locus-tag class description UP15_RS00005 PF11638 DnaA N-terminal domain UP15_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix UP15_RS00005 PF00308 Bacterial dnaA protein UP15_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain UP15_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain UP15_RS00010 PF02767 DNA polymerase III beta subunit, central domain UP15_RS00020 PF02463 RecF/RecN/SMC N terminal domain UP15_RS00025 PF04025 Domain of unknown function (DUF370) UP15_RS00030 PF00204 DNA gyrase B UP15_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus UP15_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS00030 PF01751 Toprim domain UP15_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller UP15_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A UP15_RS00065 PF14175 YaaC-like Protein UP15_RS00070 PF00478 IMP dehydrogenase / GMP reductase domain UP15_RS00070 PF00571 CBS domain UP15_RS00075 PF00768 D-alanyl-D-alanine carboxypeptidase UP15_RS00075 PF07943 Penicillin-binding protein 5, C-terminal domain UP15_RS00085 PF00392 Bacterial regulatory proteins, gntR family UP15_RS00085 PF00155 Aminotransferase class I and II UP15_RS00090 PF01680 SOR/SNZ family UP15_RS00095 PF01174 SNO glutamine amidotransferase family UP15_RS00100 PF02403 Seryl-tRNA synthetase N-terminal domain UP15_RS00100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP15_RS00105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS00120 PF01712 Deoxynucleoside kinase UP15_RS00125 PF01712 Deoxynucleoside kinase UP15_RS00130 PF00704 Glycosyl hydrolases family 18 UP15_RS00130 PF01476 LysM domain UP15_RS00135 PF00857 Isochorismatase family UP15_RS00140 PF14437 MafB19-like deaminase UP15_RS00150 PF12169 DNA polymerase III subunits gamma and tau domain III UP15_RS00155 PF02575 YbaB/EbfC DNA-binding family UP15_RS00160 PF13662 Toprim domain UP15_RS00160 PF02132 RecR protein UP15_RS00165 PF10704 Protein of unknown function (DUF2508) UP15_RS00170 PF07441 SigmaK-factor processing regulatory protein BofA UP15_RS00200 PF10764 Inhibitor of sigma-G Gin UP15_RS00205 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein UP15_RS00210 PF05816 Toxic anion resistance protein (TelA) UP15_RS00215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UP15_RS00215 PF01276 Orn/Lys/Arg decarboxylase, major domain UP15_RS00220 PF02223 Thymidylate kinase UP15_RS00225 PF06153 Cyclic-di-AMP receptor UP15_RS00230 PF03885 Protein of unknown function (DUF327) UP15_RS00235 PF09115 DNA polymerase III, delta subunit, C terminal UP15_RS00240 PF04468 PSP1 C-terminal conserved region UP15_RS00245 PF06156 Initiation control protein YabA UP15_RS00250 PF05175 Methyltransferase small domain UP15_RS00255 PF01541 GIY-YIG catalytic domain UP15_RS00260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP15_RS00265 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin UP15_RS00265 PF18277 AbrB C-terminal domain UP15_RS00270 PF01588 Putative tRNA binding domain UP15_RS00270 PF09334 tRNA synthetases class I (M) UP15_RS00270 PF08264 Anticodon-binding domain of tRNA UP15_RS00275 PF01026 TatD related DNase UP15_RS00280 PF06725 3D domain UP15_RS00280 PF07501 G5 domain UP15_RS00280 PF03990 G5-linked-Ubiquitin-like domain UP15_RS00285 PF13331 Domain of unknown function (DUF4093) UP15_RS00285 PF13662 Toprim domain UP15_RS00290 PF00398 Ribosomal RNA adenine dimethylase UP15_RS00295 PF05582 YabG peptidase U57 UP15_RS00300 PF06257 Biofilm formation stimulator VEG UP15_RS00305 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP15_RS00310 PF08544 GHMP kinases C terminal UP15_RS00310 PF00288 GHMP kinases N terminal domain UP15_RS00315 PF00156 Phosphoribosyl transferase domain UP15_RS00315 PF09182 Bacterial purine repressor, N-terminal UP15_RS00320 PF01042 Endoribonuclease L-PSP UP15_RS00325 PF04026 SpoVG UP15_RS00330 PF00132 Bacterial transferase hexapeptide (six repeats) UP15_RS00330 PF00483 Nucleotidyl transferase UP15_RS00335 PF14572 Phosphoribosyl synthetase-associated domain UP15_RS00335 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UP15_RS00340 PF14693 Ribosomal protein TL5, C-terminal domain UP15_RS00340 PF01386 Ribosomal L25p family UP15_RS00345 PF01195 Peptidyl-tRNA hydrolase UP15_RS00350 PF10955 Protein of unknown function (DUF2757) UP15_RS00355 PF02559 CarD-like/TRCF domain UP15_RS00355 PF00270 DEAD/DEAH box helicase UP15_RS00355 PF00271 Helicase conserved C-terminal domain UP15_RS00355 PF03461 TRCF domain UP15_RS00355 PF17757 UvrB interaction domain UP15_RS00360 PF15714 Stage V sporulation protein T C-terminal, transcription factor UP15_RS00360 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin UP15_RS00365 PF14667 Polysaccharide biosynthesis C-terminal domain UP15_RS00365 PF01943 Polysaccharide biosynthesis protein UP15_RS00370 PF03819 MazG nucleotide pyrophosphohydrolase domain UP15_RS00370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP15_RS00375 PF01479 S4 domain UP15_RS00380 PF07873 YabP family UP15_RS00385 PF09578 Spore cortex protein YabQ (Spore_YabQ) UP15_RS00390 PF04977 Septum formation initiator UP15_RS00395 PF00575 S1 RNA binding domain UP15_RS00410 PF07228 Stage II sporulation protein E (SpoIIE) UP15_RS00415 PF00092 von Willebrand factor type A domain UP15_RS00420 PF00069 Protein kinase domain UP15_RS00425 PF01171 PP-loop family UP15_RS00425 PF11734 TilS substrate C-terminal domain UP15_RS00425 PF09179 TilS substrate binding domain UP15_RS00430 PF00156 Phosphoribosyl transferase domain UP15_RS00435 PF06480 FtsH Extracellular UP15_RS00435 PF00004 ATPase family associated with various cellular activities (AAA) UP15_RS00435 PF01434 Peptidase family M41 UP15_RS00435 PF17862 AAA+ lid domain UP15_RS00440 PF03309 Type III pantothenate kinase UP15_RS00445 PF01430 Hsp33 protein UP15_RS00450 PF13145 PPIC-type PPIASE domain UP15_RS00455 PF00291 Pyridoxal-phosphate dependent enzyme UP15_RS00460 PF04715 Anthranilate synthase component I, N terminal region UP15_RS00460 PF00425 chorismate binding enzyme UP15_RS00465 PF00117 Glutamine amidotransferase class-I UP15_RS00470 PF01063 Amino-transferase class IV UP15_RS00475 PF00809 Pterin binding enzyme UP15_RS00480 PF02152 Dihydroneopterin aldolase UP15_RS00485 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) UP15_RS00490 PF01381 Helix-turn-helix UP15_RS00495 PF01207 Dihydrouridine synthase (Dus) UP15_RS00500 PF00152 tRNA synthetases class II (D, K and N) UP15_RS00500 PF01336 OB-fold nucleic acid binding domain UP15_RS00580 PF17727 CtsR C-terminal dimerization domain UP15_RS00580 PF05848 CtsR N-terminal HTH domain UP15_RS00585 PF02151 UvrB/uvrC motif UP15_RS00590 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain UP15_RS00595 PF00004 ATPase family associated with various cellular activities (AAA) UP15_RS00595 PF07724 AAA domain (Cdc48 subfamily) UP15_RS00595 PF17871 AAA lid domain UP15_RS00595 PF02861 Clp amino terminal domain, pathogenicity island component UP15_RS00595 PF10431 C-terminal, D2-small domain, of ClpB protein UP15_RS00600 PF18073 Rubredoxin metal binding domain UP15_RS00605 PF02457 DisA bacterial checkpoint controller nucleotide-binding UP15_RS00605 PF10635 DisA bacterial checkpoint controller linker region UP15_RS00615 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UP15_RS00620 PF02542 YgbB family UP15_RS00625 PF00749 tRNA synthetases class I (E and Q), catalytic domain UP15_RS00630 PF06426 Serine acetyltransferase, N-terminal UP15_RS00630 PF00132 Bacterial transferase hexapeptide (six repeats) UP15_RS00635 PF01406 tRNA synthetases class I (C) catalytic domain UP15_RS00635 PF09190 DALR domain UP15_RS00640 PF00636 Ribonuclease III domain UP15_RS00645 PF00588 SpoU rRNA Methylase family UP15_RS00645 PF08032 RNA 2'-O ribose methyltransferase substrate binding UP15_RS00650 PF05991 YacP-like NYN domain UP15_RS00655 PF08281 Sigma-70, region 4 UP15_RS00655 PF04542 Sigma-70 region 2 UP15_RS00660 PF00584 SecE/Sec61-gamma subunits of protein translocation complex UP15_RS00665 PF00467 KOW motif UP15_RS00665 PF02357 Transcription termination factor nusG UP15_RS00670 PF00298 Ribosomal protein L11, RNA binding domain UP15_RS00670 PF03946 Ribosomal protein L11, N-terminal domain UP15_RS00675 PF00687 Ribosomal protein L1p/L10e family UP15_RS00680 PF00466 Ribosomal protein L10 UP15_RS00685 PF16320 Ribosomal protein L7/L12 dimerisation domain UP15_RS00685 PF00542 Ribosomal protein L7/L12 C-terminal domain UP15_RS00690 PF05175 Methyltransferase small domain UP15_RS00695 PF10385 RNA polymerase beta subunit external 1 domain UP15_RS00695 PF04563 RNA polymerase beta subunit UP15_RS00695 PF04565 RNA polymerase Rpb2, domain 3 UP15_RS00695 PF00562 RNA polymerase Rpb2, domain 6 UP15_RS00695 PF04560 RNA polymerase Rpb2, domain 7 UP15_RS00695 PF04561 RNA polymerase Rpb2, domain 2 UP15_RS00700 PF00623 RNA polymerase Rpb1, domain 2 UP15_RS00700 PF05000 RNA polymerase Rpb1, domain 4 UP15_RS00700 PF04997 RNA polymerase Rpb1, domain 1 UP15_RS00700 PF04983 RNA polymerase Rpb1, domain 3 UP15_RS00700 PF04998 RNA polymerase Rpb1, domain 5 UP15_RS00705 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family UP15_RS00710 PF00164 Ribosomal protein S12/S23 UP15_RS00715 PF00177 Ribosomal protein S7p/S5e UP15_RS00720 PF03144 Elongation factor Tu domain 2 UP15_RS00720 PF03764 Elongation factor G, domain IV UP15_RS00720 PF14492 Elongation Factor G, domain II UP15_RS00720 PF00009 Elongation factor Tu GTP binding domain UP15_RS00720 PF00679 Elongation factor G C-terminus UP15_RS00725 PF00009 Elongation factor Tu GTP binding domain UP15_RS00725 PF03144 Elongation factor Tu domain 2 UP15_RS00725 PF03143 Elongation factor Tu C-terminal domain UP15_RS00730 PF12146 Serine aminopeptidase, S33 UP15_RS00735 PF00338 Ribosomal protein S10p/S20e UP15_RS00740 PF00297 Ribosomal protein L3 UP15_RS00745 PF00573 Ribosomal protein L4/L1 family UP15_RS00750 PF00276 Ribosomal protein L23 UP15_RS00755 PF03947 Ribosomal Proteins L2, C-terminal domain UP15_RS00755 PF00181 Ribosomal Proteins L2, RNA binding domain UP15_RS00760 PF00203 Ribosomal protein S19 UP15_RS00765 PF00237 Ribosomal protein L22p/L17e UP15_RS00770 PF07650 KH domain UP15_RS00770 PF00189 Ribosomal protein S3, C-terminal domain UP15_RS00775 PF00252 Ribosomal protein L16p/L10e UP15_RS00780 PF00831 Ribosomal L29 protein UP15_RS00785 PF00366 Ribosomal protein S17 UP15_RS00790 PF00238 Ribosomal protein L14p/L23e UP15_RS00795 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 UP15_RS00795 PF00467 KOW motif UP15_RS00800 PF00281 Ribosomal protein L5 UP15_RS00800 PF00673 ribosomal L5P family C-terminus UP15_RS00805 PF00253 Ribosomal protein S14p/S29e UP15_RS00810 PF00410 Ribosomal protein S8 UP15_RS00815 PF00347 Ribosomal protein L6 UP15_RS00820 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast UP15_RS00825 PF03719 Ribosomal protein S5, C-terminal domain UP15_RS00825 PF00333 Ribosomal protein S5, N-terminal domain UP15_RS00830 PF00327 Ribosomal protein L30p/L7e UP15_RS00835 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A UP15_RS00840 PF00344 SecY translocase UP15_RS00845 PF05191 Adenylate kinase, active site lid UP15_RS00850 PF00557 Metallopeptidase family M24 UP15_RS00855 PF01176 Translation initiation factor 1A / IF-1 UP15_RS00860 PF00444 Ribosomal protein L36 UP15_RS00865 PF00416 Ribosomal protein S13/S18 UP15_RS00870 PF00411 Ribosomal protein S11 UP15_RS00875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain UP15_RS00875 PF01000 RNA polymerase Rpb3/RpoA insert domain UP15_RS00875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain UP15_RS00880 PF01196 Ribosomal protein L17 UP15_RS00885 PF00005 ABC transporter UP15_RS00890 PF00005 ABC transporter UP15_RS00895 PF02361 Cobalt transport protein UP15_RS00900 PF01416 tRNA pseudouridine synthase UP15_RS00905 PF00572 Ribosomal protein L13 UP15_RS00910 PF00380 Ribosomal protein S9/S16 UP15_RS00915 PF13302 Acetyltransferase (GNAT) domain UP15_RS00935 PF10730 Protein of unknown function (DUF2521) UP15_RS00940 PF01520 N-acetylmuramoyl-L-alanine amidase UP15_RS00945 PF10609 NUBPL iron-transfer P-loop NTPase UP15_RS00950 PF17898 Spore germination GerD central core domain UP15_RS00955 PF14089 KinB-signalling pathway activation in sporulation UP15_RS00960 PF01522 Polysaccharide deacetylase UP15_RS00990 PF01740 STAS domain UP15_RS00990 PF00916 Sulfate permease family UP15_RS00995 PF01758 Sodium Bile acid symporter family UP15_RS01000 PF07075 Protein of unknown function (DUF1343) UP15_RS01005 PF00933 Glycosyl hydrolase family 3 N terminal domain UP15_RS01005 PF01915 Glycosyl hydrolase family 3 C-terminal domain UP15_RS01010 PF00144 Beta-lactamase UP15_RS01015 PF02378 Phosphotransferase system, EIIC UP15_RS01015 PF00367 phosphotransferase system, EIIB UP15_RS01020 PF01380 SIS domain UP15_RS01020 PF01418 Helix-turn-helix domain, rpiR family UP15_RS01025 PF13580 SIS domain UP15_RS01055 PF00491 Arginase family UP15_RS01060 PF04542 Sigma-70 region 2 UP15_RS01060 PF08281 Sigma-70, region 4 UP15_RS01065 PF13490 Putative zinc-finger UP15_RS01070 PF02457 DisA bacterial checkpoint controller nucleotide-binding UP15_RS01075 PF07949 YbbR-like protein UP15_RS01080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UP15_RS01080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UP15_RS01080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UP15_RS01080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UP15_RS01085 PF01380 SIS domain UP15_RS01100 PF13732 Domain of unknown function (DUF4162) UP15_RS01100 PF00005 ABC transporter UP15_RS01110 PF00005 ABC transporter UP15_RS01115 PF00005 ABC transporter UP15_RS01115 PF02687 FtsX-like permease family UP15_RS01115 PF12704 MacB-like periplasmic core domain UP15_RS01120 PF03551 Transcriptional regulator PadR-like family UP15_RS01120 PF10400 Virulence activator alpha C-term UP15_RS01135 PF00668 Condensation domain UP15_RS01135 PF00550 Phosphopantetheine attachment site UP15_RS01135 PF00501 AMP-binding enzyme UP15_RS01135 PF13193 AMP-binding enzyme C-terminal domain UP15_RS01140 PF04235 Protein of unknown function (DUF418) UP15_RS01150 PF00005 ABC transporter UP15_RS01160 PF01381 Helix-turn-helix UP15_RS01170 PF00561 alpha/beta hydrolase fold UP15_RS01175 PF12833 Helix-turn-helix domain UP15_RS01180 PF17922 Tetracyclin repressor-like, C-terminal domain UP15_RS01180 PF00440 Bacterial regulatory proteins, tetR family UP15_RS01195 PF00324 Amino acid permease UP15_RS01200 PF03009 Glycerophosphoryl diester phosphodiesterase family UP15_RS01205 PF07690 Major Facilitator Superfamily UP15_RS01215 PF03190 Protein of unknown function, DUF255 UP15_RS01225 PF13286 Phosphohydrolase-associated domain UP15_RS01225 PF01966 HD domain UP15_RS01230 PF03190 Protein of unknown function, DUF255 UP15_RS01240 PF00109 Beta-ketoacyl synthase, N-terminal domain UP15_RS01240 PF02801 Beta-ketoacyl synthase, C-terminal domain UP15_RS01275 PF02583 Metal-sensitive transcriptional repressor UP15_RS01280 PF13686 DsrE/DsrF/DrsH-like family UP15_RS01290 PF01206 Sulfurtransferase TusA UP15_RS01290 PF00581 Rhodanese-like domain UP15_RS01295 PF00581 Rhodanese-like domain UP15_RS01295 PF00753 Metallo-beta-lactamase superfamily UP15_RS01300 PF01206 Sulfurtransferase TusA UP15_RS01305 PF01925 Sulfite exporter TauE/SafE UP15_RS01310 PF09180 Prolyl-tRNA synthetase, C-terminal UP15_RS01310 PF03129 Anticodon binding domain UP15_RS01310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP15_RS01315 PF07690 Major Facilitator Superfamily UP15_RS01330 PF01047 MarR family UP15_RS01340 PF04463 Protein of unknown function (DUF523) UP15_RS01350 PF00248 Aldo/keto reductase family UP15_RS01355 PF00465 Iron-containing alcohol dehydrogenase UP15_RS01360 PF12368 Rhodanase C-terminal UP15_RS01360 PF00581 Rhodanese-like domain UP15_RS01360 PF17773 UPF0176 acylphosphatase like domain UP15_RS01365 PF13520 Amino acid permease UP15_RS01375 PF00874 PRD domain UP15_RS01375 PF03123 CAT RNA binding domain UP15_RS01380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP15_RS01380 PF02378 Phosphotransferase system, EIIC UP15_RS01380 PF00367 phosphotransferase system, EIIB UP15_RS01385 PF00232 Glycosyl hydrolase family 1 UP15_RS01400 PF00874 PRD domain UP15_RS01400 PF08279 HTH domain UP15_RS01400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP15_RS01400 PF05043 Mga helix-turn-helix domain UP15_RS01405 PF00480 ROK family UP15_RS01410 PF01074 Glycosyl hydrolases family 38 N-terminal domain UP15_RS01410 PF09261 Alpha mannosidase middle domain UP15_RS01410 PF07748 Glycosyl hydrolases family 38 C-terminal domain UP15_RS01420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP15_RS01425 PF00381 PTS HPr component phosphorylation site UP15_RS01425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP15_RS01430 PF17936 Bacterial Ig domain UP15_RS01430 PF00082 Subtilase family UP15_RS01445 PF00324 Amino acid permease UP15_RS01450 PF02574 Homocysteine S-methyltransferase UP15_RS01455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP15_RS01455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP15_RS01460 PF03551 Transcriptional regulator PadR-like family UP15_RS01470 PF07690 Major Facilitator Superfamily UP15_RS01475 PF00583 Acetyltransferase (GNAT) family UP15_RS01490 PF00082 Subtilase family UP15_RS01495 PF01425 Amidase UP15_RS01500 PF00440 Bacterial regulatory proteins, tetR family UP15_RS01505 PF07883 Cupin domain UP15_RS01510 PF08240 Alcohol dehydrogenase GroES-like domain UP15_RS01510 PF00107 Zinc-binding dehydrogenase UP15_RS01510 PF13823 Alcohol dehydrogenase GroES-associated UP15_RS01515 PF01047 MarR family UP15_RS01520 PF13193 AMP-binding enzyme C-terminal domain UP15_RS01520 PF00501 AMP-binding enzyme UP15_RS01525 PF13520 Amino acid permease UP15_RS01535 PF00561 alpha/beta hydrolase fold UP15_RS01540 PF01235 Sodium:alanine symporter family UP15_RS01545 PF04960 Glutaminase UP15_RS01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS01555 PF00072 Response regulator receiver domain UP15_RS01555 PF08664 YcbB domain UP15_RS01560 PF05225 helix-turn-helix, Psq domain UP15_RS01560 PF02810 SEC-C motif UP15_RS01565 PF17118 Domain of unknown function (DUF5105) UP15_RS01565 PF11611 Domain of unknown function (DUF4352) UP15_RS01575 PF00248 Aldo/keto reductase family UP15_RS01580 PF14501 GHKL domain UP15_RS01585 PF04397 LytTr DNA-binding domain UP15_RS01585 PF00072 Response regulator receiver domain UP15_RS01590 PF00005 ABC transporter UP15_RS01595 PF12679 ABC-2 family transporter protein UP15_RS01610 PF17118 Domain of unknown function (DUF5105) UP15_RS01610 PF11611 Domain of unknown function (DUF4352) UP15_RS01615 PF07486 Cell Wall Hydrolase UP15_RS01630 PF00296 Luciferase-like monooxygenase UP15_RS01635 PF02342 TerD domain UP15_RS01640 PF02342 TerD domain UP15_RS01645 PF02342 TerD domain UP15_RS01650 PF03741 Integral membrane protein TerC family UP15_RS01675 PF14266 Putative component of 'biosynthetic module' UP15_RS01680 PF05816 Toxic anion resistance protein (TelA) UP15_RS01685 PF00005 ABC transporter UP15_RS01685 PF00571 CBS domain UP15_RS01690 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS01695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system UP15_RS01710 PF01546 Peptidase family M20/M25/M40 UP15_RS01710 PF07687 Peptidase dimerisation domain UP15_RS01715 PF03606 C4-dicarboxylate anaerobic carrier UP15_RS01720 PF00056 lactate/malate dehydrogenase, NAD binding domain UP15_RS01720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UP15_RS01725 PF02652 L-lactate permease UP15_RS01730 PF00356 Bacterial regulatory proteins, lacI family UP15_RS01735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UP15_RS01740 PF05116 Sucrose-6F-phosphate phosphohydrolase UP15_RS01745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UP15_RS01745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP15_RS01750 PF07690 Major Facilitator Superfamily UP15_RS01755 PF01810 LysE type translocator UP15_RS01765 PF10852 Protein of unknown function (DUF2651) UP15_RS01770 PF08892 YqcI/YcgG family UP15_RS01775 PF00324 Amino acid permease UP15_RS01780 PF09347 Domain of unknown function (DUF1989) UP15_RS01785 PF02540 NAD synthase UP15_RS01795 PF00171 Aldehyde dehydrogenase family UP15_RS01800 PF01487 Type I 3-dehydroquinase UP15_RS01805 PF00205 Thiamine pyrophosphate enzyme, central domain UP15_RS01805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP15_RS01805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP15_RS01815 PF02515 CoA-transferase family III UP15_RS01820 PF07690 Major Facilitator Superfamily UP15_RS01830 PF01614 Bacterial transcriptional regulator UP15_RS01830 PF09339 IclR helix-turn-helix domain UP15_RS01835 PF01202 Shikimate kinase UP15_RS01840 PF00701 Dihydrodipicolinate synthetase family UP15_RS01845 PF00356 Bacterial regulatory proteins, lacI family UP15_RS01850 PF07690 Major Facilitator Superfamily UP15_RS01855 PF08241 Methyltransferase domain UP15_RS01860 PF03466 LysR substrate binding domain UP15_RS01860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS01865 PF00795 Carbon-nitrogen hydrolase UP15_RS01870 PF05448 Acetyl xylan esterase (AXE1) UP15_RS01880 PF10127 RNA repair pathway DNA polymerase beta family UP15_RS01885 PF01619 Proline dehydrogenase UP15_RS01890 PF00171 Aldehyde dehydrogenase family UP15_RS01895 PF13556 PucR C-terminal helix-turn-helix domain UP15_RS01895 PF17853 GGDEF-like domain UP15_RS01900 PF02040 Arsenical pump membrane protein UP15_RS01905 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS01910 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP15_RS01915 PF10925 Protein of unknown function (DUF2680) UP15_RS01920 PF12706 Beta-lactamase superfamily domain UP15_RS01925 PF01037 Lrp/AsnC ligand binding domain UP15_RS01930 PF02522 Aminoglycoside 3-N-acetyltransferase UP15_RS01935 PF11033 Competence protein J (ComJ) UP15_RS01940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS01940 PF00672 HAMP domain UP15_RS01940 PF17202 Single cache domain 3 UP15_RS01945 PF14040 Deoxyribonuclease NucA/NucB UP15_RS01950 PF05378 Hydantoinase/oxoprolinase N-terminal region UP15_RS01950 PF01968 Hydantoinase/oxoprolinase UP15_RS01965 PF00005 ABC transporter UP15_RS01965 PF08402 TOBE domain UP15_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS01975 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS01980 PF00501 AMP-binding enzyme UP15_RS01980 PF13193 AMP-binding enzyme C-terminal domain UP15_RS01980 PF00550 Phosphopantetheine attachment site UP15_RS01980 PF00668 Condensation domain UP15_RS01985 PF00550 Phosphopantetheine attachment site UP15_RS01985 PF00501 AMP-binding enzyme UP15_RS01985 PF00668 Condensation domain UP15_RS01985 PF13193 AMP-binding enzyme C-terminal domain UP15_RS01990 PF00501 AMP-binding enzyme UP15_RS01990 PF00975 Thioesterase domain UP15_RS01990 PF00668 Condensation domain UP15_RS01990 PF00550 Phosphopantetheine attachment site UP15_RS01990 PF13193 AMP-binding enzyme C-terminal domain UP15_RS01995 PF00550 Phosphopantetheine attachment site UP15_RS01995 PF00668 Condensation domain UP15_RS01995 PF00501 AMP-binding enzyme UP15_RS01995 PF13193 AMP-binding enzyme C-terminal domain UP15_RS02000 PF00668 Condensation domain UP15_RS02000 PF00550 Phosphopantetheine attachment site UP15_RS02000 PF13193 AMP-binding enzyme C-terminal domain UP15_RS02000 PF00501 AMP-binding enzyme UP15_RS02005 PF00975 Thioesterase domain UP15_RS02010 PF00892 EamA-like transporter family UP15_RS02015 PF00392 Bacterial regulatory proteins, gntR family UP15_RS02015 PF00155 Aminotransferase class I and II UP15_RS02020 PF01648 4'-phosphopantetheinyl transferase superfamily UP15_RS02035 PF02872 5'-nucleotidase, C-terminal domain UP15_RS02035 PF00149 Calcineurin-like phosphoesterase UP15_RS02040 PF04203 Sortase domain UP15_RS02045 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin UP15_RS02045 PF18277 AbrB C-terminal domain UP15_RS02050 PF00005 ABC transporter UP15_RS02055 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS02060 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP15_RS02065 PF01738 Dienelactone hydrolase family UP15_RS02070 PF00324 Amino acid permease UP15_RS02075 PF00854 POT family UP15_RS02080 PF13229 Right handed beta helix region UP15_RS02080 PF12708 Pectate lyase superfamily protein UP15_RS02085 PF00296 Luciferase-like monooxygenase UP15_RS02090 PF00583 Acetyltransferase (GNAT) family UP15_RS02095 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP15_RS02100 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS02105 PF00005 ABC transporter UP15_RS02110 PF01546 Peptidase family M20/M25/M40 UP15_RS02110 PF07687 Peptidase dimerisation domain UP15_RS02115 PF03972 MmgE/PrpD family UP15_RS02125 PF00072 Response regulator receiver domain UP15_RS02125 PF00486 Transcriptional regulatory protein, C terminal UP15_RS02130 PF00672 HAMP domain UP15_RS02130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS02130 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS02135 PF01740 STAS domain UP15_RS02135 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain UP15_RS02140 PF13840 ACT domain UP15_RS02140 PF00696 Amino acid kinase family UP15_RS02145 PF07690 Major Facilitator Superfamily UP15_RS02150 PF00440 Bacterial regulatory proteins, tetR family UP15_RS02160 PF01022 Bacterial regulatory protein, arsR family UP15_RS02170 PF03466 LysR substrate binding domain UP15_RS02170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS02175 PF00392 Bacterial regulatory proteins, gntR family UP15_RS02175 PF00155 Aminotransferase class I and II UP15_RS02180 PF00202 Aminotransferase class-III UP15_RS02185 PF13520 Amino acid permease UP15_RS02190 PF00171 Aldehyde dehydrogenase family UP15_RS02195 PF02525 Flavodoxin-like fold UP15_RS02200 PF07987 Domain of unkown function (DUF1775) UP15_RS02205 PF04234 CopC domain UP15_RS02205 PF05425 Copper resistance protein D UP15_RS02205 PF13115 YtkA-like UP15_RS02210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP15_RS02210 PF02378 Phosphotransferase system, EIIC UP15_RS02215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP15_RS02220 PF01232 Mannitol dehydrogenase Rossmann domain UP15_RS02220 PF08125 Mannitol dehydrogenase C-terminal domain UP15_RS02225 PF02743 Cache domain UP15_RS02225 PF00672 HAMP domain UP15_RS02225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS02260 PF12681 Glyoxalase-like domain UP15_RS02265 PF05901 Excalibur calcium-binding domain UP15_RS02295 PF03746 LamB/YcsF family UP15_RS02300 PF01566 Natural resistance-associated macrophage protein UP15_RS02305 PF07286 Protein of unknown function (DUF1445) UP15_RS02310 PF02682 Carboxyltransferase domain, subdomain C and D UP15_RS02315 PF02626 Carboxyltransferase domain, subdomain A and B UP15_RS02320 PF09339 IclR helix-turn-helix domain UP15_RS02320 PF01614 Bacterial transcriptional regulator UP15_RS02325 PF02525 Flavodoxin-like fold UP15_RS02330 PF13472 GDSL-like Lipase/Acylhydrolase family UP15_RS02340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP15_RS02340 PF05043 Mga helix-turn-helix domain UP15_RS02340 PF08279 HTH domain UP15_RS02340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP15_RS02340 PF00874 PRD domain UP15_RS02345 PF13649 Methyltransferase domain UP15_RS02355 PF16242 Pyridoxamine 5'-phosphate oxidase like UP15_RS02375 PF12823 Domain of unknown function (DUF3817) UP15_RS02380 PF00392 Bacterial regulatory proteins, gntR family UP15_RS02380 PF07729 FCD domain UP15_RS02385 PF02311 AraC-like ligand binding domain UP15_RS02385 PF12833 Helix-turn-helix domain UP15_RS02390 PF00892 EamA-like transporter family UP15_RS02395 PF00180 Isocitrate/isopropylmalate dehydrogenase UP15_RS02400 PF01751 Toprim domain UP15_RS02400 PF01131 DNA topoisomerase UP15_RS02405 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP15_RS02420 PF00990 Diguanylate cyclase, GGDEF domain UP15_RS02425 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) UP15_RS02435 PF03170 Bacterial cellulose synthase subunit UP15_RS02440 PF13520 Amino acid permease UP15_RS02445 PF00205 Thiamine pyrophosphate enzyme, central domain UP15_RS02445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP15_RS02445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP15_RS02450 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues UP15_RS02450 PF04740 LXG domain of WXG superfamily UP15_RS02450 PF14449 Pre-toxin TG UP15_RS02460 PF04493 Endonuclease V UP15_RS02475 PF13302 Acetyltransferase (GNAT) domain UP15_RS02480 PF01566 Natural resistance-associated macrophage protein UP15_RS02485 PF04226 Transglycosylase associated protein UP15_RS02490 PF12787 EcsC protein family UP15_RS02495 PF03480 Bacterial extracellular solute-binding protein, family 7 UP15_RS02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS02500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP15_RS02500 PF17203 Single cache domain 3 UP15_RS02505 PF00072 Response regulator receiver domain UP15_RS02505 PF08279 HTH domain UP15_RS02510 PF00375 Sodium:dicarboxylate symporter family UP15_RS02515 PF01594 AI-2E family transporter UP15_RS02520 PF00375 Sodium:dicarboxylate symporter family UP15_RS02525 PF00005 ABC transporter UP15_RS02540 PF00085 Thioredoxin UP15_RS02545 PF01820 D-ala D-ala ligase N-terminus UP15_RS02545 PF07478 D-ala D-ala ligase C-terminus UP15_RS02550 PF01225 Mur ligase family, catalytic domain UP15_RS02550 PF02875 Mur ligase family, glutamate ligase domain UP15_RS02550 PF08245 Mur ligase middle domain UP15_RS02555 PF12146 Serine aminopeptidase, S33 UP15_RS02565 PF00271 Helicase conserved C-terminal domain UP15_RS02565 PF00270 DEAD/DEAH box helicase UP15_RS02570 PF03703 Bacterial PH domain UP15_RS02575 PF03703 Bacterial PH domain UP15_RS02580 PF01694 Rhomboid family UP15_RS02585 PF01648 4'-phosphopantetheinyl transferase superfamily UP15_RS02595 PF01168 Alanine racemase, N-terminal domain UP15_RS02595 PF00842 Alanine racemase, C-terminal domain UP15_RS02600 PF01402 Ribbon-helix-helix protein, copG family UP15_RS02605 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system UP15_RS02610 PF08678 Rsbr N terminal UP15_RS02610 PF01740 STAS domain UP15_RS02615 PF01740 STAS domain UP15_RS02620 PF13581 Histidine kinase-like ATPase domain UP15_RS02625 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain UP15_RS02625 PF07228 Stage II sporulation protein E (SpoIIE) UP15_RS02630 PF01740 STAS domain UP15_RS02635 PF13581 Histidine kinase-like ATPase domain UP15_RS02640 PF04545 Sigma-70, region 4 UP15_RS02640 PF04539 Sigma-70 region 3 UP15_RS02640 PF04542 Sigma-70 region 2 UP15_RS02645 PF07228 Stage II sporulation protein E (SpoIIE) UP15_RS02650 PF09371 Tex-like protein N-terminal domain UP15_RS02650 PF00575 S1 RNA binding domain UP15_RS02650 PF16921 Tex protein YqgF-like domain UP15_RS02650 PF17674 HHH domain UP15_RS02655 PF10263 SprT-like family UP15_RS02655 PF17283 SprT-like zinc ribbon domain UP15_RS02660 PF00676 Dehydrogenase E1 component UP15_RS02665 PF02779 Transketolase, pyrimidine binding domain UP15_RS02665 PF02780 Transketolase, C-terminal domain UP15_RS02670 PF02817 e3 binding domain UP15_RS02670 PF00364 Biotin-requiring enzyme UP15_RS02670 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP15_RS02675 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS02675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP15_RS02680 PF01590 GAF domain UP15_RS02680 PF02954 Bacterial regulatory protein, Fis family UP15_RS02680 PF00158 Sigma-54 interaction domain UP15_RS02735 PF00082 Subtilase family UP15_RS02740 PF00313 'Cold-shock' DNA-binding domain UP15_RS02745 PF02559 CarD-like/TRCF domain UP15_RS02750 PF00107 Zinc-binding dehydrogenase UP15_RS02750 PF08240 Alcohol dehydrogenase GroES-like domain UP15_RS02755 PF13411 MerR HTH family regulatory protein UP15_RS02760 PF00722 Glycosyl hydrolases family 16 UP15_RS02765 PF00440 Bacterial regulatory proteins, tetR family UP15_RS02770 PF07690 Major Facilitator Superfamily UP15_RS02775 PF07859 alpha/beta hydrolase fold UP15_RS02790 PF00106 short chain dehydrogenase UP15_RS02800 PF00710 Asparaginase, N-terminal UP15_RS02800 PF17763 Glutaminase/Asparaginase C-terminal domain UP15_RS02810 PF13333 Integrase core domain UP15_RS02810 PF00665 Integrase core domain UP15_RS02815 PF12697 Alpha/beta hydrolase family UP15_RS02830 PF16925 Tetracyclin repressor-like, C-terminal domain UP15_RS02830 PF00440 Bacterial regulatory proteins, tetR family UP15_RS02835 PF07690 Major Facilitator Superfamily UP15_RS02840 PF01757 Acyltransferase family UP15_RS02845 PF03176 MMPL family UP15_RS02850 PF07730 Histidine kinase UP15_RS02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS02855 PF00196 Bacterial regulatory proteins, luxR family UP15_RS02855 PF00072 Response regulator receiver domain UP15_RS02870 PF12746 GNAT acetyltransferase UP15_RS02885 PF00583 Acetyltransferase (GNAT) family UP15_RS02890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP15_RS02900 PF00440 Bacterial regulatory proteins, tetR family UP15_RS02905 PF01872 RibD C-terminal domain UP15_RS02910 PF01047 MarR family UP15_RS02915 PF00881 Nitroreductase family UP15_RS02930 PF07883 Cupin domain UP15_RS02930 PF01381 Helix-turn-helix UP15_RS02935 PF01810 LysE type translocator UP15_RS02940 PF00583 Acetyltransferase (GNAT) family UP15_RS02950 PF01596 O-methyltransferase UP15_RS02960 PF03591 AzlC protein UP15_RS02965 PF00892 EamA-like transporter family UP15_RS02975 PF00375 Sodium:dicarboxylate symporter family UP15_RS03015 PF00586 AIR synthase related protein, N-terminal domain UP15_RS03015 PF02769 AIR synthase related protein, C-terminal domain UP15_RS03020 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE UP15_RS03025 PF00814 Glycoprotease family UP15_RS03030 PF00583 Acetyltransferase (GNAT) family UP15_RS03035 PF00814 Glycoprotease family UP15_RS03040 PF16326 ABC transporter C-terminal domain UP15_RS03040 PF12848 ABC transporter UP15_RS03040 PF00005 ABC transporter UP15_RS03045 PF01967 MoaC family UP15_RS03050 PF02629 CoA binding domain UP15_RS03050 PF06971 Putative DNA-binding protein N-terminus UP15_RS03055 PF02416 mttA/Hcf106 family UP15_RS03060 PF00902 Sec-independent protein translocase protein (TatC) UP15_RS03070 PF14146 Domain of unknown function (DUF4305) UP15_RS03075 PF02517 CPBP intramembrane metalloprotease UP15_RS03080 PF00166 Chaperonin 10 Kd subunit UP15_RS03085 PF00118 TCP-1/cpn60 chaperonin family UP15_RS03090 PF01047 MarR family UP15_RS03095 PF00583 Acetyltransferase (GNAT) family UP15_RS03100 PF04299 Putative FMN-binding domain UP15_RS03130 PF03330 Lytic transglycolase UP15_RS03135 PF07676 WD40-like Beta Propeller Repeat UP15_RS03145 PF07731 Multicopper oxidase UP15_RS03145 PF07732 Multicopper oxidase UP15_RS03145 PF00394 Multicopper oxidase UP15_RS03150 PF00324 Amino acid permease UP15_RS03155 PF01545 Cation efflux family UP15_RS03155 PF16916 Dimerisation domain of Zinc Transporter UP15_RS03160 PF17863 AAA lid domain UP15_RS03160 PF07726 ATPase family associated with various cellular activities (AAA) UP15_RS03165 PF01882 Protein of unknown function DUF58 UP15_RS03170 PF01841 Transglutaminase-like superfamily UP15_RS03170 PF13559 Domain of unknown function (DUF4129) UP15_RS03170 PF11992 Domain of unknown function (DUF3488) UP15_RS03175 PF00958 GMP synthase C terminal domain UP15_RS03175 PF00117 Glutamine amidotransferase class-I UP15_RS03175 PF02540 NAD synthase UP15_RS03205 PF02486 Replication initiation factor UP15_RS03225 PF04073 Aminoacyl-tRNA editing domain UP15_RS03230 PF12833 Helix-turn-helix domain UP15_RS03235 PF08502 LeuA allosteric (dimerisation) domain UP15_RS03235 PF00682 HMGL-like UP15_RS03255 PF00082 Subtilase family UP15_RS03260 PF13302 Acetyltransferase (GNAT) domain UP15_RS03275 PF04542 Sigma-70 region 2 UP15_RS03275 PF08281 Sigma-70, region 4 UP15_RS03285 PF07690 Major Facilitator Superfamily UP15_RS03290 PF03466 LysR substrate binding domain UP15_RS03290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS03295 PF00860 Permease family UP15_RS03300 PF10055 Uncharacterized small protein (DUF2292) UP15_RS03310 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP15_RS03315 PF14044 NETI protein UP15_RS03320 PF00731 AIR carboxylase UP15_RS03325 PF02222 ATP-grasp domain UP15_RS03325 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain UP15_RS03330 PF10397 Adenylosuccinate lyase C-terminus UP15_RS03330 PF00206 Lyase UP15_RS03335 PF01259 SAICAR synthetase UP15_RS03340 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase UP15_RS03350 PF00586 AIR synthase related protein, N-terminal domain UP15_RS03350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain UP15_RS03350 PF02769 AIR synthase related protein, C-terminal domain UP15_RS03355 PF00156 Phosphoribosyl transferase domain UP15_RS03360 PF02769 AIR synthase related protein, C-terminal domain UP15_RS03360 PF00586 AIR synthase related protein, N-terminal domain UP15_RS03365 PF00551 Formyl transferase UP15_RS03370 PF02142 MGS-like domain UP15_RS03370 PF01808 AICARFT/IMPCHase bienzyme UP15_RS03375 PF02844 Phosphoribosylglycinamide synthetase, N domain UP15_RS03375 PF02843 Phosphoribosylglycinamide synthetase, C domain UP15_RS03375 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain UP15_RS03395 PF00202 Aminotransferase class-III UP15_RS03400 PF01144 Coenzyme A transferase UP15_RS03405 PF01144 Coenzyme A transferase UP15_RS03410 PF01546 Peptidase family M20/M25/M40 UP15_RS03410 PF07687 Peptidase dimerisation domain UP15_RS03415 PF11127 Protein of unknown function (DUF2892) UP15_RS03420 PF01979 Amidohydrolase family UP15_RS03420 PF13382 Adenine deaminase C-terminal domain UP15_RS03425 PF01371 Trp repressor protein UP15_RS03430 PF01381 Helix-turn-helix UP15_RS03435 PF01645 Conserved region in glutamate synthase UP15_RS03450 PF01884 PcrB family UP15_RS03455 PF00580 UvrD/REP helicase N-terminal domain UP15_RS03455 PF13361 UvrD-like helicase C-terminal domain UP15_RS03460 PF03119 NAD-dependent DNA ligase C4 zinc finger domain UP15_RS03460 PF03120 NAD-dependent DNA ligase OB-fold domain UP15_RS03460 PF12826 Helix-hairpin-helix motif UP15_RS03460 PF01653 NAD-dependent DNA ligase adenylation domain UP15_RS03460 PF00533 BRCA1 C Terminus (BRCT) domain UP15_RS03465 PF07537 CamS sex pheromone cAM373 precursor UP15_RS03475 PF00501 AMP-binding enzyme UP15_RS03475 PF13193 AMP-binding enzyme C-terminal domain UP15_RS03475 PF00668 Condensation domain UP15_RS03475 PF00550 Phosphopantetheine attachment site UP15_RS03480 PF00144 Beta-lactamase UP15_RS03490 PF00975 Thioesterase domain UP15_RS03495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UP15_RS03495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UP15_RS03510 PF02770 Acyl-CoA dehydrogenase, middle domain UP15_RS03510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP15_RS03510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP15_RS03515 PF00501 AMP-binding enzyme UP15_RS03515 PF13193 AMP-binding enzyme C-terminal domain UP15_RS03515 PF00668 Condensation domain UP15_RS03515 PF00550 Phosphopantetheine attachment site UP15_RS03520 PF00550 Phosphopantetheine attachment site UP15_RS03520 PF13193 AMP-binding enzyme C-terminal domain UP15_RS03520 PF00501 AMP-binding enzyme UP15_RS03520 PF00668 Condensation domain UP15_RS03525 PF00550 Phosphopantetheine attachment site UP15_RS03525 PF00109 Beta-ketoacyl synthase, N-terminal domain UP15_RS03525 PF00668 Condensation domain UP15_RS03525 PF16197 Ketoacyl-synthetase C-terminal extension UP15_RS03525 PF02801 Beta-ketoacyl synthase, C-terminal domain UP15_RS03525 PF00698 Acyl transferase domain UP15_RS03530 PF16197 Ketoacyl-synthetase C-terminal extension UP15_RS03530 PF00550 Phosphopantetheine attachment site UP15_RS03530 PF00668 Condensation domain UP15_RS03530 PF00698 Acyl transferase domain UP15_RS03530 PF02801 Beta-ketoacyl synthase, C-terminal domain UP15_RS03530 PF00109 Beta-ketoacyl synthase, N-terminal domain UP15_RS03535 PF02801 Beta-ketoacyl synthase, C-terminal domain UP15_RS03535 PF00698 Acyl transferase domain UP15_RS03535 PF00109 Beta-ketoacyl synthase, N-terminal domain UP15_RS03535 PF00550 Phosphopantetheine attachment site UP15_RS03535 PF00668 Condensation domain UP15_RS03535 PF16197 Ketoacyl-synthetase C-terminal extension UP15_RS03540 PF01636 Phosphotransferase enzyme family UP15_RS03545 PF00245 Alkaline phosphatase UP15_RS03550 PF02308 MgtC family UP15_RS03555 PF00474 Sodium:solute symporter family UP15_RS03560 PF02686 Glu-tRNAGln amidotransferase C subunit UP15_RS03565 PF01425 Amidase UP15_RS03570 PF02637 GatB domain UP15_RS03570 PF02934 GatB/GatE catalytic domain UP15_RS03575 PF00440 Bacterial regulatory proteins, tetR family UP15_RS03580 PF00873 AcrB/AcrD/AcrF family UP15_RS03585 PF01156 Inosine-uridine preferring nucleoside hydrolase UP15_RS03590 PF00781 Diacylglycerol kinase catalytic domain UP15_RS03595 PF05958 tRNA (Uracil-5-)-methyltransferase UP15_RS03595 PF01938 TRAM domain UP15_RS03605 PF02384 N-6 DNA Methylase UP15_RS03610 PF01207 Dihydrouridine synthase (Dus) UP15_RS03625 PF02082 Transcriptional regulator UP15_RS03630 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS03640 PF13021 Domain of unknown function (DUF3885) UP15_RS03645 PF02056 Family 4 glycosyl hydrolase UP15_RS03645 PF11975 Family 4 glycosyl hydrolase C-terminal domain UP15_RS03650 PF01418 Helix-turn-helix domain, rpiR family UP15_RS03650 PF01380 SIS domain UP15_RS03655 PF07690 Major Facilitator Superfamily UP15_RS03665 PF03466 LysR substrate binding domain UP15_RS03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS03675 PF13039 Protein of unknown function (DUF3900) UP15_RS03675 PF13037 Domain of unknown function (DUF3898) UP15_RS03680 PF00483 Nucleotidyl transferase UP15_RS03685 PF16363 GDP-mannose 4,6 dehydratase UP15_RS03690 PF03407 Nucleotide-diphospho-sugar transferase UP15_RS03695 PF00535 Glycosyl transferase family 2 UP15_RS03700 PF03407 Nucleotide-diphospho-sugar transferase UP15_RS03705 PF07690 Major Facilitator Superfamily UP15_RS03710 PF05223 NTF2-like N-terminal transpeptidase domain UP15_RS03710 PF03717 Penicillin-binding Protein dimerisation domain UP15_RS03710 PF00905 Penicillin binding protein transpeptidase domain UP15_RS03715 PF00939 Sodium:sulfate symporter transmembrane region UP15_RS03730 PF00011 Hsp20/alpha crystallin family UP15_RS03745 PF13520 Amino acid permease UP15_RS03750 PF13181 Tetratricopeptide repeat UP15_RS03750 PF00535 Glycosyl transferase family 2 UP15_RS03755 PF16326 ABC transporter C-terminal domain UP15_RS03755 PF00005 ABC transporter UP15_RS03755 PF12848 ABC transporter UP15_RS03765 PF02649 Type I GTP cyclohydrolase folE2 UP15_RS03770 PF13411 MerR HTH family regulatory protein UP15_RS03775 PF07690 Major Facilitator Superfamily UP15_RS03780 PF00005 ABC transporter UP15_RS03780 PF12848 ABC transporter UP15_RS03785 PF00271 Helicase conserved C-terminal domain UP15_RS03785 PF00270 DEAD/DEAH box helicase UP15_RS03790 PF00107 Zinc-binding dehydrogenase UP15_RS03790 PF16884 N-terminal domain of oxidoreductase UP15_RS03795 PF11486 Protein of unknown function (DUF3212) UP15_RS03800 PF11181 Heat induced stress protein YflT UP15_RS03810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UP15_RS03810 PF00925 GTP cyclohydrolase II UP15_RS03815 PF03781 Sulfatase-modifying factor enzyme 1 UP15_RS03825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP15_RS03825 PF01872 RibD C-terminal domain UP15_RS03835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP15_RS03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS03840 PF08279 HTH domain UP15_RS03840 PF12431 Transcriptional regulator UP15_RS03840 PF00072 Response regulator receiver domain UP15_RS03845 PF03401 Tripartite tricarboxylate transporter family receptor UP15_RS03850 PF03600 Citrate transporter UP15_RS03860 PF05870 Phenolic acid decarboxylase (PAD) UP15_RS03865 PF03551 Transcriptional regulator PadR-like family UP15_RS03865 PF10400 Virulence activator alpha C-term UP15_RS03870 PF02898 Nitric oxide synthase, oxygenase domain UP15_RS03880 PF00708 Acylphosphatase UP15_RS03885 PF03473 MOSC domain UP15_RS03885 PF03475 3-alpha domain UP15_RS03890 PF00557 Metallopeptidase family M24 UP15_RS03895 PF02378 Phosphotransferase system, EIIC UP15_RS03895 PF00367 phosphotransferase system, EIIB UP15_RS03900 PF05675 Protein of unknown function (DUF817) UP15_RS03910 PF14172 Domain of unknown function (DUF4309) UP15_RS03915 PF00884 Sulfatase UP15_RS03920 PF00282 Pyridoxal-dependent decarboxylase conserved domain UP15_RS03925 PF00672 HAMP domain UP15_RS03925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS03930 PF09350 Domain of unknown function (DUF1992) UP15_RS03935 PF00367 phosphotransferase system, EIIB UP15_RS03935 PF02378 Phosphotransferase system, EIIC UP15_RS03940 PF00128 Alpha amylase, catalytic domain UP15_RS03940 PF16657 Maltogenic Amylase, C-terminal domain UP15_RS03945 PF07702 UTRA domain UP15_RS03945 PF00392 Bacterial regulatory proteins, gntR family UP15_RS03955 PF02872 5'-nucleotidase, C-terminal domain UP15_RS03955 PF00149 Calcineurin-like phosphoesterase UP15_RS03960 PF01965 DJ-1/PfpI family UP15_RS03965 PF06569 Protein of unknown function (DUF1128) UP15_RS03970 PF01235 Sodium:alanine symporter family UP15_RS03975 PF01451 Low molecular weight phosphotyrosine protein phosphatase UP15_RS03985 PF03631 Virulence factor BrkB UP15_RS03990 PF07690 Major Facilitator Superfamily UP15_RS04000 PF01699 Sodium/calcium exchanger protein UP15_RS04005 PF14167 YfkD-like protein UP15_RS04010 PF01709 Transcriptional regulator UP15_RS04020 PF00924 Mechanosensitive ion channel UP15_RS04025 PF08756 YfkB-like domain UP15_RS04025 PF04055 Radical SAM superfamily UP15_RS04035 PF01522 Polysaccharide deacetylase UP15_RS04040 PF10898 Protein of unknown function (DUF2716) UP15_RS04045 PF01544 CorA-like Mg2+ transporter protein UP15_RS04055 PF00730 HhH-GPD superfamily base excision DNA repair protein UP15_RS04060 PF01938 TRAM domain UP15_RS04060 PF05958 tRNA (Uracil-5-)-methyltransferase UP15_RS04090 PF13411 MerR HTH family regulatory protein UP15_RS04090 PF07739 TipAS antibiotic-recognition domain UP15_RS04095 PF07690 Major Facilitator Superfamily UP15_RS04145 PF00893 Small Multidrug Resistance protein UP15_RS04150 PF00893 Small Multidrug Resistance protein UP15_RS04155 PF00440 Bacterial regulatory proteins, tetR family UP15_RS04155 PF17934 Tetracyclin repressor-like, C-terminal domain UP15_RS04170 PF00657 GDSL-like Lipase/Acylhydrolase UP15_RS04175 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS04180 PF12833 Helix-turn-helix domain UP15_RS04180 PF02805 Metal binding domain of Ada UP15_RS04185 PF01497 Periplasmic binding protein UP15_RS04190 PF00005 ABC transporter UP15_RS04190 PF00664 ABC transporter transmembrane region UP15_RS04195 PF02694 Uncharacterised BCR, YnfA/UPF0060 family UP15_RS04200 PF04545 Sigma-70, region 4 UP15_RS04200 PF04542 Sigma-70 region 2 UP15_RS04215 PF08240 Alcohol dehydrogenase GroES-like domain UP15_RS04215 PF00107 Zinc-binding dehydrogenase UP15_RS04220 PF12867 DinB superfamily UP15_RS04230 PF01047 MarR family UP15_RS04235 PF03706 Lysylphosphatidylglycerol synthase TM region UP15_RS04235 PF09924 Uncharacterised conserved protein (DUF2156) UP15_RS04250 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS04255 PF00881 Nitroreductase family UP15_RS04265 PF08338 Domain of unknown function (DUF1731) UP15_RS04265 PF01370 NAD dependent epimerase/dehydratase family UP15_RS04270 PF02631 RecX family UP15_RS04275 PF08838 Protein of unknown function (DUF1811) UP15_RS04280 PF08176 Small acid-soluble spore protein K family UP15_RS04285 PF14043 WVELL protein UP15_RS04290 PF00535 Glycosyl transferase family 2 UP15_RS04295 PF09586 Bacterial membrane protein YfhO UP15_RS04300 PF01494 FAD binding domain UP15_RS04315 PF00190 Cupin UP15_RS04320 PF04545 Sigma-70, region 4 UP15_RS04330 PF04307 LexA-binding, inner membrane-associated putative hydrolase UP15_RS04335 PF14815 NUDIX domain UP15_RS04335 PF00730 HhH-GPD superfamily base excision DNA repair protein UP15_RS04350 PF04259 Small, acid-soluble spore protein, gamma-type UP15_RS04360 PF04167 Protein of unknown function (DUF402) UP15_RS04365 PF00005 ABC transporter UP15_RS04365 PF00664 ABC transporter transmembrane region UP15_RS04370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP15_RS04370 PF00005 ABC transporter UP15_RS04375 PF00005 ABC transporter UP15_RS04375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP15_RS04380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP15_RS04385 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS04390 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS04390 PF12911 N-terminal TM domain of oligopeptide transport permease C UP15_RS04395 PF06081 Aromatic acid exporter family member 1 UP15_RS04400 PF00202 Aminotransferase class-III UP15_RS04405 PF00578 AhpC/TSA family UP15_RS04410 PF01475 Ferric uptake regulator family UP15_RS04415 PF11023 Zinc-ribbon containing domain UP15_RS04420 PF18576 Helix-turn-helix domain UP15_RS04420 PF14540 Nucleotidyltransferase-like UP15_RS04560 PF00884 Sulfatase UP15_RS04565 PF10502 Signal peptidase, peptidase S26 UP15_RS04575 PF01053 Cys/Met metabolism PLP-dependent enzyme UP15_RS04585 PF00005 ABC transporter UP15_RS04590 PF09084 NMT1/THI5 like UP15_RS04595 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS04600 PF00296 Luciferase-like monooxygenase UP15_RS04610 PF00005 ABC transporter UP15_RS04645 PF08331 Domain of unknown function (DUF1730) UP15_RS04650 PF12671 Putative amidase domain UP15_RS04655 PF00588 SpoU rRNA Methylase family UP15_RS04660 PF06798 PrkA serine protein kinase C-terminal domain UP15_RS04660 PF08298 PrkA AAA domain UP15_RS04665 PF04285 Protein of unknown function (DUF444) UP15_RS04675 PF07690 Major Facilitator Superfamily UP15_RS04680 PF03358 NADPH-dependent FMN reductase UP15_RS04690 PF00313 'Cold-shock' DNA-binding domain UP15_RS04710 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) UP15_RS04720 PF07875 Coat F domain UP15_RS04725 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS04725 PF00989 PAS fold UP15_RS04725 PF13188 PAS domain UP15_RS04725 PF13426 PAS domain UP15_RS04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS04730 PF00746 LPXTG cell wall anchor motif UP15_RS04730 PF00149 Calcineurin-like phosphoesterase UP15_RS04730 PF00565 Staphylococcal nuclease homologue UP15_RS04730 PF02872 5'-nucleotidase, C-terminal domain UP15_RS04735 PF04203 Sortase domain UP15_RS04740 PF01479 S4 domain UP15_RS04740 PF00849 RNA pseudouridylate synthase UP15_RS04750 PF13419 Haloacid dehalogenase-like hydrolase UP15_RS04755 PF00583 Acetyltransferase (GNAT) family UP15_RS04755 PF00795 Carbon-nitrogen hydrolase UP15_RS04775 PF17853 GGDEF-like domain UP15_RS04775 PF13556 PucR C-terminal helix-turn-helix domain UP15_RS04775 PF05651 Putative sugar diacid recognition UP15_RS04780 PF00202 Aminotransferase class-III UP15_RS04785 PF04309 Glycerol-3-phosphate responsive antiterminator UP15_RS04790 PF00230 Major intrinsic protein UP15_RS04795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UP15_RS04795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UP15_RS04800 PF01266 FAD dependent oxidoreductase UP15_RS04800 PF16901 C-terminal domain of alpha-glycerophosphate oxidase UP15_RS04805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UP15_RS04805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UP15_RS04805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UP15_RS04805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UP15_RS04810 PF13185 GAF domain UP15_RS04810 PF07730 Histidine kinase UP15_RS04815 PF00196 Bacterial regulatory proteins, luxR family UP15_RS04815 PF00072 Response regulator receiver domain UP15_RS04820 PF14148 YhdB-like protein UP15_RS04825 PF13028 Protein of unknown function (DUF3889) UP15_RS04830 PF00199 Catalase UP15_RS04830 PF06628 Catalase-related immune-responsive UP15_RS04835 PF02082 Transcriptional regulator UP15_RS04840 PF00970 Oxidoreductase FAD-binding domain UP15_RS04840 PF00175 Oxidoreductase NAD-binding domain UP15_RS04840 PF00042 Globin UP15_RS04845 PF04293 SpoVR like protein UP15_RS04850 PF00245 Alkaline phosphatase UP15_RS04855 PF00877 NlpC/P60 family UP15_RS04855 PF01476 LysM domain UP15_RS04860 PF17453 Sigma-M inhibitor UP15_RS04865 PF13791 Sigma factor regulator C-terminal UP15_RS04865 PF13800 Sigma factor regulator N-terminal UP15_RS04870 PF04542 Sigma-70 region 2 UP15_RS04870 PF08281 Sigma-70, region 4 UP15_RS04875 PF01553 Acyltransferase UP15_RS04880 PF01595 Cyclin M transmembrane N-terminal domain UP15_RS04880 PF03471 Transporter associated domain UP15_RS04880 PF00571 CBS domain UP15_RS04885 PF13411 MerR HTH family regulatory protein UP15_RS04890 PF00571 CBS domain UP15_RS04890 PF03471 Transporter associated domain UP15_RS04890 PF01595 Cyclin M transmembrane N-terminal domain UP15_RS04900 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UP15_RS04905 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UP15_RS04910 PF03009 Glycerophosphoryl diester phosphodiesterase family UP15_RS04915 PF00924 Mechanosensitive ion channel UP15_RS04920 PF02146 Sir2 family UP15_RS04925 PF01522 Polysaccharide deacetylase UP15_RS04930 PF01063 Amino-transferase class IV UP15_RS04935 PF00582 Universal stress protein family UP15_RS04940 PF00664 ABC transporter transmembrane region UP15_RS04940 PF00005 ABC transporter UP15_RS04945 PF00005 ABC transporter UP15_RS04945 PF00664 ABC transporter transmembrane region UP15_RS04955 PF13460 NAD(P)H-binding UP15_RS04960 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP15_RS04965 PF17912 MalK OB fold domain UP15_RS04965 PF00005 ABC transporter UP15_RS04965 PF03459 TOBE domain UP15_RS04970 PF13556 PucR C-terminal helix-turn-helix domain UP15_RS04975 PF17277 Family of unknown function (DUF5342) UP15_RS04980 PF14398 YheC/D like ATP-grasp UP15_RS04985 PF14398 YheC/D like ATP-grasp UP15_RS04990 PF04286 Protein of unknown function (DUF445) UP15_RS04995 PF06133 Control of competence regulator ComK, YlbF/YmcA UP15_RS05005 PF04055 Radical SAM superfamily UP15_RS05010 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) UP15_RS05015 PF00999 Sodium/hydrogen exchanger family UP15_RS05020 PF02080 TrkA-C domain UP15_RS05030 PF00378 Enoyl-CoA hydratase/isomerase UP15_RS05035 PF14120 YhzD-like protein UP15_RS05040 PF00149 Calcineurin-like phosphoesterase UP15_RS05045 PF13514 AAA domain UP15_RS05050 PF01966 HD domain UP15_RS05055 PF14147 Sporulation protein YhaL UP15_RS05065 PF09680 Family of unknown function UP15_RS05070 PF11667 Putative zincin peptidase UP15_RS05075 PF08963 Protein of unknown function (DUF1878) UP15_RS05080 PF01047 MarR family UP15_RS05085 PF12732 YtxH-like protein UP15_RS05095 PF17099 Tryptophan transporter TrpP UP15_RS05100 PF00266 Aminotransferase class-V UP15_RS05105 PF01230 HIT domain UP15_RS05110 PF00005 ABC transporter UP15_RS05115 PF05975 Bacterial ABC transporter protein EcsB UP15_RS05120 PF12787 EcsC protein family UP15_RS05125 PF01546 Peptidase family M20/M25/M40 UP15_RS05125 PF07687 Peptidase dimerisation domain UP15_RS05135 PF03992 Antibiotic biosynthesis monooxygenase UP15_RS05140 PF00912 Transglycosylase UP15_RS05140 PF00905 Penicillin binding protein transpeptidase domain UP15_RS05145 PF01208 Uroporphyrinogen decarboxylase (URO-D) UP15_RS05150 PF00762 Ferrochelatase UP15_RS05155 PF01593 Flavin containing amine oxidoreductase UP15_RS05160 PF17932 Tetracyclin repressor-like, C-terminal domain UP15_RS05160 PF00440 Bacterial regulatory proteins, tetR family UP15_RS05175 PF05343 M42 glutamyl aminopeptidase UP15_RS05180 PF00375 Sodium:dicarboxylate symporter family UP15_RS05185 PF12706 Beta-lactamase superfamily domain UP15_RS05190 PF10437 Bacterial lipoate protein ligase C-terminus UP15_RS05190 PF03099 Biotin/lipoate A/B protein ligase family UP15_RS05195 PF13193 AMP-binding enzyme C-terminal domain UP15_RS05195 PF00501 AMP-binding enzyme UP15_RS05205 PF01435 Peptidase family M48 UP15_RS05205 PF16491 CAAX prenyl protease N-terminal, five membrane helices UP15_RS05210 PF05922 Peptidase inhibitor I9 UP15_RS05210 PF00082 Subtilase family UP15_RS05215 PF00300 Histidine phosphatase superfamily (branch 1) UP15_RS05220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS05225 PF01266 FAD dependent oxidoreductase UP15_RS05225 PF00355 Rieske [2Fe-2S] domain UP15_RS05235 PF08858 IDEAL domain UP15_RS05240 PF06338 ComK protein UP15_RS05245 PF14031 Putative serine dehydratase domain UP15_RS05245 PF01168 Alanine racemase, N-terminal domain UP15_RS05255 PF00392 Bacterial regulatory proteins, gntR family UP15_RS05255 PF00155 Aminotransferase class I and II UP15_RS05260 PF07690 Major Facilitator Superfamily UP15_RS05265 PF01337 Barstar (barnase inhibitor) UP15_RS05270 PF01032 FecCD transport family UP15_RS05275 PF01032 FecCD transport family UP15_RS05280 PF00005 ABC transporter UP15_RS05285 PF01497 Periplasmic binding protein UP15_RS05290 PF03816 Cell envelope-related transcriptional attenuator domain UP15_RS05305 PF09335 SNARE associated Golgi protein UP15_RS05310 PF10502 Signal peptidase, peptidase S26 UP15_RS05315 PF05145 Transition state regulatory protein AbrB UP15_RS05330 PF07681 DoxX UP15_RS05335 PF02915 Rubrerythrin UP15_RS05340 PF12705 PD-(D/E)XK nuclease superfamily UP15_RS05345 PF12705 PD-(D/E)XK nuclease superfamily UP15_RS05345 PF00580 UvrD/REP helicase N-terminal domain UP15_RS05345 PF13361 UvrD-like helicase C-terminal domain UP15_RS05350 PF12320 Type 5 capsule protein repressor C-terminal domain UP15_RS05350 PF00149 Calcineurin-like phosphoesterase UP15_RS05355 PF13476 AAA domain UP15_RS05365 PF10676 Spore germination protein gerPA/gerPF UP15_RS05370 PF10970 Spore germination protein GerPE UP15_RS05380 PF10737 Spore germination protein GerPC UP15_RS05385 PF10803 Spore germination GerPB UP15_RS05390 PF10676 Spore germination protein gerPA/gerPF UP15_RS05400 PF08757 CotH kinase protein UP15_RS05410 PF01557 Fumarylacetoacetate (FAA) hydrolase family UP15_RS05415 PF07457 Protein of unknown function (DUF1516) UP15_RS05420 PF10949 Protein of unknown function (DUF2777) UP15_RS05425 PF00733 Asparagine synthase UP15_RS05425 PF13537 Glutamine amidotransferase domain UP15_RS05430 PF01593 Flavin containing amine oxidoreductase UP15_RS05435 PF01593 Flavin containing amine oxidoreductase UP15_RS05445 PF01554 MatE UP15_RS05450 PF02311 AraC-like ligand binding domain UP15_RS05450 PF12833 Helix-turn-helix domain UP15_RS05470 PF00202 Aminotransferase class-III UP15_RS05475 PF00282 Pyridoxal-dependent decarboxylase conserved domain UP15_RS05480 PF04183 IucA / IucC family UP15_RS05480 PF06276 Ferric iron reductase FhuF-like transporter UP15_RS05490 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) UP15_RS05495 PF06276 Ferric iron reductase FhuF-like transporter UP15_RS05495 PF04183 IucA / IucC family UP15_RS05510 PF02310 B12 binding domain UP15_RS05510 PF02965 Vitamin B12 dependent methionine synthase, activation domain UP15_RS05510 PF00809 Pterin binding enzyme UP15_RS05510 PF02574 Homocysteine S-methyltransferase UP15_RS05510 PF02607 B12 binding domain UP15_RS05515 PF02574 Homocysteine S-methyltransferase UP15_RS05515 PF02219 Methylenetetrahydrofolate reductase UP15_RS05520 PF04461 Protein of unknown function (DUF520) UP15_RS05525 PF17783 CvfB-like winged helix domain UP15_RS05525 PF13509 S1 domain UP15_RS05530 PF02608 ABC transporter substrate-binding protein PnrA-like UP15_RS05535 PF02743 Cache domain UP15_RS05535 PF00672 HAMP domain UP15_RS05535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS05540 PF02645 Uncharacterised protein, DegV family COG1307 UP15_RS05545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP15_RS05545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP15_RS05550 PF12690 Intracellular proteinase inhibitor UP15_RS05555 PF12758 Protein of unknown function (DUF3813) UP15_RS05570 PF00326 Prolyl oligopeptidase family UP15_RS05575 PF01883 Iron-sulfur cluster assembly protein UP15_RS05580 PF01565 FAD binding domain UP15_RS05585 PF07690 Major Facilitator Superfamily UP15_RS05590 PF01118 Semialdehyde dehydrogenase, NAD binding domain UP15_RS05590 PF02774 Semialdehyde dehydrogenase, dimerisation domain UP15_RS05595 PF01960 ArgJ family UP15_RS05600 PF00696 Amino acid kinase family UP15_RS05605 PF00202 Aminotransferase class-III UP15_RS05610 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UP15_RS05610 PF00117 Glutamine amidotransferase class-I UP15_RS05615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UP15_RS05615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP15_RS05620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UP15_RS05620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UP15_RS05625 PF14168 YjzC-like protein UP15_RS05630 PF07690 Major Facilitator Superfamily UP15_RS05635 PF11151 Protein of unknown function (DUF2929) UP15_RS05650 PF02608 ABC transporter substrate-binding protein PnrA-like UP15_RS05655 PF10815 ComZ UP15_RS05665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UP15_RS05665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UP15_RS05670 PF02801 Beta-ketoacyl synthase, C-terminal domain UP15_RS05670 PF00109 Beta-ketoacyl synthase, N-terminal domain UP15_RS05675 PF10026 Predicted Zn-dependent protease (DUF2268) UP15_RS05680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP15_RS05680 PF00005 ABC transporter UP15_RS05685 PF00005 ABC transporter UP15_RS05685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP15_RS05690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP15_RS05695 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS05700 PF12911 N-terminal TM domain of oligopeptide transport permease C UP15_RS05700 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS05705 PF12227 Protein of unknown function (DUF3603) UP15_RS05710 PF00579 tRNA synthetases class I (W and Y) UP15_RS05720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP15_RS05725 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS05730 PF12911 N-terminal TM domain of oligopeptide transport permease C UP15_RS05730 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS05735 PF00005 ABC transporter UP15_RS05735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP15_RS05740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP15_RS05740 PF00005 ABC transporter UP15_RS05750 PF13508 Acetyltransferase (GNAT) domain UP15_RS05755 PF03960 ArsC family UP15_RS05760 PF03741 Integral membrane protein TerC family UP15_RS05765 PF05389 Negative regulator of genetic competence (MecA) UP15_RS05770 PF13091 PLD-like domain UP15_RS05770 PF13396 Phospholipase_D-nuclease N-terminal UP15_RS05780 PF01432 Peptidase family M3 UP15_RS05780 PF08439 Oligopeptidase F UP15_RS05790 PF01152 Bacterial-like globin UP15_RS05795 PF01464 Transglycosylase SLT domain UP15_RS05800 PF01928 CYTH domain UP15_RS05810 PF04607 Region found in RelA / SpoT proteins UP15_RS05815 PF01513 ATP-NAD kinase UP15_RS05820 PF00849 RNA pseudouridylate synthase UP15_RS05825 PF00149 Calcineurin-like phosphoesterase UP15_RS05830 PF02080 TrkA-C domain UP15_RS05830 PF02254 TrkA-N domain UP15_RS05830 PF00999 Sodium/hydrogen exchanger family UP15_RS05835 PF03070 TENA/THI-4/PQQC family UP15_RS05840 PF02581 Thiamine monophosphate synthase UP15_RS05845 PF01266 FAD dependent oxidoreductase UP15_RS05850 PF02597 ThiS family UP15_RS05855 PF05690 Thiazole biosynthesis protein ThiG UP15_RS05860 PF00899 ThiF family UP15_RS05865 PF08543 Phosphomethylpyrimidine kinase UP15_RS05875 PF14153 Spore coat protein CotO UP15_RS05880 PF10612 Spore coat protein Z UP15_RS05885 PF10612 Spore coat protein Z UP15_RS05890 PF07552 Spore Coat Protein X and V domain UP15_RS05900 PF07552 Spore Coat Protein X and V domain UP15_RS05905 PF07098 Protein of unknown function (DUF1360) UP15_RS05920 PF14069 Stage VI sporulation protein F UP15_RS05925 PF13361 UvrD-like helicase C-terminal domain UP15_RS05925 PF00580 UvrD/REP helicase N-terminal domain UP15_RS05935 PF13333 Integrase core domain UP15_RS05935 PF13276 HTH-like domain UP15_RS05935 PF00665 Integrase core domain UP15_RS05945 PF13673 Acetyltransferase (GNAT) domain UP15_RS05955 PF00756 Putative esterase UP15_RS05960 PF01053 Cys/Met metabolism PLP-dependent enzyme UP15_RS05965 PF01053 Cys/Met metabolism PLP-dependent enzyme UP15_RS05985 PF01810 LysE type translocator UP15_RS05995 PF13673 Acetyltransferase (GNAT) domain UP15_RS06005 PF00302 Chloramphenicol acetyltransferase UP15_RS06030 PF10852 Protein of unknown function (DUF2651) UP15_RS06045 PF03466 LysR substrate binding domain UP15_RS06045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS06050 PF01177 Asp/Glu/Hydantoin racemase UP15_RS06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS06065 PF03466 LysR substrate binding domain UP15_RS06070 PF07690 Major Facilitator Superfamily UP15_RS06095 PF01168 Alanine racemase, N-terminal domain UP15_RS06095 PF00842 Alanine racemase, C-terminal domain UP15_RS06100 PF08240 Alcohol dehydrogenase GroES-like domain UP15_RS06100 PF00107 Zinc-binding dehydrogenase UP15_RS06115 PF00669 Bacterial flagellin N-terminal helical region UP15_RS06115 PF00700 Bacterial flagellin C-terminal helical region UP15_RS06120 PF00669 Bacterial flagellin N-terminal helical region UP15_RS06120 PF00700 Bacterial flagellin C-terminal helical region UP15_RS06125 PF01494 FAD binding domain UP15_RS06140 PF05908 Poly-gamma-glutamate hydrolase UP15_RS06145 PF06114 IrrE N-terminal-like domain UP15_RS06150 PF01510 N-acetylmuramoyl-L-alanine amidase UP15_RS06150 PF01471 Putative peptidoglycan binding domain UP15_RS06150 PF01476 LysM domain UP15_RS06155 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system UP15_RS06160 PF14171 Toxin SpoIISA, type II toxin-antitoxin system UP15_RS06165 PF01384 Phosphate transporter family UP15_RS06170 PF01865 Protein of unknown function DUF47 UP15_RS06190 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS06195 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS06200 PF17850 CysA C-terminal regulatory domain UP15_RS06200 PF12857 TOBE-like domain UP15_RS06200 PF00005 ABC transporter UP15_RS06210 PF03611 PTS system sugar-specific permease component UP15_RS06225 PF00107 Zinc-binding dehydrogenase UP15_RS06225 PF08240 Alcohol dehydrogenase GroES-like domain UP15_RS06230 PF00676 Dehydrogenase E1 component UP15_RS06235 PF02779 Transketolase, pyrimidine binding domain UP15_RS06235 PF00364 Biotin-requiring enzyme UP15_RS06235 PF02780 Transketolase, C-terminal domain UP15_RS06240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP15_RS06240 PF02817 e3 binding domain UP15_RS06240 PF00364 Biotin-requiring enzyme UP15_RS06245 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS06245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP15_RS06260 PF04198 Putative sugar-binding domain UP15_RS06270 PF13520 Amino acid permease UP15_RS06275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP15_RS06280 PF13180 PDZ domain UP15_RS06285 PF03807 NADP oxidoreductase coenzyme F420-dependent UP15_RS06285 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP15_RS06290 PF04951 D-aminopeptidase UP15_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS06300 PF12911 N-terminal TM domain of oligopeptide transport permease C UP15_RS06300 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS06305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP15_RS06305 PF00005 ABC transporter UP15_RS06310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP15_RS06315 PF17676 LD-carboxypeptidase C-terminal domain UP15_RS06315 PF02016 LD-carboxypeptidase N-terminal domain UP15_RS06320 PF13378 Enolase C-terminal domain-like UP15_RS06320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UP15_RS06325 PF00877 NlpC/P60 family UP15_RS06330 PF00005 ABC transporter UP15_RS06330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP15_RS06340 PF03061 Thioesterase superfamily UP15_RS06345 PF03551 Transcriptional regulator PadR-like family UP15_RS06360 PF13302 Acetyltransferase (GNAT) domain UP15_RS06365 PF12833 Helix-turn-helix domain UP15_RS06365 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UP15_RS06365 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UP15_RS06365 PF02805 Metal binding domain of Ada UP15_RS06370 PF00893 Small Multidrug Resistance protein UP15_RS06375 PF00893 Small Multidrug Resistance protein UP15_RS06385 PF01842 ACT domain UP15_RS06385 PF00551 Formyl transferase UP15_RS06390 PF00696 Amino acid kinase family UP15_RS06390 PF01472 PUA domain UP15_RS06395 PF00171 Aldehyde dehydrogenase family UP15_RS06400 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS06410 PF02566 OsmC-like protein UP15_RS06415 PF01047 MarR family UP15_RS06420 PF02566 OsmC-like protein UP15_RS06425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP15_RS06430 PF01717 Cobalamin-independent synthase, Catalytic domain UP15_RS06430 PF08267 Cobalamin-independent synthase, N-terminal domain UP15_RS06435 PF00082 Subtilase family UP15_RS06450 PF00072 Response regulator receiver domain UP15_RS06450 PF00486 Transcriptional regulatory protein, C terminal UP15_RS06455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS06455 PF00672 HAMP domain UP15_RS06455 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS06460 PF03413 Peptidase propeptide and YPEB domain UP15_RS06465 PF03413 Peptidase propeptide and YPEB domain UP15_RS06480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS06480 PF03466 LysR substrate binding domain UP15_RS06490 PF13411 MerR HTH family regulatory protein UP15_RS06500 PF01047 MarR family UP15_RS06505 PF03707 Bacterial signalling protein N terminal repeat UP15_RS06505 PF00990 Diguanylate cyclase, GGDEF domain UP15_RS06505 PF00563 EAL domain UP15_RS06510 PF09335 SNARE associated Golgi protein UP15_RS06515 PF03741 Integral membrane protein TerC family UP15_RS06520 PF04542 Sigma-70 region 2 UP15_RS06525 PF12791 Anti-sigma factor N-terminus UP15_RS06530 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP15_RS06535 PF08876 Domain of unknown function (DUF1836) UP15_RS06540 PF01435 Peptidase family M48 UP15_RS06545 PF02386 Cation transport protein UP15_RS06550 PF04239 Protein of unknown function (DUF421) UP15_RS06560 PF01757 Acyltransferase family UP15_RS06565 PF00989 PAS fold UP15_RS06565 PF13426 PAS domain UP15_RS06565 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS06565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS06565 PF13188 PAS domain UP15_RS06570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UP15_RS06570 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UP15_RS06575 PF01008 Initiation factor 2 subunit family UP15_RS06580 PF01636 Phosphotransferase enzyme family UP15_RS06585 PF00155 Aminotransferase class I and II UP15_RS06590 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain UP15_RS06590 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain UP15_RS06600 PF00596 Class II Aldolase and Adducin N-terminal domain UP15_RS06605 PF03079 ARD/ARD' family UP15_RS06610 PF09388 Spo0E like sporulation regulatory protein UP15_RS06615 PF02743 Cache domain UP15_RS06615 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS06620 PF01047 MarR family UP15_RS06625 PF13677 Membrane MotB of proton-channel complex MotA/MotB UP15_RS06625 PF00691 OmpA family UP15_RS06630 PF01618 MotA/TolQ/ExbB proton channel family UP15_RS06635 PF07724 AAA domain (Cdc48 subfamily) UP15_RS06635 PF00004 ATPase family associated with various cellular activities (AAA) UP15_RS06635 PF17871 AAA lid domain UP15_RS06635 PF10431 C-terminal, D2-small domain, of ClpB protein UP15_RS06645 PF06508 Queuosine biosynthesis protein QueC UP15_RS06650 PF01242 6-pyruvoyl tetrahydropterin synthase UP15_RS06655 PF04055 Radical SAM superfamily UP15_RS06660 PF14489 QueF-like protein UP15_RS06670 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) UP15_RS06680 PF07486 Cell Wall Hydrolase UP15_RS06685 PF01943 Polysaccharide biosynthesis protein UP15_RS06690 PF00578 AhpC/TSA family UP15_RS06700 PF01321 Creatinase/Prolidase N-terminal domain UP15_RS06700 PF00557 Metallopeptidase family M24 UP15_RS06705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UP15_RS06705 PF00356 Bacterial regulatory proteins, lacI family UP15_RS06710 PF00874 PRD domain UP15_RS06710 PF03123 CAT RNA binding domain UP15_RS06715 PF02378 Phosphotransferase system, EIIC UP15_RS06715 PF00367 phosphotransferase system, EIIB UP15_RS06715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP15_RS06720 PF00381 PTS HPr component phosphorylation site UP15_RS06725 PF00391 PEP-utilising enzyme, mobile domain UP15_RS06725 PF05524 PEP-utilising enzyme, N-terminal UP15_RS06725 PF02896 PEP-utilising enzyme, TIM barrel domain UP15_RS06730 PF11132 Transcriptional regulator protein (SplA) UP15_RS06740 PF00672 HAMP domain UP15_RS06740 PF02743 Cache domain UP15_RS06740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS06745 PF00106 short chain dehydrogenase UP15_RS06750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UP15_RS06750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP15_RS06755 PF00188 Cysteine-rich secretory protein family UP15_RS06760 PF00905 Penicillin binding protein transpeptidase domain UP15_RS06760 PF03717 Penicillin-binding Protein dimerisation domain UP15_RS06765 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS06765 PF00989 PAS fold UP15_RS06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS06765 PF08447 PAS fold UP15_RS06770 PF00155 Aminotransferase class I and II UP15_RS06775 PF01545 Cation efflux family UP15_RS06775 PF16916 Dimerisation domain of Zinc Transporter UP15_RS06780 PF06271 RDD family UP15_RS06790 PF01584 CheW-like domain UP15_RS06790 PF00072 Response regulator receiver domain UP15_RS06795 PF14177 YkyB-like protein UP15_RS06800 PF00589 Phage integrase family UP15_RS06800 PF14659 Phage integrase, N-terminal SAM-like domain UP15_RS06810 PF01381 Helix-turn-helix UP15_RS06825 PF09669 Phage regulatory protein Rha (Phage_pRha) UP15_RS06825 PF03374 Phage antirepressor protein KilAC domain UP15_RS06860 PF03796 DnaB-like helicase C terminal domain UP15_RS06860 PF00772 DnaB-like helicase N terminal domain UP15_RS06970 PF01464 Transglycosylase SLT domain UP15_RS07005 PF10960 BhlA holin family UP15_RS07010 PF04688 SPP1 phage holin UP15_RS07015 PF01510 N-acetylmuramoyl-L-alanine amidase UP15_RS07015 PF01471 Putative peptidoglycan binding domain UP15_RS07025 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS07040 PF07690 Major Facilitator Superfamily UP15_RS07045 PF03734 L,D-transpeptidase catalytic domain UP15_RS07045 PF01476 LysM domain UP15_RS07050 PF10518 TAT (twin-arginine translocation) pathway signal sequence UP15_RS07050 PF00149 Calcineurin-like phosphoesterase UP15_RS07060 PF10388 EAL-domain associated signalling protein domain UP15_RS07060 PF00563 EAL domain UP15_RS07065 PF05067 Manganese containing catalase UP15_RS07070 PF08796 Protein of unknown function (DUF1797) UP15_RS07075 PF04308 Ribonuclease H-like UP15_RS07080 PF14156 Antirepressor AbbA UP15_RS07090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS07090 PF03466 LysR substrate binding domain UP15_RS07100 PF00258 Flavodoxin UP15_RS07110 PF00258 Flavodoxin UP15_RS07115 PF14602 Hexapeptide repeat of succinyl-transferase UP15_RS07115 PF00132 Bacterial transferase hexapeptide (six repeats) UP15_RS07115 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal UP15_RS07120 PF07687 Peptidase dimerisation domain UP15_RS07120 PF01546 Peptidase family M20/M25/M40 UP15_RS07125 PF03698 Uncharacterised protein family (UPF0180) UP15_RS07130 PF00924 Mechanosensitive ion channel UP15_RS07135 PF10417 C-terminal domain of 1-Cys peroxiredoxin UP15_RS07135 PF00578 AhpC/TSA family UP15_RS07140 PF00578 AhpC/TSA family UP15_RS07155 PF12804 MobA-like NTP transferase domain UP15_RS07160 PF00899 ThiF family UP15_RS07165 PF00994 Probable molybdopterin binding domain UP15_RS07165 PF03454 MoeA C-terminal region (domain IV) UP15_RS07165 PF03453 MoeA N-terminal region (domain I and II) UP15_RS07170 PF03205 Molybdopterin guanine dinucleotide synthesis protein B UP15_RS07175 PF02391 MoaE protein UP15_RS07180 PF02597 ThiS family UP15_RS07195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UP15_RS07200 PF00005 ABC transporter UP15_RS07205 PF12704 MacB-like periplasmic core domain UP15_RS07205 PF02687 FtsX-like permease family UP15_RS07210 PF08220 DeoR-like helix-turn-helix domain UP15_RS07210 PF00455 DeoR C terminal sensor domain UP15_RS07215 PF00294 pfkB family carbohydrate kinase UP15_RS07220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP15_RS07220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP15_RS07225 PF10502 Signal peptidase, peptidase S26 UP15_RS07235 PF12848 ABC transporter UP15_RS07235 PF00005 ABC transporter UP15_RS07240 PF02073 Thermophilic metalloprotease (M29) UP15_RS07250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin UP15_RS07250 PF18277 AbrB C-terminal domain UP15_RS07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS07255 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS07255 PF00989 PAS fold UP15_RS07260 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like UP15_RS07265 PF02080 TrkA-C domain UP15_RS07265 PF02254 TrkA-N domain UP15_RS07270 PF13382 Adenine deaminase C-terminal domain UP15_RS07270 PF01979 Amidohydrolase family UP15_RS07275 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UP15_RS07275 PF17770 Ribonuclease J C-terminal domain UP15_RS07275 PF00753 Metallo-beta-lactamase superfamily UP15_RS07280 PF07288 Protein of unknown function (DUF1447) UP15_RS07290 PF01327 Polypeptide deformylase UP15_RS07305 PF00676 Dehydrogenase E1 component UP15_RS07310 PF02779 Transketolase, pyrimidine binding domain UP15_RS07310 PF02780 Transketolase, C-terminal domain UP15_RS07315 PF02817 e3 binding domain UP15_RS07315 PF00364 Biotin-requiring enzyme UP15_RS07315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP15_RS07320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP15_RS07320 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS07330 PF01276 Orn/Lys/Arg decarboxylase, major domain UP15_RS07330 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UP15_RS07335 PF05256 Uncharacterised protein family (UPF0223) UP15_RS07340 PF06335 Protein of unknown function (DUF1054) UP15_RS07350 PF00459 Inositol monophosphatase family UP15_RS07365 PF08281 Sigma-70, region 4 UP15_RS07365 PF04542 Sigma-70 region 2 UP15_RS07370 PF13490 Putative zinc-finger UP15_RS07385 PF00009 Elongation factor Tu GTP binding domain UP15_RS07385 PF14492 Elongation Factor G, domain II UP15_RS07385 PF03144 Elongation factor Tu domain 2 UP15_RS07385 PF00679 Elongation factor G C-terminus UP15_RS07390 PF14036 YlaH-like protein UP15_RS07395 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) UP15_RS07405 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) UP15_RS07410 PF02562 PhoH-like protein UP15_RS07410 PF13638 PIN domain UP15_RS07420 PF04960 Glutaminase UP15_RS07425 PF07408 Protein of unknown function (DUF1507) UP15_RS07430 PF01098 Cell cycle protein UP15_RS07435 PF00682 HMGL-like UP15_RS07435 PF00364 Biotin-requiring enzyme UP15_RS07435 PF00289 Biotin carboxylase, N-terminal domain UP15_RS07435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP15_RS07435 PF02436 Conserved carboxylase domain UP15_RS07435 PF02785 Biotin carboxylase C-terminal domain UP15_RS07440 PF00875 DNA photolyase UP15_RS07440 PF03441 FAD binding domain of DNA photolyase UP15_RS07445 PF02628 Cytochrome oxidase assembly protein UP15_RS07450 PF01040 UbiA prenyltransferase family UP15_RS07455 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UP15_RS07455 PF02790 Cytochrome C oxidase subunit II, transmembrane domain UP15_RS07455 PF00034 Cytochrome c UP15_RS07460 PF00115 Cytochrome C and Quinol oxidase polypeptide I UP15_RS07465 PF00510 Cytochrome c oxidase subunit III UP15_RS07470 PF03626 Prokaryotic Cytochrome C oxidase subunit IV UP15_RS07475 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) UP15_RS07480 PF08868 YugN-like family UP15_RS07485 PF00571 CBS domain UP15_RS07490 PF00188 Cysteine-rich secretory protein family UP15_RS07490 PF14504 CAP-associated N-terminal UP15_RS07495 PF14071 Putative coat protein UP15_RS07500 PF14003 YlbE-like protein UP15_RS07510 PF06133 Control of competence regulator ComK, YlbF/YmcA UP15_RS07515 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) UP15_RS07525 PF01467 Cytidylyltransferase-like UP15_RS07530 PF07670 Nucleoside recognition UP15_RS07535 PF01734 Patatin-like phospholipase UP15_RS07540 PF13180 PDZ domain UP15_RS07540 PF05362 Lon protease (S16) C-terminal proteolytic domain UP15_RS07545 PF05636 HIGH Nucleotidyl Transferase UP15_RS07550 PF02620 Large ribosomal RNA subunit accumulation protein YceD UP15_RS07555 PF01783 Ribosomal L32p protein family UP15_RS07565 PF00583 Acetyltransferase (GNAT) family UP15_RS07570 PF02558 Ketopantoate reductase PanE/ApbA UP15_RS07570 PF08546 Ketopantoate reductase PanE/ApbA C terminal UP15_RS07575 PF10079 Bacillithiol biosynthesis BshC UP15_RS07580 PF02381 MraZ protein, putative antitoxin-like UP15_RS07585 PF01795 MraW methylase family UP15_RS07595 PF03717 Penicillin-binding Protein dimerisation domain UP15_RS07595 PF03793 PASTA domain UP15_RS07595 PF00905 Penicillin binding protein transpeptidase domain UP15_RS07600 PF00905 Penicillin binding protein transpeptidase domain UP15_RS07600 PF03717 Penicillin-binding Protein dimerisation domain UP15_RS07600 PF03793 PASTA domain UP15_RS07605 PF08245 Mur ligase middle domain UP15_RS07605 PF02875 Mur ligase family, glutamate ligase domain UP15_RS07605 PF01225 Mur ligase family, catalytic domain UP15_RS07610 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 UP15_RS07610 PF00953 Glycosyl transferase family 4 UP15_RS07615 PF08245 Mur ligase middle domain UP15_RS07615 PF02875 Mur ligase family, glutamate ligase domain UP15_RS07620 PF01098 Cell cycle protein UP15_RS07625 PF03033 Glycosyltransferase family 28 N-terminal domain UP15_RS07625 PF04101 Glycosyltransferase family 28 C-terminal domain UP15_RS07630 PF01565 FAD binding domain UP15_RS07630 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain UP15_RS07635 PF08478 POTRA domain, FtsQ-type UP15_RS07640 PF05949 Bacterial protein of unknown function (DUF881) UP15_RS07645 PF05949 Bacterial protein of unknown function (DUF881) UP15_RS07650 PF06947 Protein of unknown function (DUF1290) UP15_RS07655 PF02491 SHS2 domain inserted in FTSA UP15_RS07660 PF00091 Tubulin/FtsZ family, GTPase domain UP15_RS07660 PF12327 FtsZ family, C-terminal domain UP15_RS07665 PF00082 Subtilase family UP15_RS07665 PF05922 Peptidase inhibitor I9 UP15_RS07670 PF03419 Sporulation factor SpoIIGA UP15_RS07675 PF04545 Sigma-70, region 4 UP15_RS07675 PF04542 Sigma-70 region 2 UP15_RS07680 PF04545 Sigma-70, region 4 UP15_RS07680 PF04542 Sigma-70 region 2 UP15_RS07680 PF04539 Sigma-70 region 3 UP15_RS07685 PF04198 Putative sugar-binding domain UP15_RS07700 PF03608 PTS system enzyme II sorbitol-specific factor UP15_RS07705 PF07663 Sorbitol phosphotransferase enzyme II C-terminus UP15_RS07705 PF03612 Sorbitol phosphotransferase enzyme II N-terminus UP15_RS07710 PF03829 PTS system glucitol/sorbitol-specific IIA component UP15_RS07715 PF00005 ABC transporter UP15_RS07720 PF05239 PRC-barrel domain UP15_RS07725 PF02578 Multi-copper polyphenol oxidoreductase laccase UP15_RS07730 PF01168 Alanine racemase, N-terminal domain UP15_RS07735 PF04472 Cell division protein SepF UP15_RS07740 PF02325 YGGT family UP15_RS07745 PF17774 Putative RNA-binding domain in YlmH UP15_RS07745 PF01479 S4 domain UP15_RS07750 PF05103 DivIVA protein UP15_RS07755 PF00133 tRNA synthetases class I (I, L, M and V) UP15_RS07755 PF08264 Anticodon-binding domain of tRNA UP15_RS07760 PF01258 Prokaryotic dksA/traR C4-type zinc finger UP15_RS07765 PF01252 Signal peptidase (SPase) II UP15_RS07770 PF00849 RNA pseudouridylate synthase UP15_RS07770 PF01479 S4 domain UP15_RS07775 PF00156 Phosphoribosyl transferase domain UP15_RS07780 PF00860 Permease family UP15_RS07785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UP15_RS07785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UP15_RS07790 PF01979 Amidohydrolase family UP15_RS07795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UP15_RS07795 PF00117 Glutamine amidotransferase class-I UP15_RS07800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP15_RS07800 PF02142 MGS-like domain UP15_RS07800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UP15_RS07805 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B UP15_RS07810 PF01180 Dihydroorotate dehydrogenase UP15_RS07815 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UP15_RS07820 PF00156 Phosphoribosyl transferase domain UP15_RS07825 PF01507 Phosphoadenosine phosphosulfate reductase family UP15_RS07830 PF01384 Phosphate transporter family UP15_RS07835 PF01747 ATP-sulfurylase UP15_RS07835 PF14306 PUA-like domain UP15_RS07845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP15_RS07850 PF01903 CbiX UP15_RS07860 PF05670 NFACT protein RNA binding domain UP15_RS07865 PF00690 Cation transporter/ATPase, N-terminus UP15_RS07865 PF00689 Cation transporting ATPase, C-terminus UP15_RS07870 PF08340 Domain of unknown function (DUF1732) UP15_RS07870 PF03755 YicC-like family, N-terminal region UP15_RS07875 PF04025 Domain of unknown function (DUF370) UP15_RS07880 PF00625 Guanylate kinase UP15_RS07885 PF01192 RNA polymerase Rpb6 UP15_RS07890 PF04127 DNA / pantothenate metabolism flavoprotein UP15_RS07890 PF02441 Flavoprotein UP15_RS07895 PF18319 PriA DNA helicase Cys-rich region (CRR) domain UP15_RS07895 PF04851 Type III restriction enzyme, res subunit UP15_RS07895 PF18074 Primosomal protein N C-terminal domain UP15_RS07895 PF17764 3′ DNA-binding domain (3′BD) UP15_RS07895 PF00271 Helicase conserved C-terminal domain UP15_RS07900 PF01327 Polypeptide deformylase UP15_RS07905 PF00551 Formyl transferase UP15_RS07905 PF02911 Formyl transferase, C-terminal domain UP15_RS07910 PF01029 NusB family UP15_RS07910 PF01189 16S rRNA methyltransferase RsmB/F UP15_RS07915 PF04055 Radical SAM superfamily UP15_RS07925 PF03793 PASTA domain UP15_RS07925 PF00069 Protein kinase domain UP15_RS07930 PF16745 RsgA N-terminal domain UP15_RS07930 PF03193 RsgA GTPase UP15_RS07935 PF00834 Ribulose-phosphate 3 epimerase family UP15_RS07940 PF04263 Thiamin pyrophosphokinase, catalytic domain UP15_RS07940 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain UP15_RS07945 PF08183 Stage V sporulation protein family UP15_RS07950 PF00830 Ribosomal L28 family UP15_RS07955 PF03780 Asp23 family, cell envelope-related function UP15_RS07960 PF02734 DAK2 domain UP15_RS07960 PF13684 Dihydroxyacetone kinase family UP15_RS07965 PF03315 Serine dehydratase beta chain UP15_RS07965 PF01842 ACT domain UP15_RS07970 PF03313 Serine dehydratase alpha chain UP15_RS07975 PF00270 DEAD/DEAH box helicase UP15_RS07975 PF00271 Helicase conserved C-terminal domain UP15_RS07975 PF17191 RecG wedge domain UP15_RS07985 PF02504 Fatty acid synthesis protein UP15_RS07990 PF00698 Acyl transferase domain UP15_RS08000 PF00550 Phosphopantetheine attachment site UP15_RS08005 PF14622 Ribonuclease-III-like UP15_RS08005 PF00035 Double-stranded RNA binding motif UP15_RS08010 PF02463 RecF/RecN/SMC N terminal domain UP15_RS08010 PF06470 SMC proteins Flexible Hinge Domain UP15_RS08015 PF02881 SRP54-type protein, helical bundle domain UP15_RS08015 PF00448 SRP54-type protein, GTPase domain UP15_RS08020 PF04297 Putative helix-turn-helix protein, YlxM / p13 like UP15_RS08025 PF02881 SRP54-type protein, helical bundle domain UP15_RS08025 PF02978 Signal peptide binding domain UP15_RS08025 PF00448 SRP54-type protein, GTPase domain UP15_RS08030 PF00886 Ribosomal protein S16 UP15_RS08040 PF11068 YlqD protein UP15_RS08045 PF01782 RimM N-terminal domain UP15_RS08045 PF05239 PRC-barrel domain UP15_RS08050 PF01746 tRNA (Guanine-1)-methyltransferase UP15_RS08055 PF01245 Ribosomal protein L19 UP15_RS08060 PF01926 50S ribosome-binding GTPase UP15_RS08065 PF01351 Ribonuclease HII UP15_RS08075 PF01312 FlhB HrpN YscU SpaS Family UP15_RS08080 PF00549 CoA-ligase UP15_RS08080 PF08442 ATP-grasp domain UP15_RS08085 PF02629 CoA binding domain UP15_RS08085 PF00549 CoA-ligase UP15_RS08090 PF02481 DNA recombination-mediator protein A UP15_RS08095 PF01751 Toprim domain UP15_RS08095 PF01396 Topoisomerase DNA binding C4 zinc finger UP15_RS08095 PF01131 DNA topoisomerase UP15_RS08100 PF01134 Glucose inhibited division protein A UP15_RS08105 PF00589 Phage integrase family UP15_RS08105 PF02899 Phage integrase, N-terminal SAM-like domain UP15_RS08110 PF00227 Proteasome subunit UP15_RS08115 PF07724 AAA domain (Cdc48 subfamily) UP15_RS08115 PF00004 ATPase family associated with various cellular activities (AAA) UP15_RS08115 PF10431 C-terminal, D2-small domain, of ClpB protein UP15_RS08120 PF06018 CodY GAF-like domain UP15_RS08120 PF08222 CodY helix-turn-helix domain UP15_RS08125 PF00460 Flagella basal body rod protein UP15_RS08130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP15_RS08130 PF00460 Flagella basal body rod protein UP15_RS08135 PF02049 Flagellar hook-basal body complex protein FliE UP15_RS08140 PF01514 Secretory protein of YscJ/FliF family UP15_RS08140 PF08345 Flagellar M-ring protein C-terminal UP15_RS08145 PF14841 FliG middle domain UP15_RS08145 PF01706 FliG C-terminal domain UP15_RS08145 PF14842 FliG N-terminal domain UP15_RS08150 PF02108 Flagellar assembly protein FliH UP15_RS08155 PF18269 T3SS EscN ATPase C-terminal domain UP15_RS08155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP15_RS08155 PF02874 ATP synthase alpha/beta family, beta-barrel domain UP15_RS08160 PF02050 Flagellar FliJ protein UP15_RS08165 PF03448 MgtE intracellular N domain UP15_RS08170 PF02120 Flagellar hook-length control protein FliK UP15_RS08175 PF03963 Flagellar hook capping protein - N-terminal region UP15_RS08180 PF00460 Flagella basal body rod protein UP15_RS08180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP15_RS08185 PF06289 Flagellar and Swarming motility proteins UP15_RS08190 PF03748 Flagellar basal body-associated protein FliL UP15_RS08195 PF02154 Flagellar motor switch protein FliM UP15_RS08195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UP15_RS08200 PF04509 CheC-like family UP15_RS08200 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UP15_RS08205 PF00072 Response regulator receiver domain UP15_RS08210 PF04347 Flagellar biosynthesis protein, FliO UP15_RS08215 PF00813 FliP family UP15_RS08220 PF01313 Bacterial export proteins, family 3 UP15_RS08225 PF01311 Bacterial export proteins, family 1 UP15_RS08230 PF01312 FlhB HrpN YscU SpaS Family UP15_RS08235 PF00771 FHIPEP family UP15_RS08240 PF00448 SRP54-type protein, GTPase domain UP15_RS08245 PF10609 NUBPL iron-transfer P-loop NTPase UP15_RS08250 PF01339 CheB methylesterase UP15_RS08250 PF00072 Response regulator receiver domain UP15_RS08255 PF02895 Signal transducing histidine kinase, homodimeric domain UP15_RS08255 PF01584 CheW-like domain UP15_RS08255 PF01627 Hpt domain UP15_RS08255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS08255 PF07194 P2 response regulator binding domain UP15_RS08260 PF01584 CheW-like domain UP15_RS08265 PF04509 CheC-like family UP15_RS08270 PF03975 CheD chemotactic sensory transduction UP15_RS08275 PF04542 Sigma-70 region 2 UP15_RS08275 PF04539 Sigma-70 region 3 UP15_RS08275 PF04545 Sigma-70, region 4 UP15_RS08285 PF00318 Ribosomal protein S2 UP15_RS08290 PF00889 Elongation factor TS UP15_RS08295 PF00696 Amino acid kinase family UP15_RS08300 PF01765 Ribosome recycling factor UP15_RS08305 PF01255 Putative undecaprenyl diphosphate synthase UP15_RS08315 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase UP15_RS08315 PF13288 DXP reductoisomerase C-terminal domain UP15_RS08315 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain UP15_RS08320 PF17820 PDZ domain UP15_RS08320 PF02163 Peptidase family M50 UP15_RS08325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP15_RS08325 PF03129 Anticodon binding domain UP15_RS08325 PF04073 Aminoacyl-tRNA editing domain UP15_RS08330 PF11490 DNA polymerase III polC-type N-terminus II UP15_RS08330 PF14480 DNA polymerase III polC-type N-terminus I UP15_RS08330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UP15_RS08330 PF07733 Bacterial DNA polymerase III alpha NTPase domain UP15_RS08330 PF14579 Helix-hairpin-helix motif UP15_RS08330 PF02811 PHP domain UP15_RS08330 PF00929 Exonuclease UP15_RS08335 PF00759 Glycosyl hydrolase family 9 UP15_RS08335 PF00942 Cellulose binding domain UP15_RS08340 PF00759 Glycosyl hydrolase family 9 UP15_RS08340 PF00942 Cellulose binding domain UP15_RS08340 PF02011 Glycosyl hydrolase family 48 UP15_RS08345 PF12791 Anti-sigma factor N-terminus UP15_RS08345 PF00331 Glycosyl hydrolase family 10 UP15_RS08355 PF02576 RimP N-terminal domain UP15_RS08355 PF17384 RimP C-terminal SH3 domain UP15_RS08360 PF00575 S1 RNA binding domain UP15_RS08360 PF08529 NusA N-terminal domain UP15_RS08360 PF13184 NusA-like KH domain UP15_RS08365 PF04296 Protein of unknown function (DUF448) UP15_RS08370 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family UP15_RS08375 PF11987 Translation-initiation factor 2 UP15_RS08375 PF04760 Translation initiation factor IF-2, N-terminal region UP15_RS08375 PF00009 Elongation factor Tu GTP binding domain UP15_RS08380 PF04456 Protein of unknown function (DUF503) UP15_RS08385 PF02033 Ribosome-binding factor A UP15_RS08390 PF16198 tRNA pseudouridylate synthase B C-terminal domain UP15_RS08390 PF01509 TruB family pseudouridylate synthase (N terminal domain) UP15_RS08395 PF06574 FAD synthetase UP15_RS08395 PF01687 Riboflavin kinase UP15_RS08400 PF00312 Ribosomal protein S15 UP15_RS08405 PF03725 3' exoribonuclease family, domain 2 UP15_RS08405 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain UP15_RS08405 PF01138 3' exoribonuclease family, domain 1 UP15_RS08405 PF00575 S1 RNA binding domain UP15_RS08405 PF00013 KH domain UP15_RS08410 PF01522 Polysaccharide deacetylase UP15_RS08415 PF00675 Insulinase (Peptidase family M16) UP15_RS08415 PF05193 Peptidase M16 inactive domain UP15_RS08425 PF05239 PRC-barrel domain UP15_RS08430 PF16924 Dipicolinate synthase subunit A N-terminal domain UP15_RS08430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain UP15_RS08435 PF02441 Flavoprotein UP15_RS08440 PF02774 Semialdehyde dehydrogenase, dimerisation domain UP15_RS08440 PF01118 Semialdehyde dehydrogenase, NAD binding domain UP15_RS08445 PF13840 ACT domain UP15_RS08445 PF00696 Amino acid kinase family UP15_RS08450 PF00701 Dihydrodipicolinate synthetase family UP15_RS08455 PF00753 Metallo-beta-lactamase superfamily UP15_RS08455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UP15_RS08455 PF17770 Ribonuclease J C-terminal domain UP15_RS08460 PF00574 Clp protease UP15_RS08465 PF14035 YlzJ-like protein UP15_RS08470 PF01580 FtsK/SpoIIIE family UP15_RS08470 PF09397 Ftsk gamma domain UP15_RS08470 PF17854 FtsK alpha domain UP15_RS08475 PF00392 Bacterial regulatory proteins, gntR family UP15_RS08475 PF07702 UTRA domain UP15_RS08480 PF07690 Major Facilitator Superfamily UP15_RS08485 PF03176 MMPL family UP15_RS08490 PF05193 Peptidase M16 inactive domain UP15_RS08495 PF05193 Peptidase M16 inactive domain UP15_RS08495 PF00675 Insulinase (Peptidase family M16) UP15_RS08505 PF03176 MMPL family UP15_RS08515 PF11588 Protein of unknown function (DUF3243) UP15_RS08520 PF11868 Protein of unknown function (DUF3388) UP15_RS08525 PF13464 Domain of unknown function (DUF4115) UP15_RS08530 PF01066 CDP-alcohol phosphatidyltransferase UP15_RS08535 PF18146 Damage-inducible protein CinA KH domain UP15_RS08535 PF00994 Probable molybdopterin binding domain UP15_RS08535 PF02464 Competence-damaged protein UP15_RS08540 PF00154 recA bacterial DNA recombination protein UP15_RS08545 PF00013 KH domain UP15_RS08545 PF01966 HD domain UP15_RS08545 PF12072 Domain of unknown function (DUF3552) UP15_RS08550 PF13277 YmdB-like protein UP15_RS08555 PF04232 Stage V sporulation protein S (SpoVS) UP15_RS08560 PF00873 AcrB/AcrD/AcrF family UP15_RS08565 PF00107 Zinc-binding dehydrogenase UP15_RS08565 PF08240 Alcohol dehydrogenase GroES-like domain UP15_RS08570 PF00155 Aminotransferase class I and II UP15_RS08580 PF04055 Radical SAM superfamily UP15_RS08580 PF00919 Uncharacterized protein family UPF0004 UP15_RS08580 PF01938 TRAM domain UP15_RS08585 PF06133 Control of competence regulator ComK, YlbF/YmcA UP15_RS08590 PF10628 Outer spore coat protein E (CotE) UP15_RS08595 PF01624 MutS domain I UP15_RS08595 PF00488 MutS domain V UP15_RS08595 PF05188 MutS domain II UP15_RS08595 PF05192 MutS domain III UP15_RS08595 PF05190 MutS family domain IV UP15_RS08600 PF08676 MutL C terminal dimerisation domain UP15_RS08600 PF01119 DNA mismatch repair protein, C-terminal domain UP15_RS08610 PF17735 Biofilm surface layer A UP15_RS08625 PF02559 CarD-like/TRCF domain UP15_RS08635 PF05908 Poly-gamma-glutamate hydrolase UP15_RS08640 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS08645 PF00082 Subtilase family UP15_RS08650 PF05908 Poly-gamma-glutamate hydrolase UP15_RS08655 PF02566 OsmC-like protein UP15_RS08660 PF00893 Small Multidrug Resistance protein UP15_RS08665 PF00893 Small Multidrug Resistance protein UP15_RS08680 PF12788 YmaF family UP15_RS08690 PF17209 Hfq protein UP15_RS08705 PF07972 NrdI Flavodoxin like UP15_RS08710 PF00317 Ribonucleotide reductase, all-alpha domain UP15_RS08710 PF02867 Ribonucleotide reductase, barrel domain UP15_RS08710 PF08343 Ribonucleotide reductase N-terminal UP15_RS08715 PF00268 Ribonucleotide reductase, small chain UP15_RS08725 PF05036 Sporulation related domain UP15_RS08725 PF01520 N-acetylmuramoyl-L-alanine amidase UP15_RS08730 PF00004 ATPase family associated with various cellular activities (AAA) UP15_RS08730 PF17866 AAA lid domain UP15_RS08735 PF16360 GTP-binding GTPase Middle Region UP15_RS08735 PF13167 GTP-binding GTPase N-terminal UP15_RS08735 PF01926 50S ribosome-binding GTPase UP15_RS08740 PF06838 Methionine gamma-lyase UP15_RS08745 PF13411 MerR HTH family regulatory protein UP15_RS08750 PF00120 Glutamine synthetase, catalytic domain UP15_RS08750 PF03951 Glutamine synthetase, beta-Grasp domain UP15_RS08770 PF17874 MalT-like TPR region UP15_RS08770 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS08775 PF04740 LXG domain of WXG superfamily UP15_RS08780 PF04634 Protein of unknown function, DUF600 UP15_RS08790 PF08818 Domain of unknown function (DU1801) UP15_RS08810 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS08820 PF06912 Protein of unknown function (DUF1275) UP15_RS08825 PF01068 ATP dependent DNA ligase domain UP15_RS08830 PF02735 Ku70/Ku80 beta-barrel domain UP15_RS08835 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) UP15_RS08845 PF02082 Transcriptional regulator UP15_RS08850 PF05368 NmrA-like family UP15_RS08860 PF02754 Cysteine-rich domain UP15_RS08865 PF02589 LUD domain UP15_RS08865 PF13183 4Fe-4S dicluster domain UP15_RS08865 PF11870 Domain of unknown function (DUF3390) UP15_RS08870 PF02589 LUD domain UP15_RS08890 PF04239 Protein of unknown function (DUF421) UP15_RS08895 PF00440 Bacterial regulatory proteins, tetR family UP15_RS08895 PF16295 Tetracyclin repressor-like, C-terminal domain UP15_RS08900 PF00175 Oxidoreductase NAD-binding domain UP15_RS08900 PF00258 Flavodoxin UP15_RS08900 PF00667 FAD binding domain UP15_RS08900 PF00067 Cytochrome P450 UP15_RS08905 PF00089 Trypsin UP15_RS08910 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase UP15_RS08915 PF14040 Deoxyribonuclease NucA/NucB UP15_RS08920 PF01740 STAS domain UP15_RS08925 PF16800 IseA DL-endopeptidase inhibitor UP15_RS08935 PF01726 LexA DNA binding domain UP15_RS08935 PF00717 Peptidase S24-like UP15_RS08940 PF01476 LysM domain UP15_RS08945 PF00239 Resolvase, N terminal domain UP15_RS08950 PF05979 Bacterial protein of unknown function (DUF896) UP15_RS08955 PF02779 Transketolase, pyrimidine binding domain UP15_RS08955 PF02780 Transketolase, C-terminal domain UP15_RS08955 PF00456 Transketolase, thiamine diphosphate binding domain UP15_RS08960 PF10747 Sporulation inhibitor of replication protein SirA UP15_RS08965 PF03672 Uncharacterised protein family (UPF0154) UP15_RS08970 PF09388 Spo0E like sporulation regulatory protein UP15_RS08975 PF02683 Cytochrome C biogenesis protein transmembrane region UP15_RS08980 PF07301 Protein of unknown function (DUF1453) UP15_RS08985 PF11084 Protein of unknown function (DUF2621) UP15_RS08995 PF08179 Small acid-soluble spore protein P family UP15_RS09005 PF00330 Aconitase family (aconitate hydratase) UP15_RS09005 PF00694 Aconitase C-terminal domain UP15_RS09010 PF00578 AhpC/TSA family UP15_RS09015 PF08177 Small acid-soluble spore protein N family UP15_RS09025 PF03061 Thioesterase superfamily UP15_RS09035 PF01521 Iron-sulphur cluster biosynthesis UP15_RS09040 PF02660 Glycerol-3-phosphate acyltransferase UP15_RS09045 PF13380 CoA binding domain UP15_RS09050 PF01751 Toprim domain UP15_RS09050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS09050 PF00986 DNA gyrase B subunit, carboxyl terminus UP15_RS09050 PF00204 DNA gyrase B UP15_RS09055 PF03989 DNA gyrase C-terminal domain, beta-propeller UP15_RS09055 PF00521 DNA gyrase/topoisomerase IV, subunit A UP15_RS09065 PF07690 Major Facilitator Superfamily UP15_RS09070 PF00180 Isocitrate/isopropylmalate dehydrogenase UP15_RS09075 PF14602 Hexapeptide repeat of succinyl-transferase UP15_RS09075 PF12464 Maltose acetyltransferase UP15_RS09080 PF01451 Low molecular weight phosphotyrosine protein phosphatase UP15_RS09085 PF02040 Arsenical pump membrane protein UP15_RS09090 PF01022 Bacterial regulatory protein, arsR family UP15_RS09105 PF01323 DSBA-like thioredoxin domain UP15_RS09110 PF02525 Flavodoxin-like fold UP15_RS09120 PF00440 Bacterial regulatory proteins, tetR family UP15_RS09125 PF02525 Flavodoxin-like fold UP15_RS09130 PF01638 HxlR-like helix-turn-helix UP15_RS09135 PF00291 Pyridoxal-phosphate dependent enzyme UP15_RS09140 PF01042 Endoribonuclease L-PSP UP15_RS09150 PF00440 Bacterial regulatory proteins, tetR family UP15_RS09155 PF01494 FAD binding domain UP15_RS09170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP15_RS09175 PF07859 alpha/beta hydrolase fold UP15_RS09175 PF00934 PE family UP15_RS09180 PF13411 MerR HTH family regulatory protein UP15_RS09190 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS09195 PF00072 Response regulator receiver domain UP15_RS09195 PF00486 Transcriptional regulatory protein, C terminal UP15_RS09200 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain UP15_RS09200 PF17189 Glycosyl hydrolase family 30 beta sandwich domain UP15_RS09205 PF03422 Carbohydrate binding module (family 6) UP15_RS09205 PF04616 Glycosyl hydrolases family 43 UP15_RS09210 PF00171 Aldehyde dehydrogenase family UP15_RS09215 PF11975 Family 4 glycosyl hydrolase C-terminal domain UP15_RS09215 PF02056 Family 4 glycosyl hydrolase UP15_RS09220 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS09225 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS09230 PF01547 Bacterial extracellular solute-binding protein UP15_RS09235 PF00356 Bacterial regulatory proteins, lacI family UP15_RS09240 PF00834 Ribulose-phosphate 3 epimerase family UP15_RS09255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP15_RS09260 PF14550 Putative phage serine protease XkdF UP15_RS09260 PF14550 Putative phage serine protease XkdF UP15_RS09270 PF04233 Phage Mu protein F like protein UP15_RS09275 PF04860 Phage portal protein UP15_RS09285 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues UP15_RS09285 PF04740 LXG domain of WXG superfamily UP15_RS09285 PF14449 Pre-toxin TG UP15_RS09290 PF01047 MarR family UP15_RS09295 PF07690 Major Facilitator Superfamily UP15_RS09300 PF01116 Fructose-bisphosphate aldolase class-II UP15_RS09305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP15_RS09305 PF02378 Phosphotransferase system, EIIC UP15_RS09305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP15_RS09310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP15_RS09310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP15_RS09315 PF00294 pfkB family carbohydrate kinase UP15_RS09320 PF01380 SIS domain UP15_RS09320 PF01418 Helix-turn-helix domain, rpiR family UP15_RS09325 PF13091 PLD-like domain UP15_RS09345 PF00171 Aldehyde dehydrogenase family UP15_RS09350 PF00089 Trypsin UP15_RS09360 PF00667 FAD binding domain UP15_RS09360 PF00258 Flavodoxin UP15_RS09360 PF00175 Oxidoreductase NAD-binding domain UP15_RS09365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UP15_RS09365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UP15_RS09370 PF13193 AMP-binding enzyme C-terminal domain UP15_RS09370 PF16177 Acetyl-coenzyme A synthetase N-terminus UP15_RS09370 PF00501 AMP-binding enzyme UP15_RS09375 PF01039 Carboxyl transferase domain UP15_RS09380 PF00378 Enoyl-CoA hydratase/isomerase UP15_RS09385 PF00682 HMGL-like UP15_RS09390 PF00364 Biotin-requiring enzyme UP15_RS09395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP15_RS09395 PF00289 Biotin carboxylase, N-terminal domain UP15_RS09395 PF02785 Biotin carboxylase C-terminal domain UP15_RS09400 PF13193 AMP-binding enzyme C-terminal domain UP15_RS09400 PF00501 AMP-binding enzyme UP15_RS09405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP15_RS09405 PF02770 Acyl-CoA dehydrogenase, middle domain UP15_RS09405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP15_RS09410 PF02638 Glycosyl hydrolase-like 10 UP15_RS09415 PF13350 Tyrosine phosphatase family UP15_RS09420 PF08220 DeoR-like helix-turn-helix domain UP15_RS09420 PF00455 DeoR C terminal sensor domain UP15_RS09425 PF14552 Tautomerase enzyme UP15_RS09435 PF17853 GGDEF-like domain UP15_RS09435 PF13556 PucR C-terminal helix-turn-helix domain UP15_RS09435 PF05651 Putative sugar diacid recognition UP15_RS09440 PF01565 FAD binding domain UP15_RS09440 PF02913 FAD linked oxidases, C-terminal domain UP15_RS09445 PF02754 Cysteine-rich domain UP15_RS09445 PF13183 4Fe-4S dicluster domain UP15_RS09450 PF03323 Bacillus/Clostridium GerA spore germination protein UP15_RS09455 PF03845 Spore germination protein UP15_RS09465 PF12728 Helix-turn-helix domain UP15_RS09470 PF04138 GtrA-like protein UP15_RS09475 PF00483 Nucleotidyl transferase UP15_RS09480 PF09335 SNARE associated Golgi protein UP15_RS09485 PF02602 Uroporphyrinogen-III synthase HemD UP15_RS09500 PF00296 Luciferase-like monooxygenase UP15_RS09505 PF01554 MatE UP15_RS09510 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family UP15_RS09515 PF01095 Pectinesterase UP15_RS09520 PF04239 Protein of unknown function (DUF421) UP15_RS09525 PF00355 Rieske [2Fe-2S] domain UP15_RS09530 PF04324 BFD-like [2Fe-2S] binding domain UP15_RS09530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UP15_RS09530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UP15_RS09530 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS09530 PF18267 Rubredoxin NAD+ reductase C-terminal domain UP15_RS09535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UP15_RS09535 PF00384 Molybdopterin oxidoreductase UP15_RS09535 PF01568 Molydopterin dinucleotide binding domain UP15_RS09540 PF18267 Rubredoxin NAD+ reductase C-terminal domain UP15_RS09540 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS09540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UP15_RS09540 PF04324 BFD-like [2Fe-2S] binding domain UP15_RS09545 PF07690 Major Facilitator Superfamily UP15_RS09550 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS09550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UP15_RS09555 PF04898 Glutamate synthase central domain UP15_RS09555 PF00310 Glutamine amidotransferases class-II UP15_RS09555 PF01645 Conserved region in glutamate synthase UP15_RS09555 PF01493 GXGXG motif UP15_RS09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS09560 PF03466 LysR substrate binding domain UP15_RS09565 PF00664 ABC transporter transmembrane region UP15_RS09565 PF00005 ABC transporter UP15_RS09570 PF00005 ABC transporter UP15_RS09570 PF00664 ABC transporter transmembrane region UP15_RS09575 PF06445 GyrI-like small molecule binding domain UP15_RS09575 PF13411 MerR HTH family regulatory protein UP15_RS09580 PF00583 Acetyltransferase (GNAT) family UP15_RS09585 PF00171 Aldehyde dehydrogenase family UP15_RS09590 PF01472 PUA domain UP15_RS09590 PF00696 Amino acid kinase family UP15_RS09595 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP15_RS09595 PF03807 NADP oxidoreductase coenzyme F420-dependent UP15_RS09600 PF00067 Cytochrome P450 UP15_RS09605 PF01568 Molydopterin dinucleotide binding domain UP15_RS09605 PF00384 Molybdopterin oxidoreductase UP15_RS09605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UP15_RS09610 PF00457 Glycosyl hydrolases family 11 UP15_RS09615 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UP15_RS09615 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UP15_RS09620 PF01261 Xylose isomerase-like TIM barrel UP15_RS09625 PF00480 ROK family UP15_RS09630 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain UP15_RS09630 PF04616 Glycosyl hydrolases family 43 UP15_RS09640 PF01588 Putative tRNA binding domain UP15_RS09650 PF14158 YndJ-like protein UP15_RS09655 PF13761 Domain of unknown function (DUF4166) UP15_RS09665 PF00440 Bacterial regulatory proteins, tetR family UP15_RS09665 PF13305 Tetracyclin repressor-like, C-terminal domain UP15_RS09670 PF00753 Metallo-beta-lactamase superfamily UP15_RS09675 PF06445 GyrI-like small molecule binding domain UP15_RS09680 PF08279 HTH domain UP15_RS09680 PF13280 WYL domain UP15_RS09690 PF01022 Bacterial regulatory protein, arsR family UP15_RS09695 PF00324 Amino acid permease UP15_RS09710 PF03972 MmgE/PrpD family UP15_RS09715 PF00285 Citrate synthase, C-terminal domain UP15_RS09720 PF04238 Protein of unknown function (DUF420) UP15_RS09730 PF01476 LysM domain UP15_RS09730 PF06725 3D domain UP15_RS09735 PF09382 RQC domain UP15_RS09735 PF16124 RecQ zinc-binding UP15_RS09735 PF00570 HRDC domain UP15_RS09735 PF00271 Helicase conserved C-terminal domain UP15_RS09735 PF00270 DEAD/DEAH box helicase UP15_RS09745 PF01258 Prokaryotic dksA/traR C4-type zinc finger UP15_RS09755 PF08000 Bacterial PH domain UP15_RS09765 PF00171 Aldehyde dehydrogenase family UP15_RS09775 PF13243 Squalene-hopene cyclase C-terminal domain UP15_RS09775 PF13249 Squalene-hopene cyclase N-terminal domain UP15_RS09780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UP15_RS09780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UP15_RS09785 PF01758 Sodium Bile acid symporter family UP15_RS09790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP15_RS09790 PF00364 Biotin-requiring enzyme UP15_RS09790 PF02817 e3 binding domain UP15_RS09795 PF16870 2-oxoglutarate dehydrogenase C-terminal UP15_RS09795 PF00676 Dehydrogenase E1 component UP15_RS09795 PF02779 Transketolase, pyrimidine binding domain UP15_RS09795 PF16078 2-oxoglutarate dehydrogenase N-terminus UP15_RS09800 PF00092 von Willebrand factor type A domain UP15_RS09805 PF07728 AAA domain (dynein-related subfamily) UP15_RS09810 PF13627 Prokaryotic lipoprotein-attachment site UP15_RS09810 PF00080 Copper/zinc superoxide dismutase (SODC) UP15_RS09815 PF00877 NlpC/P60 family UP15_RS09815 PF01476 LysM domain UP15_RS09820 PF10372 Bacterial membrane-spanning protein N-terminus UP15_RS09820 PF02457 DisA bacterial checkpoint controller nucleotide-binding UP15_RS09825 PF01554 MatE UP15_RS09830 PF02585 GlcNAc-PI de-N-acetylase UP15_RS09835 PF08830 Protein of unknown function (DUF1806) UP15_RS09845 PF00892 EamA-like transporter family UP15_RS09860 PF01638 HxlR-like helix-turn-helix UP15_RS09865 PF00881 Nitroreductase family UP15_RS09870 PF11755 Protein of unknown function (DUF3311) UP15_RS09875 PF00474 Sodium:solute symporter family UP15_RS09880 PF01471 Putative peptidoglycan binding domain UP15_RS09880 PF17820 PDZ domain UP15_RS09880 PF03572 Peptidase family S41 UP15_RS09885 PF08241 Methyltransferase domain UP15_RS09895 PF02557 D-alanyl-D-alanine carboxypeptidase UP15_RS09900 PF01048 Phosphorylase superfamily UP15_RS09905 PF14191 YodL-like UP15_RS09910 PF01569 PAP2 superfamily UP15_RS09920 PF06855 YozE SAM-like fold UP15_RS09925 PF14122 YokU-like protein, putative antitoxin UP15_RS09930 PF12544 Lysine-2,3-aminomutase UP15_RS09935 PF02954 Bacterial regulatory protein, Fis family UP15_RS09935 PF13426 PAS domain UP15_RS09935 PF00158 Sigma-54 interaction domain UP15_RS09940 PF00535 Glycosyl transferase family 2 UP15_RS09955 PF12996 DUF based on E. rectale Gene description (DUF3880) UP15_RS09965 PF02719 Polysaccharide biosynthesis protein UP15_RS09970 PF01641 SelR domain UP15_RS09975 PF01625 Peptide methionine sulfoxide reductase UP15_RS09980 PF01047 MarR family UP15_RS09995 PF17431 Uncharacterized YmpT-like UP15_RS10000 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) UP15_RS10005 PF13472 GDSL-like Lipase/Acylhydrolase family UP15_RS10010 PF02630 SCO1/SenC UP15_RS10015 PF02645 Uncharacterised protein, DegV family COG1307 UP15_RS10020 PF10751 Protein of unknown function (DUF2535) UP15_RS10025 PF00291 Pyridoxal-phosphate dependent enzyme UP15_RS10025 PF00585 C-terminal regulatory domain of Threonine dehydratase UP15_RS10030 PF00158 Sigma-54 interaction domain UP15_RS10030 PF08461 Ribonuclease R winged-helix domain UP15_RS10035 PF03006 Haemolysin-III related UP15_RS10045 PF00186 Dihydrofolate reductase UP15_RS10050 PF00303 Thymidylate synthase UP15_RS10055 PF04608 Phosphatidylglycerophosphatase A UP15_RS10060 PF14005 YpjP-like protein UP15_RS10065 PF04445 Putative SAM-dependent methyltransferase UP15_RS10070 PF06491 Disulphide isomerase UP15_RS10075 PF00920 Dehydratase family UP15_RS10085 PF01966 HD domain UP15_RS10090 PF00255 Glutathione peroxidase UP15_RS10095 PF01268 Formate--tetrahydrofolate ligase UP15_RS10100 PF04204 Homoserine O-succinyltransferase UP15_RS10105 PF00534 Glycosyl transferases group 1 UP15_RS10105 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase UP15_RS10120 PF00313 'Cold-shock' DNA-binding domain UP15_RS10130 PF10782 Zinc-finger UP15_RS10135 PF13456 Reverse transcriptase-like UP15_RS10140 PF02592 Putative vitamin uptake transporter UP15_RS10145 PF13456 Reverse transcriptase-like UP15_RS10155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UP15_RS10155 PF01367 5'-3' exonuclease, C-terminal SAM fold UP15_RS10160 PF10752 Protein of unknown function (DUF2533) UP15_RS10165 PF00350 Dynamin family UP15_RS10170 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family UP15_RS10175 PF00195 Chalcone and stilbene synthases, N-terminal domain UP15_RS10175 PF02797 Chalcone and stilbene synthases, C-terminal domain UP15_RS10185 PF04229 GrpB protein UP15_RS10185 PF13673 Acetyltransferase (GNAT) domain UP15_RS10190 PF01522 Polysaccharide deacetylase UP15_RS10195 PF00860 Permease family UP15_RS10205 PF02074 Carboxypeptidase Taq (M32) metallopeptidase UP15_RS10210 PF13307 Helicase C-terminal domain UP15_RS10220 PF01170 Putative RNA methylase family UPF0020 UP15_RS10220 PF02926 THUMP domain UP15_RS10230 PF05103 DivIVA protein UP15_RS10235 PF06908 YspA SLOG family UP15_RS10240 PF13482 RNase_H superfamily UP15_RS10245 PF00271 Helicase conserved C-terminal domain UP15_RS10245 PF09369 Domain of unknown function (DUF1998) UP15_RS10245 PF00270 DEAD/DEAH box helicase UP15_RS10250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UP15_RS10255 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP15_RS10265 PF14179 YppG-like protein UP15_RS10285 PF10720 Protein of unknown function (DUF2515) UP15_RS10290 PF03838 Recombination protein U UP15_RS10295 PF00905 Penicillin binding protein transpeptidase domain UP15_RS10295 PF00912 Transglycosylase UP15_RS10305 PF00730 HhH-GPD superfamily base excision DNA repair protein UP15_RS10305 PF00633 Helix-hairpin-helix motif UP15_RS10305 PF10576 Iron-sulfur binding domain of endonuclease III UP15_RS10310 PF07261 Replication initiation and membrane attachment UP15_RS10315 PF01336 OB-fold nucleic acid binding domain UP15_RS10315 PF00152 tRNA synthetases class II (D, K and N) UP15_RS10320 PF17881 Domain of unknown function (DUF5590) UP15_RS10320 PF03413 Peptidase propeptide and YPEB domain UP15_RS10325 PF13307 Helicase C-terminal domain UP15_RS10325 PF04851 Type III restriction enzyme, res subunit UP15_RS10325 PF00929 Exonuclease UP15_RS10330 PF02261 Aspartate decarboxylase UP15_RS10335 PF02569 Pantoate-beta-alanine ligase UP15_RS10340 PF02548 Ketopantoate hydroxymethyltransferase UP15_RS10345 PF02237 Biotin protein ligase C terminal domain UP15_RS10345 PF03099 Biotin/lipoate A/B protein ligase family UP15_RS10345 PF08279 HTH domain UP15_RS10350 PF13735 tRNA nucleotidyltransferase domain 2 putative UP15_RS10350 PF12627 Probable RNA and SrmB- binding site of polymerase A UP15_RS10350 PF01743 Poly A polymerase head domain UP15_RS10355 PF00534 Glycosyl transferases group 1 UP15_RS10355 PF13439 Glycosyltransferase Family 4 UP15_RS10360 PF02585 GlcNAc-PI de-N-acetylase UP15_RS10365 PF02142 MGS-like domain UP15_RS10370 PF05173 Dihydrodipicolinate reductase, C-terminus UP15_RS10370 PF01113 Dihydrodipicolinate reductase, N-terminus UP15_RS10375 PF03819 MazG nucleotide pyrophosphohydrolase domain UP15_RS10380 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP15_RS10380 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP15_RS10385 PF09577 Sporulation protein YpjB (SpoYpjB) UP15_RS10390 PF07187 Protein of unknown function (DUF1405) UP15_RS10395 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UP15_RS10395 PF00032 Cytochrome b(C-terminal)/b6/petD UP15_RS10400 PF00033 Cytochrome b/b6/petB UP15_RS10405 PF00355 Rieske [2Fe-2S] domain UP15_RS10410 PF10673 Protein of unknown function (DUF2487) UP15_RS10415 PF08858 IDEAL domain UP15_RS10415 PF08864 UPF0302 domain UP15_RS10425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UP15_RS10430 PF01842 ACT domain UP15_RS10430 PF02153 Prephenate dehydrogenase UP15_RS10435 PF00155 Aminotransferase class I and II UP15_RS10440 PF00290 Tryptophan synthase alpha chain UP15_RS10445 PF00291 Pyridoxal-phosphate dependent enzyme UP15_RS10450 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase UP15_RS10455 PF00218 Indole-3-glycerol phosphate synthase UP15_RS10460 PF02885 Glycosyl transferase family, helical bundle domain UP15_RS10460 PF00591 Glycosyl transferase family, a/b domain UP15_RS10465 PF00425 chorismate binding enzyme UP15_RS10465 PF04715 Anthranilate synthase component I, N terminal region UP15_RS10470 PF07736 Chorismate mutase type I UP15_RS10475 PF01761 3-dehydroquinate synthase UP15_RS10480 PF01264 Chorismate synthase UP15_RS10485 PF03705 CheR methyltransferase, all-alpha domain UP15_RS10485 PF01739 CheR methyltransferase, SAM binding domain UP15_RS10490 PF00334 Nucleoside diphosphate kinase UP15_RS10495 PF00348 Polyprenyl synthetase UP15_RS10500 PF01209 ubiE/COQ5 methyltransferase family UP15_RS10505 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 UP15_RS10510 PF02081 Tryptophan RNA-binding attenuator protein UP15_RS10515 PF01227 GTP cyclohydrolase I UP15_RS10520 PF00216 Bacterial DNA-binding protein UP15_RS10525 PF09547 Stage IV sporulation protein A (spore_IV_A) UP15_RS10535 PF10966 Protein of unknown function (DUF2768) UP15_RS10540 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UP15_RS10540 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus UP15_RS10545 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UP15_RS10545 PF01926 50S ribosome-binding GTPase UP15_RS10555 PF14045 YIEGIA protein UP15_RS10565 PF01070 FMN-dependent dehydrogenase UP15_RS10570 PF00575 S1 RNA binding domain UP15_RS10575 PF02224 Cytidylate kinase UP15_RS10580 PF17313 Family of unknown function (DUF5359) UP15_RS10585 PF12945 Flagellar protein YcgR UP15_RS10585 PF07238 PilZ domain UP15_RS10590 PF14620 YpeB sporulation UP15_RS10590 PF03413 Peptidase propeptide and YPEB domain UP15_RS10595 PF07486 Cell Wall Hydrolase UP15_RS10595 PF01471 Putative peptidoglycan binding domain UP15_RS10600 PF13367 PrsW family intramembrane metalloprotease UP15_RS10610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP15_RS10610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP15_RS10615 PF05389 Negative regulator of genetic competence (MecA) UP15_RS10620 PF00149 Calcineurin-like phosphoesterase UP15_RS10625 PF10864 Protein of unknown function (DUF2663) UP15_RS10630 PF01476 LysM domain UP15_RS10635 PF02517 CPBP intramembrane metalloprotease UP15_RS10640 PF00270 DEAD/DEAH box helicase UP15_RS10640 PF00271 Helicase conserved C-terminal domain UP15_RS10645 PF14493 Helix-turn-helix domain UP15_RS10655 PF12822 ECF transporter, substrate-specific component UP15_RS10660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP15_RS10660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP15_RS10660 PF01842 ACT domain UP15_RS10665 PF01476 LysM domain UP15_RS10665 PF01551 Peptidase family M23 UP15_RS10675 PF04542 Sigma-70 region 2 UP15_RS10675 PF08281 Sigma-70, region 4 UP15_RS10680 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS10680 PF00989 PAS fold UP15_RS10680 PF18698 Histidine kinase sensor domain UP15_RS10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS10680 PF00672 HAMP domain UP15_RS10685 PF00486 Transcriptional regulatory protein, C terminal UP15_RS10685 PF00072 Response regulator receiver domain UP15_RS10690 PF01578 Cytochrome C assembly protein UP15_RS10695 PF05140 ResB-like family UP15_RS10700 PF00578 AhpC/TSA family UP15_RS10705 PF01479 S4 domain UP15_RS10705 PF00849 RNA pseudouridylate synthase UP15_RS10710 PF07670 Nucleoside recognition UP15_RS10715 PF07670 Nucleoside recognition UP15_RS10720 PF00768 D-alanyl-D-alanine carboxypeptidase UP15_RS10720 PF07943 Penicillin-binding protein 5, C-terminal domain UP15_RS10725 PF13047 Protein of unknown function (DUF3907) UP15_RS10730 PF04079 Segregation and condensation complex subunit ScpB UP15_RS10735 PF02616 Segregation and condensation protein ScpA UP15_RS10740 PF03745 Domain of unknown function (DUF309) UP15_RS10745 PF00583 Acetyltransferase (GNAT) family UP15_RS10750 PF00885 6,7-dimethyl-8-ribityllumazine synthase UP15_RS10760 PF00677 Lumazine binding domain UP15_RS10780 PF07690 Major Facilitator Superfamily UP15_RS10785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UP15_RS10790 PF06207 Protein of unknown function (DUF1002) UP15_RS10795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UP15_RS10795 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UP15_RS10800 PF03323 Bacillus/Clostridium GerA spore germination protein UP15_RS10805 PF14097 Stage V sporulation protein AE1 UP15_RS10810 PF03862 SpoVAC/SpoVAEB sporulation membrane protein UP15_RS10815 PF07451 Stage V sporulation protein AD (SpoVAD) UP15_RS10820 PF03862 SpoVAC/SpoVAEB sporulation membrane protein UP15_RS10825 PF13782 Stage V sporulation protein AB UP15_RS10830 PF12164 Stage V sporulation protein AA UP15_RS10835 PF04545 Sigma-70, region 4 UP15_RS10835 PF04539 Sigma-70 region 3 UP15_RS10835 PF04542 Sigma-70 region 2 UP15_RS10840 PF13581 Histidine kinase-like ATPase domain UP15_RS10845 PF01740 STAS domain UP15_RS10850 PF00768 D-alanyl-D-alanine carboxypeptidase UP15_RS10850 PF07943 Penicillin-binding protein 5, C-terminal domain UP15_RS10855 PF01048 Phosphorylase superfamily UP15_RS10860 PF01676 Metalloenzyme superfamily UP15_RS10865 PF00589 Phage integrase family UP15_RS10865 PF02899 Phage integrase, N-terminal SAM-like domain UP15_RS10870 PF14004 Protein of unknown function (DUF4227) UP15_RS10875 PF01475 Ferric uptake regulator family UP15_RS10880 PF01944 Stage II sporulation protein M UP15_RS10885 PF00082 Subtilase family UP15_RS10885 PF05922 Peptidase inhibitor I9 UP15_RS10895 PF13673 Acetyltransferase (GNAT) domain UP15_RS10905 PF00293 NUDIX domain UP15_RS10910 PF00248 Aldo/keto reductase family UP15_RS10920 PF12146 Serine aminopeptidase, S33 UP15_RS10925 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS10930 PF10827 Protein of unknown function (DUF2552) UP15_RS10935 PF01521 Iron-sulphur cluster biosynthesis UP15_RS10940 PF03330 Lytic transglycolase UP15_RS10945 PF13673 Acetyltransferase (GNAT) domain UP15_RS10945 PF04229 GrpB protein UP15_RS10950 PF00583 Acetyltransferase (GNAT) family UP15_RS10955 PF10787 Uncharacterised protein from bacillus cereus group UP15_RS10960 PF11799 impB/mucB/samB family C-terminal domain UP15_RS10960 PF00817 impB/mucB/samB family UP15_RS10965 PF08863 YolD-like protein UP15_RS10970 PF07690 Major Facilitator Superfamily UP15_RS10975 PF00485 Phosphoribulokinase / Uridine kinase family UP15_RS10980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP15_RS10980 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS10990 PF00106 short chain dehydrogenase UP15_RS10995 PF00753 Metallo-beta-lactamase superfamily UP15_RS11000 PF03807 NADP oxidoreductase coenzyme F420-dependent UP15_RS11000 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP15_RS11015 PF04055 Radical SAM superfamily UP15_RS11020 PF01546 Peptidase family M20/M25/M40 UP15_RS11025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UP15_RS11030 PF12146 Serine aminopeptidase, S33 UP15_RS11035 PF12897 Alanine-glyoxylate amino-transferase UP15_RS11040 PF12706 Beta-lactamase superfamily domain UP15_RS11045 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain UP15_RS11045 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain UP15_RS11050 PF00392 Bacterial regulatory proteins, gntR family UP15_RS11050 PF07702 UTRA domain UP15_RS11055 PF00232 Glycosyl hydrolase family 1 UP15_RS11060 PF02378 Phosphotransferase system, EIIC UP15_RS11065 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit UP15_RS11070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP15_RS11085 PF06800 Sugar transport protein UP15_RS11090 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain UP15_RS11090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP15_RS11095 PF00817 impB/mucB/samB family UP15_RS11095 PF11799 impB/mucB/samB family C-terminal domain UP15_RS11095 PF11798 IMS family HHH motif UP15_RS11105 PF02096 60Kd inner membrane protein UP15_RS11110 PF01584 CheW-like domain UP15_RS11115 PF01546 Peptidase family M20/M25/M40 UP15_RS11115 PF07687 Peptidase dimerisation domain UP15_RS11120 PF01039 Carboxyl transferase domain UP15_RS11130 PF03734 L,D-transpeptidase catalytic domain UP15_RS11135 PF06081 Aromatic acid exporter family member 1 UP15_RS11135 PF11728 Putative aromatic acid exporter C-terminal domain UP15_RS11140 PF00005 ABC transporter UP15_RS11145 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS11150 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP15_RS11155 PF06491 Disulphide isomerase UP15_RS11160 PF00781 Diacylglycerol kinase catalytic domain UP15_RS11170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP15_RS11170 PF00364 Biotin-requiring enzyme UP15_RS11170 PF02817 e3 binding domain UP15_RS11175 PF02780 Transketolase, C-terminal domain UP15_RS11175 PF02779 Transketolase, pyrimidine binding domain UP15_RS11180 PF00676 Dehydrogenase E1 component UP15_RS11185 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS11185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP15_RS11190 PF00871 Acetokinase family UP15_RS11195 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP15_RS11195 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP15_RS11200 PF01515 Phosphate acetyl/butaryl transferase UP15_RS11205 PF02954 Bacterial regulatory protein, Fis family UP15_RS11205 PF00158 Sigma-54 interaction domain UP15_RS11205 PF00989 PAS fold UP15_RS11210 PF11118 Protein of unknown function (DUF2627) UP15_RS11215 PF03009 Glycerophosphoryl diester phosphodiesterase family UP15_RS11220 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS11225 PF00072 Response regulator receiver domain UP15_RS11225 PF08769 Sporulation initiation factor Spo0A C terminal UP15_RS11230 PF05580 SpoIVB peptidase S55 UP15_RS11230 PF17820 PDZ domain UP15_RS11235 PF13476 AAA domain UP15_RS11240 PF02863 Arginine repressor, C-terminal domain UP15_RS11240 PF01316 Arginine repressor, DNA binding domain UP15_RS11245 PF01479 S4 domain UP15_RS11245 PF01728 FtsJ-like methyltransferase UP15_RS11250 PF13292 1-deoxy-D-xylulose-5-phosphate synthase UP15_RS11250 PF02779 Transketolase, pyrimidine binding domain UP15_RS11250 PF02780 Transketolase, C-terminal domain UP15_RS11255 PF00348 Polyprenyl synthetase UP15_RS11260 PF02609 Exonuclease VII small subunit UP15_RS11265 PF13742 OB-fold nucleic acid binding domain UP15_RS11265 PF02601 Exonuclease VII, large subunit UP15_RS11270 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UP15_RS11270 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UP15_RS11275 PF01029 NusB family UP15_RS11280 PF03780 Asp23 family, cell envelope-related function UP15_RS11285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP15_RS11285 PF00289 Biotin carboxylase, N-terminal domain UP15_RS11285 PF02785 Biotin carboxylase C-terminal domain UP15_RS11290 PF00364 Biotin-requiring enzyme UP15_RS11295 PF12685 SpoIIIAH-like protein UP15_RS11305 PF09581 Stage III sporulation protein AF (Spore_III_AF) UP15_RS11310 PF09546 Stage III sporulation protein AE (spore_III_AE) UP15_RS11315 PF06686 Stage III sporulation protein AC/AD protein family UP15_RS11320 PF06686 Stage III sporulation protein AC/AD protein family UP15_RS11325 PF09548 Stage III sporulation protein AB (spore_III_AB) UP15_RS11335 PF10942 Protein of unknown function (DUF2619) UP15_RS11340 PF01132 Elongation factor P (EF-P) OB domain UP15_RS11340 PF08207 Elongation factor P (EF-P) KOW-like domain UP15_RS11340 PF09285 Elongation factor P, C-terminal UP15_RS11345 PF00557 Metallopeptidase family M24 UP15_RS11345 PF01321 Creatinase/Prolidase N-terminal domain UP15_RS11350 PF01220 Dehydroquinase class II UP15_RS11355 PF11085 Conserved membrane protein YqhR UP15_RS11360 PF07136 Protein of unknown function (DUF1385) UP15_RS11370 PF01734 Patatin-like phospholipase UP15_RS11375 PF02742 Iron dependent repressor, metal binding and dimerisation domain UP15_RS11375 PF01325 Iron dependent repressor, N-terminal DNA binding domain UP15_RS11380 PF03099 Biotin/lipoate A/B protein ligase family UP15_RS11385 PF00581 Rhodanese-like domain UP15_RS11390 PF02347 Glycine cleavage system P-protein UP15_RS11395 PF02347 Glycine cleavage system P-protein UP15_RS11400 PF01571 Aminomethyltransferase folate-binding domain UP15_RS11400 PF08669 Glycine cleavage T-protein C-terminal barrel domain UP15_RS11405 PF00176 SNF2 family N-terminal domain UP15_RS11405 PF00271 Helicase conserved C-terminal domain UP15_RS11410 PF11079 Bacterial protein YqhG of unknown function UP15_RS11415 PF08671 Anti-repressor SinI UP15_RS11415 PF01381 Helix-turn-helix UP15_RS11420 PF12389 Camelysin metallo-endopeptidase UP15_RS11435 PF13028 Protein of unknown function (DUF3889) UP15_RS11440 PF14038 YqzE-like protein UP15_RS11460 PF07963 Prokaryotic N-terminal methylation motif UP15_RS11465 PF07963 Prokaryotic N-terminal methylation motif UP15_RS11470 PF00482 Type II secretion system (T2SS), protein F UP15_RS11475 PF00437 Type II/IV secretion system protein UP15_RS11480 PF01740 STAS domain UP15_RS11480 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain UP15_RS11490 PF03960 ArsC family UP15_RS11495 PF11117 Protein of unknown function (DUF2626) UP15_RS11500 PF00753 Metallo-beta-lactamase superfamily UP15_RS11505 PF01910 Thiamine-binding protein UP15_RS11510 PF07690 Major Facilitator Superfamily UP15_RS11515 PF00246 Zinc carboxypeptidase UP15_RS11520 PF00884 Sulfatase UP15_RS11525 PF00480 ROK family UP15_RS11530 PF06014 Bacterial protein of unknown function (DUF910) UP15_RS11535 PF01694 Rhomboid family UP15_RS11545 PF01812 5-formyltetrahydrofolate cyclo-ligase family UP15_RS11550 PF00471 Ribosomal protein L33 UP15_RS11570 PF00005 ABC transporter UP15_RS11575 PF00005 ABC transporter UP15_RS11580 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS11585 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS11590 PF12849 PBP superfamily domain UP15_RS11595 PF00905 Penicillin binding protein transpeptidase domain UP15_RS11595 PF03717 Penicillin-binding Protein dimerisation domain UP15_RS11600 PF07690 Major Facilitator Superfamily UP15_RS11605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UP15_RS11605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UP15_RS11610 PF04306 Protein of unknown function (DUF456) UP15_RS11615 PF06691 Protein of unknown function (DUF1189) UP15_RS11620 PF13302 Acetyltransferase (GNAT) domain UP15_RS11630 PF04551 GcpE protein UP15_RS11645 PF00480 ROK family UP15_RS11650 PF01475 Ferric uptake regulator family UP15_RS11655 PF00950 ABC 3 transport family UP15_RS11660 PF00005 ABC transporter UP15_RS11665 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP15_RS11665 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP15_RS11670 PF11116 Protein of unknown function (DUF2624) UP15_RS11675 PF01261 Xylose isomerase-like TIM barrel UP15_RS11680 PF00271 Helicase conserved C-terminal domain UP15_RS11680 PF00270 DEAD/DEAH box helicase UP15_RS11690 PF02401 LytB protein UP15_RS11695 PF01784 NIF3 (NGG1p interacting factor 3) UP15_RS11700 PF04816 tRNA (adenine(22)-N(1))-methyltransferase UP15_RS11705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UP15_RS11710 PF00140 Sigma-70 factor, region 1.2 UP15_RS11710 PF04542 Sigma-70 region 2 UP15_RS11710 PF04539 Sigma-70 region 3 UP15_RS11710 PF04545 Sigma-70, region 4 UP15_RS11710 PF03979 Sigma-70 factor, region 1.1 UP15_RS11715 PF10410 DnaB-helicase binding domain of primase UP15_RS11715 PF08275 DNA primase catalytic core, N-terminal domain UP15_RS11715 PF01807 CHC2 zinc finger UP15_RS11720 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 UP15_RS11725 PF03618 Kinase/pyrophosphorylase UP15_RS11730 PF08279 HTH domain UP15_RS11730 PF00571 CBS domain UP15_RS11735 PF02092 Glycyl-tRNA synthetase beta subunit UP15_RS11740 PF02091 Glycyl-tRNA synthetase alpha subunit UP15_RS11745 PF11967 Recombination protein O N terminal UP15_RS11745 PF02565 Recombination protein O C terminal UP15_RS11750 PF07650 KH domain UP15_RS11750 PF01926 50S ribosome-binding GTPase UP15_RS11755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP15_RS11760 PF01219 Prokaryotic diacylglycerol kinase UP15_RS11765 PF02130 Uncharacterized protein family UPF0054 UP15_RS11770 PF07697 7TM-HD extracellular UP15_RS11770 PF07698 7TM receptor with intracellular HD hydrolase UP15_RS11770 PF01966 HD domain UP15_RS11775 PF02562 PhoH-like protein UP15_RS11780 PF06898 Putative stage IV sporulation protein YqfD UP15_RS11785 PF07873 YabP family UP15_RS11800 PF12127 SigmaW regulon antibacterial UP15_RS11805 PF01972 Serine dehydrogenase proteinase UP15_RS11805 PF01957 NfeD-like C-terminal, partner-binding UP15_RS11810 PF09424 Yqey-like protein UP15_RS11815 PF01165 Ribosomal protein S21 UP15_RS11820 PF02690 Na+/Pi-cotransporter UP15_RS11825 PF01938 TRAM domain UP15_RS11825 PF00919 Uncharacterized protein family UPF0004 UP15_RS11825 PF04055 Radical SAM superfamily UP15_RS11830 PF04452 RNA methyltransferase UP15_RS11840 PF01556 DnaJ C terminal domain UP15_RS11840 PF00226 DnaJ domain UP15_RS11840 PF00684 DnaJ central domain UP15_RS11845 PF00012 Hsp70 protein UP15_RS11850 PF01025 GrpE UP15_RS11855 PF01628 HrcA protein C terminal domain UP15_RS11860 PF04055 Radical SAM superfamily UP15_RS11860 PF06969 HemN C-terminal domain UP15_RS11865 PF00679 Elongation factor G C-terminus UP15_RS11865 PF00009 Elongation factor Tu GTP binding domain UP15_RS11865 PF03144 Elongation factor Tu domain 2 UP15_RS11865 PF06421 GTP-binding protein LepA C-terminus UP15_RS11870 PF12438 Protein of unknown function (DUF3679) UP15_RS11875 PF07454 Stage II sporulation protein P (SpoIIP) UP15_RS11880 PF03418 Germination protease UP15_RS11885 PF01649 Ribosomal protein S20 UP15_RS11890 PF06144 DNA polymerase III, delta subunit UP15_RS11895 PF00753 Metallo-beta-lactamase superfamily UP15_RS11895 PF13567 Domain of unknown function (DUF4131) UP15_RS11895 PF03772 Competence protein UP15_RS11900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP15_RS11905 PF10531 SLBB domain UP15_RS11910 PF03807 NADP oxidoreductase coenzyme F420-dependent UP15_RS11910 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP15_RS11915 PF13649 Methyltransferase domain UP15_RS11925 PF01966 HD domain UP15_RS11930 PF01467 Cytidylyltransferase-like UP15_RS11935 PF01985 CRS1 / YhbY (CRM) domain UP15_RS11940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain UP15_RS11940 PF08501 Shikimate dehydrogenase substrate binding domain UP15_RS11940 PF01488 Shikimate / quinate 5-dehydrogenase UP15_RS11945 PF01926 50S ribosome-binding GTPase UP15_RS11955 PF08970 Sporulation inhibitor A UP15_RS11960 PF00657 GDSL-like Lipase/Acylhydrolase UP15_RS11965 PF01522 Polysaccharide deacetylase UP15_RS11970 PF13176 Tetratricopeptide repeat UP15_RS11970 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS11975 PF04542 Sigma-70 region 2 UP15_RS11975 PF04545 Sigma-70, region 4 UP15_RS11980 PF07508 Recombinase UP15_RS11980 PF00239 Resolvase, N terminal domain UP15_RS11980 PF13408 Recombinase zinc beta ribbon domain UP15_RS12020 PF01510 N-acetylmuramoyl-L-alanine amidase UP15_RS12020 PF01471 Putative peptidoglycan binding domain UP15_RS12025 PF04688 SPP1 phage holin UP15_RS12030 PF10960 BhlA holin family UP15_RS12055 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) UP15_RS12060 PF04865 Baseplate J-like protein UP15_RS12065 PF10934 Protein of unknown function (DUF2634) UP15_RS12070 PF10844 Protein of unknown function (DUF2577) UP15_RS12080 PF01476 LysM domain UP15_RS12085 PF01464 Transglycosylase SLT domain UP15_RS12085 PF01464 Transglycosylase SLT domain UP15_RS12090 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC UP15_RS12100 PF09393 Phage tail tube protein UP15_RS12105 PF04984 Phage tail sheath protein subtilisin-like domain UP15_RS12105 PF17482 Phage tail sheath C-terminal domain UP15_RS12105 PF17481 Phage tail sheath protein beta-sandwich domain UP15_RS12120 PF04883 Bacteriophage HK97-gp10, putative tail-component UP15_RS12125 PF12206 Domain of unknown function (DUF3599) UP15_RS12130 PF11436 Protein of unknown function (DUF3199) UP15_RS12135 PF14553 YqbF, hypothetical protein domain UP15_RS12140 PF05065 Phage capsid family UP15_RS12145 PF14550 Putative phage serine protease XkdF UP15_RS12150 PF04233 Phage Mu protein F like protein UP15_RS12155 PF04860 Phage portal protein UP15_RS12160 PF04466 Phage terminase large subunit UP15_RS12160 PF17288 Terminase RNAseH like domain UP15_RS12230 PF05866 Endodeoxyribonuclease RusA UP15_RS12240 PF03796 DnaB-like helicase C terminal domain UP15_RS12240 PF00772 DnaB-like helicase N terminal domain UP15_RS12265 PF09466 Hypothetical protein Yqai UP15_RS12290 PF01381 Helix-turn-helix UP15_RS12295 PF06114 IrrE N-terminal-like domain UP15_RS12315 PF04545 Sigma-70, region 4 UP15_RS12315 PF04542 Sigma-70 region 2 UP15_RS12330 PF00293 NUDIX domain UP15_RS12330 PF13344 Haloacid dehalogenase-like hydrolase UP15_RS12340 PF11738 Protein of unknown function (DUF3298) UP15_RS12340 PF01522 Polysaccharide deacetylase UP15_RS12340 PF13739 Deacetylase PdaC UP15_RS12355 PF09221 Bacteriocin class IId cyclical uberolysin-like UP15_RS12375 PF00005 ABC transporter UP15_RS12395 PF00083 Sugar (and other) transporter UP15_RS12400 PF11762 L-arabinose isomerase C-terminal domain UP15_RS12400 PF02610 L-arabinose isomerase UP15_RS12405 PF00596 Class II Aldolase and Adducin N-terminal domain UP15_RS12415 PF00392 Bacterial regulatory proteins, gntR family UP15_RS12425 PF01047 MarR family UP15_RS12435 PF01380 SIS domain UP15_RS12440 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UP15_RS12445 PF01638 HxlR-like helix-turn-helix UP15_RS12450 PF07859 alpha/beta hydrolase fold UP15_RS12460 PF14176 YxiJ-like protein UP15_RS12480 PF00905 Penicillin binding protein transpeptidase domain UP15_RS12485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP15_RS12485 PF02770 Acyl-CoA dehydrogenase, middle domain UP15_RS12485 PF08028 Acyl-CoA dehydrogenase, C-terminal domain UP15_RS12490 PF00005 ABC transporter UP15_RS12495 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP15_RS12500 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS12505 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS12510 PF05067 Manganese containing catalase UP15_RS12515 PF00107 Zinc-binding dehydrogenase UP15_RS12515 PF08240 Alcohol dehydrogenase GroES-like domain UP15_RS12530 PF00465 Iron-containing alcohol dehydrogenase UP15_RS12535 PF01235 Sodium:alanine symporter family UP15_RS12540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS12540 PF03466 LysR substrate binding domain UP15_RS12555 PF00005 ABC transporter UP15_RS12560 PF08240 Alcohol dehydrogenase GroES-like domain UP15_RS12560 PF00107 Zinc-binding dehydrogenase UP15_RS12565 PF08241 Methyltransferase domain UP15_RS12570 PF14143 YrhC-like protein UP15_RS12575 PF01053 Cys/Met metabolism PLP-dependent enzyme UP15_RS12580 PF00291 Pyridoxal-phosphate dependent enzyme UP15_RS12585 PF01048 Phosphorylase superfamily UP15_RS12590 PF13649 Methyltransferase domain UP15_RS12595 PF10750 Protein of unknown function (DUF2536) UP15_RS12600 PF07423 Domain of unknown function (DUF1510) UP15_RS12605 PF00905 Penicillin binding protein transpeptidase domain UP15_RS12605 PF03717 Penicillin-binding Protein dimerisation domain UP15_RS12610 PF01272 Transcription elongation factor, GreA/GreB, C-term UP15_RS12610 PF03449 Transcription elongation factor, N-terminal UP15_RS12615 PF00485 Phosphoribulokinase / Uridine kinase family UP15_RS12620 PF16325 Peptidase family U32 C-terminal domain UP15_RS12620 PF01136 Peptidase family U32 UP15_RS12625 PF01136 Peptidase family U32 UP15_RS12630 PF01596 O-methyltransferase UP15_RS12635 PF02618 YceG-like family UP15_RS12640 PF02803 Thiolase, C-terminal domain UP15_RS12640 PF00108 Thiolase, N-terminal domain UP15_RS12645 PF13193 AMP-binding enzyme C-terminal domain UP15_RS12645 PF00501 AMP-binding enzyme UP15_RS12650 PF02632 BioY family UP15_RS12655 PF06949 Protein of unknown function (DUF1292) UP15_RS12660 PF03652 Holliday junction resolvase UP15_RS12665 PF06135 IreB regulatory phosphoprotein UP15_RS12670 PF01411 tRNA synthetases class II (A) UP15_RS12670 PF02272 DHHA1 domain UP15_RS12670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UP15_RS12675 PF01594 AI-2E family transporter UP15_RS12680 PF00005 ABC transporter UP15_RS12685 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP15_RS12690 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS12695 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS12705 PF05239 PRC-barrel domain UP15_RS12710 PF14490 Helix-hairpin-helix containing domain UP15_RS12710 PF13538 UvrD-like helicase C-terminal domain UP15_RS12710 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain UP15_RS12715 PF13181 Tetratricopeptide repeat UP15_RS12715 PF07719 Tetratricopeptide repeat UP15_RS12725 PF00266 Aminotransferase class-V UP15_RS12730 PF02082 Transcriptional regulator UP15_RS12735 PF16193 AAA C-terminal domain UP15_RS12735 PF12002 MgsA AAA+ ATPase C terminal UP15_RS12735 PF05496 Holliday junction DNA helicase RuvB P-loop domain UP15_RS12740 PF00899 ThiF family UP15_RS12750 PF01336 OB-fold nucleic acid binding domain UP15_RS12750 PF02938 GAD domain UP15_RS12750 PF00152 tRNA synthetases class II (D, K and N) UP15_RS12755 PF13393 Histidyl-tRNA synthetase UP15_RS12755 PF03129 Anticodon binding domain UP15_RS12760 PF08239 Bacterial SH3 domain UP15_RS12760 PF01520 N-acetylmuramoyl-L-alanine amidase UP15_RS12765 PF02580 D-Tyr-tRNA(Tyr) deacylase UP15_RS12770 PF02824 TGS domain UP15_RS12770 PF04607 Region found in RelA / SpoT proteins UP15_RS12770 PF13291 ACT domain UP15_RS12775 PF00156 Phosphoribosyl transferase domain UP15_RS12780 PF10141 Single-strand DNA-specific exonuclease, C terminal domain UP15_RS12780 PF01368 DHH family UP15_RS12780 PF02272 DHHA1 domain UP15_RS12780 PF17768 RecJ OB domain UP15_RS12785 PF06305 Lipopolysaccharide assembly protein A domain UP15_RS12790 PF02080 TrkA-C domain UP15_RS12795 PF02355 Protein export membrane protein UP15_RS12795 PF07549 SecD/SecF GG Motif UP15_RS12800 PF13797 Post-transcriptional regulator UP15_RS12805 PF14667 Polysaccharide biosynthesis C-terminal domain UP15_RS12805 PF01943 Polysaccharide biosynthesis protein UP15_RS12810 PF04239 Protein of unknown function (DUF421) UP15_RS12815 PF12670 Protein of unknown function (DUF3792) UP15_RS12820 PF02699 Preprotein translocase subunit UP15_RS12825 PF01702 Queuine tRNA-ribosyltransferase UP15_RS12830 PF02547 Queuosine biosynthesis protein UP15_RS12835 PF11146 Protein of unknown function (DUF2905) UP15_RS12840 PF17864 RuvB AAA lid domain UP15_RS12840 PF05491 RuvB C-terminal winged helix domain UP15_RS12840 PF05496 Holliday junction DNA helicase RuvB P-loop domain UP15_RS12845 PF07499 RuvA, C-terminal domain UP15_RS12845 PF01330 RuvA N terminal domain UP15_RS12850 PF08977 Bypass of Forespore C, N terminal UP15_RS12850 PF08955 BofC C-terminal domain UP15_RS12865 PF13667 ThiC-associated domain UP15_RS12865 PF01964 Radical SAM ThiC family UP15_RS12875 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) UP15_RS12880 PF01476 LysM domain UP15_RS12885 PF02445 Quinolinate synthetase A protein UP15_RS12890 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain UP15_RS12890 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain UP15_RS12895 PF00890 FAD binding domain UP15_RS12895 PF02910 Fumarate reductase flavoprotein C-term UP15_RS12900 PF00266 Aminotransferase class-V UP15_RS12905 PF02829 3H domain UP15_RS12905 PF08279 HTH domain UP15_RS12910 PF01842 ACT domain UP15_RS12910 PF00800 Prephenate dehydratase UP15_RS12915 PF01842 ACT domain UP15_RS12920 PF09269 Domain of unknown function (DUF1967) UP15_RS12920 PF01926 50S ribosome-binding GTPase UP15_RS12920 PF01018 GTP1/OBG UP15_RS12925 PF14682 Sporulation initiation phospho-transferase B, C-terminal UP15_RS12925 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP15_RS12930 PF01016 Ribosomal L27 protein UP15_RS12935 PF04327 Cysteine protease Prp UP15_RS12940 PF00829 Ribosomal prokaryotic L21 protein UP15_RS12945 PF02163 Peptidase family M50 UP15_RS12950 PF01551 Peptidase family M23 UP15_RS12955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UP15_RS12960 PF03775 Septum formation inhibitor MinC, C-terminal domain UP15_RS12965 PF04093 rod shape-determining protein MreD UP15_RS12970 PF04085 rod shape-determining protein MreC UP15_RS12980 PF04002 RadC-like JAB domain UP15_RS12985 PF02545 Maf-like protein UP15_RS12995 PF06750 Bacterial Peptidase A24 N-terminal domain UP15_RS12995 PF01478 Type IV leader peptidase family UP15_RS13000 PF02875 Mur ligase family, glutamate ligase domain UP15_RS13000 PF08245 Mur ligase middle domain UP15_RS13005 PF10458 Valyl tRNA synthetase tRNA binding arm UP15_RS13005 PF00133 tRNA synthetases class I (I, L, M and V) UP15_RS13005 PF08264 Anticodon-binding domain of tRNA UP15_RS13020 PF01476 LysM domain UP15_RS13025 PF00202 Aminotransferase class-III UP15_RS13030 PF00490 Delta-aminolevulinic acid dehydratase UP15_RS13035 PF02602 Uroporphyrinogen-III synthase HemD UP15_RS13040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain UP15_RS13040 PF03900 Porphobilinogen deaminase, C-terminal domain UP15_RS13045 PF01578 Cytochrome C assembly protein UP15_RS13050 PF01488 Shikimate / quinate 5-dehydrogenase UP15_RS13050 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain UP15_RS13050 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain UP15_RS13070 PF01926 50S ribosome-binding GTPase UP15_RS13075 PF00004 ATPase family associated with various cellular activities (AAA) UP15_RS13075 PF05362 Lon protease (S16) C-terminal proteolytic domain UP15_RS13075 PF02190 ATP-dependent protease La (LON) substrate-binding domain UP15_RS13080 PF05362 Lon protease (S16) C-terminal proteolytic domain UP15_RS13080 PF00004 ATPase family associated with various cellular activities (AAA) UP15_RS13085 PF10431 C-terminal, D2-small domain, of ClpB protein UP15_RS13085 PF07724 AAA domain (Cdc48 subfamily) UP15_RS13085 PF06689 ClpX C4-type zinc finger UP15_RS13090 PF05697 Bacterial trigger factor protein (TF) UP15_RS13090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UP15_RS13090 PF05698 Bacterial trigger factor protein (TF) C-terminus UP15_RS13100 PF00694 Aconitase C-terminal domain UP15_RS13105 PF00330 Aconitase family (aconitate hydratase) UP15_RS13110 PF00180 Isocitrate/isopropylmalate dehydrogenase UP15_RS13115 PF08502 LeuA allosteric (dimerisation) domain UP15_RS13115 PF00682 HMGL-like UP15_RS13120 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain UP15_RS13120 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain UP15_RS13125 PF01842 ACT domain UP15_RS13125 PF10369 Small subunit of acetolactate synthase UP15_RS13130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP15_RS13130 PF00205 Thiamine pyrophosphate enzyme, central domain UP15_RS13130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP15_RS13135 PF01063 Amino-transferase class IV UP15_RS13140 PF10282 Lactonase, 7-bladed beta-propeller UP15_RS13145 PF06803 Protein of unknown function (DUF1232) UP15_RS13150 PF04914 DltD protein UP15_RS13155 PF00550 Phosphopantetheine attachment site UP15_RS13160 PF03062 MBOAT, membrane-bound O-acyltransferase family UP15_RS13165 PF13193 AMP-binding enzyme C-terminal domain UP15_RS13165 PF00501 AMP-binding enzyme UP15_RS13170 PF12459 D-Ala-teichoic acid biosynthesis protein UP15_RS13175 PF14449 Pre-toxin TG UP15_RS13175 PF04740 LXG domain of WXG superfamily UP15_RS13175 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues UP15_RS13190 PF00239 Resolvase, N terminal domain UP15_RS13190 PF02796 Helix-turn-helix domain of resolvase UP15_RS13195 PF01420 Type I restriction modification DNA specificity domain UP15_RS13200 PF02384 N-6 DNA Methylase UP15_RS13205 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) UP15_RS13205 PF00271 Helicase conserved C-terminal domain UP15_RS13205 PF08463 EcoEI R protein C-terminal UP15_RS13205 PF04851 Type III restriction enzyme, res subunit UP15_RS13220 PF12850 Calcineurin-like phosphoesterase superfamily domain UP15_RS13225 PF01725 Ham1 family UP15_RS13230 PF01138 3' exoribonuclease family, domain 1 UP15_RS13230 PF03725 3' exoribonuclease family, domain 2 UP15_RS13235 PF10646 Sporulation and spore germination UP15_RS13240 PF01177 Asp/Glu/Hydantoin racemase UP15_RS13245 PF01047 MarR family UP15_RS13250 PF00196 Bacterial regulatory proteins, luxR family UP15_RS13255 PF03600 Citrate transporter UP15_RS13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS13260 PF03466 LysR substrate binding domain UP15_RS13265 PF04303 PrpF protein UP15_RS13270 PF03099 Biotin/lipoate A/B protein ligase family UP15_RS13270 PF02237 Biotin protein ligase C terminal domain UP15_RS13275 PF03061 Thioesterase superfamily UP15_RS13280 PF13085 2Fe-2S iron-sulfur cluster binding domain UP15_RS13280 PF13183 4Fe-4S dicluster domain UP15_RS13285 PF00890 FAD binding domain UP15_RS13285 PF02910 Fumarate reductase flavoprotein C-term UP15_RS13290 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UP15_RS13295 PF10702 Protein of unknown function (DUF2507) UP15_RS13300 PF00696 Amino acid kinase family UP15_RS13300 PF01842 ACT domain UP15_RS13300 PF13840 ACT domain UP15_RS13305 PF02151 UvrB/uvrC motif UP15_RS13305 PF08459 UvrC Helix-hairpin-helix N-terminal UP15_RS13305 PF01541 GIY-YIG catalytic domain UP15_RS13310 PF00085 Thioredoxin UP15_RS13315 PF06964 Alpha-L-arabinofuranosidase C-terminal domain UP15_RS13320 PF00766 Electron transfer flavoprotein FAD-binding domain UP15_RS13320 PF01012 Electron transfer flavoprotein domain UP15_RS13325 PF01012 Electron transfer flavoprotein domain UP15_RS13330 PF00378 Enoyl-CoA hydratase/isomerase UP15_RS13335 PF00440 Bacterial regulatory proteins, tetR family UP15_RS13335 PF08359 YsiA-like protein, C-terminal region UP15_RS13340 PF13193 AMP-binding enzyme C-terminal domain UP15_RS13340 PF00501 AMP-binding enzyme UP15_RS13350 PF03994 Domain of Unknown Function (DUF350) UP15_RS13355 PF00488 MutS domain V UP15_RS13355 PF01713 Smr domain UP15_RS13360 PF14716 Helix-hairpin-helix domain UP15_RS13360 PF02811 PHP domain UP15_RS13360 PF14791 DNA polymerase beta thumb UP15_RS13365 PF02674 Colicin V production protein UP15_RS13370 PF05164 Cell division protein ZapA UP15_RS13375 PF01351 Ribonuclease HII UP15_RS13375 PF11858 Domain of unknown function (DUF3378) UP15_RS13380 PF03483 B3/4 domain UP15_RS13380 PF03484 tRNA synthetase B5 domain UP15_RS13380 PF01588 Putative tRNA binding domain UP15_RS13380 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain UP15_RS13380 PF03147 Ferredoxin-fold anticodon binding domain UP15_RS13385 PF01409 tRNA synthetases class II core domain (F) UP15_RS13385 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain UP15_RS13390 PF00588 SpoU rRNA Methylase family UP15_RS13390 PF08032 RNA 2'-O ribose methyltransferase substrate binding UP15_RS13395 PF14098 Small, acid-soluble spore protein I UP15_RS13400 PF13722 5TM C-terminal transporter carbon starvation CstA UP15_RS13400 PF02554 Carbon starvation protein CstA UP15_RS13405 PF05343 M42 glutamyl aminopeptidase UP15_RS13415 PF06961 Protein of unknown function (DUF1294) UP15_RS13420 PF00453 Ribosomal protein L20 UP15_RS13425 PF01632 Ribosomal protein L35 UP15_RS13430 PF00707 Translation initiation factor IF-3, C-terminal domain UP15_RS13430 PF05198 Translation initiation factor IF-3, N-terminal domain UP15_RS13435 PF04172 LrgB-like family UP15_RS13440 PF03788 LrgA family UP15_RS13445 PF04397 LytTr DNA-binding domain UP15_RS13445 PF00072 Response regulator receiver domain UP15_RS13450 PF07694 5TMR of 5TMR-LYT UP15_RS13450 PF06580 Histidine kinase UP15_RS13450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS13455 PF13419 Haloacid dehalogenase-like hydrolase UP15_RS13460 PF13426 PAS domain UP15_RS13460 PF08447 PAS fold UP15_RS13460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS13465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UP15_RS13465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP15_RS13465 PF02824 TGS domain UP15_RS13465 PF03129 Anticodon binding domain UP15_RS13470 PF08812 YtxC-like family UP15_RS13475 PF09335 SNARE associated Golgi protein UP15_RS13480 PF07319 Primosomal protein DnaI N-terminus UP15_RS13480 PF01695 IstB-like ATP binding protein UP15_RS13485 PF07261 Replication initiation and membrane attachment UP15_RS13490 PF03477 ATP cone domain UP15_RS13500 PF02675 S-adenosylmethionine decarboxylase UP15_RS13505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UP15_RS13505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UP15_RS13510 PF01121 Dephospho-CoA kinase UP15_RS13515 PF02659 Putative manganese efflux pump UP15_RS13520 PF06827 Zinc finger found in FPG and IleRS UP15_RS13520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UP15_RS13520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain UP15_RS13525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UP15_RS13525 PF00476 DNA polymerase family A UP15_RS13525 PF01367 5'-3' exonuclease, C-terminal SAM fold UP15_RS13530 PF00989 PAS fold UP15_RS13530 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS13530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS13530 PF16736 Single Cache-like UP15_RS13535 PF00486 Transcriptional regulatory protein, C terminal UP15_RS13535 PF00072 Response regulator receiver domain UP15_RS13540 PF00056 lactate/malate dehydrogenase, NAD binding domain UP15_RS13540 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UP15_RS13545 PF00180 Isocitrate/isopropylmalate dehydrogenase UP15_RS13550 PF00285 Citrate synthase, C-terminal domain UP15_RS13555 PF04284 Protein of unknown function (DUF441) UP15_RS13560 PF01594 AI-2E family transporter UP15_RS13565 PF04186 FxsA cytoplasmic membrane protein UP15_RS13570 PF00391 PEP-utilising enzyme, mobile domain UP15_RS13570 PF00224 Pyruvate kinase, barrel domain UP15_RS13570 PF02887 Pyruvate kinase, alpha/beta domain UP15_RS13575 PF00365 Phosphofructokinase UP15_RS13580 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UP15_RS13585 PF01039 Carboxyl transferase domain UP15_RS13585 PF17848 Acetyl-coA carboxylase zinc finger domain UP15_RS13590 PF00390 Malic enzyme, N-terminal domain UP15_RS13590 PF03949 Malic enzyme, NAD binding domain UP15_RS13595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UP15_RS13595 PF01336 OB-fold nucleic acid binding domain UP15_RS13595 PF02811 PHP domain UP15_RS13595 PF14579 Helix-hairpin-helix motif UP15_RS13595 PF07733 Bacterial DNA polymerase III alpha NTPase domain UP15_RS13600 PF14034 Sporulation protein YtrH UP15_RS13615 PF01368 DHH family UP15_RS13615 PF02272 DHHA1 domain UP15_RS13620 PF14007 YtpI-like protein UP15_RS13625 PF00571 CBS domain UP15_RS13625 PF07085 DRTGG domain UP15_RS13625 PF00392 Bacterial regulatory proteins, gntR family UP15_RS13625 PF03061 Thioesterase superfamily UP15_RS13645 PF14698 Argininosuccinate lyase C-terminal UP15_RS13645 PF00206 Lyase UP15_RS13650 PF00764 Arginosuccinate synthase UP15_RS13655 PF00994 Probable molybdopterin binding domain UP15_RS13660 PF00871 Acetokinase family UP15_RS13665 PF02384 N-6 DNA Methylase UP15_RS13670 PF08534 Redoxin UP15_RS13675 PF09579 Sporulation protein YtfJ (Spore_YtfJ) UP15_RS13680 PF11167 Protein of unknown function (DUF2953) UP15_RS13685 PF06271 RDD family UP15_RS13690 PF01343 Peptidase family S49 UP15_RS13695 PF01513 ATP-NAD kinase UP15_RS13700 PF00270 DEAD/DEAH box helicase UP15_RS13700 PF03880 DbpA RNA binding domain UP15_RS13700 PF00271 Helicase conserved C-terminal domain UP15_RS13705 PF00487 Fatty acid desaturase UP15_RS13710 PF07730 Histidine kinase UP15_RS13715 PF00072 Response regulator receiver domain UP15_RS13715 PF00196 Bacterial regulatory proteins, luxR family UP15_RS13720 PF01497 Periplasmic binding protein UP15_RS13725 PF00072 Response regulator receiver domain UP15_RS13725 PF00486 Transcriptional regulatory protein, C terminal UP15_RS13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS13735 PF01098 Cell cycle protein UP15_RS13740 PF03551 Transcriptional regulator PadR-like family UP15_RS13745 PF00005 ABC transporter UP15_RS13750 PF02687 FtsX-like permease family UP15_RS13755 PF01979 Amidohydrolase family UP15_RS13760 PF02525 Flavodoxin-like fold UP15_RS13775 PF01810 LysE type translocator UP15_RS13780 PF13193 AMP-binding enzyme C-terminal domain UP15_RS13780 PF00501 AMP-binding enzyme UP15_RS13785 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP15_RS13790 PF02568 Thiamine biosynthesis protein (ThiI) UP15_RS13790 PF02926 THUMP domain UP15_RS13795 PF00266 Aminotransferase class-V UP15_RS13800 PF05525 Branched-chain amino acid transport protein UP15_RS13805 PF05525 Branched-chain amino acid transport protein UP15_RS13810 PF06160 Septation ring formation regulator, EzrA UP15_RS13815 PF02811 PHP domain UP15_RS13820 PF00440 Bacterial regulatory proteins, tetR family UP15_RS13825 PF13185 GAF domain UP15_RS13830 PF01479 S4 domain UP15_RS13830 PF00163 Ribosomal protein S4/S9 N-terminal domain UP15_RS13840 PF00857 Isochorismatase family UP15_RS13850 PF01674 Lipase (class 2) UP15_RS13855 PF03992 Antibiotic biosynthesis monooxygenase UP15_RS13860 PF01479 S4 domain UP15_RS13860 PF00579 tRNA synthetases class I (W and Y) UP15_RS13865 PF00501 AMP-binding enzyme UP15_RS13865 PF13193 AMP-binding enzyme C-terminal domain UP15_RS13870 PF00583 Acetyltransferase (GNAT) family UP15_RS13875 PF00571 CBS domain UP15_RS13880 PF00850 Histone deacetylase domain UP15_RS13885 PF00356 Bacterial regulatory proteins, lacI family UP15_RS13890 PF00793 DAHP synthetase I family UP15_RS13890 PF01817 Chorismate mutase type II UP15_RS13895 PF11009 Protein of unknown function (DUF2847) UP15_RS13900 PF12732 YtxH-like protein UP15_RS13905 PF06103 Bacterial protein of unknown function (DUF948) UP15_RS13910 PF08245 Mur ligase middle domain UP15_RS13910 PF02875 Mur ligase family, glutamate ligase domain UP15_RS13910 PF01225 Mur ligase family, catalytic domain UP15_RS13915 PF01580 FtsK/SpoIIIE family UP15_RS13915 PF09397 Ftsk gamma domain UP15_RS13915 PF17854 FtsK alpha domain UP15_RS13920 PF01588 Putative tRNA binding domain UP15_RS13920 PF14794 Domain of unknown function (DUF4479) UP15_RS13925 PF07285 Protein of unknown function (DUF1444) UP15_RS13930 PF00085 Thioredoxin UP15_RS13940 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ UP15_RS13945 PF05343 M42 glutamyl aminopeptidase UP15_RS13950 PF03413 Peptidase propeptide and YPEB domain UP15_RS13955 PF00390 Malic enzyme, N-terminal domain UP15_RS13955 PF03949 Malic enzyme, NAD binding domain UP15_RS13960 PF00753 Metallo-beta-lactamase superfamily UP15_RS13965 PF02390 Putative methyltransferase UP15_RS13970 PF14165 YtzH-like protein UP15_RS13975 PF01636 Phosphotransferase enzyme family UP15_RS13980 PF00781 Diacylglycerol kinase catalytic domain UP15_RS13995 PF00291 Pyridoxal-phosphate dependent enzyme UP15_RS14000 PF03575 Peptidase family S51 UP15_RS14005 PF01546 Peptidase family M20/M25/M40 UP15_RS14010 PF00860 Permease family UP15_RS14015 PF08220 DeoR-like helix-turn-helix domain UP15_RS14020 PF01479 S4 domain UP15_RS14020 PF00849 RNA pseudouridylate synthase UP15_RS14025 PF14667 Polysaccharide biosynthesis C-terminal domain UP15_RS14025 PF01943 Polysaccharide biosynthesis protein UP15_RS14040 PF02028 BCCT, betaine/carnitine/choline family transporter UP15_RS14045 PF03691 Uncharacterised protein family (UPF0167) UP15_RS14050 PF10957 Sporulation protein Cse60 UP15_RS14055 PF00581 Rhodanese-like domain UP15_RS14060 PF04854 Protein of unknown function, DUF624 UP15_RS14065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UP15_RS14065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP15_RS14075 PF07470 Glycosyl Hydrolase Family 88 UP15_RS14080 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS14085 PF12833 Helix-turn-helix domain UP15_RS14085 PF17853 GGDEF-like domain UP15_RS14090 PF01638 HxlR-like helix-turn-helix UP15_RS14095 PF07690 Major Facilitator Superfamily UP15_RS14100 PF00248 Aldo/keto reductase family UP15_RS14105 PF13416 Bacterial extracellular solute-binding protein UP15_RS14110 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS14115 PF01370 NAD dependent epimerase/dehydratase family UP15_RS14120 PF01738 Dienelactone hydrolase family UP15_RS14125 PF13603 Leucyl-tRNA synthetase, Domain 2 UP15_RS14125 PF00133 tRNA synthetases class I (I, L, M and V) UP15_RS14125 PF08264 Anticodon-binding domain of tRNA UP15_RS14125 PF09334 tRNA synthetases class I (M) UP15_RS14130 PF14074 Protein of unknown function (DUF4257) UP15_RS14135 PF01740 STAS domain UP15_RS14135 PF13426 PAS domain UP15_RS14145 PF04791 LMBR1-like membrane protein UP15_RS14150 PF12704 MacB-like periplasmic core domain UP15_RS14150 PF02687 FtsX-like permease family UP15_RS14155 PF00005 ABC transporter UP15_RS14165 PF00005 ABC transporter UP15_RS14170 PF00392 Bacterial regulatory proteins, gntR family UP15_RS14190 PF10732 Protein of unknown function (DUF2524) UP15_RS14195 PF16199 Radical_SAM C-terminal domain UP15_RS14195 PF04055 Radical SAM superfamily UP15_RS14200 PF06962 Putative rRNA methylase UP15_RS14205 PF07070 SpoOM protein UP15_RS14210 PF10776 Protein of unknown function (DUF2600) UP15_RS14215 PF12146 Serine aminopeptidase, S33 UP15_RS14220 PF00132 Bacterial transferase hexapeptide (six repeats) UP15_RS14225 PF13537 Glutamine amidotransferase domain UP15_RS14225 PF00733 Asparagine synthase UP15_RS14230 PF02772 S-adenosylmethionine synthetase, central domain UP15_RS14230 PF02773 S-adenosylmethionine synthetase, C-terminal domain UP15_RS14230 PF00438 S-adenosylmethionine synthetase, N-terminal domain UP15_RS14235 PF01293 Phosphoenolpyruvate carboxykinase UP15_RS14240 PF10763 Protein of unknown function (DUF2584) UP15_RS14245 PF00326 Prolyl oligopeptidase family UP15_RS14250 PF01593 Flavin containing amine oxidoreductase UP15_RS14255 PF00535 Glycosyl transferase family 2 UP15_RS14275 PF00005 ABC transporter UP15_RS14280 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS14285 PF00293 NUDIX domain UP15_RS14290 PF02342 TerD domain UP15_RS14305 PF05105 Bacteriophage holin family UP15_RS14315 PF00210 Ferritin-like domain UP15_RS14325 PF13115 YtkA-like UP15_RS14330 PF02664 S-Ribosylhomocysteinase (LuxS) UP15_RS14335 PF01809 Putative membrane protein insertion efficiency factor UP15_RS14340 PF00484 Carbonic anhydrase UP15_RS14345 PF01297 Zinc-uptake complex component A periplasmic UP15_RS14345 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment UP15_RS14350 PF01197 Ribosomal protein L31 UP15_RS14355 PF01654 Cytochrome bd terminal oxidase subunit I UP15_RS14360 PF02322 Cytochrome bd terminal oxidase subunit II UP15_RS14370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UP15_RS14370 PF13378 Enolase C-terminal domain-like UP15_RS14375 PF00501 AMP-binding enzyme UP15_RS14375 PF13193 AMP-binding enzyme C-terminal domain UP15_RS14380 PF00378 Enoyl-CoA hydratase/isomerase UP15_RS14385 PF00561 alpha/beta hydrolase fold UP15_RS14390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP15_RS14390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP15_RS14390 PF16582 Middle domain of thiamine pyrophosphate UP15_RS14395 PF00425 chorismate binding enzyme UP15_RS14400 PF01040 UbiA prenyltransferase family UP15_RS14405 PF01258 Prokaryotic dksA/traR C4-type zinc finger UP15_RS14410 PF03073 TspO/MBR family UP15_RS14415 PF00665 Integrase core domain UP15_RS14415 PF13333 Integrase core domain UP15_RS14545 PF09515 Thiamine transporter protein (Thia_YuaJ) UP15_RS14550 PF00583 Acetyltransferase (GNAT) family UP15_RS14555 PF06803 Protein of unknown function (DUF1232) UP15_RS14560 PF01098 Cell cycle protein UP15_RS14565 PF01098 Cell cycle protein UP15_RS14570 PF15975 Flotillin UP15_RS14570 PF01145 SPFH domain / Band 7 family UP15_RS14580 PF12867 DinB superfamily UP15_RS14585 PF00465 Iron-containing alcohol dehydrogenase UP15_RS14590 PF00171 Aldehyde dehydrogenase family UP15_RS14610 PF01510 N-acetylmuramoyl-L-alanine amidase UP15_RS14610 PF01471 Putative peptidoglycan binding domain UP15_RS14615 PF04688 SPP1 phage holin UP15_RS14620 PF10960 BhlA holin family UP15_RS14655 PF09693 Phage uncharacterised protein (Phage_XkdX) UP15_RS14660 PF09636 XkdW protein UP15_RS14675 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) UP15_RS14680 PF04865 Baseplate J-like protein UP15_RS14685 PF10934 Protein of unknown function (DUF2634) UP15_RS14690 PF10844 Protein of unknown function (DUF2577) UP15_RS14700 PF01476 LysM domain UP15_RS14705 PF01464 Transglycosylase SLT domain UP15_RS14710 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC UP15_RS14715 PF09393 Phage tail tube protein UP15_RS14720 PF17481 Phage tail sheath protein beta-sandwich domain UP15_RS14720 PF17482 Phage tail sheath C-terminal domain UP15_RS14720 PF04984 Phage tail sheath protein subtilisin-like domain UP15_RS14735 PF04883 Bacteriophage HK97-gp10, putative tail-component UP15_RS14740 PF12206 Domain of unknown function (DUF3599) UP15_RS14745 PF11436 Protein of unknown function (DUF3199) UP15_RS14750 PF05065 Phage capsid family UP15_RS14755 PF14550 Putative phage serine protease XkdF UP15_RS14760 PF04860 Phage portal protein UP15_RS14765 PF04466 Phage terminase large subunit UP15_RS14765 PF17288 Terminase RNAseH like domain UP15_RS14770 PF10668 Phage terminase small subunit UP15_RS14775 PF08281 Sigma-70, region 4 UP15_RS14780 PF17356 Phage-like element PBSX protein XtrA UP15_RS14785 PF05866 Endodeoxyribonuclease RusA UP15_RS14800 PF01381 Helix-turn-helix UP15_RS14810 PF06968 Biotin and Thiamin Synthesis associated domain UP15_RS14810 PF04055 Radical SAM superfamily UP15_RS14820 PF02673 Bacitracin resistance protein BacA UP15_RS14825 PF01594 AI-2E family transporter UP15_RS14835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UP15_RS14835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP15_RS14840 PF01965 DJ-1/PfpI family UP15_RS14845 PF02743 Cache domain UP15_RS14845 PF00672 HAMP domain UP15_RS14845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS14850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS14850 PF00672 HAMP domain UP15_RS14850 PF02743 Cache domain UP15_RS14855 PF02743 Cache domain UP15_RS14855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS14855 PF00672 HAMP domain UP15_RS14860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS14860 PF02743 Cache domain UP15_RS14860 PF00672 HAMP domain UP15_RS14875 PF03060 Nitronate monooxygenase UP15_RS14880 PF01894 Uncharacterised protein family UPF0047 UP15_RS14885 PF00571 CBS domain UP15_RS14885 PF01595 Cyclin M transmembrane N-terminal domain UP15_RS14885 PF03471 Transporter associated domain UP15_RS14890 PF04298 Putative neutral zinc metallopeptidase UP15_RS14900 PF02254 TrkA-N domain UP15_RS14900 PF07885 Ion channel UP15_RS14905 PF08868 YugN-like family UP15_RS14915 PF00342 Phosphoglucose isomerase UP15_RS14920 PF00465 Iron-containing alcohol dehydrogenase UP15_RS14925 PF00465 Iron-containing alcohol dehydrogenase UP15_RS14930 PF04070 Domain of unknown function (DUF378) UP15_RS14935 PF00575 S1 RNA binding domain UP15_RS14940 PF00155 Aminotransferase class I and II UP15_RS14945 PF01037 Lrp/AsnC ligand binding domain UP15_RS14950 PF00561 alpha/beta hydrolase fold UP15_RS14950 PF08386 TAP-like protein UP15_RS14955 PF08958 Domain of unknown function (DUF1871) UP15_RS14960 PF00155 Aminotransferase class I and II UP15_RS14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS14965 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS14970 PF08810 Kinase associated protein B UP15_RS14975 PF00929 Exonuclease UP15_RS14980 PF07690 Major Facilitator Superfamily UP15_RS14985 PF00912 Transglycosylase UP15_RS14985 PF00905 Penicillin binding protein transpeptidase domain UP15_RS14990 PF04134 Protein of unknown function, DUF393 UP15_RS14995 PF17328 Family of unknown function (DUF5366) UP15_RS15000 PF00989 PAS fold UP15_RS15000 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP15_RS15000 PF17203 Single cache domain 3 UP15_RS15000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS15005 PF00072 Response regulator receiver domain UP15_RS15010 PF02608 ABC transporter substrate-binding protein PnrA-like UP15_RS15015 PF00005 ABC transporter UP15_RS15020 PF02653 Branched-chain amino acid transport system / permease component UP15_RS15025 PF02653 Branched-chain amino acid transport system / permease component UP15_RS15030 PF03390 2-hydroxycarboxylate transporter family UP15_RS15045 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UP15_RS15045 PF00361 Proton-conducting membrane transporter UP15_RS15045 PF13244 Domain of unknown function (DUF4040) UP15_RS15050 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter UP15_RS15055 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UP15_RS15060 PF00361 Proton-conducting membrane transporter UP15_RS15065 PF01899 Na+/H+ ion antiporter subunit UP15_RS15070 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) UP15_RS15075 PF03334 Na+/H+ antiporter subunit UP15_RS15080 PF03061 Thioesterase superfamily UP15_RS15085 PF00072 Response regulator receiver domain UP15_RS15085 PF00196 Bacterial regulatory proteins, luxR family UP15_RS15090 PF07730 Histidine kinase UP15_RS15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS15095 PF00348 Polyprenyl synthetase UP15_RS15100 PF08181 DegQ (SacQ) family UP15_RS15110 PF00563 EAL domain UP15_RS15110 PF08668 HDOD domain UP15_RS15115 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family UP15_RS15115 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain UP15_RS15115 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain UP15_RS15120 PF00857 Isochorismatase family UP15_RS15125 PF07997 Protein of unknown function (DUF1694) UP15_RS15130 PF14166 YueH-like protein UP15_RS15135 PF10676 Spore germination protein gerPA/gerPF UP15_RS15140 PF10676 Spore germination protein gerPA/gerPF UP15_RS15145 PF01594 AI-2E family transporter UP15_RS15150 PF10842 Protein of unknown function (DUF2642) UP15_RS15160 PF01966 HD domain UP15_RS15165 PF00106 short chain dehydrogenase UP15_RS15170 PF17355 Family of unknown function (DUF5383) UP15_RS15180 PF01580 FtsK/SpoIIIE family UP15_RS15180 PF12538 DNA transporter UP15_RS15185 PF10140 WXG100 protein secretion system (Wss), protein YukC UP15_RS15190 PF08817 WXG100 protein secretion system (Wss), protein YukD UP15_RS15195 PF06013 Proteins of 100 residues with WXG UP15_RS15200 PF13556 PucR C-terminal helix-turn-helix domain UP15_RS15200 PF17853 GGDEF-like domain UP15_RS15200 PF06018 CodY GAF-like domain UP15_RS15205 PF05222 Alanine dehydrogenase/PNT, N-terminal domain UP15_RS15205 PF01262 Alanine dehydrogenase/PNT, C-terminal domain UP15_RS15210 PF02632 BioY family UP15_RS15215 PF03553 Na+/H+ antiporter family UP15_RS15215 PF13726 Na+-H+ antiporter family UP15_RS15220 PF02789 Cytosol aminopeptidase family, N-terminal domain UP15_RS15220 PF00883 Cytosol aminopeptidase family, catalytic domain UP15_RS15225 PF02681 Divergent PAP2 family UP15_RS15230 PF06725 3D domain UP15_RS15235 PF14068 Putative membrane protein UP15_RS15240 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS15245 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS15260 PF13411 MerR HTH family regulatory protein UP15_RS15260 PF07739 TipAS antibiotic-recognition domain UP15_RS15265 PF10026 Predicted Zn-dependent protease (DUF2268) UP15_RS15270 PF01521 Iron-sulphur cluster biosynthesis UP15_RS15275 PF01678 Diaminopimelate epimerase UP15_RS15280 PF07293 Protein of unknown function (DUF1450) UP15_RS15285 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS15295 PF07315 Protein of unknown function (DUF1462) UP15_RS15300 PF01106 NifU-like domain UP15_RS15305 PF07676 WD40-like Beta Propeller Repeat UP15_RS15305 PF00326 Prolyl oligopeptidase family UP15_RS15310 PF08544 GHMP kinases C terminal UP15_RS15310 PF00288 GHMP kinases N terminal domain UP15_RS15315 PF00291 Pyridoxal-phosphate dependent enzyme UP15_RS15320 PF01842 ACT domain UP15_RS15320 PF00742 Homoserine dehydrogenase UP15_RS15320 PF03447 Homoserine dehydrogenase, NAD binding domain UP15_RS15325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP15_RS15325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP15_RS15335 PF04608 Phosphatidylglycerophosphatase A UP15_RS15340 PF13344 Haloacid dehalogenase-like hydrolase UP15_RS15345 PF01934 Protein of unknown function DUF86 UP15_RS15350 PF06265 Protein of unknown function (DUF1027) UP15_RS15355 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) UP15_RS15360 PF04055 Radical SAM superfamily UP15_RS15360 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family UP15_RS15365 PF01551 Peptidase family M23 UP15_RS15375 PF10903 Protein of unknown function (DUF2691) UP15_RS15380 PF09560 Sporulation protein YunB (Spo_YunB) UP15_RS15385 PF08827 Domain of unknown function (DUF1805) UP15_RS15390 PF02872 5'-nucleotidase, C-terminal domain UP15_RS15395 PF01904 Protein of unknown function DUF72 UP15_RS15400 PF07905 Purine catabolism regulatory protein-like family UP15_RS15400 PF17853 GGDEF-like domain UP15_RS15400 PF13556 PucR C-terminal helix-turn-helix domain UP15_RS15405 PF00190 Cupin UP15_RS15410 PF07690 Major Facilitator Superfamily UP15_RS15415 PF00266 Aminotransferase class-V UP15_RS15420 PF04231 Endonuclease I UP15_RS15430 PF01032 FecCD transport family UP15_RS15435 PF01032 FecCD transport family UP15_RS15440 PF01497 Periplasmic binding protein UP15_RS15450 PF07859 alpha/beta hydrolase fold UP15_RS15455 PF06146 Phosphate-starvation-inducible E UP15_RS15460 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS15465 PF00486 Transcriptional regulatory protein, C terminal UP15_RS15465 PF00072 Response regulator receiver domain UP15_RS15470 PF04235 Protein of unknown function (DUF418) UP15_RS15480 PF02525 Flavodoxin-like fold UP15_RS15485 PF01370 NAD dependent epimerase/dehydratase family UP15_RS15485 PF08338 Domain of unknown function (DUF1731) UP15_RS15490 PF00440 Bacterial regulatory proteins, tetR family UP15_RS15490 PF18665 Tetracyclin repressor-like, C-terminal domain UP15_RS15495 PF01458 Uncharacterized protein family (UPF0051) UP15_RS15500 PF01592 NifU-like N terminal domain UP15_RS15505 PF00266 Aminotransferase class-V UP15_RS15510 PF01458 Uncharacterized protein family (UPF0051) UP15_RS15515 PF00005 ABC transporter UP15_RS15520 PF02627 Carboxymuconolactone decarboxylase family UP15_RS15525 PF03180 NLPA lipoprotein UP15_RS15530 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS15535 PF00005 ABC transporter UP15_RS15535 PF09383 NIL domain UP15_RS15540 PF02036 SCP-2 sterol transfer family UP15_RS15545 PF00085 Thioredoxin UP15_RS15550 PF01751 Toprim domain UP15_RS15555 PF10830 Protein of unknown function (DUF2553) UP15_RS15560 PF01597 Glycine cleavage H-protein UP15_RS15565 PF03960 ArsC family UP15_RS15570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP15_RS15570 PF02770 Acyl-CoA dehydrogenase, middle domain UP15_RS15570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP15_RS15575 PF00108 Thiolase, N-terminal domain UP15_RS15575 PF02803 Thiolase, C-terminal domain UP15_RS15580 PF00378 Enoyl-CoA hydratase/isomerase UP15_RS15580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UP15_RS15580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UP15_RS15590 PF07875 Coat F domain UP15_RS15595 PF10835 Protein of unknown function (DUF2573) UP15_RS15600 PF00005 ABC transporter UP15_RS15610 PF00106 short chain dehydrogenase UP15_RS15615 PF13180 PDZ domain UP15_RS15620 PF00072 Response regulator receiver domain UP15_RS15620 PF00486 Transcriptional regulatory protein, C terminal UP15_RS15625 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS15625 PF00672 HAMP domain UP15_RS15630 PF00440 Bacterial regulatory proteins, tetR family UP15_RS15635 PF00206 Lyase UP15_RS15635 PF10415 Fumarase C C-terminus UP15_RS15640 PF03323 Bacillus/Clostridium GerA spore germination protein UP15_RS15645 PF03845 Spore germination protein UP15_RS15650 PF05504 Spore germination B3/ GerAC like, C-terminal UP15_RS15660 PF00196 Bacterial regulatory proteins, luxR family UP15_RS15660 PF00072 Response regulator receiver domain UP15_RS15665 PF00672 HAMP domain UP15_RS15665 PF07730 Histidine kinase UP15_RS15665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS15670 PF09922 Cell wall-active antibiotics response 4TMS YvqF UP15_RS15680 PF04012 PspA/IM30 family UP15_RS15690 PF01923 Cobalamin adenosyltransferase UP15_RS15695 PF00005 ABC transporter UP15_RS15700 PF01032 FecCD transport family UP15_RS15705 PF01497 Periplasmic binding protein UP15_RS15710 PF00295 Glycosyl hydrolases family 28 UP15_RS15715 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus UP15_RS15715 PF08666 SAF domain UP15_RS15720 PF01232 Mannitol dehydrogenase Rossmann domain UP15_RS15720 PF08125 Mannitol dehydrogenase C-terminal domain UP15_RS15725 PF00356 Bacterial regulatory proteins, lacI family UP15_RS15730 PF02614 Glucuronate isomerase UP15_RS15735 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS15735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS15740 PF00072 Response regulator receiver domain UP15_RS15740 PF00486 Transcriptional regulatory protein, C terminal UP15_RS15745 PF00005 ABC transporter UP15_RS15750 PF01032 FecCD transport family UP15_RS15755 PF01032 FecCD transport family UP15_RS15760 PF01497 Periplasmic binding protein UP15_RS15765 PF13520 Amino acid permease UP15_RS15770 PF09575 Small spore protein J (Spore_SspJ) UP15_RS15780 PF04307 LexA-binding, inner membrane-associated putative hydrolase UP15_RS15785 PF00884 Sulfatase UP15_RS15795 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS15800 PF00248 Aldo/keto reductase family UP15_RS15805 PF00480 ROK family UP15_RS15810 PF00999 Sodium/hydrogen exchanger family UP15_RS15815 PF03458 UPF0126 domain UP15_RS15820 PF02600 Disulfide bond formation protein DsbB UP15_RS15825 PF13462 Thioredoxin UP15_RS15830 PF00403 Heavy-metal-associated domain UP15_RS15835 PF00005 ABC transporter UP15_RS15840 PF00950 ABC 3 transport family UP15_RS15845 PF01297 Zinc-uptake complex component A periplasmic UP15_RS15855 PF13977 BetI-type transcriptional repressor, C-terminal UP15_RS15855 PF00440 Bacterial regulatory proteins, tetR family UP15_RS15860 PF00072 Response regulator receiver domain UP15_RS15860 PF08664 YcbB domain UP15_RS15865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS15870 PF00206 Lyase UP15_RS15870 PF10415 Fumarase C C-terminus UP15_RS15875 PF00375 Sodium:dicarboxylate symporter family UP15_RS15880 PF00403 Heavy-metal-associated domain UP15_RS15885 PF00403 Heavy-metal-associated domain UP15_RS15890 PF02583 Metal-sensitive transcriptional repressor UP15_RS15900 PF00072 Response regulator receiver domain UP15_RS15900 PF00990 Diguanylate cyclase, GGDEF domain UP15_RS15910 PF00535 Glycosyl transferase family 2 UP15_RS15910 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase UP15_RS15920 PF01668 SmpB protein UP15_RS15925 PF00575 S1 RNA binding domain UP15_RS15925 PF00773 RNB domain UP15_RS15925 PF08206 Ribonuclease B OB domain UP15_RS15925 PF17876 Cold shock domain UP15_RS15930 PF12146 Serine aminopeptidase, S33 UP15_RS15935 PF03840 Preprotein translocase SecG subunit UP15_RS15940 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin UP15_RS15940 PF18277 AbrB C-terminal domain UP15_RS15945 PF01381 Helix-turn-helix UP15_RS15960 PF01638 HxlR-like helix-turn-helix UP15_RS15965 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS15970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system UP15_RS15975 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS15980 PF00005 ABC transporter UP15_RS15980 PF00571 CBS domain UP15_RS15985 PF12802 MarR family UP15_RS15990 PF01914 MarC family integral membrane protein UP15_RS16000 PF00583 Acetyltransferase (GNAT) family UP15_RS16020 PF00005 ABC transporter UP15_RS16030 PF00113 Enolase, C-terminal TIM barrel domain UP15_RS16030 PF03952 Enolase, N-terminal domain UP15_RS16035 PF06415 BPG-independent PGAM N-terminus (iPGM_N) UP15_RS16035 PF01676 Metalloenzyme superfamily UP15_RS16040 PF00121 Triosephosphate isomerase UP15_RS16045 PF00162 Phosphoglycerate kinase UP15_RS16050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UP15_RS16050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UP15_RS16055 PF04198 Putative sugar-binding domain UP15_RS16060 PF00324 Amino acid permease UP15_RS16065 PF00202 Aminotransferase class-III UP15_RS16070 PF13426 PAS domain UP15_RS16070 PF02954 Bacterial regulatory protein, Fis family UP15_RS16070 PF00158 Sigma-54 interaction domain UP15_RS16075 PF00392 Bacterial regulatory proteins, gntR family UP15_RS16075 PF07729 FCD domain UP15_RS16080 PF04963 Sigma-54 factor, core binding domain UP15_RS16080 PF04552 Sigma-54, DNA binding domain UP15_RS16080 PF00309 Sigma-54 factor, Activator interacting domain (AID) UP15_RS16085 PF09628 YvfG protein UP15_RS16090 PF01554 MatE UP15_RS16095 PF00005 ABC transporter UP15_RS16095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP15_RS16100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP15_RS16100 PF00005 ABC transporter UP15_RS16105 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS16110 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS16115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP15_RS16120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UP15_RS16125 PF00132 Bacterial transferase hexapeptide (six repeats) UP15_RS16125 PF17836 PglD N-terminal domain UP15_RS16130 PF02397 Bacterial sugar transferase UP15_RS16135 PF01943 Polysaccharide biosynthesis protein UP15_RS16135 PF14667 Polysaccharide biosynthesis C-terminal domain UP15_RS16140 PF04230 Polysaccharide pyruvyl transferase UP15_RS16145 PF00535 Glycosyl transferase family 2 UP15_RS16155 PF13439 Glycosyltransferase Family 4 UP15_RS16155 PF00534 Glycosyl transferases group 1 UP15_RS16160 PF00535 Glycosyl transferase family 2 UP15_RS16165 PF00534 Glycosyl transferases group 1 UP15_RS16165 PF13439 Glycosyltransferase Family 4 UP15_RS16170 PF02719 Polysaccharide biosynthesis protein UP15_RS16175 PF13614 AAA domain UP15_RS16180 PF02706 Chain length determinant protein UP15_RS16185 PF08671 Anti-repressor SinI UP15_RS16185 PF01381 Helix-turn-helix UP15_RS16195 PF01497 Periplasmic binding protein UP15_RS16200 PF01032 FecCD transport family UP15_RS16205 PF01032 FecCD transport family UP15_RS16210 PF11738 Protein of unknown function (DUF3298) UP15_RS16210 PF13739 Deacetylase PdaC UP15_RS16210 PF01522 Polysaccharide deacetylase UP15_RS16215 PF00005 ABC transporter UP15_RS16215 PF12848 ABC transporter UP15_RS16220 PF00005 ABC transporter UP15_RS16225 PF00005 ABC transporter UP15_RS16230 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS16230 PF12911 N-terminal TM domain of oligopeptide transport permease C UP15_RS16235 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS16240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP15_RS16245 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase UP15_RS16250 PF01497 Periplasmic binding protein UP15_RS16265 PF00574 Clp protease UP15_RS16270 PF03641 Possible lysine decarboxylase UP15_RS16275 PF03819 MazG nucleotide pyrophosphohydrolase domain UP15_RS16280 PF01740 STAS domain UP15_RS16280 PF00916 Sulfate permease family UP15_RS16285 PF00484 Carbonic anhydrase UP15_RS16290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP15_RS16290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP15_RS16295 PF00545 ribonuclease UP15_RS16300 PF00797 N-acetyltransferase UP15_RS16305 PF00381 PTS HPr component phosphorylation site UP15_RS16310 PF10298 WhiA N-terminal LAGLIDADG-like domain UP15_RS16310 PF14527 WhiA LAGLIDADG-like domain UP15_RS16310 PF02650 WhiA C-terminal HTH domain UP15_RS16315 PF01933 Uncharacterised protein family UPF0052 UP15_RS16320 PF03668 P-loop ATPase protein family UP15_RS16325 PF00293 NUDIX domain UP15_RS16330 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP15_RS16335 PF00877 NlpC/P60 family UP15_RS16345 PF01502 Phosphoribosyl-AMP cyclohydrolase UP15_RS16345 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase UP15_RS16350 PF00977 Histidine biosynthesis protein UP15_RS16355 PF00977 Histidine biosynthesis protein UP15_RS16360 PF00117 Glutamine amidotransferase class-I UP15_RS16365 PF00475 Imidazoleglycerol-phosphate dehydratase UP15_RS16370 PF00815 Histidinol dehydrogenase UP15_RS16375 PF01634 ATP phosphoribosyltransferase UP15_RS16380 PF13393 Histidyl-tRNA synthetase UP15_RS16385 PF13529 Peptidase_C39 like family UP15_RS16390 PF13460 NAD(P)H-binding UP15_RS16395 PF02082 Transcriptional regulator UP15_RS16400 PF14602 Hexapeptide repeat of succinyl-transferase UP15_RS16405 PF13419 Haloacid dehalogenase-like hydrolase UP15_RS16410 PF07670 Nucleoside recognition UP15_RS16415 PF01790 Prolipoprotein diacylglyceryl transferase UP15_RS16420 PF07475 HPr Serine kinase C-terminal domain UP15_RS16420 PF02603 HPr Serine kinase N terminus UP15_RS16425 PF01979 Amidohydrolase family UP15_RS16430 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase UP15_RS16435 PF07702 UTRA domain UP15_RS16435 PF00392 Bacterial regulatory proteins, gntR family UP15_RS16440 PF00149 Calcineurin-like phosphoesterase UP15_RS16445 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV UP15_RS16450 PF04024 PspC domain UP15_RS16455 PF13349 Putative adhesin UP15_RS16470 PF17760 UvrA interaction domain UP15_RS16470 PF00005 ABC transporter UP15_RS16470 PF17755 UvrA DNA-binding domain UP15_RS16475 PF02151 UvrB/uvrC motif UP15_RS16475 PF12344 Ultra-violet resistance protein B UP15_RS16475 PF17757 UvrB interaction domain UP15_RS16475 PF04851 Type III restriction enzyme, res subunit UP15_RS16475 PF00271 Helicase conserved C-terminal domain UP15_RS16480 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) UP15_RS16485 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain UP15_RS16485 PF00391 PEP-utilising enzyme, mobile domain UP15_RS16490 PF00440 Bacterial regulatory proteins, tetR family UP15_RS16495 PF07690 Major Facilitator Superfamily UP15_RS16505 PF00072 Response regulator receiver domain UP15_RS16505 PF00486 Transcriptional regulatory protein, C terminal UP15_RS16510 PF00989 PAS fold UP15_RS16510 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS16510 PF18698 Histidine kinase sensor domain UP15_RS16510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS16510 PF00672 HAMP domain UP15_RS16515 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase UP15_RS16520 PF00535 Glycosyl transferase family 2 UP15_RS16525 PF00324 Amino acid permease UP15_RS16530 PF00881 Nitroreductase family UP15_RS16535 PF01638 HxlR-like helix-turn-helix UP15_RS16540 PF17820 PDZ domain UP15_RS16545 PF17423 Swarming motility protein UP15_RS16550 PF17820 PDZ domain UP15_RS16550 PF03572 Peptidase family S41 UP15_RS16550 PF01471 Putative peptidoglycan binding domain UP15_RS16555 PF01925 Sulfite exporter TauE/SafE UP15_RS16560 PF00877 NlpC/P60 family UP15_RS16565 PF18075 FtsX extracellular domain UP15_RS16565 PF02687 FtsX-like permease family UP15_RS16570 PF00005 ABC transporter UP15_RS16575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UP15_RS16580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP15_RS16580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP15_RS16595 PF03462 PCRF domain UP15_RS16595 PF00472 RF-1 domain UP15_RS16600 PF02810 SEC-C motif UP15_RS16600 PF07517 SecA DEAD-like domain UP15_RS16600 PF01043 SecA preprotein cross-linking domain UP15_RS16600 PF07516 SecA Wing and Scaffold domain UP15_RS16605 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein UP15_RS16605 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus UP15_RS16610 PF00672 HAMP domain UP15_RS16610 PF02743 Cache domain UP15_RS16610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS16625 PF02561 Flagellar protein FliS UP15_RS16630 PF02465 Flagellar hook-associated protein 2 N-terminus UP15_RS16630 PF07195 Flagellar hook-associated protein 2 C-terminus UP15_RS16630 PF07196 Flagellin hook IN motif UP15_RS16635 PF03646 FlaG protein UP15_RS16640 PF02599 Global regulator protein family UP15_RS16645 PF02623 FliW protein UP15_RS16655 PF00700 Bacterial flagellin C-terminal helical region UP15_RS16655 PF00669 Bacterial flagellin N-terminal helical region UP15_RS16660 PF00460 Flagella basal body rod protein UP15_RS16660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP15_RS16665 PF05130 FlgN protein UP15_RS16685 PF10719 Late competence development protein ComFB UP15_RS16690 PF00271 Helicase conserved C-terminal domain UP15_RS16690 PF04851 Type III restriction enzyme, res subunit UP15_RS16695 PF02645 Uncharacterised protein, DegV family COG1307 UP15_RS16700 PF00072 Response regulator receiver domain UP15_RS16700 PF00196 Bacterial regulatory proteins, luxR family UP15_RS16705 PF07730 Histidine kinase UP15_RS16705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS16705 PF05384 Sensor protein DegS UP15_RS16710 PF09186 Domain of unknown function (DUF1949) UP15_RS16710 PF01205 Uncharacterized protein family UPF0029 UP15_RS16720 PF00953 Glycosyl transferase family 4 UP15_RS16730 PF00535 Glycosyl transferase family 2 UP15_RS16735 PF02706 Chain length determinant protein UP15_RS16740 PF04932 O-Antigen ligase UP15_RS16745 PF16363 GDP-mannose 4,6 dehydratase UP15_RS16750 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UP15_RS16750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UP15_RS16750 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UP15_RS16755 PF13439 Glycosyltransferase Family 4 UP15_RS16755 PF00534 Glycosyl transferases group 1 UP15_RS16760 PF01943 Polysaccharide biosynthesis protein UP15_RS16760 PF14667 Polysaccharide biosynthesis C-terminal domain UP15_RS16765 PF02397 Bacterial sugar transferase UP15_RS16775 PF04122 Putative cell wall binding repeat 2 UP15_RS16775 PF01520 N-acetylmuramoyl-L-alanine amidase UP15_RS16780 PF01520 N-acetylmuramoyl-L-alanine amidase UP15_RS16780 PF04122 Putative cell wall binding repeat 2 UP15_RS16785 PF08486 Stage II sporulation protein UP15_RS16785 PF04122 Putative cell wall binding repeat 2 UP15_RS16795 PF03816 Cell envelope-related transcriptional attenuator domain UP15_RS16800 PF02350 UDP-N-acetylglucosamine 2-epimerase UP15_RS16805 PF00483 Nucleotidyl transferase UP15_RS16810 PF00005 ABC transporter UP15_RS16815 PF01061 ABC-2 type transporter UP15_RS16820 PF00535 Glycosyl transferase family 2 UP15_RS16830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UP15_RS16830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UP15_RS16830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UP15_RS16845 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase UP15_RS16855 PF01467 Cytidylyltransferase-like UP15_RS16860 PF03808 Glycosyl transferase WecB/TagA/CpsF family UP15_RS16865 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase UP15_RS16870 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase UP15_RS16870 PF08239 Bacterial SH3 domain UP15_RS16870 PF05036 Sporulation related domain UP15_RS16875 PF01238 Phosphomannose isomerase type I UP15_RS16880 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS16885 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS16890 PF01547 Bacterial extracellular solute-binding protein UP15_RS16895 PF00072 Response regulator receiver domain UP15_RS16895 PF00196 Bacterial regulatory proteins, luxR family UP15_RS16900 PF00672 HAMP domain UP15_RS16900 PF02743 Cache domain UP15_RS16900 PF06580 Histidine kinase UP15_RS16900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS16910 PF00583 Acetyltransferase (GNAT) family UP15_RS16915 PF01081 KDPG and KHG aldolase UP15_RS16920 PF00294 pfkB family carbohydrate kinase UP15_RS16925 PF00356 Bacterial regulatory proteins, lacI family UP15_RS16930 PF04962 KduI/IolB family UP15_RS16940 PF03323 Bacillus/Clostridium GerA spore germination protein UP15_RS16945 PF03845 Spore germination protein UP15_RS16950 PF05504 Spore germination B3/ GerAC like, C-terminal UP15_RS16955 PF00534 Glycosyl transferases group 1 UP15_RS16955 PF00535 Glycosyl transferase family 2 UP15_RS16960 PF00083 Sugar (and other) transporter UP15_RS16965 PF03816 Cell envelope-related transcriptional attenuator domain UP15_RS16975 PF00877 NlpC/P60 family UP15_RS16980 PF09587 Bacterial capsule synthesis protein PGA_cap UP15_RS16985 PF14102 Capsule biosynthesis CapC UP15_RS16990 PF08245 Mur ligase middle domain UP15_RS16995 PF03323 Bacillus/Clostridium GerA spore germination protein UP15_RS17005 PF05504 Spore germination B3/ GerAC like, C-terminal UP15_RS17010 PF00356 Bacterial regulatory proteins, lacI family UP15_RS17015 PF00294 pfkB family carbohydrate kinase UP15_RS17020 PF05025 RbsD / FucU transport protein family UP15_RS17025 PF00005 ABC transporter UP15_RS17030 PF02653 Branched-chain amino acid transport system / permease component UP15_RS17035 PF13407 Periplasmic binding protein domain UP15_RS17040 PF01613 Flavin reductase like domain UP15_RS17045 PF03466 LysR substrate binding domain UP15_RS17045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS17050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP15_RS17050 PF00205 Thiamine pyrophosphate enzyme, central domain UP15_RS17050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP15_RS17055 PF03306 Alpha-acetolactate decarboxylase UP15_RS17060 PF13404 AsnC-type helix-turn-helix domain UP15_RS17060 PF01037 Lrp/AsnC ligand binding domain UP15_RS17065 PF02417 Chromate transporter UP15_RS17070 PF02417 Chromate transporter UP15_RS17075 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UP15_RS17075 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UP15_RS17075 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UP15_RS17080 PF04434 SWIM zinc finger UP15_RS17085 PF12419 SNF2 Helicase protein UP15_RS17085 PF00271 Helicase conserved C-terminal domain UP15_RS17085 PF00176 SNF2 family N-terminal domain UP15_RS17090 PF13426 PAS domain UP15_RS17090 PF01740 STAS domain UP15_RS17105 PF14183 YwpF-like protein UP15_RS17110 PF01741 Large-conductance mechanosensitive channel, MscL UP15_RS17115 PF07977 FabA-like domain UP15_RS17120 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS17125 PF00460 Flagella basal body rod protein UP15_RS17125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP15_RS17130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP15_RS17130 PF00460 Flagella basal body rod protein UP15_RS17140 PF12116 Stage III sporulation protein D UP15_RS17145 PF01047 MarR family UP15_RS17150 PF07690 Major Facilitator Superfamily UP15_RS17155 PF01569 PAP2 superfamily UP15_RS17160 PF07690 Major Facilitator Superfamily UP15_RS17165 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP15_RS17170 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS17175 PF00005 ABC transporter UP15_RS17180 PF00909 Ammonium Transporter Family UP15_RS17185 PF00543 Nitrogen regulatory protein P-II UP15_RS17190 PF01551 Peptidase family M23 UP15_RS17195 PF00583 Acetyltransferase (GNAT) family UP15_RS17205 PF00471 Ribosomal protein L33 UP15_RS17210 PF02492 CobW/HypB/UreG, nucleotide-binding domain UP15_RS17210 PF07683 Cobalamin synthesis protein cobW C-terminal domain UP15_RS17215 PF00253 Ribosomal protein S14p/S29e UP15_RS17220 PF04055 Radical SAM superfamily UP15_RS17220 PF06463 Molybdenum Cofactor Synthesis C UP15_RS17225 PF02634 FdhD/NarQ family UP15_RS17230 PF07690 Major Facilitator Superfamily UP15_RS17235 PF00384 Molybdopterin oxidoreductase UP15_RS17235 PF01568 Molydopterin dinucleotide binding domain UP15_RS17235 PF18364 Molybdopterin oxidoreductase N-terminal domain UP15_RS17240 PF00092 von Willebrand factor type A domain UP15_RS17245 PF00092 von Willebrand factor type A domain UP15_RS17250 PF08486 Stage II sporulation protein UP15_RS17255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UP15_RS17260 PF08680 TATA-box binding UP15_RS17265 PF06612 Protein of unknown function (DUF1146) UP15_RS17275 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain UP15_RS17275 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain UP15_RS17280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP15_RS17280 PF02874 ATP synthase alpha/beta family, beta-barrel domain UP15_RS17285 PF00231 ATP synthase UP15_RS17290 PF00306 ATP synthase alpha/beta chain, C terminal domain UP15_RS17290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP15_RS17290 PF02874 ATP synthase alpha/beta family, beta-barrel domain UP15_RS17295 PF00213 ATP synthase delta (OSCP) subunit UP15_RS17300 PF00430 ATP synthase B/B' CF(0) UP15_RS17305 PF00137 ATP synthase subunit C UP15_RS17310 PF00119 ATP synthase A chain UP15_RS17315 PF03899 ATP synthase I chain UP15_RS17325 PF00464 Serine hydroxymethyltransferase UP15_RS17330 PF04260 Protein of unknown function (DUF436) UP15_RS17335 PF02502 Ribose/Galactose Isomerase UP15_RS17340 PF01451 Low molecular weight phosphotyrosine protein phosphatase UP15_RS17345 PF02659 Putative manganese efflux pump UP15_RS17350 PF03481 Putative GTP-binding controlling metal-binding UP15_RS17350 PF01300 Telomere recombination UP15_RS17360 PF09551 Stage II sporulation protein R (spore_II_R) UP15_RS17370 PF05175 Methyltransferase small domain UP15_RS17370 PF17827 PrmC N-terminal domain UP15_RS17375 PF03462 PCRF domain UP15_RS17375 PF00472 RF-1 domain UP15_RS17380 PF13411 MerR HTH family regulatory protein UP15_RS17385 PF03547 Membrane transport protein UP15_RS17390 PF00390 Malic enzyme, N-terminal domain UP15_RS17390 PF03949 Malic enzyme, NAD binding domain UP15_RS17395 PF00265 Thymidine kinase UP15_RS17400 PF01197 Ribosomal protein L31 UP15_RS17405 PF07498 Rho termination factor, N-terminal domain UP15_RS17405 PF07497 Rho termination factor, RNA-binding domain UP15_RS17405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP15_RS17410 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded UP15_RS17415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UP15_RS17420 PF00923 Transaldolase/Fructose-6-phosphate aldolase UP15_RS17425 PF01116 Fructose-bisphosphate aldolase class-II UP15_RS17430 PF00072 Response regulator receiver domain UP15_RS17435 PF10740 Domain of unknown function (DUF2529) UP15_RS17440 PF00117 Glutamine amidotransferase class-I UP15_RS17440 PF06418 CTP synthase N-terminus UP15_RS17445 PF05066 HB1, ASXL, restriction endonuclease HTH domain UP15_RS17455 PF00005 ABC transporter UP15_RS17485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP15_RS17485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP15_RS17485 PF02770 Acyl-CoA dehydrogenase, middle domain UP15_RS17490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP15_RS17490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP15_RS17490 PF02770 Acyl-CoA dehydrogenase, middle domain UP15_RS17495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UP15_RS17495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UP15_RS17500 PF02803 Thiolase, C-terminal domain UP15_RS17500 PF00108 Thiolase, N-terminal domain UP15_RS17505 PF13183 4Fe-4S dicluster domain UP15_RS17505 PF02754 Cysteine-rich domain UP15_RS17510 PF13091 PLD-like domain UP15_RS17515 PF03851 UV-endonuclease UvdE UP15_RS17525 PF02016 LD-carboxypeptidase N-terminal domain UP15_RS17525 PF17676 LD-carboxypeptidase C-terminal domain UP15_RS17535 PF00005 ABC transporter UP15_RS17535 PF00664 ABC transporter transmembrane region UP15_RS17540 PF13396 Phospholipase_D-nuclease N-terminal UP15_RS17540 PF13091 PLD-like domain UP15_RS17545 PF02016 LD-carboxypeptidase N-terminal domain UP15_RS17545 PF17676 LD-carboxypeptidase C-terminal domain UP15_RS17560 PF05746 DALR anticodon binding domain UP15_RS17560 PF00750 tRNA synthetases class I (R) UP15_RS17560 PF03485 Arginyl tRNA synthetase N terminal domain UP15_RS17565 PF09148 Domain of unknown function (DUF1934) UP15_RS17575 PF00491 Arginase family UP15_RS17580 PF17284 Spermidine synthase tetramerisation domain UP15_RS17585 PF00912 Transglycosylase UP15_RS17585 PF00905 Penicillin binding protein transpeptidase domain UP15_RS17590 PF08741 YwhD family UP15_RS17595 PF02163 Peptidase family M50 UP15_RS17600 PF01361 Tautomerase enzyme UP15_RS17610 PF00296 Luciferase-like monooxygenase UP15_RS17615 PF03466 LysR substrate binding domain UP15_RS17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS17620 PF03358 NADPH-dependent FMN reductase UP15_RS17625 PF00296 Luciferase-like monooxygenase UP15_RS17630 PF00462 Glutaredoxin UP15_RS17635 PF00583 Acetyltransferase (GNAT) family UP15_RS17640 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS17650 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS17655 PF00005 ABC transporter UP15_RS17665 PF01966 HD domain UP15_RS17670 PF07293 Protein of unknown function (DUF1450) UP15_RS17685 PF00535 Glycosyl transferase family 2 UP15_RS17685 PF07238 PilZ domain UP15_RS17695 PF03099 Biotin/lipoate A/B protein ligase family UP15_RS17720 PF14449 Pre-toxin TG UP15_RS17720 PF04740 LXG domain of WXG superfamily UP15_RS17760 PF03737 Aldolase/RraA UP15_RS17770 PF01515 Phosphate acetyl/butaryl transferase UP15_RS17775 PF06778 Chlorite dismutase UP15_RS17785 PF01037 Lrp/AsnC ligand binding domain UP15_RS17790 PF07690 Major Facilitator Superfamily UP15_RS17800 PF07883 Cupin domain UP15_RS17815 PF00155 Aminotransferase class I and II UP15_RS17825 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase UP15_RS17830 PF04321 RmlD substrate binding domain UP15_RS17835 PF16363 GDP-mannose 4,6 dehydratase UP15_RS17840 PF00483 Nucleotidyl transferase UP15_RS17845 PF04101 Glycosyltransferase family 28 C-terminal domain UP15_RS17850 PF02348 Cytidylyltransferase UP15_RS17855 PF03102 NeuB family UP15_RS17855 PF08666 SAF domain UP15_RS17860 PF00583 Acetyltransferase (GNAT) family UP15_RS17865 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UP15_RS17870 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase UP15_RS17875 PF00535 Glycosyl transferase family 2 UP15_RS17885 PF09671 Spore coat protein (Spore_GerQ) UP15_RS17895 PF04241 Protein of unknown function (DUF423) UP15_RS17900 PF00860 Permease family UP15_RS17905 PF17261 Family of unknown function (DUF5327) UP15_RS17910 PF00171 Aldehyde dehydrogenase family UP15_RS17915 PF03167 Uracil DNA glycosylase superfamily UP15_RS17920 PF00535 Glycosyl transferase family 2 UP15_RS17930 PF08543 Phosphomethylpyrimidine kinase UP15_RS17955 PF08244 Glycosyl hydrolases family 32 C terminal UP15_RS17955 PF00251 Glycosyl hydrolases family 32 N-terminal domain UP15_RS17960 PF00367 phosphotransferase system, EIIB UP15_RS17960 PF02378 Phosphotransferase system, EIIC UP15_RS17965 PF03123 CAT RNA binding domain UP15_RS17965 PF00874 PRD domain UP15_RS17975 PF00082 Subtilase family UP15_RS17975 PF05922 Peptidase inhibitor I9 UP15_RS17975 PF02225 PA domain UP15_RS17975 PF13860 FlgD Ig-like domain UP15_RS17985 PF00296 Luciferase-like monooxygenase UP15_RS17990 PF00881 Nitroreductase family UP15_RS17995 PF01098 Cell cycle protein UP15_RS18000 PF17368 Spore morphogenesis and germination YwcE UP15_RS18005 PF03626 Prokaryotic Cytochrome C oxidase subunit IV UP15_RS18010 PF00510 Cytochrome c oxidase subunit III UP15_RS18015 PF00115 Cytochrome C and Quinol oxidase polypeptide I UP15_RS18020 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UP15_RS18020 PF02790 Cytochrome C oxidase subunit II, transmembrane domain UP15_RS18030 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain UP15_RS18030 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain UP15_RS18035 PF16363 GDP-mannose 4,6 dehydratase UP15_RS18040 PF00288 GHMP kinases N terminal domain UP15_RS18040 PF08544 GHMP kinases C terminal UP15_RS18040 PF10509 Galactokinase galactose-binding signature UP15_RS18055 PF04138 GtrA-like protein UP15_RS18085 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS18085 PF13181 Tetratricopeptide repeat UP15_RS18105 PF04341 Protein of unknown function, DUF485 UP15_RS18110 PF00474 Sodium:solute symporter family UP15_RS18120 PF00665 Integrase core domain UP15_RS18120 PF13333 Integrase core domain UP15_RS18135 PF02581 Thiamine monophosphate synthase UP15_RS18140 PF02110 Hydroxyethylthiazole kinase family UP15_RS18145 PF03466 LysR substrate binding domain UP15_RS18145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS18150 PF03788 LrgA family UP15_RS18155 PF04172 LrgB-like family UP15_RS18160 PF10672 S-adenosylmethionine-dependent methyltransferase UP15_RS18160 PF17785 PUA-like domain UP15_RS18165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP15_RS18170 PF00005 ABC transporter UP15_RS18175 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS18180 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP15_RS18190 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS18195 PF04607 Region found in RelA / SpoT proteins UP15_RS18200 PF02653 Branched-chain amino acid transport system / permease component UP15_RS18205 PF00005 ABC transporter UP15_RS18210 PF13407 Periplasmic binding protein domain UP15_RS18215 PF13229 Right handed beta helix region UP15_RS18220 PF01063 Amino-transferase class IV UP15_RS18235 PF02056 Family 4 glycosyl hydrolase UP15_RS18235 PF11975 Family 4 glycosyl hydrolase C-terminal domain UP15_RS18240 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit UP15_RS18245 PF02378 Phosphotransferase system, EIIC UP15_RS18250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP15_RS18255 PF00874 PRD domain UP15_RS18255 PF05043 Mga helix-turn-helix domain UP15_RS18255 PF08279 HTH domain UP15_RS18255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP15_RS18270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP15_RS18270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP15_RS18285 PF04542 Sigma-70 region 2 UP15_RS18285 PF08281 Sigma-70, region 4 UP15_RS18290 PF00544 Pectate lyase UP15_RS18295 PF00664 ABC transporter transmembrane region UP15_RS18295 PF00005 ABC transporter UP15_RS18300 PF00005 ABC transporter UP15_RS18300 PF00664 ABC transporter transmembrane region UP15_RS18305 PF02322 Cytochrome bd terminal oxidase subunit II UP15_RS18310 PF01654 Cytochrome bd terminal oxidase subunit I UP15_RS18315 PF00005 ABC transporter UP15_RS18320 PF01032 FecCD transport family UP15_RS18325 PF01497 Periplasmic binding protein UP15_RS18330 PF04203 Sortase domain UP15_RS18335 PF00005 ABC transporter UP15_RS18340 PF01032 FecCD transport family UP15_RS18345 PF01497 Periplasmic binding protein UP15_RS18350 PF05031 Iron Transport-associated domain UP15_RS18355 PF05031 Iron Transport-associated domain UP15_RS18360 PF05031 Iron Transport-associated domain UP15_RS18365 PF01638 HxlR-like helix-turn-helix UP15_RS18370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP15_RS18375 PF00925 GTP cyclohydrolase II UP15_RS18375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UP15_RS18380 PF01872 RibD C-terminal domain UP15_RS18380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP15_RS18390 PF01522 Polysaccharide deacetylase UP15_RS18395 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit UP15_RS18400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP15_RS18405 PF00232 Glycosyl hydrolase family 1 UP15_RS18410 PF03786 D-mannonate dehydratase (UxuA) UP15_RS18415 PF02378 Phosphotransferase system, EIIC UP15_RS18420 PF05043 Mga helix-turn-helix domain UP15_RS18420 PF00874 PRD domain UP15_RS18420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP15_RS18420 PF08279 HTH domain UP15_RS18445 PF03553 Na+/H+ antiporter family UP15_RS18450 PF10415 Fumarase C C-terminus UP15_RS18450 PF00206 Lyase UP15_RS18455 PF17763 Glutaminase/Asparaginase C-terminal domain UP15_RS18455 PF00710 Asparaginase, N-terminal UP15_RS18460 PF01381 Helix-turn-helix UP15_RS18470 PF17353 Family of unknown function (DUF5381) UP15_RS18485 PF06013 Proteins of 100 residues with WXG UP15_RS18490 PF01546 Peptidase family M20/M25/M40 UP15_RS18490 PF07687 Peptidase dimerisation domain UP15_RS18505 PF01418 Helix-turn-helix domain, rpiR family UP15_RS18505 PF01380 SIS domain UP15_RS18510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UP15_RS18510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP15_RS18520 PF02447 GntP family permease UP15_RS18525 PF01717 Cobalamin-independent synthase, Catalytic domain UP15_RS18550 PF00232 Glycosyl hydrolase family 1 UP15_RS18555 PF00367 phosphotransferase system, EIIB UP15_RS18555 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP15_RS18555 PF02378 Phosphotransferase system, EIIC UP15_RS18560 PF03123 CAT RNA binding domain UP15_RS18560 PF00874 PRD domain UP15_RS18570 PF09234 Domain of unknown function (DUF1963) UP15_RS18580 PF02361 Cobalt transport protein UP15_RS18585 PF00005 ABC transporter UP15_RS18590 PF09819 ABC-type cobalt transport system, permease component UP15_RS18595 PF03070 TENA/THI-4/PQQC family UP15_RS18620 PF05547 Immune inhibitor A peptidase M6 UP15_RS18620 PF00801 PKD domain UP15_RS18625 PF03992 Antibiotic biosynthesis monooxygenase UP15_RS18630 PF00881 Nitroreductase family UP15_RS18635 PF01047 MarR family UP15_RS18640 PF00591 Glycosyl transferase family, a/b domain UP15_RS18640 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain UP15_RS18640 PF02885 Glycosyl transferase family, helical bundle domain UP15_RS18645 PF07662 Na+ dependent nucleoside transporter C-terminus UP15_RS18645 PF01773 Na+ dependent nucleoside transporter N-terminus UP15_RS18650 PF01791 DeoC/LacD family aldolase UP15_RS18655 PF04198 Putative sugar-binding domain UP15_RS18665 PF01757 Acyltransferase family UP15_RS18670 PF07690 Major Facilitator Superfamily UP15_RS18680 PF13649 Methyltransferase domain UP15_RS18685 PF00072 Response regulator receiver domain UP15_RS18685 PF00196 Bacterial regulatory proteins, luxR family UP15_RS18695 PF13411 MerR HTH family regulatory protein UP15_RS18700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP15_RS18705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP15_RS18710 PF00324 Amino acid permease UP15_RS18715 PF08713 DNA alkylation repair enzyme UP15_RS18720 PF02447 GntP family permease UP15_RS18725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UP15_RS18725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UP15_RS18730 PF01380 SIS domain UP15_RS18730 PF01418 Helix-turn-helix domain, rpiR family UP15_RS18735 PF01156 Inosine-uridine preferring nucleoside hydrolase UP15_RS18770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS18770 PF03466 LysR substrate binding domain UP15_RS18775 PF00356 Bacterial regulatory proteins, lacI family UP15_RS18780 PF13416 Bacterial extracellular solute-binding protein UP15_RS18785 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS18790 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS18795 PF07745 Glycosyl hydrolase family 53 UP15_RS18800 PF02449 Beta-galactosidase UP15_RS18800 PF08533 Beta-galactosidase C-terminal domain UP15_RS18800 PF08532 Beta-galactosidase trimerisation domain UP15_RS18820 PF00005 ABC transporter UP15_RS18835 PF03600 Citrate transporter UP15_RS18845 PF12679 ABC-2 family transporter protein UP15_RS18850 PF00005 ABC transporter UP15_RS18855 PF08274 PhnA Zinc-Ribbon UP15_RS18855 PF03831 PhnA domain UP15_RS18860 PF02595 Glycerate kinase family UP15_RS18865 PF02447 GntP family permease UP15_RS18870 PF13556 PucR C-terminal helix-turn-helix domain UP15_RS18870 PF17853 GGDEF-like domain UP15_RS18870 PF05651 Putative sugar diacid recognition UP15_RS18875 PF17922 Tetracyclin repressor-like, C-terminal domain UP15_RS18875 PF00440 Bacterial regulatory proteins, tetR family UP15_RS18880 PF07690 Major Facilitator Superfamily UP15_RS18890 PF00005 ABC transporter UP15_RS18900 PF18801 response regulator aspartate phosphatase H, N terminal UP15_RS18905 PF03123 CAT RNA binding domain UP15_RS18905 PF00874 PRD domain UP15_RS18910 PF00232 Glycosyl hydrolase family 1 UP15_RS18915 PF02378 Phosphotransferase system, EIIC UP15_RS18915 PF00367 phosphotransferase system, EIIB UP15_RS18915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP15_RS18940 PF00293 NUDIX domain UP15_RS18955 PF00324 Amino acid permease UP15_RS18960 PF00356 Bacterial regulatory proteins, lacI family UP15_RS18965 PF07690 Major Facilitator Superfamily UP15_RS18970 PF18317 Shikimate 5'-dehydrogenase C-terminal domain UP15_RS18970 PF08501 Shikimate dehydrogenase substrate binding domain UP15_RS18975 PF07690 Major Facilitator Superfamily UP15_RS18990 PF04740 LXG domain of WXG superfamily UP15_RS18990 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues UP15_RS18990 PF14449 Pre-toxin TG UP15_RS19000 PF00232 Glycosyl hydrolase family 1 UP15_RS19005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP15_RS19005 PF00367 phosphotransferase system, EIIB UP15_RS19005 PF02378 Phosphotransferase system, EIIC UP15_RS19010 PF00392 Bacterial regulatory proteins, gntR family UP15_RS19010 PF07702 UTRA domain UP15_RS19020 PF02567 Phenazine biosynthesis-like protein UP15_RS19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP15_RS19025 PF03466 LysR substrate binding domain UP15_RS19045 PF13545 Crp-like helix-turn-helix domain UP15_RS19045 PF00027 Cyclic nucleotide-binding domain UP15_RS19050 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS19050 PF00672 HAMP domain UP15_RS19050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS19055 PF00072 Response regulator receiver domain UP15_RS19055 PF00486 Transcriptional regulatory protein, C terminal UP15_RS19060 PF03176 MMPL family UP15_RS19060 PF12823 Domain of unknown function (DUF3817) UP15_RS19065 PF00753 Metallo-beta-lactamase superfamily UP15_RS19065 PF16123 Hydroxyacylglutathione hydrolase C-terminus UP15_RS19085 PF02590 Predicted SPOUT methyltransferase UP15_RS19090 PF02361 Cobalt transport protein UP15_RS19095 PF00005 ABC transporter UP15_RS19095 PF12558 ATP-binding cassette cobalt transporter UP15_RS19100 PF07155 ECF-type riboflavin transporter, S component UP15_RS19115 PF00005 ABC transporter UP15_RS19120 PF00583 Acetyltransferase (GNAT) family UP15_RS19125 PF13180 PDZ domain UP15_RS19130 PF00753 Metallo-beta-lactamase superfamily UP15_RS19135 PF09648 YycH protein UP15_RS19140 PF07435 YycH protein UP15_RS19145 PF00672 HAMP domain UP15_RS19145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP15_RS19145 PF13426 PAS domain UP15_RS19145 PF00512 His Kinase A (phospho-acceptor) domain UP15_RS19150 PF00486 Transcriptional regulatory protein, C terminal UP15_RS19150 PF00072 Response regulator receiver domain UP15_RS19175 PF00578 AhpC/TSA family UP15_RS19185 PF04235 Protein of unknown function (DUF418) UP15_RS19190 PF00709 Adenylosuccinate synthetase UP15_RS19195 PF00440 Bacterial regulatory proteins, tetR family UP15_RS19200 PF00067 Cytochrome P450 UP15_RS19205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP15_RS19210 PF00772 DnaB-like helicase N terminal domain UP15_RS19210 PF03796 DnaB-like helicase C terminal domain UP15_RS19215 PF16226 Domain of unknown function (DUF4885) UP15_RS19225 PF00756 Putative esterase UP15_RS19230 PF00106 short chain dehydrogenase UP15_RS19235 PF00425 chorismate binding enzyme UP15_RS19240 PF13193 AMP-binding enzyme C-terminal domain UP15_RS19240 PF00501 AMP-binding enzyme UP15_RS19245 PF00550 Phosphopantetheine attachment site UP15_RS19245 PF00857 Isochorismatase family UP15_RS19250 PF00975 Thioesterase domain UP15_RS19250 PF00668 Condensation domain UP15_RS19250 PF13193 AMP-binding enzyme C-terminal domain UP15_RS19250 PF00550 Phosphopantetheine attachment site UP15_RS19250 PF00501 AMP-binding enzyme UP15_RS19255 PF03621 MbtH-like protein UP15_RS19260 PF12833 Helix-turn-helix domain UP15_RS19260 PF01497 Periplasmic binding protein UP15_RS19265 PF01497 Periplasmic binding protein UP15_RS19270 PF00756 Putative esterase UP15_RS19275 PF07690 Major Facilitator Superfamily UP15_RS19280 PF01281 Ribosomal protein L9, N-terminal domain UP15_RS19280 PF03948 Ribosomal protein L9, C-terminal domain UP15_RS19285 PF02272 DHHA1 domain UP15_RS19285 PF01368 DHH family UP15_RS19290 PF09991 Predicted membrane protein (DUF2232) UP15_RS19295 PF01368 DHH family UP15_RS19295 PF02833 DHHA2 domain UP15_RS19300 PF13739 Deacetylase PdaC UP15_RS19300 PF11738 Protein of unknown function (DUF3298) UP15_RS19305 PF04542 Sigma-70 region 2 UP15_RS19305 PF08281 Sigma-70, region 4 UP15_RS19315 PF00199 Catalase UP15_RS19315 PF06628 Catalase-related immune-responsive UP15_RS19320 PF03358 NADPH-dependent FMN reductase UP15_RS19325 PF01738 Dienelactone hydrolase family UP15_RS19330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP15_RS19335 PF00528 Binding-protein-dependent transport system inner membrane component UP15_RS19340 PF00005 ABC transporter UP15_RS19340 PF00571 CBS domain UP15_RS19345 PF01084 Ribosomal protein S18 UP15_RS19350 PF00436 Single-strand binding protein family UP15_RS19355 PF01250 Ribosomal protein S6 UP15_RS19360 PF01926 50S ribosome-binding GTPase UP15_RS19360 PF06071 Protein of unknown function (DUF933) UP15_RS19365 PF06107 Bacterial protein of unknown function (DUF951) UP15_RS19385 PF06866 Protein of unknown function (DUF1256) UP15_RS19390 PF17762 HTH domain found in ParB protein UP15_RS19390 PF02195 ParB-like nuclease domain UP15_RS19395 PF13614 AAA domain UP15_RS19405 PF17762 HTH domain found in ParB protein UP15_RS19405 PF02195 ParB-like nuclease domain UP15_RS19410 PF02527 rRNA small subunit methyltransferase G UP15_RS19415 PF13932 GidA associated domain UP15_RS19415 PF01134 Glucose inhibited division protein A UP15_RS19420 PF12631 MnmE helical domain UP15_RS19420 PF10396 GTP-binding protein TrmE N-terminus UP15_RS19420 PF01926 50S ribosome-binding GTPase UP15_RS19425 PF14804 Jag N-terminus UP15_RS19425 PF01424 R3H domain UP15_RS19430 PF02096 60Kd inner membrane protein UP15_RS19435 PF00825 Ribonuclease P