UP12_RS00005 PF00308 Bacterial dnaA protein UP12_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix UP12_RS00005 PF11638 DnaA N-terminal domain UP12_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain UP12_RS00010 PF02767 DNA polymerase III beta subunit, central domain UP12_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain UP12_RS00015 PF13275 S4 domain UP12_RS00020 PF02463 RecF/RecN/SMC N terminal domain UP12_RS00025 PF04025 UP12_RS00025 UP12_RS00030 PF00204 DNA gyrase B UP12_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus UP12_RS00030 PF01751 Toprim domain UP12_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A UP12_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller UP12_RS00065 PF14175 UP12_RS00065 UP12_RS00070 PF00478 IMP dehydrogenase / GMP reductase domain UP12_RS00070 PF00571 CBS domain UP12_RS00075 PF00768 D-alanyl-D-alanine carboxypeptidase UP12_RS00075 PF07943 Penicillin-binding protein 5, C-terminal domain UP12_RS00080 PF00155 Aminotransferase class I and II UP12_RS00080 PF00392 Bacterial regulatory proteins, gntR family UP12_RS00085 PF01680 SOR/SNZ family UP12_RS00090 PF01174 SNO glutamine amidotransferase family UP12_RS00095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP12_RS00095 PF02403 Seryl-tRNA synthetase N-terminal domain UP12_RS00100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS00110 PF01712 Deoxynucleoside kinase UP12_RS00115 PF01712 Deoxynucleoside kinase UP12_RS00120 PF00704 Glycosyl hydrolases family 18 UP12_RS00120 PF01476 LysM domain UP12_RS00125 PF00857 Isochorismatase family UP12_RS00130 PF14437 UP12_RS00130 UP12_RS00140 PF12169 DNA polymerase III subunits gamma and tau domain III UP12_RS00140 PF13177 DNA polymerase III, delta subunit UP12_RS00145 PF02575 YbaB/EbfC DNA-binding family UP12_RS00150 PF02132 RecR protein UP12_RS00150 PF13662 Toprim domain UP12_RS00155 PF10704 UP12_RS00155 UP12_RS00160 PF07441 UP12_RS00160 UP12_RS00190 PF10764 UP12_RS00190 UP12_RS00195 PF10112 UP12_RS00195 UP12_RS00200 PF05816 UP12_RS00200 UP12_RS00205 PF01276 Orn/Lys/Arg decarboxylase, major domain UP12_RS00205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UP12_RS00210 PF02223 Thymidylate kinase UP12_RS00215 PF06153 Protein of unknown function (DUF970) UP12_RS00220 PF03885 Protein of unknown function (DUF327) UP12_RS00225 PF09115 DNA polymerase III, delta subunit, C terminal UP12_RS00225 PF13177 DNA polymerase III, delta subunit UP12_RS00230 PF04468 UP12_RS00230 UP12_RS00235 PF06156 UP12_RS00235 UP12_RS00240 PF05175 Methyltransferase small domain UP12_RS00245 PF01541 GIY-YIG catalytic domain UP12_RS00250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP12_RS00255 PF04014 Antidote-toxin recognition MazE UP12_RS00260 PF01588 Putative tRNA binding domain UP12_RS00260 PF08264 Anticodon-binding domain of tRNA UP12_RS00260 PF09334 tRNA synthetases class I (M) UP12_RS00265 PF01026 TatD related DNase UP12_RS00270 PF03990 UP12_RS00270 UP12_RS00270 PF06725 3D domain UP12_RS00270 PF07501 G5 domain UP12_RS00275 PF13331 UP12_RS00275 UP12_RS00275 PF13662 Toprim domain UP12_RS00280 PF00398 Ribosomal RNA adenine dimethylase UP12_RS00285 PF05582 UP12_RS00285 UP12_RS00290 PF06257 Protein of unknown function (DUF1021) UP12_RS00295 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP12_RS00300 PF00288 GHMP kinases N terminal domain UP12_RS00300 PF08544 GHMP kinases C terminal UP12_RS00305 PF00156 Phosphoribosyl transferase domain UP12_RS00305 PF09182 Bacterial purine repressor, N-terminal UP12_RS00310 PF01042 Endoribonuclease L-PSP UP12_RS00315 PF04026 SpoVG UP12_RS00320 PF00132 Bacterial transferase hexapeptide (six repeats) UP12_RS00320 PF00483 Nucleotidyl transferase UP12_RS00325 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UP12_RS00325 PF14572 Phosphoribosyl synthetase-associated domain UP12_RS00330 PF01386 Ribosomal L25p family UP12_RS00330 PF14693 Ribosomal protein TL5, C-terminal domain UP12_RS00335 PF01195 Peptidyl-tRNA hydrolase UP12_RS00340 PF10955 UP12_RS00340 UP12_RS00345 PF00270 DEAD/DEAH box helicase UP12_RS00345 PF00271 Helicase conserved C-terminal domain UP12_RS00345 PF02559 CarD-like/TRCF domain UP12_RS00345 PF03461 TRCF domain UP12_RS00350 PF04014 Antidote-toxin recognition MazE UP12_RS00350 PF15714 UP12_RS00350 UP12_RS00355 PF01943 UP12_RS00355 UP12_RS00355 PF14667 Polysaccharide biosynthesis C-terminal domain UP12_RS00360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP12_RS00360 PF03819 MazG nucleotide pyrophosphohydrolase domain UP12_RS00365 PF01479 S4 domain UP12_RS00370 PF07873 YabP family UP12_RS00375 PF09578 UP12_RS00375 UP12_RS00380 PF04977 Septum formation initiator UP12_RS00385 PF00575 S1 RNA binding domain UP12_RS00400 PF07228 Stage II sporulation protein E (SpoIIE) UP12_RS00405 PF00092 von Willebrand factor type A domain UP12_RS00405 PF13519 von Willebrand factor type A domain UP12_RS00410 PF00069 Protein kinase domain UP12_RS00415 PF01171 PP-loop family UP12_RS00415 PF11734 TilS substrate C-terminal domain UP12_RS00420 PF00156 Phosphoribosyl transferase domain UP12_RS00425 PF00004 ATPase family associated with various cellular activities (AAA) UP12_RS00425 PF01434 Peptidase family M41 UP12_RS00425 PF06480 FtsH Extracellular UP12_RS00430 PF03309 Type III pantothenate kinase UP12_RS00435 PF01430 Hsp33 protein UP12_RS00440 PF13145 PPIC-type PPIASE domain UP12_RS00440 PF13624 SurA N-terminal domain UP12_RS00445 PF00291 Pyridoxal-phosphate dependent enzyme UP12_RS00450 PF00425 chorismate binding enzyme UP12_RS00450 PF04715 Anthranilate synthase component I, N terminal region UP12_RS00455 PF00117 Glutamine amidotransferase class-I UP12_RS00460 PF01063 Aminotransferase class IV UP12_RS00465 PF00809 Pterin binding enzyme UP12_RS00470 PF02152 Dihydroneopterin aldolase UP12_RS00475 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) UP12_RS00480 PF01381 Helix-turn-helix UP12_RS00485 PF01207 Dihydrouridine synthase (Dus) UP12_RS00490 PF00152 tRNA synthetases class II (D, K and N) UP12_RS00490 PF01336 OB-fold nucleic acid binding domain UP12_RS00570 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) UP12_RS00575 PF02151 UvrB/uvrC motif UP12_RS00580 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain UP12_RS00585 PF00004 ATPase family associated with various cellular activities (AAA) UP12_RS00585 PF02151 UvrB/uvrC motif UP12_RS00585 PF02861 Clp amino terminal domain UP12_RS00585 PF07724 AAA domain (Cdc48 subfamily) UP12_RS00585 PF10431 C-terminal, D2-small domain, of ClpB protein UP12_RS00590 PF13481 AAA domain UP12_RS00590 PF13541 Subunit ChlI of Mg-chelatase UP12_RS00595 PF02457 DisA bacterial checkpoint controller nucleotide-binding UP12_RS00595 PF10635 DisA bacterial checkpoint controller linker region UP12_RS00605 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UP12_RS00610 PF02542 YgbB family UP12_RS00615 PF00749 tRNA synthetases class I (E and Q), catalytic domain UP12_RS00620 PF00132 Bacterial transferase hexapeptide (six repeats) UP12_RS00620 PF06426 Serine acetyltransferase, N-terminal UP12_RS00625 PF01406 tRNA synthetases class I (C) catalytic domain UP12_RS00625 PF09190 DALR domain UP12_RS00630 PF00636 Ribonuclease III domain UP12_RS00635 PF00588 SpoU rRNA Methylase family UP12_RS00635 PF08032 RNA 2'-O ribose methyltransferase substrate binding UP12_RS00640 PF05991 UP12_RS00640 UP12_RS00645 PF04542 Sigma-70 region 2 UP12_RS00645 PF08281 Sigma-70, region 4 UP12_RS00650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex UP12_RS00655 PF00467 KOW motif UP12_RS00655 PF02357 Transcription termination factor nusG UP12_RS00660 PF00298 Ribosomal protein L11, RNA binding domain UP12_RS00660 PF03946 Ribosomal protein L11, N-terminal domain UP12_RS00665 PF00687 Ribosomal protein L1p/L10e family UP12_RS00670 PF00466 Ribosomal protein L10 UP12_RS00675 PF00542 Ribosomal protein L7/L12 C-terminal domain UP12_RS00675 PF16320 UP12_RS00675 UP12_RS00680 PF05175 Methyltransferase small domain UP12_RS00685 PF00562 RNA polymerase Rpb2, domain 6 UP12_RS00685 PF04560 RNA polymerase Rpb2, domain 7 UP12_RS00685 PF04561 RNA polymerase Rpb2, domain 2 UP12_RS00685 PF04563 RNA polymerase beta subunit UP12_RS00685 PF04565 RNA polymerase Rpb2, domain 3 UP12_RS00685 PF10385 RNA polymerase beta subunit external 1 domain UP12_RS00690 PF00623 RNA polymerase Rpb1, domain 2 UP12_RS00690 PF04983 RNA polymerase Rpb1, domain 3 UP12_RS00690 PF04997 RNA polymerase Rpb1, domain 1 UP12_RS00690 PF04998 RNA polymerase Rpb1, domain 5 UP12_RS00690 PF05000 RNA polymerase Rpb1, domain 4 UP12_RS00695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family UP12_RS00700 PF00164 Ribosomal protein S12/S23 UP12_RS00705 PF00177 Ribosomal protein S7p/S5e UP12_RS00710 PF00009 Elongation factor Tu GTP binding domain UP12_RS00710 PF00679 Elongation factor G C-terminus UP12_RS00710 PF03144 Elongation factor Tu domain 2 UP12_RS00710 PF03764 Elongation factor G, domain IV UP12_RS00710 PF14492 Elongation Factor G, domain II UP12_RS00715 PF00009 Elongation factor Tu GTP binding domain UP12_RS00715 PF03143 Elongation factor Tu C-terminal domain UP12_RS00715 PF03144 Elongation factor Tu domain 2 UP12_RS00720 PF00561 alpha/beta hydrolase fold UP12_RS00725 PF00338 Ribosomal protein S10p/S20e UP12_RS00730 PF00297 Ribosomal protein L3 UP12_RS00735 PF00573 Ribosomal protein L4/L1 family UP12_RS00740 PF00276 Ribosomal protein L23 UP12_RS00745 PF00181 Ribosomal Proteins L2, RNA binding domain UP12_RS00745 PF03947 Ribosomal Proteins L2, C-terminal domain UP12_RS00750 PF00203 Ribosomal protein S19 UP12_RS00755 PF00237 Ribosomal protein L22p/L17e UP12_RS00760 PF00189 Ribosomal protein S3, C-terminal domain UP12_RS00760 PF07650 KH domain UP12_RS00765 PF00252 Ribosomal protein L16p/L10e UP12_RS00770 PF00831 Ribosomal L29 protein UP12_RS00775 PF00366 Ribosomal protein S17 UP12_RS00780 PF00238 Ribosomal protein L14p/L23e UP12_RS00785 PF00467 KOW motif UP12_RS00785 PF17136 UP12_RS00785 UP12_RS00790 PF00281 Ribosomal protein L5 UP12_RS00790 PF00673 ribosomal L5P family C-terminus UP12_RS00795 PF00253 Ribosomal protein S14p/S29e UP12_RS00800 PF00410 Ribosomal protein S8 UP12_RS00805 PF00347 Ribosomal protein L6 UP12_RS00810 PF00861 Ribosomal L18p/L5e family UP12_RS00815 PF00333 Ribosomal protein S5, N-terminal domain UP12_RS00815 PF03719 Ribosomal protein S5, C-terminal domain UP12_RS00820 PF00327 Ribosomal protein L30p/L7e UP12_RS00825 PF00828 Ribosomal protein L18e/L15 UP12_RS00830 PF00344 SecY translocase UP12_RS00835 PF00406 Adenylate kinase UP12_RS00835 PF05191 Adenylate kinase, active site lid UP12_RS00840 PF00557 Metallopeptidase family M24 UP12_RS00850 PF01176 Translation initiation factor 1A / IF-1 UP12_RS00855 PF00444 Ribosomal protein L36 UP12_RS00860 PF00416 Ribosomal protein S13/S18 UP12_RS00865 PF00411 Ribosomal protein S11 UP12_RS00870 PF01000 RNA polymerase Rpb3/RpoA insert domain UP12_RS00870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain UP12_RS00870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain UP12_RS00875 PF01196 Ribosomal protein L17 UP12_RS00880 PF00005 ABC transporter UP12_RS00885 PF00005 ABC transporter UP12_RS00890 PF02361 Cobalt transport protein UP12_RS00895 PF01416 tRNA pseudouridine synthase UP12_RS00900 PF00572 Ribosomal protein L13 UP12_RS00905 PF00380 Ribosomal protein S9/S16 UP12_RS00910 PF13302 Acetyltransferase (GNAT) domain UP12_RS00915 PF04909 Amidohydrolase UP12_RS00920 PF00583 Acetyltransferase (GNAT) family UP12_RS00925 PF13354 Beta-lactamase enzyme family UP12_RS00930 PF16107 UP12_RS00930 UP12_RS00935 PF10730 UP12_RS00935 UP12_RS00940 PF01520 N-acetylmuramoyl-L-alanine amidase UP12_RS00945 PF10609 ParA/MinD ATPase like UP12_RS00955 PF14089 UP12_RS00955 UP12_RS00960 PF01522 Polysaccharide deacetylase UP12_RS00990 PF00916 UP12_RS00990 UP12_RS00990 PF01740 STAS domain UP12_RS00995 PF01758 Sodium Bile acid symporter family UP12_RS01000 PF07075 Protein of unknown function (DUF1343) UP12_RS01005 PF00933 Glycosyl hydrolase family 3 N terminal domain UP12_RS01005 PF01915 Glycosyl hydrolase family 3 C-terminal domain UP12_RS01010 PF00144 Beta-lactamase UP12_RS01015 PF00367 phosphotransferase system, EIIB UP12_RS01015 PF02378 Phosphotransferase system, EIIC UP12_RS01020 PF01380 SIS domain UP12_RS01020 PF01418 Helix-turn-helix domain, rpiR family UP12_RS01025 PF13580 SIS domain UP12_RS01055 PF00491 Arginase family UP12_RS01060 PF04542 Sigma-70 region 2 UP12_RS01060 PF08281 Sigma-70, region 4 UP12_RS01065 PF13490 Putative zinc-finger UP12_RS01070 PF02457 DisA bacterial checkpoint controller nucleotide-binding UP12_RS01075 PF07949 YbbR-like protein UP12_RS01080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UP12_RS01080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UP12_RS01080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UP12_RS01080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UP12_RS01085 PF01380 SIS domain UP12_RS01085 PF13522 Glutamine amidotransferase domain UP12_RS01120 PF09966 Uncharacterized protein conserved in bacteria (DUF2200) UP12_RS01125 PF13396 UP12_RS01125 UP12_RS01130 PF00005 ABC transporter UP12_RS01135 PF12679 UP12_RS01135 UP12_RS01140 PF01042 Endoribonuclease L-PSP UP12_RS01145 PF00005 ABC transporter UP12_RS01160 PF13098 Thioredoxin-like domain UP12_RS01170 PF04235 UP12_RS01170 UP12_RS01175 PF00392 Bacterial regulatory proteins, gntR family UP12_RS01180 PF00005 ABC transporter UP12_RS01185 PF13346 UP12_RS01185 UP12_RS01190 PF01381 Helix-turn-helix UP12_RS01200 PF12697 Alpha/beta hydrolase family UP12_RS01205 PF00440 Bacterial regulatory proteins, tetR family UP12_RS01215 PF13349 UP12_RS01215 UP12_RS01220 PF00324 Amino acid permease UP12_RS01225 PF03009 Glycerophosphoryl diester phosphodiesterase family UP12_RS01230 PF07690 Major Facilitator Superfamily UP12_RS01235 PF13624 SurA N-terminal domain UP12_RS01240 PF03190 Protein of unknown function, DUF255 UP12_RS01240 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) UP12_RS01250 PF00440 Bacterial regulatory proteins, tetR family UP12_RS01250 PF16925 UP12_RS01250 UP12_RS01255 PF00106 short chain dehydrogenase UP12_RS01260 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS01260 PF13602 Zinc-binding dehydrogenase UP12_RS01265 PF00109 Beta-ketoacyl synthase, N-terminal domain UP12_RS01265 PF02801 Beta-ketoacyl synthase, C-terminal domain UP12_RS01270 PF13560 Helix-turn-helix domain UP12_RS01280 PF02583 Metal-sensitive transcriptional repressor UP12_RS01285 PF13686 DsrE/DsrF/DrsH-like family UP12_RS01290 PF00581 Rhodanese-like domain UP12_RS01295 PF00581 Rhodanese-like domain UP12_RS01295 PF01206 Sulfurtransferase TusA UP12_RS01300 PF00581 Rhodanese-like domain UP12_RS01300 PF00753 Metallo-beta-lactamase superfamily UP12_RS01305 PF01206 Sulfurtransferase TusA UP12_RS01310 PF01925 UP12_RS01310 UP12_RS01315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP12_RS01315 PF03129 Anticodon binding domain UP12_RS01315 PF09180 Prolyl-tRNA synthetase, C-terminal UP12_RS01320 PF07690 Major Facilitator Superfamily UP12_RS01325 PF13673 Acetyltransferase (GNAT) domain UP12_RS01330 PF01047 MarR family UP12_RS01340 PF04463 UP12_RS01340 UP12_RS01350 PF00248 Aldo/keto reductase family UP12_RS01355 PF00465 Iron-containing alcohol dehydrogenase UP12_RS01360 PF00581 Rhodanese-like domain UP12_RS01360 PF12368 UP12_RS01360 UP12_RS01365 PF13520 Amino acid permease UP12_RS01375 PF00874 PRD domain UP12_RS01375 PF03123 CAT RNA binding domain UP12_RS01380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP12_RS01380 PF00367 phosphotransferase system, EIIB UP12_RS01380 PF02378 Phosphotransferase system, EIIC UP12_RS01385 PF00232 Glycosyl hydrolase family 1 UP12_RS01400 PF12120 Rifampin ADP-ribosyl transferase UP12_RS01405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP12_RS01405 PF00874 PRD domain UP12_RS01405 PF05043 Mga helix-turn-helix domain UP12_RS01405 PF08279 HTH domain UP12_RS01410 PF00480 ROK family UP12_RS01415 PF01074 Glycosyl hydrolases family 38 N-terminal domain UP12_RS01415 PF07748 Glycosyl hydrolases family 38 C-terminal domain UP12_RS01415 PF09261 Alpha mannosidase, middle domain UP12_RS01420 PF02378 Phosphotransferase system, EIIC UP12_RS01425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS01430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP12_RS01435 PF00082 Subtilase family UP12_RS01450 PF00324 Amino acid permease UP12_RS01455 PF02574 Homocysteine S-methyltransferase UP12_RS01460 PF02588 UP12_RS01460 UP12_RS01460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP12_RS01465 PF03551 Transcriptional regulator PadR-like family UP12_RS01470 PF08006 UP12_RS01470 UP12_RS01475 PF07690 Major Facilitator Superfamily UP12_RS01480 PF00583 Acetyltransferase (GNAT) family UP12_RS01490 PF04167 Protein of unknown function (DUF402) UP12_RS01495 PF00082 Subtilase family UP12_RS01500 PF01425 Amidase UP12_RS01505 PF00440 Bacterial regulatory proteins, tetR family UP12_RS01510 PF07883 Cupin domain UP12_RS01515 PF00107 Zinc-binding dehydrogenase UP12_RS01515 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS01515 PF13823 Alcohol dehydrogenase GroES-associated UP12_RS01520 PF01047 MarR family UP12_RS01525 PF00501 AMP-binding enzyme UP12_RS01525 PF13193 AMP-binding enzyme C-terminal domain UP12_RS01530 PF13520 Amino acid permease UP12_RS01535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS01540 PF00561 alpha/beta hydrolase fold UP12_RS01545 PF01235 UP12_RS01545 UP12_RS01550 PF04960 Glutaminase UP12_RS01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS01560 PF00072 Response regulator receiver domain UP12_RS01560 PF08664 UP12_RS01560 UP12_RS01565 PF02810 SEC-C motif UP12_RS01565 PF05225 helix-turn-helix, Psq domain UP12_RS01575 PF00248 Aldo/keto reductase family UP12_RS01580 PF14501 GHKL domain UP12_RS01585 PF00072 Response regulator receiver domain UP12_RS01585 PF04397 LytTr DNA-binding domain UP12_RS01590 PF00005 ABC transporter UP12_RS01595 PF12679 UP12_RS01595 UP12_RS01605 PF11611 Domain of unknown function (DUF4352) UP12_RS01605 PF17118 UP12_RS01605 UP12_RS01610 PF07486 Cell Wall Hydrolase UP12_RS01615 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS01620 PF01757 UP12_RS01620 UP12_RS01625 PF00296 Luciferase-like monooxygenase UP12_RS01630 PF02342 TerD domain UP12_RS01635 PF02342 TerD domain UP12_RS01640 PF02342 TerD domain UP12_RS01645 PF03741 UP12_RS01645 UP12_RS01650 PF15617 UP12_RS01650 UP12_RS01655 PF12500 UP12_RS01655 UP12_RS01655 PF15609 UP12_RS01655 UP12_RS01660 PF11202 UP12_RS01660 UP12_RS01660 PF15608 UP12_RS01660 UP12_RS01665 PF05116 Sucrose-6F-phosphate phosphohydrolase UP12_RS01670 PF14266 UP12_RS01670 UP12_RS01675 PF05816 UP12_RS01675 UP12_RS01680 PF00005 ABC transporter UP12_RS01685 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS01690 PF04069 Substrate binding domain of ABC-type glycine betaine transport system UP12_RS01695 PF12697 Alpha/beta hydrolase family UP12_RS01700 PF00106 short chain dehydrogenase UP12_RS01705 PF01546 Peptidase family M20/M25/M40 UP12_RS01705 PF07687 Peptidase dimerisation domain UP12_RS01710 PF03606 UP12_RS01710 UP12_RS01715 PF00056 lactate/malate dehydrogenase, NAD binding domain UP12_RS01715 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UP12_RS01720 PF02652 UP12_RS01720 UP12_RS01725 PF00356 Bacterial regulatory proteins, lacI family UP12_RS01725 PF13377 Periplasmic binding protein-like domain UP12_RS01730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UP12_RS01735 PF05116 Sucrose-6F-phosphate phosphohydrolase UP12_RS01740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP12_RS01740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UP12_RS01745 PF07690 Major Facilitator Superfamily UP12_RS01750 PF01810 UP12_RS01750 UP12_RS01755 PF17094 UP12_RS01755 UP12_RS01760 PF08892 UP12_RS01760 UP12_RS01765 PF00324 Amino acid permease UP12_RS01770 PF09347 Domain of unknown function (DUF1989) UP12_RS01775 PF02540 NAD synthase UP12_RS01805 PF00285 Citrate synthase UP12_RS01810 PF00171 Aldehyde dehydrogenase family UP12_RS01815 PF01487 Type I 3-dehydroquinase UP12_RS01820 PF00205 Thiamine pyrophosphate enzyme, central domain UP12_RS01820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP12_RS01820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP12_RS01825 PF07883 Cupin domain UP12_RS01830 PF02515 CoA-transferase family III UP12_RS01835 PF07690 Major Facilitator Superfamily UP12_RS01845 PF01614 Bacterial transcriptional regulator UP12_RS01845 PF09339 IclR helix-turn-helix domain UP12_RS01850 PF01202 Shikimate kinase UP12_RS01855 PF00701 Dihydrodipicolinate synthetase family UP12_RS01860 PF00356 Bacterial regulatory proteins, lacI family UP12_RS01860 PF13377 Periplasmic binding protein-like domain UP12_RS01865 PF00083 Sugar (and other) transporter UP12_RS01870 PF08241 Methyltransferase domain UP12_RS01875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS01875 PF03466 LysR substrate binding domain UP12_RS01880 PF00795 Carbon-nitrogen hydrolase UP12_RS01885 PF05448 Acetyl xylan esterase (AXE1) UP12_RS01895 PF10127 UP12_RS01895 UP12_RS01900 PF01619 Proline dehydrogenase UP12_RS01905 PF00171 Aldehyde dehydrogenase family UP12_RS01910 PF13556 PucR C-terminal helix-turn-helix domain UP12_RS01915 PF02040 UP12_RS01915 UP12_RS01920 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS01925 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP12_RS01930 PF10925 UP12_RS01930 UP12_RS01935 PF13483 Beta-lactamase superfamily domain UP12_RS01940 PF01037 AsnC family UP12_RS01940 PF13412 Winged helix-turn-helix DNA-binding UP12_RS01945 PF02522 Aminoglycoside 3-N-acetyltransferase UP12_RS01950 PF11033 Competence protein J (ComJ) UP12_RS01955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS01955 PF00672 HAMP domain UP12_RS01955 PF17202 UP12_RS01955 UP12_RS01960 PF14040 UP12_RS01960 UP12_RS01970 PF01968 Hydantoinase/oxoprolinase UP12_RS01970 PF05378 UP12_RS01970 UP12_RS01975 PF02538 UP12_RS01975 UP12_RS01980 PF13416 Bacterial extracellular solute-binding protein UP12_RS01985 PF00005 ABC transporter UP12_RS01985 PF08402 TOBE domain UP12_RS01990 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS01995 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS02000 PF00501 AMP-binding enzyme UP12_RS02000 PF00550 Phosphopantetheine attachment site UP12_RS02000 PF00668 Condensation domain UP12_RS02000 PF13193 AMP-binding enzyme C-terminal domain UP12_RS02000 PF13745 HxxPF-repeated domain UP12_RS02005 PF00501 AMP-binding enzyme UP12_RS02005 PF00550 Phosphopantetheine attachment site UP12_RS02005 PF00668 Condensation domain UP12_RS02005 PF13193 AMP-binding enzyme C-terminal domain UP12_RS02005 PF13745 HxxPF-repeated domain UP12_RS02010 PF00501 AMP-binding enzyme UP12_RS02010 PF00550 Phosphopantetheine attachment site UP12_RS02010 PF00668 Condensation domain UP12_RS02010 PF00975 Thioesterase domain UP12_RS02010 PF13193 AMP-binding enzyme C-terminal domain UP12_RS02015 PF00501 AMP-binding enzyme UP12_RS02015 PF00550 Phosphopantetheine attachment site UP12_RS02015 PF00668 Condensation domain UP12_RS02015 PF08659 KR domain UP12_RS02015 PF13193 AMP-binding enzyme C-terminal domain UP12_RS02015 PF13745 HxxPF-repeated domain UP12_RS02020 PF00501 AMP-binding enzyme UP12_RS02020 PF00550 Phosphopantetheine attachment site UP12_RS02020 PF00668 Condensation domain UP12_RS02020 PF00975 Thioesterase domain UP12_RS02020 PF08659 KR domain UP12_RS02020 PF13193 AMP-binding enzyme C-terminal domain UP12_RS02020 PF13745 HxxPF-repeated domain UP12_RS02025 PF00975 Thioesterase domain UP12_RS02030 PF00892 EamA-like transporter family UP12_RS02035 PF00155 Aminotransferase class I and II UP12_RS02035 PF00392 Bacterial regulatory proteins, gntR family UP12_RS02040 PF01648 4'-phosphopantetheinyl transferase superfamily UP12_RS02050 PF02588 UP12_RS02050 UP12_RS02055 PF01345 UP12_RS02055 UP12_RS02060 PF04203 Sortase family UP12_RS02070 PF00005 ABC transporter UP12_RS02075 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS02080 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP12_RS02085 PF00324 Amino acid permease UP12_RS02090 PF00854 POT family UP12_RS02095 PF12708 Pectate lyase superfamily protein UP12_RS02095 PF13229 Right handed beta helix region UP12_RS02100 PF00296 Luciferase-like monooxygenase UP12_RS02105 PF00583 Acetyltransferase (GNAT) family UP12_RS02110 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP12_RS02115 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS02120 PF00005 ABC transporter UP12_RS02125 PF01546 Peptidase family M20/M25/M40 UP12_RS02125 PF07687 Peptidase dimerisation domain UP12_RS02130 PF03972 MmgE/PrpD family UP12_RS02135 PF13185 GAF domain UP12_RS02140 PF00696 Amino acid kinase family UP12_RS02145 PF07690 Major Facilitator Superfamily UP12_RS02150 PF00440 Bacterial regulatory proteins, tetR family UP12_RS02160 PF12840 Helix-turn-helix domain UP12_RS02165 PF00155 Aminotransferase class I and II UP12_RS02165 PF00392 Bacterial regulatory proteins, gntR family UP12_RS02170 PF00202 Aminotransferase class-III UP12_RS02175 PF13520 Amino acid permease UP12_RS02180 PF00171 Aldehyde dehydrogenase family UP12_RS02185 PF02525 Flavodoxin-like fold UP12_RS02190 PF07987 Domain of unkown function (DUF1775) UP12_RS02195 PF04234 CopC domain UP12_RS02195 PF05425 UP12_RS02195 UP12_RS02200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS02200 PF02378 Phosphotransferase system, EIIC UP12_RS02205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP12_RS02210 PF01232 Mannitol dehydrogenase Rossmann domain UP12_RS02210 PF08125 Mannitol dehydrogenase C-terminal domain UP12_RS02215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS02215 PF00672 HAMP domain UP12_RS02215 PF17200 UP12_RS02215 UP12_RS02220 PF01042 Endoribonuclease L-PSP UP12_RS02225 PF10852 UP12_RS02225 UP12_RS02235 PF12681 Glyoxalase-like domain UP12_RS02240 PF05901 UP12_RS02240 UP12_RS02245 PF08282 haloacid dehalogenase-like hydrolase UP12_RS02250 PF03746 LamB/YcsF family UP12_RS02255 PF01566 UP12_RS02255 UP12_RS02260 PF07286 Protein of unknown function (DUF1445) UP12_RS02265 PF02682 Allophanate hydrolase subunit 1 UP12_RS02270 PF02626 Allophanate hydrolase subunit 2 UP12_RS02275 PF01614 Bacterial transcriptional regulator UP12_RS02275 PF09339 IclR helix-turn-helix domain UP12_RS02280 PF02525 Flavodoxin-like fold UP12_RS02285 PF13472 GDSL-like Lipase/Acylhydrolase family UP12_RS02290 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase UP12_RS02295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP12_RS02295 PF00874 PRD domain UP12_RS02295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS02295 PF05043 Mga helix-turn-helix domain UP12_RS02295 PF08279 HTH domain UP12_RS02300 PF13649 Methyltransferase domain UP12_RS02305 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS02310 PF16242 UP12_RS02310 UP12_RS02330 PF12823 UP12_RS02330 UP12_RS02335 PF00392 Bacterial regulatory proteins, gntR family UP12_RS02335 PF07729 FCD domain UP12_RS02340 PF02311 AraC-like ligand binding domain UP12_RS02340 PF12833 Helix-turn-helix domain UP12_RS02345 PF00892 EamA-like transporter family UP12_RS02350 PF00180 Isocitrate/isopropylmalate dehydrogenase UP12_RS02355 PF01131 DNA topoisomerase UP12_RS02355 PF01751 Toprim domain UP12_RS02360 PF01270 Glycosyl hydrolases family 8 UP12_RS02365 PF00990 GGDEF domain UP12_RS02370 PF10096 UP12_RS02370 UP12_RS02375 PF13641 Glycosyltransferase like family 2 UP12_RS02380 PF03170 Bacterial cellulose synthase subunit UP12_RS02385 PF13520 Amino acid permease UP12_RS02390 PF00205 Thiamine pyrophosphate enzyme, central domain UP12_RS02390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP12_RS02390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP12_RS02395 PF04740 UP12_RS02395 UP12_RS02395 PF14449 UP12_RS02395 UP12_RS02400 PF10004 UP12_RS02400 UP12_RS02415 PF13302 Acetyltransferase (GNAT) domain UP12_RS02420 PF01566 UP12_RS02420 UP12_RS02425 PF04226 UP12_RS02425 UP12_RS02430 PF12787 UP12_RS02430 UP12_RS02435 PF03480 Bacterial extracellular solute-binding protein, family 7 UP12_RS02440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS02440 PF13426 PAS domain UP12_RS02440 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP12_RS02440 PF17203 UP12_RS02440 UP12_RS02445 PF00072 Response regulator receiver domain UP12_RS02450 PF00375 Sodium:dicarboxylate symporter family UP12_RS02455 PF01594 UP12_RS02455 UP12_RS02460 PF00375 Sodium:dicarboxylate symporter family UP12_RS02465 PF00005 ABC transporter UP12_RS02470 PF12730 UP12_RS02470 UP12_RS02480 PF00085 Thioredoxin UP12_RS02485 PF01820 D-ala D-ala ligase N-terminus UP12_RS02485 PF07478 D-ala D-ala ligase C-terminus UP12_RS02490 PF01225 Mur ligase family, catalytic domain UP12_RS02490 PF02875 Mur ligase family, glutamate ligase domain UP12_RS02490 PF08245 Mur ligase middle domain UP12_RS02495 PF12146 Putative lysophospholipase UP12_RS02505 PF00270 DEAD/DEAH box helicase UP12_RS02505 PF00271 Helicase conserved C-terminal domain UP12_RS02510 PF03703 UP12_RS02510 UP12_RS02515 PF03703 UP12_RS02515 UP12_RS02520 PF01694 Rhomboid family UP12_RS02525 PF01648 4'-phosphopantetheinyl transferase superfamily UP12_RS02530 PF14285 UP12_RS02530 UP12_RS02535 PF00842 Alanine racemase, C-terminal domain UP12_RS02535 PF01168 Alanine racemase, N-terminal domain UP12_RS02545 PF02452 PemK-like protein UP12_RS02550 PF01740 STAS domain UP12_RS02550 PF08678 Rsbr N terminal UP12_RS02555 PF01740 STAS domain UP12_RS02560 PF13581 Histidine kinase-like ATPase domain UP12_RS02565 PF07228 Stage II sporulation protein E (SpoIIE) UP12_RS02565 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain UP12_RS02570 PF13466 STAS domain UP12_RS02575 PF13581 Histidine kinase-like ATPase domain UP12_RS02580 PF04539 Sigma-70 region 3 UP12_RS02580 PF04542 Sigma-70 region 2 UP12_RS02580 PF04545 Sigma-70, region 4 UP12_RS02585 PF07228 Stage II sporulation protein E (SpoIIE) UP12_RS02590 PF00575 S1 RNA binding domain UP12_RS02590 PF09371 Tex-like protein N-terminal domain UP12_RS02590 PF12836 Helix-hairpin-helix motif UP12_RS02590 PF16921 UP12_RS02590 UP12_RS02595 PF10263 UP12_RS02595 UP12_RS02600 PF00676 Dehydrogenase E1 component UP12_RS02605 PF02779 Transketolase, pyrimidine binding domain UP12_RS02605 PF02780 Transketolase, C-terminal domain UP12_RS02610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP12_RS02610 PF00364 Biotin-requiring enzyme UP12_RS02610 PF02817 e3 binding domain UP12_RS02615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP12_RS02615 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS02620 PF00158 Sigma-54 interaction domain UP12_RS02620 PF02954 Bacterial regulatory protein, Fis family UP12_RS02660 PF00589 Phage integrase family UP12_RS02660 PF14657 UP12_RS02660 UP12_RS02660 PF14659 Phage integrase, N-terminal SAM-like domain UP12_RS02665 PF06114 Domain of unknown function (DUF955) UP12_RS02670 PF01381 Helix-turn-helix UP12_RS02690 PF06125 Bacterial protein of unknown function (DUF961) UP12_RS02705 PF02486 UP12_RS02705 UP12_RS02750 PF00437 Type II/IV secretion system protein UP12_RS02770 PF12642 Conjugative transposon protein TcpC UP12_RS02780 PF03125 UP12_RS02780 UP12_RS02780 PF12648 UP12_RS02780 UP12_RS02785 PF12846 AAA-like domain UP12_RS02795 PF00877 NlpC/P60 family UP12_RS02795 PF13702 Lysozyme-like UP12_RS02810 PF13424 Tetratricopeptide repeat UP12_RS02815 PF14280 UP12_RS02815 UP12_RS02820 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS02820 PF13602 Zinc-binding dehydrogenase UP12_RS02825 PF01638 HxlR-like helix-turn-helix UP12_RS02830 PF12146 Putative lysophospholipase UP12_RS02835 PF10049 UP12_RS02835 UP12_RS02845 PF00082 Subtilase family UP12_RS02850 PF00313 'Cold-shock' DNA-binding domain UP12_RS02855 PF02559 CarD-like/TRCF domain UP12_RS02860 PF00107 Zinc-binding dehydrogenase UP12_RS02860 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS02865 PF13411 MerR HTH family regulatory protein UP12_RS02870 PF00722 Glycosyl hydrolases family 16 UP12_RS02875 PF00440 Bacterial regulatory proteins, tetR family UP12_RS02880 PF07690 Major Facilitator Superfamily UP12_RS02885 PF07859 alpha/beta hydrolase fold UP12_RS02900 PF07252 Protein of unknown function (DUF1433) UP12_RS02905 PF00106 short chain dehydrogenase UP12_RS02910 PF13411 MerR HTH family regulatory protein UP12_RS02915 PF12146 Putative lysophospholipase UP12_RS02925 PF00710 Asparaginase UP12_RS02930 PF00561 alpha/beta hydrolase fold UP12_RS02935 PF12802 MarR family UP12_RS02940 PF00440 Bacterial regulatory proteins, tetR family UP12_RS02940 PF08360 QacR-like protein, C-terminal region UP12_RS02945 PF07690 Major Facilitator Superfamily UP12_RS02950 PF01757 UP12_RS02950 UP12_RS02955 PF03176 MMPL family UP12_RS02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS02960 PF07730 Histidine kinase UP12_RS02965 PF00072 Response regulator receiver domain UP12_RS02965 PF00196 Bacterial regulatory proteins, luxR family UP12_RS02975 PF00583 Acetyltransferase (GNAT) family UP12_RS02980 PF14150 UP12_RS02980 UP12_RS02985 PF13302 Acetyltransferase (GNAT) domain UP12_RS02990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS02995 PF00583 Acetyltransferase (GNAT) family UP12_RS03000 PF14278 UP12_RS03000 UP12_RS03005 PF01872 RibD C-terminal domain UP12_RS03010 PF01047 MarR family UP12_RS03015 PF00881 Nitroreductase family UP12_RS03020 PF00296 Luciferase-like monooxygenase UP12_RS03030 PF01381 Helix-turn-helix UP12_RS03030 PF07883 Cupin domain UP12_RS03035 PF01810 UP12_RS03035 UP12_RS03040 PF13420 Acetyltransferase (GNAT) domain UP12_RS03045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS03045 PF03466 LysR substrate binding domain UP12_RS03050 PF00248 Aldo/keto reductase family UP12_RS03055 PF05532 CsbD-like UP12_RS03060 PF01596 O-methyltransferase UP12_RS03065 PF05437 UP12_RS03065 UP12_RS03070 PF03591 UP12_RS03070 UP12_RS03075 PF00892 EamA-like transporter family UP12_RS03080 PF02016 LD-carboxypeptidase UP12_RS03085 PF00375 Sodium:dicarboxylate symporter family UP12_RS03125 PF00586 AIR synthase related protein, N-terminal domain UP12_RS03125 PF02769 AIR synthase related protein, C-terminal domain UP12_RS03130 PF02367 Uncharacterised P-loop hydrolase UPF0079 UP12_RS03135 PF00814 Glycoprotease family UP12_RS03140 PF00583 Acetyltransferase (GNAT) family UP12_RS03145 PF00814 Glycoprotease family UP12_RS03150 PF00005 ABC transporter UP12_RS03150 PF12848 ABC transporter UP12_RS03150 PF16326 UP12_RS03150 UP12_RS03155 PF01967 MoaC family UP12_RS03160 PF02629 CoA binding domain UP12_RS03160 PF06971 Putative DNA-binding protein N-terminus UP12_RS03165 PF02416 mttA/Hcf106 family UP12_RS03170 PF00902 Sec-independent protein translocase protein (TatC) UP12_RS03175 PF00293 NUDIX domain UP12_RS03180 PF14146 UP12_RS03180 UP12_RS03185 PF02517 CAAX protease self-immunity UP12_RS03190 PF00166 Chaperonin 10 Kd subunit UP12_RS03195 PF00118 TCP-1/cpn60 chaperonin family UP12_RS03200 PF01047 MarR family UP12_RS03205 PF00583 Acetyltransferase (GNAT) family UP12_RS03210 PF04299 Putative FMN-binding domain UP12_RS03230 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel UP12_RS03240 PF02627 Carboxymuconolactone decarboxylase family UP12_RS03245 PF00394 Multicopper oxidase UP12_RS03245 PF07731 Multicopper oxidase UP12_RS03245 PF07732 Multicopper oxidase UP12_RS03250 PF00324 Amino acid permease UP12_RS03255 PF01545 Cation efflux family UP12_RS03255 PF16916 UP12_RS03255 UP12_RS03260 PF07726 ATPase family associated with various cellular activities (AAA) UP12_RS03265 PF01882 UP12_RS03265 UP12_RS03270 PF01841 Transglutaminase-like superfamily UP12_RS03270 PF13559 UP12_RS03270 UP12_RS03275 PF00117 Glutamine amidotransferase class-I UP12_RS03275 PF00958 GMP synthase C terminal domain UP12_RS03275 PF02540 NAD synthase UP12_RS03285 PF02517 CAAX protease self-immunity UP12_RS03295 PF04397 LytTr DNA-binding domain UP12_RS03300 PF10881 UP12_RS03300 UP12_RS03300 PF13086 AAA domain UP12_RS03300 PF13087 AAA domain UP12_RS03305 PF13302 Acetyltransferase (GNAT) domain UP12_RS03310 PF07690 Major Facilitator Superfamily UP12_RS03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS03315 PF03466 LysR substrate binding domain UP12_RS03320 PF00860 Permease family UP12_RS03330 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP12_RS03335 PF14044 UP12_RS03335 UP12_RS03340 PF00731 AIR carboxylase UP12_RS03345 PF02222 ATP-grasp domain UP12_RS03350 PF00206 Lyase UP12_RS03350 PF10397 Adenylosuccinate lyase C-terminus UP12_RS03355 PF01259 SAICAR synthetase UP12_RS03360 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase UP12_RS03365 PF13507 CobB/CobQ-like glutamine amidotransferase domain UP12_RS03370 PF00586 AIR synthase related protein, N-terminal domain UP12_RS03370 PF02769 AIR synthase related protein, C-terminal domain UP12_RS03375 PF00156 Phosphoribosyl transferase domain UP12_RS03375 PF13522 Glutamine amidotransferase domain UP12_RS03380 PF00586 AIR synthase related protein, N-terminal domain UP12_RS03380 PF02769 AIR synthase related protein, C-terminal domain UP12_RS03385 PF00551 Formyl transferase UP12_RS03390 PF01808 AICARFT/IMPCHase bienzyme UP12_RS03390 PF02142 MGS-like domain UP12_RS03395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain UP12_RS03395 PF02843 Phosphoribosylglycinamide synthetase, C domain UP12_RS03395 PF02844 Phosphoribosylglycinamide synthetase, N domain UP12_RS03405 PF13527 Acetyltransferase (GNAT) domain UP12_RS03410 PF07905 UP12_RS03410 UP12_RS03410 PF13556 PucR C-terminal helix-turn-helix domain UP12_RS03415 PF00202 Aminotransferase class-III UP12_RS03420 PF01144 Coenzyme A transferase UP12_RS03425 PF01144 Coenzyme A transferase UP12_RS03430 PF01546 Peptidase family M20/M25/M40 UP12_RS03430 PF07687 Peptidase dimerisation domain UP12_RS03435 PF11127 Protein of unknown function (DUF2892) UP12_RS03440 PF01979 Amidohydrolase family UP12_RS03440 PF13382 Adenine deaminase C-terminal domain UP12_RS03445 PF01371 Trp repressor protein UP12_RS03450 PF13079 UP12_RS03450 UP12_RS03455 PF01645 Conserved region in glutamate synthase UP12_RS03465 PF10049 UP12_RS03465 UP12_RS03470 PF01884 PcrB family UP12_RS03475 PF00580 UvrD/REP helicase N-terminal domain UP12_RS03475 PF13361 UvrD-like helicase C-terminal domain UP12_RS03480 PF00533 BRCA1 C Terminus (BRCT) domain UP12_RS03480 PF01653 NAD-dependent DNA ligase adenylation domain UP12_RS03480 PF03119 NAD-dependent DNA ligase C4 zinc finger domain UP12_RS03480 PF03120 NAD-dependent DNA ligase OB-fold domain UP12_RS03480 PF12826 Helix-hairpin-helix motif UP12_RS03480 PF14520 Helix-hairpin-helix domain UP12_RS03485 PF07537 CamS sex pheromone cAM373 precursor UP12_RS03490 PF07690 Major Facilitator Superfamily UP12_RS03495 PF00501 AMP-binding enzyme UP12_RS03495 PF00550 Phosphopantetheine attachment site UP12_RS03495 PF00668 Condensation domain UP12_RS03495 PF13193 AMP-binding enzyme C-terminal domain UP12_RS03495 PF13745 HxxPF-repeated domain UP12_RS03500 PF00144 Beta-lactamase UP12_RS03505 PF13529 Peptidase_C39 like family UP12_RS03510 PF00975 Thioesterase domain UP12_RS03515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UP12_RS03515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UP12_RS03520 PF13419 Haloacid dehalogenase-like hydrolase UP12_RS03525 PF00550 Phosphopantetheine attachment site UP12_RS03530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP12_RS03530 PF02770 Acyl-CoA dehydrogenase, middle domain UP12_RS03530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP12_RS03535 PF00109 Beta-ketoacyl synthase, N-terminal domain UP12_RS03535 PF00501 AMP-binding enzyme UP12_RS03535 PF00550 Phosphopantetheine attachment site UP12_RS03535 PF00668 Condensation domain UP12_RS03535 PF00698 Acyl transferase domain UP12_RS03535 PF02801 Beta-ketoacyl synthase, C-terminal domain UP12_RS03535 PF08659 KR domain UP12_RS03535 PF13193 AMP-binding enzyme C-terminal domain UP12_RS03535 PF13745 HxxPF-repeated domain UP12_RS03535 PF16197 UP12_RS03535 UP12_RS03540 PF00501 AMP-binding enzyme UP12_RS03540 PF00550 Phosphopantetheine attachment site UP12_RS03540 PF00668 Condensation domain UP12_RS03545 PF00109 Beta-ketoacyl synthase, N-terminal domain UP12_RS03545 PF00550 Phosphopantetheine attachment site UP12_RS03545 PF00698 Acyl transferase domain UP12_RS03545 PF02801 Beta-ketoacyl synthase, C-terminal domain UP12_RS03545 PF08659 KR domain UP12_RS03545 PF16197 UP12_RS03545 UP12_RS03550 PF00109 Beta-ketoacyl synthase, N-terminal domain UP12_RS03550 PF00550 Phosphopantetheine attachment site UP12_RS03550 PF00698 Acyl transferase domain UP12_RS03550 PF02801 Beta-ketoacyl synthase, C-terminal domain UP12_RS03550 PF08659 KR domain UP12_RS03550 PF16197 UP12_RS03550 UP12_RS03555 PF00109 Beta-ketoacyl synthase, N-terminal domain UP12_RS03555 PF00550 Phosphopantetheine attachment site UP12_RS03555 PF00668 Condensation domain UP12_RS03555 PF00698 Acyl transferase domain UP12_RS03555 PF02801 Beta-ketoacyl synthase, C-terminal domain UP12_RS03555 PF13745 HxxPF-repeated domain UP12_RS03555 PF16197 UP12_RS03555 UP12_RS03560 PF01636 Phosphotransferase enzyme family UP12_RS03565 PF00245 Alkaline phosphatase UP12_RS03570 PF02308 UP12_RS03570 UP12_RS03575 PF00474 Sodium:solute symporter family UP12_RS03580 PF02686 Glu-tRNAGln amidotransferase C subunit UP12_RS03585 PF01425 Amidase UP12_RS03590 PF02637 GatB domain UP12_RS03590 PF02934 GatB/GatE catalytic domain UP12_RS03595 PF00440 Bacterial regulatory proteins, tetR family UP12_RS03600 PF00873 AcrB/AcrD/AcrF family UP12_RS03605 PF01156 Inosine-uridine preferring nucleoside hydrolase UP12_RS03610 PF00781 Diacylglycerol kinase catalytic domain UP12_RS03615 PF01938 TRAM domain UP12_RS03615 PF05958 tRNA (Uracil-5-)-methyltransferase UP12_RS03630 PF04740 UP12_RS03630 UP12_RS03630 PF14449 UP12_RS03630 UP12_RS03630 PF15542 UP12_RS03630 UP12_RS03635 PF01207 Dihydrouridine synthase (Dus) UP12_RS03640 PF14568 SMI1-KNR4 cell-wall UP12_RS03645 PF01380 SIS domain UP12_RS03645 PF01418 Helix-turn-helix domain, rpiR family UP12_RS03650 PF00367 phosphotransferase system, EIIB UP12_RS03650 PF02378 Phosphotransferase system, EIIC UP12_RS03655 PF02056 Family 4 glycosyl hydrolase UP12_RS03655 PF11975 Family 4 glycosyl hydrolase C-terminal domain UP12_RS03665 PF02082 Transcriptional regulator UP12_RS03670 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS03680 PF13021 UP12_RS03680 UP12_RS03685 PF02056 Family 4 glycosyl hydrolase UP12_RS03685 PF11975 Family 4 glycosyl hydrolase C-terminal domain UP12_RS03690 PF01380 SIS domain UP12_RS03690 PF01418 Helix-turn-helix domain, rpiR family UP12_RS03695 PF05977 Transmembrane secretion effector UP12_RS03700 PF04073 Aminoacyl-tRNA editing domain UP12_RS03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS03705 PF03466 LysR substrate binding domain UP12_RS03710 PF07690 Major Facilitator Superfamily UP12_RS03715 PF13037 UP12_RS03715 UP12_RS03715 PF13039 UP12_RS03715 UP12_RS03720 PF00483 Nucleotidyl transferase UP12_RS03725 PF16363 UP12_RS03725 UP12_RS03730 PF03407 UP12_RS03730 UP12_RS03735 PF00535 Glycosyl transferase family 2 UP12_RS03740 PF03407 UP12_RS03740 UP12_RS03745 PF07690 Major Facilitator Superfamily UP12_RS03750 PF00905 Penicillin binding protein transpeptidase domain UP12_RS03750 PF03717 Penicillin-binding Protein dimerisation domain UP12_RS03750 PF05223 NTF2-like N-terminal transpeptidase domain UP12_RS03755 PF00939 Sodium:sulfate symporter transmembrane region UP12_RS03770 PF00011 Hsp20/alpha crystallin family UP12_RS03785 PF13520 Amino acid permease UP12_RS03790 PF00535 Glycosyl transferase family 2 UP12_RS03795 PF00005 ABC transporter UP12_RS03795 PF12848 ABC transporter UP12_RS03795 PF16326 UP12_RS03795 UP12_RS03800 PF13411 MerR HTH family regulatory protein UP12_RS03805 PF07690 Major Facilitator Superfamily UP12_RS03810 PF00005 ABC transporter UP12_RS03810 PF12848 ABC transporter UP12_RS03815 PF00270 DEAD/DEAH box helicase UP12_RS03815 PF00271 Helicase conserved C-terminal domain UP12_RS03820 PF00107 Zinc-binding dehydrogenase UP12_RS03820 PF16884 UP12_RS03820 UP12_RS03825 PF11486 Protein of unknown function (DUF3212) UP12_RS03830 PF11181 UP12_RS03830 UP12_RS03835 PF13489 Methyltransferase domain UP12_RS03840 PF00925 GTP cyclohydrolase II UP12_RS03845 PF03781 Sulfatase-modifying factor enzyme 1 UP12_RS03850 PF00400 WD domain, G-beta repeat UP12_RS03855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP12_RS03855 PF01872 RibD C-terminal domain UP12_RS03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS03865 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP12_RS03865 PF17203 UP12_RS03865 UP12_RS03870 PF00072 Response regulator receiver domain UP12_RS03870 PF08279 HTH domain UP12_RS03875 PF03401 Tripartite tricarboxylate transporter family receptor UP12_RS03880 PF03600 Citrate transporter UP12_RS03885 PF00246 Zinc carboxypeptidase UP12_RS03890 PF05870 Phenolic acid decarboxylase (PAD) UP12_RS03895 PF03551 Transcriptional regulator PadR-like family UP12_RS03895 PF10400 Virulence activator alpha C-term UP12_RS03900 PF02898 Nitric oxide synthase, oxygenase domain UP12_RS03905 PF00708 Acylphosphatase UP12_RS03910 PF03473 MOSC domain UP12_RS03910 PF03475 3-alpha domain UP12_RS03915 PF00557 Metallopeptidase family M24 UP12_RS03920 PF00367 phosphotransferase system, EIIB UP12_RS03920 PF02378 Phosphotransferase system, EIIC UP12_RS03925 PF05675 UP12_RS03925 UP12_RS03930 PF07681 UP12_RS03930 UP12_RS03935 PF14172 UP12_RS03935 UP12_RS03940 PF00884 Sulfatase UP12_RS03945 PF00282 Pyridoxal-dependent decarboxylase conserved domain UP12_RS03950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS03950 PF00672 HAMP domain UP12_RS03955 PF09350 UP12_RS03955 UP12_RS03960 PF00367 phosphotransferase system, EIIB UP12_RS03960 PF02378 Phosphotransferase system, EIIC UP12_RS03965 PF00128 Alpha amylase, catalytic domain UP12_RS03965 PF16657 UP12_RS03965 UP12_RS03970 PF00392 Bacterial regulatory proteins, gntR family UP12_RS03970 PF07702 UTRA domain UP12_RS03980 PF00149 Calcineurin-like phosphoesterase UP12_RS03980 PF02872 5'-nucleotidase, C-terminal domain UP12_RS03985 PF01965 DJ-1/PfpI family UP12_RS03990 PF06569 UP12_RS03990 UP12_RS03995 PF01235 UP12_RS03995 UP12_RS04000 PF01451 Low molecular weight phosphotyrosine protein phosphatase UP12_RS04010 PF03631 UP12_RS04010 UP12_RS04015 PF07690 Major Facilitator Superfamily UP12_RS04020 PF02566 OsmC-like protein UP12_RS04025 PF01699 Sodium/calcium exchanger protein UP12_RS04030 PF14167 UP12_RS04030 UP12_RS04035 PF01709 Transcriptional regulator UP12_RS04045 PF00924 Mechanosensitive ion channel UP12_RS04050 PF04055 Radical SAM superfamily UP12_RS04050 PF08756 UP12_RS04050 UP12_RS04050 PF13353 4Fe-4S single cluster domain UP12_RS04060 PF01522 Polysaccharide deacetylase UP12_RS04070 PF01544 CorA-like Mg2+ transporter protein UP12_RS04080 PF00730 HhH-GPD superfamily base excision DNA repair protein UP12_RS04085 PF01938 TRAM domain UP12_RS04085 PF05958 tRNA (Uracil-5-)-methyltransferase UP12_RS04090 PF00440 Bacterial regulatory proteins, tetR family UP12_RS04090 PF16925 UP12_RS04090 UP12_RS04095 PF07993 Male sterility protein UP12_RS04095 PF12697 Alpha/beta hydrolase family UP12_RS04110 PF06445 GyrI-like small molecule binding domain UP12_RS04110 PF13411 MerR HTH family regulatory protein UP12_RS04115 PF07690 Major Facilitator Superfamily UP12_RS04120 PF08713 DNA alkylation repair enzyme UP12_RS04125 PF08874 UP12_RS04125 UP12_RS04125 PF12395 UP12_RS04125 UP12_RS04130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP12_RS04130 PF02824 TGS domain UP12_RS04130 PF03129 Anticodon binding domain UP12_RS04130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UP12_RS04150 PF05043 Mga helix-turn-helix domain UP12_RS04155 PF00746 UP12_RS04155 UP12_RS04155 PF05737 Collagen binding domain UP12_RS04155 PF05738 Cna protein B-type domain UP12_RS04160 PF04203 Sortase family UP12_RS04170 PF00893 Small Multidrug Resistance protein UP12_RS04175 PF00893 Small Multidrug Resistance protein UP12_RS04180 PF00440 Bacterial regulatory proteins, tetR family UP12_RS04185 PF04892 UP12_RS04185 UP12_RS04195 PF13472 GDSL-like Lipase/Acylhydrolase family UP12_RS04200 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS04205 PF01497 Periplasmic binding protein UP12_RS04205 PF12833 Helix-turn-helix domain UP12_RS04210 PF01497 Periplasmic binding protein UP12_RS04215 PF00005 ABC transporter UP12_RS04215 PF00664 ABC transporter transmembrane region UP12_RS04220 PF02694 UP12_RS04220 UP12_RS04225 PF04542 Sigma-70 region 2 UP12_RS04225 PF08281 Sigma-70, region 4 UP12_RS04230 PF10099 UP12_RS04230 UP12_RS04230 PF13490 Putative zinc-finger UP12_RS04240 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS04240 PF13602 Zinc-binding dehydrogenase UP12_RS04245 PF12867 DinB superfamily UP12_RS04255 PF01047 MarR family UP12_RS04260 PF03706 UP12_RS04260 UP12_RS04260 PF09924 Uncharacterized conserved protein (DUF2156) UP12_RS04265 PF14595 Thioredoxin UP12_RS04270 PF04134 UP12_RS04270 UP12_RS04275 PF01381 Helix-turn-helix UP12_RS04285 PF00881 Nitroreductase family UP12_RS04290 PF14151 UP12_RS04290 UP12_RS04295 PF01370 NAD dependent epimerase/dehydratase family UP12_RS04295 PF08338 Domain of unknown function (DUF1731) UP12_RS04300 PF02631 RecX family UP12_RS04305 PF08838 Protein of unknown function (DUF1811) UP12_RS04310 PF08176 UP12_RS04310 UP12_RS04315 PF14043 UP12_RS04315 UP12_RS04320 PF00535 Glycosyl transferase family 2 UP12_RS04325 PF09586 UP12_RS04325 UP12_RS04330 PF01494 FAD binding domain UP12_RS04335 PF12867 DinB superfamily UP12_RS04340 PF14184 UP12_RS04340 UP12_RS04345 PF00190 Cupin UP12_RS04350 PF04545 Sigma-70, region 4 UP12_RS04355 PF12645 UP12_RS04355 UP12_RS04360 PF04307 UP12_RS04360 UP12_RS04365 PF00633 Helix-hairpin-helix motif UP12_RS04365 PF00730 HhH-GPD superfamily base excision DNA repair protein UP12_RS04365 PF14815 NUDIX domain UP12_RS04375 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS04380 PF04259 UP12_RS04380 UP12_RS04385 PF14182 UP12_RS04385 UP12_RS04390 PF04167 Protein of unknown function (DUF402) UP12_RS04395 PF00005 ABC transporter UP12_RS04395 PF00664 ABC transporter transmembrane region UP12_RS04400 PF00005 ABC transporter UP12_RS04400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP12_RS04405 PF00005 ABC transporter UP12_RS04405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP12_RS04410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP12_RS04415 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS04420 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS04420 PF12911 UP12_RS04420 UP12_RS04425 PF06081 UP12_RS04425 UP12_RS04430 PF00202 Aminotransferase class-III UP12_RS04435 PF00578 AhpC/TSA family UP12_RS04440 PF01475 Ferric uptake regulator family UP12_RS04445 PF11023 UP12_RS04445 UP12_RS04450 PF14540 Nucleotidyltransferase-like UP12_RS04555 PF01636 Phosphotransferase enzyme family UP12_RS04570 PF00300 Histidine phosphatase superfamily (branch 1) UP12_RS04585 PF09234 Domain of unknown function (DUF1963) UP12_RS04590 PF10020 UP12_RS04590 UP12_RS04595 PF00884 Sulfatase UP12_RS04600 PF00717 Peptidase S24-like UP12_RS04605 PF01053 Cys/Met metabolism PLP-dependent enzyme UP12_RS04615 PF00005 ABC transporter UP12_RS04625 PF05402 Coenzyme PQQ synthesis protein D (PqqD) UP12_RS04650 PF08331 UP12_RS04650 UP12_RS04650 PF13484 UP12_RS04650 UP12_RS04650 PF13646 HEAT repeats UP12_RS04655 PF12671 UP12_RS04655 UP12_RS04660 PF00588 SpoU rRNA Methylase family UP12_RS04665 PF15493 Domain of unknown function, YrpD UP12_RS04670 PF06798 UP12_RS04670 UP12_RS04670 PF08298 PrkA AAA domain UP12_RS04675 PF04285 UP12_RS04675 UP12_RS04680 PF13437 HlyD family secretion protein UP12_RS04685 PF07690 Major Facilitator Superfamily UP12_RS04690 PF03358 NADPH-dependent FMN reductase UP12_RS04700 PF00313 'Cold-shock' DNA-binding domain UP12_RS04705 PF00990 GGDEF domain UP12_RS04705 PF07694 5TMR of 5TMR-LYT UP12_RS04720 PF09580 UP12_RS04720 UP12_RS04730 PF07875 UP12_RS04730 UP12_RS04735 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS04735 PF01339 CheB methylesterase UP12_RS04735 PF01739 CheR methyltransferase, SAM binding domain UP12_RS04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS04735 PF08448 PAS fold UP12_RS04735 PF13426 PAS domain UP12_RS04735 PF13596 PAS domain UP12_RS04740 PF00149 Calcineurin-like phosphoesterase UP12_RS04740 PF00565 Staphylococcal nuclease homologue UP12_RS04740 PF02872 5'-nucleotidase, C-terminal domain UP12_RS04745 PF04203 Sortase family UP12_RS04750 PF00849 RNA pseudouridylate synthase UP12_RS04760 PF13419 Haloacid dehalogenase-like hydrolase UP12_RS04765 PF00583 Acetyltransferase (GNAT) family UP12_RS04765 PF00795 Carbon-nitrogen hydrolase UP12_RS04770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS04775 PF03547 UP12_RS04775 UP12_RS04780 PF07905 UP12_RS04780 UP12_RS04780 PF13556 PucR C-terminal helix-turn-helix domain UP12_RS04785 PF00202 Aminotransferase class-III UP12_RS04790 PF04309 Glycerol-3-phosphate responsive antiterminator UP12_RS04795 PF00230 Major intrinsic protein UP12_RS04800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UP12_RS04800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UP12_RS04805 PF01266 FAD dependent oxidoreductase UP12_RS04805 PF16901 UP12_RS04805 UP12_RS04810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UP12_RS04810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UP12_RS04810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UP12_RS04810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UP12_RS04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS04815 PF07730 Histidine kinase UP12_RS04815 PF13185 GAF domain UP12_RS04820 PF00072 Response regulator receiver domain UP12_RS04820 PF00196 Bacterial regulatory proteins, luxR family UP12_RS04825 PF13527 Acetyltransferase (GNAT) domain UP12_RS04830 PF14148 UP12_RS04830 UP12_RS04835 PF13028 Protein of unknown function (DUF3889) UP12_RS04840 PF00199 Catalase UP12_RS04840 PF06628 Catalase-related immune-responsive UP12_RS04845 PF02082 Transcriptional regulator UP12_RS04850 PF00042 Globin UP12_RS04850 PF00175 Oxidoreductase NAD-binding domain UP12_RS04850 PF00970 Oxidoreductase FAD-binding domain UP12_RS04855 PF04293 UP12_RS04855 UP12_RS04860 PF00245 Alkaline phosphatase UP12_RS04865 PF00877 NlpC/P60 family UP12_RS04865 PF01476 LysM domain UP12_RS04875 PF13791 UP12_RS04875 UP12_RS04875 PF13800 UP12_RS04875 UP12_RS04880 PF04542 Sigma-70 region 2 UP12_RS04880 PF08281 Sigma-70, region 4 UP12_RS04885 PF01553 Acyltransferase UP12_RS04890 PF00571 CBS domain UP12_RS04890 PF01595 UP12_RS04890 UP12_RS04890 PF03471 Transporter associated domain UP12_RS04895 PF13411 MerR HTH family regulatory protein UP12_RS04900 PF00571 CBS domain UP12_RS04900 PF01595 UP12_RS04900 UP12_RS04900 PF03471 Transporter associated domain UP12_RS04910 PF02537 UP12_RS04910 UP12_RS04915 PF02537 UP12_RS04915 UP12_RS04935 PF01522 Polysaccharide deacetylase UP12_RS04940 PF01063 Aminotransferase class IV UP12_RS04945 PF00582 Universal stress protein family UP12_RS04950 PF00005 ABC transporter UP12_RS04950 PF00664 ABC transporter transmembrane region UP12_RS04955 PF00005 ABC transporter UP12_RS04955 PF00664 ABC transporter transmembrane region UP12_RS04960 PF13460 NADH(P)-binding UP12_RS04965 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP12_RS04970 PF00005 ABC transporter UP12_RS04970 PF08402 TOBE domain UP12_RS04975 PF13556 PucR C-terminal helix-turn-helix domain UP12_RS04985 PF14398 UP12_RS04985 UP12_RS04995 PF04286 UP12_RS04995 UP12_RS05000 PF06133 Protein of unknown function (DUF964) UP12_RS05005 PF08282 haloacid dehalogenase-like hydrolase UP12_RS05010 PF04055 Radical SAM superfamily UP12_RS05015 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) UP12_RS05020 PF00999 Sodium/hydrogen exchanger family UP12_RS05025 PF02080 TrkA-C domain UP12_RS05035 PF00378 Enoyl-CoA hydratase/isomerase family UP12_RS05040 PF14120 UP12_RS05040 UP12_RS05045 PF00149 Calcineurin-like phosphoesterase UP12_RS05050 PF13514 AAA domain UP12_RS05055 PF01966 HD domain UP12_RS05060 PF14147 UP12_RS05060 UP12_RS05065 PF13616 PPIC-type PPIASE domain UP12_RS05070 PF09680 UP12_RS05070 UP12_RS05075 PF11667 UP12_RS05075 UP12_RS05080 PF08963 Protein of unknown function (DUF1878) UP12_RS05085 PF01047 MarR family UP12_RS05090 PF12732 UP12_RS05090 UP12_RS05100 PF17099 UP12_RS05100 UP12_RS05105 PF00266 Aminotransferase class-V UP12_RS05110 PF01230 HIT domain UP12_RS05115 PF00005 ABC transporter UP12_RS05120 PF05975 UP12_RS05120 UP12_RS05125 PF12787 UP12_RS05125 UP12_RS05130 PF01546 Peptidase family M20/M25/M40 UP12_RS05130 PF07687 Peptidase dimerisation domain UP12_RS05140 PF03992 Antibiotic biosynthesis monooxygenase UP12_RS05145 PF00905 Penicillin binding protein transpeptidase domain UP12_RS05145 PF00912 Transglycosylase UP12_RS05150 PF01208 Uroporphyrinogen decarboxylase (URO-D) UP12_RS05155 PF00762 Ferrochelatase UP12_RS05160 PF01593 Flavin containing amine oxidoreductase UP12_RS05165 PF00440 Bacterial regulatory proteins, tetR family UP12_RS05170 PF12698 ABC-2 family transporter protein UP12_RS05175 PF05343 M42 glutamyl aminopeptidase UP12_RS05180 PF00375 Sodium:dicarboxylate symporter family UP12_RS05185 PF12706 Beta-lactamase superfamily domain UP12_RS05190 PF03099 Biotin/lipoate A/B protein ligase family UP12_RS05190 PF10437 Bacterial lipoate protein ligase C-terminus UP12_RS05195 PF00501 AMP-binding enzyme UP12_RS05195 PF13193 AMP-binding enzyme C-terminal domain UP12_RS05205 PF01435 Peptidase family M48 UP12_RS05205 PF16491 UP12_RS05205 UP12_RS05210 PF00082 Subtilase family UP12_RS05210 PF05922 Peptidase inhibitor I9 UP12_RS05215 PF00300 Histidine phosphatase superfamily (branch 1) UP12_RS05220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS05220 PF11563 Protoglobin UP12_RS05225 PF00355 Rieske [2Fe-2S] domain UP12_RS05225 PF01266 FAD dependent oxidoreductase UP12_RS05230 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS05235 PF08858 IDEAL domain UP12_RS05240 PF06338 UP12_RS05240 UP12_RS05245 PF01168 Alanine racemase, N-terminal domain UP12_RS05245 PF14031 Putative serine dehydratase domain UP12_RS05255 PF00155 Aminotransferase class I and II UP12_RS05255 PF00392 Bacterial regulatory proteins, gntR family UP12_RS05260 PF07690 Major Facilitator Superfamily UP12_RS05265 PF01337 Barstar (barnase inhibitor) UP12_RS05270 PF03816 Cell envelope-related transcriptional attenuator domain UP12_RS05280 PF09335 UP12_RS05280 UP12_RS05285 PF00717 Peptidase S24-like UP12_RS05290 PF05145 UP12_RS05290 UP12_RS05295 PF03965 Penicillinase repressor UP12_RS05300 PF05569 BlaR1 peptidase M56 UP12_RS05305 PF07681 UP12_RS05305 UP12_RS05310 PF02915 Rubrerythrin UP12_RS05315 PF12705 PD-(D/E)XK nuclease superfamily UP12_RS05320 PF00580 UvrD/REP helicase N-terminal domain UP12_RS05320 PF12705 PD-(D/E)XK nuclease superfamily UP12_RS05320 PF13361 UvrD-like helicase C-terminal domain UP12_RS05325 PF00149 Calcineurin-like phosphoesterase UP12_RS05325 PF12320 Type 5 capsule protein repressor C-terminal domain UP12_RS05330 PF13555 P-loop containing region of AAA domain UP12_RS05330 PF13558 Putative exonuclease SbcCD, C subunit UP12_RS05340 PF10676 UP12_RS05340 UP12_RS05345 PF10970 UP12_RS05345 UP12_RS05355 PF10737 UP12_RS05355 UP12_RS05360 PF10803 UP12_RS05360 UP12_RS05365 PF10676 UP12_RS05365 UP12_RS05370 PF09388 Spo0E like sporulation regulatory protein UP12_RS05375 PF08757 UP12_RS05375 UP12_RS05385 PF01557 Fumarylacetoacetate (FAA) hydrolase family UP12_RS05390 PF07457 UP12_RS05390 UP12_RS05395 PF10949 UP12_RS05395 UP12_RS05400 PF00733 Asparagine synthase UP12_RS05400 PF13537 Glutamine amidotransferase domain UP12_RS05405 PF01593 Flavin containing amine oxidoreductase UP12_RS05410 PF01593 Flavin containing amine oxidoreductase UP12_RS05415 PF00494 Squalene/phytoene synthase UP12_RS05420 PF01554 MatE UP12_RS05425 PF02311 AraC-like ligand binding domain UP12_RS05425 PF12833 Helix-turn-helix domain UP12_RS05430 PF13302 Acetyltransferase (GNAT) domain UP12_RS05445 PF00132 Bacterial transferase hexapeptide (six repeats) UP12_RS05450 PF00202 Aminotransferase class-III UP12_RS05455 PF00282 Pyridoxal-dependent decarboxylase conserved domain UP12_RS05460 PF04183 IucA / IucC family UP12_RS05460 PF06276 Ferric iron reductase FhuF-like transporter UP12_RS05465 PF13523 Acetyltransferase (GNAT) domain UP12_RS05470 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) UP12_RS05475 PF04183 IucA / IucC family UP12_RS05475 PF06276 Ferric iron reductase FhuF-like transporter UP12_RS05480 PF13673 Acetyltransferase (GNAT) domain UP12_RS05485 PF00809 Pterin binding enzyme UP12_RS05485 PF02310 B12 binding domain UP12_RS05485 PF02574 Homocysteine S-methyltransferase UP12_RS05485 PF02607 B12 binding domain UP12_RS05485 PF02965 Vitamin B12 dependent methionine synthase, activation domain UP12_RS05490 PF02219 Methylenetetrahydrofolate reductase UP12_RS05490 PF02574 Homocysteine S-methyltransferase UP12_RS05495 PF04461 Protein of unknown function (DUF520) UP12_RS05500 PF13509 S1 domain UP12_RS05505 PF02608 Basic membrane protein UP12_RS05510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS05510 PF00672 HAMP domain UP12_RS05515 PF02645 Uncharacterised protein, DegV family COG1307 UP12_RS05520 PF02588 UP12_RS05520 UP12_RS05520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP12_RS05525 PF12690 Intracellular proteinase inhibitor UP12_RS05530 PF12758 UP12_RS05530 UP12_RS05540 PF08282 haloacid dehalogenase-like hydrolase UP12_RS05545 PF00326 Prolyl oligopeptidase family UP12_RS05550 PF01883 Domain of unknown function DUF59 UP12_RS05555 PF01565 FAD binding domain UP12_RS05555 PF04030 D-arabinono-1,4-lactone oxidase UP12_RS05560 PF07690 Major Facilitator Superfamily UP12_RS05565 PF01118 Semialdehyde dehydrogenase, NAD binding domain UP12_RS05565 PF02774 Semialdehyde dehydrogenase, dimerisation domain UP12_RS05570 PF01960 ArgJ family UP12_RS05575 PF00696 Amino acid kinase family UP12_RS05580 PF00202 Aminotransferase class-III UP12_RS05585 PF00117 Glutamine amidotransferase class-I UP12_RS05585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UP12_RS05590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP12_RS05590 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UP12_RS05595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UP12_RS05595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UP12_RS05600 PF14168 UP12_RS05600 UP12_RS05605 PF07690 Major Facilitator Superfamily UP12_RS05610 PF11151 UP12_RS05610 UP12_RS05625 PF02608 Basic membrane protein UP12_RS05630 PF10815 UP12_RS05630 UP12_RS05640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UP12_RS05640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UP12_RS05645 PF00109 Beta-ketoacyl synthase, N-terminal domain UP12_RS05645 PF02801 Beta-ketoacyl synthase, C-terminal domain UP12_RS05650 PF10026 UP12_RS05650 UP12_RS05655 PF00005 ABC transporter UP12_RS05655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP12_RS05660 PF00005 ABC transporter UP12_RS05660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP12_RS05665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP12_RS05670 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS05675 PF12911 UP12_RS05675 UP12_RS05680 PF12227 UP12_RS05680 UP12_RS05685 PF00579 tRNA synthetases class I (W and Y) UP12_RS05690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP12_RS05695 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS05700 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS05700 PF12911 UP12_RS05700 UP12_RS05705 PF00005 ABC transporter UP12_RS05705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP12_RS05710 PF00005 ABC transporter UP12_RS05710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP12_RS05720 PF13508 Acetyltransferase (GNAT) domain UP12_RS05725 PF03960 ArsC family UP12_RS05730 PF03741 UP12_RS05730 UP12_RS05735 PF05389 Negative regulator of genetic competence (MecA) UP12_RS05740 PF13091 PLD-like domain UP12_RS05740 PF13396 UP12_RS05740 UP12_RS05745 PF06054 UP12_RS05745 UP12_RS05750 PF01432 Peptidase family M3 UP12_RS05750 PF08439 Oligopeptidase F UP12_RS05755 PF13743 Thioredoxin UP12_RS05760 PF01152 Bacterial-like globin UP12_RS05765 PF01464 Transglycosylase SLT domain UP12_RS05770 PF01928 CYTH domain UP12_RS05780 PF04607 Region found in RelA / SpoT proteins UP12_RS05785 PF01513 ATP-NAD kinase UP12_RS05790 PF00849 RNA pseudouridylate synthase UP12_RS05795 PF00149 Calcineurin-like phosphoesterase UP12_RS05800 PF00999 Sodium/hydrogen exchanger family UP12_RS05800 PF02080 TrkA-C domain UP12_RS05800 PF02254 TrkA-N domain UP12_RS05805 PF03070 TENA/THI-4/PQQC family UP12_RS05810 PF02581 Thiamine monophosphate synthase/TENI UP12_RS05815 PF01266 FAD dependent oxidoreductase UP12_RS05820 PF02597 ThiS family UP12_RS05825 PF05690 Thiazole biosynthesis protein ThiG UP12_RS05830 PF00899 ThiF family UP12_RS05835 PF08543 Phosphomethylpyrimidine kinase UP12_RS05840 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS05845 PF14153 UP12_RS05845 UP12_RS05850 PF10612 UP12_RS05850 UP12_RS05855 PF10612 UP12_RS05855 UP12_RS05860 PF07552 UP12_RS05860 UP12_RS05870 PF07552 UP12_RS05870 UP12_RS05875 PF07098 UP12_RS05875 UP12_RS05885 PF09680 UP12_RS05885 UP12_RS05890 PF14069 UP12_RS05890 UP12_RS05895 PF00580 UvrD/REP helicase N-terminal domain UP12_RS05895 PF13361 UvrD-like helicase C-terminal domain UP12_RS05905 PF13673 Acetyltransferase (GNAT) domain UP12_RS05910 PF13563 2'-5' RNA ligase superfamily UP12_RS05915 PF00756 Putative esterase UP12_RS05920 PF01053 Cys/Met metabolism PLP-dependent enzyme UP12_RS05925 PF01053 Cys/Met metabolism PLP-dependent enzyme UP12_RS05935 PF00107 Zinc-binding dehydrogenase UP12_RS05935 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS05940 PF01047 MarR family UP12_RS05945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UP12_RS05950 PF01047 MarR family UP12_RS05955 PF00669 Bacterial flagellin N-terminal helical region UP12_RS05955 PF00700 Bacterial flagellin C-terminal helical region UP12_RS05965 PF07690 Major Facilitator Superfamily UP12_RS05970 PF00701 Dihydrodipicolinate synthetase family UP12_RS05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS05975 PF03466 LysR substrate binding domain UP12_RS05980 PF03629 Domain of unknown function (DUF303) UP12_RS05985 PF00302 Chloramphenicol acetyltransferase UP12_RS05990 PF13181 Tetratricopeptide repeat UP12_RS05990 PF13424 Tetratricopeptide repeat UP12_RS06000 PF14568 SMI1-KNR4 cell-wall UP12_RS06005 PF10852 UP12_RS06005 UP12_RS06015 PF01636 Phosphotransferase enzyme family UP12_RS06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS06020 PF03466 LysR substrate binding domain UP12_RS06025 PF01177 Asp/Glu/Hydantoin racemase UP12_RS06030 PF13302 Acetyltransferase (GNAT) domain UP12_RS06035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS06035 PF03466 LysR substrate binding domain UP12_RS06040 PF07690 Major Facilitator Superfamily UP12_RS06050 PF00440 Bacterial regulatory proteins, tetR family UP12_RS06055 PF13673 Acetyltransferase (GNAT) domain UP12_RS06060 PF08020 Protein of unknown function (DUF1706) UP12_RS06065 PF13174 Tetratricopeptide repeat UP12_RS06065 PF13181 Tetratricopeptide repeat UP12_RS06075 PF06445 GyrI-like small molecule binding domain UP12_RS06085 PF00842 Alanine racemase, C-terminal domain UP12_RS06085 PF01168 Alanine racemase, N-terminal domain UP12_RS06090 PF00107 Zinc-binding dehydrogenase UP12_RS06090 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS06095 PF00440 Bacterial regulatory proteins, tetR family UP12_RS06095 PF14278 UP12_RS06095 UP12_RS06100 PF01344 Kelch motif UP12_RS06105 PF00669 Bacterial flagellin N-terminal helical region UP12_RS06105 PF00700 Bacterial flagellin C-terminal helical region UP12_RS06110 PF00669 Bacterial flagellin N-terminal helical region UP12_RS06110 PF00700 Bacterial flagellin C-terminal helical region UP12_RS06115 PF00669 Bacterial flagellin N-terminal helical region UP12_RS06115 PF00700 Bacterial flagellin C-terminal helical region UP12_RS06120 PF00669 Bacterial flagellin N-terminal helical region UP12_RS06120 PF00700 Bacterial flagellin C-terminal helical region UP12_RS06125 PF01494 FAD binding domain UP12_RS06130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS06140 PF05908 Protein of unknown function (DUF867) UP12_RS06145 PF06114 Domain of unknown function (DUF955) UP12_RS06150 PF01471 Putative peptidoglycan binding domain UP12_RS06150 PF01476 LysM domain UP12_RS06150 PF01510 N-acetylmuramoyl-L-alanine amidase UP12_RS06155 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system UP12_RS06160 PF14171 Toxin SpoIISA, type II toxin-antitoxin system UP12_RS06165 PF01384 UP12_RS06165 UP12_RS06170 PF01865 Protein of unknown function DUF47 UP12_RS06175 PF04266 ASCH domain UP12_RS06180 PF01019 Gamma-glutamyltranspeptidase UP12_RS06185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP12_RS06190 PF03611 UP12_RS06190 UP12_RS06195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS06205 PF00107 Zinc-binding dehydrogenase UP12_RS06205 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS06210 PF00676 Dehydrogenase E1 component UP12_RS06215 PF02779 Transketolase, pyrimidine binding domain UP12_RS06215 PF02780 Transketolase, C-terminal domain UP12_RS06220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP12_RS06220 PF00364 Biotin-requiring enzyme UP12_RS06220 PF02817 e3 binding domain UP12_RS06225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP12_RS06225 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS06230 PF00106 short chain dehydrogenase UP12_RS06235 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS06240 PF04198 Putative sugar-binding domain UP12_RS06240 PF13384 Homeodomain-like domain UP12_RS06250 PF13520 Amino acid permease UP12_RS06255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS06260 PF13180 PDZ domain UP12_RS06260 PF13365 Trypsin-like peptidase domain UP12_RS06265 PF03807 NADP oxidoreductase coenzyme F420-dependent UP12_RS06265 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP12_RS06270 PF04951 D-aminopeptidase UP12_RS06275 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS06280 PF12911 UP12_RS06280 UP12_RS06285 PF00005 ABC transporter UP12_RS06285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP12_RS06290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP12_RS06295 PF02016 LD-carboxypeptidase UP12_RS06300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UP12_RS06300 PF13378 Enolase C-terminal domain-like UP12_RS06305 PF00877 NlpC/P60 family UP12_RS06310 PF00005 ABC transporter UP12_RS06310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP12_RS06315 PF02274 Amidinotransferase UP12_RS06320 PF03061 Thioesterase superfamily UP12_RS06325 PF03551 Transcriptional regulator PadR-like family UP12_RS06335 PF06695 UP12_RS06335 UP12_RS06340 PF13302 Acetyltransferase (GNAT) domain UP12_RS06345 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UP12_RS06345 PF02805 Metal binding domain of Ada UP12_RS06345 PF12833 Helix-turn-helix domain UP12_RS06350 PF00893 Small Multidrug Resistance protein UP12_RS06355 PF00893 Small Multidrug Resistance protein UP12_RS06365 PF00551 Formyl transferase UP12_RS06365 PF01842 ACT domain UP12_RS06370 PF00696 Amino acid kinase family UP12_RS06370 PF01472 PUA domain UP12_RS06375 PF00171 Aldehyde dehydrogenase family UP12_RS06380 PF13424 Tetratricopeptide repeat UP12_RS06390 PF02566 OsmC-like protein UP12_RS06395 PF01047 MarR family UP12_RS06400 PF02566 OsmC-like protein UP12_RS06405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP12_RS06410 PF01717 Cobalamin-independent synthase, Catalytic domain UP12_RS06410 PF08267 Cobalamin-independent synthase, N-terminal domain UP12_RS06415 PF00082 Subtilase family UP12_RS06420 PF00072 Response regulator receiver domain UP12_RS06420 PF00486 Transcriptional regulatory protein, C terminal UP12_RS06425 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS06425 PF00672 HAMP domain UP12_RS06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS06430 PF03413 Peptidase propeptide and YPEB domain UP12_RS06435 PF03413 Peptidase propeptide and YPEB domain UP12_RS06445 PF00571 CBS domain UP12_RS06445 PF01769 Divalent cation transporter UP12_RS06445 PF03448 MgtE intracellular N domain UP12_RS06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS06455 PF03466 LysR substrate binding domain UP12_RS06460 PF07883 Cupin domain UP12_RS06465 PF13411 MerR HTH family regulatory protein UP12_RS06475 PF01047 MarR family UP12_RS06480 PF00563 EAL domain UP12_RS06480 PF00990 GGDEF domain UP12_RS06480 PF03707 UP12_RS06480 UP12_RS06485 PF09335 UP12_RS06485 UP12_RS06490 PF03741 UP12_RS06490 UP12_RS06495 PF04542 Sigma-70 region 2 UP12_RS06500 PF12791 UP12_RS06500 UP12_RS06505 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP12_RS06510 PF08876 UP12_RS06510 UP12_RS06515 PF01435 Peptidase family M48 UP12_RS06520 PF02386 Cation transport protein UP12_RS06525 PF04239 Protein of unknown function (DUF421) UP12_RS06535 PF01757 UP12_RS06535 UP12_RS06540 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS06540 PF00989 PAS fold UP12_RS06540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS06540 PF13188 PAS domain UP12_RS06540 PF13426 PAS domain UP12_RS06545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UP12_RS06545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UP12_RS06550 PF01008 Initiation factor 2 subunit family UP12_RS06555 PF01636 Phosphotransferase enzyme family UP12_RS06560 PF00155 Aminotransferase class I and II UP12_RS06565 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain UP12_RS06565 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain UP12_RS06570 PF12710 haloacid dehalogenase-like hydrolase UP12_RS06575 PF00596 Class II Aldolase and Adducin N-terminal domain UP12_RS06580 PF03079 ARD/ARD' family UP12_RS06585 PF09388 Spo0E like sporulation regulatory protein UP12_RS06590 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS06590 PF02743 Cache domain UP12_RS06595 PF01047 MarR family UP12_RS06600 PF00691 OmpA family UP12_RS06600 PF13677 UP12_RS06600 UP12_RS06605 PF01618 UP12_RS06605 UP12_RS06610 PF00004 ATPase family associated with various cellular activities (AAA) UP12_RS06610 PF02151 UvrB/uvrC motif UP12_RS06610 PF07724 AAA domain (Cdc48 subfamily) UP12_RS06610 PF10431 C-terminal, D2-small domain, of ClpB protein UP12_RS06620 PF06508 Queuosine biosynthesis protein QueC UP12_RS06625 PF01242 6-pyruvoyl tetrahydropterin synthase UP12_RS06630 PF04055 Radical SAM superfamily UP12_RS06630 PF13394 4Fe-4S single cluster domain UP12_RS06635 PF14489 QueF-like protein UP12_RS06650 PF09953 UP12_RS06650 UP12_RS06660 PF07486 Cell Wall Hydrolase UP12_RS06665 PF01943 UP12_RS06665 UP12_RS06670 PF00578 AhpC/TSA family UP12_RS06675 PF00122 E1-E2 ATPase UP12_RS06675 PF00702 haloacid dehalogenase-like hydrolase UP12_RS06680 PF00557 Metallopeptidase family M24 UP12_RS06680 PF01321 Creatinase/Prolidase N-terminal domain UP12_RS06685 PF00356 Bacterial regulatory proteins, lacI family UP12_RS06685 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UP12_RS06690 PF00874 PRD domain UP12_RS06690 PF03123 CAT RNA binding domain UP12_RS06695 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP12_RS06695 PF00367 phosphotransferase system, EIIB UP12_RS06695 PF02378 Phosphotransferase system, EIIC UP12_RS06700 PF00381 PTS HPr component phosphorylation site UP12_RS06705 PF00391 PEP-utilising enzyme, mobile domain UP12_RS06705 PF02896 PEP-utilising enzyme, TIM barrel domain UP12_RS06705 PF05524 PEP-utilising enzyme, N-terminal UP12_RS06710 PF11132 UP12_RS06710 UP12_RS06720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS06720 PF00672 HAMP domain UP12_RS06720 PF02743 Cache domain UP12_RS06725 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS06730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP12_RS06730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UP12_RS06735 PF00188 Cysteine-rich secretory protein family UP12_RS06740 PF00905 Penicillin binding protein transpeptidase domain UP12_RS06740 PF03717 Penicillin-binding Protein dimerisation domain UP12_RS06745 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS06745 PF00989 PAS fold UP12_RS06745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS06745 PF13426 PAS domain UP12_RS06750 PF00155 Aminotransferase class I and II UP12_RS06755 PF01545 Cation efflux family UP12_RS06755 PF16916 UP12_RS06755 UP12_RS06760 PF06271 UP12_RS06760 UP12_RS06765 PF11700 UP12_RS06765 UP12_RS06770 PF00072 Response regulator receiver domain UP12_RS06770 PF01584 CheW-like domain UP12_RS06775 PF14177 UP12_RS06775 UP12_RS06790 PF07690 Major Facilitator Superfamily UP12_RS06795 PF01476 LysM domain UP12_RS06795 PF03734 L,D-transpeptidase catalytic domain UP12_RS06800 PF00149 Calcineurin-like phosphoesterase UP12_RS06800 PF10518 TAT (twin-arginine translocation) pathway signal sequence UP12_RS06805 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS06810 PF00563 EAL domain UP12_RS06810 PF10388 EAL-domain associated signalling protein domain UP12_RS06815 PF05067 Manganese containing catalase UP12_RS06820 PF08796 Protein of unknown function (DUF1797) UP12_RS06825 PF04308 UP12_RS06825 UP12_RS06830 PF14156 Antirepressor AbbA UP12_RS06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS06840 PF03466 LysR substrate binding domain UP12_RS06850 PF00258 Flavodoxin UP12_RS06860 PF00258 Flavodoxin UP12_RS06865 PF00132 Bacterial transferase hexapeptide (six repeats) UP12_RS06865 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal UP12_RS06865 PF14602 Hexapeptide repeat of succinyl-transferase UP12_RS06870 PF01546 Peptidase family M20/M25/M40 UP12_RS06870 PF07687 Peptidase dimerisation domain UP12_RS06875 PF03698 UP12_RS06875 UP12_RS06880 PF00924 Mechanosensitive ion channel UP12_RS06885 PF00578 AhpC/TSA family UP12_RS06885 PF10417 C-terminal domain of 1-Cys peroxiredoxin UP12_RS06890 PF00578 AhpC/TSA family UP12_RS06905 PF12804 MobA-like NTP transferase domain UP12_RS06910 PF00899 ThiF family UP12_RS06915 PF00994 Probable molybdopterin binding domain UP12_RS06915 PF03453 MoeA N-terminal region (domain I and II) UP12_RS06915 PF03454 MoeA C-terminal region (domain IV) UP12_RS06920 PF03205 Molybdopterin guanine dinucleotide synthesis protein B UP12_RS06925 PF02391 MoaE protein UP12_RS06930 PF02597 ThiS family UP12_RS06940 PF04893 UP12_RS06940 UP12_RS06945 PF16576 UP12_RS06945 UP12_RS06950 PF00005 ABC transporter UP12_RS06955 PF02687 UP12_RS06955 UP12_RS06955 PF12704 MacB-like periplasmic core domain UP12_RS06960 PF00455 UP12_RS06960 UP12_RS06960 PF08220 DeoR-like helix-turn-helix domain UP12_RS06965 PF00294 pfkB family carbohydrate kinase UP12_RS06970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP12_RS06970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS06970 PF02378 Phosphotransferase system, EIIC UP12_RS06975 PF00717 Peptidase S24-like UP12_RS06985 PF00005 ABC transporter UP12_RS06985 PF12848 ABC transporter UP12_RS06990 PF02073 Thermophilic metalloprotease (M29) UP12_RS06995 PF06723 MreB/Mbl protein UP12_RS07000 PF04014 Antidote-toxin recognition MazE UP12_RS07005 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS07005 PF00989 PAS fold UP12_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS07010 PF06094 AIG2-like family UP12_RS07010 PF13772 AIG2-like family UP12_RS07015 PF02080 TrkA-C domain UP12_RS07015 PF02254 TrkA-N domain UP12_RS07020 PF01979 Amidohydrolase family UP12_RS07020 PF13382 Adenine deaminase C-terminal domain UP12_RS07025 PF00753 Metallo-beta-lactamase superfamily UP12_RS07025 PF07521 RNA-metabolising metallo-beta-lactamase UP12_RS07030 PF07288 Protein of unknown function (DUF1447) UP12_RS07035 PF08282 haloacid dehalogenase-like hydrolase UP12_RS07040 PF01327 Polypeptide deformylase UP12_RS07045 PF09680 UP12_RS07045 UP12_RS07050 PF10368 Putative cell-wall binding lipoprotein UP12_RS07055 PF00676 Dehydrogenase E1 component UP12_RS07060 PF02779 Transketolase, pyrimidine binding domain UP12_RS07060 PF02780 Transketolase, C-terminal domain UP12_RS07065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP12_RS07065 PF00364 Biotin-requiring enzyme UP12_RS07065 PF02817 e3 binding domain UP12_RS07070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP12_RS07070 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS07085 PF01276 Orn/Lys/Arg decarboxylase, major domain UP12_RS07085 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UP12_RS07090 PF05256 Uncharacterised protein family (UPF0223) UP12_RS07095 PF06335 Protein of unknown function (DUF1054) UP12_RS07105 PF00459 Inositol monophosphatase family UP12_RS07120 PF04542 Sigma-70 region 2 UP12_RS07120 PF08281 Sigma-70, region 4 UP12_RS07125 PF13490 Putative zinc-finger UP12_RS07140 PF00009 Elongation factor Tu GTP binding domain UP12_RS07140 PF00679 Elongation factor G C-terminus UP12_RS07140 PF03144 Elongation factor Tu domain 2 UP12_RS07140 PF14492 Elongation Factor G, domain II UP12_RS07145 PF14036 UP12_RS07145 UP12_RS07150 PF09963 UP12_RS07150 UP12_RS07155 PF09580 UP12_RS07155 UP12_RS07160 PF02562 PhoH-like protein UP12_RS07160 PF13638 PIN domain UP12_RS07170 PF04960 Glutaminase UP12_RS07175 PF07408 Protein of unknown function (DUF1507) UP12_RS07180 PF01098 UP12_RS07180 UP12_RS07185 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain UP12_RS07185 PF00364 Biotin-requiring enzyme UP12_RS07185 PF00682 HMGL-like UP12_RS07185 PF02436 Conserved carboxylase domain UP12_RS07185 PF02785 Biotin carboxylase C-terminal domain UP12_RS07185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP12_RS07190 PF00875 DNA photolyase UP12_RS07190 PF03441 FAD binding domain of DNA photolyase UP12_RS07195 PF02628 UP12_RS07195 UP12_RS07200 PF01040 UbiA prenyltransferase family UP12_RS07205 PF00034 Cytochrome c UP12_RS07205 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UP12_RS07205 PF02790 Cytochrome C oxidase subunit II, transmembrane domain UP12_RS07210 PF00115 Cytochrome C and Quinol oxidase polypeptide I UP12_RS07215 PF00510 Cytochrome c oxidase subunit III UP12_RS07220 PF03626 UP12_RS07220 UP12_RS07225 PF09678 UP12_RS07225 UP12_RS07230 PF08868 YugN-like family UP12_RS07235 PF00571 CBS domain UP12_RS07240 PF00188 Cysteine-rich secretory protein family UP12_RS07240 PF14504 CAP-associated N-terminal UP12_RS07245 PF14071 UP12_RS07245 UP12_RS07250 PF14003 UP12_RS07250 UP12_RS07260 PF06133 Protein of unknown function (DUF964) UP12_RS07265 PF09902 UP12_RS07265 UP12_RS07270 PF03602 Conserved hypothetical protein 95 UP12_RS07275 PF01467 Cytidylyltransferase UP12_RS07280 PF07670 Nucleoside recognition UP12_RS07285 PF01734 Patatin-like phospholipase UP12_RS07290 PF05362 Lon protease (S16) C-terminal proteolytic domain UP12_RS07290 PF13180 PDZ domain UP12_RS07295 PF05636 HIGH Nucleotidyl Transferase UP12_RS07300 PF02620 UP12_RS07300 UP12_RS07305 PF01783 Ribosomal L32p protein family UP12_RS07310 PF13921 Myb-like DNA-binding domain UP12_RS07315 PF13508 Acetyltransferase (GNAT) domain UP12_RS07320 PF02558 Ketopantoate reductase PanE/ApbA UP12_RS07320 PF08546 Ketopantoate reductase PanE/ApbA C terminal UP12_RS07325 PF10079 UP12_RS07325 UP12_RS07330 PF02381 MraZ protein UP12_RS07335 PF01795 MraW methylase family UP12_RS07345 PF00905 Penicillin binding protein transpeptidase domain UP12_RS07345 PF03717 Penicillin-binding Protein dimerisation domain UP12_RS07345 PF03793 PASTA domain UP12_RS07350 PF00905 Penicillin binding protein transpeptidase domain UP12_RS07350 PF03717 Penicillin-binding Protein dimerisation domain UP12_RS07350 PF03793 PASTA domain UP12_RS07355 PF01225 Mur ligase family, catalytic domain UP12_RS07355 PF02875 Mur ligase family, glutamate ligase domain UP12_RS07355 PF08245 Mur ligase middle domain UP12_RS07360 PF00953 Glycosyl transferase family 4 UP12_RS07360 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 UP12_RS07365 PF02875 Mur ligase family, glutamate ligase domain UP12_RS07365 PF08245 Mur ligase middle domain UP12_RS07370 PF01098 UP12_RS07370 UP12_RS07375 PF03033 Glycosyltransferase family 28 N-terminal domain UP12_RS07375 PF04101 Glycosyltransferase family 28 C-terminal domain UP12_RS07380 PF01565 FAD binding domain UP12_RS07380 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain UP12_RS07385 PF03799 Cell division protein FtsQ UP12_RS07385 PF08478 POTRA domain, FtsQ-type UP12_RS07390 PF05949 Bacterial protein of unknown function (DUF881) UP12_RS07395 PF05949 Bacterial protein of unknown function (DUF881) UP12_RS07400 PF06947 UP12_RS07400 UP12_RS07405 PF02491 SHS2 domain inserted in FTSA UP12_RS07405 PF14450 Cell division protein FtsA UP12_RS07410 PF00091 Tubulin/FtsZ family, GTPase domain UP12_RS07410 PF12327 FtsZ family, C-terminal domain UP12_RS07415 PF00082 Subtilase family UP12_RS07415 PF05922 Peptidase inhibitor I9 UP12_RS07415 PF13620 Carboxypeptidase regulatory-like domain UP12_RS07420 PF03419 UP12_RS07420 UP12_RS07425 PF04542 Sigma-70 region 2 UP12_RS07425 PF04545 Sigma-70, region 4 UP12_RS07430 PF04539 Sigma-70 region 3 UP12_RS07430 PF04542 Sigma-70 region 2 UP12_RS07430 PF04545 Sigma-70, region 4 UP12_RS07435 PF04198 Putative sugar-binding domain UP12_RS07435 PF13384 Homeodomain-like domain UP12_RS07440 PF01113 Dihydrodipicolinate reductase, N-terminus UP12_RS07440 PF08666 SAF domain UP12_RS07445 PF06923 UP12_RS07445 UP12_RS07450 PF03608 UP12_RS07450 UP12_RS07455 PF03612 UP12_RS07455 UP12_RS07455 PF07663 UP12_RS07455 UP12_RS07460 PF03829 PTS system glucitol/sorbitol-specific IIA component UP12_RS07465 PF00005 ABC transporter UP12_RS07470 PF05239 PRC-barrel domain UP12_RS07475 PF02578 Multi-copper polyphenol oxidoreductase laccase UP12_RS07480 PF01168 Alanine racemase, N-terminal domain UP12_RS07485 PF04472 Protein of unknown function (DUF552) UP12_RS07490 PF02325 UP12_RS07490 UP12_RS07495 PF01479 S4 domain UP12_RS07500 PF05103 DivIVA protein UP12_RS07505 PF00133 tRNA synthetases class I (I, L, M and V) UP12_RS07505 PF08264 Anticodon-binding domain of tRNA UP12_RS07515 PF01252 UP12_RS07515 UP12_RS07520 PF00849 RNA pseudouridylate synthase UP12_RS07520 PF01479 S4 domain UP12_RS07525 PF00156 Phosphoribosyl transferase domain UP12_RS07530 PF00860 Permease family UP12_RS07535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UP12_RS07535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UP12_RS07540 PF01979 Amidohydrolase family UP12_RS07545 PF00117 Glutamine amidotransferase class-I UP12_RS07545 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UP12_RS07550 PF02142 MGS-like domain UP12_RS07550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP12_RS07550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UP12_RS07555 PF00175 Oxidoreductase NAD-binding domain UP12_RS07555 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B UP12_RS07560 PF01180 Dihydroorotate dehydrogenase UP12_RS07565 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UP12_RS07570 PF00156 Phosphoribosyl transferase domain UP12_RS07575 PF01507 Phosphoadenosine phosphosulfate reductase family UP12_RS07580 PF01384 UP12_RS07580 UP12_RS07585 PF01747 ATP-sulfurylase UP12_RS07585 PF14306 PUA-like domain UP12_RS07590 PF01583 Adenylylsulphate kinase UP12_RS07595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP12_RS07600 PF01903 CbiX UP12_RS07605 PF13241 Putative NAD(P)-binding UP12_RS07610 PF05670 UP12_RS07610 UP12_RS07610 PF05833 Fibronectin-binding protein A N-terminus (FbpA) UP12_RS07615 PF00122 E1-E2 ATPase UP12_RS07615 PF00689 Cation transporting ATPase, C-terminus UP12_RS07615 PF00690 Cation transporter/ATPase, N-terminus UP12_RS07615 PF00702 haloacid dehalogenase-like hydrolase UP12_RS07620 PF03755 UP12_RS07620 UP12_RS07620 PF08340 UP12_RS07620 UP12_RS07625 PF04025 UP12_RS07625 UP12_RS07630 PF00625 Guanylate kinase UP12_RS07635 PF01192 RNA polymerase Rpb6 UP12_RS07640 PF02441 Flavoprotein UP12_RS07640 PF04127 DNA / pantothenate metabolism flavoprotein UP12_RS07645 PF00271 Helicase conserved C-terminal domain UP12_RS07645 PF04851 Type III restriction enzyme, res subunit UP12_RS07650 PF01327 Polypeptide deformylase UP12_RS07655 PF00551 Formyl transferase UP12_RS07655 PF02911 Formyl transferase, C-terminal domain UP12_RS07660 PF01029 NusB family UP12_RS07660 PF01189 NOL1/NOP2/sun family UP12_RS07665 PF04055 Radical SAM superfamily UP12_RS07665 PF13394 4Fe-4S single cluster domain UP12_RS07670 PF13672 Protein phosphatase 2C UP12_RS07675 PF00069 Protein kinase domain UP12_RS07675 PF03793 PASTA domain UP12_RS07680 PF03193 Protein of unknown function, DUF258 UP12_RS07680 PF16745 UP12_RS07680 UP12_RS07685 PF00834 Ribulose-phosphate 3 epimerase family UP12_RS07690 PF04263 Thiamin pyrophosphokinase, catalytic domain UP12_RS07690 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain UP12_RS07695 PF08183 UP12_RS07695 UP12_RS07700 PF00830 Ribosomal L28 family UP12_RS07705 PF03780 UP12_RS07705 UP12_RS07710 PF02734 DAK2 domain UP12_RS07710 PF13684 Dihydroxyacetone kinase family UP12_RS07715 PF01842 ACT domain UP12_RS07715 PF03315 Serine dehydratase beta chain UP12_RS07720 PF03313 UP12_RS07720 UP12_RS07725 PF00270 DEAD/DEAH box helicase UP12_RS07725 PF00271 Helicase conserved C-terminal domain UP12_RS07725 PF17191 UP12_RS07725 UP12_RS07735 PF02504 Fatty acid synthesis protein UP12_RS07740 PF00698 Acyl transferase domain UP12_RS07745 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS07750 PF00550 Phosphopantetheine attachment site UP12_RS07755 PF00035 Double-stranded RNA binding motif UP12_RS07755 PF14622 Ribonuclease-III-like UP12_RS07760 PF02463 RecF/RecN/SMC N terminal domain UP12_RS07760 PF06470 SMC proteins Flexible Hinge Domain UP12_RS07765 PF00448 SRP54-type protein, GTPase domain UP12_RS07765 PF02881 SRP54-type protein, helical bundle domain UP12_RS07770 PF04297 Putative helix-turn-helix protein, YlxM / p13 like UP12_RS07775 PF00448 SRP54-type protein, GTPase domain UP12_RS07775 PF02881 SRP54-type protein, helical bundle domain UP12_RS07775 PF02978 Signal peptide binding domain UP12_RS07780 PF00886 Ribosomal protein S16 UP12_RS07785 PF13083 KH domain UP12_RS07790 PF11068 YlqD protein UP12_RS07795 PF01782 RimM N-terminal domain UP12_RS07795 PF05239 PRC-barrel domain UP12_RS07800 PF01746 tRNA (Guanine-1)-methyltransferase UP12_RS07805 PF01245 Ribosomal protein L19 UP12_RS07810 PF01926 50S ribosome-binding GTPase UP12_RS07815 PF01351 Ribonuclease HII UP12_RS07825 PF01312 FlhB HrpN YscU SpaS Family UP12_RS07830 PF00549 CoA-ligase UP12_RS07830 PF08442 ATP-grasp domain UP12_RS07835 PF00549 CoA-ligase UP12_RS07835 PF02629 CoA binding domain UP12_RS07840 PF02481 DNA recombination-mediator protein A UP12_RS07845 PF01131 DNA topoisomerase UP12_RS07845 PF01396 UP12_RS07845 UP12_RS07845 PF01751 Toprim domain UP12_RS07850 PF01134 Glucose inhibited division protein A UP12_RS07855 PF00589 Phage integrase family UP12_RS07855 PF02899 Phage integrase, N-terminal SAM-like domain UP12_RS07860 PF00227 Proteasome subunit UP12_RS07865 PF00004 ATPase family associated with various cellular activities (AAA) UP12_RS07865 PF07724 AAA domain (Cdc48 subfamily) UP12_RS07865 PF10431 C-terminal, D2-small domain, of ClpB protein UP12_RS07870 PF06018 CodY GAF-like domain UP12_RS07870 PF08222 CodY helix-turn-helix domain UP12_RS07875 PF00460 Flagella basal body rod protein UP12_RS07880 PF00460 Flagella basal body rod protein UP12_RS07880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP12_RS07885 PF02049 UP12_RS07885 UP12_RS07890 PF01514 Secretory protein of YscJ/FliF family UP12_RS07890 PF08345 UP12_RS07890 UP12_RS07895 PF01706 FliG C-terminal domain UP12_RS07895 PF14841 FliG middle domain UP12_RS07895 PF14842 FliG N-terminal domain UP12_RS07900 PF02108 UP12_RS07900 UP12_RS07905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP12_RS07905 PF02874 ATP synthase alpha/beta family, beta-barrel domain UP12_RS07910 PF02050 Flagellar FliJ protein UP12_RS07915 PF03448 MgtE intracellular N domain UP12_RS07920 PF02120 Flagellar hook-length control protein FliK UP12_RS07925 PF03963 UP12_RS07925 UP12_RS07930 PF00460 Flagella basal body rod protein UP12_RS07930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP12_RS07935 PF06289 UP12_RS07935 UP12_RS07940 PF03748 UP12_RS07940 UP12_RS07945 PF01052 Surface presentation of antigens (SPOA) UP12_RS07945 PF02154 Flagellar motor switch protein FliM UP12_RS07950 PF01052 Surface presentation of antigens (SPOA) UP12_RS07950 PF04509 CheC-like family UP12_RS07955 PF00072 Response regulator receiver domain UP12_RS07960 PF04347 UP12_RS07960 UP12_RS07965 PF00813 UP12_RS07965 UP12_RS07970 PF01313 UP12_RS07970 UP12_RS07975 PF01311 UP12_RS07975 UP12_RS07980 PF01312 FlhB HrpN YscU SpaS Family UP12_RS07985 PF00771 FHIPEP family UP12_RS07990 PF00448 SRP54-type protein, GTPase domain UP12_RS07995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UP12_RS08000 PF00072 Response regulator receiver domain UP12_RS08000 PF01339 CheB methylesterase UP12_RS08005 PF01584 CheW-like domain UP12_RS08005 PF01627 Hpt domain UP12_RS08005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS08005 PF02895 Signal transducing histidine kinase, homodimeric domain UP12_RS08005 PF07194 P2 response regulator binding domain UP12_RS08010 PF01584 CheW-like domain UP12_RS08015 PF04509 CheC-like family UP12_RS08020 PF03975 CheD chemotactic sensory transduction UP12_RS08025 PF04539 Sigma-70 region 3 UP12_RS08025 PF04542 Sigma-70 region 2 UP12_RS08025 PF04545 Sigma-70, region 4 UP12_RS08035 PF00318 Ribosomal protein S2 UP12_RS08040 PF00889 Elongation factor TS UP12_RS08045 PF00696 Amino acid kinase family UP12_RS08050 PF01765 Ribosome recycling factor UP12_RS08055 PF01255 Putative undecaprenyl diphosphate synthase UP12_RS08060 PF01148 Cytidylyltransferase family UP12_RS08065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase UP12_RS08065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal UP12_RS08065 PF13288 DXP reductoisomerase C-terminal domain UP12_RS08070 PF02163 Peptidase family M50 UP12_RS08070 PF13180 PDZ domain UP12_RS08075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP12_RS08075 PF03129 Anticodon binding domain UP12_RS08075 PF04073 Aminoacyl-tRNA editing domain UP12_RS08080 PF00929 Exonuclease UP12_RS08080 PF02811 PHP domain UP12_RS08080 PF07733 Bacterial DNA polymerase III alpha subunit UP12_RS08080 PF11490 UP12_RS08080 UP12_RS08080 PF14480 UP12_RS08080 UP12_RS08080 PF14579 Helix-hairpin-helix motif UP12_RS08085 PF00759 Glycosyl hydrolase family 9 UP12_RS08085 PF00942 Cellulose binding domain UP12_RS08090 PF02011 Glycosyl hydrolase family 48 UP12_RS08095 PF00331 Glycosyl hydrolase family 10 UP12_RS08100 PF00150 Cellulase (glycosyl hydrolase family 5) UP12_RS08105 PF02576 Uncharacterised BCR, YhbC family COG0779 UP12_RS08110 PF00575 S1 RNA binding domain UP12_RS08110 PF08529 NusA N-terminal domain UP12_RS08110 PF13184 NusA-like KH domain UP12_RS08115 PF04296 Protein of unknown function (DUF448) UP12_RS08120 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family UP12_RS08125 PF00009 Elongation factor Tu GTP binding domain UP12_RS08125 PF04760 Translation initiation factor IF-2, N-terminal region UP12_RS08125 PF11987 Translation-initiation factor 2 UP12_RS08130 PF04456 Protein of unknown function (DUF503) UP12_RS08135 PF02033 Ribosome-binding factor A UP12_RS08140 PF01509 TruB family pseudouridylate synthase (N terminal domain) UP12_RS08140 PF16198 UP12_RS08140 UP12_RS08145 PF01687 Riboflavin kinase UP12_RS08145 PF06574 FAD synthetase UP12_RS08150 PF00312 Ribosomal protein S15 UP12_RS08155 PF00013 KH domain UP12_RS08155 PF00575 S1 RNA binding domain UP12_RS08155 PF01138 3' exoribonuclease family, domain 1 UP12_RS08155 PF03725 3' exoribonuclease family, domain 2 UP12_RS08155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain UP12_RS08160 PF01522 Polysaccharide deacetylase UP12_RS08165 PF00675 Insulinase (Peptidase family M16) UP12_RS08165 PF05193 Peptidase M16 inactive domain UP12_RS08170 PF01636 Phosphotransferase enzyme family UP12_RS08175 PF05239 PRC-barrel domain UP12_RS08180 PF01262 Alanine dehydrogenase/PNT, C-terminal domain UP12_RS08180 PF16924 UP12_RS08180 UP12_RS08185 PF02441 Flavoprotein UP12_RS08190 PF01118 Semialdehyde dehydrogenase, NAD binding domain UP12_RS08190 PF02774 Semialdehyde dehydrogenase, dimerisation domain UP12_RS08195 PF00696 Amino acid kinase family UP12_RS08195 PF13840 ACT domain UP12_RS08200 PF00701 Dihydrodipicolinate synthetase family UP12_RS08205 PF00753 Metallo-beta-lactamase superfamily UP12_RS08205 PF07521 RNA-metabolising metallo-beta-lactamase UP12_RS08210 PF00574 Clp protease UP12_RS08215 PF14035 UP12_RS08215 UP12_RS08220 PF01580 FtsK/SpoIIIE family UP12_RS08220 PF09397 Ftsk gamma domain UP12_RS08225 PF00392 Bacterial regulatory proteins, gntR family UP12_RS08225 PF07702 UTRA domain UP12_RS08230 PF07690 Major Facilitator Superfamily UP12_RS08235 PF03176 MMPL family UP12_RS08240 PF05193 Peptidase M16 inactive domain UP12_RS08245 PF00675 Insulinase (Peptidase family M16) UP12_RS08245 PF05193 Peptidase M16 inactive domain UP12_RS08250 PF01047 MarR family UP12_RS08255 PF03176 MMPL family UP12_RS08260 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS08265 PF11588 Protein of unknown function (DUF3243) UP12_RS08270 PF11868 UP12_RS08270 UP12_RS08275 PF13413 Helix-turn-helix domain UP12_RS08275 PF13464 UP12_RS08275 UP12_RS08280 PF01066 CDP-alcohol phosphatidyltransferase UP12_RS08285 PF00994 Probable molybdopterin binding domain UP12_RS08285 PF02464 Competence-damaged protein UP12_RS08290 PF00154 recA bacterial DNA recombination protein UP12_RS08295 PF00013 KH domain UP12_RS08295 PF01966 HD domain UP12_RS08295 PF12072 UP12_RS08295 UP12_RS08300 PF13277 YmdB-like protein UP12_RS08310 PF04232 Stage V sporulation protein S (SpoVS) UP12_RS08315 PF00873 AcrB/AcrD/AcrF family UP12_RS08320 PF00107 Zinc-binding dehydrogenase UP12_RS08320 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS08325 PF00155 Aminotransferase class I and II UP12_RS08330 PF12102 Domain of unknown function (DUF3578) UP12_RS08330 PF13020 UP12_RS08330 UP12_RS08335 PF00919 Uncharacterized protein family UPF0004 UP12_RS08335 PF01938 TRAM domain UP12_RS08335 PF04055 Radical SAM superfamily UP12_RS08340 PF06133 Protein of unknown function (DUF964) UP12_RS08345 PF10628 UP12_RS08345 UP12_RS08350 PF00488 MutS domain V UP12_RS08350 PF01624 MutS domain I UP12_RS08350 PF05188 MutS domain II UP12_RS08350 PF05190 MutS family domain IV UP12_RS08350 PF05192 MutS domain III UP12_RS08355 PF01119 DNA mismatch repair protein, C-terminal domain UP12_RS08355 PF08676 MutL C terminal dimerisation domain UP12_RS08355 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS08375 PF02559 CarD-like/TRCF domain UP12_RS08380 PF05908 Protein of unknown function (DUF867) UP12_RS08385 PF13374 Tetratricopeptide repeat UP12_RS08390 PF00082 Subtilase family UP12_RS08395 PF05908 Protein of unknown function (DUF867) UP12_RS08400 PF02566 OsmC-like protein UP12_RS08405 PF00893 Small Multidrug Resistance protein UP12_RS08410 PF00893 Small Multidrug Resistance protein UP12_RS08415 PF00440 Bacterial regulatory proteins, tetR family UP12_RS08425 PF12788 UP12_RS08425 UP12_RS08430 PF01715 IPP transferase UP12_RS08440 PF14157 YmzC-like protein UP12_RS08450 PF07972 NrdI Flavodoxin like UP12_RS08455 PF00317 Ribonucleotide reductase, all-alpha domain UP12_RS08455 PF02867 Ribonucleotide reductase, barrel domain UP12_RS08455 PF08343 Ribonucleotide reductase N-terminal UP12_RS08460 PF00268 Ribonucleotide reductase, small chain UP12_RS08470 PF01520 N-acetylmuramoyl-L-alanine amidase UP12_RS08470 PF05036 Sporulation related domain UP12_RS08475 PF00004 ATPase family associated with various cellular activities (AAA) UP12_RS08480 PF01926 50S ribosome-binding GTPase UP12_RS08480 PF13167 UP12_RS08480 UP12_RS08480 PF16360 UP12_RS08480 UP12_RS08485 PF06838 Methionine gamma-lyase UP12_RS08490 PF13411 MerR HTH family regulatory protein UP12_RS08495 PF00120 Glutamine synthetase, catalytic domain UP12_RS08495 PF03951 Glutamine synthetase, beta-Grasp domain UP12_RS08505 PF13424 Tetratricopeptide repeat UP12_RS08510 PF04740 UP12_RS08510 UP12_RS08515 PF14112 UP12_RS08515 UP12_RS08520 PF13930 DNA/RNA non-specific endonuclease UP12_RS08525 PF04634 Protein of unknown function, DUF600 UP12_RS08530 PF01661 Macro domain UP12_RS08535 PF13302 Acetyltransferase (GNAT) domain UP12_RS08540 PF01569 PAP2 superfamily UP12_RS08545 PF08818 Domain of unknown function (DU1801) UP12_RS08555 PF13424 Tetratricopeptide repeat UP12_RS08565 PF06912 UP12_RS08565 UP12_RS08570 PF01068 ATP dependent DNA ligase domain UP12_RS08575 PF02735 Ku70/Ku80 beta-barrel domain UP12_RS08580 PF09954 UP12_RS08580 UP12_RS08585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS08590 PF02082 Transcriptional regulator UP12_RS08595 PF05368 NmrA-like family UP12_RS08600 PF02754 UP12_RS08600 UP12_RS08605 PF02589 Uncharacterised ACR, YkgG family COG1556 UP12_RS08605 PF11870 UP12_RS08605 UP12_RS08605 PF13183 4Fe-4S dicluster domain UP12_RS08610 PF02589 Uncharacterised ACR, YkgG family COG1556 UP12_RS08625 PF00149 Calcineurin-like phosphoesterase UP12_RS08625 PF09511 RNA ligase UP12_RS08625 PF13671 AAA domain UP12_RS08630 PF04239 Protein of unknown function (DUF421) UP12_RS08635 PF00440 Bacterial regulatory proteins, tetR family UP12_RS08635 PF16295 UP12_RS08635 UP12_RS08640 PF00067 Cytochrome P450 UP12_RS08640 PF00175 Oxidoreductase NAD-binding domain UP12_RS08640 PF00258 Flavodoxin UP12_RS08640 PF00667 FAD binding domain UP12_RS08645 PF00089 Trypsin UP12_RS08650 PF14040 UP12_RS08650 UP12_RS08655 PF01740 STAS domain UP12_RS08660 PF16800 UP12_RS08660 UP12_RS08670 PF00717 Peptidase S24-like UP12_RS08670 PF01726 LexA DNA binding domain UP12_RS08675 PF01476 LysM domain UP12_RS08680 PF00239 Resolvase, N terminal domain UP12_RS08685 PF05979 Bacterial protein of unknown function (DUF896) UP12_RS08690 PF00456 Transketolase, thiamine diphosphate binding domain UP12_RS08690 PF02779 Transketolase, pyrimidine binding domain UP12_RS08690 PF02780 Transketolase, C-terminal domain UP12_RS08695 PF10747 Protein of unknown function (DUF2522) UP12_RS08700 PF03672 UP12_RS08700 UP12_RS08705 PF09388 Spo0E like sporulation regulatory protein UP12_RS08710 PF02683 UP12_RS08710 UP12_RS08715 PF07301 UP12_RS08715 UP12_RS08720 PF11084 UP12_RS08720 UP12_RS08730 PF08179 UP12_RS08730 UP12_RS08735 PF08175 UP12_RS08735 UP12_RS08740 PF00330 Aconitase family (aconitate hydratase) UP12_RS08740 PF00694 Aconitase C-terminal domain UP12_RS08745 PF00578 AhpC/TSA family UP12_RS08750 PF08177 UP12_RS08750 UP12_RS08760 PF03061 Thioesterase superfamily UP12_RS08770 PF01521 Iron-sulphur cluster biosynthesis UP12_RS08775 PF02660 UP12_RS08775 UP12_RS08780 PF13380 CoA binding domain UP12_RS08790 PF00204 DNA gyrase B UP12_RS08790 PF00986 DNA gyrase B subunit, carboxyl terminus UP12_RS08790 PF01751 Toprim domain UP12_RS08790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS08795 PF00521 DNA gyrase/topoisomerase IV, subunit A UP12_RS08795 PF03989 DNA gyrase C-terminal domain, beta-propeller UP12_RS08805 PF07690 Major Facilitator Superfamily UP12_RS08810 PF00132 Bacterial transferase hexapeptide (six repeats) UP12_RS08815 PF01451 Low molecular weight phosphotyrosine protein phosphatase UP12_RS08820 PF02040 UP12_RS08820 UP12_RS08825 PF01022 Bacterial regulatory protein, arsR family UP12_RS08830 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS08835 PF01323 DSBA-like thioredoxin domain UP12_RS08840 PF02525 Flavodoxin-like fold UP12_RS08845 PF13460 NADH(P)-binding UP12_RS08850 PF00440 Bacterial regulatory proteins, tetR family UP12_RS08855 PF02525 Flavodoxin-like fold UP12_RS08860 PF01638 HxlR-like helix-turn-helix UP12_RS08870 PF00291 Pyridoxal-phosphate dependent enzyme UP12_RS08875 PF01042 Endoribonuclease L-PSP UP12_RS08880 PF08348 UP12_RS08880 UP12_RS08880 PF13309 UP12_RS08880 UP12_RS08885 PF00440 Bacterial regulatory proteins, tetR family UP12_RS08885 PF02909 Tetracyclin repressor, C-terminal all-alpha domain UP12_RS08890 PF01494 FAD binding domain UP12_RS08900 PF13564 UP12_RS08900 UP12_RS08905 PF01047 MarR family UP12_RS08910 PF00440 Bacterial regulatory proteins, tetR family UP12_RS08915 PF13743 Thioredoxin UP12_RS08920 PF08803 Putative mono-oxygenase ydhR UP12_RS08925 PF03403 Platelet-activating factor acetylhydrolase, isoform II UP12_RS08930 PF00805 Pentapeptide repeats (8 copies) UP12_RS08930 PF13599 Pentapeptide repeats (9 copies) UP12_RS08940 PF10852 UP12_RS08940 UP12_RS08945 PF07859 alpha/beta hydrolase fold UP12_RS08950 PF13411 MerR HTH family regulatory protein UP12_RS08955 PF09685 UP12_RS08955 UP12_RS08960 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS08965 PF00072 Response regulator receiver domain UP12_RS08965 PF00486 Transcriptional regulatory protein, C terminal UP12_RS08970 PF17189 UP12_RS08970 UP12_RS08975 PF03422 Carbohydrate binding module (family 6) UP12_RS08975 PF04616 Glycosyl hydrolases family 43 UP12_RS08980 PF00171 Aldehyde dehydrogenase family UP12_RS08985 PF02056 Family 4 glycosyl hydrolase UP12_RS08985 PF11975 Family 4 glycosyl hydrolase C-terminal domain UP12_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS08995 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS09000 PF01547 Bacterial extracellular solute-binding protein UP12_RS09005 PF00356 Bacterial regulatory proteins, lacI family UP12_RS09005 PF13377 Periplasmic binding protein-like domain UP12_RS09010 PF00834 Ribulose-phosphate 3 epimerase family UP12_RS09015 PF03611 UP12_RS09015 UP12_RS09020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS09025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP12_RS09025 PF00874 PRD domain UP12_RS09025 PF05043 Mga helix-turn-helix domain UP12_RS09025 PF08279 HTH domain UP12_RS09035 PF04740 UP12_RS09035 UP12_RS09035 PF14449 UP12_RS09035 UP12_RS09035 PF15657 UP12_RS09035 UP12_RS09040 PF01047 MarR family UP12_RS09045 PF07690 Major Facilitator Superfamily UP12_RS09050 PF01116 Fructose-bisphosphate aldolase class-II UP12_RS09055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP12_RS09060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS09065 PF00294 pfkB family carbohydrate kinase UP12_RS09070 PF01380 SIS domain UP12_RS09070 PF01418 Helix-turn-helix domain, rpiR family UP12_RS09075 PF13091 PLD-like domain UP12_RS09080 PF04657 UP12_RS09080 UP12_RS09085 PF00027 Cyclic nucleotide-binding domain UP12_RS09085 PF13545 Crp-like helix-turn-helix domain UP12_RS09090 PF04657 UP12_RS09090 UP12_RS09095 PF00171 Aldehyde dehydrogenase family UP12_RS09100 PF00175 Oxidoreductase NAD-binding domain UP12_RS09100 PF00258 Flavodoxin UP12_RS09100 PF00667 FAD binding domain UP12_RS09105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UP12_RS09105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UP12_RS09110 PF00501 AMP-binding enzyme UP12_RS09110 PF13193 AMP-binding enzyme C-terminal domain UP12_RS09110 PF16177 UP12_RS09110 UP12_RS09115 PF01039 Carboxyl transferase domain UP12_RS09120 PF00378 Enoyl-CoA hydratase/isomerase family UP12_RS09125 PF00682 HMGL-like UP12_RS09130 PF00364 Biotin-requiring enzyme UP12_RS09135 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain UP12_RS09135 PF02785 Biotin carboxylase C-terminal domain UP12_RS09135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP12_RS09140 PF00501 AMP-binding enzyme UP12_RS09140 PF13193 AMP-binding enzyme C-terminal domain UP12_RS09145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP12_RS09145 PF02770 Acyl-CoA dehydrogenase, middle domain UP12_RS09145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP12_RS09150 PF02638 UP12_RS09150 UP12_RS09155 PF13350 Tyrosine phosphatase family UP12_RS09160 PF00455 UP12_RS09160 UP12_RS09160 PF08220 DeoR-like helix-turn-helix domain UP12_RS09165 PF14552 Tautomerase enzyme UP12_RS09175 PF05651 UP12_RS09175 UP12_RS09175 PF13556 PucR C-terminal helix-turn-helix domain UP12_RS09180 PF01565 FAD binding domain UP12_RS09180 PF02913 FAD linked oxidases, C-terminal domain UP12_RS09185 PF02754 UP12_RS09185 UP12_RS09185 PF13183 4Fe-4S dicluster domain UP12_RS09190 PF03323 UP12_RS09190 UP12_RS09195 PF03845 UP12_RS09195 UP12_RS09200 PF05504 Spore germination B3/ GerAC like, C-terminal UP12_RS09205 PF12728 Helix-turn-helix domain UP12_RS09215 PF09335 UP12_RS09215 UP12_RS09220 PF02602 Uroporphyrinogen-III synthase HemD UP12_RS09225 PF01184 UP12_RS09225 UP12_RS09230 PF00296 Luciferase-like monooxygenase UP12_RS09235 PF01391 Collagen triple helix repeat (20 copies) UP12_RS09245 PF00132 Bacterial transferase hexapeptide (six repeats) UP12_RS09250 PF01554 MatE UP12_RS09255 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family UP12_RS09260 PF01095 Pectinesterase UP12_RS09265 PF04239 Protein of unknown function (DUF421) UP12_RS09270 PF00355 Rieske [2Fe-2S] domain UP12_RS09275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UP12_RS09275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UP12_RS09275 PF04324 BFD-like [2Fe-2S] binding domain UP12_RS09275 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS09280 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS09280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UP12_RS09285 PF00310 Glutamine amidotransferases class-II UP12_RS09285 PF01493 GXGXG motif UP12_RS09285 PF01645 Conserved region in glutamate synthase UP12_RS09285 PF04898 Glutamate synthase central domain UP12_RS09290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS09290 PF03466 LysR substrate binding domain UP12_RS09295 PF00005 ABC transporter UP12_RS09295 PF00664 ABC transporter transmembrane region UP12_RS09300 PF00005 ABC transporter UP12_RS09300 PF00664 ABC transporter transmembrane region UP12_RS09305 PF13411 MerR HTH family regulatory protein UP12_RS09310 PF00583 Acetyltransferase (GNAT) family UP12_RS09315 PF13302 Acetyltransferase (GNAT) domain UP12_RS09320 PF00171 Aldehyde dehydrogenase family UP12_RS09325 PF00696 Amino acid kinase family UP12_RS09325 PF01472 PUA domain UP12_RS09330 PF03807 NADP oxidoreductase coenzyme F420-dependent UP12_RS09330 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP12_RS09335 PF00067 Cytochrome P450 UP12_RS09340 PF00384 Molybdopterin oxidoreductase UP12_RS09340 PF01568 Molydopterin dinucleotide binding domain UP12_RS09340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UP12_RS09345 PF00457 Glycosyl hydrolases family 11 UP12_RS09350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UP12_RS09350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UP12_RS09355 PF01261 Xylose isomerase-like TIM barrel UP12_RS09360 PF00480 ROK family UP12_RS09360 PF13412 Winged helix-turn-helix DNA-binding UP12_RS09365 PF04616 Glycosyl hydrolases family 43 UP12_RS09365 PF07081 Protein of unknown function (DUF1349) UP12_RS09370 PF13347 MFS/sugar transport protein UP12_RS09375 PF01588 Putative tRNA binding domain UP12_RS09385 PF14158 UP12_RS09385 UP12_RS09390 PF13761 UP12_RS09390 UP12_RS09400 PF13305 WHG domain UP12_RS09405 PF00753 Metallo-beta-lactamase superfamily UP12_RS09410 PF14526 Integron-associated effector binding protein UP12_RS09415 PF08279 HTH domain UP12_RS09415 PF13280 UP12_RS09415 UP12_RS09425 PF01022 Bacterial regulatory protein, arsR family UP12_RS09430 PF00324 Amino acid permease UP12_RS09435 PF13702 Lysozyme-like UP12_RS09440 PF13714 Phosphoenolpyruvate phosphomutase UP12_RS09445 PF03972 MmgE/PrpD family UP12_RS09450 PF00285 Citrate synthase UP12_RS09455 PF04238 UP12_RS09455 UP12_RS09465 PF01476 LysM domain UP12_RS09465 PF06725 3D domain UP12_RS09470 PF00270 DEAD/DEAH box helicase UP12_RS09470 PF00271 Helicase conserved C-terminal domain UP12_RS09470 PF00570 HRDC domain UP12_RS09470 PF09382 RQC domain UP12_RS09470 PF16124 UP12_RS09470 UP12_RS09480 PF01258 Prokaryotic dksA/traR C4-type zinc finger UP12_RS09485 PF13460 NADH(P)-binding UP12_RS09490 PF08000 Bacterial PH domain UP12_RS09500 PF00171 Aldehyde dehydrogenase family UP12_RS09505 PF13243 Prenyltransferase-like UP12_RS09505 PF13249 Prenyltransferase-like UP12_RS09510 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UP12_RS09510 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UP12_RS09515 PF01758 Sodium Bile acid symporter family UP12_RS09520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP12_RS09520 PF00364 Biotin-requiring enzyme UP12_RS09520 PF02817 e3 binding domain UP12_RS09525 PF00676 Dehydrogenase E1 component UP12_RS09525 PF02779 Transketolase, pyrimidine binding domain UP12_RS09525 PF16078 UP12_RS09525 UP12_RS09525 PF16870 UP12_RS09525 UP12_RS09530 PF00092 von Willebrand factor type A domain UP12_RS09535 PF07728 AAA domain (dynein-related subfamily) UP12_RS09540 PF00080 Copper/zinc superoxide dismutase (SODC) UP12_RS09545 PF00877 NlpC/P60 family UP12_RS09545 PF01476 LysM domain UP12_RS09550 PF02457 DisA bacterial checkpoint controller nucleotide-binding UP12_RS09550 PF10372 Bacterial membrane-spanning protein N-terminus UP12_RS09555 PF01554 MatE UP12_RS09560 PF02585 GlcNAc-PI de-N-acetylase UP12_RS09565 PF08830 Protein of unknown function (DUF1806) UP12_RS09575 PF00892 EamA-like transporter family UP12_RS09590 PF01638 HxlR-like helix-turn-helix UP12_RS09595 PF00881 Nitroreductase family UP12_RS09600 PF11755 UP12_RS09600 UP12_RS09605 PF00474 Sodium:solute symporter family UP12_RS09610 PF00595 PDZ domain (Also known as DHR or GLGF) UP12_RS09610 PF01471 Putative peptidoglycan binding domain UP12_RS09610 PF03572 Peptidase family S41 UP12_RS09615 PF08241 Methyltransferase domain UP12_RS09625 PF02557 D-alanyl-D-alanine carboxypeptidase UP12_RS09630 PF01048 Phosphorylase superfamily UP12_RS09635 PF14191 UP12_RS09635 UP12_RS09640 PF01569 PAP2 superfamily UP12_RS09650 PF06855 Protein of unknown function (DUF1250) UP12_RS09655 PF14122 UP12_RS09655 UP12_RS09660 PF04055 Radical SAM superfamily UP12_RS09660 PF12544 Lysine-2,3-aminomutase UP12_RS09665 PF00158 Sigma-54 interaction domain UP12_RS09665 PF00989 PAS fold UP12_RS09665 PF02954 Bacterial regulatory protein, Fis family UP12_RS09670 PF00535 Glycosyl transferase family 2 UP12_RS09685 PF12996 UP12_RS09685 UP12_RS09685 PF13524 Glycosyl transferases group 1 UP12_RS09690 PF02348 Cytidylyltransferase UP12_RS09695 PF02719 Polysaccharide biosynthesis protein UP12_RS09700 PF01641 SelR domain UP12_RS09705 PF01625 Peptide methionine sulfoxide reductase UP12_RS09710 PF01047 MarR family UP12_RS09720 PF14344 UP12_RS09720 UP12_RS09730 PF09911 UP12_RS09730 UP12_RS09735 PF13472 GDSL-like Lipase/Acylhydrolase family UP12_RS09740 PF02630 SCO1/SenC UP12_RS09745 PF02645 Uncharacterised protein, DegV family COG1307 UP12_RS09750 PF10751 UP12_RS09750 UP12_RS09755 PF00291 Pyridoxal-phosphate dependent enzyme UP12_RS09755 PF00585 C-terminal regulatory domain of Threonine dehydratase UP12_RS09760 PF14532 Sigma-54 interaction domain UP12_RS09765 PF03006 UP12_RS09765 UP12_RS09775 PF00186 Dihydrofolate reductase UP12_RS09780 PF00303 Thymidylate synthase UP12_RS09785 PF04608 Phosphatidylglycerophosphatase A UP12_RS09790 PF14005 UP12_RS09790 UP12_RS09795 PF04445 Putative SAM-dependent methyltransferase UP12_RS09800 PF06491 Disulphide isomerase UP12_RS09805 PF00920 Dehydratase family UP12_RS09810 PF08712 Scaffold protein Nfu/NifU N terminal UP12_RS09810 PF13646 HEAT repeats UP12_RS09810 PF13769 UP12_RS09810 UP12_RS09815 PF01966 HD domain UP12_RS09820 PF00255 Glutathione peroxidase UP12_RS09825 PF01268 Formate--tetrahydrofolate ligase UP12_RS09830 PF04204 Homoserine O-succinyltransferase UP12_RS09835 PF00534 Glycosyl transferases group 1 UP12_RS09835 PF06925 UP12_RS09835 UP12_RS09840 PF01987 Mitochondrial biogenesis AIM24 UP12_RS09845 PF00313 'Cold-shock' DNA-binding domain UP12_RS09855 PF10782 UP12_RS09855 UP12_RS09860 PF13456 Reverse transcriptase-like UP12_RS09865 PF02592 UP12_RS09865 UP12_RS09870 PF13456 Reverse transcriptase-like UP12_RS09880 PF01367 5'-3' exonuclease, C-terminal SAM fold UP12_RS09880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UP12_RS09885 PF10752 UP12_RS09885 UP12_RS09890 PF00350 Dynamin family UP12_RS09895 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family UP12_RS09900 PF00195 Chalcone and stilbene synthases, N-terminal domain UP12_RS09900 PF02797 Chalcone and stilbene synthases, C-terminal domain UP12_RS09905 PF01522 Polysaccharide deacetylase UP12_RS09910 PF00860 Permease family UP12_RS09920 PF02074 Carboxypeptidase Taq (M32) metallopeptidase UP12_RS09925 PF13307 Helicase C-terminal domain UP12_RS09935 PF01170 Putative RNA methylase family UPF0020 UP12_RS09935 PF02926 THUMP domain UP12_RS09945 PF05103 DivIVA protein UP12_RS09950 PF06908 Protein of unknown function (DUF1273) UP12_RS09955 PF13482 RNase_H superfamily UP12_RS09960 PF00270 DEAD/DEAH box helicase UP12_RS09960 PF00271 Helicase conserved C-terminal domain UP12_RS09960 PF09369 UP12_RS09960 UP12_RS09965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UP12_RS09970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP12_RS09975 PF00011 Hsp20/alpha crystallin family UP12_RS09980 PF14179 UP12_RS09980 UP12_RS09985 PF08807 Bacterial domain of unknown function (DUF1798) UP12_RS10000 PF10720 UP12_RS10000 UP12_RS10005 PF03838 Recombination protein U UP12_RS10010 PF00905 Penicillin binding protein transpeptidase domain UP12_RS10010 PF00912 Transglycosylase UP12_RS10020 PF00633 Helix-hairpin-helix motif UP12_RS10020 PF00730 HhH-GPD superfamily base excision DNA repair protein UP12_RS10020 PF10576 Iron-sulfur binding domain of endonuclease III UP12_RS10025 PF07261 Replication initiation and membrane attachment UP12_RS10030 PF00152 tRNA synthetases class II (D, K and N) UP12_RS10030 PF01336 OB-fold nucleic acid binding domain UP12_RS10035 PF03413 Peptidase propeptide and YPEB domain UP12_RS10040 PF00929 Exonuclease UP12_RS10040 PF06733 DEAD_2 UP12_RS10040 PF13307 Helicase C-terminal domain UP12_RS10045 PF02261 Aspartate decarboxylase UP12_RS10050 PF02569 Pantoate-beta-alanine ligase UP12_RS10055 PF02548 Ketopantoate hydroxymethyltransferase UP12_RS10060 PF02237 Biotin protein ligase C terminal domain UP12_RS10060 PF03099 Biotin/lipoate A/B protein ligase family UP12_RS10060 PF08279 HTH domain UP12_RS10065 PF01743 Poly A polymerase head domain UP12_RS10065 PF12627 Probable RNA and SrmB- binding site of polymerase A UP12_RS10065 PF13735 tRNA nucleotidyltransferase domain 2 putative UP12_RS10070 PF00534 Glycosyl transferases group 1 UP12_RS10070 PF13439 Glycosyltransferase Family 4 UP12_RS10075 PF02585 GlcNAc-PI de-N-acetylase UP12_RS10080 PF02142 MGS-like domain UP12_RS10085 PF01113 Dihydrodipicolinate reductase, N-terminus UP12_RS10085 PF05173 Dihydrodipicolinate reductase, C-terminus UP12_RS10090 PF03819 MazG nucleotide pyrophosphohydrolase domain UP12_RS10095 PF02588 UP12_RS10095 UP12_RS10095 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP12_RS10100 PF09577 UP12_RS10100 UP12_RS10105 PF07187 UP12_RS10105 UP12_RS10110 PF00032 Cytochrome b(C-terminal)/b6/petD UP12_RS10110 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UP12_RS10115 PF00033 Cytochrome b(N-terminal)/b6/petB UP12_RS10120 PF00355 Rieske [2Fe-2S] domain UP12_RS10120 PF08802 Cytochrome B6-F complex Fe-S subunit UP12_RS10125 PF10673 UP12_RS10125 UP12_RS10130 PF08858 IDEAL domain UP12_RS10130 PF08864 UPF0302 domain UP12_RS10135 PF13429 Tetratricopeptide repeat UP12_RS10135 PF13432 Tetratricopeptide repeat UP12_RS10135 PF14559 Tetratricopeptide repeat UP12_RS10140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UP12_RS10145 PF01842 ACT domain UP12_RS10145 PF02153 Prephenate dehydrogenase UP12_RS10150 PF00155 Aminotransferase class I and II UP12_RS10155 PF00290 Tryptophan synthase alpha chain UP12_RS10160 PF00291 Pyridoxal-phosphate dependent enzyme UP12_RS10165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase UP12_RS10170 PF00218 Indole-3-glycerol phosphate synthase UP12_RS10175 PF00591 Glycosyl transferase family, a/b domain UP12_RS10175 PF02885 Glycosyl transferase family, helical bundle domain UP12_RS10180 PF00425 chorismate binding enzyme UP12_RS10180 PF04715 Anthranilate synthase component I, N terminal region UP12_RS10185 PF07736 Chorismate mutase type I UP12_RS10190 PF01761 3-dehydroquinate synthase UP12_RS10195 PF01264 Chorismate synthase UP12_RS10200 PF01739 CheR methyltransferase, SAM binding domain UP12_RS10200 PF03705 CheR methyltransferase, all-alpha domain UP12_RS10205 PF00334 Nucleoside diphosphate kinase UP12_RS10210 PF00348 Polyprenyl synthetase UP12_RS10215 PF01209 ubiE/COQ5 methyltransferase family UP12_RS10220 PF07307 UP12_RS10220 UP12_RS10225 PF02081 Tryptophan RNA-binding attenuator protein UP12_RS10230 PF01227 GTP cyclohydrolase I UP12_RS10235 PF00216 Bacterial DNA-binding protein UP12_RS10240 PF09547 UP12_RS10240 UP12_RS10250 PF10966 UP12_RS10250 UP12_RS10255 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UP12_RS10255 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus UP12_RS10260 PF01926 50S ribosome-binding GTPase UP12_RS10260 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UP12_RS10270 PF14045 UP12_RS10270 UP12_RS10280 PF01070 FMN-dependent dehydrogenase UP12_RS10285 PF00575 S1 RNA binding domain UP12_RS10290 PF02224 Cytidylate kinase UP12_RS10300 PF07238 PilZ domain UP12_RS10300 PF12945 Flagellar protein YcgR UP12_RS10305 PF03413 Peptidase propeptide and YPEB domain UP12_RS10305 PF14620 UP12_RS10305 UP12_RS10310 PF01471 Putative peptidoglycan binding domain UP12_RS10310 PF07486 Cell Wall Hydrolase UP12_RS10315 PF13367 UP12_RS10315 UP12_RS10320 PF13738 Pyridine nucleotide-disulphide oxidoreductase UP12_RS10325 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP12_RS10325 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP12_RS10330 PF05389 Negative regulator of genetic competence (MecA) UP12_RS10335 PF00149 Calcineurin-like phosphoesterase UP12_RS10340 PF10864 UP12_RS10340 UP12_RS10345 PF01476 LysM domain UP12_RS10350 PF02517 CAAX protease self-immunity UP12_RS10355 PF00270 DEAD/DEAH box helicase UP12_RS10355 PF00271 Helicase conserved C-terminal domain UP12_RS10360 PF14493 UP12_RS10360 UP12_RS10365 PF13370 4Fe-4S single cluster domain UP12_RS10370 PF12822 Protein of unknown function (DUF3816) UP12_RS10375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP12_RS10375 PF01842 ACT domain UP12_RS10375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP12_RS10380 PF01476 LysM domain UP12_RS10380 PF01551 Peptidase family M23 UP12_RS10390 PF04542 Sigma-70 region 2 UP12_RS10390 PF08281 Sigma-70, region 4 UP12_RS10395 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS10395 PF00672 HAMP domain UP12_RS10395 PF00989 PAS fold UP12_RS10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS10400 PF00072 Response regulator receiver domain UP12_RS10400 PF00486 Transcriptional regulatory protein, C terminal UP12_RS10405 PF01578 UP12_RS10405 UP12_RS10410 PF05140 UP12_RS10410 UP12_RS10415 PF00578 AhpC/TSA family UP12_RS10420 PF00849 RNA pseudouridylate synthase UP12_RS10420 PF01479 S4 domain UP12_RS10425 PF07670 Nucleoside recognition UP12_RS10430 PF07670 Nucleoside recognition UP12_RS10435 PF00768 D-alanyl-D-alanine carboxypeptidase UP12_RS10435 PF07943 Penicillin-binding protein 5, C-terminal domain UP12_RS10440 PF13047 UP12_RS10440 UP12_RS10445 PF04079 Putative transcriptional regulators (Ypuh-like) UP12_RS10450 PF02616 ScpA/B protein UP12_RS10455 PF03745 Domain of unknown function (DUF309) UP12_RS10460 PF13673 Acetyltransferase (GNAT) domain UP12_RS10465 PF00885 6,7-dimethyl-8-ribityllumazine synthase UP12_RS10470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UP12_RS10475 PF00677 Lumazine binding domain UP12_RS10485 PF09932 UP12_RS10485 UP12_RS10490 PF00440 Bacterial regulatory proteins, tetR family UP12_RS10495 PF07690 Major Facilitator Superfamily UP12_RS10500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UP12_RS10505 PF06207 UP12_RS10505 UP12_RS10510 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UP12_RS10510 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UP12_RS10515 PF03323 UP12_RS10515 UP12_RS10520 PF14097 UP12_RS10520 UP12_RS10525 PF03862 UP12_RS10525 UP12_RS10530 PF07451 Stage V sporulation protein AD (SpoVAD) UP12_RS10535 PF03862 UP12_RS10535 UP12_RS10540 PF13782 UP12_RS10540 UP12_RS10545 PF12164 Stage V sporulation protein AA UP12_RS10550 PF04539 Sigma-70 region 3 UP12_RS10550 PF04542 Sigma-70 region 2 UP12_RS10550 PF04545 Sigma-70, region 4 UP12_RS10555 PF13581 Histidine kinase-like ATPase domain UP12_RS10560 PF01740 STAS domain UP12_RS10565 PF00768 D-alanyl-D-alanine carboxypeptidase UP12_RS10565 PF07943 Penicillin-binding protein 5, C-terminal domain UP12_RS10570 PF01048 Phosphorylase superfamily UP12_RS10575 PF01676 Metalloenzyme superfamily UP12_RS10580 PF00589 Phage integrase family UP12_RS10580 PF02899 Phage integrase, N-terminal SAM-like domain UP12_RS10585 PF14004 UP12_RS10585 UP12_RS10590 PF01475 Ferric uptake regulator family UP12_RS10595 PF01944 UP12_RS10595 UP12_RS10600 PF00082 Subtilase family UP12_RS10610 PF13673 Acetyltransferase (GNAT) domain UP12_RS10615 PF13263 PHP-associated UP12_RS10620 PF00293 NUDIX domain UP12_RS10625 PF00248 Aldo/keto reductase family UP12_RS10630 PF01638 HxlR-like helix-turn-helix UP12_RS10635 PF02525 Flavodoxin-like fold UP12_RS10640 PF13025 UP12_RS10640 UP12_RS10645 PF00326 Prolyl oligopeptidase family UP12_RS10650 PF13424 Tetratricopeptide repeat UP12_RS10655 PF10827 UP12_RS10655 UP12_RS10660 PF01521 Iron-sulphur cluster biosynthesis UP12_RS10665 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel UP12_RS10670 PF04229 GrpB protein UP12_RS10670 PF13673 Acetyltransferase (GNAT) domain UP12_RS10675 PF00583 Acetyltransferase (GNAT) family UP12_RS10680 PF10787 UP12_RS10680 UP12_RS10685 PF00817 impB/mucB/samB family UP12_RS10685 PF11798 IMS family HHH motif UP12_RS10685 PF11799 impB/mucB/samB family C-terminal domain UP12_RS10690 PF08863 UP12_RS10690 UP12_RS10695 PF07690 Major Facilitator Superfamily UP12_RS10700 PF00485 Phosphoribulokinase / Uridine kinase family UP12_RS10705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP12_RS10705 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS10710 PF00106 short chain dehydrogenase UP12_RS10715 PF00753 Metallo-beta-lactamase superfamily UP12_RS10720 PF03807 NADP oxidoreductase coenzyme F420-dependent UP12_RS10720 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP12_RS10725 PF12867 DinB superfamily UP12_RS10730 PF01546 Peptidase family M20/M25/M40 UP12_RS10735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UP12_RS10740 PF00561 alpha/beta hydrolase fold UP12_RS10745 PF12897 Alanine-glyoxylate amino-transferase UP12_RS10750 PF12706 Beta-lactamase superfamily domain UP12_RS10755 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain UP12_RS10755 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain UP12_RS10760 PF00392 Bacterial regulatory proteins, gntR family UP12_RS10760 PF07702 UTRA domain UP12_RS10765 PF00232 Glycosyl hydrolase family 1 UP12_RS10770 PF02378 Phosphotransferase system, EIIC UP12_RS10775 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit UP12_RS10780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS10785 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS10790 PF06800 UP12_RS10790 UP12_RS10795 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain UP12_RS10795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP12_RS10800 PF00817 impB/mucB/samB family UP12_RS10800 PF11798 IMS family HHH motif UP12_RS10800 PF11799 impB/mucB/samB family C-terminal domain UP12_RS10805 PF00795 Carbon-nitrogen hydrolase UP12_RS10815 PF02096 60Kd inner membrane protein UP12_RS10820 PF01584 CheW-like domain UP12_RS10825 PF01546 Peptidase family M20/M25/M40 UP12_RS10825 PF07687 Peptidase dimerisation domain UP12_RS10830 PF01039 Carboxyl transferase domain UP12_RS10835 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS10840 PF03734 L,D-transpeptidase catalytic domain UP12_RS10845 PF06081 UP12_RS10845 UP12_RS10845 PF11728 DUF939 C-terminal domain UP12_RS10850 PF00005 ABC transporter UP12_RS10855 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS10860 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP12_RS10865 PF06491 Disulphide isomerase UP12_RS10870 PF00781 Diacylglycerol kinase catalytic domain UP12_RS10875 PF14150 UP12_RS10875 UP12_RS10880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP12_RS10880 PF00364 Biotin-requiring enzyme UP12_RS10880 PF02817 e3 binding domain UP12_RS10885 PF02779 Transketolase, pyrimidine binding domain UP12_RS10885 PF02780 Transketolase, C-terminal domain UP12_RS10890 PF00676 Dehydrogenase E1 component UP12_RS10895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP12_RS10895 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS10900 PF00871 Acetokinase family UP12_RS10905 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP12_RS10905 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP12_RS10910 PF01515 Phosphate acetyl/butaryl transferase UP12_RS10915 PF00158 Sigma-54 interaction domain UP12_RS10915 PF00989 PAS fold UP12_RS10915 PF02954 Bacterial regulatory protein, Fis family UP12_RS10920 PF11118 UP12_RS10920 UP12_RS10925 PF03009 Glycerophosphoryl diester phosphodiesterase family UP12_RS10940 PF00072 Response regulator receiver domain UP12_RS10940 PF08769 Sporulation initiation factor Spo0A C terminal UP12_RS10945 PF00595 PDZ domain (Also known as DHR or GLGF) UP12_RS10945 PF05580 UP12_RS10945 UP12_RS10950 PF02463 RecF/RecN/SMC N terminal domain UP12_RS10955 PF01316 Arginine repressor, DNA binding domain UP12_RS10955 PF02863 Arginine repressor, C-terminal domain UP12_RS10960 PF01479 S4 domain UP12_RS10960 PF01728 FtsJ-like methyltransferase UP12_RS10965 PF02779 Transketolase, pyrimidine binding domain UP12_RS10965 PF02780 Transketolase, C-terminal domain UP12_RS10965 PF13292 1-deoxy-D-xylulose-5-phosphate synthase UP12_RS10970 PF00348 Polyprenyl synthetase UP12_RS10975 PF02609 Exonuclease VII small subunit UP12_RS10980 PF02601 UP12_RS10980 UP12_RS10980 PF13742 UP12_RS10980 UP12_RS10985 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UP12_RS10985 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UP12_RS10990 PF01029 NusB family UP12_RS10995 PF03780 UP12_RS10995 UP12_RS11000 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain UP12_RS11000 PF02785 Biotin carboxylase C-terminal domain UP12_RS11000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP12_RS11005 PF00364 Biotin-requiring enzyme UP12_RS11010 PF12685 SpoIIIAH-like protein UP12_RS11020 PF09581 UP12_RS11020 UP12_RS11025 PF09546 UP12_RS11025 UP12_RS11030 PF06686 UP12_RS11030 UP12_RS11035 PF06686 UP12_RS11035 UP12_RS11040 PF09548 UP12_RS11040 UP12_RS11050 PF10942 UP12_RS11050 UP12_RS11055 PF01132 Elongation factor P (EF-P) OB domain UP12_RS11055 PF08207 Elongation factor P (EF-P) KOW-like domain UP12_RS11055 PF09285 Elongation factor P, C-terminal UP12_RS11060 PF00557 Metallopeptidase family M24 UP12_RS11060 PF01321 Creatinase/Prolidase N-terminal domain UP12_RS11065 PF01220 Dehydroquinase class II UP12_RS11070 PF11085 UP12_RS11070 UP12_RS11075 PF07136 UP12_RS11075 UP12_RS11085 PF01734 Patatin-like phospholipase UP12_RS11090 PF01325 Iron dependent repressor, N-terminal DNA binding domain UP12_RS11090 PF02742 Iron dependent repressor, metal binding and dimerisation domain UP12_RS11095 PF03099 Biotin/lipoate A/B protein ligase family UP12_RS11100 PF00581 Rhodanese-like domain UP12_RS11105 PF02347 Glycine cleavage system P-protein UP12_RS11110 PF02347 Glycine cleavage system P-protein UP12_RS11115 PF01571 Aminomethyltransferase folate-binding domain UP12_RS11115 PF08669 Glycine cleavage T-protein C-terminal barrel domain UP12_RS11120 PF00176 SNF2 family N-terminal domain UP12_RS11120 PF00271 Helicase conserved C-terminal domain UP12_RS11125 PF11079 UP12_RS11125 UP12_RS11130 PF01381 Helix-turn-helix UP12_RS11130 PF08671 Anti-repressor SinI UP12_RS11135 PF12389 UP12_RS11135 UP12_RS11140 PF00717 Peptidase S24-like UP12_RS11150 PF13028 Protein of unknown function (DUF3889) UP12_RS11155 PF14038 UP12_RS11155 UP12_RS11160 PF14173 UP12_RS11160 UP12_RS11165 PF15980 UP12_RS11165 UP12_RS11180 PF13633 Prokaryotic N-terminal methylation site UP12_RS11185 PF00482 Type II secretion system (T2SS), protein F UP12_RS11190 PF00437 Type II/IV secretion system protein UP12_RS11200 PF01740 STAS domain UP12_RS11210 PF03960 ArsC family UP12_RS11215 PF11117 UP12_RS11215 UP12_RS11220 PF00753 Metallo-beta-lactamase superfamily UP12_RS11225 PF01910 Domain of unknown function DUF77 UP12_RS11230 PF07690 Major Facilitator Superfamily UP12_RS11235 PF00246 Zinc carboxypeptidase UP12_RS11240 PF00884 Sulfatase UP12_RS11245 PF00480 ROK family UP12_RS11250 PF06014 Bacterial protein of unknown function (DUF910) UP12_RS11255 PF01694 Rhomboid family UP12_RS11255 PF14559 Tetratricopeptide repeat UP12_RS11265 PF01812 5-formyltetrahydrofolate cyclo-ligase family UP12_RS11270 PF00471 Ribosomal protein L33 UP12_RS11280 PF02618 YceG-like family UP12_RS11285 PF00005 ABC transporter UP12_RS11290 PF00005 ABC transporter UP12_RS11295 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS11300 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS11305 PF12849 PBP superfamily domain UP12_RS11310 PF00905 Penicillin binding protein transpeptidase domain UP12_RS11310 PF03717 Penicillin-binding Protein dimerisation domain UP12_RS11315 PF07690 Major Facilitator Superfamily UP12_RS11320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UP12_RS11320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UP12_RS11325 PF04306 UP12_RS11325 UP12_RS11330 PF06691 UP12_RS11330 UP12_RS11335 PF13302 Acetyltransferase (GNAT) domain UP12_RS11345 PF04551 GcpE protein UP12_RS11350 PF06781 UP12_RS11350 UP12_RS11355 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) UP12_RS11360 PF00480 ROK family UP12_RS11365 PF01475 Ferric uptake regulator family UP12_RS11370 PF00950 UP12_RS11370 UP12_RS11375 PF00005 ABC transporter UP12_RS11380 PF02588 UP12_RS11380 UP12_RS11380 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP12_RS11385 PF11116 UP12_RS11385 UP12_RS11390 PF01261 Xylose isomerase-like TIM barrel UP12_RS11395 PF00270 DEAD/DEAH box helicase UP12_RS11395 PF00271 Helicase conserved C-terminal domain UP12_RS11400 PF14181 UP12_RS11400 UP12_RS11405 PF02401 LytB protein UP12_RS11410 PF01784 NIF3 (NGG1p interacting factor 3) UP12_RS11415 PF04816 Family of unknown function (DUF633) UP12_RS11420 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UP12_RS11425 PF00140 Sigma-70 factor, region 1 UP12_RS11425 PF03979 Sigma-70 factor, region 1 UP12_RS11425 PF04539 Sigma-70 region 3 UP12_RS11425 PF04542 Sigma-70 region 2 UP12_RS11425 PF04545 Sigma-70, region 4 UP12_RS11430 PF01807 CHC2 zinc finger UP12_RS11430 PF08275 DNA primase catalytic core, N-terminal domain UP12_RS11430 PF10410 DnaB-helicase binding domain of primase UP12_RS11430 PF13155 Toprim-like UP12_RS11435 PF02639 UP12_RS11435 UP12_RS11440 PF03618 UP12_RS11440 UP12_RS11445 PF00571 CBS domain UP12_RS11445 PF08279 HTH domain UP12_RS11450 PF02092 UP12_RS11450 UP12_RS11450 PF05746 DALR anticodon binding domain UP12_RS11455 PF02091 Glycyl-tRNA synthetase alpha subunit UP12_RS11460 PF02565 Recombination protein O C terminal UP12_RS11460 PF11967 Recombination protein O N terminal UP12_RS11465 PF01926 50S ribosome-binding GTPase UP12_RS11465 PF07650 KH domain UP12_RS11470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP12_RS11475 PF01219 Prokaryotic diacylglycerol kinase UP12_RS11480 PF02130 Uncharacterized protein family UPF0054 UP12_RS11485 PF01966 HD domain UP12_RS11485 PF07697 UP12_RS11485 UP12_RS11485 PF07698 UP12_RS11485 UP12_RS11490 PF02562 PhoH-like protein UP12_RS11495 PF06898 UP12_RS11495 UP12_RS11500 PF07873 YabP family UP12_RS11510 PF12127 UP12_RS11510 UP12_RS11515 PF01957 NfeD-like C-terminal, partner-binding UP12_RS11515 PF01972 Serine dehydrogenase proteinase UP12_RS11520 PF09424 Yqey-like protein UP12_RS11525 PF01165 Ribosomal protein S21 UP12_RS11530 PF02690 UP12_RS11530 UP12_RS11535 PF00919 Uncharacterized protein family UPF0004 UP12_RS11535 PF01938 TRAM domain UP12_RS11535 PF04055 Radical SAM superfamily UP12_RS11540 PF04452 RNA methyltransferase UP12_RS11545 PF06325 Ribosomal protein L11 methyltransferase (PrmA) UP12_RS11550 PF00226 DnaJ domain UP12_RS11550 PF00684 DnaJ central domain UP12_RS11550 PF01556 DnaJ C terminal domain UP12_RS11555 PF00012 Hsp70 protein UP12_RS11560 PF01025 GrpE UP12_RS11565 PF01628 HrcA protein C terminal domain UP12_RS11570 PF04055 Radical SAM superfamily UP12_RS11570 PF06969 HemN C-terminal domain UP12_RS11575 PF00009 Elongation factor Tu GTP binding domain UP12_RS11575 PF00679 Elongation factor G C-terminus UP12_RS11575 PF03144 Elongation factor Tu domain 2 UP12_RS11575 PF06421 GTP-binding protein LepA C-terminus UP12_RS11580 PF12438 UP12_RS11580 UP12_RS11585 PF07454 UP12_RS11585 UP12_RS11590 PF03418 Germination protease UP12_RS11595 PF01649 Ribosomal protein S20 UP12_RS11600 PF06144 DNA polymerase III, delta subunit UP12_RS11605 PF00753 Metallo-beta-lactamase superfamily UP12_RS11605 PF03772 UP12_RS11605 UP12_RS11605 PF13567 UP12_RS11605 UP12_RS11610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP12_RS11615 PF10531 SLBB domain UP12_RS11615 PF12836 Helix-hairpin-helix motif UP12_RS11620 PF03807 NADP oxidoreductase coenzyme F420-dependent UP12_RS11620 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP12_RS11625 PF13649 Methyltransferase domain UP12_RS11630 PF02410 Oligomerisation domain UP12_RS11635 PF01966 HD domain UP12_RS11640 PF01467 Cytidylyltransferase UP12_RS11645 PF01985 CRS1 / YhbY (CRM) domain UP12_RS11650 PF01488 Shikimate / quinate 5-dehydrogenase UP12_RS11650 PF08501 Shikimate dehydrogenase substrate binding domain UP12_RS11655 PF01926 50S ribosome-binding GTPase UP12_RS11660 PF13419 Haloacid dehalogenase-like hydrolase UP12_RS11665 PF08970 Sporulation inhibitor A UP12_RS11670 PF13472 GDSL-like Lipase/Acylhydrolase family UP12_RS11675 PF01522 Polysaccharide deacetylase UP12_RS11680 PF13181 Tetratricopeptide repeat UP12_RS11685 PF04542 Sigma-70 region 2 UP12_RS11685 PF04545 Sigma-70, region 4 UP12_RS11690 PF13143 UP12_RS11690 UP12_RS11695 PF14430 UP12_RS11695 UP12_RS11700 PF00293 NUDIX domain UP12_RS11710 PF01522 Polysaccharide deacetylase UP12_RS11710 PF13739 Domain of unknown function (DUF4163) UP12_RS11720 PF00583 Acetyltransferase (GNAT) family UP12_RS11725 PF11122 UP12_RS11725 UP12_RS11735 PF00083 Sugar (and other) transporter UP12_RS11740 PF02610 L-arabinose isomerase UP12_RS11740 PF11762 L-arabinose isomerase C-terminal domain UP12_RS11745 PF00596 Class II Aldolase and Adducin N-terminal domain UP12_RS11750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UP12_RS11750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UP12_RS11755 PF00392 Bacterial regulatory proteins, gntR family UP12_RS11755 PF13377 Periplasmic binding protein-like domain UP12_RS11760 PF01323 DSBA-like thioredoxin domain UP12_RS11765 PF01380 SIS domain UP12_RS11770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UP12_RS11775 PF01638 HxlR-like helix-turn-helix UP12_RS11780 PF07859 alpha/beta hydrolase fold UP12_RS11795 PF00905 Penicillin binding protein transpeptidase domain UP12_RS11800 PF02770 Acyl-CoA dehydrogenase, middle domain UP12_RS11800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP12_RS11800 PF08028 Acyl-CoA dehydrogenase, C-terminal domain UP12_RS11805 PF00005 ABC transporter UP12_RS11810 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP12_RS11815 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS11820 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS11825 PF05067 Manganese containing catalase UP12_RS11830 PF00107 Zinc-binding dehydrogenase UP12_RS11830 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS11835 PF07690 Major Facilitator Superfamily UP12_RS11840 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS11845 PF00465 Iron-containing alcohol dehydrogenase UP12_RS11850 PF01235 UP12_RS11850 UP12_RS11855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS11855 PF03466 LysR substrate binding domain UP12_RS11860 PF00107 Zinc-binding dehydrogenase UP12_RS11860 PF08240 Alcohol dehydrogenase GroES-like domain UP12_RS11865 PF08241 Methyltransferase domain UP12_RS11870 PF14143 UP12_RS11870 UP12_RS11875 PF01053 Cys/Met metabolism PLP-dependent enzyme UP12_RS11880 PF00291 Pyridoxal-phosphate dependent enzyme UP12_RS11885 PF01048 Phosphorylase superfamily UP12_RS11890 PF13489 Methyltransferase domain UP12_RS11895 PF10750 UP12_RS11895 UP12_RS11900 PF07423 UP12_RS11900 UP12_RS11905 PF00905 Penicillin binding protein transpeptidase domain UP12_RS11905 PF03717 Penicillin-binding Protein dimerisation domain UP12_RS11910 PF01272 Transcription elongation factor, GreA/GreB, C-term UP12_RS11910 PF03449 Transcription elongation factor, N-terminal UP12_RS11915 PF02368 Bacterial Ig-like domain (group 2) UP12_RS11920 PF00485 Phosphoribulokinase / Uridine kinase family UP12_RS11925 PF01136 UP12_RS11925 UP12_RS11925 PF16325 UP12_RS11925 UP12_RS11930 PF01136 UP12_RS11930 UP12_RS11935 PF01596 O-methyltransferase UP12_RS11940 PF02618 YceG-like family UP12_RS11945 PF00108 Thiolase, N-terminal domain UP12_RS11945 PF02803 Thiolase, C-terminal domain UP12_RS11950 PF00501 AMP-binding enzyme UP12_RS11950 PF13193 AMP-binding enzyme C-terminal domain UP12_RS11955 PF02632 BioY family UP12_RS11960 PF06949 UP12_RS11960 UP12_RS11965 PF03652 Uncharacterised protein family (UPF0081) UP12_RS11970 PF06135 UP12_RS11970 UP12_RS11975 PF01411 tRNA synthetases class II (A) UP12_RS11975 PF02272 DHHA1 domain UP12_RS11975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UP12_RS11980 PF01594 UP12_RS11980 UP12_RS11985 PF00005 ABC transporter UP12_RS11990 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP12_RS11995 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS12000 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS12015 PF13538 UvrD-like helicase C-terminal domain UP12_RS12015 PF13604 AAA domain UP12_RS12015 PF14490 Helix-hairpin-helix containing domain UP12_RS12020 PF00515 Tetratricopeptide repeat UP12_RS12020 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 UP12_RS12020 PF14559 Tetratricopeptide repeat UP12_RS12025 PF03054 tRNA methyl transferase UP12_RS12030 PF00266 Aminotransferase class-V UP12_RS12035 PF02082 Transcriptional regulator UP12_RS12040 PF05496 Holliday junction DNA helicase ruvB N-terminus UP12_RS12040 PF12002 MgsA AAA+ ATPase C terminal UP12_RS12040 PF16193 UP12_RS12040 UP12_RS12045 PF00899 ThiF family UP12_RS12055 PF00152 tRNA synthetases class II (D, K and N) UP12_RS12055 PF01336 OB-fold nucleic acid binding domain UP12_RS12055 PF02938 GAD domain UP12_RS12060 PF03129 Anticodon binding domain UP12_RS12060 PF13393 Histidyl-tRNA synthetase UP12_RS12065 PF01520 N-acetylmuramoyl-L-alanine amidase UP12_RS12065 PF08239 Bacterial SH3 domain UP12_RS12070 PF02580 D-Tyr-tRNA(Tyr) deacylase UP12_RS12075 PF02824 TGS domain UP12_RS12075 PF04607 Region found in RelA / SpoT proteins UP12_RS12075 PF13291 ACT domain UP12_RS12075 PF13328 HD domain UP12_RS12080 PF00156 Phosphoribosyl transferase domain UP12_RS12085 PF01368 DHH family UP12_RS12085 PF02272 DHHA1 domain UP12_RS12085 PF10141 UP12_RS12085 UP12_RS12090 PF06305 UP12_RS12090 UP12_RS12095 PF02080 TrkA-C domain UP12_RS12100 PF02355 Protein export membrane protein UP12_RS12100 PF07549 SecD/SecF GG Motif UP12_RS12105 PF13797 UP12_RS12105 UP12_RS12110 PF01943 UP12_RS12110 UP12_RS12110 PF14667 Polysaccharide biosynthesis C-terminal domain UP12_RS12115 PF04239 Protein of unknown function (DUF421) UP12_RS12120 PF12670 UP12_RS12120 UP12_RS12125 PF02699 Preprotein translocase subunit UP12_RS12130 PF01702 Queuine tRNA-ribosyltransferase UP12_RS12135 PF02547 Queuosine biosynthesis protein UP12_RS12140 PF11146 UP12_RS12140 UP12_RS12145 PF05491 Holliday junction DNA helicase ruvB C-terminus UP12_RS12145 PF05496 Holliday junction DNA helicase ruvB N-terminus UP12_RS12150 PF01330 RuvA N terminal domain UP12_RS12150 PF07499 RuvA, C-terminal domain UP12_RS12150 PF14520 Helix-hairpin-helix domain UP12_RS12155 PF08955 BofC C-terminal domain UP12_RS12155 PF08977 Bypass of Forespore C, N terminal UP12_RS12170 PF01964 ThiC family UP12_RS12170 PF13667 ThiC-associated domain UP12_RS12175 PF01810 UP12_RS12175 UP12_RS12180 PF09580 UP12_RS12180 UP12_RS12185 PF01476 LysM domain UP12_RS12190 PF02445 Quinolinate synthetase A protein UP12_RS12195 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain UP12_RS12195 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain UP12_RS12200 PF00890 FAD binding domain UP12_RS12200 PF02910 Fumarate reductase flavoprotein C-term UP12_RS12205 PF00266 Aminotransferase class-V UP12_RS12210 PF02829 3H domain UP12_RS12210 PF08279 HTH domain UP12_RS12215 PF00800 Prephenate dehydratase UP12_RS12215 PF01842 ACT domain UP12_RS12220 PF01842 ACT domain UP12_RS12225 PF01018 GTP1/OBG UP12_RS12225 PF01926 50S ribosome-binding GTPase UP12_RS12225 PF09269 Domain of unknown function (DUF1967) UP12_RS12230 PF14682 Sporulation initiation phospho-transferase B, C-terminal UP12_RS12230 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP12_RS12235 PF01016 Ribosomal L27 protein UP12_RS12240 PF04327 Protein of unknown function (DUF464) UP12_RS12245 PF00829 Ribosomal prokaryotic L21 protein UP12_RS12250 PF02163 Peptidase family M50 UP12_RS12255 PF01551 Peptidase family M23 UP12_RS12260 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UP12_RS12265 PF03775 Septum formation inhibitor MinC, C-terminal domain UP12_RS12270 PF04093 UP12_RS12270 UP12_RS12275 PF04085 rod shape-determining protein MreC UP12_RS12280 PF06723 MreB/Mbl protein UP12_RS12285 PF04002 RadC-like JAB domain UP12_RS12290 PF02545 Maf-like protein UP12_RS12295 PF05036 Sporulation related domain UP12_RS12300 PF01478 Type IV leader peptidase family UP12_RS12300 PF06750 UP12_RS12300 UP12_RS12305 PF02875 Mur ligase family, glutamate ligase domain UP12_RS12305 PF08245 Mur ligase middle domain UP12_RS12310 PF00133 tRNA synthetases class I (I, L, M and V) UP12_RS12310 PF08264 Anticodon-binding domain of tRNA UP12_RS12310 PF10458 Valyl tRNA synthetase tRNA binding arm UP12_RS12325 PF01476 LysM domain UP12_RS12330 PF00202 Aminotransferase class-III UP12_RS12335 PF00490 Delta-aminolevulinic acid dehydratase UP12_RS12340 PF02602 Uroporphyrinogen-III synthase HemD UP12_RS12345 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain UP12_RS12345 PF03900 Porphobilinogen deaminase, C-terminal domain UP12_RS12350 PF01578 UP12_RS12350 UP12_RS12355 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain UP12_RS12355 PF01488 Shikimate / quinate 5-dehydrogenase UP12_RS12355 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain UP12_RS12365 PF01926 50S ribosome-binding GTPase UP12_RS12370 PF00004 ATPase family associated with various cellular activities (AAA) UP12_RS12370 PF02190 ATP-dependent protease La (LON) domain UP12_RS12370 PF05362 Lon protease (S16) C-terminal proteolytic domain UP12_RS12375 PF00004 ATPase family associated with various cellular activities (AAA) UP12_RS12375 PF05362 Lon protease (S16) C-terminal proteolytic domain UP12_RS12380 PF06689 ClpX C4-type zinc finger UP12_RS12380 PF07724 AAA domain (Cdc48 subfamily) UP12_RS12380 PF10431 C-terminal, D2-small domain, of ClpB protein UP12_RS12385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UP12_RS12385 PF05697 Bacterial trigger factor protein (TF) UP12_RS12385 PF05698 Bacterial trigger factor protein (TF) C-terminus UP12_RS12390 PF14559 Tetratricopeptide repeat UP12_RS12395 PF00694 Aconitase C-terminal domain UP12_RS12400 PF00330 Aconitase family (aconitate hydratase) UP12_RS12405 PF00180 Isocitrate/isopropylmalate dehydrogenase UP12_RS12410 PF00682 HMGL-like UP12_RS12410 PF08502 LeuA allosteric (dimerisation) domain UP12_RS12415 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain UP12_RS12415 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain UP12_RS12420 PF01842 ACT domain UP12_RS12420 PF10369 Small subunit of acetolactate synthase UP12_RS12425 PF00205 Thiamine pyrophosphate enzyme, central domain UP12_RS12425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP12_RS12425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP12_RS12430 PF01063 Aminotransferase class IV UP12_RS12435 PF10282 Lactonase, 7-bladed beta-propeller UP12_RS12440 PF06803 UP12_RS12440 UP12_RS12445 PF04914 DltD C-terminal region UP12_RS12445 PF04915 DltD N-terminal region UP12_RS12445 PF04918 DltD central region UP12_RS12450 PF00550 Phosphopantetheine attachment site UP12_RS12455 PF03062 UP12_RS12455 UP12_RS12460 PF00501 AMP-binding enzyme UP12_RS12460 PF13193 AMP-binding enzyme C-terminal domain UP12_RS12470 PF14449 UP12_RS12470 UP12_RS12470 PF15657 UP12_RS12470 UP12_RS12475 PF15594 UP12_RS12475 UP12_RS12485 PF14449 UP12_RS12485 UP12_RS12485 PF15542 UP12_RS12485 UP12_RS12505 PF12850 Calcineurin-like phosphoesterase superfamily domain UP12_RS12510 PF01725 Ham1 family UP12_RS12515 PF01138 3' exoribonuclease family, domain 1 UP12_RS12515 PF03725 3' exoribonuclease family, domain 2 UP12_RS12520 PF10646 UP12_RS12520 UP12_RS12525 PF01177 Asp/Glu/Hydantoin racemase UP12_RS12530 PF01047 MarR family UP12_RS12535 PF00239 Resolvase, N terminal domain UP12_RS12535 PF07508 Recombinase UP12_RS12535 PF13408 Recombinase zinc beta ribbon domain UP12_RS12555 PF01520 N-acetylmuramoyl-L-alanine amidase UP12_RS12560 PF05105 UP12_RS12560 UP12_RS12565 PF09693 UP12_RS12565 UP12_RS12570 PF10651 Domain of unknown function (DUF2479) UP12_RS12575 PF13229 Right handed beta helix region UP12_RS12580 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase UP12_RS12580 PF06605 Prophage endopeptidase tail UP12_RS12585 PF05709 Phage tail protein UP12_RS12590 PF01464 Transglycosylase SLT domain UP12_RS12590 PF10145 UP12_RS12590 UP12_RS12600 PF04630 UP12_RS12600 UP12_RS12605 PF11367 Protein of unknown function (DUF3168) UP12_RS12610 PF04883 UP12_RS12610 UP12_RS12615 PF05521 Phage head-tail joining protein UP12_RS12620 PF05135 Phage gp6-like head-tail connector protein UP12_RS12625 PF01391 Collagen triple helix repeat (20 copies) UP12_RS12630 PF05065 Phage capsid family UP12_RS12635 PF04586 UP12_RS12635 UP12_RS12640 PF04860 Phage portal protein UP12_RS12650 PF03354 UP12_RS12650 UP12_RS12655 PF05119 UP12_RS12655 UP12_RS12660 PF01844 HNH endonuclease UP12_RS12675 PF12476 UP12_RS12675 UP12_RS12675 PF13175 AAA ATPase domain UP12_RS12690 PF00589 Phage integrase family UP12_RS12695 PF07374 UP12_RS12695 UP12_RS12705 PF02274 Amidinotransferase UP12_RS12730 PF01555 DNA methylase UP12_RS12735 PF00145 C-5 cytosine-specific DNA methylase UP12_RS12755 PF01695 IstB-like ATP binding protein UP12_RS12760 PF09524 UP12_RS12760 UP12_RS12765 PF12844 Helix-turn-helix domain UP12_RS12770 PF01381 Helix-turn-helix UP12_RS12780 PF00196 Bacterial regulatory proteins, luxR family UP12_RS12785 PF03600 Citrate transporter UP12_RS12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS12790 PF03466 LysR substrate binding domain UP12_RS12795 PF04303 PrpF protein UP12_RS12800 PF03099 Biotin/lipoate A/B protein ligase family UP12_RS12805 PF03061 Thioesterase superfamily UP12_RS12810 PF13085 2Fe-2S iron-sulfur cluster binding domain UP12_RS12810 PF13183 4Fe-4S dicluster domain UP12_RS12815 PF00890 FAD binding domain UP12_RS12815 PF02910 Fumarate reductase flavoprotein C-term UP12_RS12820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UP12_RS12825 PF10702 Protein of unknown function (DUF2507) UP12_RS12830 PF00696 Amino acid kinase family UP12_RS12830 PF13840 ACT domain UP12_RS12835 PF01541 GIY-YIG catalytic domain UP12_RS12835 PF02151 UvrB/uvrC motif UP12_RS12835 PF08459 UvrC Helix-hairpin-helix N-terminal UP12_RS12835 PF14520 Helix-hairpin-helix domain UP12_RS12840 PF00085 Thioredoxin UP12_RS12845 PF06964 Alpha-L-arabinofuranosidase C-terminus UP12_RS12850 PF00766 Electron transfer flavoprotein FAD-binding domain UP12_RS12850 PF01012 Electron transfer flavoprotein domain UP12_RS12855 PF01012 Electron transfer flavoprotein domain UP12_RS12860 PF00378 Enoyl-CoA hydratase/isomerase family UP12_RS12865 PF00440 Bacterial regulatory proteins, tetR family UP12_RS12865 PF08359 YsiA-like protein, C-terminal region UP12_RS12870 PF00501 AMP-binding enzyme UP12_RS12870 PF13193 AMP-binding enzyme C-terminal domain UP12_RS12875 PF15599 UP12_RS12875 UP12_RS12880 PF03994 UP12_RS12880 UP12_RS12885 PF00488 MutS domain V UP12_RS12885 PF01713 Smr domain UP12_RS12890 PF02811 PHP domain UP12_RS12890 PF14520 Helix-hairpin-helix domain UP12_RS12890 PF14716 Helix-hairpin-helix domain UP12_RS12890 PF14791 DNA polymerase beta thumb UP12_RS12895 PF02674 UP12_RS12895 UP12_RS12900 PF05164 Cell division protein ZapA UP12_RS12905 PF01351 Ribonuclease HII UP12_RS12905 PF11858 Domain of unknown function (DUF3378) UP12_RS12910 PF01588 Putative tRNA binding domain UP12_RS12910 PF03147 Ferredoxin-fold anticodon binding domain UP12_RS12910 PF03483 B3/4 domain UP12_RS12910 PF03484 tRNA synthetase B5 domain UP12_RS12915 PF01409 tRNA synthetases class II core domain (F) UP12_RS12915 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain UP12_RS12920 PF00588 SpoU rRNA Methylase family UP12_RS12920 PF08032 RNA 2'-O ribose methyltransferase substrate binding UP12_RS12925 PF14098 UP12_RS12925 UP12_RS12930 PF02554 UP12_RS12930 UP12_RS12930 PF13722 UP12_RS12930 UP12_RS12935 PF05343 M42 glutamyl aminopeptidase UP12_RS12945 PF06961 UP12_RS12945 UP12_RS12950 PF00453 Ribosomal protein L20 UP12_RS12955 PF01632 Ribosomal protein L35 UP12_RS12960 PF00707 Translation initiation factor IF-3, C-terminal domain UP12_RS12960 PF05198 Translation initiation factor IF-3, N-terminal domain UP12_RS12965 PF04172 UP12_RS12965 UP12_RS12970 PF03788 UP12_RS12970 UP12_RS12975 PF00072 Response regulator receiver domain UP12_RS12975 PF04397 LytTr DNA-binding domain UP12_RS12980 PF01590 GAF domain UP12_RS12980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS12980 PF06580 UP12_RS12980 UP12_RS12980 PF07694 5TMR of 5TMR-LYT UP12_RS12985 PF13419 Haloacid dehalogenase-like hydrolase UP12_RS12990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS12990 PF13426 PAS domain UP12_RS12995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP12_RS12995 PF02824 TGS domain UP12_RS12995 PF03129 Anticodon binding domain UP12_RS12995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UP12_RS13000 PF08812 UP12_RS13000 UP12_RS13005 PF09335 UP12_RS13005 UP12_RS13010 PF01695 IstB-like ATP binding protein UP12_RS13010 PF07319 Primosomal protein DnaI N-terminus UP12_RS13015 PF07261 Replication initiation and membrane attachment UP12_RS13020 PF03477 ATP cone domain UP12_RS13030 PF02675 S-adenosylmethionine decarboxylase UP12_RS13035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UP12_RS13035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UP12_RS13040 PF01121 Dephospho-CoA kinase UP12_RS13045 PF02659 UP12_RS13045 UP12_RS13050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain UP12_RS13050 PF06827 Zinc finger found in FPG and IleRS UP12_RS13050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UP12_RS13055 PF00476 DNA polymerase family A UP12_RS13055 PF01367 5'-3' exonuclease, C-terminal SAM fold UP12_RS13055 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UP12_RS13060 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS13060 PF00989 PAS fold UP12_RS13060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS13060 PF16736 UP12_RS13060 UP12_RS13065 PF00072 Response regulator receiver domain UP12_RS13065 PF00486 Transcriptional regulatory protein, C terminal UP12_RS13070 PF00056 lactate/malate dehydrogenase, NAD binding domain UP12_RS13070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UP12_RS13075 PF00180 Isocitrate/isopropylmalate dehydrogenase UP12_RS13080 PF00285 Citrate synthase UP12_RS13085 PF04284 UP12_RS13085 UP12_RS13090 PF01594 UP12_RS13090 UP12_RS13095 PF04186 UP12_RS13095 UP12_RS13100 PF00224 Pyruvate kinase, barrel domain UP12_RS13100 PF00391 PEP-utilising enzyme, mobile domain UP12_RS13100 PF02887 Pyruvate kinase, alpha/beta domain UP12_RS13105 PF00365 Phosphofructokinase UP12_RS13110 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UP12_RS13115 PF01039 Carboxyl transferase domain UP12_RS13120 PF00390 Malic enzyme, N-terminal domain UP12_RS13120 PF03949 Malic enzyme, NAD binding domain UP12_RS13125 PF01336 OB-fold nucleic acid binding domain UP12_RS13125 PF02811 PHP domain UP12_RS13125 PF07733 Bacterial DNA polymerase III alpha subunit UP12_RS13125 PF14579 Helix-hairpin-helix motif UP12_RS13130 PF14034 UP12_RS13130 UP12_RS13145 PF01368 DHH family UP12_RS13145 PF02272 DHHA1 domain UP12_RS13150 PF14007 UP12_RS13150 UP12_RS13155 PF00392 Bacterial regulatory proteins, gntR family UP12_RS13155 PF00571 CBS domain UP12_RS13155 PF03061 Thioesterase superfamily UP12_RS13155 PF07085 DRTGG domain UP12_RS13160 PF13483 Beta-lactamase superfamily domain UP12_RS13165 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS13175 PF00206 Lyase UP12_RS13175 PF14698 Argininosuccinate lyase C-terminal UP12_RS13180 PF00764 Arginosuccinate synthase UP12_RS13185 PF00994 Probable molybdopterin binding domain UP12_RS13190 PF00871 Acetokinase family UP12_RS13195 PF02384 N-6 DNA Methylase UP12_RS13200 PF08534 Redoxin UP12_RS13205 PF09579 UP12_RS13205 UP12_RS13210 PF11167 UP12_RS13210 UP12_RS13215 PF06271 UP12_RS13215 UP12_RS13220 PF01343 Peptidase family S49 UP12_RS13225 PF01513 ATP-NAD kinase UP12_RS13230 PF00270 DEAD/DEAH box helicase UP12_RS13230 PF00271 Helicase conserved C-terminal domain UP12_RS13230 PF03880 DbpA RNA binding domain UP12_RS13235 PF00487 UP12_RS13235 UP12_RS13240 PF07730 Histidine kinase UP12_RS13245 PF00072 Response regulator receiver domain UP12_RS13245 PF00196 Bacterial regulatory proteins, luxR family UP12_RS13250 PF01497 Periplasmic binding protein UP12_RS13255 PF00072 Response regulator receiver domain UP12_RS13255 PF00486 Transcriptional regulatory protein, C terminal UP12_RS13260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS13265 PF01098 UP12_RS13265 UP12_RS13270 PF03551 Transcriptional regulator PadR-like family UP12_RS13275 PF00005 ABC transporter UP12_RS13280 PF02687 UP12_RS13280 UP12_RS13285 PF01979 Amidohydrolase family UP12_RS13290 PF02525 Flavodoxin-like fold UP12_RS13295 PF01047 MarR family UP12_RS13300 PF01810 UP12_RS13300 UP12_RS13305 PF00501 AMP-binding enzyme UP12_RS13305 PF13193 AMP-binding enzyme C-terminal domain UP12_RS13310 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP12_RS13315 PF02568 Thiamine biosynthesis protein (ThiI) UP12_RS13315 PF02926 THUMP domain UP12_RS13320 PF00266 Aminotransferase class-V UP12_RS13325 PF05525 UP12_RS13325 UP12_RS13330 PF05525 UP12_RS13330 UP12_RS13335 PF06160 UP12_RS13335 UP12_RS13340 PF02811 PHP domain UP12_RS13340 PF13263 PHP-associated UP12_RS13345 PF00440 Bacterial regulatory proteins, tetR family UP12_RS13350 PF13185 GAF domain UP12_RS13355 PF00163 Ribosomal protein S4/S9 N-terminal domain UP12_RS13355 PF01479 S4 domain UP12_RS13360 PF01391 Collagen triple helix repeat (20 copies) UP12_RS13365 PF00857 Isochorismatase family UP12_RS13375 PF01674 Lipase (class 2) UP12_RS13380 PF00579 tRNA synthetases class I (W and Y) UP12_RS13380 PF01479 S4 domain UP12_RS13385 PF00501 AMP-binding enzyme UP12_RS13385 PF13193 AMP-binding enzyme C-terminal domain UP12_RS13395 PF00571 CBS domain UP12_RS13400 PF00850 Histone deacetylase domain UP12_RS13405 PF00356 Bacterial regulatory proteins, lacI family UP12_RS13405 PF13377 Periplasmic binding protein-like domain UP12_RS13410 PF00793 DAHP synthetase I family UP12_RS13410 PF01817 Chorismate mutase type II UP12_RS13415 PF11009 Protein of unknown function (DUF2847) UP12_RS13420 PF12732 UP12_RS13420 UP12_RS13425 PF06103 UP12_RS13425 UP12_RS13430 PF01225 Mur ligase family, catalytic domain UP12_RS13430 PF02875 Mur ligase family, glutamate ligase domain UP12_RS13430 PF08245 Mur ligase middle domain UP12_RS13435 PF01580 FtsK/SpoIIIE family UP12_RS13435 PF09397 Ftsk gamma domain UP12_RS13440 PF01588 Putative tRNA binding domain UP12_RS13440 PF14794 Domain of unknown function (DUF4479) UP12_RS13445 PF07285 UP12_RS13445 UP12_RS13450 PF00085 Thioredoxin UP12_RS13455 PF13303 UP12_RS13455 UP12_RS13460 PF11071 UP12_RS13460 UP12_RS13465 PF05343 M42 glutamyl aminopeptidase UP12_RS13470 PF03413 Peptidase propeptide and YPEB domain UP12_RS13475 PF00390 Malic enzyme, N-terminal domain UP12_RS13475 PF03949 Malic enzyme, NAD binding domain UP12_RS13480 PF00753 Metallo-beta-lactamase superfamily UP12_RS13485 PF02390 Putative methyltransferase UP12_RS13490 PF14165 UP12_RS13490 UP12_RS13495 PF01636 Phosphotransferase enzyme family UP12_RS13500 PF00781 Diacylglycerol kinase catalytic domain UP12_RS13510 PF13563 2'-5' RNA ligase superfamily UP12_RS13515 PF00291 Pyridoxal-phosphate dependent enzyme UP12_RS13520 PF03575 Peptidase family S51 UP12_RS13525 PF01546 Peptidase family M20/M25/M40 UP12_RS13530 PF00860 Permease family UP12_RS13535 PF08220 DeoR-like helix-turn-helix domain UP12_RS13540 PF00849 RNA pseudouridylate synthase UP12_RS13540 PF01479 S4 domain UP12_RS13545 PF01943 UP12_RS13545 UP12_RS13545 PF14667 Polysaccharide biosynthesis C-terminal domain UP12_RS13550 PF03486 HI0933-like protein UP12_RS13560 PF02028 BCCT family transporter UP12_RS13565 PF03691 UP12_RS13565 UP12_RS13570 PF10957 UP12_RS13570 UP12_RS13575 PF00581 Rhodanese-like domain UP12_RS13580 PF04854 UP12_RS13580 UP12_RS13585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP12_RS13585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UP12_RS13595 PF07470 Glycosyl Hydrolase Family 88 UP12_RS13600 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS13605 PF02743 Cache domain UP12_RS13605 PF12833 Helix-turn-helix domain UP12_RS13610 PF01638 HxlR-like helix-turn-helix UP12_RS13615 PF07690 Major Facilitator Superfamily UP12_RS13620 PF00248 Aldo/keto reductase family UP12_RS13625 PF13416 Bacterial extracellular solute-binding protein UP12_RS13630 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS13635 PF01370 NAD dependent epimerase/dehydratase family UP12_RS13640 PF05448 Acetyl xylan esterase (AXE1) UP12_RS13645 PF00133 tRNA synthetases class I (I, L, M and V) UP12_RS13645 PF08264 Anticodon-binding domain of tRNA UP12_RS13645 PF09334 tRNA synthetases class I (M) UP12_RS13645 PF13603 Leucyl-tRNA synthetase, Domain 2 UP12_RS13650 PF14074 UP12_RS13650 UP12_RS13655 PF01740 STAS domain UP12_RS13655 PF13426 PAS domain UP12_RS13665 PF02687 UP12_RS13665 UP12_RS13665 PF12704 MacB-like periplasmic core domain UP12_RS13670 PF00005 ABC transporter UP12_RS13680 PF00005 ABC transporter UP12_RS13685 PF00392 Bacterial regulatory proteins, gntR family UP12_RS13695 PF10732 UP12_RS13695 UP12_RS13700 PF04055 Radical SAM superfamily UP12_RS13700 PF16199 UP12_RS13700 UP12_RS13705 PF06962 Putative rRNA methylase UP12_RS13710 PF10776 UP12_RS13710 UP12_RS13715 PF12146 Putative lysophospholipase UP12_RS13720 PF00132 Bacterial transferase hexapeptide (six repeats) UP12_RS13725 PF00733 Asparagine synthase UP12_RS13725 PF13537 Glutamine amidotransferase domain UP12_RS13730 PF00438 S-adenosylmethionine synthetase, N-terminal domain UP12_RS13730 PF02772 S-adenosylmethionine synthetase, central domain UP12_RS13730 PF02773 S-adenosylmethionine synthetase, C-terminal domain UP12_RS13735 PF01293 Phosphoenolpyruvate carboxykinase UP12_RS13740 PF10763 Protein of unknown function (DUF2584) UP12_RS13745 PF00326 Prolyl oligopeptidase family UP12_RS13750 PF01593 Flavin containing amine oxidoreductase UP12_RS13755 PF00535 Glycosyl transferase family 2 UP12_RS13760 PF01553 Acyltransferase UP12_RS13765 PF04240 UP12_RS13765 UP12_RS13770 PF09084 NMT1/THI5 like UP12_RS13775 PF00005 ABC transporter UP12_RS13780 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS13785 PF00293 NUDIX domain UP12_RS13790 PF02342 TerD domain UP12_RS13795 PF01987 Mitochondrial biogenesis AIM24 UP12_RS13805 PF05105 UP12_RS13805 UP12_RS13815 PF00210 Ferritin-like domain UP12_RS13820 PF12606 UP12_RS13820 UP12_RS13825 PF13115 UP12_RS13825 UP12_RS13830 PF02664 S-Ribosylhomocysteinase (LuxS) UP12_RS13835 PF01809 UP12_RS13835 UP12_RS13840 PF00484 Carbonic anhydrase UP12_RS13845 PF01297 Periplasmic solute binding protein family UP12_RS13850 PF01197 Ribosomal protein L31 UP12_RS13860 PF01654 UP12_RS13860 UP12_RS13865 PF02322 UP12_RS13865 UP12_RS13870 PF07561 UP12_RS13870 UP12_RS13880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UP12_RS13880 PF13378 Enolase C-terminal domain-like UP12_RS13885 PF00501 AMP-binding enzyme UP12_RS13885 PF13193 AMP-binding enzyme C-terminal domain UP12_RS13890 PF00378 Enoyl-CoA hydratase/isomerase family UP12_RS13895 PF00561 alpha/beta hydrolase fold UP12_RS13900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP12_RS13900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP12_RS13900 PF16582 UP12_RS13900 UP12_RS13905 PF00425 chorismate binding enzyme UP12_RS13910 PF01040 UbiA prenyltransferase family UP12_RS13915 PF01258 Prokaryotic dksA/traR C4-type zinc finger UP12_RS13920 PF03073 TspO/MBR family UP12_RS14045 PF09515 Thiamine transporter protein (Thia_YuaJ) UP12_RS14055 PF08445 FR47-like protein UP12_RS14060 PF01381 Helix-turn-helix UP12_RS14060 PF06803 UP12_RS14060 UP12_RS14065 PF01098 UP12_RS14065 UP12_RS14070 PF01098 UP12_RS14070 UP12_RS14075 PF01145 SPFH domain / Band 7 family UP12_RS14075 PF15975 UP12_RS14075 UP12_RS14085 PF12867 DinB superfamily UP12_RS14090 PF00465 Iron-containing alcohol dehydrogenase UP12_RS14095 PF00171 Aldehyde dehydrogenase family UP12_RS14105 PF13424 Tetratricopeptide repeat UP12_RS14125 PF01471 Putative peptidoglycan binding domain UP12_RS14125 PF01510 N-acetylmuramoyl-L-alanine amidase UP12_RS14130 PF04688 UP12_RS14130 UP12_RS14135 PF10960 UP12_RS14135 UP12_RS14140 PF09693 UP12_RS14140 UP12_RS14155 PF12571 UP12_RS14155 UP12_RS14160 PF10076 UP12_RS14160 UP12_RS14165 PF04865 UP12_RS14165 UP12_RS14170 PF10934 UP12_RS14170 UP12_RS14175 PF10844 UP12_RS14175 UP12_RS14185 PF01476 LysM domain UP12_RS14190 PF01464 Transglycosylase SLT domain UP12_RS14195 PF08890 Phage XkdN-like protein UP12_RS14205 PF09393 Protein of unknown function (DUF2001) UP12_RS14210 PF04984 Phage tail sheath protein UP12_RS14225 PF04883 UP12_RS14225 UP12_RS14230 PF12206 Domain of unknown function (DUF3599) UP12_RS14235 PF11436 Protein of unknown function (DUF3199) UP12_RS14240 PF14553 YqbF, hypothetical protein domain UP12_RS14245 PF05065 Phage capsid family UP12_RS14250 PF14550 UP12_RS14250 UP12_RS14260 PF04233 UP12_RS14260 UP12_RS14265 PF04860 Phage portal protein UP12_RS14270 PF04466 Phage terminase large subunit UP12_RS14275 PF10668 UP12_RS14275 UP12_RS14285 PF01555 DNA methylase UP12_RS14285 PF02195 ParB-like nuclease domain UP12_RS14300 PF01391 Collagen triple helix repeat (20 copies) UP12_RS14330 PF13392 HNH endonuclease UP12_RS14400 PF00772 DnaB-like helicase N terminal domain UP12_RS14400 PF03796 DnaB-like helicase C terminal domain UP12_RS14405 PF11417 Loader and inhibitor of phage G40P UP12_RS14420 PF12706 Beta-lactamase superfamily domain UP12_RS14425 PF03837 UP12_RS14425 UP12_RS14430 PF13476 AAA domain UP12_RS14435 PF09466 Hypothetical protein Yqai UP12_RS14450 PF12844 Helix-turn-helix domain UP12_RS14455 PF12728 Helix-turn-helix domain UP12_RS14465 PF01381 Helix-turn-helix UP12_RS14475 PF06114 Domain of unknown function (DUF955) UP12_RS14480 PF00589 Phage integrase family UP12_RS14480 PF14659 Phage integrase, N-terminal SAM-like domain UP12_RS14495 PF01471 Putative peptidoglycan binding domain UP12_RS14495 PF01510 N-acetylmuramoyl-L-alanine amidase UP12_RS14500 PF04688 UP12_RS14500 UP12_RS14505 PF10960 UP12_RS14505 UP12_RS14510 PF09693 UP12_RS14510 UP12_RS14530 PF12571 UP12_RS14530 UP12_RS14535 PF10076 UP12_RS14535 UP12_RS14540 PF04865 UP12_RS14540 UP12_RS14545 PF10934 UP12_RS14545 UP12_RS14550 PF10844 UP12_RS14550 UP12_RS14560 PF01476 LysM domain UP12_RS14565 PF01464 Transglycosylase SLT domain UP12_RS14570 PF08890 Phage XkdN-like protein UP12_RS14575 PF09393 Protein of unknown function (DUF2001) UP12_RS14580 PF04984 Phage tail sheath protein UP12_RS14595 PF04883 UP12_RS14595 UP12_RS14600 PF12206 Domain of unknown function (DUF3599) UP12_RS14605 PF11436 Protein of unknown function (DUF3199) UP12_RS14610 PF05065 Phage capsid family UP12_RS14615 PF14550 UP12_RS14615 UP12_RS14620 PF04860 Phage portal protein UP12_RS14625 PF04466 Phage terminase large subunit UP12_RS14630 PF06056 Putative ATPase subunit of terminase (gpP-like) UP12_RS14635 PF08281 Sigma-70, region 4 UP12_RS14655 PF01381 Helix-turn-helix UP12_RS14660 PF01381 Helix-turn-helix UP12_RS14670 PF04055 Radical SAM superfamily UP12_RS14670 PF06968 Biotin and Thiamin Synthesis associated domain UP12_RS14680 PF02673 UP12_RS14680 UP12_RS14685 PF01594 UP12_RS14685 UP12_RS14690 PF13564 UP12_RS14690 UP12_RS14695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP12_RS14700 PF01965 DJ-1/PfpI family UP12_RS14705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS14705 PF00672 HAMP domain UP12_RS14705 PF02743 Cache domain UP12_RS14710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS14710 PF00672 HAMP domain UP12_RS14710 PF02743 Cache domain UP12_RS14715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS14715 PF00672 HAMP domain UP12_RS14715 PF02743 Cache domain UP12_RS14720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS14720 PF00672 HAMP domain UP12_RS14720 PF02743 Cache domain UP12_RS14735 PF03060 Nitronate monooxygenase UP12_RS14740 PF01894 Uncharacterised protein family UPF0047 UP12_RS14745 PF00571 CBS domain UP12_RS14745 PF01595 UP12_RS14745 UP12_RS14745 PF03471 Transporter associated domain UP12_RS14750 PF04298 UP12_RS14750 UP12_RS14760 PF02254 TrkA-N domain UP12_RS14760 PF07885 Ion channel UP12_RS14765 PF08868 YugN-like family UP12_RS14770 PF10676 UP12_RS14770 UP12_RS14775 PF00342 Phosphoglucose isomerase UP12_RS14780 PF00465 Iron-containing alcohol dehydrogenase UP12_RS14785 PF00465 Iron-containing alcohol dehydrogenase UP12_RS14790 PF04070 UP12_RS14790 UP12_RS14795 PF00575 S1 RNA binding domain UP12_RS14800 PF00155 Aminotransferase class I and II UP12_RS14805 PF01037 AsnC family UP12_RS14810 PF00561 alpha/beta hydrolase fold UP12_RS14815 PF08958 Domain of unknown function (DUF1871) UP12_RS14820 PF00155 Aminotransferase class I and II UP12_RS14825 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS14825 PF07694 5TMR of 5TMR-LYT UP12_RS14835 PF08810 Kinase associated protein B UP12_RS14840 PF00929 Exonuclease UP12_RS14845 PF00083 Sugar (and other) transporter UP12_RS14845 PF07690 Major Facilitator Superfamily UP12_RS14850 PF00905 Penicillin binding protein transpeptidase domain UP12_RS14850 PF00912 Transglycosylase UP12_RS14855 PF04134 UP12_RS14855 UP12_RS14865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS14865 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP12_RS14865 PF17203 UP12_RS14865 UP12_RS14870 PF00072 Response regulator receiver domain UP12_RS14875 PF02608 Basic membrane protein UP12_RS14880 PF00005 ABC transporter UP12_RS14885 PF02653 UP12_RS14885 UP12_RS14890 PF02653 UP12_RS14890 UP12_RS14895 PF03390 UP12_RS14895 UP12_RS14905 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains UP12_RS14905 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UP12_RS14905 PF13244 UP12_RS14905 UP12_RS14910 PF04039 UP12_RS14910 UP12_RS14915 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UP12_RS14920 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains UP12_RS14925 PF01899 UP12_RS14925 UP12_RS14930 PF04066 UP12_RS14930 UP12_RS14935 PF03334 UP12_RS14935 UP12_RS14940 PF03061 Thioesterase superfamily UP12_RS14945 PF00072 Response regulator receiver domain UP12_RS14945 PF00196 Bacterial regulatory proteins, luxR family UP12_RS14950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS14950 PF07730 Histidine kinase UP12_RS14955 PF00348 Polyprenyl synthetase UP12_RS14960 PF08181 UP12_RS14960 UP12_RS14970 PF00563 EAL domain UP12_RS14970 PF08668 HDOD domain UP12_RS14975 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family UP12_RS14980 PF00857 Isochorismatase family UP12_RS14985 PF07997 Protein of unknown function (DUF1694) UP12_RS14990 PF14166 UP12_RS14990 UP12_RS14995 PF10676 UP12_RS14995 UP12_RS15000 PF10676 UP12_RS15000 UP12_RS15005 PF01594 UP12_RS15005 UP12_RS15010 PF10842 UP12_RS15010 UP12_RS15015 PF07819 PGAP1-like protein UP12_RS15020 PF01966 HD domain UP12_RS15025 PF00106 short chain dehydrogenase UP12_RS15035 PF12698 ABC-2 family transporter protein UP12_RS15040 PF01580 FtsK/SpoIIIE family UP12_RS15040 PF12538 DNA transporter UP12_RS15045 PF10140 WXG100 protein secretion system (Wss), protein YukC UP12_RS15050 PF08817 WXG100 protein secretion system (Wss), protein YukD UP12_RS15055 PF06013 Proteins of 100 residues with WXG UP12_RS15060 PF06018 CodY GAF-like domain UP12_RS15060 PF13556 PucR C-terminal helix-turn-helix domain UP12_RS15065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain UP12_RS15065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain UP12_RS15070 PF02632 BioY family UP12_RS15075 PF07070 UP12_RS15075 UP12_RS15080 PF03553 UP12_RS15080 UP12_RS15080 PF13726 UP12_RS15080 UP12_RS15085 PF00883 Cytosol aminopeptidase family, catalytic domain UP12_RS15085 PF02789 Cytosol aminopeptidase family, N-terminal domain UP12_RS15090 PF02681 UP12_RS15090 UP12_RS15095 PF06725 3D domain UP12_RS15100 PF14068 UP12_RS15100 UP12_RS15105 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS15110 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS15125 PF01521 Iron-sulphur cluster biosynthesis UP12_RS15130 PF01678 Diaminopimelate epimerase UP12_RS15135 PF07293 UP12_RS15135 UP12_RS15140 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS15150 PF07315 Protein of unknown function (DUF1462) UP12_RS15155 PF01106 NifU-like domain UP12_RS15160 PF00326 Prolyl oligopeptidase family UP12_RS15160 PF07676 WD40-like Beta Propeller Repeat UP12_RS15165 PF00288 GHMP kinases N terminal domain UP12_RS15165 PF08544 GHMP kinases C terminal UP12_RS15170 PF00291 Pyridoxal-phosphate dependent enzyme UP12_RS15175 PF00742 Homoserine dehydrogenase UP12_RS15175 PF01842 ACT domain UP12_RS15175 PF03447 Homoserine dehydrogenase, NAD binding domain UP12_RS15180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP12_RS15180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP12_RS15190 PF04608 Phosphatidylglycerophosphatase A UP12_RS15195 PF13242 HAD-hyrolase-like UP12_RS15195 PF13344 Haloacid dehalogenase-like hydrolase UP12_RS15200 PF01934 Protein of unknown function DUF86 UP12_RS15205 PF06265 Protein of unknown function (DUF1027) UP12_RS15210 PF09580 UP12_RS15210 UP12_RS15215 PF04055 Radical SAM superfamily UP12_RS15215 PF16881 UP12_RS15215 UP12_RS15225 PF01551 Peptidase family M23 UP12_RS15230 PF09560 UP12_RS15230 UP12_RS15235 PF08827 Domain of unknown function (DUF1805) UP12_RS15240 PF00149 Calcineurin-like phosphoesterase UP12_RS15240 PF02872 5'-nucleotidase, C-terminal domain UP12_RS15245 PF01904 Protein of unknown function DUF72 UP12_RS15250 PF13556 PucR C-terminal helix-turn-helix domain UP12_RS15255 PF00190 Cupin UP12_RS15260 PF07690 Major Facilitator Superfamily UP12_RS15265 PF00266 Aminotransferase class-V UP12_RS15270 PF04231 Endonuclease I UP12_RS15275 PF06276 Ferric iron reductase FhuF-like transporter UP12_RS15275 PF11575 UP12_RS15275 UP12_RS15280 PF01032 FecCD transport family UP12_RS15285 PF01032 FecCD transport family UP12_RS15290 PF01497 Periplasmic binding protein UP12_RS15295 PF12146 Putative lysophospholipase UP12_RS15300 PF07859 alpha/beta hydrolase fold UP12_RS15305 PF06146 UP12_RS15305 UP12_RS15310 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS15315 PF00072 Response regulator receiver domain UP12_RS15315 PF00486 Transcriptional regulatory protein, C terminal UP12_RS15320 PF04235 UP12_RS15320 UP12_RS15325 PF08279 HTH domain UP12_RS15325 PF13280 UP12_RS15325 UP12_RS15330 PF02525 Flavodoxin-like fold UP12_RS15335 PF02384 N-6 DNA Methylase UP12_RS15335 PF12161 HsdM N-terminal domain UP12_RS15340 PF01420 Type I restriction modification DNA specificity domain UP12_RS15350 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) UP12_RS15350 PF04851 Type III restriction enzyme, res subunit UP12_RS15350 PF12008 Type I restriction and modification enzyme - subunit R C terminal UP12_RS15355 PF01420 Type I restriction modification DNA specificity domain UP12_RS15360 PF01458 Uncharacterized protein family (UPF0051) UP12_RS15365 PF01592 NifU-like N terminal domain UP12_RS15370 PF00266 Aminotransferase class-V UP12_RS15375 PF01458 Uncharacterized protein family (UPF0051) UP12_RS15380 PF00005 ABC transporter UP12_RS15385 PF02627 Carboxymuconolactone decarboxylase family UP12_RS15390 PF03180 NLPA lipoprotein UP12_RS15395 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS15400 PF00005 ABC transporter UP12_RS15400 PF09383 NIL domain UP12_RS15405 PF02036 SCP-2 sterol transfer family UP12_RS15410 PF00085 Thioredoxin UP12_RS15420 PF10830 UP12_RS15420 UP12_RS15425 PF01597 Glycine cleavage H-protein UP12_RS15430 PF03960 ArsC family UP12_RS15435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP12_RS15435 PF02770 Acyl-CoA dehydrogenase, middle domain UP12_RS15435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP12_RS15440 PF00108 Thiolase, N-terminal domain UP12_RS15440 PF02803 Thiolase, C-terminal domain UP12_RS15445 PF00378 Enoyl-CoA hydratase/isomerase family UP12_RS15445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UP12_RS15445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UP12_RS15455 PF07875 UP12_RS15455 UP12_RS15460 PF10835 UP12_RS15460 UP12_RS15465 PF00005 ABC transporter UP12_RS15470 PF14039 UP12_RS15470 UP12_RS15475 PF00106 short chain dehydrogenase UP12_RS15480 PF13180 PDZ domain UP12_RS15480 PF13365 Trypsin-like peptidase domain UP12_RS15485 PF00072 Response regulator receiver domain UP12_RS15485 PF00486 Transcriptional regulatory protein, C terminal UP12_RS15490 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS15490 PF00672 HAMP domain UP12_RS15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS15495 PF00440 Bacterial regulatory proteins, tetR family UP12_RS15500 PF00206 Lyase UP12_RS15500 PF10415 Fumarase C C-terminus UP12_RS15505 PF03323 UP12_RS15505 UP12_RS15510 PF03845 UP12_RS15510 UP12_RS15515 PF05504 Spore germination B3/ GerAC like, C-terminal UP12_RS15525 PF00072 Response regulator receiver domain UP12_RS15525 PF00196 Bacterial regulatory proteins, luxR family UP12_RS15530 PF00672 HAMP domain UP12_RS15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS15530 PF07730 Histidine kinase UP12_RS15535 PF09922 Cell wall-active antibiotics response protein (DUF2154) UP12_RS15540 PF13349 UP12_RS15540 UP12_RS15545 PF04012 UP12_RS15545 UP12_RS15560 PF00005 ABC transporter UP12_RS15565 PF01032 FecCD transport family UP12_RS15570 PF01497 Periplasmic binding protein UP12_RS15575 PF00295 Glycosyl hydrolases family 28 UP12_RS15575 PF12708 Pectate lyase superfamily protein UP12_RS15580 PF04295 UP12_RS15580 UP12_RS15580 PF08666 SAF domain UP12_RS15585 PF01232 Mannitol dehydrogenase Rossmann domain UP12_RS15585 PF08125 Mannitol dehydrogenase C-terminal domain UP12_RS15590 PF00356 Bacterial regulatory proteins, lacI family UP12_RS15590 PF13377 Periplasmic binding protein-like domain UP12_RS15595 PF02614 Glucuronate isomerase UP12_RS15600 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS15605 PF00072 Response regulator receiver domain UP12_RS15605 PF00486 Transcriptional regulatory protein, C terminal UP12_RS15610 PF00005 ABC transporter UP12_RS15615 PF01032 FecCD transport family UP12_RS15620 PF01032 FecCD transport family UP12_RS15625 PF01497 Periplasmic binding protein UP12_RS15630 PF13520 Amino acid permease UP12_RS15635 PF09575 UP12_RS15635 UP12_RS15640 PF13463 Winged helix DNA-binding domain UP12_RS15645 PF04307 UP12_RS15645 UP12_RS15650 PF00884 Sulfatase UP12_RS15655 PF13531 Bacterial extracellular solute-binding protein UP12_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS15665 PF00248 Aldo/keto reductase family UP12_RS15670 PF00480 ROK family UP12_RS15675 PF00999 Sodium/hydrogen exchanger family UP12_RS15680 PF03458 UP12_RS15680 UP12_RS15685 PF02600 Disulfide bond formation protein DsbB UP12_RS15690 PF13462 Thioredoxin UP12_RS15695 PF00122 E1-E2 ATPase UP12_RS15695 PF00403 Heavy-metal-associated domain UP12_RS15695 PF00702 haloacid dehalogenase-like hydrolase UP12_RS15700 PF00005 ABC transporter UP12_RS15705 PF00950 UP12_RS15705 UP12_RS15710 PF01297 Periplasmic solute binding protein family UP12_RS15720 PF00440 Bacterial regulatory proteins, tetR family UP12_RS15720 PF13977 Bacterial transcriptional repressor UP12_RS15725 PF00072 Response regulator receiver domain UP12_RS15725 PF08664 UP12_RS15725 UP12_RS15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS15735 PF00206 Lyase UP12_RS15735 PF10415 Fumarase C C-terminus UP12_RS15740 PF00375 Sodium:dicarboxylate symporter family UP12_RS15745 PF00122 E1-E2 ATPase UP12_RS15745 PF00403 Heavy-metal-associated domain UP12_RS15745 PF00702 haloacid dehalogenase-like hydrolase UP12_RS15750 PF00403 Heavy-metal-associated domain UP12_RS15755 PF02583 Metal-sensitive transcriptional repressor UP12_RS15765 PF00990 GGDEF domain UP12_RS15765 PF13188 PAS domain UP12_RS15765 PF16927 UP12_RS15765 UP12_RS15785 PF01668 SmpB protein UP12_RS15790 PF00575 S1 RNA binding domain UP12_RS15790 PF00773 RNB domain UP12_RS15790 PF08206 Ribonuclease B OB domain UP12_RS15795 PF12146 Putative lysophospholipase UP12_RS15800 PF03840 Preprotein translocase SecG subunit UP12_RS15805 PF04014 Antidote-toxin recognition MazE UP12_RS15810 PF01381 Helix-turn-helix UP12_RS15815 PF13560 Helix-turn-helix domain UP12_RS15820 PF13560 Helix-turn-helix domain UP12_RS15825 PF01638 HxlR-like helix-turn-helix UP12_RS15830 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS15835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system UP12_RS15840 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS15845 PF00005 ABC transporter UP12_RS15845 PF00571 CBS domain UP12_RS15855 PF01914 UP12_RS15855 UP12_RS15865 PF00583 Acetyltransferase (GNAT) family UP12_RS15885 PF00005 ABC transporter UP12_RS15895 PF00113 Enolase, C-terminal TIM barrel domain UP12_RS15895 PF03952 Enolase, N-terminal domain UP12_RS15900 PF01676 Metalloenzyme superfamily UP12_RS15900 PF06415 BPG-independent PGAM N-terminus (iPGM_N) UP12_RS15905 PF00121 Triosephosphate isomerase UP12_RS15910 PF00162 Phosphoglycerate kinase UP12_RS15915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UP12_RS15915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UP12_RS15920 PF04198 Putative sugar-binding domain UP12_RS15925 PF00324 Amino acid permease UP12_RS15930 PF00202 Aminotransferase class-III UP12_RS15935 PF00158 Sigma-54 interaction domain UP12_RS15935 PF02954 Bacterial regulatory protein, Fis family UP12_RS15935 PF08448 PAS fold UP12_RS15940 PF00392 Bacterial regulatory proteins, gntR family UP12_RS15940 PF07729 FCD domain UP12_RS15945 PF00309 UP12_RS15945 UP12_RS15945 PF04552 Sigma-54, DNA binding domain UP12_RS15945 PF04963 Sigma-54 factor, core binding domain UP12_RS15950 PF09628 YvfG protein UP12_RS15955 PF01554 MatE UP12_RS15960 PF00005 ABC transporter UP12_RS15965 PF00005 ABC transporter UP12_RS15970 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS15975 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS15980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP12_RS15985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UP12_RS15990 PF00132 Bacterial transferase hexapeptide (six repeats) UP12_RS15995 PF02397 UP12_RS15995 UP12_RS16000 PF01943 UP12_RS16000 UP12_RS16005 PF04230 UP12_RS16005 UP12_RS16010 PF00535 Glycosyl transferase family 2 UP12_RS16015 PF14897 UP12_RS16015 UP12_RS16020 PF00534 Glycosyl transferases group 1 UP12_RS16020 PF13439 Glycosyltransferase Family 4 UP12_RS16025 PF00535 Glycosyl transferase family 2 UP12_RS16030 PF00534 Glycosyl transferases group 1 UP12_RS16030 PF13477 Glycosyl transferase 4-like UP12_RS16035 PF02719 Polysaccharide biosynthesis protein UP12_RS16035 PF13727 CoA-binding domain UP12_RS16040 PF13614 AAA domain UP12_RS16045 PF02706 Chain length determinant protein UP12_RS16050 PF01381 Helix-turn-helix UP12_RS16050 PF08671 Anti-repressor SinI UP12_RS16055 PF04688 UP12_RS16055 UP12_RS16060 PF01497 Periplasmic binding protein UP12_RS16065 PF01032 FecCD transport family UP12_RS16070 PF01032 FecCD transport family UP12_RS16075 PF01522 Polysaccharide deacetylase UP12_RS16075 PF13739 Domain of unknown function (DUF4163) UP12_RS16080 PF00005 ABC transporter UP12_RS16080 PF12848 ABC transporter UP12_RS16085 PF00005 ABC transporter UP12_RS16090 PF00005 ABC transporter UP12_RS16095 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS16095 PF12911 UP12_RS16095 UP12_RS16100 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS16105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP12_RS16110 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase UP12_RS16130 PF05154 UP12_RS16130 UP12_RS16135 PF00574 Clp protease UP12_RS16140 PF03641 Possible lysine decarboxylase UP12_RS16145 PF03819 MazG nucleotide pyrophosphohydrolase domain UP12_RS16150 PF00916 UP12_RS16150 UP12_RS16150 PF01740 STAS domain UP12_RS16155 PF00484 Carbonic anhydrase UP12_RS16160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP12_RS16160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP12_RS16165 PF00545 ribonuclease UP12_RS16170 PF00375 Sodium:dicarboxylate symporter family UP12_RS16175 PF00266 Aminotransferase class-V UP12_RS16180 PF01380 SIS domain UP12_RS16180 PF01418 Helix-turn-helix domain, rpiR family UP12_RS16185 PF00797 N-acetyltransferase UP12_RS16190 PF00381 PTS HPr component phosphorylation site UP12_RS16195 PF02650 WhiA C-terminal HTH domain UP12_RS16195 PF10298 WhiA N-terminal LAGLIDADG-like domain UP12_RS16195 PF14527 WhiA LAGLIDADG-like domain UP12_RS16200 PF01933 Uncharacterised protein family UPF0052 UP12_RS16205 PF03668 UP12_RS16205 UP12_RS16210 PF00293 NUDIX domain UP12_RS16215 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP12_RS16220 PF00877 NlpC/P60 family UP12_RS16225 PF14559 Tetratricopeptide repeat UP12_RS16230 PF01502 Phosphoribosyl-AMP cyclohydrolase UP12_RS16230 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase UP12_RS16235 PF00977 Histidine biosynthesis protein UP12_RS16240 PF00977 Histidine biosynthesis protein UP12_RS16245 PF00117 Glutamine amidotransferase class-I UP12_RS16250 PF00475 Imidazoleglycerol-phosphate dehydratase UP12_RS16255 PF00815 Histidinol dehydrogenase UP12_RS16260 PF01634 ATP phosphoribosyltransferase UP12_RS16265 PF13393 Histidyl-tRNA synthetase UP12_RS16270 PF13529 Peptidase_C39 like family UP12_RS16275 PF01323 DSBA-like thioredoxin domain UP12_RS16280 PF13460 NADH(P)-binding UP12_RS16285 PF02082 Transcriptional regulator UP12_RS16290 PF14602 Hexapeptide repeat of succinyl-transferase UP12_RS16295 PF13419 Haloacid dehalogenase-like hydrolase UP12_RS16300 PF07670 Nucleoside recognition UP12_RS16305 PF01790 UP12_RS16305 UP12_RS16310 PF02603 HPr Serine kinase N terminus UP12_RS16310 PF07475 HPr Serine kinase C-terminal domain UP12_RS16315 PF01979 Amidohydrolase family UP12_RS16320 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase UP12_RS16325 PF00392 Bacterial regulatory proteins, gntR family UP12_RS16325 PF07702 UTRA domain UP12_RS16330 PF00149 Calcineurin-like phosphoesterase UP12_RS16330 PF00932 Lamin Tail Domain UP12_RS16335 PF04020 UP12_RS16335 UP12_RS16340 PF04024 UP12_RS16340 UP12_RS16345 PF13349 UP12_RS16345 UP12_RS16360 PF00005 ABC transporter UP12_RS16365 PF00271 Helicase conserved C-terminal domain UP12_RS16365 PF02151 UvrB/uvrC motif UP12_RS16365 PF04851 Type III restriction enzyme, res subunit UP12_RS16365 PF12344 Ultra-violet resistance protein B UP12_RS16370 PF09964 UP12_RS16370 UP12_RS16380 PF00391 PEP-utilising enzyme, mobile domain UP12_RS16380 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain UP12_RS16385 PF00440 Bacterial regulatory proteins, tetR family UP12_RS16390 PF07690 Major Facilitator Superfamily UP12_RS16395 PF06433 Methylamine dehydrogenase heavy chain (MADH) UP12_RS16400 PF00072 Response regulator receiver domain UP12_RS16400 PF00486 Transcriptional regulatory protein, C terminal UP12_RS16405 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS16405 PF00672 HAMP domain UP12_RS16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS16410 PF00324 Amino acid permease UP12_RS16415 PF00881 Nitroreductase family UP12_RS16420 PF01638 HxlR-like helix-turn-helix UP12_RS16435 PF01471 Putative peptidoglycan binding domain UP12_RS16435 PF03572 Peptidase family S41 UP12_RS16435 PF13180 PDZ domain UP12_RS16440 PF01925 UP12_RS16440 UP12_RS16445 PF01551 Peptidase family M23 UP12_RS16445 PF09787 UP12_RS16445 UP12_RS16450 PF02687 UP12_RS16450 UP12_RS16455 PF00005 ABC transporter UP12_RS16460 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UP12_RS16465 PF02588 UP12_RS16465 UP12_RS16465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP12_RS16470 PF12695 Alpha/beta hydrolase family UP12_RS16475 PF01432 Peptidase family M3 UP12_RS16475 PF08439 Oligopeptidase F UP12_RS16480 PF00472 RF-1 domain UP12_RS16480 PF03462 PCRF domain UP12_RS16485 PF01043 SecA preprotein cross-linking domain UP12_RS16485 PF02810 SEC-C motif UP12_RS16485 PF07516 SecA Wing and Scaffold domain UP12_RS16485 PF07517 SecA DEAD-like domain UP12_RS16490 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein UP12_RS16490 PF16321 UP12_RS16490 UP12_RS16495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS16495 PF00672 HAMP domain UP12_RS16510 PF02561 Flagellar protein FliS UP12_RS16515 PF02465 UP12_RS16515 UP12_RS16515 PF07195 UP12_RS16515 UP12_RS16515 PF07196 Flagellin hook IN motif UP12_RS16520 PF03646 FlaG protein UP12_RS16525 PF02599 Global regulator protein family UP12_RS16530 PF02623 FliW protein UP12_RS16540 PF00669 Bacterial flagellin N-terminal helical region UP12_RS16540 PF00700 Bacterial flagellin C-terminal helical region UP12_RS16545 PF00460 Flagella basal body rod protein UP12_RS16545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP12_RS16550 PF05130 FlgN protein UP12_RS16555 PF04316 Anti-sigma-28 factor, FlgM UP12_RS16565 PF00156 Phosphoribosyl transferase domain UP12_RS16570 PF10719 UP12_RS16570 UP12_RS16575 PF00271 Helicase conserved C-terminal domain UP12_RS16575 PF04851 Type III restriction enzyme, res subunit UP12_RS16580 PF02645 Uncharacterised protein, DegV family COG1307 UP12_RS16585 PF00072 Response regulator receiver domain UP12_RS16585 PF00196 Bacterial regulatory proteins, luxR family UP12_RS16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS16590 PF05384 UP12_RS16590 UP12_RS16590 PF07730 Histidine kinase UP12_RS16595 PF01205 Uncharacterized protein family UPF0029 UP12_RS16595 PF09186 Domain of unknown function (DUF1949) UP12_RS16600 PF03816 Cell envelope-related transcriptional attenuator domain UP12_RS16605 PF00953 Glycosyl transferase family 4 UP12_RS16610 PF13692 Glycosyl transferases group 1 UP12_RS16615 PF00535 Glycosyl transferase family 2 UP12_RS16625 PF04932 UP12_RS16625 UP12_RS16630 PF01370 NAD dependent epimerase/dehydratase family UP12_RS16635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UP12_RS16635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UP12_RS16635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UP12_RS16640 PF00534 Glycosyl transferases group 1 UP12_RS16640 PF13579 Glycosyl transferase 4-like domain UP12_RS16645 PF13440 UP12_RS16645 UP12_RS16650 PF02397 UP12_RS16650 UP12_RS16660 PF01520 N-acetylmuramoyl-L-alanine amidase UP12_RS16660 PF04122 UP12_RS16660 UP12_RS16665 PF04122 UP12_RS16665 UP12_RS16665 PF08486 UP12_RS16665 UP12_RS16675 PF03816 Cell envelope-related transcriptional attenuator domain UP12_RS16680 PF02350 UDP-N-acetylglucosamine 2-epimerase UP12_RS16685 PF00483 Nucleotidyl transferase UP12_RS16690 PF00005 ABC transporter UP12_RS16695 PF01061 UP12_RS16695 UP12_RS16700 PF00534 Glycosyl transferases group 1 UP12_RS16700 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase UP12_RS16705 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase UP12_RS16710 PF09318 Domain of unknown function (DUF1975) UP12_RS16715 PF01467 Cytidylyltransferase UP12_RS16720 PF03808 UP12_RS16720 UP12_RS16725 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase UP12_RS16730 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase UP12_RS16730 PF05036 Sporulation related domain UP12_RS16730 PF08239 Bacterial SH3 domain UP12_RS16735 PF01238 Phosphomannose isomerase type I UP12_RS16740 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS16745 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS16750 PF01547 Bacterial extracellular solute-binding protein UP12_RS16755 PF00072 Response regulator receiver domain UP12_RS16755 PF12833 Helix-turn-helix domain UP12_RS16760 PF00672 HAMP domain UP12_RS16760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS16760 PF06580 UP12_RS16760 UP12_RS16765 PF13407 Periplasmic binding protein domain UP12_RS16770 PF00583 Acetyltransferase (GNAT) family UP12_RS16775 PF01081 KDPG and KHG aldolase UP12_RS16780 PF00294 pfkB family carbohydrate kinase UP12_RS16785 PF00356 Bacterial regulatory proteins, lacI family UP12_RS16785 PF13377 Periplasmic binding protein-like domain UP12_RS16790 PF04962 KduI/IolB family UP12_RS16795 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS16800 PF03323 UP12_RS16800 UP12_RS16805 PF03845 UP12_RS16805 UP12_RS16810 PF05504 Spore germination B3/ GerAC like, C-terminal UP12_RS16815 PF00535 Glycosyl transferase family 2 UP12_RS16815 PF13489 Methyltransferase domain UP12_RS16820 PF00083 Sugar (and other) transporter UP12_RS16825 PF03816 Cell envelope-related transcriptional attenuator domain UP12_RS16830 PF08282 haloacid dehalogenase-like hydrolase UP12_RS16835 PF00877 NlpC/P60 family UP12_RS16840 PF09587 Bacterial capsule synthesis protein PGA_cap UP12_RS16845 PF14102 UP12_RS16845 UP12_RS16850 PF08245 Mur ligase middle domain UP12_RS16855 PF03323 UP12_RS16855 UP12_RS16860 PF03845 UP12_RS16860 UP12_RS16865 PF05504 Spore germination B3/ GerAC like, C-terminal UP12_RS16870 PF00356 Bacterial regulatory proteins, lacI family UP12_RS16870 PF13377 Periplasmic binding protein-like domain UP12_RS16875 PF00294 pfkB family carbohydrate kinase UP12_RS16880 PF05025 RbsD / FucU transport protein family UP12_RS16885 PF00005 ABC transporter UP12_RS16890 PF02653 UP12_RS16890 UP12_RS16895 PF13407 Periplasmic binding protein domain UP12_RS16900 PF01613 Flavin reductase like domain UP12_RS16905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS16905 PF03466 LysR substrate binding domain UP12_RS16910 PF00205 Thiamine pyrophosphate enzyme, central domain UP12_RS16910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP12_RS16910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP12_RS16915 PF03306 Alpha-acetolactate decarboxylase UP12_RS16920 PF01037 AsnC family UP12_RS16920 PF13404 AsnC-type helix-turn-helix domain UP12_RS16925 PF02417 UP12_RS16925 UP12_RS16930 PF02417 UP12_RS16930 UP12_RS16935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UP12_RS16935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UP12_RS16935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UP12_RS16940 PF04434 UP12_RS16940 UP12_RS16945 PF00176 SNF2 family N-terminal domain UP12_RS16945 PF00271 Helicase conserved C-terminal domain UP12_RS16945 PF12419 UP12_RS16945 UP12_RS16950 PF01740 STAS domain UP12_RS16950 PF13426 PAS domain UP12_RS16955 PF08282 haloacid dehalogenase-like hydrolase UP12_RS16965 PF14183 UP12_RS16965 UP12_RS16970 PF01741 Large-conductance mechanosensitive channel, MscL UP12_RS16975 PF07977 FabA-like domain UP12_RS16980 PF13424 Tetratricopeptide repeat UP12_RS16985 PF00460 Flagella basal body rod protein UP12_RS16985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP12_RS16990 PF00460 Flagella basal body rod protein UP12_RS16990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP12_RS16995 PF06723 MreB/Mbl protein UP12_RS17000 PF12116 Stage III sporulation protein D UP12_RS17005 PF01047 MarR family UP12_RS17010 PF07690 Major Facilitator Superfamily UP12_RS17015 PF01569 PAP2 superfamily UP12_RS17020 PF07690 Major Facilitator Superfamily UP12_RS17025 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP12_RS17030 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS17035 PF00005 ABC transporter UP12_RS17040 PF00909 Ammonium Transporter Family UP12_RS17045 PF00543 Nitrogen regulatory protein P-II UP12_RS17050 PF01551 Peptidase family M23 UP12_RS17055 PF13420 Acetyltransferase (GNAT) domain UP12_RS17060 PF00578 AhpC/TSA family UP12_RS17065 PF07291 UP12_RS17065 UP12_RS17070 PF00005 ABC transporter UP12_RS17090 PF00471 Ribosomal protein L33 UP12_RS17095 PF02492 CobW/HypB/UreG, nucleotide-binding domain UP12_RS17095 PF07683 Cobalamin synthesis protein cobW C-terminal domain UP12_RS17100 PF00253 Ribosomal protein S14p/S29e UP12_RS17105 PF04055 Radical SAM superfamily UP12_RS17105 PF06463 Molybdenum Cofactor Synthesis C UP12_RS17105 PF13353 4Fe-4S single cluster domain UP12_RS17110 PF02634 FdhD/NarQ family UP12_RS17115 PF07690 Major Facilitator Superfamily UP12_RS17120 PF00384 Molybdopterin oxidoreductase UP12_RS17120 PF01568 Molydopterin dinucleotide binding domain UP12_RS17125 PF00092 von Willebrand factor type A domain UP12_RS17130 PF00092 von Willebrand factor type A domain UP12_RS17135 PF08486 UP12_RS17135 UP12_RS17140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UP12_RS17145 PF08680 Protein of unknown function (DUF1779) UP12_RS17150 PF06612 UP12_RS17150 UP12_RS17160 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain UP12_RS17160 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain UP12_RS17165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP12_RS17165 PF02874 ATP synthase alpha/beta family, beta-barrel domain UP12_RS17170 PF00231 ATP synthase UP12_RS17175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP12_RS17175 PF00306 ATP synthase alpha/beta chain, C terminal domain UP12_RS17175 PF02874 ATP synthase alpha/beta family, beta-barrel domain UP12_RS17180 PF00213 ATP synthase delta (OSCP) subunit UP12_RS17185 PF00430 ATP synthase B/B' CF(0) UP12_RS17190 PF00137 ATP synthase subunit C UP12_RS17195 PF00119 ATP synthase A chain UP12_RS17200 PF03899 UP12_RS17200 UP12_RS17205 PF14681 Uracil phosphoribosyltransferase UP12_RS17210 PF00464 Serine hydroxymethyltransferase UP12_RS17215 PF04260 Protein of unknown function (DUF436) UP12_RS17220 PF02502 Ribose/Galactose Isomerase UP12_RS17225 PF01451 Low molecular weight phosphotyrosine protein phosphatase UP12_RS17230 PF02659 UP12_RS17230 UP12_RS17235 PF01300 Telomere recombination UP12_RS17235 PF03481 Putative GTP-binding controlling metal-binding UP12_RS17245 PF09551 UP12_RS17245 UP12_RS17255 PF05175 Methyltransferase small domain UP12_RS17260 PF00472 RF-1 domain UP12_RS17260 PF03462 PCRF domain UP12_RS17265 PF13411 MerR HTH family regulatory protein UP12_RS17270 PF03547 UP12_RS17270 UP12_RS17275 PF00390 Malic enzyme, N-terminal domain UP12_RS17275 PF03949 Malic enzyme, NAD binding domain UP12_RS17280 PF00265 Thymidine kinase UP12_RS17285 PF01197 Ribosomal protein L31 UP12_RS17290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP12_RS17290 PF07497 Rho termination factor, RNA-binding domain UP12_RS17290 PF07498 Rho termination factor, N-terminal domain UP12_RS17295 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded UP12_RS17300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UP12_RS17305 PF00923 Transaldolase UP12_RS17310 PF01116 Fructose-bisphosphate aldolase class-II UP12_RS17315 PF00072 Response regulator receiver domain UP12_RS17320 PF10740 Protein of unknown function (DUF2529) UP12_RS17325 PF00117 Glutamine amidotransferase class-I UP12_RS17325 PF06418 CTP synthase N-terminus UP12_RS17330 PF05066 HB1, ASXL, restriction endonuclease HTH domain UP12_RS17340 PF00005 ABC transporter UP12_RS17345 PF01944 UP12_RS17345 UP12_RS17355 PF09221 Bacteriocin class IId cyclical uberolysin-like UP12_RS17365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP12_RS17365 PF02770 Acyl-CoA dehydrogenase, middle domain UP12_RS17365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP12_RS17370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP12_RS17370 PF02770 Acyl-CoA dehydrogenase, middle domain UP12_RS17370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP12_RS17375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UP12_RS17375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UP12_RS17380 PF00108 Thiolase, N-terminal domain UP12_RS17380 PF02803 Thiolase, C-terminal domain UP12_RS17385 PF02754 UP12_RS17385 UP12_RS17385 PF13183 4Fe-4S dicluster domain UP12_RS17390 PF13091 PLD-like domain UP12_RS17395 PF03851 UV-endonuclease UvdE UP12_RS17405 PF02016 LD-carboxypeptidase UP12_RS17410 PF00005 ABC transporter UP12_RS17410 PF00664 ABC transporter transmembrane region UP12_RS17415 PF13091 PLD-like domain UP12_RS17415 PF13396 UP12_RS17415 UP12_RS17420 PF02016 LD-carboxypeptidase UP12_RS17425 PF00750 tRNA synthetases class I (R) UP12_RS17425 PF03485 Arginyl tRNA synthetase N terminal domain UP12_RS17425 PF05746 DALR anticodon binding domain UP12_RS17430 PF09148 Domain of unknown function (DUF1934) UP12_RS17440 PF00491 Arginase family UP12_RS17445 PF01564 Spermine/spermidine synthase UP12_RS17450 PF00905 Penicillin binding protein transpeptidase domain UP12_RS17450 PF00912 Transglycosylase UP12_RS17455 PF08741 UP12_RS17455 UP12_RS17460 PF02163 Peptidase family M50 UP12_RS17465 PF01361 Tautomerase enzyme UP12_RS17470 PF13688 Metallo-peptidase family M12 UP12_RS17480 PF01966 HD domain UP12_RS17485 PF07293 UP12_RS17485 UP12_RS17500 PF00535 Glycosyl transferase family 2 UP12_RS17500 PF03552 Cellulose synthase UP12_RS17500 PF07238 PilZ domain UP12_RS17505 PF12688 Tetratrico peptide repeat UP12_RS17510 PF03099 Biotin/lipoate A/B protein ligase family UP12_RS17515 PF14568 SMI1-KNR4 cell-wall UP12_RS17525 PF04740 UP12_RS17525 UP12_RS17525 PF14449 UP12_RS17525 UP12_RS17535 PF16888 UP12_RS17535 UP12_RS17545 PF06808 UP12_RS17545 UP12_RS17550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP12_RS17550 PF09130 Domain of unknown function (DUF1932) UP12_RS17555 PF03737 Demethylmenaquinone methyltransferase UP12_RS17560 PF01380 SIS domain UP12_RS17560 PF01418 Helix-turn-helix domain, rpiR family UP12_RS17565 PF01515 Phosphate acetyl/butaryl transferase UP12_RS17570 PF06778 Chlorite dismutase UP12_RS17575 PF07690 Major Facilitator Superfamily UP12_RS17580 PF01037 AsnC family UP12_RS17580 PF13412 Winged helix-turn-helix DNA-binding UP12_RS17585 PF07690 Major Facilitator Superfamily UP12_RS17595 PF07883 Cupin domain UP12_RS17600 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS17605 PF13535 ATP-grasp domain UP12_RS17610 PF00155 Aminotransferase class I and II UP12_RS17615 PF13561 Enoyl-(Acyl carrier protein) reductase UP12_RS17620 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase UP12_RS17625 PF04321 RmlD substrate binding domain UP12_RS17630 PF16363 UP12_RS17630 UP12_RS17635 PF00483 Nucleotidyl transferase UP12_RS17640 PF04101 Glycosyltransferase family 28 C-terminal domain UP12_RS17645 PF02348 Cytidylyltransferase UP12_RS17650 PF03102 NeuB family UP12_RS17650 PF08666 SAF domain UP12_RS17655 PF00583 Acetyltransferase (GNAT) family UP12_RS17660 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UP12_RS17665 PF05159 UP12_RS17665 UP12_RS17670 PF00535 Glycosyl transferase family 2 UP12_RS17680 PF09671 UP12_RS17680 UP12_RS17685 PF00190 Cupin UP12_RS17690 PF04241 UP12_RS17690 UP12_RS17695 PF00860 Permease family UP12_RS17705 PF00171 Aldehyde dehydrogenase family UP12_RS17710 PF03167 Uracil DNA glycosylase superfamily UP12_RS17715 PF00535 Glycosyl transferase family 2 UP12_RS17720 PF11181 UP12_RS17720 UP12_RS17725 PF08543 Phosphomethylpyrimidine kinase UP12_RS17735 PF00251 Glycosyl hydrolases family 32 N-terminal domain UP12_RS17735 PF08244 Glycosyl hydrolases family 32 C terminal UP12_RS17740 PF00367 phosphotransferase system, EIIB UP12_RS17740 PF02378 Phosphotransferase system, EIIC UP12_RS17745 PF00874 PRD domain UP12_RS17745 PF03123 CAT RNA binding domain UP12_RS17755 PF00082 Subtilase family UP12_RS17755 PF02225 PA domain UP12_RS17755 PF05922 Peptidase inhibitor I9 UP12_RS17755 PF13860 FlgD Ig-like domain UP12_RS17765 PF00296 Luciferase-like monooxygenase UP12_RS17770 PF00881 Nitroreductase family UP12_RS17775 PF01098 UP12_RS17775 UP12_RS17785 PF03626 UP12_RS17785 UP12_RS17790 PF00510 Cytochrome c oxidase subunit III UP12_RS17795 PF00115 Cytochrome C and Quinol oxidase polypeptide I UP12_RS17800 PF02790 Cytochrome C oxidase subunit II, transmembrane domain UP12_RS17805 PF00557 Metallopeptidase family M24 UP12_RS17805 PF01321 Creatinase/Prolidase N-terminal domain UP12_RS17810 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain UP12_RS17810 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain UP12_RS17815 PF01370 NAD dependent epimerase/dehydratase family UP12_RS17820 PF00288 GHMP kinases N terminal domain UP12_RS17820 PF08544 GHMP kinases C terminal UP12_RS17820 PF10509 Galactokinase galactose-binding signature UP12_RS17825 PF02311 AraC-like ligand binding domain UP12_RS17825 PF12833 Helix-turn-helix domain UP12_RS17835 PF04138 UP12_RS17835 UP12_RS17840 PF08671 Anti-repressor SinI UP12_RS17845 PF13489 Methyltransferase domain UP12_RS17850 PF13712 Glycosyltransferase like family UP12_RS17855 PF04341 UP12_RS17855 UP12_RS17860 PF00474 Sodium:solute symporter family UP12_RS17865 PF14119 UP12_RS17865 UP12_RS17870 PF12680 SnoaL-like domain UP12_RS17875 PF02581 Thiamine monophosphate synthase/TENI UP12_RS17880 PF02110 Hydroxyethylthiazole kinase family UP12_RS17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS17885 PF03466 LysR substrate binding domain UP12_RS17890 PF03788 UP12_RS17890 UP12_RS17895 PF04172 UP12_RS17895 UP12_RS17900 PF10672 S-adenosylmethionine-dependent methyltransferase UP12_RS17905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS17910 PF00005 ABC transporter UP12_RS17915 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS17920 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP12_RS17925 PF13374 Tetratricopeptide repeat UP12_RS17930 PF04607 Region found in RelA / SpoT proteins UP12_RS17935 PF02653 UP12_RS17935 UP12_RS17940 PF00005 ABC transporter UP12_RS17945 PF13407 Periplasmic binding protein domain UP12_RS17950 PF07602 UP12_RS17950 UP12_RS17955 PF01063 Aminotransferase class IV UP12_RS17970 PF02056 Family 4 glycosyl hydrolase UP12_RS17970 PF11975 Family 4 glycosyl hydrolase C-terminal domain UP12_RS17975 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit UP12_RS17980 PF02378 Phosphotransferase system, EIIC UP12_RS17985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS17990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP12_RS17990 PF00874 PRD domain UP12_RS17990 PF05043 Mga helix-turn-helix domain UP12_RS17990 PF08279 HTH domain UP12_RS17995 PF04203 Sortase family UP12_RS18005 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP12_RS18005 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP12_RS18020 PF04542 Sigma-70 region 2 UP12_RS18020 PF08281 Sigma-70, region 4 UP12_RS18025 PF00544 Pectate lyase UP12_RS18030 PF00005 ABC transporter UP12_RS18030 PF00664 ABC transporter transmembrane region UP12_RS18035 PF00005 ABC transporter UP12_RS18035 PF00664 ABC transporter transmembrane region UP12_RS18040 PF02322 UP12_RS18040 UP12_RS18045 PF01654 UP12_RS18045 UP12_RS18050 PF00005 ABC transporter UP12_RS18050 PF03992 Antibiotic biosynthesis monooxygenase UP12_RS18055 PF01032 FecCD transport family UP12_RS18060 PF01497 Periplasmic binding protein UP12_RS18065 PF04203 Sortase family UP12_RS18070 PF00005 ABC transporter UP12_RS18075 PF01032 FecCD transport family UP12_RS18080 PF01497 Periplasmic binding protein UP12_RS18085 PF05031 Iron Transport-associated domain UP12_RS18090 PF05031 Iron Transport-associated domain UP12_RS18095 PF05031 Iron Transport-associated domain UP12_RS18100 PF01638 HxlR-like helix-turn-helix UP12_RS18105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS18110 PF00925 GTP cyclohydrolase II UP12_RS18115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP12_RS18115 PF01872 RibD C-terminal domain UP12_RS18120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS18125 PF01522 Polysaccharide deacetylase UP12_RS18130 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit UP12_RS18135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS18140 PF00232 Glycosyl hydrolase family 1 UP12_RS18145 PF03786 D-mannonate dehydratase (UxuA) UP12_RS18150 PF02378 Phosphotransferase system, EIIC UP12_RS18155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP12_RS18155 PF00874 PRD domain UP12_RS18155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP12_RS18155 PF05043 Mga helix-turn-helix domain UP12_RS18155 PF08279 HTH domain UP12_RS18165 PF16888 UP12_RS18165 UP12_RS18175 PF16888 UP12_RS18175 UP12_RS18180 PF03553 UP12_RS18180 UP12_RS18185 PF00206 Lyase UP12_RS18185 PF10415 Fumarase C C-terminus UP12_RS18190 PF00710 Asparaginase UP12_RS18195 PF01381 Helix-turn-helix UP12_RS18200 PF01381 Helix-turn-helix UP12_RS18220 PF06013 Proteins of 100 residues with WXG UP12_RS18225 PF01546 Peptidase family M20/M25/M40 UP12_RS18225 PF07687 Peptidase dimerisation domain UP12_RS18235 PF11738 Protein of unknown function (DUF3298) UP12_RS18235 PF13739 Domain of unknown function (DUF4163) UP12_RS18240 PF01380 SIS domain UP12_RS18240 PF01418 Helix-turn-helix domain, rpiR family UP12_RS18245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP12_RS18245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UP12_RS18250 PF07005 Protein of unknown function, DUF1537 UP12_RS18250 PF17042 UP12_RS18250 UP12_RS18255 PF02447 UP12_RS18255 UP12_RS18260 PF01717 Cobalamin-independent synthase, Catalytic domain UP12_RS18265 PF00232 Glycosyl hydrolase family 1 UP12_RS18270 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP12_RS18270 PF00367 phosphotransferase system, EIIB UP12_RS18270 PF02378 Phosphotransferase system, EIIC UP12_RS18275 PF00874 PRD domain UP12_RS18275 PF03123 CAT RNA binding domain UP12_RS18280 PF09234 Domain of unknown function (DUF1963) UP12_RS18285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS18290 PF02361 Cobalt transport protein UP12_RS18295 PF00005 ABC transporter UP12_RS18300 PF09819 UP12_RS18300 UP12_RS18305 PF03070 TENA/THI-4/PQQC family UP12_RS18315 PF01965 DJ-1/PfpI family UP12_RS18320 PF06993 UP12_RS18320 UP12_RS18325 PF10552 UP12_RS18325 UP12_RS18330 PF05547 UP12_RS18330 UP12_RS18335 PF03992 Antibiotic biosynthesis monooxygenase UP12_RS18340 PF00881 Nitroreductase family UP12_RS18345 PF01047 MarR family UP12_RS18350 PF00591 Glycosyl transferase family, a/b domain UP12_RS18350 PF02885 Glycosyl transferase family, helical bundle domain UP12_RS18350 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain UP12_RS18355 PF01773 Na+ dependent nucleoside transporter N-terminus UP12_RS18355 PF07662 Na+ dependent nucleoside transporter C-terminus UP12_RS18355 PF07670 Nucleoside recognition UP12_RS18360 PF01791 DeoC/LacD family aldolase UP12_RS18365 PF04198 Putative sugar-binding domain UP12_RS18365 PF04545 Sigma-70, region 4 UP12_RS18370 PF01263 Aldose 1-epimerase UP12_RS18385 PF00082 Subtilase family UP12_RS18390 PF01757 UP12_RS18390 UP12_RS18395 PF07690 Major Facilitator Superfamily UP12_RS18400 PF03435 Saccharopine dehydrogenase UP12_RS18405 PF13649 Methyltransferase domain UP12_RS18410 PF00196 Bacterial regulatory proteins, luxR family UP12_RS18410 PF01590 GAF domain UP12_RS18415 PF08282 haloacid dehalogenase-like hydrolase UP12_RS18420 PF13411 MerR HTH family regulatory protein UP12_RS18425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP12_RS18430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP12_RS18430 PF08447 PAS fold UP12_RS18435 PF00324 Amino acid permease UP12_RS18440 PF08713 DNA alkylation repair enzyme UP12_RS18445 PF02447 UP12_RS18445 UP12_RS18450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UP12_RS18450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UP12_RS18455 PF01380 SIS domain UP12_RS18455 PF01418 Helix-turn-helix domain, rpiR family UP12_RS18460 PF01156 Inosine-uridine preferring nucleoside hydrolase UP12_RS18475 PF11187 Protein of unknown function (DUF2974) UP12_RS18490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS18490 PF03466 LysR substrate binding domain UP12_RS18495 PF00356 Bacterial regulatory proteins, lacI family UP12_RS18495 PF13377 Periplasmic binding protein-like domain UP12_RS18500 PF13416 Bacterial extracellular solute-binding protein UP12_RS18505 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS18510 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS18515 PF07745 Glycosyl hydrolase family 53 UP12_RS18520 PF02449 Beta-galactosidase UP12_RS18520 PF08532 Beta-galactosidase trimerisation domain UP12_RS18520 PF08533 Beta-galactosidase C-terminal domain UP12_RS18525 PF03600 Citrate transporter UP12_RS18530 PF13273 UP12_RS18530 UP12_RS18535 PF12679 UP12_RS18535 UP12_RS18540 PF00005 ABC transporter UP12_RS18550 PF03831 PhnA protein UP12_RS18550 PF08274 PhnA Zinc-Ribbon UP12_RS18555 PF02595 Glycerate kinase family UP12_RS18560 PF02447 UP12_RS18560 UP12_RS18565 PF05651 UP12_RS18565 UP12_RS18565 PF13556 PucR C-terminal helix-turn-helix domain UP12_RS18570 PF00440 Bacterial regulatory proteins, tetR family UP12_RS18575 PF07690 Major Facilitator Superfamily UP12_RS18580 PF02687 UP12_RS18580 UP12_RS18585 PF00005 ABC transporter UP12_RS18600 PF00874 PRD domain UP12_RS18600 PF03123 CAT RNA binding domain UP12_RS18605 PF00232 Glycosyl hydrolase family 1 UP12_RS18610 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP12_RS18610 PF00367 phosphotransferase system, EIIB UP12_RS18610 PF02378 Phosphotransferase system, EIIC UP12_RS18625 PF03551 Transcriptional regulator PadR-like family UP12_RS18625 PF10400 Virulence activator alpha C-term UP12_RS18630 PF13826 UP12_RS18630 UP12_RS18635 PF00293 NUDIX domain UP12_RS18640 PF01381 Helix-turn-helix UP12_RS18645 PF11368 UP12_RS18645 UP12_RS18650 PF00324 Amino acid permease UP12_RS18655 PF00356 Bacterial regulatory proteins, lacI family UP12_RS18655 PF13377 Periplasmic binding protein-like domain UP12_RS18665 PF07690 Major Facilitator Superfamily UP12_RS18670 PF08501 Shikimate dehydrogenase substrate binding domain UP12_RS18675 PF07690 Major Facilitator Superfamily UP12_RS18685 PF02342 TerD domain UP12_RS18690 PF04471 Restriction endonuclease UP12_RS18695 PF00232 Glycosyl hydrolase family 1 UP12_RS18700 PF00392 Bacterial regulatory proteins, gntR family UP12_RS18700 PF07702 UTRA domain UP12_RS18705 PF15600 UP12_RS18705 UP12_RS18710 PF02567 Phenazine biosynthesis-like protein UP12_RS18715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP12_RS18715 PF03466 LysR substrate binding domain UP12_RS18720 PF04525 Tubby C 2 UP12_RS18735 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS18735 PF00672 HAMP domain UP12_RS18735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS18740 PF00072 Response regulator receiver domain UP12_RS18740 PF00486 Transcriptional regulatory protein, C terminal UP12_RS18745 PF03176 MMPL family UP12_RS18750 PF00753 Metallo-beta-lactamase superfamily UP12_RS18755 PF07690 Major Facilitator Superfamily UP12_RS18760 PF12840 Helix-turn-helix domain UP12_RS18785 PF10088 UP12_RS18785 UP12_RS18810 PF02590 Predicted SPOUT methyltransferase UP12_RS18815 PF02361 Cobalt transport protein UP12_RS18820 PF00005 ABC transporter UP12_RS18820 PF12558 UP12_RS18820 UP12_RS18825 PF07155 ECF-type riboflavin transporter, S component UP12_RS18830 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase UP12_RS18835 PF12679 UP12_RS18835 UP12_RS18840 PF00005 ABC transporter UP12_RS18845 PF00583 Acetyltransferase (GNAT) family UP12_RS18850 PF13180 PDZ domain UP12_RS18850 PF13365 Trypsin-like peptidase domain UP12_RS18855 PF00753 Metallo-beta-lactamase superfamily UP12_RS18860 PF09648 YycH protein UP12_RS18865 PF07435 YycH protein UP12_RS18870 PF00512 His Kinase A (phospho-acceptor) domain UP12_RS18870 PF00672 HAMP domain UP12_RS18870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS18870 PF13426 PAS domain UP12_RS18875 PF00072 Response regulator receiver domain UP12_RS18875 PF00486 Transcriptional regulatory protein, C terminal UP12_RS18900 PF00578 AhpC/TSA family UP12_RS18910 PF04235 UP12_RS18910 UP12_RS18915 PF00709 Adenylosuccinate synthetase UP12_RS18920 PF00440 Bacterial regulatory proteins, tetR family UP12_RS18920 PF14278 UP12_RS18920 UP12_RS18925 PF00067 Cytochrome P450 UP12_RS18930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS18935 PF00772 DnaB-like helicase N terminal domain UP12_RS18935 PF03796 DnaB-like helicase C terminal domain UP12_RS18940 PF16226 UP12_RS18940 UP12_RS18950 PF00756 Putative esterase UP12_RS18955 PF00106 short chain dehydrogenase UP12_RS18960 PF00425 chorismate binding enzyme UP12_RS18965 PF00501 AMP-binding enzyme UP12_RS18965 PF13193 AMP-binding enzyme C-terminal domain UP12_RS18970 PF00550 Phosphopantetheine attachment site UP12_RS18970 PF00857 Isochorismatase family UP12_RS18975 PF00501 AMP-binding enzyme UP12_RS18975 PF00550 Phosphopantetheine attachment site UP12_RS18975 PF00668 Condensation domain UP12_RS18975 PF00975 Thioesterase domain UP12_RS18975 PF13193 AMP-binding enzyme C-terminal domain UP12_RS18975 PF13745 HxxPF-repeated domain UP12_RS18980 PF03621 MbtH-like protein UP12_RS18985 PF01497 Periplasmic binding protein UP12_RS18985 PF12833 Helix-turn-helix domain UP12_RS18990 PF01497 Periplasmic binding protein UP12_RS18995 PF00756 Putative esterase UP12_RS19000 PF07690 Major Facilitator Superfamily UP12_RS19005 PF01281 Ribosomal protein L9, N-terminal domain UP12_RS19005 PF03948 Ribosomal protein L9, C-terminal domain UP12_RS19010 PF01368 DHH family UP12_RS19010 PF02272 DHHA1 domain UP12_RS19020 PF01368 DHH family UP12_RS19020 PF02833 DHHA2 domain UP12_RS19025 PF11738 Protein of unknown function (DUF3298) UP12_RS19025 PF13739 Domain of unknown function (DUF4163) UP12_RS19030 PF04542 Sigma-70 region 2 UP12_RS19030 PF08281 Sigma-70, region 4 UP12_RS19040 PF00199 Catalase UP12_RS19040 PF06628 Catalase-related immune-responsive UP12_RS19045 PF03358 NADPH-dependent FMN reductase UP12_RS19050 PF01738 Dienelactone hydrolase family UP12_RS19055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP12_RS19060 PF00528 Binding-protein-dependent transport system inner membrane component UP12_RS19060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system UP12_RS19065 PF00005 ABC transporter UP12_RS19070 PF01084 Ribosomal protein S18 UP12_RS19075 PF00436 Single-strand binding protein family UP12_RS19080 PF01250 Ribosomal protein S6 UP12_RS19085 PF01926 50S ribosome-binding GTPase UP12_RS19085 PF06071 Protein of unknown function (DUF933) UP12_RS19090 PF06107 UP12_RS19090 UP12_RS19110 PF06866 UP12_RS19110 UP12_RS19115 PF02195 ParB-like nuclease domain UP12_RS19115 PF08535 KorB domain UP12_RS19120 PF13614 AAA domain UP12_RS19125 PF05708 Orthopoxvirus protein of unknown function (DUF830) UP12_RS19130 PF02195 ParB-like nuclease domain UP12_RS19135 PF02527 rRNA small subunit methyltransferase G UP12_RS19140 PF01134 Glucose inhibited division protein A UP12_RS19140 PF13932 GidA associated domain 3 UP12_RS19145 PF01926 50S ribosome-binding GTPase UP12_RS19145 PF10396 GTP-binding protein TrmE N-terminus UP12_RS19145 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE UP12_RS19150 PF01424 R3H domain UP12_RS19150 PF13083 KH domain UP12_RS19150 PF14804 Jag N-terminus UP12_RS19155 PF02096 60Kd inner membrane protein UP12_RS19160 PF00825 Ribonuclease P UP12_RS19170 PF01336 OB-fold nucleic acid binding domain UP12_RS19175 PF00712 DNA polymerase III beta subunit, N-terminal domain UP12_RS19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP12_RS19230 PF00521 DNA gyrase/topoisomerase IV, subunit A UP12_RS19630 PF00004 ATPase family associated with various cellular activities (AAA)