BSA41_RS00005	SM00823	Phosphopantetheine attachment site
BSA41_RS00010	SM00823	Phosphopantetheine attachment site
BSA41_RS00015	SM00822	BSA41_RS00015
BSA41_RS00015	SM00823	Phosphopantetheine attachment site
BSA41_RS00020	SM00822	BSA41_RS00020
BSA41_RS00025	SM00824	Thioesterase
BSA41_RS00040	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS00060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS00080	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS00090	SM00062	Bacterial periplasmic substrate-binding proteins
BSA41_RS00115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS00115	SM00895	BSA41_RS00115
BSA41_RS00140	SM00710	Parallel beta-helix repeats
BSA41_RS00155	SM00062	Bacterial periplasmic substrate-binding proteins
BSA41_RS00155	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BSA41_RS00165	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS00185	SM00448	cheY-homologous receiver domain
BSA41_RS00185	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS00190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS00190	SM00387	Histidine kinase-like ATPases
BSA41_RS00190	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS00195	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BSA41_RS00220	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BSA41_RS00225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS00280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS00280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS00280	SM01049	BSA41_RS00280
BSA41_RS00305	SM00894	Excalibur calcium-binding domain
BSA41_RS00330	SM00796	Allophanate hydrolase subunit 1
BSA41_RS00335	SM00797	Allophanate hydrolase subunit 2
BSA41_RS00340	SM00346	helix_turn_helix isocitrate lyase regulation
BSA41_RS00410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS00410	SM00895	BSA41_RS00410
BSA41_RS00415	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS00425	SM01329	BSA41_RS00425
BSA41_RS00430	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BSA41_RS00430	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BSA41_RS00430	SM00493	BSA41_RS00430
BSA41_RS00440	SM00267	diguanylate cyclase
BSA41_RS00520	SM00091	PAS domain
BSA41_RS00520	SM00387	Histidine kinase-like ATPases
BSA41_RS00525	SM00448	cheY-homologous receiver domain
BSA41_RS00545	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS00590	SM00487	DEAD-like helicases superfamily
BSA41_RS00590	SM00490	helicase superfamily c-terminal domain
BSA41_RS00620	SM01005	Alanine racemase, C-terminal domain
BSA41_RS00650	SM00331	Sigma factor PP2C-like phosphatases
BSA41_RS00670	SM00331	Sigma factor PP2C-like phosphatases
BSA41_RS00675	SM00316	Ribosomal protein S1-like RNA-binding domain
BSA41_RS00675	SM00732	Likely ribonuclease with RNase H fold.
BSA41_RS00680	SM00731	SprT homologues.
BSA41_RS00690	SM00861	Transketolase, pyrimidine binding domain
BSA41_RS00705	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS00775	SM00357	Cold shock protein domain
BSA41_RS00790	SM00829	Enoylreductase
BSA41_RS00795	SM00422	helix_turn_helix, mercury resistance
BSA41_RS00845	SM00870	BSA41_RS00845
BSA41_RS00855	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS00910	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS00925	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS01035	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS01045	SM00881	CoA binding domain
BSA41_RS01075	SM00883	Chaperonin 10 Kd subunit
BSA41_RS01085	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS01165	SM00460	Transglutaminase/protease-like homologues
BSA41_RS01215	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS01220	SM00917	LeuA allosteric (dimerisation) domain
BSA41_RS01225	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS01230	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS01230	SM00871	Bacterial transcription activator, effector binding domain
BSA41_RS01300	SM01001	AIR carboxylase
BSA41_RS01310	SM00998	Adenylosuccinate lyase C-terminus
BSA41_RS01325	SM01211	BSA41_RS01325
BSA41_RS01350	SM00798	AICARFT/IMPCHase bienzyme
BSA41_RS01350	SM00851	MGS-like domain
BSA41_RS01355	SM01209	BSA41_RS01355
BSA41_RS01355	SM01210	BSA41_RS01355
BSA41_RS01380	SM00882	Coenzyme A transferase
BSA41_RS01385	SM00882	Coenzyme A transferase
BSA41_RS01435	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BSA41_RS01435	SM00292	breast cancer carboxy-terminal domain
BSA41_RS01435	SM00532	Ligase N family
BSA41_RS01470	SM00845	GatB domain
BSA41_RS01490	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BSA41_RS01505	SM00860	SMI1 / KNR4 family
BSA41_RS01660	SM00028	Tetratricopeptide repeats
BSA41_RS01665	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS01675	SM00422	helix_turn_helix, mercury resistance
BSA41_RS01685	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS01690	SM00487	DEAD-like helicases superfamily
BSA41_RS01690	SM00490	helicase superfamily c-terminal domain
BSA41_RS01695	SM00829	Enoylreductase
BSA41_RS01735	SM00320	WD40 repeats
BSA41_RS01755	SM00387	Histidine kinase-like ATPases
BSA41_RS01760	SM00448	cheY-homologous receiver domain
BSA41_RS01775	SM00631	BSA41_RS01775
BSA41_RS01845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS01845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS01860	SM00642	Alpha-amylase domain
BSA41_RS01865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS01865	SM00866	BSA41_RS01865
BSA41_RS01900	SM00226	Low molecular weight phosphatase family
BSA41_RS01990	SM00478	endonuclease III
BSA41_RS02020	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BSA41_RS02075	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS02085	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS02110	SM00829	Enoylreductase
BSA41_RS02140	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS02160	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS02225	SM00835	Cupin
BSA41_RS02250	SM00478	endonuclease III
BSA41_RS02250	SM00525	BSA41_RS02250
BSA41_RS02280	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS02285	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS02290	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS02450	SM00855	Phosphoglycerate mutase family
BSA41_RS02495	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS02510	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS02545	SM00567	E-Z type HEAT repeats
BSA41_RS02560	SM00763	PrkA AAA domain
BSA41_RS02590	SM00357	Cold shock protein domain
BSA41_RS02600	SM00267	diguanylate cyclase
BSA41_RS02630	SM00138	Methyltransferase, chemotaxis proteins 
BSA41_RS02630	SM00387	Histidine kinase-like ATPases
BSA41_RS02630	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS02635	SM00318	Staphylococcal nuclease homologues
BSA41_RS02710	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BSA41_RS02715	SM00421	helix_turn_helix, Lux Regulon
BSA41_RS02715	SM00448	cheY-homologous receiver domain
BSA41_RS02740	SM01060	BSA41_RS02740
BSA41_RS02760	SM00098	Alkaline phosphatase homologues
BSA41_RS02765	SM00257	Lysin motif
BSA41_RS02790	SM00563	Phosphate acyltransferases
BSA41_RS02795	SM01091	Transporter associated domain
BSA41_RS02800	SM00422	helix_turn_helix, mercury resistance
BSA41_RS02805	SM01091	Transporter associated domain
BSA41_RS02855	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS02860	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS02875	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS02915	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSA41_RS02965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSA41_RS03005	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS03040	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS03115	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS03145	SM00855	Phosphoglycerate mutase family
BSA41_RS03150	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS03165	SM00914	BSA41_RS03165
BSA41_RS03190	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS03195	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS03205	SM01040	BRO family, N-terminal domain
BSA41_RS03210	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS03425	SM00257	Lysin motif
BSA41_RS03530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS03580	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS03625	SM01022	BSA41_RS03625
BSA41_RS03725	SM00028	Tetratricopeptide repeats
BSA41_RS03860	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS03900	SM01006	Siderophore biosynthesis protein domain
BSA41_RS03930	SM01018	B12 binding domain
BSA41_RS03945	SM00316	Ribosomal protein S1-like RNA-binding domain
BSA41_RS03955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS03955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS04010	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BSA41_RS04030	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BSA41_RS04035	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BSA41_RS04035	SM01209	BSA41_RS04035
BSA41_RS04090	SM00825	Beta-ketoacyl synthase
BSA41_RS04100	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS04105	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS04160	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS04165	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS04195	SM00155	Phospholipase D. Active site motifs.
BSA41_RS04225	SM01118	BSA41_RS04225
BSA41_RS04235	SM00954	Region found in RelA / SpoT proteins
BSA41_RS04435	SM00829	Enoylreductase
BSA41_RS04440	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS04450	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS04465	SM01059	Chloramphenicol acetyltransferase
BSA41_RS04470	SM00028	Tetratricopeptide repeats
BSA41_RS04480	SM00860	SMI1 / KNR4 family
BSA41_RS04510	SM00028	Tetratricopeptide repeats
BSA41_RS04520	SM00871	Bacterial transcription activator, effector binding domain
BSA41_RS04535	SM01005	Alanine racemase, C-terminal domain
BSA41_RS04540	SM00612	BSA41_RS04540
BSA41_RS04575	SM00257	Lysin motif
BSA41_RS04575	SM00644	BSA41_RS04575
BSA41_RS04600	SM01022	BSA41_RS04600
BSA41_RS04625	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS04650	SM00829	Enoylreductase
BSA41_RS04660	SM00861	Transketolase, pyrimidine binding domain
BSA41_RS04665	SM01059	Chloramphenicol acetyltransferase
BSA41_RS04705	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSA41_RS04730	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS04750	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BSA41_RS04760	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS04795	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS04825	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BSA41_RS04835	SM00028	Tetratricopeptide repeats
BSA41_RS04850	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS04880	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS04885	SM00448	cheY-homologous receiver domain
BSA41_RS04885	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS04890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS04890	SM00387	Histidine kinase-like ATPases
BSA41_RS04890	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS04910	SM00116	Domain in cystathionine beta-synthase and other proteins.
BSA41_RS04910	SM00924	MgtE intracellular N domain
BSA41_RS04920	SM00422	helix_turn_helix, mercury resistance
BSA41_RS04930	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS04940	SM00052	Putative diguanylate phosphodiesterase
BSA41_RS04940	SM00267	diguanylate cyclase
BSA41_RS04995	SM00091	PAS domain
BSA41_RS04995	SM00387	Histidine kinase-like ATPases
BSA41_RS04995	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS05030	SM01007	Class II Aldolase and Adducin N-terminal domain
BSA41_RS05045	SM00387	Histidine kinase-like ATPases
BSA41_RS05045	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS05050	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS05065	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS05065	SM01086	C-terminal, D2-small domain, of ClpB protein
BSA41_RS05140	SM00354	helix_turn _helix lactose operon repressor
BSA41_RS05145	SM01061	CAT RNA binding domain
BSA41_RS05175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS05175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS05200	SM00091	PAS domain
BSA41_RS05200	SM00387	Histidine kinase-like ATPases
BSA41_RS05200	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS05225	SM00260	Two component signalling adaptor domain
BSA41_RS05225	SM00448	cheY-homologous receiver domain
BSA41_RS05235	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS05255	SM00257	Lysin motif
BSA41_RS05270	SM00052	Putative diguanylate phosphodiesterase
BSA41_RS05370	SM00852	Probable molybdopterin binding domain
BSA41_RS05405	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS05415	SM00420	helix_turn_helix, Deoxyribose operon repressor
BSA41_RS05415	SM01134	BSA41_RS05415
BSA41_RS05440	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS05455	SM00966	SpoVT / AbrB like domain 
BSA41_RS05460	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BSA41_RS05460	SM00091	PAS domain
BSA41_RS05460	SM00387	Histidine kinase-like ATPases
BSA41_RS05460	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS05480	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS05515	SM00861	Transketolase, pyrimidine binding domain
BSA41_RS05580	SM00838	Elongation factor G C-terminus
BSA41_RS05600	SM00670	Large family of predicted nucleotide-binding domains
BSA41_RS05625	SM00878	Biotin carboxylase C-terminal domain
BSA41_RS05675	SM00116	Domain in cystathionine beta-synthase and other proteins.
BSA41_RS05755	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
BSA41_RS05790	SM00740	BSA41_RS05790
BSA41_RS05800	SM00740	BSA41_RS05800
BSA41_RS05855	SM00842	Cell division protein FtsA
BSA41_RS05860	SM00864	Tubulin/FtsZ family, GTPase domain
BSA41_RS05860	SM00865	Tubulin/FtsZ family, C-terminal domain
BSA41_RS05890	SM00858	BSA41_RS05890
BSA41_RS05915	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS05945	SM00363	S4 RNA-binding domain
BSA41_RS05970	SM00363	S4 RNA-binding domain
BSA41_RS05995	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BSA41_RS06000	SM00851	MGS-like domain
BSA41_RS06000	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BSA41_RS06000	SM01209	BSA41_RS06000
BSA41_RS06015	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BSA41_RS06070	SM00831	Cation transporter/ATPase, N-terminus
BSA41_RS06085	SM00072	Guanylate kinase homologues.
BSA41_RS06090	SM01409	BSA41_RS06090
BSA41_RS06100	SM00487	DEAD-like helicases superfamily
BSA41_RS06100	SM00490	helicase superfamily c-terminal domain
BSA41_RS06125	SM00331	Sigma factor PP2C-like phosphatases
BSA41_RS06125	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BSA41_RS06130	SM00220	Serine/Threonine protein kinases, catalytic domain
BSA41_RS06130	SM00740	BSA41_RS06130
BSA41_RS06145	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BSA41_RS06165	SM01120	BSA41_RS06165
BSA41_RS06165	SM01121	BSA41_RS06165
BSA41_RS06180	SM00487	DEAD-like helicases superfamily
BSA41_RS06180	SM00490	helicase superfamily c-terminal domain
BSA41_RS06195	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BSA41_RS06200	SM00822	BSA41_RS06200
BSA41_RS06210	SM00358	Double-stranded RNA binding motif
BSA41_RS06210	SM00535	Ribonuclease III family
BSA41_RS06215	SM00968	SMC proteins Flexible Hinge Domain
BSA41_RS06220	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS06220	SM00962	SRP54-type protein, GTPase domain
BSA41_RS06220	SM00963	SRP54-type protein, helical bundle domain
BSA41_RS06230	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS06230	SM00962	SRP54-type protein, GTPase domain
BSA41_RS06230	SM00963	SRP54-type protein, helical bundle domain
BSA41_RS06290	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BSA41_RS06315	SM00881	CoA binding domain
BSA41_RS06325	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BSA41_RS06325	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BSA41_RS06325	SM00493	BSA41_RS06325
BSA41_RS06345	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS06345	SM01086	C-terminal, D2-small domain, of ClpB protein
BSA41_RS06385	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS06435	SM00448	cheY-homologous receiver domain
BSA41_RS06470	SM00962	SRP54-type protein, GTPase domain
BSA41_RS06480	SM00448	cheY-homologous receiver domain
BSA41_RS06485	SM00073	Histidine Phosphotransfer domain
BSA41_RS06485	SM00260	Two component signalling adaptor domain
BSA41_RS06485	SM00387	Histidine kinase-like ATPases
BSA41_RS06485	SM01231	BSA41_RS06485
BSA41_RS06490	SM00260	Two component signalling adaptor domain
BSA41_RS06550	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSA41_RS06560	SM00479	BSA41_RS06560
BSA41_RS06560	SM00481	DNA polymerase alpha chain like domain
BSA41_RS06565	SM01067	Cellulose binding domain
BSA41_RS06575	SM00633	Glycosyl hydrolase family 10
BSA41_RS06595	SM00316	Ribosomal protein S1-like RNA-binding domain
BSA41_RS06595	SM00322	K homology RNA-binding domain
BSA41_RS06630	SM00904	Riboflavin kinase
BSA41_RS06635	SM01387	BSA41_RS06635
BSA41_RS06640	SM00316	Ribosomal protein S1-like RNA-binding domain
BSA41_RS06640	SM00322	K homology RNA-binding domain
BSA41_RS06675	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BSA41_RS06685	SM01130	BSA41_RS06685
BSA41_RS06690	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS06705	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS06705	SM00843	BSA41_RS06705
BSA41_RS06710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS06710	SM00866	BSA41_RS06710
BSA41_RS06735	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS06760	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS06770	SM00852	Probable molybdopterin binding domain
BSA41_RS06775	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS06785	SM00322	K homology RNA-binding domain
BSA41_RS06785	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSA41_RS06805	SM00829	Enoylreductase
BSA41_RS06820	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSA41_RS06835	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BSA41_RS06835	SM00534	ATPase domain of DNA mismatch repair MUTS family
BSA41_RS06840	SM00853	MutL C terminal dimerisation domain
BSA41_RS06840	SM01340	BSA41_RS06840
BSA41_RS06860	SM01058	CarD-like/TRCF domain
BSA41_RS06870	SM00028	Tetratricopeptide repeats
BSA41_RS06950	SM00646	BSA41_RS06950
BSA41_RS06955	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS06970	SM00422	helix_turn_helix, mercury resistance
BSA41_RS06975	SM01230	BSA41_RS06975
BSA41_RS07050	SM00860	SMI1 / KNR4 family
BSA41_RS07080	SM00506	Appr-1"-p processing enzyme
BSA41_RS07090	SM00014	Acid phosphatase homologues
BSA41_RS07120	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BSA41_RS07175	SM00020	Trypsin-like serine protease
BSA41_RS07205	SM00257	Lysin motif
BSA41_RS07210	SM00857	Resolvase, N terminal domain
BSA41_RS07220	SM00861	Transketolase, pyrimidine binding domain
BSA41_RS07310	SM01207	BSA41_RS07310
BSA41_RS07315	SM00881	CoA binding domain
BSA41_RS07320	SM00387	Histidine kinase-like ATPases
BSA41_RS07320	SM00433	TopoisomeraseII
BSA41_RS07325	SM00434	DNA Topoisomerase IV
BSA41_RS07360	SM00226	Low molecular weight phosphatase family
BSA41_RS07370	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BSA41_RS07375	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BSA41_RS07435	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS07465	SM00420	helix_turn_helix, Deoxyribose operon repressor
BSA41_RS07465	SM01134	BSA41_RS07465
BSA41_RS07540	SM00422	helix_turn_helix, mercury resistance
BSA41_RS07555	SM01061	CAT RNA binding domain
BSA41_RS07565	SM00387	Histidine kinase-like ATPases
BSA41_RS07565	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS07570	SM00448	cheY-homologous receiver domain
BSA41_RS07570	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS07580	SM00606	Cellulose Binding Domain Type IV
BSA41_RS07610	SM00354	helix_turn _helix lactose operon repressor
BSA41_RS07655	SM00860	SMI1 / KNR4 family
BSA41_RS07665	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS07700	SM00155	Phospholipase D. Active site motifs.
BSA41_RS07710	SM00100	Cyclic nucleotide-monophosphate binding domain
BSA41_RS07765	SM00878	Biotin carboxylase C-terminal domain
BSA41_RS07790	SM00420	helix_turn_helix, Deoxyribose operon repressor
BSA41_RS07790	SM01134	BSA41_RS07790
BSA41_RS07930	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS07935	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS07940	SM00422	helix_turn_helix, mercury resistance
BSA41_RS07955	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BSA41_RS07970	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BSA41_RS08035	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS08040	SM00871	Bacterial transcription activator, effector binding domain
BSA41_RS08055	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BSA41_RS08095	SM00257	Lysin motif
BSA41_RS08105	SM00341	Helicase and RNase D C-terminal
BSA41_RS08105	SM00487	DEAD-like helicases superfamily
BSA41_RS08105	SM00490	helicase superfamily c-terminal domain
BSA41_RS08105	SM00956	BSA41_RS08105
BSA41_RS08170	SM00861	Transketolase, pyrimidine binding domain
BSA41_RS08175	SM00327	von Willebrand factor (vWF) type A domain
BSA41_RS08180	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS08190	SM00257	Lysin motif
BSA41_RS08255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSA41_RS08255	SM00245	tail specific protease
BSA41_RS08285	SM00014	Acid phosphatase homologues
BSA41_RS08315	SM00091	PAS domain
BSA41_RS08315	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS08360	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS08460	SM00567	E-Z type HEAT repeats
BSA41_RS08460	SM00932	Scaffold protein Nfu/NifU N terminal
BSA41_RS08465	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSA41_RS08495	SM00357	Cold shock protein domain
BSA41_RS08530	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BSA41_RS08530	SM00475	5'-3' exonuclease
BSA41_RS08575	SM00491	BSA41_RS08575
BSA41_RS08585	SM00981	BSA41_RS08585
BSA41_RS08615	SM00487	DEAD-like helicases superfamily
BSA41_RS08615	SM00490	helicase superfamily c-terminal domain
BSA41_RS08675	SM00478	endonuclease III
BSA41_RS08675	SM00525	BSA41_RS08675
BSA41_RS08700	SM00479	BSA41_RS08700
BSA41_RS08700	SM00491	BSA41_RS08700
BSA41_RS08740	SM00851	MGS-like domain
BSA41_RS08790	SM00914	BSA41_RS08790
BSA41_RS08795	SM00028	Tetratricopeptide repeats
BSA41_RS08860	SM00138	Methyltransferase, chemotaxis proteins 
BSA41_RS08865	SM00562	BSA41_RS08865
BSA41_RS08895	SM00411	bacterial (prokaryotic) histone like domain
BSA41_RS08945	SM01240	BSA41_RS08945
BSA41_RS08950	SM00316	Ribosomal protein S1-like RNA-binding domain
BSA41_RS08990	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BSA41_RS09010	SM00257	Lysin motif
BSA41_RS09020	SM00487	DEAD-like helicases superfamily
BSA41_RS09020	SM00490	helicase superfamily c-terminal domain
BSA41_RS09045	SM00257	Lysin motif
BSA41_RS09060	SM00091	PAS domain
BSA41_RS09060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS09060	SM00387	Histidine kinase-like ATPases
BSA41_RS09060	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS09065	SM00448	cheY-homologous receiver domain
BSA41_RS09065	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS09085	SM00363	S4 RNA-binding domain
BSA41_RS09225	SM00387	Histidine kinase-like ATPases
BSA41_RS09235	SM00936	Penicillin-binding protein 5, C-terminal domain 
BSA41_RS09315	SM00028	Tetratricopeptide repeats
BSA41_RS09375	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS09410	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS09420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS09420	SM00866	BSA41_RS09420
BSA41_RS09455	SM01350	BSA41_RS09455
BSA41_RS09480	SM00260	Two component signalling adaptor domain
BSA41_RS09510	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS09520	SM00062	Bacterial periplasmic substrate-binding proteins
BSA41_RS09520	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BSA41_RS09530	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BSA41_RS09545	SM00861	Transketolase, pyrimidine binding domain
BSA41_RS09565	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BSA41_RS09575	SM00091	PAS domain
BSA41_RS09575	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS09600	SM00448	cheY-homologous receiver domain
BSA41_RS09605	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSA41_RS09620	SM00363	S4 RNA-binding domain
BSA41_RS09625	SM00861	Transketolase, pyrimidine binding domain
BSA41_RS09660	SM00878	Biotin carboxylase C-terminal domain
BSA41_RS09705	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS09715	SM00841	Elongation factor P, C-terminal
BSA41_RS09715	SM01185	BSA41_RS09715
BSA41_RS09750	SM00529	Helix-turn-helix diphteria tox regulatory element
BSA41_RS09760	SM00450	Rhodanese Homology Domain
BSA41_RS09780	SM00487	DEAD-like helicases superfamily
BSA41_RS09780	SM00490	helicase superfamily c-terminal domain
BSA41_RS09795	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS09855	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS09880	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS09900	SM00631	BSA41_RS09900
BSA41_RS09920	SM00028	Tetratricopeptide repeats
BSA41_RS09950	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS09955	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS10045	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS10060	SM00518	AP endonuclease family 2
BSA41_RS10065	SM00487	DEAD-like helicases superfamily
BSA41_RS10065	SM00490	helicase superfamily c-terminal domain
BSA41_RS10100	SM00400	zinc finger
BSA41_RS10100	SM00493	BSA41_RS10100
BSA41_RS10115	SM00116	Domain in cystathionine beta-synthase and other proteins.
BSA41_RS10160	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSA41_RS10210	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSA41_RS10225	SM00271	DnaJ molecular chaperone homology domain
BSA41_RS10245	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSA41_RS10250	SM00838	Elongation factor G C-terminus
BSA41_RS10285	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS10295	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BSA41_RS10315	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSA41_RS10325	SM01103	BSA41_RS10325
BSA41_RS10360	SM00028	Tetratricopeptide repeats
BSA41_RS10430	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS10455	SM01007	Class II Aldolase and Adducin N-terminal domain
BSA41_RS10465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS10475	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS10490	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BSA41_RS10530	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS10535	SM00062	Bacterial periplasmic substrate-binding proteins
BSA41_RS10555	SM00829	Enoylreductase
BSA41_RS10580	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS10605	SM00825	Beta-ketoacyl synthase
BSA41_RS10635	SM00822	BSA41_RS10635
BSA41_RS10640	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BSA41_RS10760	SM00732	Likely ribonuclease with RNase H fold.
BSA41_RS10770	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BSA41_RS10780	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS10785	SM00062	Bacterial periplasmic substrate-binding proteins
BSA41_RS10785	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BSA41_RS10820	SM00028	Tetratricopeptide repeats
BSA41_RS10840	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS10865	SM00287	Bacterial SH3 domain homologues
BSA41_RS10865	SM00646	BSA41_RS10865
BSA41_RS10875	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSA41_RS10875	SM00954	Region found in RelA / SpoT proteins
BSA41_RS10925	SM01323	BSA41_RS10925
BSA41_RS10945	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS10950	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BSA41_RS10985	SM00257	Lysin motif
BSA41_RS11030	SM01317	BSA41_RS11030
BSA41_RS11125	SM00257	Lysin motif
BSA41_RS11135	SM01004	Delta-aminolevulinic acid dehydratase
BSA41_RS11175	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS11175	SM00464	Found in ATP-dependent protease La (LON)
BSA41_RS11180	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS11185	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS11185	SM00994	ClpX C4-type zinc finger
BSA41_RS11185	SM01086	C-terminal, D2-small domain, of ClpB protein
BSA41_RS11210	SM01329	BSA41_RS11210
BSA41_RS11215	SM00917	LeuA allosteric (dimerisation) domain
BSA41_RS11340	SM00909	Sporulation and spore germination
BSA41_RS11350	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS11355	SM00421	helix_turn_helix, Lux Regulon
BSA41_RS11415	SM00465	GIY-YIG type nucleases (URI domain)
BSA41_RS11425	SM00813	Alpha-L-arabinofuranosidase C-terminus
BSA41_RS11430	SM00893	Electron transfer flavoprotein domain
BSA41_RS11435	SM00893	Electron transfer flavoprotein domain
BSA41_RS11465	SM00463	Small MutS-related domain
BSA41_RS11465	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BSA41_RS11465	SM00534	ATPase domain of DNA mismatch repair MUTS family
BSA41_RS11470	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BSA41_RS11470	SM00481	DNA polymerase alpha chain like domain
BSA41_RS11470	SM00483	DNA polymerase X family
BSA41_RS11490	SM00873	B3/4 domain
BSA41_RS11490	SM00874	tRNA synthetase B5 domain
BSA41_RS11490	SM00896	Ferredoxin-fold anticodon binding domain
BSA41_RS11500	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BSA41_RS11555	SM00448	cheY-homologous receiver domain
BSA41_RS11555	SM00850	LytTr DNA-binding domain
BSA41_RS11560	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BSA41_RS11560	SM00387	Histidine kinase-like ATPases
BSA41_RS11570	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BSA41_RS11570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS11575	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BSA41_RS11590	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS11615	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BSA41_RS11630	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BSA41_RS11630	SM01232	BSA41_RS11630
BSA41_RS11635	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BSA41_RS11635	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BSA41_RS11635	SM00474	3'-5' exonuclease
BSA41_RS11635	SM00475	5'-3' exonuclease
BSA41_RS11635	SM00482	DNA polymerase A domain
BSA41_RS11640	SM00387	Histidine kinase-like ATPases
BSA41_RS11640	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS11645	SM00448	cheY-homologous receiver domain
BSA41_RS11645	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS11655	SM01329	BSA41_RS11655
BSA41_RS11700	SM00919	Malic enzyme, NAD binding domain
BSA41_RS11700	SM01274	BSA41_RS11700
BSA41_RS11705	SM00481	DNA polymerase alpha chain like domain
BSA41_RS11735	SM00116	Domain in cystathionine beta-synthase and other proteins.
BSA41_RS11740	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS11765	SM00852	Probable molybdopterin binding domain
BSA41_RS11810	SM00487	DEAD-like helicases superfamily
BSA41_RS11810	SM00490	helicase superfamily c-terminal domain
BSA41_RS11825	SM00421	helix_turn_helix, Lux Regulon
BSA41_RS11825	SM00448	cheY-homologous receiver domain
BSA41_RS11835	SM00448	cheY-homologous receiver domain
BSA41_RS11835	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS11840	SM00387	Histidine kinase-like ATPases
BSA41_RS11845	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS11865	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS11885	SM00981	BSA41_RS11885
BSA41_RS11920	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BSA41_RS11925	SM00363	S4 RNA-binding domain
BSA41_RS11925	SM01390	BSA41_RS11925
BSA41_RS11955	SM00363	S4 RNA-binding domain
BSA41_RS11970	SM00116	Domain in cystathionine beta-synthase and other proteins.
BSA41_RS11980	SM00354	helix_turn _helix lactose operon repressor
BSA41_RS11985	SM00830	Chorismate mutase type II
BSA41_RS12010	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS12010	SM00843	BSA41_RS12010
BSA41_RS12050	SM00919	Malic enzyme, NAD binding domain
BSA41_RS12050	SM01274	BSA41_RS12050
BSA41_RS12055	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS12115	SM00420	helix_turn_helix, Deoxyribose operon repressor
BSA41_RS12125	SM00363	S4 RNA-binding domain
BSA41_RS12160	SM00450	Rhodanese Homology Domain
BSA41_RS12190	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS12240	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BSA41_RS12240	SM00091	PAS domain
BSA41_RS12255	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS12265	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS12270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS12285	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSA41_RS12345	SM00563	Phosphate acyltransferases
BSA41_RS12360	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS12420	SM01234	BSA41_RS12420
BSA41_RS12425	SM00947	Carbonic anhydrase
BSA41_RS12460	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BSA41_RS12640	SM00244	prohibitin homologues
BSA41_RS12695	SM00644	BSA41_RS12695
BSA41_RS12775	SM00257	Lysin motif
BSA41_RS12855	SM00421	helix_turn_helix, Lux Regulon
BSA41_RS12875	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS12880	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS12890	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSA41_RS12890	SM00876	Biotin and Thiamin Synthesis associated domain
BSA41_RS12925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS12925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS12925	SM00319	Homologues of the ligand binding domain of Tar
BSA41_RS12930	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS12930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS12935	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS12935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS12935	SM00319	Homologues of the ligand binding domain of Tar
BSA41_RS12940	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS12940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS12940	SM00319	Homologues of the ligand binding domain of Tar
BSA41_RS12965	SM01091	Transporter associated domain
BSA41_RS13015	SM00316	Ribosomal protein S1-like RNA-binding domain
BSA41_RS13025	SM00344	helix_turn_helix ASNC type
BSA41_RS13045	SM00387	Histidine kinase-like ATPases
BSA41_RS13045	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS13050	SM01298	BSA41_RS13050
BSA41_RS13055	SM00479	BSA41_RS13055
BSA41_RS13080	SM00387	Histidine kinase-like ATPases
BSA41_RS13085	SM00448	cheY-homologous receiver domain
BSA41_RS13095	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS13160	SM00421	helix_turn_helix, Lux Regulon
BSA41_RS13160	SM00448	cheY-homologous receiver domain
BSA41_RS13165	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSA41_RS13165	SM00387	Histidine kinase-like ATPases
BSA41_RS13190	SM00052	Putative diguanylate phosphodiesterase
BSA41_RS13240	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSA41_RS13285	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BSA41_RS13285	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BSA41_RS13340	SM00422	helix_turn_helix, mercury resistance
BSA41_RS13435	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSA41_RS13470	SM00835	Cupin
BSA41_RS13525	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS13530	SM00448	cheY-homologous receiver domain
BSA41_RS13530	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS13580	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS13600	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS13600	SM00930	BSA41_RS13600
BSA41_RS13615	SM00493	BSA41_RS13615
BSA41_RS13670	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS13685	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSA41_RS13690	SM00448	cheY-homologous receiver domain
BSA41_RS13690	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS13695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS13695	SM00387	Histidine kinase-like ATPases
BSA41_RS13695	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS13735	SM00421	helix_turn_helix, Lux Regulon
BSA41_RS13735	SM00448	cheY-homologous receiver domain
BSA41_RS13740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS13740	SM00387	Histidine kinase-like ATPases
BSA41_RS13770	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS13795	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS13810	SM00710	Parallel beta-helix repeats
BSA41_RS13815	SM00858	BSA41_RS13815
BSA41_RS13825	SM00354	helix_turn _helix lactose operon repressor
BSA41_RS13835	SM00387	Histidine kinase-like ATPases
BSA41_RS13835	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS13840	SM00448	cheY-homologous receiver domain
BSA41_RS13840	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS13845	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS13875	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS13935	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS13960	SM00448	cheY-homologous receiver domain
BSA41_RS13965	SM00387	Histidine kinase-like ATPases
BSA41_RS14000	SM00267	diguanylate cyclase
BSA41_RS14030	SM00316	Ribosomal protein S1-like RNA-binding domain
BSA41_RS14030	SM00357	Cold shock protein domain
BSA41_RS14030	SM00955	BSA41_RS14030
BSA41_RS14045	SM00966	SpoVT / AbrB like domain 
BSA41_RS14050	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS14055	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS14060	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS14085	SM00116	Domain in cystathionine beta-synthase and other proteins.
BSA41_RS14085	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS14125	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS14135	SM01192	BSA41_RS14135
BSA41_RS14135	SM01193	BSA41_RS14135
BSA41_RS14155	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BSA41_RS14175	SM00091	PAS domain
BSA41_RS14175	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS14180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS14180	SM00895	BSA41_RS14180
BSA41_RS14200	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS14205	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS14290	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS14320	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS14325	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS14330	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS14410	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS14415	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS14455	SM00947	Carbonic anhydrase
BSA41_RS14510	SM00028	Tetratricopeptide repeats
BSA41_RS14610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS14610	SM00866	BSA41_RS14610
BSA41_RS14645	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS14650	SM00487	DEAD-like helicases superfamily
BSA41_RS14650	SM00490	helicase superfamily c-terminal domain
BSA41_RS14680	SM00448	cheY-homologous receiver domain
BSA41_RS14680	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS14685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS14685	SM00387	Histidine kinase-like ATPases
BSA41_RS14685	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS14715	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSA41_RS14725	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSA41_RS14725	SM00245	tail specific protease
BSA41_RS14745	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS14770	SM00937	BSA41_RS14770
BSA41_RS14780	SM00957	SecA DEAD-like domain
BSA41_RS14780	SM00958	SecA preprotein cross-linking domain
BSA41_RS14790	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS14790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS14870	SM00487	DEAD-like helicases superfamily
BSA41_RS14870	SM00490	helicase superfamily c-terminal domain
BSA41_RS14880	SM00421	helix_turn_helix, Lux Regulon
BSA41_RS14880	SM00448	cheY-homologous receiver domain
BSA41_RS14885	SM00387	Histidine kinase-like ATPases
BSA41_RS14930	SM00984	UDP binding domain
BSA41_RS14955	SM00646	BSA41_RS14955
BSA41_RS14960	SM00646	BSA41_RS14960
BSA41_RS14990	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS15030	SM00047	Lysozyme subfamily 2
BSA41_RS15030	SM00287	Bacterial SH3 domain homologues
BSA41_RS15055	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS15055	SM00448	cheY-homologous receiver domain
BSA41_RS15060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS15060	SM00387	Histidine kinase-like ATPases
BSA41_RS15085	SM00354	helix_turn _helix lactose operon repressor
BSA41_RS15140	SM00854	Bacterial capsule synthesis protein PGA_cap
BSA41_RS15170	SM00354	helix_turn _helix lactose operon repressor
BSA41_RS15185	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS15200	SM00903	Flavin reductase like domain
BSA41_RS15220	SM00344	helix_turn_helix ASNC type
BSA41_RS15235	SM00984	UDP binding domain
BSA41_RS15245	SM00487	DEAD-like helicases superfamily
BSA41_RS15245	SM00490	helicase superfamily c-terminal domain
BSA41_RS15250	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BSA41_RS15250	SM00091	PAS domain
BSA41_RS15280	SM00028	Tetratricopeptide repeats
BSA41_RS15305	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS15315	SM00014	Acid phosphatase homologues
BSA41_RS15325	SM00062	Bacterial periplasmic substrate-binding proteins
BSA41_RS15325	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BSA41_RS15335	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS15345	SM00938	Nitrogen regulatory protein P-II
BSA41_RS15370	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS15400	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BSA41_RS15410	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSA41_RS15430	SM00327	von Willebrand factor (vWF) type A domain
BSA41_RS15435	SM00327	von Willebrand factor (vWF) type A domain
BSA41_RS15470	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS15530	SM00226	Low molecular weight phosphatase family
BSA41_RS15565	SM00937	BSA41_RS15565
BSA41_RS15580	SM00919	Malic enzyme, NAD binding domain
BSA41_RS15580	SM01274	BSA41_RS15580
BSA41_RS15595	SM00357	Cold shock protein domain
BSA41_RS15595	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS15595	SM00959	Rho termination factor, N-terminal domain
BSA41_RS15620	SM00448	cheY-homologous receiver domain
BSA41_RS15645	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS15695	SM00155	Phospholipase D. Active site motifs.
BSA41_RS15720	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS15725	SM00155	Phospholipase D. Active site motifs.
BSA41_RS15740	SM00836	DALR anticodon binding domain
BSA41_RS15740	SM01016	Arginyl tRNA synthetase N terminal dom
BSA41_RS15815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSA41_RS15840	SM00028	Tetratricopeptide repeats
BSA41_RS15855	SM00860	SMI1 / KNR4 family
BSA41_RS15925	SM00344	helix_turn_helix ASNC type
BSA41_RS15995	SM00858	BSA41_RS15995
BSA41_RS16030	SM00835	Cupin
BSA41_RS16055	SM00986	Uracil DNA glycosylase superfamily
BSA41_RS16055	SM00987	UreE urease accessory protein, C-terminal domain 
BSA41_RS16095	SM00640	Glycosyl hydrolases family 32
BSA41_RS16105	SM01061	CAT RNA binding domain
BSA41_RS16185	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS16265	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BSA41_RS16275	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS16285	SM00062	Bacterial periplasmic substrate-binding proteins
BSA41_RS16285	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BSA41_RS16295	SM00954	Region found in RelA / SpoT proteins
BSA41_RS16305	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS16315	SM00710	Parallel beta-helix repeats
BSA41_RS16370	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BSA41_RS16390	SM00656	BSA41_RS16390
BSA41_RS16395	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS16400	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS16415	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS16435	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS16450	SM00725	NEAr Transporter domain
BSA41_RS16455	SM00725	NEAr Transporter domain
BSA41_RS16460	SM00725	NEAr Transporter domain
BSA41_RS16550	SM00870	BSA41_RS16550
BSA41_RS16555	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS16560	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS16640	SM01061	CAT RNA binding domain
BSA41_RS16650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS16660	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS16710	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS16710	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BSA41_RS16715	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BSA41_RS16725	SM01133	BSA41_RS16725
BSA41_RS16760	SM00421	helix_turn_helix, Lux Regulon
BSA41_RS16770	SM00422	helix_turn_helix, mercury resistance
BSA41_RS16780	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BSA41_RS16780	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS16840	SM00354	helix_turn _helix lactose operon repressor
BSA41_RS16885	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS16925	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS16935	SM00028	Tetratricopeptide repeats
BSA41_RS16940	SM01061	CAT RNA binding domain
BSA41_RS16970	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS16985	SM00354	helix_turn _helix lactose operon repressor
BSA41_RS17050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS17050	SM00866	BSA41_RS17050
BSA41_RS17090	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS17095	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS17095	SM00966	SpoVT / AbrB like domain 
BSA41_RS17110	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BSA41_RS17145	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS17165	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS17175	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSA41_RS17180	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS17195	SM00091	PAS domain
BSA41_RS17195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS17195	SM00387	Histidine kinase-like ATPases
BSA41_RS17195	SM00388	His Kinase A (phosphoacceptor) domain
BSA41_RS17200	SM00448	cheY-homologous receiver domain
BSA41_RS17200	SM00862	Transcriptional regulatory protein, C terminal
BSA41_RS17240	SM00788	Adenylosuccinate synthetase
BSA41_RS17250	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS17280	SM00822	BSA41_RS17280
BSA41_RS17300	SM00823	Phosphopantetheine attachment site
BSA41_RS17305	SM00923	MbtH-like protein
BSA41_RS17310	SM00342	helix_turn_helix, arabinose operon control protein
BSA41_RS17340	SM00267	diguanylate cyclase
BSA41_RS17350	SM01131	BSA41_RS17350
BSA41_RS17370	SM01060	BSA41_RS17370
BSA41_RS17395	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS17450	SM00470	ParB-like nuclease domain
BSA41_RS17465	SM00470	ParB-like nuclease domain
BSA41_RS17475	SM01228	BSA41_RS17475
BSA41_RS17485	SM00393	Putative single-stranded nucleic acids-binding domain
BSA41_RS17485	SM01245	BSA41_RS17485
BSA41_RS17505	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS17505	SM00760	Bacterial dnaA protein helix-turn-helix domain
BSA41_RS17510	SM00480	DNA polymerase III beta subunit
BSA41_RS17530	SM00387	Histidine kinase-like ATPases
BSA41_RS17530	SM00433	TopoisomeraseII
BSA41_RS17535	SM00434	DNA Topoisomerase IV
BSA41_RS17570	SM00116	Domain in cystathionine beta-synthase and other proteins.
BSA41_RS17570	SM01240	BSA41_RS17570
BSA41_RS17575	SM00936	Penicillin-binding protein 5, C-terminal domain 
BSA41_RS17580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSA41_RS17600	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS17625	SM00257	Lysin motif
BSA41_RS17625	SM00636	BSA41_RS17625
BSA41_RS17645	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS17655	SM00493	BSA41_RS17655
BSA41_RS17750	SM00465	GIY-YIG type nucleases (URI domain)
BSA41_RS17760	SM00966	SpoVT / AbrB like domain 
BSA41_RS17780	SM01208	BSA41_RS17780
BSA41_RS17785	SM00493	BSA41_RS17785
BSA41_RS17790	SM00650	Ribosomal RNA adenine dimethylases
BSA41_RS17835	SM01400	BSA41_RS17835
BSA41_RS17855	SM00487	DEAD-like helicases superfamily
BSA41_RS17855	SM00490	helicase superfamily c-terminal domain
BSA41_RS17855	SM00982	BSA41_RS17855
BSA41_RS17855	SM01058	CarD-like/TRCF domain
BSA41_RS17860	SM00966	SpoVT / AbrB like domain 
BSA41_RS17875	SM00363	S4 RNA-binding domain
BSA41_RS17895	SM00316	Ribosomal protein S1-like RNA-binding domain
BSA41_RS17910	SM00331	Sigma factor PP2C-like phosphatases
BSA41_RS17910	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BSA41_RS17920	SM00220	Serine/Threonine protein kinases, catalytic domain
BSA41_RS17925	SM00977	TilS substrate C-terminal domain
BSA41_RS17935	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS17980	SM00905	Dihydroneopterin aldolase
BSA41_RS17990	SM00530	Helix-turn-helix XRE-family like proteins 
BSA41_RS18095	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS18095	SM01086	C-terminal, D2-small domain, of ClpB protein
BSA41_RS18100	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS18110	SM00670	Large family of predicted nucleotide-binding domains
BSA41_RS18135	SM00840	BSA41_RS18135
BSA41_RS18140	SM00535	Ribonuclease III family
BSA41_RS18145	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BSA41_RS18170	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BSA41_RS18170	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BSA41_RS18175	SM00649	Ribosomal protein L11/L12
BSA41_RS18205	SM00663	RNA polymerase I subunit A N-terminus
BSA41_RS18225	SM00838	Elongation factor G C-terminus
BSA41_RS18225	SM00889	Elongation factor G, domain IV
BSA41_RS18240	SM01403	BSA41_RS18240
BSA41_RS18260	SM01382	BSA41_RS18260
BSA41_RS18260	SM01383	BSA41_RS18260
BSA41_RS18275	SM00322	K homology RNA-binding domain
BSA41_RS18295	SM01374	BSA41_RS18295
BSA41_RS18300	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BSA41_RS18365	SM00316	Ribosomal protein S1-like RNA-binding domain
BSA41_RS18385	SM00662	RNA polymerases D
BSA41_RS18395	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS18400	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS18460	SM00646	BSA41_RS18460
BSA41_RS18475	SM01251	BSA41_RS18475
BSA41_RS18620	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS18635	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS18710	SM00450	Rhodanese Homology Domain
BSA41_RS18715	SM00450	Rhodanese Homology Domain
BSA41_RS18720	SM00450	Rhodanese Homology Domain
BSA41_RS18720	SM00849	Metallo-beta-lactamase superfamily
BSA41_RS18735	SM00946	Prolyl-tRNA synthetase, C-terminal
BSA41_RS18750	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS18780	SM00450	Rhodanese Homology Domain
BSA41_RS18795	SM01061	CAT RNA binding domain
BSA41_RS18830	SM00872	Alpha mannosidase, middle domain
BSA41_RS18930	SM00829	Enoylreductase
BSA41_RS18935	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSA41_RS18970	SM00387	Histidine kinase-like ATPases
BSA41_RS18975	SM00448	cheY-homologous receiver domain
BSA41_RS18990	SM00421	helix_turn_helix, Lux Regulon
BSA41_RS18990	SM00448	cheY-homologous receiver domain
BSA41_RS19010	SM00387	Histidine kinase-like ATPases
BSA41_RS19015	SM00448	cheY-homologous receiver domain
BSA41_RS19015	SM00850	LytTr DNA-binding domain
BSA41_RS19020	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS19110	SM00116	Domain in cystathionine beta-synthase and other proteins.
BSA41_RS19110	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS19160	SM00354	helix_turn _helix lactose operon repressor
BSA41_RS19255	SM00346	helix_turn_helix isocitrate lyase regulation
BSA41_RS19265	SM01130	BSA41_RS19265
BSA41_RS19270	SM00354	helix_turn _helix lactose operon repressor
BSA41_RS19340	SM00062	Bacterial periplasmic substrate-binding proteins
BSA41_RS19355	SM00344	helix_turn_helix ASNC type
BSA41_RS19370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BSA41_RS19370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSA41_RS19395	SM00382	ATPases associated with a variety of cellular activities
BSA41_RS19410	SM00823	Phosphopantetheine attachment site
