locus-tag	class	description
DN407_RS00010	COG0592	DNA-directed DNA polymerase activity
DN407_RS00015	COG2501	S4 domain
DN407_RS00025	COG0187	DNA topoisomerase II activity
DN407_RS00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DN407_RS00065	COG0516	GMP reductase activity
DN407_RS00065	COG0517	IMP dehydrogenase activity
DN407_RS00070	COG1686	Belongs to the peptidase S11 family
DN407_RS00100	COG1428	Deoxynucleoside kinase
DN407_RS00105	COG1428	Deoxynucleoside kinase
DN407_RS00110	COG1335	isochorismatase
DN407_RS00120	COG0590	tRNA wobble adenosine to inosine editing
DN407_RS00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DN407_RS00185	COG1982	Orn Lys Arg decarboxylase major
DN407_RS00195	COG0470	DNA polymerase III
DN407_RS00200	COG1774	PSP1 C-terminal conserved region
DN407_RS00210	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DN407_RS00220	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DN407_RS00225	COG2002	toxin-antitoxin pair type II binding
DN407_RS00235	COG0084	hydrolase, TatD family'
DN407_RS00255	COG4466	Protein conserved in bacteria
DN407_RS00270	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DN407_RS00275	COG0251	oxidation-reduction process
DN407_RS00305	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DN407_RS00310	COG2002	toxin-antitoxin pair type II binding
DN407_RS00315	COG2244	polysaccharide biosynthetic process
DN407_RS00320	COG3956	TIGRFAM MazG family protein
DN407_RS00325	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DN407_RS00345	COG1098	S1 RNA binding domain
DN407_RS00360	COG2208	phosphoserine phosphatase activity
DN407_RS00370	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
DN407_RS00375	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DN407_RS00390	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DN407_RS00395	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DN407_RS00400	COG0512	Glutamine amidotransferase of anthranilate synthase
DN407_RS00405	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DN407_RS00410	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DN407_RS00415	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DN407_RS00420	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DN407_RS00425	COG1396	sequence-specific DNA binding
DN407_RS00430	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DN407_RS00520	COG3880	PFAM UvrB UvrC protein
DN407_RS00530	COG0542	response to heat
DN407_RS00535	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DN407_RS00545	COG4956	integral membrane protein (PIN domain superfamily)
DN407_RS00565	COG1045	serine acetyltransferase
DN407_RS00580	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DN407_RS00585	COG3688	RNA-binding protein containing a PIN domain
DN407_RS00600	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DN407_RS00605	COG0250	Participates in transcription elongation, termination and antitermination
DN407_RS00610	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DN407_RS00630	COG2813	Specifically methylates the guanine in position
DN407_RS00645	COG1358	cellular component organization or biogenesis
DN407_RS00650	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DN407_RS00720	COG0255	Belongs to the universal ribosomal protein uL29 family
DN407_RS00780	COG0201	protein transport
DN407_RS00790	COG0024	Methionine aminopeptidase
DN407_RS00800	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DN407_RS00835	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DN407_RS00860	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_RS00865	COG0489	protein tyrosine kinase activity
DN407_RS00875	COG2194	sulfuric ester hydrolase activity
DN407_RS00880	COG0726	polysaccharide deacetylase
DN407_RS00960	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DN407_RS00965	COG4856	YbbR-like protein
DN407_RS01000	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS01005	COG2011	ABC-type metal ion transport system permease component
DN407_RS01010	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DN407_RS01015	COG1464	Belongs to the NlpA lipoprotein family
DN407_RS01025	COG0604	alcohol dehydrogenase
DN407_RS01035	COG0277	FAD linked oxidase domain protein
DN407_RS01040	COG2271	Major facilitator Superfamily
DN407_RS01050	COG2814	Major facilitator Superfamily
DN407_RS01065	COG0601	transmembrane transport
DN407_RS01070	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DN407_RS01075	COG0444	Belongs to the ABC transporter superfamily
DN407_RS01080	COG4608	Belongs to the ABC transporter superfamily
DN407_RS01085	COG4166	transmembrane transport
DN407_RS01095	COG2207	Transcriptional regulator
DN407_RS01110	COG4166	transmembrane transport
DN407_RS01115	COG4166	transmembrane transport
DN407_RS01120	COG0656	L-ascorbic acid biosynthetic process
DN407_RS01135	COG4149	molybdate abc transporter
DN407_RS01140	COG0725	ABC transporter, periplasmic molybdate-binding protein
DN407_RS01145	COG1910	domain protein
DN407_RS01160	COG0697	spore germination
DN407_RS01175	COG0204	Acyl-transferase
DN407_RS01185	COG1609	Transcriptional regulator
DN407_RS01195	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS01215	COG5298	Protein conserved in bacteria
DN407_RS01235	COG0488	(ABC) transporter
DN407_RS01250	COG0747	negative chemotaxis
DN407_RS01255	COG0601	transmembrane transport
DN407_RS01260	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DN407_RS01265	COG0444	Belongs to the ABC transporter superfamily
DN407_RS01270	COG4608	Belongs to the ABC transporter superfamily
DN407_RS01275	COG0561	phosphatase activity
DN407_RS01300	COG3185	4-Hydroxyphenylpyruvate dioxygenase
DN407_RS01305	COG0179	Fumarylacetoacetate (FAA) hydrolase
DN407_RS01315	COG0531	amino acid
DN407_RS01320	COG2814	Major facilitator Superfamily
DN407_RS01330	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DN407_RS01340	COG4294	response to UV
DN407_RS01345	COG0705	Rhomboid family
DN407_RS01355	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
DN407_RS01360	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DN407_RS01365	COG0864	Transcriptional regulator
DN407_RS01370	COG2337	Toxic component of a toxin-antitoxin (TA) module
DN407_RS01375	COG2183	response to ionizing radiation
DN407_RS01475	COG0802	atpase or kinase
DN407_RS01480	COG1214	PFAM Peptidase M22, glycoprotease
DN407_RS01485	COG0456	acetyltransferase
DN407_RS01495	COG0488	(ABC) transporter
DN407_RS01510	COG1266	CAAX protease self-immunity
DN407_RS01530	COG2252	PERMEase
DN407_RS01540	COG5002	protein histidine kinase activity
DN407_RS01585	COG2205	protein histidine kinase activity
DN407_RS01590	COG0745	RESPONSE REGULATOR receiver
DN407_RS01630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_RS01640	COG0463	Glycosyl transferase, family 2
DN407_RS01640	COG1216	Glycosyl transferase, family 2
DN407_RS01660	COG0697	spore germination
DN407_RS01690	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DN407_RS01695	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DN407_RS01700	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DN407_RS01710	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DN407_RS01725	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DN407_RS01735	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DN407_RS01745	COG0151	Belongs to the GarS family
DN407_RS01775	COG0210	DNA helicase
DN407_RS01785	COG4851	CamS sex pheromone cAM373 precursor
DN407_RS01800	COG1335	isochorismatase
DN407_RS01815	COG2011	ABC-type metal ion transport system permease component
DN407_RS01835	COG0003	Pfam Anion-transporting ATPase
DN407_RS01840	COG1846	Transcriptional regulator
DN407_RS01845	COG4682	membrane
DN407_RS01865	COG1597	lipid kinase activity
DN407_RS01870	COG0546	phosphoglycolate phosphatase activity
DN407_RS01875	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DN407_RS01885	COG1012	belongs to the aldehyde dehydrogenase family
DN407_RS01890	COG2076	Multidrug Resistance protein
DN407_RS01900	COG2309	aminopeptidase activity
DN407_RS01915	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_RS01925	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DN407_RS01930	COG4807	Protein conserved in bacteria
DN407_RS01960	COG1757	Na H antiporter
DN407_RS01965	COG1473	amidohydrolase
DN407_RS01980	COG0450	alkyl hydroperoxide reductase
DN407_RS02000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_RS02005	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_RS02010	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_RS02020	COG0492	ferredoxin-NADP+ reductase activity
DN407_RS02035	COG0166	Belongs to the GPI family
DN407_RS02060	COG5002	protein histidine kinase activity
DN407_RS02080	COG3541	Predicted nucleotidyltransferase
DN407_RS02095	COG2814	Major facilitator Superfamily
DN407_RS02100	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DN407_RS02100	COG0723	plastoquinol--plastocyanin reductase activity
DN407_RS02110	COG0765	amino acid transport
DN407_RS02115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DN407_RS02125	COG0840	transmembrane signaling receptor activity
DN407_RS02150	COG0549	Belongs to the carbamate kinase family
DN407_RS02155	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DN407_RS02170	COG0366	Alpha amylase catalytic
DN407_RS02175	COG2190	(PTS) system
DN407_RS02175	COG1263	PTS System
DN407_RS02175	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DN407_RS02205	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DN407_RS02225	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DN407_RS02235	COG1116	anion transmembrane transporter activity
DN407_RS02290	COG2270	Major facilitator Superfamily
DN407_RS02320	COG2310	stress, protein
DN407_RS02325	COG2310	stress, protein
DN407_RS02330	COG2310	stress, protein
DN407_RS02335	COG0861	Integral membrane protein TerC family
DN407_RS02345	COG3853	Toxic anion resistance protein (TelA)
DN407_RS02360	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DN407_RS02370	COG1295	ribonuclease BN
DN407_RS02375	COG2217	Heavy metal translocating P-type atpase
DN407_RS02380	COG0697	spore germination
DN407_RS02400	COG0586	Pfam SNARE associated Golgi protein
DN407_RS02415	COG3871	stress protein (general stress protein 26)
DN407_RS02420	COG0387	Pfam Sodium calcium exchanger
DN407_RS02430	COG0535	radical SAM domain protein
DN407_RS02450	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DN407_RS02455	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DN407_RS02470	COG3829	transcription factor binding
DN407_RS02480	COG0833	amino acid
DN407_RS02485	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DN407_RS02515	COG1263	PTS System
DN407_RS02515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DN407_RS02520	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_RS02535	COG0463	Glycosyl transferase, family 2
DN407_RS02545	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_RS02545	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DN407_RS02565	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DN407_RS02585	COG1228	amidohydrolase
DN407_RS02590	COG1090	epimerase
DN407_RS02620	COG1988	membrane-bound metal-dependent
DN407_RS02625	COG1194	a g-specific adenine glycosylase
DN407_RS02650	COG1132	(ABC) transporter
DN407_RS02655	COG4129	membrane
DN407_RS02660	COG0067	glutamate synthase
DN407_RS02660	COG0070	glutamate synthase
DN407_RS02660	COG0069	glutamate synthase activity
DN407_RS02670	COG4555	ABC transporter
DN407_RS02690	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DN407_RS02695	COG0735	belongs to the Fur family
DN407_RS02815	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DN407_RS02840	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DN407_RS02845	COG5001	Diguanylate cyclase
DN407_RS02845	COG1716	ATPase activity
DN407_RS02850	COG2766	serine protein kinase
DN407_RS02870	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DN407_RS02880	COG1585	Membrane protein implicated in regulation of membrane protease activity
DN407_RS02885	COG2268	Band 7 protein
DN407_RS02895	COG3290	protein histidine kinase activity
DN407_RS02900	COG4565	transcriptional regulatory protein
DN407_RS02905	COG2851	Citrate transporter
DN407_RS02930	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DN407_RS02935	COG3842	ATPase activity
DN407_RS02940	COG1175	transmembrane transport
DN407_RS02945	COG0395	ABC-type sugar transport system, permease component
DN407_RS02955	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DN407_RS02960	COG0745	RESPONSE REGULATOR receiver
DN407_RS02965	COG3850	Histidine kinase
DN407_RS02965	COG5002	protein histidine kinase activity
DN407_RS02975	COG4990	cell redox homeostasis
DN407_RS02985	COG3290	protein histidine kinase activity
DN407_RS02990	COG4565	transcriptional regulatory protein
DN407_RS02995	COG3493	citrate carrier protein
DN407_RS03000	COG0281	malic enzyme
DN407_RS03010	COG0697	spore germination
DN407_RS03015	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_RS03025	COG5002	protein histidine kinase activity
DN407_RS03030	COG0745	RESPONSE REGULATOR receiver
DN407_RS03035	COG0454	-acetyltransferase
DN407_RS03035	COG0456	acetyltransferase
DN407_RS03040	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DN407_RS03045	COG3383	formate dehydrogenase (NAD+) activity
DN407_RS03050	COG2427	Protein of unknown function (DUF1641)
DN407_RS03065	COG0531	amino acid
DN407_RS03075	COG0640	Transcriptional regulator
DN407_RS03080	COG2217	Heavy metal translocating P-type atpase
DN407_RS03085	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DN407_RS03100	COG3227	Zinc metalloprotease (Elastase)
DN407_RS03120	COG2720	vancomycin resistance protein
DN407_RS03125	COG1316	TRANSCRIPTIONal
DN407_RS03130	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_RS03135	COG0346	lactoylglutathione lyase activity
DN407_RS03140	COG1253	flavin adenine dinucleotide binding
DN407_RS03145	COG1027	Aspartate ammonia-lyase
DN407_RS03150	COG1620	l-lactate permease
DN407_RS03165	COG3104	oligopeptide transport
DN407_RS03170	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_RS03175	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_RS03180	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_RS03190	COG2226	methyltransferase
DN407_RS03200	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_RS03210	COG4548	von Willebrand factor, type A
DN407_RS03215	COG0714	Associated with various cellular activities
DN407_RS03235	COG0531	amino acid
DN407_RS03240	COG2188	Transcriptional regulator
DN407_RS03245	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DN407_RS03245	COG1263	PTS System
DN407_RS03250	COG0366	Alpha amylase catalytic
DN407_RS03265	COG0697	spore germination
DN407_RS03270	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DN407_RS03275	COG1115	amino acid carrier protein
DN407_RS03285	COG1126	abc transporter atp-binding protein
DN407_RS03290	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DN407_RS03295	COG0765	amino acid transport
DN407_RS03300	COG0765	amino acid transport
DN407_RS03305	COG0833	amino acid
DN407_RS03320	COG1595	DNA-templated transcription, initiation
DN407_RS03330	COG2378	regulation of single-species biofilm formation
DN407_RS03335	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DN407_RS03340	COG5002	protein histidine kinase activity
DN407_RS03370	COG2271	Major facilitator Superfamily
DN407_RS03375	COG1846	Transcriptional regulator
DN407_RS03380	COG0477	Major facilitator Superfamily
DN407_RS03385	COG1609	Transcriptional regulator
DN407_RS03390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DN407_RS03405	COG1172	Belongs to the binding-protein-dependent transport system permease family
DN407_RS03410	COG1879	ABC-type sugar transport system periplasmic component
DN407_RS03440	COG1063	alcohol dehydrogenase
DN407_RS03490	COG0840	transmembrane signaling receptor activity
DN407_RS03495	COG3584	3D domain protein
DN407_RS03495	COG1388	LysM domain
DN407_RS03500	COG1476	TRANSCRIPTIONal
DN407_RS03520	COG3104	oligopeptide transport
DN407_RS03525	COG1114	Component of the transport system for branched-chain amino acids
DN407_RS03540	COG1113	amino acid transport
DN407_RS03545	COG2252	PERMEase
DN407_RS03560	COG2153	protein acetylation
DN407_RS03570	COG0569	domain protein
DN407_RS03570	COG0475	glutathione-regulated potassium exporter activity
DN407_RS03580	COG1845	cytochrome c oxidase, subunit III
DN407_RS03585	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DN407_RS03590	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DN407_RS03595	COG0833	amino acid
DN407_RS03600	COG4990	cell redox homeostasis
DN407_RS03615	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DN407_RS03620	COG0697	spore germination
DN407_RS03625	COG0531	amino acid
DN407_RS03635	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DN407_RS03640	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DN407_RS03645	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DN407_RS03645	COG1918	ferrous iron import across plasma membrane
DN407_RS03650	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DN407_RS03655	COG0573	inorganic phosphate transmembrane transporter activity
DN407_RS03660	COG0581	inorganic phosphate transmembrane transporter activity
DN407_RS03665	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DN407_RS03785	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
DN407_RS03805	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DN407_RS03810	COG1116	anion transmembrane transporter activity
DN407_RS03815	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DN407_RS03820	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DN407_RS03825	COG0352	thiamine-phosphate diphosphorylase activity
DN407_RS03830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DN407_RS03835	COG2104	thiamine diphosphate biosynthetic process
DN407_RS03845	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DN407_RS03850	COG0351	phosphomethylpyrimidine kinase
DN407_RS03890	COG2205	protein histidine kinase activity
DN407_RS03895	COG2814	Major facilitator Superfamily
DN407_RS03900	COG1846	Transcriptional regulator
DN407_RS03925	COG1136	(ABC) transporter
DN407_RS03935	COG2252	PERMEase
DN407_RS03940	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS04000	COG0778	Nitroreductase
DN407_RS04005	COG2719	SpoVR family
DN407_RS04015	COG3591	Belongs to the peptidase S1B family
DN407_RS04025	COG0446	pyridine nucleotide-disulphide oxidoreductase
DN407_RS04030	COG1937	Protein conserved in bacteria
DN407_RS04035	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_RS04035	COG0425	Belongs to the sulfur carrier protein TusA family
DN407_RS04040	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS04040	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_RS04045	COG0425	Belongs to the sulfur carrier protein TusA family
DN407_RS04050	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_RS04050	COG0425	Belongs to the sulfur carrier protein TusA family
DN407_RS04060	COG2210	Belongs to the sulfur carrier protein TusA family
DN407_RS04065	COG0730	response to heat
DN407_RS04075	COG1316	TRANSCRIPTIONal
DN407_RS04080	COG0604	alcohol dehydrogenase
DN407_RS04085	COG1283	sodium-dependent phosphate transmembrane transporter activity
DN407_RS04105	COG3711	transcriptional antiterminator
DN407_RS04105	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DN407_RS04110	COG1447	Phosphotransferase system cellobiose-specific component IIA
DN407_RS04115	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DN407_RS04140	COG3584	3D domain protein
DN407_RS04140	COG1388	LysM domain
DN407_RS04145	COG0577	efflux transmembrane transporter activity
DN407_RS04150	COG1136	(ABC) transporter
DN407_RS04160	COG5522	Integral membrane protein (intg_mem_TP0381)
DN407_RS04175	COG1114	Component of the transport system for branched-chain amino acids
DN407_RS04180	COG3546	catalase activity
DN407_RS04215	COG0586	Pfam SNARE associated Golgi protein
DN407_RS04245	COG0531	amino acid
DN407_RS04250	COG0475	glutathione-regulated potassium exporter activity
DN407_RS04260	COG1737	Transcriptional regulator
DN407_RS04270	COG1263	PTS System
DN407_RS04270	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DN407_RS04280	COG2259	Doxx family
DN407_RS04300	COG1522	sequence-specific DNA binding
DN407_RS04305	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DN407_RS04305	COG0165	Argininosuccinate lyase
DN407_RS04310	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS04330	COG1309	transcriptional regulator
DN407_RS04335	COG2814	Major facilitator Superfamily
DN407_RS04340	COG1733	regulation of RNA biosynthetic process
DN407_RS04355	COG4533	DNA binding
DN407_RS04360	COG2211	Major facilitator Superfamily
DN407_RS04370	COG0693	protein deglycase activity
DN407_RS04375	COG0693	protein deglycase activity
DN407_RS04375	COG0753	catalase activity
DN407_RS04385	COG0531	amino acid
DN407_RS04390	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DN407_RS04400	COG1012	belongs to the aldehyde dehydrogenase family
DN407_RS04415	COG1132	(ABC) transporter
DN407_RS04420	COG1132	(ABC) transporter
DN407_RS04430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DN407_RS04435	COG0765	amino acid transport
DN407_RS04440	COG1126	abc transporter atp-binding protein
DN407_RS04455	COG0189	ligase activity
DN407_RS04485	COG0028	Belongs to the TPP enzyme family
DN407_RS04490	COG3527	Alpha-acetolactate decarboxylase
DN407_RS04505	COG0561	phosphatase activity
DN407_RS04515	COG3409	Peptidoglycan-binding domain 1 protein
DN407_RS04515	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_RS04520	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DN407_RS04525	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_RS04540	COG0659	secondary active sulfate transmembrane transporter activity
DN407_RS04545	COG2244	polysaccharide biosynthetic process
DN407_RS04570	COG1024	Enoyl-CoA hydratase
DN407_RS04590	COG1363	Peptidase, m42
DN407_RS04630	COG0601	transmembrane transport
DN407_RS04635	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DN407_RS04640	COG0444	Belongs to the ABC transporter superfamily
DN407_RS04645	COG4608	Belongs to the ABC transporter superfamily
DN407_RS04670	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS04695	COG0477	Major facilitator Superfamily
DN407_RS04700	COG3290	protein histidine kinase activity
DN407_RS04705	COG4565	transcriptional regulatory protein
DN407_RS04710	COG3181	Tripartite tricarboxylate transporter family receptor
DN407_RS04735	COG0433	COG0433 Predicted ATPase
DN407_RS04745	COG0419	ATPase involved in DNA repair
DN407_RS04755	COG1104	cysteine desulfurase activity
DN407_RS04790	COG0789	Transcriptional regulator
DN407_RS04790	COG4978	Transcriptional regulator
DN407_RS04805	COG0305	Participates in initiation and elongation during chromosome replication
DN407_RS04830	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DN407_RS04835	COG1288	antiporter activity
DN407_RS04845	COG0477	Major facilitator Superfamily
DN407_RS04860	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS04925	COG1183	phosphatidylcholine synthase activity
DN407_RS04945	COG2376	Dihydroxyacetone kinase
DN407_RS04960	COG2376	Dihydroxyacetone kinase
DN407_RS04995	COG2373	Large extracellular alpha-helical protein
DN407_RS05070	COG1191	sigma factor activity
DN407_RS05080	COG2208	phosphoserine phosphatase activity
DN407_RS05085	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DN407_RS05090	COG0784	Response regulator, receiver
DN407_RS05090	COG2205	protein histidine kinase activity
DN407_RS05090	COG5002	protein histidine kinase activity
DN407_RS05130	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
DN407_RS05150	COG0420	3'-5' exonuclease activity
DN407_RS05155	COG4717	serine-type aminopeptidase activity
DN407_RS05165	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_RS05185	COG0346	lactoylglutathione lyase activity
DN407_RS05190	COG0346	lactoylglutathione lyase activity
DN407_RS05195	COG0457	Tetratricopeptide repeat
DN407_RS05205	COG2267	carboxylic ester hydrolase activity
DN407_RS05225	COG2140	Oxalate decarboxylase
DN407_RS05230	COG3620	sequence-specific DNA binding
DN407_RS05235	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DN407_RS05240	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DN407_RS05250	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DN407_RS05255	COG1695	Transcriptional regulator
DN407_RS05275	COG0772	Belongs to the SEDS family
DN407_RS05280	COG3973	AAA domain
DN407_RS05310	COG4980	gas vesicle protein
DN407_RS05315	COG0537	adenosine 5'-monophosphoramidase activity
DN407_RS05320	COG1131	(ABC) transporter
DN407_RS05325	COG4473	ABC transporter
DN407_RS05340	COG1309	transcriptional regulator
DN407_RS05345	COG3402	PFAM membrane-flanked domain
DN407_RS05350	COG3428	Bacterial PH domain
DN407_RS05385	COG0697	spore germination
DN407_RS05390	COG3402	PFAM membrane-flanked domain
DN407_RS05395	COG3428	Bacterial PH domain
DN407_RS05400	COG2329	Antibiotic biosynthesis monooxygenase
DN407_RS05405	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DN407_RS05420	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
DN407_RS05455	COG1309	transcriptional regulator
DN407_RS05460	COG1511	domain protein
DN407_RS05460	COG1511	domain protein
DN407_RS05485	COG1609	Transcriptional regulator
DN407_RS05495	COG1234	tRNA 3'-trailer cleavage
DN407_RS05500	COG0095	Lipoate-protein ligase
DN407_RS05510	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_RS05520	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DN407_RS05530	COG4208	sulfate ABC transporter
DN407_RS05550	COG1408	metallophosphoesterase
DN407_RS05555	COG1078	dGTPase activity
DN407_RS05565	COG1595	DNA-templated transcription, initiation
DN407_RS05575	COG2207	Transcriptional regulator
DN407_RS05575	COG3708	Transcriptional regulator
DN407_RS05585	COG2205	protein histidine kinase activity
DN407_RS05590	COG0745	RESPONSE REGULATOR receiver
DN407_RS05610	COG0501	Belongs to the peptidase M48B family
DN407_RS05615	COG0840	transmembrane signaling receptor activity
DN407_RS05620	COG3693	PFAM glycoside hydrolase, family 10
DN407_RS05630	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DN407_RS05635	COG2224	Isocitrate lyase
DN407_RS05650	COG1278	Cold shock
DN407_RS05670	COG0398	Pfam SNARE associated Golgi protein
DN407_RS05730	COG0179	Fumarylacetoacetate (FAA) hydrolase
DN407_RS05755	COG0367	asparagine synthase
DN407_RS05765	COG0753	catalase activity
DN407_RS05775	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DN407_RS05800	COG3339	Conserved Protein
DN407_RS05805	COG0004	ammonium transporteR
DN407_RS05825	COG2996	Protein conserved in bacteria
DN407_RS05840	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS05855	COG0561	phosphatase activity
DN407_RS05875	COG2267	carboxylic ester hydrolase activity
DN407_RS05890	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DN407_RS05895	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DN407_RS05900	COG5504	Zn-dependent protease
DN407_RS05910	COG0180	Tryptophanyl-tRNA synthetase
DN407_RS05920	COG4166	transmembrane transport
DN407_RS05925	COG0601	transmembrane transport
DN407_RS05930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DN407_RS05935	COG0444	Belongs to the ABC transporter superfamily
DN407_RS05940	COG4608	Belongs to the ABC transporter superfamily
DN407_RS05945	COG0534	Mate efflux family protein
DN407_RS05950	COG4166	transmembrane transport
DN407_RS05965	COG0861	Integral membrane protein TerC family
DN407_RS05975	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DN407_RS05985	COG1164	Oligoendopeptidase f
DN407_RS05995	COG2346	COG2346, Truncated hemoglobins
DN407_RS06000	COG4116	CYTH
DN407_RS06010	COG2357	RelA SpoT domain protein
DN407_RS06020	COG0564	pseudouridine synthase activity
DN407_RS06035	COG0772	Belongs to the SEDS family
DN407_RS06040	COG1216	Glycosyl transferase, family 2
DN407_RS06060	COG0463	Glycosyl transferase, family 2
DN407_RS06060	COG0457	Tetratricopeptide repeat
DN407_RS06080	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DN407_RS06095	COG1091	dTDP-4-dehydrorhamnose reductase activity
DN407_RS06140	COG2153	protein acetylation
DN407_RS06150	COG2382	esterase
DN407_RS06175	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DN407_RS06185	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DN407_RS06185	COG0512	Glutamine amidotransferase of anthranilate synthase
DN407_RS06220	COG1620	l-lactate permease
DN407_RS06225	COG5634	Uncharacterized conserved protein (DUF2278)
DN407_RS06280	COG0508	dehydrogenase complex catalyzes the overall conversion of
DN407_RS06330	COG1686	Belongs to the peptidase S11 family
DN407_RS06335	COG0681	Belongs to the peptidase S26 family
DN407_RS06370	COG1012	belongs to the aldehyde dehydrogenase family
DN407_RS06380	COG1176	ABC-type spermidine putrescine transport system, permease component I
DN407_RS06385	COG1177	transmembrane transport
DN407_RS06400	COG2409	Drug exporters of the RND superfamily
DN407_RS06410	COG0564	pseudouridine synthase activity
DN407_RS06420	COG2340	Cysteine-rich secretory protein family
DN407_RS06425	COG0247	lactate metabolic process
DN407_RS06430	COG0277	FAD linked oxidase domain protein
DN407_RS06435	COG3835	regulator
DN407_RS06445	COG0745	RESPONSE REGULATOR receiver
DN407_RS06450	COG5002	protein histidine kinase activity
DN407_RS06455	COG2186	Transcriptional regulator
DN407_RS06475	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DN407_RS06485	COG2116	formate transmembrane transporter activity
DN407_RS06490	COG0861	Integral membrane protein TerC family
DN407_RS06495	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DN407_RS06505	COG2030	dehydratase
DN407_RS06525	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS06530	COG3243	poly(R)-hydroxyalkanoic acid synthase
DN407_RS06540	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DN407_RS06555	COG1840	ABC-type Fe3 transport system, periplasmic component
DN407_RS06560	COG3842	ATPase activity
DN407_RS06585	COG1349	DNA-binding transcription factor activity
DN407_RS06595	COG0235	Class ii aldolase
DN407_RS06605	COG2861	carbohydrate metabolic process
DN407_RS06615	COG3852	Histidine kinase
DN407_RS06620	COG1846	Transcriptional regulator
DN407_RS06630	COG2318	DinB family
DN407_RS06635	COG5002	protein histidine kinase activity
DN407_RS06645	COG0720	synthase
DN407_RS06660	COG4873	Protein conserved in bacteria
DN407_RS06690	COG1780	Probably involved in ribonucleotide reductase function
DN407_RS06695	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DN407_RS06700	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DN407_RS06705	COG1725	Transcriptional regulator
DN407_RS06710	COG1131	(ABC) transporter
DN407_RS06720	COG1131	(ABC) transporter
DN407_RS06740	COG1522	sequence-specific DNA binding
DN407_RS06750	COG1335	isochorismatase
DN407_RS06760	COG1619	proteins homologs of microcin C7 resistance protein MccF
DN407_RS06765	COG2070	2-Nitropropane dioxygenase
DN407_RS06770	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DN407_RS06780	COG1696	Membrane protein involved in D-alanine export
DN407_RS06805	COG0716	FMN binding
DN407_RS06845	COG1846	Transcriptional regulator
DN407_RS06855	COG1301	dicarboxylic acid transport
DN407_RS06860	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DN407_RS06865	COG4709	membrane
DN407_RS06870	COG3874	Sporulation protein YtfJ
DN407_RS06890	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DN407_RS06895	COG0028	Belongs to the TPP enzyme family
DN407_RS06900	COG0440	acetolactate synthase activity
DN407_RS06975	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DN407_RS06990	COG1183	phosphatidylcholine synthase activity
DN407_RS06995	COG1368	sulfuric ester hydrolase activity
DN407_RS07005	COG0019	diaminopimelate decarboxylase activity
DN407_RS07025	COG0529	Catalyzes the synthesis of activated sulfate
DN407_RS07030	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DN407_RS07050	COG1648	precorrin-2 dehydrogenase activity
DN407_RS07055	COG0733	neurotransmitter:sodium symporter activity
DN407_RS07075	COG1757	Na H antiporter
DN407_RS07090	COG4758	membrane
DN407_RS07095	COG4585	Histidine kinase
DN407_RS07100	COG2197	response regulator
DN407_RS07110	COG1114	Component of the transport system for branched-chain amino acids
DN407_RS07160	COG0730	response to heat
DN407_RS07165	COG0306	phosphate transporter
DN407_RS07170	COG1392	Phosphate transport regulator
DN407_RS07175	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DN407_RS07190	COG3852	Histidine kinase
DN407_RS07195	COG1801	Protein of unknown function DUF72
DN407_RS07205	COG0582	viral genome integration into host DNA
DN407_RS07210	COG5002	protein histidine kinase activity
DN407_RS07230	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DN407_RS07230	COG0392	lysyltransferase activity
DN407_RS07245	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DN407_RS07250	COG1686	Belongs to the peptidase S11 family
DN407_RS07255	COG2715	membrane protein required for spore maturation
DN407_RS07260	COG0700	Nucleoside recognition
DN407_RS07265	COG1187	pseudouridine synthase activity
DN407_RS07275	COG1333	cytochrome c biogenesis protein
DN407_RS07280	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DN407_RS07285	COG0745	RESPONSE REGULATOR receiver
DN407_RS07290	COG5002	protein histidine kinase activity
DN407_RS07295	COG2096	Adenosyltransferase
DN407_RS07310	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DN407_RS07315	COG1141	Ferredoxin
DN407_RS07325	COG0514	ATP-dependent DNA helicase (RecQ)
DN407_RS07330	COG1266	CAAX protease self-immunity
DN407_RS07340	COG1408	metallophosphoesterase
DN407_RS07345	COG0789	Transcriptional regulator
DN407_RS07355	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DN407_RS07375	COG0492	ferredoxin-NADP+ reductase activity
DN407_RS07380	COG0252	asparaginase activity
DN407_RS07445	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DN407_RS07460	COG0142	geranyltranstransferase activity
DN407_RS07470	COG0142	geranyltranstransferase activity
DN407_RS07495	COG0457	Tetratricopeptide repeat
DN407_RS07515	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DN407_RS07520	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DN407_RS07520	COG2010	Cytochrome c
DN407_RS07525	COG4347	Protein of unknown function (DUF1405)
DN407_RS07540	COG2738	Putative neutral zinc metallopeptidase
DN407_RS07550	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS07560	COG1694	Mazg nucleotide pyrophosphohydrolase
DN407_RS07580	COG0438	transferase activity, transferring glycosyl groups
DN407_RS07620	COG1199	ATP-dependent helicase activity
DN407_RS07620	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DN407_RS07640	COG3935	DnaD domain protein
DN407_RS07645	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DN407_RS07655	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DN407_RS07655	COG4499	WXG100 protein secretion system (Wss), protein YukC
DN407_RS07710	COG0116	Belongs to the methyltransferase superfamily
DN407_RS07720	COG1199	ATP-dependent helicase activity
DN407_RS07725	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DN407_RS07735	COG0024	Methionine aminopeptidase
DN407_RS07750	COG2233	PERMEase
DN407_RS07755	COG2311	Membrane
DN407_RS07760	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DN407_RS07770	COG0456	acetyltransferase
DN407_RS07825	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DN407_RS07840	COG3944	biosynthesis protein
DN407_RS07850	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DN407_RS07865	COG1215	transferase activity, transferring glycosyl groups
DN407_RS07870	COG0438	transferase activity, transferring glycosyl groups
DN407_RS07885	COG0454	-acetyltransferase
DN407_RS07905	COG0328	RNA-DNA hybrid ribonuclease activity
DN407_RS07940	COG3403	YqcI/YcgG family
DN407_RS07945	COG1280	lysine exporter protein (LysE YggA)
DN407_RS07965	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DN407_RS07970	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DN407_RS07980	COG0475	glutathione-regulated potassium exporter activity
DN407_RS07985	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DN407_RS07990	COG4978	Transcriptional regulator
DN407_RS07990	COG0789	Transcriptional regulator
DN407_RS08000	COG2323	membrane
DN407_RS08005	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DN407_RS08045	COG1923	regulation of RNA biosynthetic process
DN407_RS08055	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DN407_RS08060	COG1360	Flagellar Motor Protein
DN407_RS08065	COG2201	protein-glutamate methylesterase activity
DN407_RS08070	COG2198	Histidine kinase
DN407_RS08070	COG0643	Histidine kinase
DN407_RS08075	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DN407_RS08075	COG1776	CheC inhibitor of MCP methylation
DN407_RS08090	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DN407_RS08110	COG1256	bacterial-type flagellum assembly
DN407_RS08115	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DN407_RS08135	COG1815	bacterial-type flagellum-dependent cell motility
DN407_RS08140	COG1558	bacterial-type flagellum-dependent cell motility
DN407_RS08150	COG1766	The M ring may be actively involved in energy transduction
DN407_RS08155	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DN407_RS08165	COG1157	protein secretion by the type III secretion system
DN407_RS08200	COG0784	Response regulator, receiver
DN407_RS08200	COG0835	chemotaxis
DN407_RS08215	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DN407_RS08220	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DN407_RS08225	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DN407_RS08230	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DN407_RS08235	COG0741	lytic transglycosylase activity
DN407_RS08245	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DN407_RS08250	COG1776	CheC inhibitor of MCP methylation
DN407_RS08250	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DN407_RS08260	COG1338	Plays a role in the flagellum-specific transport system
DN407_RS08265	COG1987	bacterial-type flagellum assembly
DN407_RS08275	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DN407_RS08280	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DN407_RS08285	COG1419	protein localization to endoplasmic reticulum
DN407_RS08290	COG4786	Flagellar basal body rod
DN407_RS08295	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DN407_RS08330	COG2329	Antibiotic biosynthesis monooxygenase
DN407_RS08355	COG0583	DNA-binding transcription factor activity
DN407_RS08360	COG3842	ATPase activity
DN407_RS08365	COG0725	ABC transporter, periplasmic molybdate-binding protein
DN407_RS08435	COG0367	asparagine synthase
DN407_RS08465	COG1802	Transcriptional regulator
DN407_RS08470	COG0697	spore germination
DN407_RS08480	COG0523	cobalamin synthesis protein
DN407_RS08490	COG0701	Predicted permease
DN407_RS08505	COG1757	Na H antiporter
DN407_RS08510	COG0789	Transcriptional regulator
DN407_RS08535	COG0534	Mate efflux family protein
DN407_RS08540	COG3340	Belongs to the peptidase S51 family
DN407_RS08560	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DN407_RS08570	COG0457	Tetratricopeptide repeat
DN407_RS08590	COG2733	membrane
DN407_RS08630	COG1131	(ABC) transporter
DN407_RS08650	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DN407_RS08655	COG0528	UMP kinase activity
DN407_RS08665	COG1027	Aspartate ammonia-lyase
DN407_RS08670	COG0281	malic enzyme
DN407_RS08675	COG4191	Histidine kinase
DN407_RS08680	COG0784	Response regulator, receiver
DN407_RS08685	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DN407_RS08735	COG2814	Major facilitator Superfamily
DN407_RS08755	COG1695	Transcriptional regulator
DN407_RS08765	COG0477	Major facilitator Superfamily
DN407_RS08775	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DN407_RS08780	COG2223	nitrite transmembrane transporter activity
DN407_RS08785	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DN407_RS08805	COG0733	neurotransmitter:sodium symporter activity
DN407_RS08810	COG5566	PFAM Mor transcription activator
DN407_RS08815	COG2323	membrane
DN407_RS08835	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DN407_RS08845	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DN407_RS08850	COG0028	Belongs to the TPP enzyme family
DN407_RS08870	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DN407_RS08895	COG2814	Major facilitator Superfamily
DN407_RS08900	COG3384	dioxygenase
DN407_RS08910	COG3279	Response regulator of the LytR AlgR family
DN407_RS08915	COG0427	acetyl-CoA hydrolase
DN407_RS08935	COG4166	transmembrane transport
DN407_RS08940	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS08945	COG1914	H( )-stimulated, divalent metal cation uptake system
DN407_RS08960	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DN407_RS08965	COG0531	amino acid
DN407_RS09000	COG1309	transcriptional regulator
DN407_RS09005	COG2390	Transcriptional regulator
DN407_RS09015	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_RS09020	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
DN407_RS09035	COG4846	Membrane protein involved in cytochrome C biogenesis
DN407_RS09060	COG0006	proline dipeptidase activity
DN407_RS09070	COG2132	Multicopper oxidase
DN407_RS09085	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DN407_RS09105	COG1114	Component of the transport system for branched-chain amino acids
DN407_RS09120	COG1276	copper resistance
DN407_RS09120	COG2372	response to copper ion
DN407_RS09125	COG4549	nuclear export factor GLE1
DN407_RS09130	COG0697	spore germination
DN407_RS09135	COG0583	DNA-binding transcription factor activity
DN407_RS09140	COG1959	2 iron, 2 sulfur cluster binding
DN407_RS09145	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DN407_RS09150	COG0778	Nitroreductase
DN407_RS09160	COG0628	permease
DN407_RS09170	COG1231	oxidoreductase activity
DN407_RS09180	COG0523	cobalamin synthesis protein
DN407_RS09190	COG0411	ABC transporter
DN407_RS09210	COG0583	DNA-binding transcription factor activity
DN407_RS09220	COG1942	4-Oxalocrotonate Tautomerase
DN407_RS09235	COG1271	oxidase subunit
DN407_RS09240	COG1294	oxidase, subunit
DN407_RS09245	COG4988	ABC transporter
DN407_RS09250	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DN407_RS09260	COG1216	Glycosyl transferase, family 2
DN407_RS09300	COG1686	Belongs to the peptidase S11 family
DN407_RS09315	COG0791	NLP P60 protein
DN407_RS09315	COG1388	LysM domain
DN407_RS09325	COG1132	(ABC) transporter
DN407_RS09330	COG0745	RESPONSE REGULATOR receiver
DN407_RS09335	COG5002	protein histidine kinase activity
DN407_RS09340	COG0300	oxidoreductase activity
DN407_RS09370	COG0460	homoserine dehydrogenase
DN407_RS09395	COG1316	TRANSCRIPTIONal
DN407_RS09405	COG0745	RESPONSE REGULATOR receiver
DN407_RS09410	COG5002	protein histidine kinase activity
DN407_RS09425	COG1285	pathogenesis
DN407_RS09430	COG1247	-acetyltransferase
DN407_RS09450	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DN407_RS09460	COG1082	Xylose isomerase domain protein TIM barrel
DN407_RS09470	COG2814	Major facilitator Superfamily
DN407_RS09475	COG1279	arginine transmembrane transporter activity
DN407_RS09480	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_RS09490	COG1752	Esterase of the alpha-beta hydrolase superfamily
DN407_RS09525	COG0577	efflux transmembrane transporter activity
DN407_RS09530	COG2002	toxin-antitoxin pair type II binding
DN407_RS09535	COG1404	Belongs to the peptidase S8 family
DN407_RS09570	COG0840	transmembrane signaling receptor activity
DN407_RS09585	COG3949	Membrane
DN407_RS09590	COG0783	Belongs to the Dps family
DN407_RS09605	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DN407_RS09615	COG1231	oxidoreductase activity
DN407_RS09620	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS09625	COG4989	oxidoreductase activity
DN407_RS09630	COG0523	cobalamin synthesis protein
DN407_RS09635	COG0456	acetyltransferase
DN407_RS09640	COG0803	Belongs to the bacterial solute-binding protein 9 family
DN407_RS09645	COG0702	epimerase
DN407_RS09655	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DN407_RS09665	COG4166	transmembrane transport
DN407_RS09690	COG5337	Spore coat protein CotH
DN407_RS09695	COG1051	belongs to the nudix hydrolase family
DN407_RS09700	COG0586	Pfam SNARE associated Golgi protein
DN407_RS09705	COG2244	polysaccharide biosynthetic process
DN407_RS09715	COG0701	Predicted permease
DN407_RS09720	COG3689	TIGRFAM TIGR03943 family protein
DN407_RS09725	COG1607	acyl-coa hydrolase
DN407_RS09735	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DN407_RS09750	COG0702	epimerase
DN407_RS09755	COG2839	Protein conserved in bacteria
DN407_RS09760	COG1253	flavin adenine dinucleotide binding
DN407_RS09775	COG1114	Component of the transport system for branched-chain amino acids
DN407_RS09780	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DN407_RS09800	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_RS09810	COG1876	peptidase activity
DN407_RS09825	COG2211	Major facilitator Superfamily
DN407_RS09840	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_RS09850	COG0561	phosphatase activity
DN407_RS09865	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DN407_RS09885	COG1819	glycosyl
DN407_RS09890	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS09895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_RS09925	COG0456	acetyltransferase
DN407_RS09960	COG4499	WXG100 protein secretion system (Wss), protein YukC
DN407_RS10035	COG3874	Sporulation protein YtfJ
DN407_RS10060	COG2226	methyltransferase
DN407_RS10080	COG1082	Xylose isomerase domain protein TIM barrel
DN407_RS10085	COG0346	lactoylglutathione lyase activity
DN407_RS10095	COG0604	alcohol dehydrogenase
DN407_RS10100	COG1595	DNA-templated transcription, initiation
DN407_RS10125	COG0386	Belongs to the glutathione peroxidase family
DN407_RS10130	COG1305	Transglutaminase-like
DN407_RS10135	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
DN407_RS10140	COG0714	Associated with various cellular activities
DN407_RS10145	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DN407_RS10150	COG1140	nitrate reductase beta subunit
DN407_RS10155	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DN407_RS10160	COG2181	nitrate reductase activity
DN407_RS10165	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DN407_RS10170	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DN407_RS10175	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DN407_RS10180	COG0303	'Molybdopterin
DN407_RS10185	COG0314	molybdopterin synthase activity
DN407_RS10190	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DN407_RS10195	COG2223	nitrite transmembrane transporter activity
DN407_RS10220	COG1648	precorrin-2 dehydrogenase activity
DN407_RS10230	COG1587	Uroporphyrinogen-III synthase
DN407_RS10230	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DN407_RS10235	COG2146	nitrite reductase [NAD(P)H] activity
DN407_RS10240	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DN407_RS10245	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
DN407_RS10280	COG2359	stage V sporulation protein S
DN407_RS10300	COG0457	Tetratricopeptide repeat
DN407_RS10315	COG1418	mRNA catabolic process
DN407_RS10320	COG0488	(ABC) transporter
DN407_RS10335	COG0629	single-stranded DNA binding
DN407_RS10345	COG1413	lyase activity
DN407_RS10360	COG2136	Putative SAM-dependent methyltransferase
DN407_RS10360	COG2521	methyltransferase
DN407_RS10365	COG0018	arginyl-trna synthetase
DN407_RS10415	COG0017	Asparaginyl-tRNA synthetase
DN407_RS10420	COG0733	neurotransmitter:sodium symporter activity
DN407_RS10445	COG2610	gluconate transmembrane transporter activity
DN407_RS10455	COG1794	racemase activity, acting on amino acids and derivatives
DN407_RS10465	COG0456	acetyltransferase
DN407_RS10475	COG3655	Transcriptional regulator
DN407_RS10480	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DN407_RS10490	COG1131	(ABC) transporter
DN407_RS10495	COG4473	ABC transporter
DN407_RS10505	COG0546	phosphoglycolate phosphatase activity
DN407_RS10520	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_RS10535	COG0768	penicillin binding
DN407_RS10545	COG0204	Acyl-transferase
DN407_RS10550	COG1272	protein, Hemolysin III
DN407_RS10560	COG0805	protein transport
DN407_RS10570	COG1307	EDD domain protein, DegV family
DN407_RS10580	COG1999	signal sequence binding
DN407_RS10585	COG0071	Belongs to the small heat shock protein (HSP20) family
DN407_RS10590	COG0367	asparagine synthase
DN407_RS10605	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_RS10610	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_RS10615	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DN407_RS10635	COG1335	isochorismatase
DN407_RS10650	COG0668	transmembrane transport
DN407_RS10655	COG4585	Histidine kinase
DN407_RS10655	COG2203	Gaf domain
DN407_RS10660	COG2197	response regulator
DN407_RS10665	COG1737	Transcriptional regulator
DN407_RS10670	COG0384	phenazine biosynthesis protein PhzF
DN407_RS10675	COG1064	alcohol dehydrogenase
DN407_RS10700	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DN407_RS10735	COG0517	IMP dehydrogenase activity
DN407_RS10735	COG1125	glycine betaine transport
DN407_RS10740	COG1174	glycine betaine transport
DN407_RS10775	COG1253	flavin adenine dinucleotide binding
DN407_RS10780	COG1012	belongs to the aldehyde dehydrogenase family
DN407_RS10785	COG5506	Protein of unknown function (DUF1694)
DN407_RS10800	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DN407_RS10805	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DN407_RS10810	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DN407_RS10815	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DN407_RS10820	COG0456	acetyltransferase
DN407_RS10825	COG3829	transcription factor binding
DN407_RS10830	COG1509	lysine 2,3-aminomutase activity
DN407_RS10865	COG0515	serine threonine protein kinase
DN407_RS10865	COG3064	Membrane
DN407_RS10865	COG4991	sh3 domain protein
DN407_RS10875	COG0671	phosphoesterase, PA-phosphatase related
DN407_RS10880	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DN407_RS10885	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DN407_RS10955	COG0300	oxidoreductase activity
DN407_RS10975	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DN407_RS10975	COG4499	WXG100 protein secretion system (Wss), protein YukC
DN407_RS10985	COG2814	Major facilitator Superfamily
DN407_RS10990	COG4841	protein insertion into membrane
DN407_RS10995	COG0372	Belongs to the citrate synthase family
DN407_RS11000	COG2079	MmgE PrpD family protein
DN407_RS11005	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
DN407_RS11010	COG1960	acyl-CoA dehydrogenase activity
DN407_RS11015	COG2084	Dehydrogenase
DN407_RS11025	COG1280	lysine exporter protein (LysE YggA)
DN407_RS11030	COG1024	Enoyl-CoA hydratase
DN407_RS11045	COG0420	3'-5' exonuclease activity
DN407_RS11050	COG0419	ATPase involved in DNA repair
DN407_RS11065	COG2223	nitrite transmembrane transporter activity
DN407_RS11070	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS11075	COG1169	isochorismate synthase
DN407_RS11080	COG1021	2,3-dihydroxybenzoate-AMP ligase
DN407_RS11085	COG1535	isochorismatase
DN407_RS11085	COG3433	isochorismatase activity
DN407_RS11090	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DN407_RS11095	COG3251	PFAM MbtH domain protein
DN407_RS11100	COG2814	Major facilitator Superfamily
DN407_RS11115	COG0776	regulation of translation
DN407_RS11125	COG2318	DinB family
DN407_RS11135	COG1115	amino acid carrier protein
DN407_RS11155	COG1187	pseudouridine synthase activity
DN407_RS11160	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DN407_RS11165	COG1136	(ABC) transporter
DN407_RS11180	COG0028	Belongs to the TPP enzyme family
DN407_RS11220	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DN407_RS11275	COG1247	-acetyltransferase
DN407_RS11300	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
DN407_RS11310	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS11340	COG0583	DNA-binding transcription factor activity
DN407_RS11345	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DN407_RS11365	COG0583	DNA-binding transcription factor activity
DN407_RS11370	COG2258	MOSC domain
DN407_RS11385	COG1132	(ABC) transporter
DN407_RS11390	COG1132	(ABC) transporter
DN407_RS11415	COG1396	sequence-specific DNA binding
DN407_RS11475	COG1649	PFAM Uncharacterised BCR, COG1649
DN407_RS11500	COG2971	BadF BadG BcrA BcrD
DN407_RS11510	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DN407_RS11520	COG1846	Transcriptional regulator
DN407_RS11535	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS11550	COG1309	transcriptional regulator
DN407_RS11570	COG3615	Tellurite resistance protein tehB
DN407_RS11570	COG0500	methyltransferase
DN407_RS11580	COG2226	methyltransferase
DN407_RS11585	COG3961	Belongs to the TPP enzyme family
DN407_RS11590	COG1846	Transcriptional regulator
DN407_RS11620	COG2195	Cleaves the N-terminal amino acid of tripeptides
DN407_RS11645	COG2002	toxin-antitoxin pair type II binding
DN407_RS11655	COG0730	response to heat
DN407_RS11660	COG0110	maltose O-acetyltransferase activity
DN407_RS11665	COG1686	Belongs to the peptidase S11 family
DN407_RS11680	COG2814	Major facilitator Superfamily
DN407_RS11735	COG2312	Erythromycin esterase
DN407_RS11740	COG0741	lytic transglycosylase activity
DN407_RS11745	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS11760	COG1396	sequence-specific DNA binding
DN407_RS11780	COG1309	transcriptional regulator
DN407_RS11785	COG0367	asparagine synthase
DN407_RS11790	COG4585	Histidine kinase
DN407_RS11800	COG1404	Belongs to the peptidase S8 family
DN407_RS11830	COG1760	l-serine dehydratase
DN407_RS11835	COG1760	l-serine dehydratase
DN407_RS11840	COG0814	amino acid
DN407_RS11870	COG0076	glutamate decarboxylase activity
DN407_RS11895	COG0768	penicillin binding
DN407_RS11900	COG1595	DNA-templated transcription, initiation
DN407_RS11910	COG0768	penicillin binding
DN407_RS11915	COG0768	penicillin binding
DN407_RS11925	COG1408	metallophosphoesterase
DN407_RS11935	COG1131	(ABC) transporter
DN407_RS11945	COG1309	transcriptional regulator
DN407_RS11960	COG1960	acyl-CoA dehydrogenase activity
DN407_RS11965	COG0439	Biotin carboxylase
DN407_RS11970	COG0511	ligase activity, forming carbon-carbon bonds
DN407_RS11975	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DN407_RS11980	COG1024	Enoyl-CoA hydratase
DN407_RS11985	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DN407_RS11990	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DN407_RS12040	COG1686	Belongs to the peptidase S11 family
DN407_RS12065	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DN407_RS12080	COG3227	Zinc metalloprotease (Elastase)
DN407_RS12085	COG2207	Transcriptional regulator
DN407_RS12125	COG1733	regulation of RNA biosynthetic process
DN407_RS12140	COG1942	4-Oxalocrotonate Tautomerase
DN407_RS12145	COG0583	DNA-binding transcription factor activity
DN407_RS12185	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_RS12195	COG2368	4-hydroxyphenylacetate
DN407_RS12220	COG2323	membrane
DN407_RS12225	COG0693	protein deglycase activity
DN407_RS12235	COG3386	PFAM SMP-30 Gluconolaconase
DN407_RS12250	COG3773	Cell wall hydrolase
DN407_RS12260	COG0745	RESPONSE REGULATOR receiver
DN407_RS12265	COG2205	protein histidine kinase activity
DN407_RS12270	COG0488	(ABC) transporter
DN407_RS12280	COG1136	(ABC) transporter
DN407_RS12285	COG0577	efflux transmembrane transporter activity
DN407_RS12305	COG0460	homoserine dehydrogenase
DN407_RS12310	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_RS12320	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DN407_RS12350	COG0582	viral genome integration into host DNA
DN407_RS12375	COG1396	sequence-specific DNA binding
DN407_RS12405	COG5377	YqaJ viral recombinase family
DN407_RS12410	COG3723	Recombinational DNA repair protein, rece pathway
DN407_RS12430	COG5582	Belongs to the UPF0302 family
DN407_RS12520	COG5484	DNA packaging
DN407_RS12520	COG3728	DNA packaging
DN407_RS12620	COG4824	toxin secretion phage lysis holin
DN407_RS12660	COG1113	amino acid transport
DN407_RS12665	COG1280	lysine exporter protein (LysE YggA)
DN407_RS12670	COG3403	YqcI/YcgG family
DN407_RS12675	COG5577	PFAM Coat F domain
DN407_RS12720	COG2124	cytochrome p450
DN407_RS12760	COG0561	phosphatase activity
DN407_RS12765	COG5002	protein histidine kinase activity
DN407_RS12770	COG0768	penicillin binding
DN407_RS12780	COG1819	glycosyl
DN407_RS12785	COG1794	racemase activity, acting on amino acids and derivatives
DN407_RS12810	COG2205	protein histidine kinase activity
DN407_RS12880	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DN407_RS12890	COG0745	RESPONSE REGULATOR receiver
DN407_RS12895	COG5002	protein histidine kinase activity
DN407_RS12900	COG0604	alcohol dehydrogenase
DN407_RS12905	COG0671	phosphoesterase, PA-phosphatase related
DN407_RS12910	COG0768	penicillin binding
DN407_RS12965	COG0693	protein deglycase activity
DN407_RS12980	COG2814	Major facilitator Superfamily
DN407_RS12985	COG2814	Major facilitator Superfamily
DN407_RS13000	COG0584	glycerophosphoryl diester phosphodiesterase
DN407_RS13015	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_RS13020	COG0697	spore germination
DN407_RS13045	COG0494	nUDIX hydrolase
DN407_RS13055	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_RS13060	COG2223	nitrite transmembrane transporter activity
DN407_RS13075	COG0592	DNA-directed DNA polymerase activity
DN407_RS13095	COG3878	Protein conserved in bacteria
DN407_RS13120	COG4667	esterase of the alpha-beta hydrolase superfamily
DN407_RS13160	COG0322	excinuclease ABC activity
DN407_RS13200	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DN407_RS13230	COG1011	Hydrolase
DN407_RS13235	COG0745	RESPONSE REGULATOR receiver
DN407_RS13240	COG5002	protein histidine kinase activity
DN407_RS13255	COG1136	(ABC) transporter
DN407_RS13260	COG0577	efflux transmembrane transporter activity
DN407_RS13265	COG1073	alpha beta
DN407_RS13270	COG0657	acetylesterase activity
DN407_RS13275	COG0076	glutamate decarboxylase activity
DN407_RS13290	COG1523	belongs to the glycosyl hydrolase 13 family
DN407_RS13295	COG3227	Zinc metalloprotease (Elastase)
DN407_RS13300	COG0737	Belongs to the 5'-nucleotidase family
DN407_RS13315	COG0201	protein transport
DN407_RS13320	COG0697	spore germination
DN407_RS13325	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_RS13360	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS13375	COG2959	enzyme of heme biosynthesis
DN407_RS13415	COG1309	transcriptional regulator
DN407_RS13460	COG3284	Transcriptional regulator
DN407_RS13475	COG1349	DNA-binding transcription factor activity
DN407_RS13490	COG1959	2 iron, 2 sulfur cluster binding
DN407_RS13505	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DN407_RS13510	COG0508	dehydrogenase complex catalyzes the overall conversion of
DN407_RS13515	COG0022	dehydrogenase e1 component
DN407_RS13520	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DN407_RS13530	COG2814	Major facilitator Superfamily
DN407_RS13540	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS13570	COG4176	ABC-type proline glycine betaine transport system permease component
DN407_RS13575	COG0517	IMP dehydrogenase activity
DN407_RS13575	COG4175	Glycine betaine
DN407_RS13605	COG2153	protein acetylation
DN407_RS13610	COG3397	chitin binding
DN407_RS13615	COG1819	glycosyl
DN407_RS13635	COG2205	protein histidine kinase activity
DN407_RS13640	COG2226	methyltransferase
DN407_RS13645	COG2315	Protein conserved in bacteria
DN407_RS13690	COG0456	acetyltransferase
DN407_RS13695	COG3973	AAA domain
DN407_RS13710	COG0514	ATP-dependent DNA helicase (RecQ)
DN407_RS13740	COG4637	Psort location Cytoplasmic, score
DN407_RS13755	COG3397	chitin binding
DN407_RS13770	COG1162	GTPase activity
DN407_RS13775	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DN407_RS13780	COG1115	amino acid carrier protein
DN407_RS13785	COG1012	belongs to the aldehyde dehydrogenase family
DN407_RS13790	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DN407_RS13800	COG3938	Belongs to the proline racemase family
DN407_RS13805	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DN407_RS13845	COG0586	Pfam SNARE associated Golgi protein
DN407_RS13855	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DN407_RS13865	COG4166	transmembrane transport
DN407_RS13875	COG4948	Mandelate Racemase Muconate Lactonizing
DN407_RS13890	COG0667	Aldo Keto reductase
DN407_RS13935	COG3850	Histidine kinase
DN407_RS13935	COG5002	protein histidine kinase activity
DN407_RS13940	COG0745	RESPONSE REGULATOR receiver
DN407_RS13980	COG1164	Oligoendopeptidase f
DN407_RS13985	COG1307	EDD domain protein, DegV family
DN407_RS14025	COG2814	Major facilitator Superfamily
DN407_RS14035	COG1664	Polymer-forming cytoskeletal
DN407_RS14040	COG0789	Transcriptional regulator
DN407_RS14045	COG4533	DNA binding
DN407_RS14050	COG2814	Major facilitator Superfamily
DN407_RS14050	COG0477	Major facilitator Superfamily
DN407_RS14075	COG2261	transglycosylase associated protein
DN407_RS14090	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DN407_RS14125	COG0436	Aminotransferase
DN407_RS14130	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DN407_RS14140	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DN407_RS14155	COG1131	(ABC) transporter
DN407_RS14205	COG0628	permease
DN407_RS14215	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DN407_RS14220	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DN407_RS14225	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DN407_RS14255	COG2746	aminoglycoside 3-N-acetyltransferase activity
DN407_RS14275	COG0697	spore germination
DN407_RS14305	COG4912	Dna alkylation repair
DN407_RS14310	COG0346	lactoylglutathione lyase activity
DN407_RS14315	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS14325	COG0861	Integral membrane protein TerC family
DN407_RS14330	COG1368	sulfuric ester hydrolase activity
DN407_RS14335	COG0488	(ABC) transporter
DN407_RS14340	COG2409	Drug exporters of the RND superfamily
DN407_RS14340	COG1033	growth of symbiont in host cell
DN407_RS14345	COG1309	transcriptional regulator
DN407_RS14360	COG0287	Prephenate dehydrogenase
DN407_RS14375	COG1605	Chorismate mutase
DN407_RS14375	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DN407_RS14430	COG3584	3D domain protein
DN407_RS14430	COG1388	LysM domain
DN407_RS14440	COG0346	lactoylglutathione lyase activity
DN407_RS14445	COG0277	FAD linked oxidase domain protein
DN407_RS14475	COG1879	ABC-type sugar transport system periplasmic component
DN407_RS14480	COG1172	Belongs to the binding-protein-dependent transport system permease family
DN407_RS14485	COG1172	Belongs to the binding-protein-dependent transport system permease family
DN407_RS14495	COG2390	Transcriptional regulator
DN407_RS14500	COG1070	Carbohydrate kinase
DN407_RS14520	COG2329	Antibiotic biosynthesis monooxygenase
DN407_RS14540	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_RS14555	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DN407_RS14560	COG4187	Peptidase family M20/M25/M40
DN407_RS14565	COG1414	Transcriptional regulator
DN407_RS14575	COG0833	amino acid
DN407_RS14590	COG3239	Fatty acid desaturase
DN407_RS14600	COG2720	vancomycin resistance protein
DN407_RS14605	COG1785	Belongs to the alkaline phosphatase family
DN407_RS14615	COG3655	Transcriptional regulator
DN407_RS14635	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS14640	COG0346	lactoylglutathione lyase activity
DN407_RS14665	COG0714	Associated with various cellular activities
DN407_RS14690	COG0463	Glycosyl transferase, family 2
DN407_RS14720	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DN407_RS14725	COG0753	catalase activity
DN407_RS14765	COG0714	Associated with various cellular activities
DN407_RS14795	COG0778	Nitroreductase
DN407_RS14800	COG1846	Transcriptional regulator
DN407_RS14820	COG3831	ATPase activity
DN407_RS14820	COG4884	unkown
DN407_RS14845	COG0590	tRNA wobble adenosine to inosine editing
DN407_RS14845	COG0037	tRNA processing
DN407_RS14850	COG0456	acetyltransferase
DN407_RS14865	COG0697	spore germination
DN407_RS14870	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_RS14920	COG0730	response to heat
DN407_RS14930	COG0833	amino acid
DN407_RS14945	COG4335	DNA alkylation repair
DN407_RS14980	COG0768	penicillin binding
DN407_RS15010	COG1984	allophanate hydrolase subunit 2
DN407_RS15015	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DN407_RS15020	COG1414	Transcriptional regulator
DN407_RS15030	COG3142	Participates in the control of copper homeostasis
DN407_RS15035	COG0640	Transcriptional regulator
DN407_RS15045	COG1960	acyl-CoA dehydrogenase activity
DN407_RS15060	COG3314	Sporulation integral membrane protein YlbJ
DN407_RS15080	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
DN407_RS15095	COG0574	Belongs to the PEP-utilizing enzyme family
DN407_RS15095	COG3848	Pyruvate phosphate dikinase
DN407_RS15115	COG1522	sequence-specific DNA binding
DN407_RS15120	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS15125	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS15145	COG1063	alcohol dehydrogenase
DN407_RS15155	COG1027	Aspartate ammonia-lyase
DN407_RS15160	COG0252	asparaginase activity
DN407_RS15165	COG1396	sequence-specific DNA binding
DN407_RS15200	COG5002	protein histidine kinase activity
DN407_RS15225	COG2207	Transcriptional regulator
DN407_RS15245	COG0322	excinuclease ABC activity
DN407_RS15250	COG0531	amino acid
DN407_RS15255	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DN407_RS15265	COG0531	amino acid
DN407_RS15270	COG0697	spore germination
DN407_RS15275	COG0784	Response regulator, receiver
DN407_RS15280	COG4191	Histidine kinase
DN407_RS15290	COG1115	amino acid carrier protein
DN407_RS15315	COG0737	Belongs to the 5'-nucleotidase family
DN407_RS15320	COG2267	carboxylic ester hydrolase activity
DN407_RS15325	COG1335	isochorismatase
DN407_RS15345	COG0583	DNA-binding transcription factor activity
DN407_RS15360	COG2814	Major facilitator Superfamily
DN407_RS15395	COG0598	Magnesium transport protein CorA
DN407_RS15420	COG1073	alpha beta
DN407_RS15440	COG0415	Belongs to the DNA photolyase family
DN407_RS15445	COG0288	reversible hydration of carbon dioxide
DN407_RS15455	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DN407_RS15460	COG5609	conserved protein (DUF2294)
DN407_RS15470	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_RS15475	COG5002	protein histidine kinase activity
DN407_RS15480	COG0745	RESPONSE REGULATOR receiver
DN407_RS15485	COG0456	acetyltransferase
DN407_RS15490	COG1575	Belongs to the MenA family. Type 1 subfamily
DN407_RS15500	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS15510	COG0798	PFAM Bile acid sodium symporter
DN407_RS15515	COG0346	lactoylglutathione lyase activity
DN407_RS15520	COG0640	Transcriptional regulator
DN407_RS15530	COG1266	CAAX protease self-immunity
DN407_RS15545	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DN407_RS15575	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DN407_RS15575	COG3320	Male sterility
DN407_RS15585	COG2814	Major facilitator Superfamily
DN407_RS15590	COG1309	transcriptional regulator
DN407_RS15595	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS15600	COG1522	sequence-specific DNA binding
DN407_RS15615	COG0346	lactoylglutathione lyase activity
DN407_RS15710	COG2814	Major facilitator Superfamily
DN407_RS15725	COG2515	1-aminocyclopropane-1-carboxylate deaminase
DN407_RS15735	COG1690	Belongs to the RtcB family
DN407_RS15745	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
DN407_RS15765	COG0577	efflux transmembrane transporter activity
DN407_RS15785	COG3850	Histidine kinase
DN407_RS15785	COG5002	protein histidine kinase activity
DN407_RS15795	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS15825	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DN407_RS15870	COG3409	Peptidoglycan-binding domain 1 protein
DN407_RS15870	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_RS15940	COG1876	peptidase activity
DN407_RS15945	COG2843	Capsule synthesis protein
DN407_RS15955	COG0477	Major facilitator Superfamily
DN407_RS15970	COG1846	Transcriptional regulator
DN407_RS15975	COG2814	Major facilitator Superfamily
DN407_RS15995	COG2031	fatty acid transporter
DN407_RS16005	COG2249	NAD(P)H dehydrogenase (quinone) activity
DN407_RS16060	COG1288	antiporter activity
DN407_RS16065	COG2356	endonuclease I
DN407_RS16080	COG3620	sequence-specific DNA binding
DN407_RS16085	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DN407_RS16095	COG1733	regulation of RNA biosynthetic process
DN407_RS16100	COG0778	Nitroreductase
DN407_RS16130	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS16140	COG1131	(ABC) transporter
DN407_RS16165	COG1011	Hydrolase
DN407_RS16175	COG2365	Tyrosine phosphatase family
DN407_RS16210	COG0628	permease
DN407_RS16235	COG0500	methyltransferase
DN407_RS16245	COG0477	Major facilitator Superfamily
DN407_RS16275	COG1253	flavin adenine dinucleotide binding
DN407_RS16280	COG0789	Transcriptional regulator
DN407_RS16290	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DN407_RS16320	COG0697	spore germination
DN407_RS16330	COG1357	PFAM Pentapeptide repeats (8 copies)
DN407_RS16335	COG3813	Protein conserved in bacteria
DN407_RS16340	COG2706	6-phosphogluconolactonase activity
DN407_RS16345	COG1070	Carbohydrate kinase
DN407_RS16360	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DN407_RS16365	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DN407_RS16370	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DN407_RS16385	COG0604	alcohol dehydrogenase
DN407_RS16390	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DN407_RS16400	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS16420	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DN407_RS16420	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DN407_RS16425	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DN407_RS16425	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DN407_RS16430	COG1733	regulation of RNA biosynthetic process
DN407_RS16445	COG0656	L-ascorbic acid biosynthetic process
DN407_RS16450	COG2814	Major facilitator Superfamily
DN407_RS16470	COG1846	Transcriptional regulator
DN407_RS16480	COG0814	amino acid
DN407_RS16520	COG2188	Transcriptional regulator
DN407_RS16525	COG0673	inositol 2-dehydrogenase activity
DN407_RS16530	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DN407_RS16535	COG1733	regulation of RNA biosynthetic process
DN407_RS16540	COG1733	regulation of RNA biosynthetic process
DN407_RS16565	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS16585	COG0384	phenazine biosynthesis protein PhzF
DN407_RS16595	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_RS16600	COG2249	NAD(P)H dehydrogenase (quinone) activity
DN407_RS16605	COG1733	regulation of RNA biosynthetic process
DN407_RS16630	COG1191	sigma factor activity
DN407_RS16695	COG1151	hydroxylamine reductase activity
DN407_RS16720	COG2072	flavoprotein involved in K transport
DN407_RS16755	COG1113	amino acid transport
DN407_RS16760	COG2814	Major facilitator Superfamily
DN407_RS16795	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DN407_RS16800	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DN407_RS16810	COG1247	-acetyltransferase
DN407_RS16820	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_RS16825	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_RS16850	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS16865	COG0583	DNA-binding transcription factor activity
DN407_RS16875	COG2890	protein-(glutamine-N5) methyltransferase activity
DN407_RS16890	COG1193	negative regulation of DNA recombination
DN407_RS16900	COG2162	N-hydroxyarylamine O-acetyltransferase activity
DN407_RS16905	COG1164	Oligoendopeptidase f
DN407_RS16910	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_RS16935	COG0584	glycerophosphoryl diester phosphodiesterase
DN407_RS16945	COG0640	Transcriptional regulator
DN407_RS16950	COG0604	alcohol dehydrogenase
DN407_RS16960	COG0457	Tetratricopeptide repeat
DN407_RS16975	COG0277	FAD linked oxidase domain protein
DN407_RS17000	COG1183	phosphatidylcholine synthase activity
DN407_RS17010	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS17010	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_RS17015	COG1252	NADH dehydrogenase
DN407_RS17025	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DN407_RS17035	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_RS17050	COG0457	Tetratricopeptide repeat
DN407_RS17095	COG3300	MHYT domain
DN407_RS17095	COG5001	Diguanylate cyclase
DN407_RS17100	COG0488	(ABC) transporter
DN407_RS17130	COG3852	Histidine kinase
DN407_RS17140	COG1285	pathogenesis
DN407_RS17150	COG2514	catechol 2,3-dioxygenase activity
DN407_RS17155	COG2720	vancomycin resistance protein
DN407_RS17190	COG0716	FMN binding
DN407_RS17205	COG0494	nUDIX hydrolase
DN407_RS17225	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS17235	COG0165	Argininosuccinate lyase
DN407_RS17250	COG4145	pantothenate transmembrane transporter activity
DN407_RS17260	COG1012	belongs to the aldehyde dehydrogenase family
DN407_RS17265	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS17275	COG1657	PFAM Prenyltransferase squalene oxidase
DN407_RS17280	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
DN407_RS17285	COG2962	Rard protein
DN407_RS17290	COG3326	Membrane
DN407_RS17305	COG0489	protein tyrosine kinase activity
DN407_RS17315	COG0314	molybdopterin synthase activity
DN407_RS17320	COG0303	'Molybdopterin
DN407_RS17325	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DN407_RS17330	COG2116	formate transmembrane transporter activity
DN407_RS17340	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DN407_RS17345	COG5609	conserved protein (DUF2294)
DN407_RS17350	COG2427	Protein of unknown function (DUF1641)
DN407_RS17355	COG3383	formate dehydrogenase (NAD+) activity
DN407_RS17360	COG0697	spore germination
DN407_RS17375	COG0531	amino acid
DN407_RS17410	COG2226	methyltransferase
DN407_RS17415	COG4166	transmembrane transport
DN407_RS17420	COG4166	transmembrane transport
DN407_RS17425	COG4166	transmembrane transport
DN407_RS17430	COG1316	TRANSCRIPTIONal
DN407_RS17440	COG1595	DNA-templated transcription, initiation
DN407_RS17450	COG1131	(ABC) transporter
DN407_RS17470	COG0673	inositol 2-dehydrogenase activity
DN407_RS17475	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DN407_RS17480	COG0187	DNA topoisomerase II activity
DN407_RS17485	COG1832	CoA-binding protein
DN407_RS17490	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DN407_RS17495	COG0745	RESPONSE REGULATOR receiver
DN407_RS17505	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DN407_RS17505	COG1328	CTP reductase activity
DN407_RS17515	COG4841	protein insertion into membrane
DN407_RS17520	COG0824	Thioesterase
DN407_RS17550	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DN407_RS17565	COG1132	(ABC) transporter
DN407_RS17570	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DN407_RS17600	COG2211	Major facilitator Superfamily
DN407_RS17610	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DN407_RS17625	COG0183	Belongs to the thiolase family
DN407_RS17630	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_RS17635	COG1268	BioY protein
DN407_RS17640	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_RS17645	COG1396	sequence-specific DNA binding
DN407_RS17670	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
DN407_RS17690	COG0830	nickel cation binding
DN407_RS17730	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS17745	COG5002	protein histidine kinase activity
DN407_RS17750	COG0400	carboxylic ester hydrolase activity
DN407_RS17755	COG0346	lactoylglutathione lyase activity
DN407_RS17765	COG0069	glutamate synthase activity
DN407_RS17770	COG1902	pentaerythritol trinitrate reductase activity
DN407_RS17775	COG1329	Transcriptional regulator
DN407_RS17780	COG0010	Belongs to the arginase family
DN407_RS17805	COG2226	methyltransferase
DN407_RS17835	COG4846	Membrane protein involved in cytochrome C biogenesis
DN407_RS17840	COG0785	Cytochrome C biogenesis protein
DN407_RS17855	COG1473	amidohydrolase
DN407_RS17865	COG1131	(ABC) transporter
DN407_RS17880	COG0583	DNA-binding transcription factor activity
DN407_RS17890	COG1346	cytolysis
DN407_RS17905	COG0730	response to heat
DN407_RS17930	COG1132	(ABC) transporter
DN407_RS17935	COG1132	(ABC) transporter
DN407_RS17975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DN407_RS17980	COG0737	Belongs to the 5'-nucleotidase family
DN407_RS17990	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DN407_RS18010	COG1695	Transcriptional regulator
DN407_RS18015	COG0174	glutamine synthetase
DN407_RS18020	COG0789	Transcriptional regulator
DN407_RS18025	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
DN407_RS18030	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DN407_RS18035	COG2860	membrane
DN407_RS18040	COG0464	growth
DN407_RS18070	COG3584	3D domain protein
DN407_RS18070	COG1388	LysM domain
DN407_RS18075	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DN407_RS18075	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DN407_RS18075	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DN407_RS18080	COG1105	Belongs to the carbohydrate kinase PfkB family
DN407_RS18085	COG1349	DNA-binding transcription factor activity
DN407_RS18090	COG1979	alcohol dehydrogenase
DN407_RS18095	COG2322	membrane
DN407_RS18105	COG1113	amino acid transport
DN407_RS18120	COG1408	metallophosphoesterase
DN407_RS18125	COG2116	formate transmembrane transporter activity
DN407_RS18140	COG2217	Heavy metal translocating P-type atpase
DN407_RS18145	COG2608	mercury ion transmembrane transporter activity
DN407_RS18150	COG1937	Protein conserved in bacteria
DN407_RS18160	COG2819	hydrolase of the alpha beta superfamily
DN407_RS18165	COG1120	ATPase activity
DN407_RS18170	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_RS18175	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_RS18180	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_RS18190	COG2169	Transcriptional regulator
DN407_RS18195	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DN407_RS18200	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DN407_RS18225	COG3300	MHYT domain
DN407_RS18225	COG5001	Diguanylate cyclase
DN407_RS18245	COG1086	Polysaccharide biosynthesis protein
DN407_RS18265	COG1346	cytolysis
DN407_RS18275	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_RS18285	COG2188	Transcriptional regulator
DN407_RS18290	COG2723	6-phospho-beta-galactosidase activity
DN407_RS18300	COG1404	Belongs to the peptidase S8 family
DN407_RS18305	COG3773	Cell wall hydrolase
DN407_RS18320	COG1368	sulfuric ester hydrolase activity
DN407_RS18325	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DN407_RS18350	COG4550	Control of competence regulator ComK, YlbF/YmcA
DN407_RS18360	COG1013	pyruvate-flavodoxin oxidoreductase activity
DN407_RS18365	COG0674	pyruvate-flavodoxin oxidoreductase activity
DN407_RS18365	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DN407_RS18375	COG2359	stage V sporulation protein S
DN407_RS18380	COG1692	metallophosphoesterase
DN407_RS18400	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DN407_RS18405	COG1426	Protein conserved in bacteria
DN407_RS18420	COG0300	oxidoreductase activity
DN407_RS18425	COG0612	Peptidase, M16
DN407_RS18430	COG0612	Peptidase, M16
DN407_RS18435	COG1079	Belongs to the binding-protein-dependent transport system permease family
DN407_RS18440	COG4603	Belongs to the binding-protein-dependent transport system permease family
DN407_RS18445	COG3845	ABC transporter
DN407_RS18450	COG1744	ABC transporter substrate-binding protein PnrA-like
DN407_RS18455	COG2188	Transcriptional regulator
DN407_RS18475	COG0740	serine-type endopeptidase activity
DN407_RS18480	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DN407_RS18490	COG0527	aspartate kinase activity
DN407_RS18495	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DN407_RS18500	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DN407_RS18635	COG1278	Cold shock
DN407_RS18645	COG0582	viral genome integration into host DNA
DN407_RS18680	COG0305	Participates in initiation and elongation during chromosome replication
DN407_RS18755	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DN407_RS18760	COG1873	PFAM PRC-barrel domain
DN407_RS18765	COG0612	Peptidase, M16
DN407_RS18770	COG0726	polysaccharide deacetylase
DN407_RS18785	COG0196	riboflavin kinase activity
DN407_RS18795	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DN407_RS18800	COG1550	Protein conserved in bacteria
DN407_RS18810	COG1358	cellular component organization or biogenesis
DN407_RS18815	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DN407_RS18820	COG0195	Participates in both transcription termination and antitermination
DN407_RS18840	COG0750	zinc metalloprotease
DN407_RS18850	COG4589	Belongs to the CDS family
DN407_RS18895	COG4974	Belongs to the 'phage' integrase family
DN407_RS18905	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DN407_RS18910	COG0758	DNA mediated transformation
DN407_RS18915	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DN407_RS18955	COG1837	Belongs to the UPF0109 family
DN407_RS18965	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DN407_RS18975	COG0552	protein localization to endoplasmic reticulum
DN407_RS18980	COG1196	nuclear chromosome segregation
DN407_RS18990	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DN407_RS18995	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS19000	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DN407_RS19015	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DN407_RS19020	COG1461	Dihydroxyacetone kinase
DN407_RS19025	COG1302	Protein conserved in bacteria
DN407_RS19040	COG1564	THIamine pyrophosphokinase
DN407_RS19045	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DN407_RS19055	COG2815	serine threonine protein kinase
DN407_RS19055	COG0515	serine threonine protein kinase
DN407_RS19060	COG0631	protein serine/threonine phosphatase activity
DN407_RS19070	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DN407_RS19070	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DN407_RS19085	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DN407_RS19090	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DN407_RS19110	COG1561	YicC-like family, N-terminal region
DN407_RS19115	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DN407_RS19130	COG0006	proline dipeptidase activity
DN407_RS19145	COG3069	C4-dicarboxylate transmembrane transporter activity
DN407_RS19155	COG0546	phosphoglycolate phosphatase activity
DN407_RS19210	COG0564	pseudouridine synthase activity
DN407_RS19230	COG3599	regulation of cell shape
DN407_RS19235	COG2302	S4 RNA-binding domain
DN407_RS19240	COG0762	integral membrane protein
DN407_RS19250	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DN407_RS19260	COG1873	PFAM PRC-barrel domain
DN407_RS19265	COG1191	sigma factor activity
DN407_RS19270	COG1191	sigma factor activity
DN407_RS19280	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DN407_RS19285	COG0849	cell division
DN407_RS19305	COG0772	Belongs to the SEDS family
DN407_RS19325	COG0768	penicillin binding
DN407_RS19330	COG0768	penicillin binding
DN407_RS19350	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DN407_RS19365	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DN407_RS19370	COG1399	metal-binding, possibly nucleic acid-binding protein
DN407_RS19380	COG3480	Lon protease (S16) C-terminal proteolytic domain
DN407_RS19385	COG1752	Esterase of the alpha-beta hydrolase superfamily
DN407_RS19390	COG3314	Sporulation integral membrane protein YlbJ
DN407_RS19400	COG0742	ribosomal rna small subunit methyltransferase
DN407_RS19415	COG3679	Belongs to the UPF0342 family
DN407_RS19420	COG0406	alpha-ribazole phosphatase activity
DN407_RS19435	COG2340	Cysteine-rich secretory protein family
DN407_RS19450	COG3336	cytochrome c oxidase
DN407_RS19485	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
DN407_RS19495	COG0772	Belongs to the SEDS family
DN407_RS19505	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DN407_RS19510	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DN407_RS19520	COG4896	Protein conserved in bacteria
DN407_RS19535	COG1217	gtp-binding protein TYPA
DN407_RS19545	COG0483	inositol monophosphate 1-phosphatase activity
DN407_RS19565	COG1982	Orn Lys Arg decarboxylase major
DN407_RS19615	COG0022	dehydrogenase e1 component
DN407_RS19620	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DN407_RS19635	COG0561	phosphatase activity
DN407_RS19650	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DN407_RS19655	COG0569	domain protein
DN407_RS19675	COG0583	DNA-binding transcription factor activity
DN407_RS19680	COG0517	IMP dehydrogenase activity
DN407_RS19690	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
DN407_RS19695	COG4703	Protein of unknown function (DUF1797)
DN407_RS19710	COG2200	EAL domain
DN407_RS19715	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS19720	COG1408	metallophosphoesterase
DN407_RS19765	COG2814	Major facilitator Superfamily
DN407_RS19785	COG3209	COG3209 Rhs family protein
DN407_RS19795	COG2205	protein histidine kinase activity
DN407_RS19805	COG0436	Aminotransferase
DN407_RS19810	COG1609	Transcriptional regulator
DN407_RS19815	COG3833	ABC-type maltose transport systems, permease component
DN407_RS19820	COG1175	transmembrane transport
DN407_RS19825	COG2182	Extracellular solute-binding protein
DN407_RS19835	COG0366	Alpha amylase catalytic
DN407_RS19840	COG3842	ATPase activity
DN407_RS19880	COG0183	Belongs to the thiolase family
DN407_RS19915	COG1695	Transcriptional regulator
DN407_RS19920	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS19940	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DN407_RS19945	COG0436	Aminotransferase
DN407_RS19980	COG2084	Dehydrogenase
DN407_RS19990	COG2199	diguanylate cyclase activity
DN407_RS19995	COG0778	Nitroreductase
DN407_RS20020	COG1263	PTS System
DN407_RS20020	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DN407_RS20020	COG2190	(PTS) system
DN407_RS20025	COG3711	transcriptional antiterminator
DN407_RS20035	COG2188	Transcriptional regulator
DN407_RS20045	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DN407_RS20075	COG1547	Domain of unknown function (DUF309)
DN407_RS20080	COG0456	acetyltransferase
DN407_RS20085	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DN407_RS20090	COG4086	secreted protein
DN407_RS20095	COG0561	phosphatase activity
DN407_RS20100	COG0697	spore germination
DN407_RS20115	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DN407_RS20140	COG0733	neurotransmitter:sodium symporter activity
DN407_RS20160	COG1686	Belongs to the peptidase S11 family
DN407_RS20170	COG1725	Transcriptional regulator
DN407_RS20175	COG1131	(ABC) transporter
DN407_RS20190	COG1846	Transcriptional regulator
DN407_RS20205	COG0598	Magnesium transport protein CorA
DN407_RS20230	COG4974	Belongs to the 'phage' integrase family
DN407_RS20240	COG0735	belongs to the Fur family
DN407_RS20245	COG1300	Membrane
DN407_RS20265	COG0667	Aldo Keto reductase
DN407_RS20270	COG0656	L-ascorbic acid biosynthetic process
DN407_RS20275	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DN407_RS20275	COG0456	acetyltransferase
DN407_RS20285	COG0737	Belongs to the 5'-nucleotidase family
DN407_RS20285	COG4085	toxin activity
DN407_RS20285	COG1525	nuclease
DN407_RS20295	COG0596	Alpha beta hydrolase
DN407_RS20300	COG2056	Na+-H+ antiporter family
DN407_RS20305	COG1609	Transcriptional regulator
DN407_RS20310	COG0456	acetyltransferase
DN407_RS20315	COG1073	alpha beta
DN407_RS20335	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DN407_RS20335	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DN407_RS20340	COG0307	riboflavin synthase, alpha
DN407_RS20370	COG2226	methyltransferase
DN407_RS20370	COG1073	alpha beta
DN407_RS20385	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DN407_RS20395	COG1757	Na H antiporter
DN407_RS20400	COG0737	Belongs to the 5'-nucleotidase family
DN407_RS20410	COG1522	sequence-specific DNA binding
DN407_RS20455	COG0300	oxidoreductase activity
DN407_RS20460	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS20465	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DN407_RS20470	COG1760	l-serine dehydratase
DN407_RS20475	COG1760	l-serine dehydratase
DN407_RS20505	COG1285	pathogenesis
DN407_RS20515	COG2195	Cleaves the N-terminal amino acid of tripeptides
DN407_RS20520	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS20535	COG1376	ErfK ybiS ycfS ynhG family protein
DN407_RS20540	COG4129	membrane
DN407_RS20545	COG1126	abc transporter atp-binding protein
DN407_RS20550	COG0765	amino acid transport
DN407_RS20555	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DN407_RS20575	COG2323	membrane
DN407_RS20580	COG0772	Belongs to the SEDS family
DN407_RS20585	COG0508	dehydrogenase complex catalyzes the overall conversion of
DN407_RS20590	COG0022	dehydrogenase e1 component
DN407_RS20595	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DN407_RS20600	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DN407_RS20615	COG0280	phosphate acetyltransferase
DN407_RS20625	COG3290	protein histidine kinase activity
DN407_RS20625	COG3829	transcription factor binding
DN407_RS20635	COG0584	glycerophosphoryl diester phosphodiesterase
DN407_RS20640	COG3093	addiction module antidote protein HigA
DN407_RS20660	COG0750	zinc metalloprotease
DN407_RS20665	COG0497	DNA recombination
DN407_RS20675	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
DN407_RS20685	COG0142	geranyltranstransferase activity
DN407_RS20710	COG1302	Protein conserved in bacteria
DN407_RS20715	COG0439	Biotin carboxylase
DN407_RS20720	COG0511	ligase activity, forming carbon-carbon bonds
DN407_RS20765	COG3854	ATPases associated with a variety of cellular activities
DN407_RS20790	COG0006	proline dipeptidase activity
DN407_RS20805	COG3872	metal-dependent enzyme
DN407_RS20815	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DN407_RS20850	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_RS20860	COG1609	Transcriptional regulator
DN407_RS20870	COG2076	Multidrug Resistance protein
DN407_RS20875	COG2076	Multidrug Resistance protein
DN407_RS20905	COG1131	(ABC) transporter
DN407_RS20910	COG1725	Transcriptional regulator
DN407_RS20945	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DN407_RS21010	COG1459	type II secretion system
DN407_RS21015	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DN407_RS21070	COG0646	methionine synthase
DN407_RS21070	COG1410	methionine synthase
DN407_RS21075	COG0646	methionine synthase
DN407_RS21075	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DN407_RS21080	COG0626	cystathionine gamma-synthase activity
DN407_RS21085	COG0626	cystathionine gamma-synthase activity
DN407_RS21105	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS21115	COG1940	carbohydrate kinase activity
DN407_RS21120	COG4483	Protein conserved in bacteria
DN407_RS21125	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DN407_RS21130	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DN407_RS21135	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DN407_RS21140	COG0704	Plays a role in the regulation of phosphate uptake
DN407_RS21150	COG0573	inorganic phosphate transmembrane transporter activity
DN407_RS21155	COG0573	inorganic phosphate transmembrane transporter activity
DN407_RS21165	COG0768	penicillin binding
DN407_RS21170	COG0477	Major facilitator Superfamily
DN407_RS21175	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DN407_RS21185	COG5521	maltodextrose utilization protein MalA
DN407_RS21200	COG0735	belongs to the Fur family
DN407_RS21205	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DN407_RS21210	COG1121	(ABC) transporter
DN407_RS21215	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS21245	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DN407_RS21250	COG2384	SAM-dependent methyltransferase
DN407_RS21260	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DN407_RS21265	COG0358	DNA primase activity
DN407_RS21275	COG0517	IMP dehydrogenase activity
DN407_RS21290	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DN407_RS21295	COG0295	cytidine deaminase activity
DN407_RS21300	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DN407_RS21310	COG1480	7TM receptor with intracellular HD hydrolase
DN407_RS21315	COG1702	phosphate starvation-inducible protein PhoH
DN407_RS21335	COG1610	YqeY-like protein
DN407_RS21340	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DN407_RS21345	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DN407_RS21350	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DN407_RS21380	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DN407_RS21385	COG1733	regulation of RNA biosynthetic process
DN407_RS21410	COG1466	dna polymerase III delta subunit
DN407_RS21420	COG0658	competence protein
DN407_RS21420	COG2333	competence protein COMEC
DN407_RS21425	COG2131	deaminase
DN407_RS21430	COG1555	photosystem II stabilization
DN407_RS21430	COG1596	polysaccharide export
DN407_RS21435	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DN407_RS21440	COG2226	methyltransferase
DN407_RS21445	COG0799	negative regulation of ribosome biogenesis
DN407_RS21450	COG1713	HD superfamily hydrolase involved in NAD metabolism
DN407_RS21460	COG1534	Rna-binding protein
DN407_RS21470	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DN407_RS21475	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DN407_RS21500	COG1595	DNA-templated transcription, initiation
DN407_RS21510	COG0778	Nitroreductase
DN407_RS21515	COG2357	RelA SpoT domain protein
DN407_RS21525	COG1785	Belongs to the alkaline phosphatase family
DN407_RS21535	COG2267	carboxylic ester hydrolase activity
DN407_RS21575	COG3186	Phenylalanine-4-hydroxylase
DN407_RS21585	COG2514	catechol 2,3-dioxygenase activity
DN407_RS21590	COG2259	Doxx family
DN407_RS21630	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_RS21645	COG1012	belongs to the aldehyde dehydrogenase family
DN407_RS21645	COG1454	alcohol dehydrogenase
DN407_RS21650	COG0626	cystathionine gamma-synthase activity
DN407_RS21655	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DN407_RS21680	COG0768	penicillin binding
DN407_RS21700	COG0826	peptidase U32
DN407_RS21705	COG0826	peptidase U32
DN407_RS21710	COG4122	O-methyltransferase activity
DN407_RS21715	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DN407_RS21745	COG0628	permease
DN407_RS21765	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DN407_RS21780	COG1104	cysteine desulfurase activity
DN407_RS21785	COG1959	2 iron, 2 sulfur cluster binding
DN407_RS21790	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DN407_RS21805	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DN407_RS21830	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DN407_RS21840	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DN407_RS21840	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DN407_RS21845	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DN407_RS21850	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DN407_RS21850	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DN407_RS21860	COG2244	polysaccharide biosynthetic process
DN407_RS21865	COG2323	membrane
DN407_RS21875	COG1862	Preprotein translocase
DN407_RS21905	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DN407_RS21935	COG0157	Belongs to the NadC ModD family
DN407_RS21940	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DN407_RS21945	COG1104	cysteine desulfurase activity
DN407_RS21950	COG1827	regulation of RNA biosynthetic process
DN407_RS21955	COG2258	MOSC domain
DN407_RS21970	COG0077	Prephenate dehydratase
DN407_RS21975	COG0577	efflux transmembrane transporter activity
DN407_RS21980	COG0577	efflux transmembrane transporter activity
DN407_RS21985	COG1136	(ABC) transporter
DN407_RS21990	COG5002	protein histidine kinase activity
DN407_RS21995	COG0745	RESPONSE REGULATOR receiver
DN407_RS22005	COG3290	protein histidine kinase activity
DN407_RS22020	COG1530	ribonuclease E activity
DN407_RS22025	COG1994	Peptidase M50
DN407_RS22030	COG0739	heme binding
DN407_RS22035	COG2894	cell division
DN407_RS22055	COG1077	Cell shape determining protein MreB Mrl
DN407_RS22075	COG0285	dihydrofolate synthase activity
DN407_RS22095	COG1388	LysM domain
DN407_RS22105	COG0113	porphobilinogen synthase activity
DN407_RS22110	COG1587	Uroporphyrinogen-III synthase
DN407_RS22120	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DN407_RS22130	COG1846	Transcriptional regulator
DN407_RS22135	COG1764	response to oxidative stress
DN407_RS22150	COG1067	ATP-dependent peptidase activity
DN407_RS22150	COG0470	DNA polymerase III
DN407_RS22195	COG0622	Phosphoesterase
DN407_RS22210	COG5401	PFAM Sporulation and spore germination
DN407_RS22225	COG2197	response regulator
DN407_RS22230	COG2233	PERMEase
DN407_RS22235	COG0402	S-adenosylhomocysteine deaminase activity
DN407_RS22240	COG1983	PspC domain protein
DN407_RS22245	COG1396	sequence-specific DNA binding
DN407_RS22250	COG0697	spore germination
DN407_RS22260	COG1959	2 iron, 2 sulfur cluster binding
DN407_RS22265	COG1668	transmembrane transport
DN407_RS22270	COG4152	abc transporter atp-binding protein
DN407_RS22275	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DN407_RS22280	COG1360	Flagellar Motor Protein
DN407_RS22285	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DN407_RS22290	COG1876	peptidase activity
DN407_RS22295	COG0824	Thioesterase
DN407_RS22300	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DN407_RS22305	COG1053	succinate dehydrogenase
DN407_RS22310	COG2009	succinate dehydrogenase
DN407_RS22315	COG1719	4-vinyl reductase, 4VR
DN407_RS22325	COG3118	belongs to the thioredoxin family
DN407_RS22330	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DN407_RS22335	COG2086	electron transfer activity
DN407_RS22340	COG1024	Enoyl-CoA hydratase
DN407_RS22345	COG1309	transcriptional regulator
DN407_RS22350	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_RS22375	COG2318	DinB family
DN407_RS22400	COG1131	(ABC) transporter
DN407_RS22405	COG2205	protein histidine kinase activity
DN407_RS22410	COG0745	RESPONSE REGULATOR receiver
DN407_RS22415	COG4895	conserved protein (DUF2196)
DN407_RS22420	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DN407_RS22430	COG4509	Sortase family
DN407_RS22435	COG1120	ATPase activity
DN407_RS22450	COG5386	Cell surface protein
DN407_RS22460	COG5386	Cell surface protein
DN407_RS22465	COG1114	Component of the transport system for branched-chain amino acids
DN407_RS22470	COG1187	pseudouridine synthase activity
DN407_RS22480	COG1796	DNA polymerase
DN407_RS22480	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DN407_RS22485	COG1286	toxin biosynthetic process
DN407_RS22530	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DN407_RS22540	COG1418	mRNA catabolic process
DN407_RS22560	COG2814	Major facilitator Superfamily
DN407_RS22565	COG1566	PFAM secretion protein HlyD family protein
DN407_RS22570	COG1309	transcriptional regulator
DN407_RS22575	COG1363	Peptidase, m42
DN407_RS22600	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DN407_RS22615	COG1484	DNA-dependent DNA replication
DN407_RS22620	COG3611	Membrane attachment protein
DN407_RS22630	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DN407_RS22635	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DN407_RS22645	COG1971	Probably functions as a manganese efflux pump
DN407_RS22655	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DN407_RS22655	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DN407_RS22660	COG5002	protein histidine kinase activity
DN407_RS22665	COG0745	RESPONSE REGULATOR receiver
DN407_RS22685	COG0538	isocitrate dehydrogenase activity
DN407_RS22690	COG0372	Belongs to the citrate synthase family
DN407_RS22705	COG0628	permease
DN407_RS22710	COG3030	protein affecting phage T7 exclusion by the F plasmid
DN407_RS22735	COG1725	Transcriptional regulator
DN407_RS22740	COG0281	malic enzyme
DN407_RS22745	COG0587	DNA-directed DNA polymerase activity
DN407_RS22760	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DN407_RS22775	COG4109	DRTGG domain
DN407_RS22785	COG0006	proline dipeptidase activity
DN407_RS22830	COG0662	Cupin 2, conserved barrel domain protein
DN407_RS22845	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_RS22850	COG0589	response to stress
DN407_RS22885	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS22910	COG0827	DNA restriction-modification system
DN407_RS22915	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DN407_RS22920	COG3874	Sporulation protein YtfJ
DN407_RS22935	COG1574	metal-dependent hydrolase with the TIM-barrel fold
DN407_RS22945	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DN407_RS22960	COG1104	cysteine desulfurase activity
DN407_RS22970	COG0583	DNA-binding transcription factor activity
DN407_RS22975	COG0697	spore germination
DN407_RS22980	COG1309	transcriptional regulator
DN407_RS22985	COG1956	GAF domain-containing protein
DN407_RS22990	COG0626	cystathionine gamma-synthase activity
DN407_RS23045	COG1595	DNA-templated transcription, initiation
DN407_RS23055	COG0110	maltose O-acetyltransferase activity
DN407_RS23060	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DN407_RS23065	COG0454	-acetyltransferase
DN407_RS23070	COG0517	IMP dehydrogenase activity
DN407_RS23075	COG0123	including yeast histone deacetylase and acetoin utilization protein
DN407_RS23090	COG0745	RESPONSE REGULATOR receiver
DN407_RS23100	COG0666	response to abiotic stimulus
DN407_RS23105	COG0745	RESPONSE REGULATOR receiver
DN407_RS23105	COG2972	Histidine kinase
DN407_RS23125	COG3279	Response regulator of the LytR AlgR family
DN407_RS23150	COG1609	Transcriptional regulator
DN407_RS23155	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DN407_RS23155	COG1605	Chorismate mutase
DN407_RS23160	COG4851	CamS sex pheromone cAM373 precursor
DN407_RS23165	COG3118	belongs to the thioredoxin family
DN407_RS23175	COG2309	aminopeptidase activity
DN407_RS23190	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS23205	COG1674	ftsk spoiiie
DN407_RS23210	COG1388	LysM domain
DN407_RS23210	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_RS23220	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DN407_RS23230	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DN407_RS23235	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
DN407_RS23240	COG1363	Peptidase, m42
DN407_RS23250	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS23265	COG0510	thiamine kinase activity
DN407_RS23270	COG1523	belongs to the glycosyl hydrolase 13 family
DN407_RS23280	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DN407_RS23285	COG1349	DNA-binding transcription factor activity
DN407_RS23290	COG1187	pseudouridine synthase activity
DN407_RS23295	COG2244	polysaccharide biosynthetic process
DN407_RS23300	COG2081	HI0933 family
DN407_RS23305	COG2814	Major facilitator Superfamily
DN407_RS23315	COG3832	glyoxalase III activity
DN407_RS23335	COG1329	Transcriptional regulator
DN407_RS23360	COG0314	molybdopterin synthase activity
DN407_RS23365	COG1763	Mo-molybdopterin cofactor biosynthetic process
DN407_RS23370	COG0303	'Molybdopterin
DN407_RS23380	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DN407_RS23385	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DN407_RS23410	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_RS23420	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DN407_RS23465	COG2814	Major facilitator Superfamily
DN407_RS23470	COG0475	glutathione-regulated potassium exporter activity
DN407_RS23475	COG0490	domain, Protein
DN407_RS23480	COG0582	viral genome integration into host DNA
DN407_RS23495	COG1136	(ABC) transporter
DN407_RS23515	COG1242	4 iron, 4 sulfur cluster binding
DN407_RS23520	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DN407_RS23530	COG1131	(ABC) transporter
DN407_RS23540	COG1794	racemase activity, acting on amino acids and derivatives
DN407_RS23560	COG2267	carboxylic ester hydrolase activity
DN407_RS23565	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DN407_RS23570	COG0671	phosphoesterase, PA-phosphatase related
DN407_RS23575	COG0438	transferase activity, transferring glycosyl groups
DN407_RS23600	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS23640	COG5002	protein histidine kinase activity
DN407_RS23645	COG3852	Histidine kinase
DN407_RS23650	COG2267	carboxylic ester hydrolase activity
DN407_RS23655	COG1368	sulfuric ester hydrolase activity
DN407_RS23680	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DN407_RS23685	COG1116	anion transmembrane transporter activity
DN407_RS23690	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DN407_RS23715	COG0494	nUDIX hydrolase
DN407_RS23750	COG1854	S-ribosylhomocysteine lyase activity
DN407_RS23760	COG0288	reversible hydration of carbon dioxide
DN407_RS23765	COG1271	oxidase subunit
DN407_RS23770	COG1294	oxidase, subunit
DN407_RS23785	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS23805	COG1842	Phage shock protein A
DN407_RS23835	COG5002	protein histidine kinase activity
DN407_RS23840	COG0745	RESPONSE REGULATOR receiver
DN407_RS23865	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
DN407_RS23870	COG1597	lipid kinase activity
DN407_RS23900	COG0586	Pfam SNARE associated Golgi protein
DN407_RS23910	COG0577	efflux transmembrane transporter activity
DN407_RS23915	COG1136	(ABC) transporter
DN407_RS23920	COG2207	Transcriptional regulator
DN407_RS23920	COG3708	Transcriptional regulator
DN407_RS23940	COG5658	integral membrane protein
DN407_RS23945	COG0640	Transcriptional regulator
DN407_RS23950	COG0745	RESPONSE REGULATOR receiver
DN407_RS23955	COG2205	protein histidine kinase activity
DN407_RS23960	COG0577	efflux transmembrane transporter activity
DN407_RS23965	COG0577	efflux transmembrane transporter activity
DN407_RS23970	COG1136	(ABC) transporter
DN407_RS23975	COG0577	efflux transmembrane transporter activity
DN407_RS24000	COG2188	Transcriptional regulator
DN407_RS24020	COG3964	amidohydrolase
DN407_RS24040	COG4948	Mandelate Racemase Muconate Lactonizing
DN407_RS24050	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DN407_RS24055	COG0596	Alpha beta hydrolase
DN407_RS24065	COG1169	isochorismate synthase
DN407_RS24070	COG1575	Belongs to the MenA family. Type 1 subfamily
DN407_RS24075	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DN407_RS24095	COG0058	SHG alpha-glucan phosphorylase activity
DN407_RS24105	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DN407_RS24230	COG0544	peptidyl-prolyl cis-trans isomerase activity
DN407_RS24265	COG1285	pathogenesis
DN407_RS24270	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DN407_RS24290	COG2155	Conserved Protein
DN407_RS24295	COG1098	S1 RNA binding domain
DN407_RS24300	COG0436	Aminotransferase
DN407_RS24305	COG1522	sequence-specific DNA binding
DN407_RS24310	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DN407_RS24315	COG2267	carboxylic ester hydrolase activity
DN407_RS24325	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DN407_RS24340	COG5018	Exonuclease
DN407_RS24345	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DN407_RS24365	COG2050	protein possibly involved in aromatic compounds catabolism
DN407_RS24375	COG1268	BioY protein
DN407_RS24380	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DN407_RS24385	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DN407_RS24400	COG3584	3D domain protein
DN407_RS24415	COG1252	NADH dehydrogenase
DN407_RS24430	COG3708	Transcriptional regulator
DN407_RS24445	COG1683	Conserved Protein
DN407_RS24460	COG0316	Belongs to the HesB IscA family
DN407_RS24475	COG1252	NADH dehydrogenase
DN407_RS24490	COG0390	transport system, permease component
DN407_RS24495	COG2824	Alkylphosphonate utilization operon protein PhnA
DN407_RS24520	COG4837	Protein of unknown function (DUF1462)
DN407_RS24525	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DN407_RS24535	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DN407_RS24540	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DN407_RS24560	COG1358	cellular component organization or biogenesis
DN407_RS24575	COG2249	NAD(P)H dehydrogenase (quinone) activity
DN407_RS24580	COG0647	UMP catabolic process
DN407_RS24590	COG2445	Protein of unknown function DUF86
DN407_RS24595	COG1494	fructose-1,6-bisphosphatase
DN407_RS24610	COG4470	Protein conserved in bacteria
DN407_RS24620	COG0789	Transcriptional regulator
DN407_RS24625	COG4377	Putative membrane peptidase family (DUF2324)
DN407_RS24650	COG0739	heme binding
DN407_RS24660	COG3377	Domain of unknown function (DUF1805)
DN407_RS24665	COG0737	Belongs to the 5'-nucleotidase family
DN407_RS24675	COG0719	Fe-S assembly protein
DN407_RS24680	COG0822	iron-sulfur transferase activity
DN407_RS24685	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DN407_RS24690	COG0719	Fe-S assembly protein
DN407_RS24695	COG0396	ATPase activity
DN407_RS24700	COG1464	Belongs to the NlpA lipoprotein family
DN407_RS24705	COG1464	Belongs to the NlpA lipoprotein family
DN407_RS24710	COG2011	ABC-type metal ion transport system permease component
DN407_RS24725	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DN407_RS24730	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DN407_RS24740	COG1393	Belongs to the ArsC family
DN407_RS24760	COG0039	L-malate dehydrogenase activity
DN407_RS24780	COG1309	transcriptional regulator
DN407_RS24785	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_RS24790	COG1960	acyl-CoA dehydrogenase activity
DN407_RS24795	COG0183	Belongs to the thiolase family
DN407_RS24800	COG1250	3-hydroxyacyl-CoA dehydrogenase
DN407_RS24800	COG1024	Enoyl-CoA hydratase
DN407_RS24810	COG1686	Belongs to the peptidase S11 family
DN407_RS24825	COG0011	TIGRFAM Protein of
DN407_RS24830	COG0840	transmembrane signaling receptor activity
DN407_RS24845	COG2814	Major facilitator Superfamily
DN407_RS24850	COG0531	amino acid
DN407_RS24870	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS24910	COG0586	Pfam SNARE associated Golgi protein
DN407_RS24920	COG1376	ErfK ybiS ycfS ynhG family protein
DN407_RS24925	COG0745	RESPONSE REGULATOR receiver
DN407_RS24930	COG5002	protein histidine kinase activity
DN407_RS24960	COG0840	transmembrane signaling receptor activity
DN407_RS24965	COG2151	metal-sulfur cluster biosynthetic enzyme
DN407_RS24970	COG3227	Zinc metalloprotease (Elastase)
DN407_RS24975	COG1741	Belongs to the pirin family
DN407_RS24990	COG0586	Pfam SNARE associated Golgi protein
DN407_RS24995	COG0475	glutathione-regulated potassium exporter activity
DN407_RS25000	COG0490	domain, Protein
DN407_RS25010	COG1115	amino acid carrier protein
DN407_RS25015	COG0783	Belongs to the Dps family
DN407_RS25030	COG1611	Belongs to the LOG family
DN407_RS25040	COG1528	Iron-storage protein
DN407_RS25045	COG2311	Membrane
DN407_RS25050	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_RS25055	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_RS25060	COG1115	amino acid carrier protein
DN407_RS25065	COG1115	amino acid carrier protein
DN407_RS25070	COG2910	NAD(P)H-binding
DN407_RS25085	COG0656	L-ascorbic acid biosynthetic process
DN407_RS25090	COG2814	Major facilitator Superfamily
DN407_RS25095	COG1733	regulation of RNA biosynthetic process
DN407_RS25105	COG1252	NADH dehydrogenase
DN407_RS25125	COG0840	transmembrane signaling receptor activity
DN407_RS25125	COG3290	protein histidine kinase activity
DN407_RS25160	COG0488	(ABC) transporter
DN407_RS25165	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS25210	COG0745	RESPONSE REGULATOR receiver
DN407_RS25230	COG0557	exoribonuclease II activity
DN407_RS25235	COG1647	Serine aminopeptidase, S33
DN407_RS25240	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DN407_RS25245	COG1346	cytolysis
DN407_RS25280	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DN407_RS25295	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DN407_RS25360	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DN407_RS25375	COG2323	membrane
DN407_RS25390	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DN407_RS25400	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DN407_RS25410	COG1051	belongs to the nudix hydrolase family
DN407_RS25420	COG0492	ferredoxin-NADP+ reductase activity
DN407_RS25425	COG0457	Tetratricopeptide repeat
DN407_RS25430	COG0110	maltose O-acetyltransferase activity
DN407_RS25450	COG1950	PFAM Membrane protein of
DN407_RS25460	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DN407_RS25465	COG0556	nucleotide-excision repair
DN407_RS25480	COG0789	Transcriptional regulator
DN407_RS25500	COG0583	DNA-binding transcription factor activity
DN407_RS25510	COG0655	NAD(P)H dehydrogenase (quinone) activity
DN407_RS25515	COG0488	(ABC) transporter
DN407_RS25525	COG1132	(ABC) transporter
DN407_RS25530	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DN407_RS25535	COG3409	Peptidoglycan-binding domain 1 protein
DN407_RS25535	COG0793	Belongs to the peptidase S41A family
DN407_RS25540	COG2177	Part of the ABC transporter FtsEX involved in
DN407_RS25545	COG2884	Cell division ATP-binding protein ftsE
DN407_RS25575	COG1131	(ABC) transporter
DN407_RS25605	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DN407_RS25610	COG1278	Cold shock
DN407_RS25615	COG1040	competence protein
DN407_RS25620	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DN407_RS25625	COG1388	LysM domain
DN407_RS25625	COG0791	NLP P60 protein
DN407_RS25630	COG1733	regulation of RNA biosynthetic process
DN407_RS25635	COG1307	EDD domain protein, DegV family
DN407_RS25640	COG1739	Uncharacterized protein family UPF0029
DN407_RS25645	COG1316	TRANSCRIPTIONal
DN407_RS25650	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DN407_RS25655	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DN407_RS25660	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DN407_RS25670	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DN407_RS25670	COG3933	PFAM sigma-54 factor interaction domain-containing protein
DN407_RS25690	COG1486	melibiose metabolic process
DN407_RS25695	COG1447	Phosphotransferase system cellobiose-specific component IIA
DN407_RS25700	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DN407_RS25710	COG1447	Phosphotransferase system cellobiose-specific component IIA
DN407_RS25720	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DN407_RS25725	COG1301	dicarboxylic acid transport
DN407_RS25740	COG1511	domain protein
DN407_RS25745	COG0583	DNA-binding transcription factor activity
DN407_RS25750	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DN407_RS25755	COG1271	oxidase subunit
DN407_RS25760	COG1294	oxidase, subunit
DN407_RS25765	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DN407_RS25775	COG1620	l-lactate permease
DN407_RS25785	COG2389	metal-binding protein
DN407_RS25800	COG1368	sulfuric ester hydrolase activity
DN407_RS25815	COG1388	LysM domain
DN407_RS25815	COG0791	NLP P60 protein
DN407_RS25820	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_RS25830	COG1215	transferase activity, transferring glycosyl groups
DN407_RS25835	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DN407_RS25845	COG3584	3D domain protein
DN407_RS25845	COG1388	LysM domain
DN407_RS25870	COG4715	Zinc finger, swim domain protein
DN407_RS25875	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DN407_RS25915	COG0577	efflux transmembrane transporter activity
DN407_RS25920	COG1136	(ABC) transporter
DN407_RS25945	COG5002	protein histidine kinase activity
DN407_RS25950	COG0745	RESPONSE REGULATOR receiver
DN407_RS25955	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DN407_RS25960	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DN407_RS25980	COG0438	transferase activity, transferring glycosyl groups
DN407_RS26005	COG0297	glycogen (starch) synthase activity
DN407_RS26005	COG0438	transferase activity, transferring glycosyl groups
DN407_RS26020	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DN407_RS26025	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DN407_RS26030	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DN407_RS26035	COG4464	protein tyrosine phosphatase activity
DN407_RS26040	COG0489	protein tyrosine kinase activity
DN407_RS26045	COG3944	biosynthesis protein
DN407_RS26050	COG0489	protein tyrosine kinase activity
DN407_RS26065	COG1609	Transcriptional regulator
DN407_RS26075	COG0739	heme binding
DN407_RS26090	COG3279	Response regulator of the LytR AlgR family
DN407_RS26095	COG2385	sporulation resulting in formation of a cellular spore
DN407_RS26110	COG4836	Membrane
DN407_RS26115	COG1007	ATP synthesis coupled electron transport
DN407_RS26120	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DN407_RS26125	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DN407_RS26135	COG0839	Belongs to the complex I subunit 6 family
DN407_RS26155	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DN407_RS26170	COG5001	Diguanylate cyclase
DN407_RS26170	COG3300	MHYT domain
DN407_RS26220	COG0356	it plays a direct role in the translocation of protons across the membrane
DN407_RS26255	COG0698	ribose 5-phosphate isomerase
DN407_RS26270	COG2259	Doxx family
DN407_RS26275	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DN407_RS26290	COG0009	L-threonylcarbamoyladenylate synthase
DN407_RS26325	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DN407_RS26330	COG1494	fructose-1,6-bisphosphatase
DN407_RS26350	COG4821	SIS domain
DN407_RS26360	COG3343	RNA polymerase activity
DN407_RS26370	COG1960	acyl-CoA dehydrogenase activity
DN407_RS26375	COG1960	acyl-CoA dehydrogenase activity
DN407_RS26380	COG1250	3-hydroxyacyl-CoA dehydrogenase
DN407_RS26385	COG0183	Belongs to the thiolase family
DN407_RS26390	COG0247	lactate metabolic process
DN407_RS26390	COG2181	nitrate reductase activity
DN407_RS26395	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DN407_RS26405	COG5001	Diguanylate cyclase
DN407_RS26405	COG3300	MHYT domain
DN407_RS26420	COG3227	Zinc metalloprotease (Elastase)
DN407_RS26425	COG2197	response regulator
DN407_RS26430	COG4585	Histidine kinase
DN407_RS26435	COG0842	Transport permease protein
DN407_RS26440	COG1131	(ABC) transporter
DN407_RS26445	COG0024	Methionine aminopeptidase
DN407_RS26455	COG2234	aminopeptidase activity
DN407_RS26475	COG1595	DNA-templated transcription, initiation
DN407_RS26485	COG4506	Protein conserved in bacteria
DN407_RS26490	COG1619	proteins homologs of microcin C7 resistance protein MccF
DN407_RS26515	COG2814	Major facilitator Superfamily
DN407_RS26520	COG0789	Transcriptional regulator
DN407_RS26525	COG0584	glycerophosphoryl diester phosphodiesterase
DN407_RS26530	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DN407_RS26540	COG1994	Peptidase M50
DN407_RS26550	COG1078	dGTPase activity
DN407_RS26555	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_RS26560	COG1120	ATPase activity
DN407_RS26565	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_RS26570	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_RS26590	COG0280	phosphate acetyltransferase
DN407_RS26605	COG3773	Cell wall hydrolase
DN407_RS26615	COG2363	Small membrane protein
DN407_RS26625	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DN407_RS26630	COG2233	PERMEase
DN407_RS26635	COG0561	phosphatase activity
DN407_RS26640	COG2814	Major facilitator Superfamily
DN407_RS26650	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DN407_RS26655	COG1131	(ABC) transporter
DN407_RS26660	COG2755	lipolytic protein G-D-S-L family
DN407_RS26665	COG1609	Transcriptional regulator
DN407_RS26675	COG0460	homoserine dehydrogenase
DN407_RS26685	COG2873	o-acetylhomoserine
DN407_RS26695	COG1011	Hydrolase
DN407_RS26700	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DN407_RS26710	COG2197	response regulator
DN407_RS26715	COG4585	Histidine kinase
DN407_RS26715	COG2203	Gaf domain
DN407_RS26720	COG0351	phosphomethylpyrimidine kinase
DN407_RS26725	COG3706	GGDEF domain
DN407_RS26730	COG2879	small protein
DN407_RS26735	COG1966	Carbon starvation protein
DN407_RS26740	COG3279	Response regulator of the LytR AlgR family
DN407_RS26745	COG0477	Major facilitator Superfamily
DN407_RS26760	COG0438	transferase activity, transferring glycosyl groups
DN407_RS26775	COG0840	transmembrane signaling receptor activity
DN407_RS26785	COG1607	acyl-coa hydrolase
DN407_RS26790	COG1216	Glycosyl transferase, family 2
DN407_RS26805	COG1216	Glycosyl transferase, family 2
DN407_RS26815	COG4485	Bacterial membrane protein, YfhO
DN407_RS26820	COG0463	Glycosyl transferase, family 2
DN407_RS26825	COG0488	(ABC) transporter
DN407_RS26830	COG1309	transcriptional regulator
DN407_RS26835	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DN407_RS26840	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DN407_RS26840	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DN407_RS26845	COG0628	permease
DN407_RS26865	COG3275	phosphorelay sensor kinase activity
DN407_RS26870	COG2814	Major facilitator Superfamily
DN407_RS26875	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DN407_RS26880	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
DN407_RS26910	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DN407_RS26915	COG1272	protein, Hemolysin III
DN407_RS26950	COG5002	protein histidine kinase activity
DN407_RS26965	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DN407_RS26970	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DN407_RS26975	COG4853	Protein conserved in bacteria
DN407_RS26985	COG5002	protein histidine kinase activity
DN407_RS26990	COG0745	RESPONSE REGULATOR receiver
DN407_RS27020	COG0305	Participates in initiation and elongation during chromosome replication
DN407_RS27030	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
DN407_RS27035	COG4241	membrane
DN407_RS27055	COG0012	GTP binding
DN407_RS27060	COG4481	Protein conserved in bacteria
DN407_RS27065	COG0668	transmembrane transport
DN407_RS27075	COG1475	DNA binding
DN407_RS27080	COG1192	Involved in chromosome partitioning
DN407_RS27105	COG1847	R3H domain protein
DN407_RS27120	COG0230	Belongs to the bacterial ribosomal protein bL34 family
DN407_RS27190	COG0741	lytic transglycosylase activity
DN407_RS27195	COG5002	protein histidine kinase activity
DN407_RS27200	COG0745	RESPONSE REGULATOR receiver
DN407_RS27210	COG2770	Histidine kinase
DN407_RS27210	COG3437	response regulator, receiver
DN407_RS27590	COG1725	Transcriptional regulator
DN407_RS27595	COG1131	(ABC) transporter
DN407_RS27610	COG1802	Transcriptional regulator
DN407_RS27615	COG0697	spore germination
DN407_RS27635	COG1278	Cold shock
DN407_RS27655	COG1329	Transcriptional regulator
DN407_RS27680	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DN407_RS27695	COG0406	alpha-ribazole phosphatase activity
DN407_RS27705	COG1846	Transcriptional regulator
DN407_RS27710	COG1335	isochorismatase
DN407_RS27715	COG0477	Major facilitator Superfamily
DN407_RS27725	COG0789	Transcriptional regulator
DN407_RS27735	COG2311	Membrane
DN407_RS27800	COG0657	acetylesterase activity
DN407_RS27805	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS27840	COG3409	Peptidoglycan-binding domain 1 protein
DN407_RS27840	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_RS27880	COG0697	spore germination
DN407_RS27890	COG1802	Transcriptional regulator
DN407_RS27895	COG0697	spore germination
DN407_RS27910	COG2366	antibiotic biosynthetic process
DN407_RS27950	COG2423	ornithine cyclodeaminase activity
DN407_RS27975	COG3104	oligopeptide transport
DN407_RS27985	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_RS28040	COG1136	(ABC) transporter
DN407_RS28045	COG0577	efflux transmembrane transporter activity
DN407_RS28050	COG2002	toxin-antitoxin pair type II binding
DN407_RS28060	COG1923	regulation of RNA biosynthetic process
DN407_RS28075	COG0840	transmembrane signaling receptor activity
DN407_RS28095	COG2814	Major facilitator Superfamily
DN407_RS28100	COG1309	transcriptional regulator
DN407_RS28140	COG2207	Transcriptional regulator
DN407_RS28200	COG0640	Transcriptional regulator
DN407_RS28225	COG2318	DinB family
DN407_RS28260	COG0534	Mate efflux family protein
DN407_RS28265	COG0723	plastoquinol--plastocyanin reductase activity
DN407_RS28265	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DN407_RS28275	COG3961	Belongs to the TPP enzyme family
DN407_RS28305	COG0109	protoheme IX farnesyltransferase activity
DN407_RS28330	COG0531	amino acid
DN407_RS28345	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DN407_RS28390	COG0457	Tetratricopeptide repeat
DN407_RS28415	COG0584	glycerophosphoryl diester phosphodiesterase
DN407_RS28420	COG1131	(ABC) transporter
DN407_RS28495	COG1136	(ABC) transporter
DN407_RS28505	COG1309	transcriptional regulator
DN407_RS28530	COG4974	Belongs to the 'phage' integrase family
DN407_RS28545	COG1073	alpha beta
DN407_RS28575	COG2259	Doxx family
DN407_RS28605	COG2814	Major facilitator Superfamily
DN407_RS28625	COG0577	efflux transmembrane transporter activity
DN407_RS28630	COG1136	(ABC) transporter
DN407_RS28640	COG0745	RESPONSE REGULATOR receiver
DN407_RS28645	COG3850	Histidine kinase
DN407_RS28645	COG5002	protein histidine kinase activity
DN407_RS28675	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_RS28675	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DN407_RS28770	COG3773	Cell wall hydrolase
DN407_RS28805	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DN407_RS28810	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DN407_RS28815	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_RS28820	COG0438	transferase activity, transferring glycosyl groups
DN407_RS28840	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DN407_RS28845	COG0438	transferase activity, transferring glycosyl groups
DN407_RS28850	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DN407_RS29040	COG2814	Major facilitator Superfamily
DN407_RS29050	COG1960	acyl-CoA dehydrogenase activity
DN407_RS29060	COG0367	asparagine synthase
DN407_RS29140	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DN407_RS29155	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DN407_RS29195	COG1846	Transcriptional regulator
DN407_RS29220	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DN407_RS29245	COG0582	viral genome integration into host DNA
DN407_RS29290	COG1136	(ABC) transporter
DN407_RS29335	COG0457	Tetratricopeptide repeat
DN407_RS29390	COG1216	Glycosyl transferase, family 2
DN407_RS29395	COG1024	Enoyl-CoA hydratase
DN407_RS29410	COG1396	sequence-specific DNA binding
DN407_RS29465	COG1396	sequence-specific DNA binding
DN407_RS29475	COG2815	serine threonine protein kinase
DN407_RS29475	COG0515	serine threonine protein kinase
DN407_RS29525	COG0582	viral genome integration into host DNA
DN407_RS29555	COG0457	Tetratricopeptide repeat
DN407_RS29580	COG0457	Tetratricopeptide repeat
DN407_RS29610	COG1063	alcohol dehydrogenase
DN407_RS29620	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DN407_RS29635	COG0531	amino acid
DN407_RS29645	COG0697	spore germination
DN407_RS29650	COG0814	amino acid
DN407_RS29675	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_RS29680	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DN407_RS29685	COG1522	sequence-specific DNA binding
DN407_RS29690	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DN407_RS29745	COG0367	asparagine synthase
DN407_RS29750	COG1309	transcriptional regulator
DN407_RS29920	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_RS29935	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_RS29935	COG3409	Peptidoglycan-binding domain 1 protein
DN407_RS29935	COG1388	LysM domain
DN407_RS29940	COG0739	heme binding
DN407_RS29975	COG5634	Uncharacterized conserved protein (DUF2278)
DN407_RS30000	COG0463	Glycosyl transferase, family 2
DN407_RS30035	COG0542	response to heat
DN407_RS30050	COG0457	Tetratricopeptide repeat
DN407_RS30145	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_RS30155	COG2801	Transposase and inactivated derivatives
DN407_RS30250	COG1136	(ABC) transporter
DN407_RS30340	COG1136	(ABC) transporter
DN407_RS30355	COG3048	D-serine ammonia-lyase activity
DN407_RS30370	COG1131	(ABC) transporter
DN407_RS30410	COG0531	amino acid
DN407_RS30420	COG0351	phosphomethylpyrimidine kinase
DN407_RS30425	COG1757	Na H antiporter
DN407_RS30430	COG4496	protein, YerC YecD
DN407_RS30450	COG3344	reverse transcriptase
DN407_RS30505	COG3344	reverse transcriptase
DN407_RS30615	COG0772	Belongs to the SEDS family
DN407_RS30620	COG2239	Acts as a magnesium transporter
DN407_RS30655	COG0772	Belongs to the SEDS family
DN407_RS30675	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DN407_RS30720	COG0745	RESPONSE REGULATOR receiver
DN407_RS30725	COG5002	protein histidine kinase activity
DN407_RS30750	COG0531	amino acid
DN407_RS30765	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_RS30790	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_RS30790	COG3409	Peptidoglycan-binding domain 1 protein
DN407_RS30810	COG0457	Tetratricopeptide repeat
DN407_RS30850	COG0501	Belongs to the peptidase M48B family
DN407_RS30890	COG0531	amino acid
DN407_RS30905	COG0531	amino acid
DN407_RS30955	COG4824	toxin secretion phage lysis holin
DN407_RS30965	COG2239	Acts as a magnesium transporter
DN407_RS30990	COG1914	H( )-stimulated, divalent metal cation uptake system
DN407_RS30995	COG0745	RESPONSE REGULATOR receiver
DN407_RS31035	COG2801	Transposase and inactivated derivatives
DN407_RS31065	COG3344	reverse transcriptase
DN407_RS31145	COG0523	cobalamin synthesis protein
DN407_RS31160	COG0803	Belongs to the bacterial solute-binding protein 9 family
DN407_RS31165	COG1121	(ABC) transporter
DN407_RS31170	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DN407_RS31180	COG2801	Transposase and inactivated derivatives
DN407_RS31185	COG2801	Transposase and inactivated derivatives
DN407_RS31200	COG3757	hydrolase, family 25
DN407_RS31200	COG3409	Peptidoglycan-binding domain 1 protein
DN407_RS31215	COG1686	Belongs to the peptidase S11 family
DN407_RS31225	COG2002	toxin-antitoxin pair type II binding
DN407_RS31245	COG1842	Phage shock protein A
DN407_RS31455	COG3177	Filamentation induced by cAMP protein fic