QR42_RS00005 SM00382 ATPases associated with a variety of cellular activities QR42_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain QR42_RS00010 SM00480 DNA polymerase III beta subunit QR42_RS00030 SM00387 Histidine kinase-like ATPases QR42_RS00030 SM00433 TopoisomeraseII QR42_RS00035 SM00434 DNA Topoisomerase IV QR42_RS00070 SM00116 Domain in cystathionine beta-synthase and other proteins. QR42_RS00070 SM01240 QR42_RS00070 QR42_RS00075 SM00936 Penicillin-binding protein 5, C-terminal domain QR42_RS00080 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS00100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS00120 SM00257 Lysin motif QR42_RS00120 SM00636 QR42_RS00120 QR42_RS00135 SM00382 ATPases associated with a variety of cellular activities QR42_RS00145 SM00493 QR42_RS00145 QR42_RS00240 SM00465 GIY-YIG type nucleases (URI domain) QR42_RS00250 SM00966 SpoVT / AbrB like domain QR42_RS00265 SM01208 QR42_RS00265 QR42_RS00270 SM00493 QR42_RS00270 QR42_RS00275 SM00650 Ribosomal RNA adenine dimethylases QR42_RS00320 SM01400 QR42_RS00320 QR42_RS00340 SM00487 DEAD-like helicases superfamily QR42_RS00340 SM00490 helicase superfamily c-terminal domain QR42_RS00340 SM00982 QR42_RS00340 QR42_RS00340 SM01058 CarD-like/TRCF domain QR42_RS00345 SM00966 SpoVT / AbrB like domain QR42_RS00360 SM00363 S4 RNA-binding domain QR42_RS00380 SM00316 Ribosomal protein S1-like RNA-binding domain QR42_RS00395 SM00331 Sigma factor PP2C-like phosphatases QR42_RS00395 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain QR42_RS00405 SM00220 Serine/Threonine protein kinases, catalytic domain QR42_RS00410 SM00977 TilS substrate C-terminal domain QR42_RS00420 SM00382 ATPases associated with a variety of cellular activities QR42_RS00465 SM00905 Dihydroneopterin aldolase QR42_RS00475 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS00580 SM00382 ATPases associated with a variety of cellular activities QR42_RS00580 SM01086 C-terminal, D2-small domain, of ClpB protein QR42_RS00585 SM00382 ATPases associated with a variety of cellular activities QR42_RS00595 SM00670 Large family of predicted nucleotide-binding domains QR42_RS00620 SM00840 QR42_RS00620 QR42_RS00625 SM00535 Ribonuclease III family QR42_RS00630 SM00967 RNA 2'-O ribose methyltransferase substrate binding QR42_RS00650 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. QR42_RS00650 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. QR42_RS00655 SM00649 Ribosomal protein L11/L12 QR42_RS00685 SM00663 RNA polymerase I subunit A N-terminus QR42_RS00705 SM00838 Elongation factor G C-terminus QR42_RS00705 SM00889 Elongation factor G, domain IV QR42_RS00720 SM01403 QR42_RS00720 QR42_RS00740 SM01382 QR42_RS00740 QR42_RS00740 SM01383 QR42_RS00740 QR42_RS00755 SM00322 K homology RNA-binding domain QR42_RS00775 SM01374 QR42_RS00775 QR42_RS00780 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. QR42_RS00840 SM00316 Ribosomal protein S1-like RNA-binding domain QR42_RS00860 SM00662 RNA polymerases D QR42_RS00870 SM00382 ATPases associated with a variety of cellular activities QR42_RS00875 SM00382 ATPases associated with a variety of cellular activities QR42_RS00925 SM00646 QR42_RS00925 QR42_RS00940 SM01251 QR42_RS00940 QR42_RS01090 SM00382 ATPases associated with a variety of cellular activities QR42_RS01105 SM00382 ATPases associated with a variety of cellular activities QR42_RS01135 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS01140 SM00382 ATPases associated with a variety of cellular activities QR42_RS01150 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS01205 SM00825 Beta-ketoacyl synthase QR42_RS01210 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS01235 SM00450 Rhodanese Homology Domain QR42_RS01240 SM00450 Rhodanese Homology Domain QR42_RS01245 SM00450 Rhodanese Homology Domain QR42_RS01245 SM00849 Metallo-beta-lactamase superfamily QR42_RS01260 SM00946 Prolyl-tRNA synthetase, C-terminal QR42_RS01275 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS01325 SM00450 Rhodanese Homology Domain QR42_RS01340 SM01061 CAT RNA binding domain QR42_RS01375 SM00872 Alpha mannosidase, middle domain QR42_RS01475 SM00829 Enoylreductase QR42_RS01480 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS01515 SM00387 Histidine kinase-like ATPases QR42_RS01520 SM00448 cheY-homologous receiver domain QR42_RS01535 SM00421 helix_turn_helix, Lux Regulon QR42_RS01535 SM00448 cheY-homologous receiver domain QR42_RS01540 SM00387 Histidine kinase-like ATPases QR42_RS01555 SM00387 Histidine kinase-like ATPases QR42_RS01560 SM00448 cheY-homologous receiver domain QR42_RS01560 SM00850 LytTr DNA-binding domain QR42_RS01565 SM00382 ATPases associated with a variety of cellular activities QR42_RS01660 SM00116 Domain in cystathionine beta-synthase and other proteins. QR42_RS01660 SM00382 ATPases associated with a variety of cellular activities QR42_RS01705 SM00354 helix_turn _helix lactose operon repressor QR42_RS01800 SM00346 helix_turn_helix isocitrate lyase regulation QR42_RS01810 SM01130 QR42_RS01810 QR42_RS01815 SM00354 helix_turn _helix lactose operon repressor QR42_RS01880 SM00062 Bacterial periplasmic substrate-binding proteins QR42_RS01895 SM00344 helix_turn_helix ASNC type QR42_RS01910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS01910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS01940 SM00382 ATPases associated with a variety of cellular activities QR42_RS01955 SM00823 Phosphopantetheine attachment site QR42_RS01960 SM00823 Phosphopantetheine attachment site QR42_RS01965 SM00823 Phosphopantetheine attachment site QR42_RS01970 SM00822 QR42_RS01970 QR42_RS01975 SM00822 QR42_RS01975 QR42_RS01980 SM00824 Thioesterase QR42_RS01990 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS02025 SM00382 ATPases associated with a variety of cellular activities QR42_RS02035 SM00062 Bacterial periplasmic substrate-binding proteins QR42_RS02060 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS02060 SM00895 QR42_RS02060 QR42_RS02085 SM00710 Parallel beta-helix repeats QR42_RS02100 SM00062 Bacterial periplasmic substrate-binding proteins QR42_RS02100 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. QR42_RS02110 SM00382 ATPases associated with a variety of cellular activities QR42_RS02130 SM00448 cheY-homologous receiver domain QR42_RS02130 SM00862 Transcriptional regulatory protein, C terminal QR42_RS02135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS02135 SM00387 Histidine kinase-like ATPases QR42_RS02135 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS02140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. QR42_RS02165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor QR42_RS02170 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS02220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS02220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS02220 SM01049 QR42_RS02220 QR42_RS02245 SM00894 Excalibur calcium-binding domain QR42_RS02270 SM00796 Allophanate hydrolase subunit 1 QR42_RS02275 SM00797 Allophanate hydrolase subunit 2 QR42_RS02280 SM00346 helix_turn_helix isocitrate lyase regulation QR42_RS02320 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor QR42_RS02330 SM00829 Enoylreductase QR42_RS02405 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS02405 SM00895 QR42_RS02405 QR42_RS02410 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS02420 SM01329 QR42_RS02420 QR42_RS02425 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain QR42_RS02425 SM00437 Bacterial DNA topoisomerase I DNA-binding domain QR42_RS02425 SM00493 QR42_RS02425 QR42_RS02435 SM00267 diguanylate cyclase QR42_RS02510 SM00091 PAS domain QR42_RS02510 SM00387 Histidine kinase-like ATPases QR42_RS02515 SM00448 cheY-homologous receiver domain QR42_RS02535 SM00382 ATPases associated with a variety of cellular activities QR42_RS02575 SM00487 DEAD-like helicases superfamily QR42_RS02575 SM00490 helicase superfamily c-terminal domain QR42_RS02605 SM01005 Alanine racemase, C-terminal domain QR42_RS02635 SM00331 Sigma factor PP2C-like phosphatases QR42_RS02655 SM00331 Sigma factor PP2C-like phosphatases QR42_RS02655 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain QR42_RS02660 SM00316 Ribosomal protein S1-like RNA-binding domain QR42_RS02660 SM00732 Likely ribonuclease with RNase H fold. QR42_RS02665 SM00731 SprT homologues. QR42_RS02675 SM00861 Transketolase, pyrimidine binding domain QR42_RS02690 SM00382 ATPases associated with a variety of cellular activities QR42_RS02735 SM00357 Cold shock protein domain QR42_RS02740 SM01058 CarD-like/TRCF domain QR42_RS02745 SM00829 Enoylreductase QR42_RS02750 SM00422 helix_turn_helix, mercury resistance QR42_RS02805 SM00870 QR42_RS02805 QR42_RS02815 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS02870 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS02890 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS03000 SM00382 ATPases associated with a variety of cellular activities QR42_RS03010 SM00881 CoA binding domain QR42_RS03040 SM00883 Chaperonin 10 Kd subunit QR42_RS03125 SM00460 Transglutaminase/protease-like homologues QR42_RS03140 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS03145 SM00917 LeuA allosteric (dimerisation) domain QR42_RS03220 SM01001 AIR carboxylase QR42_RS03230 SM00998 Adenylosuccinate lyase C-terminus QR42_RS03245 SM01211 QR42_RS03245 QR42_RS03270 SM00798 AICARFT/IMPCHase bienzyme QR42_RS03270 SM00851 MGS-like domain QR42_RS03275 SM01209 QR42_RS03275 QR42_RS03275 SM01210 QR42_RS03275 QR42_RS03300 SM00882 Coenzyme A transferase QR42_RS03305 SM00882 Coenzyme A transferase QR42_RS03355 SM00278 Helix-hairpin-helix DNA-binding motif class 1 QR42_RS03355 SM00292 breast cancer carboxy-terminal domain QR42_RS03355 SM00532 Ligase N family QR42_RS03390 SM00845 GatB domain QR42_RS03410 SM00046 Diacylglycerol kinase catalytic domain (presumed) QR42_RS03425 SM00860 SMI1 / KNR4 family QR42_RS03580 SM00028 Tetratricopeptide repeats QR42_RS03585 SM00382 ATPases associated with a variety of cellular activities QR42_RS03595 SM00422 helix_turn_helix, mercury resistance QR42_RS03605 SM00382 ATPases associated with a variety of cellular activities QR42_RS03610 SM00487 DEAD-like helicases superfamily QR42_RS03610 SM00490 helicase superfamily c-terminal domain QR42_RS03625 SM00829 Enoylreductase QR42_RS03655 SM00320 WD40 repeats QR42_RS03675 SM00387 Histidine kinase-like ATPases QR42_RS03680 SM00448 cheY-homologous receiver domain QR42_RS03695 SM00631 QR42_RS03695 QR42_RS03765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS03765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS03780 SM00642 Alpha-amylase domain QR42_RS03785 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS03785 SM00866 QR42_RS03785 QR42_RS03815 SM00226 Low molecular weight phosphatase family QR42_RS03890 SM00478 endonuclease III QR42_RS03910 SM00422 helix_turn_helix, mercury resistance QR42_RS03910 SM00871 Bacterial transcription activator, effector binding domain QR42_RS03925 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain QR42_RS04005 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS04015 SM00382 ATPases associated with a variety of cellular activities QR42_RS04040 SM00829 Enoylreductase QR42_RS04055 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS04075 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS04130 SM00835 Cupin QR42_RS04150 SM00478 endonuclease III QR42_RS04180 SM00382 ATPases associated with a variety of cellular activities QR42_RS04185 SM00382 ATPases associated with a variety of cellular activities QR42_RS04190 SM00382 ATPases associated with a variety of cellular activities QR42_RS04350 SM00855 Phosphoglycerate mutase family QR42_RS04395 SM00382 ATPases associated with a variety of cellular activities QR42_RS04400 SM00062 Bacterial periplasmic substrate-binding proteins QR42_RS04420 SM00382 ATPases associated with a variety of cellular activities QR42_RS04455 SM00567 E-Z type HEAT repeats QR42_RS04475 SM00763 PrkA AAA domain QR42_RS04505 SM00357 Cold shock protein domain QR42_RS04510 SM00267 diguanylate cyclase QR42_RS04540 SM00138 Methyltransferase, chemotaxis proteins QR42_RS04540 SM00387 Histidine kinase-like ATPases QR42_RS04540 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS04545 SM00318 Staphylococcal nuclease homologues QR42_RS04620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. QR42_RS04625 SM00421 helix_turn_helix, Lux Regulon QR42_RS04625 SM00448 cheY-homologous receiver domain QR42_RS04645 SM01060 QR42_RS04645 QR42_RS04665 SM00098 Alkaline phosphatase homologues QR42_RS04670 SM00257 Lysin motif QR42_RS04695 SM00563 Phosphate acyltransferases QR42_RS04700 SM01091 Transporter associated domain QR42_RS04710 SM01091 Transporter associated domain QR42_RS04780 SM00382 ATPases associated with a variety of cellular activities QR42_RS04785 SM00382 ATPases associated with a variety of cellular activities QR42_RS04805 SM00382 ATPases associated with a variety of cellular activities QR42_RS04845 SM00729 Elongator protein 3, MiaB family, Radical SAM QR42_RS04895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QR42_RS04930 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS04960 SM00382 ATPases associated with a variety of cellular activities QR42_RS05030 SM00849 Metallo-beta-lactamase superfamily QR42_RS05060 SM00855 Phosphoglycerate mutase family QR42_RS05065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS05080 SM00914 QR42_RS05080 QR42_RS05095 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS05260 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS05300 SM01006 Siderophore biosynthesis protein domain QR42_RS05320 SM01018 B12 binding domain QR42_RS05335 SM00316 Ribosomal protein S1-like RNA-binding domain QR42_RS05345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS05345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS05400 SM00859 Semialdehyde dehydrogenase, NAD binding domain QR42_RS05420 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain QR42_RS05425 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain QR42_RS05480 SM00825 Beta-ketoacyl synthase QR42_RS05490 SM00382 ATPases associated with a variety of cellular activities QR42_RS05495 SM00382 ATPases associated with a variety of cellular activities QR42_RS05540 SM00382 ATPases associated with a variety of cellular activities QR42_RS05545 SM00382 ATPases associated with a variety of cellular activities QR42_RS05575 SM00155 Phospholipase D. Active site motifs. QR42_RS05610 SM01118 QR42_RS05610 QR42_RS05620 SM00954 Region found in RelA / SpoT proteins QR42_RS05780 SM00829 Enoylreductase QR42_RS05785 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS05795 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS05840 SM01059 Chloramphenicol acetyltransferase QR42_RS05845 SM00028 Tetratricopeptide repeats QR42_RS05865 SM00860 SMI1 / KNR4 family QR42_RS05905 SM00028 Tetratricopeptide repeats QR42_RS05915 SM00871 Bacterial transcription activator, effector binding domain QR42_RS05930 SM01005 Alanine racemase, C-terminal domain QR42_RS05935 SM00829 Enoylreductase QR42_RS05945 SM00612 QR42_RS05945 QR42_RS05970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS05990 SM00257 Lysin motif QR42_RS05990 SM00644 QR42_RS05990 QR42_RS06015 SM01022 QR42_RS06015 QR42_RS06040 SM00382 ATPases associated with a variety of cellular activities QR42_RS06065 SM00829 Enoylreductase QR42_RS06075 SM00861 Transketolase, pyrimidine binding domain QR42_RS06080 SM01059 Chloramphenicol acetyltransferase QR42_RS06120 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QR42_RS06145 SM00382 ATPases associated with a variety of cellular activities QR42_RS06160 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain QR42_RS06170 SM00382 ATPases associated with a variety of cellular activities QR42_RS06205 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS06230 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase QR42_RS06240 SM00028 Tetratricopeptide repeats QR42_RS06255 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS06285 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS06290 SM00448 cheY-homologous receiver domain QR42_RS06290 SM00862 Transcriptional regulatory protein, C terminal QR42_RS06295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS06295 SM00387 Histidine kinase-like ATPases QR42_RS06295 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS06310 SM00116 Domain in cystathionine beta-synthase and other proteins. QR42_RS06310 SM00924 MgtE intracellular N domain QR42_RS06330 SM00422 helix_turn_helix, mercury resistance QR42_RS06340 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS06345 SM00052 Putative diguanylate phosphodiesterase QR42_RS06345 SM00267 diguanylate cyclase QR42_RS06400 SM00091 PAS domain QR42_RS06400 SM00387 Histidine kinase-like ATPases QR42_RS06400 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS06435 SM01007 Class II Aldolase and Adducin N-terminal domain QR42_RS06450 SM00387 Histidine kinase-like ATPases QR42_RS06450 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS06455 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS06470 SM00382 ATPases associated with a variety of cellular activities QR42_RS06470 SM01086 C-terminal, D2-small domain, of ClpB protein QR42_RS06550 SM00354 helix_turn _helix lactose operon repressor QR42_RS06555 SM01061 CAT RNA binding domain QR42_RS06585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS06585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS06610 SM00091 PAS domain QR42_RS06610 SM00387 Histidine kinase-like ATPases QR42_RS06610 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS06635 SM00260 Two component signalling adaptor domain QR42_RS06635 SM00448 cheY-homologous receiver domain QR42_RS06645 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS06665 SM00257 Lysin motif QR42_RS06680 SM00052 Putative diguanylate phosphodiesterase QR42_RS06780 SM00852 Probable molybdopterin binding domain QR42_RS06815 SM00382 ATPases associated with a variety of cellular activities QR42_RS06825 SM00420 helix_turn_helix, Deoxyribose operon repressor QR42_RS06825 SM01134 QR42_RS06825 QR42_RS06850 SM00382 ATPases associated with a variety of cellular activities QR42_RS06865 SM00966 SpoVT / AbrB like domain QR42_RS06870 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) QR42_RS06870 SM00091 PAS domain QR42_RS06870 SM00387 Histidine kinase-like ATPases QR42_RS06870 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS06890 SM00849 Metallo-beta-lactamase superfamily QR42_RS06925 SM00861 Transketolase, pyrimidine binding domain QR42_RS07005 SM00838 Elongation factor G C-terminus QR42_RS07025 SM00670 Large family of predicted nucleotide-binding domains QR42_RS07050 SM00878 Biotin carboxylase C-terminal domain QR42_RS07100 SM00116 Domain in cystathionine beta-synthase and other proteins. QR42_RS07175 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains QR42_RS07210 SM00740 QR42_RS07210 QR42_RS07215 SM00740 QR42_RS07215 QR42_RS07270 SM00842 Cell division protein FtsA QR42_RS07275 SM00864 Tubulin/FtsZ family, GTPase domain QR42_RS07275 SM00865 Tubulin/FtsZ family, C-terminal domain QR42_RS07305 SM00858 QR42_RS07305 QR42_RS07330 SM00382 ATPases associated with a variety of cellular activities QR42_RS07360 SM00363 S4 RNA-binding domain QR42_RS07385 SM00363 S4 RNA-binding domain QR42_RS07410 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain QR42_RS07415 SM00851 MGS-like domain QR42_RS07415 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain QR42_RS07415 SM01209 QR42_RS07415 QR42_RS07430 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family QR42_RS07480 SM00831 Cation transporter/ATPase, N-terminus QR42_RS07495 SM00072 Guanylate kinase homologues. QR42_RS07500 SM01409 QR42_RS07500 QR42_RS07510 SM00487 DEAD-like helicases superfamily QR42_RS07510 SM00490 helicase superfamily c-terminal domain QR42_RS07535 SM00331 Sigma factor PP2C-like phosphatases QR42_RS07535 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain QR42_RS07540 SM00220 Serine/Threonine protein kinases, catalytic domain QR42_RS07540 SM00740 QR42_RS07540 QR42_RS07555 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain QR42_RS07575 SM01120 QR42_RS07575 QR42_RS07575 SM01121 QR42_RS07575 QR42_RS07590 SM00487 DEAD-like helicases superfamily QR42_RS07590 SM00490 helicase superfamily c-terminal domain QR42_RS07605 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. QR42_RS07610 SM00822 QR42_RS07610 QR42_RS07620 SM00358 Double-stranded RNA binding motif QR42_RS07620 SM00535 Ribonuclease III family QR42_RS07625 SM00968 SMC proteins Flexible Hinge Domain QR42_RS07630 SM00382 ATPases associated with a variety of cellular activities QR42_RS07630 SM00962 SRP54-type protein, GTPase domain QR42_RS07630 SM00963 SRP54-type protein, helical bundle domain QR42_RS07640 SM00382 ATPases associated with a variety of cellular activities QR42_RS07640 SM00962 SRP54-type protein, GTPase domain QR42_RS07640 SM00963 SRP54-type protein, helical bundle domain QR42_RS07700 SM00881 CoA binding domain QR42_RS07710 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain QR42_RS07710 SM00437 Bacterial DNA topoisomerase I DNA-binding domain QR42_RS07710 SM00493 QR42_RS07710 QR42_RS07730 SM00382 ATPases associated with a variety of cellular activities QR42_RS07730 SM01086 C-terminal, D2-small domain, of ClpB protein QR42_RS07770 SM00382 ATPases associated with a variety of cellular activities QR42_RS07820 SM00448 cheY-homologous receiver domain QR42_RS07855 SM00962 SRP54-type protein, GTPase domain QR42_RS07865 SM00448 cheY-homologous receiver domain QR42_RS07870 SM00073 Histidine Phosphotransfer domain QR42_RS07870 SM00260 Two component signalling adaptor domain QR42_RS07870 SM00387 Histidine kinase-like ATPases QR42_RS07870 SM01231 QR42_RS07870 QR42_RS07875 SM00260 Two component signalling adaptor domain QR42_RS07935 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QR42_RS07945 SM00479 QR42_RS07945 QR42_RS07945 SM00481 DNA polymerase alpha chain like domain QR42_RS07950 SM01067 Cellulose binding domain QR42_RS07960 SM00633 Glycosyl hydrolase family 10 QR42_RS07980 SM00382 ATPases associated with a variety of cellular activities QR42_RS08030 SM00316 Ribosomal protein S1-like RNA-binding domain QR42_RS08030 SM00322 K homology RNA-binding domain QR42_RS08065 SM00904 Riboflavin kinase QR42_RS08070 SM01387 QR42_RS08070 QR42_RS08075 SM00316 Ribosomal protein S1-like RNA-binding domain QR42_RS08075 SM00322 K homology RNA-binding domain QR42_RS08110 SM00859 Semialdehyde dehydrogenase, NAD binding domain QR42_RS08120 SM01130 QR42_RS08120 QR42_RS08125 SM00849 Metallo-beta-lactamase superfamily QR42_RS08140 SM00382 ATPases associated with a variety of cellular activities QR42_RS08140 SM00843 QR42_RS08140 QR42_RS08145 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS08145 SM00866 QR42_RS08145 QR42_RS08170 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS08195 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS08205 SM00852 Probable molybdopterin binding domain QR42_RS08210 SM00382 ATPases associated with a variety of cellular activities QR42_RS08220 SM00322 K homology RNA-binding domain QR42_RS08220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QR42_RS08240 SM00829 Enoylreductase QR42_RS08250 SM00729 Elongator protein 3, MiaB family, Radical SAM QR42_RS08265 SM00533 DNA-binding domain of DNA mismatch repair MUTS family QR42_RS08265 SM00534 ATPase domain of DNA mismatch repair MUTS family QR42_RS08270 SM00853 MutL C terminal dimerisation domain QR42_RS08270 SM01340 QR42_RS08270 QR42_RS08290 SM01058 CarD-like/TRCF domain QR42_RS08300 SM00028 Tetratricopeptide repeats QR42_RS08380 SM00646 QR42_RS08380 QR42_RS08385 SM00382 ATPases associated with a variety of cellular activities QR42_RS08400 SM00422 helix_turn_helix, mercury resistance QR42_RS08405 SM01230 QR42_RS08405 QR42_RS08410 SM00891 ERCC4 domain QR42_RS08490 SM00506 Appr-1"-p processing enzyme QR42_RS08510 SM00028 Tetratricopeptide repeats QR42_RS08525 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen QR42_RS08595 SM00020 Trypsin-like serine protease QR42_RS08625 SM00257 Lysin motif QR42_RS08630 SM00857 Resolvase, N terminal domain QR42_RS08640 SM00861 Transketolase, pyrimidine binding domain QR42_RS08730 SM01207 QR42_RS08730 QR42_RS08735 SM00881 CoA binding domain QR42_RS08740 SM00387 Histidine kinase-like ATPases QR42_RS08740 SM00433 TopoisomeraseII QR42_RS08745 SM00434 DNA Topoisomerase IV QR42_RS08810 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS08855 SM00422 helix_turn_helix, mercury resistance QR42_RS08870 SM01061 CAT RNA binding domain QR42_RS08880 SM00387 Histidine kinase-like ATPases QR42_RS08880 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS08885 SM00448 cheY-homologous receiver domain QR42_RS08885 SM00862 Transcriptional regulatory protein, C terminal QR42_RS08895 SM00606 Cellulose Binding Domain Type IV QR42_RS08925 SM00354 helix_turn _helix lactose operon repressor QR42_RS08985 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS09020 SM00155 Phospholipase D. Active site motifs. QR42_RS09030 SM00100 Cyclic nucleotide-monophosphate binding domain QR42_RS09085 SM00878 Biotin carboxylase C-terminal domain QR42_RS09110 SM00420 helix_turn_helix, Deoxyribose operon repressor QR42_RS09110 SM01134 QR42_RS09110 QR42_RS09255 SM00382 ATPases associated with a variety of cellular activities QR42_RS09260 SM00382 ATPases associated with a variety of cellular activities QR42_RS09265 SM00422 helix_turn_helix, mercury resistance QR42_RS09280 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase QR42_RS09295 SM00926 Molybdopterin oxidoreductase Fe4S4 domain QR42_RS09360 SM00849 Metallo-beta-lactamase superfamily QR42_RS09365 SM00871 Bacterial transcription activator, effector binding domain QR42_RS09380 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor QR42_RS09420 SM00257 Lysin motif QR42_RS09425 SM00341 Helicase and RNase D C-terminal QR42_RS09425 SM00487 DEAD-like helicases superfamily QR42_RS09425 SM00490 helicase superfamily c-terminal domain QR42_RS09425 SM00956 QR42_RS09425 QR42_RS09475 SM00861 Transketolase, pyrimidine binding domain QR42_RS09480 SM00327 von Willebrand factor (vWF) type A domain QR42_RS09485 SM00382 ATPases associated with a variety of cellular activities QR42_RS09495 SM00257 Lysin motif QR42_RS09565 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QR42_RS09565 SM00245 tail specific protease QR42_RS09595 SM00014 Acid phosphatase homologues QR42_RS09620 SM00091 PAS domain QR42_RS09620 SM00382 ATPases associated with a variety of cellular activities QR42_RS09670 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS09770 SM00567 E-Z type HEAT repeats QR42_RS09770 SM00932 Scaffold protein Nfu/NifU N terminal QR42_RS09775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QR42_RS09805 SM00357 Cold shock protein domain QR42_RS09840 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs QR42_RS09840 SM00475 5'-3' exonuclease QR42_RS09885 SM00491 QR42_RS09885 QR42_RS09895 SM00981 QR42_RS09895 QR42_RS09915 SM00487 DEAD-like helicases superfamily QR42_RS09915 SM00490 helicase superfamily c-terminal domain QR42_RS09975 SM00478 endonuclease III QR42_RS09975 SM00525 QR42_RS09975 QR42_RS09995 SM00479 QR42_RS09995 QR42_RS09995 SM00491 QR42_RS09995 QR42_RS10035 SM00851 MGS-like domain QR42_RS10085 SM00914 QR42_RS10085 QR42_RS10090 SM00028 Tetratricopeptide repeats QR42_RS10155 SM00138 Methyltransferase, chemotaxis proteins QR42_RS10160 SM00562 QR42_RS10160 QR42_RS10190 SM00411 bacterial (prokaryotic) histone like domain QR42_RS10235 SM01240 QR42_RS10235 QR42_RS10240 SM00316 Ribosomal protein S1-like RNA-binding domain QR42_RS10280 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase QR42_RS10300 SM00257 Lysin motif QR42_RS10310 SM00487 DEAD-like helicases superfamily QR42_RS10310 SM00490 helicase superfamily c-terminal domain QR42_RS10335 SM00257 Lysin motif QR42_RS10350 SM00091 PAS domain QR42_RS10350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS10350 SM00387 Histidine kinase-like ATPases QR42_RS10350 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS10355 SM00448 cheY-homologous receiver domain QR42_RS10355 SM00862 Transcriptional regulatory protein, C terminal QR42_RS10375 SM00363 S4 RNA-binding domain QR42_RS10510 SM00387 Histidine kinase-like ATPases QR42_RS10520 SM00936 Penicillin-binding protein 5, C-terminal domain QR42_RS10600 SM00028 Tetratricopeptide repeats QR42_RS10665 SM00849 Metallo-beta-lactamase superfamily QR42_RS10700 SM00849 Metallo-beta-lactamase superfamily QR42_RS10710 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS10710 SM00866 QR42_RS10710 QR42_RS10745 SM01350 QR42_RS10745 QR42_RS10770 SM00260 Two component signalling adaptor domain QR42_RS10800 SM00382 ATPases associated with a variety of cellular activities QR42_RS10810 SM00062 Bacterial periplasmic substrate-binding proteins QR42_RS10810 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. QR42_RS10820 SM00046 Diacylglycerol kinase catalytic domain (presumed) QR42_RS10835 SM00861 Transketolase, pyrimidine binding domain QR42_RS10855 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase QR42_RS10865 SM00091 PAS domain QR42_RS10865 SM00382 ATPases associated with a variety of cellular activities QR42_RS10890 SM00448 cheY-homologous receiver domain QR42_RS10895 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QR42_RS10910 SM00363 S4 RNA-binding domain QR42_RS10915 SM00861 Transketolase, pyrimidine binding domain QR42_RS10950 SM00878 Biotin carboxylase C-terminal domain QR42_RS10995 SM00382 ATPases associated with a variety of cellular activities QR42_RS11005 SM00841 Elongation factor P, C-terminal QR42_RS11005 SM01185 QR42_RS11005 QR42_RS11040 SM00529 Helix-turn-helix diphteria tox regulatory element QR42_RS11050 SM00450 Rhodanese Homology Domain QR42_RS11070 SM00487 DEAD-like helicases superfamily QR42_RS11070 SM00490 helicase superfamily c-terminal domain QR42_RS11080 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS11140 SM00382 ATPases associated with a variety of cellular activities QR42_RS11165 SM00849 Metallo-beta-lactamase superfamily QR42_RS11185 SM00631 QR42_RS11185 QR42_RS11205 SM00028 Tetratricopeptide repeats QR42_RS11235 SM00382 ATPases associated with a variety of cellular activities QR42_RS11240 SM00382 ATPases associated with a variety of cellular activities QR42_RS11325 SM00382 ATPases associated with a variety of cellular activities QR42_RS11340 SM00518 AP endonuclease family 2 QR42_RS11345 SM00487 DEAD-like helicases superfamily QR42_RS11345 SM00490 helicase superfamily c-terminal domain QR42_RS11380 SM00400 zinc finger QR42_RS11380 SM00493 QR42_RS11380 QR42_RS11395 SM00116 Domain in cystathionine beta-synthase and other proteins. QR42_RS11435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QR42_RS11485 SM00729 Elongator protein 3, MiaB family, Radical SAM QR42_RS11500 SM00271 DnaJ molecular chaperone homology domain QR42_RS11520 SM00729 Elongator protein 3, MiaB family, Radical SAM QR42_RS11525 SM00838 Elongation factor G C-terminus QR42_RS11560 SM00849 Metallo-beta-lactamase superfamily QR42_RS11570 SM00278 Helix-hairpin-helix DNA-binding motif class 1 QR42_RS11590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QR42_RS11600 SM01103 QR42_RS11600 QR42_RS11635 SM00028 Tetratricopeptide repeats QR42_RS11705 SM01007 Class II Aldolase and Adducin N-terminal domain QR42_RS11715 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS11725 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS11740 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family QR42_RS11900 SM00382 ATPases associated with a variety of cellular activities QR42_RS11905 SM00062 Bacterial periplasmic substrate-binding proteins QR42_RS11925 SM00829 Enoylreductase QR42_RS12050 SM00732 Likely ribonuclease with RNase H fold. QR42_RS12060 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain QR42_RS12070 SM00382 ATPases associated with a variety of cellular activities QR42_RS12075 SM00062 Bacterial periplasmic substrate-binding proteins QR42_RS12075 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. QR42_RS12105 SM00028 Tetratricopeptide repeats QR42_RS12125 SM00382 ATPases associated with a variety of cellular activities QR42_RS12145 SM00287 Bacterial SH3 domain homologues QR42_RS12145 SM00646 QR42_RS12145 QR42_RS12155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QR42_RS12155 SM00954 Region found in RelA / SpoT proteins QR42_RS12205 SM01323 QR42_RS12205 QR42_RS12225 SM00382 ATPases associated with a variety of cellular activities QR42_RS12230 SM00278 Helix-hairpin-helix DNA-binding motif class 1 QR42_RS12265 SM00257 Lysin motif QR42_RS12310 SM01317 QR42_RS12310 QR42_RS12405 SM00257 Lysin motif QR42_RS12415 SM01004 Delta-aminolevulinic acid dehydratase QR42_RS12450 SM00382 ATPases associated with a variety of cellular activities QR42_RS12450 SM00464 Found in ATP-dependent protease La (LON) QR42_RS12455 SM00382 ATPases associated with a variety of cellular activities QR42_RS12460 SM00382 ATPases associated with a variety of cellular activities QR42_RS12460 SM00994 ClpX C4-type zinc finger QR42_RS12460 SM01086 C-terminal, D2-small domain, of ClpB protein QR42_RS12485 SM01329 QR42_RS12485 QR42_RS12490 SM00917 LeuA allosteric (dimerisation) domain QR42_RS12545 SM00612 QR42_RS12545 QR42_RS12580 SM00909 Sporulation and spore germination QR42_RS12590 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS12595 SM00421 helix_turn_helix, Lux Regulon QR42_RS12650 SM00465 GIY-YIG type nucleases (URI domain) QR42_RS12660 SM00813 Alpha-L-arabinofuranosidase C-terminus QR42_RS12665 SM00893 Electron transfer flavoprotein domain QR42_RS12670 SM00893 Electron transfer flavoprotein domain QR42_RS12700 SM00463 Small MutS-related domain QR42_RS12700 SM00533 DNA-binding domain of DNA mismatch repair MUTS family QR42_RS12700 SM00534 ATPase domain of DNA mismatch repair MUTS family QR42_RS12705 SM00278 Helix-hairpin-helix DNA-binding motif class 1 QR42_RS12705 SM00481 DNA polymerase alpha chain like domain QR42_RS12705 SM00483 DNA polymerase X family QR42_RS12725 SM00873 B3/4 domain QR42_RS12725 SM00874 tRNA synthetase B5 domain QR42_RS12725 SM00896 Ferredoxin-fold anticodon binding domain QR42_RS12735 SM00967 RNA 2'-O ribose methyltransferase substrate binding QR42_RS12790 SM00448 cheY-homologous receiver domain QR42_RS12790 SM00850 LytTr DNA-binding domain QR42_RS12795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. QR42_RS12795 SM00387 Histidine kinase-like ATPases QR42_RS12805 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) QR42_RS12805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS12810 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain QR42_RS12825 SM00382 ATPases associated with a variety of cellular activities QR42_RS12850 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain QR42_RS12865 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain QR42_RS12865 SM01232 QR42_RS12865 QR42_RS12870 SM00278 Helix-hairpin-helix DNA-binding motif class 1 QR42_RS12870 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs QR42_RS12870 SM00474 3'-5' exonuclease QR42_RS12870 SM00475 5'-3' exonuclease QR42_RS12870 SM00482 DNA polymerase A domain QR42_RS12875 SM00387 Histidine kinase-like ATPases QR42_RS12875 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS12880 SM00448 cheY-homologous receiver domain QR42_RS12880 SM00862 Transcriptional regulatory protein, C terminal QR42_RS12890 SM01329 QR42_RS12890 QR42_RS12935 SM00919 Malic enzyme, NAD binding domain QR42_RS12935 SM01274 QR42_RS12935 QR42_RS12940 SM00481 DNA polymerase alpha chain like domain QR42_RS12970 SM00116 Domain in cystathionine beta-synthase and other proteins. QR42_RS12975 SM00849 Metallo-beta-lactamase superfamily QR42_RS13000 SM00852 Probable molybdopterin binding domain QR42_RS13045 SM00487 DEAD-like helicases superfamily QR42_RS13045 SM00490 helicase superfamily c-terminal domain QR42_RS13060 SM00421 helix_turn_helix, Lux Regulon QR42_RS13060 SM00448 cheY-homologous receiver domain QR42_RS13070 SM00448 cheY-homologous receiver domain QR42_RS13070 SM00862 Transcriptional regulatory protein, C terminal QR42_RS13075 SM00387 Histidine kinase-like ATPases QR42_RS13080 SM00382 ATPases associated with a variety of cellular activities QR42_RS13100 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS13125 SM00981 QR42_RS13125 QR42_RS13160 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. QR42_RS13165 SM00363 S4 RNA-binding domain QR42_RS13165 SM01390 QR42_RS13165 QR42_RS13190 SM00363 S4 RNA-binding domain QR42_RS13205 SM00116 Domain in cystathionine beta-synthase and other proteins. QR42_RS13215 SM00354 helix_turn _helix lactose operon repressor QR42_RS13220 SM00830 Chorismate mutase type II QR42_RS13245 SM00382 ATPases associated with a variety of cellular activities QR42_RS13245 SM00843 QR42_RS13245 QR42_RS13285 SM00919 Malic enzyme, NAD binding domain QR42_RS13285 SM01274 QR42_RS13285 QR42_RS13290 SM00849 Metallo-beta-lactamase superfamily QR42_RS13350 SM00420 helix_turn_helix, Deoxyribose operon repressor QR42_RS13355 SM00363 S4 RNA-binding domain QR42_RS13390 SM00450 Rhodanese Homology Domain QR42_RS13420 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS13470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) QR42_RS13470 SM00091 PAS domain QR42_RS13485 SM00382 ATPases associated with a variety of cellular activities QR42_RS13495 SM00382 ATPases associated with a variety of cellular activities QR42_RS13500 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS13535 SM00729 Elongator protein 3, MiaB family, Radical SAM QR42_RS13595 SM00563 Phosphate acyltransferases QR42_RS13610 SM00382 ATPases associated with a variety of cellular activities QR42_RS13670 SM01234 QR42_RS13670 QR42_RS13675 SM00947 Carbonic anhydrase QR42_RS13710 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain QR42_RS13890 SM00244 prohibitin homologues QR42_RS13930 SM00644 QR42_RS13930 QR42_RS14005 SM00257 Lysin motif QR42_RS14085 SM00421 helix_turn_helix, Lux Regulon QR42_RS14105 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS14110 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS14120 SM00729 Elongator protein 3, MiaB family, Radical SAM QR42_RS14120 SM00876 Biotin and Thiamin Synthesis associated domain QR42_RS14155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS14155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS14155 SM00319 Homologues of the ligand binding domain of Tar QR42_RS14160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS14160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS14165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS14165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS14165 SM00319 Homologues of the ligand binding domain of Tar QR42_RS14170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS14170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS14170 SM00319 Homologues of the ligand binding domain of Tar QR42_RS14195 SM01091 Transporter associated domain QR42_RS14245 SM00316 Ribosomal protein S1-like RNA-binding domain QR42_RS14255 SM00344 helix_turn_helix ASNC type QR42_RS14275 SM00387 Histidine kinase-like ATPases QR42_RS14275 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS14280 SM01298 QR42_RS14280 QR42_RS14285 SM00479 QR42_RS14285 QR42_RS14310 SM00387 Histidine kinase-like ATPases QR42_RS14315 SM00448 cheY-homologous receiver domain QR42_RS14325 SM00382 ATPases associated with a variety of cellular activities QR42_RS14390 SM00421 helix_turn_helix, Lux Regulon QR42_RS14390 SM00448 cheY-homologous receiver domain QR42_RS14395 SM00387 Histidine kinase-like ATPases QR42_RS14420 SM00052 Putative diguanylate phosphodiesterase QR42_RS14470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QR42_RS14515 SM01002 Alanine dehydrogenase/PNT, C-terminal domain QR42_RS14515 SM01003 Alanine dehydrogenase/PNT, N-terminal domain QR42_RS14570 SM00422 helix_turn_helix, mercury resistance QR42_RS14665 SM00729 Elongator protein 3, MiaB family, Radical SAM QR42_RS14700 SM00835 Cupin QR42_RS14755 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS14760 SM00448 cheY-homologous receiver domain QR42_RS14760 SM00862 Transcriptional regulatory protein, C terminal QR42_RS14835 SM00382 ATPases associated with a variety of cellular activities QR42_RS14855 SM00382 ATPases associated with a variety of cellular activities QR42_RS14855 SM00930 QR42_RS14855 QR42_RS14870 SM00493 QR42_RS14870 QR42_RS14920 SM00382 ATPases associated with a variety of cellular activities QR42_RS14935 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QR42_RS14940 SM00448 cheY-homologous receiver domain QR42_RS14940 SM00862 Transcriptional regulatory protein, C terminal QR42_RS14945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS14945 SM00387 Histidine kinase-like ATPases QR42_RS14945 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS14980 SM00421 helix_turn_helix, Lux Regulon QR42_RS14980 SM00448 cheY-homologous receiver domain QR42_RS14985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS14985 SM00387 Histidine kinase-like ATPases QR42_RS15010 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS15040 SM00382 ATPases associated with a variety of cellular activities QR42_RS15055 SM00710 Parallel beta-helix repeats QR42_RS15060 SM00858 QR42_RS15060 QR42_RS15070 SM00354 helix_turn _helix lactose operon repressor QR42_RS15080 SM00387 Histidine kinase-like ATPases QR42_RS15080 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS15085 SM00448 cheY-homologous receiver domain QR42_RS15085 SM00862 Transcriptional regulatory protein, C terminal QR42_RS15090 SM00382 ATPases associated with a variety of cellular activities QR42_RS15120 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS15180 SM00382 ATPases associated with a variety of cellular activities QR42_RS15205 SM00448 cheY-homologous receiver domain QR42_RS15210 SM00387 Histidine kinase-like ATPases QR42_RS15245 SM00267 diguanylate cyclase QR42_RS15280 SM00316 Ribosomal protein S1-like RNA-binding domain QR42_RS15280 SM00357 Cold shock protein domain QR42_RS15280 SM00955 QR42_RS15280 QR42_RS15295 SM00966 SpoVT / AbrB like domain QR42_RS15300 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS15305 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS15310 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS15335 SM00116 Domain in cystathionine beta-synthase and other proteins. QR42_RS15335 SM00382 ATPases associated with a variety of cellular activities QR42_RS15375 SM00382 ATPases associated with a variety of cellular activities QR42_RS15385 SM01192 QR42_RS15385 QR42_RS15385 SM01193 QR42_RS15385 QR42_RS15405 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain QR42_RS15430 SM00091 PAS domain QR42_RS15430 SM00382 ATPases associated with a variety of cellular activities QR42_RS15435 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS15435 SM00895 QR42_RS15435 QR42_RS15455 SM00382 ATPases associated with a variety of cellular activities QR42_RS15460 SM00382 ATPases associated with a variety of cellular activities QR42_RS15545 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS15575 SM00382 ATPases associated with a variety of cellular activities QR42_RS15580 SM00382 ATPases associated with a variety of cellular activities QR42_RS15585 SM00382 ATPases associated with a variety of cellular activities QR42_RS15650 SM00947 Carbonic anhydrase QR42_RS15705 SM00028 Tetratricopeptide repeats QR42_RS15805 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS15805 SM00866 QR42_RS15805 QR42_RS15840 SM00382 ATPases associated with a variety of cellular activities QR42_RS15845 SM00487 DEAD-like helicases superfamily QR42_RS15845 SM00490 helicase superfamily c-terminal domain QR42_RS15880 SM00448 cheY-homologous receiver domain QR42_RS15880 SM00862 Transcriptional regulatory protein, C terminal QR42_RS15885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS15885 SM00387 Histidine kinase-like ATPases QR42_RS15885 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS15915 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QR42_RS15925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QR42_RS15925 SM00245 tail specific protease QR42_RS15945 SM00382 ATPases associated with a variety of cellular activities QR42_RS15970 SM00937 QR42_RS15970 QR42_RS15975 SM00957 SecA DEAD-like domain QR42_RS15975 SM00958 SecA preprotein cross-linking domain QR42_RS15985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS15985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS16065 SM00487 DEAD-like helicases superfamily QR42_RS16065 SM00490 helicase superfamily c-terminal domain QR42_RS16075 SM00421 helix_turn_helix, Lux Regulon QR42_RS16075 SM00448 cheY-homologous receiver domain QR42_RS16080 SM00387 Histidine kinase-like ATPases QR42_RS16125 SM00984 UDP binding domain QR42_RS16150 SM00646 QR42_RS16150 QR42_RS16180 SM00382 ATPases associated with a variety of cellular activities QR42_RS16190 SM00984 UDP binding domain QR42_RS16250 SM00047 Lysozyme subfamily 2 QR42_RS16250 SM00287 Bacterial SH3 domain homologues QR42_RS16280 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS16280 SM00448 cheY-homologous receiver domain QR42_RS16285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS16285 SM00387 Histidine kinase-like ATPases QR42_RS16310 SM00354 helix_turn _helix lactose operon repressor QR42_RS16365 SM00854 Bacterial capsule synthesis protein PGA_cap QR42_RS16395 SM00354 helix_turn _helix lactose operon repressor QR42_RS16410 SM00382 ATPases associated with a variety of cellular activities QR42_RS16425 SM00903 Flavin reductase like domain QR42_RS16445 SM00344 helix_turn_helix ASNC type QR42_RS16460 SM00984 UDP binding domain QR42_RS16470 SM00487 DEAD-like helicases superfamily QR42_RS16470 SM00490 helicase superfamily c-terminal domain QR42_RS16475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) QR42_RS16475 SM00091 PAS domain QR42_RS16505 SM00028 Tetratricopeptide repeats QR42_RS16530 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS16540 SM00014 Acid phosphatase homologues QR42_RS16550 SM00062 Bacterial periplasmic substrate-binding proteins QR42_RS16550 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. QR42_RS16560 SM00382 ATPases associated with a variety of cellular activities QR42_RS16570 SM00938 Nitrogen regulatory protein P-II QR42_RS16595 SM00382 ATPases associated with a variety of cellular activities QR42_RS16620 SM00833 Cobalamin synthesis protein cobW C-terminal domain QR42_RS16630 SM00729 Elongator protein 3, MiaB family, Radical SAM QR42_RS16650 SM00327 von Willebrand factor (vWF) type A domain QR42_RS16655 SM00327 von Willebrand factor (vWF) type A domain QR42_RS16690 SM00382 ATPases associated with a variety of cellular activities QR42_RS16755 SM00226 Low molecular weight phosphatase family QR42_RS16790 SM00937 QR42_RS16790 QR42_RS16805 SM00919 Malic enzyme, NAD binding domain QR42_RS16805 SM01274 QR42_RS16805 QR42_RS16820 SM00357 Cold shock protein domain QR42_RS16820 SM00382 ATPases associated with a variety of cellular activities QR42_RS16820 SM00959 Rho termination factor, N-terminal domain QR42_RS16845 SM00448 cheY-homologous receiver domain QR42_RS16895 SM00155 Phospholipase D. Active site motifs. QR42_RS16920 SM00382 ATPases associated with a variety of cellular activities QR42_RS16925 SM00155 Phospholipase D. Active site motifs. QR42_RS16935 SM00836 DALR anticodon binding domain QR42_RS16935 SM01016 Arginyl tRNA synthetase N terminal dom QR42_RS17025 SM00062 Bacterial periplasmic substrate-binding proteins QR42_RS17035 SM00382 ATPases associated with a variety of cellular activities QR42_RS17045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QR42_RS17070 SM00028 Tetratricopeptide repeats QR42_RS17080 SM00860 SMI1 / KNR4 family QR42_RS17150 SM00344 helix_turn_helix ASNC type QR42_RS17220 SM00858 QR42_RS17220 QR42_RS17255 SM00835 Cupin QR42_RS17280 SM00986 Uracil DNA glycosylase superfamily QR42_RS17280 SM00987 UreE urease accessory protein, C-terminal domain QR42_RS17320 SM00640 Glycosyl hydrolases family 32 QR42_RS17330 SM01061 CAT RNA binding domain QR42_RS17405 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS17480 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase QR42_RS17490 SM00382 ATPases associated with a variety of cellular activities QR42_RS17500 SM00062 Bacterial periplasmic substrate-binding proteins QR42_RS17500 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. QR42_RS17510 SM00954 Region found in RelA / SpoT proteins QR42_RS17520 SM00382 ATPases associated with a variety of cellular activities QR42_RS17530 SM00710 Parallel beta-helix repeats QR42_RS17585 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase QR42_RS17605 SM00656 QR42_RS17605 QR42_RS17610 SM00382 ATPases associated with a variety of cellular activities QR42_RS17615 SM00382 ATPases associated with a variety of cellular activities QR42_RS17630 SM00382 ATPases associated with a variety of cellular activities QR42_RS17650 SM00382 ATPases associated with a variety of cellular activities QR42_RS17665 SM00725 NEAr Transporter domain QR42_RS17670 SM00725 NEAr Transporter domain QR42_RS17675 SM00725 NEAr Transporter domain QR42_RS17765 SM00870 QR42_RS17765 QR42_RS17770 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS17775 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS17850 SM01061 CAT RNA binding domain QR42_RS17860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS17870 SM00382 ATPases associated with a variety of cellular activities QR42_RS17920 SM00347 helix_turn_helix multiple antibiotic resistance protein QR42_RS17920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor QR42_RS17925 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain QR42_RS17935 SM01133 QR42_RS17935 QR42_RS17970 SM00421 helix_turn_helix, Lux Regulon QR42_RS17980 SM00422 helix_turn_helix, mercury resistance QR42_RS17990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) QR42_RS17990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QR42_RS18055 SM00354 helix_turn _helix lactose operon repressor QR42_RS18100 SM00382 ATPases associated with a variety of cellular activities QR42_RS18145 SM00382 ATPases associated with a variety of cellular activities QR42_RS18155 SM00028 Tetratricopeptide repeats QR42_RS18160 SM01061 CAT RNA binding domain QR42_RS18200 SM00530 Helix-turn-helix XRE-family like proteins QR42_RS18215 SM00354 helix_turn _helix lactose operon repressor QR42_RS18265 SM00345 helix_turn_helix gluconate operon transcriptional repressor QR42_RS18265 SM00866 QR42_RS18265 QR42_RS18305 SM00849 Metallo-beta-lactamase superfamily QR42_RS18315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor QR42_RS18325 SM00507 HNH nucleases QR42_RS18340 SM00382 ATPases associated with a variety of cellular activities QR42_RS18360 SM00382 ATPases associated with a variety of cellular activities QR42_RS18380 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QR42_RS18385 SM00849 Metallo-beta-lactamase superfamily QR42_RS18400 SM00091 PAS domain QR42_RS18400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QR42_RS18400 SM00387 Histidine kinase-like ATPases QR42_RS18400 SM00388 His Kinase A (phosphoacceptor) domain QR42_RS18405 SM00448 cheY-homologous receiver domain QR42_RS18405 SM00862 Transcriptional regulatory protein, C terminal QR42_RS18445 SM00788 Adenylosuccinate synthetase QR42_RS18455 SM00382 ATPases associated with a variety of cellular activities QR42_RS18485 SM00822 QR42_RS18485 QR42_RS18505 SM00823 Phosphopantetheine attachment site QR42_RS18510 SM00923 MbtH-like protein QR42_RS18515 SM00342 helix_turn_helix, arabinose operon control protein QR42_RS18540 SM00267 diguanylate cyclase QR42_RS18550 SM01131 QR42_RS18550 QR42_RS18570 SM01060 QR42_RS18570 QR42_RS18595 SM00382 ATPases associated with a variety of cellular activities QR42_RS18645 SM00470 ParB-like nuclease domain QR42_RS18660 SM00470 ParB-like nuclease domain QR42_RS18670 SM01228 QR42_RS18670 QR42_RS18680 SM00393 Putative single-stranded nucleic acids-binding domain QR42_RS18680 SM01245 QR42_RS18680