locus-tag class description KS08_RS00005 PF11638 DnaA N-terminal domain KS08_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix KS08_RS00005 PF00308 Bacterial dnaA protein KS08_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KS08_RS00010 PF02767 DNA polymerase III beta subunit, central domain KS08_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KS08_RS00020 PF02463 RecF/RecN/SMC N terminal domain KS08_RS00025 PF04025 Domain of unknown function (DUF370) KS08_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus KS08_RS00030 PF00204 DNA gyrase B KS08_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS00030 PF01751 Toprim domain KS08_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller KS08_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A KS08_RS00065 PF14175 YaaC-like Protein KS08_RS00070 PF00571 CBS domain KS08_RS00070 PF00478 IMP dehydrogenase / GMP reductase domain KS08_RS00075 PF00768 D-alanyl-D-alanine carboxypeptidase KS08_RS00075 PF07943 Penicillin-binding protein 5, C-terminal domain KS08_RS00080 PF01680 SOR/SNZ family KS08_RS00085 PF01174 SNO glutamine amidotransferase family KS08_RS00090 PF02403 Seryl-tRNA synthetase N-terminal domain KS08_RS00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KS08_RS00095 PF02595 Glycerate kinase family KS08_RS00105 PF01712 Deoxynucleoside kinase KS08_RS00110 PF01712 Deoxynucleoside kinase KS08_RS00115 PF01476 LysM domain KS08_RS00115 PF00704 Glycosyl hydrolases family 18 KS08_RS00120 PF00857 Isochorismatase family KS08_RS00125 PF14437 MafB19-like deaminase KS08_RS00130 PF12169 DNA polymerase III subunits gamma and tau domain III KS08_RS00135 PF02575 YbaB/EbfC DNA-binding family KS08_RS00140 PF02132 RecR protein KS08_RS00140 PF13662 Toprim domain KS08_RS00145 PF10704 Protein of unknown function (DUF2508) KS08_RS00150 PF07441 SigmaK-factor processing regulatory protein BofA KS08_RS00180 PF10764 Inhibitor of sigma-G Gin KS08_RS00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein KS08_RS00190 PF05816 Toxic anion resistance protein (TelA) KS08_RS00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KS08_RS00195 PF01276 Orn/Lys/Arg decarboxylase, major domain KS08_RS00200 PF02223 Thymidylate kinase KS08_RS00205 PF06153 Cyclic-di-AMP receptor KS08_RS00210 PF03885 Protein of unknown function (DUF327) KS08_RS00215 PF09115 DNA polymerase III, delta subunit, C terminal KS08_RS00220 PF04468 PSP1 C-terminal conserved region KS08_RS00225 PF06156 Initiation control protein YabA KS08_RS00230 PF05175 Methyltransferase small domain KS08_RS00235 PF01541 GIY-YIG catalytic domain KS08_RS00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KS08_RS00245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KS08_RS00245 PF18277 AbrB C-terminal domain KS08_RS00250 PF01588 Putative tRNA binding domain KS08_RS00250 PF09334 tRNA synthetases class I (M) KS08_RS00250 PF08264 Anticodon-binding domain of tRNA KS08_RS00255 PF01026 TatD related DNase KS08_RS00260 PF07501 G5 domain KS08_RS00260 PF03990 G5-linked-Ubiquitin-like domain KS08_RS00260 PF06725 3D domain KS08_RS00265 PF13331 Domain of unknown function (DUF4093) KS08_RS00265 PF13662 Toprim domain KS08_RS00270 PF00398 Ribosomal RNA adenine dimethylase KS08_RS00275 PF05582 YabG peptidase U57 KS08_RS00280 PF06257 Biofilm formation stimulator VEG KS08_RS00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type KS08_RS00290 PF00288 GHMP kinases N terminal domain KS08_RS00290 PF08544 GHMP kinases C terminal KS08_RS00295 PF09182 Bacterial purine repressor, N-terminal KS08_RS00295 PF00156 Phosphoribosyl transferase domain KS08_RS00300 PF01042 Endoribonuclease L-PSP KS08_RS00305 PF04026 SpoVG KS08_RS00310 PF00483 Nucleotidyl transferase KS08_RS00310 PF00132 Bacterial transferase hexapeptide (six repeats) KS08_RS00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KS08_RS00315 PF14572 Phosphoribosyl synthetase-associated domain KS08_RS00320 PF01386 Ribosomal L25p family KS08_RS00320 PF14693 Ribosomal protein TL5, C-terminal domain KS08_RS00325 PF01195 Peptidyl-tRNA hydrolase KS08_RS00330 PF10955 Protein of unknown function (DUF2757) KS08_RS00335 PF02559 CarD-like/TRCF domain KS08_RS00335 PF00270 DEAD/DEAH box helicase KS08_RS00335 PF00271 Helicase conserved C-terminal domain KS08_RS00335 PF03461 TRCF domain KS08_RS00335 PF17757 UvrB interaction domain KS08_RS00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor KS08_RS00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KS08_RS00345 PF14667 Polysaccharide biosynthesis C-terminal domain KS08_RS00345 PF01943 Polysaccharide biosynthesis protein KS08_RS00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KS08_RS00350 PF03819 MazG nucleotide pyrophosphohydrolase domain KS08_RS00355 PF01479 S4 domain KS08_RS00360 PF07873 YabP family KS08_RS00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) KS08_RS00370 PF04977 Septum formation initiator KS08_RS00375 PF00575 S1 RNA binding domain KS08_RS00390 PF07228 Stage II sporulation protein E (SpoIIE) KS08_RS00395 PF00092 von Willebrand factor type A domain KS08_RS00400 PF00069 Protein kinase domain KS08_RS00405 PF01171 PP-loop family KS08_RS00405 PF09179 TilS substrate binding domain KS08_RS00405 PF11734 TilS substrate C-terminal domain KS08_RS00410 PF00156 Phosphoribosyl transferase domain KS08_RS00415 PF01434 Peptidase family M41 KS08_RS00415 PF06480 FtsH Extracellular KS08_RS00415 PF17862 AAA+ lid domain KS08_RS00415 PF00004 ATPase family associated with various cellular activities (AAA) KS08_RS00420 PF03309 Type III pantothenate kinase KS08_RS00425 PF01430 Hsp33 protein KS08_RS00430 PF13145 PPIC-type PPIASE domain KS08_RS00435 PF00291 Pyridoxal-phosphate dependent enzyme KS08_RS00440 PF00425 chorismate binding enzyme KS08_RS00440 PF04715 Anthranilate synthase component I, N terminal region KS08_RS00445 PF00117 Glutamine amidotransferase class-I KS08_RS00450 PF01063 Amino-transferase class IV KS08_RS00455 PF00809 Pterin binding enzyme KS08_RS00460 PF02152 Dihydroneopterin aldolase KS08_RS00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KS08_RS00470 PF01381 Helix-turn-helix KS08_RS00475 PF01207 Dihydrouridine synthase (Dus) KS08_RS00480 PF01336 OB-fold nucleic acid binding domain KS08_RS00480 PF00152 tRNA synthetases class II (D, K and N) KS08_RS00500 PF05848 CtsR N-terminal HTH domain KS08_RS00500 PF17727 CtsR C-terminal dimerization domain KS08_RS00505 PF02151 UvrB/uvrC motif KS08_RS00510 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KS08_RS00515 PF02861 Clp amino terminal domain, pathogenicity island component KS08_RS00515 PF17871 AAA lid domain KS08_RS00515 PF07724 AAA domain (Cdc48 subfamily) KS08_RS00515 PF00004 ATPase family associated with various cellular activities (AAA) KS08_RS00515 PF10431 C-terminal, D2-small domain, of ClpB protein KS08_RS00520 PF18073 Rubredoxin metal binding domain KS08_RS00525 PF02457 DisA bacterial checkpoint controller nucleotide-binding KS08_RS00525 PF10635 DisA bacterial checkpoint controller linker region KS08_RS00535 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KS08_RS00540 PF02542 YgbB family KS08_RS00545 PF00749 tRNA synthetases class I (E and Q), catalytic domain KS08_RS00550 PF00132 Bacterial transferase hexapeptide (six repeats) KS08_RS00550 PF06426 Serine acetyltransferase, N-terminal KS08_RS00555 PF09190 DALR domain KS08_RS00555 PF01406 tRNA synthetases class I (C) catalytic domain KS08_RS00560 PF00636 Ribonuclease III domain KS08_RS00565 PF08032 RNA 2'-O ribose methyltransferase substrate binding KS08_RS00565 PF00588 SpoU rRNA Methylase family KS08_RS00570 PF05991 YacP-like NYN domain KS08_RS00575 PF04542 Sigma-70 region 2 KS08_RS00575 PF08281 Sigma-70, region 4 KS08_RS00580 PF00471 Ribosomal protein L33 KS08_RS00585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KS08_RS00590 PF00467 KOW motif KS08_RS00590 PF02357 Transcription termination factor nusG KS08_RS00595 PF03946 Ribosomal protein L11, N-terminal domain KS08_RS00595 PF00298 Ribosomal protein L11, RNA binding domain KS08_RS00600 PF00687 Ribosomal protein L1p/L10e family KS08_RS00605 PF00466 Ribosomal protein L10 KS08_RS00610 PF16320 Ribosomal protein L7/L12 dimerisation domain KS08_RS00610 PF00542 Ribosomal protein L7/L12 C-terminal domain KS08_RS00615 PF05175 Methyltransferase small domain KS08_RS00620 PF10385 RNA polymerase beta subunit external 1 domain KS08_RS00620 PF00562 RNA polymerase Rpb2, domain 6 KS08_RS00620 PF04560 RNA polymerase Rpb2, domain 7 KS08_RS00620 PF04565 RNA polymerase Rpb2, domain 3 KS08_RS00620 PF04563 RNA polymerase beta subunit KS08_RS00620 PF04561 RNA polymerase Rpb2, domain 2 KS08_RS00625 PF04997 RNA polymerase Rpb1, domain 1 KS08_RS00625 PF04983 RNA polymerase Rpb1, domain 3 KS08_RS00625 PF05000 RNA polymerase Rpb1, domain 4 KS08_RS00625 PF00623 RNA polymerase Rpb1, domain 2 KS08_RS00625 PF04998 RNA polymerase Rpb1, domain 5 KS08_RS00630 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KS08_RS00635 PF00164 Ribosomal protein S12/S23 KS08_RS00640 PF00177 Ribosomal protein S7p/S5e KS08_RS00645 PF14492 Elongation Factor G, domain II KS08_RS00645 PF03764 Elongation factor G, domain IV KS08_RS00645 PF00009 Elongation factor Tu GTP binding domain KS08_RS00645 PF03144 Elongation factor Tu domain 2 KS08_RS00645 PF00679 Elongation factor G C-terminus KS08_RS00650 PF00009 Elongation factor Tu GTP binding domain KS08_RS00650 PF03143 Elongation factor Tu C-terminal domain KS08_RS00650 PF03144 Elongation factor Tu domain 2 KS08_RS00655 PF12146 Serine aminopeptidase, S33 KS08_RS00660 PF00338 Ribosomal protein S10p/S20e KS08_RS00665 PF00297 Ribosomal protein L3 KS08_RS00670 PF00573 Ribosomal protein L4/L1 family KS08_RS00675 PF00276 Ribosomal protein L23 KS08_RS00680 PF00181 Ribosomal Proteins L2, RNA binding domain KS08_RS00680 PF03947 Ribosomal Proteins L2, C-terminal domain KS08_RS00685 PF00203 Ribosomal protein S19 KS08_RS00690 PF00237 Ribosomal protein L22p/L17e KS08_RS00695 PF00189 Ribosomal protein S3, C-terminal domain KS08_RS00695 PF07650 KH domain KS08_RS00700 PF00252 Ribosomal protein L16p/L10e KS08_RS00705 PF00831 Ribosomal L29 protein KS08_RS00710 PF00366 Ribosomal protein S17 KS08_RS00715 PF00238 Ribosomal protein L14p/L23e KS08_RS00720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KS08_RS00720 PF00467 KOW motif KS08_RS00725 PF00673 ribosomal L5P family C-terminus KS08_RS00725 PF00281 Ribosomal protein L5 KS08_RS00730 PF00410 Ribosomal protein S8 KS08_RS00735 PF00347 Ribosomal protein L6 KS08_RS00740 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KS08_RS00745 PF03719 Ribosomal protein S5, C-terminal domain KS08_RS00745 PF00333 Ribosomal protein S5, N-terminal domain KS08_RS00750 PF00327 Ribosomal protein L30p/L7e KS08_RS00755 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KS08_RS00760 PF00344 SecY translocase KS08_RS00765 PF05191 Adenylate kinase, active site lid KS08_RS00770 PF00557 Metallopeptidase family M24 KS08_RS00775 PF01176 Translation initiation factor 1A / IF-1 KS08_RS00780 PF00444 Ribosomal protein L36 KS08_RS00785 PF00416 Ribosomal protein S13/S18 KS08_RS00790 PF00411 Ribosomal protein S11 KS08_RS00795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KS08_RS00795 PF01000 RNA polymerase Rpb3/RpoA insert domain KS08_RS00795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KS08_RS00800 PF01196 Ribosomal protein L17 KS08_RS00805 PF00005 ABC transporter KS08_RS00810 PF00005 ABC transporter KS08_RS00815 PF02361 Cobalt transport protein KS08_RS00820 PF01416 tRNA pseudouridine synthase KS08_RS00825 PF00572 Ribosomal protein L13 KS08_RS00830 PF00380 Ribosomal protein S9/S16 KS08_RS00835 PF08241 Methyltransferase domain KS08_RS00840 PF10730 Protein of unknown function (DUF2521) KS08_RS00845 PF01520 N-acetylmuramoyl-L-alanine amidase KS08_RS00850 PF10609 NUBPL iron-transfer P-loop NTPase KS08_RS00855 PF17898 Spore germination GerD central core domain KS08_RS00860 PF14089 KinB-signalling pathway activation in sporulation KS08_RS00865 PF01522 Polysaccharide deacetylase KS08_RS00885 PF07690 Major Facilitator Superfamily KS08_RS00890 PF00202 Aminotransferase class-III KS08_RS00900 PF00107 Zinc-binding dehydrogenase KS08_RS00900 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS00905 PF01740 STAS domain KS08_RS00905 PF00916 Sulfate permease family KS08_RS00910 PF01758 Sodium Bile acid symporter family KS08_RS00915 PF00756 Putative esterase KS08_RS00920 PF01032 FecCD transport family KS08_RS00925 PF01032 FecCD transport family KS08_RS00930 PF01497 Periplasmic binding protein KS08_RS00935 PF12833 Helix-turn-helix domain KS08_RS00935 PF01497 Periplasmic binding protein KS08_RS00940 PF07075 Protein of unknown function (DUF1343) KS08_RS00945 PF01915 Glycosyl hydrolase family 3 C-terminal domain KS08_RS00945 PF00933 Glycosyl hydrolase family 3 N terminal domain KS08_RS00950 PF00144 Beta-lactamase KS08_RS00955 PF00367 phosphotransferase system, EIIB KS08_RS00955 PF02378 Phosphotransferase system, EIIC KS08_RS00960 PF01380 SIS domain KS08_RS00970 PF04463 Protein of unknown function (DUF523) KS08_RS01000 PF04542 Sigma-70 region 2 KS08_RS01000 PF08281 Sigma-70, region 4 KS08_RS01005 PF13490 Putative zinc-finger KS08_RS01010 PF02457 DisA bacterial checkpoint controller nucleotide-binding KS08_RS01015 PF07949 YbbR-like protein KS08_RS01020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KS08_RS01020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KS08_RS01020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KS08_RS01020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KS08_RS01025 PF01380 SIS domain KS08_RS01050 PF16226 Domain of unknown function (DUF4885) KS08_RS01055 PF00248 Aldo/keto reductase family KS08_RS01060 PF04172 LrgB-like family KS08_RS01065 PF03788 LrgA family KS08_RS01070 PF01047 MarR family KS08_RS01075 PF00324 Amino acid permease KS08_RS01080 PF13419 Haloacid dehalogenase-like hydrolase KS08_RS01085 PF07730 Histidine kinase KS08_RS01090 PF00196 Bacterial regulatory proteins, luxR family KS08_RS01090 PF00072 Response regulator receiver domain KS08_RS01095 PF00005 ABC transporter KS08_RS01115 PF16219 Domain of unknown function (DUF4879) KS08_RS01120 PF17334 Minor curli fiber component A KS08_RS01135 PF13520 Amino acid permease KS08_RS01140 PF10852 Protein of unknown function (DUF2651) KS08_RS01145 PF03009 Glycerophosphoryl diester phosphodiesterase family KS08_RS01150 PF07690 Major Facilitator Superfamily KS08_RS01155 PF10852 Protein of unknown function (DUF2651) KS08_RS01160 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal KS08_RS01160 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal KS08_RS01175 PF00465 Iron-containing alcohol dehydrogenase KS08_RS01180 PF02222 ATP-grasp domain KS08_RS01185 PF01066 CDP-alcohol phosphatidyltransferase KS08_RS01190 PF09335 SNARE associated Golgi protein KS08_RS01195 PF02666 Phosphatidylserine decarboxylase KS08_RS01205 PF17773 UPF0176 acylphosphatase like domain KS08_RS01205 PF12368 Rhodanase C-terminal KS08_RS01205 PF00581 Rhodanese-like domain KS08_RS01210 PF00375 Sodium:dicarboxylate symporter family KS08_RS01215 PF01063 Amino-transferase class IV KS08_RS01220 PF00324 Amino acid permease KS08_RS01225 PF02574 Homocysteine S-methyltransferase KS08_RS01230 PF01235 Sodium:alanine symporter family KS08_RS01235 PF04960 Glutaminase KS08_RS01240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS01245 PF00072 Response regulator receiver domain KS08_RS01245 PF08664 YcbB domain KS08_RS01250 PF01636 Phosphotransferase enzyme family KS08_RS01255 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein KS08_RS01265 PF16916 Dimerisation domain of Zinc Transporter KS08_RS01265 PF01545 Cation efflux family KS08_RS01270 PF00881 Nitroreductase family KS08_RS01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS01280 PF07681 DoxX KS08_RS01285 PF00085 Thioredoxin KS08_RS01295 PF10710 Protein of unknown function (DUF2512) KS08_RS01300 PF07486 Cell Wall Hydrolase KS08_RS01305 PF09423 PhoD-like phosphatase KS08_RS01305 PF16655 PhoD-like phosphatase, N-terminal domain KS08_RS01310 PF02416 mttA/Hcf106 family KS08_RS01315 PF00902 Sec-independent protein translocase protein (TatC) KS08_RS01320 PF01470 Pyroglutamyl peptidase KS08_RS01325 PF00266 Aminotransferase class-V KS08_RS01330 PF07690 Major Facilitator Superfamily KS08_RS01335 PF00440 Bacterial regulatory proteins, tetR family KS08_RS01340 PF01674 Lipase (class 2) KS08_RS01345 PF05225 helix-turn-helix, Psq domain KS08_RS01345 PF02810 SEC-C motif KS08_RS01350 PF00248 Aldo/keto reductase family KS08_RS01355 PF17118 Domain of unknown function (DUF5105) KS08_RS01355 PF11611 Domain of unknown function (DUF4352) KS08_RS01360 PF16244 Domain of unknown function (DUF4901) KS08_RS01365 PF16244 Domain of unknown function (DUF4901) KS08_RS01370 PF13539 D-alanyl-D-alanine carboxypeptidase KS08_RS01375 PF18801 response regulator aspartate phosphatase H, N terminal KS08_RS01385 PF00128 Alpha amylase, catalytic domain KS08_RS01395 PF10400 Virulence activator alpha C-term KS08_RS01395 PF03551 Transcriptional regulator PadR-like family KS08_RS01400 PF01297 Zinc-uptake complex component A periplasmic KS08_RS01405 PF00005 ABC transporter KS08_RS01410 PF00950 ABC 3 transport family KS08_RS01415 PF00296 Luciferase-like monooxygenase KS08_RS01420 PF02342 TerD domain KS08_RS01425 PF02342 TerD domain KS08_RS01430 PF02342 TerD domain KS08_RS01435 PF03741 Integral membrane protein TerC family KS08_RS01440 PF14266 Putative component of 'biosynthetic module' KS08_RS01445 PF05816 Toxic anion resistance protein (TelA) KS08_RS01450 PF07690 Major Facilitator Superfamily KS08_RS01455 PF00005 ABC transporter KS08_RS01455 PF00571 CBS domain KS08_RS01460 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS01465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KS08_RS01470 PF01546 Peptidase family M20/M25/M40 KS08_RS01470 PF07687 Peptidase dimerisation domain KS08_RS01475 PF03606 C4-dicarboxylate anaerobic carrier KS08_RS01485 PF06271 RDD family KS08_RS01490 PF00056 lactate/malate dehydrogenase, NAD binding domain KS08_RS01490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KS08_RS01495 PF07690 Major Facilitator Superfamily KS08_RS01500 PF01047 MarR family KS08_RS01505 PF01810 LysE type translocator KS08_RS01510 PF08892 YqcI/YcgG family KS08_RS01515 PF00324 Amino acid permease KS08_RS01520 PF09347 Domain of unknown function (DUF1989) KS08_RS01525 PF02540 NAD synthase KS08_RS01530 PF01261 Xylose isomerase-like TIM barrel KS08_RS01535 PF07690 Major Facilitator Superfamily KS08_RS01540 PF01202 Shikimate kinase KS08_RS01545 PF05448 Acetyl xylan esterase (AXE1) KS08_RS01550 PF10127 RNA repair pathway DNA polymerase beta family KS08_RS01555 PF01619 Proline dehydrogenase KS08_RS01560 PF00171 Aldehyde dehydrogenase family KS08_RS01565 PF00474 Sodium:solute symporter family KS08_RS01570 PF13556 PucR C-terminal helix-turn-helix domain KS08_RS01570 PF17853 GGDEF-like domain KS08_RS01575 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS01580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KS08_RS01585 PF00355 Rieske [2Fe-2S] domain KS08_RS01590 PF04324 BFD-like [2Fe-2S] binding domain KS08_RS01590 PF18267 Rubredoxin NAD+ reductase C-terminal domain KS08_RS01590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KS08_RS01590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KS08_RS01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS01595 PF07690 Major Facilitator Superfamily KS08_RS01600 PF02492 CobW/HypB/UreG, nucleotide-binding domain KS08_RS01600 PF07683 Cobalamin synthesis protein cobW C-terminal domain KS08_RS01605 PF13823 Alcohol dehydrogenase GroES-associated KS08_RS01605 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS01605 PF00107 Zinc-binding dehydrogenase KS08_RS01610 PF06271 RDD family KS08_RS01615 PF10925 Protein of unknown function (DUF2680) KS08_RS01620 PF00232 Glycosyl hydrolase family 1 KS08_RS01625 PF11033 Competence protein J (ComJ) KS08_RS01630 PF14040 Deoxyribonuclease NucA/NucB KS08_RS01635 PF01380 SIS domain KS08_RS01640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KS08_RS01645 PF01638 HxlR-like helix-turn-helix KS08_RS01655 PF00501 AMP-binding enzyme KS08_RS01655 PF00668 Condensation domain KS08_RS01655 PF00550 Phosphopantetheine attachment site KS08_RS01655 PF13193 AMP-binding enzyme C-terminal domain KS08_RS01660 PF00501 AMP-binding enzyme KS08_RS01660 PF00668 Condensation domain KS08_RS01660 PF13193 AMP-binding enzyme C-terminal domain KS08_RS01660 PF00550 Phosphopantetheine attachment site KS08_RS01665 PF00975 Thioesterase domain KS08_RS01665 PF00550 Phosphopantetheine attachment site KS08_RS01665 PF00668 Condensation domain KS08_RS01665 PF13193 AMP-binding enzyme C-terminal domain KS08_RS01665 PF00501 AMP-binding enzyme KS08_RS01670 PF00975 Thioesterase domain KS08_RS01675 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KS08_RS01675 PF07685 CobB/CobQ-like glutamine amidotransferase domain KS08_RS01675 PF00155 Aminotransferase class I and II KS08_RS01680 PF01648 4'-phosphopantetheinyl transferase superfamily KS08_RS01690 PF00005 ABC transporter KS08_RS01695 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS01700 PF00497 Bacterial extracellular solute-binding proteins, family 3 KS08_RS01705 PF03466 LysR substrate binding domain KS08_RS01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS01710 PF02441 Flavoprotein KS08_RS01715 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KS08_RS01730 PF00854 POT family KS08_RS01735 PF12708 Pectate lyase superfamily protein KS08_RS01735 PF13229 Right handed beta helix region KS08_RS01745 PF03323 Bacillus/Clostridium GerA spore germination protein KS08_RS01750 PF05504 Spore germination B3/ GerAC like, C-terminal KS08_RS01755 PF03845 Spore germination protein KS08_RS01760 PF00296 Luciferase-like monooxygenase KS08_RS01765 PF00583 Acetyltransferase (GNAT) family KS08_RS01770 PF00497 Bacterial extracellular solute-binding proteins, family 3 KS08_RS01775 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS01780 PF00005 ABC transporter KS08_RS01785 PF01546 Peptidase family M20/M25/M40 KS08_RS01785 PF07687 Peptidase dimerisation domain KS08_RS01790 PF03972 MmgE/PrpD family KS08_RS01795 PF00005 ABC transporter KS08_RS01800 PF12704 MacB-like periplasmic core domain KS08_RS01800 PF02687 FtsX-like permease family KS08_RS01805 PF00486 Transcriptional regulatory protein, C terminal KS08_RS01805 PF00072 Response regulator receiver domain KS08_RS01810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS01810 PF00672 HAMP domain KS08_RS01810 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS01815 PF18801 response regulator aspartate phosphatase H, N terminal KS08_RS01820 PF11131 Rap-phr extracellular signalling KS08_RS01830 PF00696 Amino acid kinase family KS08_RS01830 PF13840 ACT domain KS08_RS01835 PF01032 FecCD transport family KS08_RS01840 PF01032 FecCD transport family KS08_RS01845 PF00005 ABC transporter KS08_RS01850 PF01497 Periplasmic binding protein KS08_RS01855 PF07690 Major Facilitator Superfamily KS08_RS01860 PF00440 Bacterial regulatory proteins, tetR family KS08_RS01865 PF00881 Nitroreductase family KS08_RS01870 PF03992 Antibiotic biosynthesis monooxygenase KS08_RS01875 PF01022 Bacterial regulatory protein, arsR family KS08_RS01880 PF00155 Aminotransferase class I and II KS08_RS01880 PF00392 Bacterial regulatory proteins, gntR family KS08_RS01885 PF00202 Aminotransferase class-III KS08_RS01890 PF00171 Aldehyde dehydrogenase family KS08_RS01895 PF06800 Sugar transport protein KS08_RS01905 PF07987 Domain of unkown function (DUF1775) KS08_RS01910 PF13115 YtkA-like KS08_RS01910 PF05425 Copper resistance protein D KS08_RS01910 PF04234 CopC domain KS08_RS01915 PF08220 DeoR-like helix-turn-helix domain KS08_RS01915 PF05573 NosL KS08_RS01925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS08_RS01925 PF02378 Phosphotransferase system, EIIC KS08_RS01930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KS08_RS01935 PF01232 Mannitol dehydrogenase Rossmann domain KS08_RS01935 PF08125 Mannitol dehydrogenase C-terminal domain KS08_RS01940 PF07977 FabA-like domain KS08_RS01950 PF03746 LamB/YcsF family KS08_RS01955 PF01566 Natural resistance-associated macrophage protein KS08_RS01960 PF07286 Protein of unknown function (DUF1445) KS08_RS01965 PF02682 Carboxyltransferase domain, subdomain C and D KS08_RS01970 PF02626 Carboxyltransferase domain, subdomain A and B KS08_RS01975 PF01614 Bacterial transcriptional regulator KS08_RS01975 PF09339 IclR helix-turn-helix domain KS08_RS01980 PF13472 GDSL-like Lipase/Acylhydrolase family KS08_RS01985 PF13129 Protein of unknown function (DUF3953) KS08_RS01990 PF03992 Antibiotic biosynthesis monooxygenase KS08_RS01995 PF05223 NTF2-like N-terminal transpeptidase domain KS08_RS01995 PF03717 Penicillin-binding Protein dimerisation domain KS08_RS01995 PF00905 Penicillin binding protein transpeptidase domain KS08_RS02000 PF00248 Aldo/keto reductase family KS08_RS02005 PF08279 HTH domain KS08_RS02005 PF00874 PRD domain KS08_RS02005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KS08_RS02005 PF05043 Mga helix-turn-helix domain KS08_RS02005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS08_RS02010 PF00501 AMP-binding enzyme KS08_RS02010 PF13193 AMP-binding enzyme C-terminal domain KS08_RS02025 PF13302 Acetyltransferase (GNAT) domain KS08_RS02030 PF16242 Pyridoxamine 5'-phosphate oxidase like KS08_RS02035 PF10997 Alternate to MurJ KS08_RS02040 PF12823 Domain of unknown function (DUF3817) KS08_RS02045 PF01037 Lrp/AsnC ligand binding domain KS08_RS02050 PF01131 DNA topoisomerase KS08_RS02050 PF01751 Toprim domain KS08_RS02060 PF00990 Diguanylate cyclase, GGDEF domain KS08_RS02065 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KS08_RS02075 PF03170 Bacterial cellulose synthase subunit KS08_RS02080 PF13520 Amino acid permease KS08_RS02085 PF00205 Thiamine pyrophosphate enzyme, central domain KS08_RS02085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KS08_RS02085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KS08_RS02095 PF01476 LysM domain KS08_RS02095 PF05257 CHAP domain KS08_RS02115 PF18801 response regulator aspartate phosphatase H, N terminal KS08_RS02115 PF13176 Tetratricopeptide repeat KS08_RS02120 PF10676 Spore germination protein gerPA/gerPF KS08_RS02130 PF01566 Natural resistance-associated macrophage protein KS08_RS02145 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KS08_RS02150 PF17314 Family of unknown function (DUF5360) KS08_RS02155 PF00893 Small Multidrug Resistance protein KS08_RS02160 PF12787 EcsC protein family KS08_RS02165 PF00477 Small hydrophilic plant seed protein KS08_RS02165 PF10685 Stress-induced bacterial acidophilic repeat motif KS08_RS02170 PF07883 Cupin domain KS08_RS02175 PF16291 Domain of unknown function (DUF4937 KS08_RS02180 PF05067 Manganese containing catalase KS08_RS02185 PF03480 Bacterial extracellular solute-binding protein, family 7 KS08_RS02190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KS08_RS02190 PF17203 Single cache domain 3 KS08_RS02190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS02195 PF08279 HTH domain KS08_RS02195 PF00072 Response regulator receiver domain KS08_RS02200 PF00375 Sodium:dicarboxylate symporter family KS08_RS02205 PF01594 AI-2E family transporter KS08_RS02210 PF00005 ABC transporter KS08_RS02225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KS08_RS02225 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KS08_RS02225 PF02770 Acyl-CoA dehydrogenase, middle domain KS08_RS02235 PF16916 Dimerisation domain of Zinc Transporter KS08_RS02235 PF01545 Cation efflux family KS08_RS02240 PF00085 Thioredoxin KS08_RS02245 PF07478 D-ala D-ala ligase C-terminus KS08_RS02245 PF01820 D-ala D-ala ligase N-terminus KS08_RS02250 PF01225 Mur ligase family, catalytic domain KS08_RS02250 PF02875 Mur ligase family, glutamate ligase domain KS08_RS02250 PF08245 Mur ligase middle domain KS08_RS02255 PF00270 DEAD/DEAH box helicase KS08_RS02255 PF00271 Helicase conserved C-terminal domain KS08_RS02260 PF03703 Bacterial PH domain KS08_RS02265 PF03703 Bacterial PH domain KS08_RS02270 PF01694 Rhomboid family KS08_RS02275 PF01648 4'-phosphopantetheinyl transferase superfamily KS08_RS02285 PF01168 Alanine racemase, N-terminal domain KS08_RS02285 PF00842 Alanine racemase, C-terminal domain KS08_RS02290 PF01402 Ribbon-helix-helix protein, copG family KS08_RS02295 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KS08_RS02300 PF01740 STAS domain KS08_RS02300 PF08678 Rsbr N terminal KS08_RS02305 PF01740 STAS domain KS08_RS02310 PF13581 Histidine kinase-like ATPase domain KS08_RS02315 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain KS08_RS02315 PF07228 Stage II sporulation protein E (SpoIIE) KS08_RS02320 PF01740 STAS domain KS08_RS02325 PF13581 Histidine kinase-like ATPase domain KS08_RS02330 PF04539 Sigma-70 region 3 KS08_RS02330 PF04542 Sigma-70 region 2 KS08_RS02330 PF04545 Sigma-70, region 4 KS08_RS02335 PF07228 Stage II sporulation protein E (SpoIIE) KS08_RS02340 PF16921 Tex protein YqgF-like domain KS08_RS02340 PF00575 S1 RNA binding domain KS08_RS02340 PF17674 HHH domain KS08_RS02340 PF09371 Tex-like protein N-terminal domain KS08_RS02345 PF10263 SprT-like family KS08_RS02385 PF07859 alpha/beta hydrolase fold KS08_RS02390 PF02566 OsmC-like protein KS08_RS02395 PF01047 MarR family KS08_RS02405 PF00583 Acetyltransferase (GNAT) family KS08_RS02405 PF01047 MarR family KS08_RS02410 PF07690 Major Facilitator Superfamily KS08_RS02415 PF02156 Glycosyl hydrolase family 26 KS08_RS02435 PF02082 Transcriptional regulator KS08_RS02440 PF02525 Flavodoxin-like fold KS08_RS02445 PF00313 'Cold-shock' DNA-binding domain KS08_RS02450 PF01177 Asp/Glu/Hydantoin racemase KS08_RS02465 PF00155 Aminotransferase class I and II KS08_RS02465 PF00392 Bacterial regulatory proteins, gntR family KS08_RS02470 PF07690 Major Facilitator Superfamily KS08_RS02475 PF01734 Patatin-like phospholipase KS08_RS02485 PF01565 FAD binding domain KS08_RS02485 PF08031 Berberine and berberine like KS08_RS02495 PF16916 Dimerisation domain of Zinc Transporter KS08_RS02495 PF01545 Cation efflux family KS08_RS02505 PF07883 Cupin domain KS08_RS02510 PF00583 Acetyltransferase (GNAT) family KS08_RS02515 PF06445 GyrI-like small molecule binding domain KS08_RS02515 PF12833 Helix-turn-helix domain KS08_RS02525 PF04055 Radical SAM superfamily KS08_RS02540 PF00107 Zinc-binding dehydrogenase KS08_RS02540 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS02545 PF13411 MerR HTH family regulatory protein KS08_RS02555 PF00155 Aminotransferase class I and II KS08_RS02555 PF00392 Bacterial regulatory proteins, gntR family KS08_RS02560 PF04299 Putative FMN-binding domain KS08_RS02565 PF07690 Major Facilitator Superfamily KS08_RS02570 PF00440 Bacterial regulatory proteins, tetR family KS08_RS02570 PF16859 Tetracyclin repressor-like, C-terminal domain KS08_RS02575 PF00892 EamA-like transporter family KS08_RS02580 PF00392 Bacterial regulatory proteins, gntR family KS08_RS02580 PF00155 Aminotransferase class I and II KS08_RS02585 PF07875 Coat F domain KS08_RS02595 PF13823 Alcohol dehydrogenase GroES-associated KS08_RS02595 PF00107 Zinc-binding dehydrogenase KS08_RS02595 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS02600 PF07875 Coat F domain KS08_RS02610 PF03176 MMPL family KS08_RS02615 PF07722 Peptidase C26 KS08_RS02620 PF00005 ABC transporter KS08_RS02620 PF12848 ABC transporter KS08_RS02625 PF13302 Acetyltransferase (GNAT) domain KS08_RS02630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS08_RS02630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS08_RS02635 PF00465 Iron-containing alcohol dehydrogenase KS08_RS02640 PF07690 Major Facilitator Superfamily KS08_RS02645 PF02801 Beta-ketoacyl synthase, C-terminal domain KS08_RS02645 PF00109 Beta-ketoacyl synthase, N-terminal domain KS08_RS02655 PF01925 Sulfite exporter TauE/SafE KS08_RS02660 PF00583 Acetyltransferase (GNAT) family KS08_RS02665 PF06445 GyrI-like small molecule binding domain KS08_RS02665 PF13411 MerR HTH family regulatory protein KS08_RS02670 PF00892 EamA-like transporter family KS08_RS02675 PF00293 NUDIX domain KS08_RS02680 PF00561 alpha/beta hydrolase fold KS08_RS02685 PF00180 Isocitrate/isopropylmalate dehydrogenase KS08_RS02690 PF07729 FCD domain KS08_RS02690 PF00392 Bacterial regulatory proteins, gntR family KS08_RS02695 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KS08_RS02705 PF11954 Domain of unknown function (DUF3471) KS08_RS02705 PF00144 Beta-lactamase KS08_RS02710 PF07563 Protein of unknown function (DUF1541) KS08_RS02715 PF07690 Major Facilitator Superfamily KS08_RS02720 PF07702 UTRA domain KS08_RS02720 PF00392 Bacterial regulatory proteins, gntR family KS08_RS02725 PF00392 Bacterial regulatory proteins, gntR family KS08_RS02725 PF07729 FCD domain KS08_RS02730 PF07690 Major Facilitator Superfamily KS08_RS02735 PF00893 Small Multidrug Resistance protein KS08_RS02740 PF00893 Small Multidrug Resistance protein KS08_RS02745 PF00440 Bacterial regulatory proteins, tetR family KS08_RS02745 PF17934 Tetracyclin repressor-like, C-terminal domain KS08_RS02750 PF13520 Amino acid permease KS08_RS02760 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KS08_RS02765 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS02765 PF00107 Zinc-binding dehydrogenase KS08_RS02770 PF00083 Sugar (and other) transporter KS08_RS02810 PF02769 AIR synthase related protein, C-terminal domain KS08_RS02810 PF00586 AIR synthase related protein, N-terminal domain KS08_RS02815 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KS08_RS02820 PF00814 Glycoprotease family KS08_RS02825 PF00583 Acetyltransferase (GNAT) family KS08_RS02830 PF00814 Glycoprotease family KS08_RS02835 PF00005 ABC transporter KS08_RS02835 PF12848 ABC transporter KS08_RS02835 PF16326 ABC transporter C-terminal domain KS08_RS02840 PF01967 MoaC family KS08_RS02845 PF02629 CoA binding domain KS08_RS02845 PF06971 Putative DNA-binding protein N-terminus KS08_RS02850 PF02416 mttA/Hcf106 family KS08_RS02855 PF00902 Sec-independent protein translocase protein (TatC) KS08_RS02860 PF14146 Domain of unknown function (DUF4305) KS08_RS02865 PF02517 CPBP intramembrane metalloprotease KS08_RS02870 PF00166 Chaperonin 10 Kd subunit KS08_RS02875 PF00118 TCP-1/cpn60 chaperonin family KS08_RS02880 PF01471 Putative peptidoglycan binding domain KS08_RS02880 PF08924 Domain of unknown function (DUF1906) KS08_RS02895 PF00931 NB-ARC domain KS08_RS02895 PF13176 Tetratricopeptide repeat KS08_RS02900 PF00107 Zinc-binding dehydrogenase KS08_RS02900 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS02910 PF00294 pfkB family carbohydrate kinase KS08_RS02915 PF14154 Domain of unknown function (DUF4306) KS08_RS02920 PF04012 PspA/IM30 family KS08_RS02925 PF08271 TFIIB zinc-binding KS08_RS02930 PF04536 TPM domain KS08_RS02935 PF13421 SPFH domain-Band 7 family KS08_RS02940 PF01757 Acyltransferase family KS08_RS02945 PF11738 Protein of unknown function (DUF3298) KS08_RS02945 PF13739 Deacetylase PdaC KS08_RS02950 PF04542 Sigma-70 region 2 KS08_RS02950 PF08281 Sigma-70, region 4 KS08_RS02955 PF00107 Zinc-binding dehydrogenase KS08_RS02955 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS02960 PF03330 Lytic transglycolase KS08_RS02965 PF07676 WD40-like Beta Propeller Repeat KS08_RS02975 PF14169 Cold-inducible protein YdjO KS08_RS02980 PF00394 Multicopper oxidase KS08_RS02980 PF07731 Multicopper oxidase KS08_RS02980 PF07732 Multicopper oxidase KS08_RS02985 PF00324 Amino acid permease KS08_RS02995 PF16916 Dimerisation domain of Zinc Transporter KS08_RS02995 PF01545 Cation efflux family KS08_RS03000 PF17863 AAA lid domain KS08_RS03000 PF07726 ATPase family associated with various cellular activities (AAA) KS08_RS03005 PF01882 Protein of unknown function DUF58 KS08_RS03010 PF13559 Domain of unknown function (DUF4129) KS08_RS03010 PF01841 Transglutaminase-like superfamily KS08_RS03010 PF11992 Domain of unknown function (DUF3488) KS08_RS03015 PF00117 Glutamine amidotransferase class-I KS08_RS03015 PF00958 GMP synthase C terminal domain KS08_RS03015 PF02540 NAD synthase KS08_RS03020 PF04545 Sigma-70, region 4 KS08_RS03020 PF04542 Sigma-70 region 2 KS08_RS03030 PF00860 Permease family KS08_RS03040 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS08_RS03045 PF14044 NETI protein KS08_RS03050 PF00731 AIR carboxylase KS08_RS03055 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KS08_RS03055 PF02222 ATP-grasp domain KS08_RS03060 PF10397 Adenylosuccinate lyase C-terminus KS08_RS03060 PF00206 Lyase KS08_RS03065 PF01259 SAICAR synthetase KS08_RS03070 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KS08_RS03080 PF02769 AIR synthase related protein, C-terminal domain KS08_RS03080 PF00586 AIR synthase related protein, N-terminal domain KS08_RS03080 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KS08_RS03085 PF00156 Phosphoribosyl transferase domain KS08_RS03090 PF02769 AIR synthase related protein, C-terminal domain KS08_RS03090 PF00586 AIR synthase related protein, N-terminal domain KS08_RS03095 PF00551 Formyl transferase KS08_RS03100 PF01808 AICARFT/IMPCHase bienzyme KS08_RS03100 PF02142 MGS-like domain KS08_RS03105 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KS08_RS03105 PF02843 Phosphoribosylglycinamide synthetase, C domain KS08_RS03105 PF02844 Phosphoribosylglycinamide synthetase, N domain KS08_RS03110 PF01037 Lrp/AsnC ligand binding domain KS08_RS03115 PF13520 Amino acid permease KS08_RS03120 PF11127 Protein of unknown function (DUF2892) KS08_RS03125 PF01979 Amidohydrolase family KS08_RS03125 PF13382 Adenine deaminase C-terminal domain KS08_RS03130 PF17479 Protein of unknown function (DUF3048) C-terminal domain KS08_RS03130 PF11258 Protein of unknown function (DUF3048) N-terminal domain KS08_RS03135 PF01371 Trp repressor protein KS08_RS03140 PF01645 Conserved region in glutamate synthase KS08_RS03150 PF01884 PcrB family KS08_RS03155 PF13361 UvrD-like helicase C-terminal domain KS08_RS03155 PF00580 UvrD/REP helicase N-terminal domain KS08_RS03160 PF00533 BRCA1 C Terminus (BRCT) domain KS08_RS03160 PF01653 NAD-dependent DNA ligase adenylation domain KS08_RS03160 PF12826 Helix-hairpin-helix motif KS08_RS03160 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KS08_RS03160 PF03120 NAD-dependent DNA ligase OB-fold domain KS08_RS03165 PF07537 CamS sex pheromone cAM373 precursor KS08_RS03170 PF01636 Phosphotransferase enzyme family KS08_RS03175 PF02308 MgtC family KS08_RS03180 PF00474 Sodium:solute symporter family KS08_RS03185 PF02686 Glu-tRNAGln amidotransferase C subunit KS08_RS03190 PF01425 Amidase KS08_RS03195 PF02637 GatB domain KS08_RS03195 PF02934 GatB/GatE catalytic domain KS08_RS03200 PF00440 Bacterial regulatory proteins, tetR family KS08_RS03205 PF00873 AcrB/AcrD/AcrF family KS08_RS03210 PF00781 Diacylglycerol kinase catalytic domain KS08_RS03215 PF05958 tRNA (Uracil-5-)-methyltransferase KS08_RS03215 PF01938 TRAM domain KS08_RS03225 PF00005 ABC transporter KS08_RS03240 PF04634 Protein of unknown function, DUF600 KS08_RS03245 PF04634 Protein of unknown function, DUF600 KS08_RS03250 PF04740 LXG domain of WXG superfamily KS08_RS03255 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KS08_RS03255 PF04740 LXG domain of WXG superfamily KS08_RS03260 PF01709 Transcriptional regulator KS08_RS03270 PF04439 Streptomycin adenylyltransferase KS08_RS03275 PF11007 Spore coat associated protein JA (CotJA) KS08_RS03280 PF12652 CotJB protein KS08_RS03285 PF05067 Manganese containing catalase KS08_RS03290 PF00583 Acetyltransferase (GNAT) family KS08_RS03300 PF04239 Protein of unknown function (DUF421) KS08_RS03305 PF03992 Antibiotic biosynthesis monooxygenase KS08_RS03310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS03315 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KS08_RS03315 PF01740 STAS domain KS08_RS03320 PF01687 Riboflavin kinase KS08_RS03325 PF01027 Inhibitor of apoptosis-promoting Bax1 KS08_RS03330 PF01047 MarR family KS08_RS03335 PF01494 FAD binding domain KS08_RS03340 PF13037 Domain of unknown function (DUF3898) KS08_RS03340 PF13039 Protein of unknown function (DUF3900) KS08_RS03345 PF00258 Flavodoxin KS08_RS03345 PF00067 Cytochrome P450 KS08_RS03345 PF00667 FAD binding domain KS08_RS03345 PF00175 Oxidoreductase NAD-binding domain KS08_RS03355 PF00884 Sulfatase KS08_RS03360 PF00483 Nucleotidyl transferase KS08_RS03365 PF16363 GDP-mannose 4,6 dehydratase KS08_RS03370 PF03407 Nucleotide-diphospho-sugar transferase KS08_RS03375 PF00535 Glycosyl transferase family 2 KS08_RS03380 PF03407 Nucleotide-diphospho-sugar transferase KS08_RS03385 PF07690 Major Facilitator Superfamily KS08_RS03390 PF13520 Amino acid permease KS08_RS03395 PF00171 Aldehyde dehydrogenase family KS08_RS03400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS08_RS03410 PF13181 Tetratricopeptide repeat KS08_RS03410 PF00535 Glycosyl transferase family 2 KS08_RS03415 PF16326 ABC transporter C-terminal domain KS08_RS03415 PF12848 ABC transporter KS08_RS03415 PF00005 ABC transporter KS08_RS03420 PF13411 MerR HTH family regulatory protein KS08_RS03425 PF07690 Major Facilitator Superfamily KS08_RS03430 PF12848 ABC transporter KS08_RS03430 PF00005 ABC transporter KS08_RS03435 PF00270 DEAD/DEAH box helicase KS08_RS03435 PF00271 Helicase conserved C-terminal domain KS08_RS03440 PF00107 Zinc-binding dehydrogenase KS08_RS03440 PF16884 N-terminal domain of oxidoreductase KS08_RS03445 PF11486 Protein of unknown function (DUF3212) KS08_RS03450 PF11181 Heat induced stress protein YflT KS08_RS03455 PF00544 Pectate lyase KS08_RS03460 PF00939 Sodium:sulfate symporter transmembrane region KS08_RS03480 PF06580 Histidine kinase KS08_RS03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS03485 PF00072 Response regulator receiver domain KS08_RS03485 PF04397 LytTr DNA-binding domain KS08_RS03495 PF04203 Sortase domain KS08_RS03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS03500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KS08_RS03505 PF08279 HTH domain KS08_RS03505 PF00072 Response regulator receiver domain KS08_RS03505 PF12431 Transcriptional regulator KS08_RS03510 PF03401 Tripartite tricarboxylate transporter family receptor KS08_RS03515 PF03600 Citrate transporter KS08_RS03520 PF00753 Metallo-beta-lactamase superfamily KS08_RS03525 PF02898 Nitric oxide synthase, oxygenase domain KS08_RS03530 PF00708 Acylphosphatase KS08_RS03535 PF03473 MOSC domain KS08_RS03535 PF03475 3-alpha domain KS08_RS03540 PF11588 Protein of unknown function (DUF3243) KS08_RS03545 PF00557 Metallopeptidase family M24 KS08_RS03550 PF00367 phosphotransferase system, EIIB KS08_RS03550 PF02378 Phosphotransferase system, EIIC KS08_RS03555 PF10787 Uncharacterised protein from bacillus cereus group KS08_RS03560 PF00884 Sulfatase KS08_RS03565 PF09350 Domain of unknown function (DUF1992) KS08_RS03570 PF00011 Hsp20/alpha crystallin family KS08_RS03575 PF10676 Spore germination protein gerPA/gerPF KS08_RS03580 PF10676 Spore germination protein gerPA/gerPF KS08_RS03585 PF02378 Phosphotransferase system, EIIC KS08_RS03585 PF00367 phosphotransferase system, EIIB KS08_RS03590 PF00128 Alpha amylase, catalytic domain KS08_RS03590 PF16657 Maltogenic Amylase, C-terminal domain KS08_RS03595 PF07702 UTRA domain KS08_RS03595 PF00392 Bacterial regulatory proteins, gntR family KS08_RS03600 PF00881 Nitroreductase family KS08_RS03615 PF00149 Calcineurin-like phosphoesterase KS08_RS03615 PF02872 5'-nucleotidase, C-terminal domain KS08_RS03620 PF01965 DJ-1/PfpI family KS08_RS03625 PF00356 Bacterial regulatory proteins, lacI family KS08_RS03630 PF08501 Shikimate dehydrogenase substrate binding domain KS08_RS03630 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KS08_RS03635 PF01487 Type I 3-dehydroquinase KS08_RS03640 PF07690 Major Facilitator Superfamily KS08_RS03645 PF06569 Protein of unknown function (DUF1128) KS08_RS03650 PF01451 Low molecular weight phosphotyrosine protein phosphatase KS08_RS03660 PF03631 Virulence factor BrkB KS08_RS03665 PF07690 Major Facilitator Superfamily KS08_RS03670 PF01699 Sodium/calcium exchanger protein KS08_RS03675 PF14167 YfkD-like protein KS08_RS03680 PF00924 Mechanosensitive ion channel KS08_RS03685 PF08756 YfkB-like domain KS08_RS03685 PF04055 Radical SAM superfamily KS08_RS03695 PF01522 Polysaccharide deacetylase KS08_RS03700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KS08_RS03700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KS08_RS03710 PF01544 CorA-like Mg2+ transporter protein KS08_RS03715 PF00730 HhH-GPD superfamily base excision DNA repair protein KS08_RS03720 PF01938 TRAM domain KS08_RS03720 PF05958 tRNA (Uracil-5-)-methyltransferase KS08_RS03730 PF00082 Subtilase family KS08_RS03735 PF00664 ABC transporter transmembrane region KS08_RS03735 PF00005 ABC transporter KS08_RS03740 PF00069 Protein kinase domain KS08_RS03745 PF14118 YfzA-like protein KS08_RS03750 PF01207 Dihydrouridine synthase (Dus) KS08_RS03760 PF00676 Dehydrogenase E1 component KS08_RS03765 PF02779 Transketolase, pyrimidine binding domain KS08_RS03765 PF02780 Transketolase, C-terminal domain KS08_RS03770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KS08_RS03770 PF02817 e3 binding domain KS08_RS03770 PF00364 Biotin-requiring enzyme KS08_RS03775 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS03775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KS08_RS03780 PF02954 Bacterial regulatory protein, Fis family KS08_RS03780 PF01590 GAF domain KS08_RS03780 PF00158 Sigma-54 interaction domain KS08_RS03785 PF08141 Small acid-soluble spore protein H family KS08_RS03790 PF02056 Family 4 glycosyl hydrolase KS08_RS03790 PF11975 Family 4 glycosyl hydrolase C-terminal domain KS08_RS03795 PF01418 Helix-turn-helix domain, rpiR family KS08_RS03795 PF01380 SIS domain KS08_RS03800 PF00367 phosphotransferase system, EIIB KS08_RS03800 PF02378 Phosphotransferase system, EIIC KS08_RS03805 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KS08_RS03805 PF12708 Pectate lyase superfamily protein KS08_RS03810 PF00664 ABC transporter transmembrane region KS08_RS03810 PF00005 ABC transporter KS08_RS03815 PF00005 ABC transporter KS08_RS03815 PF00664 ABC transporter transmembrane region KS08_RS03820 PF07681 DoxX KS08_RS03825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS03835 PF03551 Transcriptional regulator PadR-like family KS08_RS03835 PF10400 Virulence activator alpha C-term KS08_RS03840 PF02525 Flavodoxin-like fold KS08_RS03845 PF01757 Acyltransferase family KS08_RS03850 PF01337 Barstar (barnase inhibitor) KS08_RS03855 PF12867 DinB superfamily KS08_RS03860 PF07690 Major Facilitator Superfamily KS08_RS03865 PF01047 MarR family KS08_RS03870 PF03706 Lysylphosphatidylglycerol synthase TM region KS08_RS03870 PF09924 Uncharacterised conserved protein (DUF2156) KS08_RS03875 PF02567 Phenazine biosynthesis-like protein KS08_RS03880 PF00881 Nitroreductase family KS08_RS03885 PF14151 YfhD-like protein KS08_RS03890 PF01370 NAD dependent epimerase/dehydratase family KS08_RS03890 PF08338 Domain of unknown function (DUF1731) KS08_RS03895 PF02631 RecX family KS08_RS03900 PF08838 Protein of unknown function (DUF1811) KS08_RS03905 PF07690 Major Facilitator Superfamily KS08_RS03910 PF10794 Protein of unknown function (DUF2606) KS08_RS03915 PF00089 Trypsin KS08_RS03920 PF08176 Small acid-soluble spore protein K family KS08_RS03925 PF14043 WVELL protein KS08_RS03930 PF08239 Bacterial SH3 domain KS08_RS03935 PF13630 SdpI/YhfL protein family KS08_RS03940 PF00561 alpha/beta hydrolase fold KS08_RS03945 PF00535 Glycosyl transferase family 2 KS08_RS03950 PF09586 Bacterial membrane protein YfhO KS08_RS03955 PF04307 LexA-binding, inner membrane-associated putative hydrolase KS08_RS03960 PF14815 NUDIX domain KS08_RS03960 PF00730 HhH-GPD superfamily base excision DNA repair protein KS08_RS03975 PF04259 Small, acid-soluble spore protein, gamma-type KS08_RS03980 PF14182 YgaB-like protein KS08_RS03985 PF04167 Protein of unknown function (DUF402) KS08_RS03990 PF00664 ABC transporter transmembrane region KS08_RS03990 PF00005 ABC transporter KS08_RS03995 PF06081 Aromatic acid exporter family member 1 KS08_RS04000 PF00202 Aminotransferase class-III KS08_RS04005 PF00578 AhpC/TSA family KS08_RS04010 PF01475 Ferric uptake regulator family KS08_RS04015 PF11023 Zinc-ribbon containing domain KS08_RS04020 PF14540 Nucleotidyltransferase-like KS08_RS04020 PF18576 Helix-turn-helix domain KS08_RS04120 PF03553 Na+/H+ antiporter family KS08_RS04125 PF03575 Peptidase family S51 KS08_RS04130 PF13667 ThiC-associated domain KS08_RS04130 PF01964 Radical SAM ThiC family KS08_RS04135 PF08031 Berberine and berberine like KS08_RS04135 PF01565 FAD binding domain KS08_RS04140 PF13040 Fur-regulated basic protein B KS08_RS04145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KS08_RS04150 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS04155 PF12911 N-terminal TM domain of oligopeptide transport permease C KS08_RS04155 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS04160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS08_RS04160 PF00005 ABC transporter KS08_RS04165 PF00005 ABC transporter KS08_RS04165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS08_RS04170 PF06628 Catalase-related immune-responsive KS08_RS04170 PF00199 Catalase KS08_RS04180 PF00005 ABC transporter KS08_RS04185 PF09084 NMT1/THI5 like KS08_RS04190 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS04195 PF00296 Luciferase-like monooxygenase KS08_RS04210 PF00253 Ribosomal protein S14p/S29e KS08_RS04220 PF01381 Helix-turn-helix KS08_RS04235 PF08331 Domain of unknown function (DUF1730) KS08_RS04240 PF12671 Putative amidase domain KS08_RS04245 PF00588 SpoU rRNA Methylase family KS08_RS04250 PF13171 Protein of unknown function (DUF4004) KS08_RS04255 PF04519 Polymer-forming cytoskeletal KS08_RS04265 PF08298 PrkA AAA domain KS08_RS04265 PF06798 PrkA serine protein kinase C-terminal domain KS08_RS04270 PF04285 Protein of unknown function (DUF444) KS08_RS04275 PF01047 MarR family KS08_RS04285 PF07690 Major Facilitator Superfamily KS08_RS04290 PF03358 NADPH-dependent FMN reductase KS08_RS04305 PF00392 Bacterial regulatory proteins, gntR family KS08_RS04310 PF00005 ABC transporter KS08_RS04315 PF00005 ABC transporter KS08_RS04320 PF12679 ABC-2 family transporter protein KS08_RS04325 PF00313 'Cold-shock' DNA-binding domain KS08_RS04330 PF03180 NLPA lipoprotein KS08_RS04335 PF00990 Diguanylate cyclase, GGDEF domain KS08_RS04335 PF07694 5TMR of 5TMR-LYT KS08_RS04340 PF00375 Sodium:dicarboxylate symporter family KS08_RS04345 PF01546 Peptidase family M20/M25/M40 KS08_RS04355 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KS08_RS04365 PF07875 Coat F domain KS08_RS04370 PF02872 5'-nucleotidase, C-terminal domain KS08_RS04370 PF00746 LPXTG cell wall anchor motif KS08_RS04370 PF00149 Calcineurin-like phosphoesterase KS08_RS04370 PF00565 Staphylococcal nuclease homologue KS08_RS04375 PF04203 Sortase domain KS08_RS04380 PF01479 S4 domain KS08_RS04380 PF00849 RNA pseudouridylate synthase KS08_RS04385 PF17326 Family of unknown function (DUF5365) KS08_RS04390 PF00571 CBS domain KS08_RS04395 PF13419 Haloacid dehalogenase-like hydrolase KS08_RS04400 PF00795 Carbon-nitrogen hydrolase KS08_RS04400 PF00583 Acetyltransferase (GNAT) family KS08_RS04405 PF00202 Aminotransferase class-III KS08_RS04410 PF04309 Glycerol-3-phosphate responsive antiterminator KS08_RS04415 PF00230 Major intrinsic protein KS08_RS04420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KS08_RS04420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KS08_RS04425 PF01266 FAD dependent oxidoreductase KS08_RS04425 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KS08_RS04430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KS08_RS04430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KS08_RS04430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KS08_RS04430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KS08_RS04435 PF07730 Histidine kinase KS08_RS04435 PF13185 GAF domain KS08_RS04440 PF00072 Response regulator receiver domain KS08_RS04440 PF00196 Bacterial regulatory proteins, luxR family KS08_RS04445 PF03358 NADPH-dependent FMN reductase KS08_RS04450 PF14148 YhdB-like protein KS08_RS04455 PF13028 Protein of unknown function (DUF3889) KS08_RS04460 PF00877 NlpC/P60 family KS08_RS04460 PF01476 LysM domain KS08_RS04465 PF02082 Transcriptional regulator KS08_RS04470 PF05552 Conserved TM helix KS08_RS04475 PF04293 SpoVR like protein KS08_RS04480 PF00245 Alkaline phosphatase KS08_RS04485 PF00877 NlpC/P60 family KS08_RS04485 PF01476 LysM domain KS08_RS04490 PF03466 LysR substrate binding domain KS08_RS04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS04495 PF00285 Citrate synthase, C-terminal domain KS08_RS04505 PF13520 Amino acid permease KS08_RS04510 PF00209 Sodium:neurotransmitter symporter family KS08_RS04515 PF17453 Sigma-M inhibitor KS08_RS04520 PF13800 Sigma factor regulator N-terminal KS08_RS04520 PF13791 Sigma factor regulator C-terminal KS08_RS04525 PF08281 Sigma-70, region 4 KS08_RS04525 PF04542 Sigma-70 region 2 KS08_RS04530 PF01553 Acyltransferase KS08_RS04535 PF00571 CBS domain KS08_RS04535 PF03471 Transporter associated domain KS08_RS04535 PF01595 Cyclin M transmembrane N-terminal domain KS08_RS04540 PF13411 MerR HTH family regulatory protein KS08_RS04545 PF00155 Aminotransferase class I and II KS08_RS04550 PF02801 Beta-ketoacyl synthase, C-terminal domain KS08_RS04550 PF00109 Beta-ketoacyl synthase, N-terminal domain KS08_RS04555 PF00571 CBS domain KS08_RS04555 PF01595 Cyclin M transmembrane N-terminal domain KS08_RS04555 PF03471 Transporter associated domain KS08_RS04560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KS08_RS04565 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KS08_RS04570 PF03009 Glycerophosphoryl diester phosphodiesterase family KS08_RS04575 PF00924 Mechanosensitive ion channel KS08_RS04580 PF02146 Sir2 family KS08_RS04585 PF01522 Polysaccharide deacetylase KS08_RS04590 PF01063 Amino-transferase class IV KS08_RS04595 PF00440 Bacterial regulatory proteins, tetR family KS08_RS04595 PF13977 BetI-type transcriptional repressor, C-terminal KS08_RS04605 PF00582 Universal stress protein family KS08_RS04610 PF00664 ABC transporter transmembrane region KS08_RS04610 PF00005 ABC transporter KS08_RS04615 PF00664 ABC transporter transmembrane region KS08_RS04615 PF00005 ABC transporter KS08_RS04620 PF13460 NAD(P)H-binding KS08_RS04625 PF00269 Small, acid-soluble spore proteins, alpha/beta type KS08_RS04635 PF17277 Family of unknown function (DUF5342) KS08_RS04640 PF14398 YheC/D like ATP-grasp KS08_RS04645 PF14398 YheC/D like ATP-grasp KS08_RS04650 PF04286 Protein of unknown function (DUF445) KS08_RS04655 PF06133 Control of competence regulator ComK, YlbF/YmcA KS08_RS04665 PF04055 Radical SAM superfamily KS08_RS04670 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KS08_RS04675 PF00999 Sodium/hydrogen exchanger family KS08_RS04680 PF02080 TrkA-C domain KS08_RS04690 PF00378 Enoyl-CoA hydratase/isomerase KS08_RS04695 PF14120 YhzD-like protein KS08_RS04700 PF13732 Domain of unknown function (DUF4162) KS08_RS04700 PF00005 ABC transporter KS08_RS04710 PF00149 Calcineurin-like phosphoesterase KS08_RS04715 PF13514 AAA domain KS08_RS04720 PF01966 HD domain KS08_RS04725 PF14147 Sporulation protein YhaL KS08_RS04740 PF09680 Family of unknown function KS08_RS04750 PF11667 Putative zincin peptidase KS08_RS04755 PF08963 Protein of unknown function (DUF1878) KS08_RS04760 PF01047 MarR family KS08_RS04765 PF12732 YtxH-like protein KS08_RS04775 PF17099 Tryptophan transporter TrpP KS08_RS04780 PF00266 Aminotransferase class-V KS08_RS04785 PF01230 HIT domain KS08_RS04790 PF00005 ABC transporter KS08_RS04795 PF05975 Bacterial ABC transporter protein EcsB KS08_RS04800 PF12787 EcsC protein family KS08_RS04805 PF07687 Peptidase dimerisation domain KS08_RS04805 PF01546 Peptidase family M20/M25/M40 KS08_RS04815 PF03992 Antibiotic biosynthesis monooxygenase KS08_RS04820 PF00905 Penicillin binding protein transpeptidase domain KS08_RS04820 PF00912 Transglycosylase KS08_RS04825 PF01208 Uroporphyrinogen decarboxylase (URO-D) KS08_RS04830 PF00762 Ferrochelatase KS08_RS04835 PF01593 Flavin containing amine oxidoreductase KS08_RS04840 PF17932 Tetracyclin repressor-like, C-terminal domain KS08_RS04840 PF00440 Bacterial regulatory proteins, tetR family KS08_RS04850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KS08_RS04850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KS08_RS04860 PF05343 M42 glutamyl aminopeptidase KS08_RS04865 PF00375 Sodium:dicarboxylate symporter family KS08_RS04870 PF12706 Beta-lactamase superfamily domain KS08_RS04875 PF10437 Bacterial lipoate protein ligase C-terminus KS08_RS04875 PF03099 Biotin/lipoate A/B protein ligase family KS08_RS04880 PF13460 NAD(P)H-binding KS08_RS04885 PF13193 AMP-binding enzyme C-terminal domain KS08_RS04885 PF00501 AMP-binding enzyme KS08_RS04895 PF16491 CAAX prenyl protease N-terminal, five membrane helices KS08_RS04895 PF01435 Peptidase family M48 KS08_RS04900 PF05922 Peptidase inhibitor I9 KS08_RS04900 PF00082 Subtilase family KS08_RS04905 PF01497 Periplasmic binding protein KS08_RS04910 PF00300 Histidine phosphatase superfamily (branch 1) KS08_RS04915 PF00108 Thiolase, N-terminal domain KS08_RS04915 PF02803 Thiolase, C-terminal domain KS08_RS04920 PF00501 AMP-binding enzyme KS08_RS04920 PF13193 AMP-binding enzyme C-terminal domain KS08_RS04925 PF02632 BioY family KS08_RS04930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS08_RS04935 PF01266 FAD dependent oxidoreductase KS08_RS04935 PF00355 Rieske [2Fe-2S] domain KS08_RS04945 PF08858 IDEAL domain KS08_RS04950 PF06338 ComK protein KS08_RS04955 PF08818 Domain of unknown function (DU1801) KS08_RS04965 PF15493 Domain of unknown function, YrpD KS08_RS04970 PF05901 Excalibur calcium-binding domain KS08_RS04975 PF01906 Putative heavy-metal-binding KS08_RS04980 PF00474 Sodium:solute symporter family KS08_RS04985 PF11755 Protein of unknown function (DUF3311) KS08_RS04995 PF09335 SNARE associated Golgi protein KS08_RS05000 PF10502 Signal peptidase, peptidase S26 KS08_RS05005 PF01494 FAD binding domain KS08_RS05010 PF01047 MarR family KS08_RS05015 PF05145 Transition state regulatory protein AbrB KS08_RS05020 PF07690 Major Facilitator Superfamily KS08_RS05025 PF08361 MAATS-type transcriptional repressor, C-terminal region KS08_RS05025 PF00440 Bacterial regulatory proteins, tetR family KS08_RS05030 PF02915 Rubrerythrin KS08_RS05035 PF04239 Protein of unknown function (DUF421) KS08_RS05040 PF13361 UvrD-like helicase C-terminal domain KS08_RS05040 PF12705 PD-(D/E)XK nuclease superfamily KS08_RS05045 PF13361 UvrD-like helicase C-terminal domain KS08_RS05045 PF00580 UvrD/REP helicase N-terminal domain KS08_RS05045 PF12705 PD-(D/E)XK nuclease superfamily KS08_RS05050 PF00149 Calcineurin-like phosphoesterase KS08_RS05050 PF12320 Type 5 capsule protein repressor C-terminal domain KS08_RS05055 PF13476 AAA domain KS08_RS05065 PF10676 Spore germination protein gerPA/gerPF KS08_RS05070 PF10970 Spore germination protein GerPE KS08_RS05080 PF10737 Spore germination protein GerPC KS08_RS05085 PF10803 Spore germination GerPB KS08_RS05090 PF10676 Spore germination protein gerPA/gerPF KS08_RS05095 PF09388 Spo0E like sporulation regulatory protein KS08_RS05100 PF01557 Fumarylacetoacetate (FAA) hydrolase family KS08_RS05105 PF07457 Protein of unknown function (DUF1516) KS08_RS05110 PF17936 Bacterial Ig domain KS08_RS05110 PF00082 Subtilase family KS08_RS05115 PF10949 Protein of unknown function (DUF2777) KS08_RS05120 PF13537 Glutamine amidotransferase domain KS08_RS05120 PF00733 Asparagine synthase KS08_RS05130 PF01554 MatE KS08_RS05135 PF02311 AraC-like ligand binding domain KS08_RS05135 PF12833 Helix-turn-helix domain KS08_RS05140 PF00356 Bacterial regulatory proteins, lacI family KS08_RS05145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS08_RS05145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS08_RS05150 PF05163 DinB family KS08_RS05155 PF01810 LysE type translocator KS08_RS05160 PF00392 Bacterial regulatory proteins, gntR family KS08_RS05160 PF00155 Aminotransferase class I and II KS08_RS05165 PF13599 Pentapeptide repeats (9 copies) KS08_RS05170 PF13673 Acetyltransferase (GNAT) domain KS08_RS05175 PF02219 Methylenetetrahydrofolate reductase KS08_RS05175 PF02574 Homocysteine S-methyltransferase KS08_RS05180 PF04461 Protein of unknown function (DUF520) KS08_RS05185 PF13509 S1 domain KS08_RS05185 PF17783 CvfB-like winged helix domain KS08_RS05190 PF02608 ABC transporter substrate-binding protein PnrA-like KS08_RS05195 PF00672 HAMP domain KS08_RS05195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS08_RS05195 PF12729 Four helix bundle sensory module for signal transduction KS08_RS05200 PF00067 Cytochrome P450 KS08_RS05205 PF02645 Uncharacterised protein, DegV family COG1307 KS08_RS05210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS08_RS05210 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS08_RS05215 PF12690 Intracellular proteinase inhibitor KS08_RS05220 PF12758 Protein of unknown function (DUF3813) KS08_RS05230 PF00326 Prolyl oligopeptidase family KS08_RS05235 PF01883 Iron-sulfur cluster assembly protein KS08_RS05240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS05245 PF01565 FAD binding domain KS08_RS05250 PF07690 Major Facilitator Superfamily KS08_RS05255 PF01118 Semialdehyde dehydrogenase, NAD binding domain KS08_RS05255 PF02774 Semialdehyde dehydrogenase, dimerisation domain KS08_RS05260 PF01960 ArgJ family KS08_RS05265 PF00696 Amino acid kinase family KS08_RS05270 PF00202 Aminotransferase class-III KS08_RS05275 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KS08_RS05275 PF00117 Glutamine amidotransferase class-I KS08_RS05280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KS08_RS05280 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KS08_RS05285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KS08_RS05285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KS08_RS05290 PF14168 YjzC-like protein KS08_RS05295 PF11151 Protein of unknown function (DUF2929) KS08_RS05310 PF02608 ABC transporter substrate-binding protein PnrA-like KS08_RS05315 PF10815 ComZ KS08_RS05325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KS08_RS05325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KS08_RS05330 PF00109 Beta-ketoacyl synthase, N-terminal domain KS08_RS05330 PF02801 Beta-ketoacyl synthase, C-terminal domain KS08_RS05335 PF10026 Predicted Zn-dependent protease (DUF2268) KS08_RS05340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS08_RS05340 PF00005 ABC transporter KS08_RS05345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS08_RS05345 PF00005 ABC transporter KS08_RS05350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KS08_RS05355 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS05360 PF12911 N-terminal TM domain of oligopeptide transport permease C KS08_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS05365 PF12227 Protein of unknown function (DUF3603) KS08_RS05370 PF00579 tRNA synthetases class I (W and Y) KS08_RS05375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KS08_RS05380 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS05385 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS05385 PF12911 N-terminal TM domain of oligopeptide transport permease C KS08_RS05390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS08_RS05390 PF00005 ABC transporter KS08_RS05395 PF00005 ABC transporter KS08_RS05395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS08_RS05405 PF13508 Acetyltransferase (GNAT) domain KS08_RS05410 PF03960 ArsC family KS08_RS05415 PF03741 Integral membrane protein TerC family KS08_RS05420 PF05389 Negative regulator of genetic competence (MecA) KS08_RS05425 PF06054 Competence protein CoiA-like family KS08_RS05430 PF08439 Oligopeptidase F KS08_RS05430 PF01432 Peptidase family M3 KS08_RS05445 PF01152 Bacterial-like globin KS08_RS05450 PF01464 Transglycosylase SLT domain KS08_RS05455 PF01928 CYTH domain KS08_RS05465 PF04607 Region found in RelA / SpoT proteins KS08_RS05470 PF01513 ATP-NAD kinase KS08_RS05475 PF00849 RNA pseudouridylate synthase KS08_RS05480 PF00149 Calcineurin-like phosphoesterase KS08_RS05485 PF02254 TrkA-N domain KS08_RS05485 PF02080 TrkA-C domain KS08_RS05485 PF00999 Sodium/hydrogen exchanger family KS08_RS05490 PF03070 TENA/THI-4/PQQC family KS08_RS05495 PF02581 Thiamine monophosphate synthase KS08_RS05500 PF01266 FAD dependent oxidoreductase KS08_RS05505 PF02597 ThiS family KS08_RS05510 PF05690 Thiazole biosynthesis protein ThiG KS08_RS05515 PF00899 ThiF family KS08_RS05520 PF08543 Phosphomethylpyrimidine kinase KS08_RS05530 PF14153 Spore coat protein CotO KS08_RS05535 PF10612 Spore coat protein Z KS08_RS05540 PF10612 Spore coat protein Z KS08_RS05545 PF07552 Spore Coat Protein X and V domain KS08_RS05555 PF07552 Spore Coat Protein X and V domain KS08_RS05560 PF07098 Protein of unknown function (DUF1360) KS08_RS05575 PF14069 Stage VI sporulation protein F KS08_RS05580 PF13361 UvrD-like helicase C-terminal domain KS08_RS05580 PF00580 UvrD/REP helicase N-terminal domain KS08_RS05590 PF00753 Metallo-beta-lactamase superfamily KS08_RS05600 PF00005 ABC transporter KS08_RS05610 PF13673 Acetyltransferase (GNAT) domain KS08_RS05620 PF00756 Putative esterase KS08_RS05625 PF01053 Cys/Met metabolism PLP-dependent enzyme KS08_RS05630 PF01053 Cys/Met metabolism PLP-dependent enzyme KS08_RS05640 PF14659 Phage integrase, N-terminal SAM-like domain KS08_RS05640 PF00589 Phage integrase family KS08_RS05645 PF06114 IrrE N-terminal-like domain KS08_RS05650 PF14470 Bacterial PH domain KS08_RS05655 PF00565 Staphylococcal nuclease homologue KS08_RS05655 PF05901 Excalibur calcium-binding domain KS08_RS05660 PF01381 Helix-turn-helix KS08_RS05675 PF01381 Helix-turn-helix KS08_RS05680 PF17448 Uncharacterized YqaH-like KS08_RS05685 PF09466 Hypothetical protein Yqai KS08_RS05710 PF07261 Replication initiation and membrane attachment KS08_RS05715 PF01695 IstB-like ATP binding protein KS08_RS05720 PF05866 Endodeoxyribonuclease RusA KS08_RS05725 PF17356 Phage-like element PBSX protein XtrA KS08_RS05760 PF02368 Bacterial Ig-like domain (group 2) KS08_RS05805 PF10668 Phage terminase small subunit KS08_RS05880 PF01464 Transglycosylase SLT domain KS08_RS05930 PF09693 Phage uncharacterised protein (Phage_XkdX) KS08_RS05935 PF10779 Haemolysin XhlA KS08_RS05940 PF04688 SPP1 phage holin KS08_RS05945 PF01510 N-acetylmuramoyl-L-alanine amidase KS08_RS05945 PF01471 Putative peptidoglycan binding domain KS08_RS05970 PF04740 LXG domain of WXG superfamily KS08_RS05970 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KS08_RS06005 PF09346 SMI1 / KNR4 family (SUKH-1) KS08_RS06030 PF07693 KAP family P-loop domain KS08_RS06035 PF07693 KAP family P-loop domain KS08_RS06040 PF08863 YolD-like protein KS08_RS06045 PF00817 impB/mucB/samB family KS08_RS06045 PF11799 impB/mucB/samB family C-terminal domain KS08_RS06045 PF11798 IMS family HHH motif KS08_RS06060 PF14037 YoqO-like protein KS08_RS06080 PF18593 CdiI immunity protein KS08_RS06095 PF03992 Antibiotic biosynthesis monooxygenase KS08_RS06100 PF07690 Major Facilitator Superfamily KS08_RS06105 PF01047 MarR family KS08_RS06110 PF07745 Glycosyl hydrolase family 53 KS08_RS06115 PF02378 Phosphotransferase system, EIIC KS08_RS06115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS08_RS06120 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KS08_RS06125 PF00232 Glycosyl hydrolase family 1 KS08_RS06130 PF08220 DeoR-like helix-turn-helix domain KS08_RS06130 PF00455 DeoR C terminal sensor domain KS08_RS06150 PF02308 MgtC family KS08_RS06155 PF10990 Protein of unknown function (DUF2809) KS08_RS06160 PF14172 Domain of unknown function (DUF4309) KS08_RS06165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KS08_RS06165 PF01568 Molydopterin dinucleotide binding domain KS08_RS06165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KS08_RS06165 PF00384 Molybdopterin oxidoreductase KS08_RS06165 PF12838 4Fe-4S dicluster domain KS08_RS06170 PF07849 Protein of unknown function (DUF1641) KS08_RS06175 PF00067 Cytochrome P450 KS08_RS06180 PF04101 Glycosyltransferase family 28 C-terminal domain KS08_RS06190 PF02602 Uroporphyrinogen-III synthase HemD KS08_RS06195 PF03649 Uncharacterised protein family (UPF0014) KS08_RS06200 PF00005 ABC transporter KS08_RS06205 PF13536 Putative multidrug resistance efflux transporter KS08_RS06215 PF07849 Protein of unknown function (DUF1641) KS08_RS06220 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS06225 PF02614 Glucuronate isomerase KS08_RS06230 PF00356 Bacterial regulatory proteins, lacI family KS08_RS06235 PF08666 SAF domain KS08_RS06235 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KS08_RS06240 PF00072 Response regulator receiver domain KS08_RS06240 PF00486 Transcriptional regulatory protein, C terminal KS08_RS06245 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS06245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS06245 PF00672 HAMP domain KS08_RS06255 PF01925 Sulfite exporter TauE/SafE KS08_RS06260 PF05163 DinB family KS08_RS06265 PF18801 response regulator aspartate phosphatase H, N terminal KS08_RS06275 PF01471 Putative peptidoglycan binding domain KS08_RS06275 PF01510 N-acetylmuramoyl-L-alanine amidase KS08_RS06275 PF01476 LysM domain KS08_RS06280 PF08000 Bacterial PH domain KS08_RS06285 PF05908 Poly-gamma-glutamate hydrolase KS08_RS06290 PF06114 IrrE N-terminal-like domain KS08_RS06295 PF01381 Helix-turn-helix KS08_RS06310 PF01695 IstB-like ATP binding protein KS08_RS06320 PF17356 Phage-like element PBSX protein XtrA KS08_RS06325 PF08281 Sigma-70, region 4 KS08_RS06330 PF03592 Terminase small subunit KS08_RS06330 PF10668 Phage terminase small subunit KS08_RS06335 PF04466 Phage terminase large subunit KS08_RS06335 PF17288 Terminase RNAseH like domain KS08_RS06340 PF04860 Phage portal protein KS08_RS06345 PF14550 Putative phage serine protease XkdF KS08_RS06350 PF05065 Phage capsid family KS08_RS06355 PF11436 Protein of unknown function (DUF3199) KS08_RS06360 PF12206 Domain of unknown function (DUF3599) KS08_RS06365 PF04883 Bacteriophage HK97-gp10, putative tail-component KS08_RS06380 PF17482 Phage tail sheath C-terminal domain KS08_RS06380 PF17481 Phage tail sheath protein beta-sandwich domain KS08_RS06380 PF04984 Phage tail sheath protein subtilisin-like domain KS08_RS06385 PF09393 Phage tail tube protein KS08_RS06390 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC KS08_RS06395 PF01464 Transglycosylase SLT domain KS08_RS06395 PF01464 Transglycosylase SLT domain KS08_RS06395 PF01464 Transglycosylase SLT domain KS08_RS06400 PF01476 LysM domain KS08_RS06410 PF10844 Protein of unknown function (DUF2577) KS08_RS06415 PF10934 Protein of unknown function (DUF2634) KS08_RS06420 PF04865 Baseplate J-like protein KS08_RS06425 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) KS08_RS06440 PF09636 XkdW protein KS08_RS06445 PF09693 Phage uncharacterised protein (Phage_XkdX) KS08_RS06455 PF10779 Haemolysin XhlA KS08_RS06460 PF04688 SPP1 phage holin KS08_RS06465 PF01510 N-acetylmuramoyl-L-alanine amidase KS08_RS06465 PF01471 Putative peptidoglycan binding domain KS08_RS06465 PF01476 LysM domain KS08_RS06470 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system KS08_RS06475 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KS08_RS06480 PF01384 Phosphate transporter family KS08_RS06485 PF01865 Protein of unknown function DUF47 KS08_RS06490 PF13520 Amino acid permease KS08_RS06495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS06500 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase KS08_RS06505 PF00535 Glycosyl transferase family 2 KS08_RS06510 PF13180 PDZ domain KS08_RS06515 PF07690 Major Facilitator Superfamily KS08_RS06520 PF04951 D-aminopeptidase KS08_RS06525 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS06530 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS06530 PF12911 N-terminal TM domain of oligopeptide transport permease C KS08_RS06535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS08_RS06535 PF00005 ABC transporter KS08_RS06540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KS08_RS06545 PF17676 LD-carboxypeptidase C-terminal domain KS08_RS06545 PF02016 LD-carboxypeptidase N-terminal domain KS08_RS06550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KS08_RS06550 PF13378 Enolase C-terminal domain-like KS08_RS06555 PF00877 NlpC/P60 family KS08_RS06560 PF00005 ABC transporter KS08_RS06560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS08_RS06565 PF10282 Lactonase, 7-bladed beta-propeller KS08_RS06575 PF03061 Thioesterase superfamily KS08_RS06580 PF13302 Acetyltransferase (GNAT) domain KS08_RS06585 PF00893 Small Multidrug Resistance protein KS08_RS06590 PF00893 Small Multidrug Resistance protein KS08_RS06600 PF01472 PUA domain KS08_RS06600 PF00696 Amino acid kinase family KS08_RS06605 PF00171 Aldehyde dehydrogenase family KS08_RS06610 PF02566 OsmC-like protein KS08_RS06615 PF01047 MarR family KS08_RS06620 PF02566 OsmC-like protein KS08_RS06635 PF00535 Glycosyl transferase family 2 KS08_RS06635 PF13181 Tetratricopeptide repeat KS08_RS06650 PF00027 Cyclic nucleotide-binding domain KS08_RS06655 PF08267 Cobalamin-independent synthase, N-terminal domain KS08_RS06655 PF01717 Cobalamin-independent synthase, Catalytic domain KS08_RS06660 PF00082 Subtilase family KS08_RS06665 PF01740 STAS domain KS08_RS06670 PF02361 Cobalt transport protein KS08_RS06675 PF00005 ABC transporter KS08_RS06680 PF09819 ABC-type cobalt transport system, permease component KS08_RS06685 PF01476 LysM domain KS08_RS06685 PF00704 Glycosyl hydrolases family 18 KS08_RS06690 PF03448 MgtE intracellular N domain KS08_RS06690 PF01769 Divalent cation transporter KS08_RS06690 PF00571 CBS domain KS08_RS06695 PF13411 MerR HTH family regulatory protein KS08_RS06705 PF01047 MarR family KS08_RS06715 PF01068 ATP dependent DNA ligase domain KS08_RS06720 PF02735 Ku70/Ku80 beta-barrel domain KS08_RS06725 PF00563 EAL domain KS08_RS06725 PF00990 Diguanylate cyclase, GGDEF domain KS08_RS06725 PF03707 Bacterial signalling protein N terminal repeat KS08_RS06730 PF09335 SNARE associated Golgi protein KS08_RS06735 PF03741 Integral membrane protein TerC family KS08_RS06740 PF04542 Sigma-70 region 2 KS08_RS06745 PF12791 Anti-sigma factor N-terminus KS08_RS06750 PF00269 Small, acid-soluble spore proteins, alpha/beta type KS08_RS06755 PF08876 Domain of unknown function (DUF1836) KS08_RS06760 PF01435 Peptidase family M48 KS08_RS06765 PF02386 Cation transport protein KS08_RS06770 PF04239 Protein of unknown function (DUF421) KS08_RS06775 PF01757 Acyltransferase family KS08_RS06780 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS06780 PF00989 PAS fold KS08_RS06780 PF13426 PAS domain KS08_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS06780 PF13188 PAS domain KS08_RS06785 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KS08_RS06785 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KS08_RS06790 PF01008 Initiation factor 2 subunit family KS08_RS06795 PF01636 Phosphotransferase enzyme family KS08_RS06800 PF00795 Carbon-nitrogen hydrolase KS08_RS06805 PF00155 Aminotransferase class I and II KS08_RS06810 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KS08_RS06810 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KS08_RS06820 PF00596 Class II Aldolase and Adducin N-terminal domain KS08_RS06825 PF03079 ARD/ARD' family KS08_RS06830 PF09388 Spo0E like sporulation regulatory protein KS08_RS06835 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS06835 PF02743 Cache domain KS08_RS06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS06840 PF01047 MarR family KS08_RS06845 PF00691 OmpA family KS08_RS06845 PF13677 Membrane MotB of proton-channel complex MotA/MotB KS08_RS06850 PF01618 MotA/TolQ/ExbB proton channel family KS08_RS06855 PF10431 C-terminal, D2-small domain, of ClpB protein KS08_RS06855 PF07724 AAA domain (Cdc48 subfamily) KS08_RS06855 PF00004 ATPase family associated with various cellular activities (AAA) KS08_RS06855 PF17871 AAA lid domain KS08_RS06870 PF06508 Queuosine biosynthesis protein QueC KS08_RS06875 PF01242 6-pyruvoyl tetrahydropterin synthase KS08_RS06880 PF04055 Radical SAM superfamily KS08_RS06885 PF14489 QueF-like protein KS08_RS06890 PF11514 Protein of unknown function (DUF3219) KS08_RS06895 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KS08_RS06905 PF07486 Cell Wall Hydrolase KS08_RS06910 PF01943 Polysaccharide biosynthesis protein KS08_RS06915 PF00578 AhpC/TSA family KS08_RS06925 PF00557 Metallopeptidase family M24 KS08_RS06925 PF01321 Creatinase/Prolidase N-terminal domain KS08_RS06930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KS08_RS06930 PF00356 Bacterial regulatory proteins, lacI family KS08_RS06935 PF03123 CAT RNA binding domain KS08_RS06935 PF00874 PRD domain KS08_RS06940 PF00367 phosphotransferase system, EIIB KS08_RS06940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KS08_RS06940 PF02378 Phosphotransferase system, EIIC KS08_RS06945 PF00381 PTS HPr component phosphorylation site KS08_RS06950 PF05524 PEP-utilising enzyme, N-terminal KS08_RS06950 PF00391 PEP-utilising enzyme, mobile domain KS08_RS06950 PF02896 PEP-utilising enzyme, TIM barrel domain KS08_RS06955 PF11132 Transcriptional regulator protein (SplA) KS08_RS06965 PF02743 Cache domain KS08_RS06965 PF00672 HAMP domain KS08_RS06965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS08_RS06970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KS08_RS06970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KS08_RS06980 PF00188 Cysteine-rich secretory protein family KS08_RS06985 PF00905 Penicillin binding protein transpeptidase domain KS08_RS06985 PF03717 Penicillin-binding Protein dimerisation domain KS08_RS06990 PF00989 PAS fold KS08_RS06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS06990 PF08447 PAS fold KS08_RS06990 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS06995 PF00155 Aminotransferase class I and II KS08_RS07000 PF00072 Response regulator receiver domain KS08_RS07000 PF01584 CheW-like domain KS08_RS07005 PF14177 YkyB-like protein KS08_RS07010 PF07690 Major Facilitator Superfamily KS08_RS07015 PF03734 L,D-transpeptidase catalytic domain KS08_RS07015 PF01476 LysM domain KS08_RS07020 PF00149 Calcineurin-like phosphoesterase KS08_RS07020 PF10518 TAT (twin-arginine translocation) pathway signal sequence KS08_RS07035 PF00563 EAL domain KS08_RS07035 PF10388 EAL-domain associated signalling protein domain KS08_RS07040 PF08796 Protein of unknown function (DUF1797) KS08_RS07045 PF04308 Ribonuclease H-like KS08_RS07050 PF14156 Antirepressor AbbA KS08_RS07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS07060 PF03466 LysR substrate binding domain KS08_RS07065 PF00258 Flavodoxin KS08_RS07075 PF00258 Flavodoxin KS08_RS07080 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KS08_RS07080 PF00132 Bacterial transferase hexapeptide (six repeats) KS08_RS07080 PF14602 Hexapeptide repeat of succinyl-transferase KS08_RS07085 PF07687 Peptidase dimerisation domain KS08_RS07085 PF01546 Peptidase family M20/M25/M40 KS08_RS07090 PF03698 Uncharacterised protein family (UPF0180) KS08_RS07095 PF00924 Mechanosensitive ion channel KS08_RS07105 PF00578 AhpC/TSA family KS08_RS07120 PF12804 MobA-like NTP transferase domain KS08_RS07125 PF00899 ThiF family KS08_RS07130 PF03453 MoeA N-terminal region (domain I and II) KS08_RS07130 PF00994 Probable molybdopterin binding domain KS08_RS07130 PF03454 MoeA C-terminal region (domain IV) KS08_RS07135 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KS08_RS07140 PF02391 MoaE protein KS08_RS07145 PF02597 ThiS family KS08_RS07150 PF04893 Yip1 domain KS08_RS07155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KS08_RS07160 PF00005 ABC transporter KS08_RS07165 PF12704 MacB-like periplasmic core domain KS08_RS07165 PF02687 FtsX-like permease family KS08_RS07170 PF00455 DeoR C terminal sensor domain KS08_RS07170 PF08220 DeoR-like helix-turn-helix domain KS08_RS07175 PF00294 pfkB family carbohydrate kinase KS08_RS07180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KS08_RS07180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS08_RS07185 PF10502 Signal peptidase, peptidase S26 KS08_RS07195 PF12848 ABC transporter KS08_RS07195 PF00005 ABC transporter KS08_RS07200 PF08546 Ketopantoate reductase PanE/ApbA C terminal KS08_RS07200 PF02558 Ketopantoate reductase PanE/ApbA KS08_RS07205 PF02073 Thermophilic metalloprotease (M29) KS08_RS07215 PF18277 AbrB C-terminal domain KS08_RS07215 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KS08_RS07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS07220 PF00989 PAS fold KS08_RS07220 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS07225 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KS08_RS07230 PF02254 TrkA-N domain KS08_RS07230 PF02080 TrkA-C domain KS08_RS07235 PF01979 Amidohydrolase family KS08_RS07235 PF13382 Adenine deaminase C-terminal domain KS08_RS07240 PF00753 Metallo-beta-lactamase superfamily KS08_RS07240 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KS08_RS07240 PF17770 Ribonuclease J C-terminal domain KS08_RS07245 PF07288 Protein of unknown function (DUF1447) KS08_RS07255 PF01327 Polypeptide deformylase KS08_RS07265 PF10368 Putative cell-wall binding lipoprotein KS08_RS07270 PF00676 Dehydrogenase E1 component KS08_RS07275 PF02780 Transketolase, C-terminal domain KS08_RS07275 PF02779 Transketolase, pyrimidine binding domain KS08_RS07280 PF02817 e3 binding domain KS08_RS07280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KS08_RS07280 PF00364 Biotin-requiring enzyme KS08_RS07285 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS07285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KS08_RS07295 PF03422 Carbohydrate binding module (family 6) KS08_RS07295 PF00457 Glycosyl hydrolases family 11 KS08_RS07295 PF01522 Polysaccharide deacetylase KS08_RS07300 PF01276 Orn/Lys/Arg decarboxylase, major domain KS08_RS07300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KS08_RS07305 PF05256 Uncharacterised protein family (UPF0223) KS08_RS07310 PF06335 Protein of unknown function (DUF1054) KS08_RS07320 PF00459 Inositol monophosphatase family KS08_RS07325 PF00583 Acetyltransferase (GNAT) family KS08_RS07330 PF02868 Thermolysin metallopeptidase, alpha-helical domain KS08_RS07330 PF01447 Thermolysin metallopeptidase, catalytic domain KS08_RS07330 PF07504 Fungalysin/Thermolysin Propeptide Motif KS08_RS07330 PF03413 Peptidase propeptide and YPEB domain KS08_RS07340 PF13490 Putative zinc-finger KS08_RS07350 PF17259 Family of unknown function (DUF5325) KS08_RS07355 PF00679 Elongation factor G C-terminus KS08_RS07355 PF14492 Elongation Factor G, domain II KS08_RS07355 PF03144 Elongation factor Tu domain 2 KS08_RS07355 PF00009 Elongation factor Tu GTP binding domain KS08_RS07360 PF14036 YlaH-like protein KS08_RS07365 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KS08_RS07370 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KS08_RS07375 PF13638 PIN domain KS08_RS07375 PF02562 PhoH-like protein KS08_RS07385 PF04960 Glutaminase KS08_RS07390 PF07408 Protein of unknown function (DUF1507) KS08_RS07395 PF01098 Cell cycle protein KS08_RS07400 PF00364 Biotin-requiring enzyme KS08_RS07400 PF02785 Biotin carboxylase C-terminal domain KS08_RS07400 PF02436 Conserved carboxylase domain KS08_RS07400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KS08_RS07400 PF00682 HMGL-like KS08_RS07400 PF00289 Biotin carboxylase, N-terminal domain KS08_RS07405 PF02628 Cytochrome oxidase assembly protein KS08_RS07410 PF01040 UbiA prenyltransferase family KS08_RS07415 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KS08_RS07415 PF00034 Cytochrome c KS08_RS07415 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KS08_RS07420 PF00115 Cytochrome C and Quinol oxidase polypeptide I KS08_RS07425 PF00510 Cytochrome c oxidase subunit III KS08_RS07430 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KS08_RS07435 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KS08_RS07440 PF08868 YugN-like family KS08_RS07445 PF00571 CBS domain KS08_RS07450 PF14504 CAP-associated N-terminal KS08_RS07450 PF00188 Cysteine-rich secretory protein family KS08_RS07455 PF14071 Putative coat protein KS08_RS07460 PF14003 YlbE-like protein KS08_RS07465 PF06133 Control of competence regulator ComK, YlbF/YmcA KS08_RS07470 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KS08_RS07480 PF01467 Cytidylyltransferase-like KS08_RS07485 PF07670 Nucleoside recognition KS08_RS07490 PF01734 Patatin-like phospholipase KS08_RS07495 PF13180 PDZ domain KS08_RS07495 PF05362 Lon protease (S16) C-terminal proteolytic domain KS08_RS07500 PF05636 HIGH Nucleotidyl Transferase KS08_RS07505 PF02620 Large ribosomal RNA subunit accumulation protein YceD KS08_RS07515 PF00583 Acetyltransferase (GNAT) family KS08_RS07520 PF08546 Ketopantoate reductase PanE/ApbA C terminal KS08_RS07520 PF02558 Ketopantoate reductase PanE/ApbA KS08_RS07525 PF10079 Bacillithiol biosynthesis BshC KS08_RS07530 PF02381 MraZ protein, putative antitoxin-like KS08_RS07535 PF01795 MraW methylase family KS08_RS07545 PF03793 PASTA domain KS08_RS07545 PF03717 Penicillin-binding Protein dimerisation domain KS08_RS07545 PF00905 Penicillin binding protein transpeptidase domain KS08_RS07550 PF03717 Penicillin-binding Protein dimerisation domain KS08_RS07550 PF00905 Penicillin binding protein transpeptidase domain KS08_RS07550 PF03793 PASTA domain KS08_RS07555 PF08245 Mur ligase middle domain KS08_RS07555 PF02875 Mur ligase family, glutamate ligase domain KS08_RS07555 PF01225 Mur ligase family, catalytic domain KS08_RS07560 PF00953 Glycosyl transferase family 4 KS08_RS07560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KS08_RS07565 PF08245 Mur ligase middle domain KS08_RS07565 PF02875 Mur ligase family, glutamate ligase domain KS08_RS07570 PF01098 Cell cycle protein KS08_RS07575 PF04101 Glycosyltransferase family 28 C-terminal domain KS08_RS07575 PF03033 Glycosyltransferase family 28 N-terminal domain KS08_RS07580 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KS08_RS07580 PF01565 FAD binding domain KS08_RS07585 PF08478 POTRA domain, FtsQ-type KS08_RS07590 PF02491 SHS2 domain inserted in FTSA KS08_RS07595 PF00091 Tubulin/FtsZ family, GTPase domain KS08_RS07595 PF12327 FtsZ family, C-terminal domain KS08_RS07600 PF00082 Subtilase family KS08_RS07600 PF05922 Peptidase inhibitor I9 KS08_RS07605 PF03419 Sporulation factor SpoIIGA KS08_RS07610 PF04542 Sigma-70 region 2 KS08_RS07610 PF04545 Sigma-70, region 4 KS08_RS07615 PF04545 Sigma-70, region 4 KS08_RS07615 PF04542 Sigma-70 region 2 KS08_RS07615 PF04539 Sigma-70 region 3 KS08_RS07620 PF00005 ABC transporter KS08_RS07625 PF01546 Peptidase family M20/M25/M40 KS08_RS07625 PF07687 Peptidase dimerisation domain KS08_RS07630 PF05239 PRC-barrel domain KS08_RS07635 PF02578 Multi-copper polyphenol oxidoreductase laccase KS08_RS07640 PF01168 Alanine racemase, N-terminal domain KS08_RS07645 PF04472 Cell division protein SepF KS08_RS07650 PF02325 YGGT family KS08_RS07655 PF01479 S4 domain KS08_RS07655 PF17774 Putative RNA-binding domain in YlmH KS08_RS07660 PF05103 DivIVA protein KS08_RS07670 PF00133 tRNA synthetases class I (I, L, M and V) KS08_RS07670 PF08264 Anticodon-binding domain of tRNA KS08_RS07675 PF01258 Prokaryotic dksA/traR C4-type zinc finger KS08_RS07680 PF01252 Signal peptidase (SPase) II KS08_RS07685 PF01479 S4 domain KS08_RS07685 PF00849 RNA pseudouridylate synthase KS08_RS07690 PF00156 Phosphoribosyl transferase domain KS08_RS07695 PF00860 Permease family KS08_RS07700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KS08_RS07700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KS08_RS07705 PF01979 Amidohydrolase family KS08_RS07710 PF00117 Glutamine amidotransferase class-I KS08_RS07710 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KS08_RS07715 PF02142 MGS-like domain KS08_RS07715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KS08_RS07715 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KS08_RS07720 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KS08_RS07720 PF00175 Oxidoreductase NAD-binding domain KS08_RS07725 PF01180 Dihydroorotate dehydrogenase KS08_RS07730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KS08_RS07735 PF00156 Phosphoribosyl transferase domain KS08_RS07745 PF01507 Phosphoadenosine phosphosulfate reductase family KS08_RS07750 PF01384 Phosphate transporter family KS08_RS07755 PF14306 PUA-like domain KS08_RS07755 PF01747 ATP-sulfurylase KS08_RS07765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KS08_RS07770 PF01903 CbiX KS08_RS07780 PF09154 Domain of unknown function (DUF1939) KS08_RS07780 PF00128 Alpha amylase, catalytic domain KS08_RS07785 PF05670 NFACT protein RNA binding domain KS08_RS07790 PF00689 Cation transporting ATPase, C-terminus KS08_RS07790 PF00690 Cation transporter/ATPase, N-terminus KS08_RS07795 PF03755 YicC-like family, N-terminal region KS08_RS07795 PF08340 Domain of unknown function (DUF1732) KS08_RS07800 PF04025 Domain of unknown function (DUF370) KS08_RS07805 PF00625 Guanylate kinase KS08_RS07810 PF01192 RNA polymerase Rpb6 KS08_RS07815 PF02441 Flavoprotein KS08_RS07815 PF04127 DNA / pantothenate metabolism flavoprotein KS08_RS07820 PF17764 3′ DNA-binding domain (3′BD) KS08_RS07820 PF00271 Helicase conserved C-terminal domain KS08_RS07820 PF18074 Primosomal protein N C-terminal domain KS08_RS07820 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KS08_RS07820 PF04851 Type III restriction enzyme, res subunit KS08_RS07825 PF01327 Polypeptide deformylase KS08_RS07830 PF00551 Formyl transferase KS08_RS07830 PF02911 Formyl transferase, C-terminal domain KS08_RS07835 PF01189 16S rRNA methyltransferase RsmB/F KS08_RS07835 PF01029 NusB family KS08_RS07840 PF04055 Radical SAM superfamily KS08_RS07850 PF00069 Protein kinase domain KS08_RS07850 PF03793 PASTA domain KS08_RS07855 PF16745 RsgA N-terminal domain KS08_RS07855 PF03193 RsgA GTPase KS08_RS07860 PF00834 Ribulose-phosphate 3 epimerase family KS08_RS07865 PF04263 Thiamin pyrophosphokinase, catalytic domain KS08_RS07865 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KS08_RS07870 PF08183 Stage V sporulation protein family KS08_RS07875 PF00830 Ribosomal L28 family KS08_RS07880 PF03780 Asp23 family, cell envelope-related function KS08_RS07885 PF13684 Dihydroxyacetone kinase family KS08_RS07885 PF02734 DAK2 domain KS08_RS07890 PF03315 Serine dehydratase beta chain KS08_RS07890 PF01842 ACT domain KS08_RS07895 PF03313 Serine dehydratase alpha chain KS08_RS07900 PF00270 DEAD/DEAH box helicase KS08_RS07900 PF00271 Helicase conserved C-terminal domain KS08_RS07900 PF17191 RecG wedge domain KS08_RS07905 PF03061 Thioesterase superfamily KS08_RS07910 PF02504 Fatty acid synthesis protein KS08_RS07915 PF00698 Acyl transferase domain KS08_RS07925 PF00550 Phosphopantetheine attachment site KS08_RS07930 PF14622 Ribonuclease-III-like KS08_RS07930 PF00035 Double-stranded RNA binding motif KS08_RS07935 PF02463 RecF/RecN/SMC N terminal domain KS08_RS07935 PF06470 SMC proteins Flexible Hinge Domain KS08_RS07940 PF02881 SRP54-type protein, helical bundle domain KS08_RS07940 PF00448 SRP54-type protein, GTPase domain KS08_RS07945 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KS08_RS07950 PF02978 Signal peptide binding domain KS08_RS07950 PF00448 SRP54-type protein, GTPase domain KS08_RS07950 PF02881 SRP54-type protein, helical bundle domain KS08_RS07955 PF00886 Ribosomal protein S16 KS08_RS07965 PF11068 YlqD protein KS08_RS07970 PF01782 RimM N-terminal domain KS08_RS07970 PF05239 PRC-barrel domain KS08_RS07975 PF01746 tRNA (Guanine-1)-methyltransferase KS08_RS07980 PF01245 Ribosomal protein L19 KS08_RS07985 PF01926 50S ribosome-binding GTPase KS08_RS07990 PF01351 Ribonuclease HII KS08_RS08000 PF01312 FlhB HrpN YscU SpaS Family KS08_RS08005 PF00549 CoA-ligase KS08_RS08005 PF08442 ATP-grasp domain KS08_RS08010 PF00549 CoA-ligase KS08_RS08010 PF02629 CoA binding domain KS08_RS08015 PF02481 DNA recombination-mediator protein A KS08_RS08020 PF01131 DNA topoisomerase KS08_RS08020 PF01751 Toprim domain KS08_RS08020 PF01396 Topoisomerase DNA binding C4 zinc finger KS08_RS08025 PF01134 Glucose inhibited division protein A KS08_RS08030 PF02899 Phage integrase, N-terminal SAM-like domain KS08_RS08030 PF00589 Phage integrase family KS08_RS08035 PF00227 Proteasome subunit KS08_RS08040 PF10431 C-terminal, D2-small domain, of ClpB protein KS08_RS08040 PF07724 AAA domain (Cdc48 subfamily) KS08_RS08040 PF00004 ATPase family associated with various cellular activities (AAA) KS08_RS08045 PF08222 CodY helix-turn-helix domain KS08_RS08045 PF06018 CodY GAF-like domain KS08_RS08055 PF00460 Flagella basal body rod protein KS08_RS08055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KS08_RS08060 PF02049 Flagellar hook-basal body complex protein FliE KS08_RS08065 PF01514 Secretory protein of YscJ/FliF family KS08_RS08065 PF08345 Flagellar M-ring protein C-terminal KS08_RS08070 PF14841 FliG middle domain KS08_RS08070 PF14842 FliG N-terminal domain KS08_RS08070 PF01706 FliG C-terminal domain KS08_RS08075 PF02108 Flagellar assembly protein FliH KS08_RS08080 PF18269 T3SS EscN ATPase C-terminal domain KS08_RS08080 PF02874 ATP synthase alpha/beta family, beta-barrel domain KS08_RS08080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KS08_RS08085 PF02050 Flagellar FliJ protein KS08_RS08090 PF03448 MgtE intracellular N domain KS08_RS08095 PF02120 Flagellar hook-length control protein FliK KS08_RS08100 PF03963 Flagellar hook capping protein - N-terminal region KS08_RS08105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KS08_RS08105 PF00460 Flagella basal body rod protein KS08_RS08110 PF06289 Flagellar and Swarming motility proteins KS08_RS08115 PF03748 Flagellar basal body-associated protein FliL KS08_RS08120 PF02154 Flagellar motor switch protein FliM KS08_RS08120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KS08_RS08125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KS08_RS08125 PF04509 CheC-like family KS08_RS08130 PF00072 Response regulator receiver domain KS08_RS08135 PF04347 Flagellar biosynthesis protein, FliO KS08_RS08140 PF00813 FliP family KS08_RS08145 PF01313 Bacterial export proteins, family 3 KS08_RS08150 PF01311 Bacterial export proteins, family 1 KS08_RS08155 PF01312 FlhB HrpN YscU SpaS Family KS08_RS08160 PF00771 FHIPEP family KS08_RS08165 PF00448 SRP54-type protein, GTPase domain KS08_RS08170 PF10609 NUBPL iron-transfer P-loop NTPase KS08_RS08175 PF01339 CheB methylesterase KS08_RS08175 PF00072 Response regulator receiver domain KS08_RS08180 PF01584 CheW-like domain KS08_RS08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS08180 PF01627 Hpt domain KS08_RS08180 PF07194 P2 response regulator binding domain KS08_RS08180 PF02895 Signal transducing histidine kinase, homodimeric domain KS08_RS08185 PF01584 CheW-like domain KS08_RS08190 PF04509 CheC-like family KS08_RS08195 PF03975 CheD chemotactic sensory transduction KS08_RS08200 PF04545 Sigma-70, region 4 KS08_RS08200 PF04539 Sigma-70 region 3 KS08_RS08200 PF04542 Sigma-70 region 2 KS08_RS08210 PF00318 Ribosomal protein S2 KS08_RS08215 PF00889 Elongation factor TS KS08_RS08220 PF00696 Amino acid kinase family KS08_RS08225 PF01765 Ribosome recycling factor KS08_RS08230 PF01255 Putative undecaprenyl diphosphate synthase KS08_RS08240 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KS08_RS08240 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KS08_RS08240 PF13288 DXP reductoisomerase C-terminal domain KS08_RS08245 PF17820 PDZ domain KS08_RS08245 PF02163 Peptidase family M50 KS08_RS08250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KS08_RS08250 PF04073 Aminoacyl-tRNA editing domain KS08_RS08250 PF03129 Anticodon binding domain KS08_RS08255 PF00929 Exonuclease KS08_RS08255 PF07733 Bacterial DNA polymerase III alpha NTPase domain KS08_RS08255 PF11490 DNA polymerase III polC-type N-terminus II KS08_RS08255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KS08_RS08255 PF14480 DNA polymerase III polC-type N-terminus I KS08_RS08255 PF02811 PHP domain KS08_RS08255 PF14579 Helix-hairpin-helix motif KS08_RS08260 PF17384 RimP C-terminal SH3 domain KS08_RS08260 PF02576 RimP N-terminal domain KS08_RS08265 PF00575 S1 RNA binding domain KS08_RS08265 PF08529 NusA N-terminal domain KS08_RS08265 PF13184 NusA-like KH domain KS08_RS08270 PF04296 Protein of unknown function (DUF448) KS08_RS08275 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KS08_RS08280 PF04760 Translation initiation factor IF-2, N-terminal region KS08_RS08280 PF00009 Elongation factor Tu GTP binding domain KS08_RS08280 PF11987 Translation-initiation factor 2 KS08_RS08285 PF04456 Protein of unknown function (DUF503) KS08_RS08290 PF02033 Ribosome-binding factor A KS08_RS08295 PF16198 tRNA pseudouridylate synthase B C-terminal domain KS08_RS08295 PF01509 TruB family pseudouridylate synthase (N terminal domain) KS08_RS08300 PF01687 Riboflavin kinase KS08_RS08300 PF06574 FAD synthetase KS08_RS08305 PF00312 Ribosomal protein S15 KS08_RS08310 PF03725 3' exoribonuclease family, domain 2 KS08_RS08310 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KS08_RS08310 PF00575 S1 RNA binding domain KS08_RS08310 PF01138 3' exoribonuclease family, domain 1 KS08_RS08310 PF00013 KH domain KS08_RS08315 PF01522 Polysaccharide deacetylase KS08_RS08320 PF05193 Peptidase M16 inactive domain KS08_RS08320 PF00675 Insulinase (Peptidase family M16) KS08_RS08325 PF05239 PRC-barrel domain KS08_RS08330 PF16924 Dipicolinate synthase subunit A N-terminal domain KS08_RS08330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KS08_RS08335 PF02441 Flavoprotein KS08_RS08340 PF01118 Semialdehyde dehydrogenase, NAD binding domain KS08_RS08340 PF02774 Semialdehyde dehydrogenase, dimerisation domain KS08_RS08345 PF00696 Amino acid kinase family KS08_RS08345 PF13840 ACT domain KS08_RS08350 PF00701 Dihydrodipicolinate synthetase family KS08_RS08355 PF00753 Metallo-beta-lactamase superfamily KS08_RS08355 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KS08_RS08355 PF17770 Ribonuclease J C-terminal domain KS08_RS08360 PF00574 Clp protease KS08_RS08365 PF14035 YlzJ-like protein KS08_RS08370 PF01580 FtsK/SpoIIIE family KS08_RS08370 PF17854 FtsK alpha domain KS08_RS08370 PF09397 Ftsk gamma domain KS08_RS08375 PF00392 Bacterial regulatory proteins, gntR family KS08_RS08375 PF07702 UTRA domain KS08_RS08380 PF07690 Major Facilitator Superfamily KS08_RS08385 PF01047 MarR family KS08_RS08390 PF03176 MMPL family KS08_RS08395 PF05193 Peptidase M16 inactive domain KS08_RS08400 PF05193 Peptidase M16 inactive domain KS08_RS08400 PF00675 Insulinase (Peptidase family M16) KS08_RS08410 PF11588 Protein of unknown function (DUF3243) KS08_RS08415 PF11868 Protein of unknown function (DUF3388) KS08_RS08420 PF13464 Domain of unknown function (DUF4115) KS08_RS08425 PF01066 CDP-alcohol phosphatidyltransferase KS08_RS08430 PF18146 Damage-inducible protein CinA KH domain KS08_RS08430 PF02464 Competence-damaged protein KS08_RS08430 PF00994 Probable molybdopterin binding domain KS08_RS08435 PF00154 recA bacterial DNA recombination protein KS08_RS08440 PF00144 Beta-lactamase KS08_RS08445 PF12072 Domain of unknown function (DUF3552) KS08_RS08445 PF00013 KH domain KS08_RS08445 PF01966 HD domain KS08_RS08450 PF13277 YmdB-like protein KS08_RS08455 PF04232 Stage V sporulation protein S (SpoVS) KS08_RS08460 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS08460 PF00107 Zinc-binding dehydrogenase KS08_RS08465 PF00155 Aminotransferase class I and II KS08_RS08470 PF00919 Uncharacterized protein family UPF0004 KS08_RS08470 PF01938 TRAM domain KS08_RS08470 PF04055 Radical SAM superfamily KS08_RS08475 PF06133 Control of competence regulator ComK, YlbF/YmcA KS08_RS08480 PF10628 Outer spore coat protein E (CotE) KS08_RS08485 PF01624 MutS domain I KS08_RS08485 PF05192 MutS domain III KS08_RS08485 PF00488 MutS domain V KS08_RS08485 PF05190 MutS family domain IV KS08_RS08485 PF05188 MutS domain II KS08_RS08490 PF08676 MutL C terminal dimerisation domain KS08_RS08490 PF01119 DNA mismatch repair protein, C-terminal domain KS08_RS08495 PF00753 Metallo-beta-lactamase superfamily KS08_RS08500 PF00698 Acyl transferase domain KS08_RS08505 PF00698 Acyl transferase domain KS08_RS08510 PF00698 Acyl transferase domain KS08_RS08515 PF00550 Phosphopantetheine attachment site KS08_RS08520 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal KS08_RS08520 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal KS08_RS08525 PF00378 Enoyl-CoA hydratase/isomerase KS08_RS08530 PF00378 Enoyl-CoA hydratase/isomerase KS08_RS08535 PF02801 Beta-ketoacyl synthase, C-terminal domain KS08_RS08535 PF08659 KR domain KS08_RS08535 PF14765 Polyketide synthase dehydratase KS08_RS08535 PF00550 Phosphopantetheine attachment site KS08_RS08535 PF00109 Beta-ketoacyl synthase, N-terminal domain KS08_RS08535 PF16197 Ketoacyl-synthetase C-terminal extension KS08_RS08535 PF00501 AMP-binding enzyme KS08_RS08535 PF13193 AMP-binding enzyme C-terminal domain KS08_RS08535 PF00668 Condensation domain KS08_RS08540 PF08659 KR domain KS08_RS08540 PF14765 Polyketide synthase dehydratase KS08_RS08540 PF00109 Beta-ketoacyl synthase, N-terminal domain KS08_RS08540 PF16197 Ketoacyl-synthetase C-terminal extension KS08_RS08540 PF00550 Phosphopantetheine attachment site KS08_RS08540 PF02801 Beta-ketoacyl synthase, C-terminal domain KS08_RS08545 PF16197 Ketoacyl-synthetase C-terminal extension KS08_RS08545 PF08659 KR domain KS08_RS08545 PF08242 Methyltransferase domain KS08_RS08545 PF08659 KR domain KS08_RS08545 PF00109 Beta-ketoacyl synthase, N-terminal domain KS08_RS08545 PF00550 Phosphopantetheine attachment site KS08_RS08545 PF02801 Beta-ketoacyl synthase, C-terminal domain KS08_RS08545 PF08242 Methyltransferase domain KS08_RS08545 PF00109 Beta-ketoacyl synthase, N-terminal domain KS08_RS08545 PF14765 Polyketide synthase dehydratase KS08_RS08545 PF16197 Ketoacyl-synthetase C-terminal extension KS08_RS08545 PF00550 Phosphopantetheine attachment site KS08_RS08545 PF02801 Beta-ketoacyl synthase, C-terminal domain KS08_RS08545 PF14765 Polyketide synthase dehydratase KS08_RS08550 PF00109 Beta-ketoacyl synthase, N-terminal domain KS08_RS08550 PF00501 AMP-binding enzyme KS08_RS08550 PF00668 Condensation domain KS08_RS08550 PF00550 Phosphopantetheine attachment site KS08_RS08550 PF08659 KR domain KS08_RS08550 PF13193 AMP-binding enzyme C-terminal domain KS08_RS08550 PF14765 Polyketide synthase dehydratase KS08_RS08550 PF16197 Ketoacyl-synthetase C-terminal extension KS08_RS08550 PF02801 Beta-ketoacyl synthase, C-terminal domain KS08_RS08555 PF14765 Polyketide synthase dehydratase KS08_RS08555 PF00975 Thioesterase domain KS08_RS08555 PF00550 Phosphopantetheine attachment site KS08_RS08555 PF00109 Beta-ketoacyl synthase, N-terminal domain KS08_RS08555 PF16197 Ketoacyl-synthetase C-terminal extension KS08_RS08555 PF02801 Beta-ketoacyl synthase, C-terminal domain KS08_RS08555 PF08242 Methyltransferase domain KS08_RS08560 PF00067 Cytochrome P450 KS08_RS08565 PF14040 Deoxyribonuclease NucA/NucB KS08_RS08570 PF06912 Protein of unknown function (DUF1275) KS08_RS08580 PF00082 Subtilase family KS08_RS08590 PF05908 Poly-gamma-glutamate hydrolase KS08_RS08595 PF02566 OsmC-like protein KS08_RS08600 PF00893 Small Multidrug Resistance protein KS08_RS08605 PF00893 Small Multidrug Resistance protein KS08_RS08615 PF12788 YmaF family KS08_RS08625 PF17209 Hfq protein KS08_RS08630 PF14157 YmzC-like protein KS08_RS08640 PF07972 NrdI Flavodoxin like KS08_RS08645 PF02867 Ribonucleotide reductase, barrel domain KS08_RS08645 PF00317 Ribonucleotide reductase, all-alpha domain KS08_RS08645 PF08343 Ribonucleotide reductase N-terminal KS08_RS08650 PF00268 Ribonucleotide reductase, small chain KS08_RS08670 PF00004 ATPase family associated with various cellular activities (AAA) KS08_RS08670 PF17866 AAA lid domain KS08_RS08675 PF16360 GTP-binding GTPase Middle Region KS08_RS08675 PF01926 50S ribosome-binding GTPase KS08_RS08675 PF13167 GTP-binding GTPase N-terminal KS08_RS08680 PF06838 Methionine gamma-lyase KS08_RS08685 PF13411 MerR HTH family regulatory protein KS08_RS08690 PF00120 Glutamine synthetase, catalytic domain KS08_RS08690 PF03951 Glutamine synthetase, beta-Grasp domain KS08_RS08715 PF00457 Glycosyl hydrolases family 11 KS08_RS08720 PF00067 Cytochrome P450 KS08_RS08730 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KS08_RS08730 PF04616 Glycosyl hydrolases family 43 KS08_RS08735 PF00480 ROK family KS08_RS08740 PF01261 Xylose isomerase-like TIM barrel KS08_RS08745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KS08_RS08745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KS08_RS08750 PF00457 Glycosyl hydrolases family 11 KS08_RS08755 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KS08_RS08755 PF00391 PEP-utilising enzyme, mobile domain KS08_RS08765 PF00107 Zinc-binding dehydrogenase KS08_RS08765 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS08775 PF18801 response regulator aspartate phosphatase H, N terminal KS08_RS08785 PF05163 DinB family KS08_RS08790 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS08790 PF00107 Zinc-binding dehydrogenase KS08_RS08805 PF13217 Protein of unknown function (DUF4025) KS08_RS08810 PF17094 Uncharacterised protein family (UPF0715) KS08_RS08815 PF14268 YoaP-like KS08_RS08815 PF00583 Acetyltransferase (GNAT) family KS08_RS08835 PF16302 Domain of unknown function (DUF4944) KS08_RS08840 PF13021 Domain of unknown function (DUF3885) KS08_RS08850 PF18416 N-acetylglucosamine binding protein domain 2 KS08_RS08850 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KS08_RS08865 PF12708 Pectate lyase superfamily protein KS08_RS08865 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KS08_RS08870 PF05154 TM2 domain KS08_RS08875 PF00692 dUTPase KS08_RS08880 PF13783 Domain of unknown function (DUF4177) KS08_RS08885 PF05908 Poly-gamma-glutamate hydrolase KS08_RS08895 PF10710 Protein of unknown function (DUF2512) KS08_RS08905 PF01726 LexA DNA binding domain KS08_RS08905 PF00717 Peptidase S24-like KS08_RS08910 PF01476 LysM domain KS08_RS08915 PF00239 Resolvase, N terminal domain KS08_RS08920 PF05979 Bacterial protein of unknown function (DUF896) KS08_RS08925 PF02779 Transketolase, pyrimidine binding domain KS08_RS08925 PF00456 Transketolase, thiamine diphosphate binding domain KS08_RS08925 PF02780 Transketolase, C-terminal domain KS08_RS08930 PF10747 Sporulation inhibitor of replication protein SirA KS08_RS08935 PF03672 Uncharacterised protein family (UPF0154) KS08_RS08940 PF09388 Spo0E like sporulation regulatory protein KS08_RS08945 PF02683 Cytochrome C biogenesis protein transmembrane region KS08_RS08950 PF00072 Response regulator receiver domain KS08_RS08955 PF07301 Protein of unknown function (DUF1453) KS08_RS08960 PF11084 Protein of unknown function (DUF2621) KS08_RS08970 PF08179 Small acid-soluble spore protein P family KS08_RS08980 PF00694 Aconitase C-terminal domain KS08_RS08980 PF00330 Aconitase family (aconitate hydratase) KS08_RS08985 PF00578 AhpC/TSA family KS08_RS08990 PF08177 Small acid-soluble spore protein N family KS08_RS09000 PF03061 Thioesterase superfamily KS08_RS09010 PF01521 Iron-sulphur cluster biosynthesis KS08_RS09015 PF02660 Glycerol-3-phosphate acyltransferase KS08_RS09020 PF13380 CoA binding domain KS08_RS09025 PF00986 DNA gyrase B subunit, carboxyl terminus KS08_RS09025 PF01751 Toprim domain KS08_RS09025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS09025 PF00204 DNA gyrase B KS08_RS09030 PF00521 DNA gyrase/topoisomerase IV, subunit A KS08_RS09030 PF03989 DNA gyrase C-terminal domain, beta-propeller KS08_RS09040 PF01235 Sodium:alanine symporter family KS08_RS09050 PF13761 Domain of unknown function (DUF4166) KS08_RS09055 PF14158 YndJ-like protein KS08_RS09070 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS09070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS09075 PF00072 Response regulator receiver domain KS08_RS09075 PF00486 Transcriptional regulatory protein, C terminal KS08_RS09080 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain KS08_RS09080 PF17189 Glycosyl hydrolase family 30 beta sandwich domain KS08_RS09085 PF03422 Carbohydrate binding module (family 6) KS08_RS09085 PF04616 Glycosyl hydrolases family 43 KS08_RS09090 PF00501 AMP-binding enzyme KS08_RS09090 PF00975 Thioesterase domain KS08_RS09090 PF13193 AMP-binding enzyme C-terminal domain KS08_RS09090 PF00668 Condensation domain KS08_RS09090 PF00550 Phosphopantetheine attachment site KS08_RS09095 PF00501 AMP-binding enzyme KS08_RS09095 PF13193 AMP-binding enzyme C-terminal domain KS08_RS09095 PF00668 Condensation domain KS08_RS09095 PF00550 Phosphopantetheine attachment site KS08_RS09100 PF00202 Aminotransferase class-III KS08_RS09100 PF13193 AMP-binding enzyme C-terminal domain KS08_RS09100 PF00668 Condensation domain KS08_RS09100 PF16197 Ketoacyl-synthetase C-terminal extension KS08_RS09100 PF00109 Beta-ketoacyl synthase, N-terminal domain KS08_RS09100 PF00501 AMP-binding enzyme KS08_RS09100 PF00550 Phosphopantetheine attachment site KS08_RS09100 PF02801 Beta-ketoacyl synthase, C-terminal domain KS08_RS09105 PF00698 Acyl transferase domain KS08_RS09115 PF01144 Coenzyme A transferase KS08_RS09120 PF01144 Coenzyme A transferase KS08_RS09125 PF00067 Cytochrome P450 KS08_RS09130 PF04055 Radical SAM superfamily KS08_RS09130 PF06968 Biotin and Thiamin Synthesis associated domain KS08_RS09140 PF00155 Aminotransferase class I and II KS08_RS09145 PF00202 Aminotransferase class-III KS08_RS09150 PF03744 6-carboxyhexanoate--CoA ligase KS08_RS09155 PF04138 GtrA-like protein KS08_RS09160 PF00483 Nucleotidyl transferase KS08_RS09165 PF09335 SNARE associated Golgi protein KS08_RS09170 PF01039 Carboxyl transferase domain KS08_RS09175 PF00378 Enoyl-CoA hydratase/isomerase KS08_RS09180 PF00682 HMGL-like KS08_RS09185 PF00364 Biotin-requiring enzyme KS08_RS09190 PF00289 Biotin carboxylase, N-terminal domain KS08_RS09190 PF02785 Biotin carboxylase C-terminal domain KS08_RS09190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KS08_RS09195 PF00501 AMP-binding enzyme KS08_RS09195 PF13193 AMP-binding enzyme C-terminal domain KS08_RS09200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KS08_RS09200 PF02770 Acyl-CoA dehydrogenase, middle domain KS08_RS09200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KS08_RS09205 PF02638 Glycosyl hydrolase-like 10 KS08_RS09210 PF07098 Protein of unknown function (DUF1360) KS08_RS09215 PF00668 Condensation domain KS08_RS09215 PF00501 AMP-binding enzyme KS08_RS09215 PF00975 Thioesterase domain KS08_RS09215 PF13193 AMP-binding enzyme C-terminal domain KS08_RS09215 PF00550 Phosphopantetheine attachment site KS08_RS09220 PF00550 Phosphopantetheine attachment site KS08_RS09220 PF00668 Condensation domain KS08_RS09220 PF00501 AMP-binding enzyme KS08_RS09220 PF13193 AMP-binding enzyme C-terminal domain KS08_RS09225 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KS08_RS09230 PF01263 Aldose 1-epimerase KS08_RS09235 PF01554 MatE KS08_RS09240 PF16800 IseA DL-endopeptidase inhibitor KS08_RS09250 PF00589 Phage integrase family KS08_RS09255 PF12728 Helix-turn-helix domain KS08_RS09265 PF07690 Major Facilitator Superfamily KS08_RS09275 PF02824 TGS domain KS08_RS09275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KS08_RS09275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KS08_RS09275 PF03129 Anticodon binding domain KS08_RS09280 PF03466 LysR substrate binding domain KS08_RS09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS09285 PF00107 Zinc-binding dehydrogenase KS08_RS09285 PF08240 Alcohol dehydrogenase GroES-like domain KS08_RS09295 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS09295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KS08_RS09300 PF00310 Glutamine amidotransferases class-II KS08_RS09300 PF04898 Glutamate synthase central domain KS08_RS09300 PF01645 Conserved region in glutamate synthase KS08_RS09300 PF01493 GXGXG motif KS08_RS09305 PF03466 LysR substrate binding domain KS08_RS09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS09310 PF00696 Amino acid kinase family KS08_RS09310 PF01472 PUA domain KS08_RS09315 PF03807 NADP oxidoreductase coenzyme F420-dependent KS08_RS09315 PF14748 Pyrroline-5-carboxylate reductase dimerisation KS08_RS09320 PF02334 Replication terminator protein KS08_RS09325 PF00106 short chain dehydrogenase KS08_RS09330 PF06103 Bacterial protein of unknown function (DUF948) KS08_RS09340 PF07690 Major Facilitator Superfamily KS08_RS09345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KS08_RS09345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KS08_RS09350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KS08_RS09350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KS08_RS09355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KS08_RS09355 PF00384 Molybdopterin oxidoreductase KS08_RS09355 PF01568 Molydopterin dinucleotide binding domain KS08_RS09385 PF01588 Putative tRNA binding domain KS08_RS09390 PF07883 Cupin domain KS08_RS09390 PF12833 Helix-turn-helix domain KS08_RS09395 PF00440 Bacterial regulatory proteins, tetR family KS08_RS09395 PF13305 Tetracyclin repressor-like, C-terminal domain KS08_RS09400 PF00753 Metallo-beta-lactamase superfamily KS08_RS09410 PF01022 Bacterial regulatory protein, arsR family KS08_RS09420 PF04238 Protein of unknown function (DUF420) KS08_RS09425 PF18846 Bacterial archaeo-eukaryotic release factor family 5 KS08_RS09435 PF02016 LD-carboxypeptidase N-terminal domain KS08_RS09435 PF17676 LD-carboxypeptidase C-terminal domain KS08_RS09445 PF01476 LysM domain KS08_RS09445 PF06725 3D domain KS08_RS09450 PF16124 RecQ zinc-binding KS08_RS09450 PF00270 DEAD/DEAH box helicase KS08_RS09450 PF00271 Helicase conserved C-terminal domain KS08_RS09450 PF09382 RQC domain KS08_RS09450 PF00570 HRDC domain KS08_RS09460 PF02525 Flavodoxin-like fold KS08_RS09465 PF01258 Prokaryotic dksA/traR C4-type zinc finger KS08_RS09480 PF00011 Hsp20/alpha crystallin family KS08_RS09495 PF08000 Bacterial PH domain KS08_RS09510 PF00171 Aldehyde dehydrogenase family KS08_RS09515 PF13249 Squalene-hopene cyclase N-terminal domain KS08_RS09515 PF13243 Squalene-hopene cyclase C-terminal domain KS08_RS09520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KS08_RS09520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KS08_RS09525 PF00209 Sodium:neurotransmitter symporter family KS08_RS09530 PF01758 Sodium Bile acid symporter family KS08_RS09535 PF00753 Metallo-beta-lactamase superfamily KS08_RS09540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KS08_RS09540 PF00364 Biotin-requiring enzyme KS08_RS09540 PF02817 e3 binding domain KS08_RS09545 PF00676 Dehydrogenase E1 component KS08_RS09545 PF02779 Transketolase, pyrimidine binding domain KS08_RS09545 PF16870 2-oxoglutarate dehydrogenase C-terminal KS08_RS09550 PF00092 von Willebrand factor type A domain KS08_RS09555 PF07728 AAA domain (dynein-related subfamily) KS08_RS09560 PF13627 Prokaryotic lipoprotein-attachment site KS08_RS09560 PF00080 Copper/zinc superoxide dismutase (SODC) KS08_RS09565 PF00877 NlpC/P60 family KS08_RS09565 PF01476 LysM domain KS08_RS09570 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KS08_RS09575 PF10372 Bacterial membrane-spanning protein N-terminus KS08_RS09575 PF02457 DisA bacterial checkpoint controller nucleotide-binding KS08_RS09580 PF01554 MatE KS08_RS09585 PF01740 STAS domain KS08_RS09590 PF02585 GlcNAc-PI de-N-acetylase KS08_RS09595 PF08830 Protein of unknown function (DUF1806) KS08_RS09605 PF00892 EamA-like transporter family KS08_RS09620 PF14552 Tautomerase enzyme KS08_RS09630 PF01638 HxlR-like helix-turn-helix KS08_RS09635 PF00881 Nitroreductase family KS08_RS09640 PF01738 Dienelactone hydrolase family KS08_RS09645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS09650 PF11755 Protein of unknown function (DUF3311) KS08_RS09655 PF00474 Sodium:solute symporter family KS08_RS09665 PF00232 Glycosyl hydrolase family 1 KS08_RS09670 PF00392 Bacterial regulatory proteins, gntR family KS08_RS09670 PF07702 UTRA domain KS08_RS09675 PF01471 Putative peptidoglycan binding domain KS08_RS09675 PF03572 Peptidase family S41 KS08_RS09675 PF17820 PDZ domain KS08_RS09680 PF08241 Methyltransferase domain KS08_RS09690 PF02557 D-alanyl-D-alanine carboxypeptidase KS08_RS09695 PF01048 Phosphorylase superfamily KS08_RS09700 PF14191 YodL-like KS08_RS09705 PF01569 PAP2 superfamily KS08_RS09720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS09725 PF06855 YozE SAM-like fold KS08_RS09730 PF14122 YokU-like protein, putative antitoxin KS08_RS09735 PF12544 Lysine-2,3-aminomutase KS08_RS09740 PF00583 Acetyltransferase (GNAT) family KS08_RS09745 PF01546 Peptidase family M20/M25/M40 KS08_RS09745 PF07687 Peptidase dimerisation domain KS08_RS09750 PF01144 Coenzyme A transferase KS08_RS09755 PF01144 Coenzyme A transferase KS08_RS09760 PF00202 Aminotransferase class-III KS08_RS09770 PF06445 GyrI-like small molecule binding domain KS08_RS09780 PF00583 Acetyltransferase (GNAT) family KS08_RS09785 PF00535 Glycosyl transferase family 2 KS08_RS09800 PF12996 DUF based on E. rectale Gene description (DUF3880) KS08_RS09805 PF02333 Phytase KS08_RS09810 PF08485 Polysaccharide biosynthesis protein C-terminal KS08_RS09810 PF02719 Polysaccharide biosynthesis protein KS08_RS09820 PF01070 FMN-dependent dehydrogenase KS08_RS09835 PF00239 Resolvase, N terminal domain KS08_RS09835 PF07508 Recombinase KS08_RS09840 PF02719 Polysaccharide biosynthesis protein KS08_RS09845 PF01641 SelR domain KS08_RS09850 PF01625 Peptide methionine sulfoxide reductase KS08_RS09855 PF01047 MarR family KS08_RS09860 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) KS08_RS09865 PF13472 GDSL-like Lipase/Acylhydrolase family KS08_RS09870 PF02630 SCO1/SenC KS08_RS09875 PF10751 Protein of unknown function (DUF2535) KS08_RS09880 PF00291 Pyridoxal-phosphate dependent enzyme KS08_RS09880 PF00585 C-terminal regulatory domain of Threonine dehydratase KS08_RS09885 PF08461 Ribonuclease R winged-helix domain KS08_RS09885 PF00158 Sigma-54 interaction domain KS08_RS09890 PF03006 Haemolysin-III related KS08_RS09900 PF00186 Dihydrofolate reductase KS08_RS09905 PF00303 Thymidylate synthase KS08_RS09910 PF14005 YpjP-like protein KS08_RS09915 PF04445 Putative SAM-dependent methyltransferase KS08_RS09920 PF06491 Disulphide isomerase KS08_RS09925 PF00920 Dehydratase family KS08_RS09930 PF08712 Scaffold protein Nfu/NifU N terminal KS08_RS09930 PF13769 Virulence factor KS08_RS09935 PF01966 HD domain KS08_RS09940 PF00255 Glutathione peroxidase KS08_RS09945 PF04204 Homoserine O-succinyltransferase KS08_RS09950 PF00534 Glycosyl transferases group 1 KS08_RS09950 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KS08_RS09955 PF00313 'Cold-shock' DNA-binding domain KS08_RS09965 PF10819 Protein of unknown function (DUF2564) KS08_RS09970 PF10782 Zinc-finger KS08_RS09975 PF13456 Reverse transcriptase-like KS08_RS09980 PF02592 Putative vitamin uptake transporter KS08_RS09985 PF13456 Reverse transcriptase-like KS08_RS09995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KS08_RS09995 PF01367 5'-3' exonuclease, C-terminal SAM fold KS08_RS10000 PF10752 Protein of unknown function (DUF2533) KS08_RS10005 PF00350 Dynamin family KS08_RS10010 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family KS08_RS10015 PF00195 Chalcone and stilbene synthases, N-terminal domain KS08_RS10015 PF02797 Chalcone and stilbene synthases, C-terminal domain KS08_RS10035 PF00860 Permease family KS08_RS10045 PF13443 Cro/C1-type HTH DNA-binding domain KS08_RS10070 PF00186 Dihydrofolate reductase KS08_RS10075 PF00303 Thymidylate synthase KS08_RS10095 PF00692 dUTPase KS08_RS10125 PF13392 HNH endonuclease KS08_RS10130 PF00268 Ribonucleotide reductase, small chain KS08_RS10145 PF14528 LAGLIDADG-like domain KS08_RS10145 PF02867 Ribonucleotide reductase, barrel domain KS08_RS10145 PF00317 Ribonucleotide reductase, all-alpha domain KS08_RS10145 PF08343 Ribonucleotide reductase N-terminal KS08_RS10150 PF08343 Ribonucleotide reductase N-terminal KS08_RS10150 PF02867 Ribonucleotide reductase, barrel domain KS08_RS10150 PF14528 LAGLIDADG-like domain KS08_RS10150 PF00317 Ribonucleotide reductase, all-alpha domain KS08_RS10155 PF07972 NrdI Flavodoxin like KS08_RS10235 PF00145 C-5 cytosine-specific DNA methylase KS08_RS10245 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) KS08_RS10250 PF02223 Thymidylate kinase KS08_RS10255 PF09629 YorP protein KS08_RS10260 PF06725 3D domain KS08_RS10270 PF01368 DHH family KS08_RS10270 PF17768 RecJ OB domain KS08_RS10310 PF00149 Calcineurin-like phosphoesterase KS08_RS10315 PF13229 Right handed beta helix region KS08_RS10320 PF05908 Poly-gamma-glutamate hydrolase KS08_RS10355 PF02586 SOS response associated peptidase (SRAP) KS08_RS10360 PF01068 ATP dependent DNA ligase domain KS08_RS10385 PF14037 YoqO-like protein KS08_RS10395 PF01555 DNA methylase KS08_RS10435 PF09643 YopX protein KS08_RS10460 PF09467 Hypothetical protein Yopt KS08_RS10475 PF14072 DNA-sulfur modification-associated KS08_RS10480 PF02899 Phage integrase, N-terminal SAM-like domain KS08_RS10480 PF00589 Phage integrase family KS08_RS10485 PF01381 Helix-turn-helix KS08_RS10570 PF13443 Cro/C1-type HTH DNA-binding domain KS08_RS10580 PF01757 Acyltransferase family KS08_RS10585 PF17094 Uncharacterised protein family (UPF0715) KS08_RS10600 PF09669 Phage regulatory protein Rha (Phage_pRha) KS08_RS10600 PF03374 Phage antirepressor protein KilAC domain KS08_RS10605 PF00580 UvrD/REP helicase N-terminal domain KS08_RS10605 PF13361 UvrD-like helicase C-terminal domain KS08_RS10660 PF00216 Bacterial DNA-binding protein KS08_RS10690 PF14528 LAGLIDADG-like domain KS08_RS10690 PF00521 DNA gyrase/topoisomerase IV, subunit A KS08_RS10780 PF00589 Phage integrase family KS08_RS10780 PF13495 Phage integrase, N-terminal SAM-like domain KS08_RS10795 PF00069 Protein kinase domain KS08_RS10795 PF03793 PASTA domain KS08_RS10825 PF05709 Phage tail protein KS08_RS10830 PF06605 Prophage endopeptidase tail KS08_RS10845 PF12708 Pectate lyase superfamily protein KS08_RS10845 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KS08_RS10850 PF01471 Putative peptidoglycan binding domain KS08_RS10850 PF01510 N-acetylmuramoyl-L-alanine amidase KS08_RS10880 PF11798 IMS family HHH motif KS08_RS10880 PF11799 impB/mucB/samB family C-terminal domain KS08_RS10880 PF00817 impB/mucB/samB family KS08_RS10885 PF08863 YolD-like protein KS08_RS10905 PF04740 LXG domain of WXG superfamily KS08_RS10905 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KS08_RS10920 PF05901 Excalibur calcium-binding domain KS08_RS10920 PF00565 Staphylococcal nuclease homologue KS08_RS10930 PF00860 Permease family KS08_RS10935 PF00156 Phosphoribosyl transferase domain KS08_RS10940 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KS08_RS10945 PF13307 Helicase C-terminal domain KS08_RS10960 PF02926 THUMP domain KS08_RS10960 PF01170 Putative RNA methylase family UPF0020 KS08_RS10965 PF05103 DivIVA protein KS08_RS10970 PF06908 YspA SLOG family KS08_RS10975 PF13482 RNase_H superfamily KS08_RS10980 PF00270 DEAD/DEAH box helicase KS08_RS10980 PF00271 Helicase conserved C-terminal domain KS08_RS10980 PF09369 Domain of unknown function (DUF1998) KS08_RS10985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KS08_RS10995 PF14179 YppG-like protein KS08_RS11000 PF14178 YppF-like protein KS08_RS11005 PF08807 Bacterial domain of unknown function (DUF1798) KS08_RS11020 PF10720 Protein of unknown function (DUF2515) KS08_RS11025 PF03838 Recombination protein U KS08_RS11030 PF00905 Penicillin binding protein transpeptidase domain KS08_RS11030 PF00912 Transglycosylase KS08_RS11040 PF00730 HhH-GPD superfamily base excision DNA repair protein KS08_RS11040 PF10576 Iron-sulfur binding domain of endonuclease III KS08_RS11040 PF00633 Helix-hairpin-helix motif KS08_RS11045 PF07261 Replication initiation and membrane attachment KS08_RS11050 PF00152 tRNA synthetases class II (D, K and N) KS08_RS11050 PF01336 OB-fold nucleic acid binding domain KS08_RS11055 PF00155 Aminotransferase class I and II KS08_RS11060 PF17881 Domain of unknown function (DUF5590) KS08_RS11060 PF03413 Peptidase propeptide and YPEB domain KS08_RS11065 PF13307 Helicase C-terminal domain KS08_RS11065 PF04851 Type III restriction enzyme, res subunit KS08_RS11065 PF00929 Exonuclease KS08_RS11070 PF02261 Aspartate decarboxylase KS08_RS11075 PF02569 Pantoate-beta-alanine ligase KS08_RS11080 PF02548 Ketopantoate hydroxymethyltransferase KS08_RS11085 PF03099 Biotin/lipoate A/B protein ligase family KS08_RS11085 PF02237 Biotin protein ligase C terminal domain KS08_RS11085 PF08279 HTH domain KS08_RS11090 PF12627 Probable RNA and SrmB- binding site of polymerase A KS08_RS11090 PF01743 Poly A polymerase head domain KS08_RS11090 PF13735 tRNA nucleotidyltransferase domain 2 putative KS08_RS11095 PF13439 Glycosyltransferase Family 4 KS08_RS11095 PF00534 Glycosyl transferases group 1 KS08_RS11100 PF02585 GlcNAc-PI de-N-acetylase KS08_RS11105 PF02142 MGS-like domain KS08_RS11110 PF05173 Dihydrodipicolinate reductase, C-terminus KS08_RS11110 PF01113 Dihydrodipicolinate reductase, N-terminus KS08_RS11115 PF03819 MazG nucleotide pyrophosphohydrolase domain KS08_RS11120 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS08_RS11120 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS08_RS11125 PF00190 Cupin KS08_RS11130 PF09577 Sporulation protein YpjB (SpoYpjB) KS08_RS11135 PF07187 Protein of unknown function (DUF1405) KS08_RS11140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KS08_RS11140 PF00032 Cytochrome b(C-terminal)/b6/petD KS08_RS11145 PF00033 Cytochrome b/b6/petB KS08_RS11150 PF00355 Rieske [2Fe-2S] domain KS08_RS11155 PF10673 Protein of unknown function (DUF2487) KS08_RS11160 PF08858 IDEAL domain KS08_RS11160 PF08864 UPF0302 domain KS08_RS11170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KS08_RS11175 PF01842 ACT domain KS08_RS11175 PF02153 Prephenate dehydrogenase KS08_RS11180 PF00155 Aminotransferase class I and II KS08_RS11185 PF00290 Tryptophan synthase alpha chain KS08_RS11190 PF00291 Pyridoxal-phosphate dependent enzyme KS08_RS11195 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KS08_RS11200 PF00218 Indole-3-glycerol phosphate synthase KS08_RS11205 PF02885 Glycosyl transferase family, helical bundle domain KS08_RS11205 PF00591 Glycosyl transferase family, a/b domain KS08_RS11210 PF00425 chorismate binding enzyme KS08_RS11210 PF04715 Anthranilate synthase component I, N terminal region KS08_RS11215 PF07736 Chorismate mutase type I KS08_RS11220 PF01761 3-dehydroquinate synthase KS08_RS11225 PF01264 Chorismate synthase KS08_RS11230 PF03705 CheR methyltransferase, all-alpha domain KS08_RS11230 PF01739 CheR methyltransferase, SAM binding domain KS08_RS11235 PF00334 Nucleoside diphosphate kinase KS08_RS11240 PF00348 Polyprenyl synthetase KS08_RS11245 PF01209 ubiE/COQ5 methyltransferase family KS08_RS11250 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KS08_RS11255 PF02081 Tryptophan RNA-binding attenuator protein KS08_RS11260 PF01227 GTP cyclohydrolase I KS08_RS11265 PF00216 Bacterial DNA-binding protein KS08_RS11270 PF09547 Stage IV sporulation protein A (spore_IV_A) KS08_RS11280 PF10966 Protein of unknown function (DUF2768) KS08_RS11285 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KS08_RS11285 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KS08_RS11290 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KS08_RS11290 PF01926 50S ribosome-binding GTPase KS08_RS11300 PF01070 FMN-dependent dehydrogenase KS08_RS11305 PF00575 S1 RNA binding domain KS08_RS11310 PF02224 Cytidylate kinase KS08_RS11315 PF12945 Flagellar protein YcgR KS08_RS11315 PF07238 PilZ domain KS08_RS11320 PF14620 YpeB sporulation KS08_RS11320 PF03413 Peptidase propeptide and YPEB domain KS08_RS11325 PF01471 Putative peptidoglycan binding domain KS08_RS11325 PF07486 Cell Wall Hydrolase KS08_RS11330 PF13367 PrsW family intramembrane metalloprotease KS08_RS11340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KS08_RS11340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KS08_RS11345 PF05389 Negative regulator of genetic competence (MecA) KS08_RS11350 PF00149 Calcineurin-like phosphoesterase KS08_RS11355 PF10864 Protein of unknown function (DUF2663) KS08_RS11360 PF01476 LysM domain KS08_RS11365 PF02517 CPBP intramembrane metalloprotease KS08_RS11370 PF00271 Helicase conserved C-terminal domain KS08_RS11370 PF00270 DEAD/DEAH box helicase KS08_RS11375 PF14493 Helix-turn-helix domain KS08_RS11385 PF12822 ECF transporter, substrate-specific component KS08_RS11390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KS08_RS11390 PF01842 ACT domain KS08_RS11390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KS08_RS11400 PF04542 Sigma-70 region 2 KS08_RS11400 PF08281 Sigma-70, region 4 KS08_RS11405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS11405 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS11405 PF00672 HAMP domain KS08_RS11405 PF18698 Histidine kinase sensor domain KS08_RS11405 PF00989 PAS fold KS08_RS11410 PF00072 Response regulator receiver domain KS08_RS11410 PF00486 Transcriptional regulatory protein, C terminal KS08_RS11415 PF01578 Cytochrome C assembly protein KS08_RS11420 PF05140 ResB-like family KS08_RS11425 PF00578 AhpC/TSA family KS08_RS11430 PF00849 RNA pseudouridylate synthase KS08_RS11430 PF01479 S4 domain KS08_RS11435 PF07670 Nucleoside recognition KS08_RS11440 PF07670 Nucleoside recognition KS08_RS11445 PF00768 D-alanyl-D-alanine carboxypeptidase KS08_RS11445 PF07943 Penicillin-binding protein 5, C-terminal domain KS08_RS11450 PF13047 Protein of unknown function (DUF3907) KS08_RS11455 PF04079 Segregation and condensation complex subunit ScpB KS08_RS11460 PF02616 Segregation and condensation protein ScpA KS08_RS11465 PF03745 Domain of unknown function (DUF309) KS08_RS11470 PF00583 Acetyltransferase (GNAT) family KS08_RS11475 PF00885 6,7-dimethyl-8-ribityllumazine synthase KS08_RS11480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KS08_RS11480 PF00925 GTP cyclohydrolase II KS08_RS11485 PF00677 Lumazine binding domain KS08_RS11490 PF01872 RibD C-terminal domain KS08_RS11490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KS08_RS11500 PF10502 Signal peptidase, peptidase S26 KS08_RS11510 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KS08_RS11515 PF06207 Protein of unknown function (DUF1002) KS08_RS11520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KS08_RS11520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KS08_RS11525 PF03323 Bacillus/Clostridium GerA spore germination protein KS08_RS11530 PF14097 Stage V sporulation protein AE1 KS08_RS11535 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KS08_RS11540 PF07451 Stage V sporulation protein AD (SpoVAD) KS08_RS11545 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KS08_RS11550 PF13782 Stage V sporulation protein AB KS08_RS11555 PF12164 Stage V sporulation protein AA KS08_RS11560 PF04542 Sigma-70 region 2 KS08_RS11560 PF04539 Sigma-70 region 3 KS08_RS11560 PF04545 Sigma-70, region 4 KS08_RS11565 PF13581 Histidine kinase-like ATPase domain KS08_RS11570 PF01740 STAS domain KS08_RS11575 PF00768 D-alanyl-D-alanine carboxypeptidase KS08_RS11575 PF07943 Penicillin-binding protein 5, C-terminal domain KS08_RS11580 PF01048 Phosphorylase superfamily KS08_RS11590 PF02899 Phage integrase, N-terminal SAM-like domain KS08_RS11590 PF00589 Phage integrase family KS08_RS11595 PF14004 Protein of unknown function (DUF4227) KS08_RS11600 PF01475 Ferric uptake regulator family KS08_RS11605 PF01944 Stage II sporulation protein M KS08_RS11620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KS08_RS11620 PF00390 Malic enzyme, N-terminal domain KS08_RS11620 PF03949 Malic enzyme, NAD binding domain KS08_RS11625 PF03553 Na+/H+ antiporter family KS08_RS11630 PF10415 Fumarase C C-terminus KS08_RS11630 PF00206 Lyase KS08_RS11635 PF00710 Asparaginase, N-terminal KS08_RS11635 PF17763 Glutaminase/Asparaginase C-terminal domain KS08_RS11640 PF01381 Helix-turn-helix KS08_RS11650 PF00293 NUDIX domain KS08_RS11655 PF13072 Mother cell inhibitor of FtsZ KS08_RS11660 PF00248 Aldo/keto reductase family KS08_RS11665 PF13025 Protein of unknown function (DUF3886) KS08_RS11670 PF12146 Serine aminopeptidase, S33 KS08_RS11675 PF10827 Protein of unknown function (DUF2552) KS08_RS11680 PF01521 Iron-sulphur cluster biosynthesis KS08_RS11685 PF13673 Acetyltransferase (GNAT) domain KS08_RS11685 PF04229 GrpB protein KS08_RS11690 PF00583 Acetyltransferase (GNAT) family KS08_RS11695 PF00817 impB/mucB/samB family KS08_RS11695 PF11799 impB/mucB/samB family C-terminal domain KS08_RS11700 PF08863 YolD-like protein KS08_RS11705 PF14164 YqzH-like protein KS08_RS11710 PF01594 AI-2E family transporter KS08_RS11715 PF00485 Phosphoribulokinase / Uridine kinase family KS08_RS11720 PF00291 Pyridoxal-phosphate dependent enzyme KS08_RS11725 PF00106 short chain dehydrogenase KS08_RS11730 PF00753 Metallo-beta-lactamase superfamily KS08_RS11735 PF03807 NADP oxidoreductase coenzyme F420-dependent KS08_RS11735 PF14748 Pyrroline-5-carboxylate reductase dimerisation KS08_RS11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS11745 PF03466 LysR substrate binding domain KS08_RS11755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KS08_RS11760 PF12146 Serine aminopeptidase, S33 KS08_RS11765 PF00471 Ribosomal protein L33 KS08_RS11770 PF12706 Beta-lactamase superfamily domain KS08_RS11775 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KS08_RS11775 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KS08_RS11780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KS08_RS11780 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KS08_RS11785 PF11799 impB/mucB/samB family C-terminal domain KS08_RS11785 PF00817 impB/mucB/samB family KS08_RS11785 PF11798 IMS family HHH motif KS08_RS11795 PF02096 60Kd inner membrane protein KS08_RS11800 PF07687 Peptidase dimerisation domain KS08_RS11800 PF01546 Peptidase family M20/M25/M40 KS08_RS11805 PF01039 Carboxyl transferase domain KS08_RS11815 PF03734 L,D-transpeptidase catalytic domain KS08_RS11820 PF06081 Aromatic acid exporter family member 1 KS08_RS11820 PF11728 Putative aromatic acid exporter C-terminal domain KS08_RS11825 PF00005 ABC transporter KS08_RS11830 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS11835 PF00497 Bacterial extracellular solute-binding proteins, family 3 KS08_RS11840 PF06491 Disulphide isomerase KS08_RS11845 PF00781 Diacylglycerol kinase catalytic domain KS08_RS11850 PF02817 e3 binding domain KS08_RS11850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KS08_RS11850 PF00364 Biotin-requiring enzyme KS08_RS11855 PF02780 Transketolase, C-terminal domain KS08_RS11855 PF02779 Transketolase, pyrimidine binding domain KS08_RS11860 PF00676 Dehydrogenase E1 component KS08_RS11865 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS11865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KS08_RS11870 PF00871 Acetokinase family KS08_RS11875 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KS08_RS11875 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KS08_RS11880 PF01515 Phosphate acetyl/butaryl transferase KS08_RS11885 PF02954 Bacterial regulatory protein, Fis family KS08_RS11885 PF00989 PAS fold KS08_RS11885 PF00158 Sigma-54 interaction domain KS08_RS11890 PF11118 Protein of unknown function (DUF2627) KS08_RS11900 PF03972 MmgE/PrpD family KS08_RS11905 PF00285 Citrate synthase, C-terminal domain KS08_RS11910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KS08_RS11910 PF02770 Acyl-CoA dehydrogenase, middle domain KS08_RS11910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KS08_RS11915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KS08_RS11915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KS08_RS11920 PF02803 Thiolase, C-terminal domain KS08_RS11920 PF00108 Thiolase, N-terminal domain KS08_RS11925 PF03009 Glycerophosphoryl diester phosphodiesterase family KS08_RS11930 PF01520 N-acetylmuramoyl-L-alanine amidase KS08_RS11950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KS08_RS11955 PF10676 Spore germination protein gerPA/gerPF KS08_RS11960 PF10676 Spore germination protein gerPA/gerPF KS08_RS11965 PF00842 Alanine racemase, C-terminal domain KS08_RS11965 PF01168 Alanine racemase, N-terminal domain KS08_RS11970 PF00072 Response regulator receiver domain KS08_RS11970 PF08769 Sporulation initiation factor Spo0A C terminal KS08_RS11975 PF17820 PDZ domain KS08_RS11975 PF05580 SpoIVB peptidase S55 KS08_RS11980 PF13476 AAA domain KS08_RS11985 PF02863 Arginine repressor, C-terminal domain KS08_RS11985 PF01316 Arginine repressor, DNA binding domain KS08_RS11990 PF01728 FtsJ-like methyltransferase KS08_RS11990 PF01479 S4 domain KS08_RS11995 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KS08_RS11995 PF02780 Transketolase, C-terminal domain KS08_RS11995 PF02779 Transketolase, pyrimidine binding domain KS08_RS12000 PF00348 Polyprenyl synthetase KS08_RS12005 PF02609 Exonuclease VII small subunit KS08_RS12010 PF13742 OB-fold nucleic acid binding domain KS08_RS12010 PF02601 Exonuclease VII, large subunit KS08_RS12015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KS08_RS12015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KS08_RS12020 PF01029 NusB family KS08_RS12025 PF03780 Asp23 family, cell envelope-related function KS08_RS12030 PF00289 Biotin carboxylase, N-terminal domain KS08_RS12030 PF02785 Biotin carboxylase C-terminal domain KS08_RS12030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KS08_RS12035 PF00364 Biotin-requiring enzyme KS08_RS12040 PF12685 SpoIIIAH-like protein KS08_RS12050 PF09581 Stage III sporulation protein AF (Spore_III_AF) KS08_RS12055 PF09546 Stage III sporulation protein AE (spore_III_AE) KS08_RS12060 PF06686 Stage III sporulation protein AC/AD protein family KS08_RS12065 PF06686 Stage III sporulation protein AC/AD protein family KS08_RS12070 PF09548 Stage III sporulation protein AB (spore_III_AB) KS08_RS12080 PF10942 Protein of unknown function (DUF2619) KS08_RS12085 PF01132 Elongation factor P (EF-P) OB domain KS08_RS12085 PF09285 Elongation factor P, C-terminal KS08_RS12085 PF08207 Elongation factor P (EF-P) KOW-like domain KS08_RS12090 PF01321 Creatinase/Prolidase N-terminal domain KS08_RS12090 PF00557 Metallopeptidase family M24 KS08_RS12095 PF11085 Conserved membrane protein YqhR KS08_RS12100 PF07136 Protein of unknown function (DUF1385) KS08_RS12110 PF01734 Patatin-like phospholipase KS08_RS12115 PF02742 Iron dependent repressor, metal binding and dimerisation domain KS08_RS12115 PF01325 Iron dependent repressor, N-terminal DNA binding domain KS08_RS12120 PF03099 Biotin/lipoate A/B protein ligase family KS08_RS12125 PF00581 Rhodanese-like domain KS08_RS12130 PF02347 Glycine cleavage system P-protein KS08_RS12135 PF02347 Glycine cleavage system P-protein KS08_RS12140 PF01571 Aminomethyltransferase folate-binding domain KS08_RS12140 PF08669 Glycine cleavage T-protein C-terminal barrel domain KS08_RS12145 PF00176 SNF2 family N-terminal domain KS08_RS12145 PF00271 Helicase conserved C-terminal domain KS08_RS12150 PF11079 Bacterial protein YqhG of unknown function KS08_RS12155 PF08671 Anti-repressor SinI KS08_RS12160 PF08671 Anti-repressor SinI KS08_RS12160 PF01381 Helix-turn-helix KS08_RS12165 PF12389 Camelysin metallo-endopeptidase KS08_RS12180 PF13028 Protein of unknown function (DUF3889) KS08_RS12185 PF14038 YqzE-like protein KS08_RS12190 PF14173 ComG operon protein 7 KS08_RS12195 PF15980 Putative Competence protein ComGF KS08_RS12205 PF07963 Prokaryotic N-terminal methylation motif KS08_RS12210 PF07963 Prokaryotic N-terminal methylation motif KS08_RS12215 PF00482 Type II secretion system (T2SS), protein F KS08_RS12220 PF00437 Type II/IV secretion system protein KS08_RS12225 PF01544 CorA-like Mg2+ transporter protein KS08_RS12230 PF01595 Cyclin M transmembrane N-terminal domain KS08_RS12230 PF03471 Transporter associated domain KS08_RS12230 PF00571 CBS domain KS08_RS12235 PF01740 STAS domain KS08_RS12235 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KS08_RS12245 PF03960 ArsC family KS08_RS12250 PF11117 Protein of unknown function (DUF2626) KS08_RS12255 PF00753 Metallo-beta-lactamase superfamily KS08_RS12265 PF01910 Thiamine-binding protein KS08_RS12275 PF00246 Zinc carboxypeptidase KS08_RS12280 PF00480 ROK family KS08_RS12285 PF06014 Bacterial protein of unknown function (DUF910) KS08_RS12290 PF03553 Na+/H+ antiporter family KS08_RS12295 PF01812 5-formyltetrahydrofolate cyclo-ligase family KS08_RS12310 PF00005 ABC transporter KS08_RS12315 PF00005 ABC transporter KS08_RS12320 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS12325 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS12330 PF12849 PBP superfamily domain KS08_RS12335 PF00905 Penicillin binding protein transpeptidase domain KS08_RS12335 PF03717 Penicillin-binding Protein dimerisation domain KS08_RS12340 PF07690 Major Facilitator Superfamily KS08_RS12345 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KS08_RS12345 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KS08_RS12350 PF04306 Protein of unknown function (DUF456) KS08_RS12355 PF06691 Protein of unknown function (DUF1189) KS08_RS12365 PF04551 GcpE protein KS08_RS12380 PF01475 Ferric uptake regulator family KS08_RS12385 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS08_RS12385 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS08_RS12390 PF11116 Protein of unknown function (DUF2624) KS08_RS12395 PF01261 Xylose isomerase-like TIM barrel KS08_RS12400 PF00271 Helicase conserved C-terminal domain KS08_RS12400 PF00270 DEAD/DEAH box helicase KS08_RS12405 PF14181 YqfQ-like protein KS08_RS12410 PF02401 LytB protein KS08_RS12415 PF01784 NIF3 (NGG1p interacting factor 3) KS08_RS12420 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KS08_RS12425 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KS08_RS12430 PF04542 Sigma-70 region 2 KS08_RS12430 PF04539 Sigma-70 region 3 KS08_RS12430 PF00140 Sigma-70 factor, region 1.2 KS08_RS12430 PF04545 Sigma-70, region 4 KS08_RS12430 PF03979 Sigma-70 factor, region 1.1 KS08_RS12435 PF08275 DNA primase catalytic core, N-terminal domain KS08_RS12435 PF01807 CHC2 zinc finger KS08_RS12435 PF10410 DnaB-helicase binding domain of primase KS08_RS12440 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KS08_RS12445 PF03618 Kinase/pyrophosphorylase KS08_RS12450 PF08279 HTH domain KS08_RS12450 PF00571 CBS domain KS08_RS12455 PF02092 Glycyl-tRNA synthetase beta subunit KS08_RS12460 PF02091 Glycyl-tRNA synthetase alpha subunit KS08_RS12465 PF02565 Recombination protein O C terminal KS08_RS12465 PF11967 Recombination protein O N terminal KS08_RS12470 PF07650 KH domain KS08_RS12470 PF01926 50S ribosome-binding GTPase KS08_RS12475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KS08_RS12480 PF01219 Prokaryotic diacylglycerol kinase KS08_RS12485 PF02130 Uncharacterized protein family UPF0054 KS08_RS12490 PF07697 7TM-HD extracellular KS08_RS12490 PF01966 HD domain KS08_RS12490 PF07698 7TM receptor with intracellular HD hydrolase KS08_RS12495 PF02562 PhoH-like protein KS08_RS12500 PF06898 Putative stage IV sporulation protein YqfD KS08_RS12505 PF07873 YabP family KS08_RS12515 PF12127 SigmaW regulon antibacterial KS08_RS12520 PF01972 Serine dehydrogenase proteinase KS08_RS12520 PF01957 NfeD-like C-terminal, partner-binding KS08_RS12525 PF09424 Yqey-like protein KS08_RS12530 PF01165 Ribosomal protein S21 KS08_RS12535 PF02690 Na+/Pi-cotransporter KS08_RS12540 PF04055 Radical SAM superfamily KS08_RS12540 PF01938 TRAM domain KS08_RS12540 PF00919 Uncharacterized protein family UPF0004 KS08_RS12545 PF04452 RNA methyltransferase KS08_RS12555 PF00684 DnaJ central domain KS08_RS12555 PF01556 DnaJ C terminal domain KS08_RS12555 PF00226 DnaJ domain KS08_RS12560 PF00012 Hsp70 protein KS08_RS12565 PF01025 GrpE KS08_RS12570 PF01628 HrcA protein C terminal domain KS08_RS12575 PF06969 HemN C-terminal domain KS08_RS12575 PF04055 Radical SAM superfamily KS08_RS12580 PF00009 Elongation factor Tu GTP binding domain KS08_RS12580 PF00679 Elongation factor G C-terminus KS08_RS12580 PF06421 GTP-binding protein LepA C-terminus KS08_RS12580 PF03144 Elongation factor Tu domain 2 KS08_RS12585 PF12438 Protein of unknown function (DUF3679) KS08_RS12590 PF07454 Stage II sporulation protein P (SpoIIP) KS08_RS12595 PF03418 Germination protease KS08_RS12600 PF01649 Ribosomal protein S20 KS08_RS12605 PF06144 DNA polymerase III, delta subunit KS08_RS12615 PF00753 Metallo-beta-lactamase superfamily KS08_RS12615 PF13567 Domain of unknown function (DUF4131) KS08_RS12615 PF03772 Competence protein KS08_RS12620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KS08_RS12625 PF10531 SLBB domain KS08_RS12630 PF03807 NADP oxidoreductase coenzyme F420-dependent KS08_RS12630 PF14748 Pyrroline-5-carboxylate reductase dimerisation KS08_RS12635 PF13649 Methyltransferase domain KS08_RS12645 PF01966 HD domain KS08_RS12650 PF01467 Cytidylyltransferase-like KS08_RS12655 PF01985 CRS1 / YhbY (CRM) domain KS08_RS12660 PF08501 Shikimate dehydrogenase substrate binding domain KS08_RS12660 PF01488 Shikimate / quinate 5-dehydrogenase KS08_RS12660 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KS08_RS12665 PF01926 50S ribosome-binding GTPase KS08_RS12675 PF08970 Sporulation inhibitor A KS08_RS12680 PF00657 GDSL-like Lipase/Acylhydrolase KS08_RS12685 PF01522 Polysaccharide deacetylase KS08_RS12690 PF01471 Putative peptidoglycan binding domain KS08_RS12690 PF01510 N-acetylmuramoyl-L-alanine amidase KS08_RS12695 PF09335 SNARE associated Golgi protein KS08_RS12710 PF04545 Sigma-70, region 4 KS08_RS12710 PF04542 Sigma-70 region 2 KS08_RS12730 PF04545 Sigma-70, region 4 KS08_RS12730 PF04542 Sigma-70 region 2 KS08_RS12745 PF07690 Major Facilitator Superfamily KS08_RS12750 PF05163 DinB family KS08_RS12765 PF01418 Helix-turn-helix domain, rpiR family KS08_RS12765 PF01380 SIS domain KS08_RS12770 PF01238 Phosphomannose isomerase type I KS08_RS12775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KS08_RS12775 PF02378 Phosphotransferase system, EIIC KS08_RS12775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS08_RS12780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KS08_RS12780 PF08279 HTH domain KS08_RS12780 PF05043 Mga helix-turn-helix domain KS08_RS12780 PF00874 PRD domain KS08_RS12785 PF12706 Beta-lactamase superfamily domain KS08_RS12790 PF04073 Aminoacyl-tRNA editing domain KS08_RS12795 PF03466 LysR substrate binding domain KS08_RS12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS12800 PF07690 Major Facilitator Superfamily KS08_RS12805 PF00067 Cytochrome P450 KS08_RS12805 PF00175 Oxidoreductase NAD-binding domain KS08_RS12805 PF00258 Flavodoxin KS08_RS12805 PF00667 FAD binding domain KS08_RS12810 PF00440 Bacterial regulatory proteins, tetR family KS08_RS12810 PF16295 Tetracyclin repressor-like, C-terminal domain KS08_RS12815 PF08241 Methyltransferase domain KS08_RS12820 PF01226 Formate/nitrite transporter KS08_RS12825 PF10057 Uncharacterized conserved protein (DUF2294) KS08_RS12830 PF00037 4Fe-4S binding domain KS08_RS12830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KS08_RS12830 PF00384 Molybdopterin oxidoreductase KS08_RS12830 PF01568 Molydopterin dinucleotide binding domain KS08_RS12830 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KS08_RS12835 PF07849 Protein of unknown function (DUF1641) KS08_RS12840 PF14143 YrhC-like protein KS08_RS12845 PF01053 Cys/Met metabolism PLP-dependent enzyme KS08_RS12850 PF00291 Pyridoxal-phosphate dependent enzyme KS08_RS12855 PF01048 Phosphorylase superfamily KS08_RS12860 PF13649 Methyltransferase domain KS08_RS12865 PF10750 Protein of unknown function (DUF2536) KS08_RS12870 PF07423 Domain of unknown function (DUF1510) KS08_RS12875 PF00905 Penicillin binding protein transpeptidase domain KS08_RS12875 PF03717 Penicillin-binding Protein dimerisation domain KS08_RS12880 PF01272 Transcription elongation factor, GreA/GreB, C-term KS08_RS12880 PF03449 Transcription elongation factor, N-terminal KS08_RS12885 PF00485 Phosphoribulokinase / Uridine kinase family KS08_RS12890 PF01136 Peptidase family U32 KS08_RS12890 PF16325 Peptidase family U32 C-terminal domain KS08_RS12895 PF01136 Peptidase family U32 KS08_RS12900 PF01596 O-methyltransferase KS08_RS12905 PF02618 YceG-like family KS08_RS12910 PF06949 Protein of unknown function (DUF1292) KS08_RS12915 PF03652 Holliday junction resolvase KS08_RS12920 PF06135 IreB regulatory phosphoprotein KS08_RS12925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KS08_RS12925 PF01411 tRNA synthetases class II (A) KS08_RS12925 PF02272 DHHA1 domain KS08_RS12930 PF01594 AI-2E family transporter KS08_RS12935 PF00005 ABC transporter KS08_RS12940 PF00497 Bacterial extracellular solute-binding proteins, family 3 KS08_RS12945 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS12950 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS12960 PF05239 PRC-barrel domain KS08_RS12965 PF14490 Helix-hairpin-helix containing domain KS08_RS12965 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KS08_RS12965 PF13538 UvrD-like helicase C-terminal domain KS08_RS12970 PF07719 Tetratricopeptide repeat KS08_RS12970 PF13181 Tetratricopeptide repeat KS08_RS12980 PF00266 Aminotransferase class-V KS08_RS12985 PF02082 Transcriptional regulator KS08_RS12990 PF16193 AAA C-terminal domain KS08_RS12990 PF12002 MgsA AAA+ ATPase C terminal KS08_RS12990 PF05496 Holliday junction DNA helicase RuvB P-loop domain KS08_RS12995 PF00899 ThiF family KS08_RS13000 PF00152 tRNA synthetases class II (D, K and N) KS08_RS13000 PF02938 GAD domain KS08_RS13000 PF01336 OB-fold nucleic acid binding domain KS08_RS13005 PF03129 Anticodon binding domain KS08_RS13005 PF13393 Histidyl-tRNA synthetase KS08_RS13015 PF08239 Bacterial SH3 domain KS08_RS13015 PF01520 N-acetylmuramoyl-L-alanine amidase KS08_RS13020 PF02580 D-Tyr-tRNA(Tyr) deacylase KS08_RS13025 PF02824 TGS domain KS08_RS13025 PF04607 Region found in RelA / SpoT proteins KS08_RS13025 PF13291 ACT domain KS08_RS13030 PF00156 Phosphoribosyl transferase domain KS08_RS13035 PF02272 DHHA1 domain KS08_RS13035 PF01368 DHH family KS08_RS13035 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KS08_RS13035 PF17768 RecJ OB domain KS08_RS13040 PF06305 Lipopolysaccharide assembly protein A domain KS08_RS13045 PF02080 TrkA-C domain KS08_RS13050 PF07549 SecD/SecF GG Motif KS08_RS13050 PF02355 Protein export membrane protein KS08_RS13055 PF13797 Post-transcriptional regulator KS08_RS13060 PF01943 Polysaccharide biosynthesis protein KS08_RS13060 PF14667 Polysaccharide biosynthesis C-terminal domain KS08_RS13065 PF04239 Protein of unknown function (DUF421) KS08_RS13070 PF12670 Protein of unknown function (DUF3792) KS08_RS13075 PF02699 Preprotein translocase subunit KS08_RS13080 PF01702 Queuine tRNA-ribosyltransferase KS08_RS13085 PF02547 Queuosine biosynthesis protein KS08_RS13090 PF11146 Protein of unknown function (DUF2905) KS08_RS13095 PF17864 RuvB AAA lid domain KS08_RS13095 PF05496 Holliday junction DNA helicase RuvB P-loop domain KS08_RS13095 PF05491 RuvB C-terminal winged helix domain KS08_RS13100 PF01330 RuvA N terminal domain KS08_RS13100 PF07499 RuvA, C-terminal domain KS08_RS13105 PF08977 Bypass of Forespore C, N terminal KS08_RS13105 PF08955 BofC C-terminal domain KS08_RS13110 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KS08_RS13115 PF01476 LysM domain KS08_RS13120 PF02445 Quinolinate synthetase A protein KS08_RS13125 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KS08_RS13125 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KS08_RS13130 PF00890 FAD binding domain KS08_RS13130 PF02910 Fumarate reductase flavoprotein C-term KS08_RS13135 PF00266 Aminotransferase class-V KS08_RS13140 PF08279 HTH domain KS08_RS13140 PF02829 3H domain KS08_RS13145 PF01842 ACT domain KS08_RS13145 PF00800 Prephenate dehydratase KS08_RS13150 PF01842 ACT domain KS08_RS13155 PF09269 Domain of unknown function (DUF1967) KS08_RS13155 PF01018 GTP1/OBG KS08_RS13155 PF01926 50S ribosome-binding GTPase KS08_RS13160 PF14682 Sporulation initiation phospho-transferase B, C-terminal KS08_RS13160 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KS08_RS13165 PF01016 Ribosomal L27 protein KS08_RS13170 PF04327 Cysteine protease Prp KS08_RS13175 PF00829 Ribosomal prokaryotic L21 protein KS08_RS13180 PF02163 Peptidase family M50 KS08_RS13185 PF01551 Peptidase family M23 KS08_RS13190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KS08_RS13195 PF03775 Septum formation inhibitor MinC, C-terminal domain KS08_RS13200 PF04093 rod shape-determining protein MreD KS08_RS13205 PF04085 rod shape-determining protein MreC KS08_RS13215 PF04002 RadC-like JAB domain KS08_RS13220 PF02545 Maf-like protein KS08_RS13225 PF05036 Sporulation related domain KS08_RS13230 PF01478 Type IV leader peptidase family KS08_RS13230 PF06750 Bacterial Peptidase A24 N-terminal domain KS08_RS13235 PF02875 Mur ligase family, glutamate ligase domain KS08_RS13235 PF08245 Mur ligase middle domain KS08_RS13240 PF10458 Valyl tRNA synthetase tRNA binding arm KS08_RS13240 PF00133 tRNA synthetases class I (I, L, M and V) KS08_RS13240 PF08264 Anticodon-binding domain of tRNA KS08_RS13255 PF01476 LysM domain KS08_RS13260 PF00202 Aminotransferase class-III KS08_RS13265 PF00490 Delta-aminolevulinic acid dehydratase KS08_RS13270 PF02602 Uroporphyrinogen-III synthase HemD KS08_RS13275 PF03900 Porphobilinogen deaminase, C-terminal domain KS08_RS13275 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KS08_RS13280 PF01578 Cytochrome C assembly protein KS08_RS13285 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KS08_RS13285 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KS08_RS13285 PF01488 Shikimate / quinate 5-dehydrogenase KS08_RS13295 PF01926 50S ribosome-binding GTPase KS08_RS13300 PF02190 ATP-dependent protease La (LON) substrate-binding domain KS08_RS13300 PF05362 Lon protease (S16) C-terminal proteolytic domain KS08_RS13300 PF00004 ATPase family associated with various cellular activities (AAA) KS08_RS13305 PF05362 Lon protease (S16) C-terminal proteolytic domain KS08_RS13305 PF00004 ATPase family associated with various cellular activities (AAA) KS08_RS13310 PF10431 C-terminal, D2-small domain, of ClpB protein KS08_RS13310 PF07724 AAA domain (Cdc48 subfamily) KS08_RS13310 PF06689 ClpX C4-type zinc finger KS08_RS13315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KS08_RS13315 PF05698 Bacterial trigger factor protein (TF) C-terminus KS08_RS13315 PF05697 Bacterial trigger factor protein (TF) KS08_RS13325 PF00694 Aconitase C-terminal domain KS08_RS13330 PF00330 Aconitase family (aconitate hydratase) KS08_RS13335 PF00180 Isocitrate/isopropylmalate dehydrogenase KS08_RS13340 PF08502 LeuA allosteric (dimerisation) domain KS08_RS13340 PF00682 HMGL-like KS08_RS13345 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KS08_RS13345 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KS08_RS13350 PF10369 Small subunit of acetolactate synthase KS08_RS13350 PF01842 ACT domain KS08_RS13355 PF00205 Thiamine pyrophosphate enzyme, central domain KS08_RS13355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KS08_RS13355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KS08_RS13380 PF12850 Calcineurin-like phosphoesterase superfamily domain KS08_RS13385 PF01725 Ham1 family KS08_RS13390 PF03725 3' exoribonuclease family, domain 2 KS08_RS13390 PF01138 3' exoribonuclease family, domain 1 KS08_RS13395 PF10646 Sporulation and spore germination KS08_RS13400 PF01177 Asp/Glu/Hydantoin racemase KS08_RS13405 PF01047 MarR family KS08_RS13410 PF00196 Bacterial regulatory proteins, luxR family KS08_RS13415 PF03061 Thioesterase superfamily KS08_RS13420 PF13183 4Fe-4S dicluster domain KS08_RS13420 PF13085 2Fe-2S iron-sulfur cluster binding domain KS08_RS13425 PF02910 Fumarate reductase flavoprotein C-term KS08_RS13425 PF00890 FAD binding domain KS08_RS13430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KS08_RS13435 PF10702 Protein of unknown function (DUF2507) KS08_RS13440 PF01842 ACT domain KS08_RS13440 PF13840 ACT domain KS08_RS13440 PF00696 Amino acid kinase family KS08_RS13445 PF08459 UvrC Helix-hairpin-helix N-terminal KS08_RS13445 PF02151 UvrB/uvrC motif KS08_RS13445 PF01541 GIY-YIG catalytic domain KS08_RS13450 PF00085 Thioredoxin KS08_RS13455 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KS08_RS13460 PF00766 Electron transfer flavoprotein FAD-binding domain KS08_RS13460 PF01012 Electron transfer flavoprotein domain KS08_RS13465 PF01012 Electron transfer flavoprotein domain KS08_RS13470 PF00378 Enoyl-CoA hydratase/isomerase KS08_RS13475 PF08359 YsiA-like protein, C-terminal region KS08_RS13475 PF00440 Bacterial regulatory proteins, tetR family KS08_RS13480 PF13193 AMP-binding enzyme C-terminal domain KS08_RS13480 PF00501 AMP-binding enzyme KS08_RS13485 PF10924 Protein of unknown function (DUF2711) KS08_RS13490 PF03994 Domain of Unknown Function (DUF350) KS08_RS13495 PF00488 MutS domain V KS08_RS13495 PF01713 Smr domain KS08_RS13500 PF14791 DNA polymerase beta thumb KS08_RS13500 PF14716 Helix-hairpin-helix domain KS08_RS13500 PF02811 PHP domain KS08_RS13505 PF02674 Colicin V production protein KS08_RS13510 PF05164 Cell division protein ZapA KS08_RS13515 PF11858 Domain of unknown function (DUF3378) KS08_RS13515 PF01351 Ribonuclease HII KS08_RS13520 PF03483 B3/4 domain KS08_RS13520 PF03484 tRNA synthetase B5 domain KS08_RS13520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KS08_RS13520 PF01588 Putative tRNA binding domain KS08_RS13520 PF03147 Ferredoxin-fold anticodon binding domain KS08_RS13525 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KS08_RS13525 PF01409 tRNA synthetases class II core domain (F) KS08_RS13530 PF00588 SpoU rRNA Methylase family KS08_RS13530 PF08032 RNA 2'-O ribose methyltransferase substrate binding KS08_RS13535 PF14098 Small, acid-soluble spore protein I KS08_RS13540 PF05651 Putative sugar diacid recognition KS08_RS13540 PF17853 GGDEF-like domain KS08_RS13540 PF13556 PucR C-terminal helix-turn-helix domain KS08_RS13545 PF01565 FAD binding domain KS08_RS13545 PF02913 FAD linked oxidases, C-terminal domain KS08_RS13550 PF13183 4Fe-4S dicluster domain KS08_RS13550 PF02754 Cysteine-rich domain KS08_RS13555 PF02554 Carbon starvation protein CstA KS08_RS13555 PF13722 5TM C-terminal transporter carbon starvation CstA KS08_RS13560 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KS08_RS13565 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS13570 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS13575 PF01547 Bacterial extracellular solute-binding protein KS08_RS13580 PF13685 Iron-containing alcohol dehydrogenase KS08_RS13585 PF13344 Haloacid dehalogenase-like hydrolase KS08_RS13590 PF00596 Class II Aldolase and Adducin N-terminal domain KS08_RS13595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KS08_RS13595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KS08_RS13600 PF11762 L-arabinose isomerase C-terminal domain KS08_RS13600 PF02610 L-arabinose isomerase KS08_RS13605 PF04616 Glycosyl hydrolases family 43 KS08_RS13610 PF05343 M42 glutamyl aminopeptidase KS08_RS13620 PF06961 Protein of unknown function (DUF1294) KS08_RS13625 PF00453 Ribosomal protein L20 KS08_RS13630 PF01632 Ribosomal protein L35 KS08_RS13635 PF00707 Translation initiation factor IF-3, C-terminal domain KS08_RS13635 PF05198 Translation initiation factor IF-3, N-terminal domain KS08_RS13640 PF04172 LrgB-like family KS08_RS13645 PF03788 LrgA family KS08_RS13650 PF04397 LytTr DNA-binding domain KS08_RS13650 PF00072 Response regulator receiver domain KS08_RS13655 PF07694 5TMR of 5TMR-LYT KS08_RS13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS13655 PF06580 Histidine kinase KS08_RS13660 PF13419 Haloacid dehalogenase-like hydrolase KS08_RS13665 PF03129 Anticodon binding domain KS08_RS13665 PF02824 TGS domain KS08_RS13665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KS08_RS13665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KS08_RS13670 PF08812 YtxC-like family KS08_RS13675 PF09335 SNARE associated Golgi protein KS08_RS13680 PF01695 IstB-like ATP binding protein KS08_RS13680 PF07319 Primosomal protein DnaI N-terminus KS08_RS13685 PF07261 Replication initiation and membrane attachment KS08_RS13690 PF03477 ATP cone domain KS08_RS13695 PF02675 S-adenosylmethionine decarboxylase KS08_RS13700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KS08_RS13700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KS08_RS13705 PF01638 HxlR-like helix-turn-helix KS08_RS13710 PF07690 Major Facilitator Superfamily KS08_RS13715 PF00248 Aldo/keto reductase family KS08_RS13720 PF01121 Dephospho-CoA kinase KS08_RS13725 PF02659 Putative manganese efflux pump KS08_RS13730 PF06827 Zinc finger found in FPG and IleRS KS08_RS13730 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KS08_RS13730 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KS08_RS13735 PF00476 DNA polymerase family A KS08_RS13735 PF01367 5'-3' exonuclease, C-terminal SAM fold KS08_RS13735 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KS08_RS13740 PF16736 Single Cache-like KS08_RS13740 PF00989 PAS fold KS08_RS13740 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS13740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS13745 PF00486 Transcriptional regulatory protein, C terminal KS08_RS13745 PF00072 Response regulator receiver domain KS08_RS13750 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KS08_RS13750 PF00056 lactate/malate dehydrogenase, NAD binding domain KS08_RS13755 PF00180 Isocitrate/isopropylmalate dehydrogenase KS08_RS13760 PF00285 Citrate synthase, C-terminal domain KS08_RS13765 PF04284 Protein of unknown function (DUF441) KS08_RS13770 PF01594 AI-2E family transporter KS08_RS13775 PF04186 FxsA cytoplasmic membrane protein KS08_RS13780 PF02887 Pyruvate kinase, alpha/beta domain KS08_RS13780 PF00224 Pyruvate kinase, barrel domain KS08_RS13780 PF00391 PEP-utilising enzyme, mobile domain KS08_RS13785 PF00365 Phosphofructokinase KS08_RS13790 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KS08_RS13795 PF01039 Carboxyl transferase domain KS08_RS13795 PF17848 Acetyl-coA carboxylase zinc finger domain KS08_RS13805 PF00390 Malic enzyme, N-terminal domain KS08_RS13805 PF03949 Malic enzyme, NAD binding domain KS08_RS13810 PF07733 Bacterial DNA polymerase III alpha NTPase domain KS08_RS13810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KS08_RS13810 PF14579 Helix-hairpin-helix motif KS08_RS13810 PF01336 OB-fold nucleic acid binding domain KS08_RS13810 PF02811 PHP domain KS08_RS13815 PF14034 Sporulation protein YtrH KS08_RS13830 PF02272 DHHA1 domain KS08_RS13830 PF01368 DHH family KS08_RS13835 PF14007 YtpI-like protein KS08_RS13840 PF00392 Bacterial regulatory proteins, gntR family KS08_RS13840 PF07085 DRTGG domain KS08_RS13840 PF00571 CBS domain KS08_RS13840 PF03061 Thioesterase superfamily KS08_RS13855 PF00206 Lyase KS08_RS13855 PF14698 Argininosuccinate lyase C-terminal KS08_RS13860 PF00764 Arginosuccinate synthase KS08_RS13865 PF00994 Probable molybdopterin binding domain KS08_RS13870 PF00871 Acetokinase family KS08_RS13875 PF02384 N-6 DNA Methylase KS08_RS13880 PF08534 Redoxin KS08_RS13885 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KS08_RS13890 PF11167 Protein of unknown function (DUF2953) KS08_RS13895 PF06271 RDD family KS08_RS13900 PF01343 Peptidase family S49 KS08_RS13905 PF01513 ATP-NAD kinase KS08_RS13910 PF07969 Amidohydrolase family KS08_RS13915 PF00501 AMP-binding enzyme KS08_RS13915 PF13193 AMP-binding enzyme C-terminal domain KS08_RS13920 PF00269 Small, acid-soluble spore proteins, alpha/beta type KS08_RS13925 PF02926 THUMP domain KS08_RS13925 PF02568 Thiamine biosynthesis protein (ThiI) KS08_RS13930 PF00266 Aminotransferase class-V KS08_RS13935 PF05525 Branched-chain amino acid transport protein KS08_RS13940 PF06160 Septation ring formation regulator, EzrA KS08_RS13945 PF02811 PHP domain KS08_RS13950 PF00440 Bacterial regulatory proteins, tetR family KS08_RS13955 PF13185 GAF domain KS08_RS13960 PF00990 Diguanylate cyclase, GGDEF domain KS08_RS13965 PF00163 Ribosomal protein S4/S9 N-terminal domain KS08_RS13965 PF01479 S4 domain KS08_RS13970 PF00175 Oxidoreductase NAD-binding domain KS08_RS13970 PF00042 Globin KS08_RS13970 PF00970 Oxidoreductase FAD-binding domain KS08_RS13980 PF01965 DJ-1/PfpI family KS08_RS13995 PF01545 Cation efflux family KS08_RS13995 PF16916 Dimerisation domain of Zinc Transporter KS08_RS14000 PF11495 Archaeal transcriptional regulator TrmB KS08_RS14000 PF01978 Sugar-specific transcriptional regulator TrmB KS08_RS14005 PF03591 AzlC protein KS08_RS14015 PF00579 tRNA synthetases class I (W and Y) KS08_RS14015 PF01479 S4 domain KS08_RS14020 PF00501 AMP-binding enzyme KS08_RS14020 PF13193 AMP-binding enzyme C-terminal domain KS08_RS14025 PF00583 Acetyltransferase (GNAT) family KS08_RS14030 PF00571 CBS domain KS08_RS14035 PF00850 Histone deacetylase domain KS08_RS14040 PF13677 Membrane MotB of proton-channel complex MotA/MotB KS08_RS14040 PF00691 OmpA family KS08_RS14045 PF01618 MotA/TolQ/ExbB proton channel family KS08_RS14050 PF00356 Bacterial regulatory proteins, lacI family KS08_RS14055 PF01817 Chorismate mutase type II KS08_RS14055 PF00793 DAHP synthetase I family KS08_RS14060 PF11009 Protein of unknown function (DUF2847) KS08_RS14065 PF12732 YtxH-like protein KS08_RS14070 PF06103 Bacterial protein of unknown function (DUF948) KS08_RS14075 PF08245 Mur ligase middle domain KS08_RS14075 PF02875 Mur ligase family, glutamate ligase domain KS08_RS14075 PF01225 Mur ligase family, catalytic domain KS08_RS14080 PF17854 FtsK alpha domain KS08_RS14080 PF09397 Ftsk gamma domain KS08_RS14080 PF01580 FtsK/SpoIIIE family KS08_RS14085 PF14794 Domain of unknown function (DUF4479) KS08_RS14085 PF01588 Putative tRNA binding domain KS08_RS14090 PF07285 Protein of unknown function (DUF1444) KS08_RS14095 PF00085 Thioredoxin KS08_RS14100 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ KS08_RS14105 PF05343 M42 glutamyl aminopeptidase KS08_RS14110 PF03413 Peptidase propeptide and YPEB domain KS08_RS14115 PF00390 Malic enzyme, N-terminal domain KS08_RS14115 PF03949 Malic enzyme, NAD binding domain KS08_RS14120 PF00753 Metallo-beta-lactamase superfamily KS08_RS14125 PF02390 Putative methyltransferase KS08_RS14130 PF14165 YtzH-like protein KS08_RS14135 PF01636 Phosphotransferase enzyme family KS08_RS14140 PF00781 Diacylglycerol kinase catalytic domain KS08_RS14155 PF00291 Pyridoxal-phosphate dependent enzyme KS08_RS14160 PF01546 Peptidase family M20/M25/M40 KS08_RS14165 PF00860 Permease family KS08_RS14170 PF05975 Bacterial ABC transporter protein EcsB KS08_RS14175 PF00005 ABC transporter KS08_RS14180 PF08220 DeoR-like helix-turn-helix domain KS08_RS14185 PF01479 S4 domain KS08_RS14185 PF00849 RNA pseudouridylate synthase KS08_RS14190 PF01943 Polysaccharide biosynthesis protein KS08_RS14190 PF14667 Polysaccharide biosynthesis C-terminal domain KS08_RS14200 PF02028 BCCT, betaine/carnitine/choline family transporter KS08_RS14205 PF10957 Sporulation protein Cse60 KS08_RS14210 PF00356 Bacterial regulatory proteins, lacI family KS08_RS14215 PF01547 Bacterial extracellular solute-binding protein KS08_RS14220 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS14225 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS14230 PF11975 Family 4 glycosyl hydrolase C-terminal domain KS08_RS14230 PF02056 Family 4 glycosyl hydrolase KS08_RS14240 PF00581 Rhodanese-like domain KS08_RS14245 PF08264 Anticodon-binding domain of tRNA KS08_RS14245 PF00133 tRNA synthetases class I (I, L, M and V) KS08_RS14245 PF13603 Leucyl-tRNA synthetase, Domain 2 KS08_RS14245 PF09334 tRNA synthetases class I (M) KS08_RS14250 PF14074 Protein of unknown function (DUF4257) KS08_RS14255 PF13426 PAS domain KS08_RS14255 PF01740 STAS domain KS08_RS14260 PF07690 Major Facilitator Superfamily KS08_RS14265 PF09529 Integral membrane protein (intg_mem_TP0381) KS08_RS14270 PF02687 FtsX-like permease family KS08_RS14275 PF00005 ABC transporter KS08_RS14280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS14285 PF00486 Transcriptional regulatory protein, C terminal KS08_RS14285 PF00072 Response regulator receiver domain KS08_RS14290 PF02687 FtsX-like permease family KS08_RS14290 PF12704 MacB-like periplasmic core domain KS08_RS14295 PF00005 ABC transporter KS08_RS14315 PF00005 ABC transporter KS08_RS14320 PF00392 Bacterial regulatory proteins, gntR family KS08_RS14330 PF10732 Protein of unknown function (DUF2524) KS08_RS14335 PF16199 Radical_SAM C-terminal domain KS08_RS14335 PF04055 Radical SAM superfamily KS08_RS14340 PF06962 Putative rRNA methylase KS08_RS14350 PF10776 Protein of unknown function (DUF2600) KS08_RS14355 PF12146 Serine aminopeptidase, S33 KS08_RS14360 PF00132 Bacterial transferase hexapeptide (six repeats) KS08_RS14365 PF00324 Amino acid permease KS08_RS14370 PF13537 Glutamine amidotransferase domain KS08_RS14370 PF00733 Asparagine synthase KS08_RS14375 PF02773 S-adenosylmethionine synthetase, C-terminal domain KS08_RS14375 PF02772 S-adenosylmethionine synthetase, central domain KS08_RS14375 PF00438 S-adenosylmethionine synthetase, N-terminal domain KS08_RS14380 PF01293 Phosphoenolpyruvate carboxykinase KS08_RS14385 PF10763 Protein of unknown function (DUF2584) KS08_RS14390 PF00326 Prolyl oligopeptidase family KS08_RS14400 PF00005 ABC transporter KS08_RS14405 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS14410 PF00293 NUDIX domain KS08_RS14415 PF05105 Bacteriophage holin family KS08_RS14420 PF00210 Ferritin-like domain KS08_RS14430 PF13115 YtkA-like KS08_RS14435 PF02664 S-Ribosylhomocysteinase (LuxS) KS08_RS14440 PF01809 Putative membrane protein insertion efficiency factor KS08_RS14445 PF00484 Carbonic anhydrase KS08_RS14450 PF01197 Ribosomal protein L31 KS08_RS14455 PF01654 Cytochrome bd terminal oxidase subunit I KS08_RS14460 PF02322 Cytochrome bd terminal oxidase subunit II KS08_RS14465 PF13378 Enolase C-terminal domain-like KS08_RS14465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KS08_RS14470 PF00501 AMP-binding enzyme KS08_RS14470 PF13193 AMP-binding enzyme C-terminal domain KS08_RS14475 PF00378 Enoyl-CoA hydratase/isomerase KS08_RS14480 PF00561 alpha/beta hydrolase fold KS08_RS14485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KS08_RS14485 PF16582 Middle domain of thiamine pyrophosphate KS08_RS14485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KS08_RS14490 PF00425 chorismate binding enzyme KS08_RS14495 PF01258 Prokaryotic dksA/traR C4-type zinc finger KS08_RS14500 PF03073 TspO/MBR family KS08_RS14625 PF09515 Thiamine transporter protein (Thia_YuaJ) KS08_RS14630 PF15975 Flotillin KS08_RS14630 PF01145 SPFH domain / Band 7 family KS08_RS14640 PF12867 DinB superfamily KS08_RS14650 PF00465 Iron-containing alcohol dehydrogenase KS08_RS14655 PF00171 Aldehyde dehydrogenase family KS08_RS14665 PF17735 Biofilm surface layer A KS08_RS14670 PF02254 TrkA-N domain KS08_RS14670 PF02080 TrkA-C domain KS08_RS14675 PF13457 GW (Gly-Tryp) dipeptide domain KS08_RS14675 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KS08_RS14680 PF00042 Globin KS08_RS14680 PF00970 Oxidoreductase FAD-binding domain KS08_RS14680 PF00175 Oxidoreductase NAD-binding domain KS08_RS14700 PF13176 Tetratricopeptide repeat KS08_RS14700 PF18801 response regulator aspartate phosphatase H, N terminal KS08_RS14755 PF01510 N-acetylmuramoyl-L-alanine amidase KS08_RS14760 PF05105 Bacteriophage holin family KS08_RS14780 PF12708 Pectate lyase superfamily protein KS08_RS14780 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KS08_RS14795 PF01464 Transglycosylase SLT domain KS08_RS14930 PF00589 Phage integrase family KS08_RS14930 PF14659 Phage integrase, N-terminal SAM-like domain KS08_RS14940 PF02673 Bacitracin resistance protein BacA KS08_RS14945 PF01594 AI-2E family transporter KS08_RS14950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS08_RS14950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS08_RS14955 PF01965 DJ-1/PfpI family KS08_RS14960 PF00672 HAMP domain KS08_RS14960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS08_RS14960 PF02743 Cache domain KS08_RS14965 PF02743 Cache domain KS08_RS14965 PF00672 HAMP domain KS08_RS14965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS08_RS14970 PF00672 HAMP domain KS08_RS14970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS08_RS14970 PF02743 Cache domain KS08_RS14975 PF02743 Cache domain KS08_RS14975 PF00672 HAMP domain KS08_RS14975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS08_RS14990 PF03060 Nitronate monooxygenase KS08_RS14995 PF16657 Maltogenic Amylase, C-terminal domain KS08_RS14995 PF00128 Alpha amylase, catalytic domain KS08_RS15000 PF01595 Cyclin M transmembrane N-terminal domain KS08_RS15000 PF03471 Transporter associated domain KS08_RS15000 PF00571 CBS domain KS08_RS15005 PF04298 Putative neutral zinc metallopeptidase KS08_RS15015 PF11458 Membrane-integrating protein Mistic KS08_RS15020 PF07885 Ion channel KS08_RS15020 PF02254 TrkA-N domain KS08_RS15025 PF08868 YugN-like family KS08_RS15035 PF00342 Phosphoglucose isomerase KS08_RS15040 PF00465 Iron-containing alcohol dehydrogenase KS08_RS15045 PF00465 Iron-containing alcohol dehydrogenase KS08_RS15050 PF04070 Domain of unknown function (DUF378) KS08_RS15055 PF00575 S1 RNA binding domain KS08_RS15060 PF00155 Aminotransferase class I and II KS08_RS15065 PF01037 Lrp/AsnC ligand binding domain KS08_RS15070 PF00561 alpha/beta hydrolase fold KS08_RS15070 PF08386 TAP-like protein KS08_RS15075 PF08958 Domain of unknown function (DUF1871) KS08_RS15080 PF00155 Aminotransferase class I and II KS08_RS15085 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS15085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS15090 PF08810 Kinase associated protein B KS08_RS15095 PF00929 Exonuclease KS08_RS15100 PF07690 Major Facilitator Superfamily KS08_RS15105 PF00905 Penicillin binding protein transpeptidase domain KS08_RS15105 PF00912 Transglycosylase KS08_RS15110 PF04134 Protein of unknown function, DUF393 KS08_RS15115 PF17328 Family of unknown function (DUF5366) KS08_RS15120 PF00989 PAS fold KS08_RS15120 PF17203 Single cache domain 3 KS08_RS15120 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KS08_RS15120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS15125 PF00072 Response regulator receiver domain KS08_RS15130 PF02608 ABC transporter substrate-binding protein PnrA-like KS08_RS15135 PF00005 ABC transporter KS08_RS15140 PF02653 Branched-chain amino acid transport system / permease component KS08_RS15145 PF02653 Branched-chain amino acid transport system / permease component KS08_RS15155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KS08_RS15155 PF13244 Domain of unknown function (DUF4040) KS08_RS15155 PF00361 Proton-conducting membrane transporter KS08_RS15160 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KS08_RS15165 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KS08_RS15170 PF00361 Proton-conducting membrane transporter KS08_RS15175 PF01899 Na+/H+ ion antiporter subunit KS08_RS15180 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KS08_RS15185 PF03334 Na+/H+ antiporter subunit KS08_RS15190 PF03061 Thioesterase superfamily KS08_RS15195 PF00196 Bacterial regulatory proteins, luxR family KS08_RS15195 PF00072 Response regulator receiver domain KS08_RS15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS15200 PF07730 Histidine kinase KS08_RS15210 PF00348 Polyprenyl synthetase KS08_RS15215 PF08181 DegQ (SacQ) family KS08_RS15225 PF08668 HDOD domain KS08_RS15225 PF00563 EAL domain KS08_RS15230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KS08_RS15230 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KS08_RS15230 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KS08_RS15235 PF00857 Isochorismatase family KS08_RS15240 PF07997 Protein of unknown function (DUF1694) KS08_RS15245 PF14166 YueH-like protein KS08_RS15250 PF10676 Spore germination protein gerPA/gerPF KS08_RS15255 PF01594 AI-2E family transporter KS08_RS15260 PF10842 Protein of unknown function (DUF2642) KS08_RS15265 PF01966 HD domain KS08_RS15270 PF00106 short chain dehydrogenase KS08_RS15275 PF17355 Family of unknown function (DUF5383) KS08_RS15285 PF12538 DNA transporter KS08_RS15285 PF01580 FtsK/SpoIIIE family KS08_RS15290 PF10140 WXG100 protein secretion system (Wss), protein YukC KS08_RS15295 PF08817 WXG100 protein secretion system (Wss), protein YukD KS08_RS15300 PF06013 Proteins of 100 residues with WXG KS08_RS15305 PF13556 PucR C-terminal helix-turn-helix domain KS08_RS15305 PF17853 GGDEF-like domain KS08_RS15305 PF06018 CodY GAF-like domain KS08_RS15310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KS08_RS15310 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KS08_RS15315 PF10042 Uncharacterized conserved protein (DUF2278) KS08_RS15320 PF03621 MbtH-like protein KS08_RS15325 PF00501 AMP-binding enzyme KS08_RS15325 PF00668 Condensation domain KS08_RS15325 PF00975 Thioesterase domain KS08_RS15325 PF00550 Phosphopantetheine attachment site KS08_RS15325 PF13193 AMP-binding enzyme C-terminal domain KS08_RS15330 PF00550 Phosphopantetheine attachment site KS08_RS15330 PF00857 Isochorismatase family KS08_RS15335 PF00501 AMP-binding enzyme KS08_RS15335 PF13193 AMP-binding enzyme C-terminal domain KS08_RS15340 PF00425 chorismate binding enzyme KS08_RS15345 PF00106 short chain dehydrogenase KS08_RS15350 PF00756 Putative esterase KS08_RS15355 PF00174 Oxidoreductase molybdopterin binding domain KS08_RS15360 PF02632 BioY family KS08_RS15365 PF03553 Na+/H+ antiporter family KS08_RS15365 PF13726 Na+-H+ antiporter family KS08_RS15370 PF02789 Cytosol aminopeptidase family, N-terminal domain KS08_RS15370 PF00883 Cytosol aminopeptidase family, catalytic domain KS08_RS15375 PF02681 Divergent PAP2 family KS08_RS15380 PF06725 3D domain KS08_RS15385 PF14068 Putative membrane protein KS08_RS15390 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS15395 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS15400 PF00478 IMP dehydrogenase / GMP reductase domain KS08_RS15415 PF00005 ABC transporter KS08_RS15425 PF09221 Bacteriocin class IId cyclical uberolysin-like KS08_RS15445 PF00106 short chain dehydrogenase KS08_RS15465 PF01510 N-acetylmuramoyl-L-alanine amidase KS08_RS15465 PF01476 LysM domain KS08_RS15465 PF01471 Putative peptidoglycan binding domain KS08_RS15470 PF10960 BhlA holin family KS08_RS15490 PF12708 Pectate lyase superfamily protein KS08_RS15490 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KS08_RS15500 PF13457 GW (Gly-Tryp) dipeptide domain KS08_RS15500 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KS08_RS15585 PF00589 Phage integrase family KS08_RS15690 PF02899 Phage integrase, N-terminal SAM-like domain KS08_RS15690 PF00589 Phage integrase family KS08_RS15695 PF01521 Iron-sulphur cluster biosynthesis KS08_RS15700 PF01678 Diaminopimelate epimerase KS08_RS15705 PF07662 Na+ dependent nucleoside transporter C-terminus KS08_RS15705 PF01773 Na+ dependent nucleoside transporter N-terminus KS08_RS15710 PF07293 Protein of unknown function (DUF1450) KS08_RS15715 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS15720 PF07315 Protein of unknown function (DUF1462) KS08_RS15725 PF01106 NifU-like domain KS08_RS15730 PF07676 WD40-like Beta Propeller Repeat KS08_RS15730 PF00326 Prolyl oligopeptidase family KS08_RS15735 PF00288 GHMP kinases N terminal domain KS08_RS15735 PF08544 GHMP kinases C terminal KS08_RS15740 PF00291 Pyridoxal-phosphate dependent enzyme KS08_RS15745 PF01842 ACT domain KS08_RS15745 PF03447 Homoserine dehydrogenase, NAD binding domain KS08_RS15745 PF00742 Homoserine dehydrogenase KS08_RS15755 PF04608 Phosphatidylglycerophosphatase A KS08_RS15760 PF13344 Haloacid dehalogenase-like hydrolase KS08_RS15765 PF01934 Protein of unknown function DUF86 KS08_RS15770 PF06265 Protein of unknown function (DUF1027) KS08_RS15775 PF04055 Radical SAM superfamily KS08_RS15775 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KS08_RS15780 PF01551 Peptidase family M23 KS08_RS15785 PF09560 Sporulation protein YunB (Spo_YunB) KS08_RS15790 PF02872 5'-nucleotidase, C-terminal domain KS08_RS15795 PF01925 Sulfite exporter TauE/SafE KS08_RS15800 PF01904 Protein of unknown function DUF72 KS08_RS15810 PF01979 Amidohydrolase family KS08_RS15815 PF17853 GGDEF-like domain KS08_RS15815 PF07905 Purine catabolism regulatory protein-like family KS08_RS15815 PF13556 PucR C-terminal helix-turn-helix domain KS08_RS15825 PF07690 Major Facilitator Superfamily KS08_RS15830 PF00266 Aminotransferase class-V KS08_RS15835 PF01546 Peptidase family M20/M25/M40 KS08_RS15840 PF04231 Endonuclease I KS08_RS15845 PF03459 TOBE domain KS08_RS15845 PF00005 ABC transporter KS08_RS15845 PF17912 MalK OB fold domain KS08_RS15850 PF00392 Bacterial regulatory proteins, gntR family KS08_RS15850 PF07702 UTRA domain KS08_RS15855 PF00294 pfkB family carbohydrate kinase KS08_RS15860 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS15865 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS15870 PF01547 Bacterial extracellular solute-binding protein KS08_RS15875 PF01380 SIS domain KS08_RS15880 PF13411 MerR HTH family regulatory protein KS08_RS15895 PF17418 Sporulation delaying protein SdpA KS08_RS15900 PF07853 Protein of unknown function (DUF1648) KS08_RS15905 PF01541 GIY-YIG catalytic domain KS08_RS15910 PF01266 FAD dependent oxidoreductase KS08_RS15920 PF10903 Protein of unknown function (DUF2691) KS08_RS15925 PF01374 Glycosyl hydrolase family 46 KS08_RS15930 PF01458 Uncharacterized protein family (UPF0051) KS08_RS15935 PF01592 NifU-like N terminal domain KS08_RS15940 PF00266 Aminotransferase class-V KS08_RS15945 PF01458 Uncharacterized protein family (UPF0051) KS08_RS15950 PF00005 ABC transporter KS08_RS15955 PF02627 Carboxymuconolactone decarboxylase family KS08_RS15960 PF03180 NLPA lipoprotein KS08_RS15965 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS15970 PF09383 NIL domain KS08_RS15970 PF00005 ABC transporter KS08_RS15975 PF02036 SCP-2 sterol transfer family KS08_RS15980 PF00085 Thioredoxin KS08_RS15985 PF01751 Toprim domain KS08_RS15990 PF10830 Protein of unknown function (DUF2553) KS08_RS15995 PF01597 Glycine cleavage H-protein KS08_RS16000 PF03960 ArsC family KS08_RS16005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KS08_RS16005 PF02770 Acyl-CoA dehydrogenase, middle domain KS08_RS16005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KS08_RS16010 PF00108 Thiolase, N-terminal domain KS08_RS16010 PF02803 Thiolase, C-terminal domain KS08_RS16015 PF00378 Enoyl-CoA hydratase/isomerase KS08_RS16015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KS08_RS16015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KS08_RS16020 PF01619 Proline dehydrogenase KS08_RS16030 PF07875 Coat F domain KS08_RS16035 PF01047 MarR family KS08_RS16040 PF07690 Major Facilitator Superfamily KS08_RS16045 PF02923 Restriction endonuclease BamHI KS08_RS16050 PF01381 Helix-turn-helix KS08_RS16055 PF01555 DNA methylase KS08_RS16060 PF10835 Protein of unknown function (DUF2573) KS08_RS16065 PF00005 ABC transporter KS08_RS16070 PF14039 YusW-like protein KS08_RS16080 PF00106 short chain dehydrogenase KS08_RS16085 PF00210 Ferritin-like domain KS08_RS16090 PF13180 PDZ domain KS08_RS16095 PF00486 Transcriptional regulatory protein, C terminal KS08_RS16095 PF00072 Response regulator receiver domain KS08_RS16100 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS16100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS16100 PF00672 HAMP domain KS08_RS16105 PF00440 Bacterial regulatory proteins, tetR family KS08_RS16110 PF00206 Lyase KS08_RS16110 PF10415 Fumarase C C-terminus KS08_RS16115 PF13113 Protein of unknown function (DUF3970) KS08_RS16120 PF03323 Bacillus/Clostridium GerA spore germination protein KS08_RS16125 PF03845 Spore germination protein KS08_RS16130 PF05504 Spore germination B3/ GerAC like, C-terminal KS08_RS16135 PF00196 Bacterial regulatory proteins, luxR family KS08_RS16135 PF00072 Response regulator receiver domain KS08_RS16140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS16140 PF00672 HAMP domain KS08_RS16140 PF07730 Histidine kinase KS08_RS16145 PF09922 Cell wall-active antibiotics response 4TMS YvqF KS08_RS16150 PF13349 Putative adhesin KS08_RS16155 PF04012 PspA/IM30 family KS08_RS16165 PF07690 Major Facilitator Superfamily KS08_RS16170 PF01923 Cobalamin adenosyltransferase KS08_RS16175 PF00005 ABC transporter KS08_RS16180 PF01032 FecCD transport family KS08_RS16185 PF01497 Periplasmic binding protein KS08_RS16190 PF00106 short chain dehydrogenase KS08_RS16195 PF08450 SMP-30/Gluconolactonase/LRE-like region KS08_RS16200 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS16200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS16205 PF00486 Transcriptional regulatory protein, C terminal KS08_RS16205 PF00072 Response regulator receiver domain KS08_RS16215 PF04545 Sigma-70, region 4 KS08_RS16220 PF00190 Cupin KS08_RS16225 PF14184 Regulatory protein YrvL KS08_RS16230 PF00005 ABC transporter KS08_RS16235 PF01032 FecCD transport family KS08_RS16240 PF01032 FecCD transport family KS08_RS16245 PF01497 Periplasmic binding protein KS08_RS16250 PF04072 Leucine carboxyl methyltransferase KS08_RS16255 PF13520 Amino acid permease KS08_RS16260 PF09575 Small spore protein J (Spore_SspJ) KS08_RS16265 PF04307 LexA-binding, inner membrane-associated putative hydrolase KS08_RS16270 PF00884 Sulfatase KS08_RS16275 PF12728 Helix-turn-helix domain KS08_RS16275 PF12727 PBP superfamily domain KS08_RS16285 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS16290 PF00072 Response regulator receiver domain KS08_RS16290 PF00196 Bacterial regulatory proteins, luxR family KS08_RS16300 PF00005 ABC transporter KS08_RS16315 PF00248 Aldo/keto reductase family KS08_RS16325 PF00999 Sodium/hydrogen exchanger family KS08_RS16330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KS08_RS16330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KS08_RS16335 PF00667 FAD binding domain KS08_RS16335 PF00258 Flavodoxin KS08_RS16335 PF00175 Oxidoreductase NAD-binding domain KS08_RS16340 PF13538 UvrD-like helicase C-terminal domain KS08_RS16345 PF03458 UPF0126 domain KS08_RS16355 PF02600 Disulfide bond formation protein DsbB KS08_RS16360 PF13462 Thioredoxin KS08_RS16365 PF00403 Heavy-metal-associated domain KS08_RS16370 PF00403 Heavy-metal-associated domain KS08_RS16375 PF00403 Heavy-metal-associated domain KS08_RS16380 PF02583 Metal-sensitive transcriptional repressor KS08_RS16385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS08_RS16385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS08_RS16390 PF02525 Flavodoxin-like fold KS08_RS16395 PF00296 Luciferase-like monooxygenase KS08_RS16400 PF00462 Glutaredoxin KS08_RS16405 PF00296 Luciferase-like monooxygenase KS08_RS16410 PF00005 ABC transporter KS08_RS16415 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS16420 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS16425 PF00497 Bacterial extracellular solute-binding proteins, family 3 KS08_RS16430 PF00497 Bacterial extracellular solute-binding proteins, family 3 KS08_RS16435 PF00583 Acetyltransferase (GNAT) family KS08_RS16440 PF03466 LysR substrate binding domain KS08_RS16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS16445 PF00106 short chain dehydrogenase KS08_RS16450 PF01337 Barstar (barnase inhibitor) KS08_RS16455 PF01668 SmpB protein KS08_RS16460 PF17876 Cold shock domain KS08_RS16460 PF08206 Ribonuclease B OB domain KS08_RS16460 PF00575 S1 RNA binding domain KS08_RS16460 PF00773 RNB domain KS08_RS16465 PF12146 Serine aminopeptidase, S33 KS08_RS16470 PF03840 Preprotein translocase SecG subunit KS08_RS16475 PF01381 Helix-turn-helix KS08_RS16490 PF01638 HxlR-like helix-turn-helix KS08_RS16495 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS16495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS16500 PF00072 Response regulator receiver domain KS08_RS16500 PF00486 Transcriptional regulatory protein, C terminal KS08_RS16515 PF00005 ABC transporter KS08_RS16520 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS16525 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KS08_RS16530 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS16535 PF00571 CBS domain KS08_RS16535 PF00005 ABC transporter KS08_RS16540 PF12802 MarR family KS08_RS16545 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS16550 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KS08_RS16555 PF00528 Binding-protein-dependent transport system inner membrane component KS08_RS16560 PF00005 ABC transporter KS08_RS16560 PF00571 CBS domain KS08_RS16565 PF12802 MarR family KS08_RS16570 PF01914 MarC family integral membrane protein KS08_RS16585 PF00583 Acetyltransferase (GNAT) family KS08_RS16600 PF02585 GlcNAc-PI de-N-acetylase KS08_RS16615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KS08_RS16620 PF01370 NAD dependent epimerase/dehydratase family KS08_RS16625 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KS08_RS16630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KS08_RS16630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KS08_RS16630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KS08_RS16635 PF02225 PA domain KS08_RS16635 PF04389 Peptidase family M28 KS08_RS16640 PF00113 Enolase, C-terminal TIM barrel domain KS08_RS16640 PF03952 Enolase, N-terminal domain KS08_RS16645 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KS08_RS16645 PF01676 Metalloenzyme superfamily KS08_RS16650 PF00121 Triosephosphate isomerase KS08_RS16655 PF00162 Phosphoglycerate kinase KS08_RS16665 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KS08_RS16665 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KS08_RS16670 PF04198 Putative sugar-binding domain KS08_RS16675 PF00083 Sugar (and other) transporter KS08_RS16680 PF00392 Bacterial regulatory proteins, gntR family KS08_RS16685 PF00296 Luciferase-like monooxygenase KS08_RS16690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS16690 PF03466 LysR substrate binding domain KS08_RS16695 PF00892 EamA-like transporter family KS08_RS16700 PF00324 Amino acid permease KS08_RS16705 PF01418 Helix-turn-helix domain, rpiR family KS08_RS16705 PF01380 SIS domain KS08_RS16710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KS08_RS16710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KS08_RS16715 PF02447 GntP family permease KS08_RS16720 PF02589 LUD domain KS08_RS16725 PF02589 LUD domain KS08_RS16725 PF13183 4Fe-4S dicluster domain KS08_RS16725 PF11870 Domain of unknown function (DUF3390) KS08_RS16730 PF02754 Cysteine-rich domain KS08_RS16735 PF00392 Bacterial regulatory proteins, gntR family KS08_RS16735 PF00155 Aminotransferase class I and II KS08_RS16740 PF00392 Bacterial regulatory proteins, gntR family KS08_RS16740 PF07729 FCD domain KS08_RS16745 PF02652 L-lactate permease KS08_RS16750 PF04963 Sigma-54 factor, core binding domain KS08_RS16750 PF00309 Sigma-54 factor, Activator interacting domain (AID) KS08_RS16750 PF04552 Sigma-54, DNA binding domain KS08_RS16755 PF09628 YvfG protein KS08_RS16760 PF04230 Polysaccharide pyruvyl transferase KS08_RS16765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KS08_RS16770 PF00132 Bacterial transferase hexapeptide (six repeats) KS08_RS16770 PF17836 PglD N-terminal domain KS08_RS16775 PF02397 Bacterial sugar transferase KS08_RS16780 PF14667 Polysaccharide biosynthesis C-terminal domain KS08_RS16780 PF01943 Polysaccharide biosynthesis protein KS08_RS16785 PF00535 Glycosyl transferase family 2 KS08_RS16790 PF04230 Polysaccharide pyruvyl transferase KS08_RS16795 PF00535 Glycosyl transferase family 2 KS08_RS16805 PF00534 Glycosyl transferases group 1 KS08_RS16805 PF13439 Glycosyltransferase Family 4 KS08_RS16810 PF00535 Glycosyl transferase family 2 KS08_RS16815 PF00534 Glycosyl transferases group 1 KS08_RS16815 PF13439 Glycosyltransferase Family 4 KS08_RS16820 PF02719 Polysaccharide biosynthesis protein KS08_RS16825 PF13614 AAA domain KS08_RS16830 PF02706 Chain length determinant protein KS08_RS16835 PF01381 Helix-turn-helix KS08_RS16835 PF08671 Anti-repressor SinI KS08_RS16840 PF00135 Carboxylesterase family KS08_RS16850 PF01872 RibD C-terminal domain KS08_RS16855 PF01494 FAD binding domain KS08_RS16870 PF00583 Acetyltransferase (GNAT) family KS08_RS16875 PF05870 Phenolic acid decarboxylase (PAD) KS08_RS16915 PF08244 Glycosyl hydrolases family 32 C terminal KS08_RS16915 PF00251 Glycosyl hydrolases family 32 N-terminal domain KS08_RS16920 PF01306 LacY proton/sugar symporter KS08_RS16925 PF00356 Bacterial regulatory proteins, lacI family KS08_RS16930 PF00574 Clp protease KS08_RS16935 PF03466 LysR substrate binding domain KS08_RS16935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS16940 PF04303 PrpF protein KS08_RS16945 PF00083 Sugar (and other) transporter KS08_RS16955 PF03641 Possible lysine decarboxylase KS08_RS16960 PF03819 MazG nucleotide pyrophosphohydrolase domain KS08_RS16965 PF00916 Sulfate permease family KS08_RS16965 PF01740 STAS domain KS08_RS16970 PF00484 Carbonic anhydrase KS08_RS16980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KS08_RS16980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KS08_RS16985 PF00545 ribonuclease KS08_RS16990 PF00797 N-acetyltransferase KS08_RS16995 PF00381 PTS HPr component phosphorylation site KS08_RS17000 PF10298 WhiA N-terminal LAGLIDADG-like domain KS08_RS17000 PF14527 WhiA LAGLIDADG-like domain KS08_RS17000 PF02650 WhiA C-terminal HTH domain KS08_RS17005 PF01933 Uncharacterised protein family UPF0052 KS08_RS17010 PF03668 P-loop ATPase protein family KS08_RS17015 PF00293 NUDIX domain KS08_RS17020 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS17025 PF00877 NlpC/P60 family KS08_RS17035 PF00672 HAMP domain KS08_RS17035 PF00989 PAS fold KS08_RS17035 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS17035 PF18698 Histidine kinase sensor domain KS08_RS17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS17040 PF00486 Transcriptional regulatory protein, C terminal KS08_RS17040 PF00072 Response regulator receiver domain KS08_RS17045 PF00664 ABC transporter transmembrane region KS08_RS17045 PF00005 ABC transporter KS08_RS17050 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KS08_RS17050 PF01502 Phosphoribosyl-AMP cyclohydrolase KS08_RS17055 PF00977 Histidine biosynthesis protein KS08_RS17060 PF00977 Histidine biosynthesis protein KS08_RS17065 PF00117 Glutamine amidotransferase class-I KS08_RS17070 PF00475 Imidazoleglycerol-phosphate dehydratase KS08_RS17075 PF00815 Histidinol dehydrogenase KS08_RS17080 PF01634 ATP phosphoribosyltransferase KS08_RS17085 PF13393 Histidyl-tRNA synthetase KS08_RS17090 PF13529 Peptidase_C39 like family KS08_RS17095 PF14602 Hexapeptide repeat of succinyl-transferase KS08_RS17100 PF13419 Haloacid dehalogenase-like hydrolase KS08_RS17105 PF01790 Prolipoprotein diacylglyceryl transferase KS08_RS17110 PF02603 HPr Serine kinase N terminus KS08_RS17110 PF07475 HPr Serine kinase C-terminal domain KS08_RS17115 PF01979 Amidohydrolase family KS08_RS17120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KS08_RS17125 PF00392 Bacterial regulatory proteins, gntR family KS08_RS17125 PF07702 UTRA domain KS08_RS17130 PF00440 Bacterial regulatory proteins, tetR family KS08_RS17135 PF00149 Calcineurin-like phosphoesterase KS08_RS17140 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KS08_RS17145 PF04024 PspC domain KS08_RS17150 PF13349 Putative adhesin KS08_RS17165 PF17760 UvrA interaction domain KS08_RS17165 PF00005 ABC transporter KS08_RS17165 PF17755 UvrA DNA-binding domain KS08_RS17170 PF02151 UvrB/uvrC motif KS08_RS17170 PF04851 Type III restriction enzyme, res subunit KS08_RS17170 PF00271 Helicase conserved C-terminal domain KS08_RS17170 PF12344 Ultra-violet resistance protein B KS08_RS17170 PF17757 UvrB interaction domain KS08_RS17175 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) KS08_RS17180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KS08_RS17180 PF00391 PEP-utilising enzyme, mobile domain KS08_RS17185 PF00440 Bacterial regulatory proteins, tetR family KS08_RS17190 PF07690 Major Facilitator Superfamily KS08_RS17195 PF17735 Biofilm surface layer A KS08_RS17205 PF17820 PDZ domain KS08_RS17210 PF17423 Swarming motility protein KS08_RS17215 PF01471 Putative peptidoglycan binding domain KS08_RS17215 PF17820 PDZ domain KS08_RS17215 PF03572 Peptidase family S41 KS08_RS17220 PF13229 Right handed beta helix region KS08_RS17225 PF18075 FtsX extracellular domain KS08_RS17225 PF02687 FtsX-like permease family KS08_RS17230 PF00005 ABC transporter KS08_RS17235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KS08_RS17240 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS08_RS17240 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS08_RS17245 PF00472 RF-1 domain KS08_RS17245 PF03462 PCRF domain KS08_RS17250 PF07516 SecA Wing and Scaffold domain KS08_RS17250 PF01043 SecA preprotein cross-linking domain KS08_RS17250 PF07517 SecA DEAD-like domain KS08_RS17250 PF02810 SEC-C motif KS08_RS17255 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KS08_RS17255 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KS08_RS17270 PF02561 Flagellar protein FliS KS08_RS17275 PF07195 Flagellar hook-associated protein 2 C-terminus KS08_RS17275 PF07196 Flagellin hook IN motif KS08_RS17275 PF02465 Flagellar hook-associated protein 2 N-terminus KS08_RS17280 PF00669 Bacterial flagellin N-terminal helical region KS08_RS17280 PF00700 Bacterial flagellin C-terminal helical region KS08_RS17285 PF02599 Global regulator protein family KS08_RS17290 PF02623 FliW protein KS08_RS17300 PF00700 Bacterial flagellin C-terminal helical region KS08_RS17300 PF00669 Bacterial flagellin N-terminal helical region KS08_RS17305 PF00460 Flagella basal body rod protein KS08_RS17305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KS08_RS17310 PF05130 FlgN protein KS08_RS17315 PF04316 Anti-sigma-28 factor, FlgM KS08_RS17330 PF10719 Late competence development protein ComFB KS08_RS17335 PF04851 Type III restriction enzyme, res subunit KS08_RS17335 PF00271 Helicase conserved C-terminal domain KS08_RS17340 PF02645 Uncharacterised protein, DegV family COG1307 KS08_RS17345 PF00072 Response regulator receiver domain KS08_RS17345 PF00196 Bacterial regulatory proteins, luxR family KS08_RS17350 PF05384 Sensor protein DegS KS08_RS17350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS17350 PF07730 Histidine kinase KS08_RS17355 PF09186 Domain of unknown function (DUF1949) KS08_RS17355 PF01205 Uncharacterized protein family UPF0029 KS08_RS17360 PF03816 Cell envelope-related transcriptional attenuator domain KS08_RS17365 PF00953 Glycosyl transferase family 4 KS08_RS17375 PF00535 Glycosyl transferase family 2 KS08_RS17380 PF02706 Chain length determinant protein KS08_RS17385 PF04932 O-Antigen ligase KS08_RS17390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KS08_RS17390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KS08_RS17390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KS08_RS17395 PF13439 Glycosyltransferase Family 4 KS08_RS17395 PF00534 Glycosyl transferases group 1 KS08_RS17400 PF01943 Polysaccharide biosynthesis protein KS08_RS17400 PF14667 Polysaccharide biosynthesis C-terminal domain KS08_RS17405 PF02397 Bacterial sugar transferase KS08_RS17410 PF04122 Putative cell wall binding repeat 2 KS08_RS17410 PF01520 N-acetylmuramoyl-L-alanine amidase KS08_RS17415 PF04122 Putative cell wall binding repeat 2 KS08_RS17415 PF08486 Stage II sporulation protein KS08_RS17425 PF03816 Cell envelope-related transcriptional attenuator domain KS08_RS17430 PF02350 UDP-N-acetylglucosamine 2-epimerase KS08_RS17435 PF00483 Nucleotidyl transferase KS08_RS17440 PF00005 ABC transporter KS08_RS17445 PF01061 ABC-2 type transporter KS08_RS17450 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KS08_RS17455 PF09318 Glycosyl transferase 1 domain A KS08_RS17455 PF00534 Glycosyl transferases group 1 KS08_RS17460 PF01467 Cytidylyltransferase-like KS08_RS17465 PF03808 Glycosyl transferase WecB/TagA/CpsF family KS08_RS17470 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KS08_RS17475 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KS08_RS17475 PF05036 Sporulation related domain KS08_RS17475 PF08239 Bacterial SH3 domain KS08_RS17480 PF01238 Phosphomannose isomerase type I KS08_RS17485 PF03323 Bacillus/Clostridium GerA spore germination protein KS08_RS17490 PF03845 Spore germination protein KS08_RS17495 PF05504 Spore germination B3/ GerAC like, C-terminal KS08_RS17500 PF00535 Glycosyl transferase family 2 KS08_RS17505 PF00083 Sugar (and other) transporter KS08_RS17510 PF03816 Cell envelope-related transcriptional attenuator domain KS08_RS17520 PF04791 LMBR1-like membrane protein KS08_RS17525 PF00877 NlpC/P60 family KS08_RS17530 PF09587 Bacterial capsule synthesis protein PGA_cap KS08_RS17535 PF14102 Capsule biosynthesis CapC KS08_RS17540 PF08245 Mur ligase middle domain KS08_RS17545 PF03323 Bacillus/Clostridium GerA spore germination protein KS08_RS17550 PF03845 Spore germination protein KS08_RS17560 PF00356 Bacterial regulatory proteins, lacI family KS08_RS17565 PF00294 pfkB family carbohydrate kinase KS08_RS17570 PF05025 RbsD / FucU transport protein family KS08_RS17575 PF00005 ABC transporter KS08_RS17580 PF02653 Branched-chain amino acid transport system / permease component KS08_RS17585 PF13407 Periplasmic binding protein domain KS08_RS17590 PF08239 Bacterial SH3 domain KS08_RS17595 PF02525 Flavodoxin-like fold KS08_RS17600 PF03306 Alpha-acetolactate decarboxylase KS08_RS17605 PF00205 Thiamine pyrophosphate enzyme, central domain KS08_RS17605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KS08_RS17605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KS08_RS17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS17610 PF03466 LysR substrate binding domain KS08_RS17615 PF02040 Arsenical pump membrane protein KS08_RS17630 PF08757 CotH kinase protein KS08_RS17640 PF01613 Flavin reductase like domain KS08_RS17655 PF13404 AsnC-type helix-turn-helix domain KS08_RS17655 PF01037 Lrp/AsnC ligand binding domain KS08_RS17660 PF02417 Chromate transporter KS08_RS17665 PF02417 Chromate transporter KS08_RS17695 PF14431 YwqJ-like deaminase KS08_RS17695 PF14449 Pre-toxin TG KS08_RS17695 PF04740 LXG domain of WXG superfamily KS08_RS17705 PF16888 Domain of unknown function (DUF5082) KS08_RS17710 PF09234 Domain of unknown function (DUF1963) KS08_RS17715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KS08_RS17715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KS08_RS17715 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KS08_RS17725 PF13614 AAA domain KS08_RS17730 PF13807 G-rich domain on putative tyrosine kinase KS08_RS17730 PF02706 Chain length determinant protein KS08_RS17740 PF04434 SWIM zinc finger KS08_RS17745 PF00271 Helicase conserved C-terminal domain KS08_RS17745 PF12419 SNF2 Helicase protein KS08_RS17745 PF00176 SNF2 family N-terminal domain KS08_RS17755 PF08220 DeoR-like helix-turn-helix domain KS08_RS17755 PF00455 DeoR C terminal sensor domain KS08_RS17760 PF00436 Single-strand binding protein family KS08_RS17770 PF14183 YwpF-like protein KS08_RS17775 PF01741 Large-conductance mechanosensitive channel, MscL KS08_RS17780 PF07977 FabA-like domain KS08_RS17785 PF18801 response regulator aspartate phosphatase H, N terminal KS08_RS17790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KS08_RS17790 PF00460 Flagella basal body rod protein KS08_RS17795 PF00460 Flagella basal body rod protein KS08_RS17795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KS08_RS17805 PF12116 Stage III sporulation protein D KS08_RS17810 PF01047 MarR family KS08_RS17815 PF07690 Major Facilitator Superfamily KS08_RS17820 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KS08_RS17830 PF00857 Isochorismatase family KS08_RS17835 PF00909 Ammonium Transporter Family KS08_RS17840 PF00543 Nitrogen regulatory protein P-II KS08_RS17845 PF01098 Cell cycle protein KS08_RS17850 PF01569 PAP2 superfamily KS08_RS17855 PF04892 VanZ like family KS08_RS17860 PF01551 Peptidase family M23 KS08_RS17865 PF00583 Acetyltransferase (GNAT) family KS08_RS17870 PF17319 Family of unknown function (DUF5362) KS08_RS17875 PF17370 Family of unknown function (DUF5392) KS08_RS17880 PF13396 Phospholipase_D-nuclease N-terminal KS08_RS17880 PF13091 PLD-like domain KS08_RS17890 PF17319 Family of unknown function (DUF5362) KS08_RS17895 PF13460 NAD(P)H-binding KS08_RS17900 PF02082 Transcriptional regulator KS08_RS17905 PF01979 Amidohydrolase family KS08_RS17905 PF00449 Urease alpha-subunit, N-terminal domain KS08_RS17910 PF00699 Urease beta subunit KS08_RS17915 PF00547 Urease, gamma subunit KS08_RS17920 PF05532 CsbD-like KS08_RS17930 PF17874 MalT-like TPR region KS08_RS17930 PF18801 response regulator aspartate phosphatase H, N terminal KS08_RS17935 PF06463 Molybdenum Cofactor Synthesis C KS08_RS17935 PF04055 Radical SAM superfamily KS08_RS17940 PF02634 FdhD/NarQ family KS08_RS17945 PF00092 von Willebrand factor type A domain KS08_RS17950 PF00092 von Willebrand factor type A domain KS08_RS17955 PF08486 Stage II sporulation protein KS08_RS17960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KS08_RS17965 PF08680 TATA-box binding KS08_RS17970 PF06612 Protein of unknown function (DUF1146) KS08_RS17980 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KS08_RS17980 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KS08_RS17985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KS08_RS17985 PF02874 ATP synthase alpha/beta family, beta-barrel domain KS08_RS17990 PF00231 ATP synthase KS08_RS17995 PF00306 ATP synthase alpha/beta chain, C terminal domain KS08_RS17995 PF02874 ATP synthase alpha/beta family, beta-barrel domain KS08_RS17995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KS08_RS18000 PF00213 ATP synthase delta (OSCP) subunit KS08_RS18005 PF00430 ATP synthase B/B' CF(0) KS08_RS18010 PF00137 ATP synthase subunit C KS08_RS18015 PF00119 ATP synthase A chain KS08_RS18020 PF03899 ATP synthase I chain KS08_RS18030 PF00464 Serine hydroxymethyltransferase KS08_RS18035 PF04260 Protein of unknown function (DUF436) KS08_RS18040 PF02502 Ribose/Galactose Isomerase KS08_RS18045 PF01451 Low molecular weight phosphotyrosine protein phosphatase KS08_RS18050 PF02659 Putative manganese efflux pump KS08_RS18055 PF03481 Putative GTP-binding controlling metal-binding KS08_RS18055 PF01300 Telomere recombination KS08_RS18065 PF09551 Stage II sporulation protein R (spore_II_R) KS08_RS18070 PF17094 Uncharacterised protein family (UPF0715) KS08_RS18075 PF17247 Family of unknown function (DUF5316) KS08_RS18080 PF17827 PrmC N-terminal domain KS08_RS18080 PF05175 Methyltransferase small domain KS08_RS18085 PF00472 RF-1 domain KS08_RS18085 PF03462 PCRF domain KS08_RS18090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS18095 PF13411 MerR HTH family regulatory protein KS08_RS18100 PF03547 Membrane transport protein KS08_RS18105 PF00390 Malic enzyme, N-terminal domain KS08_RS18105 PF03949 Malic enzyme, NAD binding domain KS08_RS18110 PF00265 Thymidine kinase KS08_RS18115 PF01197 Ribosomal protein L31 KS08_RS18120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KS08_RS18120 PF07498 Rho termination factor, N-terminal domain KS08_RS18120 PF07497 Rho termination factor, RNA-binding domain KS08_RS18125 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KS08_RS18130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KS08_RS18135 PF00923 Transaldolase/Fructose-6-phosphate aldolase KS08_RS18140 PF01116 Fructose-bisphosphate aldolase class-II KS08_RS18145 PF00072 Response regulator receiver domain KS08_RS18150 PF10740 Domain of unknown function (DUF2529) KS08_RS18155 PF06418 CTP synthase N-terminus KS08_RS18155 PF00117 Glutamine amidotransferase class-I KS08_RS18160 PF05066 HB1, ASXL, restriction endonuclease HTH domain KS08_RS18165 PF13183 4Fe-4S dicluster domain KS08_RS18165 PF02754 Cysteine-rich domain KS08_RS18170 PF13091 PLD-like domain KS08_RS18175 PF03851 UV-endonuclease UvdE KS08_RS18185 PF00005 ABC transporter KS08_RS18185 PF00664 ABC transporter transmembrane region KS08_RS18190 PF13396 Phospholipase_D-nuclease N-terminal KS08_RS18190 PF13091 PLD-like domain KS08_RS18195 PF02665 Nitrate reductase gamma subunit KS08_RS18200 PF02613 Nitrate reductase delta subunit KS08_RS18205 PF13247 4Fe-4S dicluster domain KS08_RS18205 PF14711 Respiratory nitrate reductase beta C-terminal KS08_RS18210 PF14710 Respiratory nitrate reductase alpha N-terminal KS08_RS18210 PF00384 Molybdopterin oxidoreductase KS08_RS18210 PF01568 Molydopterin dinucleotide binding domain KS08_RS18220 PF14256 YwiC-like protein KS08_RS18225 PF00325 Bacterial regulatory proteins, crp family KS08_RS18225 PF00027 Cyclic nucleotide-binding domain KS08_RS18230 PF07690 Major Facilitator Superfamily KS08_RS18235 PF00750 tRNA synthetases class I (R) KS08_RS18235 PF05746 DALR anticodon binding domain KS08_RS18235 PF03485 Arginyl tRNA synthetase N terminal domain KS08_RS18240 PF09148 Domain of unknown function (DUF1934) KS08_RS18255 PF18801 response regulator aspartate phosphatase H, N terminal KS08_RS18260 PF11131 Rap-phr extracellular signalling KS08_RS18265 PF00491 Arginase family KS08_RS18270 PF17284 Spermidine synthase tetramerisation domain KS08_RS18275 PF00912 Transglycosylase KS08_RS18275 PF00905 Penicillin binding protein transpeptidase domain KS08_RS18285 PF08741 YwhD family KS08_RS18290 PF02163 Peptidase family M50 KS08_RS18295 PF01361 Tautomerase enzyme KS08_RS18300 PF01047 MarR family KS08_RS18305 PF13520 Amino acid permease KS08_RS18315 PF01966 HD domain KS08_RS18320 PF07293 Protein of unknown function (DUF1450) KS08_RS18330 PF03551 Transcriptional regulator PadR-like family KS08_RS18345 PF12679 ABC-2 family transporter protein KS08_RS18370 PF03099 Biotin/lipoate A/B protein ligase family KS08_RS18375 PF03466 LysR substrate binding domain KS08_RS18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS18380 PF03601 Conserved hypothetical protein 698 KS08_RS18385 PF01515 Phosphate acetyl/butaryl transferase KS08_RS18390 PF06778 Chlorite dismutase KS08_RS18400 PF00155 Aminotransferase class I and II KS08_RS18405 PF07690 Major Facilitator Superfamily KS08_RS18420 PF07883 Cupin domain KS08_RS18430 PF07690 Major Facilitator Superfamily KS08_RS18435 PF07690 Major Facilitator Superfamily KS08_RS18440 PF00324 Amino acid permease KS08_RS18445 PF01546 Peptidase family M20/M25/M40 KS08_RS18450 PF00171 Aldehyde dehydrogenase family KS08_RS18455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KS08_RS18455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KS08_RS18460 PF17735 Biofilm surface layer A KS08_RS18465 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KS08_RS18470 PF04321 RmlD substrate binding domain KS08_RS18475 PF16363 GDP-mannose 4,6 dehydratase KS08_RS18480 PF00483 Nucleotidyl transferase KS08_RS18485 PF04101 Glycosyltransferase family 28 C-terminal domain KS08_RS18490 PF02348 Cytidylyltransferase KS08_RS18495 PF03102 NeuB family KS08_RS18495 PF08666 SAF domain KS08_RS18500 PF00583 Acetyltransferase (GNAT) family KS08_RS18505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KS08_RS18510 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KS08_RS18515 PF00535 Glycosyl transferase family 2 KS08_RS18520 PF09671 Spore coat protein (Spore_GerQ) KS08_RS18525 PF04241 Protein of unknown function (DUF423) KS08_RS18530 PF00860 Permease family KS08_RS18535 PF17261 Family of unknown function (DUF5327) KS08_RS18540 PF03167 Uracil DNA glycosylase superfamily KS08_RS18545 PF00535 Glycosyl transferase family 2 KS08_RS18555 PF08543 Phosphomethylpyrimidine kinase KS08_RS18565 PF00251 Glycosyl hydrolases family 32 N-terminal domain KS08_RS18565 PF08244 Glycosyl hydrolases family 32 C terminal KS08_RS18570 PF00367 phosphotransferase system, EIIB KS08_RS18570 PF02378 Phosphotransferase system, EIIC KS08_RS18575 PF03123 CAT RNA binding domain KS08_RS18575 PF00874 PRD domain KS08_RS18585 PF00082 Subtilase family KS08_RS18585 PF13860 FlgD Ig-like domain KS08_RS18585 PF05922 Peptidase inhibitor I9 KS08_RS18585 PF02225 PA domain KS08_RS18590 PF00296 Luciferase-like monooxygenase KS08_RS18595 PF13280 WYL domain KS08_RS18595 PF08279 HTH domain KS08_RS18615 PF00881 Nitroreductase family KS08_RS18620 PF01098 Cell cycle protein KS08_RS18625 PF00583 Acetyltransferase (GNAT) family KS08_RS18630 PF17368 Spore morphogenesis and germination YwcE KS08_RS18635 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KS08_RS18640 PF00510 Cytochrome c oxidase subunit III KS08_RS18645 PF00115 Cytochrome C and Quinol oxidase polypeptide I KS08_RS18650 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KS08_RS18650 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KS08_RS18655 PF04226 Transglycosylase associated protein KS08_RS18660 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KS08_RS18660 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KS08_RS18665 PF08544 GHMP kinases C terminal KS08_RS18665 PF00288 GHMP kinases N terminal domain KS08_RS18665 PF10509 Galactokinase galactose-binding signature KS08_RS18670 PF04138 GtrA-like protein KS08_RS18675 PF00440 Bacterial regulatory proteins, tetR family KS08_RS18680 PF08671 Anti-repressor SinI KS08_RS18695 PF01323 DSBA-like thioredoxin domain KS08_RS18700 PF10518 TAT (twin-arginine translocation) pathway signal sequence KS08_RS18700 PF04261 Dyp-type peroxidase family KS08_RS18705 PF09375 Imelysin KS08_RS18710 PF03239 Iron permease FTR1 family KS08_RS18715 PF02581 Thiamine monophosphate synthase KS08_RS18720 PF02110 Hydroxyethylthiazole kinase family KS08_RS18725 PF03466 LysR substrate binding domain KS08_RS18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS08_RS18730 PF03788 LrgA family KS08_RS18735 PF04172 LrgB-like family KS08_RS18740 PF09962 Uncharacterized conserved protein (DUF2196) KS08_RS18745 PF07739 TipAS antibiotic-recognition domain KS08_RS18745 PF13411 MerR HTH family regulatory protein KS08_RS18750 PF10026 Predicted Zn-dependent protease (DUF2268) KS08_RS18755 PF17785 PUA-like domain KS08_RS18755 PF10672 S-adenosylmethionine-dependent methyltransferase KS08_RS18760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS18765 PF02378 Phosphotransferase system, EIIC KS08_RS18770 PF00082 Subtilase family KS08_RS18775 PF01501 Glycosyl transferase family 8 KS08_RS18780 PF04607 Region found in RelA / SpoT proteins KS08_RS18785 PF01040 UbiA prenyltransferase family KS08_RS18800 PF00544 Pectate lyase KS08_RS18805 PF00892 EamA-like transporter family KS08_RS18810 PF00582 Universal stress protein family KS08_RS18815 PF00232 Glycosyl hydrolase family 1 KS08_RS18820 PF02378 Phosphotransferase system, EIIC KS08_RS18820 PF00367 phosphotransferase system, EIIB KS08_RS18820 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KS08_RS18830 PF00145 C-5 cytosine-specific DNA methylase KS08_RS18835 PF01119 DNA mismatch repair protein, C-terminal domain KS08_RS18835 PF08676 MutL C terminal dimerisation domain KS08_RS18860 PF04616 Glycosyl hydrolases family 43 KS08_RS18860 PF16369 C-terminal lipocalin-like domain KS08_RS18865 PF09021 HutP KS08_RS18870 PF00221 Aromatic amino acid lyase KS08_RS18875 PF17392 Urocanase C-terminal domain KS08_RS18875 PF01175 Urocanase Rossmann-like domain KS08_RS18875 PF17391 Urocanase N-terminal domain KS08_RS18880 PF01979 Amidohydrolase family KS08_RS18885 PF00491 Arginase family KS08_RS18890 PF00324 Amino acid permease KS08_RS18895 PF02885 Glycosyl transferase family, helical bundle domain KS08_RS18895 PF00591 Glycosyl transferase family, a/b domain KS08_RS18895 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KS08_RS18900 PF01773 Na+ dependent nucleoside transporter N-terminus KS08_RS18900 PF07662 Na+ dependent nucleoside transporter C-terminus KS08_RS18905 PF01791 DeoC/LacD family aldolase KS08_RS18925 PF11631 Protein of unknown function (DUF3255) KS08_RS18945 PF01497 Periplasmic binding protein KS08_RS18950 PF06486 Protein of unknown function (DUF1093) KS08_RS18955 PF02687 FtsX-like permease family KS08_RS18960 PF00005 ABC transporter KS08_RS18965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS18970 PF00486 Transcriptional regulatory protein, C terminal KS08_RS18970 PF00072 Response regulator receiver domain KS08_RS18975 PF01116 Fructose-bisphosphate aldolase class-II KS08_RS18980 PF01261 Xylose isomerase-like TIM barrel KS08_RS18985 PF01261 Xylose isomerase-like TIM barrel KS08_RS18990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS08_RS18990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS08_RS18995 PF07690 Major Facilitator Superfamily KS08_RS19000 PF01261 Xylose isomerase-like TIM barrel KS08_RS19005 PF00205 Thiamine pyrophosphate enzyme, central domain KS08_RS19005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KS08_RS19005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KS08_RS19010 PF00294 pfkB family carbohydrate kinase KS08_RS19015 PF04962 KduI/IolB family KS08_RS19020 PF00171 Aldehyde dehydrogenase family KS08_RS19025 PF00455 DeoR C terminal sensor domain KS08_RS19025 PF08220 DeoR-like helix-turn-helix domain KS08_RS19030 PF00248 Aldo/keto reductase family KS08_RS19035 PF00083 Sugar (and other) transporter KS08_RS19040 PF00183 Hsp90 protein KS08_RS19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS19050 PF00072 Response regulator receiver domain KS08_RS19050 PF00196 Bacterial regulatory proteins, luxR family KS08_RS19055 PF07730 Histidine kinase KS08_RS19060 PF00487 Fatty acid desaturase KS08_RS19065 PF00440 Bacterial regulatory proteins, tetR family KS08_RS19070 PF00171 Aldehyde dehydrogenase family KS08_RS19075 PF13570 PQQ-like domain KS08_RS19075 PF01011 PQQ enzyme repeat KS08_RS19075 PF13360 PQQ-like domain KS08_RS19090 PF07690 Major Facilitator Superfamily KS08_RS19095 PF06271 RDD family KS08_RS19105 PF00578 AhpC/TSA family KS08_RS19110 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS08_RS19110 PF13192 Thioredoxin domain KS08_RS19120 PF00324 Amino acid permease KS08_RS19145 PF06874 Firmicute fructose-1,6-bisphosphatase KS08_RS19150 PF01799 [2Fe-2S] binding domain KS08_RS19150 PF00111 2Fe-2S iron-sulfur cluster binding domain KS08_RS19160 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KS08_RS19160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KS08_RS19165 PF12804 MobA-like NTP transferase domain KS08_RS19170 PF13478 XdhC Rossmann domain KS08_RS19170 PF02625 XdhC and CoxI family KS08_RS19200 PF02590 Predicted SPOUT methyltransferase KS08_RS19220 PF00248 Aldo/keto reductase family KS08_RS19225 PF00583 Acetyltransferase (GNAT) family KS08_RS19230 PF18801 response regulator aspartate phosphatase H, N terminal KS08_RS19235 PF00491 Arginase family KS08_RS19240 PF00324 Amino acid permease KS08_RS19245 PF00202 Aminotransferase class-III KS08_RS19250 PF13630 SdpI/YhfL protein family KS08_RS19250 PF07853 Protein of unknown function (DUF1648) KS08_RS19255 PF01022 Bacterial regulatory protein, arsR family KS08_RS19260 PF00158 Sigma-54 interaction domain KS08_RS19260 PF02954 Bacterial regulatory protein, Fis family KS08_RS19260 PF13426 PAS domain KS08_RS19275 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS19275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS19275 PF00672 HAMP domain KS08_RS19280 PF00072 Response regulator receiver domain KS08_RS19280 PF00486 Transcriptional regulatory protein, C terminal KS08_RS19290 PF13180 PDZ domain KS08_RS19295 PF00753 Metallo-beta-lactamase superfamily KS08_RS19300 PF09648 YycH protein KS08_RS19305 PF07435 YycH protein KS08_RS19310 PF00672 HAMP domain KS08_RS19310 PF13426 PAS domain KS08_RS19310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS08_RS19310 PF00512 His Kinase A (phospho-acceptor) domain KS08_RS19315 PF00486 Transcriptional regulatory protein, C terminal KS08_RS19315 PF00072 Response regulator receiver domain KS08_RS19345 PF00709 Adenylosuccinate synthetase KS08_RS19350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS19355 PF03796 DnaB-like helicase C terminal domain KS08_RS19355 PF00772 DnaB-like helicase N terminal domain KS08_RS19360 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KS08_RS19385 PF13477 Glycosyl transferase 4-like KS08_RS19385 PF00534 Glycosyl transferases group 1 KS08_RS19400 PF01281 Ribosomal protein L9, N-terminal domain KS08_RS19400 PF03948 Ribosomal protein L9, C-terminal domain KS08_RS19405 PF01368 DHH family KS08_RS19405 PF02272 DHHA1 domain KS08_RS19410 PF09991 Predicted membrane protein (DUF2232) KS08_RS19420 PF07875 Coat F domain KS08_RS19425 PF01638 HxlR-like helix-turn-helix KS08_RS19430 PF01368 DHH family KS08_RS19430 PF02833 DHHA2 domain KS08_RS19435 PF00892 EamA-like transporter family KS08_RS19440 PF02435 Levansucrase/Invertase KS08_RS19445 PF00251 Glycosyl hydrolases family 32 N-terminal domain KS08_RS19445 PF08244 Glycosyl hydrolases family 32 C terminal KS08_RS19450 PF07729 FCD domain KS08_RS19450 PF00392 Bacterial regulatory proteins, gntR family KS08_RS19455 PF05163 DinB family KS08_RS19460 PF07690 Major Facilitator Superfamily KS08_RS19470 PF00881 Nitroreductase family KS08_RS19475 PF01047 MarR family KS08_RS19480 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS08_RS19480 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS08_RS19485 PF01047 MarR family KS08_RS19490 PF13673 Acetyltransferase (GNAT) domain KS08_RS19500 PF00155 Aminotransferase class I and II KS08_RS19500 PF00392 Bacterial regulatory proteins, gntR family KS08_RS19505 PF00892 EamA-like transporter family KS08_RS19510 PF03190 Protein of unknown function, DUF255 KS08_RS19515 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KS08_RS19520 PF03190 Protein of unknown function, DUF255 KS08_RS19525 PF02517 CPBP intramembrane metalloprotease KS08_RS19530 PF00083 Sugar (and other) transporter KS08_RS19535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS08_RS19540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KS08_RS19540 PF00356 Bacterial regulatory proteins, lacI family KS08_RS19545 PF03372 Endonuclease/Exonuclease/phosphatase family KS08_RS19550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KS08_RS19550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KS08_RS19555 PF02805 Metal binding domain of Ada KS08_RS19555 PF12833 Helix-turn-helix domain KS08_RS19560 PF01084 Ribosomal protein S18 KS08_RS19565 PF00436 Single-strand binding protein family KS08_RS19570 PF01250 Ribosomal protein S6 KS08_RS19575 PF01926 50S ribosome-binding GTPase KS08_RS19575 PF06071 Protein of unknown function (DUF933) KS08_RS19580 PF00384 Molybdopterin oxidoreductase KS08_RS19580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KS08_RS19580 PF01568 Molydopterin dinucleotide binding domain KS08_RS19585 PF06107 Bacterial protein of unknown function (DUF951) KS08_RS19600 PF06866 Protein of unknown function (DUF1256) KS08_RS19605 PF17762 HTH domain found in ParB protein KS08_RS19605 PF02195 ParB-like nuclease domain KS08_RS19610 PF13614 AAA domain KS08_RS19615 PF17762 HTH domain found in ParB protein KS08_RS19615 PF02195 ParB-like nuclease domain KS08_RS19620 PF02527 rRNA small subunit methyltransferase G KS08_RS19625 PF13932 GidA associated domain KS08_RS19625 PF01134 Glucose inhibited division protein A KS08_RS19630 PF12631 MnmE helical domain KS08_RS19630 PF10396 GTP-binding protein TrmE N-terminus KS08_RS19630 PF01926 50S ribosome-binding GTPase KS08_RS19635 PF14804 Jag N-terminus KS08_RS19635 PF01424 R3H domain KS08_RS19640 PF02096 60Kd inner membrane protein KS08_RS19645 PF00825 Ribonuclease P KS08_RS19655 PF18106 Rolling Circle replication initiation protein N-terminal domain KS08_RS19655 PF02486 Replication initiation factor KS08_RS19675 PF00580 UvrD/REP helicase N-terminal domain KS08_RS19675 PF13361 UvrD-like helicase C-terminal domain