VT48_RS00005 SM00382 ATPases associated with a variety of cellular activities VT48_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain VT48_RS00010 SM00480 DNA polymerase III beta subunit VT48_RS00030 SM00387 Histidine kinase-like ATPases VT48_RS00030 SM00433 TopoisomeraseII VT48_RS00035 SM00434 DNA Topoisomerase IV VT48_RS00110 SM00465 GIY-YIG type nucleases (URI domain) VT48_RS00120 SM00966 SpoVT / AbrB like domain VT48_RS00135 SM01208 VT48_RS00135 VT48_RS00140 SM00493 VT48_RS00140 VT48_RS00145 SM00650 Ribosomal RNA adenine dimethylases VT48_RS00190 SM01400 VT48_RS00190 VT48_RS00210 SM00487 DEAD-like helicases superfamily VT48_RS00210 SM00490 helicase superfamily c-terminal domain VT48_RS00210 SM00982 VT48_RS00210 VT48_RS00210 SM01058 CarD-like/TRCF domain VT48_RS00215 SM00966 SpoVT / AbrB like domain VT48_RS00230 SM00363 S4 RNA-binding domain VT48_RS00250 SM00316 Ribosomal protein S1-like RNA-binding domain VT48_RS00265 SM00331 Sigma factor PP2C-like phosphatases VT48_RS00265 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain VT48_RS00275 SM00220 Serine/Threonine protein kinases, catalytic domain VT48_RS00280 SM00977 TilS substrate C-terminal domain VT48_RS00290 SM00382 ATPases associated with a variety of cellular activities VT48_RS00335 SM00905 Dihydroneopterin aldolase VT48_RS00345 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS00390 SM00382 ATPases associated with a variety of cellular activities VT48_RS00390 SM01086 C-terminal, D2-small domain, of ClpB protein VT48_RS00395 SM00382 ATPases associated with a variety of cellular activities VT48_RS00405 SM00670 Large family of predicted nucleotide-binding domains VT48_RS00430 SM00840 VT48_RS00430 VT48_RS00435 SM00535 Ribonuclease III family VT48_RS00440 SM00967 RNA 2'-O ribose methyltransferase substrate binding VT48_RS00460 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VT48_RS00460 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VT48_RS00465 SM00649 Ribosomal protein L11/L12 VT48_RS00495 SM00663 RNA polymerase I subunit A N-terminus VT48_RS00515 SM00838 Elongation factor G C-terminus VT48_RS00515 SM00889 Elongation factor G, domain IV VT48_RS00530 SM01403 VT48_RS00530 VT48_RS00550 SM01382 VT48_RS00550 VT48_RS00550 SM01383 VT48_RS00550 VT48_RS00565 SM00322 K homology RNA-binding domain VT48_RS00585 SM01374 VT48_RS00585 VT48_RS00590 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VT48_RS00650 SM00316 Ribosomal protein S1-like RNA-binding domain VT48_RS00670 SM00662 RNA polymerases D VT48_RS00680 SM00382 ATPases associated with a variety of cellular activities VT48_RS00685 SM00382 ATPases associated with a variety of cellular activities VT48_RS00755 SM00646 VT48_RS00755 VT48_RS00770 SM01251 VT48_RS00770 VT48_RS00920 SM00382 ATPases associated with a variety of cellular activities VT48_RS00930 SM00382 ATPases associated with a variety of cellular activities VT48_RS00950 SM00382 ATPases associated with a variety of cellular activities VT48_RS00985 SM00382 ATPases associated with a variety of cellular activities VT48_RS01035 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS01040 SM00382 ATPases associated with a variety of cellular activities VT48_RS01050 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS01065 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS01110 SM00825 Beta-ketoacyl synthase VT48_RS01115 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS01125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VT48_RS01150 SM00450 Rhodanese Homology Domain VT48_RS01155 SM00450 Rhodanese Homology Domain VT48_RS01160 SM00450 Rhodanese Homology Domain VT48_RS01160 SM00849 Metallo-beta-lactamase superfamily VT48_RS01175 SM00946 Prolyl-tRNA synthetase, C-terminal VT48_RS01195 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS01225 SM00450 Rhodanese Homology Domain VT48_RS01240 SM01061 CAT RNA binding domain VT48_RS01275 SM00872 Alpha mannosidase, middle domain VT48_RS01380 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS01415 SM00387 Histidine kinase-like ATPases VT48_RS01420 SM00448 cheY-homologous receiver domain VT48_RS01440 SM00387 Histidine kinase-like ATPases VT48_RS01445 SM00448 cheY-homologous receiver domain VT48_RS01445 SM00850 LytTr DNA-binding domain VT48_RS01450 SM00382 ATPases associated with a variety of cellular activities VT48_RS01550 SM00116 Domain in cystathionine beta-synthase and other proteins. VT48_RS01550 SM00382 ATPases associated with a variety of cellular activities VT48_RS01595 SM00354 helix_turn _helix lactose operon repressor VT48_RS01710 SM00346 helix_turn_helix isocitrate lyase regulation VT48_RS01775 SM00062 Bacterial periplasmic substrate-binding proteins VT48_RS01790 SM00344 helix_turn_helix ASNC type VT48_RS01805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS01805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS01835 SM00382 ATPases associated with a variety of cellular activities VT48_RS01850 SM00823 Phosphopantetheine attachment site VT48_RS01855 SM00823 Phosphopantetheine attachment site VT48_RS01860 SM00823 Phosphopantetheine attachment site VT48_RS01865 SM00822 VT48_RS01865 VT48_RS01865 SM00823 Phosphopantetheine attachment site VT48_RS01870 SM00822 VT48_RS01870 VT48_RS01870 SM00823 Phosphopantetheine attachment site VT48_RS01875 SM00824 Thioesterase VT48_RS01890 SM00382 ATPases associated with a variety of cellular activities VT48_RS01910 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS01920 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS01920 SM00871 Bacterial transcription activator, effector binding domain VT48_RS01935 SM00382 ATPases associated with a variety of cellular activities VT48_RS01945 SM00062 Bacterial periplasmic substrate-binding proteins VT48_RS01965 SM00710 Parallel beta-helix repeats VT48_RS01980 SM00062 Bacterial periplasmic substrate-binding proteins VT48_RS01980 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VT48_RS01990 SM00382 ATPases associated with a variety of cellular activities VT48_RS02015 SM00448 cheY-homologous receiver domain VT48_RS02015 SM00862 Transcriptional regulatory protein, C terminal VT48_RS02020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS02020 SM00387 Histidine kinase-like ATPases VT48_RS02020 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS02025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VT48_RS02050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VT48_RS02065 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS02115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS02115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS02115 SM01049 VT48_RS02115 VT48_RS02130 SM00900 VT48_RS02130 VT48_RS02155 SM00894 Excalibur calcium-binding domain VT48_RS02180 SM00796 Allophanate hydrolase subunit 1 VT48_RS02185 SM00797 Allophanate hydrolase subunit 2 VT48_RS02190 SM00346 helix_turn_helix isocitrate lyase regulation VT48_RS02250 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS02250 SM00895 VT48_RS02250 VT48_RS02255 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS02265 SM01329 VT48_RS02265 VT48_RS02270 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VT48_RS02270 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VT48_RS02270 SM00493 VT48_RS02270 VT48_RS02280 SM00267 diguanylate cyclase VT48_RS02365 SM00091 PAS domain VT48_RS02365 SM00387 Histidine kinase-like ATPases VT48_RS02370 SM00448 cheY-homologous receiver domain VT48_RS02390 SM00382 ATPases associated with a variety of cellular activities VT48_RS02430 SM00487 DEAD-like helicases superfamily VT48_RS02430 SM00490 helicase superfamily c-terminal domain VT48_RS02460 SM01005 Alanine racemase, C-terminal domain VT48_RS02490 SM00331 Sigma factor PP2C-like phosphatases VT48_RS02510 SM00331 Sigma factor PP2C-like phosphatases VT48_RS02510 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain VT48_RS02515 SM00316 Ribosomal protein S1-like RNA-binding domain VT48_RS02515 SM00732 Likely ribonuclease with RNase H fold. VT48_RS02520 SM00731 SprT homologues. VT48_RS02530 SM00861 Transketolase, pyrimidine binding domain VT48_RS02545 SM00382 ATPases associated with a variety of cellular activities VT48_RS02590 SM00357 Cold shock protein domain VT48_RS02605 SM01061 CAT RNA binding domain VT48_RS02610 SM00829 Enoylreductase VT48_RS02615 SM00422 helix_turn_helix, mercury resistance VT48_RS02660 SM00870 VT48_RS02660 VT48_RS02670 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS02690 SM00850 LytTr DNA-binding domain VT48_RS02735 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS02755 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS02845 SM00116 Domain in cystathionine beta-synthase and other proteins. VT48_RS02845 SM01240 VT48_RS02845 VT48_RS02850 SM00936 Penicillin-binding protein 5, C-terminal domain VT48_RS02855 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS02875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS02895 SM00257 Lysin motif VT48_RS02895 SM00636 VT48_RS02895 VT48_RS02910 SM00382 ATPases associated with a variety of cellular activities VT48_RS02920 SM00493 VT48_RS02920 VT48_RS02985 SM00382 ATPases associated with a variety of cellular activities VT48_RS02995 SM00881 CoA binding domain VT48_RS03025 SM00883 Chaperonin 10 Kd subunit VT48_RS03035 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS03045 SM00287 Bacterial SH3 domain homologues VT48_RS03110 SM00460 Transglutaminase/protease-like homologues VT48_RS03130 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS03135 SM00917 LeuA allosteric (dimerisation) domain VT48_RS03210 SM01001 AIR carboxylase VT48_RS03220 SM00998 Adenylosuccinate lyase C-terminus VT48_RS03235 SM01211 VT48_RS03235 VT48_RS03260 SM00798 AICARFT/IMPCHase bienzyme VT48_RS03260 SM00851 MGS-like domain VT48_RS03265 SM01209 VT48_RS03265 VT48_RS03265 SM01210 VT48_RS03265 VT48_RS03290 SM00882 Coenzyme A transferase VT48_RS03295 SM00882 Coenzyme A transferase VT48_RS03350 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VT48_RS03350 SM00292 breast cancer carboxy-terminal domain VT48_RS03350 SM00532 Ligase N family VT48_RS03390 SM00845 GatB domain VT48_RS03410 SM00046 Diacylglycerol kinase catalytic domain (presumed) VT48_RS03425 SM00860 SMI1 / KNR4 family VT48_RS03565 SM00382 ATPases associated with a variety of cellular activities VT48_RS03575 SM00422 helix_turn_helix, mercury resistance VT48_RS03585 SM00382 ATPases associated with a variety of cellular activities VT48_RS03590 SM00487 DEAD-like helicases superfamily VT48_RS03590 SM00490 helicase superfamily c-terminal domain VT48_RS03595 SM00829 Enoylreductase VT48_RS03625 SM00320 WD40 repeats VT48_RS03660 SM00387 Histidine kinase-like ATPases VT48_RS03665 SM00448 cheY-homologous receiver domain VT48_RS03680 SM00631 VT48_RS03680 VT48_RS03750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS03750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS03765 SM00642 Alpha-amylase domain VT48_RS03770 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS03770 SM00866 VT48_RS03770 VT48_RS03805 SM00226 Low molecular weight phosphatase family VT48_RS03885 SM00478 endonuclease III VT48_RS03910 SM00422 helix_turn_helix, mercury resistance VT48_RS03910 SM00871 Bacterial transcription activator, effector binding domain VT48_RS03930 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VT48_RS04015 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS04025 SM00382 ATPases associated with a variety of cellular activities VT48_RS04050 SM00829 Enoylreductase VT48_RS04065 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS04085 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS04150 SM00835 Cupin VT48_RS04170 SM00478 endonuclease III VT48_RS04200 SM00382 ATPases associated with a variety of cellular activities VT48_RS04205 SM00382 ATPases associated with a variety of cellular activities VT48_RS04210 SM00382 ATPases associated with a variety of cellular activities VT48_RS04375 SM00855 Phosphoglycerate mutase family VT48_RS04420 SM00382 ATPases associated with a variety of cellular activities VT48_RS04425 SM00062 Bacterial periplasmic substrate-binding proteins VT48_RS04450 SM00382 ATPases associated with a variety of cellular activities VT48_RS04485 SM00567 E-Z type HEAT repeats VT48_RS04500 SM00763 PrkA AAA domain VT48_RS04530 SM00357 Cold shock protein domain VT48_RS04535 SM00267 diguanylate cyclase VT48_RS04565 SM00138 Methyltransferase, chemotaxis proteins VT48_RS04565 SM00387 Histidine kinase-like ATPases VT48_RS04565 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS04570 SM00318 Staphylococcal nuclease homologues VT48_RS04650 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VT48_RS04655 SM00421 helix_turn_helix, Lux Regulon VT48_RS04655 SM00448 cheY-homologous receiver domain VT48_RS04670 SM01060 VT48_RS04670 VT48_RS04690 SM00098 Alkaline phosphatase homologues VT48_RS04695 SM00257 Lysin motif VT48_RS04720 SM00563 Phosphate acyltransferases VT48_RS04725 SM01091 Transporter associated domain VT48_RS04735 SM01091 Transporter associated domain VT48_RS04785 SM00382 ATPases associated with a variety of cellular activities VT48_RS04790 SM00382 ATPases associated with a variety of cellular activities VT48_RS04805 SM00382 ATPases associated with a variety of cellular activities VT48_RS04845 SM00729 Elongator protein 3, MiaB family, Radical SAM VT48_RS04890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VT48_RS04925 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS04955 SM00382 ATPases associated with a variety of cellular activities VT48_RS05025 SM00849 Metallo-beta-lactamase superfamily VT48_RS05055 SM00855 Phosphoglycerate mutase family VT48_RS05060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS05075 SM00914 VT48_RS05075 VT48_RS05085 SM01119 VT48_RS05085 VT48_RS05095 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS05120 SM00382 ATPases associated with a variety of cellular activities VT48_RS05295 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS05330 SM01006 Siderophore biosynthesis protein domain VT48_RS05355 SM01018 B12 binding domain VT48_RS05370 SM00316 Ribosomal protein S1-like RNA-binding domain VT48_RS05380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS05380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS05435 SM00859 Semialdehyde dehydrogenase, NAD binding domain VT48_RS05455 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VT48_RS05460 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VT48_RS05515 SM00825 Beta-ketoacyl synthase VT48_RS05525 SM00382 ATPases associated with a variety of cellular activities VT48_RS05530 SM00382 ATPases associated with a variety of cellular activities VT48_RS05575 SM00382 ATPases associated with a variety of cellular activities VT48_RS05580 SM00382 ATPases associated with a variety of cellular activities VT48_RS05610 SM00155 Phospholipase D. Active site motifs. VT48_RS05645 SM01118 VT48_RS05645 VT48_RS05655 SM00954 Region found in RelA / SpoT proteins VT48_RS05825 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS06045 SM00257 Lysin motif VT48_RS06105 SM00644 VT48_RS06105 VT48_RS06140 SM00860 SMI1 / KNR4 family VT48_RS06160 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS06170 SM00028 Tetratricopeptide repeats VT48_RS06185 SM01059 Chloramphenicol acetyltransferase VT48_RS06190 SM00028 Tetratricopeptide repeats VT48_RS06200 SM00860 SMI1 / KNR4 family VT48_RS06265 SM01005 Alanine racemase, C-terminal domain VT48_RS06270 SM00829 Enoylreductase VT48_RS06280 SM00612 VT48_RS06280 VT48_RS06310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS06330 SM00257 Lysin motif VT48_RS06330 SM00644 VT48_RS06330 VT48_RS06355 SM01022 VT48_RS06355 VT48_RS06380 SM00382 ATPases associated with a variety of cellular activities VT48_RS06405 SM00829 Enoylreductase VT48_RS06415 SM00861 Transketolase, pyrimidine binding domain VT48_RS06420 SM01059 Chloramphenicol acetyltransferase VT48_RS06460 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VT48_RS06485 SM00382 ATPases associated with a variety of cellular activities VT48_RS06505 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VT48_RS06515 SM00382 ATPases associated with a variety of cellular activities VT48_RS06550 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS06575 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VT48_RS06585 SM00028 Tetratricopeptide repeats VT48_RS06600 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS06630 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS06635 SM00448 cheY-homologous receiver domain VT48_RS06635 SM00862 Transcriptional regulatory protein, C terminal VT48_RS06640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS06640 SM00387 Histidine kinase-like ATPases VT48_RS06640 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS06660 SM00116 Domain in cystathionine beta-synthase and other proteins. VT48_RS06660 SM00924 MgtE intracellular N domain VT48_RS06680 SM00422 helix_turn_helix, mercury resistance VT48_RS06695 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS06700 SM00052 Putative diguanylate phosphodiesterase VT48_RS06700 SM00267 diguanylate cyclase VT48_RS06760 SM00091 PAS domain VT48_RS06760 SM00387 Histidine kinase-like ATPases VT48_RS06760 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS06795 SM01007 Class II Aldolase and Adducin N-terminal domain VT48_RS06810 SM00387 Histidine kinase-like ATPases VT48_RS06810 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS06815 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS06830 SM00382 ATPases associated with a variety of cellular activities VT48_RS06830 SM01086 C-terminal, D2-small domain, of ClpB protein VT48_RS06905 SM00354 helix_turn _helix lactose operon repressor VT48_RS06910 SM01061 CAT RNA binding domain VT48_RS06940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS06940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS06965 SM00091 PAS domain VT48_RS06965 SM00387 Histidine kinase-like ATPases VT48_RS06965 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS06990 SM00260 Two component signalling adaptor domain VT48_RS06990 SM00448 cheY-homologous receiver domain VT48_RS07000 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS07020 SM00257 Lysin motif VT48_RS07035 SM00052 Putative diguanylate phosphodiesterase VT48_RS07140 SM00852 Probable molybdopterin binding domain VT48_RS07175 SM00382 ATPases associated with a variety of cellular activities VT48_RS07185 SM00420 helix_turn_helix, Deoxyribose operon repressor VT48_RS07185 SM01134 VT48_RS07185 VT48_RS07210 SM00382 ATPases associated with a variety of cellular activities VT48_RS07225 SM00966 SpoVT / AbrB like domain VT48_RS07230 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VT48_RS07230 SM00091 PAS domain VT48_RS07230 SM00387 Histidine kinase-like ATPases VT48_RS07230 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS07250 SM00849 Metallo-beta-lactamase superfamily VT48_RS07285 SM00861 Transketolase, pyrimidine binding domain VT48_RS07360 SM00838 Elongation factor G C-terminus VT48_RS07380 SM00670 Large family of predicted nucleotide-binding domains VT48_RS07405 SM00878 Biotin carboxylase C-terminal domain VT48_RS07455 SM00116 Domain in cystathionine beta-synthase and other proteins. VT48_RS07510 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VT48_RS07530 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains VT48_RS07565 SM00740 VT48_RS07565 VT48_RS07570 SM00740 VT48_RS07570 VT48_RS07625 SM00842 Cell division protein FtsA VT48_RS07630 SM00864 Tubulin/FtsZ family, GTPase domain VT48_RS07630 SM00865 Tubulin/FtsZ family, C-terminal domain VT48_RS07660 SM00858 VT48_RS07660 VT48_RS07685 SM00382 ATPases associated with a variety of cellular activities VT48_RS07715 SM00363 S4 RNA-binding domain VT48_RS07740 SM00363 S4 RNA-binding domain VT48_RS07765 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VT48_RS07770 SM00851 MGS-like domain VT48_RS07770 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VT48_RS07770 SM01209 VT48_RS07770 VT48_RS07785 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VT48_RS07835 SM00831 Cation transporter/ATPase, N-terminus VT48_RS07850 SM00072 Guanylate kinase homologues. VT48_RS07855 SM01409 VT48_RS07855 VT48_RS07865 SM00487 DEAD-like helicases superfamily VT48_RS07865 SM00490 helicase superfamily c-terminal domain VT48_RS07890 SM00331 Sigma factor PP2C-like phosphatases VT48_RS07890 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain VT48_RS07895 SM00220 Serine/Threonine protein kinases, catalytic domain VT48_RS07895 SM00740 VT48_RS07895 VT48_RS07910 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain VT48_RS07930 SM01120 VT48_RS07930 VT48_RS07930 SM01121 VT48_RS07930 VT48_RS07945 SM00487 DEAD-like helicases superfamily VT48_RS07945 SM00490 helicase superfamily c-terminal domain VT48_RS07960 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VT48_RS07965 SM00822 VT48_RS07965 VT48_RS07975 SM00358 Double-stranded RNA binding motif VT48_RS07975 SM00535 Ribonuclease III family VT48_RS07980 SM00968 SMC proteins Flexible Hinge Domain VT48_RS07985 SM00382 ATPases associated with a variety of cellular activities VT48_RS07985 SM00962 SRP54-type protein, GTPase domain VT48_RS07985 SM00963 SRP54-type protein, helical bundle domain VT48_RS07995 SM00382 ATPases associated with a variety of cellular activities VT48_RS07995 SM00962 SRP54-type protein, GTPase domain VT48_RS07995 SM00963 SRP54-type protein, helical bundle domain VT48_RS08055 SM00881 CoA binding domain VT48_RS08065 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VT48_RS08065 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VT48_RS08065 SM00493 VT48_RS08065 VT48_RS08085 SM00382 ATPases associated with a variety of cellular activities VT48_RS08085 SM01086 C-terminal, D2-small domain, of ClpB protein VT48_RS08125 SM00382 ATPases associated with a variety of cellular activities VT48_RS08175 SM00448 cheY-homologous receiver domain VT48_RS08210 SM00962 SRP54-type protein, GTPase domain VT48_RS08220 SM00448 cheY-homologous receiver domain VT48_RS08225 SM00073 Histidine Phosphotransfer domain VT48_RS08225 SM00260 Two component signalling adaptor domain VT48_RS08225 SM00387 Histidine kinase-like ATPases VT48_RS08225 SM01231 VT48_RS08225 VT48_RS08230 SM00260 Two component signalling adaptor domain VT48_RS08290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VT48_RS08300 SM00479 VT48_RS08300 VT48_RS08300 SM00481 DNA polymerase alpha chain like domain VT48_RS08305 SM01067 Cellulose binding domain VT48_RS08315 SM00633 Glycosyl hydrolase family 10 VT48_RS08330 SM00316 Ribosomal protein S1-like RNA-binding domain VT48_RS08330 SM00322 K homology RNA-binding domain VT48_RS08365 SM00904 Riboflavin kinase VT48_RS08370 SM01387 VT48_RS08370 VT48_RS08375 SM00316 Ribosomal protein S1-like RNA-binding domain VT48_RS08375 SM00322 K homology RNA-binding domain VT48_RS08410 SM00859 Semialdehyde dehydrogenase, NAD binding domain VT48_RS08420 SM01130 VT48_RS08420 VT48_RS08425 SM00849 Metallo-beta-lactamase superfamily VT48_RS08440 SM00382 ATPases associated with a variety of cellular activities VT48_RS08440 SM00843 VT48_RS08440 VT48_RS08445 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS08445 SM00866 VT48_RS08445 VT48_RS08470 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS08505 SM00852 Probable molybdopterin binding domain VT48_RS08510 SM00382 ATPases associated with a variety of cellular activities VT48_RS08515 SM00322 K homology RNA-binding domain VT48_RS08515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VT48_RS08535 SM00829 Enoylreductase VT48_RS08545 SM00729 Elongator protein 3, MiaB family, Radical SAM VT48_RS08560 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VT48_RS08560 SM00534 ATPase domain of DNA mismatch repair MUTS family VT48_RS08565 SM00853 MutL C terminal dimerisation domain VT48_RS08565 SM01340 VT48_RS08565 VT48_RS08585 SM01058 CarD-like/TRCF domain VT48_RS08595 SM00028 Tetratricopeptide repeats VT48_RS08680 SM00646 VT48_RS08680 VT48_RS08685 SM00382 ATPases associated with a variety of cellular activities VT48_RS08700 SM00422 helix_turn_helix, mercury resistance VT48_RS08705 SM01230 VT48_RS08705 VT48_RS08725 SM00860 SMI1 / KNR4 family VT48_RS08745 SM00829 Enoylreductase VT48_RS08750 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS08770 SM00506 Appr-1"-p processing enzyme VT48_RS08780 SM00014 Acid phosphatase homologues VT48_RS08830 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen VT48_RS08900 SM00020 Trypsin-like serine protease VT48_RS08935 SM00257 Lysin motif VT48_RS08940 SM00857 Resolvase, N terminal domain VT48_RS08950 SM00861 Transketolase, pyrimidine binding domain VT48_RS09035 SM01207 VT48_RS09035 VT48_RS09040 SM00881 CoA binding domain VT48_RS09045 SM00387 Histidine kinase-like ATPases VT48_RS09045 SM00433 TopoisomeraseII VT48_RS09050 SM00434 DNA Topoisomerase IV VT48_RS09065 SM01329 VT48_RS09065 VT48_RS09070 SM01266 VT48_RS09070 VT48_RS09075 SM00226 Low molecular weight phosphatase family VT48_RS09085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VT48_RS09175 SM00422 helix_turn_helix, mercury resistance VT48_RS09190 SM01061 CAT RNA binding domain VT48_RS09200 SM00387 Histidine kinase-like ATPases VT48_RS09200 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS09205 SM00448 cheY-homologous receiver domain VT48_RS09205 SM00862 Transcriptional regulatory protein, C terminal VT48_RS09215 SM00606 Cellulose Binding Domain Type IV VT48_RS09245 SM00354 helix_turn _helix lactose operon repressor VT48_RS09280 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS09290 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS09325 SM00155 Phospholipase D. Active site motifs. VT48_RS09335 SM00100 Cyclic nucleotide-monophosphate binding domain VT48_RS09385 SM00878 Biotin carboxylase C-terminal domain VT48_RS09410 SM00420 helix_turn_helix, Deoxyribose operon repressor VT48_RS09410 SM01134 VT48_RS09410 VT48_RS09530 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VT48_RS09560 SM00382 ATPases associated with a variety of cellular activities VT48_RS09565 SM00382 ATPases associated with a variety of cellular activities VT48_RS09570 SM00422 helix_turn_helix, mercury resistance VT48_RS09585 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VT48_RS09600 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VT48_RS09665 SM00849 Metallo-beta-lactamase superfamily VT48_RS09670 SM00871 Bacterial transcription activator, effector binding domain VT48_RS09685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VT48_RS09725 SM00257 Lysin motif VT48_RS09730 SM00341 Helicase and RNase D C-terminal VT48_RS09730 SM00487 DEAD-like helicases superfamily VT48_RS09730 SM00490 helicase superfamily c-terminal domain VT48_RS09730 SM00956 VT48_RS09730 VT48_RS09785 SM00861 Transketolase, pyrimidine binding domain VT48_RS09790 SM00327 von Willebrand factor (vWF) type A domain VT48_RS09795 SM00382 ATPases associated with a variety of cellular activities VT48_RS09805 SM00257 Lysin motif VT48_RS09870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VT48_RS09870 SM00245 tail specific protease VT48_RS09900 SM00014 Acid phosphatase homologues VT48_RS09925 SM00091 PAS domain VT48_RS09925 SM00382 ATPases associated with a variety of cellular activities VT48_RS09970 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS10070 SM00567 E-Z type HEAT repeats VT48_RS10070 SM00932 Scaffold protein Nfu/NifU N terminal VT48_RS10075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VT48_RS10105 SM00357 Cold shock protein domain VT48_RS10140 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VT48_RS10140 SM00475 5'-3' exonuclease VT48_RS10190 SM00491 VT48_RS10190 VT48_RS10200 SM00981 VT48_RS10200 VT48_RS10220 SM00487 DEAD-like helicases superfamily VT48_RS10220 SM00490 helicase superfamily c-terminal domain VT48_RS10280 SM00478 endonuclease III VT48_RS10280 SM00525 VT48_RS10280 VT48_RS10300 SM00479 VT48_RS10300 VT48_RS10300 SM00491 VT48_RS10300 VT48_RS10340 SM00851 MGS-like domain VT48_RS10390 SM00914 VT48_RS10390 VT48_RS10395 SM00028 Tetratricopeptide repeats VT48_RS10460 SM00138 Methyltransferase, chemotaxis proteins VT48_RS10465 SM00562 VT48_RS10465 VT48_RS10495 SM00411 bacterial (prokaryotic) histone like domain VT48_RS10540 SM01240 VT48_RS10540 VT48_RS10545 SM00316 Ribosomal protein S1-like RNA-binding domain VT48_RS10585 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VT48_RS10605 SM00257 Lysin motif VT48_RS10615 SM00487 DEAD-like helicases superfamily VT48_RS10615 SM00490 helicase superfamily c-terminal domain VT48_RS10640 SM00257 Lysin motif VT48_RS10655 SM00091 PAS domain VT48_RS10655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS10655 SM00387 Histidine kinase-like ATPases VT48_RS10655 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS10660 SM00448 cheY-homologous receiver domain VT48_RS10660 SM00862 Transcriptional regulatory protein, C terminal VT48_RS10680 SM00363 S4 RNA-binding domain VT48_RS10815 SM00387 Histidine kinase-like ATPases VT48_RS10825 SM00936 Penicillin-binding protein 5, C-terminal domain VT48_RS10900 SM00028 Tetratricopeptide repeats VT48_RS10970 SM00849 Metallo-beta-lactamase superfamily VT48_RS11015 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS11015 SM00866 VT48_RS11015 VT48_RS11055 SM01350 VT48_RS11055 VT48_RS11075 SM00260 Two component signalling adaptor domain VT48_RS11105 SM00382 ATPases associated with a variety of cellular activities VT48_RS11115 SM00062 Bacterial periplasmic substrate-binding proteins VT48_RS11115 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VT48_RS11125 SM00046 Diacylglycerol kinase catalytic domain (presumed) VT48_RS11140 SM00861 Transketolase, pyrimidine binding domain VT48_RS11160 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VT48_RS11170 SM00091 PAS domain VT48_RS11170 SM00382 ATPases associated with a variety of cellular activities VT48_RS11190 SM00448 cheY-homologous receiver domain VT48_RS11195 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VT48_RS11210 SM00363 S4 RNA-binding domain VT48_RS11215 SM00861 Transketolase, pyrimidine binding domain VT48_RS11250 SM00878 Biotin carboxylase C-terminal domain VT48_RS11295 SM00382 ATPases associated with a variety of cellular activities VT48_RS11305 SM00841 Elongation factor P, C-terminal VT48_RS11305 SM01185 VT48_RS11305 VT48_RS11340 SM00529 Helix-turn-helix diphteria tox regulatory element VT48_RS11350 SM00450 Rhodanese Homology Domain VT48_RS11370 SM00487 DEAD-like helicases superfamily VT48_RS11370 SM00490 helicase superfamily c-terminal domain VT48_RS11380 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS11440 SM00382 ATPases associated with a variety of cellular activities VT48_RS11465 SM00849 Metallo-beta-lactamase superfamily VT48_RS11485 SM00631 VT48_RS11485 VT48_RS11505 SM00028 Tetratricopeptide repeats VT48_RS11540 SM00382 ATPases associated with a variety of cellular activities VT48_RS11545 SM00382 ATPases associated with a variety of cellular activities VT48_RS11630 SM00382 ATPases associated with a variety of cellular activities VT48_RS11645 SM00518 AP endonuclease family 2 VT48_RS11650 SM00487 DEAD-like helicases superfamily VT48_RS11650 SM00490 helicase superfamily c-terminal domain VT48_RS11685 SM00400 zinc finger VT48_RS11685 SM00493 VT48_RS11685 VT48_RS11700 SM00116 Domain in cystathionine beta-synthase and other proteins. VT48_RS11740 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VT48_RS11790 SM00729 Elongator protein 3, MiaB family, Radical SAM VT48_RS11805 SM00271 DnaJ molecular chaperone homology domain VT48_RS11825 SM00729 Elongator protein 3, MiaB family, Radical SAM VT48_RS11830 SM00838 Elongation factor G C-terminus VT48_RS11865 SM00849 Metallo-beta-lactamase superfamily VT48_RS11875 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VT48_RS11895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VT48_RS11905 SM01103 VT48_RS11905 VT48_RS11940 SM00028 Tetratricopeptide repeats VT48_RS11955 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS11955 SM00895 VT48_RS11955 VT48_RS11970 SM00861 Transketolase, pyrimidine binding domain VT48_RS12035 SM00382 ATPases associated with a variety of cellular activities VT48_RS12065 SM01007 Class II Aldolase and Adducin N-terminal domain VT48_RS12075 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS12085 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS12100 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VT48_RS12185 SM00382 ATPases associated with a variety of cellular activities VT48_RS12190 SM00062 Bacterial periplasmic substrate-binding proteins VT48_RS12210 SM00829 Enoylreductase VT48_RS12250 SM00382 ATPases associated with a variety of cellular activities VT48_RS12355 SM00732 Likely ribonuclease with RNase H fold. VT48_RS12365 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VT48_RS12375 SM00382 ATPases associated with a variety of cellular activities VT48_RS12380 SM00062 Bacterial periplasmic substrate-binding proteins VT48_RS12380 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VT48_RS12410 SM00028 Tetratricopeptide repeats VT48_RS12430 SM00382 ATPases associated with a variety of cellular activities VT48_RS12450 SM00287 Bacterial SH3 domain homologues VT48_RS12450 SM00646 VT48_RS12450 VT48_RS12460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VT48_RS12460 SM00954 Region found in RelA / SpoT proteins VT48_RS12510 SM01323 VT48_RS12510 VT48_RS12530 SM00382 ATPases associated with a variety of cellular activities VT48_RS12535 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VT48_RS12570 SM00257 Lysin motif VT48_RS12615 SM01317 VT48_RS12615 VT48_RS12710 SM00257 Lysin motif VT48_RS12720 SM01004 Delta-aminolevulinic acid dehydratase VT48_RS12755 SM00382 ATPases associated with a variety of cellular activities VT48_RS12755 SM00464 Found in ATP-dependent protease La (LON) VT48_RS12760 SM00382 ATPases associated with a variety of cellular activities VT48_RS12765 SM00382 ATPases associated with a variety of cellular activities VT48_RS12765 SM00994 ClpX C4-type zinc finger VT48_RS12765 SM01086 C-terminal, D2-small domain, of ClpB protein VT48_RS12790 SM01329 VT48_RS12790 VT48_RS12795 SM00917 LeuA allosteric (dimerisation) domain VT48_RS12850 SM00612 VT48_RS12850 VT48_RS12905 SM00909 Sporulation and spore germination VT48_RS12915 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS12920 SM00421 helix_turn_helix, Lux Regulon VT48_RS12975 SM00465 GIY-YIG type nucleases (URI domain) VT48_RS12985 SM00813 Alpha-L-arabinofuranosidase C-terminus VT48_RS12990 SM00893 Electron transfer flavoprotein domain VT48_RS12995 SM00893 Electron transfer flavoprotein domain VT48_RS13025 SM00463 Small MutS-related domain VT48_RS13025 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VT48_RS13025 SM00534 ATPase domain of DNA mismatch repair MUTS family VT48_RS13030 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VT48_RS13030 SM00481 DNA polymerase alpha chain like domain VT48_RS13030 SM00483 DNA polymerase X family VT48_RS13050 SM00873 B3/4 domain VT48_RS13050 SM00874 tRNA synthetase B5 domain VT48_RS13050 SM00896 Ferredoxin-fold anticodon binding domain VT48_RS13060 SM00967 RNA 2'-O ribose methyltransferase substrate binding VT48_RS13115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VT48_RS13115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS13120 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VT48_RS13135 SM00382 ATPases associated with a variety of cellular activities VT48_RS13160 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VT48_RS13175 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VT48_RS13175 SM01232 VT48_RS13175 VT48_RS13180 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VT48_RS13180 SM00474 3'-5' exonuclease VT48_RS13180 SM00475 5'-3' exonuclease VT48_RS13180 SM00482 DNA polymerase A domain VT48_RS13185 SM00387 Histidine kinase-like ATPases VT48_RS13185 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS13190 SM00448 cheY-homologous receiver domain VT48_RS13190 SM00862 Transcriptional regulatory protein, C terminal VT48_RS13200 SM01329 VT48_RS13200 VT48_RS13245 SM00919 Malic enzyme, NAD binding domain VT48_RS13245 SM01274 VT48_RS13245 VT48_RS13250 SM00481 DNA polymerase alpha chain like domain VT48_RS13280 SM00116 Domain in cystathionine beta-synthase and other proteins. VT48_RS13285 SM00849 Metallo-beta-lactamase superfamily VT48_RS13310 SM00852 Probable molybdopterin binding domain VT48_RS13355 SM00487 DEAD-like helicases superfamily VT48_RS13355 SM00490 helicase superfamily c-terminal domain VT48_RS13370 SM00421 helix_turn_helix, Lux Regulon VT48_RS13370 SM00448 cheY-homologous receiver domain VT48_RS13380 SM00448 cheY-homologous receiver domain VT48_RS13380 SM00862 Transcriptional regulatory protein, C terminal VT48_RS13385 SM00387 Histidine kinase-like ATPases VT48_RS13400 SM00382 ATPases associated with a variety of cellular activities VT48_RS13420 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS13445 SM00981 VT48_RS13445 VT48_RS13480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VT48_RS13485 SM00363 S4 RNA-binding domain VT48_RS13485 SM01390 VT48_RS13485 VT48_RS13505 SM00487 DEAD-like helicases superfamily VT48_RS13535 SM00363 S4 RNA-binding domain VT48_RS13550 SM00116 Domain in cystathionine beta-synthase and other proteins. VT48_RS13560 SM00354 helix_turn _helix lactose operon repressor VT48_RS13565 SM00830 Chorismate mutase type II VT48_RS13590 SM00382 ATPases associated with a variety of cellular activities VT48_RS13590 SM00843 VT48_RS13590 VT48_RS13630 SM00919 Malic enzyme, NAD binding domain VT48_RS13630 SM01274 VT48_RS13630 VT48_RS13635 SM00849 Metallo-beta-lactamase superfamily VT48_RS13655 SM00046 Diacylglycerol kinase catalytic domain (presumed) VT48_RS13690 SM00420 helix_turn_helix, Deoxyribose operon repressor VT48_RS13695 SM00363 S4 RNA-binding domain VT48_RS13730 SM00450 Rhodanese Homology Domain VT48_RS13760 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS13810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VT48_RS13810 SM00091 PAS domain VT48_RS13825 SM00382 ATPases associated with a variety of cellular activities VT48_RS13835 SM00382 ATPases associated with a variety of cellular activities VT48_RS13840 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS13860 SM00729 Elongator protein 3, MiaB family, Radical SAM VT48_RS13925 SM00563 Phosphate acyltransferases VT48_RS13940 SM00382 ATPases associated with a variety of cellular activities VT48_RS14000 SM01234 VT48_RS14000 VT48_RS14005 SM00947 Carbonic anhydrase VT48_RS14035 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VT48_RS14210 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS14225 SM00244 prohibitin homologues VT48_RS14265 SM00644 VT48_RS14265 VT48_RS14340 SM00257 Lysin motif VT48_RS14415 SM00421 helix_turn_helix, Lux Regulon VT48_RS14435 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS14440 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS14450 SM00729 Elongator protein 3, MiaB family, Radical SAM VT48_RS14450 SM00876 Biotin and Thiamin Synthesis associated domain VT48_RS14485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS14485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS14485 SM00319 Homologues of the ligand binding domain of Tar VT48_RS14490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS14490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS14495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS14495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS14495 SM00319 Homologues of the ligand binding domain of Tar VT48_RS14500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS14500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS14500 SM00319 Homologues of the ligand binding domain of Tar VT48_RS14525 SM01091 Transporter associated domain VT48_RS14575 SM00316 Ribosomal protein S1-like RNA-binding domain VT48_RS14585 SM00344 helix_turn_helix ASNC type VT48_RS14605 SM00387 Histidine kinase-like ATPases VT48_RS14605 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS14610 SM01298 VT48_RS14610 VT48_RS14615 SM00479 VT48_RS14615 VT48_RS14640 SM00387 Histidine kinase-like ATPases VT48_RS14645 SM00448 cheY-homologous receiver domain VT48_RS14655 SM00382 ATPases associated with a variety of cellular activities VT48_RS14725 SM00421 helix_turn_helix, Lux Regulon VT48_RS14725 SM00448 cheY-homologous receiver domain VT48_RS14730 SM00387 Histidine kinase-like ATPases VT48_RS14755 SM00052 Putative diguanylate phosphodiesterase VT48_RS14805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VT48_RS14850 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VT48_RS14850 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VT48_RS14995 SM00729 Elongator protein 3, MiaB family, Radical SAM VT48_RS15040 SM00835 Cupin VT48_RS15100 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS15105 SM00448 cheY-homologous receiver domain VT48_RS15105 SM00862 Transcriptional regulatory protein, C terminal VT48_RS15165 SM00382 ATPases associated with a variety of cellular activities VT48_RS15190 SM00382 ATPases associated with a variety of cellular activities VT48_RS15190 SM00930 VT48_RS15190 VT48_RS15205 SM00493 VT48_RS15205 VT48_RS15255 SM00382 ATPases associated with a variety of cellular activities VT48_RS15270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VT48_RS15275 SM00448 cheY-homologous receiver domain VT48_RS15275 SM00862 Transcriptional regulatory protein, C terminal VT48_RS15280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS15280 SM00387 Histidine kinase-like ATPases VT48_RS15280 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS15315 SM00421 helix_turn_helix, Lux Regulon VT48_RS15315 SM00448 cheY-homologous receiver domain VT48_RS15320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS15320 SM00387 Histidine kinase-like ATPases VT48_RS15385 SM01130 VT48_RS15385 VT48_RS15390 SM00382 ATPases associated with a variety of cellular activities VT48_RS15405 SM00710 Parallel beta-helix repeats VT48_RS15410 SM00858 VT48_RS15410 VT48_RS15420 SM00354 helix_turn _helix lactose operon repressor VT48_RS15430 SM00387 Histidine kinase-like ATPases VT48_RS15430 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS15435 SM00448 cheY-homologous receiver domain VT48_RS15435 SM00862 Transcriptional regulatory protein, C terminal VT48_RS15440 SM00382 ATPases associated with a variety of cellular activities VT48_RS15470 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS15530 SM00382 ATPases associated with a variety of cellular activities VT48_RS15555 SM00448 cheY-homologous receiver domain VT48_RS15560 SM00387 Histidine kinase-like ATPases VT48_RS15600 SM00267 diguanylate cyclase VT48_RS15625 SM00316 Ribosomal protein S1-like RNA-binding domain VT48_RS15625 SM00357 Cold shock protein domain VT48_RS15625 SM00955 VT48_RS15625 VT48_RS15640 SM00966 SpoVT / AbrB like domain VT48_RS15645 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS15650 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS15655 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS15680 SM00116 Domain in cystathionine beta-synthase and other proteins. VT48_RS15680 SM00382 ATPases associated with a variety of cellular activities VT48_RS15720 SM00382 ATPases associated with a variety of cellular activities VT48_RS15730 SM01192 VT48_RS15730 VT48_RS15730 SM01193 VT48_RS15730 VT48_RS15750 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VT48_RS15770 SM00382 ATPases associated with a variety of cellular activities VT48_RS15775 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS15775 SM00895 VT48_RS15775 VT48_RS15795 SM00382 ATPases associated with a variety of cellular activities VT48_RS15800 SM00382 ATPases associated with a variety of cellular activities VT48_RS15885 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS15915 SM00382 ATPases associated with a variety of cellular activities VT48_RS15960 SM00947 Carbonic anhydrase VT48_RS16015 SM00028 Tetratricopeptide repeats VT48_RS16115 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS16115 SM00866 VT48_RS16115 VT48_RS16150 SM00382 ATPases associated with a variety of cellular activities VT48_RS16155 SM00487 DEAD-like helicases superfamily VT48_RS16155 SM00490 helicase superfamily c-terminal domain VT48_RS16185 SM00448 cheY-homologous receiver domain VT48_RS16185 SM00862 Transcriptional regulatory protein, C terminal VT48_RS16190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS16190 SM00387 Histidine kinase-like ATPases VT48_RS16190 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS16220 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VT48_RS16230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VT48_RS16230 SM00245 tail specific protease VT48_RS16250 SM00382 ATPases associated with a variety of cellular activities VT48_RS16275 SM00937 VT48_RS16275 VT48_RS16280 SM00957 SecA DEAD-like domain VT48_RS16280 SM00958 SecA preprotein cross-linking domain VT48_RS16290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS16290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS16370 SM00487 DEAD-like helicases superfamily VT48_RS16370 SM00490 helicase superfamily c-terminal domain VT48_RS16380 SM00421 helix_turn_helix, Lux Regulon VT48_RS16380 SM00448 cheY-homologous receiver domain VT48_RS16385 SM00387 Histidine kinase-like ATPases VT48_RS16430 SM00984 UDP binding domain VT48_RS16455 SM00646 VT48_RS16455 VT48_RS16460 SM00646 VT48_RS16460 VT48_RS16490 SM00382 ATPases associated with a variety of cellular activities VT48_RS16530 SM00047 Lysozyme subfamily 2 VT48_RS16530 SM00287 Bacterial SH3 domain homologues VT48_RS16555 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS16555 SM00448 cheY-homologous receiver domain VT48_RS16560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS16560 SM00387 Histidine kinase-like ATPases VT48_RS16585 SM00354 helix_turn _helix lactose operon repressor VT48_RS16640 SM00854 Bacterial capsule synthesis protein PGA_cap VT48_RS16670 SM00354 helix_turn _helix lactose operon repressor VT48_RS16685 SM00382 ATPases associated with a variety of cellular activities VT48_RS16700 SM00903 Flavin reductase like domain VT48_RS16720 SM00344 helix_turn_helix ASNC type VT48_RS16735 SM00984 UDP binding domain VT48_RS16745 SM00487 DEAD-like helicases superfamily VT48_RS16745 SM00490 helicase superfamily c-terminal domain VT48_RS16750 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VT48_RS16750 SM00091 PAS domain VT48_RS16780 SM00028 Tetratricopeptide repeats VT48_RS16805 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS16815 SM00014 Acid phosphatase homologues VT48_RS16825 SM00062 Bacterial periplasmic substrate-binding proteins VT48_RS16825 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VT48_RS16835 SM00382 ATPases associated with a variety of cellular activities VT48_RS16845 SM00938 Nitrogen regulatory protein P-II VT48_RS16870 SM00382 ATPases associated with a variety of cellular activities VT48_RS16895 SM00833 Cobalamin synthesis protein cobW C-terminal domain VT48_RS16905 SM00729 Elongator protein 3, MiaB family, Radical SAM VT48_RS16925 SM00327 von Willebrand factor (vWF) type A domain VT48_RS16930 SM00327 von Willebrand factor (vWF) type A domain VT48_RS16965 SM00382 ATPases associated with a variety of cellular activities VT48_RS17025 SM00226 Low molecular weight phosphatase family VT48_RS17060 SM00937 VT48_RS17060 VT48_RS17075 SM00919 Malic enzyme, NAD binding domain VT48_RS17075 SM01274 VT48_RS17075 VT48_RS17090 SM00357 Cold shock protein domain VT48_RS17090 SM00382 ATPases associated with a variety of cellular activities VT48_RS17090 SM00959 Rho termination factor, N-terminal domain VT48_RS17115 SM00448 cheY-homologous receiver domain VT48_RS17170 SM00155 Phospholipase D. Active site motifs. VT48_RS17195 SM00382 ATPases associated with a variety of cellular activities VT48_RS17200 SM00155 Phospholipase D. Active site motifs. VT48_RS17215 SM00836 DALR anticodon binding domain VT48_RS17215 SM01016 Arginyl tRNA synthetase N terminal dom VT48_RS17300 SM00062 Bacterial periplasmic substrate-binding proteins VT48_RS17310 SM00382 ATPases associated with a variety of cellular activities VT48_RS17320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VT48_RS17345 SM00028 Tetratricopeptide repeats VT48_RS17355 SM00860 SMI1 / KNR4 family VT48_RS17430 SM00344 helix_turn_helix ASNC type VT48_RS17500 SM00858 VT48_RS17500 VT48_RS17535 SM00835 Cupin VT48_RS17560 SM00986 Uracil DNA glycosylase superfamily VT48_RS17560 SM00987 UreE urease accessory protein, C-terminal domain VT48_RS17590 SM00640 Glycosyl hydrolases family 32 VT48_RS17600 SM01061 CAT RNA binding domain VT48_RS17680 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS17720 SM00028 Tetratricopeptide repeats VT48_RS17780 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VT48_RS17790 SM00382 ATPases associated with a variety of cellular activities VT48_RS17800 SM00062 Bacterial periplasmic substrate-binding proteins VT48_RS17800 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VT48_RS17810 SM00954 Region found in RelA / SpoT proteins VT48_RS17820 SM00382 ATPases associated with a variety of cellular activities VT48_RS17830 SM00710 Parallel beta-helix repeats VT48_RS17885 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VT48_RS17905 SM00656 VT48_RS17905 VT48_RS17910 SM00382 ATPases associated with a variety of cellular activities VT48_RS17915 SM00382 ATPases associated with a variety of cellular activities VT48_RS17930 SM00382 ATPases associated with a variety of cellular activities VT48_RS17950 SM00382 ATPases associated with a variety of cellular activities VT48_RS17965 SM00725 NEAr Transporter domain VT48_RS17970 SM00725 NEAr Transporter domain VT48_RS17975 SM00725 NEAr Transporter domain VT48_RS18070 SM00870 VT48_RS18070 VT48_RS18075 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS18080 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS18155 SM01061 CAT RNA binding domain VT48_RS18165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS18175 SM00382 ATPases associated with a variety of cellular activities VT48_RS18225 SM00347 helix_turn_helix multiple antibiotic resistance protein VT48_RS18225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VT48_RS18230 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VT48_RS18240 SM01133 VT48_RS18240 VT48_RS18275 SM00421 helix_turn_helix, Lux Regulon VT48_RS18285 SM00422 helix_turn_helix, mercury resistance VT48_RS18295 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VT48_RS18295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VT48_RS18365 SM00354 helix_turn _helix lactose operon repressor VT48_RS18410 SM00382 ATPases associated with a variety of cellular activities VT48_RS18450 SM00382 ATPases associated with a variety of cellular activities VT48_RS18460 SM00028 Tetratricopeptide repeats VT48_RS18465 SM01061 CAT RNA binding domain VT48_RS18505 SM00530 Helix-turn-helix XRE-family like proteins VT48_RS18520 SM00354 helix_turn _helix lactose operon repressor VT48_RS18545 SM01061 CAT RNA binding domain VT48_RS18605 SM00345 helix_turn_helix gluconate operon transcriptional repressor VT48_RS18605 SM00866 VT48_RS18605 VT48_RS18660 SM00849 Metallo-beta-lactamase superfamily VT48_RS18715 SM00382 ATPases associated with a variety of cellular activities VT48_RS18735 SM00382 ATPases associated with a variety of cellular activities VT48_RS18745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VT48_RS18750 SM00849 Metallo-beta-lactamase superfamily VT48_RS18765 SM00091 PAS domain VT48_RS18765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VT48_RS18765 SM00387 Histidine kinase-like ATPases VT48_RS18765 SM00388 His Kinase A (phosphoacceptor) domain VT48_RS18770 SM00448 cheY-homologous receiver domain VT48_RS18770 SM00862 Transcriptional regulatory protein, C terminal VT48_RS18810 SM00788 Adenylosuccinate synthetase VT48_RS18830 SM00382 ATPases associated with a variety of cellular activities VT48_RS18850 SM00342 helix_turn_helix, arabinose operon control protein VT48_RS18875 SM00267 diguanylate cyclase VT48_RS18885 SM01131 VT48_RS18885 VT48_RS18905 SM01060 VT48_RS18905 VT48_RS18930 SM00382 ATPases associated with a variety of cellular activities VT48_RS18980 SM00470 ParB-like nuclease domain VT48_RS18995 SM00470 ParB-like nuclease domain VT48_RS19005 SM01228 VT48_RS19005 VT48_RS19015 SM00393 Putative single-stranded nucleic acids-binding domain VT48_RS19015 SM01245 VT48_RS19015