locus-tag class description JI729_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JI729_RS00005 PF11638 DnaA N-terminal domain JI729_RS00005 PF00308 Bacterial dnaA protein JI729_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JI729_RS00010 PF02767 DNA polymerase III beta subunit, central domain JI729_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JI729_RS00020 PF02463 RecF/RecN/SMC N terminal domain JI729_RS00025 PF01751 Toprim domain JI729_RS00025 PF00204 DNA gyrase B JI729_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus JI729_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A JI729_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller JI729_RS00060 PF14175 YaaC-like Protein JI729_RS00065 PF00478 IMP dehydrogenase / GMP reductase domain JI729_RS00065 PF00571 CBS domain JI729_RS00070 PF00768 D-alanyl-D-alanine carboxypeptidase JI729_RS00070 PF07943 Penicillin-binding protein 5, C-terminal domain JI729_RS00075 PF01680 SOR/SNZ family JI729_RS00080 PF01174 SNO glutamine amidotransferase family JI729_RS00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JI729_RS00085 PF02403 Seryl-tRNA synthetase N-terminal domain JI729_RS00100 PF01712 Deoxynucleoside kinase JI729_RS00105 PF01712 Deoxynucleoside kinase JI729_RS00110 PF00857 Isochorismatase family JI729_RS00115 PF14437 MafB19-like deaminase JI729_RS00125 PF12169 DNA polymerase III subunits gamma and tau domain III JI729_RS00130 PF02575 YbaB/EbfC DNA-binding family JI729_RS00135 PF02132 RecR protein JI729_RS00135 PF13662 Toprim domain JI729_RS00140 PF10704 Protein of unknown function (DUF2508) JI729_RS00145 PF07441 SigmaK-factor processing regulatory protein BofA JI729_RS00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JI729_RS00180 PF01276 Orn/Lys/Arg decarboxylase, major domain JI729_RS00185 PF02223 Thymidylate kinase JI729_RS00190 PF09115 DNA polymerase III, delta subunit, C terminal JI729_RS00195 PF04468 PSP1 C-terminal conserved region JI729_RS00200 PF06156 Initiation control protein YabA JI729_RS00205 PF05175 Methyltransferase small domain JI729_RS00210 PF01541 GIY-YIG catalytic domain JI729_RS00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JI729_RS00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JI729_RS00220 PF18277 AbrB C-terminal domain JI729_RS00225 PF08264 Anticodon-binding domain of tRNA JI729_RS00225 PF01588 Putative tRNA binding domain JI729_RS00225 PF09334 tRNA synthetases class I (M) JI729_RS00230 PF01026 TatD related DNase JI729_RS00235 PF13662 Toprim domain JI729_RS00235 PF13331 Domain of unknown function (DUF4093) JI729_RS00240 PF00398 Ribosomal RNA adenine dimethylase JI729_RS00245 PF05582 YabG peptidase U57 JI729_RS00250 PF06257 Biofilm formation stimulator VEG JI729_RS00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type JI729_RS00260 PF00288 GHMP kinases N terminal domain JI729_RS00260 PF08544 GHMP kinases C terminal JI729_RS00265 PF00156 Phosphoribosyl transferase domain JI729_RS00265 PF09182 Bacterial purine repressor, N-terminal JI729_RS00270 PF01042 Endoribonuclease L-PSP JI729_RS00275 PF04026 SpoVG JI729_RS00280 PF00132 Bacterial transferase hexapeptide (six repeats) JI729_RS00280 PF00483 Nucleotidyl transferase JI729_RS00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JI729_RS00285 PF14572 Phosphoribosyl synthetase-associated domain JI729_RS00290 PF01195 Peptidyl-tRNA hydrolase JI729_RS00300 PF00271 Helicase conserved C-terminal domain JI729_RS00300 PF00270 DEAD/DEAH box helicase JI729_RS00300 PF03461 TRCF domain JI729_RS00300 PF17757 UvrB interaction domain JI729_RS00300 PF02559 CarD-like/TRCF domain JI729_RS00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JI729_RS00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor JI729_RS00310 PF14667 Polysaccharide biosynthesis C-terminal domain JI729_RS00310 PF01943 Polysaccharide biosynthesis protein JI729_RS00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JI729_RS00315 PF03819 MazG nucleotide pyrophosphohydrolase domain JI729_RS00320 PF01479 S4 domain JI729_RS00325 PF07873 YabP family JI729_RS00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) JI729_RS00340 PF00575 S1 RNA binding domain JI729_RS00355 PF07228 Stage II sporulation protein E (SpoIIE) JI729_RS00360 PF09179 TilS substrate binding domain JI729_RS00360 PF01171 PP-loop family JI729_RS00360 PF11734 TilS substrate C-terminal domain JI729_RS00365 PF00156 Phosphoribosyl transferase domain JI729_RS00370 PF06480 FtsH Extracellular JI729_RS00370 PF00004 ATPase family associated with various cellular activities (AAA) JI729_RS00370 PF17862 AAA+ lid domain JI729_RS00370 PF01434 Peptidase family M41 JI729_RS00375 PF03309 Type III pantothenate kinase JI729_RS00380 PF01430 Hsp33 protein JI729_RS00385 PF00291 Pyridoxal-phosphate dependent enzyme JI729_RS00390 PF04715 Anthranilate synthase component I, N terminal region JI729_RS00390 PF00425 chorismate binding enzyme JI729_RS00395 PF00117 Glutamine amidotransferase class-I JI729_RS00400 PF01063 Amino-transferase class IV JI729_RS00405 PF00809 Pterin binding enzyme JI729_RS00410 PF02152 Dihydroneopterin aldolase JI729_RS00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JI729_RS00420 PF01381 Helix-turn-helix JI729_RS00425 PF01207 Dihydrouridine synthase (Dus) JI729_RS00430 PF00152 tRNA synthetases class II (D, K and N) JI729_RS00430 PF01336 OB-fold nucleic acid binding domain JI729_RS00460 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JI729_RS00465 PF00814 Glycoprotease family JI729_RS00470 PF00583 Acetyltransferase (GNAT) family JI729_RS00475 PF00814 Glycoprotease family JI729_RS00480 PF12848 ABC transporter JI729_RS00480 PF16326 ABC transporter C-terminal domain JI729_RS00480 PF00005 ABC transporter JI729_RS00485 PF02629 CoA binding domain JI729_RS00485 PF06971 Putative DNA-binding protein N-terminus JI729_RS00495 PF02517 CPBP intramembrane metalloprotease JI729_RS00500 PF00166 Chaperonin 10 Kd subunit JI729_RS00505 PF00118 TCP-1/cpn60 chaperonin family JI729_RS00510 PF00117 Glutamine amidotransferase class-I JI729_RS00510 PF02540 NAD synthase JI729_RS00510 PF00958 GMP synthase C terminal domain JI729_RS00515 PF00860 Permease family JI729_RS00520 PF00072 Response regulator receiver domain JI729_RS00520 PF00486 Transcriptional regulatory protein, C terminal JI729_RS00525 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS00525 PF00989 PAS fold JI729_RS00525 PF16736 Single Cache-like JI729_RS00550 PF01323 DSBA-like thioredoxin domain JI729_RS00575 PF02673 Bacitracin resistance protein BacA JI729_RS00585 PF00005 ABC transporter JI729_RS00590 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS00590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS00595 PF00486 Transcriptional regulatory protein, C terminal JI729_RS00595 PF00072 Response regulator receiver domain JI729_RS00615 PF05045 Rhamnan synthesis protein F JI729_RS00615 PF14307 Glycosyltransferase WbsX JI729_RS00630 PF16363 GDP-mannose 4,6 dehydratase JI729_RS00640 PF00535 Glycosyl transferase family 2 JI729_RS00660 PF00892 EamA-like transporter family JI729_RS00685 PF00731 AIR carboxylase JI729_RS00690 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JI729_RS00690 PF02222 ATP-grasp domain JI729_RS00695 PF10397 Adenylosuccinate lyase C-terminus JI729_RS00695 PF00206 Lyase JI729_RS00700 PF01259 SAICAR synthetase JI729_RS00705 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JI729_RS00715 PF00586 AIR synthase related protein, N-terminal domain JI729_RS00715 PF02769 AIR synthase related protein, C-terminal domain JI729_RS00715 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JI729_RS00720 PF00156 Phosphoribosyl transferase domain JI729_RS00725 PF02769 AIR synthase related protein, C-terminal domain JI729_RS00725 PF00586 AIR synthase related protein, N-terminal domain JI729_RS00730 PF00551 Formyl transferase JI729_RS00735 PF02142 MGS-like domain JI729_RS00735 PF01808 AICARFT/IMPCHase bienzyme JI729_RS00740 PF02844 Phosphoribosylglycinamide synthetase, N domain JI729_RS00740 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JI729_RS00740 PF02843 Phosphoribosylglycinamide synthetase, C domain JI729_RS00760 PF01884 PcrB family JI729_RS00765 PF13361 UvrD-like helicase C-terminal domain JI729_RS00765 PF00580 UvrD/REP helicase N-terminal domain JI729_RS00770 PF01653 NAD-dependent DNA ligase adenylation domain JI729_RS00770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JI729_RS00770 PF12826 Helix-hairpin-helix motif JI729_RS00770 PF03120 NAD-dependent DNA ligase OB-fold domain JI729_RS00770 PF00533 BRCA1 C Terminus (BRCT) domain JI729_RS00775 PF07537 CamS sex pheromone cAM373 precursor JI729_RS00780 PF01925 Sulfite exporter TauE/SafE JI729_RS00785 PF00171 Aldehyde dehydrogenase family JI729_RS00790 PF00857 Isochorismatase family JI729_RS00795 PF00005 ABC transporter JI729_RS00795 PF09383 NIL domain JI729_RS00800 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS00805 PF03180 NLPA lipoprotein JI729_RS00820 PF02374 Anion-transporting ATPase JI729_RS00820 PF17886 HSP20-like domain found in ArsA JI729_RS00825 PF01047 MarR family JI729_RS00830 PF05360 yiaA/B two helix domain JI729_RS00835 PF02686 Glu-tRNAGln amidotransferase C subunit JI729_RS00840 PF01425 Amidase JI729_RS00845 PF02637 GatB domain JI729_RS00845 PF02934 GatB/GatE catalytic domain JI729_RS00850 PF00781 Diacylglycerol kinase catalytic domain JI729_RS00855 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS00860 PF00202 Aminotransferase class-III JI729_RS00865 PF00158 Sigma-54 interaction domain JI729_RS00870 PF00171 Aldehyde dehydrogenase family JI729_RS00875 PF00893 Small Multidrug Resistance protein JI729_RS00885 PF02073 Thermophilic metalloprotease (M29) JI729_RS00900 PF07662 Na+ dependent nucleoside transporter C-terminus JI729_RS00900 PF01773 Na+ dependent nucleoside transporter N-terminus JI729_RS00900 PF07670 Nucleoside recognition JI729_RS00905 PF13847 Methyltransferase domain JI729_RS00905 PF01938 TRAM domain JI729_RS00905 PF05958 tRNA (Uracil-5-)-methyltransferase JI729_RS00910 PF01207 Dihydrouridine synthase (Dus) JI729_RS00915 PF07308 Protein of unknown function (DUF1456) JI729_RS00930 PF13378 Enolase C-terminal domain-like JI729_RS00930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JI729_RS00940 PF03553 Na+/H+ antiporter family JI729_RS00945 PF07687 Peptidase dimerisation domain JI729_RS00945 PF01546 Peptidase family M20/M25/M40 JI729_RS00955 PF13192 Thioredoxin domain JI729_RS00955 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS00960 PF00578 AhpC/TSA family JI729_RS00965 PF01636 Phosphotransferase enzyme family JI729_RS00970 PF01008 Initiation factor 2 subunit family JI729_RS00975 PF00596 Class II Aldolase and Adducin N-terminal domain JI729_RS00980 PF01032 FecCD transport family JI729_RS00985 PF01032 FecCD transport family JI729_RS00990 PF01497 Periplasmic binding protein JI729_RS00995 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS01005 PF12728 Helix-turn-helix domain JI729_RS01030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS01030 PF00989 PAS fold JI729_RS01030 PF13188 PAS domain JI729_RS01030 PF13426 PAS domain JI729_RS01030 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS01050 PF10127 RNA repair pathway DNA polymerase beta family JI729_RS01055 PF07690 Major Facilitator Superfamily JI729_RS01060 PF01266 FAD dependent oxidoreductase JI729_RS01060 PF00355 Rieske [2Fe-2S] domain JI729_RS01070 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS01075 PF00497 Bacterial extracellular solute-binding proteins, family 3 JI729_RS01080 PF00005 ABC transporter JI729_RS01085 PF12729 Four helix bundle sensory module for signal transduction JI729_RS01085 PF00672 HAMP domain JI729_RS01085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS01090 PF01316 Arginine repressor, DNA binding domain JI729_RS01090 PF02863 Arginine repressor, C-terminal domain JI729_RS01100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JI729_RS01100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JI729_RS01105 PF13520 Amino acid permease JI729_RS01110 PF00696 Amino acid kinase family JI729_RS01115 PF00027 Cyclic nucleotide-binding domain JI729_RS01115 PF13545 Crp-like helix-turn-helix domain JI729_RS01130 PF00128 Alpha amylase, catalytic domain JI729_RS01130 PF16657 Maltogenic Amylase, C-terminal domain JI729_RS01135 PF02378 Phosphotransferase system, EIIC JI729_RS01135 PF00367 phosphotransferase system, EIIB JI729_RS01135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JI729_RS01140 PF03372 Endonuclease/Exonuclease/phosphatase family JI729_RS01145 PF01061 ABC-2 type transporter JI729_RS01150 PF01751 Toprim domain JI729_RS01150 PF01131 DNA topoisomerase JI729_RS01155 PF02110 Hydroxyethylthiazole kinase family JI729_RS01160 PF02581 Thiamine monophosphate synthase JI729_RS01165 PF03605 Anaerobic c4-dicarboxylate membrane transporter JI729_RS01170 PF00672 HAMP domain JI729_RS01170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS01175 PF00501 AMP-binding enzyme JI729_RS01175 PF13193 AMP-binding enzyme C-terminal domain JI729_RS01175 PF00668 Condensation domain JI729_RS01175 PF07993 Male sterility protein JI729_RS01175 PF00550 Phosphopantetheine attachment site JI729_RS01180 PF01910 Thiamine-binding protein JI729_RS01185 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS01195 PF00005 ABC transporter JI729_RS01205 PF00041 Fibronectin type III domain JI729_RS01205 PF00704 Glycosyl hydrolases family 18 JI729_RS01230 PF08360 QacR-like protein, C-terminal region JI729_RS01230 PF00440 Bacterial regulatory proteins, tetR family JI729_RS01245 PF11700 Vacuole effluxer Atg22 like JI729_RS01260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JI729_RS01260 PF09180 Prolyl-tRNA synthetase, C-terminal JI729_RS01260 PF03129 Anticodon binding domain JI729_RS01270 PF00480 ROK family JI729_RS01275 PF02342 TerD domain JI729_RS01280 PF02342 TerD domain JI729_RS01285 PF02342 TerD domain JI729_RS01290 PF03741 Integral membrane protein TerC family JI729_RS01295 PF14266 Putative component of 'biosynthetic module' JI729_RS01300 PF05816 Toxic anion resistance protein (TelA) JI729_RS01305 PF00689 Cation transporting ATPase, C-terminus JI729_RS01305 PF00690 Cation transporter/ATPase, N-terminus JI729_RS01310 PF06569 Protein of unknown function (DUF1128) JI729_RS01315 PF01451 Low molecular weight phosphotyrosine protein phosphatase JI729_RS01325 PF03631 Virulence factor BrkB JI729_RS01335 PF00892 EamA-like transporter family JI729_RS01345 PF10502 Signal peptidase, peptidase S26 JI729_RS01355 PF09335 SNARE associated Golgi protein JI729_RS01370 PF16242 Pyridoxamine 5'-phosphate oxidase like JI729_RS01375 PF01699 Sodium/calcium exchanger protein JI729_RS01380 PF14167 YfkD-like protein JI729_RS01385 PF08756 YfkB-like domain JI729_RS01385 PF04055 Radical SAM superfamily JI729_RS01395 PF05681 Fumarate hydratase (Fumerase) JI729_RS01395 PF05683 Fumarase C-terminus JI729_RS01400 PF01522 Polysaccharide deacetylase JI729_RS01405 PF00730 HhH-GPD superfamily base excision DNA repair protein JI729_RS01410 PF01938 TRAM domain JI729_RS01410 PF05958 tRNA (Uracil-5-)-methyltransferase JI729_RS01415 PF01416 tRNA pseudouridine synthase JI729_RS01425 PF13426 PAS domain JI729_RS01425 PF00158 Sigma-54 interaction domain JI729_RS01425 PF02954 Bacterial regulatory protein, Fis family JI729_RS01435 PF00324 Amino acid permease JI729_RS01440 PF07687 Peptidase dimerisation domain JI729_RS01440 PF01546 Peptidase family M20/M25/M40 JI729_RS01465 PF04960 Glutaminase JI729_RS01470 PF00367 phosphotransferase system, EIIB JI729_RS01470 PF02378 Phosphotransferase system, EIIC JI729_RS01475 PF00144 Beta-lactamase JI729_RS01490 PF00535 Glycosyl transferase family 2 JI729_RS01495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JI729_RS01495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JI729_RS01495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JI729_RS01500 PF00551 Formyl transferase JI729_RS01500 PF01370 NAD dependent epimerase/dehydratase family JI729_RS01500 PF02911 Formyl transferase, C-terminal domain JI729_RS01505 PF00535 Glycosyl transferase family 2 JI729_RS01515 PF02901 Pyruvate formate lyase-like JI729_RS01515 PF01228 Glycine radical JI729_RS01520 PF04055 Radical SAM superfamily JI729_RS01525 PF04101 Glycosyltransferase family 28 C-terminal domain JI729_RS01525 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JI729_RS01540 PF01979 Amidohydrolase family JI729_RS01545 PF08338 Domain of unknown function (DUF1731) JI729_RS01545 PF01370 NAD dependent epimerase/dehydratase family JI729_RS01550 PF02631 RecX family JI729_RS01565 PF08176 Small acid-soluble spore protein K family JI729_RS01570 PF14043 WVELL protein JI729_RS01575 PF04307 LexA-binding, inner membrane-associated putative hydrolase JI729_RS01580 PF14815 NUDIX domain JI729_RS01580 PF00730 HhH-GPD superfamily base excision DNA repair protein JI729_RS01590 PF04259 Small, acid-soluble spore protein, gamma-type JI729_RS01595 PF14182 YgaB-like protein JI729_RS01600 PF04167 Protein of unknown function (DUF402) JI729_RS01605 PF00005 ABC transporter JI729_RS01605 PF00664 ABC transporter transmembrane region JI729_RS01610 PF06081 Aromatic acid exporter family member 1 JI729_RS01615 PF01493 GXGXG motif JI729_RS01615 PF01645 Conserved region in glutamate synthase JI729_RS01615 PF00310 Glutamine amidotransferases class-II JI729_RS01615 PF04898 Glutamate synthase central domain JI729_RS01620 PF00202 Aminotransferase class-III JI729_RS01625 PF00005 ABC transporter JI729_RS01640 PF07885 Ion channel JI729_RS01645 PF00578 AhpC/TSA family JI729_RS01650 PF01475 Ferric uptake regulator family JI729_RS01660 PF11023 Zinc-ribbon containing domain JI729_RS01760 PF01709 Transcriptional regulator JI729_RS01765 PF00293 NUDIX domain JI729_RS01765 PF13344 Haloacid dehalogenase-like hydrolase JI729_RS01770 PF00905 Penicillin binding protein transpeptidase domain JI729_RS01770 PF00912 Transglycosylase JI729_RS01775 PF13462 Thioredoxin JI729_RS01785 PF08331 Domain of unknown function (DUF1730) JI729_RS01790 PF12671 Putative amidase domain JI729_RS01795 PF00588 SpoU rRNA Methylase family JI729_RS01800 PF03707 Bacterial signalling protein N terminal repeat JI729_RS01800 PF00563 EAL domain JI729_RS01800 PF00990 Diguanylate cyclase, GGDEF domain JI729_RS01805 PF08298 PrkA AAA domain JI729_RS01805 PF06798 PrkA serine protein kinase C-terminal domain JI729_RS01810 PF04285 Protein of unknown function (DUF444) JI729_RS01825 PF02028 BCCT, betaine/carnitine/choline family transporter JI729_RS01830 PF08453 Peptidase family M9 N-terminal JI729_RS01830 PF18496 Collagenase G catalytic helper subdomain JI729_RS01830 PF01752 Collagenase JI729_RS01840 PF15975 Flotillin JI729_RS01840 PF01145 SPFH domain / Band 7 family JI729_RS01845 PF02743 Cache domain JI729_RS01845 PF00672 HAMP domain JI729_RS01845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS01850 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JI729_RS01850 PF17203 Single cache domain 3 JI729_RS01850 PF00989 PAS fold JI729_RS01850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS01855 PF00072 Response regulator receiver domain JI729_RS01855 PF12431 Transcriptional regulator JI729_RS01860 PF03600 Citrate transporter JI729_RS01885 PF04309 Glycerol-3-phosphate responsive antiterminator JI729_RS01890 PF17912 MalK OB fold domain JI729_RS01890 PF00005 ABC transporter JI729_RS01895 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS01900 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS01905 PF13416 Bacterial extracellular solute-binding protein JI729_RS01910 PF00149 Calcineurin-like phosphoesterase JI729_RS01915 PF00486 Transcriptional regulatory protein, C terminal JI729_RS01915 PF00072 Response regulator receiver domain JI729_RS01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS01920 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS01930 PF13529 Peptidase_C39 like family JI729_RS01935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS01935 PF02743 Cache domain JI729_RS01935 PF00672 HAMP domain JI729_RS01940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS01940 PF00989 PAS fold JI729_RS01940 PF17203 Single cache domain 3 JI729_RS01940 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JI729_RS01945 PF00072 Response regulator receiver domain JI729_RS01950 PF03390 2-hydroxycarboxylate transporter family JI729_RS01955 PF03949 Malic enzyme, NAD binding domain JI729_RS01955 PF00390 Malic enzyme, N-terminal domain JI729_RS01965 PF00892 EamA-like transporter family JI729_RS01970 PF00155 Aminotransferase class I and II JI729_RS01970 PF00392 Bacterial regulatory proteins, gntR family JI729_RS01980 PF18698 Histidine kinase sensor domain JI729_RS01980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS01980 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS01980 PF00989 PAS fold JI729_RS01980 PF00672 HAMP domain JI729_RS01985 PF00072 Response regulator receiver domain JI729_RS01985 PF00486 Transcriptional regulatory protein, C terminal JI729_RS01995 PF02634 FdhD/NarQ family JI729_RS02000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JI729_RS02000 PF00384 Molybdopterin oxidoreductase JI729_RS02000 PF01568 Molydopterin dinucleotide binding domain JI729_RS02000 PF00037 4Fe-4S binding domain JI729_RS02000 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JI729_RS02005 PF07849 Protein of unknown function (DUF1641) JI729_RS02015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JI729_RS02015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JI729_RS02020 PF13520 Amino acid permease JI729_RS02030 PF01022 Bacterial regulatory protein, arsR family JI729_RS02035 PF00403 Heavy-metal-associated domain JI729_RS02040 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JI729_RS02040 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JI729_RS02040 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JI729_RS02055 PF07504 Fungalysin/Thermolysin Propeptide Motif JI729_RS02055 PF03413 Peptidase propeptide and YPEB domain JI729_RS02055 PF01447 Thermolysin metallopeptidase, catalytic domain JI729_RS02055 PF02868 Thermolysin metallopeptidase, alpha-helical domain JI729_RS02075 PF04294 VanW like protein JI729_RS02080 PF03816 Cell envelope-related transcriptional attenuator domain JI729_RS02085 PF01773 Na+ dependent nucleoside transporter N-terminus JI729_RS02085 PF07662 Na+ dependent nucleoside transporter C-terminus JI729_RS02090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS02095 PF01595 Cyclin M transmembrane N-terminal domain JI729_RS02095 PF00571 CBS domain JI729_RS02095 PF03471 Transporter associated domain JI729_RS02100 PF10415 Fumarase C C-terminus JI729_RS02100 PF00206 Lyase JI729_RS02105 PF02652 L-lactate permease JI729_RS02110 PF01022 Bacterial regulatory protein, arsR family JI729_RS02115 PF08141 Small acid-soluble spore protein H family JI729_RS02120 PF00854 POT family JI729_RS02125 PF01497 Periplasmic binding protein JI729_RS02130 PF01032 FecCD transport family JI729_RS02135 PF01032 FecCD transport family JI729_RS02140 PF00005 ABC transporter JI729_RS02145 PF08241 Methyltransferase domain JI729_RS02150 PF00155 Aminotransferase class I and II JI729_RS02155 PF01370 NAD dependent epimerase/dehydratase family JI729_RS02160 PF00293 NUDIX domain JI729_RS02160 PF13344 Haloacid dehalogenase-like hydrolase JI729_RS02165 PF00092 von Willebrand factor type A domain JI729_RS02170 PF07728 AAA domain (dynein-related subfamily) JI729_RS02175 PF13396 Phospholipase_D-nuclease N-terminal JI729_RS02175 PF13091 PLD-like domain JI729_RS02185 PF03707 Bacterial signalling protein N terminal repeat JI729_RS02185 PF00990 Diguanylate cyclase, GGDEF domain JI729_RS02185 PF00563 EAL domain JI729_RS02190 PF13520 Amino acid permease JI729_RS02195 PF00392 Bacterial regulatory proteins, gntR family JI729_RS02195 PF07702 UTRA domain JI729_RS02200 PF00367 phosphotransferase system, EIIB JI729_RS02200 PF02378 Phosphotransferase system, EIIC JI729_RS02205 PF00128 Alpha amylase, catalytic domain JI729_RS02205 PF16657 Maltogenic Amylase, C-terminal domain JI729_RS02220 PF03323 Bacillus/Clostridium GerA spore germination protein JI729_RS02225 PF01636 Phosphotransferase enzyme family JI729_RS02230 PF01235 Sodium:alanine symporter family JI729_RS02235 PF00005 ABC transporter JI729_RS02240 PF00497 Bacterial extracellular solute-binding proteins, family 3 JI729_RS02245 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS02250 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS02255 PF00324 Amino acid permease JI729_RS02270 PF04542 Sigma-70 region 2 JI729_RS02270 PF08281 Sigma-70, region 4 JI729_RS02280 PF13280 WYL domain JI729_RS02280 PF08279 HTH domain JI729_RS02285 PF01872 RibD C-terminal domain JI729_RS02290 PF00989 PAS fold JI729_RS02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS02290 PF00672 HAMP domain JI729_RS02290 PF18698 Histidine kinase sensor domain JI729_RS02290 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS02295 PF00486 Transcriptional regulatory protein, C terminal JI729_RS02295 PF00072 Response regulator receiver domain JI729_RS02305 PF01740 STAS domain JI729_RS02305 PF00916 Sulfate permease family JI729_RS02310 PF00582 Universal stress protein family JI729_RS02320 PF07690 Major Facilitator Superfamily JI729_RS02325 PF01047 MarR family JI729_RS02330 PF07690 Major Facilitator Superfamily JI729_RS02335 PF00356 Bacterial regulatory proteins, lacI family JI729_RS02340 PF00294 pfkB family carbohydrate kinase JI729_RS02345 PF05025 RbsD / FucU transport protein family JI729_RS02350 PF00005 ABC transporter JI729_RS02355 PF02653 Branched-chain amino acid transport system / permease component JI729_RS02360 PF13407 Periplasmic binding protein domain JI729_RS02365 PF00923 Transaldolase/Fructose-6-phosphate aldolase JI729_RS02370 PF05547 Immune inhibitor A peptidase M6 JI729_RS02390 PF00107 Zinc-binding dehydrogenase JI729_RS02390 PF08240 Alcohol dehydrogenase GroES-like domain JI729_RS02400 PF00882 Zinc dependent phospholipase C JI729_RS02405 PF03372 Endonuclease/Exonuclease/phosphatase family JI729_RS02435 PF02673 Bacitracin resistance protein BacA JI729_RS02440 PF00672 HAMP domain JI729_RS02440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS02440 PF02743 Cache domain JI729_RS02445 PF06725 3D domain JI729_RS02445 PF01476 LysM domain JI729_RS02450 PF01381 Helix-turn-helix JI729_RS02460 PF04203 Sortase domain JI729_RS02470 PF00854 POT family JI729_RS02475 PF05525 Branched-chain amino acid transport protein JI729_RS02490 PF00324 Amino acid permease JI729_RS02495 PF00860 Permease family JI729_RS02510 PF13673 Acetyltransferase (GNAT) domain JI729_RS02520 PF00999 Sodium/hydrogen exchanger family JI729_RS02520 PF02254 TrkA-N domain JI729_RS02520 PF02080 TrkA-C domain JI729_RS02530 PF00510 Cytochrome c oxidase subunit III JI729_RS02535 PF00115 Cytochrome C and Quinol oxidase polypeptide I JI729_RS02540 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JI729_RS02545 PF00324 Amino acid permease JI729_RS02550 PF13529 Peptidase_C39 like family JI729_RS02555 PF07687 Peptidase dimerisation domain JI729_RS02555 PF01546 Peptidase family M20/M25/M40 JI729_RS02560 PF11755 Protein of unknown function (DUF3311) JI729_RS02565 PF00474 Sodium:solute symporter family JI729_RS02570 PF03323 Bacillus/Clostridium GerA spore germination protein JI729_RS02575 PF03845 Spore germination protein JI729_RS02580 PF05504 Spore germination B3/ GerAC like, C-terminal JI729_RS02590 PF07664 Ferrous iron transport protein B C terminus JI729_RS02590 PF17910 FeoB cytosolic helical domain JI729_RS02590 PF02421 Ferrous iron transport protein B JI729_RS02590 PF07670 Nucleoside recognition JI729_RS02595 PF02421 Ferrous iron transport protein B JI729_RS02595 PF07664 Ferrous iron transport protein B C terminus JI729_RS02595 PF17910 FeoB cytosolic helical domain JI729_RS02595 PF07670 Nucleoside recognition JI729_RS02600 PF04023 FeoA domain JI729_RS02600 PF07664 Ferrous iron transport protein B C terminus JI729_RS02600 PF02421 Ferrous iron transport protein B JI729_RS02600 PF17910 FeoB cytosolic helical domain JI729_RS02600 PF07670 Nucleoside recognition JI729_RS02605 PF12849 PBP superfamily domain JI729_RS02610 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS02615 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS02620 PF00873 AcrB/AcrD/AcrF family JI729_RS02740 PF00571 CBS domain JI729_RS02755 PF00246 Zinc carboxypeptidase JI729_RS02755 PF08239 Bacterial SH3 domain JI729_RS02760 PF03070 TENA/THI-4/PQQC family JI729_RS02765 PF00005 ABC transporter JI729_RS02770 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS02775 PF09084 NMT1/THI5 like JI729_RS02780 PF02581 Thiamine monophosphate synthase JI729_RS02785 PF01266 FAD dependent oxidoreductase JI729_RS02790 PF02597 ThiS family JI729_RS02795 PF05690 Thiazole biosynthesis protein ThiG JI729_RS02800 PF00899 ThiF family JI729_RS02805 PF08543 Phosphomethylpyrimidine kinase JI729_RS02830 PF03814 Potassium-transporting ATPase A subunit JI729_RS02840 PF02669 K+-transporting ATPase, c chain JI729_RS02845 PF02702 Osmosensitive K+ channel His kinase sensor domain JI729_RS02850 PF07690 Major Facilitator Superfamily JI729_RS02855 PF01047 MarR family JI729_RS02880 PF00005 ABC transporter JI729_RS02890 PF00860 Permease family JI729_RS02900 PF03734 L,D-transpeptidase catalytic domain JI729_RS02900 PF17969 L,D-transpeptidase C-terminal domain JI729_RS02910 PF00294 pfkB family carbohydrate kinase JI729_RS02915 PF00251 Glycosyl hydrolases family 32 N-terminal domain JI729_RS02915 PF08244 Glycosyl hydrolases family 32 C terminal JI729_RS02920 PF00367 phosphotransferase system, EIIB JI729_RS02920 PF02378 Phosphotransferase system, EIIC JI729_RS02925 PF13407 Periplasmic binding protein domain JI729_RS02925 PF00356 Bacterial regulatory proteins, lacI family JI729_RS02935 PF00085 Thioredoxin JI729_RS02940 PF02600 Disulfide bond formation protein DsbB JI729_RS02945 PF14148 YhdB-like protein JI729_RS02955 PF03845 Spore germination protein JI729_RS02965 PF03323 Bacillus/Clostridium GerA spore germination protein JI729_RS02975 PF00881 Nitroreductase family JI729_RS02980 PF04293 SpoVR like protein JI729_RS02990 PF00089 Trypsin JI729_RS03000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JI729_RS03000 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS03005 PF02583 Metal-sensitive transcriptional repressor JI729_RS03010 PF01206 Sulfurtransferase TusA JI729_RS03010 PF00581 Rhodanese-like domain JI729_RS03015 PF00581 Rhodanese-like domain JI729_RS03015 PF00753 Metallo-beta-lactamase superfamily JI729_RS03020 PF01206 Sulfurtransferase TusA JI729_RS03025 PF01206 Sulfurtransferase TusA JI729_RS03035 PF01206 Sulfurtransferase TusA JI729_RS03035 PF00581 Rhodanese-like domain JI729_RS03045 PF13686 DsrE/DsrF/DrsH-like family JI729_RS03050 PF01925 Sulfite exporter TauE/SafE JI729_RS03060 PF03816 Cell envelope-related transcriptional attenuator domain JI729_RS03065 PF00107 Zinc-binding dehydrogenase JI729_RS03065 PF08240 Alcohol dehydrogenase GroES-like domain JI729_RS03070 PF02690 Na+/Pi-cotransporter JI729_RS03075 PF07690 Major Facilitator Superfamily JI729_RS03085 PF08279 HTH domain JI729_RS03085 PF05043 Mga helix-turn-helix domain JI729_RS03085 PF00874 PRD domain JI729_RS03085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JI729_RS03090 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JI729_RS03095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JI729_RS03100 PF02378 Phosphotransferase system, EIIC JI729_RS03120 PF01476 LysM domain JI729_RS03120 PF06725 3D domain JI729_RS03125 PF02687 FtsX-like permease family JI729_RS03125 PF12704 MacB-like periplasmic core domain JI729_RS03130 PF00005 ABC transporter JI729_RS03140 PF09529 Integral membrane protein (intg_mem_TP0381) JI729_RS03155 PF05525 Branched-chain amino acid transport protein JI729_RS03160 PF05067 Manganese containing catalase JI729_RS03165 PF12652 CotJB protein JI729_RS03170 PF11007 Spore coat associated protein JA (CotJA) JI729_RS03185 PF02735 Ku70/Ku80 beta-barrel domain JI729_RS03195 PF09335 SNARE associated Golgi protein JI729_RS03230 PF13520 Amino acid permease JI729_RS03235 PF00999 Sodium/hydrogen exchanger family JI729_RS03245 PF01418 Helix-turn-helix domain, rpiR family JI729_RS03245 PF01380 SIS domain JI729_RS03250 PF13580 SIS domain JI729_RS03255 PF00367 phosphotransferase system, EIIB JI729_RS03255 PF02378 Phosphotransferase system, EIIC JI729_RS03265 PF07681 DoxX JI729_RS03280 PF00892 EamA-like transporter family JI729_RS03285 PF01037 Lrp/AsnC ligand binding domain JI729_RS03290 PF00583 Acetyltransferase (GNAT) family JI729_RS03290 PF14698 Argininosuccinate lyase C-terminal JI729_RS03290 PF00206 Lyase JI729_RS03295 PF00106 short chain dehydrogenase JI729_RS03300 PF13411 MerR HTH family regulatory protein JI729_RS03305 PF00893 Small Multidrug Resistance protein JI729_RS03315 PF00440 Bacterial regulatory proteins, tetR family JI729_RS03315 PF17934 Tetracyclin repressor-like, C-terminal domain JI729_RS03320 PF07690 Major Facilitator Superfamily JI729_RS03325 PF01638 HxlR-like helix-turn-helix JI729_RS03335 PF02525 Flavodoxin-like fold JI729_RS03350 PF01965 DJ-1/PfpI family JI729_RS03355 PF18011 C-terminal domain found in long catalases JI729_RS03355 PF06628 Catalase-related immune-responsive JI729_RS03355 PF00199 Catalase JI729_RS03365 PF13520 Amino acid permease JI729_RS03370 PF01177 Asp/Glu/Hydantoin racemase JI729_RS03380 PF00171 Aldehyde dehydrogenase family JI729_RS03385 PF00005 ABC transporter JI729_RS03385 PF00664 ABC transporter transmembrane region JI729_RS03390 PF00005 ABC transporter JI729_RS03390 PF00664 ABC transporter transmembrane region JI729_RS03395 PF00497 Bacterial extracellular solute-binding proteins, family 3 JI729_RS03400 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS03405 PF00005 ABC transporter JI729_RS03410 PF00269 Small, acid-soluble spore proteins, alpha/beta type JI729_RS03420 PF14398 YheC/D like ATP-grasp JI729_RS03430 PF04286 Protein of unknown function (DUF445) JI729_RS03435 PF06133 Control of competence regulator ComK, YlbF/YmcA JI729_RS03445 PF07730 Histidine kinase JI729_RS03445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS03450 PF00196 Bacterial regulatory proteins, luxR family JI729_RS03450 PF00072 Response regulator receiver domain JI729_RS03495 PF00205 Thiamine pyrophosphate enzyme, central domain JI729_RS03495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JI729_RS03495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JI729_RS03500 PF03306 Alpha-acetolactate decarboxylase JI729_RS03515 PF04650 YSIRK type signal peptide JI729_RS03515 PF10425 C-terminus of bacterial fibrinogen-binding adhesin JI729_RS03515 PF17210 SdrD B-like domain JI729_RS03515 PF00746 LPXTG cell wall anchor motif JI729_RS03515 PF17961 Bacterial Ig domain JI729_RS03520 PF01510 N-acetylmuramoyl-L-alanine amidase JI729_RS03520 PF01471 Putative peptidoglycan binding domain JI729_RS03525 PF04055 Radical SAM superfamily JI729_RS03530 PF13193 AMP-binding enzyme C-terminal domain JI729_RS03530 PF00501 AMP-binding enzyme JI729_RS03545 PF01740 STAS domain JI729_RS03545 PF00916 Sulfate permease family JI729_RS03550 PF14667 Polysaccharide biosynthesis C-terminal domain JI729_RS03550 PF01943 Polysaccharide biosynthesis protein JI729_RS03570 PF00378 Enoyl-CoA hydratase/isomerase JI729_RS03590 PF05343 M42 glutamyl aminopeptidase JI729_RS03595 PF00395 S-layer homology domain JI729_RS03595 PF01520 N-acetylmuramoyl-L-alanine amidase JI729_RS03605 PF11121 Protein of unknown function (DUF2639) JI729_RS03610 PF05544 Proline racemase JI729_RS03615 PF02423 Ornithine cyclodeaminase/mu-crystallin family JI729_RS03625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JI729_RS03630 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS03635 PF12911 N-terminal TM domain of oligopeptide transport permease C JI729_RS03635 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS03640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JI729_RS03640 PF00005 ABC transporter JI729_RS03645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JI729_RS03645 PF00005 ABC transporter JI729_RS03670 PF16123 Hydroxyacylglutathione hydrolase C-terminus JI729_RS03670 PF00753 Metallo-beta-lactamase superfamily JI729_RS03685 PF00005 ABC transporter JI729_RS03685 PF02687 FtsX-like permease family JI729_RS03685 PF12704 MacB-like periplasmic core domain JI729_RS03720 PF02423 Ornithine cyclodeaminase/mu-crystallin family JI729_RS03725 PF06013 Proteins of 100 residues with WXG JI729_RS03740 PF14436 Bacterial EndoU nuclease JI729_RS03740 PF04740 LXG domain of WXG superfamily JI729_RS03865 PF00083 Sugar (and other) transporter JI729_RS03870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS03870 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JI729_RS03875 PF00072 Response regulator receiver domain JI729_RS03875 PF12431 Transcriptional regulator JI729_RS03875 PF08279 HTH domain JI729_RS03880 PF03401 Tripartite tricarboxylate transporter family receptor JI729_RS03890 PF02976 DNA mismatch repair enzyme MutH JI729_RS03895 PF00145 C-5 cytosine-specific DNA methylase JI729_RS03905 PF01695 IstB-like ATP binding protein JI729_RS03940 PF00772 DnaB-like helicase N terminal domain JI729_RS03940 PF03796 DnaB-like helicase C terminal domain JI729_RS03955 PF01925 Sulfite exporter TauE/SafE JI729_RS03965 PF02954 Bacterial regulatory protein, Fis family JI729_RS03965 PF13426 PAS domain JI729_RS03965 PF00158 Sigma-54 interaction domain JI729_RS03970 PF07722 Peptidase C26 JI729_RS03975 PF03606 C4-dicarboxylate anaerobic carrier JI729_RS03990 PF07690 Major Facilitator Superfamily JI729_RS04005 PF09680 Family of unknown function JI729_RS04010 PF13302 Acetyltransferase (GNAT) domain JI729_RS04045 PF06013 Proteins of 100 residues with WXG JI729_RS04120 PF13026 Protein of unknown function (DUF3887) JI729_RS04120 PF12146 Serine aminopeptidase, S33 JI729_RS04140 PF12833 Helix-turn-helix domain JI729_RS04140 PF02805 Metal binding domain of Ada JI729_RS04185 PF01066 CDP-alcohol phosphatidyltransferase JI729_RS04205 PF02733 Dak1 domain JI729_RS04215 PF02733 Dak1 domain JI729_RS04245 PF00395 S-layer homology domain JI729_RS04290 PF11181 Heat induced stress protein YflT JI729_RS04315 PF01740 STAS domain JI729_RS04320 PF13581 Histidine kinase-like ATPase domain JI729_RS04325 PF04542 Sigma-70 region 2 JI729_RS04325 PF04539 Sigma-70 region 3 JI729_RS04325 PF04545 Sigma-70, region 4 JI729_RS04335 PF13426 PAS domain JI729_RS04335 PF07228 Stage II sporulation protein E (SpoIIE) JI729_RS04340 PF01739 CheR methyltransferase, SAM binding domain JI729_RS04340 PF03705 CheR methyltransferase, all-alpha domain JI729_RS04345 PF00672 HAMP domain JI729_RS04345 PF00072 Response regulator receiver domain JI729_RS04345 PF01627 Hpt domain JI729_RS04345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JI729_RS04345 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS04345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS04370 PF01906 Putative heavy-metal-binding JI729_RS04385 PF07282 Putative transposase DNA-binding domain JI729_RS04385 PF01385 Probable transposase JI729_RS04385 PF12323 Helix-turn-helix domain JI729_RS04390 PF08240 Alcohol dehydrogenase GroES-like domain JI729_RS04390 PF00107 Zinc-binding dehydrogenase JI729_RS04395 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JI729_RS04400 PF11121 Protein of unknown function (DUF2639) JI729_RS04415 PF00149 Calcineurin-like phosphoesterase JI729_RS04420 PF13514 AAA domain JI729_RS04425 PF01336 OB-fold nucleic acid binding domain JI729_RS04425 PF01966 HD domain JI729_RS04430 PF00144 Beta-lactamase JI729_RS04445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS04450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS04455 PF17874 MalT-like TPR region JI729_RS04455 PF18801 response regulator aspartate phosphatase H, N terminal JI729_RS04465 PF08386 TAP-like protein JI729_RS04465 PF00561 alpha/beta hydrolase fold JI729_RS04470 PF14147 Sporulation protein YhaL JI729_RS04485 PF00190 Cupin JI729_RS04495 PF04309 Glycerol-3-phosphate responsive antiterminator JI729_RS04500 PF00230 Major intrinsic protein JI729_RS04505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JI729_RS04505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JI729_RS04510 PF01266 FAD dependent oxidoreductase JI729_RS04510 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JI729_RS04515 PF03551 Transcriptional regulator PadR-like family JI729_RS04530 PF08281 Sigma-70, region 4 JI729_RS04530 PF04542 Sigma-70 region 2 JI729_RS04540 PF01098 Cell cycle protein JI729_RS04555 PF13538 UvrD-like helicase C-terminal domain JI729_RS04575 PF01047 MarR family JI729_RS04580 PF12732 YtxH-like protein JI729_RS04585 PF01230 HIT domain JI729_RS04590 PF00005 ABC transporter JI729_RS04595 PF05975 Bacterial ABC transporter protein EcsB JI729_RS04600 PF12787 EcsC protein family JI729_RS04610 PF00440 Bacterial regulatory proteins, tetR family JI729_RS04610 PF17934 Tetracyclin repressor-like, C-terminal domain JI729_RS04620 PF03703 Bacterial PH domain JI729_RS04625 PF03703 Bacterial PH domain JI729_RS04650 PF10014 2OG-Fe dioxygenase JI729_RS04660 PF00892 EamA-like transporter family JI729_RS04665 PF03703 Bacterial PH domain JI729_RS04670 PF03703 Bacterial PH domain JI729_RS04675 PF03992 Antibiotic biosynthesis monooxygenase JI729_RS04680 PF00912 Transglycosylase JI729_RS04680 PF00905 Penicillin binding protein transpeptidase domain JI729_RS04685 PF01208 Uroporphyrinogen decarboxylase (URO-D) JI729_RS04690 PF00762 Ferrochelatase JI729_RS04695 PF01593 Flavin containing amine oxidoreductase JI729_RS04720 PF03965 Penicillinase repressor JI729_RS04730 PF17932 Tetracyclin repressor-like, C-terminal domain JI729_RS04730 PF00440 Bacterial regulatory proteins, tetR family JI729_RS04765 PF13302 Acetyltransferase (GNAT) domain JI729_RS04770 PF00356 Bacterial regulatory proteins, lacI family JI729_RS04775 PF14149 YhfH-like protein JI729_RS04780 PF12706 Beta-lactamase superfamily domain JI729_RS04785 PF03099 Biotin/lipoate A/B protein ligase family JI729_RS04785 PF10437 Bacterial lipoate protein ligase C-terminus JI729_RS04795 PF00501 AMP-binding enzyme JI729_RS04795 PF13193 AMP-binding enzyme C-terminal domain JI729_RS04800 PF00395 S-layer homology domain JI729_RS04800 PF01520 N-acetylmuramoyl-L-alanine amidase JI729_RS04810 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS04815 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS04820 PF12857 TOBE-like domain JI729_RS04820 PF17850 CysA C-terminal regulatory domain JI729_RS04820 PF00005 ABC transporter JI729_RS04890 PF07968 Leukocidin/Hemolysin toxin family JI729_RS04900 PF00149 Calcineurin-like phosphoesterase JI729_RS04905 PF01966 HD domain JI729_RS04910 PF13791 Sigma factor regulator C-terminal JI729_RS04910 PF13800 Sigma factor regulator N-terminal JI729_RS04915 PF04542 Sigma-70 region 2 JI729_RS04915 PF08281 Sigma-70, region 4 JI729_RS04920 PF12833 Helix-turn-helix domain JI729_RS04920 PF06445 GyrI-like small molecule binding domain JI729_RS04930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS04930 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS04935 PF00486 Transcriptional regulatory protein, C terminal JI729_RS04935 PF00072 Response regulator receiver domain JI729_RS04960 PF16491 CAAX prenyl protease N-terminal, five membrane helices JI729_RS04960 PF01435 Peptidase family M48 JI729_RS04965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS04965 PF00672 HAMP domain JI729_RS04965 PF02743 Cache domain JI729_RS04970 PF00395 S-layer homology domain JI729_RS04970 PF06452 Carbohydrate family 9 binding domain-like JI729_RS04970 PF00331 Glycosyl hydrolase family 10 JI729_RS04970 PF02018 Carbohydrate binding domain JI729_RS04980 PF01274 Malate synthase JI729_RS04985 PF00463 Isocitrate lyase family JI729_RS05000 PF00313 'Cold-shock' DNA-binding domain JI729_RS05020 PF09335 SNARE associated Golgi protein JI729_RS05025 PF10502 Signal peptidase, peptidase S26 JI729_RS05030 PF12705 PD-(D/E)XK nuclease superfamily JI729_RS05030 PF13361 UvrD-like helicase C-terminal domain JI729_RS05035 PF12705 PD-(D/E)XK nuclease superfamily JI729_RS05035 PF00580 UvrD/REP helicase N-terminal domain JI729_RS05035 PF13361 UvrD-like helicase C-terminal domain JI729_RS05045 PF10676 Spore germination protein gerPA/gerPF JI729_RS05050 PF10970 Spore germination protein GerPE JI729_RS05060 PF10737 Spore germination protein GerPC JI729_RS05065 PF10803 Spore germination GerPB JI729_RS05070 PF10676 Spore germination protein gerPA/gerPF JI729_RS05075 PF09388 Spo0E like sporulation regulatory protein JI729_RS05080 PF01557 Fumarylacetoacetate (FAA) hydrolase family JI729_RS05090 PF00202 Aminotransferase class-III JI729_RS05095 PF07457 Protein of unknown function (DUF1516) JI729_RS05105 PF13537 Glutamine amidotransferase domain JI729_RS05105 PF00733 Asparagine synthase JI729_RS05110 PF00762 Ferrochelatase JI729_RS05115 PF06628 Catalase-related immune-responsive JI729_RS05115 PF00199 Catalase JI729_RS05120 PF00909 Ammonium Transporter Family JI729_RS05125 PF00128 Alpha amylase, catalytic domain JI729_RS05135 PF04461 Protein of unknown function (DUF520) JI729_RS05140 PF13509 S1 domain JI729_RS05140 PF17783 CvfB-like winged helix domain JI729_RS05155 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JI729_RS05155 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JI729_RS05160 PF12758 Protein of unknown function (DUF3813) JI729_RS05175 PF14168 YjzC-like protein JI729_RS05180 PF02861 Clp amino terminal domain, pathogenicity island component JI729_RS05180 PF17871 AAA lid domain JI729_RS05180 PF07724 AAA domain (Cdc48 subfamily) JI729_RS05180 PF00004 ATPase family associated with various cellular activities (AAA) JI729_RS05180 PF10431 C-terminal, D2-small domain, of ClpB protein JI729_RS05200 PF10815 ComZ JI729_RS05205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JI729_RS05205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JI729_RS05210 PF00109 Beta-ketoacyl synthase, N-terminal domain JI729_RS05210 PF02801 Beta-ketoacyl synthase, C-terminal domain JI729_RS05215 PF10026 Predicted Zn-dependent protease (DUF2268) JI729_RS05220 PF12227 Protein of unknown function (DUF3603) JI729_RS05225 PF00579 tRNA synthetases class I (W and Y) JI729_RS05235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JI729_RS05240 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS05245 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS05245 PF12911 N-terminal TM domain of oligopeptide transport permease C JI729_RS05250 PF00005 ABC transporter JI729_RS05250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JI729_RS05255 PF00005 ABC transporter JI729_RS05255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JI729_RS05260 PF01554 MatE JI729_RS05265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JI729_RS05275 PF03960 ArsC family JI729_RS05280 PF03741 Integral membrane protein TerC family JI729_RS05285 PF05389 Negative regulator of genetic competence (MecA) JI729_RS05290 PF13396 Phospholipase_D-nuclease N-terminal JI729_RS05290 PF13091 PLD-like domain JI729_RS05300 PF01432 Peptidase family M3 JI729_RS05300 PF08439 Oligopeptidase F JI729_RS05315 PF01152 Bacterial-like globin JI729_RS05320 PF01928 CYTH domain JI729_RS05330 PF04607 Region found in RelA / SpoT proteins JI729_RS05335 PF01513 ATP-NAD kinase JI729_RS05340 PF00849 RNA pseudouridylate synthase JI729_RS05350 PF00149 Calcineurin-like phosphoesterase JI729_RS05355 PF01098 Cell cycle protein JI729_RS05360 PF00535 Glycosyl transferase family 2 JI729_RS05365 PF08241 Methyltransferase domain JI729_RS05370 PF05711 Macrocin-O-methyltransferase (TylF) JI729_RS05380 PF13181 Tetratricopeptide repeat JI729_RS05380 PF00535 Glycosyl transferase family 2 JI729_RS05400 PF00483 Nucleotidyl transferase JI729_RS05405 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JI729_RS05410 PF16363 GDP-mannose 4,6 dehydratase JI729_RS05415 PF04321 RmlD substrate binding domain JI729_RS05435 PF07098 Protein of unknown function (DUF1360) JI729_RS05455 PF13361 UvrD-like helicase C-terminal domain JI729_RS05455 PF00580 UvrD/REP helicase N-terminal domain JI729_RS05460 PF13673 Acetyltransferase (GNAT) domain JI729_RS05470 PF00756 Putative esterase JI729_RS05485 PF02368 Bacterial Ig-like domain (group 2) JI729_RS05490 PF00474 Sodium:solute symporter family JI729_RS05495 PF04715 Anthranilate synthase component I, N terminal region JI729_RS05495 PF00425 chorismate binding enzyme JI729_RS05500 PF00117 Glutamine amidotransferase class-I JI729_RS05500 PF02885 Glycosyl transferase family, helical bundle domain JI729_RS05500 PF00591 Glycosyl transferase family, a/b domain JI729_RS05505 PF02885 Glycosyl transferase family, helical bundle domain JI729_RS05505 PF00591 Glycosyl transferase family, a/b domain JI729_RS05510 PF00218 Indole-3-glycerol phosphate synthase JI729_RS05515 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JI729_RS05520 PF00291 Pyridoxal-phosphate dependent enzyme JI729_RS05525 PF00290 Tryptophan synthase alpha chain JI729_RS05535 PF02652 L-lactate permease JI729_RS05540 PF10042 Uncharacterized conserved protein (DUF2278) JI729_RS05565 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS05565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JI729_RS05575 PF00881 Nitroreductase family JI729_RS05590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JI729_RS05590 PF00364 Biotin-requiring enzyme JI729_RS05590 PF02817 e3 binding domain JI729_RS05595 PF16870 2-oxoglutarate dehydrogenase C-terminal JI729_RS05595 PF00676 Dehydrogenase E1 component JI729_RS05595 PF02779 Transketolase, pyrimidine binding domain JI729_RS05640 PF07943 Penicillin-binding protein 5, C-terminal domain JI729_RS05640 PF00768 D-alanyl-D-alanine carboxypeptidase JI729_RS05650 PF12389 Camelysin metallo-endopeptidase JI729_RS05660 PF12389 Camelysin metallo-endopeptidase JI729_RS05665 PF01381 Helix-turn-helix JI729_RS05665 PF08671 Anti-repressor SinI JI729_RS05675 PF05547 Immune inhibitor A peptidase M6 JI729_RS05680 PF00171 Aldehyde dehydrogenase family JI729_RS05685 PF08402 TOBE domain JI729_RS05685 PF00005 ABC transporter JI729_RS05690 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS05695 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS05700 PF13416 Bacterial extracellular solute-binding protein JI729_RS05705 PF01569 PAP2 superfamily JI729_RS05710 PF03176 MMPL family JI729_RS05720 PF00849 RNA pseudouridylate synthase JI729_RS05720 PF01479 S4 domain JI729_RS05730 PF00188 Cysteine-rich secretory protein family JI729_RS05735 PF13183 4Fe-4S dicluster domain JI729_RS05735 PF02754 Cysteine-rich domain JI729_RS05740 PF01565 FAD binding domain JI729_RS05740 PF02913 FAD linked oxidases, C-terminal domain JI729_RS05745 PF17853 GGDEF-like domain JI729_RS05745 PF05651 Putative sugar diacid recognition JI729_RS05745 PF13556 PucR C-terminal helix-turn-helix domain JI729_RS05755 PF00072 Response regulator receiver domain JI729_RS05755 PF00486 Transcriptional regulatory protein, C terminal JI729_RS05760 PF00672 HAMP domain JI729_RS05760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS05760 PF18698 Histidine kinase sensor domain JI729_RS05760 PF00989 PAS fold JI729_RS05760 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS05765 PF00392 Bacterial regulatory proteins, gntR family JI729_RS05765 PF07729 FCD domain JI729_RS05770 PF02754 Cysteine-rich domain JI729_RS05775 PF11870 Domain of unknown function (DUF3390) JI729_RS05775 PF13183 4Fe-4S dicluster domain JI729_RS05775 PF02589 LUD domain JI729_RS05780 PF02589 LUD domain JI729_RS05785 PF01478 Type IV leader peptidase family JI729_RS05785 PF06750 Bacterial Peptidase A24 N-terminal domain JI729_RS05795 PF01226 Formate/nitrite transporter JI729_RS05800 PF03741 Integral membrane protein TerC family JI729_RS05805 PF02386 Cation transport protein JI729_RS05810 PF00269 Small, acid-soluble spore proteins, alpha/beta type JI729_RS05815 PF01575 MaoC like domain JI729_RS05840 PF00561 alpha/beta hydrolase fold JI729_RS05850 PF02386 Cation transport protein JI729_RS05870 PF00005 ABC transporter JI729_RS05870 PF08402 TOBE domain JI729_RS05875 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS05880 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS05885 PF00266 Aminotransferase class-V JI729_RS05895 PF08220 DeoR-like helix-turn-helix domain JI729_RS05895 PF00455 DeoR C terminal sensor domain JI729_RS05905 PF00596 Class II Aldolase and Adducin N-terminal domain JI729_RS05915 PF04748 Divergent polysaccharide deacetylase JI729_RS05920 PF09388 Spo0E like sporulation regulatory protein JI729_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS05925 PF02743 Cache domain JI729_RS05925 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS05930 PF01047 MarR family JI729_RS05940 PF12867 DinB superfamily JI729_RS05945 PF13426 PAS domain JI729_RS05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS05945 PF00989 PAS fold JI729_RS05945 PF13188 PAS domain JI729_RS05945 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS05950 PF06508 Queuosine biosynthesis protein QueC JI729_RS05955 PF01242 6-pyruvoyl tetrahydropterin synthase JI729_RS05960 PF04055 Radical SAM superfamily JI729_RS05965 PF14489 QueF-like protein JI729_RS05970 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JI729_RS06000 PF07972 NrdI Flavodoxin like JI729_RS06005 PF08343 Ribonucleotide reductase N-terminal JI729_RS06005 PF00317 Ribonucleotide reductase, all-alpha domain JI729_RS06005 PF02867 Ribonucleotide reductase, barrel domain JI729_RS06015 PF13392 HNH endonuclease JI729_RS06020 PF00268 Ribonucleotide reductase, small chain JI729_RS06025 PF00392 Bacterial regulatory proteins, gntR family JI729_RS06030 PF00005 ABC transporter JI729_RS06040 PF00005 ABC transporter JI729_RS06060 PF01037 Lrp/AsnC ligand binding domain JI729_RS06070 PF00857 Isochorismatase family JI729_RS06080 PF02016 LD-carboxypeptidase N-terminal domain JI729_RS06080 PF17676 LD-carboxypeptidase C-terminal domain JI729_RS06085 PF03060 Nitronate monooxygenase JI729_RS06090 PF04914 DltD protein JI729_RS06095 PF00550 Phosphopantetheine attachment site JI729_RS06100 PF03062 MBOAT, membrane-bound O-acyltransferase family JI729_RS06105 PF13193 AMP-binding enzyme C-terminal domain JI729_RS06105 PF00501 AMP-binding enzyme JI729_RS06115 PF01546 Peptidase family M20/M25/M40 JI729_RS06115 PF07687 Peptidase dimerisation domain JI729_RS06125 PF00258 Flavodoxin JI729_RS06140 PF01636 Phosphotransferase enzyme family JI729_RS06160 PF01554 MatE JI729_RS06165 PF02673 Bacitracin resistance protein BacA JI729_RS06180 PF01047 MarR family JI729_RS06190 PF00375 Sodium:dicarboxylate symporter family JI729_RS06195 PF02386 Cation transport protein JI729_RS06205 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JI729_RS06215 PF03698 Uncharacterised protein family (UPF0180) JI729_RS06225 PF01063 Amino-transferase class IV JI729_RS06230 PF00205 Thiamine pyrophosphate enzyme, central domain JI729_RS06230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JI729_RS06230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JI729_RS06235 PF01842 ACT domain JI729_RS06235 PF10369 Small subunit of acetolactate synthase JI729_RS06240 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JI729_RS06240 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JI729_RS06245 PF00682 HMGL-like JI729_RS06245 PF08502 LeuA allosteric (dimerisation) domain JI729_RS06250 PF00180 Isocitrate/isopropylmalate dehydrogenase JI729_RS06255 PF00330 Aconitase family (aconitate hydratase) JI729_RS06260 PF00694 Aconitase C-terminal domain JI729_RS06265 PF13393 Histidyl-tRNA synthetase JI729_RS06270 PF01634 ATP phosphoribosyltransferase JI729_RS06275 PF00815 Histidinol dehydrogenase JI729_RS06280 PF00475 Imidazoleglycerol-phosphate dehydratase JI729_RS06285 PF00117 Glutamine amidotransferase class-I JI729_RS06290 PF00977 Histidine biosynthesis protein JI729_RS06295 PF00977 Histidine biosynthesis protein JI729_RS06300 PF01502 Phosphoribosyl-AMP cyclohydrolase JI729_RS06305 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JI729_RS06310 PF02811 PHP domain JI729_RS06320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JI729_RS06320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JI729_RS06325 PF01066 CDP-alcohol phosphatidyltransferase JI729_RS06330 PF00884 Sulfatase JI729_RS06340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JI729_RS06340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JI729_RS06350 PF01507 Phosphoadenosine phosphosulfate reductase family JI729_RS06355 PF14306 PUA-like domain JI729_RS06355 PF01747 ATP-sulfurylase JI729_RS06365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JI729_RS06365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JI729_RS06375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JI729_RS06380 PF01903 CbiX JI729_RS06390 PF00209 Sodium:neurotransmitter symporter family JI729_RS06405 PF00375 Sodium:dicarboxylate symporter family JI729_RS06415 PF03553 Na+/H+ antiporter family JI729_RS06430 PF09922 Cell wall-active antibiotics response 4TMS YvqF JI729_RS06435 PF00672 HAMP domain JI729_RS06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS06435 PF07730 Histidine kinase JI729_RS06440 PF00072 Response regulator receiver domain JI729_RS06440 PF00196 Bacterial regulatory proteins, luxR family JI729_RS06450 PF05525 Branched-chain amino acid transport protein JI729_RS06460 PF01209 ubiE/COQ5 methyltransferase family JI729_RS06485 PF00175 Oxidoreductase NAD-binding domain JI729_RS06485 PF00970 Oxidoreductase FAD-binding domain JI729_RS06485 PF00042 Globin JI729_RS06500 PF01925 Sulfite exporter TauE/SafE JI729_RS06505 PF01384 Phosphate transporter family JI729_RS06510 PF01865 Protein of unknown function DUF47 JI729_RS06515 PF00912 Transglycosylase JI729_RS06515 PF00905 Penicillin binding protein transpeptidase domain JI729_RS06530 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS06530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS06530 PF00989 PAS fold JI729_RS06535 PF01904 Protein of unknown function DUF72 JI729_RS06545 PF00589 Phage integrase family JI729_RS06550 PF16736 Single Cache-like JI729_RS06550 PF00989 PAS fold JI729_RS06550 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS06550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS06555 PF01048 Phosphorylase superfamily JI729_RS06565 PF09924 Uncharacterised conserved protein (DUF2156) JI729_RS06565 PF03706 Lysylphosphatidylglycerol synthase TM region JI729_RS06580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JI729_RS06580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JI729_RS06585 PF07943 Penicillin-binding protein 5, C-terminal domain JI729_RS06585 PF00768 D-alanyl-D-alanine carboxypeptidase JI729_RS06590 PF07670 Nucleoside recognition JI729_RS06595 PF07670 Nucleoside recognition JI729_RS06600 PF00849 RNA pseudouridylate synthase JI729_RS06600 PF01479 S4 domain JI729_RS06605 PF00578 AhpC/TSA family JI729_RS06610 PF05140 ResB-like family JI729_RS06615 PF01578 Cytochrome C assembly protein JI729_RS06620 PF00486 Transcriptional regulatory protein, C terminal JI729_RS06620 PF00072 Response regulator receiver domain JI729_RS06625 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS06625 PF18698 Histidine kinase sensor domain JI729_RS06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS06625 PF00989 PAS fold JI729_RS06625 PF00672 HAMP domain JI729_RS06630 PF01923 Cobalamin adenosyltransferase JI729_RS06645 PF12822 ECF transporter, substrate-specific component JI729_RS06660 PF00270 DEAD/DEAH box helicase JI729_RS06660 PF00271 Helicase conserved C-terminal domain JI729_RS06665 PF02517 CPBP intramembrane metalloprotease JI729_RS06675 PF00149 Calcineurin-like phosphoesterase JI729_RS06680 PF13411 MerR HTH family regulatory protein JI729_RS06685 PF05389 Negative regulator of genetic competence (MecA) JI729_RS06690 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JI729_RS06690 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JI729_RS06715 PF17763 Glutaminase/Asparaginase C-terminal domain JI729_RS06715 PF00710 Asparaginase, N-terminal JI729_RS06725 PF02224 Cytidylate kinase JI729_RS06730 PF00575 S1 RNA binding domain JI729_RS06735 PF01070 FMN-dependent dehydrogenase JI729_RS06740 PF14140 YpzI-like protein JI729_RS06750 PF14045 YIEGIA protein JI729_RS06760 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JI729_RS06760 PF01926 50S ribosome-binding GTPase JI729_RS06765 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JI729_RS06765 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JI729_RS06775 PF10966 Protein of unknown function (DUF2768) JI729_RS06785 PF09547 Stage IV sporulation protein A (spore_IV_A) JI729_RS06790 PF00216 Bacterial DNA-binding protein JI729_RS06795 PF01227 GTP cyclohydrolase I JI729_RS06800 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JI729_RS06805 PF01209 ubiE/COQ5 methyltransferase family JI729_RS06810 PF00348 Polyprenyl synthetase JI729_RS06815 PF00334 Nucleoside diphosphate kinase JI729_RS06820 PF01264 Chorismate synthase JI729_RS06825 PF01761 3-dehydroquinate synthase JI729_RS06830 PF00155 Aminotransferase class I and II JI729_RS06840 PF08858 IDEAL domain JI729_RS06840 PF08864 UPF0302 domain JI729_RS06845 PF10673 Protein of unknown function (DUF2487) JI729_RS06850 PF00355 Rieske [2Fe-2S] domain JI729_RS06855 PF00033 Cytochrome b/b6/petB JI729_RS06860 PF00032 Cytochrome b(C-terminal)/b6/petD JI729_RS06860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JI729_RS06865 PF07187 Protein of unknown function (DUF1405) JI729_RS06875 PF09577 Sporulation protein YpjB (SpoYpjB) JI729_RS06880 PF04298 Putative neutral zinc metallopeptidase JI729_RS06890 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JI729_RS06890 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JI729_RS06895 PF03819 MazG nucleotide pyrophosphohydrolase domain JI729_RS06900 PF05173 Dihydrodipicolinate reductase, C-terminus JI729_RS06900 PF01113 Dihydrodipicolinate reductase, N-terminus JI729_RS06905 PF02142 MGS-like domain JI729_RS06910 PF02585 GlcNAc-PI de-N-acetylase JI729_RS06915 PF13439 Glycosyltransferase Family 4 JI729_RS06915 PF00534 Glycosyl transferases group 1 JI729_RS06920 PF12627 Probable RNA and SrmB- binding site of polymerase A JI729_RS06920 PF13735 tRNA nucleotidyltransferase domain 2 putative JI729_RS06920 PF01743 Poly A polymerase head domain JI729_RS06925 PF08279 HTH domain JI729_RS06925 PF03099 Biotin/lipoate A/B protein ligase family JI729_RS06925 PF02237 Biotin protein ligase C terminal domain JI729_RS06935 PF02548 Ketopantoate hydroxymethyltransferase JI729_RS06940 PF02569 Pantoate-beta-alanine ligase JI729_RS06945 PF02261 Aspartate decarboxylase JI729_RS06950 PF04851 Type III restriction enzyme, res subunit JI729_RS06950 PF13307 Helicase C-terminal domain JI729_RS06950 PF00929 Exonuclease JI729_RS06955 PF14084 Protein of unknown function (DUF4264) JI729_RS06965 PF00155 Aminotransferase class I and II JI729_RS06970 PF07261 Replication initiation and membrane attachment JI729_RS06975 PF00730 HhH-GPD superfamily base excision DNA repair protein JI729_RS06975 PF00633 Helix-hairpin-helix motif JI729_RS06975 PF10576 Iron-sulfur binding domain of endonuclease III JI729_RS06985 PF00905 Penicillin binding protein transpeptidase domain JI729_RS06985 PF00912 Transglycosylase JI729_RS06990 PF03838 Recombination protein U JI729_RS06995 PF10720 Protein of unknown function (DUF2515) JI729_RS07025 PF06908 YspA SLOG family JI729_RS07030 PF05103 DivIVA protein JI729_RS07040 PF02926 THUMP domain JI729_RS07040 PF01170 Putative RNA methylase family UPF0020 JI729_RS07050 PF13307 Helicase C-terminal domain JI729_RS07055 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JI729_RS07065 PF00557 Metallopeptidase family M24 JI729_RS07070 PF00156 Phosphoribosyl transferase domain JI729_RS07075 PF00860 Permease family JI729_RS07080 PF04235 Protein of unknown function (DUF418) JI729_RS07085 PF00350 Dynamin family JI729_RS07095 PF00583 Acetyltransferase (GNAT) family JI729_RS07100 PF10752 Protein of unknown function (DUF2533) JI729_RS07105 PF00581 Rhodanese-like domain JI729_RS07140 PF00689 Cation transporting ATPase, C-terminus JI729_RS07140 PF00690 Cation transporter/ATPase, N-terminus JI729_RS07145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JI729_RS07145 PF01367 5'-3' exonuclease, C-terminal SAM fold JI729_RS07160 PF02706 Chain length determinant protein JI729_RS07160 PF13807 G-rich domain on putative tyrosine kinase JI729_RS07170 PF02397 Bacterial sugar transferase JI729_RS07185 PF00535 Glycosyl transferase family 2 JI729_RS07190 PF13439 Glycosyltransferase Family 4 JI729_RS07190 PF00534 Glycosyl transferases group 1 JI729_RS07205 PF13673 Acetyltransferase (GNAT) domain JI729_RS07205 PF18014 Acetyltransferase (GNAT) domain JI729_RS07225 PF13456 Reverse transcriptase-like JI729_RS07230 PF01263 Aldose 1-epimerase JI729_RS07255 PF00313 'Cold-shock' DNA-binding domain JI729_RS07260 PF08892 YqcI/YcgG family JI729_RS07265 PF01810 LysE type translocator JI729_RS07285 PF00474 Sodium:solute symporter family JI729_RS07290 PF00202 Aminotransferase class-III JI729_RS07300 PF00999 Sodium/hydrogen exchanger family JI729_RS07305 PF00753 Metallo-beta-lactamase superfamily JI729_RS07305 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JI729_RS07305 PF17770 Ribonuclease J C-terminal domain JI729_RS07310 PF06445 GyrI-like small molecule binding domain JI729_RS07310 PF13411 MerR HTH family regulatory protein JI729_RS07320 PF04239 Protein of unknown function (DUF421) JI729_RS07325 PF02698 DUF218 domain JI729_RS07335 PF00881 Nitroreductase family JI729_RS07360 PF17209 Hfq protein JI729_RS07370 PF01618 MotA/TolQ/ExbB proton channel family JI729_RS07375 PF13677 Membrane MotB of proton-channel complex MotA/MotB JI729_RS07375 PF00691 OmpA family JI729_RS07380 PF00072 Response regulator receiver domain JI729_RS07385 PF07194 P2 response regulator binding domain JI729_RS07385 PF01627 Hpt domain JI729_RS07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS07385 PF02895 Signal transducing histidine kinase, homodimeric domain JI729_RS07385 PF01584 CheW-like domain JI729_RS07390 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JI729_RS07390 PF04509 CheC-like family JI729_RS07405 PF03705 CheR methyltransferase, all-alpha domain JI729_RS07405 PF01739 CheR methyltransferase, SAM binding domain JI729_RS07425 PF00460 Flagella basal body rod protein JI729_RS07425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JI729_RS07430 PF00700 Bacterial flagellin C-terminal helical region JI729_RS07430 PF00669 Bacterial flagellin N-terminal helical region JI729_RS07435 PF02465 Flagellar hook-associated protein 2 N-terminus JI729_RS07435 PF07196 Flagellin hook IN motif JI729_RS07435 PF07195 Flagellar hook-associated protein 2 C-terminus JI729_RS07450 PF00460 Flagella basal body rod protein JI729_RS07460 PF02049 Flagellar hook-basal body complex protein FliE JI729_RS07465 PF01514 Secretory protein of YscJ/FliF family JI729_RS07465 PF08345 Flagellar M-ring protein C-terminal JI729_RS07470 PF14842 FliG N-terminal domain JI729_RS07470 PF01706 FliG C-terminal domain JI729_RS07470 PF14841 FliG middle domain JI729_RS07480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JI729_RS07480 PF18269 T3SS EscN ATPase C-terminal domain JI729_RS07480 PF02874 ATP synthase alpha/beta family, beta-barrel domain JI729_RS07500 PF00460 Flagella basal body rod protein JI729_RS07500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JI729_RS07500 PF07559 Flagellar basal body protein FlaE JI729_RS07515 PF01584 CheW-like domain JI729_RS07515 PF00072 Response regulator receiver domain JI729_RS07520 PF12181 DNA binding domain of the motility gene repressor (MogR) JI729_RS07525 PF00700 Bacterial flagellin C-terminal helical region JI729_RS07525 PF00669 Bacterial flagellin N-terminal helical region JI729_RS07530 PF00669 Bacterial flagellin N-terminal helical region JI729_RS07530 PF00700 Bacterial flagellin C-terminal helical region JI729_RS07535 PF01464 Transglycosylase SLT domain JI729_RS07545 PF02154 Flagellar motor switch protein FliM JI729_RS07545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JI729_RS07550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JI729_RS07550 PF04509 CheC-like family JI729_RS07560 PF00813 FliP family JI729_RS07565 PF01313 Bacterial export proteins, family 3 JI729_RS07575 PF01312 FlhB HrpN YscU SpaS Family JI729_RS07580 PF00771 FHIPEP family JI729_RS07585 PF00448 SRP54-type protein, GTPase domain JI729_RS07590 PF00460 Flagella basal body rod protein JI729_RS07590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JI729_RS07595 PF01411 tRNA synthetases class II (A) JI729_RS07595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JI729_RS07595 PF02272 DHHA1 domain JI729_RS07630 PF03992 Antibiotic biosynthesis monooxygenase JI729_RS07635 PF08141 Small acid-soluble spore protein H family JI729_RS07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS07655 PF03466 LysR substrate binding domain JI729_RS07660 PF08402 TOBE domain JI729_RS07660 PF00005 ABC transporter JI729_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS07675 PF00753 Metallo-beta-lactamase superfamily JI729_RS07675 PF12706 Beta-lactamase superfamily domain JI729_RS07685 PF10787 Uncharacterised protein from bacillus cereus group JI729_RS07705 PF00300 Histidine phosphatase superfamily (branch 1) JI729_RS07715 PF00561 alpha/beta hydrolase fold JI729_RS07725 PF01047 MarR family JI729_RS07735 PF00733 Asparagine synthase JI729_RS07735 PF13537 Glutamine amidotransferase domain JI729_RS07755 PF01545 Cation efflux family JI729_RS07755 PF16916 Dimerisation domain of Zinc Transporter JI729_RS07765 PF00392 Bacterial regulatory proteins, gntR family JI729_RS07765 PF07729 FCD domain JI729_RS07770 PF00892 EamA-like transporter family JI729_RS07780 PF07683 Cobalamin synthesis protein cobW C-terminal domain JI729_RS07780 PF02492 CobW/HypB/UreG, nucleotide-binding domain JI729_RS07785 PF03773 Predicted permease JI729_RS07800 PF03553 Na+/H+ antiporter family JI729_RS07805 PF13411 MerR HTH family regulatory protein JI729_RS07815 PF10415 Fumarase C C-terminus JI729_RS07815 PF00206 Lyase JI729_RS07835 PF01554 MatE JI729_RS07840 PF03575 Peptidase family S51 JI729_RS07860 PF02683 Cytochrome C biogenesis protein transmembrane region JI729_RS07865 PF00578 AhpC/TSA family JI729_RS07880 PF00291 Pyridoxal-phosphate dependent enzyme JI729_RS07885 PF04286 Protein of unknown function (DUF445) JI729_RS07910 PF00196 Bacterial regulatory proteins, luxR family JI729_RS07910 PF00072 Response regulator receiver domain JI729_RS07915 PF07730 Histidine kinase JI729_RS07915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS07915 PF13492 GAF domain JI729_RS07915 PF13185 GAF domain JI729_RS07920 PF00005 ABC transporter JI729_RS07940 PF13091 PLD-like domain JI729_RS07945 PF00696 Amino acid kinase family JI729_RS07950 PF00375 Sodium:dicarboxylate symporter family JI729_RS07955 PF00206 Lyase JI729_RS07955 PF10415 Fumarase C C-terminus JI729_RS07960 PF03949 Malic enzyme, NAD binding domain JI729_RS07960 PF00390 Malic enzyme, N-terminal domain JI729_RS07965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS07970 PF08664 YcbB domain JI729_RS07970 PF00072 Response regulator receiver domain JI729_RS07975 PF04434 SWIM zinc finger JI729_RS07975 PF00176 SNF2 family N-terminal domain JI729_RS07975 PF00271 Helicase conserved C-terminal domain JI729_RS07985 PF03590 Aspartate-ammonia ligase JI729_RS07995 PF13840 ACT domain JI729_RS07995 PF00696 Amino acid kinase family JI729_RS08005 PF13761 Domain of unknown function (DUF4166) JI729_RS08010 PF14158 YndJ-like protein JI729_RS08015 PF00293 NUDIX domain JI729_RS08015 PF09297 NADH pyrophosphatase zinc ribbon domain JI729_RS08020 PF07690 Major Facilitator Superfamily JI729_RS08030 PF03976 Polyphosphate kinase 2 (PPK2) JI729_RS08035 PF03551 Transcriptional regulator PadR-like family JI729_RS08035 PF10400 Virulence activator alpha C-term JI729_RS08040 PF07690 Major Facilitator Superfamily JI729_RS08050 PF07690 Major Facilitator Superfamily JI729_RS08055 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JI729_RS08055 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JI729_RS08060 PF13167 GTP-binding GTPase N-terminal JI729_RS08060 PF16360 GTP-binding GTPase Middle Region JI729_RS08060 PF01926 50S ribosome-binding GTPase JI729_RS08065 PF07690 Major Facilitator Superfamily JI729_RS08070 PF00291 Pyridoxal-phosphate dependent enzyme JI729_RS08090 PF00209 Sodium:neurotransmitter symporter family JI729_RS08095 PF00457 Glycosyl hydrolases family 11 JI729_RS08095 PF01522 Polysaccharide deacetylase JI729_RS08095 PF03422 Carbohydrate binding module (family 6) JI729_RS08105 PF04239 Protein of unknown function (DUF421) JI729_RS08125 PF01625 Peptide methionine sulfoxide reductase JI729_RS08135 PF01063 Amino-transferase class IV JI729_RS08140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JI729_RS08140 PF00205 Thiamine pyrophosphate enzyme, central domain JI729_RS08140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JI729_RS08150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JI729_RS08150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JI729_RS08155 PF00920 Dehydratase family JI729_RS08160 PF00291 Pyridoxal-phosphate dependent enzyme JI729_RS08160 PF00585 C-terminal regulatory domain of Threonine dehydratase JI729_RS08170 PF09587 Bacterial capsule synthesis protein PGA_cap JI729_RS08185 PF07690 Major Facilitator Superfamily JI729_RS08190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JI729_RS08200 PF04397 LytTr DNA-binding domain JI729_RS08200 PF00072 Response regulator receiver domain JI729_RS08205 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JI729_RS08205 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JI729_RS08210 PF13673 Acetyltransferase (GNAT) domain JI729_RS08220 PF01979 Amidohydrolase family JI729_RS08225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JI729_RS08230 PF13302 Acetyltransferase (GNAT) domain JI729_RS08235 PF00486 Transcriptional regulatory protein, C terminal JI729_RS08235 PF00072 Response regulator receiver domain JI729_RS08240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS08240 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS08250 PF01566 Natural resistance-associated macrophage protein JI729_RS08255 PF12368 Rhodanase C-terminal JI729_RS08255 PF17773 UPF0176 acylphosphatase like domain JI729_RS08255 PF00581 Rhodanese-like domain JI729_RS08265 PF08546 Ketopantoate reductase PanE/ApbA C terminal JI729_RS08265 PF02558 Ketopantoate reductase PanE/ApbA JI729_RS08270 PF13520 Amino acid permease JI729_RS08280 PF05791 Bacillus haemolytic enterotoxin (HBL) JI729_RS08285 PF05791 Bacillus haemolytic enterotoxin (HBL) JI729_RS08295 PF01906 Putative heavy-metal-binding JI729_RS08305 PF00440 Bacterial regulatory proteins, tetR family JI729_RS08310 PF04198 Putative sugar-binding domain JI729_RS08315 PF01791 DeoC/LacD family aldolase JI729_RS08320 PF07662 Na+ dependent nucleoside transporter C-terminus JI729_RS08320 PF01773 Na+ dependent nucleoside transporter N-terminus JI729_RS08325 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JI729_RS08325 PF02885 Glycosyl transferase family, helical bundle domain JI729_RS08325 PF00591 Glycosyl transferase family, a/b domain JI729_RS08330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JI729_RS08340 PF07301 Protein of unknown function (DUF1453) JI729_RS08345 PF05979 Bacterial protein of unknown function (DUF896) JI729_RS08350 PF00557 Metallopeptidase family M24 JI729_RS08350 PF05195 Aminopeptidase P, N-terminal domain JI729_RS08360 PF07732 Multicopper oxidase JI729_RS08360 PF07731 Multicopper oxidase JI729_RS08360 PF00394 Multicopper oxidase JI729_RS08370 PF01396 Topoisomerase DNA binding C4 zinc finger JI729_RS08370 PF13342 C-terminal repeat of topoisomerase JI729_RS08370 PF01751 Toprim domain JI729_RS08370 PF01131 DNA topoisomerase JI729_RS08385 PF02525 Flavodoxin-like fold JI729_RS08390 PF05525 Branched-chain amino acid transport protein JI729_RS08395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS08400 PF13115 YtkA-like JI729_RS08400 PF05425 Copper resistance protein D JI729_RS08400 PF04234 CopC domain JI729_RS08405 PF07987 Domain of unkown function (DUF1775) JI729_RS08410 PF00892 EamA-like transporter family JI729_RS08415 PF03466 LysR substrate binding domain JI729_RS08415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS08420 PF02082 Transcriptional regulator JI729_RS08425 PF01323 DSBA-like thioredoxin domain JI729_RS08430 PF00881 Nitroreductase family JI729_RS08435 PF01425 Amidase JI729_RS08440 PF01594 AI-2E family transporter JI729_RS08445 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JI729_RS08445 PF00056 lactate/malate dehydrogenase, NAD binding domain JI729_RS08450 PF01593 Flavin containing amine oxidoreductase JI729_RS08455 PF07683 Cobalamin synthesis protein cobW C-terminal domain JI729_RS08455 PF02492 CobW/HypB/UreG, nucleotide-binding domain JI729_RS08465 PF00005 ABC transporter JI729_RS08465 PF12399 Branched-chain amino acid ATP-binding cassette transporter JI729_RS08470 PF00005 ABC transporter JI729_RS08475 PF02653 Branched-chain amino acid transport system / permease component JI729_RS08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS08485 PF03466 LysR substrate binding domain JI729_RS08495 PF14552 Tautomerase enzyme JI729_RS08505 PF01047 MarR family JI729_RS08515 PF01654 Cytochrome bd terminal oxidase subunit I JI729_RS08520 PF02322 Cytochrome bd terminal oxidase subunit II JI729_RS08525 PF00005 ABC transporter JI729_RS08525 PF00664 ABC transporter transmembrane region JI729_RS08530 PF00664 ABC transporter transmembrane region JI729_RS08530 PF00005 ABC transporter JI729_RS08540 PF00535 Glycosyl transferase family 2 JI729_RS08545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JI729_RS08550 PF00132 Bacterial transferase hexapeptide (six repeats) JI729_RS08575 PF02016 LD-carboxypeptidase N-terminal domain JI729_RS08575 PF17676 LD-carboxypeptidase C-terminal domain JI729_RS08580 PF07943 Penicillin-binding protein 5, C-terminal domain JI729_RS08580 PF00768 D-alanyl-D-alanine carboxypeptidase JI729_RS08595 PF01476 LysM domain JI729_RS08595 PF00877 NlpC/P60 family JI729_RS08605 PF00664 ABC transporter transmembrane region JI729_RS08605 PF00005 ABC transporter JI729_RS08610 PF00486 Transcriptional regulatory protein, C terminal JI729_RS08610 PF00072 Response regulator receiver domain JI729_RS08615 PF16736 Single Cache-like JI729_RS08615 PF00989 PAS fold JI729_RS08615 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS08615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS08620 PF00106 short chain dehydrogenase JI729_RS08625 PF04439 Streptomycin adenylyltransferase JI729_RS08630 PF01522 Polysaccharide deacetylase JI729_RS08650 PF03447 Homoserine dehydrogenase, NAD binding domain JI729_RS08650 PF00742 Homoserine dehydrogenase JI729_RS08650 PF01842 ACT domain JI729_RS08655 PF00291 Pyridoxal-phosphate dependent enzyme JI729_RS08660 PF08544 GHMP kinases C terminal JI729_RS08660 PF00288 GHMP kinases N terminal domain JI729_RS08675 PF03816 Cell envelope-related transcriptional attenuator domain JI729_RS08685 PF00486 Transcriptional regulatory protein, C terminal JI729_RS08685 PF00072 Response regulator receiver domain JI729_RS08690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS08690 PF00989 PAS fold JI729_RS08690 PF16736 Single Cache-like JI729_RS08690 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS08695 PF01522 Polysaccharide deacetylase JI729_RS08705 PF02308 MgtC family JI729_RS08710 PF00583 Acetyltransferase (GNAT) family JI729_RS08715 PF06276 Ferric iron reductase FhuF-like transporter JI729_RS08715 PF04183 IucA / IucC family JI729_RS08720 PF06276 Ferric iron reductase FhuF-like transporter JI729_RS08720 PF04183 IucA / IucC family JI729_RS08725 PF13193 AMP-binding enzyme C-terminal domain JI729_RS08725 PF00501 AMP-binding enzyme JI729_RS08740 PF01261 Xylose isomerase-like TIM barrel JI729_RS08745 PF00269 Small, acid-soluble spore proteins, alpha/beta type JI729_RS08750 PF07690 Major Facilitator Superfamily JI729_RS08755 PF01810 LysE type translocator JI729_RS08760 PF00392 Bacterial regulatory proteins, gntR family JI729_RS08760 PF00155 Aminotransferase class I and II JI729_RS08770 PF01734 Patatin-like phospholipase JI729_RS08795 PF00293 NUDIX domain JI729_RS08795 PF13344 Haloacid dehalogenase-like hydrolase JI729_RS08800 PF02540 NAD synthase JI729_RS08805 PF02687 FtsX-like permease family JI729_RS08810 PF18277 AbrB C-terminal domain JI729_RS08810 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JI729_RS08815 PF00082 Subtilase family JI729_RS08825 PF05656 Protein of unknown function (DUF805) JI729_RS08845 PF03193 RsgA GTPase JI729_RS08850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS08850 PF00672 HAMP domain JI729_RS08850 PF02743 Cache domain JI729_RS08870 PF00210 Ferritin-like domain JI729_RS08885 PF00296 Luciferase-like monooxygenase JI729_RS08895 PF01593 Flavin containing amine oxidoreductase JI729_RS08900 PF13302 Acetyltransferase (GNAT) domain JI729_RS08905 PF00248 Aldo/keto reductase family JI729_RS08910 PF07683 Cobalamin synthesis protein cobW C-terminal domain JI729_RS08910 PF02492 CobW/HypB/UreG, nucleotide-binding domain JI729_RS08915 PF00583 Acetyltransferase (GNAT) family JI729_RS08920 PF01297 Zinc-uptake complex component A periplasmic JI729_RS08930 PF13460 NAD(P)H-binding JI729_RS08935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JI729_RS08940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JI729_RS08940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JI729_RS08950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JI729_RS08955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS08965 PF00300 Histidine phosphatase superfamily (branch 1) JI729_RS08975 PF08757 CotH kinase protein JI729_RS08980 PF00293 NUDIX domain JI729_RS08985 PF09335 SNARE associated Golgi protein JI729_RS08990 PF01943 Polysaccharide biosynthesis protein JI729_RS08990 PF14667 Polysaccharide biosynthesis C-terminal domain JI729_RS09000 PF03773 Predicted permease JI729_RS09005 PF09323 Domain of unknown function (DUF1980) JI729_RS09010 PF03061 Thioesterase superfamily JI729_RS09020 PF13091 PLD-like domain JI729_RS09020 PF13396 Phospholipase_D-nuclease N-terminal JI729_RS09035 PF13460 NAD(P)H-binding JI729_RS09040 PF04306 Protein of unknown function (DUF456) JI729_RS09045 PF00571 CBS domain JI729_RS09045 PF03471 Transporter associated domain JI729_RS09045 PF01595 Cyclin M transmembrane N-terminal domain JI729_RS09060 PF05525 Branched-chain amino acid transport protein JI729_RS09065 PF01588 Putative tRNA binding domain JI729_RS09085 PF07454 Stage II sporulation protein P (SpoIIP) JI729_RS09095 PF02557 D-alanyl-D-alanine carboxypeptidase JI729_RS09105 PF07690 Major Facilitator Superfamily JI729_RS09115 PF01145 SPFH domain / Band 7 family JI729_RS09120 PF07454 Stage II sporulation protein P (SpoIIP) JI729_RS09125 PF00300 Histidine phosphatase superfamily (branch 1) JI729_RS09145 PF01168 Alanine racemase, N-terminal domain JI729_RS09145 PF00842 Alanine racemase, C-terminal domain JI729_RS09160 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JI729_RS09165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JI729_RS09165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JI729_RS09170 PF00155 Aminotransferase class I and II JI729_RS09170 PF00392 Bacterial regulatory proteins, gntR family JI729_RS09200 PF00583 Acetyltransferase (GNAT) family JI729_RS09215 PF06013 Proteins of 100 residues with WXG JI729_RS09230 PF08817 WXG100 protein secretion system (Wss), protein YukD JI729_RS09235 PF10140 WXG100 protein secretion system (Wss), protein YukC JI729_RS09240 PF12538 DNA transporter JI729_RS09240 PF01580 FtsK/SpoIIIE family JI729_RS09340 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JI729_RS09365 PF01209 ubiE/COQ5 methyltransferase family JI729_RS09370 PF01268 Formate--tetrahydrofolate ligase JI729_RS09380 PF00271 Helicase conserved C-terminal domain JI729_RS09380 PF00270 DEAD/DEAH box helicase JI729_RS09385 PF01261 Xylose isomerase-like TIM barrel JI729_RS09390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS09400 PF00107 Zinc-binding dehydrogenase JI729_RS09400 PF08240 Alcohol dehydrogenase GroES-like domain JI729_RS09405 PF04542 Sigma-70 region 2 JI729_RS09405 PF08281 Sigma-70, region 4 JI729_RS09430 PF00255 Glutathione peroxidase JI729_RS09435 PF11992 Domain of unknown function (DUF3488) JI729_RS09435 PF01841 Transglutaminase-like superfamily JI729_RS09435 PF13559 Domain of unknown function (DUF4129) JI729_RS09440 PF01882 Protein of unknown function DUF58 JI729_RS09445 PF07726 ATPase family associated with various cellular activities (AAA) JI729_RS09445 PF17863 AAA lid domain JI729_RS09460 PF01568 Molydopterin dinucleotide binding domain JI729_RS09460 PF00384 Molybdopterin oxidoreductase JI729_RS09460 PF14710 Respiratory nitrate reductase alpha N-terminal JI729_RS09465 PF14711 Respiratory nitrate reductase beta C-terminal JI729_RS09465 PF13247 4Fe-4S dicluster domain JI729_RS09470 PF02613 Nitrate reductase delta subunit JI729_RS09475 PF02665 Nitrate reductase gamma subunit JI729_RS09480 PF00325 Bacterial regulatory proteins, crp family JI729_RS09480 PF00027 Cyclic nucleotide-binding domain JI729_RS09485 PF04055 Radical SAM superfamily JI729_RS09485 PF06463 Molybdenum Cofactor Synthesis C JI729_RS09490 PF00899 ThiF family JI729_RS09495 PF00994 Probable molybdopterin binding domain JI729_RS09495 PF03454 MoeA C-terminal region (domain IV) JI729_RS09495 PF03453 MoeA N-terminal region (domain I and II) JI729_RS09500 PF02391 MoaE protein JI729_RS09505 PF02597 ThiS family JI729_RS09510 PF07690 Major Facilitator Superfamily JI729_RS09535 PF01903 CbiX JI729_RS09540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JI729_RS09545 PF00355 Rieske [2Fe-2S] domain JI729_RS09550 PF18267 Rubredoxin NAD+ reductase C-terminal domain JI729_RS09550 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS09550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JI729_RS09550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JI729_RS09550 PF04324 BFD-like [2Fe-2S] binding domain JI729_RS09555 PF04405 Domain of Unknown function (DUF542) JI729_RS09555 PF01814 Hemerythrin HHE cation binding domain JI729_RS09590 PF04232 Stage V sporulation protein S (SpoVS) JI729_RS09595 PF14659 Phage integrase, N-terminal SAM-like domain JI729_RS09595 PF00589 Phage integrase family JI729_RS09600 PF06114 IrrE N-terminal-like domain JI729_RS09605 PF01381 Helix-turn-helix JI729_RS09685 PF00589 Phage integrase family JI729_RS09690 PF03992 Antibiotic biosynthesis monooxygenase JI729_RS09700 PF11553 Protein of unknown function (DUF3231) JI729_RS09710 PF00589 Phage integrase family JI729_RS09720 PF10668 Phage terminase small subunit JI729_RS09725 PF04466 Phage terminase large subunit JI729_RS09725 PF17288 Terminase RNAseH like domain JI729_RS09745 PF14550 Putative phage serine protease XkdF JI729_RS09865 PF13457 GW (Gly-Tryp) dipeptide domain JI729_RS09865 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JI729_RS09875 PF00082 Subtilase family JI729_RS09885 PF18801 response regulator aspartate phosphatase H, N terminal JI729_RS09900 PF01966 HD domain JI729_RS09905 PF00005 ABC transporter JI729_RS09905 PF16326 ABC transporter C-terminal domain JI729_RS09905 PF12848 ABC transporter JI729_RS09920 PF00436 Single-strand binding protein family JI729_RS09930 PF08712 Scaffold protein Nfu/NifU N terminal JI729_RS09930 PF13769 Virulence factor JI729_RS09940 PF06491 Disulphide isomerase JI729_RS09945 PF04445 Putative SAM-dependent methyltransferase JI729_RS09950 PF00750 tRNA synthetases class I (R) JI729_RS09950 PF03485 Arginyl tRNA synthetase N terminal domain JI729_RS09950 PF05746 DALR anticodon binding domain JI729_RS09975 PF00133 tRNA synthetases class I (I, L, M and V) JI729_RS09975 PF08264 Anticodon-binding domain of tRNA JI729_RS09990 PF00152 tRNA synthetases class II (D, K and N) JI729_RS09990 PF01336 OB-fold nucleic acid binding domain JI729_RS09995 PF00209 Sodium:neurotransmitter symporter family JI729_RS10010 PF10997 Alternate to MurJ JI729_RS10015 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS10025 PF00465 Iron-containing alcohol dehydrogenase JI729_RS10030 PF01177 Asp/Glu/Hydantoin racemase JI729_RS10035 PF01980 tRNA-methyltransferase O JI729_RS10040 PF00583 Acetyltransferase (GNAT) family JI729_RS10045 PF11188 Protein of unknown function (DUF2975) JI729_RS10050 PF13443 Cro/C1-type HTH DNA-binding domain JI729_RS10055 PF08645 Polynucleotide kinase 3 phosphatase JI729_RS10065 PF00005 ABC transporter JI729_RS10070 PF05975 Bacterial ABC transporter protein EcsB JI729_RS10075 PF14005 YpjP-like protein JI729_RS10080 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS10095 PF00144 Beta-lactamase JI729_RS10095 PF07930 D-aminopeptidase, domain B JI729_RS10100 PF00303 Thymidylate synthase JI729_RS10105 PF00186 Dihydrofolate reductase JI729_RS10110 PF00905 Penicillin binding protein transpeptidase domain JI729_RS10110 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS10110 PF05223 NTF2-like N-terminal transpeptidase domain JI729_RS10115 PF02525 Flavodoxin-like fold JI729_RS10120 PF01553 Acyltransferase JI729_RS10125 PF03006 Haemolysin-III related JI729_RS10130 PF02416 mttA/Hcf106 family JI729_RS10135 PF00902 Sec-independent protein translocase protein (TatC) JI729_RS10145 PF02645 Uncharacterised protein, DegV family COG1307 JI729_RS10155 PF02630 SCO1/SenC JI729_RS10160 PF00011 Hsp20/alpha crystallin family JI729_RS10165 PF13537 Glutamine amidotransferase domain JI729_RS10165 PF00733 Asparagine synthase JI729_RS10180 PF01520 N-acetylmuramoyl-L-alanine amidase JI729_RS10180 PF05036 Sporulation related domain JI729_RS10185 PF01497 Periplasmic binding protein JI729_RS10190 PF01063 Amino-transferase class IV JI729_RS10195 PF00881 Nitroreductase family JI729_RS10210 PF00857 Isochorismatase family JI729_RS10220 PF00011 Hsp20/alpha crystallin family JI729_RS10225 PF00924 Mechanosensitive ion channel JI729_RS10230 PF13185 GAF domain JI729_RS10230 PF07730 Histidine kinase JI729_RS10235 PF00072 Response regulator receiver domain JI729_RS10235 PF00196 Bacterial regulatory proteins, luxR family JI729_RS10240 PF01418 Helix-turn-helix domain, rpiR family JI729_RS10240 PF01380 SIS domain JI729_RS10245 PF02567 Phenazine biosynthesis-like protein JI729_RS10250 PF08240 Alcohol dehydrogenase GroES-like domain JI729_RS10250 PF00107 Zinc-binding dehydrogenase JI729_RS10265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JI729_RS10265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JI729_RS10270 PF02447 GntP family permease JI729_RS10275 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JI729_RS10275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JI729_RS10295 PF03358 NADPH-dependent FMN reductase JI729_RS10310 PF00005 ABC transporter JI729_RS10310 PF00571 CBS domain JI729_RS10315 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS10320 PF13520 Amino acid permease JI729_RS10350 PF01595 Cyclin M transmembrane N-terminal domain JI729_RS10350 PF03471 Transporter associated domain JI729_RS10350 PF00571 CBS domain JI729_RS10355 PF00171 Aldehyde dehydrogenase family JI729_RS10360 PF07997 Protein of unknown function (DUF1694) JI729_RS10365 PF09385 Histidine kinase N terminal JI729_RS10375 PF00202 Aminotransferase class-III JI729_RS10380 PF01144 Coenzyme A transferase JI729_RS10385 PF01144 Coenzyme A transferase JI729_RS10390 PF01546 Peptidase family M20/M25/M40 JI729_RS10390 PF07687 Peptidase dimerisation domain JI729_RS10395 PF00583 Acetyltransferase (GNAT) family JI729_RS10400 PF00158 Sigma-54 interaction domain JI729_RS10400 PF13426 PAS domain JI729_RS10400 PF02954 Bacterial regulatory protein, Fis family JI729_RS10405 PF12544 Lysine-2,3-aminomutase JI729_RS10410 PF14122 YokU-like protein, putative antitoxin JI729_RS10415 PF06855 YozE SAM-like fold JI729_RS10430 PF14162 YozD-like protein JI729_RS10440 PF08239 Bacterial SH3 domain JI729_RS10440 PF00069 Protein kinase domain JI729_RS10445 PF07070 SpoOM protein JI729_RS10450 PF01569 PAP2 superfamily JI729_RS10455 PF01545 Cation efflux family JI729_RS10455 PF16916 Dimerisation domain of Zinc Transporter JI729_RS10460 PF00085 Thioredoxin JI729_RS10520 PF10676 Spore germination protein gerPA/gerPF JI729_RS10555 PF00905 Penicillin binding protein transpeptidase domain JI729_RS10555 PF00912 Transglycosylase JI729_RS10565 PF07690 Major Facilitator Superfamily JI729_RS10570 PF01521 Iron-sulphur cluster biosynthesis JI729_RS10575 PF00285 Citrate synthase, C-terminal domain JI729_RS10580 PF03972 MmgE/PrpD family JI729_RS10590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JI729_RS10590 PF02770 Acyl-CoA dehydrogenase, middle domain JI729_RS10590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JI729_RS10595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JI729_RS10595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JI729_RS10600 PF00171 Aldehyde dehydrogenase family JI729_RS10605 PF01810 LysE type translocator JI729_RS10610 PF00378 Enoyl-CoA hydratase/isomerase JI729_RS10625 PF00149 Calcineurin-like phosphoesterase JI729_RS10625 PF12320 Type 5 capsule protein repressor C-terminal domain JI729_RS10630 PF13476 AAA domain JI729_RS10635 PF14659 Phage integrase, N-terminal SAM-like domain JI729_RS10635 PF00589 Phage integrase family JI729_RS10665 PF01695 IstB-like ATP binding protein JI729_RS10665 PF07319 Primosomal protein DnaI N-terminus JI729_RS10730 PF01612 3'-5' exonuclease JI729_RS10730 PF00476 DNA polymerase family A JI729_RS10730 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JI729_RS10730 PF01367 5'-3' exonuclease, C-terminal SAM fold JI729_RS10740 PF00269 Small, acid-soluble spore proteins, alpha/beta type JI729_RS10750 PF02075 Crossover junction endodeoxyribonuclease RuvC JI729_RS10770 PF02511 Thymidylate synthase complementing protein JI729_RS10795 PF00145 C-5 cytosine-specific DNA methylase JI729_RS10800 PF00145 C-5 cytosine-specific DNA methylase JI729_RS10840 PF00589 Phage integrase family JI729_RS10935 PF01510 N-acetylmuramoyl-L-alanine amidase JI729_RS10935 PF13457 GW (Gly-Tryp) dipeptide domain JI729_RS10990 PF01022 Bacterial regulatory protein, arsR family JI729_RS11000 PF07690 Major Facilitator Superfamily JI729_RS11005 PF00106 short chain dehydrogenase JI729_RS11010 PF00425 chorismate binding enzyme JI729_RS11015 PF00501 AMP-binding enzyme JI729_RS11015 PF13193 AMP-binding enzyme C-terminal domain JI729_RS11020 PF00550 Phosphopantetheine attachment site JI729_RS11020 PF00857 Isochorismatase family JI729_RS11025 PF00550 Phosphopantetheine attachment site JI729_RS11025 PF00668 Condensation domain JI729_RS11025 PF13193 AMP-binding enzyme C-terminal domain JI729_RS11025 PF00501 AMP-binding enzyme JI729_RS11025 PF00975 Thioesterase domain JI729_RS11030 PF03621 MbtH-like protein JI729_RS11035 PF07690 Major Facilitator Superfamily JI729_RS11050 PF00216 Bacterial DNA-binding protein JI729_RS11060 PF05163 DinB family JI729_RS11065 PF00082 Subtilase family JI729_RS11070 PF01235 Sodium:alanine symporter family JI729_RS11090 PF00849 RNA pseudouridylate synthase JI729_RS11090 PF01479 S4 domain JI729_RS11095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JI729_RS11095 PF02824 TGS domain JI729_RS11095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JI729_RS11095 PF03129 Anticodon binding domain JI729_RS11100 PF00005 ABC transporter JI729_RS11115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JI729_RS11115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JI729_RS11115 PF00205 Thiamine pyrophosphate enzyme, central domain JI729_RS11155 PF00027 Cyclic nucleotide-binding domain JI729_RS11165 PF00561 alpha/beta hydrolase fold JI729_RS11175 PF16123 Hydroxyacylglutathione hydrolase C-terminus JI729_RS11175 PF00753 Metallo-beta-lactamase superfamily JI729_RS11185 PF03176 MMPL family JI729_RS11195 PF00302 Chloramphenicol acetyltransferase JI729_RS11210 PF00583 Acetyltransferase (GNAT) family JI729_RS11235 PF01593 Flavin containing amine oxidoreductase JI729_RS11245 PF13302 Acetyltransferase (GNAT) domain JI729_RS11255 PF00313 'Cold-shock' DNA-binding domain JI729_RS11275 PF03466 LysR substrate binding domain JI729_RS11275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS11280 PF02774 Semialdehyde dehydrogenase, dimerisation domain JI729_RS11280 PF01118 Semialdehyde dehydrogenase, NAD binding domain JI729_RS11295 PF03466 LysR substrate binding domain JI729_RS11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS11300 PF03473 MOSC domain JI729_RS11300 PF03475 3-alpha domain JI729_RS11315 PF00664 ABC transporter transmembrane region JI729_RS11315 PF00005 ABC transporter JI729_RS11320 PF00664 ABC transporter transmembrane region JI729_RS11320 PF00005 ABC transporter JI729_RS11370 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS11370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JI729_RS11375 PF08281 Sigma-70, region 4 JI729_RS11375 PF04542 Sigma-70 region 2 JI729_RS11375 PF12680 SnoaL-like domain JI729_RS11405 PF02638 Glycosyl hydrolase-like 10 JI729_RS11415 PF02378 Phosphotransferase system, EIIC JI729_RS11425 PF03702 Anhydro-N-acetylmuramic acid kinase JI729_RS11430 PF01869 BadF/BadG/BcrA/BcrD ATPase family JI729_RS11435 PF02660 Glycerol-3-phosphate acyltransferase JI729_RS11440 PF00266 Aminotransferase class-V JI729_RS11445 PF00291 Pyridoxal-phosphate dependent enzyme JI729_RS11450 PF01047 MarR family JI729_RS11455 PF07690 Major Facilitator Superfamily JI729_RS11465 PF00753 Metallo-beta-lactamase superfamily JI729_RS11465 PF16123 Hydroxyacylglutathione hydrolase C-terminus JI729_RS11475 PF00270 DEAD/DEAH box helicase JI729_RS11475 PF00271 Helicase conserved C-terminal domain JI729_RS11485 PF17932 Tetracyclin repressor-like, C-terminal domain JI729_RS11485 PF00440 Bacterial regulatory proteins, tetR family JI729_RS11500 PF03848 Tellurite resistance protein TehB JI729_RS11500 PF09313 Domain of unknown function (DUF1971) JI729_RS11510 PF08241 Methyltransferase domain JI729_RS11515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JI729_RS11515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JI729_RS11515 PF00205 Thiamine pyrophosphate enzyme, central domain JI729_RS11520 PF01047 MarR family JI729_RS11525 PF00300 Histidine phosphatase superfamily (branch 1) JI729_RS11530 PF14171 Toxin SpoIISA, type II toxin-antitoxin system JI729_RS11550 PF01546 Peptidase family M20/M25/M40 JI729_RS11550 PF07687 Peptidase dimerisation domain JI729_RS11565 PF00072 Response regulator receiver domain JI729_RS11565 PF00196 Bacterial regulatory proteins, luxR family JI729_RS11575 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JI729_RS11575 PF18277 AbrB C-terminal domain JI729_RS11585 PF01925 Sulfite exporter TauE/SafE JI729_RS11590 PF00132 Bacterial transferase hexapeptide (six repeats) JI729_RS11595 PF00768 D-alanyl-D-alanine carboxypeptidase JI729_RS11595 PF07943 Penicillin-binding protein 5, C-terminal domain JI729_RS11610 PF07690 Major Facilitator Superfamily JI729_RS11615 PF00550 Phosphopantetheine attachment site JI729_RS11615 PF00501 AMP-binding enzyme JI729_RS11615 PF00668 Condensation domain JI729_RS11615 PF13193 AMP-binding enzyme C-terminal domain JI729_RS11620 PF13193 AMP-binding enzyme C-terminal domain JI729_RS11620 PF00668 Condensation domain JI729_RS11620 PF07993 Male sterility protein JI729_RS11620 PF00550 Phosphopantetheine attachment site JI729_RS11620 PF00501 AMP-binding enzyme JI729_RS11625 PF00501 AMP-binding enzyme JI729_RS11625 PF13193 AMP-binding enzyme C-terminal domain JI729_RS11625 PF00550 Phosphopantetheine attachment site JI729_RS11625 PF00668 Condensation domain JI729_RS11630 PF01648 4'-phosphopantetheinyl transferase superfamily JI729_RS11635 PF00975 Thioesterase domain JI729_RS11660 PF13302 Acetyltransferase (GNAT) domain JI729_RS11670 PF00395 S-layer homology domain JI729_RS11670 PF01520 N-acetylmuramoyl-L-alanine amidase JI729_RS11690 PF00027 Cyclic nucleotide-binding domain JI729_RS11690 PF01734 Patatin-like phospholipase JI729_RS11700 PF01842 ACT domain JI729_RS11700 PF03315 Serine dehydratase beta chain JI729_RS11705 PF03313 Serine dehydratase alpha chain JI729_RS11740 PF00282 Pyridoxal-dependent decarboxylase conserved domain JI729_RS11750 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JI729_RS11775 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS11775 PF00905 Penicillin binding protein transpeptidase domain JI729_RS11775 PF05223 NTF2-like N-terminal transpeptidase domain JI729_RS11780 PF08281 Sigma-70, region 4 JI729_RS11780 PF04542 Sigma-70 region 2 JI729_RS11790 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS11790 PF00905 Penicillin binding protein transpeptidase domain JI729_RS11795 PF00905 Penicillin binding protein transpeptidase domain JI729_RS11795 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS11805 PF00149 Calcineurin-like phosphoesterase JI729_RS11815 PF00005 ABC transporter JI729_RS11825 PF08359 YsiA-like protein, C-terminal region JI729_RS11825 PF00440 Bacterial regulatory proteins, tetR family JI729_RS11840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JI729_RS11840 PF02770 Acyl-CoA dehydrogenase, middle domain JI729_RS11840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JI729_RS11845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JI729_RS11845 PF00289 Biotin carboxylase, N-terminal domain JI729_RS11845 PF02785 Biotin carboxylase C-terminal domain JI729_RS11850 PF00364 Biotin-requiring enzyme JI729_RS11855 PF00682 HMGL-like JI729_RS11860 PF00378 Enoyl-CoA hydratase/isomerase JI729_RS11865 PF01039 Carboxyl transferase domain JI729_RS11870 PF00501 AMP-binding enzyme JI729_RS11870 PF16177 Acetyl-coenzyme A synthetase N-terminus JI729_RS11870 PF13193 AMP-binding enzyme C-terminal domain JI729_RS11905 PF00768 D-alanyl-D-alanine carboxypeptidase JI729_RS11905 PF07943 Penicillin-binding protein 5, C-terminal domain JI729_RS11910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS11910 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS11915 PF00072 Response regulator receiver domain JI729_RS11915 PF00486 Transcriptional regulatory protein, C terminal JI729_RS11920 PF01966 HD domain JI729_RS11930 PF01048 Phosphorylase superfamily JI729_RS11945 PF03413 Peptidase propeptide and YPEB domain JI729_RS11945 PF01447 Thermolysin metallopeptidase, catalytic domain JI729_RS11945 PF02868 Thermolysin metallopeptidase, alpha-helical domain JI729_RS11945 PF07504 Fungalysin/Thermolysin Propeptide Motif JI729_RS11960 PF09278 MerR, DNA binding JI729_RS11960 PF00376 MerR family regulatory protein JI729_RS11965 PF07690 Major Facilitator Superfamily JI729_RS11975 PF01638 HxlR-like helix-turn-helix JI729_RS11980 PF13847 Methyltransferase domain JI729_RS12015 PF00155 Aminotransferase class I and II JI729_RS12015 PF00392 Bacterial regulatory proteins, gntR family JI729_RS12020 PF02796 Helix-turn-helix domain of resolvase JI729_RS12020 PF00239 Resolvase, N terminal domain JI729_RS12030 PF01965 DJ-1/PfpI family JI729_RS12045 PF04239 Protein of unknown function (DUF421) JI729_RS12060 PF08450 SMP-30/Gluconolactonase/LRE-like region JI729_RS12075 PF07486 Cell Wall Hydrolase JI729_RS12085 PF00072 Response regulator receiver domain JI729_RS12085 PF00486 Transcriptional regulatory protein, C terminal JI729_RS12090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS12095 PF12848 ABC transporter JI729_RS12095 PF00005 ABC transporter JI729_RS12105 PF00005 ABC transporter JI729_RS12110 PF02687 FtsX-like permease family JI729_RS12130 PF03447 Homoserine dehydrogenase, NAD binding domain JI729_RS12130 PF01842 ACT domain JI729_RS12130 PF00742 Homoserine dehydrogenase JI729_RS12135 PF00392 Bacterial regulatory proteins, gntR family JI729_RS12135 PF00155 Aminotransferase class I and II JI729_RS12140 PF01820 D-ala D-ala ligase N-terminus JI729_RS12140 PF07478 D-ala D-ala ligase C-terminus JI729_RS12145 PF03070 TENA/THI-4/PQQC family JI729_RS12170 PF14659 Phage integrase, N-terminal SAM-like domain JI729_RS12170 PF00589 Phage integrase family JI729_RS12190 PF01381 Helix-turn-helix JI729_RS12215 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JI729_RS12215 PF18277 AbrB C-terminal domain JI729_RS12295 PF00589 Phage integrase family JI729_RS12345 PF00574 Clp protease JI729_RS12415 PF04688 SPP1 phage holin JI729_RS12420 PF01510 N-acetylmuramoyl-L-alanine amidase JI729_RS12420 PF12123 N-acetylmuramoyl-l-alanine amidase JI729_RS12465 PF00067 Cytochrome P450 JI729_RS12475 PF00132 Bacterial transferase hexapeptide (six repeats) JI729_RS12480 PF07561 Domain of Unknown Function (DUF1540) JI729_RS12490 PF00067 Cytochrome P450 JI729_RS12505 PF13426 PAS domain JI729_RS12505 PF13188 PAS domain JI729_RS12505 PF00989 PAS fold JI729_RS12505 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS12505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS12510 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS12510 PF00905 Penicillin binding protein transpeptidase domain JI729_RS12515 PF10502 Signal peptidase, peptidase S26 JI729_RS12520 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JI729_RS12525 PF01177 Asp/Glu/Hydantoin racemase JI729_RS12530 PF07155 ECF-type riboflavin transporter, S component JI729_RS12535 PF00005 ABC transporter JI729_RS12535 PF12558 ATP-binding cassette cobalt transporter JI729_RS12550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS12550 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS12595 PF04229 GrpB protein JI729_RS12600 PF00107 Zinc-binding dehydrogenase JI729_RS12600 PF08240 Alcohol dehydrogenase GroES-like domain JI729_RS12605 PF01569 PAP2 superfamily JI729_RS12610 PF03793 PASTA domain JI729_RS12610 PF00905 Penicillin binding protein transpeptidase domain JI729_RS12610 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS12615 PF08361 MAATS-type transcriptional repressor, C-terminal region JI729_RS12615 PF00440 Bacterial regulatory proteins, tetR family JI729_RS12665 PF07690 Major Facilitator Superfamily JI729_RS12670 PF07690 Major Facilitator Superfamily JI729_RS12685 PF03009 Glycerophosphoryl diester phosphodiesterase family JI729_RS12705 PF00155 Aminotransferase class I and II JI729_RS12705 PF00392 Bacterial regulatory proteins, gntR family JI729_RS12710 PF00892 EamA-like transporter family JI729_RS12715 PF01270 Glycosyl hydrolases family 8 JI729_RS12720 PF01156 Inosine-uridine preferring nucleoside hydrolase JI729_RS12730 PF01784 NIF3 (NGG1p interacting factor 3) JI729_RS12735 PF00293 NUDIX domain JI729_RS12745 PF00144 Beta-lactamase JI729_RS12755 PF07690 Major Facilitator Superfamily JI729_RS12765 PF09297 NADH pyrophosphatase zinc ribbon domain JI729_RS12765 PF00293 NUDIX domain JI729_RS12770 PF00712 DNA polymerase III beta subunit, N-terminal domain JI729_RS12770 PF02767 DNA polymerase III beta subunit, central domain JI729_RS12770 PF02768 DNA polymerase III beta subunit, C-terminal domain JI729_RS12780 PF12706 Beta-lactamase superfamily domain JI729_RS12790 PF09234 Domain of unknown function (DUF1963) JI729_RS12810 PF01734 Patatin-like phospholipase JI729_RS12815 PF08000 Bacterial PH domain JI729_RS12825 PF12867 DinB superfamily JI729_RS12840 PF02673 Bacitracin resistance protein BacA JI729_RS12850 PF01541 GIY-YIG catalytic domain JI729_RS12890 PF01266 FAD dependent oxidoreductase JI729_RS12920 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS12925 PF00072 Response regulator receiver domain JI729_RS12925 PF00486 Transcriptional regulatory protein, C terminal JI729_RS12930 PF00989 PAS fold JI729_RS12930 PF16736 Single Cache-like JI729_RS12930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS12930 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS12945 PF00005 ABC transporter JI729_RS12950 PF12704 MacB-like periplasmic core domain JI729_RS12950 PF02687 FtsX-like permease family JI729_RS12960 PF07859 alpha/beta hydrolase fold JI729_RS12965 PF00282 Pyridoxal-dependent decarboxylase conserved domain JI729_RS12970 PF00668 Condensation domain JI729_RS12970 PF00501 AMP-binding enzyme JI729_RS12970 PF13193 AMP-binding enzyme C-terminal domain JI729_RS12970 PF00550 Phosphopantetheine attachment site JI729_RS12980 PF03714 Bacterial pullanase-associated domain JI729_RS12980 PF00128 Alpha amylase, catalytic domain JI729_RS12980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JI729_RS12985 PF02868 Thermolysin metallopeptidase, alpha-helical domain JI729_RS12985 PF07504 Fungalysin/Thermolysin Propeptide Motif JI729_RS12985 PF03413 Peptidase propeptide and YPEB domain JI729_RS12985 PF01447 Thermolysin metallopeptidase, catalytic domain JI729_RS12990 PF02872 5'-nucleotidase, C-terminal domain JI729_RS12990 PF00149 Calcineurin-like phosphoesterase JI729_RS13005 PF00344 SecY translocase JI729_RS13010 PF00892 EamA-like transporter family JI729_RS13015 PF00392 Bacterial regulatory proteins, gntR family JI729_RS13015 PF00155 Aminotransferase class I and II JI729_RS13020 PF00561 alpha/beta hydrolase fold JI729_RS13045 PF06081 Aromatic acid exporter family member 1 JI729_RS13045 PF06081 Aromatic acid exporter family member 1 JI729_RS13060 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JI729_RS13065 PF14620 YpeB sporulation JI729_RS13065 PF03413 Peptidase propeptide and YPEB domain JI729_RS13070 PF01471 Putative peptidoglycan binding domain JI729_RS13070 PF07486 Cell Wall Hydrolase JI729_RS13090 PF03301 Tryptophan 2,3-dioxygenase JI729_RS13095 PF04199 Putative cyclase JI729_RS13100 PF00266 Aminotransferase class-V JI729_RS13105 PF00440 Bacterial regulatory proteins, tetR family JI729_RS13105 PF08359 YsiA-like protein, C-terminal region JI729_RS13110 PF13344 Haloacid dehalogenase-like hydrolase JI729_RS13110 PF00293 NUDIX domain JI729_RS13135 PF02954 Bacterial regulatory protein, Fis family JI729_RS13135 PF01590 GAF domain JI729_RS13135 PF00158 Sigma-54 interaction domain JI729_RS13145 PF13302 Acetyltransferase (GNAT) domain JI729_RS13150 PF00455 DeoR C terminal sensor domain JI729_RS13150 PF08220 DeoR-like helix-turn-helix domain JI729_RS13165 PF02082 Transcriptional regulator JI729_RS13185 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS13185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JI729_RS13190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JI729_RS13190 PF02817 e3 binding domain JI729_RS13190 PF00364 Biotin-requiring enzyme JI729_RS13195 PF02779 Transketolase, pyrimidine binding domain JI729_RS13195 PF02780 Transketolase, C-terminal domain JI729_RS13200 PF00676 Dehydrogenase E1 component JI729_RS13210 PF00106 short chain dehydrogenase JI729_RS13220 PF09297 NADH pyrophosphatase zinc ribbon domain JI729_RS13220 PF00293 NUDIX domain JI729_RS13250 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS13255 PF00005 ABC transporter JI729_RS13255 PF00571 CBS domain JI729_RS13260 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JI729_RS13265 PF00574 Clp protease JI729_RS13280 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JI729_RS13285 PF13673 Acetyltransferase (GNAT) domain JI729_RS13290 PF18416 N-acetylglucosamine binding protein domain 2 JI729_RS13290 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JI729_RS13295 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JI729_RS13300 PF03781 Sulfatase-modifying factor enzyme 1 JI729_RS13305 PF01202 Shikimate kinase JI729_RS13315 PF10990 Protein of unknown function (DUF2809) JI729_RS13320 PF08241 Methyltransferase domain JI729_RS13325 PF04237 YjbR JI729_RS13370 PF00583 Acetyltransferase (GNAT) family JI729_RS13375 PF13538 UvrD-like helicase C-terminal domain JI729_RS13390 PF00270 DEAD/DEAH box helicase JI729_RS13390 PF16124 RecQ zinc-binding JI729_RS13390 PF00271 Helicase conserved C-terminal domain JI729_RS13390 PF09382 RQC domain JI729_RS13390 PF00570 HRDC domain JI729_RS13420 PF12123 N-acetylmuramoyl-l-alanine amidase JI729_RS13420 PF01510 N-acetylmuramoyl-L-alanine amidase JI729_RS13440 PF02833 DHHA2 domain JI729_RS13440 PF01368 DHH family JI729_RS13445 PF18416 N-acetylglucosamine binding protein domain 2 JI729_RS13445 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JI729_RS13460 PF02627 Carboxymuconolactone decarboxylase family JI729_RS13465 PF01235 Sodium:alanine symporter family JI729_RS13470 PF00171 Aldehyde dehydrogenase family JI729_RS13475 PF00701 Dihydrodipicolinate synthetase family JI729_RS13480 PF05544 Proline racemase JI729_RS13485 PF05544 Proline racemase JI729_RS13490 PF01266 FAD dependent oxidoreductase JI729_RS13495 PF02954 Bacterial regulatory protein, Fis family JI729_RS13495 PF13426 PAS domain JI729_RS13495 PF00158 Sigma-54 interaction domain JI729_RS13500 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS13500 PF04324 BFD-like [2Fe-2S] binding domain JI729_RS13510 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS13510 PF04324 BFD-like [2Fe-2S] binding domain JI729_RS13525 PF08876 Domain of unknown function (DUF1836) JI729_RS13535 PF01966 HD domain JI729_RS13540 PF09335 SNARE associated Golgi protein JI729_RS13550 PF04914 DltD protein JI729_RS13560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JI729_RS13565 PF00877 NlpC/P60 family JI729_RS13565 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JI729_RS13570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JI729_RS13570 PF13378 Enolase C-terminal domain-like JI729_RS13585 PF00248 Aldo/keto reductase family JI729_RS13590 PF01965 DJ-1/PfpI family JI729_RS13620 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JI729_RS13620 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JI729_RS13630 PF00672 HAMP domain JI729_RS13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS13630 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS13635 PF00072 Response regulator receiver domain JI729_RS13635 PF00486 Transcriptional regulatory protein, C terminal JI729_RS13655 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS13660 PF01048 Phosphorylase superfamily JI729_RS13665 PF03808 Glycosyl transferase WecB/TagA/CpsF family JI729_RS13670 PF08439 Oligopeptidase F JI729_RS13670 PF01432 Peptidase family M3 JI729_RS13675 PF02645 Uncharacterised protein, DegV family COG1307 JI729_RS13680 PF07552 Spore Coat Protein X and V domain JI729_RS13715 PF07690 Major Facilitator Superfamily JI729_RS13725 PF04519 Polymer-forming cytoskeletal JI729_RS13730 PF13171 Protein of unknown function (DUF4004) JI729_RS13735 PF12793 Sugar transport-related sRNA regulator N-term JI729_RS13735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JI729_RS13740 PF07690 Major Facilitator Superfamily JI729_RS13765 PF04226 Transglycosylase associated protein JI729_RS13815 PF00155 Aminotransferase class I and II JI729_RS13820 PF07977 FabA-like domain JI729_RS13825 PF03630 Fumble JI729_RS13845 PF00005 ABC transporter JI729_RS13895 PF01594 AI-2E family transporter JI729_RS13905 PF00296 Luciferase-like monooxygenase JI729_RS13910 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS13915 PF09084 NMT1/THI5 like JI729_RS13920 PF00005 ABC transporter JI729_RS13945 PF02522 Aminoglycoside 3-N-acetyltransferase JI729_RS13965 PF13536 Putative multidrug resistance efflux transporter JI729_RS13970 PF12867 DinB superfamily JI729_RS13990 PF08713 DNA alkylation repair enzyme JI729_RS13995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS14005 PF01522 Polysaccharide deacetylase JI729_RS14010 PF03741 Integral membrane protein TerC family JI729_RS14015 PF00884 Sulfatase JI729_RS14020 PF12848 ABC transporter JI729_RS14020 PF00005 ABC transporter JI729_RS14025 PF03176 MMPL family JI729_RS14030 PF16295 Tetracyclin repressor-like, C-terminal domain JI729_RS14030 PF00440 Bacterial regulatory proteins, tetR family JI729_RS14040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JI729_RS14045 PF01842 ACT domain JI729_RS14045 PF02153 Prephenate dehydrogenase JI729_RS14050 PF00155 Aminotransferase class I and II JI729_RS14055 PF01264 Chorismate synthase JI729_RS14060 PF01817 Chorismate mutase type II JI729_RS14060 PF00793 DAHP synthetase I family JI729_RS14080 PF01636 Phosphotransferase enzyme family JI729_RS14100 PF01476 LysM domain JI729_RS14100 PF06725 3D domain JI729_RS14110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS14120 PF06039 Malate:quinone oxidoreductase (Mqo) JI729_RS14125 PF13407 Periplasmic binding protein domain JI729_RS14130 PF02653 Branched-chain amino acid transport system / permease component JI729_RS14135 PF02653 Branched-chain amino acid transport system / permease component JI729_RS14140 PF00005 ABC transporter JI729_RS14145 PF00325 Bacterial regulatory proteins, crp family JI729_RS14145 PF04198 Putative sugar-binding domain JI729_RS14150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JI729_RS14150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JI729_RS14160 PF01791 DeoC/LacD family aldolase JI729_RS14165 PF03992 Antibiotic biosynthesis monooxygenase JI729_RS14185 PF07662 Na+ dependent nucleoside transporter C-terminus JI729_RS14185 PF01773 Na+ dependent nucleoside transporter N-terminus JI729_RS14190 PF00171 Aldehyde dehydrogenase family JI729_RS14195 PF01472 PUA domain JI729_RS14195 PF00696 Amino acid kinase family JI729_RS14200 PF14748 Pyrroline-5-carboxylate reductase dimerisation JI729_RS14200 PF03807 NADP oxidoreductase coenzyme F420-dependent JI729_RS14205 PF01546 Peptidase family M20/M25/M40 JI729_RS14210 PF01614 Bacterial transcriptional regulator JI729_RS14210 PF09339 IclR helix-turn-helix domain JI729_RS14215 PF00324 Amino acid permease JI729_RS14225 PF00487 Fatty acid desaturase JI729_RS14230 PF05547 Immune inhibitor A peptidase M6 JI729_RS14235 PF04294 VanW like protein JI729_RS14240 PF00245 Alkaline phosphatase JI729_RS14245 PF11188 Protein of unknown function (DUF2975) JI729_RS14250 PF13443 Cro/C1-type HTH DNA-binding domain JI729_RS14275 PF13302 Acetyltransferase (GNAT) domain JI729_RS14280 PF12681 Glyoxalase-like domain JI729_RS14300 PF07726 ATPase family associated with various cellular activities (AAA) JI729_RS14300 PF17863 AAA lid domain JI729_RS14315 PF07690 Major Facilitator Superfamily JI729_RS14325 PF00535 Glycosyl transferase family 2 JI729_RS14335 PF00535 Glycosyl transferase family 2 JI729_RS14340 PF00535 Glycosyl transferase family 2 JI729_RS14350 PF00202 Aminotransferase class-III JI729_RS14355 PF06628 Catalase-related immune-responsive JI729_RS14355 PF00199 Catalase JI729_RS14360 PF04151 Bacterial pre-peptidase C-terminal domain JI729_RS14360 PF08453 Peptidase family M9 N-terminal JI729_RS14360 PF01752 Collagenase JI729_RS14360 PF18496 Collagenase G catalytic helper subdomain JI729_RS14370 PF13382 Adenine deaminase C-terminal domain JI729_RS14370 PF01979 Amidohydrolase family JI729_RS14375 PF00144 Beta-lactamase JI729_RS14395 PF17863 AAA lid domain JI729_RS14395 PF07726 ATPase family associated with various cellular activities (AAA) JI729_RS14460 PF14436 Bacterial EndoU nuclease JI729_RS14460 PF04740 LXG domain of WXG superfamily JI729_RS14480 PF00881 Nitroreductase family JI729_RS14485 PF01047 MarR family JI729_RS14490 PF03764 Elongation factor G, domain IV JI729_RS14490 PF00679 Elongation factor G C-terminus JI729_RS14490 PF00009 Elongation factor Tu GTP binding domain JI729_RS14490 PF14492 Elongation Factor G, domain II JI729_RS14500 PF00293 NUDIX domain JI729_RS14505 PF05406 WGR domain JI729_RS14510 PF16363 GDP-mannose 4,6 dehydratase JI729_RS14520 PF12833 Helix-turn-helix domain JI729_RS14525 PF11734 TilS substrate C-terminal domain JI729_RS14525 PF01171 PP-loop family JI729_RS14525 PF14437 MafB19-like deaminase JI729_RS14535 PF00583 Acetyltransferase (GNAT) family JI729_RS14550 PF00892 EamA-like transporter family JI729_RS14555 PF00392 Bacterial regulatory proteins, gntR family JI729_RS14555 PF00155 Aminotransferase class I and II JI729_RS14560 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JI729_RS14565 PF13031 Protein of unknown function (DUF3892) JI729_RS14570 PF00672 HAMP domain JI729_RS14570 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS14575 PF00072 Response regulator receiver domain JI729_RS14575 PF00486 Transcriptional regulatory protein, C terminal JI729_RS14580 PF00561 alpha/beta hydrolase fold JI729_RS14610 PF01925 Sulfite exporter TauE/SafE JI729_RS14620 PF00324 Amino acid permease JI729_RS14630 PF08713 DNA alkylation repair enzyme JI729_RS14650 PF00293 NUDIX domain JI729_RS14655 PF04989 Cephalosporin hydroxylase JI729_RS14660 PF10502 Signal peptidase, peptidase S26 JI729_RS14665 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS14665 PF00905 Penicillin binding protein transpeptidase domain JI729_RS14675 PF02146 Sir2 family JI729_RS14680 PF01470 Pyroglutamyl peptidase JI729_RS14695 PF03746 LamB/YcsF family JI729_RS14700 PF02626 Carboxyltransferase domain, subdomain A and B JI729_RS14705 PF02682 Carboxyltransferase domain, subdomain C and D JI729_RS14710 PF09339 IclR helix-turn-helix domain JI729_RS14710 PF01614 Bacterial transcriptional regulator JI729_RS14715 PF10502 Signal peptidase, peptidase S26 JI729_RS14720 PF03932 CutC family JI729_RS14735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JI729_RS14735 PF02770 Acyl-CoA dehydrogenase, middle domain JI729_RS14735 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JI729_RS14750 PF07670 Nucleoside recognition JI729_RS14765 PF02915 Rubrerythrin JI729_RS14780 PF00440 Bacterial regulatory proteins, tetR family JI729_RS14785 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JI729_RS14785 PF00391 PEP-utilising enzyme, mobile domain JI729_RS14795 PF00753 Metallo-beta-lactamase superfamily JI729_RS14800 PF10710 Protein of unknown function (DUF2512) JI729_RS14805 PF11553 Protein of unknown function (DUF3231) JI729_RS14810 PF00269 Small, acid-soluble spore proteins, alpha/beta type JI729_RS14815 PF08240 Alcohol dehydrogenase GroES-like domain JI729_RS14815 PF00107 Zinc-binding dehydrogenase JI729_RS14815 PF13823 Alcohol dehydrogenase GroES-associated JI729_RS14825 PF00206 Lyase JI729_RS14825 PF10415 Fumarase C C-terminus JI729_RS14830 PF00710 Asparaginase, N-terminal JI729_RS14830 PF17763 Glutaminase/Asparaginase C-terminal domain JI729_RS14835 PF01381 Helix-turn-helix JI729_RS14855 PF05504 Spore germination B3/ GerAC like, C-terminal JI729_RS14860 PF03845 Spore germination protein JI729_RS14865 PF03323 Bacillus/Clostridium GerA spore germination protein JI729_RS14875 PF00989 PAS fold JI729_RS14875 PF13188 PAS domain JI729_RS14875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS14875 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS14875 PF13426 PAS domain JI729_RS14880 PF05791 Bacillus haemolytic enterotoxin (HBL) JI729_RS14885 PF05791 Bacillus haemolytic enterotoxin (HBL) JI729_RS14900 PF17853 GGDEF-like domain JI729_RS14900 PF12833 Helix-turn-helix domain JI729_RS14910 PF00269 Small, acid-soluble spore proteins, alpha/beta type JI729_RS14915 PF01541 GIY-YIG catalytic domain JI729_RS14915 PF02151 UvrB/uvrC motif JI729_RS14915 PF08459 UvrC Helix-hairpin-helix N-terminal JI729_RS14915 PF12826 Helix-hairpin-helix motif JI729_RS14920 PF13520 Amino acid permease JI729_RS14930 PF13564 DoxX-like family JI729_RS14935 PF03949 Malic enzyme, NAD binding domain JI729_RS14935 PF00390 Malic enzyme, N-terminal domain JI729_RS14950 PF03845 Spore germination protein JI729_RS14955 PF03323 Bacillus/Clostridium GerA spore germination protein JI729_RS14960 PF00072 Response regulator receiver domain JI729_RS14960 PF08664 YcbB domain JI729_RS14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS14970 PF04960 Glutaminase JI729_RS14975 PF01235 Sodium:alanine symporter family JI729_RS14990 PF00144 Beta-lactamase JI729_RS15000 PF02872 5'-nucleotidase, C-terminal domain JI729_RS15000 PF00149 Calcineurin-like phosphoesterase JI729_RS15000 PF17936 Bacterial Ig domain JI729_RS15005 PF00561 alpha/beta hydrolase fold JI729_RS15010 PF00857 Isochorismatase family JI729_RS15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS15020 PF03466 LysR substrate binding domain JI729_RS15025 PF01047 MarR family JI729_RS15030 PF01544 CorA-like Mg2+ transporter protein JI729_RS15050 PF13026 Protein of unknown function (DUF3887) JI729_RS15050 PF12146 Serine aminopeptidase, S33 JI729_RS15065 PF03073 TspO/MBR family JI729_RS15070 PF03441 FAD binding domain of DNA photolyase JI729_RS15070 PF00875 DNA photolyase JI729_RS15080 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JI729_RS15085 PF00361 Proton-conducting membrane transporter JI729_RS15085 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JI729_RS15090 PF10057 Uncharacterized conserved protein (DUF2294) JI729_RS15095 PF01522 Polysaccharide deacetylase JI729_RS15100 PF08239 Bacterial SH3 domain JI729_RS15100 PF01520 N-acetylmuramoyl-L-alanine amidase JI729_RS15105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS15105 PF00989 PAS fold JI729_RS15105 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS15105 PF16736 Single Cache-like JI729_RS15110 PF00072 Response regulator receiver domain JI729_RS15110 PF00486 Transcriptional regulatory protein, C terminal JI729_RS15125 PF10842 Protein of unknown function (DUF2642) JI729_RS15140 PF02559 CarD-like/TRCF domain JI729_RS15155 PF13026 Protein of unknown function (DUF3887) JI729_RS15155 PF12146 Serine aminopeptidase, S33 JI729_RS15165 PF00144 Beta-lactamase JI729_RS15170 PF00144 Beta-lactamase JI729_RS15175 PF00892 EamA-like transporter family JI729_RS15185 PF13091 PLD-like domain JI729_RS15190 PF01040 UbiA prenyltransferase family JI729_RS15210 PF01451 Low molecular weight phosphotyrosine protein phosphatase JI729_RS15215 PF01758 Sodium Bile acid symporter family JI729_RS15220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS15225 PF01022 Bacterial regulatory protein, arsR family JI729_RS15235 PF01872 RibD C-terminal domain JI729_RS15240 PF07993 Male sterility protein JI729_RS15240 PF00550 Phosphopantetheine attachment site JI729_RS15245 PF18665 Tetracyclin repressor-like, C-terminal domain JI729_RS15245 PF00440 Bacterial regulatory proteins, tetR family JI729_RS15260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS15300 PF00667 FAD binding domain JI729_RS15300 PF00258 Flavodoxin JI729_RS15300 PF00067 Cytochrome P450 JI729_RS15300 PF00175 Oxidoreductase NAD-binding domain JI729_RS15305 PF07690 Major Facilitator Superfamily JI729_RS15320 PF00291 Pyridoxal-phosphate dependent enzyme JI729_RS15330 PF01139 tRNA-splicing ligase RtcB JI729_RS15345 PF01510 N-acetylmuramoyl-L-alanine amidase JI729_RS15345 PF12123 N-acetylmuramoyl-l-alanine amidase JI729_RS15485 PF00772 DnaB-like helicase N terminal domain JI729_RS15485 PF03796 DnaB-like helicase C terminal domain JI729_RS15515 PF09669 Phage regulatory protein Rha (Phage_pRha) JI729_RS15515 PF10549 ORF11CD3 domain JI729_RS15575 PF00717 Peptidase S24-like JI729_RS15575 PF01726 LexA DNA binding domain JI729_RS15580 PF02796 Helix-turn-helix domain of resolvase JI729_RS15580 PF00239 Resolvase, N terminal domain JI729_RS15600 PF00005 ABC transporter JI729_RS15605 PF02687 FtsX-like permease family JI729_RS15620 PF00672 HAMP domain JI729_RS15620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS15620 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS15625 PF00072 Response regulator receiver domain JI729_RS15625 PF00486 Transcriptional regulatory protein, C terminal JI729_RS15630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JI729_RS15630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JI729_RS15655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JI729_RS15655 PF01842 ACT domain JI729_RS15655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JI729_RS15660 PF00266 Aminotransferase class-V JI729_RS15695 PF01510 N-acetylmuramoyl-L-alanine amidase JI729_RS15695 PF01476 LysM domain JI729_RS15695 PF01471 Putative peptidoglycan binding domain JI729_RS15945 PF04634 Protein of unknown function, DUF600 JI729_RS16025 PF02557 D-alanyl-D-alanine carboxypeptidase JI729_RS16030 PF09587 Bacterial capsule synthesis protein PGA_cap JI729_RS16035 PF14044 NETI protein JI729_RS16040 PF07690 Major Facilitator Superfamily JI729_RS16050 PF12697 Alpha/beta hydrolase family JI729_RS16055 PF01047 MarR family JI729_RS16060 PF07690 Major Facilitator Superfamily JI729_RS16075 PF02667 Short chain fatty acid transporter JI729_RS16085 PF02525 Flavodoxin-like fold JI729_RS16105 PF14256 YwiC-like protein JI729_RS16115 PF00005 ABC transporter JI729_RS16135 PF03737 Aldolase/RraA JI729_RS16140 PF03606 C4-dicarboxylate anaerobic carrier JI729_RS16145 PF04231 Endonuclease I JI729_RS16160 PF04073 Aminoacyl-tRNA editing domain JI729_RS16165 PF13393 Histidyl-tRNA synthetase JI729_RS16165 PF03129 Anticodon binding domain JI729_RS16180 PF01638 HxlR-like helix-turn-helix JI729_RS16185 PF00881 Nitroreductase family JI729_RS16195 PF02887 Pyruvate kinase, alpha/beta domain JI729_RS16195 PF00224 Pyruvate kinase, barrel domain JI729_RS16195 PF00391 PEP-utilising enzyme, mobile domain JI729_RS16225 PF00005 ABC transporter JI729_RS16250 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS16260 PF13350 Tyrosine phosphatase family JI729_RS16275 PF00293 NUDIX domain JI729_RS16275 PF13344 Haloacid dehalogenase-like hydrolase JI729_RS16280 PF00579 tRNA synthetases class I (W and Y) JI729_RS16285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JI729_RS16285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JI729_RS16285 PF13288 DXP reductoisomerase C-terminal domain JI729_RS16290 PF01594 AI-2E family transporter JI729_RS16330 PF07690 Major Facilitator Superfamily JI729_RS16350 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JI729_RS16360 PF03471 Transporter associated domain JI729_RS16360 PF00571 CBS domain JI729_RS16360 PF01595 Cyclin M transmembrane N-terminal domain JI729_RS16365 PF13411 MerR HTH family regulatory protein JI729_RS16375 PF00483 Nucleotidyl transferase JI729_RS16380 PF16363 GDP-mannose 4,6 dehydratase JI729_RS16385 PF08484 C-methyltransferase C-terminal domain JI729_RS16385 PF08421 Putative zinc binding domain JI729_RS16390 PF01370 NAD dependent epimerase/dehydratase family JI729_RS16405 PF00892 EamA-like transporter family JI729_RS16415 PF00805 Pentapeptide repeats (8 copies) JI729_RS16420 PF06906 Protein of unknown function (DUF1272) JI729_RS16425 PF10282 Lactonase, 7-bladed beta-propeller JI729_RS16430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JI729_RS16430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JI729_RS16435 PF02447 GntP family permease JI729_RS16440 PF00923 Transaldolase/Fructose-6-phosphate aldolase JI729_RS16445 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JI729_RS16445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JI729_RS16450 PF02780 Transketolase, C-terminal domain JI729_RS16450 PF00456 Transketolase, thiamine diphosphate binding domain JI729_RS16450 PF02779 Transketolase, pyrimidine binding domain JI729_RS16455 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JI729_RS16455 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JI729_RS16465 PF14765 Polyketide synthase dehydratase JI729_RS16465 PF00550 Phosphopantetheine attachment site JI729_RS16465 PF00698 Acyl transferase domain JI729_RS16465 PF00107 Zinc-binding dehydrogenase JI729_RS16465 PF08659 KR domain JI729_RS16465 PF02801 Beta-ketoacyl synthase, C-terminal domain JI729_RS16465 PF16197 Ketoacyl-synthetase C-terminal extension JI729_RS16465 PF00109 Beta-ketoacyl synthase, N-terminal domain JI729_RS16465 PF08240 Alcohol dehydrogenase GroES-like domain JI729_RS16470 PF07504 Fungalysin/Thermolysin Propeptide Motif JI729_RS16470 PF03413 Peptidase propeptide and YPEB domain JI729_RS16470 PF01447 Thermolysin metallopeptidase, catalytic domain JI729_RS16470 PF02868 Thermolysin metallopeptidase, alpha-helical domain JI729_RS16480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS16480 PF00672 HAMP domain JI729_RS16480 PF12729 Four helix bundle sensory module for signal transduction JI729_RS16485 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) JI729_RS16490 PF01872 RibD C-terminal domain JI729_RS16490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JI729_RS16495 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JI729_RS16495 PF00925 GTP cyclohydrolase II JI729_RS16500 PF01638 HxlR-like helix-turn-helix JI729_RS16510 PF03928 Haem-degrading JI729_RS16545 PF03960 ArsC family JI729_RS16550 PF07702 UTRA domain JI729_RS16550 PF00392 Bacterial regulatory proteins, gntR family JI729_RS16555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JI729_RS16555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JI729_RS16595 PF02567 Phenazine biosynthesis-like protein JI729_RS16605 PF13302 Acetyltransferase (GNAT) domain JI729_RS16610 PF13193 AMP-binding enzyme C-terminal domain JI729_RS16610 PF00501 AMP-binding enzyme JI729_RS16615 PF02525 Flavodoxin-like fold JI729_RS16620 PF01638 HxlR-like helix-turn-helix JI729_RS16630 PF01022 Bacterial regulatory protein, arsR family JI729_RS16635 PF01522 Polysaccharide deacetylase JI729_RS16640 PF12791 Anti-sigma factor N-terminus JI729_RS16645 PF04542 Sigma-70 region 2 JI729_RS16650 PF00535 Glycosyl transferase family 2 JI729_RS16650 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JI729_RS16670 PF01810 LysE type translocator JI729_RS16690 PF01061 ABC-2 type transporter JI729_RS16695 PF13732 Domain of unknown function (DUF4162) JI729_RS16695 PF00005 ABC transporter JI729_RS16710 PF03063 Prismane/CO dehydrogenase family JI729_RS16715 PF00753 Metallo-beta-lactamase superfamily JI729_RS16720 PF01471 Putative peptidoglycan binding domain JI729_RS16720 PF01183 Glycosyl hydrolases family 25 JI729_RS16730 PF12650 Domain of unknown function (DUF3784) JI729_RS16780 PF00753 Metallo-beta-lactamase superfamily JI729_RS16790 PF00324 Amino acid permease JI729_RS16795 PF07690 Major Facilitator Superfamily JI729_RS16820 PF02585 GlcNAc-PI de-N-acetylase JI729_RS16825 PF08830 Protein of unknown function (DUF1806) JI729_RS16830 PF03600 Citrate transporter JI729_RS16845 PF01497 Periplasmic binding protein JI729_RS16850 PF01032 FecCD transport family JI729_RS16855 PF01032 FecCD transport family JI729_RS16860 PF05675 Protein of unknown function (DUF817) JI729_RS16865 PF13170 Protein of unknown function (DUF4003) JI729_RS16880 PF10901 Protein of unknown function (DUF2690) JI729_RS16890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS16890 PF03466 LysR substrate binding domain JI729_RS16895 PF08240 Alcohol dehydrogenase GroES-like domain JI729_RS16895 PF00107 Zinc-binding dehydrogenase JI729_RS16910 PF01713 Smr domain JI729_RS16910 PF00488 MutS domain V JI729_RS16920 PF09154 Domain of unknown function (DUF1939) JI729_RS16920 PF00128 Alpha amylase, catalytic domain JI729_RS16925 PF00797 N-acetyltransferase JI729_RS16930 PF08439 Oligopeptidase F JI729_RS16930 PF01432 Peptidase family M3 JI729_RS16935 PF04371 Porphyromonas-type peptidyl-arginine deiminase JI729_RS16950 PF06146 Phosphate-starvation-inducible E JI729_RS16955 PF04371 Porphyromonas-type peptidyl-arginine deiminase JI729_RS16960 PF00144 Beta-lactamase JI729_RS16975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS16975 PF03466 LysR substrate binding domain JI729_RS16985 PF03009 Glycerophosphoryl diester phosphodiesterase family JI729_RS16990 PF01494 FAD binding domain JI729_RS16995 PF01022 Bacterial regulatory protein, arsR family JI729_RS17000 PF08240 Alcohol dehydrogenase GroES-like domain JI729_RS17000 PF00107 Zinc-binding dehydrogenase JI729_RS17005 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JI729_RS17010 PF17874 MalT-like TPR region JI729_RS17010 PF18801 response regulator aspartate phosphatase H, N terminal JI729_RS17020 PF04299 Putative FMN-binding domain JI729_RS17025 PF04229 GrpB protein JI729_RS17025 PF13673 Acetyltransferase (GNAT) domain JI729_RS17035 PF01758 Sodium Bile acid symporter family JI729_RS17040 PF01565 FAD binding domain JI729_RS17040 PF02913 FAD linked oxidases, C-terminal domain JI729_RS17065 PF01066 CDP-alcohol phosphatidyltransferase JI729_RS17070 PF00753 Metallo-beta-lactamase superfamily JI729_RS17070 PF00581 Rhodanese-like domain JI729_RS17075 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS17085 PF00483 Nucleotidyl transferase JI729_RS17095 PF01370 NAD dependent epimerase/dehydratase family JI729_RS17100 PF16363 GDP-mannose 4,6 dehydratase JI729_RS17105 PF07282 Putative transposase DNA-binding domain JI729_RS17105 PF01385 Probable transposase JI729_RS17105 PF12323 Helix-turn-helix domain JI729_RS17110 PF18801 response regulator aspartate phosphatase H, N terminal JI729_RS17120 PF00672 HAMP domain JI729_RS17120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS17120 PF02743 Cache domain JI729_RS17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS17145 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS17150 PF00072 Response regulator receiver domain JI729_RS17150 PF00486 Transcriptional regulatory protein, C terminal JI729_RS17155 PF00975 Thioesterase domain JI729_RS17155 PF00668 Condensation domain JI729_RS17155 PF13193 AMP-binding enzyme C-terminal domain JI729_RS17155 PF00501 AMP-binding enzyme JI729_RS17155 PF00550 Phosphopantetheine attachment site JI729_RS17160 PF18563 TubC N-terminal docking domain JI729_RS17160 PF00668 Condensation domain JI729_RS17160 PF13193 AMP-binding enzyme C-terminal domain JI729_RS17160 PF00501 AMP-binding enzyme JI729_RS17160 PF00550 Phosphopantetheine attachment site JI729_RS17165 PF13193 AMP-binding enzyme C-terminal domain JI729_RS17165 PF00668 Condensation domain JI729_RS17165 PF00550 Phosphopantetheine attachment site JI729_RS17165 PF00501 AMP-binding enzyme JI729_RS17170 PF00975 Thioesterase domain JI729_RS17175 PF01648 4'-phosphopantetheinyl transferase superfamily JI729_RS17180 PF07690 Major Facilitator Superfamily JI729_RS17185 PF01569 PAP2 superfamily JI729_RS17195 PF00005 ABC transporter JI729_RS17220 PF03707 Bacterial signalling protein N terminal repeat JI729_RS17220 PF00563 EAL domain JI729_RS17220 PF00990 Diguanylate cyclase, GGDEF domain JI729_RS17225 PF00005 ABC transporter JI729_RS17225 PF16326 ABC transporter C-terminal domain JI729_RS17255 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS17255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS17255 PF00989 PAS fold JI729_RS17260 PF08453 Peptidase family M9 N-terminal JI729_RS17260 PF01752 Collagenase JI729_RS17260 PF18496 Collagenase G catalytic helper subdomain JI729_RS17265 PF02308 MgtC family JI729_RS17275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS17280 PF04294 VanW like protein JI729_RS17290 PF13037 Domain of unknown function (DUF3898) JI729_RS17290 PF13039 Protein of unknown function (DUF3900) JI729_RS17305 PF00313 'Cold-shock' DNA-binding domain JI729_RS17315 PF00258 Flavodoxin JI729_RS17325 PF00293 NUDIX domain JI729_RS17335 PF00132 Bacterial transferase hexapeptide (six repeats) JI729_RS17345 PF00106 short chain dehydrogenase JI729_RS17355 PF00206 Lyase JI729_RS17355 PF14698 Argininosuccinate lyase C-terminal JI729_RS17365 PF01156 Inosine-uridine preferring nucleoside hydrolase JI729_RS17370 PF00474 Sodium:solute symporter family JI729_RS17380 PF00171 Aldehyde dehydrogenase family JI729_RS17395 PF13243 Squalene-hopene cyclase C-terminal domain JI729_RS17395 PF13249 Squalene-hopene cyclase N-terminal domain JI729_RS17400 PF02681 Divergent PAP2 family JI729_RS17405 PF00892 EamA-like transporter family JI729_RS17410 PF06961 Protein of unknown function (DUF1294) JI729_RS17425 PF10609 NUBPL iron-transfer P-loop NTPase JI729_RS17435 PF02391 MoaE protein JI729_RS17440 PF03454 MoeA C-terminal region (domain IV) JI729_RS17440 PF00994 Probable molybdopterin binding domain JI729_RS17440 PF03453 MoeA N-terminal region (domain I and II) JI729_RS17445 PF00899 ThiF family JI729_RS17450 PF01226 Formate/nitrite transporter JI729_RS17455 PF06463 Molybdenum Cofactor Synthesis C JI729_RS17455 PF04055 Radical SAM superfamily JI729_RS17460 PF02634 FdhD/NarQ family JI729_RS17465 PF10057 Uncharacterized conserved protein (DUF2294) JI729_RS17470 PF07849 Protein of unknown function (DUF1641) JI729_RS17475 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JI729_RS17475 PF00037 4Fe-4S binding domain JI729_RS17475 PF01568 Molydopterin dinucleotide binding domain JI729_RS17475 PF00384 Molybdopterin oxidoreductase JI729_RS17475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JI729_RS17480 PF03323 Bacillus/Clostridium GerA spore germination protein JI729_RS17525 PF08241 Methyltransferase domain JI729_RS17530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JI729_RS17535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JI729_RS17540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JI729_RS17545 PF00375 Sodium:dicarboxylate symporter family JI729_RS17550 PF03816 Cell envelope-related transcriptional attenuator domain JI729_RS17560 PF04542 Sigma-70 region 2 JI729_RS17560 PF08281 Sigma-70, region 4 JI729_RS17570 PF13732 Domain of unknown function (DUF4162) JI729_RS17570 PF00005 ABC transporter JI729_RS17580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JI729_RS17580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JI729_RS17585 PF00521 DNA gyrase/topoisomerase IV, subunit A JI729_RS17585 PF03989 DNA gyrase C-terminal domain, beta-propeller JI729_RS17590 PF00986 DNA gyrase B subunit, carboxyl terminus JI729_RS17590 PF01751 Toprim domain JI729_RS17590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS17590 PF00204 DNA gyrase B JI729_RS17595 PF13380 CoA binding domain JI729_RS17600 PF13180 PDZ domain JI729_RS17605 PF00072 Response regulator receiver domain JI729_RS17605 PF00486 Transcriptional regulatory protein, C terminal JI729_RS17610 PF04055 Radical SAM superfamily JI729_RS17615 PF13597 Anaerobic ribonucleoside-triphosphate reductase JI729_RS17615 PF03477 ATP cone domain JI729_RS17620 PF02660 Glycerol-3-phosphate acyltransferase JI729_RS17625 PF01521 Iron-sulphur cluster biosynthesis JI729_RS17630 PF03061 Thioesterase superfamily JI729_RS17635 PF00704 Glycosyl hydrolases family 18 JI729_RS17635 PF01476 LysM domain JI729_RS17645 PF08177 Small acid-soluble spore protein N family JI729_RS17650 PF13040 Fur-regulated basic protein B JI729_RS17655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JI729_RS17655 PF01336 OB-fold nucleic acid binding domain JI729_RS17655 PF00929 Exonuclease JI729_RS17655 PF11490 DNA polymerase III polC-type N-terminus II JI729_RS17655 PF02811 PHP domain JI729_RS17655 PF07733 Bacterial DNA polymerase III alpha NTPase domain JI729_RS17655 PF14579 Helix-hairpin-helix motif JI729_RS17660 PF00578 AhpC/TSA family JI729_RS17670 PF00664 ABC transporter transmembrane region JI729_RS17670 PF00005 ABC transporter JI729_RS17675 PF00330 Aconitase family (aconitate hydratase) JI729_RS17675 PF00694 Aconitase C-terminal domain JI729_RS17685 PF01522 Polysaccharide deacetylase JI729_RS17695 PF08179 Small acid-soluble spore protein P family JI729_RS17705 PF07690 Major Facilitator Superfamily JI729_RS17715 PF02272 DHHA1 domain JI729_RS17715 PF01411 tRNA synthetases class II (A) JI729_RS17715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JI729_RS17720 PF13344 Haloacid dehalogenase-like hydrolase JI729_RS17720 PF00293 NUDIX domain JI729_RS17740 PF02803 Thiolase, C-terminal domain JI729_RS17740 PF00108 Thiolase, N-terminal domain JI729_RS17745 PF13193 AMP-binding enzyme C-terminal domain JI729_RS17745 PF00501 AMP-binding enzyme JI729_RS17750 PF02632 BioY family JI729_RS17755 PF00501 AMP-binding enzyme JI729_RS17755 PF13193 AMP-binding enzyme C-terminal domain JI729_RS17760 PF01381 Helix-turn-helix JI729_RS17780 PF05532 CsbD-like JI729_RS17800 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JI729_RS17800 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JI729_RS17810 PF13426 PAS domain JI729_RS17810 PF13188 PAS domain JI729_RS17810 PF00989 PAS fold JI729_RS17810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS17810 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS17815 PF01738 Dienelactone hydrolase family JI729_RS17820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS17825 PF00474 Sodium:solute symporter family JI729_RS17830 PF01645 Conserved region in glutamate synthase JI729_RS17835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JI729_RS17840 PF02559 CarD-like/TRCF domain JI729_RS17845 PF00491 Arginase family JI729_RS17850 PF01979 Amidohydrolase family JI729_RS17855 PF17392 Urocanase C-terminal domain JI729_RS17855 PF17391 Urocanase N-terminal domain JI729_RS17855 PF01175 Urocanase Rossmann-like domain JI729_RS17860 PF00221 Aromatic amino acid lyase JI729_RS17865 PF09021 HutP JI729_RS17870 PF01209 ubiE/COQ5 methyltransferase family JI729_RS17875 PF01965 DJ-1/PfpI family JI729_RS17890 PF11084 Protein of unknown function (DUF2621) JI729_RS17910 PF07301 Protein of unknown function (DUF1453) JI729_RS17915 PF02683 Cytochrome C biogenesis protein transmembrane region JI729_RS17925 PF01546 Peptidase family M20/M25/M40 JI729_RS17925 PF07687 Peptidase dimerisation domain JI729_RS17935 PF00005 ABC transporter JI729_RS17950 PF03466 LysR substrate binding domain JI729_RS17950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS17955 PF03788 LrgA family JI729_RS17960 PF04172 LrgB-like family JI729_RS17965 PF00293 NUDIX domain JI729_RS17965 PF13344 Haloacid dehalogenase-like hydrolase JI729_RS17975 PF01925 Sulfite exporter TauE/SafE JI729_RS17995 PF08239 Bacterial SH3 domain JI729_RS17995 PF01183 Glycosyl hydrolases family 25 JI729_RS18000 PF00005 ABC transporter JI729_RS18000 PF00664 ABC transporter transmembrane region JI729_RS18005 PF00664 ABC transporter transmembrane region JI729_RS18005 PF00005 ABC transporter JI729_RS18010 PF03672 Uncharacterised protein family (UPF0154) JI729_RS18015 PF10747 Sporulation inhibitor of replication protein SirA JI729_RS18020 PF00456 Transketolase, thiamine diphosphate binding domain JI729_RS18020 PF02779 Transketolase, pyrimidine binding domain JI729_RS18020 PF02780 Transketolase, C-terminal domain JI729_RS18025 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS18030 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS18035 PF00005 ABC transporter JI729_RS18040 PF00497 Bacterial extracellular solute-binding proteins, family 3 JI729_RS18045 PF00149 Calcineurin-like phosphoesterase JI729_RS18045 PF02872 5'-nucleotidase, C-terminal domain JI729_RS18050 PF05979 Bacterial protein of unknown function (DUF896) JI729_RS18055 PF00239 Resolvase, N terminal domain JI729_RS18060 PF01726 LexA DNA binding domain JI729_RS18060 PF00717 Peptidase S24-like JI729_RS18075 PF03551 Transcriptional regulator PadR-like family JI729_RS18085 PF01464 Transglycosylase SLT domain JI729_RS18085 PF01551 Peptidase family M23 JI729_RS18085 PF10145 Phage-related minor tail protein JI729_RS18125 PF00717 Peptidase S24-like JI729_RS18125 PF01726 LexA DNA binding domain JI729_RS18130 PF03951 Glutamine synthetase, beta-Grasp domain JI729_RS18130 PF00120 Glutamine synthetase, catalytic domain JI729_RS18135 PF13411 MerR HTH family regulatory protein JI729_RS18140 PF06838 Methionine gamma-lyase JI729_RS18145 PF01926 50S ribosome-binding GTPase JI729_RS18145 PF16360 GTP-binding GTPase Middle Region JI729_RS18145 PF13167 GTP-binding GTPase N-terminal JI729_RS18150 PF03458 UPF0126 domain JI729_RS18160 PF00004 ATPase family associated with various cellular activities (AAA) JI729_RS18160 PF17866 AAA lid domain JI729_RS18175 PF17209 Hfq protein JI729_RS18190 PF06725 3D domain JI729_RS18190 PF01476 LysM domain JI729_RS18195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JI729_RS18195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JI729_RS18200 PF00294 pfkB family carbohydrate kinase JI729_RS18205 PF08220 DeoR-like helix-turn-helix domain JI729_RS18205 PF00455 DeoR C terminal sensor domain JI729_RS18210 PF00465 Iron-containing alcohol dehydrogenase JI729_RS18215 PF04238 Protein of unknown function (DUF420) JI729_RS18225 PF00324 Amino acid permease JI729_RS18230 PF00704 Glycosyl hydrolases family 18 JI729_RS18230 PF00041 Fibronectin type III domain JI729_RS18235 PF00149 Calcineurin-like phosphoesterase JI729_RS18235 PF10518 TAT (twin-arginine translocation) pathway signal sequence JI729_RS18240 PF01226 Formate/nitrite transporter JI729_RS18245 PF00216 Bacterial DNA-binding protein JI729_RS18255 PF00403 Heavy-metal-associated domain JI729_RS18260 PF00403 Heavy-metal-associated domain JI729_RS18265 PF02583 Metal-sensitive transcriptional repressor JI729_RS18275 PF00756 Putative esterase JI729_RS18280 PF00005 ABC transporter JI729_RS18285 PF01032 FecCD transport family JI729_RS18290 PF01032 FecCD transport family JI729_RS18295 PF01497 Periplasmic binding protein JI729_RS18300 PF03372 Endonuclease/Exonuclease/phosphatase family JI729_RS18305 PF02805 Metal binding domain of Ada JI729_RS18305 PF12833 Helix-turn-helix domain JI729_RS18310 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JI729_RS18310 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JI729_RS18315 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain JI729_RS18315 PF00730 HhH-GPD superfamily base excision DNA repair protein JI729_RS18320 PF01546 Peptidase family M20/M25/M40 JI729_RS18320 PF07687 Peptidase dimerisation domain JI729_RS18340 PF00561 alpha/beta hydrolase fold JI729_RS18345 PF03707 Bacterial signalling protein N terminal repeat JI729_RS18345 PF00990 Diguanylate cyclase, GGDEF domain JI729_RS18345 PF00563 EAL domain JI729_RS18350 PF03033 Glycosyltransferase family 28 N-terminal domain JI729_RS18350 PF04101 Glycosyltransferase family 28 C-terminal domain JI729_RS18360 PF16363 GDP-mannose 4,6 dehydratase JI729_RS18365 PF02719 Polysaccharide biosynthesis protein JI729_RS18365 PF08485 Polysaccharide biosynthesis protein C-terminal JI729_RS18380 PF10787 Uncharacterised protein from bacillus cereus group JI729_RS18385 PF04172 LrgB-like family JI729_RS18390 PF03788 LrgA family JI729_RS18395 PF00392 Bacterial regulatory proteins, gntR family JI729_RS18395 PF00155 Aminotransferase class I and II JI729_RS18405 PF00392 Bacterial regulatory proteins, gntR family JI729_RS18405 PF07702 UTRA domain JI729_RS18410 PF00232 Glycosyl hydrolase family 1 JI729_RS18415 PF00388 Phosphatidylinositol-specific phospholipase C, X domain JI729_RS18420 PF00082 Subtilase family JI729_RS18425 PF07486 Cell Wall Hydrolase JI729_RS18435 PF00884 Sulfatase JI729_RS18440 PF00350 Dynamin family JI729_RS18450 PF08676 MutL C terminal dimerisation domain JI729_RS18450 PF01119 DNA mismatch repair protein, C-terminal domain JI729_RS18455 PF00488 MutS domain V JI729_RS18455 PF05190 MutS family domain IV JI729_RS18455 PF05192 MutS domain III JI729_RS18455 PF05188 MutS domain II JI729_RS18455 PF01624 MutS domain I JI729_RS18460 PF10628 Outer spore coat protein E (CotE) JI729_RS18465 PF06133 Control of competence regulator ComK, YlbF/YmcA JI729_RS18470 PF00919 Uncharacterized protein family UPF0004 JI729_RS18470 PF04055 Radical SAM superfamily JI729_RS18470 PF01938 TRAM domain JI729_RS18475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JI729_RS18480 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JI729_RS18480 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JI729_RS18480 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JI729_RS18485 PF01244 Membrane dipeptidase (Peptidase family M19) JI729_RS18490 PF04232 Stage V sporulation protein S (SpoVS) JI729_RS18495 PF13277 YmdB-like protein JI729_RS18500 PF01966 HD domain JI729_RS18500 PF12072 Domain of unknown function (DUF3552) JI729_RS18500 PF00013 KH domain JI729_RS18505 PF00154 recA bacterial DNA recombination protein JI729_RS18515 PF18146 Damage-inducible protein CinA KH domain JI729_RS18515 PF00994 Probable molybdopterin binding domain JI729_RS18515 PF02464 Competence-damaged protein JI729_RS18520 PF01066 CDP-alcohol phosphatidyltransferase JI729_RS18525 PF13464 Domain of unknown function (DUF4115) JI729_RS18530 PF11868 Protein of unknown function (DUF3388) JI729_RS18535 PF11588 Protein of unknown function (DUF3243) JI729_RS18545 PF05193 Peptidase M16 inactive domain JI729_RS18545 PF00675 Insulinase (Peptidase family M16) JI729_RS18550 PF05193 Peptidase M16 inactive domain JI729_RS18555 PF02653 Branched-chain amino acid transport system / permease component JI729_RS18560 PF02653 Branched-chain amino acid transport system / permease component JI729_RS18565 PF00005 ABC transporter JI729_RS18570 PF02608 ABC transporter substrate-binding protein PnrA-like JI729_RS18575 PF00392 Bacterial regulatory proteins, gntR family JI729_RS18575 PF07702 UTRA domain JI729_RS18580 PF01580 FtsK/SpoIIIE family JI729_RS18580 PF09397 Ftsk gamma domain JI729_RS18580 PF17854 FtsK alpha domain JI729_RS18585 PF14035 YlzJ-like protein JI729_RS18590 PF00574 Clp protease JI729_RS18595 PF00753 Metallo-beta-lactamase superfamily JI729_RS18595 PF17770 Ribonuclease J C-terminal domain JI729_RS18595 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JI729_RS18600 PF00701 Dihydrodipicolinate synthetase family JI729_RS18605 PF13840 ACT domain JI729_RS18605 PF00696 Amino acid kinase family JI729_RS18610 PF01118 Semialdehyde dehydrogenase, NAD binding domain JI729_RS18610 PF02774 Semialdehyde dehydrogenase, dimerisation domain JI729_RS18615 PF02441 Flavoprotein JI729_RS18620 PF14436 Bacterial EndoU nuclease JI729_RS18620 PF04740 LXG domain of WXG superfamily JI729_RS18630 PF01510 N-acetylmuramoyl-L-alanine amidase JI729_RS18660 PF00313 'Cold-shock' DNA-binding domain JI729_RS18670 PF00589 Phage integrase family JI729_RS18715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JI729_RS18715 PF16924 Dipicolinate synthase subunit A N-terminal domain JI729_RS18720 PF05239 PRC-barrel domain JI729_RS18725 PF05193 Peptidase M16 inactive domain JI729_RS18725 PF00675 Insulinase (Peptidase family M16) JI729_RS18730 PF01522 Polysaccharide deacetylase JI729_RS18735 PF00013 KH domain JI729_RS18735 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JI729_RS18735 PF01138 3' exoribonuclease family, domain 1 JI729_RS18735 PF03725 3' exoribonuclease family, domain 2 JI729_RS18735 PF00575 S1 RNA binding domain JI729_RS18740 PF00312 Ribosomal protein S15 JI729_RS18745 PF01687 Riboflavin kinase JI729_RS18745 PF06574 FAD synthetase JI729_RS18750 PF01509 TruB family pseudouridylate synthase (N terminal domain) JI729_RS18750 PF16198 tRNA pseudouridylate synthase B C-terminal domain JI729_RS18755 PF02033 Ribosome-binding factor A JI729_RS18760 PF04456 Protein of unknown function (DUF503) JI729_RS18765 PF04760 Translation initiation factor IF-2, N-terminal region JI729_RS18765 PF00009 Elongation factor Tu GTP binding domain JI729_RS18765 PF11987 Translation-initiation factor 2 JI729_RS18770 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JI729_RS18775 PF04296 Protein of unknown function (DUF448) JI729_RS18780 PF00575 S1 RNA binding domain JI729_RS18780 PF08529 NusA N-terminal domain JI729_RS18780 PF13184 NusA-like KH domain JI729_RS18785 PF17384 RimP C-terminal SH3 domain JI729_RS18785 PF02576 RimP N-terminal domain JI729_RS18790 PF11490 DNA polymerase III polC-type N-terminus II JI729_RS18790 PF14480 DNA polymerase III polC-type N-terminus I JI729_RS18790 PF00929 Exonuclease JI729_RS18790 PF07733 Bacterial DNA polymerase III alpha NTPase domain JI729_RS18790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JI729_RS18790 PF14579 Helix-hairpin-helix motif JI729_RS18790 PF02811 PHP domain JI729_RS18795 PF04073 Aminoacyl-tRNA editing domain JI729_RS18795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JI729_RS18795 PF03129 Anticodon binding domain JI729_RS18800 PF17820 PDZ domain JI729_RS18800 PF02163 Peptidase family M50 JI729_RS18805 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JI729_RS18805 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JI729_RS18805 PF13288 DXP reductoisomerase C-terminal domain JI729_RS18815 PF01255 Putative undecaprenyl diphosphate synthase JI729_RS18820 PF01765 Ribosome recycling factor JI729_RS18825 PF00696 Amino acid kinase family JI729_RS18830 PF00889 Elongation factor TS JI729_RS18835 PF00318 Ribosomal protein S2 JI729_RS18840 PF06018 CodY GAF-like domain JI729_RS18840 PF08222 CodY helix-turn-helix domain JI729_RS18845 PF10431 C-terminal, D2-small domain, of ClpB protein JI729_RS18845 PF07724 AAA domain (Cdc48 subfamily) JI729_RS18845 PF00004 ATPase family associated with various cellular activities (AAA) JI729_RS18850 PF00227 Proteasome subunit JI729_RS18855 PF02899 Phage integrase, N-terminal SAM-like domain JI729_RS18855 PF00589 Phage integrase family JI729_RS18860 PF01134 Glucose inhibited division protein A JI729_RS18865 PF01131 DNA topoisomerase JI729_RS18865 PF01751 Toprim domain JI729_RS18865 PF01396 Topoisomerase DNA binding C4 zinc finger JI729_RS18870 PF02481 DNA recombination-mediator protein A JI729_RS18875 PF02629 CoA binding domain JI729_RS18875 PF00549 CoA-ligase JI729_RS18880 PF00549 CoA-ligase JI729_RS18880 PF08442 ATP-grasp domain JI729_RS18885 PF01351 Ribonuclease HII JI729_RS18890 PF01926 50S ribosome-binding GTPase JI729_RS18895 PF10502 Signal peptidase, peptidase S26 JI729_RS18900 PF01245 Ribosomal protein L19 JI729_RS18905 PF01746 tRNA (Guanine-1)-methyltransferase JI729_RS18910 PF05239 PRC-barrel domain JI729_RS18910 PF01782 RimM N-terminal domain JI729_RS18920 PF00886 Ribosomal protein S16 JI729_RS18925 PF00448 SRP54-type protein, GTPase domain JI729_RS18925 PF02881 SRP54-type protein, helical bundle domain JI729_RS18925 PF02978 Signal peptide binding domain JI729_RS18930 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JI729_RS18935 PF02881 SRP54-type protein, helical bundle domain JI729_RS18935 PF00448 SRP54-type protein, GTPase domain JI729_RS18940 PF02463 RecF/RecN/SMC N terminal domain JI729_RS18940 PF06470 SMC proteins Flexible Hinge Domain JI729_RS18945 PF00035 Double-stranded RNA binding motif JI729_RS18945 PF14622 Ribonuclease-III-like JI729_RS18950 PF00550 Phosphopantetheine attachment site JI729_RS18960 PF00698 Acyl transferase domain JI729_RS18965 PF02504 Fatty acid synthesis protein JI729_RS18970 PF03061 Thioesterase superfamily JI729_RS18975 PF17191 RecG wedge domain JI729_RS18975 PF00270 DEAD/DEAH box helicase JI729_RS18975 PF00271 Helicase conserved C-terminal domain JI729_RS18980 PF13684 Dihydroxyacetone kinase family JI729_RS18980 PF02734 DAK2 domain JI729_RS18985 PF03780 Asp23 family, cell envelope-related function JI729_RS18990 PF00830 Ribosomal L28 family JI729_RS18995 PF08183 Stage V sporulation protein family JI729_RS19000 PF04263 Thiamin pyrophosphokinase, catalytic domain JI729_RS19000 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JI729_RS19005 PF00834 Ribulose-phosphate 3 epimerase family JI729_RS19010 PF03193 RsgA GTPase JI729_RS19010 PF16745 RsgA N-terminal domain JI729_RS19015 PF00069 Protein kinase domain JI729_RS19015 PF03793 PASTA domain JI729_RS19025 PF04055 Radical SAM superfamily JI729_RS19030 PF01029 NusB family JI729_RS19030 PF01189 16S rRNA methyltransferase RsmB/F JI729_RS19035 PF02911 Formyl transferase, C-terminal domain JI729_RS19035 PF00551 Formyl transferase JI729_RS19040 PF01327 Polypeptide deformylase JI729_RS19045 PF04851 Type III restriction enzyme, res subunit JI729_RS19045 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JI729_RS19045 PF18074 Primosomal protein N C-terminal domain JI729_RS19045 PF00271 Helicase conserved C-terminal domain JI729_RS19045 PF17764 3′ DNA-binding domain (3′BD) JI729_RS19050 PF02441 Flavoprotein JI729_RS19050 PF04127 DNA / pantothenate metabolism flavoprotein JI729_RS19055 PF01192 RNA polymerase Rpb6 JI729_RS19060 PF00625 Guanylate kinase JI729_RS19065 PF04025 Domain of unknown function (DUF370) JI729_RS19070 PF03755 YicC-like family, N-terminal region JI729_RS19070 PF08340 Domain of unknown function (DUF1732) JI729_RS19075 PF00689 Cation transporting ATPase, C-terminus JI729_RS19075 PF00690 Cation transporter/ATPase, N-terminus JI729_RS19080 PF05670 NFACT protein RNA binding domain JI729_RS19090 PF01321 Creatinase/Prolidase N-terminal domain JI729_RS19090 PF00557 Metallopeptidase family M24 JI729_RS19110 PF00156 Phosphoribosyl transferase domain JI729_RS19115 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JI729_RS19120 PF01180 Dihydroorotate dehydrogenase JI729_RS19125 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JI729_RS19130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JI729_RS19130 PF02142 MGS-like domain JI729_RS19130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JI729_RS19135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JI729_RS19135 PF00117 Glutamine amidotransferase class-I JI729_RS19140 PF01979 Amidohydrolase family JI729_RS19145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JI729_RS19145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JI729_RS19150 PF00860 Permease family JI729_RS19155 PF00156 Phosphoribosyl transferase domain JI729_RS19160 PF01479 S4 domain JI729_RS19160 PF00849 RNA pseudouridylate synthase JI729_RS19165 PF01252 Signal peptidase (SPase) II JI729_RS19175 PF00133 tRNA synthetases class I (I, L, M and V) JI729_RS19175 PF08264 Anticodon-binding domain of tRNA JI729_RS19175 PF06827 Zinc finger found in FPG and IleRS JI729_RS19180 PF05103 DivIVA protein JI729_RS19185 PF01479 S4 domain JI729_RS19185 PF17774 Putative RNA-binding domain in YlmH JI729_RS19190 PF02325 YGGT family JI729_RS19195 PF04472 Cell division protein SepF JI729_RS19200 PF01168 Alanine racemase, N-terminal domain JI729_RS19205 PF02578 Multi-copper polyphenol oxidoreductase laccase JI729_RS19210 PF05239 PRC-barrel domain JI729_RS19215 PF04542 Sigma-70 region 2 JI729_RS19215 PF04539 Sigma-70 region 3 JI729_RS19215 PF04545 Sigma-70, region 4 JI729_RS19220 PF04542 Sigma-70 region 2 JI729_RS19220 PF04545 Sigma-70, region 4 JI729_RS19225 PF03419 Sporulation factor SpoIIGA JI729_RS19230 PF12327 FtsZ family, C-terminal domain JI729_RS19230 PF00091 Tubulin/FtsZ family, GTPase domain JI729_RS19235 PF02491 SHS2 domain inserted in FTSA JI729_RS19240 PF03799 Cell division protein FtsQ JI729_RS19240 PF08478 POTRA domain, FtsQ-type JI729_RS19245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JI729_RS19245 PF01565 FAD binding domain JI729_RS19250 PF03033 Glycosyltransferase family 28 N-terminal domain JI729_RS19250 PF04101 Glycosyltransferase family 28 C-terminal domain JI729_RS19255 PF01098 Cell cycle protein JI729_RS19260 PF08245 Mur ligase middle domain JI729_RS19260 PF02875 Mur ligase family, glutamate ligase domain JI729_RS19265 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JI729_RS19265 PF00953 Glycosyl transferase family 4 JI729_RS19270 PF08245 Mur ligase middle domain JI729_RS19270 PF02875 Mur ligase family, glutamate ligase domain JI729_RS19270 PF01225 Mur ligase family, catalytic domain JI729_RS19275 PF00905 Penicillin binding protein transpeptidase domain JI729_RS19275 PF03793 PASTA domain JI729_RS19275 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS19280 PF03793 PASTA domain JI729_RS19280 PF00905 Penicillin binding protein transpeptidase domain JI729_RS19280 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS19285 PF04977 Septum formation initiator JI729_RS19290 PF01795 MraW methylase family JI729_RS19295 PF10079 Bacillithiol biosynthesis BshC JI729_RS19300 PF02558 Ketopantoate reductase PanE/ApbA JI729_RS19300 PF08546 Ketopantoate reductase PanE/ApbA C terminal JI729_RS19305 PF00583 Acetyltransferase (GNAT) family JI729_RS19315 PF01783 Ribosomal L32p protein family JI729_RS19320 PF02620 Large ribosomal RNA subunit accumulation protein YceD JI729_RS19325 PF05636 HIGH Nucleotidyl Transferase JI729_RS19330 PF13180 PDZ domain JI729_RS19330 PF05362 Lon protease (S16) C-terminal proteolytic domain JI729_RS19335 PF01734 Patatin-like phospholipase JI729_RS19340 PF07670 Nucleoside recognition JI729_RS19345 PF01467 Cytidylyltransferase-like JI729_RS19360 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JI729_RS19365 PF06133 Control of competence regulator ComK, YlbF/YmcA JI729_RS19370 PF00300 Histidine phosphatase superfamily (branch 1) JI729_RS19375 PF14003 YlbE-like protein JI729_RS19380 PF14071 Putative coat protein JI729_RS19385 PF00188 Cysteine-rich secretory protein family JI729_RS19385 PF14504 CAP-associated N-terminal JI729_RS19390 PF08868 YugN-like family JI729_RS19395 PF00795 Carbon-nitrogen hydrolase JI729_RS19400 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JI729_RS19405 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JI729_RS19410 PF00510 Cytochrome c oxidase subunit III JI729_RS19415 PF00115 Cytochrome C and Quinol oxidase polypeptide I JI729_RS19420 PF00034 Cytochrome c JI729_RS19420 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JI729_RS19420 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JI729_RS19425 PF01040 UbiA prenyltransferase family JI729_RS19430 PF02628 Cytochrome oxidase assembly protein JI729_RS19435 PF02785 Biotin carboxylase C-terminal domain JI729_RS19435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JI729_RS19435 PF00682 HMGL-like JI729_RS19435 PF02436 Conserved carboxylase domain JI729_RS19435 PF00364 Biotin-requiring enzyme JI729_RS19435 PF00289 Biotin carboxylase, N-terminal domain JI729_RS19440 PF01098 Cell cycle protein JI729_RS19445 PF07408 Protein of unknown function (DUF1507) JI729_RS19455 PF02562 PhoH-like protein JI729_RS19455 PF13638 PIN domain JI729_RS19465 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JI729_RS19475 PF14036 YlaH-like protein JI729_RS19480 PF14492 Elongation Factor G, domain II JI729_RS19480 PF00009 Elongation factor Tu GTP binding domain JI729_RS19480 PF03144 Elongation factor Tu domain 2 JI729_RS19480 PF00679 Elongation factor G C-terminus JI729_RS19490 PF00459 Inositol monophosphatase family JI729_RS19500 PF06335 Protein of unknown function (DUF1054) JI729_RS19505 PF05256 Uncharacterised protein family (UPF0223) JI729_RS19510 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JI729_RS19510 PF01276 Orn/Lys/Arg decarboxylase, major domain JI729_RS19550 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS19550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JI729_RS19555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JI729_RS19555 PF00364 Biotin-requiring enzyme JI729_RS19555 PF02817 e3 binding domain JI729_RS19560 PF02779 Transketolase, pyrimidine binding domain JI729_RS19560 PF02780 Transketolase, C-terminal domain JI729_RS19565 PF00676 Dehydrogenase E1 component JI729_RS19575 PF01327 Polypeptide deformylase JI729_RS19585 PF07288 Protein of unknown function (DUF1447) JI729_RS19590 PF17770 Ribonuclease J C-terminal domain JI729_RS19590 PF00753 Metallo-beta-lactamase superfamily JI729_RS19590 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JI729_RS19595 PF02254 TrkA-N domain JI729_RS19595 PF02080 TrkA-C domain JI729_RS19605 PF01546 Peptidase family M20/M25/M40 JI729_RS19605 PF07687 Peptidase dimerisation domain JI729_RS19610 PF00132 Bacterial transferase hexapeptide (six repeats) JI729_RS19610 PF14602 Hexapeptide repeat of succinyl-transferase JI729_RS19610 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JI729_RS19615 PF03466 LysR substrate binding domain JI729_RS19615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS19630 PF04308 Ribonuclease H-like JI729_RS19640 PF08796 Protein of unknown function (DUF1797) JI729_RS19655 PF10388 EAL-domain associated signalling protein domain JI729_RS19655 PF00563 EAL domain JI729_RS19665 PF10518 TAT (twin-arginine translocation) pathway signal sequence JI729_RS19665 PF00149 Calcineurin-like phosphoesterase JI729_RS19675 PF02503 Polyphosphate kinase middle domain JI729_RS19675 PF13089 Polyphosphate kinase N-terminal domain JI729_RS19675 PF17941 Polyphosphate kinase C-terminal domain 1 JI729_RS19675 PF13090 Polyphosphate kinase C-terminal domain 2 JI729_RS19680 PF02541 Ppx/GppA phosphatase family JI729_RS19685 PF14177 YkyB-like protein JI729_RS19710 PF07690 Major Facilitator Superfamily JI729_RS19720 PF01717 Cobalamin-independent synthase, Catalytic domain JI729_RS19720 PF08267 Cobalamin-independent synthase, N-terminal domain JI729_RS19730 PF14040 Deoxyribonuclease NucA/NucB JI729_RS19740 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS19740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS19750 PF00155 Aminotransferase class I and II JI729_RS19755 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JI729_RS19755 PF00356 Bacterial regulatory proteins, lacI family JI729_RS19760 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS19765 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS19770 PF13416 Bacterial extracellular solute-binding protein JI729_RS19775 PF02903 Alpha amylase, N-terminal ig-like domain JI729_RS19775 PF16657 Maltogenic Amylase, C-terminal domain JI729_RS19775 PF00128 Alpha amylase, catalytic domain JI729_RS19780 PF00128 Alpha amylase, catalytic domain JI729_RS19780 PF16657 Maltogenic Amylase, C-terminal domain JI729_RS19785 PF00005 ABC transporter JI729_RS19785 PF03459 TOBE domain JI729_RS19785 PF17912 MalK OB fold domain JI729_RS19825 PF00108 Thiolase, N-terminal domain JI729_RS19825 PF02803 Thiolase, C-terminal domain JI729_RS19830 PF00293 NUDIX domain JI729_RS19855 PF03551 Transcriptional regulator PadR-like family JI729_RS19870 PF01008 Initiation factor 2 subunit family JI729_RS19875 PF01636 Phosphotransferase enzyme family JI729_RS19880 PF00795 Carbon-nitrogen hydrolase JI729_RS19885 PF00155 Aminotransferase class I and II JI729_RS19890 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JI729_RS19890 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JI729_RS19900 PF00596 Class II Aldolase and Adducin N-terminal domain JI729_RS19905 PF03079 ARD/ARD' family JI729_RS19920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JI729_RS19920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JI729_RS19925 PF00144 Beta-lactamase JI729_RS19930 PF08448 PAS fold JI729_RS19930 PF00990 Diguanylate cyclase, GGDEF domain JI729_RS19935 PF00881 Nitroreductase family JI729_RS19950 PF02896 PEP-utilising enzyme, TIM barrel domain JI729_RS19950 PF05524 PEP-utilising enzyme, N-terminal JI729_RS19950 PF00391 PEP-utilising enzyme, mobile domain JI729_RS19955 PF00381 PTS HPr component phosphorylation site JI729_RS19960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JI729_RS19960 PF02378 Phosphotransferase system, EIIC JI729_RS19960 PF00367 phosphotransferase system, EIIB JI729_RS19965 PF00874 PRD domain JI729_RS19965 PF03123 CAT RNA binding domain JI729_RS19975 PF00392 Bacterial regulatory proteins, gntR family JI729_RS19975 PF07702 UTRA domain JI729_RS19980 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JI729_RS19985 PF01979 Amidohydrolase family JI729_RS19995 PF04079 Segregation and condensation complex subunit ScpB JI729_RS20000 PF02616 Segregation and condensation protein ScpA JI729_RS20010 PF03745 Domain of unknown function (DUF309) JI729_RS20015 PF00583 Acetyltransferase (GNAT) family JI729_RS20020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JI729_RS20025 PF06207 Protein of unknown function (DUF1002) JI729_RS20035 PF03323 Bacillus/Clostridium GerA spore germination protein JI729_RS20040 PF14097 Stage V sporulation protein AE1 JI729_RS20045 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JI729_RS20050 PF07451 Stage V sporulation protein AD (SpoVAD) JI729_RS20055 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JI729_RS20060 PF13782 Stage V sporulation protein AB JI729_RS20065 PF12164 Stage V sporulation protein AA JI729_RS20075 PF00209 Sodium:neurotransmitter symporter family JI729_RS20080 PF04545 Sigma-70, region 4 JI729_RS20080 PF04539 Sigma-70 region 3 JI729_RS20080 PF04542 Sigma-70 region 2 JI729_RS20085 PF13581 Histidine kinase-like ATPase domain JI729_RS20090 PF01740 STAS domain JI729_RS20095 PF07943 Penicillin-binding protein 5, C-terminal domain JI729_RS20095 PF00768 D-alanyl-D-alanine carboxypeptidase JI729_RS20100 PF00392 Bacterial regulatory proteins, gntR family JI729_RS20105 PF00005 ABC transporter JI729_RS20120 PF01047 MarR family JI729_RS20130 PF00860 Permease family JI729_RS20135 PF01544 CorA-like Mg2+ transporter protein JI729_RS20140 PF02885 Glycosyl transferase family, helical bundle domain JI729_RS20140 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JI729_RS20140 PF00591 Glycosyl transferase family, a/b domain JI729_RS20145 PF01048 Phosphorylase superfamily JI729_RS20150 PF01676 Metalloenzyme superfamily JI729_RS20155 PF13115 YtkA-like JI729_RS20160 PF02899 Phage integrase, N-terminal SAM-like domain JI729_RS20160 PF00589 Phage integrase family JI729_RS20165 PF14004 Protein of unknown function (DUF4227) JI729_RS20170 PF01475 Ferric uptake regulator family JI729_RS20175 PF01944 Stage II sporulation protein M JI729_RS20185 PF00293 NUDIX domain JI729_RS20190 PF13072 Mother cell inhibitor of FtsZ JI729_RS20195 PF00248 Aldo/keto reductase family JI729_RS20200 PF00248 Aldo/keto reductase family JI729_RS20205 PF13673 Acetyltransferase (GNAT) domain JI729_RS20205 PF04229 GrpB protein JI729_RS20215 PF00746 LPXTG cell wall anchor motif JI729_RS20215 PF02872 5'-nucleotidase, C-terminal domain JI729_RS20215 PF00565 Staphylococcal nuclease homologue JI729_RS20215 PF00149 Calcineurin-like phosphoesterase JI729_RS20225 PF12146 Serine aminopeptidase, S33 JI729_RS20230 PF13726 Na+-H+ antiporter family JI729_RS20230 PF03553 Na+/H+ antiporter family JI729_RS20235 PF00356 Bacterial regulatory proteins, lacI family JI729_RS20240 PF00583 Acetyltransferase (GNAT) family JI729_RS20245 PF12146 Serine aminopeptidase, S33 JI729_RS20250 PF10827 Protein of unknown function (DUF2552) JI729_RS20260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JI729_RS20260 PF01872 RibD C-terminal domain JI729_RS20265 PF00677 Lumazine binding domain JI729_RS20270 PF00925 GTP cyclohydrolase II JI729_RS20270 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JI729_RS20275 PF00885 6,7-dimethyl-8-ribityllumazine synthase JI729_RS20285 PF06968 Biotin and Thiamin Synthesis associated domain JI729_RS20285 PF04055 Radical SAM superfamily JI729_RS20290 PF13847 Methyltransferase domain JI729_RS20295 PF08241 Methyltransferase domain JI729_RS20295 PF12697 Alpha/beta hydrolase family JI729_RS20300 PF00155 Aminotransferase class I and II JI729_RS20310 PF00202 Aminotransferase class-III JI729_RS20320 PF03553 Na+/H+ antiporter family JI729_RS20325 PF02872 5'-nucleotidase, C-terminal domain JI729_RS20325 PF00149 Calcineurin-like phosphoesterase JI729_RS20335 PF01037 Lrp/AsnC ligand binding domain JI729_RS20335 PF13404 AsnC-type helix-turn-helix domain JI729_RS20350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JI729_RS20350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JI729_RS20355 PF00202 Aminotransferase class-III JI729_RS20360 PF00696 Amino acid kinase family JI729_RS20365 PF01960 ArgJ family JI729_RS20370 PF01118 Semialdehyde dehydrogenase, NAD binding domain JI729_RS20370 PF02774 Semialdehyde dehydrogenase, dimerisation domain JI729_RS20380 PF00106 short chain dehydrogenase JI729_RS20385 PF00753 Metallo-beta-lactamase superfamily JI729_RS20390 PF14748 Pyrroline-5-carboxylate reductase dimerisation JI729_RS20390 PF03807 NADP oxidoreductase coenzyme F420-dependent JI729_RS20395 PF03313 Serine dehydratase alpha chain JI729_RS20400 PF01842 ACT domain JI729_RS20400 PF03315 Serine dehydratase beta chain JI729_RS20410 PF00753 Metallo-beta-lactamase superfamily JI729_RS20410 PF12706 Beta-lactamase superfamily domain JI729_RS20425 PF00689 Cation transporting ATPase, C-terminus JI729_RS20425 PF00690 Cation transporter/ATPase, N-terminus JI729_RS20430 PF02308 MgtC family JI729_RS20435 PF11798 IMS family HHH motif JI729_RS20435 PF11799 impB/mucB/samB family C-terminal domain JI729_RS20435 PF00817 impB/mucB/samB family JI729_RS20440 PF07687 Peptidase dimerisation domain JI729_RS20440 PF01546 Peptidase family M20/M25/M40 JI729_RS20445 PF13302 Acetyltransferase (GNAT) domain JI729_RS20460 PF03734 L,D-transpeptidase catalytic domain JI729_RS20465 PF06081 Aromatic acid exporter family member 1 JI729_RS20465 PF11728 Putative aromatic acid exporter C-terminal domain JI729_RS20470 PF00005 ABC transporter JI729_RS20475 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS20480 PF00497 Bacterial extracellular solute-binding proteins, family 3 JI729_RS20485 PF06491 Disulphide isomerase JI729_RS20495 PF09297 NADH pyrophosphatase zinc ribbon domain JI729_RS20495 PF00293 NUDIX domain JI729_RS20500 PF04239 Protein of unknown function (DUF421) JI729_RS20505 PF01098 Cell cycle protein JI729_RS20510 PF00364 Biotin-requiring enzyme JI729_RS20510 PF02817 e3 binding domain JI729_RS20510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JI729_RS20515 PF02780 Transketolase, C-terminal domain JI729_RS20515 PF02779 Transketolase, pyrimidine binding domain JI729_RS20520 PF00676 Dehydrogenase E1 component JI729_RS20525 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS20525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JI729_RS20530 PF00871 Acetokinase family JI729_RS20535 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JI729_RS20535 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JI729_RS20540 PF01515 Phosphate acetyl/butaryl transferase JI729_RS20545 PF00158 Sigma-54 interaction domain JI729_RS20545 PF02954 Bacterial regulatory protein, Fis family JI729_RS20545 PF00989 PAS fold JI729_RS20555 PF03009 Glycerophosphoryl diester phosphodiesterase family JI729_RS20560 PF14174 YycC-like protein JI729_RS20570 PF00072 Response regulator receiver domain JI729_RS20570 PF08769 Sporulation initiation factor Spo0A C terminal JI729_RS20575 PF17820 PDZ domain JI729_RS20575 PF05580 SpoIVB peptidase S55 JI729_RS20580 PF13476 AAA domain JI729_RS20585 PF01316 Arginine repressor, DNA binding domain JI729_RS20585 PF02863 Arginine repressor, C-terminal domain JI729_RS20590 PF01728 FtsJ-like methyltransferase JI729_RS20590 PF01479 S4 domain JI729_RS20595 PF02780 Transketolase, C-terminal domain JI729_RS20595 PF02779 Transketolase, pyrimidine binding domain JI729_RS20595 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JI729_RS20600 PF00348 Polyprenyl synthetase JI729_RS20605 PF02609 Exonuclease VII small subunit JI729_RS20610 PF13742 OB-fold nucleic acid binding domain JI729_RS20610 PF02601 Exonuclease VII, large subunit JI729_RS20615 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JI729_RS20615 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JI729_RS20620 PF01029 NusB family JI729_RS20625 PF03780 Asp23 family, cell envelope-related function JI729_RS20630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JI729_RS20630 PF00289 Biotin carboxylase, N-terminal domain JI729_RS20630 PF02785 Biotin carboxylase C-terminal domain JI729_RS20635 PF00364 Biotin-requiring enzyme JI729_RS20645 PF12685 SpoIIIAH-like protein JI729_RS20655 PF09581 Stage III sporulation protein AF (Spore_III_AF) JI729_RS20660 PF09546 Stage III sporulation protein AE (spore_III_AE) JI729_RS20665 PF06686 Stage III sporulation protein AC/AD protein family JI729_RS20670 PF06686 Stage III sporulation protein AC/AD protein family JI729_RS20675 PF09548 Stage III sporulation protein AB (spore_III_AB) JI729_RS20700 PF01132 Elongation factor P (EF-P) OB domain JI729_RS20700 PF09285 Elongation factor P, C-terminal JI729_RS20700 PF08207 Elongation factor P (EF-P) KOW-like domain JI729_RS20705 PF00557 Metallopeptidase family M24 JI729_RS20705 PF01321 Creatinase/Prolidase N-terminal domain JI729_RS20710 PF01220 Dehydroquinase class II JI729_RS20715 PF11085 Conserved membrane protein YqhR JI729_RS20720 PF07136 Protein of unknown function (DUF1385) JI729_RS20730 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS20735 PF02742 Iron dependent repressor, metal binding and dimerisation domain JI729_RS20735 PF01325 Iron dependent repressor, N-terminal DNA binding domain JI729_RS20760 PF03099 Biotin/lipoate A/B protein ligase family JI729_RS20765 PF00581 Rhodanese-like domain JI729_RS20775 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JI729_RS20775 PF00356 Bacterial regulatory proteins, lacI family JI729_RS20785 PF00893 Small Multidrug Resistance protein JI729_RS20790 PF00893 Small Multidrug Resistance protein JI729_RS20820 PF00005 ABC transporter JI729_RS20825 PF00392 Bacterial regulatory proteins, gntR family JI729_RS20840 PF02347 Glycine cleavage system P-protein JI729_RS20845 PF02347 Glycine cleavage system P-protein JI729_RS20850 PF08669 Glycine cleavage T-protein C-terminal barrel domain JI729_RS20850 PF01571 Aminomethyltransferase folate-binding domain JI729_RS20855 PF00271 Helicase conserved C-terminal domain JI729_RS20855 PF00176 SNF2 family N-terminal domain JI729_RS20860 PF11079 Bacterial protein YqhG of unknown function JI729_RS20880 PF14038 YqzE-like protein JI729_RS20885 PF01202 Shikimate kinase JI729_RS20920 PF00482 Type II secretion system (T2SS), protein F JI729_RS20925 PF00437 Type II/IV secretion system protein JI729_RS20935 PF11117 Protein of unknown function (DUF2626) JI729_RS20940 PF00375 Sodium:dicarboxylate symporter family JI729_RS20975 PF04101 Glycosyltransferase family 28 C-terminal domain JI729_RS20975 PF03033 Glycosyltransferase family 28 N-terminal domain JI729_RS20980 PF02574 Homocysteine S-methyltransferase JI729_RS20980 PF00809 Pterin binding enzyme JI729_RS20980 PF02965 Vitamin B12 dependent methionine synthase, activation domain JI729_RS20980 PF02607 B12 binding domain JI729_RS20980 PF02310 B12 binding domain JI729_RS20985 PF02574 Homocysteine S-methyltransferase JI729_RS20985 PF02219 Methylenetetrahydrofolate reductase JI729_RS20990 PF01053 Cys/Met metabolism PLP-dependent enzyme JI729_RS20995 PF01053 Cys/Met metabolism PLP-dependent enzyme JI729_RS21005 PF01022 Bacterial regulatory protein, arsR family JI729_RS21015 PF00753 Metallo-beta-lactamase superfamily JI729_RS21020 PF10958 Protein of unknown function (DUF2759) JI729_RS21025 PF00480 ROK family JI729_RS21030 PF06014 Bacterial protein of unknown function (DUF910) JI729_RS21035 PF01812 5-formyltetrahydrofolate cyclo-ligase family JI729_RS21040 PF00471 Ribosomal protein L33 JI729_RS21045 PF00483 Nucleotidyl transferase JI729_RS21050 PF01895 PhoU domain JI729_RS21055 PF00005 ABC transporter JI729_RS21060 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS21065 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS21070 PF12849 PBP superfamily domain JI729_RS21075 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS21075 PF00905 Penicillin binding protein transpeptidase domain JI729_RS21080 PF07690 Major Facilitator Superfamily JI729_RS21085 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JI729_RS21085 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JI729_RS21095 PF06691 Protein of unknown function (DUF1189) JI729_RS21105 PF04551 GcpE protein JI729_RS21110 PF01475 Ferric uptake regulator family JI729_RS21115 PF00950 ABC 3 transport family JI729_RS21120 PF00005 ABC transporter JI729_RS21125 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JI729_RS21125 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JI729_RS21130 PF11116 Protein of unknown function (DUF2624) JI729_RS21135 PF01261 Xylose isomerase-like TIM barrel JI729_RS21140 PF00271 Helicase conserved C-terminal domain JI729_RS21140 PF00270 DEAD/DEAH box helicase JI729_RS21150 PF02401 LytB protein JI729_RS21155 PF01784 NIF3 (NGG1p interacting factor 3) JI729_RS21160 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JI729_RS21165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JI729_RS21170 PF04545 Sigma-70, region 4 JI729_RS21170 PF04542 Sigma-70 region 2 JI729_RS21170 PF00140 Sigma-70 factor, region 1.2 JI729_RS21170 PF04539 Sigma-70 region 3 JI729_RS21170 PF03979 Sigma-70 factor, region 1.1 JI729_RS21175 PF01807 CHC2 zinc finger JI729_RS21175 PF10410 DnaB-helicase binding domain of primase JI729_RS21175 PF08275 DNA primase catalytic core, N-terminal domain JI729_RS21180 PF03618 Kinase/pyrophosphorylase JI729_RS21185 PF08279 HTH domain JI729_RS21185 PF00571 CBS domain JI729_RS21190 PF11967 Recombination protein O N terminal JI729_RS21190 PF02565 Recombination protein O C terminal JI729_RS21200 PF07650 KH domain JI729_RS21200 PF01926 50S ribosome-binding GTPase JI729_RS21205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JI729_RS21210 PF01219 Prokaryotic diacylglycerol kinase JI729_RS21215 PF02130 Uncharacterized protein family UPF0054 JI729_RS21220 PF07698 7TM receptor with intracellular HD hydrolase JI729_RS21220 PF01966 HD domain JI729_RS21220 PF07697 7TM-HD extracellular JI729_RS21225 PF02562 PhoH-like protein JI729_RS21230 PF06898 Putative stage IV sporulation protein YqfD JI729_RS21235 PF07873 YabP family JI729_RS21240 PF09424 Yqey-like protein JI729_RS21245 PF01165 Ribosomal protein S21 JI729_RS21250 PF00919 Uncharacterized protein family UPF0004 JI729_RS21250 PF04055 Radical SAM superfamily JI729_RS21250 PF01938 TRAM domain JI729_RS21255 PF04452 RNA methyltransferase JI729_RS21265 PF00226 DnaJ domain JI729_RS21265 PF00684 DnaJ central domain JI729_RS21265 PF01556 DnaJ C terminal domain JI729_RS21270 PF00012 Hsp70 protein JI729_RS21275 PF01025 GrpE JI729_RS21280 PF01628 HrcA protein C terminal domain JI729_RS21285 PF04055 Radical SAM superfamily JI729_RS21285 PF06969 HemN C-terminal domain JI729_RS21290 PF01638 HxlR-like helix-turn-helix JI729_RS21295 PF00009 Elongation factor Tu GTP binding domain JI729_RS21295 PF00679 Elongation factor G C-terminus JI729_RS21295 PF06421 GTP-binding protein LepA C-terminus JI729_RS21295 PF03144 Elongation factor Tu domain 2 JI729_RS21305 PF03418 Germination protease JI729_RS21310 PF01649 Ribosomal protein S20 JI729_RS21315 PF06144 DNA polymerase III, delta subunit JI729_RS21320 PF14141 YqzM-like protein JI729_RS21325 PF13567 Domain of unknown function (DUF4131) JI729_RS21325 PF03772 Competence protein JI729_RS21325 PF00753 Metallo-beta-lactamase superfamily JI729_RS21330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JI729_RS21335 PF10531 SLBB domain JI729_RS21340 PF03807 NADP oxidoreductase coenzyme F420-dependent JI729_RS21340 PF14748 Pyrroline-5-carboxylate reductase dimerisation JI729_RS21345 PF13649 Methyltransferase domain JI729_RS21355 PF01966 HD domain JI729_RS21360 PF01467 Cytidylyltransferase-like JI729_RS21365 PF01985 CRS1 / YhbY (CRM) domain JI729_RS21370 PF08501 Shikimate dehydrogenase substrate binding domain JI729_RS21370 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JI729_RS21370 PF01488 Shikimate / quinate 5-dehydrogenase JI729_RS21375 PF01926 50S ribosome-binding GTPase JI729_RS21390 PF02666 Phosphatidylserine decarboxylase JI729_RS21395 PF04542 Sigma-70 region 2 JI729_RS21395 PF04545 Sigma-70, region 4 JI729_RS21405 PF16244 Domain of unknown function (DUF4901) JI729_RS21410 PF00471 Ribosomal protein L33 JI729_RS21415 PF00881 Nitroreductase family JI729_RS21420 PF04607 Region found in RelA / SpoT proteins JI729_RS21430 PF00245 Alkaline phosphatase JI729_RS21435 PF00583 Acetyltransferase (GNAT) family JI729_RS21440 PF08386 TAP-like protein JI729_RS21440 PF00561 alpha/beta hydrolase fold JI729_RS21475 PF02225 PA domain JI729_RS21475 PF05922 Peptidase inhibitor I9 JI729_RS21475 PF13860 FlgD Ig-like domain JI729_RS21475 PF00082 Subtilase family JI729_RS21480 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JI729_RS21490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JI729_RS21495 PF07681 DoxX JI729_RS21525 PF00005 ABC transporter JI729_RS21530 PF01032 FecCD transport family JI729_RS21535 PF01497 Periplasmic binding protein JI729_RS21540 PF14143 YrhC-like protein JI729_RS21545 PF00171 Aldehyde dehydrogenase family JI729_RS21545 PF00465 Iron-containing alcohol dehydrogenase JI729_RS21550 PF01053 Cys/Met metabolism PLP-dependent enzyme JI729_RS21555 PF00291 Pyridoxal-phosphate dependent enzyme JI729_RS21560 PF01048 Phosphorylase superfamily JI729_RS21565 PF08241 Methyltransferase domain JI729_RS21580 PF03717 Penicillin-binding Protein dimerisation domain JI729_RS21580 PF00905 Penicillin binding protein transpeptidase domain JI729_RS21590 PF01272 Transcription elongation factor, GreA/GreB, C-term JI729_RS21590 PF03449 Transcription elongation factor, N-terminal JI729_RS21595 PF00485 Phosphoribulokinase / Uridine kinase family JI729_RS21600 PF01136 Peptidase family U32 JI729_RS21600 PF16325 Peptidase family U32 C-terminal domain JI729_RS21605 PF01136 Peptidase family U32 JI729_RS21610 PF01596 O-methyltransferase JI729_RS21615 PF02618 YceG-like family JI729_RS21620 PF06949 Protein of unknown function (DUF1292) JI729_RS21625 PF03652 Holliday junction resolvase JI729_RS21630 PF06135 IreB regulatory phosphoprotein JI729_RS21635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JI729_RS21635 PF01411 tRNA synthetases class II (A) JI729_RS21635 PF02272 DHHA1 domain JI729_RS21645 PF01594 AI-2E family transporter JI729_RS21665 PF14490 Helix-hairpin-helix containing domain JI729_RS21665 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JI729_RS21665 PF13538 UvrD-like helicase C-terminal domain JI729_RS21680 PF00266 Aminotransferase class-V JI729_RS21685 PF02082 Transcriptional regulator JI729_RS21690 PF16193 AAA C-terminal domain JI729_RS21690 PF12002 MgsA AAA+ ATPase C terminal JI729_RS21690 PF05496 Holliday junction DNA helicase RuvB P-loop domain JI729_RS21700 PF00899 ThiF family JI729_RS21705 PF02938 GAD domain JI729_RS21705 PF00152 tRNA synthetases class II (D, K and N) JI729_RS21705 PF01336 OB-fold nucleic acid binding domain JI729_RS21710 PF03129 Anticodon binding domain JI729_RS21710 PF13393 Histidyl-tRNA synthetase JI729_RS21720 PF02580 D-Tyr-tRNA(Tyr) deacylase JI729_RS21725 PF13291 ACT domain JI729_RS21725 PF02824 TGS domain JI729_RS21725 PF04607 Region found in RelA / SpoT proteins JI729_RS21730 PF00156 Phosphoribosyl transferase domain JI729_RS21735 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JI729_RS21735 PF17768 RecJ OB domain JI729_RS21735 PF01368 DHH family JI729_RS21735 PF02272 DHHA1 domain JI729_RS21740 PF01545 Cation efflux family JI729_RS21740 PF16916 Dimerisation domain of Zinc Transporter JI729_RS21745 PF02355 Protein export membrane protein JI729_RS21745 PF07549 SecD/SecF GG Motif JI729_RS21750 PF13797 Post-transcriptional regulator JI729_RS21755 PF14667 Polysaccharide biosynthesis C-terminal domain JI729_RS21755 PF01943 Polysaccharide biosynthesis protein JI729_RS21760 PF04239 Protein of unknown function (DUF421) JI729_RS21770 PF02699 Preprotein translocase subunit JI729_RS21775 PF01702 Queuine tRNA-ribosyltransferase JI729_RS21780 PF02547 Queuosine biosynthesis protein JI729_RS21785 PF11146 Protein of unknown function (DUF2905) JI729_RS21790 PF05491 RuvB C-terminal winged helix domain JI729_RS21790 PF17864 RuvB AAA lid domain JI729_RS21790 PF05496 Holliday junction DNA helicase RuvB P-loop domain JI729_RS21795 PF07499 RuvA, C-terminal domain JI729_RS21795 PF01330 RuvA N terminal domain JI729_RS21800 PF01497 Periplasmic binding protein JI729_RS21820 PF01476 LysM domain JI729_RS21825 PF02445 Quinolinate synthetase A protein JI729_RS21830 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JI729_RS21830 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JI729_RS21835 PF02910 Fumarate reductase flavoprotein C-term JI729_RS21835 PF00890 FAD binding domain JI729_RS21840 PF00266 Aminotransferase class-V JI729_RS21845 PF08279 HTH domain JI729_RS21845 PF02829 3H domain JI729_RS21850 PF03473 MOSC domain JI729_RS21850 PF03475 3-alpha domain JI729_RS21860 PF00800 Prephenate dehydratase JI729_RS21860 PF01842 ACT domain JI729_RS21865 PF02687 FtsX-like permease family JI729_RS21870 PF02687 FtsX-like permease family JI729_RS21875 PF00005 ABC transporter JI729_RS21880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS21885 PF00486 Transcriptional regulatory protein, C terminal JI729_RS21885 PF00072 Response regulator receiver domain JI729_RS21890 PF01926 50S ribosome-binding GTPase JI729_RS21890 PF01018 GTP1/OBG JI729_RS21890 PF09269 Domain of unknown function (DUF1967) JI729_RS21895 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JI729_RS21895 PF14682 Sporulation initiation phospho-transferase B, C-terminal JI729_RS21900 PF01016 Ribosomal L27 protein JI729_RS21905 PF04327 Cysteine protease Prp JI729_RS21910 PF00829 Ribosomal prokaryotic L21 protein JI729_RS21915 PF10150 Ribonuclease E/G family JI729_RS21915 PF00575 S1 RNA binding domain JI729_RS21920 PF02163 Peptidase family M50 JI729_RS21925 PF01551 Peptidase family M23 JI729_RS21930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JI729_RS21935 PF03775 Septum formation inhibitor MinC, C-terminal domain JI729_RS21945 PF04085 rod shape-determining protein MreC JI729_RS21955 PF04002 RadC-like JAB domain JI729_RS21960 PF02545 Maf-like protein JI729_RS21970 PF08245 Mur ligase middle domain JI729_RS21970 PF02875 Mur ligase family, glutamate ligase domain JI729_RS21975 PF00133 tRNA synthetases class I (I, L, M and V) JI729_RS21975 PF08264 Anticodon-binding domain of tRNA JI729_RS21975 PF10458 Valyl tRNA synthetase tRNA binding arm JI729_RS21985 PF01476 LysM domain JI729_RS21990 PF00202 Aminotransferase class-III JI729_RS21995 PF00490 Delta-aminolevulinic acid dehydratase JI729_RS22000 PF02602 Uroporphyrinogen-III synthase HemD JI729_RS22005 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JI729_RS22005 PF03900 Porphobilinogen deaminase, C-terminal domain JI729_RS22010 PF01578 Cytochrome C assembly protein JI729_RS22015 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JI729_RS22015 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JI729_RS22015 PF01488 Shikimate / quinate 5-dehydrogenase JI729_RS22020 PF01047 MarR family JI729_RS22025 PF02566 OsmC-like protein JI729_RS22030 PF01926 50S ribosome-binding GTPase JI729_RS22035 PF05362 Lon protease (S16) C-terminal proteolytic domain JI729_RS22035 PF00004 ATPase family associated with various cellular activities (AAA) JI729_RS22035 PF02190 ATP-dependent protease La (LON) substrate-binding domain JI729_RS22040 PF00004 ATPase family associated with various cellular activities (AAA) JI729_RS22040 PF05362 Lon protease (S16) C-terminal proteolytic domain JI729_RS22045 PF06689 ClpX C4-type zinc finger JI729_RS22045 PF10431 C-terminal, D2-small domain, of ClpB protein JI729_RS22045 PF07724 AAA domain (Cdc48 subfamily) JI729_RS22050 PF05697 Bacterial trigger factor protein (TF) JI729_RS22050 PF05698 Bacterial trigger factor protein (TF) C-terminus JI729_RS22050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JI729_RS22070 PF11724 YvbH-like oligomerisation region JI729_RS22070 PF08000 Bacterial PH domain JI729_RS22110 PF12850 Calcineurin-like phosphoesterase superfamily domain JI729_RS22115 PF01725 Ham1 family JI729_RS22120 PF03725 3' exoribonuclease family, domain 2 JI729_RS22120 PF01138 3' exoribonuclease family, domain 1 JI729_RS22125 PF10646 Sporulation and spore germination JI729_RS22130 PF01177 Asp/Glu/Hydantoin racemase JI729_RS22140 PF00196 Bacterial regulatory proteins, luxR family JI729_RS22145 PF00860 Permease family JI729_RS22150 PF07969 Amidohydrolase family JI729_RS22155 PF04024 PspC domain JI729_RS22160 PF01381 Helix-turn-helix JI729_RS22160 PF07883 Cupin domain JI729_RS22165 PF13536 Putative multidrug resistance efflux transporter JI729_RS22170 PF00230 Major intrinsic protein JI729_RS22175 PF02082 Transcriptional regulator JI729_RS22185 PF13732 Domain of unknown function (DUF4162) JI729_RS22185 PF00005 ABC transporter JI729_RS22190 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JI729_RS22195 PF13677 Membrane MotB of proton-channel complex MotA/MotB JI729_RS22195 PF00691 OmpA family JI729_RS22200 PF01618 MotA/TolQ/ExbB proton channel family JI729_RS22205 PF02557 D-alanyl-D-alanine carboxypeptidase JI729_RS22210 PF03061 Thioesterase superfamily JI729_RS22215 PF13183 4Fe-4S dicluster domain JI729_RS22215 PF13085 2Fe-2S iron-sulfur cluster binding domain JI729_RS22220 PF00890 FAD binding domain JI729_RS22220 PF02910 Fumarate reductase flavoprotein C-term JI729_RS22225 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JI729_RS22230 PF10702 Protein of unknown function (DUF2507) JI729_RS22235 PF08459 UvrC Helix-hairpin-helix N-terminal JI729_RS22235 PF02151 UvrB/uvrC motif JI729_RS22235 PF01541 GIY-YIG catalytic domain JI729_RS22240 PF00085 Thioredoxin JI729_RS22245 PF01012 Electron transfer flavoprotein domain JI729_RS22245 PF00766 Electron transfer flavoprotein FAD-binding domain JI729_RS22250 PF01012 Electron transfer flavoprotein domain JI729_RS22255 PF00378 Enoyl-CoA hydratase/isomerase JI729_RS22260 PF00440 Bacterial regulatory proteins, tetR family JI729_RS22260 PF08359 YsiA-like protein, C-terminal region JI729_RS22265 PF00501 AMP-binding enzyme JI729_RS22265 PF13193 AMP-binding enzyme C-terminal domain JI729_RS22275 PF01497 Periplasmic binding protein JI729_RS22280 PF01032 FecCD transport family JI729_RS22295 PF05163 DinB family JI729_RS22325 PF00005 ABC transporter JI729_RS22330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS22330 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS22335 PF00072 Response regulator receiver domain JI729_RS22335 PF00486 Transcriptional regulatory protein, C terminal JI729_RS22345 PF09962 Uncharacterized conserved protein (DUF2196) JI729_RS22350 PF10672 S-adenosylmethionine-dependent methyltransferase JI729_RS22350 PF17785 PUA-like domain JI729_RS22355 PF03992 Antibiotic biosynthesis monooxygenase JI729_RS22360 PF04203 Sortase domain JI729_RS22365 PF00005 ABC transporter JI729_RS22370 PF01032 FecCD transport family JI729_RS22375 PF01497 Periplasmic binding protein JI729_RS22380 PF05031 Iron Transport-associated domain JI729_RS22390 PF05031 Iron Transport-associated domain JI729_RS22395 PF05525 Branched-chain amino acid transport protein JI729_RS22400 PF01479 S4 domain JI729_RS22400 PF00849 RNA pseudouridylate synthase JI729_RS22405 PF00488 MutS domain V JI729_RS22405 PF01713 Smr domain JI729_RS22410 PF14791 DNA polymerase beta thumb JI729_RS22410 PF02811 PHP domain JI729_RS22410 PF14716 Helix-hairpin-helix domain JI729_RS22415 PF02674 Colicin V production protein JI729_RS22420 PF05164 Cell division protein ZapA JI729_RS22425 PF11858 Domain of unknown function (DUF3378) JI729_RS22425 PF01351 Ribonuclease HII JI729_RS22445 PF01336 OB-fold nucleic acid binding domain JI729_RS22445 PF00152 tRNA synthetases class II (D, K and N) JI729_RS22450 PF03147 Ferredoxin-fold anticodon binding domain JI729_RS22450 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JI729_RS22450 PF03484 tRNA synthetase B5 domain JI729_RS22450 PF01588 Putative tRNA binding domain JI729_RS22450 PF03483 B3/4 domain JI729_RS22455 PF01409 tRNA synthetases class II core domain (F) JI729_RS22455 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JI729_RS22460 PF00588 SpoU rRNA Methylase family JI729_RS22460 PF08032 RNA 2'-O ribose methyltransferase substrate binding JI729_RS22465 PF14098 Small, acid-soluble spore protein I JI729_RS22470 PF01966 HD domain JI729_RS22490 PF07690 Major Facilitator Superfamily JI729_RS22500 PF00440 Bacterial regulatory proteins, tetR family JI729_RS22500 PF16859 Tetracyclin repressor-like, C-terminal domain JI729_RS22505 PF05343 M42 glutamyl aminopeptidase JI729_RS22515 PF00453 Ribosomal protein L20 JI729_RS22520 PF01632 Ribosomal protein L35 JI729_RS22525 PF05198 Translation initiation factor IF-3, N-terminal domain JI729_RS22525 PF00707 Translation initiation factor IF-3, C-terminal domain JI729_RS22530 PF02824 TGS domain JI729_RS22530 PF03129 Anticodon binding domain JI729_RS22530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JI729_RS22530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JI729_RS22535 PF08812 YtxC-like family JI729_RS22540 PF13783 Domain of unknown function (DUF4177) JI729_RS22545 PF01695 IstB-like ATP binding protein JI729_RS22545 PF07319 Primosomal protein DnaI N-terminus JI729_RS22550 PF07261 Replication initiation and membrane attachment JI729_RS22555 PF03477 ATP cone domain JI729_RS22560 PF02675 S-adenosylmethionine decarboxylase JI729_RS22565 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JI729_RS22565 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JI729_RS22570 PF01121 Dephospho-CoA kinase JI729_RS22575 PF02659 Putative manganese efflux pump JI729_RS22580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JI729_RS22580 PF06827 Zinc finger found in FPG and IleRS JI729_RS22580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JI729_RS22585 PF01367 5'-3' exonuclease, C-terminal SAM fold JI729_RS22585 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JI729_RS22585 PF00476 DNA polymerase family A JI729_RS22590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS22590 PF00989 PAS fold JI729_RS22590 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS22590 PF16736 Single Cache-like JI729_RS22595 PF00072 Response regulator receiver domain JI729_RS22595 PF00486 Transcriptional regulatory protein, C terminal JI729_RS22610 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JI729_RS22610 PF00056 lactate/malate dehydrogenase, NAD binding domain JI729_RS22615 PF00180 Isocitrate/isopropylmalate dehydrogenase JI729_RS22620 PF00285 Citrate synthase, C-terminal domain JI729_RS22625 PF04284 Protein of unknown function (DUF441) JI729_RS22630 PF01594 AI-2E family transporter JI729_RS22635 PF04186 FxsA cytoplasmic membrane protein JI729_RS22640 PF00224 Pyruvate kinase, barrel domain JI729_RS22640 PF00391 PEP-utilising enzyme, mobile domain JI729_RS22640 PF02887 Pyruvate kinase, alpha/beta domain JI729_RS22645 PF00365 Phosphofructokinase JI729_RS22650 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JI729_RS22655 PF17848 Acetyl-coA carboxylase zinc finger domain JI729_RS22655 PF01039 Carboxyl transferase domain JI729_RS22660 PF00392 Bacterial regulatory proteins, gntR family JI729_RS22665 PF03949 Malic enzyme, NAD binding domain JI729_RS22665 PF00390 Malic enzyme, N-terminal domain JI729_RS22670 PF02811 PHP domain JI729_RS22670 PF14579 Helix-hairpin-helix motif JI729_RS22670 PF01336 OB-fold nucleic acid binding domain JI729_RS22670 PF07733 Bacterial DNA polymerase III alpha NTPase domain JI729_RS22670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JI729_RS22675 PF14034 Sporulation protein YtrH JI729_RS22685 PF02272 DHHA1 domain JI729_RS22685 PF01368 DHH family JI729_RS22690 PF14007 YtpI-like protein JI729_RS22700 PF00392 Bacterial regulatory proteins, gntR family JI729_RS22700 PF07085 DRTGG domain JI729_RS22700 PF00571 CBS domain JI729_RS22700 PF03061 Thioesterase superfamily JI729_RS22715 PF01321 Creatinase/Prolidase N-terminal domain JI729_RS22715 PF00557 Metallopeptidase family M24 JI729_RS22750 PF12746 GNAT acetyltransferase JI729_RS22755 PF07883 Cupin domain JI729_RS22765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JI729_RS22765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JI729_RS22775 PF00582 Universal stress protein family JI729_RS22795 PF00206 Lyase JI729_RS22795 PF14698 Argininosuccinate lyase C-terminal JI729_RS22800 PF00764 Arginosuccinate synthase JI729_RS22815 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JI729_RS22815 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JI729_RS22820 PF12787 EcsC protein family JI729_RS22835 PF00871 Acetokinase family JI729_RS22840 PF02384 N-6 DNA Methylase JI729_RS22845 PF08534 Redoxin JI729_RS22850 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JI729_RS22860 PF01513 ATP-NAD kinase JI729_RS22865 PF07969 Amidohydrolase family JI729_RS22875 PF13193 AMP-binding enzyme C-terminal domain JI729_RS22875 PF00501 AMP-binding enzyme JI729_RS22880 PF00269 Small, acid-soluble spore proteins, alpha/beta type JI729_RS22885 PF02926 THUMP domain JI729_RS22885 PF02568 Thiamine biosynthesis protein (ThiI) JI729_RS22890 PF00266 Aminotransferase class-V JI729_RS22895 PF06160 Septation ring formation regulator, EzrA JI729_RS22900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS22900 PF03466 LysR substrate binding domain JI729_RS22905 PF00892 EamA-like transporter family JI729_RS22910 PF00440 Bacterial regulatory proteins, tetR family JI729_RS22915 PF13185 GAF domain JI729_RS22920 PF01053 Cys/Met metabolism PLP-dependent enzyme JI729_RS22925 PF01479 S4 domain JI729_RS22925 PF00163 Ribosomal protein S4/S9 N-terminal domain JI729_RS22930 PF14436 Bacterial EndoU nuclease JI729_RS22930 PF04740 LXG domain of WXG superfamily JI729_RS22970 PF01479 S4 domain JI729_RS22970 PF00579 tRNA synthetases class I (W and Y) JI729_RS22980 PF08281 Sigma-70, region 4 JI729_RS22980 PF04542 Sigma-70 region 2 JI729_RS22990 PF12464 Maltose acetyltransferase JI729_RS22990 PF14602 Hexapeptide repeat of succinyl-transferase JI729_RS22995 PF13193 AMP-binding enzyme C-terminal domain JI729_RS22995 PF00501 AMP-binding enzyme JI729_RS23000 PF00583 Acetyltransferase (GNAT) family JI729_RS23005 PF00571 CBS domain JI729_RS23010 PF00850 Histone deacetylase domain JI729_RS23025 PF00486 Transcriptional regulatory protein, C terminal JI729_RS23025 PF00072 Response regulator receiver domain JI729_RS23030 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS23030 PF00989 PAS fold JI729_RS23030 PF16736 Single Cache-like JI729_RS23030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS23035 PF12796 Ankyrin repeats (3 copies) JI729_RS23040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JI729_RS23045 PF01741 Large-conductance mechanosensitive channel, MscL JI729_RS23070 PF00356 Bacterial regulatory proteins, lacI family JI729_RS23075 PF00793 DAHP synthetase I family JI729_RS23075 PF01817 Chorismate mutase type II JI729_RS23080 PF07537 CamS sex pheromone cAM373 precursor JI729_RS23085 PF11009 Protein of unknown function (DUF2847) JI729_RS23095 PF02073 Thermophilic metalloprotease (M29) JI729_RS23110 PF13302 Acetyltransferase (GNAT) domain JI729_RS23115 PF01225 Mur ligase family, catalytic domain JI729_RS23115 PF08245 Mur ligase middle domain JI729_RS23115 PF02875 Mur ligase family, glutamate ligase domain JI729_RS23125 PF01580 FtsK/SpoIIIE family JI729_RS23125 PF09397 Ftsk gamma domain JI729_RS23125 PF17854 FtsK alpha domain JI729_RS23130 PF01520 N-acetylmuramoyl-L-alanine amidase JI729_RS23130 PF01476 LysM domain JI729_RS23140 PF14794 Domain of unknown function (DUF4479) JI729_RS23140 PF01588 Putative tRNA binding domain JI729_RS23145 PF07285 Protein of unknown function (DUF1444) JI729_RS23150 PF00085 Thioredoxin JI729_RS23155 PF01931 Protein of unknown function DUF84 JI729_RS23160 PF05343 M42 glutamyl aminopeptidase JI729_RS23170 PF00753 Metallo-beta-lactamase superfamily JI729_RS23175 PF02390 Putative methyltransferase JI729_RS23180 PF14165 YtzH-like protein JI729_RS23185 PF01636 Phosphotransferase enzyme family JI729_RS23190 PF00128 Alpha amylase, catalytic domain JI729_RS23190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JI729_RS23190 PF17999 Pullulanase N1-terminal domain JI729_RS23195 PF02834 LigT like Phosphoesterase JI729_RS23200 PF01546 Peptidase family M20/M25/M40 JI729_RS23205 PF08220 DeoR-like helix-turn-helix domain JI729_RS23210 PF01479 S4 domain JI729_RS23210 PF00849 RNA pseudouridylate synthase JI729_RS23215 PF14667 Polysaccharide biosynthesis C-terminal domain JI729_RS23215 PF01943 Polysaccharide biosynthesis protein JI729_RS23225 PF07690 Major Facilitator Superfamily JI729_RS23230 PF01022 Bacterial regulatory protein, arsR family JI729_RS23235 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JI729_RS23245 PF10957 Sporulation protein Cse60 JI729_RS23255 PF02559 CarD-like/TRCF domain JI729_RS23265 PF06800 Sugar transport protein JI729_RS23280 PF02391 MoaE protein JI729_RS23285 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JI729_RS23290 PF00994 Probable molybdopterin binding domain JI729_RS23290 PF03453 MoeA N-terminal region (domain I and II) JI729_RS23290 PF03454 MoeA C-terminal region (domain IV) JI729_RS23295 PF01967 MoaC family JI729_RS23300 PF00899 ThiF family JI729_RS23305 PF06463 Molybdenum Cofactor Synthesis C JI729_RS23305 PF04055 Radical SAM superfamily JI729_RS23325 PF00581 Rhodanese-like domain JI729_RS23335 PF00561 alpha/beta hydrolase fold JI729_RS23340 PF03323 Bacillus/Clostridium GerA spore germination protein JI729_RS23345 PF03845 Spore germination protein JI729_RS23375 PF00133 tRNA synthetases class I (I, L, M and V) JI729_RS23375 PF08264 Anticodon-binding domain of tRNA JI729_RS23375 PF13603 Leucyl-tRNA synthetase, Domain 2 JI729_RS23375 PF09334 tRNA synthetases class I (M) JI729_RS23380 PF07690 Major Facilitator Superfamily JI729_RS23385 PF00999 Sodium/hydrogen exchanger family JI729_RS23390 PF02080 TrkA-C domain JI729_RS23395 PF00589 Phage integrase family JI729_RS23405 PF00005 ABC transporter JI729_RS23410 PF04235 Protein of unknown function (DUF418) JI729_RS23410 PF07786 Protein of unknown function (DUF1624) JI729_RS23420 PF10732 Protein of unknown function (DUF2524) JI729_RS23425 PF16199 Radical_SAM C-terminal domain JI729_RS23425 PF04055 Radical SAM superfamily JI729_RS23430 PF06962 Putative rRNA methylase JI729_RS23435 PF01177 Asp/Glu/Hydantoin racemase JI729_RS23445 PF10776 Protein of unknown function (DUF2600) JI729_RS23450 PF12146 Serine aminopeptidase, S33 JI729_RS23455 PF00132 Bacterial transferase hexapeptide (six repeats) JI729_RS23460 PF01569 PAP2 superfamily JI729_RS23465 PF13439 Glycosyltransferase Family 4 JI729_RS23465 PF00534 Glycosyl transferases group 1 JI729_RS23470 PF12804 MobA-like NTP transferase domain JI729_RS23475 PF00994 Probable molybdopterin binding domain JI729_RS23490 PF13302 Acetyltransferase (GNAT) domain JI729_RS23495 PF00438 S-adenosylmethionine synthetase, N-terminal domain JI729_RS23495 PF02772 S-adenosylmethionine synthetase, central domain JI729_RS23495 PF02773 S-adenosylmethionine synthetase, C-terminal domain JI729_RS23500 PF01293 Phosphoenolpyruvate carboxykinase JI729_RS23535 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS23535 PF13188 PAS domain JI729_RS23535 PF13426 PAS domain JI729_RS23535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS23535 PF00989 PAS fold JI729_RS23540 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS23540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS23540 PF02743 Cache domain JI729_RS23550 PF08386 TAP-like protein JI729_RS23550 PF00561 alpha/beta hydrolase fold JI729_RS23555 PF00884 Sulfatase JI729_RS23580 PF00005 ABC transporter JI729_RS23585 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS23600 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS23610 PF00293 NUDIX domain JI729_RS23640 PF02664 S-Ribosylhomocysteinase (LuxS) JI729_RS23645 PF01809 Putative membrane protein insertion efficiency factor JI729_RS23650 PF00484 Carbonic anhydrase JI729_RS23655 PF01654 Cytochrome bd terminal oxidase subunit I JI729_RS23660 PF02322 Cytochrome bd terminal oxidase subunit II JI729_RS23665 PF10676 Spore germination protein gerPA/gerPF JI729_RS23675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JI729_RS23675 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JI729_RS23695 PF04012 PspA/IM30 family JI729_RS23710 PF07670 Nucleoside recognition JI729_RS23710 PF02421 Ferrous iron transport protein B JI729_RS23710 PF17910 FeoB cytosolic helical domain JI729_RS23710 PF07664 Ferrous iron transport protein B C terminus JI729_RS23720 PF09515 Thiamine transporter protein (Thia_YuaJ) JI729_RS23725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS23725 PF00672 HAMP domain JI729_RS23725 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS23730 PF00486 Transcriptional regulatory protein, C terminal JI729_RS23730 PF00072 Response regulator receiver domain JI729_RS23755 PF00156 Phosphoribosyl transferase domain JI729_RS23760 PF00781 Diacylglycerol kinase catalytic domain JI729_RS23795 PF09335 SNARE associated Golgi protein JI729_RS23800 PF00398 Ribosomal RNA adenine dimethylase JI729_RS23805 PF02687 FtsX-like permease family JI729_RS23810 PF00005 ABC transporter JI729_RS23815 PF06445 GyrI-like small molecule binding domain JI729_RS23815 PF12833 Helix-turn-helix domain JI729_RS23825 PF00005 ABC transporter JI729_RS23830 PF07853 Protein of unknown function (DUF1648) JI729_RS23830 PF13630 SdpI/YhfL protein family JI729_RS23835 PF01022 Bacterial regulatory protein, arsR family JI729_RS23840 PF00486 Transcriptional regulatory protein, C terminal JI729_RS23840 PF00072 Response regulator receiver domain JI729_RS23845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS23850 PF02687 FtsX-like permease family JI729_RS23855 PF02687 FtsX-like permease family JI729_RS23860 PF00005 ABC transporter JI729_RS23865 PF02687 FtsX-like permease family JI729_RS23875 PF02447 GntP family permease JI729_RS23880 PF00392 Bacterial regulatory proteins, gntR family JI729_RS23880 PF07702 UTRA domain JI729_RS23890 PF07071 KDGP aldolase JI729_RS23895 PF03841 L-seryl-tRNA selenium transferase JI729_RS23900 PF01979 Amidohydrolase family JI729_RS23905 PF02557 D-alanyl-D-alanine carboxypeptidase JI729_RS23910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS23910 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS23915 PF00486 Transcriptional regulatory protein, C terminal JI729_RS23915 PF00072 Response regulator receiver domain JI729_RS23920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JI729_RS23920 PF13378 Enolase C-terminal domain-like JI729_RS23925 PF12323 Helix-turn-helix domain JI729_RS23925 PF01385 Probable transposase JI729_RS23925 PF07282 Putative transposase DNA-binding domain JI729_RS23935 PF13193 AMP-binding enzyme C-terminal domain JI729_RS23935 PF00501 AMP-binding enzyme JI729_RS23940 PF00378 Enoyl-CoA hydratase/isomerase JI729_RS23945 PF12697 Alpha/beta hydrolase family JI729_RS23950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JI729_RS23950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JI729_RS23950 PF16582 Middle domain of thiamine pyrophosphate JI729_RS23955 PF00425 chorismate binding enzyme JI729_RS23960 PF01040 UbiA prenyltransferase family JI729_RS23965 PF01258 Prokaryotic dksA/traR C4-type zinc finger JI729_RS23970 PF00313 'Cold-shock' DNA-binding domain JI729_RS23990 PF00343 Carbohydrate phosphorylase JI729_RS23995 PF00534 Glycosyl transferases group 1 JI729_RS23995 PF08323 Starch synthase catalytic domain JI729_RS24000 PF00483 Nucleotidyl transferase JI729_RS24005 PF00483 Nucleotidyl transferase JI729_RS24010 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JI729_RS24010 PF00128 Alpha amylase, catalytic domain JI729_RS24010 PF02806 Alpha amylase, C-terminal all-beta domain JI729_RS24025 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JI729_RS24025 PF00056 lactate/malate dehydrogenase, NAD binding domain JI729_RS24120 PF05698 Bacterial trigger factor protein (TF) C-terminus JI729_RS24120 PF05697 Bacterial trigger factor protein (TF) JI729_RS24155 PF02308 MgtC family JI729_RS24160 PF07885 Ion channel JI729_RS24160 PF02254 TrkA-N domain JI729_RS24165 PF08868 YugN-like family JI729_RS24170 PF00342 Phosphoglucose isomerase JI729_RS24175 PF04070 Domain of unknown function (DUF378) JI729_RS24180 PF00575 S1 RNA binding domain JI729_RS24185 PF00155 Aminotransferase class I and II JI729_RS24190 PF01037 Lrp/AsnC ligand binding domain JI729_RS24195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JI729_RS24195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JI729_RS24200 PF08386 TAP-like protein JI729_RS24200 PF00561 alpha/beta hydrolase fold JI729_RS24210 PF00155 Aminotransferase class I and II JI729_RS24225 PF08810 Kinase associated protein B JI729_RS24230 PF00929 Exonuclease JI729_RS24235 PF03600 Citrate transporter JI729_RS24250 PF03129 Anticodon binding domain JI729_RS24250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JI729_RS24255 PF03061 Thioesterase superfamily JI729_RS24265 PF02632 BioY family JI729_RS24270 PF00483 Nucleotidyl transferase JI729_RS24275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JI729_RS24275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JI729_RS24275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JI729_RS24275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JI729_RS24280 PF10372 Bacterial membrane-spanning protein N-terminus JI729_RS24280 PF02457 DisA bacterial checkpoint controller nucleotide-binding JI729_RS24295 PF00892 EamA-like transporter family JI729_RS24300 PF01040 UbiA prenyltransferase family JI729_RS24310 PF02789 Cytosol aminopeptidase family, N-terminal domain JI729_RS24310 PF00883 Cytosol aminopeptidase family, catalytic domain JI729_RS24315 PF06725 3D domain JI729_RS24325 PF00293 NUDIX domain JI729_RS24325 PF13344 Haloacid dehalogenase-like hydrolase JI729_RS24330 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS24335 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS24345 PF06445 GyrI-like small molecule binding domain JI729_RS24360 PF04463 Protein of unknown function (DUF523) JI729_RS24370 PF01521 Iron-sulphur cluster biosynthesis JI729_RS24375 PF01678 Diaminopimelate epimerase JI729_RS24380 PF07293 Protein of unknown function (DUF1450) JI729_RS24385 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS24395 PF09383 NIL domain JI729_RS24395 PF00005 ABC transporter JI729_RS24400 PF03649 Uncharacterised protein family (UPF0014) JI729_RS24405 PF03831 PhnA domain JI729_RS24405 PF08274 PhnA Zinc-Ribbon JI729_RS24450 PF13427 Domain of unknown function (DUF4111) JI729_RS24450 PF01909 Nucleotidyltransferase domain JI729_RS24455 PF07315 Protein of unknown function (DUF1462) JI729_RS24460 PF01106 NifU-like domain JI729_RS24475 PF04608 Phosphatidylglycerophosphatase A JI729_RS24495 PF15608 PELOTA RNA binding domain JI729_RS24495 PF11202 Phosphoribosyl transferase (PRTase) JI729_RS24505 PF02525 Flavodoxin-like fold JI729_RS24510 PF13344 Haloacid dehalogenase-like hydrolase JI729_RS24520 PF01934 Protein of unknown function DUF86 JI729_RS24525 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JI729_RS24540 PF06265 Protein of unknown function (DUF1027) JI729_RS24545 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JI729_RS24550 PF07739 TipAS antibiotic-recognition domain JI729_RS24550 PF13411 MerR HTH family regulatory protein JI729_RS24555 PF10086 YhfC intramembrane metalloprotease JI729_RS24575 PF04055 Radical SAM superfamily JI729_RS24575 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JI729_RS24580 PF01551 Peptidase family M23 JI729_RS24585 PF09560 Sporulation protein YunB (Spo_YunB) JI729_RS24590 PF08827 Domain of unknown function (DUF1805) JI729_RS24595 PF02872 5'-nucleotidase, C-terminal domain JI729_RS24600 PF01458 Uncharacterized protein family (UPF0051) JI729_RS24605 PF01592 NifU-like N terminal domain JI729_RS24610 PF00266 Aminotransferase class-V JI729_RS24615 PF01458 Uncharacterized protein family (UPF0051) JI729_RS24620 PF00005 ABC transporter JI729_RS24625 PF03180 NLPA lipoprotein JI729_RS24630 PF03180 NLPA lipoprotein JI729_RS24635 PF00528 Binding-protein-dependent transport system inner membrane component JI729_RS24640 PF09383 NIL domain JI729_RS24640 PF00005 ABC transporter JI729_RS24650 PF00085 Thioredoxin JI729_RS24655 PF01751 Toprim domain JI729_RS24660 PF01597 Glycine cleavage H-protein JI729_RS24665 PF03960 ArsC family JI729_RS24685 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JI729_RS24685 PF00056 lactate/malate dehydrogenase, NAD binding domain JI729_RS24705 PF13305 Tetracyclin repressor-like, C-terminal domain JI729_RS24705 PF00440 Bacterial regulatory proteins, tetR family JI729_RS24710 PF00753 Metallo-beta-lactamase superfamily JI729_RS24715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JI729_RS24715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JI729_RS24715 PF02770 Acyl-CoA dehydrogenase, middle domain JI729_RS24720 PF00108 Thiolase, N-terminal domain JI729_RS24720 PF02803 Thiolase, C-terminal domain JI729_RS24725 PF00378 Enoyl-CoA hydratase/isomerase JI729_RS24725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JI729_RS24725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JI729_RS24730 PF14115 YuzL-like protein JI729_RS24735 PF00768 D-alanyl-D-alanine carboxypeptidase JI729_RS24735 PF07943 Penicillin-binding protein 5, C-terminal domain JI729_RS24740 PF01619 Proline dehydrogenase JI729_RS24745 PF10835 Protein of unknown function (DUF2573) JI729_RS24750 PF01910 Thiamine-binding protein JI729_RS24755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS24755 PF00672 HAMP domain JI729_RS24755 PF02743 Cache domain JI729_RS24770 PF07690 Major Facilitator Superfamily JI729_RS24775 PF13520 Amino acid permease JI729_RS24790 PF02096 60Kd inner membrane protein JI729_RS24800 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JI729_RS24800 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JI729_RS24835 PF09335 SNARE associated Golgi protein JI729_RS24845 PF03734 L,D-transpeptidase catalytic domain JI729_RS24845 PF17969 L,D-transpeptidase C-terminal domain JI729_RS24850 PF00486 Transcriptional regulatory protein, C terminal JI729_RS24850 PF00072 Response regulator receiver domain JI729_RS24855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS24855 PF16736 Single Cache-like JI729_RS24855 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS24855 PF00989 PAS fold JI729_RS24870 PF08264 Anticodon-binding domain of tRNA JI729_RS24870 PF09334 tRNA synthetases class I (M) JI729_RS24880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS24880 PF00672 HAMP domain JI729_RS24880 PF02743 Cache domain JI729_RS24885 PF02743 Cache domain JI729_RS24885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS24885 PF00672 HAMP domain JI729_RS24890 PF01883 Iron-sulfur cluster assembly protein JI729_RS24895 PF02868 Thermolysin metallopeptidase, alpha-helical domain JI729_RS24895 PF03413 Peptidase propeptide and YPEB domain JI729_RS24895 PF07504 Fungalysin/Thermolysin Propeptide Motif JI729_RS24895 PF01447 Thermolysin metallopeptidase, catalytic domain JI729_RS24900 PF17954 Quercetinase C-terminal cupin domain JI729_RS24900 PF02678 Pirin JI729_RS24905 PF01047 MarR family JI729_RS24915 PF00999 Sodium/hydrogen exchanger family JI729_RS24920 PF02080 TrkA-C domain JI729_RS24925 PF01235 Sodium:alanine symporter family JI729_RS24930 PF00210 Ferritin-like domain JI729_RS24945 PF03641 Possible lysine decarboxylase JI729_RS24955 PF00210 Ferritin-like domain JI729_RS24960 PF04235 Protein of unknown function (DUF418) JI729_RS24965 PF01773 Na+ dependent nucleoside transporter N-terminus JI729_RS24965 PF07662 Na+ dependent nucleoside transporter C-terminus JI729_RS24970 PF01773 Na+ dependent nucleoside transporter N-terminus JI729_RS24970 PF07662 Na+ dependent nucleoside transporter C-terminus JI729_RS24975 PF01235 Sodium:alanine symporter family JI729_RS24980 PF01235 Sodium:alanine symporter family JI729_RS24985 PF13460 NAD(P)H-binding JI729_RS25000 PF00248 Aldo/keto reductase family JI729_RS25005 PF07690 Major Facilitator Superfamily JI729_RS25010 PF01638 HxlR-like helix-turn-helix JI729_RS25015 PF07849 Protein of unknown function (DUF1641) JI729_RS25020 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS25025 PF01479 S4 domain JI729_RS25025 PF00579 tRNA synthetases class I (W and Y) JI729_RS25030 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JI729_RS25030 PF01565 FAD binding domain JI729_RS25040 PF17202 Single cache domain 3 JI729_RS25040 PF00672 HAMP domain JI729_RS25040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS25050 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JI729_RS25055 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JI729_RS25070 PF07690 Major Facilitator Superfamily JI729_RS25075 PF00005 ABC transporter JI729_RS25075 PF12848 ABC transporter JI729_RS25080 PF13302 Acetyltransferase (GNAT) domain JI729_RS25090 PF06146 Phosphate-starvation-inducible E JI729_RS25100 PF00857 Isochorismatase family JI729_RS25105 PF01037 Lrp/AsnC ligand binding domain JI729_RS25115 PF01289 Thiol-activated cytolysin JI729_RS25115 PF17440 Thiol-activated cytolysin beta sandwich domain JI729_RS25120 PF00005 ABC transporter JI729_RS25125 PF01032 FecCD transport family JI729_RS25130 PF01032 FecCD transport family JI729_RS25140 PF00486 Transcriptional regulatory protein, C terminal JI729_RS25140 PF00072 Response regulator receiver domain JI729_RS25150 PF01668 SmpB protein JI729_RS25160 PF00773 RNB domain JI729_RS25160 PF00575 S1 RNA binding domain JI729_RS25160 PF08206 Ribonuclease B OB domain JI729_RS25160 PF17876 Cold shock domain JI729_RS25165 PF12146 Serine aminopeptidase, S33 JI729_RS25170 PF03840 Preprotein translocase SecG subunit JI729_RS25175 PF04172 LrgB-like family JI729_RS25180 PF03788 LrgA family JI729_RS25185 PF01156 Inosine-uridine preferring nucleoside hydrolase JI729_RS25190 PF03952 Enolase, N-terminal domain JI729_RS25190 PF00113 Enolase, C-terminal TIM barrel domain JI729_RS25195 PF01676 Metalloenzyme superfamily JI729_RS25195 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JI729_RS25200 PF00121 Triosephosphate isomerase JI729_RS25205 PF00162 Phosphoglycerate kinase JI729_RS25210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JI729_RS25210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JI729_RS25215 PF04198 Putative sugar-binding domain JI729_RS25225 PF00309 Sigma-54 factor, Activator interacting domain (AID) JI729_RS25225 PF04552 Sigma-54, DNA binding domain JI729_RS25225 PF04963 Sigma-54 factor, core binding domain JI729_RS25235 PF13732 Domain of unknown function (DUF4162) JI729_RS25235 PF00005 ABC transporter JI729_RS25240 PF07730 Histidine kinase JI729_RS25240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS25245 PF00196 Bacterial regulatory proteins, luxR family JI729_RS25245 PF00072 Response regulator receiver domain JI729_RS25265 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JI729_RS25270 PF07451 Stage V sporulation protein AD (SpoVAD) JI729_RS25275 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JI729_RS25285 PF04239 Protein of unknown function (DUF421) JI729_RS25290 PF00574 Clp protease JI729_RS25295 PF00381 PTS HPr component phosphorylation site JI729_RS25300 PF10298 WhiA N-terminal LAGLIDADG-like domain JI729_RS25300 PF14527 WhiA LAGLIDADG-like domain JI729_RS25300 PF02650 WhiA C-terminal HTH domain JI729_RS25305 PF01933 Uncharacterised protein family UPF0052 JI729_RS25310 PF03668 P-loop ATPase protein family JI729_RS25315 PF00293 NUDIX domain JI729_RS25325 PF07992 Pyridine nucleotide-disulphide oxidoreductase JI729_RS25335 PF14602 Hexapeptide repeat of succinyl-transferase JI729_RS25340 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS25345 PF01790 Prolipoprotein diacylglyceryl transferase JI729_RS25350 PF07475 HPr Serine kinase C-terminal domain JI729_RS25350 PF02603 HPr Serine kinase N terminus JI729_RS25355 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JI729_RS25365 PF17760 UvrA interaction domain JI729_RS25365 PF17755 UvrA DNA-binding domain JI729_RS25365 PF00005 ABC transporter JI729_RS25370 PF17757 UvrB interaction domain JI729_RS25370 PF00271 Helicase conserved C-terminal domain JI729_RS25370 PF04851 Type III restriction enzyme, res subunit JI729_RS25370 PF12344 Ultra-violet resistance protein B JI729_RS25370 PF02151 UvrB/uvrC motif JI729_RS25380 PF13411 MerR HTH family regulatory protein JI729_RS25380 PF07739 TipAS antibiotic-recognition domain JI729_RS25395 PF03601 Conserved hypothetical protein 698 JI729_RS25400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS25400 PF03466 LysR substrate binding domain JI729_RS25405 PF00376 MerR family regulatory protein JI729_RS25405 PF09278 MerR, DNA binding JI729_RS25410 PF03358 NADPH-dependent FMN reductase JI729_RS25415 PF00005 ABC transporter JI729_RS25415 PF12848 ABC transporter JI729_RS25420 PF01906 Putative heavy-metal-binding JI729_RS25425 PF00664 ABC transporter transmembrane region JI729_RS25425 PF00005 ABC transporter JI729_RS25430 PF17820 PDZ domain JI729_RS25435 PF17820 PDZ domain JI729_RS25435 PF01471 Putative peptidoglycan binding domain JI729_RS25435 PF03572 Peptidase family S41 JI729_RS25440 PF02687 FtsX-like permease family JI729_RS25440 PF18075 FtsX extracellular domain JI729_RS25445 PF00005 ABC transporter JI729_RS25460 PF01043 SecA preprotein cross-linking domain JI729_RS25460 PF02810 SEC-C motif JI729_RS25460 PF07516 SecA Wing and Scaffold domain JI729_RS25460 PF07517 SecA DEAD-like domain JI729_RS25470 PF00005 ABC transporter JI729_RS25500 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JI729_RS25500 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JI729_RS25505 PF00313 'Cold-shock' DNA-binding domain JI729_RS25515 PF00271 Helicase conserved C-terminal domain JI729_RS25515 PF04851 Type III restriction enzyme, res subunit JI729_RS25520 PF00877 NlpC/P60 family JI729_RS25520 PF01476 LysM domain JI729_RS25525 PF01638 HxlR-like helix-turn-helix JI729_RS25530 PF02645 Uncharacterised protein, DegV family COG1307 JI729_RS25535 PF09186 Domain of unknown function (DUF1949) JI729_RS25535 PF01205 Uncharacterized protein family UPF0029 JI729_RS25540 PF03816 Cell envelope-related transcriptional attenuator domain JI729_RS25545 PF02350 UDP-N-acetylglucosamine 2-epimerase JI729_RS25550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JI729_RS25550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JI729_RS25550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JI729_RS25555 PF00953 Glycosyl transferase family 4 JI729_RS25560 PF01522 Polysaccharide deacetylase JI729_RS25565 PF00158 Sigma-54 interaction domain JI729_RS25565 PF03610 PTS system fructose IIA component JI729_RS25565 PF00874 PRD domain JI729_RS25575 PF02417 Chromate transporter JI729_RS25580 PF04794 YdjC-like protein JI729_RS25585 PF11975 Family 4 glycosyl hydrolase C-terminal domain JI729_RS25585 PF02056 Family 4 glycosyl hydrolase JI729_RS25590 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JI729_RS25595 PF02378 Phosphotransferase system, EIIC JI729_RS25600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JI729_RS25605 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JI729_RS25610 PF02378 Phosphotransferase system, EIIC JI729_RS25615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JI729_RS25620 PF00375 Sodium:dicarboxylate symporter family JI729_RS25640 PF03466 LysR substrate binding domain JI729_RS25640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JI729_RS25655 PF01654 Cytochrome bd terminal oxidase subunit I JI729_RS25660 PF02322 Cytochrome bd terminal oxidase subunit II JI729_RS25665 PF02040 Arsenical pump membrane protein JI729_RS25670 PF13667 ThiC-associated domain JI729_RS25670 PF01964 Radical SAM ThiC family JI729_RS25675 PF02652 L-lactate permease JI729_RS25685 PF09988 Uncharacterized metal-binding protein (DUF2227) JI729_RS25695 PF00884 Sulfatase JI729_RS25700 PF01063 Amino-transferase class IV JI729_RS25705 PF00877 NlpC/P60 family JI729_RS25705 PF01476 LysM domain JI729_RS25710 PF01773 Na+ dependent nucleoside transporter N-terminus JI729_RS25710 PF07662 Na+ dependent nucleoside transporter C-terminus JI729_RS25725 PF02028 BCCT, betaine/carnitine/choline family transporter JI729_RS25730 PF01476 LysM domain JI729_RS25730 PF06725 3D domain JI729_RS25755 PF04434 SWIM zinc finger JI729_RS25760 PF12419 SNF2 Helicase protein JI729_RS25760 PF00176 SNF2 family N-terminal domain JI729_RS25760 PF00271 Helicase conserved C-terminal domain JI729_RS25790 PF04545 Sigma-70, region 4 JI729_RS25790 PF04542 Sigma-70 region 2 JI729_RS25820 PF02687 FtsX-like permease family JI729_RS25820 PF12704 MacB-like periplasmic core domain JI729_RS25825 PF00005 ABC transporter JI729_RS25845 PF07690 Major Facilitator Superfamily JI729_RS25860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS25860 PF00989 PAS fold JI729_RS25860 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS25860 PF16736 Single Cache-like JI729_RS25865 PF00072 Response regulator receiver domain JI729_RS25865 PF00486 Transcriptional regulatory protein, C terminal JI729_RS25870 PF16363 GDP-mannose 4,6 dehydratase JI729_RS25875 PF16363 GDP-mannose 4,6 dehydratase JI729_RS25885 PF03816 Cell envelope-related transcriptional attenuator domain JI729_RS25895 PF04230 Polysaccharide pyruvyl transferase JI729_RS25900 PF00535 Glycosyl transferase family 2 JI729_RS25905 PF13439 Glycosyltransferase Family 4 JI729_RS25905 PF00534 Glycosyl transferases group 1 JI729_RS25915 PF02397 Bacterial sugar transferase JI729_RS25920 PF00535 Glycosyl transferase family 2 JI729_RS25925 PF00483 Nucleotidyl transferase JI729_RS25935 PF13614 AAA domain JI729_RS25940 PF13807 G-rich domain on putative tyrosine kinase JI729_RS25940 PF02706 Chain length determinant protein JI729_RS25945 PF13614 AAA domain JI729_RS25950 PF07977 FabA-like domain JI729_RS25960 PF12116 Stage III sporulation protein D JI729_RS25970 PF01551 Peptidase family M23 JI729_RS25980 PF00005 ABC transporter JI729_RS25985 PF04397 LytTr DNA-binding domain JI729_RS25985 PF00072 Response regulator receiver domain JI729_RS25990 PF08486 Stage II sporulation protein JI729_RS25995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JI729_RS26005 PF06612 Protein of unknown function (DUF1146) JI729_RS26010 PF00361 Proton-conducting membrane transporter JI729_RS26015 PF00361 Proton-conducting membrane transporter JI729_RS26020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JI729_RS26020 PF00361 Proton-conducting membrane transporter JI729_RS26020 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus JI729_RS26025 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JI729_RS26030 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JI729_RS26040 PF00146 NADH dehydrogenase JI729_RS26045 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JI729_RS26050 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JI729_RS26055 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JI729_RS26060 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JI729_RS26065 PF00990 Diguanylate cyclase, GGDEF domain JI729_RS26065 PF00563 EAL domain JI729_RS26065 PF03707 Bacterial signalling protein N terminal repeat JI729_RS26080 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JI729_RS26080 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JI729_RS26085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JI729_RS26085 PF02874 ATP synthase alpha/beta family, beta-barrel domain JI729_RS26090 PF00231 ATP synthase JI729_RS26095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JI729_RS26095 PF00306 ATP synthase alpha/beta chain, C terminal domain JI729_RS26095 PF02874 ATP synthase alpha/beta family, beta-barrel domain JI729_RS26100 PF00213 ATP synthase delta (OSCP) subunit JI729_RS26105 PF00430 ATP synthase B/B' CF(0) JI729_RS26110 PF00137 ATP synthase subunit C JI729_RS26115 PF00119 ATP synthase A chain JI729_RS26120 PF03899 ATP synthase I chain JI729_RS26140 PF00464 Serine hydroxymethyltransferase JI729_RS26145 PF04260 Protein of unknown function (DUF436) JI729_RS26150 PF02502 Ribose/Galactose Isomerase JI729_RS26155 PF01451 Low molecular weight phosphotyrosine protein phosphatase JI729_RS26160 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JI729_RS26165 PF07681 DoxX JI729_RS26170 PF01613 Flavin reductase like domain JI729_RS26180 PF02659 Putative manganese efflux pump JI729_RS26185 PF03481 Putative GTP-binding controlling metal-binding JI729_RS26185 PF01300 Telomere recombination JI729_RS26195 PF09551 Stage II sporulation protein R (spore_II_R) JI729_RS26200 PF13847 Methyltransferase domain JI729_RS26200 PF17827 PrmC N-terminal domain JI729_RS26205 PF03462 PCRF domain JI729_RS26205 PF00472 RF-1 domain JI729_RS26210 PF00265 Thymidine kinase JI729_RS26215 PF01197 Ribosomal protein L31 JI729_RS26220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JI729_RS26220 PF07498 Rho termination factor, N-terminal domain JI729_RS26220 PF07497 Rho termination factor, RNA-binding domain JI729_RS26225 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JI729_RS26230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JI729_RS26235 PF01116 Fructose-bisphosphate aldolase class-II JI729_RS26240 PF00072 Response regulator receiver domain JI729_RS26245 PF10740 Domain of unknown function (DUF2529) JI729_RS26250 PF00117 Glutamine amidotransferase class-I JI729_RS26250 PF06418 CTP synthase N-terminus JI729_RS26255 PF05066 HB1, ASXL, restriction endonuclease HTH domain JI729_RS26265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JI729_RS26265 PF02770 Acyl-CoA dehydrogenase, middle domain JI729_RS26265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JI729_RS26270 PF02770 Acyl-CoA dehydrogenase, middle domain JI729_RS26270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JI729_RS26270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JI729_RS26275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JI729_RS26275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JI729_RS26280 PF00108 Thiolase, N-terminal domain JI729_RS26280 PF02803 Thiolase, C-terminal domain JI729_RS26285 PF02754 Cysteine-rich domain JI729_RS26285 PF13183 4Fe-4S dicluster domain JI729_RS26290 PF13091 PLD-like domain JI729_RS26295 PF03851 UV-endonuclease UvdE JI729_RS26300 PF00990 Diguanylate cyclase, GGDEF domain JI729_RS26300 PF03707 Bacterial signalling protein N terminal repeat JI729_RS26300 PF00563 EAL domain JI729_RS26315 PF02868 Thermolysin metallopeptidase, alpha-helical domain JI729_RS26315 PF01447 Thermolysin metallopeptidase, catalytic domain JI729_RS26315 PF03413 Peptidase propeptide and YPEB domain JI729_RS26315 PF07504 Fungalysin/Thermolysin Propeptide Motif JI729_RS26320 PF00072 Response regulator receiver domain JI729_RS26320 PF00196 Bacterial regulatory proteins, luxR family JI729_RS26325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS26325 PF07730 Histidine kinase JI729_RS26335 PF00005 ABC transporter JI729_RS26340 PF00557 Metallopeptidase family M24 JI729_RS26350 PF02225 PA domain JI729_RS26350 PF04389 Peptidase family M28 JI729_RS26370 PF04542 Sigma-70 region 2 JI729_RS26370 PF08281 Sigma-70, region 4 JI729_RS26375 PF05746 DALR anticodon binding domain JI729_RS26375 PF00750 tRNA synthetases class I (R) JI729_RS26375 PF03485 Arginyl tRNA synthetase N terminal domain JI729_RS26380 PF09148 Domain of unknown function (DUF1934) JI729_RS26385 PF02016 LD-carboxypeptidase N-terminal domain JI729_RS26385 PF17676 LD-carboxypeptidase C-terminal domain JI729_RS26400 PF00491 Arginase family JI729_RS26405 PF17284 Spermidine synthase tetramerisation domain JI729_RS26410 PF07690 Major Facilitator Superfamily JI729_RS26415 PF13411 MerR HTH family regulatory protein JI729_RS26420 PF03009 Glycerophosphoryl diester phosphodiesterase family JI729_RS26425 PF00905 Penicillin binding protein transpeptidase domain JI729_RS26425 PF00912 Transglycosylase JI729_RS26430 PF08741 YwhD family JI729_RS26435 PF02163 Peptidase family M50 JI729_RS26440 PF01361 Tautomerase enzyme JI729_RS26445 PF01966 HD domain JI729_RS26450 PF01497 Periplasmic binding protein JI729_RS26455 PF00005 ABC transporter JI729_RS26460 PF01032 FecCD transport family JI729_RS26465 PF01032 FecCD transport family JI729_RS26470 PF07293 Protein of unknown function (DUF1450) JI729_RS26480 PF03099 Biotin/lipoate A/B protein ligase family JI729_RS26485 PF01515 Phosphate acetyl/butaryl transferase JI729_RS26490 PF06778 Chlorite dismutase JI729_RS26495 PF07943 Penicillin-binding protein 5, C-terminal domain JI729_RS26495 PF00768 D-alanyl-D-alanine carboxypeptidase JI729_RS26500 PF07486 Cell Wall Hydrolase JI729_RS26505 PF09671 Spore coat protein (Spore_GerQ) JI729_RS26510 PF04241 Protein of unknown function (DUF423) JI729_RS26520 PF07885 Ion channel JI729_RS26520 PF02254 TrkA-N domain JI729_RS26525 PF00860 Permease family JI729_RS26535 PF12823 Domain of unknown function (DUF3817) JI729_RS26540 PF03167 Uracil DNA glycosylase superfamily JI729_RS26545 PF12679 ABC-2 family transporter protein JI729_RS26550 PF00005 ABC transporter JI729_RS26555 PF13472 GDSL-like Lipase/Acylhydrolase family JI729_RS26560 PF00356 Bacterial regulatory proteins, lacI family JI729_RS26560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JI729_RS26570 PF03447 Homoserine dehydrogenase, NAD binding domain JI729_RS26570 PF00742 Homoserine dehydrogenase JI729_RS26570 PF01842 ACT domain JI729_RS26575 PF04204 Homoserine O-succinyltransferase JI729_RS26580 PF01053 Cys/Met metabolism PLP-dependent enzyme JI729_RS26590 PF13419 Haloacid dehalogenase-like hydrolase JI729_RS26595 PF00027 Cyclic nucleotide-binding domain JI729_RS26600 PF02525 Flavodoxin-like fold JI729_RS26605 PF00072 Response regulator receiver domain JI729_RS26605 PF00196 Bacterial regulatory proteins, luxR family JI729_RS26610 PF07730 Histidine kinase JI729_RS26610 PF13185 GAF domain JI729_RS26615 PF08543 Phosphomethylpyrimidine kinase JI729_RS26620 PF07694 5TMR of 5TMR-LYT JI729_RS26620 PF00990 Diguanylate cyclase, GGDEF domain JI729_RS26625 PF04328 Selenoprotein, putative JI729_RS26630 PF02554 Carbon starvation protein CstA JI729_RS26630 PF13722 5TM C-terminal transporter carbon starvation CstA JI729_RS26635 PF04397 LytTr DNA-binding domain JI729_RS26635 PF00072 Response regulator receiver domain JI729_RS26640 PF07690 Major Facilitator Superfamily JI729_RS26645 PF03808 Glycosyl transferase WecB/TagA/CpsF family JI729_RS26650 PF13439 Glycosyltransferase Family 4 JI729_RS26650 PF00534 Glycosyl transferases group 1 JI729_RS26660 PF03458 UPF0126 domain JI729_RS26665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JI729_RS26675 PF03061 Thioesterase superfamily JI729_RS26680 PF00535 Glycosyl transferase family 2 JI729_RS26690 PF00535 Glycosyl transferase family 2 JI729_RS26705 PF00535 Glycosyl transferase family 2 JI729_RS26710 PF00005 ABC transporter JI729_RS26710 PF12848 ABC transporter JI729_RS26715 PF00440 Bacterial regulatory proteins, tetR family JI729_RS26720 PF00873 AcrB/AcrD/AcrF family JI729_RS26725 PF01625 Peptide methionine sulfoxide reductase JI729_RS26725 PF01641 SelR domain JI729_RS26730 PF01594 AI-2E family transporter JI729_RS26735 PF04172 LrgB-like family JI729_RS26740 PF03788 LrgA family JI729_RS26745 PF00072 Response regulator receiver domain JI729_RS26745 PF04397 LytTr DNA-binding domain JI729_RS26750 PF13492 GAF domain JI729_RS26750 PF07694 5TMR of 5TMR-LYT JI729_RS26750 PF06580 Histidine kinase JI729_RS26750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS26755 PF07690 Major Facilitator Superfamily JI729_RS26760 PF02028 BCCT, betaine/carnitine/choline family transporter JI729_RS26765 PF02898 Nitric oxide synthase, oxygenase domain JI729_RS26770 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JI729_RS26770 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JI729_RS26780 PF02293 AmiS/UreI family transporter JI729_RS26785 PF16363 GDP-mannose 4,6 dehydratase JI729_RS26790 PF03006 Haemolysin-III related JI729_RS26800 PF00271 Helicase conserved C-terminal domain JI729_RS26800 PF00270 DEAD/DEAH box helicase JI729_RS26800 PF03880 DbpA RNA binding domain JI729_RS26805 PF00478 IMP dehydrogenase / GMP reductase domain JI729_RS26825 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS26825 PF00989 PAS fold JI729_RS26825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS26825 PF13426 PAS domain JI729_RS26825 PF13188 PAS domain JI729_RS26830 PF02590 Predicted SPOUT methyltransferase JI729_RS26840 PF13180 PDZ domain JI729_RS26845 PF00753 Metallo-beta-lactamase superfamily JI729_RS26850 PF09648 YycH protein JI729_RS26860 PF00672 HAMP domain JI729_RS26860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JI729_RS26860 PF00512 His Kinase A (phospho-acceptor) domain JI729_RS26860 PF13426 PAS domain JI729_RS26865 PF00072 Response regulator receiver domain JI729_RS26865 PF00486 Transcriptional regulatory protein, C terminal JI729_RS26890 PF00709 Adenylosuccinate synthetase JI729_RS26895 PF00772 DnaB-like helicase N terminal domain JI729_RS26895 PF03796 DnaB-like helicase C terminal domain JI729_RS26900 PF01281 Ribosomal protein L9, N-terminal domain JI729_RS26900 PF03948 Ribosomal protein L9, C-terminal domain JI729_RS26905 PF01368 DHH family JI729_RS26905 PF02272 DHHA1 domain JI729_RS26910 PF09991 Predicted membrane protein (DUF2232) JI729_RS26915 PF01084 Ribosomal protein S18 JI729_RS26920 PF00436 Single-strand binding protein family JI729_RS26925 PF01250 Ribosomal protein S6 JI729_RS26930 PF01926 50S ribosome-binding GTPase JI729_RS26930 PF06071 Protein of unknown function (DUF933) JI729_RS26935 PF06107 Bacterial protein of unknown function (DUF951) JI729_RS26940 PF00924 Mechanosensitive ion channel JI729_RS26945 PF06866 Protein of unknown function (DUF1256) JI729_RS26950 PF02195 ParB-like nuclease domain JI729_RS26950 PF17762 HTH domain found in ParB protein JI729_RS26955 PF13614 AAA domain JI729_RS26960 PF17762 HTH domain found in ParB protein JI729_RS26960 PF02195 ParB-like nuclease domain JI729_RS26965 PF02527 rRNA small subunit methyltransferase G JI729_RS26970 PF13932 GidA associated domain JI729_RS26970 PF01134 Glucose inhibited division protein A JI729_RS26975 PF12631 MnmE helical domain JI729_RS26975 PF01926 50S ribosome-binding GTPase JI729_RS26975 PF10396 GTP-binding protein TrmE N-terminus JI729_RS26980 PF14804 Jag N-terminus JI729_RS26980 PF01424 R3H domain JI729_RS26985 PF02096 60Kd inner membrane protein JI729_RS26990 PF00825 Ribonuclease P JI729_RS26995 PF00468 Ribosomal protein L34