic substrate-binding proteins
AKO66_RS07565	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS07610	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AKO66_RS07625	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS07635	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS07645	SM01007	Class II Aldolase and Adducin N-terminal domain
AKO66_RS07675	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS07740	SM00028	Tetratricopeptide repeats
AKO66_RS07775	SM01103	AKO66_RS07775
AKO66_RS07785	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKO66_RS07805	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AKO66_RS07815	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS07850	SM00838	Elongation factor G C-terminus
AKO66_RS07855	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKO66_RS07875	SM00271	DnaJ molecular chaperone homology domain
AKO66_RS07890	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKO66_RS07940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKO66_RS07985	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKO66_RS08000	SM00400	zinc finger
AKO66_RS08000	SM00493	AKO66_RS08000
AKO66_RS08035	SM00487	DEAD-like helicases superfamily
AKO66_RS08035	SM00490	helicase superfamily c-terminal domain
AKO66_RS08040	SM00518	AP endonuclease family 2
AKO66_RS08055	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS08140	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS08145	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS08180	SM00028	Tetratricopeptide repeats
AKO66_RS08200	SM00631	AKO66_RS08200
AKO66_RS08220	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS08245	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS08305	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS08315	SM00487	DEAD-like helicases superfamily
AKO66_RS08315	SM00490	helicase superfamily c-terminal domain
AKO66_RS08335	SM00450	Rhodanese Homology Domain
AKO66_RS08345	SM00529	Helix-turn-helix diphteria tox regulatory element
AKO66_RS08380	SM00841	Elongation factor P, C-terminal
AKO66_RS08380	SM01185	AKO66_RS08380
AKO66_RS08390	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS08435	SM00878	Biotin carboxylase C-terminal domain
AKO66_RS08470	SM00861	Transketolase, pyrimidine binding domain
AKO66_RS08475	SM00363	S4 RNA-binding domain
AKO66_RS08490	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKO66_RS08495	SM00448	cheY-homologous receiver domain
AKO66_RS08515	SM00091	PAS domain
AKO66_RS08515	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS08525	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AKO66_RS08545	SM00861	Transketolase, pyrimidine binding domain
AKO66_RS08560	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AKO66_RS08570	SM00062	Bacterial periplasmic substrate-binding proteins
AKO66_RS08570	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AKO66_RS08580	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS08610	SM00260	Two component signalling adaptor domain
AKO66_RS08630	SM01350	AKO66_RS08630
AKO66_RS08670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS08670	SM00866	AKO66_RS08670
AKO66_RS08715	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS08785	SM00028	Tetratricopeptide repeats
AKO66_RS08865	SM00936	Penicillin-binding protein 5, C-terminal domain 
AKO66_RS08875	SM00387	Histidine kinase-like ATPases
AKO66_RS09010	SM00363	S4 RNA-binding domain
AKO66_RS09030	SM00448	cheY-homologous receiver domain
AKO66_RS09030	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS09035	SM00091	PAS domain
AKO66_RS09035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS09035	SM00387	Histidine kinase-like ATPases
AKO66_RS09035	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS09050	SM00257	Lysin motif
AKO66_RS09075	SM00487	DEAD-like helicases superfamily
AKO66_RS09075	SM00490	helicase superfamily c-terminal domain
AKO66_RS09085	SM00257	Lysin motif
AKO66_RS09105	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AKO66_RS09145	SM00316	Ribosomal protein S1-like RNA-binding domain
AKO66_RS09150	SM01240	AKO66_RS09150
AKO66_RS09200	SM00411	bacterial (prokaryotic) histone like domain
AKO66_RS09230	SM00562	AKO66_RS09230
AKO66_RS09235	SM00138	Methyltransferase, chemotaxis proteins 
AKO66_RS09300	SM00028	Tetratricopeptide repeats
AKO66_RS09305	SM00914	AKO66_RS09305
AKO66_RS09355	SM00851	MGS-like domain
AKO66_RS09395	SM00479	AKO66_RS09395
AKO66_RS09395	SM00491	AKO66_RS09395
AKO66_RS09420	SM00478	endonuclease III
AKO66_RS09420	SM00525	AKO66_RS09420
AKO66_RS09480	SM00487	DEAD-like helicases superfamily
AKO66_RS09480	SM00490	helicase superfamily c-terminal domain
AKO66_RS09485	SM00857	Resolvase, N terminal domain
AKO66_RS09490	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS09495	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS09525	SM00482	DNA polymerase A domain
AKO66_RS09550	SM00990	AKO66_RS09550
AKO66_RS09555	SM00487	DEAD-like helicases superfamily
AKO66_RS09660	SM00047	Lysozyme subfamily 2
AKO66_RS09665	SM00710	Parallel beta-helix repeats
AKO66_RS09690	SM00646	AKO66_RS09690
AKO66_RS09710	SM00028	Tetratricopeptide repeats
AKO66_RS09750	SM00981	AKO66_RS09750
AKO66_RS09760	SM00491	AKO66_RS09760
AKO66_RS09810	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AKO66_RS09810	SM00475	5'-3' exonuclease
AKO66_RS09845	SM00357	Cold shock protein domain
AKO66_RS09875	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKO66_RS09880	SM00567	E-Z type HEAT repeats
AKO66_RS09880	SM00932	Scaffold protein Nfu/NifU N terminal
AKO66_RS09980	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS10025	SM00091	PAS domain
AKO66_RS10025	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS10055	SM00014	Acid phosphatase homologues
AKO66_RS10085	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKO66_RS10085	SM00245	tail specific protease
AKO66_RS10150	SM00257	Lysin motif
AKO66_RS10160	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS10165	SM00327	von Willebrand factor (vWF) type A domain
AKO66_RS10170	SM00861	Transketolase, pyrimidine binding domain
AKO66_RS10230	SM00341	Helicase and RNase D C-terminal
AKO66_RS10230	SM00487	DEAD-like helicases superfamily
AKO66_RS10230	SM00490	helicase superfamily c-terminal domain
AKO66_RS10230	SM00956	AKO66_RS10230
AKO66_RS10235	SM00257	Lysin motif
AKO66_RS10275	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AKO66_RS10290	SM00871	Bacterial transcription activator, effector binding domain
AKO66_RS10295	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS10360	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AKO66_RS10375	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AKO66_RS10390	SM00422	helix_turn_helix, mercury resistance
AKO66_RS10395	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS10400	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS10430	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AKO66_RS10550	SM00420	helix_turn_helix, Deoxyribose operon repressor
AKO66_RS10550	SM01134	AKO66_RS10550
AKO66_RS10575	SM00878	Biotin carboxylase C-terminal domain
AKO66_RS10625	SM00100	Cyclic nucleotide-monophosphate binding domain
AKO66_RS10635	SM00155	Phospholipase D. Active site motifs.
AKO66_RS10670	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS10750	SM00354	helix_turn _helix lactose operon repressor
AKO66_RS10780	SM00606	Cellulose Binding Domain Type IV
AKO66_RS10790	SM00448	cheY-homologous receiver domain
AKO66_RS10790	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS10795	SM00387	Histidine kinase-like ATPases
AKO66_RS10795	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS10805	SM01061	CAT RNA binding domain
AKO66_RS10820	SM00422	helix_turn_helix, mercury resistance
AKO66_RS10875	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AKO66_RS10885	SM00226	Low molecular weight phosphatase family
AKO66_RS10890	SM01266	AKO66_RS10890
AKO66_RS10895	SM01329	AKO66_RS10895
AKO66_RS10910	SM00434	DNA Topoisomerase IV
AKO66_RS10915	SM00387	Histidine kinase-like ATPases
AKO66_RS10915	SM00433	TopoisomeraseII
AKO66_RS10920	SM00881	CoA binding domain
AKO66_RS10925	SM01207	AKO66_RS10925
AKO66_RS11015	SM00861	Transketolase, pyrimidine binding domain
AKO66_RS11025	SM00857	Resolvase, N terminal domain
AKO66_RS11030	SM00257	Lysin motif
AKO66_RS11065	SM00020	Trypsin-like serine protease
AKO66_RS11140	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
AKO66_RS11200	SM00506	Appr-1"-p processing enzyme
AKO66_RS11225	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS11230	SM00829	Enoylreductase
AKO66_RS11250	SM00860	SMI1 / KNR4 family
AKO66_RS11275	SM01230	AKO66_RS11275
AKO66_RS11280	SM00422	helix_turn_helix, mercury resistance
AKO66_RS11295	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS11300	SM00646	AKO66_RS11300
AKO66_RS11385	SM00028	Tetratricopeptide repeats
AKO66_RS11395	SM01058	CarD-like/TRCF domain
AKO66_RS11415	SM00853	MutL C terminal dimerisation domain
AKO66_RS11415	SM01340	AKO66_RS11415
AKO66_RS11420	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AKO66_RS11420	SM00534	ATPase domain of DNA mismatch repair MUTS family
AKO66_RS11435	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKO66_RS11450	SM00829	Enoylreductase
AKO66_RS11470	SM00322	K homology RNA-binding domain
AKO66_RS11470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKO66_RS11475	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS11480	SM00852	Probable molybdopterin binding domain
AKO66_RS11515	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS11540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS11540	SM00866	AKO66_RS11540
AKO66_RS11545	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS11545	SM00843	AKO66_RS11545
AKO66_RS11560	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS11565	SM01130	AKO66_RS11565
AKO66_RS11575	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AKO66_RS11645	SM00481	DNA polymerase alpha chain like domain
AKO66_RS11695	SM01118	AKO66_RS11695
AKO66_RS11710	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS11715	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS11740	SM00316	Ribosomal protein S1-like RNA-binding domain
AKO66_RS11740	SM00322	K homology RNA-binding domain
AKO66_RS11745	SM01387	AKO66_RS11745
AKO66_RS11750	SM00904	Riboflavin kinase
AKO66_RS11785	SM00316	Ribosomal protein S1-like RNA-binding domain
AKO66_RS11785	SM00322	K homology RNA-binding domain
AKO66_RS11800	SM00633	Glycosyl hydrolase family 10
AKO66_RS11810	SM01067	Cellulose binding domain
AKO66_RS11815	SM00479	AKO66_RS11815
AKO66_RS11815	SM00481	DNA polymerase alpha chain like domain
AKO66_RS11825	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKO66_RS11885	SM00260	Two component signalling adaptor domain
AKO66_RS11890	SM00073	Histidine Phosphotransfer domain
AKO66_RS11890	SM00260	Two component signalling adaptor domain
AKO66_RS11890	SM00387	Histidine kinase-like ATPases
AKO66_RS11890	SM01231	AKO66_RS11890
AKO66_RS11895	SM00448	cheY-homologous receiver domain
AKO66_RS11905	SM00962	SRP54-type protein, GTPase domain
AKO66_RS11940	SM00448	cheY-homologous receiver domain
AKO66_RS11990	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS12030	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS12030	SM01086	C-terminal, D2-small domain, of ClpB protein
AKO66_RS12050	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AKO66_RS12050	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AKO66_RS12050	SM00493	AKO66_RS12050
AKO66_RS12060	SM00881	CoA binding domain
AKO66_RS12120	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS12120	SM00962	SRP54-type protein, GTPase domain
AKO66_RS12120	SM00963	SRP54-type protein, helical bundle domain
AKO66_RS12130	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS12130	SM00962	SRP54-type protein, GTPase domain
AKO66_RS12130	SM00963	SRP54-type protein, helical bundle domain
AKO66_RS12135	SM00968	SMC proteins Flexible Hinge Domain
AKO66_RS12140	SM00358	Double-stranded RNA binding motif
AKO66_RS12140	SM00535	Ribonuclease III family
AKO66_RS12150	SM00822	AKO66_RS12150
AKO66_RS12155	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AKO66_RS12170	SM00487	DEAD-like helicases superfamily
AKO66_RS12170	SM00490	helicase superfamily c-terminal domain
AKO66_RS12185	SM01120	AKO66_RS12185
AKO66_RS12185	SM01121	AKO66_RS12185
AKO66_RS12205	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
AKO66_RS12220	SM00220	Serine/Threonine protein kinases, catalytic domain
AKO66_RS12220	SM00740	AKO66_RS12220
AKO66_RS12225	SM00331	Sigma factor PP2C-like phosphatases
AKO66_RS12225	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AKO66_RS12250	SM00487	DEAD-like helicases superfamily
AKO66_RS12250	SM00490	helicase superfamily c-terminal domain
AKO66_RS12260	SM01409	AKO66_RS12260
AKO66_RS12265	SM00072	Guanylate kinase homologues.
AKO66_RS12280	SM00831	Cation transporter/ATPase, N-terminus
AKO66_RS12330	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AKO66_RS12345	SM00851	MGS-like domain
AKO66_RS12345	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AKO66_RS12345	SM01209	AKO66_RS12345
AKO66_RS12350	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AKO66_RS12375	SM00363	S4 RNA-binding domain
AKO66_RS12400	SM00363	S4 RNA-binding domain
AKO66_RS12430	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS12455	SM00858	AKO66_RS12455
AKO66_RS12485	SM00864	Tubulin/FtsZ family, GTPase domain
AKO66_RS12485	SM00865	Tubulin/FtsZ family, C-terminal domain
AKO66_RS12490	SM00842	Cell division protein FtsA
AKO66_RS12545	SM00740	AKO66_RS12545
AKO66_RS12550	SM00740	AKO66_RS12550
AKO66_RS12585	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
AKO66_RS12660	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKO66_RS12710	SM00878	Biotin carboxylase C-terminal domain
AKO66_RS12735	SM00670	Large family of predicted nucleotide-binding domains
AKO66_RS12755	SM00838	Elongation factor G C-terminus
AKO66_RS12825	SM00861	Transketolase, pyrimidine binding domain
AKO66_RS12860	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS12880	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AKO66_RS12880	SM00091	PAS domain
AKO66_RS12880	SM00387	Histidine kinase-like ATPases
AKO66_RS12880	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS12885	SM00966	SpoVT / AbrB like domain 
AKO66_RS12905	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS12930	SM00420	helix_turn_helix, Deoxyribose operon repressor
AKO66_RS12930	SM01134	AKO66_RS12930
AKO66_RS12940	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS12975	SM00852	Probable molybdopterin binding domain
AKO66_RS13080	SM00052	Putative diguanylate phosphodiesterase
AKO66_RS13095	SM00257	Lysin motif
AKO66_RS13120	SM00260	Two component signalling adaptor domain
AKO66_RS13120	SM00448	cheY-homologous receiver domain
AKO66_RS13145	SM00091	PAS domain
AKO66_RS13145	SM00387	Histidine kinase-like ATPases
AKO66_RS13145	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS13170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS13170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS13200	SM01061	CAT RNA binding domain
AKO66_RS13205	SM00354	helix_turn _helix lactose operon repressor
AKO66_RS13275	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS13275	SM01086	C-terminal, D2-small domain, of ClpB protein
AKO66_RS13290	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS13295	SM00387	Histidine kinase-like ATPases
AKO66_RS13295	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS13310	SM01007	Class II Aldolase and Adducin N-terminal domain
AKO66_RS13345	SM00091	PAS domain
AKO66_RS13345	SM00387	Histidine kinase-like ATPases
AKO66_RS13345	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS13405	SM00052	Putative diguanylate phosphodiesterase
AKO66_RS13405	SM00267	diguanylate cyclase
AKO66_RS13410	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS13420	SM00422	helix_turn_helix, mercury resistance
AKO66_RS13440	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKO66_RS13440	SM00924	MgtE intracellular N domain
AKO66_RS13460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS13460	SM00387	Histidine kinase-like ATPases
AKO66_RS13460	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS13465	SM00448	cheY-homologous receiver domain
AKO66_RS13465	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS13470	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS13500	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS13515	SM00028	Tetratricopeptide repeats
AKO66_RS13525	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AKO66_RS13550	SM00342	helix_turn_helix, arabinose operon control protein
AKO66_RS13585	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS13595	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AKO66_RS13610	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS13635	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKO66_RS13675	SM01059	Chloramphenicol acetyltransferase
AKO66_RS13680	SM00861	Transketolase, pyrimidine binding domain
AKO66_RS13690	SM00829	Enoylreductase
AKO66_RS13715	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS13740	SM01022	AKO66_RS13740
AKO66_RS13765	SM00257	Lysin motif
AKO66_RS13765	SM00644	AKO66_RS13765
AKO66_RS13790	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS13820	SM00612	AKO66_RS13820
AKO66_RS13830	SM00829	Enoylreductase
AKO66_RS13835	SM01005	Alanine racemase, C-terminal domain
AKO66_RS13850	SM00871	Bacterial transcription activator, effector binding domain
AKO66_RS13910	SM00860	SMI1 / KNR4 family
AKO66_RS13920	SM00028	Tetratricopeptide repeats
AKO66_RS13925	SM01059	Chloramphenicol acetyltransferase
AKO66_RS13940	SM00028	Tetratricopeptide repeats
AKO66_RS13955	SM01130	AKO66_RS13955
AKO66_RS13975	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS13985	SM01004	Delta-aminolevulinic acid dehydratase
AKO66_RS14020	SM00860	SMI1 / KNR4 family
AKO66_RS14260	SM00954	Region found in RelA / SpoT proteins
AKO66_RS14270	SM01118	AKO66_RS14270
AKO66_RS14300	SM00155	Phospholipase D. Active site motifs.
AKO66_RS14330	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS14335	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS14380	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS14385	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS14395	SM00825	Beta-ketoacyl synthase
AKO66_RS14450	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AKO66_RS14455	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AKO66_RS14475	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AKO66_RS14530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS14530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS14540	SM00316	Ribosomal protein S1-like RNA-binding domain
AKO66_RS14555	SM01018	B12 binding domain
AKO66_RS14580	SM01006	Siderophore biosynthesis protein domain
AKO66_RS14615	SM00342	helix_turn_helix, arabinose operon control protein
AKO66_RS14790	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS14815	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS14825	SM01119	AKO66_RS14825
AKO66_RS14835	SM00914	AKO66_RS14835
AKO66_RS14850	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS14855	SM00855	Phosphoglycerate mutase family
AKO66_RS14885	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS14960	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS14990	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS15020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKO66_RS15065	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKO66_RS15105	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS15120	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS15125	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS15175	SM01091	Transporter associated domain
AKO66_RS15180	SM00422	helix_turn_helix, mercury resistance
AKO66_RS15185	SM01091	Transporter associated domain
AKO66_RS15190	SM00563	Phosphate acyltransferases
AKO66_RS15215	SM00257	Lysin motif
AKO66_RS15220	SM00098	Alkaline phosphatase homologues
AKO66_RS15240	SM01060	AKO66_RS15240
AKO66_RS15255	SM00421	helix_turn_helix, Lux Regulon
AKO66_RS15255	SM00448	cheY-homologous receiver domain
AKO66_RS15260	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKO66_RS15340	SM00318	Staphylococcal nuclease homologues
AKO66_RS15345	SM00138	Methyltransferase, chemotaxis proteins 
AKO66_RS15345	SM00387	Histidine kinase-like ATPases
AKO66_RS15345	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS15375	SM00267	diguanylate cyclase
AKO66_RS15380	SM00357	Cold shock protein domain
AKO66_RS15410	SM00763	PrkA AAA domain
AKO66_RS15425	SM00567	E-Z type HEAT repeats
AKO66_RS15460	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS15480	SM00062	Bacterial periplasmic substrate-binding proteins
AKO66_RS15485	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS15530	SM00855	Phosphoglycerate mutase family
AKO66_RS15695	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS15700	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS15705	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS15735	SM00478	endonuclease III
AKO66_RS15755	SM00835	Cupin
AKO66_RS15825	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS15845	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS15860	SM00829	Enoylreductase
AKO66_RS15885	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS15895	SM00342	helix_turn_helix, arabinose operon control protein
AKO66_RS15990	SM00422	helix_turn_helix, mercury resistance
AKO66_RS15990	SM00871	Bacterial transcription activator, effector binding domain
AKO66_RS16025	SM00478	endonuclease III
AKO66_RS16105	SM00226	Low molecular weight phosphatase family
AKO66_RS16135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS16135	SM00866	AKO66_RS16135
AKO66_RS16140	SM00642	Alpha-amylase domain
AKO66_RS16155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS16155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS16230	SM00631	AKO66_RS16230
AKO66_RS16245	SM00448	cheY-homologous receiver domain
AKO66_RS16250	SM00387	Histidine kinase-like ATPases
AKO66_RS16265	SM00320	WD40 repeats
AKO66_RS16295	SM00829	Enoylreductase
AKO66_RS16300	SM00487	DEAD-like helicases superfamily
AKO66_RS16300	SM00490	helicase superfamily c-terminal domain
AKO66_RS16305	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS16315	SM00422	helix_turn_helix, mercury resistance
AKO66_RS16325	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS16465	SM00860	SMI1 / KNR4 family
AKO66_RS16490	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AKO66_RS16510	SM00845	GatB domain
AKO66_RS16545	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AKO66_RS16545	SM00292	breast cancer carboxy-terminal domain
AKO66_RS16545	SM00532	Ligase N family
AKO66_RS16600	SM00882	Coenzyme A transferase
AKO66_RS16605	SM00882	Coenzyme A transferase
AKO66_RS16630	SM01209	AKO66_RS16630
AKO66_RS16630	SM01210	AKO66_RS16630
AKO66_RS16635	SM00798	AICARFT/IMPCHase bienzyme
AKO66_RS16635	SM00851	MGS-like domain
AKO66_RS16660	SM01211	AKO66_RS16660
AKO66_RS16675	SM00998	Adenylosuccinate lyase C-terminus
AKO66_RS16685	SM01001	AIR carboxylase
AKO66_RS16750	SM00850	LytTr DNA-binding domain
AKO66_RS16775	SM00342	helix_turn_helix, arabinose operon control protein
AKO66_RS16775	SM00871	Bacterial transcription activator, effector binding domain
AKO66_RS16780	SM00917	LeuA allosteric (dimerisation) domain
AKO66_RS16785	SM00342	helix_turn_helix, arabinose operon control protein
AKO66_RS16805	SM00460	Transglutaminase/protease-like homologues
AKO66_RS16870	SM00287	Bacterial SH3 domain homologues
AKO66_RS16880	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS16910	SM00883	Chaperonin 10 Kd subunit
AKO66_RS16940	SM00881	CoA binding domain
AKO66_RS16950	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS17070	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS17090	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS17135	SM00850	LytTr DNA-binding domain
AKO66_RS17160	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS17170	SM00870	AKO66_RS17170
AKO66_RS17210	SM00422	helix_turn_helix, mercury resistance
AKO66_RS17215	SM00829	Enoylreductase
AKO66_RS17220	SM01058	CarD-like/TRCF domain
AKO66_RS17225	SM00357	Cold shock protein domain
AKO66_RS17280	SM00731	SprT homologues.
AKO66_RS17285	SM00316	Ribosomal protein S1-like RNA-binding domain
AKO66_RS17285	SM00732	Likely ribonuclease with RNase H fold.
AKO66_RS17290	SM00331	Sigma factor PP2C-like phosphatases
AKO66_RS17290	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AKO66_RS17310	SM00331	Sigma factor PP2C-like phosphatases
AKO66_RS17340	SM01005	Alanine racemase, C-terminal domain
AKO66_RS17370	SM00487	DEAD-like helicases superfamily
AKO66_RS17370	SM00490	helicase superfamily c-terminal domain
AKO66_RS17415	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS17435	SM00448	cheY-homologous receiver domain
AKO66_RS17440	SM00091	PAS domain
AKO66_RS17440	SM00387	Histidine kinase-like ATPases
AKO66_RS17515	SM00267	diguanylate cyclase
AKO66_RS17525	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AKO66_RS17525	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AKO66_RS17525	SM00493	AKO66_RS17525
AKO66_RS17585	SM00346	helix_turn_helix isocitrate lyase regulation
AKO66_RS17590	SM00797	Allophanate hydrolase subunit 2
AKO66_RS17595	SM00796	Allophanate hydrolase subunit 1
AKO66_RS17615	SM00028	Tetratricopeptide repeats
AKO66_RS17635	SM00894	Excalibur calcium-binding domain
AKO66_RS17660	SM00900	AKO66_RS17660
AKO66_RS17675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS17675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS17675	SM01049	AKO66_RS17675
AKO66_RS17725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS17740	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AKO66_RS17765	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKO66_RS17770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS17770	SM00387	Histidine kinase-like ATPases
AKO66_RS17770	SM00388	His Kinase A (phosphoacceptor) domain
AKO66_RS17775	SM00448	cheY-homologous receiver domain
AKO66_RS17775	SM00862	Transcriptional regulatory protein, C terminal
AKO66_RS17800	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS17810	SM00062	Bacterial periplasmic substrate-binding proteins
AKO66_RS17810	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AKO66_RS17825	SM00710	Parallel beta-helix repeats
AKO66_RS17840	SM00062	Bacterial periplasmic substrate-binding proteins
AKO66_RS17850	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS17865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS17875	SM00824	Thioesterase
AKO66_RS17880	SM00822	AKO66_RS17880
AKO66_RS17885	SM00822	AKO66_RS17885
AKO66_RS17885	SM00823	Phosphopantetheine attachment site
AKO66_RS17890	SM00823	Phosphopantetheine attachment site
AKO66_RS17895	SM00823	Phosphopantetheine attachment site
AKO66_RS17900	SM00823	Phosphopantetheine attachment site
AKO66_RS17915	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS17945	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKO66_RS17945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKO66_RS17960	SM00344	helix_turn_helix ASNC type
AKO66_RS17975	SM00062	Bacterial periplasmic substrate-binding proteins
AKO66_RS18040	SM00346	helix_turn_helix isocitrate lyase regulation
AKO66_RS18140	SM00354	helix_turn _helix lactose operon repressor
AKO66_RS18185	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKO66_RS18185	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS18275	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS18280	SM00448	cheY-homologous receiver domain
AKO66_RS18280	SM00850	LytTr DNA-binding domain
AKO66_RS18285	SM00387	Histidine kinase-like ATPases
AKO66_RS18305	SM00421	helix_turn_helix, Lux Regulon
AKO66_RS18305	SM00448	cheY-homologous receiver domain
AKO66_RS18320	SM00448	cheY-homologous receiver domain
AKO66_RS18325	SM00387	Histidine kinase-like ATPases
AKO66_RS18360	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS18460	SM00872	Alpha mannosidase, middle domain
AKO66_RS18495	SM01061	CAT RNA binding domain
AKO66_RS18510	SM00450	Rhodanese Homology Domain
AKO66_RS18540	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKO66_RS18560	SM00946	Prolyl-tRNA synthetase, C-terminal
AKO66_RS18575	SM00450	Rhodanese Homology Domain
AKO66_RS18575	SM00849	Metallo-beta-lactamase superfamily
AKO66_RS18580	SM00450	Rhodanese Homology Domain
AKO66_RS18585	SM00450	Rhodanese Homology Domain
AKO66_RS18610	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AKO66_RS18615	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS18620	SM00825	Beta-ketoacyl synthase
AKO66_RS18665	SM00342	helix_turn_helix, arabinose operon control protein
AKO66_RS18680	SM00530	Helix-turn-helix XRE-family like proteins 
AKO66_RS18690	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS18695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKO66_RS18725	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS18760	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS18770	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS18790	SM00387	Histidine kinase-like ATPases
AKO66_RS18940	SM01251	AKO66_RS18940
AKO66_RS18955	SM00646	AKO66_RS18955
AKO66_RS19005	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS19010	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS19020	SM00662	RNA polymerases D
AKO66_RS19040	SM00316	Ribosomal protein S1-like RNA-binding domain
AKO66_RS19100	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AKO66_RS19105	SM01374	AKO66_RS19105
AKO66_RS19125	SM00322	K homology RNA-binding domain
AKO66_RS19140	SM01382	AKO66_RS19140
AKO66_RS19140	SM01383	AKO66_RS19140
AKO66_RS19160	SM01403	AKO66_RS19160
AKO66_RS19175	SM00838	Elongation factor G C-terminus
AKO66_RS19175	SM00889	Elongation factor G, domain IV
AKO66_RS19195	SM00663	RNA polymerase I subunit A N-terminus
AKO66_RS19225	SM00649	Ribosomal protein L11/L12
AKO66_RS19230	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AKO66_RS19230	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AKO66_RS19250	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AKO66_RS19255	SM00535	Ribonuclease III family
AKO66_RS19260	SM00840	AKO66_RS19260
AKO66_RS19285	SM00670	Large family of predicted nucleotide-binding domains
AKO66_RS19295	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS19300	SM00382	ATPases associated with a variety of cellular activities
AKO66_RS19300	SM01086	C-terminal, D2-small domain, of ClpB protein
