locus-tag	class	description
AUL54_RS00005	COG0587	DNA-directed DNA polymerase activity
AUL54_RS00010	COG3584	3D domain protein
AUL54_RS00015	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AUL54_RS00105	COG1780	Probably involved in ribonucleotide reductase function
AUL54_RS00110	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AUL54_RS00110	COG1372	Participates in initiation and elongation during chromosome replication
AUL54_RS00120	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AUL54_RS00130	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AUL54_RS00135	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AUL54_RS00145	COG0756	dUTP diphosphatase activity
AUL54_RS00165	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AUL54_RS00205	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AUL54_RS00250	COG3331	DNA recombination
AUL54_RS00255	COG2233	PERMEase
AUL54_RS00265	COG1335	isochorismatase
AUL54_RS00290	COG3424	synthase
AUL54_RS00295	COG1755	Isoprenylcysteine carboxyl methyltransferase
AUL54_RS00300	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AUL54_RS00310	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AUL54_RS00320	COG0328	RNA-DNA hybrid ribonuclease activity
AUL54_RS00325	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AUL54_RS00330	COG0328	RNA-DNA hybrid ribonuclease activity
AUL54_RS00350	COG1278	Cold shock
AUL54_RS00355	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AUL54_RS00365	COG0386	Belongs to the glutathione peroxidase family
AUL54_RS00375	COG1413	lyase activity
AUL54_RS00390	COG2521	methyltransferase
AUL54_RS00390	COG2136	Putative SAM-dependent methyltransferase
AUL54_RS00405	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AUL54_RS00410	COG0204	Acyl-transferase
AUL54_RS00415	COG1272	protein, Hemolysin III
AUL54_RS00420	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AUL54_RS00425	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AUL54_RS00435	COG1999	signal sequence binding
AUL54_RS00440	COG2755	lipolytic protein G-D-S-L family
AUL54_RS00445	COG4698	Protein conserved in bacteria
AUL54_RS00450	COG1846	Transcriptional regulator
AUL54_RS00470	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AUL54_RS00495	COG4282	regulation of fungal-type cell wall biogenesis
AUL54_RS00500	COG5444	nuclease activity
AUL54_RS00525	COG3391	amine dehydrogenase activity
AUL54_RS00535	COG0457	Tetratricopeptide repeat
AUL54_RS00570	COG0477	Major facilitator Superfamily
AUL54_RS00575	COG1086	Polysaccharide biosynthesis protein
AUL54_RS00585	COG4641	Protein conserved in bacteria
AUL54_RS00600	COG0463	Glycosyl transferase, family 2
AUL54_RS00605	COG0456	acetyltransferase
AUL54_RS00615	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AUL54_RS00620	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AUL54_RS00625	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AUL54_RS00630	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AUL54_RS00635	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AUL54_RS00640	COG0456	acetyltransferase
AUL54_RS00645	COG1509	lysine 2,3-aminomutase activity
AUL54_RS00665	COG0671	phosphoesterase, PA-phosphatase related
AUL54_RS00680	COG1876	peptidase activity
AUL54_RS00690	COG2226	methyltransferase
AUL54_RS00695	COG0793	Belongs to the peptidase S41A family
AUL54_RS00695	COG3409	Peptidoglycan-binding domain 1 protein
AUL54_RS00700	COG2188	Transcriptional regulator
AUL54_RS00705	COG2723	6-phospho-beta-galactosidase activity
AUL54_RS00715	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AUL54_RS00725	COG0346	lactoylglutathione lyase activity
AUL54_RS00730	COG0400	carboxylic ester hydrolase activity
AUL54_RS00735	COG0778	Nitroreductase
AUL54_RS00740	COG1733	regulation of RNA biosynthetic process
AUL54_RS00765	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AUL54_RS00770	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AUL54_RS00775	COG1366	Belongs to the anti-sigma-factor antagonist family
AUL54_RS00780	COG0534	Mate efflux family protein
AUL54_RS00785	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AUL54_RS00790	COG1819	glycosyl
AUL54_RS00795	COG1388	LysM domain
AUL54_RS00795	COG0791	NLP P60 protein
AUL54_RS00800	COG2032	superoxide dismutase activity
AUL54_RS00805	COG0714	Associated with various cellular activities
AUL54_RS00810	COG4548	von Willebrand factor, type A
AUL54_RS00820	COG0508	dehydrogenase complex catalyzes the overall conversion of
AUL54_RS00825	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AUL54_RS00830	COG0385	Bile acid
AUL54_RS00835	COG0733	neurotransmitter:sodium symporter activity
AUL54_RS00840	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AUL54_RS00845	COG1657	PFAM Prenyltransferase squalene oxidase
AUL54_RS00850	COG1012	belongs to the aldehyde dehydrogenase family
AUL54_RS00875	COG0071	Belongs to the small heat shock protein (HSP20) family
AUL54_RS00890	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AUL54_RS00895	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AUL54_RS00905	COG0514	ATP-dependent DNA helicase (RecQ)
AUL54_RS00910	COG1388	LysM domain
AUL54_RS00910	COG3584	3D domain protein
AUL54_RS00920	COG1619	proteins homologs of microcin C7 resistance protein MccF
AUL54_RS00935	COG2322	membrane
AUL54_RS00940	COG0741	lytic transglycosylase activity
AUL54_RS00945	COG0640	Transcriptional regulator
AUL54_RS00955	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AUL54_RS00960	COG1309	transcriptional regulator
AUL54_RS00965	COG0662	Cupin 2, conserved barrel domain protein
AUL54_RS00965	COG2207	Transcriptional regulator
AUL54_RS00970	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUL54_RS01095	COG3953	SLT domain
AUL54_RS01095	COG5280	Phage tail tape measure protein TP901
AUL54_RS01110	COG5434	Belongs to the glycosyl hydrolase 28 family
AUL54_RS01130	COG4824	toxin secretion phage lysis holin
AUL54_RS01135	COG5632	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS01185	COG4974	Belongs to the 'phage' integrase family
AUL54_RS01190	COG5444	nuclease activity
AUL54_RS01220	COG0243	molybdopterin cofactor binding
AUL54_RS01225	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AUL54_RS01235	COG2814	Major facilitator Superfamily
AUL54_RS01245	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AUL54_RS01250	COG0300	oxidoreductase activity
AUL54_RS01265	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AUL54_RS01270	COG0583	DNA-binding transcription factor activity
AUL54_RS01275	COG0069	glutamate synthase activity
AUL54_RS01275	COG0070	glutamate synthase
AUL54_RS01275	COG0067	glutamate synthase
AUL54_RS01280	COG0493	'glutamate synthase
AUL54_RS01290	COG0604	alcohol dehydrogenase
AUL54_RS01300	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AUL54_RS01305	COG0640	Transcriptional regulator
AUL54_RS01310	COG2814	Major facilitator Superfamily
AUL54_RS01315	COG0405	Gamma-glutamyltransferase
AUL54_RS01320	COG0166	Belongs to the GPI family
AUL54_RS01325	COG0582	viral genome integration into host DNA
AUL54_RS01340	COG0534	Mate efflux family protein
AUL54_RS01345	COG2017	converts alpha-aldose to the beta-anomer
AUL54_RS01350	COG2027	D-alanyl-D-alanine carboxypeptidase
AUL54_RS01355	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS01360	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS01365	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS01370	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS01375	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AUL54_RS01375	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS01385	COG1649	PFAM Uncharacterised BCR, COG1649
AUL54_RS01390	COG1960	acyl-CoA dehydrogenase activity
AUL54_RS01395	COG0318	PFAM AMP-dependent synthetase and ligase
AUL54_RS01400	COG0439	Biotin carboxylase
AUL54_RS01405	COG0511	ligase activity, forming carbon-carbon bonds
AUL54_RS01410	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AUL54_RS01415	COG1024	Enoyl-CoA hydratase
AUL54_RS01420	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AUL54_RS01425	COG0586	Pfam SNARE associated Golgi protein
AUL54_RS01430	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AUL54_RS01435	COG2246	polysaccharide biosynthetic process
AUL54_RS01445	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AUL54_RS01465	COG2124	cytochrome p450
AUL54_RS01470	COG2610	gluconate transmembrane transporter activity
AUL54_RS01475	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AUL54_RS01480	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AUL54_RS01485	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS01510	COG3507	Belongs to the glycosyl hydrolase 43 family
AUL54_RS01550	COG1115	amino acid carrier protein
AUL54_RS01560	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AUL54_RS01565	COG0187	DNA topoisomerase II activity
AUL54_RS01570	COG1832	CoA-binding protein
AUL54_RS01580	COG4841	protein insertion into membrane
AUL54_RS01590	COG0824	Thioesterase
AUL54_RS01605	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AUL54_RS01610	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AUL54_RS01625	COG0071	Belongs to the small heat shock protein (HSP20) family
AUL54_RS01635	COG4846	Membrane protein involved in cytochrome C biogenesis
AUL54_RS01640	COG2201	protein-glutamate methylesterase activity
AUL54_RS01645	COG0785	Cytochrome C biogenesis protein
AUL54_RS01665	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AUL54_RS01675	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AUL54_RS01710	COG4195	phage-related replication protein
AUL54_RS01715	COG0756	dUTP diphosphatase activity
AUL54_RS01720	COG5434	Belongs to the glycosyl hydrolase 28 family
AUL54_RS01730	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AUL54_RS01735	COG3397	chitin binding
AUL54_RS01755	COG0456	acetyltransferase
AUL54_RS01775	COG4451	ribulose bisphosphate carboxylase, small
AUL54_RS01775	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AUL54_RS01780	COG1064	alcohol dehydrogenase
AUL54_RS01785	COG2318	DinB family
AUL54_RS01790	COG2378	regulation of single-species biofilm formation
AUL54_RS01805	COG0574	Belongs to the PEP-utilizing enzyme family
AUL54_RS01805	COG3848	Pyruvate phosphate dikinase
AUL54_RS01810	COG1070	Carbohydrate kinase
AUL54_RS01825	COG3507	Belongs to the glycosyl hydrolase 43 family
AUL54_RS01830	COG2211	Major facilitator Superfamily
AUL54_RS01845	COG5444	nuclease activity
AUL54_RS01860	COG0174	glutamine synthetase
AUL54_RS01865	COG0789	Transcriptional regulator
AUL54_RS01870	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
AUL54_RS01875	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AUL54_RS01880	COG0464	growth
AUL54_RS01890	COG0860	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS01895	COG4112	unkown
AUL54_RS01900	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AUL54_RS01905	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AUL54_RS01945	COG2076	Multidrug Resistance protein
AUL54_RS01955	COG1764	response to oxidative stress
AUL54_RS01960	COG4195	phage-related replication protein
AUL54_RS01970	COG1404	Belongs to the peptidase S8 family
AUL54_RS01980	COG3619	membrane
AUL54_RS01985	COG3209	COG3209 Rhs family protein
AUL54_RS01990	COG2124	cytochrome p450
AUL54_RS01995	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AUL54_RS01995	COG3321	synthase
AUL54_RS01995	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AUL54_RS01995	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS02000	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS02000	COG4221	oxidoreductase activity
AUL54_RS02000	COG3321	synthase
AUL54_RS02000	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS02005	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS02005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS02005	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS02005	COG3321	synthase
AUL54_RS02005	COG3321	synthase
AUL54_RS02005	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS02005	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AUL54_RS02005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS02005	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS02005	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AUL54_RS02010	COG3321	synthase
AUL54_RS02010	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS02010	COG4221	oxidoreductase activity
AUL54_RS02010	COG0300	oxidoreductase activity
AUL54_RS02015	COG3321	synthase
AUL54_RS02015	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS02015	COG0300	oxidoreductase activity
AUL54_RS02015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS02015	COG0318	PFAM AMP-dependent synthetase and ligase
AUL54_RS02020	COG1024	Enoyl-CoA hydratase
AUL54_RS02025	COG1024	Enoyl-CoA hydratase
AUL54_RS02030	COG3425	synthase
AUL54_RS02035	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS02065	COG5444	nuclease activity
AUL54_RS02090	COG0582	viral genome integration into host DNA
AUL54_RS02110	COG4550	Control of competence regulator ComK, YlbF/YmcA
AUL54_RS02130	COG2359	stage V sporulation protein S
AUL54_RS02135	COG1692	metallophosphoesterase
AUL54_RS02145	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AUL54_RS02160	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AUL54_RS02165	COG1426	Protein conserved in bacteria
AUL54_RS02180	COG0300	oxidoreductase activity
AUL54_RS02185	COG0612	Peptidase, M16
AUL54_RS02190	COG0612	Peptidase, M16
AUL54_RS02195	COG1033	growth of symbiont in host cell
AUL54_RS02195	COG2409	Drug exporters of the RND superfamily
AUL54_RS02200	COG1846	Transcriptional regulator
AUL54_RS02205	COG2814	Major facilitator Superfamily
AUL54_RS02210	COG2188	Transcriptional regulator
AUL54_RS02215	COG1674	ftsk spoiiie
AUL54_RS02215	COG4980	gas vesicle protein
AUL54_RS02225	COG0740	serine-type endopeptidase activity
AUL54_RS02230	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AUL54_RS02240	COG0527	aspartate kinase activity
AUL54_RS02245	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AUL54_RS02250	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AUL54_RS02255	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AUL54_RS02260	COG1873	PFAM PRC-barrel domain
AUL54_RS02265	COG0612	Peptidase, M16
AUL54_RS02270	COG0726	polysaccharide deacetylase
AUL54_RS02285	COG0196	riboflavin kinase activity
AUL54_RS02300	COG1550	Protein conserved in bacteria
AUL54_RS02310	COG1358	cellular component organization or biogenesis
AUL54_RS02315	COG2740	Nucleic-acid-binding protein implicated in transcription termination
AUL54_RS02320	COG0195	Participates in both transcription termination and antitermination
AUL54_RS02330	COG2176	DNA-directed DNA polymerase activity
AUL54_RS02340	COG0750	zinc metalloprotease
AUL54_RS02350	COG4589	Belongs to the CDS family
AUL54_RS02355	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AUL54_RS02385	COG1191	sigma factor activity
AUL54_RS02395	COG1776	CheC inhibitor of MCP methylation
AUL54_RS02400	COG0835	chemotaxis
AUL54_RS02405	COG2198	Histidine kinase
AUL54_RS02405	COG0643	Histidine kinase
AUL54_RS02410	COG2201	protein-glutamate methylesterase activity
AUL54_RS02415	COG0455	bacterial-type flagellum organization
AUL54_RS02420	COG1419	protein localization to endoplasmic reticulum
AUL54_RS02425	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AUL54_RS02430	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AUL54_RS02435	COG1684	flagellar biosynthetic protein fliR
AUL54_RS02440	COG1987	bacterial-type flagellum assembly
AUL54_RS02445	COG1338	Plays a role in the flagellum-specific transport system
AUL54_RS02450	COG3190	flagellar
AUL54_RS02455	COG2201	protein-glutamate methylesterase activity
AUL54_RS02460	COG1776	CheC inhibitor of MCP methylation
AUL54_RS02460	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AUL54_RS02465	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AUL54_RS02470	COG1580	Controls the rotational direction of flagella during chemotaxis
AUL54_RS02475	COG1582	Flagellar protein (FlbD)
AUL54_RS02480	COG4786	Flagellar basal body rod
AUL54_RS02485	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AUL54_RS02490	COG3144	bacterial-type flagellum assembly
AUL54_RS02495	COG3334	PFAM MgtE intracellular
AUL54_RS02500	COG2882	bacterial-type flagellum organization
AUL54_RS02505	COG1157	protein secretion by the type III secretion system
AUL54_RS02510	COG1317	bacterial-type flagellum organization
AUL54_RS02515	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AUL54_RS02520	COG1766	The M ring may be actively involved in energy transduction
AUL54_RS02525	COG1677	Flagellar hook-basal body complex protein FliE
AUL54_RS02530	COG1558	bacterial-type flagellum-dependent cell motility
AUL54_RS02535	COG1815	bacterial-type flagellum-dependent cell motility
AUL54_RS02555	COG4974	Belongs to the 'phage' integrase family
AUL54_RS02565	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AUL54_RS02570	COG0758	DNA mediated transformation
AUL54_RS02575	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AUL54_RS02585	COG2257	FlhB HrpN YscU SpaS Family
AUL54_RS02600	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AUL54_RS02625	COG1837	Belongs to the UPF0109 family
AUL54_RS02635	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AUL54_RS02650	COG0552	protein localization to endoplasmic reticulum
AUL54_RS02655	COG1196	nuclear chromosome segregation
AUL54_RS02670	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS02675	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AUL54_RS02690	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AUL54_RS02695	COG1760	l-serine dehydratase
AUL54_RS02700	COG1760	l-serine dehydratase
AUL54_RS02705	COG1461	Dihydroxyacetone kinase
AUL54_RS02710	COG1302	Protein conserved in bacteria
AUL54_RS02725	COG1564	THIamine pyrophosphokinase
AUL54_RS02730	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AUL54_RS02740	COG0515	serine threonine protein kinase
AUL54_RS02740	COG2815	serine threonine protein kinase
AUL54_RS02745	COG0631	protein serine/threonine phosphatase activity
AUL54_RS02755	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AUL54_RS02755	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AUL54_RS02765	COG0242	peptide deformylase activity
AUL54_RS02770	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AUL54_RS02775	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AUL54_RS02785	COG0194	GDP metabolic process
AUL54_RS02795	COG1561	YicC-like family, N-terminal region
AUL54_RS02800	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AUL54_RS02815	COG1648	precorrin-2 dehydrogenase activity
AUL54_RS02820	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
AUL54_RS02825	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AUL54_RS02840	COG0306	phosphate transporter
AUL54_RS02850	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AUL54_RS02855	COG0284	orotidine-5'-phosphate decarboxylase activity
AUL54_RS02870	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AUL54_RS02875	COG0505	Belongs to the CarA family
AUL54_RS02880	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AUL54_RS02890	COG2233	PERMEase
AUL54_RS02900	COG0564	pseudouridine synthase activity
AUL54_RS02910	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AUL54_RS02915	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AUL54_RS02920	COG3599	regulation of cell shape
AUL54_RS02925	COG2302	S4 RNA-binding domain
AUL54_RS02930	COG0762	integral membrane protein
AUL54_RS02940	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AUL54_RS02945	COG1496	oxidoreductase activity
AUL54_RS02950	COG1873	PFAM PRC-barrel domain
AUL54_RS02955	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AUL54_RS02960	COG1119	ATPase activity
AUL54_RS02965	COG1191	sigma factor activity
AUL54_RS02970	COG1191	sigma factor activity
AUL54_RS02980	COG4412	M6 family metalloprotease domain protein
AUL54_RS02980	COG1404	Belongs to the peptidase S8 family
AUL54_RS02985	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AUL54_RS02990	COG0849	cell division
AUL54_RS02995	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AUL54_RS03010	COG0772	Belongs to the SEDS family
AUL54_RS03030	COG0768	penicillin binding
AUL54_RS03035	COG0768	penicillin binding
AUL54_RS03040	COG4839	cell division protein FtsL
AUL54_RS03060	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AUL54_RS03075	COG1399	metal-binding, possibly nucleic acid-binding protein
AUL54_RS03085	COG3480	Lon protease (S16) C-terminal proteolytic domain
AUL54_RS03090	COG1752	Esterase of the alpha-beta hydrolase superfamily
AUL54_RS03095	COG3314	Sporulation integral membrane protein YlbJ
AUL54_RS03105	COG0742	ribosomal rna small subunit methyltransferase
AUL54_RS03115	COG3679	Belongs to the UPF0342 family
AUL54_RS03130	COG2340	Cysteine-rich secretory protein family
AUL54_RS03135	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
AUL54_RS03145	COG3336	cytochrome c oxidase
AUL54_RS03150	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AUL54_RS03155	COG1845	cytochrome c oxidase, subunit III
AUL54_RS03160	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AUL54_RS03165	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AUL54_RS03165	COG2010	Cytochrome c
AUL54_RS03180	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AUL54_RS03185	COG0772	Belongs to the SEDS family
AUL54_RS03195	COG2066	Belongs to the glutaminase family
AUL54_RS03200	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AUL54_RS03205	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AUL54_RS03215	COG4896	Protein conserved in bacteria
AUL54_RS03225	COG1217	gtp-binding protein TYPA
AUL54_RS03255	COG1595	DNA-templated transcription, initiation
AUL54_RS03270	COG3227	Zinc metalloprotease (Elastase)
AUL54_RS03280	COG0483	inositol monophosphate 1-phosphatase activity
AUL54_RS03300	COG1982	Orn Lys Arg decarboxylase major
AUL54_RS03310	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AUL54_RS03315	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AUL54_RS03320	COG0508	dehydrogenase complex catalyzes the overall conversion of
AUL54_RS03325	COG0022	dehydrogenase e1 component
AUL54_RS03330	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AUL54_RS03335	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AUL54_RS03340	COG3321	synthase
AUL54_RS03340	COG4221	oxidoreductase activity
AUL54_RS03340	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS03340	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS03345	COG4221	oxidoreductase activity
AUL54_RS03345	COG3321	synthase
AUL54_RS03345	COG0300	oxidoreductase activity
AUL54_RS03345	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS03350	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS03350	COG0300	oxidoreductase activity
AUL54_RS03350	COG3321	synthase
AUL54_RS03350	COG4221	oxidoreductase activity
AUL54_RS03355	COG3321	synthase
AUL54_RS03355	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS03355	COG0300	oxidoreductase activity
AUL54_RS03355	COG4221	oxidoreductase activity
AUL54_RS03360	COG4221	oxidoreductase activity
AUL54_RS03360	COG3321	synthase
AUL54_RS03360	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS03360	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS03365	COG3321	synthase
AUL54_RS03365	COG0300	oxidoreductase activity
AUL54_RS03365	COG4221	oxidoreductase activity
AUL54_RS03365	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS03370	COG3321	synthase
AUL54_RS03370	COG4221	oxidoreductase activity
AUL54_RS03370	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS03370	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS03375	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AUL54_RS03375	COG2070	2-Nitropropane dioxygenase
AUL54_RS03380	COG0497	DNA recombination
AUL54_RS03390	COG0242	peptide deformylase activity
AUL54_RS03395	COG0561	phosphatase activity
AUL54_RS03405	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AUL54_RS03415	COG0569	domain protein
AUL54_RS03420	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AUL54_RS03420	COG2105	PFAM AIG2 family protein
AUL54_RS03425	COG3852	Histidine kinase
AUL54_RS03430	COG2002	toxin-antitoxin pair type II binding
AUL54_RS03440	COG1077	Cell shape determining protein MreB Mrl
AUL54_RS03445	COG2309	aminopeptidase activity
AUL54_RS03450	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AUL54_RS03455	COG0488	(ABC) transporter
AUL54_RS03465	COG0681	Belongs to the peptidase S26 family
AUL54_RS03470	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AUL54_RS03470	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AUL54_RS03470	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AUL54_RS03475	COG1105	Belongs to the carbohydrate kinase PfkB family
AUL54_RS03480	COG1349	DNA-binding transcription factor activity
AUL54_RS03485	COG0577	efflux transmembrane transporter activity
AUL54_RS03490	COG1136	(ABC) transporter
AUL54_RS03495	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AUL54_RS03505	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AUL54_RS03510	COG0314	molybdopterin synthase activity
AUL54_RS03515	COG1763	Mo-molybdopterin cofactor biosynthetic process
AUL54_RS03520	COG0303	'Molybdopterin
AUL54_RS03525	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AUL54_RS03545	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AUL54_RS03550	COG0668	transmembrane transport
AUL54_RS03570	COG0716	FMN binding
AUL54_RS03580	COG0716	FMN binding
AUL54_RS03585	COG0583	DNA-binding transcription factor activity
AUL54_RS03590	COG0517	IMP dehydrogenase activity
AUL54_RS03600	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
AUL54_RS03605	COG4703	Protein of unknown function (DUF1797)
AUL54_RS03615	COG2200	EAL domain
AUL54_RS03625	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS03630	COG1408	metallophosphoesterase
AUL54_RS03635	COG1376	ErfK ybiS ycfS ynhG family protein
AUL54_RS03640	COG2814	Major facilitator Superfamily
AUL54_RS03650	COG0835	chemotaxis
AUL54_RS03650	COG0784	Response regulator, receiver
AUL54_RS03655	COG0436	Aminotransferase
AUL54_RS03660	COG4191	Histidine kinase
AUL54_RS03665	COG0768	penicillin binding
AUL54_RS03670	COG2340	Cysteine-rich secretory protein family
AUL54_RS03680	COG2084	Dehydrogenase
AUL54_RS03685	COG0840	transmembrane signaling receptor activity
AUL54_RS03690	COG1533	DNA photolyase activity
AUL54_RS03700	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AUL54_RS03705	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AUL54_RS03710	COG2190	(PTS) system
AUL54_RS03710	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AUL54_RS03710	COG1263	PTS System
AUL54_RS03715	COG3711	transcriptional antiterminator
AUL54_RS03720	COG1609	Transcriptional regulator
AUL54_RS03725	COG0006	proline dipeptidase activity
AUL54_RS03730	COG2217	Heavy metal translocating P-type atpase
AUL54_RS03735	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AUL54_RS03740	COG2244	polysaccharide biosynthetic process
AUL54_RS03745	COG3773	Cell wall hydrolase
AUL54_RS03755	COG4873	Protein conserved in bacteria
AUL54_RS03770	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS03775	COG1733	regulation of RNA biosynthetic process
AUL54_RS03780	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AUL54_RS03785	COG0602	queuosine metabolic process
AUL54_RS03790	COG0720	synthase
AUL54_RS03805	COG3949	Membrane
AUL54_RS03810	COG0542	response to heat
AUL54_RS03815	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AUL54_RS03820	COG1360	Flagellar Motor Protein
AUL54_RS03825	COG1846	Transcriptional regulator
AUL54_RS03830	COG3852	Histidine kinase
AUL54_RS03860	COG0436	Aminotransferase
AUL54_RS03865	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AUL54_RS03880	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AUL54_RS03885	COG5002	protein histidine kinase activity
AUL54_RS03890	COG3594	Acyltransferase
AUL54_RS03895	COG2323	membrane
AUL54_RS03900	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AUL54_RS03925	COG1191	sigma factor activity
AUL54_RS03930	COG0861	Integral membrane protein TerC family
AUL54_RS03935	COG0586	Pfam SNARE associated Golgi protein
AUL54_RS03940	COG3300	MHYT domain
AUL54_RS03940	COG5001	Diguanylate cyclase
AUL54_RS03945	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AUL54_RS03950	COG1793	dna ligase
AUL54_RS03950	COG3285	dna ligase
AUL54_RS03955	COG0726	polysaccharide deacetylase
AUL54_RS03960	COG1846	Transcriptional regulator
AUL54_RS03970	COG0789	Transcriptional regulator
AUL54_RS03975	COG2239	Acts as a magnesium transporter
AUL54_RS03980	COG3858	chitin binding
AUL54_RS03980	COG1388	LysM domain
AUL54_RS03985	COG4721	ABC-type cobalt transport system, permease component
AUL54_RS03990	COG1122	ATPase activity
AUL54_RS03995	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AUL54_RS04000	COG1366	Belongs to the anti-sigma-factor antagonist family
AUL54_RS04005	COG1404	Belongs to the peptidase S8 family
AUL54_RS04020	COG2814	Major facilitator Superfamily
AUL54_RS04025	COG0590	tRNA wobble adenosine to inosine editing
AUL54_RS04035	COG0457	Tetratricopeptide repeat
AUL54_RS04035	COG0463	Glycosyl transferase, family 2
AUL54_RS04050	COG1764	response to oxidative stress
AUL54_RS04055	COG1846	Transcriptional regulator
AUL54_RS04060	COG1764	response to oxidative stress
AUL54_RS04070	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AUL54_RS04075	COG0788	formyltetrahydrofolate deformylase activity
AUL54_RS04080	COG2076	Multidrug Resistance protein
AUL54_RS04085	COG2076	Multidrug Resistance protein
AUL54_RS04090	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AUL54_RS04095	COG1607	acyl-coa hydrolase
AUL54_RS04100	COG1834	amidinotransferase
AUL54_RS04105	COG2706	6-phosphogluconolactonase activity
AUL54_RS04110	COG4608	Belongs to the ABC transporter superfamily
AUL54_RS04115	COG0791	NLP P60 protein
AUL54_RS04120	COG4948	Mandelate Racemase Muconate Lactonizing
AUL54_RS04125	COG1619	proteins homologs of microcin C7 resistance protein MccF
AUL54_RS04130	COG4166	transmembrane transport
AUL54_RS04135	COG0444	Belongs to the ABC transporter superfamily
AUL54_RS04140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AUL54_RS04145	COG0601	transmembrane transport
AUL54_RS04150	COG2362	D-Aminopeptidase
AUL54_RS04155	COG0477	Major facilitator Superfamily
AUL54_RS04160	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AUL54_RS04165	COG0463	Glycosyl transferase, family 2
AUL54_RS04170	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AUL54_RS04175	COG0346	lactoylglutathione lyase activity
AUL54_RS04180	COG0531	amino acid
AUL54_RS04185	COG1392	Phosphate transport regulator
AUL54_RS04190	COG0306	phosphate transporter
AUL54_RS04205	COG5632	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS04205	COG3409	Peptidoglycan-binding domain 1 protein
AUL54_RS04245	COG3778	Protein conserved in bacteria
AUL54_RS04250	COG3299	homolog of phage Mu protein gp47
AUL54_RS04255	COG3628	GPW Gp25 family protein
AUL54_RS04265	COG4193	domain, Protein
AUL54_RS04270	COG1652	LysM domain
AUL54_RS04275	COG5412	phage tail tape measure protein
AUL54_RS04275	COG5412	phage tail tape measure protein
AUL54_RS04275	COG3953	SLT domain
AUL54_RS04275	COG5412	phage tail tape measure protein
AUL54_RS04275	COG3953	SLT domain
AUL54_RS04275	COG3953	SLT domain
AUL54_RS04320	COG4653	Phage capsid family
AUL54_RS04325	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AUL54_RS04330	COG5518	Phage portal protein
AUL54_RS04335	COG1783	phage Terminase large subunit
AUL54_RS04340	COG5484	DNA packaging
AUL54_RS04340	COG3728	DNA packaging
AUL54_RS04345	COG1595	DNA-templated transcription, initiation
AUL54_RS04360	COG1484	DNA-dependent DNA replication
AUL54_RS04365	COG1522	sequence-specific DNA binding
AUL54_RS04375	COG1396	sequence-specific DNA binding
AUL54_RS04380	COG2856	Zn peptidase
AUL54_RS04385	COG4195	phage-related replication protein
AUL54_RS04395	COG5632	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS04395	COG3409	Peptidoglycan-binding domain 1 protein
AUL54_RS04395	COG1388	LysM domain
AUL54_RS04400	COG0457	Tetratricopeptide repeat
AUL54_RS04405	COG2318	DinB family
AUL54_RS04410	COG0730	response to heat
AUL54_RS04420	COG1609	Transcriptional regulator
AUL54_RS04425	COG1252	NADH dehydrogenase
AUL54_RS04435	COG4297	protein containing double-stranded beta helix domain
AUL54_RS04440	COG0697	spore germination
AUL54_RS04445	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AUL54_RS04450	COG0390	transport system, permease component
AUL54_RS04455	COG1587	Uroporphyrinogen-III synthase
AUL54_RS04465	COG1819	glycosyl
AUL54_RS04470	COG2124	cytochrome p450
AUL54_RS04475	COG2427	Protein of unknown function (DUF1641)
AUL54_RS04480	COG3383	formate dehydrogenase (NAD+) activity
AUL54_RS04490	COG2205	protein histidine kinase activity
AUL54_RS04495	COG1285	pathogenesis
AUL54_RS04515	COG1349	DNA-binding transcription factor activity
AUL54_RS04520	COG2723	6-phospho-beta-galactosidase activity
AUL54_RS04525	COG1447	Phosphotransferase system cellobiose-specific component IIA
AUL54_RS04530	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AUL54_RS04530	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AUL54_RS04535	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AUL54_RS04540	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AUL54_RS04545	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
AUL54_RS04555	COG1846	Transcriptional regulator
AUL54_RS04560	COG2814	Major facilitator Superfamily
AUL54_RS04565	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AUL54_RS04570	COG2367	Beta-lactamase
AUL54_RS04660	COG0626	cystathionine gamma-synthase activity
AUL54_RS04665	COG0626	cystathionine gamma-synthase activity
AUL54_RS04670	COG2382	esterase
AUL54_RS04680	COG2153	protein acetylation
AUL54_RS04690	COG1131	(ABC) transporter
AUL54_RS04705	COG0210	DNA helicase
AUL54_RS04760	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AUL54_RS04765	COG0351	phosphomethylpyrimidine kinase
AUL54_RS04770	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AUL54_RS04780	COG2104	thiamine diphosphate biosynthetic process
AUL54_RS04785	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AUL54_RS04790	COG0352	thiamine-phosphate diphosphorylase activity
AUL54_RS04795	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AUL54_RS04800	COG0475	glutathione-regulated potassium exporter activity
AUL54_RS04800	COG0569	domain protein
AUL54_RS04810	COG0564	pseudouridine synthase activity
AUL54_RS04815	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AUL54_RS04820	COG2357	RelA SpoT domain protein
AUL54_RS04830	COG4116	CYTH
AUL54_RS04835	COG0741	lytic transglycosylase activity
AUL54_RS04840	COG2346	COG2346, Truncated hemoglobins
AUL54_RS04845	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AUL54_RS04850	COG1164	Oligoendopeptidase f
AUL54_RS04855	COG4469	Competence protein
AUL54_RS04860	COG4862	establishment of competence for transformation
AUL54_RS04865	COG0861	Integral membrane protein TerC family
AUL54_RS04870	COG1393	Belongs to the ArsC family
AUL54_RS04875	COG0456	acetyltransferase
AUL54_RS04885	COG4608	Belongs to the ABC transporter superfamily
AUL54_RS04890	COG0444	Belongs to the ABC transporter superfamily
AUL54_RS04895	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AUL54_RS04900	COG0601	transmembrane transport
AUL54_RS04905	COG4166	transmembrane transport
AUL54_RS04910	COG0180	Tryptophanyl-tRNA synthetase
AUL54_RS04920	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AUL54_RS04925	COG0601	transmembrane transport
AUL54_RS04935	COG4608	Belongs to the ABC transporter superfamily
AUL54_RS04940	COG0444	Belongs to the ABC transporter superfamily
AUL54_RS04945	COG5504	Zn-dependent protease
AUL54_RS04950	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AUL54_RS04955	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AUL54_RS04970	COG1744	ABC transporter substrate-binding protein PnrA-like
AUL54_RS04980	COG2267	carboxylic ester hydrolase activity
AUL54_RS04995	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AUL54_RS05000	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AUL54_RS05005	COG0505	Belongs to the CarA family
AUL54_RS05010	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AUL54_RS05020	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AUL54_RS05030	COG2271	Major facilitator Superfamily
AUL54_RS05035	COG0277	FAD linked oxidase domain protein
AUL54_RS05045	COG2151	metal-sulfur cluster biosynthetic enzyme
AUL54_RS05050	COG1073	alpha beta
AUL54_RS05055	COG0561	phosphatase activity
AUL54_RS05070	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUL54_RS05080	COG2996	Protein conserved in bacteria
AUL54_RS05090	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AUL54_RS05090	COG0646	methionine synthase
AUL54_RS05100	COG1357	PFAM Pentapeptide repeats (8 copies)
AUL54_RS05105	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AUL54_RS05110	COG1279	arginine transmembrane transporter activity
AUL54_RS05115	COG2318	DinB family
AUL54_RS05120	COG2207	Transcriptional regulator
AUL54_RS05120	COG1917	Cupin 2, conserved barrel domain protein
AUL54_RS05125	COG0534	Mate efflux family protein
AUL54_RS05130	COG1562	ergosterol biosynthetic process
AUL54_RS05135	COG0367	asparagine synthase
AUL54_RS05150	COG0179	Fumarylacetoacetate (FAA) hydrolase
AUL54_RS05190	COG1403	HNH endonuclease
AUL54_RS05195	COG0419	ATPase involved in DNA repair
AUL54_RS05200	COG0420	3'-5' exonuclease activity
AUL54_RS05215	COG2323	membrane
AUL54_RS05220	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
AUL54_RS05230	COG2814	Major facilitator Superfamily
AUL54_RS05235	COG3180	Ammonia monooxygenase
AUL54_RS05240	COG1846	Transcriptional regulator
AUL54_RS05245	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AUL54_RS05250	COG0681	Belongs to the peptidase S26 family
AUL54_RS05255	COG0398	Pfam SNARE associated Golgi protein
AUL54_RS05270	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AUL54_RS05290	COG5646	InterPro IPR014922
AUL54_RS05295	COG4903	ComK protein
AUL54_RS05305	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS05310	COG0723	plastoquinol--plastocyanin reductase activity
AUL54_RS05310	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AUL54_RS05315	COG0840	transmembrane signaling receptor activity
AUL54_RS05320	COG1268	BioY protein
AUL54_RS05325	COG0318	PFAM AMP-dependent synthetase and ligase
AUL54_RS05330	COG0183	Belongs to the thiolase family
AUL54_RS05335	COG0406	alpha-ribazole phosphatase activity
AUL54_RS05340	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
AUL54_RS05345	COG1404	Belongs to the peptidase S8 family
AUL54_RS05350	COG0501	Belongs to the peptidase M48B family
AUL54_RS05360	COG0318	PFAM AMP-dependent synthetase and ligase
AUL54_RS05365	COG0702	epimerase
AUL54_RS05370	COG0095	Lipoate-protein ligase
AUL54_RS05375	COG1234	tRNA 3'-trailer cleavage
AUL54_RS05380	COG1301	dicarboxylic acid transport
AUL54_RS05385	COG1363	Peptidase, m42
AUL54_RS05395	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AUL54_RS05400	COG1511	domain protein
AUL54_RS05405	COG1309	transcriptional regulator
AUL54_RS05410	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
AUL54_RS05415	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AUL54_RS05425	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AUL54_RS05430	COG2329	Antibiotic biosynthesis monooxygenase
AUL54_RS05435	COG3069	C4-dicarboxylate transmembrane transporter activity
AUL54_RS05440	COG1473	amidohydrolase
AUL54_RS05450	COG4473	ABC transporter
AUL54_RS05455	COG1131	(ABC) transporter
AUL54_RS05460	COG0537	adenosine 5'-monophosphoramidase activity
AUL54_RS05465	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AUL54_RS05480	COG4980	gas vesicle protein
AUL54_RS05510	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AUL54_RS05525	COG4717	serine-type aminopeptidase activity
AUL54_RS05530	COG0420	3'-5' exonuclease activity
AUL54_RS05535	COG1668	transmembrane transport
AUL54_RS05540	COG4152	abc transporter atp-binding protein
AUL54_RS05550	COG1024	Enoyl-CoA hydratase
AUL54_RS05560	COG0490	domain, Protein
AUL54_RS05565	COG0475	glutathione-regulated potassium exporter activity
AUL54_RS05575	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AUL54_RS05580	COG0561	phosphatase activity
AUL54_RS05585	COG4335	DNA alkylation repair
AUL54_RS05600	COG0189	ligase activity
AUL54_RS05605	COG0189	ligase activity
AUL54_RS05620	COG0702	epimerase
AUL54_RS05625	COG1132	(ABC) transporter
AUL54_RS05630	COG1132	(ABC) transporter
AUL54_RS05635	COG0589	response to stress
AUL54_RS05645	COG3226	Transcriptional regulator
AUL54_RS05650	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AUL54_RS05655	COG0726	polysaccharide deacetylase
AUL54_RS05660	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AUL54_RS05665	COG0668	transmembrane transport
AUL54_RS05670	COG0584	glycerophosphoryl diester phosphodiesterase
AUL54_RS05675	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AUL54_RS05680	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AUL54_RS05685	COG1253	flavin adenine dinucleotide binding
AUL54_RS05695	COG0436	Aminotransferase
AUL54_RS05700	COG0789	Transcriptional regulator
AUL54_RS05705	COG1253	flavin adenine dinucleotide binding
AUL54_RS05710	COG0204	Acyl-transferase
AUL54_RS05715	COG1595	DNA-templated transcription, initiation
AUL54_RS05735	COG0733	neurotransmitter:sodium symporter activity
AUL54_RS05740	COG0531	amino acid
AUL54_RS05750	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS05755	COG0372	Belongs to the citrate synthase family
AUL54_RS05760	COG0583	DNA-binding transcription factor activity
AUL54_RS05765	COG0791	NLP P60 protein
AUL54_RS05765	COG1388	LysM domain
AUL54_RS05770	COG1785	Belongs to the alkaline phosphatase family
AUL54_RS05775	COG2719	SpoVR family
AUL54_RS05780	COG0668	transmembrane transport
AUL54_RS05785	COG1959	2 iron, 2 sulfur cluster binding
AUL54_RS05790	COG1388	LysM domain
AUL54_RS05790	COG0791	NLP P60 protein
AUL54_RS05805	COG0431	NADPH-dependent FMN reductase
AUL54_RS05815	COG4585	Histidine kinase
AUL54_RS05815	COG2203	Gaf domain
AUL54_RS05820	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AUL54_RS05825	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AUL54_RS05835	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AUL54_RS05840	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
AUL54_RS05845	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AUL54_RS05855	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AUL54_RS05860	COG0517	IMP dehydrogenase activity
AUL54_RS05870	COG0564	pseudouridine synthase activity
AUL54_RS05875	COG3764	Sortase (surface protein transpeptidase)
AUL54_RS05880	COG1525	nuclease
AUL54_RS05880	COG0737	Belongs to the 5'-nucleotidase family
AUL54_RS05880	COG4085	toxin activity
AUL54_RS05885	COG5577	PFAM Coat F domain
AUL54_RS05905	COG1823	symporter activity
AUL54_RS05910	COG3706	GGDEF domain
AUL54_RS05915	COG1278	Cold shock
AUL54_RS05920	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AUL54_RS05925	COG1131	(ABC) transporter
AUL54_RS05930	COG1131	(ABC) transporter
AUL54_RS05935	COG1725	Transcriptional regulator
AUL54_RS05950	COG0655	NAD(P)H dehydrogenase (quinone) activity
AUL54_RS05955	COG2814	Major facilitator Superfamily
AUL54_RS05960	COG1566	PFAM secretion protein HlyD family protein
AUL54_RS05965	COG1846	Transcriptional regulator
AUL54_RS05975	COG2766	serine protein kinase
AUL54_RS05980	COG1664	Polymer-forming cytoskeletal
AUL54_RS05985	COG1664	Polymer-forming cytoskeletal
AUL54_RS05990	COG0789	Transcriptional regulator
AUL54_RS05995	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AUL54_RS06005	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AUL54_RS06010	COG3382	B3 4 domain protein
AUL54_RS06020	COG1476	TRANSCRIPTIONal
AUL54_RS06045	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AUL54_RS06050	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AUL54_RS06055	COG1116	anion transmembrane transporter activity
AUL54_RS06065	COG0753	catalase activity
AUL54_RS06070	COG4608	Belongs to the ABC transporter superfamily
AUL54_RS06075	COG0444	Belongs to the ABC transporter superfamily
AUL54_RS06080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AUL54_RS06085	COG0601	transmembrane transport
AUL54_RS06090	COG4166	transmembrane transport
AUL54_RS06100	COG0277	FAD linked oxidase domain protein
AUL54_RS06110	COG3340	Belongs to the peptidase S51 family
AUL54_RS06245	COG0735	belongs to the Fur family
AUL54_RS06250	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AUL54_RS06260	COG4129	membrane
AUL54_RS06265	COG1132	(ABC) transporter
AUL54_RS06285	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS06295	COG1194	a g-specific adenine glycosylase
AUL54_RS06300	COG0457	Tetratricopeptide repeat
AUL54_RS06360	COG3953	SLT domain
AUL54_RS06360	COG5280	Phage tail tape measure protein TP901
AUL54_RS06400	COG0740	serine-type endopeptidase activity
AUL54_RS06455	COG1595	DNA-templated transcription, initiation
AUL54_RS06470	COG0305	Participates in initiation and elongation during chromosome replication
AUL54_RS06495	COG3645	SOS response
AUL54_RS06495	COG3646	Phage regulatory protein
AUL54_RS06530	COG0582	viral genome integration into host DNA
AUL54_RS06540	COG1988	membrane-bound metal-dependent
AUL54_RS06545	COG4485	Bacterial membrane protein, YfhO
AUL54_RS06550	COG0463	Glycosyl transferase, family 2
AUL54_RS06555	COG0596	Alpha beta hydrolase
AUL54_RS06560	COG5658	integral membrane protein
AUL54_RS06565	COG3103	Sh3 type 3 domain protein
AUL54_RS06580	COG2814	Major facilitator Superfamily
AUL54_RS06595	COG1090	epimerase
AUL54_RS06605	COG0778	Nitroreductase
AUL54_RS06610	COG0384	phenazine biosynthesis protein PhzF
AUL54_RS06615	COG0392	lysyltransferase activity
AUL54_RS06615	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AUL54_RS06620	COG1846	Transcriptional regulator
AUL54_RS06625	COG2814	Major facilitator Superfamily
AUL54_RS06630	COG2318	DinB family
AUL54_RS06635	COG2732	(Barnase) inhibitor
AUL54_RS06640	COG0574	Belongs to the PEP-utilizing enzyme family
AUL54_RS06640	COG3848	Pyruvate phosphate dikinase
AUL54_RS06645	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
AUL54_RS06650	COG2249	NAD(P)H dehydrogenase (quinone) activity
AUL54_RS06655	COG1695	Transcriptional regulator
AUL54_RS06665	COG2514	catechol 2,3-dioxygenase activity
AUL54_RS06670	COG2259	Doxx family
AUL54_RS06675	COG1132	(ABC) transporter
AUL54_RS06680	COG1132	(ABC) transporter
AUL54_RS06685	COG5434	Belongs to the glycosyl hydrolase 28 family
AUL54_RS06690	COG1263	PTS System
AUL54_RS06690	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AUL54_RS06695	COG1737	Transcriptional regulator
AUL54_RS06700	COG1486	melibiose metabolic process
AUL54_RS06710	COG3284	Transcriptional regulator
AUL54_RS06715	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AUL54_RS06720	COG0508	dehydrogenase complex catalyzes the overall conversion of
AUL54_RS06725	COG0022	dehydrogenase e1 component
AUL54_RS06730	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AUL54_RS06735	COG4637	Psort location Cytoplasmic, score
AUL54_RS06740	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AUL54_RS06750	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AUL54_RS06755	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AUL54_RS06760	COG0598	Magnesium transport protein CorA
AUL54_RS06770	COG2084	Dehydrogenase
AUL54_RS06775	COG0726	polysaccharide deacetylase
AUL54_RS06785	COG0535	radical SAM domain protein
AUL54_RS06790	COG0668	transmembrane transport
AUL54_RS06800	COG0387	Pfam Sodium calcium exchanger
AUL54_RS06805	COG0477	Major facilitator Superfamily
AUL54_RS06810	COG1295	ribonuclease BN
AUL54_RS06815	COG4980	gas vesicle protein
AUL54_RS06820	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AUL54_RS06830	COG2814	Major facilitator Superfamily
AUL54_RS06845	COG1609	Transcriptional regulator
AUL54_RS06850	COG0693	protein deglycase activity
AUL54_RS06855	COG0737	Belongs to the 5'-nucleotidase family
AUL54_RS06870	COG0778	Nitroreductase
AUL54_RS06885	COG0071	Belongs to the small heat shock protein (HSP20) family
AUL54_RS06895	COG1368	sulfuric ester hydrolase activity
AUL54_RS06905	COG1263	PTS System
AUL54_RS06905	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AUL54_RS06910	COG0024	Methionine aminopeptidase
AUL54_RS06920	COG2258	MOSC domain
AUL54_RS06930	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
AUL54_RS06940	COG2851	Citrate transporter
AUL54_RS06945	COG3181	Tripartite tricarboxylate transporter family receptor
AUL54_RS06950	COG4565	transcriptional regulatory protein
AUL54_RS06955	COG3290	protein histidine kinase activity
AUL54_RS06975	COG0471	metal ion transport
AUL54_RS06980	COG3866	Pectate lyase
AUL54_RS06995	COG2130	NADP-dependent
AUL54_RS07005	COG0513	Belongs to the DEAD box helicase family
AUL54_RS07010	COG0488	(ABC) transporter
AUL54_RS07015	COG2814	Major facilitator Superfamily
AUL54_RS07020	COG0789	Transcriptional regulator
AUL54_RS07040	COG0488	(ABC) transporter
AUL54_RS07045	COG0457	Tetratricopeptide repeat
AUL54_RS07045	COG0463	Glycosyl transferase, family 2
AUL54_RS07050	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS07055	COG0840	transmembrane signaling receptor activity
AUL54_RS07060	COG1012	belongs to the aldehyde dehydrogenase family
AUL54_RS07065	COG0531	amino acid
AUL54_RS07070	COG2223	nitrite transmembrane transporter activity
AUL54_RS07075	COG1442	glycosyl transferase family 8
AUL54_RS07080	COG1216	Glycosyl transferase, family 2
AUL54_RS07085	COG1442	glycosyl transferase family 8
AUL54_RS07090	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AUL54_RS07095	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AUL54_RS07100	COG1368	sulfuric ester hydrolase activity
AUL54_RS07105	COG2124	cytochrome p450
AUL54_RS07105	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AUL54_RS07115	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AUL54_RS07120	COG1846	Transcriptional regulator
AUL54_RS07125	COG0670	Belongs to the BI1 family
AUL54_RS07130	COG0196	riboflavin kinase activity
AUL54_RS07135	COG1366	Belongs to the anti-sigma-factor antagonist family
AUL54_RS07140	COG0346	lactoylglutathione lyase activity
AUL54_RS07145	COG2329	Antibiotic biosynthesis monooxygenase
AUL54_RS07150	COG2323	membrane
AUL54_RS07160	COG0454	-acetyltransferase
AUL54_RS07165	COG3546	catalase activity
AUL54_RS07190	COG5444	nuclease activity
AUL54_RS07220	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AUL54_RS07225	COG1597	lipid kinase activity
AUL54_RS07230	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AUL54_RS07235	COG1309	transcriptional regulator
AUL54_RS07255	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AUL54_RS07260	COG1285	pathogenesis
AUL54_RS07265	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AUL54_RS07270	COG4851	CamS sex pheromone cAM373 precursor
AUL54_RS07280	COG0210	DNA helicase
AUL54_RS07290	COG0069	glutamate synthase activity
AUL54_RS07295	COG4496	protein, YerC YecD
AUL54_RS07300	COG1470	cell adhesion involved in biofilm formation
AUL54_RS07305	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AUL54_RS07315	COG0151	Belongs to the GarS family
AUL54_RS07320	COG0138	bifunctional purine biosynthesis protein purh
AUL54_RS07325	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AUL54_RS07335	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AUL54_RS07350	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AUL54_RS07355	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AUL54_RS07360	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AUL54_RS07365	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AUL54_RS07370	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AUL54_RS07390	COG3064	Membrane
AUL54_RS07395	COG2252	PERMEase
AUL54_RS07415	COG1305	Transglutaminase-like
AUL54_RS07420	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
AUL54_RS07425	COG0714	Associated with various cellular activities
AUL54_RS07440	COG1794	racemase activity, acting on amino acids and derivatives
AUL54_RS07445	COG2175	clavaminate synthase activity
AUL54_RS07450	COG1181	Belongs to the D-alanine--D-alanine ligase family
AUL54_RS07465	COG0017	Asparaginyl-tRNA synthetase
AUL54_RS07470	COG1113	amino acid transport
AUL54_RS07475	COG2132	Multicopper oxidase
AUL54_RS07485	COG0823	Involved in the tonB-independent uptake of proteins
AUL54_RS07490	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AUL54_RS07495	COG1063	alcohol dehydrogenase
AUL54_RS07500	COG1595	DNA-templated transcription, initiation
AUL54_RS07510	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AUL54_RS07510	COG2755	lipolytic protein G-D-S-L family
AUL54_RS07515	COG4260	virion core protein, lumpy skin disease virus
AUL54_RS07520	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AUL54_RS07525	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AUL54_RS07530	COG1842	Phage shock protein A
AUL54_RS07540	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AUL54_RS07545	COG2211	Major facilitator Superfamily
AUL54_RS07550	COG1063	alcohol dehydrogenase
AUL54_RS07555	COG0457	Tetratricopeptide repeat
AUL54_RS07580	COG1266	CAAX protease self-immunity
AUL54_RS07590	COG0805	protein transport
AUL54_RS07595	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AUL54_RS07610	COG0488	(ABC) transporter
AUL54_RS07615	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AUL54_RS07620	COG0456	acetyltransferase
AUL54_RS07625	COG1214	PFAM Peptidase M22, glycoprotease
AUL54_RS07630	COG0802	atpase or kinase
AUL54_RS07635	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AUL54_RS07675	COG2814	Major facilitator Superfamily
AUL54_RS07680	COG0604	alcohol dehydrogenase
AUL54_RS07685	COG3832	glyoxalase III activity
AUL54_RS07695	COG0531	amino acid
AUL54_RS07700	COG1309	transcriptional regulator
AUL54_RS07705	COG2076	Multidrug Resistance protein
AUL54_RS07710	COG2076	Multidrug Resistance protein
AUL54_RS07715	COG2807	transmembrane transport
AUL54_RS07720	COG2186	Transcriptional regulator
AUL54_RS07725	COG2814	Major facilitator Superfamily
AUL54_RS07730	COG1388	LysM domain
AUL54_RS07735	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AUL54_RS07750	COG1819	glycosyl
AUL54_RS07755	COG1802	Transcriptional regulator
AUL54_RS07760	COG0473	3-isopropylmalate dehydrogenase activity
AUL54_RS07765	COG0596	Alpha beta hydrolase
AUL54_RS07770	COG1051	belongs to the nudix hydrolase family
AUL54_RS07775	COG0456	acetyltransferase
AUL54_RS07780	COG0730	response to heat
AUL54_RS07790	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AUL54_RS07795	COG2814	Major facilitator Superfamily
AUL54_RS07805	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUL54_RS07810	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AUL54_RS07815	COG0488	(ABC) transporter
AUL54_RS07820	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AUL54_RS07825	COG2409	Drug exporters of the RND superfamily
AUL54_RS07830	COG2197	response regulator
AUL54_RS07835	COG4585	Histidine kinase
AUL54_RS07840	COG0110	maltose O-acetyltransferase activity
AUL54_RS07850	COG0738	Major facilitator superfamily
AUL54_RS07860	COG5577	PFAM Coat F domain
AUL54_RS07865	COG1063	alcohol dehydrogenase
AUL54_RS07875	COG5577	PFAM Coat F domain
AUL54_RS07910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AUL54_RS07920	COG0789	Transcriptional regulator
AUL54_RS07925	COG1064	alcohol dehydrogenase
AUL54_RS07940	COG2318	DinB family
AUL54_RS07945	COG0456	acetyltransferase
AUL54_RS07950	COG0662	Cupin 2, conserved barrel domain protein
AUL54_RS07970	COG0277	FAD linked oxidase domain protein
AUL54_RS07985	COG0662	Cupin 2, conserved barrel domain protein
AUL54_RS07990	COG3621	Patatin-like phospholipase
AUL54_RS07995	COG2271	Major facilitator Superfamily
AUL54_RS08000	COG1846	Transcriptional regulator
AUL54_RS08000	COG0456	acetyltransferase
AUL54_RS08020	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AUL54_RS08025	COG0477	Major facilitator Superfamily
AUL54_RS08045	COG2814	Major facilitator Superfamily
AUL54_RS08050	COG2807	transmembrane transport
AUL54_RS08060	COG0583	DNA-binding transcription factor activity
AUL54_RS08065	COG1329	Transcriptional regulator
AUL54_RS08070	COG1278	Cold shock
AUL54_RS08075	COG2910	NAD(P)H-binding
AUL54_RS08080	COG1959	2 iron, 2 sulfur cluster binding
AUL54_RS08085	COG2030	dehydratase
AUL54_RS08095	COG1846	Transcriptional regulator
AUL54_RS08100	COG1764	response to oxidative stress
AUL54_RS08125	COG2249	NAD(P)H dehydrogenase (quinone) activity
AUL54_RS08135	COG1959	2 iron, 2 sulfur cluster binding
AUL54_RS08140	COG1660	Displays ATPase and GTPase activities
AUL54_RS08150	COG0457	Tetratricopeptide repeat
AUL54_RS08155	COG1204	response to ionizing radiation
AUL54_RS08175	COG0791	NLP P60 protein
AUL54_RS08175	COG0741	lytic transglycosylase activity
AUL54_RS08180	COG5644	endopeptidase inhibitor activity
AUL54_RS08190	COG0433	COG0433 Predicted ATPase
AUL54_RS08235	COG2946	Replication initiation factor
AUL54_RS08240	COG1674	ftsk spoiiie
AUL54_RS08265	COG1396	sequence-specific DNA binding
AUL54_RS08270	COG2856	Zn peptidase
AUL54_RS08275	COG0582	viral genome integration into host DNA
AUL54_RS08320	COG2183	response to ionizing radiation
AUL54_RS08325	COG2208	phosphoserine phosphatase activity
AUL54_RS08330	COG1191	sigma factor activity
AUL54_RS08340	COG1366	Belongs to the anti-sigma-factor antagonist family
AUL54_RS08345	COG2208	phosphoserine phosphatase activity
AUL54_RS08350	COG2172	sigma factor antagonist activity
AUL54_RS08355	COG1366	Belongs to the anti-sigma-factor antagonist family
AUL54_RS08360	COG1366	Belongs to the anti-sigma-factor antagonist family
AUL54_RS08365	COG2337	Toxic component of a toxin-antitoxin (TA) module
AUL54_RS08370	COG0864	Transcriptional regulator
AUL54_RS08375	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AUL54_RS08380	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AUL54_RS08390	COG0705	Rhomboid family
AUL54_RS08395	COG3428	Bacterial PH domain
AUL54_RS08400	COG3402	PFAM membrane-flanked domain
AUL54_RS08405	COG0513	Belongs to the DEAD box helicase family
AUL54_RS08410	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AUL54_RS08420	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AUL54_RS08425	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AUL54_RS08435	COG1960	acyl-CoA dehydrogenase activity
AUL54_RS08445	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AUL54_RS08450	COG1131	(ABC) transporter
AUL54_RS08455	COG0628	permease
AUL54_RS08460	COG1301	dicarboxylic acid transport
AUL54_RS08465	COG4565	transcriptional regulatory protein
AUL54_RS08470	COG3290	protein histidine kinase activity
AUL54_RS08475	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AUL54_RS08480	COG3546	catalase activity
AUL54_RS08485	COG2329	Antibiotic biosynthesis monooxygenase
AUL54_RS08490	COG0662	Cupin 2, conserved barrel domain protein
AUL54_RS08495	COG3729	General stress protein
AUL54_RS08500	COG2217	Heavy metal translocating P-type atpase
AUL54_RS08505	COG2076	Multidrug Resistance protein
AUL54_RS08515	COG4876	unkown
AUL54_RS08530	COG1914	H( )-stimulated, divalent metal cation uptake system
AUL54_RS08565	COG0028	Belongs to the TPP enzyme family
AUL54_RS08570	COG0494	nUDIX hydrolase
AUL54_RS08575	COG0531	amino acid
AUL54_RS08585	COG1215	transferase activity, transferring glycosyl groups
AUL54_RS08590	COG5298	Protein conserved in bacteria
AUL54_RS08595	COG3706	GGDEF domain
AUL54_RS08600	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AUL54_RS08605	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AUL54_RS08605	COG0551	DNA topoisomerase type I activity
AUL54_RS08610	COG1522	sequence-specific DNA binding
AUL54_RS08615	COG2814	Major facilitator Superfamily
AUL54_RS08625	COG3871	stress protein (general stress protein 26)
AUL54_RS08630	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AUL54_RS08635	COG1917	Cupin 2, conserved barrel domain protein
AUL54_RS08640	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS08645	COG0318	PFAM AMP-dependent synthetase and ligase
AUL54_RS08650	COG3711	transcriptional antiterminator
AUL54_RS08655	COG4989	oxidoreductase activity
AUL54_RS08660	COG0768	penicillin binding
AUL54_RS08665	COG2329	Antibiotic biosynthesis monooxygenase
AUL54_RS08675	COG2755	lipolytic protein G-D-S-L family
AUL54_RS08680	COG1414	Transcriptional regulator
AUL54_RS08685	COG1984	allophanate hydrolase subunit 2
AUL54_RS08690	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AUL54_RS08700	COG1914	H( )-stimulated, divalent metal cation uptake system
AUL54_RS08710	COG0561	phosphatase activity
AUL54_RS08715	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AUL54_RS08725	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AUL54_RS08730	COG2213	PTS system mannitol-specific
AUL54_RS08740	COG1349	DNA-binding transcription factor activity
AUL54_RS08745	COG2372	response to copper ion
AUL54_RS08745	COG1276	copper resistance
AUL54_RS08750	COG4549	nuclear export factor GLE1
AUL54_RS08755	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS08760	COG4975	Glucose uptake
AUL54_RS08765	COG1012	belongs to the aldehyde dehydrogenase family
AUL54_RS08770	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AUL54_RS08775	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AUL54_RS08780	COG0640	Transcriptional regulator
AUL54_RS08785	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AUL54_RS08790	COG0778	Nitroreductase
AUL54_RS08795	COG1309	transcriptional regulator
AUL54_RS08800	COG2814	Major facilitator Superfamily
AUL54_RS08805	COG4607	ABC-type enterochelin transport system periplasmic component
AUL54_RS08810	COG4604	ABC transporter, ATP-binding protein
AUL54_RS08815	COG4605	iron ion homeostasis
AUL54_RS08820	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AUL54_RS08825	COG0527	aspartate kinase activity
AUL54_RS08835	COG0457	Tetratricopeptide repeat
AUL54_RS08840	COG3850	Histidine kinase
AUL54_RS08840	COG5002	protein histidine kinase activity
AUL54_RS08845	COG0745	RESPONSE REGULATOR receiver
AUL54_RS08850	COG0577	efflux transmembrane transporter activity
AUL54_RS08855	COG1136	(ABC) transporter
AUL54_RS08860	COG2079	MmgE PrpD family protein
AUL54_RS08865	COG1473	amidohydrolase
AUL54_RS08870	COG1126	abc transporter atp-binding protein
AUL54_RS08875	COG0765	amino acid transport
AUL54_RS08880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUL54_RS08885	COG0456	acetyltransferase
AUL54_RS08890	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AUL54_RS08895	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AUL54_RS08905	COG0697	spore germination
AUL54_RS08915	COG5434	Belongs to the glycosyl hydrolase 28 family
AUL54_RS08920	COG3104	oligopeptide transport
AUL54_RS08935	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AUL54_RS08940	COG0163	prenyltransferase activity
AUL54_RS08945	COG0583	DNA-binding transcription factor activity
AUL54_RS08950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUL54_RS08955	COG0765	amino acid transport
AUL54_RS08960	COG1126	abc transporter atp-binding protein
AUL54_RS08965	COG2364	Membrane
AUL54_RS08980	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
AUL54_RS08985	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS08990	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS08995	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS09000	COG1733	regulation of RNA biosynthetic process
AUL54_RS09005	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
AUL54_RS09010	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AUL54_RS09015	COG3209	COG3209 Rhs family protein
AUL54_RS09025	COG2723	6-phospho-beta-galactosidase activity
AUL54_RS09035	COG1714	RDD family
AUL54_RS09040	COG1063	alcohol dehydrogenase
AUL54_RS09045	COG0523	cobalamin synthesis protein
AUL54_RS09050	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AUL54_RS09055	COG2146	nitrite reductase [NAD(P)H] activity
AUL54_RS09060	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AUL54_RS09060	COG1587	Uroporphyrinogen-III synthase
AUL54_RS09070	COG2508	Transcriptional regulator
AUL54_RS09075	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AUL54_RS09080	COG1012	belongs to the aldehyde dehydrogenase family
AUL54_RS09085	COG0506	proline dehydrogenase activity
AUL54_RS09090	COG3541	Predicted nucleotidyltransferase
AUL54_RS09095	COG3458	cephalosporin-C deacetylase activity
AUL54_RS09100	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AUL54_RS09105	COG2271	Major facilitator Superfamily
AUL54_RS09125	COG3665	Urea carboxylase-associated protein
AUL54_RS09130	COG1113	amino acid transport
AUL54_RS09135	COG3403	YqcI/YcgG family
AUL54_RS09140	COG1280	lysine exporter protein (LysE YggA)
AUL54_RS09145	COG1846	Transcriptional regulator
AUL54_RS09150	COG2814	Major facilitator Superfamily
AUL54_RS09160	COG0366	Alpha amylase catalytic
AUL54_RS09170	COG1288	antiporter activity
AUL54_RS09175	COG1473	amidohydrolase
AUL54_RS09185	COG2113	Glycine betaine
AUL54_RS09190	COG4176	ABC-type proline glycine betaine transport system permease component
AUL54_RS09195	COG4175	Glycine betaine
AUL54_RS09195	COG0517	IMP dehydrogenase activity
AUL54_RS09200	COG0477	Major facilitator Superfamily
AUL54_RS09205	COG3853	Toxic anion resistance protein (TelA)
AUL54_RS09215	COG0861	Integral membrane protein TerC family
AUL54_RS09220	COG2310	stress, protein
AUL54_RS09225	COG2310	stress, protein
AUL54_RS09230	COG2310	stress, protein
AUL54_RS09240	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AUL54_RS09245	COG1121	(ABC) transporter
AUL54_RS09250	COG0803	Belongs to the bacterial solute-binding protein 9 family
AUL54_RS09255	COG0366	Alpha amylase catalytic
AUL54_RS09265	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS09270	COG0457	Tetratricopeptide repeat
AUL54_RS09275	COG1876	peptidase activity
AUL54_RS09280	COG1595	DNA-templated transcription, initiation
AUL54_RS09285	COG1595	DNA-templated transcription, initiation
AUL54_RS09295	COG0667	Aldo Keto reductase
AUL54_RS09300	COG3012	SEC-C Motif Domain Protein
AUL54_RS09300	COG1405	negative regulation of cell septum assembly
AUL54_RS09305	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AUL54_RS09310	COG0252	asparaginase activity
AUL54_RS09315	COG1309	transcriptional regulator
AUL54_RS09320	COG0477	Major facilitator Superfamily
AUL54_RS09325	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AUL54_RS09330	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AUL54_RS09335	COG0805	protein transport
AUL54_RS09340	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AUL54_RS09345	COG3540	Alkaline phosphatase
AUL54_RS09350	COG3773	Cell wall hydrolase
AUL54_RS09360	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AUL54_RS09365	COG2259	Doxx family
AUL54_RS09370	COG0346	lactoylglutathione lyase activity
AUL54_RS09375	COG0778	Nitroreductase
AUL54_RS09380	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AUL54_RS09385	COG0784	Response regulator, receiver
AUL54_RS09390	COG4191	Histidine kinase
AUL54_RS09395	COG2066	Belongs to the glutaminase family
AUL54_RS09400	COG1115	amino acid carrier protein
AUL54_RS09405	COG2040	homocysteine
AUL54_RS09410	COG0833	amino acid
AUL54_RS09415	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AUL54_RS09420	COG1301	dicarboxylic acid transport
AUL54_RS09435	COG0688	phosphatidylethanolamine metabolic process
AUL54_RS09440	COG0586	Pfam SNARE associated Golgi protein
AUL54_RS09445	COG1183	phosphatidylcholine synthase activity
AUL54_RS09455	COG0371	Dehydrogenase
AUL54_RS09465	COG5444	nuclease activity
AUL54_RS09475	COG3409	Peptidoglycan-binding domain 1 protein
AUL54_RS09485	COG2368	4-hydroxyphenylacetate
AUL54_RS09495	COG2271	Major facilitator Superfamily
AUL54_RS09500	COG0584	glycerophosphoryl diester phosphodiesterase
AUL54_RS09515	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
AUL54_RS09520	COG0531	amino acid
AUL54_RS09550	COG1511	domain protein
AUL54_RS09550	COG0842	Transport permease protein
AUL54_RS09560	COG1131	(ABC) transporter
AUL54_RS09565	COG2197	response regulator
AUL54_RS09570	COG4585	Histidine kinase
AUL54_RS09575	COG1011	Hydrolase
AUL54_RS09580	COG1113	amino acid transport
AUL54_RS09585	COG1846	Transcriptional regulator
AUL54_RS09590	COG1380	Effector of murein hydrolase LrgA
AUL54_RS09595	COG1346	cytolysis
AUL54_RS09620	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AUL54_RS09635	COG4856	YbbR-like protein
AUL54_RS09640	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AUL54_RS09645	COG5662	AntiSigma factor
AUL54_RS09650	COG1595	DNA-templated transcription, initiation
AUL54_RS09680	COG1683	Conserved Protein
AUL54_RS09685	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AUL54_RS09695	COG1263	PTS System
AUL54_RS09695	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AUL54_RS09700	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AUL54_RS09705	COG1472	Belongs to the glycosyl hydrolase 3 family
AUL54_RS09710	COG3876	Protein conserved in bacteria
AUL54_RS09715	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AUL54_RS09715	COG2207	Transcriptional regulator
AUL54_RS09720	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AUL54_RS09725	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AUL54_RS09730	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AUL54_RS09735	COG2819	hydrolase of the alpha beta superfamily
AUL54_RS09740	COG0385	Bile acid
AUL54_RS09745	COG0659	secondary active sulfate transmembrane transporter activity
AUL54_RS09760	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AUL54_RS09765	COG0738	Major facilitator superfamily
AUL54_RS09825	COG0726	polysaccharide deacetylase
AUL54_RS09830	COG2194	sulfuric ester hydrolase activity
AUL54_RS09840	COG0489	protein tyrosine kinase activity
AUL54_RS09845	COG0860	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS09855	COG2318	DinB family
AUL54_RS09860	COG2226	methyltransferase
AUL54_RS09880	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AUL54_RS09885	COG1122	ATPase activity
AUL54_RS09890	COG1122	ATPase activity
AUL54_RS09915	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AUL54_RS09925	COG0024	Methionine aminopeptidase
AUL54_RS09935	COG0201	protein transport
AUL54_RS09950	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AUL54_RS10040	COG0596	Alpha beta hydrolase
AUL54_RS10065	COG1358	cellular component organization or biogenesis
AUL54_RS10080	COG2813	Specifically methylates the guanine in position
AUL54_RS10105	COG0250	Participates in transcription elongation, termination and antitermination
AUL54_RS10110	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AUL54_RS10120	COG1595	DNA-templated transcription, initiation
AUL54_RS10125	COG3688	RNA-binding protein containing a PIN domain
AUL54_RS10130	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AUL54_RS10135	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AUL54_RS10145	COG1045	serine acetyltransferase
AUL54_RS10165	COG4956	integral membrane protein (PIN domain superfamily)
AUL54_RS10170	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
AUL54_RS10175	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AUL54_RS10180	COG0542	response to heat
AUL54_RS10190	COG3880	PFAM UvrB UvrC protein
AUL54_RS10195	COG4463	regulation of RNA biosynthetic process
AUL54_RS10275	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AUL54_RS10280	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AUL54_RS10285	COG1396	sequence-specific DNA binding
AUL54_RS10290	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AUL54_RS10295	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AUL54_RS10300	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AUL54_RS10305	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AUL54_RS10310	COG0512	Glutamine amidotransferase of anthranilate synthase
AUL54_RS10315	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AUL54_RS10320	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AUL54_RS10325	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AUL54_RS10340	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AUL54_RS10345	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AUL54_RS10350	COG0037	tRNA processing
AUL54_RS10355	COG0515	serine threonine protein kinase
AUL54_RS10360	COG2304	oxidoreductase activity
AUL54_RS10365	COG2208	phosphoserine phosphatase activity
AUL54_RS10380	COG1098	S1 RNA binding domain
AUL54_RS10385	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AUL54_RS10400	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AUL54_RS10405	COG3956	TIGRFAM MazG family protein
AUL54_RS10410	COG2244	polysaccharide biosynthetic process
AUL54_RS10415	COG2002	toxin-antitoxin pair type II binding
AUL54_RS10420	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AUL54_RS10440	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AUL54_RS10455	COG0251	oxidation-reduction process
AUL54_RS10460	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AUL54_RS10475	COG4466	Protein conserved in bacteria
AUL54_RS10485	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AUL54_RS10490	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AUL54_RS10495	COG3583	domain protein
AUL54_RS10495	COG3584	3D domain protein
AUL54_RS10500	COG0084	hydrolase, TatD family'
AUL54_RS10505	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUL54_RS10505	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUL54_RS10510	COG2002	toxin-antitoxin pair type II binding
AUL54_RS10515	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AUL54_RS10525	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AUL54_RS10535	COG1774	PSP1 C-terminal conserved region
AUL54_RS10540	COG0470	DNA polymerase III
AUL54_RS10545	COG1728	Protein conserved in bacteria
AUL54_RS10550	COG3870	Protein conserved in bacteria
AUL54_RS10560	COG1982	Orn Lys Arg decarboxylase major
AUL54_RS10565	COG3853	Toxic anion resistance protein (TelA)
AUL54_RS10570	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
AUL54_RS10620	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AUL54_RS10625	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AUL54_RS10635	COG0590	tRNA wobble adenosine to inosine editing
AUL54_RS10640	COG1335	isochorismatase
AUL54_RS10645	COG3858	chitin binding
AUL54_RS10645	COG1388	LysM domain
AUL54_RS10650	COG1428	Deoxynucleoside kinase
AUL54_RS10655	COG1428	Deoxynucleoside kinase
AUL54_RS10685	COG1686	Belongs to the peptidase S11 family
AUL54_RS10690	COG0516	GMP reductase activity
AUL54_RS10690	COG0517	IMP dehydrogenase activity
AUL54_RS10725	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AUL54_RS10730	COG0187	DNA topoisomerase II activity
AUL54_RS10745	COG2501	S4 domain
AUL54_RS10750	COG0592	DNA-directed DNA polymerase activity
AUL54_RS10765	COG0706	membrane insertase activity
AUL54_RS10770	COG1847	R3H domain protein
AUL54_RS10795	COG1192	Involved in chromosome partitioning
AUL54_RS10800	COG1475	DNA binding
AUL54_RS10815	COG3949	Membrane
AUL54_RS10820	COG4481	Protein conserved in bacteria
AUL54_RS10825	COG0243	molybdopterin cofactor binding
AUL54_RS10830	COG0012	GTP binding
AUL54_RS10840	COG0629	single-stranded DNA binding
AUL54_RS10850	COG2169	Transcriptional regulator
AUL54_RS10855	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AUL54_RS10860	COG0708	Exodeoxyribonuclease III
AUL54_RS10865	COG1609	Transcriptional regulator
AUL54_RS10870	COG0346	lactoylglutathione lyase activity
AUL54_RS10875	COG0477	Major facilitator Superfamily
AUL54_RS10875	COG2814	Major facilitator Superfamily
AUL54_RS10880	COG1266	CAAX protease self-immunity
AUL54_RS10885	COG1331	Highly conserved protein containing a thioredoxin domain
AUL54_RS10890	COG2195	Cleaves the N-terminal amino acid of tripeptides
AUL54_RS10900	COG1131	(ABC) transporter
AUL54_RS10930	COG1078	dGTPase activity
AUL54_RS10935	COG0697	spore germination
AUL54_RS10940	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AUL54_RS10945	COG2153	protein acetylation
AUL54_RS10950	COG1846	Transcriptional regulator
AUL54_RS10955	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUL54_RS10960	COG1846	Transcriptional regulator
AUL54_RS10965	COG0778	Nitroreductase
AUL54_RS10975	COG0583	DNA-binding transcription factor activity
AUL54_RS10980	COG2211	Major facilitator Superfamily
AUL54_RS10985	COG2318	DinB family
AUL54_RS10990	COG1802	Transcriptional regulator
AUL54_RS10995	COG1621	beta-fructofuranosidase activity
AUL54_RS11000	COG1621	beta-fructofuranosidase activity
AUL54_RS11005	COG0697	spore germination
AUL54_RS11015	COG1733	regulation of RNA biosynthetic process
AUL54_RS11020	COG5577	PFAM Coat F domain
AUL54_RS11025	COG4241	membrane
AUL54_RS11030	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
AUL54_RS11050	COG0438	transferase activity, transferring glycosyl groups
AUL54_RS11055	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AUL54_RS11065	COG0438	transferase activity, transferring glycosyl groups
AUL54_RS11080	COG0305	Participates in initiation and elongation during chromosome replication
AUL54_RS11085	COG0346	lactoylglutathione lyase activity
AUL54_RS11120	COG0745	RESPONSE REGULATOR receiver
AUL54_RS11125	COG5002	protein histidine kinase activity
AUL54_RS11130	COG4863	YycH protein
AUL54_RS11135	COG4853	Protein conserved in bacteria
AUL54_RS11140	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AUL54_RS11145	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AUL54_RS11160	COG3829	transcription factor binding
AUL54_RS11165	COG0640	Transcriptional regulator
AUL54_RS11170	COG5658	integral membrane protein
AUL54_RS11175	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AUL54_RS11180	COG0833	amino acid
AUL54_RS11185	COG0010	Belongs to the arginase family
AUL54_RS11190	COG0457	Tetratricopeptide repeat
AUL54_RS11195	COG0456	acetyltransferase
AUL54_RS11200	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
AUL54_RS11255	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AUL54_RS11260	COG2068	MobA-Related Protein
AUL54_RS11275	COG2080	2 iron, 2 sulfur cluster binding
AUL54_RS11285	COG1113	amino acid transport
AUL54_RS11290	COG3634	alkyl hydroperoxide reductase activity
AUL54_RS11295	COG0450	alkyl hydroperoxide reductase
AUL54_RS11305	COG1714	RDD family
AUL54_RS11310	COG2814	Major facilitator Superfamily
AUL54_RS11315	COG0640	Transcriptional regulator
AUL54_RS11325	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AUL54_RS11330	COG1012	belongs to the aldehyde dehydrogenase family
AUL54_RS11335	COG1309	transcriptional regulator
AUL54_RS11340	COG3239	Fatty acid desaturase
AUL54_RS11345	COG4585	Histidine kinase
AUL54_RS11350	COG2197	response regulator
AUL54_RS11355	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS11370	COG2814	Major facilitator Superfamily
AUL54_RS11375	COG0667	Aldo Keto reductase
AUL54_RS11380	COG1349	DNA-binding transcription factor activity
AUL54_RS11415	COG1082	Xylose isomerase domain protein TIM barrel
AUL54_RS11425	COG0191	fructose-bisphosphate aldolase activity
AUL54_RS11430	COG0745	RESPONSE REGULATOR receiver
AUL54_RS11435	COG2205	protein histidine kinase activity
AUL54_RS11440	COG1136	(ABC) transporter
AUL54_RS11445	COG0577	efflux transmembrane transporter activity
AUL54_RS11450	COG5294	Protein conserved in bacteria
AUL54_RS11455	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AUL54_RS11485	COG0561	phosphatase activity
AUL54_RS11490	COG2390	Transcriptional regulator
AUL54_RS11500	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AUL54_RS11505	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AUL54_RS11525	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AUL54_RS11525	COG2190	(PTS) system
AUL54_RS11525	COG1263	PTS System
AUL54_RS11530	COG2723	6-phospho-beta-galactosidase activity
AUL54_RS11535	COG0589	response to stress
AUL54_RS11540	COG0697	spore germination
AUL54_RS11550	COG3209	COG3209 Rhs family protein
AUL54_RS11630	COG0513	Belongs to the DEAD box helicase family
AUL54_RS11635	COG2270	Major facilitator Superfamily
AUL54_RS11640	COG3711	transcriptional antiterminator
AUL54_RS11645	COG2273	Hydrolase Family 16
AUL54_RS11650	COG2851	Citrate transporter
AUL54_RS11655	COG0693	protein deglycase activity
AUL54_RS11655	COG0753	catalase activity
AUL54_RS11670	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AUL54_RS11675	COG0500	methyltransferase
AUL54_RS11680	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AUL54_RS11685	COG4894	glucomannan catabolic process
AUL54_RS11695	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AUL54_RS11705	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUL54_RS11710	COG2508	Transcriptional regulator
AUL54_RS11715	COG3842	ATPase activity
AUL54_RS11720	COG0726	polysaccharide deacetylase
AUL54_RS11725	COG3493	citrate carrier protein
AUL54_RS11730	COG1271	oxidase subunit
AUL54_RS11735	COG1294	oxidase, subunit
AUL54_RS11740	COG4988	ABC transporter
AUL54_RS11745	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AUL54_RS11750	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AUL54_RS11755	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AUL54_RS11760	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
AUL54_RS11765	COG0753	catalase activity
AUL54_RS11770	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AUL54_RS11775	COG0640	Transcriptional regulator
AUL54_RS11780	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AUL54_RS11785	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AUL54_RS11790	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AUL54_RS11800	COG3711	transcriptional antiterminator
AUL54_RS11800	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AUL54_RS11805	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AUL54_RS11810	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AUL54_RS11815	COG1447	Phosphotransferase system cellobiose-specific component IIA
AUL54_RS11820	COG1486	melibiose metabolic process
AUL54_RS11845	COG1012	belongs to the aldehyde dehydrogenase family
AUL54_RS11855	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AUL54_RS11860	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AUL54_RS11870	COG1696	Membrane protein involved in D-alanine export
AUL54_RS11885	COG1575	Belongs to the MenA family. Type 1 subfamily
AUL54_RS11890	COG2357	RelA SpoT domain protein
AUL54_RS11895	COG1442	glycosyl transferase family 8
AUL54_RS11900	COG1404	Belongs to the peptidase S8 family
AUL54_RS11905	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AUL54_RS11910	COG0346	lactoylglutathione lyase activity
AUL54_RS11915	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AUL54_RS11920	COG4895	conserved protein (DUF2196)
AUL54_RS11925	COG1346	cytolysis
AUL54_RS11935	COG0583	DNA-binding transcription factor activity
AUL54_RS11950	COG0672	)-iron permease
AUL54_RS11955	COG2822	iron ion transport
AUL54_RS11960	COG2837	iron assimilation
AUL54_RS11965	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AUL54_RS11975	COG2813	Specifically methylates the guanine in position
AUL54_RS11985	COG1309	transcriptional regulator
AUL54_RS11990	COG2246	polysaccharide biosynthetic process
AUL54_RS11995	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AUL54_RS12000	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
AUL54_RS12005	COG2261	transglycosylase associated protein
AUL54_RS12010	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AUL54_RS12015	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AUL54_RS12035	COG0454	-acetyltransferase
AUL54_RS12040	COG0772	Belongs to the SEDS family
AUL54_RS12045	COG0778	Nitroreductase
AUL54_RS12055	COG1404	Belongs to the peptidase S8 family
AUL54_RS12065	COG3711	transcriptional antiterminator
AUL54_RS12070	COG1263	PTS System
AUL54_RS12070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AUL54_RS12075	COG1621	beta-fructofuranosidase activity
AUL54_RS12085	COG0351	phosphomethylpyrimidine kinase
AUL54_RS12090	COG1695	Transcriptional regulator
AUL54_RS12105	COG1216	Glycosyl transferase, family 2
AUL54_RS12120	COG2233	PERMEase
AUL54_RS12125	COG2363	Small membrane protein
AUL54_RS12135	COG0463	Glycosyl transferase, family 2
AUL54_RS12140	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AUL54_RS12145	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AUL54_RS12150	COG0456	acetyltransferase
AUL54_RS12155	COG2089	acid synthase
AUL54_RS12160	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
AUL54_RS12165	COG3980	spore coat polysaccharide biosynthesis protein
AUL54_RS12170	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AUL54_RS12175	COG1088	dTDP-glucose 4,6-dehydratase activity
AUL54_RS12180	COG1091	dTDP-4-dehydrorhamnose reductase activity
AUL54_RS12185	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
AUL54_RS12190	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AUL54_RS12195	COG1012	belongs to the aldehyde dehydrogenase family
AUL54_RS12200	COG4187	Peptidase family M20/M25/M40
AUL54_RS12205	COG0833	amino acid
AUL54_RS12210	COG2814	Major facilitator Superfamily
AUL54_RS12215	COG2814	Major facilitator Superfamily
AUL54_RS12245	COG0436	Aminotransferase
AUL54_RS12250	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS12260	COG0280	phosphate acetyltransferase
AUL54_RS12265	COG2855	membrane
AUL54_RS12270	COG0583	DNA-binding transcription factor activity
AUL54_RS12300	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AUL54_RS12305	COG1131	(ABC) transporter
AUL54_RS12315	COG1695	Transcriptional regulator
AUL54_RS12330	COG1078	dGTPase activity
AUL54_RS12335	COG3465	dGTPase activity
AUL54_RS12340	COG0531	amino acid
AUL54_RS12345	COG1846	Transcriptional regulator
AUL54_RS12350	COG1942	4-Oxalocrotonate Tautomerase
AUL54_RS12355	COG1994	Peptidase M50
AUL54_RS12370	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AUL54_RS12375	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
AUL54_RS12380	COG0010	Belongs to the arginase family
AUL54_RS12385	COG0457	Tetratricopeptide repeat
AUL54_RS12390	COG4506	Protein conserved in bacteria
AUL54_RS12400	COG2223	nitrite transmembrane transporter activity
AUL54_RS12405	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AUL54_RS12415	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AUL54_RS12420	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AUL54_RS12425	COG1140	nitrate reductase beta subunit
AUL54_RS12430	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AUL54_RS12435	COG2181	nitrate reductase activity
AUL54_RS12445	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AUL54_RS12450	COG1132	(ABC) transporter
AUL54_RS12465	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AUL54_RS12470	COG0247	lactate metabolic process
AUL54_RS12470	COG2181	nitrate reductase activity
AUL54_RS12485	COG4821	SIS domain
AUL54_RS12490	COG2204	response regulator
AUL54_RS12495	COG0191	fructose-bisphosphate aldolase activity
AUL54_RS12505	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AUL54_RS12510	COG1494	fructose-1,6-bisphosphatase
AUL54_RS12520	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AUL54_RS12535	COG0281	malic enzyme
AUL54_RS12540	COG0679	Auxin Efflux Carrier
AUL54_RS12545	COG0789	Transcriptional regulator
AUL54_RS12550	COG0346	lactoylglutathione lyase activity
AUL54_RS12555	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AUL54_RS12560	COG2890	protein-(glutamine-N5) methyltransferase activity
AUL54_RS12580	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AUL54_RS12585	COG0009	L-threonylcarbamoyladenylate synthase
AUL54_RS12595	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AUL54_RS12600	COG0698	ribose 5-phosphate isomerase
AUL54_RS12670	COG4836	Membrane
AUL54_RS12680	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AUL54_RS12685	COG2385	sporulation resulting in formation of a cellular spore
AUL54_RS12690	COG2304	oxidoreductase activity
AUL54_RS12695	COG2304	oxidoreductase activity
AUL54_RS12700	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AUL54_RS12710	COG0457	Tetratricopeptide repeat
AUL54_RS12715	COG1994	Peptidase M50
AUL54_RS12720	COG3237	CsbD-like
AUL54_RS12725	COG0831	urea catabolic process
AUL54_RS12740	COG1959	2 iron, 2 sulfur cluster binding
AUL54_RS12745	COG0726	polysaccharide deacetylase
AUL54_RS12755	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AUL54_RS12770	COG1247	-acetyltransferase
AUL54_RS12775	COG0739	heme binding
AUL54_RS12785	COG0671	phosphoesterase, PA-phosphatase related
AUL54_RS12790	COG0772	Belongs to the SEDS family
AUL54_RS12795	COG0347	Belongs to the P(II) protein family
AUL54_RS12800	COG0004	ammonium transporteR
AUL54_RS12805	COG1335	isochorismatase
AUL54_RS12810	COG0477	Major facilitator Superfamily
AUL54_RS12815	COG1953	Uracil, thiamine, allantoin
AUL54_RS12820	COG2814	Major facilitator Superfamily
AUL54_RS12825	COG1846	Transcriptional regulator
AUL54_RS12830	COG1609	Transcriptional regulator
AUL54_RS12835	COG1077	Cell shape determining protein MreB Mrl
AUL54_RS12840	COG4786	Flagellar basal body rod
AUL54_RS12845	COG4786	Flagellar basal body rod
AUL54_RS12850	COG0457	Tetratricopeptide repeat
AUL54_RS12880	COG1349	DNA-binding transcription factor activity
AUL54_RS12885	COG0561	phosphatase activity
AUL54_RS12890	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AUL54_RS12895	COG4715	Zinc finger, swim domain protein
AUL54_RS12905	COG3944	biosynthesis protein
AUL54_RS12910	COG0489	protein tyrosine kinase activity
AUL54_RS12915	COG4464	protein tyrosine phosphatase activity
AUL54_RS12920	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AUL54_RS12935	COG5444	nuclease activity
AUL54_RS12955	COG2059	Chromate
AUL54_RS12960	COG2059	Chromate
AUL54_RS12965	COG1522	sequence-specific DNA binding
AUL54_RS12970	COG0405	Gamma-glutamyltransferase
AUL54_RS12980	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AUL54_RS12990	COG5337	Spore coat protein CotH
AUL54_RS13005	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AUL54_RS13010	COG0583	DNA-binding transcription factor activity
AUL54_RS13015	COG0028	Belongs to the TPP enzyme family
AUL54_RS13020	COG3527	Alpha-acetolactate decarboxylase
AUL54_RS13025	COG2249	NAD(P)H dehydrogenase (quinone) activity
AUL54_RS13030	COG3103	Sh3 type 3 domain protein
AUL54_RS13035	COG1879	ABC-type sugar transport system periplasmic component
AUL54_RS13040	COG1172	Belongs to the binding-protein-dependent transport system permease family
AUL54_RS13045	COG1129	ABC transporter
AUL54_RS13055	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AUL54_RS13060	COG1609	Transcriptional regulator
AUL54_RS13070	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AUL54_RS13080	COG2843	Capsule synthesis protein
AUL54_RS13085	COG0791	NLP P60 protein
AUL54_RS13090	COG2433	Pfam Transposase IS66
AUL54_RS13095	COG0561	phosphatase activity
AUL54_RS13100	COG1316	TRANSCRIPTIONal
AUL54_RS13105	COG2814	Major facilitator Superfamily
AUL54_RS13110	COG0463	Glycosyl transferase, family 2
AUL54_RS13120	COG0814	amino acid
AUL54_RS13125	COG0697	spore germination
AUL54_RS13130	COG1482	cell wall glycoprotein biosynthetic process
AUL54_RS13135	COG4193	domain, Protein
AUL54_RS13140	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AUL54_RS13145	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
AUL54_RS13150	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AUL54_RS13160	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AUL54_RS13165	COG1682	transport, permease protein
AUL54_RS13170	COG1134	teichoic acid transport
AUL54_RS13175	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AUL54_RS13180	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AUL54_RS13185	COG1316	TRANSCRIPTIONal
AUL54_RS13195	COG2385	sporulation resulting in formation of a cellular spore
AUL54_RS13195	COG2247	cell wall binding repeat
AUL54_RS13200	COG2247	cell wall binding repeat
AUL54_RS13200	COG0860	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS13210	COG2244	polysaccharide biosynthetic process
AUL54_RS13215	COG0438	transferase activity, transferring glycosyl groups
AUL54_RS13215	COG0297	glycogen (starch) synthase activity
AUL54_RS13220	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AUL54_RS13225	COG3307	-O-antigen
AUL54_RS13230	COG3206	protein involved in exopolysaccharide biosynthesis
AUL54_RS13235	COG1215	transferase activity, transferring glycosyl groups
AUL54_RS13240	COG0438	transferase activity, transferring glycosyl groups
AUL54_RS13245	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AUL54_RS13250	COG1316	TRANSCRIPTIONal
AUL54_RS13255	COG1739	Uncharacterized protein family UPF0029
AUL54_RS13260	COG4585	Histidine kinase
AUL54_RS13265	COG2197	response regulator
AUL54_RS13270	COG1307	EDD domain protein, DegV family
AUL54_RS13275	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
AUL54_RS13285	COG1040	competence protein
AUL54_RS13295	COG2747	anti-sigma28 factor FlgM
AUL54_RS13300	COG3418	PFAM FlgN family protein
AUL54_RS13305	COG1256	bacterial-type flagellum assembly
AUL54_RS13305	COG4786	Flagellar basal body rod
AUL54_RS13310	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AUL54_RS13330	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AUL54_RS13335	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
AUL54_RS13340	COG1516	flagellar protein fliS
AUL54_RS13355	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AUL54_RS13365	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AUL54_RS13370	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUL54_RS13375	COG2010	Cytochrome c
AUL54_RS13380	COG2884	Cell division ATP-binding protein ftsE
AUL54_RS13385	COG2177	Part of the ABC transporter FtsEX involved in
AUL54_RS13390	COG3420	alginic acid biosynthetic process
AUL54_RS13395	COG0793	Belongs to the peptidase S41A family
AUL54_RS13395	COG3409	Peptidoglycan-binding domain 1 protein
AUL54_RS13405	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AUL54_RS13415	COG2814	Major facilitator Superfamily
AUL54_RS13420	COG1309	transcriptional regulator
AUL54_RS13425	COG0574	Belongs to the PEP-utilizing enzyme family
AUL54_RS13425	COG3848	Pyruvate phosphate dikinase
AUL54_RS13430	COG4897	Protein conserved in bacteria
AUL54_RS13440	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AUL54_RS13455	COG3595	metallopeptidase activity
AUL54_RS13460	COG1983	PspC domain protein
AUL54_RS13465	COG1950	PFAM Membrane protein of
AUL54_RS13470	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AUL54_RS13475	COG1309	transcriptional regulator
AUL54_RS13480	COG2188	Transcriptional regulator
AUL54_RS13490	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AUL54_RS13510	COG0110	maltose O-acetyltransferase activity
AUL54_RS13515	COG4990	cell redox homeostasis
AUL54_RS13530	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AUL54_RS13555	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AUL54_RS13555	COG0140	phosphoribosyl-ATP diphosphatase activity
AUL54_RS13560	COG1132	(ABC) transporter
AUL54_RS13570	COG0745	RESPONSE REGULATOR receiver
AUL54_RS13575	COG5002	protein histidine kinase activity
AUL54_RS13580	COG0457	Tetratricopeptide repeat
AUL54_RS13590	COG3883	PFAM NLP P60 protein
AUL54_RS13590	COG0791	NLP P60 protein
AUL54_RS13595	COG0492	ferredoxin-NADP+ reductase activity
AUL54_RS13600	COG1051	belongs to the nudix hydrolase family
AUL54_RS13610	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AUL54_RS13620	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AUL54_RS13625	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AUL54_RS13630	COG4290	ribonuclease
AUL54_RS13635	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AUL54_RS13640	COG0288	reversible hydration of carbon dioxide
AUL54_RS13645	COG0659	secondary active sulfate transmembrane transporter activity
AUL54_RS13650	COG1694	Mazg nucleotide pyrophosphohydrolase
AUL54_RS13655	COG1611	Belongs to the LOG family
AUL54_RS13665	COG2814	Major facilitator Superfamily
AUL54_RS13665	COG0477	Major facilitator Superfamily
AUL54_RS13670	COG2828	Protein conserved in bacteria
AUL54_RS13675	COG0583	DNA-binding transcription factor activity
AUL54_RS13685	COG1609	Transcriptional regulator
AUL54_RS13755	COG3479	Phenolic acid decarboxylase
AUL54_RS13760	COG0456	acetyltransferase
AUL54_RS13765	COG2364	Membrane
AUL54_RS13770	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AUL54_RS13780	COG2272	Belongs to the type-B carboxylesterase lipase family
AUL54_RS13785	COG1396	sequence-specific DNA binding
AUL54_RS13790	COG3944	biosynthesis protein
AUL54_RS13795	COG0489	protein tyrosine kinase activity
AUL54_RS13800	COG1086	Polysaccharide biosynthesis protein
AUL54_RS13805	COG0438	transferase activity, transferring glycosyl groups
AUL54_RS13810	COG1215	transferase activity, transferring glycosyl groups
AUL54_RS13815	COG0438	transferase activity, transferring glycosyl groups
AUL54_RS13825	COG1216	Glycosyl transferase, family 2
AUL54_RS13830	COG5039	Polysaccharide pyruvyl transferase
AUL54_RS13835	COG1216	Glycosyl transferase, family 2
AUL54_RS13840	COG2244	polysaccharide biosynthetic process
AUL54_RS13845	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AUL54_RS13850	COG0110	maltose O-acetyltransferase activity
AUL54_RS13855	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AUL54_RS13860	COG5039	Polysaccharide pyruvyl transferase
AUL54_RS13870	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AUL54_RS13875	COG1620	l-lactate permease
AUL54_RS13880	COG2186	Transcriptional regulator
AUL54_RS13885	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AUL54_RS13910	COG1070	Carbohydrate kinase
AUL54_RS13915	COG1737	Transcriptional regulator
AUL54_RS13920	COG1113	amino acid transport
AUL54_RS13930	COG2801	Transposase and inactivated derivatives
AUL54_RS13935	COG0697	spore germination
AUL54_RS13940	COG0583	DNA-binding transcription factor activity
AUL54_RS13950	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AUL54_RS13955	COG1609	Transcriptional regulator
AUL54_RS13960	COG2814	Major facilitator Superfamily
AUL54_RS13965	COG2390	Transcriptional regulator
AUL54_RS13970	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AUL54_RS13975	COG0126	phosphoglycerate kinase activity
AUL54_RS13995	COG0456	acetyltransferase
AUL54_RS14000	COG4640	response to antibiotic
AUL54_RS14005	COG3064	Membrane
AUL54_RS14015	COG2095	MarC family integral membrane protein
AUL54_RS14020	COG1510	regulation of RNA biosynthetic process
AUL54_RS14025	COG1125	glycine betaine transport
AUL54_RS14025	COG0517	IMP dehydrogenase activity
AUL54_RS14030	COG1174	glycine betaine transport
AUL54_RS14035	COG1732	Glycine betaine
AUL54_RS14040	COG1174	glycine betaine transport
AUL54_RS14045	COG1510	regulation of RNA biosynthetic process
AUL54_RS14050	COG1125	glycine betaine transport
AUL54_RS14050	COG0517	IMP dehydrogenase activity
AUL54_RS14060	COG1732	Glycine betaine
AUL54_RS14065	COG1174	glycine betaine transport
AUL54_RS14070	COG1131	(ABC) transporter
AUL54_RS14095	COG1733	regulation of RNA biosynthetic process
AUL54_RS14100	COG1396	sequence-specific DNA binding
AUL54_RS14105	COG1396	sequence-specific DNA binding
AUL54_RS14110	COG1476	TRANSCRIPTIONal
AUL54_RS14115	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AUL54_RS14120	COG1647	Serine aminopeptidase, S33
AUL54_RS14125	COG0557	exoribonuclease II activity
AUL54_RS14160	COG2732	(Barnase) inhibitor
AUL54_RS14165	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS14170	COG0583	DNA-binding transcription factor activity
AUL54_RS14175	COG0454	-acetyltransferase
AUL54_RS14180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUL54_RS14185	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUL54_RS14190	COG0765	amino acid transport
AUL54_RS14195	COG0765	amino acid transport
AUL54_RS14200	COG1126	abc transporter atp-binding protein
AUL54_RS14205	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AUL54_RS14210	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AUL54_RS14215	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AUL54_RS14230	COG2814	Major facilitator Superfamily
AUL54_RS14245	COG0673	inositol 2-dehydrogenase activity
AUL54_RS14250	COG1937	Protein conserved in bacteria
AUL54_RS14255	COG2608	mercury ion transmembrane transporter activity
AUL54_RS14260	COG2217	Heavy metal translocating P-type atpase
AUL54_RS14265	COG2217	Heavy metal translocating P-type atpase
AUL54_RS14270	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AUL54_RS14275	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AUL54_RS14285	COG2860	membrane
AUL54_RS14290	COG3973	AAA domain
AUL54_RS14295	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AUL54_RS14315	COG0656	L-ascorbic acid biosynthetic process
AUL54_RS14320	COG0842	Transport permease protein
AUL54_RS14330	COG1131	(ABC) transporter
AUL54_RS14335	COG3850	Histidine kinase
AUL54_RS14340	COG2197	response regulator
AUL54_RS14345	COG4149	molybdate abc transporter
AUL54_RS14350	COG0725	ABC transporter, periplasmic molybdate-binding protein
AUL54_RS14355	COG1910	domain protein
AUL54_RS14360	COG1368	sulfuric ester hydrolase activity
AUL54_RS14365	COG1988	membrane-bound metal-dependent
AUL54_RS14375	COG0531	amino acid
AUL54_RS14380	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AUL54_RS14385	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AUL54_RS14390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AUL54_RS14395	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AUL54_RS14400	COG1120	ATPase activity
AUL54_RS14410	COG2140	Oxalate decarboxylase
AUL54_RS14415	COG1191	sigma factor activity
AUL54_RS14425	COG0745	RESPONSE REGULATOR receiver
AUL54_RS14430	COG2205	protein histidine kinase activity
AUL54_RS14435	COG3386	PFAM SMP-30 Gluconolaconase
AUL54_RS14440	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS14445	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AUL54_RS14450	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AUL54_RS14455	COG1120	ATPase activity
AUL54_RS14460	COG2096	Adenosyltransferase
AUL54_RS14465	COG2814	Major facilitator Superfamily
AUL54_RS14470	COG4758	membrane
AUL54_RS14475	COG1842	Phage shock protein A
AUL54_RS14480	COG3595	metallopeptidase activity
AUL54_RS14485	COG4758	membrane
AUL54_RS14490	COG4585	Histidine kinase
AUL54_RS14495	COG2197	response regulator
AUL54_RS14505	COG0814	amino acid
AUL54_RS14510	COG0697	spore germination
AUL54_RS14520	COG0114	fumarate hydratase activity
AUL54_RS14525	COG1309	transcriptional regulator
AUL54_RS14530	COG2205	protein histidine kinase activity
AUL54_RS14530	COG2770	Histidine kinase
AUL54_RS14535	COG0745	RESPONSE REGULATOR receiver
AUL54_RS14540	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AUL54_RS14545	COG0783	Belongs to the Dps family
AUL54_RS14550	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS14565	COG1120	ATPase activity
AUL54_RS14580	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS14585	COG1942	4-Oxalocrotonate Tautomerase
AUL54_RS14590	COG0477	Major facilitator Superfamily
AUL54_RS14595	COG1846	Transcriptional regulator
AUL54_RS14600	COG5577	PFAM Coat F domain
AUL54_RS14620	COG1250	3-hydroxyacyl-CoA dehydrogenase
AUL54_RS14620	COG1024	Enoyl-CoA hydratase
AUL54_RS14625	COG0183	Belongs to the thiolase family
AUL54_RS14630	COG1960	acyl-CoA dehydrogenase activity
AUL54_RS14635	COG1393	Belongs to the ArsC family
AUL54_RS14650	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AUL54_RS14655	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AUL54_RS14665	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AUL54_RS14670	COG2011	ABC-type metal ion transport system permease component
AUL54_RS14675	COG1464	Belongs to the NlpA lipoprotein family
AUL54_RS14680	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AUL54_RS14685	COG0396	ATPase activity
AUL54_RS14690	COG0719	Fe-S assembly protein
AUL54_RS14695	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AUL54_RS14700	COG0822	iron-sulfur transferase activity
AUL54_RS14705	COG0719	Fe-S assembly protein
AUL54_RS14745	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AUL54_RS14760	COG2323	membrane
AUL54_RS14765	COG5444	nuclease activity
AUL54_RS14790	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AUL54_RS14795	COG0322	excinuclease ABC activity
AUL54_RS14820	COG0789	Transcriptional regulator
AUL54_RS14825	COG2222	sugar isomerase
AUL54_RS14830	COG1653	transport
AUL54_RS14835	COG1175	transmembrane transport
AUL54_RS14840	COG0395	ABC-type sugar transport system, permease component
AUL54_RS14845	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AUL54_RS14850	COG2188	Transcriptional regulator
AUL54_RS14855	COG3842	ATPase activity
AUL54_RS14860	COG1116	anion transmembrane transporter activity
AUL54_RS14865	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AUL54_RS14870	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AUL54_RS14880	COG2356	endonuclease I
AUL54_RS14885	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AUL54_RS14890	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AUL54_RS14895	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AUL54_RS14900	COG2068	MobA-Related Protein
AUL54_RS14910	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AUL54_RS14915	COG2080	2 iron, 2 sulfur cluster binding
AUL54_RS14920	COG1794	racemase activity, acting on amino acids and derivatives
AUL54_RS14925	COG2351	hydroxyisourate hydrolase activity
AUL54_RS14930	COG3195	allantoin biosynthetic process
AUL54_RS14930	COG3648	Uricase
AUL54_RS14935	COG2233	PERMEase
AUL54_RS14940	COG2233	PERMEase
AUL54_RS14945	COG2508	Transcriptional regulator
AUL54_RS14950	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AUL54_RS14960	COG1801	Protein of unknown function DUF72
AUL54_RS14965	COG0730	response to heat
AUL54_RS14970	COG0737	Belongs to the 5'-nucleotidase family
AUL54_RS14980	COG0739	heme binding
AUL54_RS14990	COG4470	Protein conserved in bacteria
AUL54_RS14995	COG2445	Protein of unknown function DUF86
AUL54_RS15000	COG0647	UMP catabolic process
AUL54_RS15005	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AUL54_RS15010	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AUL54_RS15015	COG0460	homoserine dehydrogenase
AUL54_RS15020	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AUL54_RS15030	COG1506	peptidase
AUL54_RS15030	COG0823	Involved in the tonB-independent uptake of proteins
AUL54_RS15030	COG4946	Tricorn protease homolog
AUL54_RS15035	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AUL54_RS15040	COG4837	Protein of unknown function (DUF1462)
AUL54_RS15045	COG1252	NADH dehydrogenase
AUL54_RS15055	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AUL54_RS15065	COG0316	Belongs to the HesB IscA family
AUL54_RS15070	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
AUL54_RS15095	COG1131	(ABC) transporter
AUL54_RS15125	COG1252	NADH dehydrogenase
AUL54_RS15135	COG3584	3D domain protein
AUL54_RS15140	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
AUL54_RS15150	COG2056	Na+-H+ antiporter family
AUL54_RS15155	COG1268	BioY protein
AUL54_RS15160	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AUL54_RS15165	COG2819	hydrolase of the alpha beta superfamily
AUL54_RS15170	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS15175	COG1169	isochorismate synthase
AUL54_RS15180	COG1021	2,3-dihydroxybenzoate-AMP ligase
AUL54_RS15185	COG3433	isochorismatase activity
AUL54_RS15185	COG1535	isochorismatase
AUL54_RS15190	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS15195	COG3251	PFAM MbtH domain protein
AUL54_RS15200	COG5634	Uncharacterized conserved protein (DUF2278)
AUL54_RS15205	COG0686	Belongs to the AlaDH PNT family
AUL54_RS15210	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
AUL54_RS15210	COG2508	Transcriptional regulator
AUL54_RS15215	COG4842	Belongs to the WXG100 family
AUL54_RS15220	COG5417	Belongs to the EsaB family
AUL54_RS15225	COG4499	WXG100 protein secretion system (Wss), protein YukC
AUL54_RS15230	COG0433	COG0433 Predicted ATPase
AUL54_RS15230	COG1674	ftsk spoiiie
AUL54_RS15235	COG1511	domain protein
AUL54_RS15245	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS15250	COG1418	mRNA catabolic process
AUL54_RS15260	COG0628	permease
AUL54_RS15275	COG5506	Protein of unknown function (DUF1694)
AUL54_RS15280	COG1335	isochorismatase
AUL54_RS15285	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AUL54_RS15290	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AUL54_RS15305	COG0142	geranyltranstransferase activity
AUL54_RS15315	COG4585	Histidine kinase
AUL54_RS15320	COG2197	response regulator
AUL54_RS15325	COG2050	protein possibly involved in aromatic compounds catabolism
AUL54_RS15330	COG1320	monovalent cation:proton antiporter activity
AUL54_RS15335	COG2212	antiporter activity
AUL54_RS15340	COG1863	multisubunit Na H antiporter MnhE subunit
AUL54_RS15345	COG0651	ATP synthesis coupled electron transport
AUL54_RS15350	COG1006	Multisubunit Na H antiporter MnhC subunit
AUL54_RS15355	COG2111	Na H antiporter
AUL54_RS15360	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AUL54_RS15360	COG2111	Na H antiporter
AUL54_RS15370	COG1079	Belongs to the binding-protein-dependent transport system permease family
AUL54_RS15375	COG4603	Belongs to the binding-protein-dependent transport system permease family
AUL54_RS15380	COG3845	ABC transporter
AUL54_RS15385	COG1744	ABC transporter substrate-binding protein PnrA-like
AUL54_RS15390	COG4565	transcriptional regulatory protein
AUL54_RS15395	COG3290	protein histidine kinase activity
AUL54_RS15405	COG3011	Protein conserved in bacteria
AUL54_RS15410	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AUL54_RS15415	COG2814	Major facilitator Superfamily
AUL54_RS15420	COG5018	Exonuclease
AUL54_RS15430	COG2205	protein histidine kinase activity
AUL54_RS15435	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AUL54_RS15445	COG2267	carboxylic ester hydrolase activity
AUL54_RS15450	COG1522	sequence-specific DNA binding
AUL54_RS15455	COG0436	Aminotransferase
AUL54_RS15460	COG1098	S1 RNA binding domain
AUL54_RS15465	COG2155	Conserved Protein
AUL54_RS15470	COG1979	alcohol dehydrogenase
AUL54_RS15475	COG1979	alcohol dehydrogenase
AUL54_RS15480	COG1335	isochorismatase
AUL54_RS15505	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AUL54_RS15520	COG2738	Putative neutral zinc metallopeptidase
AUL54_RS15525	COG1253	flavin adenine dinucleotide binding
AUL54_RS15530	COG0366	Alpha amylase catalytic
AUL54_RS15535	COG0432	Pfam Uncharacterised protein family UPF0047
AUL54_RS15540	COG2070	2-Nitropropane dioxygenase
AUL54_RS15555	COG0840	transmembrane signaling receptor activity
AUL54_RS15560	COG0840	transmembrane signaling receptor activity
AUL54_RS15565	COG0840	transmembrane signaling receptor activity
AUL54_RS15570	COG0840	transmembrane signaling receptor activity
AUL54_RS15575	COG0693	protein deglycase activity
AUL54_RS15580	COG0673	inositol 2-dehydrogenase activity
AUL54_RS15585	COG0628	permease
AUL54_RS15610	COG0457	Tetratricopeptide repeat
AUL54_RS15630	COG1017	nitric oxide dioxygenase activity
AUL54_RS15630	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AUL54_RS15635	COG1705	Flagellar rod assembly protein muramidase FlgJ
AUL54_RS15640	COG0569	domain protein
AUL54_RS15650	COG1510	regulation of RNA biosynthetic process
AUL54_RS15655	COG1012	belongs to the aldehyde dehydrogenase family
AUL54_RS15660	COG1454	alcohol dehydrogenase
AUL54_RS15670	COG2318	DinB family
AUL54_RS15675	COG1585	Membrane protein implicated in regulation of membrane protease activity
AUL54_RS15685	COG3859	Proton-coupled thiamine transporter YuaJ
AUL54_RS15810	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
AUL54_RS15815	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AUL54_RS15820	COG1169	isochorismate synthase
AUL54_RS15830	COG0596	Alpha beta hydrolase
AUL54_RS15835	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AUL54_RS15845	COG4948	Mandelate Racemase Muconate Lactonizing
AUL54_RS15855	COG1294	oxidase, subunit
AUL54_RS15860	COG1271	oxidase subunit
AUL54_RS15870	COG0288	reversible hydration of carbon dioxide
AUL54_RS15895	COG0783	Belongs to the Dps family
AUL54_RS15900	COG4824	toxin secretion phage lysis holin
AUL54_RS15905	COG0494	nUDIX hydrolase
AUL54_RS15910	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AUL54_RS15915	COG1116	anion transmembrane transporter activity
AUL54_RS15920	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AUL54_RS15925	COG1506	peptidase
AUL54_RS15945	COG0367	asparagine synthase
AUL54_RS15950	COG1113	amino acid transport
AUL54_RS15955	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AUL54_RS15960	COG2267	carboxylic ester hydrolase activity
AUL54_RS15980	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AUL54_RS15985	COG1242	4 iron, 4 sulfur cluster binding
AUL54_RS15990	COG0477	Major facilitator Superfamily
AUL54_RS15995	COG0640	Transcriptional regulator
AUL54_RS16005	COG1725	Transcriptional regulator
AUL54_RS16010	COG1131	(ABC) transporter
AUL54_RS16030	COG1136	(ABC) transporter
AUL54_RS16035	COG0577	efflux transmembrane transporter activity
AUL54_RS16040	COG0745	RESPONSE REGULATOR receiver
AUL54_RS16045	COG2205	protein histidine kinase activity
AUL54_RS16050	COG1136	(ABC) transporter
AUL54_RS16055	COG0577	efflux transmembrane transporter activity
AUL54_RS16060	COG5522	Integral membrane protein (intg_mem_TP0381)
AUL54_RS16065	COG2814	Major facilitator Superfamily
AUL54_RS16070	COG1366	Belongs to the anti-sigma-factor antagonist family
AUL54_RS16070	COG2202	Pas domain
AUL54_RS16085	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AUL54_RS16105	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AUL54_RS16110	COG2081	HI0933 family
AUL54_RS16115	COG2244	polysaccharide biosynthetic process
AUL54_RS16120	COG1187	pseudouridine synthase activity
AUL54_RS16125	COG1349	DNA-binding transcription factor activity
AUL54_RS16130	COG1131	(ABC) transporter
AUL54_RS16135	COG4473	ABC transporter
AUL54_RS16140	COG2252	PERMEase
AUL54_RS16145	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AUL54_RS16150	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AUL54_RS16155	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AUL54_RS16165	COG1597	lipid kinase activity
AUL54_RS16170	COG0510	thiamine kinase activity
AUL54_RS16185	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AUL54_RS16190	COG0281	malic enzyme
AUL54_RS16195	COG5584	Small secreted protein
AUL54_RS16200	COG1363	Peptidase, m42
AUL54_RS16210	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AUL54_RS16220	COG2323	membrane
AUL54_RS16235	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AUL54_RS16270	COG0860	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS16315	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AUL54_RS16325	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUL54_RS16330	COG1674	ftsk spoiiie
AUL54_RS16340	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AUL54_RS16345	COG4980	gas vesicle protein
AUL54_RS16350	COG3118	belongs to the thioredoxin family
AUL54_RS16355	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AUL54_RS16355	COG1605	Chorismate mutase
AUL54_RS16360	COG1609	Transcriptional regulator
AUL54_RS16365	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AUL54_RS16370	COG1360	Flagellar Motor Protein
AUL54_RS16375	COG0123	including yeast histone deacetylase and acetoin utilization protein
AUL54_RS16380	COG0517	IMP dehydrogenase activity
AUL54_RS16385	COG0454	-acetyltransferase
AUL54_RS16390	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AUL54_RS16410	COG1378	Sugar-specific transcriptional regulator TrmB
AUL54_RS16415	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AUL54_RS16430	COG0693	protein deglycase activity
AUL54_RS16440	COG1017	nitric oxide dioxygenase activity
AUL54_RS16440	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AUL54_RS16465	COG4282	regulation of fungal-type cell wall biogenesis
AUL54_RS16470	COG1012	belongs to the aldehyde dehydrogenase family
AUL54_RS16480	COG2199	diguanylate cyclase activity
AUL54_RS16480	COG2203	Gaf domain
AUL54_RS16485	COG1956	GAF domain-containing protein
AUL54_RS16490	COG1309	transcriptional regulator
AUL54_RS16495	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AUL54_RS16505	COG1114	Component of the transport system for branched-chain amino acids
AUL54_RS16510	COG1104	cysteine desulfurase activity
AUL54_RS16525	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AUL54_RS16530	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AUL54_RS16535	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AUL54_RS16540	COG0616	signal peptide processing
AUL54_RS16545	COG1714	RDD family
AUL54_RS16555	COG3874	Sporulation protein YtfJ
AUL54_RS16560	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AUL54_RS16565	COG0827	DNA restriction-modification system
AUL54_RS16575	COG0521	Mo-molybdopterin cofactor biosynthetic process
AUL54_RS16590	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS16600	COG4109	DRTGG domain
AUL54_RS16610	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AUL54_RS16630	COG0587	DNA-directed DNA polymerase activity
AUL54_RS16635	COG0281	malic enzyme
AUL54_RS16655	COG0469	pyruvate kinase activity
AUL54_RS16660	COG3030	protein affecting phage T7 exclusion by the F plasmid
AUL54_RS16665	COG0628	permease
AUL54_RS16675	COG0372	Belongs to the citrate synthase family
AUL54_RS16680	COG0538	isocitrate dehydrogenase activity
AUL54_RS16690	COG0745	RESPONSE REGULATOR receiver
AUL54_RS16695	COG5002	protein histidine kinase activity
AUL54_RS16700	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AUL54_RS16700	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AUL54_RS16705	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AUL54_RS16710	COG1971	Probably functions as a manganese efflux pump
AUL54_RS16715	COG0237	dephospho-CoA kinase activity
AUL54_RS16720	COG0656	L-ascorbic acid biosynthetic process
AUL54_RS16725	COG2814	Major facilitator Superfamily
AUL54_RS16730	COG1733	regulation of RNA biosynthetic process
AUL54_RS16735	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AUL54_RS16750	COG3611	Membrane attachment protein
AUL54_RS16755	COG1484	DNA-dependent DNA replication
AUL54_RS16760	COG0398	Pfam SNARE associated Golgi protein
AUL54_RS16775	COG1011	Hydrolase
AUL54_RS16780	COG3275	phosphorelay sensor kinase activity
AUL54_RS16785	COG3279	Response regulator of the LytR AlgR family
AUL54_RS16790	COG1380	Effector of murein hydrolase LrgA
AUL54_RS16795	COG1346	cytolysis
AUL54_RS16800	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AUL54_RS16815	COG3326	Membrane
AUL54_RS16825	COG1363	Peptidase, m42
AUL54_RS16830	COG3507	Belongs to the glycosyl hydrolase 43 family
AUL54_RS16835	COG2160	L-arabinose isomerase activity
AUL54_RS16840	COG1069	ribulokinase activity
AUL54_RS16845	COG0235	Class ii aldolase
AUL54_RS16850	COG0647	UMP catabolic process
AUL54_RS16860	COG1653	transport
AUL54_RS16865	COG1175	transmembrane transport
AUL54_RS16870	COG0395	ABC-type sugar transport system, permease component
AUL54_RS16875	COG3534	alpha-L-arabinofuranosidase
AUL54_RS16880	COG1966	Carbon starvation protein
AUL54_RS16885	COG0247	lactate metabolic process
AUL54_RS16890	COG0277	FAD linked oxidase domain protein
AUL54_RS16895	COG3835	regulator
AUL54_RS16905	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AUL54_RS16910	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AUL54_RS16915	COG0072	phenylalanine-tRNA ligase activity
AUL54_RS16915	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUL54_RS16930	COG1286	toxin biosynthetic process
AUL54_RS16935	COG1796	DNA polymerase
AUL54_RS16935	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AUL54_RS16945	COG3766	membrane
AUL54_RS16955	COG0318	PFAM AMP-dependent synthetase and ligase
AUL54_RS16960	COG1309	transcriptional regulator
AUL54_RS16965	COG1024	Enoyl-CoA hydratase
AUL54_RS16970	COG2086	electron transfer activity
AUL54_RS16975	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AUL54_RS16980	COG3534	alpha-L-arabinofuranosidase
AUL54_RS16985	COG3118	belongs to the thioredoxin family
AUL54_RS16995	COG0527	aspartate kinase activity
AUL54_RS17000	COG1719	4-vinyl reductase, 4VR
AUL54_RS17005	COG2009	succinate dehydrogenase
AUL54_RS17010	COG1053	succinate dehydrogenase
AUL54_RS17015	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AUL54_RS17020	COG0824	Thioesterase
AUL54_RS17025	COG2197	response regulator
AUL54_RS17030	COG1846	Transcriptional regulator
AUL54_RS17040	COG5401	PFAM Sporulation and spore germination
AUL54_RS17050	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AUL54_RS17055	COG0622	Phosphoesterase
AUL54_RS17075	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
AUL54_RS17120	COG0028	Belongs to the TPP enzyme family
AUL54_RS17125	COG0440	acetolactate synthase activity
AUL54_RS17140	COG0473	3-isopropylmalate dehydrogenase activity
AUL54_RS17155	COG0457	Tetratricopeptide repeat
AUL54_RS17155	COG1477	protein flavinylation
AUL54_RS17170	COG0470	DNA polymerase III
AUL54_RS17170	COG1067	ATP-dependent peptidase activity
AUL54_RS17175	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AUL54_RS17195	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AUL54_RS17205	COG1587	Uroporphyrinogen-III synthase
AUL54_RS17210	COG0113	porphobilinogen synthase activity
AUL54_RS17220	COG1388	LysM domain
AUL54_RS17225	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AUL54_RS17235	COG0525	valine-tRNA ligase activity
AUL54_RS17240	COG0285	dihydrofolate synthase activity
AUL54_RS17245	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AUL54_RS17265	COG1077	Cell shape determining protein MreB Mrl
AUL54_RS17275	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AUL54_RS17285	COG2894	cell division
AUL54_RS17290	COG0739	heme binding
AUL54_RS17295	COG1994	Peptidase M50
AUL54_RS17305	COG2868	ribosomal protein
AUL54_RS17310	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AUL54_RS17315	COG3290	protein histidine kinase activity
AUL54_RS17330	COG0077	Prephenate dehydratase
AUL54_RS17335	COG1827	regulation of RNA biosynthetic process
AUL54_RS17340	COG1104	cysteine desulfurase activity
AUL54_RS17345	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AUL54_RS17350	COG0157	Belongs to the NadC ModD family
AUL54_RS17360	COG1388	LysM domain
AUL54_RS17400	COG1862	Preprotein translocase
AUL54_RS17410	COG2323	membrane
AUL54_RS17425	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AUL54_RS17425	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AUL54_RS17430	COG0490	domain, Protein
AUL54_RS17435	COG5416	Lipopolysaccharide assembly protein A domain
AUL54_RS17440	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AUL54_RS17440	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AUL54_RS17450	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AUL54_RS17455	COG1490	D-aminoacyl-tRNA deacylase activity
AUL54_RS17460	COG3103	Sh3 type 3 domain protein
AUL54_RS17460	COG0860	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS17460	COG4991	sh3 domain protein
AUL54_RS17480	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AUL54_RS17485	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AUL54_RS17490	COG1959	2 iron, 2 sulfur cluster binding
AUL54_RS17495	COG1104	cysteine desulfurase activity
AUL54_RS17505	COG0457	Tetratricopeptide repeat
AUL54_RS17510	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AUL54_RS17515	COG3881	PFAM PRC-barrel domain
AUL54_RS17525	COG0765	amino acid transport
AUL54_RS17530	COG0765	amino acid transport
AUL54_RS17535	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUL54_RS17540	COG1126	abc transporter atp-binding protein
AUL54_RS17545	COG0628	permease
AUL54_RS17555	COG4472	Bacterial protein of unknown function (DUF965)
AUL54_RS17570	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AUL54_RS17575	COG4122	O-methyltransferase activity
AUL54_RS17580	COG0826	peptidase U32
AUL54_RS17585	COG0826	peptidase U32
AUL54_RS17600	COG0768	penicillin binding
AUL54_RS17625	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AUL54_RS17630	COG0626	cystathionine gamma-synthase activity
AUL54_RS17640	COG2427	Protein of unknown function (DUF1641)
AUL54_RS17645	COG3383	formate dehydrogenase (NAD+) activity
AUL54_RS17650	COG5609	conserved protein (DUF2294)
AUL54_RS17655	COG2116	formate transmembrane transporter activity
AUL54_RS17660	COG2226	methyltransferase
AUL54_RS17665	COG1309	transcriptional regulator
AUL54_RS17670	COG2124	cytochrome p450
AUL54_RS17670	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AUL54_RS17675	COG2814	Major facilitator Superfamily
AUL54_RS17680	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AUL54_RS17695	COG0561	phosphatase activity
AUL54_RS17710	COG2318	DinB family
AUL54_RS17720	COG2814	Major facilitator Superfamily
AUL54_RS17730	COG0563	adenylate kinase activity
AUL54_RS17735	COG3708	Transcriptional regulator
AUL54_RS17735	COG2207	Transcriptional regulator
AUL54_RS17770	COG3677	Transposase
AUL54_RS17780	COG5484	DNA packaging
AUL54_RS17790	COG0656	L-ascorbic acid biosynthetic process
AUL54_RS17810	COG1733	regulation of RNA biosynthetic process
AUL54_RS17830	COG0398	Pfam SNARE associated Golgi protein
AUL54_RS17835	COG3409	Peptidoglycan-binding domain 1 protein
AUL54_RS17835	COG5632	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS17840	COG5632	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS17840	COG3409	Peptidoglycan-binding domain 1 protein
AUL54_RS17840	COG1388	LysM domain
AUL54_RS17850	COG2755	lipolytic protein G-D-S-L family
AUL54_RS17860	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
AUL54_RS17865	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AUL54_RS17870	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AUL54_RS17875	COG1534	Rna-binding protein
AUL54_RS17885	COG1713	HD superfamily hydrolase involved in NAD metabolism
AUL54_RS17890	COG0799	negative regulation of ribosome biogenesis
AUL54_RS17895	COG2226	methyltransferase
AUL54_RS17900	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AUL54_RS17905	COG1596	polysaccharide export
AUL54_RS17905	COG1555	photosystem II stabilization
AUL54_RS17910	COG2131	deaminase
AUL54_RS17915	COG0658	competence protein
AUL54_RS17915	COG2333	competence protein COMEC
AUL54_RS17920	COG1466	dna polymerase III delta subunit
AUL54_RS17935	COG0860	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS17950	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AUL54_RS17980	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AUL54_RS17985	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AUL54_RS17990	COG1283	sodium-dependent phosphate transmembrane transporter activity
AUL54_RS18000	COG1610	YqeY-like protein
AUL54_RS18005	COG1030	water channel activity
AUL54_RS18010	COG4864	UPF0365 protein
AUL54_RS18025	COG0561	phosphatase activity
AUL54_RS18030	COG1702	phosphate starvation-inducible protein PhoH
AUL54_RS18035	COG1480	7TM receptor with intracellular HD hydrolase
AUL54_RS18045	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AUL54_RS18050	COG0295	cytidine deaminase activity
AUL54_RS18055	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AUL54_RS18070	COG0751	glycine-tRNA ligase activity
AUL54_RS18075	COG0517	IMP dehydrogenase activity
AUL54_RS18090	COG0358	DNA primase activity
AUL54_RS18095	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AUL54_RS18100	COG2010	Cytochrome c
AUL54_RS18105	COG2384	SAM-dependent methyltransferase
AUL54_RS18110	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AUL54_RS18125	COG0513	Belongs to the DEAD box helicase family
AUL54_RS18140	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUL54_RS18145	COG0735	belongs to the Fur family
AUL54_RS18150	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
AUL54_RS18155	COG4709	membrane
AUL54_RS18165	COG1388	LysM domain
AUL54_RS18170	COG5521	maltodextrose utilization protein MalA
AUL54_RS18175	COG2839	Protein conserved in bacteria
AUL54_RS18180	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AUL54_RS18185	COG0477	Major facilitator Superfamily
AUL54_RS18190	COG0768	penicillin binding
AUL54_RS18195	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AUL54_RS18200	COG0573	inorganic phosphate transmembrane transporter activity
AUL54_RS18205	COG0581	inorganic phosphate transmembrane transporter activity
AUL54_RS18210	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AUL54_RS18215	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AUL54_RS18220	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AUL54_RS18230	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AUL54_RS18235	COG1757	Na H antiporter
AUL54_RS18240	COG4483	Protein conserved in bacteria
AUL54_RS18245	COG1940	carbohydrate kinase activity
AUL54_RS18250	COG2866	Carboxypeptidase
AUL54_RS18260	COG0011	TIGRFAM Protein of
AUL54_RS18265	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AUL54_RS18275	COG1393	Belongs to the ArsC family
AUL54_RS18285	COG1366	Belongs to the anti-sigma-factor antagonist family
AUL54_RS18290	COG1253	flavin adenine dinucleotide binding
AUL54_RS18295	COG0598	Magnesium transport protein CorA
AUL54_RS18300	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AUL54_RS18305	COG1459	type II secretion system
AUL54_RS18310	COG4537	Required for transformation and DNA binding
AUL54_RS18315	COG4970	Tfp pilus assembly protein FimT
AUL54_RS18325	COG4940	Competence protein ComGF
AUL54_RS18350	COG0681	Belongs to the peptidase S26 family
AUL54_RS18360	COG1396	sequence-specific DNA binding
AUL54_RS18375	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AUL54_RS18395	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AUL54_RS18410	COG1752	Esterase of the alpha-beta hydrolase superfamily
AUL54_RS18420	COG3872	metal-dependent enzyme
AUL54_RS18430	COG0006	proline dipeptidase activity
AUL54_RS18445	COG3854	ATPases associated with a variety of cellular activities
AUL54_RS18485	COG0511	ligase activity, forming carbon-carbon bonds
AUL54_RS18490	COG0439	Biotin carboxylase
AUL54_RS18495	COG1302	Protein conserved in bacteria
AUL54_RS18510	COG1570	exodeoxyribonuclease VII activity
AUL54_RS18520	COG0142	geranyltranstransferase activity
AUL54_RS18530	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
AUL54_RS18540	COG0497	DNA recombination
AUL54_RS18545	COG0750	zinc metalloprotease
AUL54_RS18550	COG0745	RESPONSE REGULATOR receiver
AUL54_RS18555	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AUL54_RS18570	COG1902	pentaerythritol trinitrate reductase activity
AUL54_RS18595	COG0860	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS18600	COG0584	glycerophosphoryl diester phosphodiesterase
AUL54_RS18605	COG0183	Belongs to the thiolase family
AUL54_RS18610	COG1250	3-hydroxyacyl-CoA dehydrogenase
AUL54_RS18615	COG1960	acyl-CoA dehydrogenase activity
AUL54_RS18620	COG0372	Belongs to the citrate synthase family
AUL54_RS18625	COG2079	MmgE PrpD family protein
AUL54_RS18630	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AUL54_RS18640	COG3829	transcription factor binding
AUL54_RS18640	COG3290	protein histidine kinase activity
AUL54_RS18645	COG0280	phosphate acetyltransferase
AUL54_RS18650	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AUL54_RS18655	COG3426	butyrate kinase activity
AUL54_RS18660	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AUL54_RS18665	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AUL54_RS18670	COG0022	dehydrogenase e1 component
AUL54_RS18675	COG0508	dehydrogenase complex catalyzes the overall conversion of
AUL54_RS18680	COG1597	lipid kinase activity
AUL54_RS18690	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUL54_RS18695	COG0765	amino acid transport
AUL54_RS18700	COG1126	abc transporter atp-binding protein
AUL54_RS18705	COG4129	membrane
AUL54_RS18710	COG1376	ErfK ybiS ycfS ynhG family protein
AUL54_RS18715	COG0346	lactoylglutathione lyase activity
AUL54_RS18720	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AUL54_RS18725	COG2195	Cleaves the N-terminal amino acid of tripeptides
AUL54_RS18730	COG0706	membrane insertase activity
AUL54_RS18745	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AUL54_RS18750	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AUL54_RS18760	COG0596	Alpha beta hydrolase
AUL54_RS18770	COG0250	Participates in transcription elongation, termination and antitermination
AUL54_RS18775	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AUL54_RS18775	COG2070	2-Nitropropane dioxygenase
AUL54_RS18790	COG0318	PFAM AMP-dependent synthetase and ligase
AUL54_RS18795	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS18800	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS18800	COG3321	synthase
AUL54_RS18800	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS18800	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AUL54_RS18800	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS18805	COG0300	oxidoreductase activity
AUL54_RS18805	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS18805	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS18805	COG3321	synthase
AUL54_RS18805	COG0318	PFAM AMP-dependent synthetase and ligase
AUL54_RS18810	COG3321	synthase
AUL54_RS18810	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS18810	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS18810	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AUL54_RS18810	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS18815	COG0300	oxidoreductase activity
AUL54_RS18815	COG3321	synthase
AUL54_RS18815	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS18815	COG0318	PFAM AMP-dependent synthetase and ligase
AUL54_RS18815	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS18820	COG0318	PFAM AMP-dependent synthetase and ligase
AUL54_RS18820	COG3321	synthase
AUL54_RS18820	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS18820	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS18820	COG0300	oxidoreductase activity
AUL54_RS18825	COG3321	synthase
AUL54_RS18825	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS18825	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS18825	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS18825	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AUL54_RS18830	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AUL54_RS18830	COG1028	Short-chain dehydrogenase reductase Sdr
AUL54_RS18830	COG3321	synthase
AUL54_RS18830	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUL54_RS18830	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AUL54_RS18835	COG2124	cytochrome p450
AUL54_RS18840	COG3425	synthase
AUL54_RS18845	COG1024	Enoyl-CoA hydratase
AUL54_RS18850	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AUL54_RS18855	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AUL54_RS18860	COG0300	oxidoreductase activity
AUL54_RS18865	COG3048	D-serine ammonia-lyase activity
AUL54_RS18875	COG0346	lactoylglutathione lyase activity
AUL54_RS18885	COG0628	permease
AUL54_RS18900	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AUL54_RS18905	COG0456	acetyltransferase
AUL54_RS18910	COG2329	Antibiotic biosynthesis monooxygenase
AUL54_RS18915	COG0456	acetyltransferase
AUL54_RS18915	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AUL54_RS18920	COG4918	Iron-sulphur cluster biosynthesis
AUL54_RS18930	COG1073	alpha beta
AUL54_RS18940	COG0667	Aldo Keto reductase
AUL54_RS18950	COG0494	nUDIX hydrolase
AUL54_RS18955	COG1379	DNA repair
AUL54_RS18960	COG1396	sequence-specific DNA binding
AUL54_RS18965	COG0252	asparaginase activity
AUL54_RS18970	COG1027	Aspartate ammonia-lyase
AUL54_RS18975	COG1757	Na H antiporter
AUL54_RS18980	COG0281	malic enzyme
AUL54_RS18995	COG1300	Membrane
AUL54_RS19000	COG0735	belongs to the Fur family
AUL54_RS19010	COG4974	Belongs to the 'phage' integrase family
AUL54_RS19015	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AUL54_RS19020	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AUL54_RS19025	COG1686	Belongs to the peptidase S11 family
AUL54_RS19030	COG1366	Belongs to the anti-sigma-factor antagonist family
AUL54_RS19040	COG1191	sigma factor activity
AUL54_RS19060	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AUL54_RS19075	COG0697	spore germination
AUL54_RS19080	COG0019	diaminopimelate decarboxylase activity
AUL54_RS19085	COG4086	secreted protein
AUL54_RS19090	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AUL54_RS19100	COG0681	Belongs to the peptidase S26 family
AUL54_RS19110	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AUL54_RS19110	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AUL54_RS19115	COG0307	riboflavin synthase, alpha
AUL54_RS19130	COG0456	acetyltransferase
AUL54_RS19135	COG1547	Domain of unknown function (DUF309)
AUL54_RS19155	COG1686	Belongs to the peptidase S11 family
AUL54_RS19160	COG2715	membrane protein required for spore maturation
AUL54_RS19165	COG0700	Nucleoside recognition
AUL54_RS19170	COG1187	pseudouridine synthase activity
AUL54_RS19175	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AUL54_RS19180	COG1333	cytochrome c biogenesis protein
AUL54_RS19185	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AUL54_RS19190	COG0745	RESPONSE REGULATOR receiver
AUL54_RS19195	COG5002	protein histidine kinase activity
AUL54_RS19200	COG1595	DNA-templated transcription, initiation
AUL54_RS19210	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AUL54_RS19215	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AUL54_RS19220	COG1141	Ferredoxin
AUL54_RS19225	COG4955	Helix-turn-helix domain
AUL54_RS19230	COG0514	ATP-dependent DNA helicase (RecQ)
AUL54_RS19235	COG1266	CAAX protease self-immunity
AUL54_RS19240	COG1388	LysM domain
AUL54_RS19250	COG1408	metallophosphoesterase
AUL54_RS19255	COG4862	establishment of competence for transformation
AUL54_RS19260	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AUL54_RS19265	COG0492	ferredoxin-NADP+ reductase activity
AUL54_RS19270	COG2339	peptidase activity
AUL54_RS19275	COG3773	Cell wall hydrolase
AUL54_RS19275	COG3409	Peptidoglycan-binding domain 1 protein
AUL54_RS19280	COG2959	enzyme of heme biosynthesis
AUL54_RS19285	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
AUL54_RS19295	COG0539	negative regulation of cytoplasmic translation
AUL54_RS19330	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AUL54_RS19335	COG0776	regulation of translation
AUL54_RS19350	COG0142	geranyltranstransferase activity
AUL54_RS19360	COG0142	geranyltranstransferase activity
AUL54_RS19365	COG0105	UTP biosynthetic process
AUL54_RS19370	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AUL54_RS19385	COG4401	Chorismate mutase type I
AUL54_RS19390	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AUL54_RS19425	COG0287	Prephenate dehydrogenase
AUL54_RS19435	COG0457	Tetratricopeptide repeat
AUL54_RS19450	COG0723	plastoquinol--plastocyanin reductase activity
AUL54_RS19455	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AUL54_RS19460	COG2010	Cytochrome c
AUL54_RS19460	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AUL54_RS19465	COG4347	Protein of unknown function (DUF1405)
AUL54_RS19475	COG2140	Oxalate decarboxylase
AUL54_RS19480	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUL54_RS19485	COG1694	Mazg nucleotide pyrophosphohydrolase
AUL54_RS19500	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AUL54_RS19505	COG0438	transferase activity, transferring glycosyl groups
AUL54_RS19515	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AUL54_RS19515	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AUL54_RS19535	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AUL54_RS19535	COG1199	ATP-dependent helicase activity
AUL54_RS19540	COG5353	protein conserved in bacteria
AUL54_RS19545	COG0436	Aminotransferase
AUL54_RS19555	COG3935	DnaD domain protein
AUL54_RS19560	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AUL54_RS19570	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AUL54_RS19570	COG4499	WXG100 protein secretion system (Wss), protein YukC
AUL54_RS19610	COG0071	Belongs to the small heat shock protein (HSP20) family
AUL54_RS19615	COG2190	(PTS) system
AUL54_RS19620	COG1111	helicase
AUL54_RS19620	COG1205	dead DEAH box helicase
AUL54_RS19625	COG3359	exonuclease
AUL54_RS19645	COG0116	Belongs to the methyltransferase superfamily
AUL54_RS19655	COG1199	ATP-dependent helicase activity
AUL54_RS19660	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AUL54_RS19670	COG2233	PERMEase
AUL54_RS19680	COG1525	nuclease
AUL54_RS19685	COG4282	regulation of fungal-type cell wall biogenesis
AUL54_RS19695	COG5444	nuclease activity
AUL54_RS19730	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AUL54_RS19735	COG0457	Tetratricopeptide repeat
AUL54_RS19760	COG3409	Peptidoglycan-binding domain 1 protein
AUL54_RS19760	COG5632	N-Acetylmuramoyl-L-alanine amidase
AUL54_RS19765	COG5434	Belongs to the glycosyl hydrolase 28 family
AUL54_RS19775	COG2433	Pfam Transposase IS66
AUL54_RS19785	COG1196	nuclear chromosome segregation
AUL54_RS19785	COG0741	lytic transglycosylase activity
AUL54_RS19785	COG0739	heme binding
AUL54_RS19900	COG4373	Mu-like prophage FluMu protein gp28
AUL54_RS19940	COG0776	regulation of translation
AUL54_RS20045	COG3655	Transcriptional regulator
AUL54_RS20155	COG3655	Transcriptional regulator
AUL54_RS20205	COG4474	Belongs to the UPF0398 family
AUL54_RS20225	COG1793	dna ligase
AUL54_RS20230	COG2135	peptidase activity
AUL54_RS20250	COG4195	phage-related replication protein
AUL54_RS20255	COG5434	Belongs to the glycosyl hydrolase 28 family
AUL54_RS20255	COG3420	alginic acid biosynthetic process
AUL54_RS20280	COG2887	Belongs to the helicase family. UvrD subfamily
AUL54_RS20290	COG0305	Participates in initiation and elongation during chromosome replication
AUL54_RS20295	COG0358	DNA primase activity
AUL54_RS20300	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity