        rlbA NONE
        recF NONE
        remB NONE
        gyrB    6696 ..    6721 + -10.6  -5.24129   CATCTAATATAAAAA         GCCTTATTTC CAATAA GAAATAAGGC          TTTTTTCTGAACAAG 100 34
        gyrA    9369 ..    9389 + -16.9  -5.38047   GAAGTGTGAGGAAAA            GCGCAGCTG AAA CAGCTGCGC            TTTTTTATGTACATA 100 32
HC662_RS00045   11331 ..   11343 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 95
HC662_RS00050 NONE
HC662_RS00055   11583 ..   11593 +  -5.4  -4.42235   TAGTAAGACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  69 85
HC662_RS00060   14644 ..   14662 +    -6  -4.49556   GTGAGAAACGCCCAG             TACCTTCA TCC TGAAGGCA             TTTGTTTGGTGGCGA  72 133
         rrf   14792 ..   14810 + -14.6  -6.02919   CCAAGCAAGGTAAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTTGTTTGTCA 100 35
HC662_RS00080   18819 ..   18852 +  -9.7  -2.57468   CTGGTTTTAATCAAT     TGAAAGAGCTCTGAT GTAT GTTAGGGCTCTTTCG      CTTAATATACTGAAA  74 31
        pdxS NONE
        pdxT   20754 ..   20785 + -15.2  -5.45802   AGGGTGGCAACGCGA      GAGCTCTCGTCCCT TTAT GGGGATGAGGGCTC       TTTTTATTTTCGACA 100 274
        serS   22114 ..   22135 +  -6.5  -4.72846   ATAAAATTGTGAAAA           GGTGTGCCT GACC AGGTGCGCC            TTTTTACCTGTGTAG  79 37
HC662_RS00100   22381 ..   22403 +  -8.4  -5.22006   TTGGAGATTGTTTTG           TCCGTTGCGT TCG GTGCAGCGGA           TTTTTATTATAATGA 100 76
HC662_RS00125 NONE
         ffs   26654 ..   26673 + -10.8  -5.60689   CATCAAATTTTCAGA            CTCACCTA TCAT TAGGTGAG             TTTTTTGTTATGTAA 100 50
        dnaX NONE
HC662_RS00140 NONE
        recR NONE
HC662_RS00150 NONE
        bofA   30044 ..   30062 +  -3.2  -3.63837   GTCGCTGATGACGAA             TTACTTTT TTG AAAAGAAA             TTATTAAAAAGTTGT  51 90
HC662_RS00160   31911 ..   31923 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 95
HC662_RS00165 NONE
HC662_RS00170   32163 ..   32173 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  69 85
HC662_RS00175   35148 ..   35165 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  83 58
         rrf   35295 ..   35313 + -14.6  -5.47431   CCAAGCAAGGTAAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTGTATTCA 100 35
        csfB   35658 ..   35671 +  -6.7  -5.57729   GCCATTATATTCTTA               GACCT GAAA AGGTC                TTTTTTGTATTCTTT  90 25
HC662_RS00190 NONE
HC662_RS00195 NONE
HC662_RS00200 NONE
HC662_RS00205   39719 ..   39733 +  -2.9  -3.38218   GTTATCAATGAAGCG               TTGAA AAAAA TTCAA               TTGTGACCTGTTTCC  47 5
        darA   40121 ..   40137 +  -3.7  -4.17089   TATTTGTCCTTCCAG              TCGATGA ATT TCATCAA              TTTTAAGGATTTGAA  59 3
HC662_RS00215 NONE
        holB NONE
        ricT NONE
        yabA   42808 ..   42830 +  -8.4  -4.58663   AAAAAATAAGGAAAA           GGCTTCCG CATAAGA CGGGAGCC           TTTTTCAAAGGTACT  86 32
HC662_RS00235 NONE
HC662_RS00240 NONE
        rsmI   44748 ..   44771 +  -9.7  -5.24129   TCAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTAAAAGAA 100 31
        metG   47578 ..   47619 + -10.3  -3.34398   TTAAATAATGACAAA CAAAAGGTGTTTCACGTGT AACA ATTCGTCGAACACCTTTTG  TGTTTCGACAAGAAA  79 33
HC662_RS00260   48501 ..   48524 +  -2.4  -3.35526   TTCTTCTCCTCATAT          GATAGGTTTG TCGA CAAGTCTTTC           TTCCGTTTCTCATTG  45 110
HC662_RS00265   49902 ..   49922 +    -9  -5.68023   ATATACTTATGTATT            CAGAGGGT TTTGC GCCCTCTG            TTTTTTTCGTTATAA 100 42
        rnmV NONE
        rsmA   51450 ..   51467 +  -9.9  -5.45802   AACGGATTGTATAAA             GCCCTTT TCTA AAAGGGC              TTTTTGTTTTGCGCA 100 14
        prtG   52505 ..   52527 +  -6.3  -5.80951   ATTAACAGATGAAAA           CCCGCAT CAAAGATCT ATGCGGG           TTTTTTATTTTACAT 100 36
HC662_RS00285   52969 ..   52991 +  -8.5  -5.46706   GTAGCATTTTAACGG           GCAGTGAAC CTTTT GTTTACTGC           TTTTTGTTTTGCCCT 100 29
HC662_RS00290   53320 ..   53342 +   -17  -5.48063   CGATAAGGATGTGAC           CCGGGGGACG TGC CGTTCCCCGG           TTTTTTGTGTTGGAT 100 35
HC662_RS00295 NONE
        purR NONE
HC662_RS00305   55623 ..   55648 + -10.5  -5.67283   AAAATAATAAGAAAA         GTGATTCTGGG TGAG CTCGGAATCAC          TTTTTTATTTACCTT 100 34
       spoVG   56121 ..   56162 +  -7.5  -5.33848   ATAACCAAAAAACAA GGACTGCTG--AAAGGGCT GACAAA AGCCTTTTGCCGGCAGTCC TTTTTTAATTCTGAT 100 44
        glmU NONE
HC662_RS00320 NONE
HC662_RS00325   59351 ..   59375 +  -7.9  -4.46926   ACAATAATAGCTTAA          GGCGTAACC CTCCCGA GGTTACGTC          TTTTGTGCTAGAATG  80 34
HC662_RS00330 NONE
         fin   60308 ..   60336 +  -8.9   -5.1523   ATTTATTCAATAAAA        AGCTTTGGTGTAG ACA CTAGACCAAAGCG        TTTTTCTGTTCTCAC  91 28
         mfd   63926 ..   63936 +    -4  -3.92592   TTTGTTACTCTCTGG                 TGTA TAT TACA                 TTTGATGTTACGGAT  57 43
       spoVT   64616 ..   64641 +  -9.1  -5.53991   AAATAGGTATGAAAA         GAACAGC-TCTC CAC GGGATGCTGTTC         TTTTTTTCATGCATG 100 60
HC662_RS00350 NONE
        mazG NONE
HC662_RS00360 NONE
        yabP NONE
        yabQ NONE
       divIC   69505 ..   69522 +  -3.5  -2.90075   GTAGCCTTGTTGACA             CTTAAAT TTTT ATTTAGG              TATAATTAAGCAAAC  45 37
HC662_RS00380   69987 ..   70010 +  -8.9  -6.41881   CTATAAATAAATGAA          GCATCCGTT CATCCC GACGGATGC           TTTTTTTTTGTTATC 100 52
HC662_RS00385 NONE
HC662_RS00390   70299 ..   70321 + -10.7  -5.85011   GGTCATCCTAAAAAA           TCGGTTTCT CTTGC AGAAACCGA           TTTTTTTCATTTTTA 100 33
      spoIIE   73017 ..   73031 +  -4.2  -2.80074   GAAGATGGGAATATA               GGAATC TGA GAATCC               TCGTATTCTCCAGGA  48 71
HC662_RS00400 NONE
        prkT   74834 ..   74845 +    -3  -3.61356   GATTGAAAGTGATAG                GATA TGAA TATC                 TTTAAAATACCTGCT  49 84
        tilS NONE
         hpt NONE
        ftsH   78867 ..   78886 + -11.4  -5.72616   CTTTCTATCTAAAAA            CTGCCGGC TGAC GCTGGCAG             TTTTTTTGTGTAAAT 100 45
HC662_RS00425 NONE
        hslO   80694 ..   80714 + -11.9  -5.72207   TTCGTGACCAAACTA            CCCGCTAAG CTC TTTAGCGGG            TTTTTTTAATTTGAG 100 18
HC662_RS00435 NONE
        cysK   82655 ..   82672 + -12.7  -5.82172   GATTAAAAAGCCAAA             CTCCCGG TCCG CCGGGAG              TTTTTTTATATTCGT 100 35
HC662_RS00445 NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
HC662_RS00475 NONE
        dusB   88600 ..   88620 +    -9   -5.1286   TCTATTTGCTGCTCA            CTGCCAGT TTTGC GCTGGCAG            TTTTTCTGCTTTTTC  91 49
        lysS   90174 ..   90207 + -11.1   -4.7629   AACGTTAATAAAGAA     GAGCGGCATCCTTTCA CTA TGAG-GGATGACGCTC     TTTTTAAATTCCTAA  91 33
HC662_RS00490   92093 ..   92118 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC662_RS00495   95158 ..   95175 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  83 54
         rrf   95298 ..   95313 +  -7.6  -3.31322   GACGCCGCCAAGCAA              TTGCAC GCTA GTGCAA               TTATGGAGGATTAGC  67 28
HC662_RS00505 NONE
HC662_RS00510 NONE
HC662_RS00515 NONE
HC662_RS00520   95715 ..   95726 +  -2.2  -3.09516   AACTGGACATCCTGT                CTGC GGAA GTAG                 TTCAGTGGTAGAACA  43 64
HC662_RS00525 NONE
HC662_RS00530   95881 ..   95891 +  -2.4  -3.36823   TGCCGGTTCAAGTCC                 GGCC CTC GGCA                 TTAAGTTTTGCGCCC  45 15
HC662_RS00535 NONE
HC662_RS00540 NONE
HC662_RS00545   96316 ..   96332 +  -2.3   -3.8709   CGCACAGTGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  50 178
HC662_RS00550   97948 ..   97973 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC662_RS00555  101014 ..  101031 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  83 54
         rrf  101163 ..  101184 + -15.9  -5.16133   AAGCAATTGAAAAAA           GGGCAGCTC ATAT GAGCTGCCC            TTTTTGTATTCTGGT 100 37
        ctsR NONE
        mcsA NONE
HC662_RS00575 NONE
HC662_RS00580  105966 ..  105996 +  -9.9  -2.89602   ATATAGAGACGGAAA       TGAGGCATACA ACATGTAAG TGTATGCCTCA       CTTTCATATCAAGAA  75 40
        radA NONE
        disA NONE
HC662_RS00595 NONE
HC662_RS00600 NONE
HC662_RS00605 NONE
HC662_RS00610  112668 ..  112698 + -12.7   -5.8187   AACCGCGCGGTTAAA      GCGTCTCTGTCATG TTTT CATG-CAGAGGCGC       TTTTTTTATTGGGTA 100 249
        cysE NONE
        cysS NONE
HC662_RS00625 NONE
        rlmB NONE
        rae1 NONE
        sigH  117216 ..  117228 +  -2.7  -3.02986   TGTAATAGGGATTTA                TGTTA TAT TGACA                GTATTTTTCTGACTA  43 36
        rpmG NONE
        secE  117707 ..  117719 +  -6.9  -5.56673   TATCACTTGCCAAAA                CCCGT TCA GCGGG                TTTTTTATTGTGGCT  93 73
        nusG  118423 ..  118449 +  -2.3   -2.6197   GATAATATAGCAAAG        GTACGTCTTGGA CTTA TCCAAGGCA-AC         TAGCTTGATATTTCG  40 73
        rplK  118982 ..  119011 + -13.7  -3.72027   AATTTGTTTCTTGTC       GGGTTGCGAGTTT TAAC AAGTTCGCAACCC        TTATTCGTGGGAGGT 100 39
        rplA  119912 ..  119932 + -15.5   -4.9792   ATGCTTGTATATACA            GCCTCCATG TCT CATGGAGGC            TTTTTATATGGAATC 100 176
HC662_RS00670 NONE
        rplL  120953 ..  120973 +  -7.5  -5.29846   TTACCTGTAGGGGAA            GCTCGCTTT TAT GAGGCGGGC            TTTTTCTTTGCCATT 100 48
HC662_RS00680  121762 ..  121782 +    -4   -5.8901   TTTGTTTTTGGATGT            GGTTTTCT TAATT AGAAACCC            TTTTTTCTTTTGTCT  93 161
        rpoB NONE
        rpoC  129122 ..  129161 + -12.3   -4.7254   TGAATAACTGATTTA  AAGCTGCTGAAAGACTG CCAAAA CAGTCTTTCAGCAGATA   TTTTTAATAAAAAAT 100 34
HC662_RS00695  129549 ..  129582 +  -9.1  -4.68528   TTTATAACGTACTTT     TGTTTTTGCGTAAGA TTTA TCTTATGTAAAGACA      TTGTTTTTTGCCTTT  86 34
        rpsL NONE
        rpsG NONE
        fusA  132762 ..  132779 +  -8.5   -3.2918   TTGTAAGATGAGGAA             GTGAAAG CTTT CTTTCAC              TTCCTATCACTCTAT  70 75
         tuf  134038 ..  134058 + -12.6  -5.32565   TCGTATGATGATAAA            CGAGACCC CCTGC GGGTCTCG            TTTTTTGGTTACTTA 100 41
HC662_RS00720  135231 ..  135262 +    -5  -4.82901   GAGGTTGCTGACACA      CCCGGCCGCTTTGC CATG GCAAGGTGTTCAGG       TTTTTCTCACGGAGA  72 175
        rpsJ  135625 ..  135639 +  -2.9  -2.77523   GAAATCAAACTTTAA               TTCTA AAATA TAGAA               TGATCTTAATAGGAG  42 26
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY  145773 ..  145798 + -10.5  -3.14132   ATTTATGAAAAACTA         GAGGAAATGGA TTTA TCCATTCCCTC          TTAATAAAGAGAGGA  78 25
HC662_RS00835 NONE
         map  147239 ..  147250 +  -4.4  -3.92577   GGTGATGAAAATAAT                TCTG AAGA CAGA                 TGTTTTTCCGGCTTG  59 40
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK  148818 ..  148851 +  -5.4  -3.66666   CTAAACAATGGGGAA     TTTCGGATGGAATC TCATAT GATTCTATTCGAGG      TTTCGACGTTTTGAA  59 138
HC662_RS00870  149827 ..  149847 +  -4.7  -2.55002   CGCAAAGACGATTGA            CTAGTTTCC CTT GTGAACTAG            GATTTTCGTGTGTTT  49 26
        rplQ  150247 ..  150260 +  -3.9  -2.85346   ACGGAGCACCAATGG               CAATT ATCG AATTG                GTTTAATCACATATT  45 6
HC662_RS00880 NONE
HC662_RS00885 NONE
HC662_RS00890 NONE
        truA  153686 ..  153696 +    -4  -3.34398   AAAGTTATAAGATAT                 CATA TGG TATG                 TATTTCAACCCCACG  49 77
        rplM NONE
        rpsI  154662 ..  154684 +  -7.7  -5.83211   TTTTACGTTTTCAAA           GCTCTCGAC CCTGT GTTGGGAGC           TTTTTTATTTTCATA 100 41
HC662_RS00910  155915 ..  155938 +  -3.1   -5.1861   GTGAAATTATGAAAA          GCAGCGACCT ATTAG AGGA-GCTGC          TTTTTTAGTAATCGC  75 29
HC662_RS00915 NONE
        cwlD  157304 ..  157323 +  -9.3  -4.39889   CACAGAAAAAGGAGA            CCCTCCT GAGTAA AGGAGGG             TTTTCGTATGGTTCT  86 13
        salA  158474 ..  158506 +  -9.8  -4.31837   GTGCAAGTATAAAAA      GGGCGAACCGGGAT TCTAT ATCCCGGTCTTCCC      TTTATTCACTTTCTT  86 29
HC662_RS00935  160019 ..  160031 +  -2.7  -3.54424   GTAATGAACGACTGT                GTAAT TGT ATTGC                TTTGCGACCGTGAGA  49 273
HC662_RS00945  162503 ..  162528 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC662_RS00950  165568 ..  165585 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  83 54
         rrf  165697 ..  165707 +  -2.4  -5.05116   TGTGAGAGTAGGACG                 CCGC CAA GCAG                 TTTTATTATTTCTAC  69 17
HC662_RS00960  165805 ..  165853 +  -5.1  -3.09516   ATCGGTCGTAGGTTC GAATCCTACCTGCGGAGCCATTG CTT CCATAGCTCAGCAGGTAGAGCAC TTCCATGGTAAGGAA  52 6
HC662_RS00965  165925 ..  165946 +    -3  -5.80364   TATTTATCTTACCAA           GGTTTCTC AAAAAG GAGAAAGC            TTTTTTTATTGCGAT  85 49
HC662_RS00970  166043 ..  166057 +  -8.6  -3.38178   CTTCCGCTCCATTTT               TATCCC AAC GGGATA               TTCTAAAATTGATTG  74 30
HC662_RS00975 NONE
HC662_RS00980 NONE
HC662_RS00985  166487 ..  166503 +  -2.3   -3.8709   CGCACAGTGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  50 178
HC662_RS00990  168119 ..  168144 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC662_RS00995  171184 ..  171201 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  83 54
         rrf  171493 ..  171509 +  -2.3   -3.8709   CGCACAGTGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  50 197
HC662_RS01005  173125 ..  173150 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC662_RS01010  176190 ..  176207 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  83 54
         rrf  176337 ..  176355 + -14.6  -6.14618   CCAAGCAAGGTAAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTTGTTTTATA 100 35
HC662_RS01025 NONE
HC662_RS01030 NONE
HC662_RS01035  181105 ..  181131 + -12.4  -5.08088   GATATAATGCAGTGA         AATGGCTCAAAC TTA GTTTGAGCCATA         TTTTTCTTCAGCATT 100 34
HC662_RS01040  182782 ..  182803 + -14.5  -5.37043   GCATAAAATAGGGAA           GCCCAGTTC AAGA GAACTGGGC            TTTTTTATATAACAT 100 35
HC662_RS01045  183842 ..  183861 +  -9.3   -5.1287   AAAGCATGAAAAAAA            CCGCTCA ATCCTG TGAGCGG             TTTTTTCCGTATAGC  91 32
HC662_RS01115 NONE
HC662_RS01120 NONE
HC662_RS01125 NONE
HC662_RS01130 NONE
HC662_RS01135  198875 ..  198897 + -10.7  -6.20267   GCTAGCCCAGTCACA           GACACCTTT GACCA AAAGGTGTC           TTTTTTTCTTTTTAA 100 28
        sigW NONE
        rsiW  200296 ..  200322 +  -8.8  -5.41143   GATCCAAACGGAAAA         GAGTAAAGCG CGTCAGT CGCTTTGCTC         TTTTTTTACGGGCTG 100 20
        cdaA NONE
        cdaR NONE
HC662_RS01160  204212 ..  204224 +  -3.4  -4.29348   CACATGCTGTAAAAT                CAAG CTTGT CTTG                TTCTTATTTTCTCTG  60 142
        glmS  206340 ..  206367 +  -9.2  -4.11141   GAATAAATTGTTTAA        CCCCTTTGGATA TGAA TGTCTGAAGGGG         TGTTTTTATGTCCAA  82 35
HC662_RS01180  208714 ..  208728 +  -2.8  -2.62316   CAATATCTTGCTATT               CCATTC CCA GAATTG               TACATTCTGAATTTA  41 52
HC662_RS01185 NONE
HC662_RS01190  210018 ..  210043 +  -6.9   -5.7946   TTAATAGAAGGGCTA         CATCCGTTCGT TTAA ATGAACGGATA          TTTTTTTGTTACAGG 100 112
HC662_RS01195 NONE
HC662_RS01200  215098 ..  215109 +    -3  -3.20382   GAATCTAAACATTAT                CAAA TGGA TTTG                 TTACTCAATATAAAA  44 45
HC662_RS01205 NONE
HC662_RS01210 NONE
HC662_RS01215  216481 ..  216519 +  -4.7  -5.42862   TAAATGTTTGTCAAA  GAGGTTGGAAGCTGATTG AACA TAATCAACTTCC-GCTTC   TTTTTTTAGAGCTAT  82 51
HC662_RS01220  217117 ..  217137 +    -7  -4.58395   ACAGAGATATAAAAA            TAAACATC AACAA GATGTTTA            TTTTTACGCCATACA  79 29
HC662_RS01225  218474 ..  218499 +  -9.7    -5.626   TTTCGAAAGATCTAA         CATCCGCTCGT CAAT ACAAGCGGGTG          TTTTTTTATAAGCTG 100 81
HC662_RS01235 NONE
        ybdJ NONE
HC662_RS01245 NONE
HC662_RS01250  222507 ..  222526 +  -7.2  -3.24902   CAAGGCCGAAATCGA            TGA-GGCAG AGC CTGCCGTCA            TTGATGATGATATTA  59 288
HC662_RS01265  225271 ..  225295 + -10.1    -5.252   GGTGTGAATTATTAG          AAAGCTGTTCA TTG TGAACAGCTTA          TTTTTTATGAGAATC 100 26
HC662_RS01270  226989 ..  227008 +  -7.2   -6.4275   TAACCATAAAAAAAA            GAGACATT CACG GATGTCTC             TTTTTTTTATTTTTG 100 38
        csgA NONE
HC662_RS01280  227544 ..  227567 + -11.7  -2.71765   TGAGCATGAGATTTA          GAGCCCTGC CTATTT GCGGGGCTC           CTTCATTTAGGATGT  81 25
HC662_RS01290  229799 ..  229852 + -11.4  -5.55664   CGGCATTAGACGGAA GAGTTAAATCAAAAAAGCTCCCTTC TTTAT GAAGAGAGCTTTTTTG-TTTACTTC TTTTTTTCATCATAG 100 19
HC662_RS01300  232004 ..  232024 + -13.3  -5.61596   GAATAAATGAAAAAA            CCTTGCGCT GTG GGCGCAAGG            TTTTTTTGTGCGGAT 100 35
HC662_RS01305  233844 ..  233867 + -12.6  -5.38321   AATCAATAAGAAAAA          GCTTAGAATC CTAG GATTCTAAGC           TTTTTTGTAGTCTTT 100 32
HC662_RS01320  236738 ..  236760 +  -3.4  -4.04295   CCCCACTTTCTAATA           TATCGTTGAC TAT GGCAACTATA           TTTGATTATAATTGA  57 46
HC662_RS01325 NONE
HC662_RS01330  238985 ..  239017 +  -2.8  -5.34632   GGGATAAAGAGAAGG     AGCATCTCTG-GT TTTGTATT ACTCAGAGATGCC      TTTTTGTATTTTCTT  76 34
        purT  242308 ..  242328 + -15.5  -5.88471   AATAAAATTTGAGCG            GGCCTTGTC TTG GACAAGGCC            TTTTTTTTCATCCTC 100 36
HC662_RS01350 NONE
HC662_RS01355  243738 ..  243768 +  -5.5  -6.02919   AGTTTTCAAAGAATA      GGCGGTTTT-CCTG AGTT CAGGGGAAATTGCC       TTTTTTTATTTATCA 100 25
HC662_RS01360  244939 ..  244967 +  -3.9  -4.19238   TCCTGTAACGCTATT        CGATCCATATCGT CGA ATGATATAGATGG        TTTTACAATTGGAGG  59 168
        pssA NONE
HC662_RS01370 NONE
HC662_RS01375  246795 ..  246821 +  -8.7  -5.40072   TACGAAGAGTAAAAA        GAGGAGCTAGCG TAAA CGC-AGCGCCTC         TTTTTTTGAAGAAAG 100 29
HC662_RS01380  247126 ..  247145 +  -7.2   -5.4833   GAGGATCCAGATAAA            GCTTCTTT CAGT AGAGAAGC             TTTTTTGTTGGCTGA  91 27
HC662_RS01385  248575 ..  248596 + -11.6  -4.70659   TCAAGTGAGCAGTGA           CCCCCTGT GGTACA ACAGGGGG            TTTTTACATATCGCA 100 33
HC662_RS01390  249624 ..  249640 +  -2.1  -3.87869   TTTGTTATTAATAAA              CCCTTGT GCC GCGTGGG              TTTGTAAGAGCTTGG  52 85
HC662_RS01395  250739 ..  250762 + -11.8  -5.60993   GCTGAATAATAGAAA          GAACACCTCG GGAA TGAGGTGTTC           TTTTTTTCTACACGC 100 32
        gamR  255719 ..  255775 +  -5.3  -4.16307   GAACGAAATTCACCG TAGAACAGTCATATCATTCATAAAGCA ATG TGTTTTAAGAAGGGAATGGTGGTTCTA TGTTTTTATTGACGA  65 3
HC662_RS01420  256057 ..  256077 +    -9  -5.67711   GCAATCTAAATCAGA            CAGCCGGA ATGAA TCTGGCTG            TTTTTCTTTTATTTC 100 32
HC662_RS01425  257343 ..  257364 + -14.5  -5.48213   TTTGAAGATGAAAAA           GAACCTGCC CGGA GGCAGGTTC            TTTTTATTTTGAATG 100 36
        glnK NONE
        glnL  264914 ..  264932 + -11.7  -5.88565   GCATGTGAACCAAAA             CAGCCGG CAGTA CCGGCTG             TTTTTTTGTTATGCA 100 33
        kdgD NONE
HC662_RS01465  267561 ..  267591 + -11.3  -3.96148   GTGAAGCCGTAAGGT      GCT-GGAAAGAGGC GGAC GTCTCTTTCCCAGC       TTTATCATAGCCAGC  86 29
        gudP NONE
        gudD  270430 ..  270440 +  -3.2  -3.94773   TTGATTGTAAATATT                 GTCA TAT TGGC                 TATTTTGTCTTACAA  55 43
HC662_RS01480  271195 ..  271222 +  -4.1  -5.40474   ATAATTGTTGAGACA        GCCGCAGTT GAAACGTAAG ATCTGCGGC         TTTTTTTGAACCGAT  79 37
        garD  273000 ..  273020 + -11.1    -5.055   ATATCGTAATAAAAA            GAGGGTGGC AAT GCTGCCCTC            TTTTTTGCGCCTTCA  93 216
        mphK  274297 ..  274322 + -12.6  -5.47431   GGTGGTACCGCGAGA         CCCTCGTCCT TTGCAT AGGACGGGGG          TTTTTTGTGTCTTAA 100 315
HC662_RS01495 NONE
HC662_RS01500  275536 ..  275577 +  -5.3  -5.46698   ATAATTTTTGTAAAA CACACACGTT-TTTCAATTA CAA TAAGTGTAATCACGTGTGTG TTTTTTGATTTTGCA  83 37
        ycbL NONE
HC662_RS01510  277243 ..  277259 +  -3.7  -2.73124   TGACATATTAACAAA              CGTAAGA ATT TCTTAAG              ATTTGAGAAATAAAA  45 30
HC662_RS01515 NONE
HC662_RS01520  278987 ..  279009 + -13.4  -4.02334   CCAATATTCATAAAA           GGCCGATGCT GCC AGCACCGGCC           TTTCTACTATGAATC 100 51
HC662_RS01530 NONE
HC662_RS01535  281273 ..  281293 + -11.9  -5.27335   ATTTTAGAGACAGGA            CGCCGTTCA AAT TGAACGGTG            TTTTTCTTTGAAAAG 100 34
       tatAD  284334 ..  284356 + -13.5  -5.60993   GGGCTGAGTGCTGAT           GAGGCAGAC ACCGG GTCTGCCTC           TTTTTTTATGAAAGG 100 34
        tatC  285164 ..  285217 +    -6  -4.49781   ATTGTGCAGCCGTAA CAGCGGCGATCCTCAATGCCCGGACA ATCG TGTCTAAGC-T-GAGGCTCGGCGCTG TTTTGTCGATGTTTT  72 78
HC662_RS01570  286959 ..  286982 + -12.4  -4.44797   TGTAAACATAAAAAA          GCCCCTGAAC ACAA GGTCAGGGGC           TTTTCATATTAATGA 100 36
HC662_RS01585  290410 ..  290427 +    -7   -5.4477   GAGTATTAAAGAAAA             GAAGGC GAATAG GCCTTC              TTTTTTTGGGCATTT  91 32
        lipA  291221 ..  291251 + -17.2  -3.60151   AACTAACGAGATACA       TAACCTTGAAGAAT TCT ATTCTTCAAGGTTA       TTCTGCTTTCAGCAC 100 35
HC662_RS01600  292953 ..  292977 + -15.9  -6.02919   CTCATAATGAAAAAA          CCTTGAAAAGC CGA GCTTTTCAAGG          TTTTTTTATTTCTGA 100 34
        natA NONE
        natB  296709 ..  296727 +  -7.5  -5.05601   AATAAACTTGCAAAA             GGAGAAA TACAC TTTCTCC             TTTTTGTATATCCTG  89 36
HC662_RS01625  297771 ..  297795 + -15.9  -4.30559   TTTTCACATAAAAAA          GGAAATAGCCT TGG AGGCTATTTCC          TTTTGGGGTTTTATT 100 30
HC662_RS01640  300709 ..  300739 + -14.2  -5.00895   ACAATAATAGAAAAG       GACCTTTCTTCACT TTA AATGAAGAAAGGTC       TTTTTATATAATAAA 100 122
HC662_RS01645  302312 ..  302323 +  -4.4  -3.83561   TTCCATATCCCATAT                GATG TTGC CATC                 CTTTTTTTGAAGGGC  56 179
        rapJ  303919 ..  303942 + -11.1  -5.38321   TTTCAATAGAAGATG          GCAGAGAAC ATACAG GTTCTCTGC           TTTTTTATGCTGTTT 100 32
HC662_RS01660 NONE
HC662_RS01665  306518 ..  306536 +  -8.8  -5.22312   AGTCAAATGACTCAG             CCCGGC ATTTTCA GCCGGG             TTTTTTCATGTACAT 100 31
HC662_RS01670  307676 ..  307701 + -14.1  -4.55295   GGTTAAATCATAAGA         TAGTGTGCGCC GGAG GGTGCACACTA          TTTCTTTGTGAGAAA 100 28
        znuC NONE
        znuB  309232 ..  309255 +   -14  -5.60993   CCAGTAACATGAAAA          GCAGTTTTCC ACAG GGAAAACTGC           TTTTTTTATAAGAAC 100 34
HC662_RS01690 NONE
HC662_RS01695 NONE
HC662_RS01700 NONE
HC662_RS01705  313195 ..  313217 +  -4.8   -5.4505   AATAAAACAAAACAA           GGAGGGAGGT TCA ATATCCTTCC           TTTTTTGTTACAGAA  82 36
HC662_RS01710 NONE
HC662_RS01715  315995 ..  316017 + -17.8  -5.00138   CAGCAATAAAAAACC           CCCCGCTTGT GAA ACAAGCGGGG           TTTTTCATTTACATC 100 32
        niaP  317316 ..  317335 +   -10  -5.22039   GCTTGAATAGGAAAA            GCACCTCG TGAA TGAGGTGC             TTTTTTACATTTGCA 100 31
HC662_RS01735 NONE
HC662_RS01740 NONE
       opuAC  322155 ..  322190 + -16.4  -4.15222   GATTTGAAGAAATAA    TGAAGAAAGCAGCCTG TAGC CAGGCTGCTTTTTTTA     TTTGTTAAGAAGCGT 100 26
HC662_RS01755  324937 ..  324959 + -13.4  -4.30416   GTTTTAACGATTGCT           GCCCGCCG GCTTGTA CGGCGGGC           TTTTGAGTTAATCAT 100 34
HC662_RS01760  325523 ..  325547 +  -5.1  -6.02919   AGAAGAAGTAGAAAA          GAAATCATC TTAGTGT GATGGTTTC          TTTTTTTGTTTGTAA 100 13
HC662_RS01765  327805 ..  327825 + -12.7  -5.84381   AGGAAAAATCCCCAA            GAAACCATC CTG GATGGTTTC            TTTTTTTGTTCATAA 100 55
HC662_RS01770 NONE
HC662_RS01775  330582 ..  330606 +   -13  -5.59655   TTGTAATCGAAAAAA          GCAGTACATG TCAGC CATGTACTGC          TTTTTTGTTAATTTG 100 35
HC662_RS01785 NONE
HC662_RS01790 NONE
HC662_RS01795  334275 ..  334298 +  -5.2  -5.53991   ATAAATCACGAGCTG          GCAGGGCTGT CTTT ATGTCCCTGC           TTTTTTTGATAGATC  85 37
HC662_RS01805 NONE
        nadE  337294 ..  337312 +   -16  -4.50976   AAATAAATGAAGAAA             GCCCGCTC TGA GAGCGGGC             TTTTGTCATGTGCAG 100 35
HC662_RS01820  338747 ..  338787 + -16.3  -4.49939   GGGATCTTTATCAGC  CAATGTAAAAAGCCGTGCG GTG CGCACGGCTTTTTTTATCG  TTTTATGCCTTGTAT 100 18
HC662_RS01830 NONE
HC662_RS01835  341677 ..  341697 +  -3.1  -5.60993   ATTAAACGGGAAAAG            CCGCCGCGT ATC ATCAGGCGG            TTTTTTTCTGCAAAC  81 40
HC662_RS01840  342521 ..  342546 +  -2.6  -4.67256   GTGTGGAAGGATGGA         GGAAGCTGATG TTTTT TGTC-GCTTCC         TTTTCTCCTTTATTC  62 17
HC662_RS01845 NONE
        pruA  345208 ..  345234 + -10.9   -3.7829   TAAAGCGGGACTAAA         TGGGCATCCTC CCTGC GGGGATGTCCA         TTTCATCCATATACT  84 38
        putP  346747 ..  346785 + -16.2  -3.08032   GTCACAATAAAGATC   GAAAGGAGGAGGAAGGGG TTG TCCCTTTTTCCTCTTTTC   TCCTTTTAAGCGGAC 100 31
        putR  348136 ..  348151 +  -7.6  -3.94853   AGAAATAAAAAGAAA              CCAGTA CTTG TACTGG               TTTCGTCTTCACTTA  74 33
        ffoR  352030 ..  352046 +    -8  -2.73483   TGCATAAATAAAACA              GCCCTT GAGAA AAGGGC              TGCTTGCAATCAGCT  62 30
HC662_RS01910  362290 ..  362309 + -12.2   -5.8901   ATTTAGGCTTTGACG            GACACGCA TTTG TGCGTGTC             TTTTTTATTTTCTCT 100 35
HC662_RS01915 NONE
HC662_RS01920  363939 ..  363951 +  -6.3  -4.36914   ACATACGATTTAAAT                CGTAA CAA TTACG                TTTTGTAGAGAGGAG  72 73
HC662_RS01925 NONE
        zinU  366384 ..  366403 +   -10  -5.52384   AATCAATAAAAAAAA            GCCGTCTCC TGC GGAG-CGGC            TTTTTTTAATGAAAC 100 32
HC662_RS01945  368805 ..  368824 +  -8.6  -5.58522   CGAACAGATCAGAAA            GAGCGAAT AATG GTTCGCTC             TTTTTATTTTGTATG 100 16
HC662_RS01950  369238 ..  369259 +  -9.5   -4.5366   GCATTAAGACGGTAA           GCATCCAAT GGAA ATTGGGTGC            TTTTGAGTTTTTTGC  88 34
        bglC  370820 ..  370842 + -13.5   -3.5125   AAGTTTATAAAGAGT           CCCTGAGAG TCACT CTCTCAGGG           CTTTTTCATTACACA 100 31
        hxlR  375526 ..  375547 +  -5.1  -5.85178   AAGGAATCATTGTAA           GGCGCTCTT GAAT AAGGGTGTC            TTTTTTTTGCCTGTT 100 26
       srfAA NONE
       srfAB NONE
       srfAC  401474 ..  401490 +  -5.1  -3.07113   GAATTTCTTAATACA              CAAACCG TAA CGGTTTC              TTAAATGAGGTAATG  52 5
       srfAD  402257 ..  402279 +  -9.9   -5.8187   CAATCGTGATCAAAA          GCGG-ACAGC GCCT GCTGTTCCGC           TTTTTTTGTTGAGTG 100 32
HC662_RS02025  407029 ..  407045 +  -7.9  -2.51725   GCGTCAGGAAGATCA              GGGATGC AGG GCTTCCC              GTATTCCTGTGCGCT  58 459
HC662_RS02060  412074 ..  412093 +  -3.6  -2.73635   AACAAAAAGGAGGAG            CTTGATCA TGGC TTATCAAG             ATTTCAGAGAATTTC  45 21
HC662_RS02065 NONE
        bsdD NONE
HC662_RS02075  414215 ..  414235 + -16.9  -5.38839   GCAATAATATCGAAA            GCCTGACGC CAT GCGTCAGGC            TTTTATTTTTATATA 100 34
HC662_RS02080  415126 ..  415152 + -13.1  -4.51812   GGACAAATAAAAAAA        CAGCCCGCG-AT CAAA ATCCGCGGGCTG         TTTCTTATTATAAGA 100 31
HC662_RS02090  418681 ..  418694 +  -5.2  -4.97383   CGCCTGAAAAAATCG               CCCC GCTCTA GGGG                TTCTTTTTTTTCGCT  74 34
HC662_RS02105 NONE
HC662_RS02110  423036 ..  423060 +  -8.5   -5.1167   AAAAAACAATAAAAA          GAGCGGGGG GATGCAG CCGCCGCTC          TTTTTATGTTCACTT  91 29
        yclJ NONE
        yclK  427597 ..  427624 + -12.7   -5.1287   AGCAATAACATACAG        GGCGGCGGCAT CGTCAA ATGCAGCCGCC         TTTTTTGCATATCGC 100 33
        rapC NONE
        phrC  429007 ..  429041 + -12.3  -5.14563   AGAGGAATGACGTAA    GAACCAGCCCCTTCTC ATTA GAGAAGGGG-TGTTTC     TTTTTTAATCAGCGC 100 26
        yclN NONE
        yclO NONE
        yclP NONE
HC662_RS02170  434738 ..  434762 + -12.2  -5.67063   AAGTAAAACCAAAAA         GAGCCTCCGCT AAAA AGCGG-GGCTC          TTTTTTTATGATCAG 100 35
HC662_RS02195  438765 ..  438780 +  -6.1  -5.65177   CCGCTGGTGAATCAA              TCCCC TGTACC GGGGA               TTTTTTTATGCCTGT  89 31
        gabT  441592 ..  441611 +  -4.2  -2.56164   TGAAGGGCTCAGCAT            CTTGGAGG CGGG CCTGCGAG             CTTAATCATTGGAAA  47 1
HC662_RS02210  443092 ..  443116 + -16.5  -5.34365   AATGCAAGCTCCTGA          GAGTTGCCGGA TCT TCCGGCAGCTC          TTTTTGTTGTTCTGG 100 44
        glcU NONE
HC662_RS02220  444873 ..  444899 +    -8  -5.26875   CGGTTAAACAAAAAA         GCGACCCAGA CATGACA TCTGGATCGC         TTTTTTGATTAGGCA 100 34
HC662_RS02240  448278 ..  448297 + -11.4  -5.61881   AGAGGAAAGAGAAAA            GGCTCCTG ATAT CAGGGGCC             TTTTTATTTTTAACA 100 17
HC662_RS02245 NONE
HC662_RS02250 NONE
HC662_RS02255  451475 ..  451497 +   -12  -5.45726   CTCAACCAATAACCG           ACCCGTGACA GCA TGTCACGGGC           TTTTTTTACCATCTC 100 29
HC662_RS02260  452634 ..  452654 + -11.1  -5.31275   AATCATAAAACAGGG            CGGGGCAGT TTT GCTGCCTCG            TTTTTTATGATGGAA 100 33
HC662_RS02270  453701 ..  453724 + -11.8  -4.16371   GAAAAATGAAAAAAA          CCCTTCACAA CGAT TTGTGAGGGG           TTTCATTATTTCGTA  90 32
HC662_RS02280  454780 ..  454801 +  -5.8  -5.37593   GGGTACTATAAAAAA           AGGAGTCC TAAGAT GGACTCCC            TTTTTTAGTTTGGCA  85 30
HC662_RS02285 NONE
HC662_RS02290  457177 ..  457207 +  -4.7  -2.71144   TGTCCTGTGCTGGAT      GTGACAGAAGCAGG TTCG CCTG-TGCCGTCAC       TGGTTGCGCCGGATG  49 220
        pxpB NONE
HC662_RS02305 NONE
HC662_RS02310 NONE
HC662_RS02315  461024 ..  461062 +   -17  -2.92018   AAGAATTGTCAGTTT   CATAAAAAACGCGCCT CATGACA GGGCGCGTTTTTTATG   TGTGATTGAAATATT 100 21
HC662_RS02320  461734 ..  461744 +  -5.4   -2.7363   GCATTGCTGCCTCTC                 TGAC CAT GTCA                 TCCCTTCTTTCCTTC  49 312
HC662_RS02330 NONE
HC662_RS02335  464908 ..  464929 + -10.9  -4.76312   ATTCCATAACAAAAA           GCATCAGCT TAGC AGCTGGTGC            TTTTTCAATATTGTC  91 32
        mtlR  467186 ..  467209 + -11.8  -4.99035   CATAACAGTACATGG          CACACGTCAA AAAA TTGGCGTGTG           TTTTTATGTGAATGG 100 36
HC662_RS02345  468903 ..  468930 + -21.4  -3.66178   TACATTCGTAAAAAA        GAAGCCCGCCAC TTAT GTGGCGGGCTTC         TTTGCAGTTGCACAG 100 30
HC662_RS02355 NONE
        lyxE  471042 ..  471064 +  -5.6   -5.0916   GATCCAAGAATATAA          GGATGAGGC GTAACA GCC-CATCC           TTTTTGTATTGAAAA  78 26
HC662_RS02365 NONE
HC662_RS02370  472578 ..  472598 + -10.4  -5.84381   AAAGAATAAGACAAA           CCGCTCGGC GTAC GCCG-GCGG            TTTTTTTATTGCTAA 100 422
         amj  473505 ..  473527 + -13.5  -4.62872   GGTTTTAATAAGAAA           GGCTGGATC ATAAA GATCCAGCC           TTTTTCGCACTTACT 100 33
        lrpC NONE
HC662_RS02390  476711 ..  476729 + -10.3   -5.4756   TAAATAACAGAAAAA             CCTGTGC ATATC GCACAGG             TTTTTTATTGGACTT 100 34
HC662_RS02395 NONE
        epsK NONE
HC662_RS02405 NONE
HC662_RS02410 NONE
HC662_RS02415  483919 ..  483938 +  -9.3   -6.4275   TGATACAGAATAAAA            CAGAGGC AATTTA GCCTCTG             TTTTTTTTATTTTTG 100 28
        kimA  486222 ..  486244 +  -9.2  -5.40072   AAAGTAAAGCTCTAG           GACCAAGG GAATCCA CCTTGGTC           TTTTTTTGCGGGAAA 100 34
HC662_RS02425  486734 ..  486745 +  -2.2   -4.0348   TGATAAAGGTATCCG                GGTT TTAA AGCC                 TTTCTCCTGTGGTAT  52 38
HC662_RS02430  488518 ..  488539 + -10.1   -5.0916   GTTATTCTAAAAAAA           CAGGGGCCT GAAA AAGCCCCTG            TTTTTGTGTTGGAAA  93 31
HC662_RS02455  492414 ..  492439 +  -6.1  -5.52384   ATGGAATAGCAGAAA         GCAGACGGA CACCGCGA TCCGCCTGC          TTTTTTTAGTGGAAA  89 32
HC662_RS02460  492944 ..  492969 + -12.6  -5.45802   ACCTGTAGATAAAAA         GCGATCCGGC GCATCA GCTGGATCGC          TTTTTATTTTGAAAA 100 62
HC662_RS02465 NONE
HC662_RS02470  493736 ..  493767 +   -14   -4.7373   TTCTGAAGGCATAAA      CA-AAGCCCAAAACA TCA TGTTTTGGGCTTGTG      TTTTTACTCGCGTCC 100 27
        dctS NONE
        dctR NONE
HC662_RS02495  499473 ..  499490 + -12.7  -5.73672   AGTCTGAAAAAAGAG             CGGCCCA TCAG TGGGCCG              TTTTTTTAATTGTTT 100 34
HC662_RS02500  500867 ..  500889 + -13.4  -5.00616   GATGATACATCCAAA           GCCTGCGGGA GTC TCTCGCGGGC           TTTTTTCAAAAAAGG 100 228
HC662_RS02505  502187 ..  502216 + -12.3   -5.4505   ACAAATGCTATAATA       CAAACAGTGCCTA ATTT TAGGCACTGTTTA        TTTTTTGTTGAAAAA 100 58
HC662_RS02510 NONE
HC662_RS02515  503975 ..  503986 +    -3  -4.63479   GCTCACGTGAATCAA                TATC ATTT GATA                 TTTTGGTTTATACTA  62 69
HC662_RS02520  504363 ..  504388 + -13.3  -5.93809   CAAATCCTGTGTAAT         CGCGCTGTTCC TGGG GGAACGGCGTG          TTTTTTTTATACCGG 100 27
HC662_RS02525  505644 ..  505657 +  -8.1   -5.1383   GAGTCATGAAAAAAA               GAGCC TTTC GGCTC                TTTTTATGTATTGTT  91 32
HC662_RS02540  507261 ..  507275 +    -5  -2.74192   TTATTCAGCTCATAC               CAATCG TTT TGATTG               TACTCTTCCAAAATA  47 209
HC662_RS02550  508661 ..  508686 +  -8.3  -4.18401   ATTCTAATGAAGATG         GGCACTGCC GGTAAGAG GGCAGTGTC          TTTTCCCGTATATAC  79 34
HC662_RS02555  510414 ..  510437 +  -7.5  -4.43844   GTATACGGATGGATC          CTGTCCTTT TTGTCT AAAGGGCAG           TTTTATAAGTGGTAA  80 342
        cshA  511997 ..  512019 + -12.1  -5.49569   TTCTATCGATTAAGA           GCCCAAAAC ATAAC GTTTTGGGC           TTTTTTATGTTCATG 100 41
HC662_RS02565 NONE
HC662_RS02570  514090 ..  514114 +  -6.4  -5.75342   GGTACTCATATGAAA         AAGCGGACGGT TAAT ACCG-CCGCTC          TTTTTTTTGCACACA 100 12
HC662_RS02580 NONE
HC662_RS02585  516349 ..  516367 +  -8.9  -5.52384   TAAATAATTGCCAAA             GGCCAAA CATGA TTTGGCC             TTTTTTTCGTCAGGC 100 34
         alr  517626 ..  517640 +  -2.8  -3.14463   ATGCAAGCAAATAGC               ATCTCA TAA TGAGAA               TTCATAAAACAGCTT  44 27
        endB NONE
        ndoA  518388 ..  518406 +  -8.9  -6.09196   TAGACATATGTGTAG             GTTGCTC AAATA GAGCAAC             TTTTTTTGTTTTCAA 100 38
       rsbRA NONE
        rsbS NONE
        rsbT  520071 ..  520083 +  -7.7  -3.05816   GGAACAGAGATACAA                GCCAT TAA ATGGC                TTCGGTAGGAGGTAA  65 5
        rsbU NONE
HC662_RS02625 NONE
        rsbW NONE
        sigB NONE
        rsbX  523350 ..  523369 +   -10  -5.82281   GAAGTCAGAAAACGA            GAAGCTGG AATA CCGGCTTC             TTTTTTTATGTGTTT 100 41
HC662_RS02645  525603 ..  525620 +  -9.9  -5.21709   ATGGTAAAATAAAAG             CACTGCT TACG AGCAGTG              TTTTTTCCTATAGAA 100 29
HC662_RS02655  526368 ..  526390 +  -3.4  -3.01745   CTTGACACTGTAAAT           CGAGGCTGAT ATA ATAAGTCTTG           TCTCATTATTCCACA  45 116
HC662_RS02660 NONE
HC662_RS02665 NONE
HC662_RS02670 NONE
HC662_RS02675 NONE
HC662_RS02680 NONE
HC662_RS02685  526972 ..  526986 +  -4.3  -2.52676   AATTACAAAGTGCAC               GCAAA TCGGT TTTGC               TAGGTTAAGAGCCTA  47 45
HC662_RS02690  527122 ..  527153 + -11.1  -5.60993   TCGGCCGCATCCCAA      TAATACCAAGGGT TTAACC ACCTTTGGTATTA       TTTTTTTGTGAGGAA 100 32
HC662_RS02710 NONE
HC662_RS02715 NONE
HC662_RS02720  530159 ..  530169 +  -3.2   -4.3255   CTGTATAACTTATGT                 CGCT AGG AGTG                 TTTGTTCCTTGAAAA  60 20
HC662_RS02725 NONE
HC662_RS02730  531022 ..  531033 +  -2.2  -3.61398   CCCTACAATTGAACT                TGGC GAAT GTCA                 TTGTTGCGAGGAGGA  48 140
        conQ NONE
        nicK  533777 ..  533790 +  -5.3  -3.18264   CCTCTTGGCATTGAA               CAAAC AACC GTTTG                TTCCTGCCTACCGGC  54 151
HC662_RS02750  535618 ..  535633 +  -6.1  -3.58914   AAGTTAATTAGCATT              GCACC TATAAC GGTGC               TTATAATTCCTTTCA  61 319
HC662_RS02760  536377 ..  536399 + -11.4   -5.3321   GTGATGAACAAGTAA           GGATGTTACA ACA TGTAGCATCC           TTTTTATTATTCCTT 100 316
HC662_RS02765 NONE
HC662_RS02770 NONE
HC662_RS02775 NONE
HC662_RS02780 NONE
        conE NONE
HC662_RS02790 NONE
HC662_RS02795 NONE
HC662_RS02800 NONE
HC662_RS02805  545188 ..  545198 +    -4  -3.99062   AAAAGTGGAAAAGAT                 CAAA TTG TTTG                 TTTATACTAAATATT  57 40
HC662_RS02810  545611 ..  545637 +  -8.1  -5.90231   GAAGAAACTAAGTTA         GAGGAGTAAAC CATGT GTTTGCTTCTC         TTTTTTTCTGTTTAT 100 17
HC662_RS02815  547021 ..  547039 +  -3.1  -5.52023   GGGAAAGTGAGAAAA             GAGAGGC GTTAA GTCTTTC             TTTTTTGTTCGTGAT  81 88
HC662_RS02825  548738 ..  548762 +  -6.5  -2.77936   ATTTTAATAGCTTTA          TTCATTCCTAC GGT GTGGAAATGAA          ATTATATATAATGTT  57 457
HC662_RS02845  552871 ..  552890 +  -7.9  -5.63517   GTGGGTGCATAAAAA            GGAAGGT GATTAG ACCTTCC             TTTTTTATTTGAGCG 100 114
HC662_RS02850 NONE
HC662_RS02855  553904 ..  553925 +  -4.4   -5.7946   GATTAATTTTTTAAA           GGCGTTGA ATTTCC TCGATGCC            TTTTTTTGTTAGAAG  90 35
HC662_RS02860 NONE
        cspC  556291 ..  556312 +  -8.7  -5.84432   AATCGTGTATACAAA           CAGGCTCTT TATA GAGGGCCTG            TTTTTTTATGTTCTG 100 46
HC662_RS02880  559681 ..  559691 +  -3.2  -5.84432   CTAATTTCGAGGAAA                 GAGG CCT TCTC                 TTTTTTTGTGTTGTG  91 121
HC662_RS02885  560804 ..  560825 +  -7.4  -4.81249   TGTCTAAACAAGAAA           CATACCAA ATGATA TTGGTATG            TTTTTAAATTTCACC  81 89
HC662_RS02900  563560 ..  563572 +  -6.3  -2.81702   ACGAAGAATATCGTG                CACAT CTT ATGTG                ATCTTTGTTCAATGG  54 203
HC662_RS02910  565221 ..  565264 + -12.6  -4.00042   TGATTAACAAATAGA AAGAGACTAAGGCTGTCGAAA TCA TTTCGGCAGCCTT-GACTCTG TTGTTTGATCAACAA 100 27
HC662_RS02930 NONE
HC662_RS02935  570723 ..  570743 + -15.5  -3.66018   GCAATAACGCAGAAA            GCCCGCTTT TCT AAAGCGGGC            TTATTCAAATACTAA 100 34
HC662_RS02950  573130 ..  573155 +  -9.8   -5.5454   CCTCAATCATAGAAA         TACCAAGGGT TTATAC GCCCTTGGTA          TTTTTGTTTATTTAC 100 118
HC662_RS02960  574340 ..  574360 +  -3.3   -5.7946   TTTAAGTTGTGAAAA            TCCTGTT CTCATCA AGCAGGA            TTTTTTTGTTCAGCA  88 44
HC662_RS02970  576485 ..  576499 +  -2.8  -2.74701   ATGCGTTTGAGGGAG               TTCAAG CTA CGTGAA               TCATATTAGGGATCT  42 12
HC662_RS02975  577102 ..  577123 +  -8.7  -5.10029   TACTTGCAAAGTAAA           CAGGCCTCT AAAG AGAGACCTG            TTTTTTAAAATTAAT  91 27
HC662_RS02990  581030 ..  581051 +  -3.2  -3.51232   TATAATCAATTAGCC           TATATAAT GATTTA ATTATATA            TTGATTTAAAGGAGG  49 36
HC662_RS02995  581431 ..  581444 +  -3.1  -3.13751   AGTAAGGAGGTATTA               GATTG ACTT CAGTC                ATTTTGGCGTTATTC  46 36
HC662_RS03000 NONE
        arsC  583227 ..  583256 + -14.4  -5.85244   AAAGGTGTTGTTCAA       CAGGTGTCTGCG GGCTAG TGCAGACACCTG        TTTTTTGTTTTCATT 100 77
HC662_RS03010  584495 ..  584506 +    -3  -3.32769   AATTGTGCGCCTTCG                TGAA TAAT TTCA                 TTAATAATTTCACGC  47 363
HC662_RS03040  590564 ..  590584 +  -8.3  -4.08767   TCACTAAAAAAGAGA            CCAAGCC TGATGAT GGCTTGG            TTTTGAAAAGGTAAA  79 63
HC662_RS03050  592038 ..  592071 +  -8.3  -5.20783   CTCACATATAATAAA     GAAGGAGTGGGAT TCGATAAT ATCTTACTCCTTC      TTTTTATGTTTAAGT 100 71
HC662_RS03070 NONE
HC662_RS03075  595059 ..  595078 +  -6.5  -6.25578   TGAAATTTGCCCAAA            CGTACAT GCCCGA ATGTACG             TTTTTTTTATTTCAT 100 52
HC662_RS03080  597337 ..  597356 +  -7.9  -5.69793   TGTGTAGTAGAAAAA            GCAGATC TTTCAT GATCTGC             TTTTTTGTTTAATAT 100 34
HC662_RS03100 NONE
HC662_RS03105 NONE
HC662_RS03110  602650 ..  602678 + -14.8  -5.10163   TATTCAAGTATCTAA        GAACAGTTACTG CTCGC CAGTAACTGTTC        TTTTGTTTTGACATT 100 41
HC662_RS03115  603188 ..  603203 +  -7.5  -4.91109   CTTTTCAAATGAAAA              GCCCC CTTTAA GGGGC               TTTTTGTCATAGAAA  86 51
HC662_RS03125  605655 ..  605686 + -11.8  -4.83615   CCAACGGCATGAAAT      AATACTCACAAGTA ACAT TACTTGTGAGTATC       TTTTTGTAGGGGATG 100 285
HC662_RS03130 NONE
HC662_RS03135  606761 ..  606778 +  -9.1  -5.52384   ATTTGTACGTTATTC             GTCCGGC ACCG GCTGGAC              TTTTTTTCATAAAGG 100 137
HC662_RS03140  607589 ..  607613 + -14.4  -3.16553   CGATAACTTGAAAAA          TACCAAGGGC GAACA GCCCTTGGTA          TCTCTTAATCGTTAT  95 336
HC662_RS03160 NONE
HC662_RS03165  614934 ..  614956 + -13.6  -5.60993   GAATAACCAAGAGAA           GAGTGATGAA TAG TTCATCACTC           TTTTTTTATGACAAA 100 35
HC662_RS03170 NONE
HC662_RS03175  616423 ..  616465 + -20.3  -3.80893   AACGGCGGCTTTATT TAAAACAAAGAGCCC-GGAA AATA TTCCTGGGCTCTTTGTTTTA TTTCCATTCTGCAAT 100 23
HC662_RS03195 NONE
HC662_RS03200  619434 ..  619456 +  -5.6  -5.14985   TAACGGAACTCAAAA           GATCAGGG CAGCAGA TCCTGATC           TTTTTGTGTCTTTCG  78 51
HC662_RS03205  620820 ..  620836 + -10.9  -5.86465   CCAATAAATAAAAAA              CCTGACA ATA TGTCAGG              TTTTTTTGTCTTATT 100 34
HC662_RS03215  622510 ..  622538 +    -6  -5.47431   ATATGCGTGATCCGG        AACCAAGGGG GAGAGCTGA CCCCTTGGTA        TTTTTTATGTGTTCA  85 40
HC662_RS03220  623891 ..  623909 +  -7.4  -5.22039   GAAAGGTATAAAAAA             GACACCAA AGC TCGGTGTC             TTTTTTGGATTTAAG  91 30
HC662_RS03225  625240 ..  625268 + -16.1  -2.92667   AAAACAGATAAGAAA        AGAACTCCCGTAC CTG GTACGGGAGTTCA        TCATTTAAAACTTGA 100 30
HC662_RS03240  628471 ..  628509 +  -4.5  -2.84098   GTATGTAATACAACC   GATGATTTCGCCGCTCT CATCT ACAGCGGCATAACCATC   TAATTCATTACAACG  48 300
HC662_RS03255  629692 ..  629707 +  -7.5  -4.77986   GTTACATCACTAATT              GCCGC GTAACA GCGGC               TTTTTCCATGTTTGG  84 28
HC662_RS03260  630472 ..  630491 + -10.8  -5.60864   TACATCATAAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTCTG 100 31
HC662_RS03270 NONE
HC662_RS03275 NONE
        celB NONE
        gmuD NONE
        gmuR NONE
HC662_RS03295 NONE
        manA NONE
HC662_RS03305  639239 ..  639264 + -11.9  -3.17212   GTCACACTTTATGAA         GGTGCCCAAGA ATTT TCTTGAGCACC          TTCATACCCTAATCA  87 53
HC662_RS03315 NONE
HC662_RS03320  640753 ..  640776 + -10.4   -3.3382   ATGCAGGTCACACAG          GTGTCACCGCA GGA TGCGGTGA-AC          TTAATCTGTGATCCA  79 148
HC662_RS03325  642407 ..  642432 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC662_RS03330  645549 ..  645567 +    -6  -4.49556   GTGAGAAACGCCCAG             TACCTTCA TCC TGAAGGCA             TTTGTTTGGTGGCGA  72 131
         rrf  645689 ..  645699 +  -2.6  -3.84406   GGACGCCGCCAAGCT                 TTTA TCA TAAA                 TTATTATCATCGCGG  51 27
HC662_RS03340 NONE
HC662_RS03345  645988 ..  646007 +  -5.7  -4.62441   TTTACTGTATCTTCT            GCTTGGT GTTATA GCCAAGC             TTTCTTTATATAGGC  72 88
HC662_RS03350 NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD  649939 ..  649958 + -12.2  -3.52177   TTCTGTGGATAAAAA            GCACCTCT AAAA AGAGGTGC             TTGACTTTTTTAAGA  90 222
        moaC NONE
HC662_RS03385 NONE
       tatAY NONE
        tatC  654147 ..  654179 + -13.7  -4.63526   TTCCGGGCAATAATA      AAAAATCCATTTCTC ATT GAGAAATGGATTTTC      TTTATTTCTGGTTCT 100 28
HC662_RS03410  655609 ..  655626 +  -6.3  -3.67597   CGTGAAAGCGACATT             TTAGCTG TTAT CGGCTAA              TTCTTAAATAAACAA  62 8
        groL  657387 ..  657425 + -16.2  -5.82281   ATTTATAAAATTTTC   GAGGCTTCTCATGAGTTC ACC GAACTTGTGAGAGGCTTC   TTTTTTTCTGTCTTT 100 105
HC662_RS03440 NONE
HC662_RS03445  661897 ..  661909 +  -6.3  -4.38472   GGTTATTTGTTTAAA                GCAAA ATA TTTGC                TTGTTTTCATTTCAA  72 63
HC662_RS03450  663396 ..  663436 + -11.6  -3.03575   TTGATCTTTCAGACG TCTTATCCCATAAAAA-TA ATAT TATTTTTTATGGGATAAGG  TCTATAGCTTTTTAT  82 79
        gutB  667288 ..  667309 +  -6.6  -3.59252   ATCGCTGAGTGAACA           GGGAGGAT CTTTGT ATTCTCCC            TCTTGTTTACTGGAA  65 33
HC662_RS03465 NONE
HC662_RS03470  669819 ..  669856 + -11.5  -5.96894   CTATAAAACATCGGG   GATGTTTCTTGAAAGTC TTTG GACTTTTGGGAAGCATC    TTTTTTTGTTTGCCT 100 35
        iolT  672906 ..  672929 +  -8.2  -4.74504   GGATAAGATAAAAAA          GAATCCGC ATACGTGC GCGGATTC           TTTTTAGGTTCAAAT  87 35
        walM  674814 ..  674833 +  -6.5   -5.1244   TATATAATCTGTAAA            GCAAGAA GTCACA TTCTTGC             TTTTTCTATTGGTGG  83 47
HC662_RS03495  675911 ..  675932 + -12.3  -5.14563   ATCAACTAATAAAAA           CCACTCGGC ATGG GCTGAGTGG            TTTTTTAATGGACGA 100 32
        mneS  682882 ..  682900 + -13.2  -5.53079   AACGCAAATAATTGA             GCTTCCTG TCA CAGGAAGC             TTTTTTGTGTGTTTT 100 30
HC662_RS03530 NONE
HC662_RS03535  685161 ..  685175 +  -3.5  -2.72371   TTCAGGTCATGAGGG               GCGGA CAAGT TTCGC               GTGTTGTTTAGAAAG  43 0
HC662_RS03540  687511 ..  687521 +  -2.4  -3.35912   GGCCTTGCCAAAGAG                 GGCG GAG CGGC                 TTCATATCTGTCCTC  45 115
        guaA  689279 ..  689309 +  -7.7   -3.2856   AATAAAATCACACAA       GAGATGACATATG ATTTG CATACGTCATTTC       TCTATTTGAAATTTC  67 181
HC662_RS03550  690955 ..  690974 +  -2.2  -4.75356   CCATGCGTTTTTCGG            CAACAA TCTTAAAT TTGTTG             TTTTTGGCTATATTT  67 341
HC662_RS03560  691742 ..  691755 +  -3.1  -3.83559   GTTGGAAGAGACAAT               TTACC CTAA GGTAG                TTGTATGTTTATTAG  53 88
HC662_RS03565  693330 ..  693358 + -12.6  -3.53012   CGAAAAATGATGGCC        TCATGTTGAGCG TTCTT TGCTCAACATGA        TTTAACAGCAAAAAA  95 151
HC662_RS03570 NONE
HC662_RS03575  695046 ..  695066 +  -2.6  -2.89039   TAGCGTGGAAAGGGA            GTGTTGTA ATGGG TACAACAA            TATGTAAAGATGATT  42 38
HC662_RS03580 NONE
HC662_RS03585 NONE
HC662_RS03590  696870 ..  696917 + -15.2  -4.58685   GGGAATAAGTAAATA GCTAATAGAAAAACGTCCCTTT TATA AAAGGGGCGTTTTTTTGTTAAC TTTTTGAAACCGTTT 100 139
HC662_RS03595 NONE
HC662_RS03600  699255 ..  699276 +    -8  -5.64421   CCGTCTGTAGTCAAG           CGTCCCAA AATGTA TTGGGGCG            TTTTTTATTTGACGT 100 333
        pbuG  700670 ..  700689 + -13.6   -5.7946   AATAAGGAATGAAAA            CCAGCTGC CGGT GCAGCTGG             TTTTTTTGTTGCAAA 100 36
HC662_RS03610  701682 ..  701699 +  -9.1  -5.71712   CTTTAATGAAAAAAA             CCGGCTG TTTA TAGCCGG              TTTTTTTATGTCACA 100 35
        fbpA  702020 ..  702037 +  -5.5  -5.85244   TATGAGAAGAGGTGA             GTCTGCT GAAA AGCGGGC              TTTTTTGTTTTGATT 100 46
HC662_RS03620 NONE
HC662_RS03625  703197 ..  703242 +  -4.1  -5.86976   ACGATACATGTACCA TGCCCGGTTTGTATTGC TTCCTCATAAGT GCAATGCAGAGCGGGTA TTTTTTATTTTCTGA  93 257
        purE NONE
        purK NONE
        purB  706205 ..  706223 +  -7.4  -3.48276   AGGTTTAGCATAGAA             GAAGCTGT TAG GCGGCTTC             TTCTATGCCGCCGCA  66 28
HC662_RS03645 NONE
        purS NONE
        purQ NONE
        purL NONE
HC662_RS03665  711567 ..  711586 +  -6.4   -4.1021   TGAAAATGACATAAA            GGCAGC GCAGTTCG GCTGCC             TTTCTCATTCTGCCC  71 45
HC662_RS03670 NONE
        purN NONE
        purH NONE
        purD  716103 ..  716122 + -10.7  -5.24129   ATAAAATGTAGAAAA            CCCGCAG ATTAAG CTGCGGG             TTTTTTATACAAAAG 100 37
HC662_RS03695  717943 ..  717979 + -12.5  -3.12083   AACGGGATGTCATGA    GAAAAAGCTTGATCATG TTT TGTGATCAAGCTTTTCC    GTTTATCTGTCTTGA  91 1
HC662_RS03705 NONE
HC662_RS03710 NONE
HC662_RS03715  721435 ..  721459 + -13.6  -4.55295   CGAAATAACAAAGAA         CCGCCC-TGCC GTTC GGCAAGGGCGG          TTTCTTTATGAAACA 100 33
HC662_RS03725 NONE
        pcrA NONE
        ligA NONE
HC662_RS03740  729533 ..  729574 + -10.9  -5.77853   ATTTATGACTAATAT TG-AATGACCCCTTGTGCCG CTG CGGCGCAGGGGGTTTTTGCG TTTTTTTTGAAGGTT 100 29
HC662_RS03745  730870 ..  730880 +    -4  -3.77906   TTTTATAAATATTTA                 CAAA TTA TTTG                 TTGTGTGTTTAAATT  55 47
HC662_RS03750  735403 ..  735413 +    -4  -2.79289   TCATTATCTATTGAA                 GAAT TGG ATTC                 CTTGTTCAAATGATG  45 2
HC662_RS03755 NONE
HC662_RS03760 NONE
HC662_RS03765 NONE
HC662_RS03770 NONE
HC662_RS03775  740513 ..  740528 +  -3.2   -3.2794   TCAGCCAATCACCTG              TTGCGG GAAG CAGCAA               TTAATCTAAATAGCG  48 6
HC662_RS03780 NONE
HC662_RS03785 NONE
HC662_RS03790 NONE
HC662_RS03795 NONE
HC662_RS03800 NONE
HC662_RS03805  766303 ..  766314 +  -5.8  -3.71913   AGAAGACTCAAAGAC                GCTG GAAA CAGC                 TGTTTTGAATATGAG  64 476
HC662_RS03815  773323 ..  773341 + -11.7  -6.23317   TCCTTAACAAAAAAA             CTCCGGC GGCGA GCCGGAG             TTTTTTTATTTTTGT 100 73
        gatC  777832 ..  777845 +  -2.4  -3.01162   CTGGACTAAAGGAGG               GACA CAAGAA TGTC                ATTATTTGATCATAA  42 32
        gatA NONE
        gatB  780750 ..  780767 + -12.7   -5.1861   AACGCTAATAAAAAA             GCAGCCC GCAG GGGCTGC              TTTTTTGATGGTCAA 100 33
HC662_RS03855  784924 ..  784952 + -14.7  -2.75845   GAAGAGTAAAAAAAC        AAAAAGCCTCAGC TCT GCTGAGGCTTTTG        TGCGTTTTCACCTGT 100 32
HC662_RS03860  785984 ..  786002 + -11.8  -5.33026   CTGGATGACTAAAAA             CTTGGCTT TTT AAGCCAAG             TTTTTCTTTCGCTTA 100 29
        rlmD NONE
HC662_RS03870  788451 ..  788477 +  -4.3  -5.55664   GCTGTGTTTGAACAA         GGAAACTTCCC CCTAT GGGGTGTTGCC         TTTTTTTAGTGATAA  84 123
HC662_RS03900  794312 ..  794326 +  -2.8  -3.78953   GTCTTTTTCTTTTTT               GTTCAA GAG TTGATC               TTTGCTGATAACGGT  51 77
HC662_RS03905  795288 ..  795306 +  -8.9  -5.76949   TATGAAATAAGCATG             GACCCTT GCGTA AAGGGTC             TTTTTTTTGCGGATA 100 51
HC662_RS03910 NONE
HC662_RS03915  796723 ..  796737 +  -7.1  -5.24551   GATCAGAAGAAGAAA               GCCCT TAGCT AGGGC               TTTTTCTTGCTTTAC  91 14
HC662_RS03920  797621 ..  797639 +  -7.4  -5.93252   GTGAATAAGAAGTGA             GCAGACTG TCA TGGTCTGC             TTTTTTCTTTTTAGC 100 33
HC662_RS03925  798122 ..  798142 +  -9.8  -5.69068   TGATGTAAAAAGAGG            CACTCTTG CAGTT CAAGAGTG            TTTTTTATCTTTTTC 100 44
HC662_RS03930  798798 ..  798820 +  -3.5  -2.94938   GGTGCTTGATTAACA          TGTGGTAAAG GATT CTTTGCC-CA           TGTATGCACTTTTCG  45 28
HC662_RS03935 NONE
HC662_RS03940  800190 ..  800211 + -14.5  -3.95725   TGATCAGTCTGAAAA           GACCTTCGG CTTG CCGAAGGTC            TTCTTATTAGAGATT 100 54
HC662_RS03945 NONE
HC662_RS03950 NONE
       cotJC  801482 ..  801495 +  -3.1   -4.8622   CATTATAATCAAGGT               GTGAG CAAG CTTAC                TTTTTGATTGGGAGG  69 114
HC662_RS03960  802059 ..  802076 +  -5.5  -5.69068   ATTTCGGCAGAATAA             GCGTCCT TTGC AGGAGGC              TTTTTTGTCTTTTTC  95 26
HC662_RS03965  802385 ..  802395 +  -4.6  -2.84634   CAGGAAAAAATAAGG                 GCGG CGG CTGC                 TCTCATGATGTCGAA  48 28
HC662_RS03970 NONE
HC662_RS03975 NONE
HC662_RS03980  805939 ..  805971 +  -4.2  -6.02546   GAATTCAGAAGAAAA     CAGGGAGGCGCT-TCC GCA GGATAGC-CATCTCTG     TTTTTTTTACTTTCA 100 2
HC662_RS03985 NONE
HC662_RS03990 NONE
HC662_RS03995 NONE
        yesR NONE
HC662_RS04005 NONE
HC662_RS04010 NONE
HC662_RS04015 NONE
HC662_RS04020 NONE
HC662_RS04025 NONE
HC662_RS04030 NONE
        mgrA NONE
HC662_RS04040 NONE
HC662_RS04045  822058 ..  822081 +  -6.8  -5.36441   GTTTGACAAATCGTA          GCTGATTC TTTGCATC GAATCAGC           TTTTTTCTATGGAGG  89 25
HC662_RS04050 NONE
HC662_RS04055 NONE
HC662_RS04060 NONE
HC662_RS04065 NONE
HC662_RS04070  829577 ..  829595 + -10.2  -5.61596   AATGATGTAAAAATG             GCAGCCGG CGA CGGGCTGC             TTTTTTTATCGAAAT 100 31
HC662_RS04075  830389 ..  830411 + -12.1  -5.31855   CATGACCGCAAAAAA           GAGCTTGCA GCTGG TGCAAGCTC           TTTTTGTTATTCGTG 100 36
HC662_RS04095  832933 ..  832968 +   -12  -4.98531   TAGGAAGTCTGATCA    GGCATATGATTGTCCG CCAT TGGGTGATCATATGCC     TTTTTGATTTGAACA 100 38
HC662_RS04100 NONE
HC662_RS04105  834006 ..  834027 + -12.3   -4.3129   ATGATTAATTAGAGA           GCGCCTGTC ATTG GATAGGCGC            TTTTCGTCATACATA  95 33
HC662_RS04110  834990 ..  835008 + -11.7  -5.32699   GAAAAGACGCTGTAG             CCCGTCC TGGTC GGACGGG             TTTTTTAGTCTTTAA 100 26
HC662_RS04120  836795 ..  836815 +  -5.4  -5.95946   TATTAAATAGGAAAA            GTCCAGTA TTGAT TTCTGGAC            TTTTTTTATTATTAC 100 35
HC662_RS04125 NONE
HC662_RS04130 NONE
HC662_RS04135  840998 ..  841019 + -10.9  -4.86731   AAAAACGTGAAGAGG           CAGG-GGGCA AAA TGCCCTCCTG           TTTTCTTTCAAAAAA  93 221
HC662_RS04145  845511 ..  845528 +  -9.9  -5.58209   GGTCGGGGCTGTAAA             GACTGGA GACA TCCAGTC              TTTTTTTGCCTTTCA 100 27
HC662_RS04150  847876 ..  847912 + -16.8  -5.95166   AAATAAGACGAGAAA   GAGCCTTGAGCG--GGCA CAT TGCCTTCGCTCAAGGCTC   TTTTTTTTGGTTACA 100 35
HC662_RS04155 NONE
HC662_RS04160 NONE
HC662_RS04165 NONE
HC662_RS04170 NONE
HC662_RS04175  852925 ..  852942 + -12.7  -3.66999   GCTGGATTAAAAAAA             CCCTGCC GCAT GGCAGGG              GTTTTTTAGCTATGC  95 31
        yfmT NONE
HC662_RS04200  859039 ..  859093 + -18.4  -3.66874   GGCAGAAAAAGCGCT TG-AGGA-AGAATAAAAGACCGGGGAC GAAC GTCCCCGGTCTTTT-TTCTATCCTGCA TTTCCATGAACTTAG 100 13
HC662_RS04205  861080 ..  861102 + -12.6  -5.06451   TTGAAAGTTAGAAAA           GTGCGGCCCG CAG CAGGCCGCGC           TTTTTTCACATAATG 100 30
HC662_RS04210  861662 ..  861680 +  -8.1  -6.15536   CAGGACAGTGAAAGA             CGGGTGC TTTAT GCACTCG             TTTTTTTTATTGATT 100 42
HC662_RS04215  862205 ..  862220 +  -5.4  -4.72007   GAAAAGTTTGCCAAA              CGCTAT TTTT GTAGCG               TTTCTTTTAATGGGA  74 39
HC662_RS04220  863456 ..  863477 + -10.9   -5.1861   TCATTAATAACGAAA           GACACTGCG CAGA TGCAGTGTC            TTTTTTAATCATGGA 100 34
HC662_RS04240  867448 ..  867466 +  -8.8  -5.55769   AAGAGAAAATAAAAA             GGAGGGCG GTA TGCCCTTC             TTTTTTGTTGTAAAA 100 29
HC662_RS04245  867978 ..  867996 + -11.7  -2.90455   CAAACCAACGCAAAA             GGAGGGC AAAAA GCCCTCC             GTGTTTTCATTATCA  82 44
HC662_RS04280  874051 ..  874078 + -11.4  -5.16472   AATGCAGGAATAGAA        CCCAAAAGGC AAACTTCG GCCTTTTGGG         TTTTTTGCGGTTTTT 100 39
HC662_RS04285  875505 ..  875528 +  -6.8  -5.32565   TAAGAAATGAAAAAA          CACAAAGG GCTGCTCA CCTTTGTG           TTTTTTAATTAATTA  88 38
HC662_RS04290  877066 ..  877082 + -12.3  -5.80951   TGGTAGAAAGAAAAA              GGCAGAC GCG GTCTGCC              TTTTTTATTTTCACT 100 35
        yflR NONE
        yflQ NONE
HC662_RS04305  880458 ..  880473 +  -6.1  -5.58454   GACAGGAAATTAAGA              TCCCG GCATAG CGGGA               TTTTTTTCATGTCGA  89 28
        citM NONE
HC662_RS04315  882986 ..  883003 + -12.7   -5.4593   TTAGCGTCTCTTTAA             CACCCGC ACAC GCGGGTG              TTTTTATTGTTTTCC 100 26
HC662_RS04320  884263 ..  884278 +  -7.6  -3.55444   GTCGGTAACATTTGA              GAAAGG GCTG CCTTTC               TTTACAGCCTCAAGA  66 94
HC662_RS04330  885200 ..  885223 + -11.7   -3.8046   CTGAATAGAAAAAAA          GCCGCGCAT ATCAAC GTGCGCGGC           TTTACCATTTTTAAG  86 33
HC662_RS04355  888480 ..  888518 + -15.7  -4.24745   AGAGCTGCGGTGAAA  TAA-AAAAAGCAGAGAGG CTAG CCTCTCTGCTTTTTCTTA   TTTATCTTCATCATC 100 23
HC662_RS04365  891131 ..  891155 +  -7.1   -3.6944   TTTTTCCTGTCTGAA          GGATGGCGATT GAT AAAAGCCATCC          TCTTTATGTTCCAGC  67 41
HC662_RS04370  892676 ..  892686 +  -6.8  -4.24384   TGTTTTGCGTTGGCG                 GCGA ACA TCGC                 TTTGCTTTTGATGAT  73 41
        treP  894907 ..  894942 +  -6.9  -5.00138   AACATAGATAACCAA    TGGGAAGCGGG-ACGT GTTGA ACGTTCCCTTTTCCCG    TTTTTAATTTAAATA  83 30
        treC NONE
        treR  897404 ..  897425 + -12.3  -5.99154   GGGAAAATGAGAAAG           GCGC-CTGCC TGT GGCAGTGCGC           TTTTTTTGTTTGGTA 100 31
HC662_RS04400  898212 ..  898235 +  -7.4  -5.71983   GGGTCTAAATAAAGA          AAGCTGCTCG ATAA TGAGCAGCTC           TTTTTTTATGCTTGA 100 33
        yfkM  903406 ..  903424 +   -16  -5.72053   GAGAAATAAGAAAAA             CGGACGCC CGG GGCGTCCG             TTTTTTATTTAATTA 100 32
HC662_RS04425 NONE
HC662_RS04430 NONE
HC662_RS04435  907085 ..  907109 + -16.5   -4.8622   ATCATTAGTATAAAA          GCCTCCTGACG TCA TGTCAGGAGGC          TTTTTGATTAGGAAG 100 192
         cax NONE
HC662_RS04450  910390 ..  910410 +  -9.8  -6.08342   AAGATAAACAAAAAA            CTGATTCC AACTC GGAATCAG            TTTTTTTATTTATTG 100 34
HC662_RS04465  912718 ..  912732 +  -8.5  -5.47159   AGATTGGGAATAAAA               CCGCG CATGC CGCGG               TTTTTTATATTGGCA 100 28
        pdaA  913614 ..  913635 +  -7.2  -4.59117   CTTTGTAACAAGAAA           GCCCCTCC TTAAAC GGAGAGGC            TTTTCTCATTACTTT  79 33
HC662_RS04485  916579 ..  916595 +  -5.2   -4.1347   TTATACTAGAAAGAT              GTGAAA AAACA TTTCAC              TTTCTGTCATTGCAG  63 75
        rlmD  918086 ..  918098 +  -6.9  -3.98256   CCGGTAAAAAACAAT                TCCGG TTT CCGGG                TCTTTTTCATGCGCC  72 70
HC662_RS04495  919476 ..  919504 + -17.7  -5.17353   GGTGGAAGAGCAGTA        GAAGAGGAAATCT GTC AGATTTCCTCTTC        TTTTTTGATCCATGT 100 25
HC662_RS04500 NONE
HC662_RS04505 NONE
HC662_RS04510  923636 ..  923656 + -15.5  -5.24796   ATGAAGCTGTTGAAG            TAGAGGGGG AAC CCCCCTCTA            TTTTTATTGTATGAC 100 23
HC662_RS04515 NONE
HC662_RS04520  924946 ..  924964 + -14.6  -5.09225   CGATCATTGTCAAAA             GACCGGGT GAT ACCCGGTC             TTTTTTGCATGCCAT 100 67
        acoA NONE
        acoB  927144 ..  927158 +  -4.2  -2.52464   TCACGCTTGAATTGC               TTGGCG AAC CGGCAA               TGAATTAAAGGGGGG  47 3
        catD NONE
HC662_RS04550  930427 ..  930454 + -11.3  -5.79595   GTGATTTGACTGTAA        TCCCTTTGCCG AAAAAA CGGCAGGGGGA         TTTTTTATTTTCCAG 100 32
HC662_RS04555 NONE
        lnrK  932434 ..  932448 +  -7.1  -5.54894   ACATTTCTCTGAAAA               GGCCT TTTAC AGGCC               TTTTTTTCATGCCTT  93 60
        lnrL NONE
HC662_RS04570 NONE
HC662_RS04575  935859 ..  935879 + -15.5  -4.60041   CCGCGCCTAAAAAAA            CATCTGCCC CCG GGGCAGATG            TTTTTCGCAATCAAT 100 31
        estB  937987 ..  938010 +  -8.2  -6.14618   ACGGGTGATTTGAAA          CCTGCTGT TAGTTAAT ACAGCAGG           TTTTTTTGTTTTCTG 100 54
HC662_RS04615  942953 ..  942977 + -13.6  -3.48321   GCAGGGTGAAAACAA          GCGGCAGGAG AGAGG TTCCTGCCGC          ATTTCTTTATTTCTC 100 32
        bstA  945595 ..  945607 +  -2.6  -3.66178   CTTGCATGAATGGCG                TCGC TTATC GCGG                TTTGGACTTCAGGCA  52 140
        mprF  950357 ..  950380 + -15.4  -5.95539   GGAAAAAGCAAAAAA          GACTCCGTCT AACC AGACGGAGTC           TTTTTTTATTTCGCC 100 14
HC662_RS04655 NONE
HC662_RS04660  953532 ..  953557 + -10.6  -5.55664   CTCTTAATTTTTACT         CCCATTTTCT CAAAAA AGAAAATGGG          TTTTTTTGATAATGA 100 34
HC662_RS04665  954555 ..  954573 +    -4  -3.14307   AAGATGCACTTTCCG             TTATTATT ATG AATGATAA             TCATTTTCAATTGCT  48 61
HC662_RS04670  955196 ..  955221 +  -9.8  -4.87893   CGACATGTAAAAAAA         CCCC-TGTCTC AAACG GAGACAAGGGG         TTTTTCATTAACGTT  93 31
        recX NONE
HC662_RS04695  957777 ..  957795 + -13.2  -5.36441   AGCAAGCGTAACAGG             GAGGCTGA ATA TCAGCCTC             TTTTTTATATGCAGC 100 30
HC662_RS04700  959109 ..  959129 + -11.2   -4.1023   TAAAGGGTAAAAAAA            CAGCTGCA GCGCA TGCAGCTG            TTCTTCTTTACCGTT  86 31
HC662_RS04710  959689 ..  959708 +  -6.4  -5.73563   TTTGCATTAAAAAAA            CTGCCG TTAGCATC CGGCAG             TTTTTTTCATTTCCT 100 31
HC662_RS04715  960350 ..  960367 +  -5.5  -4.67755   CAAATATGATAAAAA             GGCAGGC CGGG GCTTGTC              TTTTTGCCTGGATAT  72 32
HC662_RS04720 NONE
HC662_RS04725  961632 ..  961650 +  -9.6  -4.98522   ATTTTCTCTCCATTC             GTCTGTCA TAA TGGCAGAC             TTTTTCTGTGCGGTT  91 46
HC662_RS04730  962843 ..  962854 +  -2.2  -3.51573   ACTGAAATCACCAAG                C-GCC ATT GGCAG                TGCTTTTTTTGCGTG  46 36
HC662_RS04735  965469 ..  965502 +  -8.1  -5.25803   TTATATATAAGACGA     AAAAAGCCCGGCTCT AAAT AGAGCCGAGCTTTAA      TTTTTTCTGAAGCTT 100 5
        mutY  967853 ..  967863 +  -2.4  -3.38162   TCATTGCGCTTCATT                 CCGC CGC GCGC                 TTCAATTTCTTGCGT  45 87
        fabL NONE
HC662_RS04760  969201 ..  969225 +  -5.8  -5.56264   CTGAAACAGAAAAAA         GCACTT-CATC TTCG GGTGGAAGTGC          TTTTTTCTGTTTGAA  89 44
HC662_RS04765  969625 ..  969650 +    -9  -5.24291   GTGTAGAGCAGGAAT         GTGCCATTCC CCGGCC GGAATGGCTC          TTTTATTTTCATTTT 100 35
HC662_RS04770  970304 ..  970324 +  -6.9  -4.62336   ATGGTTACGTAAAAA            CCTGTTG CGGGGTA CAACAGG            TTTTTCACATGGGCT  79 40
HC662_RS04775  972126 ..  972155 + -11.7  -5.76633   TGAGCTGAACATCAA       TCTTATATCCTTT TAAC GAAGGATATAAGA        TTTTTTTGTATATAA 100 33
         bcp NONE
        perR  975959 ..  975997 + -13.4   -3.6834   AAAAAGAGAACCATT   AAAAATAAGCTGACCG CACGAAA CGGTCAGCTTATTTTA   TTTGGACATTTTCTT 100 24
HC662_RS04805 NONE
HC662_RS04810  979349 ..  979374 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 87
HC662_RS04815 NONE
         rrf NONE
HC662_RS04825 NONE
HC662_RS04830  982764 ..  982776 +  -3.3  -3.25942   TCAACTCCGTCTCAA                GGGTT CGA ATCCC                TTGCTCTCCGCCACT  48 0
HC662_RS04835 NONE
HC662_RS04840 NONE
HC662_RS04845 NONE
HC662_RS04850 NONE
HC662_RS04855 NONE
HC662_RS04860  983324 ..  983336 +  -4.9  -3.25942   CCTCTTGCCGGCACT                GTTTT TTC AAAAC                TTAATGTGGAGGGGT  54 26
HC662_RS04865 NONE
HC662_RS04870 NONE
HC662_RS04875 NONE
HC662_RS04880  983707 ..  983719 +  -2.7  -3.09933   CAATTTTATATCAAC                TGCAT ATG ATGTA                TTAAGTCCCTTAAGA  44 41
HC662_RS04885 NONE
HC662_RS04890 NONE
HC662_RS04895  983978 ..  984012 + -13.8  -3.81137   AAGTCCGGCCCTCGG     CACCAATTTTACTTAC TTG GTAAGTTGAATTGGTG     TTTGCGTGTTTAAAC 100 21
HC662_RS04900  984375 ..  984433 + -24.7  -3.16881   AAGATATTTCAGTTT -ATTATAATGTGCAAAAAAAAGATAGGT AATA ACCTATCTTTTTTTTGCACATTATAATA TTAGTAAGGTCGGTG 100 57
        loaP  986012 ..  986056 +   -24  -5.03994   CAAACTTGTAAACGA G-CCCCTTTCCAAGGGAAAAT TCAT ATTTTCCCTTGGAAAGGGGAC TTTTTGTATGTCAGG 100 63
HC662_RS04910 NONE
HC662_RS04915  988487 ..  988508 +  -9.5  -4.11394   TGCCATCTTAAATAA           GTTAGACCGC TAA GCGG-CTAAC           TTTTGAAGCTCAAGT  82 30
HC662_RS04920  989319 ..  989335 +  -4.5  -3.44319   ACTCTCTTTTTTATT              TCAAAAT CGG GTTTTGA              TTATCATGCATTGAA  53 109
HC662_RS04925 NONE
        fabD NONE
HC662_RS04935  992821 ..  992831 +  -5.4  -3.05982   TCCTTTATGAAAAAA                 TGCA GCA TGCA                 TGATTTATAATCTAT  54 12
HC662_RS04940  993774 ..  993797 +  -4.6  -2.82933   TCCACTTAATTATCA          TGGCATTCAG GCCT TTGAATCCCA           TATCATCCGTTACAA  46 297
HC662_RS05045 1006271 .. 1006299 +   -14   -4.8269   AATGTCCAAATAAAA        TAAGCTGACCGT TTCGT GCGGTCAGCTTA        TTTTTAATGGTTCTC 100 28
HC662_RS05065 1010069 .. 1010086 +  -9.1  -5.71712   GAAACAGAAGAGTAA             CCCGGTT GAAC AGCCGGG              TTTTTTTATATACAA 100 26
HC662_RS05095 NONE
HC662_RS05100 NONE
HC662_RS05105 NONE
HC662_RS05110 1050465 .. 1050476 +    -3  -3.93988   TGCCTTTGAAACGGT                GAAT ACGC ATTC                 GTTTTTTTAATCTAA  53 114
HC662_RS05115 NONE
HC662_RS05120 1060235 .. 1060246 +  -4.4  -2.66218   CTCTTGTGATTGCCA                GTGA TATC TCAC                 GCTTTTTAGTAGCTG  47 471
HC662_RS05130 1061854 .. 1061865 +  -4.4  -3.32984   AGAGAGAGGAGTGGA                GATG GTGA CATC                 TGTTGTACATTTTCA  52 50
HC662_RS05135 NONE
HC662_RS05140 NONE
HC662_RS05145 NONE
HC662_RS05150 1066582 .. 1066605 +    -9  -5.98675   TTGCAAAATAAAAAA          CACCTGTTTCA TCA TGA-ACAGGTG          TTTTTTATTTTTATA 100 45
HC662_RS05155 NONE
HC662_RS05160 NONE
HC662_RS05165 1070200 .. 1070211 +  -4.4  -3.21747   AAGGGGGGAAGGCAG                GAGT CGCG ACTC                 TTCCTGCTGGAATAA  50 120
HC662_RS05170 1071458 .. 1071486 + -10.4  -5.63504   CAGCGTTAAGTAGAA        GGTGATCTCTGT ATAAG ACAGGGATCATC        TTTTTTTATACCATT 100 434
HC662_RS05180 1073068 .. 1073095 + -16.4  -5.38951   GCAATAAAAGGAAGA        GACGGTCTCTCG TAAA TGAGAGACCGTC         TTTTTTGTATGACTT 100 34
HC662_RS05190 1074404 .. 1074427 +  -8.9  -5.33785   TCTTTCTGACTGTAA          CCGGGTTCA TTCATT TGAATCCGG           TTTTTTGTGCTGGTT 100 247
        thiC 1076341 .. 1076365 + -13.7  -5.36441   GATCGGAACACCGAA          GGCTCTTATCT TTT AGATAAGGGCC          TTTTTTGTATGAAAA 100 103
HC662_RS05210 NONE
HC662_RS05215 NONE
HC662_RS05220 NONE
        ssuD 1082646 .. 1082666 + -11.1  -4.11692   TTGCATCACTAGAAA            CGGGCGGCT TTC AGCCGTCTG            TTTTACAAATCGGTA  86 419
        rpsN 1083031 .. 1083056 +  -9.7  -5.85011   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 33
HC662_RS05250 1083999 .. 1084035 + -10.3  -5.71712   TACATACGTTATTAA    CGCAGTGTTTCGTTTCT CAG ATAAACGAAGTATTGCG    TTTTTTTATGTAAAA 100 40
        queG 1085967 .. 1085987 +  -4.8   -5.4251   AGAAGAAGGAAAAAA           CACTTGAGA TGCA TC-CAAGTG            TTTTTTCTCTATAAA  82 52
HC662_RS05265 NONE
        trmL 1087466 .. 1087487 +  -8.7  -5.55695   AAAATAGTGAAAAAA           CCCGCTC-TC AAT GATGGGCGGG           TTTTTTATGTTATTA 100 34
HC662_RS05275 NONE
HC662_RS05280 NONE
HC662_RS05285 1089669 .. 1089691 + -14.2  -5.77677   TCTGTTACACAAAAA           GGGTGCTCTT ATG AGGAGCACCC           TTTTTTATTCTTTTC 100 49
        prkA 1091898 .. 1091922 +   -10  -4.46581   AACCGATAAGCAACG          TGACCCGTCC GAATA GGGCGGGTTA          TTTTGTCCCATTTTC  89 32
        yhbH 1093247 .. 1093278 + -13.3  -3.73775   AGCCATCAATTTTCG      TAAAAAAAAGCCC GTTTCA GGGCTTTTTTTTA       TTTAATAAAAGTAAG 100 23
HC662_RS05300 NONE
HC662_RS05305 NONE
HC662_RS05310 NONE
HC662_RS05315 NONE
HC662_RS05320 1097168 .. 1097196 +  -7.5  -6.21477   GAAGTAATGAAAAAG        GCAAATCCGTT TACTCAT GGCGGATTTGC        TTTTTTTTTGCTGTT 100 34
HC662_RS05330 NONE
HC662_RS05335 NONE
HC662_RS05340 NONE
HC662_RS05345 NONE
HC662_RS05350 1101033 .. 1101056 +   -14    -5.252   GAACTAATGAAAAAA          GCTGTTTTGC TTAA GCAAAACAGC           TTTTTTATCGAAATA 100 34
HC662_RS05360 1102569 .. 1102595 + -11.8  -5.93809   TCTTTCAGATTGGAA         GAATGAATTCGA ACA TTGAATTCATTC         TTTTTTTTCTGAAAA 100 7
HC662_RS05370 1105277 .. 1105315 + -16.2   -6.2845   TTCATTTCAATAAAA   GAACCCATGAACCCTGTA ATA TAAAGGTTTCATGGGTTC   TTTTTTTTTATGATT 100 69
HC662_RS05395 1109016 .. 1109034 +   -11  -5.33026   GAATAAATGAAAAAA             GCCGCATA ATT TGTGCGGC             TTTTTCTTTGCGTTA 100 35
HC662_RS05400 1109606 .. 1109616 +  -6.8    -3.737   TGATTCATGAATACA                 CGCA CCA TGCG                 TTTCATCAGAAATTG  67 155
HC662_RS05405 1110082 .. 1110110 + -11.1  -2.79183   CATTTGTCCTTGTGC        AGGAGCAAATGAG TTT CTCATTTGTTCCA        TATCCTGCGCATCAA  78 14
HC662_RS05420 1115005 .. 1115025 +   -14  -4.71426   CGAGTCACTTAAAAA            GCCGCAGG CTATT CCTGCGGC            TTTTCTTCATGAAAA 100 29
HC662_RS05430 1116458 .. 1116483 +  -7.7  -5.08824   ATAATCAGGTAGCAA         GAGCTTTTC CATTTTCA GAAAAGCTC          TTTTTTGCATCAGAG  89 37
HC662_RS05435 1117014 .. 1117034 +  -9.7   -4.1822   TTCATTAATAAGAAA            GAGCTTGCG GTG TGCAGGCTC            TTTCTTCACATAAAC  85 33
HC662_RS05440 NONE
HC662_RS05445 1119360 .. 1119375 + -11.8   -5.4505   AAAATAATCCCAAAA              CCCGCC AACA GGCGGG               TTTTTTATTAAAAGC 100 34
HC662_RS05450 1120356 .. 1120384 + -11.1  -5.00196   CTGCTTTGGATGCTG        CATCCTCTTTCTT CTT GAGAAAGAGGAAG        TTTTATTATTTCCGC  93 8
HC662_RS05455 NONE
        glpP 1122574 .. 1122584 +  -4.6  -4.46576   TAAATGTTTATGCAC                 CCGT AAA GCGG                 TTTGTTGTGGTTTTT  66 123
        glpF NONE
        glpK 1125044 .. 1125092 + -21.4  -5.19879   GTCCTGAGATGAGGA GAGACCACAGCA-CCAAAGTGTA AGCA TGCACTTTGGCTGTTGTGGTCTC TTTTTCTATTTACAC 100 81
        pgcA 1128685 .. 1128709 + -13.7  -5.86976   ATAGTTCAAGCATAA          GCTGGATCATT GTA AATGATCCGGC          TTTTTTCTTTTCTCA 100 37
HC662_RS05485 1129960 .. 1129971 +    -3  -2.72661   AAAGGAAGGACAGTG                CAAT GAAA ATTG                 TAATTGCGGATGATC  41 20
HC662_RS05490 NONE
HC662_RS05495 1131118 .. 1131139 + -15.9  -4.62441   CGCAAAAGCAGGAAA           TCCCGGCGT CTGA ACGCCGGGA            TTTGTTTATGTGAGC 100 13
HC662_RS05505 1131920 .. 1131944 +  -4.2  -4.55887   GCTCTAAGTAAAAAA          CTGTACAGCC GCTAA GGCCATACAG          TTTCTGTTTTTAGAA  68 34
       spoVR 1137204 .. 1137227 + -15.4  -6.11229   GTACCTTTAAAAAAA          GAGGATGCAG CGTT CTGCATCCTC           TTTTTTTATTTTCCT 100 31
HC662_RS05535 1140174 .. 1140191 + -11.3  -5.95166   AATTTTAGAAGGAAA             CCCGTTC ATTG GAACGGG              TTTTTTTTCATTAGA 100 39
HC662_RS05545 NONE
HC662_RS05550 1143273 .. 1143288 +    -9    -5.626   TAATGAAACGAAAAA              CCAGCA TGAT TGCTGG               TTTTTTTGTGCAGTA 100 38
        bcaP 1144926 .. 1144950 + -12.9  -4.00463   TAATCTTGTGATTAA          GAGAGCGGC CATACAT GCCGCTCTC          TCTTTTATGTTCTTG 100 38
HC662_RS05560 1146394 .. 1146415 + -15.9  -4.86731   TATCATTTTAAACAA           CAGGCTCCG TTCC CGGAGCCTG            TTTTGTTTAACAAGA 100 30
HC662_RS05570 1148378 .. 1148395 + -11.3  -4.64861   AGTGTAATGAAAAAA             GACGCCT CTTC AGGCGTC              TTTCTTTTAAAAGCC  90 34
HC662_RS05590 1151435 .. 1151454 +   -10   -4.7416   GGAAATATAACAAAA            GCTGAGGG CGAA TCCTCAGC             TTTTTCGCGTTTTAA  91 31
HC662_RS05595 NONE
HC662_RS05600 1153375 .. 1153403 + -16.1  -4.97461   TATGATATAAAAAAA        GCAGCAGAAGTTC ATT GAACATCTGCTGC        TTTTTGGTGTTTATT 100 8
HC662_RS05620 1157653 .. 1157677 +  -7.9  -5.27779   GAAAACAAAGAAAAA          GAAAACGGCTT TGA ATGCTGTTTTC          TTTTTTCATATTCAC 100 41
HC662_RS05625 1159301 .. 1159325 +  -7.2  -5.44119   TGCTGAACAGTGCAA          CCTTGAGC GAGAAATAA GCTCAAGG          TTTTTTTACGCTGCG  91 9
HC662_RS05645 1161182 .. 1161201 + -16.4  -5.14563   TGAATTGAGAAATGG            CCCCGGCG TTAA CGCCGGGG             TTTTTTGCTGCAAAA 100 69
        mscY 1162415 .. 1162439 +  -8.6  -4.77036   GCTTAAAAAGGGGAA          GACTTCGTCT GACAG AGGCGGAGTC          TTTTTCATGGTAAAA  88 35
HC662_RS05655 1163219 .. 1163243 + -10.8  -5.84381   TTTGGGCATAAAAAA         GTGAGGCCGCA CTTA TGCG-CCTCAC          TTTTTTTATTCGTGA 100 22
         dat 1165247 .. 1165270 + -11.8  -5.75538   TGAAGCATAAAAAAA          GAGC-CCGCTT TGC AAGCGGCGCTC          TTTTTATTTTTTAAC 100 41
HC662_RS05680 NONE
        bmrC NONE
        bmrD 1171492 .. 1171513 + -11.7  -5.06505   CATAACGCTCAAAAA           CCCAAAACA ATCG TGTTTTGGG            TTTTTATATGTACTT 100 36
HC662_RS05725 1177122 .. 1177135 +  -3.1  -3.51785   GCAATGATGAAAGGA               GCTAT TCCA ATGGC                TGTTAATTTTTATGA  49 108
HC662_RS05730 1177494 .. 1177515 + -11.7  -5.80727   GGCTAAACAGCAAAA           TCCCTTCTT GGAA AAGAAGGGA            TTTTTTATTCTTTTT 100 35
HC662_RS05740 1179966 .. 1179994 + -11.7  -5.03145   ACGTGTGTAAAAAAA       GCCGCTCGCGCC CTCACA GGTGCG-GCGGC        TTTTTTGCCGGATTG 100 31
HC662_RS05745 1181569 .. 1181590 + -14.5  -5.65177   TGAGCAAACGACAAA           GCAGCACTG ATCA CAGTGCTGC            TTTTTTTATCCCTGT 100 16
HC662_RS05765 1184654 .. 1184696 + -12.3  -2.54896   AAGTGTAACAGATCA GCCGGAAAGCTGATCATCTGT GAA ACAAA--ATCAGCTTTCCGGC TGCATTGACTAAACG  85 33
HC662_RS05775 NONE
HC662_RS05780 1187137 .. 1187158 + -12.3  -4.67607   AAACTGATTGGAAAA           CAGCCTGGG GATT CTCAGGCTG            TTTCTTTATTGACAG 100 34
HC662_RS05785 NONE
HC662_RS05790 1191385 .. 1191403 +  -2.4  -3.32698   TTCTATAGCTGTAAA             TCGGTATG TGA TATACTGG             TATTATGTAAGATAC  45 47
        yhaM 1192390 .. 1192419 + -13.1  -4.76644   CAAATAATTAATTAA       GGACTGATGCTGAA ACA TTCAG-ATCAGTCC       TTTTTGCTGCGTCTT 100 34
        yhaL 1192724 .. 1192751 +   -15  -6.01369   TATTGCATAAAAAAA        GCTGTGCA-GCTC AAT GAGCGTGCACAGC        TTTTTTTATTATTTA 100 31
       yhzE1 1193891 .. 1193915 + -10.8  -4.08485   TACTAAGCAGCCCGG          GGATCGCTTG CACGA TAAGCGATCC          TTTAATTTCACTAGC  86 35
       yhzE2 1194105 .. 1194131 + -19.6  -5.32699   TAATCAAACAAAAAA         GCATAGCTGCTG AAA CAGCAGCTATGC         TTTTTTCATATTTAC 100 38
HC662_RS05830 1195636 .. 1195651 +  -6.8  -2.79302   TTTCCATAAAATCAT              CGCCGT AGAT ATGGCG               TATCATACACATCAT  56 162
HC662_RS05845 1196998 .. 1197019 + -10.1  -4.18762   TCTTTGTCGAAAAAA           CCTCTCCCG GCAG CGGAAGAGG            TTTTGGGTGACAATT  85 63
        ecsA NONE
        ecsB NONE
HC662_RS05875 1202509 .. 1202534 + -11.9  -5.26918   GAATAGTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTATAGCATAT 100 12
HC662_RS05900 NONE
        hemE 1209582 .. 1209594 +  -4.9  -2.63479   AAGCATATCTTTTGG                TATCA TGA TGATA                TCCTGTCAAAATGTT  49 39
        hemH NONE
        hemY 1212003 .. 1212022 +  -5.6  -6.17268   TTATTCAGTTAAAAA            CCTCCACT GTAT GGCGGAGG             TTTTTTTTATTGTGC 100 29
HC662_RS05920 1212706 .. 1212730 +  -4.4  -4.32857   TTGTATGTTGTCAAA         GGATTGTC-AG CTAA CTAGATAATCC          TTTCTCTTTGCAAGA  64 8
HC662_RS05925 1215129 .. 1215154 + -13.5  -5.83226   CTTCATAATGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTATTACATT 100 33
HC662_RS05935 1217176 .. 1217191 +  -6.2   -5.3798   GTGTTTTTTACAAGA              GAAACA ATGG TGTTTC               TTTTTCTTCTTCTTC  89 155
HC662_RS05945 NONE
HC662_RS05950 1218928 .. 1218953 + -17.6   -4.4078   TTAAAGATTAAAAAA         GCCTGCGGGG CAAGAA CCCCGCAGGC          TTTTCATTAACCGGA 100 30
HC662_RS05965 1221547 .. 1221557 +  -2.4  -2.77135   TGTGGGAAGGATAAA                 GGAG GAG CACC                 ATGTTATTTATAGAC  41 27
HC662_RS05970 NONE
HC662_RS05975 1223271 .. 1223296 +    -4  -5.90231   CTATAACAGTACGGA         CACTC-GGGGC TTTTT GCTCTTGAGTG         TTTTTTTCTGTTTCT  93 35
        lcfB 1224924 .. 1224957 +   -17  -4.84363   TTTGCCTCAATAATA     TGAAAAAGCGAAGC GGCGGA GCTTCGCTTTTTCA      TTTTTAATCCTTTGC 100 28
HC662_RS05990 1226802 .. 1226827 +  -9.1  -5.86465   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTTTCTATTATT 100 29
HC662_RS06000 NONE
HC662_RS06005 1229949 .. 1229980 +   -14  -5.66926   GCTTTAACAGGCCCA      GCTTGCAGAGAAAAC TAT GTTTT-TCTGCAAGC      TTTTGTTTTTTTTAA 100 34
HC662_RS06010 1231430 .. 1231447 + -11.3  -5.39905   AGAAATAAAAGAAAA             GACAGGC GAAT GCCTGTC              TTTTTCTTATTTGAT 100 33
HC662_RS06045 1239285 .. 1239304 + -12.2  -3.71888   AATGGGTAATAAAAA            GCCAATCC TTGA GGATTGGC             TTATTCGCTCTGCTT  90 32
        comK 1240420 .. 1240444 + -11.4  -3.49924   ATTAGAAAATAGAAA          GGAGCTGACC GAACA GGGCAGCTCC          TTCTCCTGCTTTAGG  85 36
HC662_RS06065 1241841 .. 1241861 +  -9.8  -5.73339   GCTAAACAAGAAAAA            GCAATCTG ATGTC CAGATTGC            TTTTTTTATGCTTAT 100 36
HC662_RS06085 NONE
        lepB 1245409 .. 1245429 +  -9.7  -5.67967   GATGCTGAACAAAAA            GACGCCAAT TGA ATCGGCGTC            TTTTTTTGTGCTGGT 100 14
HC662_RS06095 1247087 .. 1247097 +    -4  -3.88498   CAGCCGGGTGTAAGG                 CAAT TCG ATTG                 TTTCATCTGTAACAA  57 28
HC662_RS06100 1247693 .. 1247710 + -11.3  -4.27796   TTTTTAAATAAAAAA             CACGCAC TGAG GTGCGTG              TTTTCACGTTTCTTC  88 30
HC662_RS06120 1252252 .. 1252273 + -10.2  -3.08467   TGTCCAAATGAAAAA           GAGGGTTC TTTTTT GAACCCTC            TCTGTCCTTTATGAC  76 30
        addB NONE
        addA 1260542 .. 1260583 +  -2.1  -4.52589   ATTCTGACACTATAG CGAGATCCGTAAGCTCCGA GAAT TCAGACGGAGCGGATCTCG  TTTTCTATACAAAAG  59 26
HC662_RS06145 NONE
HC662_RS06150 NONE
        hlpB 1265501 .. 1265527 +  -8.8  -4.51196   AAAAATGACCAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCATTTCCA  84 33
HC662_RS06200 1270192 .. 1270213 +  -4.3  -5.29782   GCTGAAACAAACAGG           AGGGCGG ACTCGGAC CCGCCCG            TTTTTTCTGAGTCTA  79 36
HC662_RS06205 1270667 .. 1270689 +   -12    -5.186   ATAGAAAAACGCGAA           CCCGTCTCTA TGA TAGAGTCGGG           TTTTTGTATATTTTC 100 40
        wprA 1273510 .. 1273529 + -10.7  -5.95539   AAAAGTAATCAAAAA            GCGGTGC CTAGCT GCACCGC             TTTTTTTATTTGCGC 100 33
        asnB 1276114 .. 1276138 +  -7.9  -5.16841   AGGGATAAAGAAAAA          GCCGATTCT GCGCAAA GGAATCGGC          TTTTTCTTCATATAC  89 33
HC662_RS06225 1277024 .. 1277043 +  -7.8  -3.03243   GACATATAAAAAACA            CCCGGC CTTATTGA GCCGGG             TGTTACGCCATACCT  64 32
HC662_RS06235 NONE
        degA 1280430 .. 1280451 +  -9.4  -4.67038   CACCACTCAAAACAT           GAGCCCGC AAATGA GCGGGTTC            TTTTCGTTTTGACAG  88 24
        iolX 1281720 .. 1281741 + -11.6  -4.34859   TTCTTATCAAAAAAA           GCAAGGGC AGTTTA GCCCTTGC            TTTCTCTCTTTTCAT  93 77
HC662_RS06260 1284516 .. 1284533 +  -4.8  -4.12942   CCCTGGCGAAAGCAA             TCGCGT GCTCCG GCGCGA              TTTTGCAGCCTTTCA  64 71
HC662_RS06270 1286118 .. 1286167 + -13.1  -4.08317   GATTGCACAGTTTGC GGGAACATGAGAAAAAACCCGAT ATTG ATCGGGTTTTTTTATATGATTCC TTTGCTTTGCAGTTC 100 16
HC662_RS06290 1289606 .. 1289616 +    -4  -2.55361   CAACGATAGAGAGGG                 TCAT GAT ATGA                 ATGATTTTTCACTAG  44 15
HC662_RS06295 1290382 .. 1290412 +  -8.3  -2.96205   TGTAAAACAGCGGCT      GCGG-GGCTCTCGT CGTA AAGAGAGCCTCTGC       CTATTATTTTTTATG  67 36
HC662_RS06335 1298684 .. 1298729 + -18.6  -2.78298   CGAGAAAAAATAGCA TGGAAAAGGCTCGC-CTGCAG CAGGA CTGCAGAGCGAGCCTTTTTTA GTTCTAGTTTAATTC 100 28
HC662_RS06355 NONE
HC662_RS06360 NONE
HC662_RS06365 1302192 .. 1302221 + -13.7   -5.0133   AGTAGAGTAGAAAAA       GAAGGGCAGAG TGAAATAT CTCTGCCCTTC        TTTTTTGGGAAAATA 100 31
        nprB 1303936 .. 1303988 + -21.9  -4.63218   GCTGTCGGAATTCAA TAAGCAAACAAAAACAGTCAGGAC ATATGA GTC-TGACTGTTTTTGTTTGCTTA TTTTCTTAAAAAGAA 100 23
HC662_RS06380 1305844 .. 1305872 +  -2.1  -4.26903   GGAAGTCGTGAAACG        GCTGCTTGTGCTG CTC CTGCCCGTGCTGC        TTTTGATAGGCTGCG  57 52
HC662_RS06385 1306294 .. 1306316 + -17.8  -5.80364   TGAAGTCAAATAAGA           GGCTATGGCG AAT CGCCATAGCC           TTTTTTTATTGAAGT 100 28
HC662_RS06405 1308467 .. 1308481 +  -2.8   -2.6563   TGAATGGTTTGATAC               GTACTT ATA AAGCAC               TAAGTTATTAACAAG  41 16
HC662_RS06410 1308865 .. 1308888 +  -9.6  -5.03314   AACAAAACAAAAGAG          GACAGCCTGA CATG TGAGGCTGTC           TTTTTTACAGCTGAA  91 41
HC662_RS06415 NONE
HC662_RS06420 NONE
HC662_RS06425 1311113 .. 1311133 + -15.5  -5.63504   TAATGATGATGAAAA            CAGGCTGAC GCG GTCAGCCTG            TTTTTTTATGCGATT 100 18
HC662_RS06430 1312520 .. 1312540 +  -2.4  -3.85698   TCATTATCAGCGAGA            CACCGGCA GTAAG TGCCGCAG            TTTATACCCAAAGCC  50 178
        argB 1314386 .. 1314402 +  -5.1  -3.91716   GTCAAAGCAAAGGAG              GCTGTTT CAT GAGCAGC              TTATTTCAAACCTAC  61 14
HC662_RS06445 1315571 .. 1315590 +  -5.2  -2.73203   TTTTCGATATGAAAG            TATAAAAA TTCA TTTTTATA             ATTAATTATTCATCA  50 45
HC662_RS06450 NONE
HC662_RS06455 NONE
        argF 1320710 .. 1320730 + -11.2  -5.52384   GAATAATCAAAAAAA            CTGCTGAG CCGCA CTCAGCAG            TTTTTTTGATGGCAA 100 35
HC662_RS06465 1320993 .. 1321016 +  -9.7  -4.88222   GTGATCAAGAAAAAA          CCCAAAACA ATGAAA TGTTTTGGG           TTTTTGGCTTTTAAT  93 37
HC662_RS06475 1322214 .. 1322237 +  -8.8  -4.54727   AGAATACAATAACAA          CAGCCTTCTC TTTT GCGGAGGCTG           TTTTGCTTTGGGAAA  86 41
HC662_RS06480 1322925 .. 1322940 +  -3.2  -3.48981   AAAGGAGTTGAACAT              GACTTG ATCA CAAGGC               TTGTCATGATCTTTT  49 113
         med NONE
HC662_RS06490 1324094 .. 1324113 + -10.8  -4.18697   ACCGAATAAGAAAAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  86 32
        fabH NONE
        fabF 1326722 .. 1326746 + -17.9  -6.22802   CATAATCGCGCCAAA          CCGGCTGCCCT TAA AGGGTAGCCGG          TTTTTTTTTGTGCGC 100 36
HC662_RS06510 NONE
        appD 1329044 .. 1329070 +    -3  -2.60496   TGTCCGCAAAAATAT         TCAAATGGTTTT CCA AGACCCATTTGC         CTCTTTGAACCCAAG  41 320
HC662_RS06525 1331468 .. 1331492 +   -10  -3.84451   AAATTTTCCCTTGCA          GGGGAGGGAG CGCGT TTCCTTCCCC          TTTGAATTTGAAAAA  81 39
HC662_RS06530 NONE
        appC 1333455 .. 1333494 +  -6.1   -5.1286   GAAAACAGAAGAAAA GCAGATCTCTTTTTGTCAGA AAA TCT-ACA-AA-GAGATCTGC TTTTTGTGATTTTTA  80 72
HC662_RS06540 1334372 .. 1334391 +  -9.3  -5.52384   GTAAACTGAAAAAAA            CCGCTCT TTGCAT AGAGCGG             TTTTTTTGATCAGCG 100 32
        oppA 1337801 .. 1337829 + -12.6   -4.2704   AAACAAAAACCTCAA        GGTATATGGGGA CCTAT TTCCCATATACC        TTTCTTACTGATGAG 100 54
        oppB NONE
        oppC NONE
        oppD NONE
        oppF 1341744 .. 1341769 + -11.3  -5.47399   CTCATGATTCATCAA         TCCTTCAAGAT AAAT GTCTTGAAGGA          TTTTTTTGCGCTTAC 100 34
HC662_RS06575 1343051 .. 1343063 +  -4.8  -4.67011   AAGCGGGAAAGCTGA                GCTC AATGA GAGC                TTTTTGCATACGCTT  70 26
HC662_RS06580 1343894 .. 1343919 +  -2.1  -3.93769   CTGTTCACACTTACT         TTTTTATAG-TA TAA TACCTATAAAGA         TTCCTTTTTTAGAGT  52 107
         spx 1344402 .. 1344433 + -13.2  -4.60487   AATAGATCGTATCAT      CAAAAGAAGGCTGA GTCA TCAGCCTTCTTTTA       TTTTTCAACCTGCTG 100 39
HC662_RS06595 NONE
        mecA 1346026 .. 1346047 +  -9.5  -5.94713   TGCATCATAGCAAAG           CCGATTTCT TTCC GGAAATCGG            TTTTTTTTATGCGCT 100 31
HC662_RS06605 1347416 .. 1347428 +  -4.8  -3.56056   TTTTCGTGTTTTTAC                TGCC TTTTT GGCA                TTCATTCTCTTCATT  57 110
        pepF 1349400 .. 1349424 + -11.5  -5.01732   TCTTAAAAAAAGAAA          GCCTGTGCA GAAATGA TGCACAGGC          TTTTTTAAAACCCTT 100 35
HC662_RS06640 NONE
        yjbM NONE
HC662_RS06650 NONE
HC662_RS06655 1355646 .. 1355690 + -14.6  -4.12902   TCAAGATATGAAAGA ACTGACAAAATCCTAAAACG GTTTA CGTTTTAGGATTTTGTCATC TTTTCAGCATGATTG 100 10
HC662_RS06665 1358905 .. 1358928 + -11.8  -6.20267   TATGCCAATTCCAAA          CCACTTTTCC TTGC GGGAAAGTGG           TTTTTTTATTTTTCA 100 221
        tenA NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG 1362302 .. 1362316 +  -6.4  -2.87132   AACGGCAAGCAGTCC               GGGAGA AGG TCTTCC               TGTATGACGGACAGG  57 4
HC662_RS06695 NONE
        thiD 1364163 .. 1364187 +   -13  -3.73107   TAAATACAAGCCGAT          GAGATCACCA GCTGA TGGTGATCTC          TTTCGCGTTTGCTAC  95 24
        fabI 1365093 .. 1365114 + -10.2  -5.82036   CAGGATCTATGCCAA           GCAATCCC GAAACA GGGATTGC            TTTTTTATTTCTTCT 100 42
HC662_RS06710 1365875 .. 1365901 +  -8.6  -5.08824   AATGAAATGAAAAAA         GCTGCCCGGCAG ATG TTCCCGGACAGC         TTTTTTACATAGAGA  91 39
        yjcA 1369244 .. 1369272 +  -9.8  -5.40072   GCCTCAATAGCCTGG       CAAAGAAACCGGA GACC TCCGGTTT-TTTG        TTTTTTTAACGGAGC 100 224
HC662_RS06745 NONE
        yjcZ 1369784 .. 1369811 + -15.7  -3.29147   CTAAGGTTTATTGAG        GGAAGTACGGG TGATGT CCCGTACTTCC         TTGCCTTGTGTTCAA 100 37
      spoVIF 1370166 .. 1370192 +  -5.9  -5.75822   AATAAATAAGCAGAG        GGCCTGGCTG ACTCAATG CAGC-AGGCC         TTTTTTTACTTTATA 100 32
HC662_RS06765 1372892 .. 1372912 +  -6.8   -5.4251   GATATGTATAAAAAA            CCGTTCAC ATCCA GAGAACGG            TTTTTTATATGTGGA  89 30
        metI NONE
        metC 1377311 .. 1377333 + -10.6  -4.92757   CGGTCCGTTAAAAAA           GAAGCCGG CGATAGC CCGGCTTC           TTTTGTTATTCATCA  93 30
HC662_RS06805 1379397 .. 1379413 + -12.3  -5.41359   GAATCATAGCTTAAA              CCCTTGC ATA GCAAGGG              TTTTTTACTTTGCTT 100 33
HC662_RS06820 1381132 .. 1381155 +  -6.6  -2.79276   TTATTGGAAAATAAA          GAAGAAGGGG AATC CCCCTCCATC           TAATTAATCCATCCT  57 49
HC662_RS06845 1385343 .. 1385353 +  -2.6  -3.55122   ATCAGAAAAAAGTAC                 TTTA TTA TAAA                 TTCCTTTCCATGGTA  49 446
HC662_RS06855 1386333 .. 1386345 +  -4.9  -4.12902   TGATATTCTTTTGTC                TTTGT TCG ACAAA                TTTTGCGAATGGTTC  63 38
HC662_RS06860 1386708 .. 1386724 + -10.1  -5.80817   GATTAAATAGCATGG              GCATCCC TTG GGGGTGC              TTTTTTTGTCTTACG 100 80
HC662_RS06905 NONE
HC662_RS06910 1392872 .. 1392893 +  -5.7  -4.68593   CCCTCGCCCAAAAAA           GCCCTTCTC ATAT GAGTTGGGC            TTTTTAAATAATCCA  72 81
HC662_RS06920 1395495 .. 1395532 + -12.1  -3.66398   ATGTTCATAACTGAT   GGCTGCCATTGAACA CATTGAAA TGTTCTGTGGCAGCC    TGTTTATATATAACT  90 102
HC662_RS06925 NONE
HC662_RS06930 1397407 .. 1397439 +  -9.4  -4.78107   AAATGAATGAAAAAA     GTTTGGCTC-AAAAT ATAA ATTTTCGAGCCAAGC      TTTTTGGTGATGGTA  90 126
HC662_RS06940 1398505 .. 1398537 +  -5.6   -5.4833   CGGAATCATACACGG      CGGTTAGAGGCGTT ATATC AACGTTTCTAGCCA      TTTTTTATTGCGTGA  83 252
HC662_RS06945 1400773 .. 1400791 +  -6.7  -6.02919   TTTGGATTATTAAAA             GCAGGGA TTCAT TCCTTGC             TTTTTTTGTTTATAG 100 28
        manP NONE
        manA 1403921 .. 1403939 +  -3.8  -5.63103   CTGAATATGGAAAAA             CCCTTC TCATATT GGAGGG             TTTTTTTGATTAAAA  83 111
HC662_RS06960 1404779 .. 1404802 +  -5.9  -4.76423   TTGTTTGAAGAAAAA          CCCGCTCTC AGTTTA GGGAGAGGG           TTTTATCTCTTTCTA  77 57
HC662_RS06965 1405649 .. 1405665 +  -9.4  -5.15969   GCAAATAAGTTAAAA              GCAGGC ATAGA GCCTGC              TTTTTTACATTGAAA  91 33
        ybaK 1407626 .. 1407646 +  -5.4  -4.61633   ATAGTAAATAAAAAA            GCTTAGAC ACCTA GACTAAGC            TTTTTCCGCATCTCT  72 41
HC662_RS07015 1413381 .. 1413399 +  -6.6   -4.8622   TTCCAAATGAAAAAA             GCGTCACA TAT TGCGGCGC             TTTTTGATTCCCAGA  81 31
        fdhF NONE
HC662_RS07035 1418124 .. 1418149 + -12.5  -5.14563   GAGATTAACCACCCG         CCCGAGTAGGC TGCT GCCAGCTCGGG          TTTTTTGATAGAAAG 100 33
HC662_RS07040 1418973 .. 1418999 +  -6.6  -5.60993   AGCTAATTTACAGTT         GCGCGTTTTC ATCAGTG GGAAACGTGC         TTTTTTTATAGCGAA  90 42
HC662_RS07045 1419666 .. 1419688 + -12.1  -4.30719   ATTTGACTAAAAAAA           GAAAGAGCC AGGAA GGCTCTTTC           TTTGTTATAGCGCAA  95 31
        yjiB NONE
HC662_RS07060 1422747 .. 1422800 + -12.1  -5.86061   AAATCCGCTGTACCT CAATAAGTCAAAAAAACCGAAATCA AGAT TGATTTCGGTTTTTTTGATTAAATA TTTTTTTTCATCCCA 100 20
HC662_RS07070 1423978 .. 1424000 + -17.8  -4.52589   TAACTCTTACAAAAA           GCCGCTTTCC AAG GGAAAGCGGC           TTTTGTATGCCGGCA 100 38
HC662_RS07080 NONE
HC662_RS07085 NONE
HC662_RS07090 NONE
HC662_RS07095 NONE
HC662_RS07100 NONE
HC662_RS07105 1430814 .. 1430845 + -19.6   -4.1523   TAGGTGTGAAATAAA      GATGAGCCCTTCCT TTTC GGGAAGGGCTCATC       TTTCTGTGTCATCCA 100 27
HC662_RS07125 1434267 .. 1434279 +    -2  -4.52502   GAGAGTAAAGGATTT                TTGA CTTAT TCAA                TTGTTTATTTTTGAG  59 211
HC662_RS07130 NONE
HC662_RS07135 1436130 .. 1436174 + -13.8  -5.77856   CCTTTTTTGGACTCG GACATTGCC-AAAAGCGTTCC TTTC GGGATGCTTTCCGGCAATGTC TTTTTTTCGTTTGTT 100 42
        uxaC NONE
HC662_RS07145 1439548 .. 1439559 +  -2.2   -3.5393   GACCGGGGTGCTCGA                TGGT GATG ACCG                 TTTCGGCCACGTGAT  46 377
HC662_RS07155 NONE
        uxuA NONE
HC662_RS07165 NONE
HC662_RS07170 NONE
HC662_RS07175 1445680 .. 1445700 +    -4  -4.06419   CAATTGACGCCGTGA           TGCCCCGTT TTTC AGCGGG-CA            TTCTTTATACAGAAA  59 26
HC662_RS07180 NONE
HC662_RS07185 1448690 .. 1448726 + -23.3  -3.07994   GGTGTAACGTTATAA    TGAAGAAGGCTATCCTC CGA GGGGATAGCCTTCTTCA    TTAAATCAGCTTCAA 100 26
        rapA NONE
        phrA 1451678 .. 1451691 +  -8.1  -5.64421   ATAAAGAGAAAAAAA               GACCC TCCG GGGTC                TTTTTTATTTCAGCT 100 37
HC662_RS07215 1453035 .. 1453054 +  -9.3  -4.43681   GCTGTAATCAATAAA            CGGAAGC TGCCCC GCTTCCG             TTTTCATCTTACATA  86 34
HC662_RS07225 NONE
HC662_RS07230 1455068 .. 1455094 + -10.8  -4.74132   TATTAAAATCTATGC         CGGGCTGAGG CAAATGT CCCCAGCCCG         TTTTTAATCAGCTGT  91 35
HC662_RS07245 NONE
HC662_RS07250 NONE
HC662_RS07255 NONE
HC662_RS07260 NONE
HC662_RS07265 NONE
        xtrA 1458918 .. 1458963 + -19.3   -5.4505   AAGACGGAAAGCCTG CGGACACTGATCAACTGCACAG CAT TTGTGC-GTTGATTGGTGTCCG TTTTTTATTGCCAAA 100 61
HC662_RS07275 1459557 .. 1459577 + -10.4  -4.42386   GAGCATGACACATAA            GCGGCTGG CAAGA TCAGCCGC            TTTTATGAATAGACA  89 76
HC662_RS07280 NONE
HC662_RS07285 NONE
HC662_RS07290 NONE
HC662_RS07295 NONE
HC662_RS07300 NONE
HC662_RS07305 NONE
HC662_RS07310 NONE
HC662_RS07315 NONE
HC662_RS07320 NONE
HC662_RS07325 NONE
HC662_RS07330 NONE
HC662_RS07335 1468799 .. 1468821 +   -15  -5.02074   TGAACAAGCCATACG           CAGACCTTTC TCA GAAAGGTCTG           TTTTTTACACGATGA 100 48
HC662_RS07340 NONE
HC662_RS07345 NONE
HC662_RS07350 NONE
HC662_RS07355 NONE
HC662_RS07360 NONE
HC662_RS07365 1475292 .. 1475311 +  -3.5  -5.33026   TAAAGTATAGACAAA            CCGCTTC AGCCAC GAAGGGG             TTTTTATTTAGCTTG  75 31
HC662_RS07370 NONE
HC662_RS07375 NONE
HC662_RS07380 1477357 .. 1477368 +  -2.2  -3.51708   CCTTAACAACAATGA                GGTG GTTT TACC                 TTGATTTCAACCATA  46 10
HC662_RS07385 NONE
HC662_RS07390 NONE
HC662_RS07395 NONE
HC662_RS07400 NONE
HC662_RS07405 NONE
HC662_RS07410 NONE
HC662_RS07415 NONE
HC662_RS07420 1482658 .. 1482686 + -10.3  -5.29445   CTGATCACAGAACAC        AAAAATCCCGGAG CTG CTCCGGGATTTAC        TTTTTCTTCTTCAAC 100 37
HC662_RS07455 1488506 .. 1488528 + -19.2  -5.80364   AATTTTAATTCATTT           GCCTTCCGGC GCC GCCGGAAGGC           TTTTTTTATTACCAT 100 40
HC662_RS07460 NONE
HC662_RS07465 NONE
HC662_RS07470 1491923 .. 1491945 + -19.2   -5.5208   TGTCATAACCTGAGA           CCCCTGTCCG TTA CGGACAGGGG           TTTTTTATATTCTGC 100 33
HC662_RS07480 1494771 .. 1494790 +  -7.2  -5.37345   CAGAGAAACAGAAAT            GAATCCTT GAAA GAGGATTC             TTTTTTATCATTGAA  91 24
        dppA 1495703 .. 1495714 +  -4.4  -2.64099   CATGACTGAGCTTGC                GATG CGGA CATC                 ATTCTGCTAAAGGGG  47 4
        dppB NONE
        dppC NONE
        dppD NONE
        dppE 1500318 .. 1500345 +  -7.8   -5.5762   CGGCCATTAAGAAAA        TACTGCTTCTTT ATGC GAAGGAGCGGTA         TTTTTTCTCTTTCCT 100 44
HC662_RS07510 NONE
HC662_RS07515 NONE
HC662_RS07520 NONE
HC662_RS07525 1504341 .. 1504360 + -12.2  -4.29391   GAGATAAACAAAAAA            GACTGGCT CCGG AGCCAGTC             TTTGCTTTTATGATT  95 34
HC662_RS07540 1507084 .. 1507104 + -12.7  -6.00086   TTGGTAATCGTTAAA            CCCAAAACA TGT TGTTTTGGG            TTTTTTTTGTGCTGT 100 34
        hmpA 1508530 .. 1508561 + -13.3  -3.65046   GTTTGAACACATACA      TAAAACTCTTCTC CTTTCT GAGAAGAGTTTTA       TTATTGAGATAGAAG 100 35
HC662_RS07555 1509721 .. 1509742 +    -3  -6.04324   ATAACAATTGAGATT           GCTCTC TATTTTTAAC GAGAGC            TTTTTTCTTTTTTAA 100 30
HC662_RS07560 NONE
HC662_RS07565 1510976 .. 1511014 +  -6.7  -6.09196   ACGGAGGGAAAAAAG  CCCGGGAGAGTCAATCTC ATGT GAGAC-GACTGTCCGGGG   TTTTTTTGTTTTCGG 100 161
        ykkC NONE
        ykkD 1511722 .. 1511736 +  -2.9  -3.14647   ATTCTGTCATAAATT               GATTT TTATC AAATC               TTCAGTATAATGGAT  44 29
        purU 1512699 .. 1512719 +   -14  -4.72272   TTAACTAGACGGCAA            GAGCCCGC GCCAA GCGGGCTC            TTTTTGATGACAAAA 100 33
HC662_RS07585 1514125 .. 1514135 +  -5.4  -2.72511   GGTGATCCACAGGAA                 TGAC TGG GTCA                 ATTTAAAAGACTAGG  51 1
        proA 1515431 .. 1515453 +  -8.5  -5.93809   ATGTTCGATGAAAAA           GCTTATCTC GTAAA GGGATAAGC           TTTTTTTTATGCGCC 100 48
HC662_RS07595 1515972 .. 1515999 +  -9.9  -2.80472   CTGAATAAAATATTA        AGAGGATGCCT CGTATA AGGCATCCTCA         ACTTTTTTGATGAAG  74 33
HC662_RS07605 1517000 .. 1517021 + -13.1  -5.60993   TAAAATAATGACCGG           CATCCTGAG GGTT CTCAGGATG            TTTTTTTGTGCGGAA 100 33
HC662_RS07610 1518199 .. 1518223 + -11.5  -4.52347   CACCGAATTAACAAA          GGATCAGGC CGCACAT GCCTGATCC          TTTTAATATTCTTTC 100 4
HC662_RS07620 1519468 .. 1519488 + -15.5  -4.31166   TTTTAATAGAAAAAA            CCATCTGCC GAA GGCAGATGG            TTTCTATATTTATAC 100 35
       rsbRB 1524225 .. 1524245 + -11.2  -4.82901   TCAATAAGAAAAAAA            GCCGCTAT CGACA ATAGCGGC            TTTTTATGAGGAAAA  91 34
        ykoG NONE
        ykoH NONE
HC662_RS07670 NONE
HC662_RS07675 1531483 .. 1531498 + -11.8   -5.1861   GACGACTAATCAAAA              CCCCGC TAGA GCGGGG               TTTTTTCATGATAAG 100 32
HC662_RS07680 1531688 .. 1531715 + -11.4  -3.27121   ATGAGACGCAAACAA        CAGAATAAGGGC TTAG GCCCTTGTTTTG         TTCCGTATTTGTGAT  84 18
        mgtE 1533565 .. 1533588 +  -8.1  -4.61566   TTATAAAAGTAAAAA          GTCCGTCTC AATTGC GAGTCGGAC           TTTTATCATTTAACG  86 35
HC662_RS07695 NONE
HC662_RS07700 1534534 .. 1534559 +  -9.2  -5.72207   AAATCACAAAAAATA         TCCTTATACA AGATAA TGTATAAGGA          TTTTTTTGCTTTCAG 100 10
HC662_RS07705 1535154 .. 1535175 +  -8.1  -6.37666   TTCGTTAACATGTTA           CACTCT-CTG TTT CAGGAGAGTG           TTTTTTTTGTTTTAT 100 33
HC662_RS07715 1536919 .. 1536943 +  -2.2  -5.35354   ACCTATCAAAAAAAA         GACTGATGC CTTGGTCA GCA-CAGTC          TTTTTTGATTATATC  75 20
HC662_RS07725 NONE
HC662_RS07730 1540689 .. 1540711 + -12.1  -4.84359   ACAGTTGAACGGAAA           GAGCTGACT TAATT AGTCAGCTC           TTTTTCTGCAACTGA 100 33
HC662_RS07750 1546780 .. 1546790 +  -2.4   -2.9175   GCGTTGACAAATAAT                 CGCG CTG CGCA                 TATCATTGACGTATA  42 34
HC662_RS07755 1547833 .. 1547855 +   -15  -4.49756   GGGCGTAATCTTAAA           GACTCTGCTT GAA AAGCAGAGTC           TTTTCATGTTTAAAA 100 33
        sigI NONE
HC662_RS07765 1550295 .. 1550311 + -10.8  -2.64243   GGAGAATAAGAAAAC              CCCGGC CTTTA GCCGGG              TACTATAGAATGTCA  78 333
        htpX 1552088 .. 1552109 + -10.2   -5.9003   CGAAATAACAACATT           CCTCTGAG ACAATC CTCAGAGG            TTTTTTTATTCCTTT 100 33
        ktrD 1553599 .. 1553617 + -10.3  -5.63103   ATCGGATAGAAAAAA             CACCGCA TGTTT TGCGGTG             TTTTTTTGATTGCCA 100 32
HC662_RS07790 NONE
HC662_RS07795 1554082 .. 1554114 +  -9.3  -4.90471   ACACAAATAAAAAAA     G-ACCTCTTAGGCG ATGTTC CGCTTAAGAGGTGC      TTTTCTATTTTAAAT  91 31
        kinE NONE
HC662_RS07810 NONE
HC662_RS07815 1558313 .. 1558348 +  -6.8  -5.14965   AAACAAACAAAAAAA    CCGCTG-ACTCGGCCCA AAA TGAGCAAAGTGCAGCGG    TTTTTTAGTGAACCT  83 19
        mtnE 1563186 .. 1563216 +  -7.7  -5.38047   GGACGAGAAACGAAA      CCTCTTTAGAC-GC GATT GCAGTTTGAAGAGG       TTTTTTATATGGATG 100 185
        mtnW NONE
        mtnX NONE
HC662_RS07850 1565739 .. 1565752 +  -8.1  -3.05384   GAAATTGAAAACACT               CCAGC ATCA GCTGG                TTAAATAAAAGGGGG  67 4
        mtnD 1566321 .. 1566342 + -15.9  -5.28414   CAATAAGCAGGAAAA           GCCCCGTTC AATC GAACGGGGC            TTTTTATATTTATTG 100 35
       spo0E 1567160 .. 1567180 +  -6.1  -5.60993   ATGCATATATAAAGA            GAGAGCTTT TCA GAAGCGCTC            TTTTTTTCTGGAAAA  89 53
HC662_RS07870 1567654 .. 1567676 + -15.6  -3.29144   CAAGAAGATAAAAAA           CCCTCCTGAC ACG GTCAGGGGGG           TTATGAAGCGGATAC 100 30
        mhqR 1570275 .. 1570288 +  -3.8  -5.22289   TCATCTTTGTTTCCA               GCTG ATGTTC CAGC                TTTTTATCTTTGATG  77 473
HC662_RS07900 1575556 .. 1575572 +  -6.6  -5.72616   TATGTTTTTCTAGAG              CACCTT CCGAA AAGGTG              TTTTTTTGTGTGAAT 100 251
        queC NONE
        queD NONE
        queE NONE
        queF 1578050 .. 1578069 + -10.8  -5.54907   GCAGAGGTAATGTAA            GACGTACA AATG TGTACGTC             TTTTTCTTTTATGCA 100 93
HC662_RS07925 NONE
HC662_RS07930 1579774 .. 1579786 +    -2  -3.64572   CGGAAACGAAACAAA                TTGA AATGA TCAA                TCATTTTTTTATTTG  48 53
HC662_RS07935 1580807 .. 1580827 +  -9.7  -4.42386   ATCGTTAATATAGTT            TCTCCTGCG AAA TGCAGGGGA            TTTTATACATAAAAA  89 57
HC662_RS07940 1581337 .. 1581355 +  -9.6  -5.71712   GGAAACAGACGGGAG             CGCCGATT CAT AATCGGTG             TTTTTTTATGTAAAA 100 13
HC662_RS07950 1582015 .. 1582048 + -16.3  -2.69151   GAACAGCCAAGAAGT     TAACAAGGTTTCTCA TGAG TGAGAAGCCTTGTTA      TCATATATGACAGAA 100 23
HC662_RS07955 1582946 .. 1582976 +    -9  -6.02914   GTTTTTGCCATCTAA       GCATAGAAGAGACA ATT TGTCTCAGCTGTGC       TTTTTTTTATATAAA 100 26
        ykvU NONE
HC662_RS07965 1584949 .. 1584970 +  -6.6  -5.34555   TGGACGGAAGAATAA           GCTGAGAG CGTAGC CTTTCAGC            TTTTTTGTCATATAA  89 26
        pfeT 1587102 .. 1587125 + -14.6   -5.4251   GCTTTTAAAATAAAA          CCAGCAGTCC AATC GGGCTGCTGG           TTTTTTATGTATCAA 100 28
        papB 1588614 .. 1588636 +  -2.6  -5.38951   ACAGGAAATAAAAAA           GGACTTTGTT CTC GACATCGTCC           TTTTTTATCTGCATT  76 40
HC662_RS07985 NONE
        glcT 1590840 .. 1590856 +  -4.4  -4.30995   ATTGAGGGGAAAAAA              CGGGAA GTCTA TTCTCG              TTCTTTTGTGCACCC  64 89
        ptsG 1593117 .. 1593144 + -12.8  -2.98986   TAAGGGTGTTAGTAC        GCTGTGCTTGTC AGAT GACAAGTACGGC         TGTATGATATAATAT  91 38
HC662_RS08000 NONE
        ptsP 1595191 .. 1595214 + -13.2  -5.53991   AGTAATGTACAAAAA          CCAGAC-GGCC TCC GGCCTGTCTGG          TTTTTTTCATAAGTA 100 36
        splA NONE
        splB 1596617 .. 1596640 +  -3.1  -5.60993   GAATATTTCACTTAA          AGGGCTGTT GTGACG AACAGCTCG           TTTTTTTATAAAAAG  81 26
HC662_RS08035 NONE
        glcT 1602292 .. 1602308 +  -4.4  -4.30995   ATTGAGGGGAAAAAA              CGGGAA GTCTA TTCTCG              TTCTTTTGTGCACCC  64 89
        ptsG 1604569 .. 1604596 + -12.8  -2.98986   TAAGGGTGTTAGTAC        GCTGTGCTTGTC AGAT GACAAGTACGGC         TGTATGATATAATAT  91 38
HC662_RS08050 NONE
        ptsP 1606643 .. 1606666 + -13.2  -5.53991   AGTAATGTACAAAAA          CCAGAC-GGCC TCC GGCCTGTCTGG          TTTTTTTCATAAGTA 100 36
        splA NONE
        splB 1608069 .. 1608092 +  -3.1  -5.60993   GAATATTTCACTTAA          AGGGCTGTT GTGACG AACAGCTCG           TTTTTTTATAAAAAG  81 26
HC662_RS08075 1610874 .. 1610900 + -16.8  -6.09196   TGTAATCCAATCAAA         TCCCCAAAACAT GAT ATGTTTTGGGGA         TTTTTTTATTTTAGG 100 36
HC662_RS08080 1611928 .. 1611947 + -10.8  -5.28481   TTTGATATTCGTTCT            GAGAAGGA TTTA TCCTTCTC             TTTTTTAATTCAATC 100 74
HC662_RS08085 1613843 .. 1613862 +    -3  -5.77677   CTACAAGCTGAAGAT            TAT-CTGTA TCG TACAGGATA            TTTTTTATTATTTTC  85 508
HC662_RS08095 1617140 .. 1617167 +  -7.8  -4.87892   AAAAAATAAAAAAGA        GGGTGCACA-TCT GAA AGATTGTGTGCCC        TTTCTTTTATTCAAA  86 32
        kinA 1619120 .. 1619139 +  -9.3  -4.02736   TCCCAAAAAATAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT  81 28
HC662_RS08115 1621796 .. 1621822 + -10.9  -5.45802   TTGAATAAATAAAAA        CAGCCGGTGCCT GAAG GGGCAC-GGCTG         TTTTTATTTTAAAAG 100 33
HC662_RS08140 NONE
HC662_RS08145 1627396 .. 1627409 +  -5.9  -6.24157   ATGGACTGATTTAAG               CGGCT GAAT GGCCG                TTTTTTTTTATGAAT 100 27
HC662_RS08150 1628339 .. 1628350 +    -3  -3.24747   CGAAATCTTTGAACT                TCTT CAGT AAGA                 TTCCTGATATAGGGC  46 16
HC662_RS08155 1629062 .. 1629075 +  -3.1  -3.57615   GCGGTAGAGCTGAAA               GTAAG TTGT CTTGC                TTTCAGAGGTATTCA  51 110
        abbA 1629326 .. 1629346 +  -5.5   -5.4505   GAGCACCCTATAATT            GATACTC GCCCAAA GAGTATC            TTTTTTATTGAAAGG  83 43
HC662_RS08165 1629888 .. 1629903 +  -5.4  -5.29716   CGCTCATTAAACAAG              TAGGCT TTAC GGCCTA               TTTTTATTATATTGG  81 23
        ccpC 1630920 .. 1630936 +  -8.7  -6.04953   AAAATCCATTTTAAA              GACAGCG ATA TGCTGTC              TTTTTTTATTTATAT 100 27
HC662_RS08175 NONE
HC662_RS08180 NONE
HC662_RS08185 1632870 .. 1632892 +  -5.5  -5.94214   TCTGATCACCCAATG           GGAACTGCT AAAGC GGCTGTTCC           TTTTTTTCTTGTCTT 100 36
        dapD 1633694 .. 1633716 + -16.4   -3.7732   TGATTTGATAAAAAG           GGCGTGGATA ATA TATCCACGCC           TTATTCGTATAGGCA 100 45
HC662_RS08195 NONE
HC662_RS08200 1635234 .. 1635247 +  -5.2  -5.88476   TTTCTTTGGGAAAAG               CGCG GTCAAG CGCG                TTTTTTATTTCTTTT 100 85
HC662_RS08210 1636822 .. 1636843 +  -6.6  -4.36903   CTAAGAACGAAAAAG           GGTCTAAC TTATTC GTTAGGCC            TTTCTGTTTAATAGG  75 47
HC662_RS08215 1637343 .. 1637357 +  -8.6  -6.02919   GTTCTTCATAAAAAA               CCTGAT CTC ATCAGG               TTTTTTTATTTGTGC 100 40
         rok 1638378 .. 1638401 +  -8.2  -5.52096   AAACATACAGAAAAA          CTGCTTG-GCG TAG TGCTCAAGCAG          TTTTTTATTGAGTTT 100 39
HC662_RS08230 NONE
HC662_RS08235 NONE
HC662_RS08240 NONE
        mobB NONE
HC662_RS08250 NONE
        moaD 1643671 .. 1643693 + -16.3  -6.23209   AGCGGAGGATGAAAA           CCGGACGGC ACTCA GCCGTCCGG           TTTTTTTTTGCTTCA 100 29
HC662_RS08260 NONE
HC662_RS08265 1647481 .. 1647503 +  -7.7  -4.30559   AGAATAAGAGCAAAA           GCCTTCAGT TATAT ACTGCAGGC           TTTTCGAATTTTATT  79 34
        yknW NONE
HC662_RS08275 1649411 .. 1649434 +  -2.4  -2.62184   CGATGGAACGGAAGT          GAAAGCATAA ATGA TTCAGCTTTC           TAATGTGCGAAAAAG  40 16
        yknY NONE
        skiZ 1651303 .. 1651325 + -16.4   -5.5762   TCTGCGTTACGAGTA           GCCTCATGCA ACA TGCATGAGGC           TTTTTTATGTTTAGT 100 25
HC662_RS08290 NONE
        pfkB NONE
HC662_RS08300 1655173 .. 1655195 +  -9.2  -5.40464   AGAAATAAGAAAAAA           GCGTCCTT GATTCGA AAGGACGC           TTTTTCTTTATCCTG 100 33
        lepB 1655894 .. 1655921 +   -12  -5.37593   CAAACAAAATAAAAA        CGCCTTGCTGGCC TTT GGACAGCA-GGCG        TTTTTTAATTTGAAA 100 29
HC662_RS08315 1658001 .. 1658016 +    -9  -5.53991   CGCGTGATAAAAAAA              GCAGAG ATTC CTCTGC               TTTTTTTGCTACATA 100 34
HC662_RS08320 1658967 .. 1658982 + -10.4  -5.09762   GCAGAAAAATAAAAA              GGAGGC GAAA GCCTCC               TTTTGTTTATTAAAA  93 29
        abhA 1662157 .. 1662179 +  -7.7  -5.47218   ATCATGTTGAAAAAA           GGCGGAG CGATACAAT CTCCGCC           TTTTTTTGCGTGCCA 100 42
        kinC NONE
HC662_RS08350 NONE
        ktrC 1665211 .. 1665228 + -10.5  -4.46656   AGCAGTAAAACAAAA             GCCGTCC AAAG GGGCGGC              TTTTAATATTATCAG  89 39
         ade 1667093 .. 1667116 + -11.1  -5.42259   ATTACAATAAAAAAA          GATGCACTC TCAAGT GAGTGCATC           TTTTTTTAAACCTCC 100 31
HC662_RS08375 1670165 .. 1670192 + -12.7  -5.61881   TTTTAAAATAAAGAA        ACGGCTGGCAC TGCACT GTGCCAGCCGC         TTTTTCTTTTTAGCG 100 30
HC662_RS08390 1671893 .. 1671912 +  -7.8  -5.08824   CTATCATGTGAAAAA            GAGCTGAC TTTG GACAGCTC             TTTTTTAAATAAACA  89 19
        pdhA NONE
        pdhB 1674435 .. 1674458 +  -8.2  -3.41569   AAACTGCATAATCGA          GAGGGAAGAT GAAC GTTTTCCCTC           TATTATATATCTGTT  71 43
        pdhC NONE
        lpdA 1677292 .. 1677315 + -13.2  -6.09196   ATGCTTAATCAAAAA          CAGCCCTCGCT TAA AGCG-GGGCTG          TTTTTTTATTTTGAC 100 40
HC662_RS08420 1678238 .. 1678259 + -15.9  -5.47159   TGAAGAGTAAAAAAA           GCATGCGGC TCAA GCCGCATGC            TTTTTATTTATTGAA 100 31
HC662_RS08430 1680198 .. 1680219 +   -13  -5.11033   AAGATGTAAGAAAAA           GAGCCGGG TGATAT CCCGGCTC            TTTTTTAAGCTTGTG 100 32
HC662_RS08440 1681307 .. 1681326 +  -5.7  -4.65895   AAGCGATAGTGAAAA            CGAACCG CGTGAA TGGTTCG             TTTTTACATGAGAAG  72 42
HC662_RS08445 1682238 .. 1682279 +  -4.4  -2.87132   TAGGCCTTTTGAACA GGATGA-CCTCAGCTTGTT AGAGA AGCTCGCGGAGGCTCATCC TGTATGGAAAGAGGA  48 38
HC662_RS08450 1682664 .. 1682693 + -16.6  -5.64274   GGTAAAGCCTTTAGC       GTAAGCTGCCGT ATGACG ACGGCAGCTTAC        TTTTTTTATCCATAC 100 22
HC662_RS08475 NONE
HC662_RS08480 NONE
HC662_RS08485 NONE
HC662_RS08490 1689761 .. 1689786 + -11.2  -5.15969   CTGATATAAGGAAAA         GCGCTTG-CCG GAAAA CGGACAAGCGC         TTTTTTAGATTAAGC  93 32
        typA 1692808 .. 1692820 +  -2.7  -3.05294   AGAAAAAAACAGCAG                GATTG TCT TAATC                TCTTGCAGAATTTGA  43 15
HC662_RS08510 1693188 .. 1693224 + -14.8  -3.61902   GACAGTCTGCAAAAT   CATAAAAAGACTCAGCT GAGA AGCTGAGTCTTTTT-TG    TTCTGTATGGTAAAG 100 21
HC662_RS08525 1695849 .. 1695865 +  -4.3  -4.57341   CGCATTGTGTCGCGG              AGCTGAG CGG CTCGGCA              TTTTTCAGAACAGTT  69 222
        glsA NONE
HC662_RS08540 1697561 .. 1697583 +  -4.2  -5.60993   AAATAAATGATAAAA           CTCAAACT TATTAAC AGTTTGGG           TTTTTTTATAACCGC  84 35
        ftsW NONE
         pyc 1702495 .. 1702526 +   -11  -5.40072   AAAAAGCATAATAAA      CCGGAGTGTATATC ATTG GATATACACTCTTG       TTTTTTTAAAAAAAA 100 30
HC662_RS08560 1705262 .. 1705277 +  -3.3  -2.90496   ACATAGATGGCATTT              TGAGT AAAAAA ACTCA               TAATTTAAGAGAAGA  45 141
        coxB NONE
        ctaD NONE
HC662_RS08575 NONE
        ctaF NONE
        ctaG 1710239 .. 1710261 + -12.1  -4.47271   AACGATATCATAAAA           GGTACAGCA AAACA TGCTGTACC           TTTTCATTACATTTG 100 28
HC662_RS08595 1711281 .. 1711295 +  -3.5  -2.53015   GCAAGACATTGTGAT               TCGCC ACGGG GGTGA               TAGATTGAAAAATAT  43 91
HC662_RS08600 1712347 .. 1712369 +  -9.1   -4.4261   CGATGGTAATGAAAA           GCCGCGG CGAATGGTT CCGCGGC           TTTTCCTATTCCGCA  84 32
HC662_RS08605 NONE
HC662_RS08610 1713230 .. 1713245 +  -3.9  -5.16237   GACAAAAGATTAAAA              GGCCC GAAAGA GGGTC               TTTTTTCGTGAGATT  73 28
        ricF 1713781 .. 1713801 + -11.2  -4.18018   GATGCAAAGTATCCT            GACGAGAC TGGCC GTCTCGTC            TTTTACATAAAAGAG  86 24
HC662_RS08620 1714124 .. 1714143 +   -15  -2.96822   GCTGTATAAAAAAAT            CCCCGCAG GCTT CTGCGGGG             TCCTTCTATTCCTTA 100 40
        rsmD NONE
        coaD 1715473 .. 1715494 +  -5.9  -5.83226   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT 100 20
HC662_RS08640 NONE
HC662_RS08645 1718698 .. 1718716 + -13.2  -5.01546   AGCTGAAAGCAAAAA             GCACCTGA TAC TCAGGTGC             TTTTTCTATAAGTTT 100 18
HC662_RS08660 NONE
        rpmF 1720908 .. 1720929 + -15.9  -5.71295   AACTAAGTAAGAAAA           GCGCAGGGT GAAA ACCCTGCGC            TTTTTCTTTTTCTCT 100 35
        gerR 1721641 .. 1721672 +  -3.8  -5.42975   ATGAACGTCTGAAAT      GAACCGGCCCTAT ATTTAGA ATA-GGCCGGTTG      TTTTTATTTCTATGC  79 40
HC662_RS08680 NONE
        bshC 1724928 .. 1724944 + -10.9  -6.24157   TAAAGTTTTAAAGAA              CCCTGAA TAG TTCAGGG              TTTTTTTTTATGGGT 100 43
        rsmH NONE
        ftsL NONE
HC662_RS08705 1729019 .. 1729057 +  -3.4  -5.66684   TCCAGATTAAAAAAA GAAAGCCTGC-T---GGGGA TTT TCCCCATTATGCAGGCTTTC TTTTTTTATACCTTC  81 31
HC662_RS08710 1731074 .. 1731097 +  -8.9   -3.8165   AGAAGATGAAAAAGA          GGCAG-CCGA TTAAT TCGGGCTGCC          TATTATTTTATTGCA  76 13
HC662_RS08715 NONE
HC662_RS08720 NONE
HC662_RS08725 NONE
       spoVE 1736401 .. 1736434 + -15.5  -3.17146   TGGGAAACAAATGAT     GCGATAACCCTGT CCAACAAA ACAGGGTTATCGC      TATGTTATAGAGAAA 100 78
        murG NONE
        murB 1738553 .. 1738578 +   -12  -4.13767   ACTGTAAGCAAACGA         CAAACGGCAT CGTAGT ATGCCGTTTG          TTTTGGAATAGACAG  95 74
       divIB NONE
HC662_RS08750 NONE
HC662_RS08755 NONE
HC662_RS08760 NONE
        ftsA NONE
        ftsZ 1743920 .. 1743945 + -14.9  -5.69262   CGCGGCTAATGTAAA         GGACAAAATCG TTTT CGATTTTGTCC          TTTTTGTTTTTCTCC 100 32
HC662_RS08775 1748521 .. 1748552 + -14.7  -2.91126   ACTGAAAAATAAGTG      TAAAAAAGCTGCC GTCACA GGCAGCTTTTTTA       TATACTCTCATTTAT 100 29
     spoIIGA NONE
        sigE 1750452 .. 1750464 +  -5.5  -2.82892   AACCCCTTGATTTTA                CAGGG ATT TCCTG                ATTTCGACTGTTTTT  52 57
        sigG 1751348 .. 1751389 + -17.1  -3.36135   TCATCAATAATGAAA T-GAAAAGCCTTTAAAACAA TTT TTGTTTTAAAGGCTTTTCTA TTGATTGCGGGTTGT 100 31
HC662_RS08795 1752433 .. 1752457 + -11.5  -5.18355   GTTTGTTTTTACTAA          GCCGTTTCATA ACA TTTGAAACGGC          TTTTTGATTTTTAAG 100 169
HC662_RS08800 NONE
HC662_RS08805 1754214 .. 1754227 +  -2.3  -5.18561   GATGTGGTAAAATAA               GTGGG AAAT TCCGC                TTTTTTAAATGTTTG  72 141
        pgeF NONE
HC662_RS08815 NONE
HC662_RS08820 1756243 .. 1756268 +    -2  -2.83103   GACGAACATCAGAGG         TGGTAAAGCGA GATGA TC-CTTTATCA         AGTTTTTTCGGTTTT  41 20
HC662_RS08825 1756543 .. 1756566 + -14.6  -3.64703   AGTGACAGTTTGATA          GGGGCTTGGC AGCA GCCAAGCCTC           TTTACATAGAAGGGA 100 41
HC662_RS08830 1757350 .. 1757364 +  -4.2  -3.55072   AGAGTTACGTTTGAA               CGACAA AAA TAGTCG               GTTTTTCAGTTTTTT  55 14
      divIVA 1758222 .. 1758251 + -12.9  -6.14618   GGTACCGCGAGATAA       GCTTTCTCGTCCC TTAT GGGATGAGAGGGC        TTTTTTTATTTTCTG 100 298
        ileS 1761066 .. 1761085 +  -8.5  -5.60993   AAATAATGAAAAATA            GTCCGGC GTTAAA GCCGGGC             TTTTTTTGTGCCAAG 100 35
        ylyA 1761554 .. 1761588 +   -13  -3.03792   AACCGATATCGAATA     TGGTCAGGCACTGT ATGAATA ACAGTGTCTGGCCA     GTTTATATGCCTGAT  91 4
        lspA NONE
HC662_RS08855 1763179 .. 1763201 +  -6.3   -5.9218   ACCTTGTCCTAAAAC          CCCTCTATGC TCTG GCA-GGAGGG           TTTTTTTCTTCTATA 100 149
        pyrR 1763869 .. 1763895 +  -8.9    -5.626   GCAGGTCTTTGTATG        CCTCTTTGCGTA AAAA TA-GCAAAGAGG         TTTTTTTATACAGTC 100 111
HC662_RS08865 1765346 .. 1765369 +  -8.9  -5.43866   CTCTATTTAACCATA          CCCCGAGTCT ATCTA AGAC-CGGGG          TTTTTTTCAGCCTTA 100 107
HC662_RS08870 NONE
HC662_RS08875 NONE
        carA NONE
        carB NONE
        pyrK NONE
HC662_RS08895 NONE
        pyrF NONE
HC662_RS08905 1774958 .. 1774973 + -10.4  -5.84381   TGCTGTGCGTGAAAA              CAGGCC TAGA GGCCTG               TTTTTTTATTAATCC 100 79
HC662_RS08910 NONE
        cysP NONE
         sat NONE
        cysC NONE
        cobA NONE
HC662_RS08935 NONE
HC662_RS08940 1781027 .. 1781049 + -16.4  -4.99043   AGACGAAAGAAATAA           GCCAGAGCAT ACA ATGCTCTGGC           TTTTCTTTATGCGGC 100 26
HC662_RS08950 1785592 .. 1785614 +  -8.5  -4.77165   ATGATATAATCTTAG           GGGTAATAG CATGT CTATTGCCC           TTTTATTATAGAACA  87 47
HC662_RS08955 1786570 .. 1786581 +    -3  -4.07568   CTTACTAGGCTAAAC                TAGA GACG TCTA                 TTTTACAGGGGGAAC  55 68
        remA NONE
         gmk NONE
HC662_RS08970 1787712 .. 1787738 +  -9.6  -5.47218   GAATAGTAGCACAAG         TAGCAACCTATA TCA TGTAGGTTGTTA         TTTTTTTCCGTGCGG 100 35
       coaBC NONE
        priA NONE
HC662_RS08985 NONE
HC662_RS08990 NONE
        rsmB NONE
        rlmN NONE
        prpC NONE
        prkC 1798035 .. 1798050 +  -3.2  -2.77013   AACAAGGAGGGAAAA              TATGCC TGAG GGCAAA               ATTATTAAGGCGCTA  44 39
        rsgA NONE
HC662_RS09020 1799618 .. 1799629 +  -5.8  -4.84527   AGAGCTGGGCATCCT                GAGC CTAA GCTC                 TTTTTCCTGTATGCA  77 53
HC662_RS09025 NONE
HC662_RS09030 1800494 .. 1800518 + -12.8  -3.85542   TTCACCACATAAAAA          CGCCTGCCAC ATATC GGGGCAGGCG          TTCATTTTGTTATAC  95 64
HC662_RS09040 NONE
HC662_RS09045 1803029 .. 1803057 + -20.5  -3.68394   TATATAGTTTCTGCA        GAATAGAAGGGCG ATT CGCCCTTCTATTC        TTATGTCTGCTTTTA 100 20
       sdaAB NONE
       sdaAA NONE
        recG 1806789 .. 1806806 +  -6.3  -3.05384   AAAAATTGAGCTGAG             CACCAGA AGTT TTTGGTG              TTCAGTCAGAAACAA  56 27
        fapR NONE
        plsX NONE
        fabD NONE
        fabG 1810186 .. 1810198 +  -3.5  -3.83102   ATGGTGATGTAAGTT                TTTTT CTC AAAAA                TTTCATCATAGTTTC  53 29
        acpP 1810530 .. 1810541 +  -7.2  -4.25458   TCCCGCCGAAACGCG                GGGC TTTA GCCC                 TTTATTCGTGCAGTT  76 55
        rncS 1811392 .. 1811413 +  -8.7  -3.75535   TACGAAACAATAAAA           TCCCCCTGA GTCG TAAGGGGGA            TTTCAGTATGTATGC  76 28
         smc NONE
        ftsY 1816071 .. 1816099 +  -7.6  -5.61596   TTAATGAATAAAAAA        CGAGTGTAAAAT GGACG GTTTTATACTCG        TTTTTTTATACGCAT 100 37
HC662_RS09105 NONE
HC662_RS09110 NONE
         ffh 1818734 .. 1818754 +    -4  -3.61398   TACCTTTTATGTAAT            CGGTTATA CATGA TAAAACCG            TTGTTAAGAAAAAAC  53 27
        rpsP NONE
HC662_RS09125 1819359 .. 1819379 +  -3.9  -5.40072   ATATTTGACTAAAAG            GGAGAGG GCCGGCA CCTCCCC            TTTTTTTACACGCAA  79 29
HC662_RS09130 1819851 .. 1819863 +  -5.5  -2.62184   AAAAGTAATTGAAAT                TCGCC AGA GGTGA                TCATATGACAACGCG  51 13
        rimM NONE
        trmD 1821122 .. 1821143 +  -2.3   -3.4178   GGGAAAAAGAATAGA           TTTTATTGC ATAG GCTATGAAA            TTGTGATAAGATACT  46 27
        rplS 1821624 .. 1821647 + -12.6  -5.60993   GATAACGAACGAAAA          GAGCTTGTTA CCTG TAACAAGCTC           TTTTTTTATACAGAA 100 42
        ylqF 1822598 .. 1822625 +  -9.2  -5.14563   GAACAGCCGACTATG        TAAAGGCGCGCA GAAA TGCGGGTCTTTA         TTTTTTCCTGACCGA  91 23
        rnhB 1823566 .. 1823579 +  -6.7  -4.08216   CGAAACACTAAACGG               GGAGA AGCG TCTCC                TTTTAGGAAAAGTGC  71 153
HC662_RS09165 NONE
        sucC NONE
        sucD 1827742 .. 1827770 +   -11  -4.96848   AAACGCATTAATAAA        GAAGGGACAGCC GTCAA GGCTGTTCCTGC        TTTTTCTGTCAAAAG  93 30
        dprA 1828694 .. 1828712 +  -2.4  -3.57908   GGAACCCTTTTGAAT             TATCGTTT GAC AAACGGCA             TTGTAATATTTAATA  48 28
        topA 1830953 .. 1830974 + -10.9  -4.21954   AACCACAGAAGTAGC           GGTGAGCAG GGTC TTGCTCACC            TTCTTTGTGTGTTAA  88 27
       trmFO NONE
        xerC 1833314 .. 1833329 +  -6.2  -3.02856   GCTTTTAAGAAAAAT              TAAAGG AGGC CCTTTA               TGTCATCTTTTCATG  56 23
        clpQ NONE
        hslU NONE
        codY 1836123 .. 1836143 + -10.5  -5.31275   CATTAATAAATGAAA            GAACCTCTT AAA AAGGGGTTC            TTTTTTATACTCAAA 100 35
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG 1840335 .. 1840349 +    -5  -2.69964   GCAAGAGGCGGAGGG               GACGAT ATT ATTGTC               TAATATCATTAAACA  49 8
        fliH NONE
        fliI NONE
        fliJ 1842851 .. 1842865 +  -2.8  -2.62184   TTTATGATTCAAGGC               CATTAG GAG CGAATG               TAATGTCCGGCAAAA  41 20
HC662_RS09255 NONE
HC662_RS09260 NONE
        flgD 1845349 .. 1845359 +  -5.4  -3.04144   CGTGGAATGTAATGT                 CTGT AGC ACAG                 TCTTCGAAATAAAAA  53 3
        flgG 1846192 .. 1846219 +  -9.8   -3.8823   TAAACGTTAAGGAGG        GAGGGGAGGCGA GTAA TCGCTTCTCCGC         TGTTTTATGATTAAA  83 31
        swrD NONE
        fliL NONE
        fliM NONE
        fliY NONE
        cheY NONE
        fliZ NONE
        fliP 1850716 .. 1850728 +  -4.1  -3.08522   ATTTAATTGTGAAAT                CTTTG CTT CAGAG                CTTTTAGGGTAGGTG  48 6
        fliQ NONE
        fliR NONE
        flhB 1852885 .. 1852897 +  -2.7  -3.53012   AAAACAAAAAGTATA                TTGAA CTT TTCGA                TTTAAAAGGAGAGAA  47 22
        flhA NONE
        flhF 1856043 .. 1856058 +  -3.2  -2.71712   GATTTTGTAAGGATG              CTGTGC AGAT GAACAG               ATTTGACCAAGCAGC  43 14
HC662_RS09335 NONE
HC662_RS09340 1858011 .. 1858032 +  -4.5  -2.67058   AAAAAAGAGAGGGTG           TGATTCAAA TGGA TATGAATCA            GTATTTAGATGTCTT  47 23
HC662_RS09345 NONE
HC662_RS09350 NONE
HC662_RS09355 NONE
HC662_RS09360 NONE
        sigD 1862445 .. 1862456 +    -3  -3.84246   TGCTGGAAAAAGTGA                TTCA ATAA TGAA                 TTTCATGGTTAGCGA  51 18
HC662_RS09370 1863057 .. 1863069 +  -4.8  -3.28924   TTTATGCAGAGGGTG                CTGC AGGCG GCAG                TTCTGCACAAAAATG  54 98
        rpsB 1863879 .. 1863907 + -12.6  -5.00616   CGTAACCTATCAAAA        GGTGATAAGAGG GACTG CCTTTTATCACC        TTTTTTCAAGAAAAA 100 36
HC662_RS09380 1864894 .. 1864918 + -13.7  -4.61633   TCTTTTCAGGCAGTA          TAGGGGACACA CTT TGTGTTCCCTA          TTTTTAAAACTATAT 100 70
HC662_RS09385 NONE
         frr 1866304 .. 1866340 +  -2.4  -3.29038   TACAATAGATAATAG    TGAAAAGACCCTCT CATGTTTAC AGGGGGTTTTTTTG    TTAATACTGTTGATT  45 53
HC662_RS09395 NONE
HC662_RS09400 1867991 .. 1868007 +  -6.7  -2.87026   TACTTTCTGCTTGCC              CTTTTTT CAT AAAAAAG              TCTAATATAAATATG  57 14
         dxr NONE
        rseP NONE
        proS 1872262 .. 1872292 + -12.7  -2.77414   TAAAATAGAAATAAT       AGAAGGTACCTCA TTGCC TGAGGTACCTTCA       CTTATGATGTTTTTA  90 70
HC662_RS09420 1876648 .. 1876671 + -12.6    -3.524   GTTCTAACATGGAAA          GCAGAATTTC TCTG GAAATTCTGC           TTCTATGCATACATA  95 34
        rimP NONE
        nusA NONE
        rulR NONE
HC662_RS09440 NONE
        infB NONE
HC662_RS09450 NONE
        rbfA 1882009 .. 1882035 + -10.9  -4.54477   CTGAATAAAAATAGA         GAGGATAGGCG TATAT CGTCTGTCCTC         TTTTCTGCGTTTTAA  90 33
        truB NONE
        ribF 1884001 .. 1884013 +  -3.5  -3.43773   TGCAATGCACACAAA                TTTTA TTC TAAAA                TATTTGCATATAGGC  49 43
        rpsO 1884419 .. 1884434 + -10.4  -5.36965   CGATAATCGTAAAAA              GCGGGA GGAT TCCCGC               TTTTTTATCGTATTA 100 35
         pnp 1886714 .. 1886735 +  -8.7  -4.66535   AATGAAAACATAAAA           GGAGCCTGGG AGA CCC-GGCTTC           TTTATTTTGAAGCTT  86 40
HC662_RS09480 1887784 .. 1887794 +  -3.2  -3.64703   GAAGTAACAGATGCA                 GGCA GCT TGTC                 TTTGAATAGGAGGAA  51 34
HC662_RS09485 1889052 .. 1889076 +  -7.9  -5.77632   CGTCTTAAAAGGAAA         TGCCTGC-CC TATAAC GGAGCAGGCA          TTTTTTTATCCTTTT 100 33
HC662_RS09490 1889431 .. 1889451 + -11.2  -5.36441   AAAGTAAACATGAAA            CATCGGCT CCGGC AGCCGATG            TTTTTTATATGAAAA 100 77
        dpaA NONE
        dpaB NONE
         asd 1892259 .. 1892292 +  -8.3  -3.08996   TCCTAAAGACGAATA     GAAGAGAGTAAGGC GCTATCA GCC-TGCTCTCTTC     TGTTACGTCCGAATA  68 52
        dapG NONE
        dapA 1894469 .. 1894500 +  -4.4  -4.35091   ACAGTGAAACAAACG      CGGTCATTCTCA CATTCAGC TGAGTTTGACCG       TTTCTTATACATATT  64 53
HC662_RS09520 1896295 .. 1896321 +   -16  -5.58209   AGTATAATATCTGAA         TAAAGGCCGGAG CTG CTCCGGTCTTTA         TTTTTTTGCCTTTCA 100 34
        tepA NONE
        tepJ 1897409 .. 1897427 +  -7.4  -4.38203   TCCTACAGAAAAAAC             GCAGCC TGTAAAC GGCTGC             TTTCTTCATTATGTA  78 85
     spoIIIE 1899827 .. 1899855 + -10.4  -3.25191   AAAAGAGAAATATGA        TGAGCTCTCTTC TTAAT GAAGGGAGTTCA        GTTTTCTGCAGTTAC  79 10
         rny 1901806 .. 1901832 + -12.5  -5.40072   GTAGAGTATGCAAAA         TAAAGTGATGC GCTAA GCATCACTTTA         TTTTTTTGACGGCCA 100 23
        ymdB 1902818 .. 1902839 +  -5.9  -2.66711   AGCAACATCTAATAA           TGATTGTTC TAAT GAACACTCA            CTTATCCATTGTAAA  54 171
       spoVS 1903151 .. 1903179 + -16.2  -5.10877   CAAATAAAGCATTCT        CAACCTGTTTGC CTCAT GCAAACAGGTTG        TTTTTCATTTATTGT 100 44
         tdh NONE
HC662_RS09565 1905634 .. 1905655 + -13.1  -5.23396   CTCCAGCTATTGTAA           GAGGAAGAG AATA CTCTTCCTC            TTTTTATTCCTTATT 100 26
        miaB NONE
        ricA 1907742 .. 1907764 +  -9.9  -5.48303   GCTGTTCTTTCTAAA          CACGGTGCCT TTAC AGGC-CCGTG           TTTTTTTAGACTTAT 100 27
        cotE 1908553 .. 1908583 +  -6.1  -5.49569   CTGAAGAATAAAAAA       GGGACTAGGGG AGGCAGTAC CCCCAAGTCTC       TTTTTTATATTGATA  85 30
        mutS NONE
        mutL 1913222 .. 1913252 +    -4  -5.94214   CCATACATTTTTCAA       GCATTGAGATATTC TTC GAATTGATCAATGC       TTTTTTTATTGTGTT  93 82
HC662_RS09595 NONE
HC662_RS09600 1915392 .. 1915435 +    -4  -5.06414   TTTAAGGGGAATAGT GGCACCACCCTATCTAC ATTCTTAAACA GTAG-TAGGGTGGTATC TTTTTATTAGAAAGA  73 51
HC662_RS09625 1919492 .. 1919527 +  -4.9  -3.43405   AATAGCTCTATGCAA   GC--AGCGCCTTTGA ATGAAAGC TCAAAGGCGCTAAGC    TGTATTATTTTGATG  56 150
HC662_RS09645 1922794 .. 1922806 +  -3.3  -5.22943   TTAATTACCAAGTGA                GGTTG TTC CTACC                TTTTTTGCCTTTCCT  75 109
HC662_RS09650 1923777 .. 1923790 +  -3.1  -3.75678   GGAGGCAAAACATAC               GATGG CAGA TCATC                ATTTTTATTTAAAAG  53 99
HC662_RS09655 1924225 .. 1924268 +   -15   -3.5394   GTAAAACGGGCTGGT GAATAAAAAACAGACGGTC ACTCACA GACCGTCTGTTTTTT-TTC TTTAGCAGGGGCTTT 100 20
HC662_RS09675 NONE
        miaA NONE
         hfq 1927201 .. 1927220 +  -7.8  -5.94713   GTTCTTTTGTAAGCT            GACCATGC CAAG GCACGGTC             TTTTTTTTATGAGAT 100 118
HC662_RS09690 NONE
HC662_RS09695 1927926 .. 1927957 + -12.4  -4.13963   TAAAAACGACACCCT      GAGTAGGACGAGAG ATGA TTCTCGTTCTGCTC       TCTTTTTTGGGCCCT  95 75
        nrdI NONE
        nrdE NONE
        nrdF 1931570 .. 1931590 + -12.7  -4.27584   TTTGGAGATGAAAAA            GAGCAGATA TAA TATCTGCTC            TTTTCGCTTGAAGGT 100 14
HC662_RS09715 1932255 .. 1932281 +   -13  -5.24531   TCTTGAATAAAAAAA         CCCGGTTTCTCG TGA TGAGGAGCCGGG         TTTTTTATGAACGCT 100 31
       spoVK 1934904 .. 1934930 +  -8.8  -5.25893   GCGTCTGGTTCTGTA         TAGACCTCTC AGTTTTC GAGAGGTCTG         TTTTTTGCTGTATAT 100 23
        hflX NONE
HC662_RS09735 1937586 .. 1937596 +  -2.6  -3.70076   AACAATTAATTTAAA                 TTTT TTA AAAA                 TTTCACTGAATTTCA  49 27
        glnR 1938109 .. 1938121 +  -3.4  -2.98356   TTCATTAATCCGTTA                GCAA CTGTT TTGC                TATATACATTTACCT  45 33
        glnA 1939502 .. 1939528 + -11.6  -5.82281   GTATTAATTTTTCAA         TCCCTTGTCACT ATT GGTGTCAAGGGA         TTTTTTTATCTGTTT 100 34
HC662_RS09750 1942317 .. 1942332 +    -9  -5.75538   AATAAAGATAAAAAA              GGTACC AAAC GGTACC               TTTTTCTTTTTTAAA 100 36
HC662_RS09755 1943450 .. 1943467 +    -7  -3.98981   AGTTTAAACAAAAAA             TCCTCC CACAGT GGAGGA              TTATTATTACATATT  72 40
HC662_RS09760 1945396 .. 1945422 +  -5.3  -4.54727   TAAAGTTATAAAAAA         GAAGTATTTTT ATTAA AGAGATACTTC         TTTTGATTTAAACAG  72 54
HC662_RS09770 NONE
HC662_RS09780 NONE
HC662_RS09785 1947048 .. 1947066 +  -3.9  -5.35815   AGAAAACACCAAGGA            GCAGATCT GAAT AGA-CTGC             TTTTTGTTTAGTGTG  79 16
HC662_RS09790 NONE
HC662_RS09795 NONE
HC662_RS09800 1948936 .. 1948947 +  -4.4   -5.5762   ACCAACATTTACATC                GAAC TTTT GTTC                 TTTTTTATATTTAAT  84 256
HC662_RS09805 1949645 .. 1949662 +  -4.1  -3.72576   TGTTGAGCAAGATGG             CAAAGGA GTTT TCCTTCG              TTTGCTCCGAAAAGC  55 404
        catA 1950457 .. 1950475 +   -11  -3.72051   GTGTGATAAAAAAAA             GAGGCCTG ATA TAGGCCTC             TTTCAGCTTGTTGAC  84 45
HC662_RS09820 1951733 .. 1951759 +  -2.3  -3.34398   TTTTGGTTTAAAGAA         TAAAAGAAAGC CGCAA GCTTTCAATTA         TCTTTCACAGGCAAA  45 61
HC662_RS09830 1953924 .. 1953935 +    -3  -3.57561   CAAAGTTTATTTGGA                TCAT ATTG ATGA                 TTTCAAGGCTTGAAA  49 1
HC662_RS09835 1955611 .. 1955629 +  -4.6   -3.4574   GCATATGAAAAAGGA             GACTTCTA TTT TAGAACTC             CTTTTTCATAATAGA  53 44
        xylA NONE
        xylB NONE
HC662_RS09855 1961186 .. 1961207 +  -5.8  -3.53281   TTCATACAAAAATAT           CCCCTCAC CTTAAC GTGAAGGG            TGCTTTTTTATTATC  60 106
HC662_RS09895 1968734 .. 1968757 +  -8.9  -4.51994   GACAGGCTTTCATTT          GAGGTAGCA GTTTAA TGCTGCCTC           TTTATTGTTCATTAA  84 11
HC662_RS09900 1970155 .. 1970175 + -11.3   -5.4505   ATTTCATATAAAAAA            GATTAGCTT TTG AAGCTAATC            TTTTTTATTAAGAAG 100 40
HC662_RS09930 1973606 .. 1973620 +  -8.6  -5.64873   TTCGAAAACAAAAAA               GAGAGA TAC TCTCTC               TTTTTTATTCTTCGA 100 53
HC662_RS09940 1974460 .. 1974486 +  -5.2  -3.81322   CTCATTATGGTTATA         TTTCTGGTTTAG AAT CTAAAACAGGAG         GTTTTTTATGCTTGG  60 14
HC662_RS09945 1974703 .. 1974717 +  -6.4  -5.67063   TCCCGACTGCAAACA               GGCTCA TTT TGAGTC               TTTTTTTATGATAAA  90 46
HC662_RS09950 1976075 .. 1976098 + -10.4  -5.88565   ATCGATTTCTCTAAA          GCGTGATGAA GACG TTCATCATGC           TTTTTTTATTGTGAA 100 42
HC662_RS09955 NONE
HC662_RS09960 NONE
HC662_RS09965 1980213 .. 1980233 +  -8.3  -5.01546   AGGTGCTTAAAATCA            GAAGAGAAG AAA CATCTCTTC            TTTTTCTATGCATTT  90 48
HC662_RS09970 1981546 .. 1981565 +  -6.4  -3.09968   TCTGTTTTAGCGTTC            GAGGCATC TCCT GATGGCTC             TCTTACGATTACATC  60 419
        yndJ 1983430 .. 1983442 +  -5.5  -3.61268   ATAAAGAAGAGGCTT                CGGCT GAA AGCTG                TTTGACGATTCAATC  59 42
HC662_RS09990 1984438 .. 1984462 +  -8.5  -3.25729   GTAACTACTGAAAAA          TAGGAGGCGAC AAG GCAGCCTCCTA          TTCCTCATGCTTCTC  70 84
        fosB 1985707 .. 1985718 +    -3  -4.10657   TTTTAAATGACAGTA                CAAA ATCT TTTG                 TTTTGGAAAATATCA  55 220
HC662_RS10020 NONE
HC662_RS10025 1988464 .. 1988490 + -11.7  -4.63586   ACTTCACTAATATAA         GAGGAATACGG AAATA TCGTATTCCTC         TTTTGTATATACTAT 100 31
         tkt 1990641 .. 1990662 +  -8.8  -5.42164   AGTAAGTCTTTCAAA           GAGGATGA GTCAAA TCATCCTC            TTTTTCTTGTTTATC 100 36
        sirA NONE
HC662_RS10040 1991573 .. 1991598 +  -9.2  -4.14739   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCAATCA  82 65
        ccdA NONE
HC662_RS10055 NONE
HC662_RS10060 1993733 .. 1993754 +  -8.8  -5.63517   AAATGAATTAAAAAA           CCTTTCCT CCTGCC AGGAAAGG            TTTTTTATTTAAGAA 100 30
        acnA 1998183 .. 1998209 + -11.7  -4.83169   CTGATGAATCAATAG         GAAGAGAAGGC ATAAA GCTTTCTCTTC         TTTTTATGACAAAGT 100 37
HC662_RS10090 1998741 .. 1998761 +  -6.2  -5.80817   GAAATGGAACAAAAA            CTGGATCT TGATT AGATTCAG            TTTTTTTATGTTCAG 100 11
HC662_RS10095 NONE
        sspN NONE
HC662_RS10105 1999466 .. 1999479 +  -8.1  -6.02919   TACCGCTCTTAAAAA               CCAGG GAAA CCTGG                TTTTTTTCTTTCTGA 100 29
HC662_RS10110 NONE
HC662_RS10115 2000282 .. 2000302 + -14.1  -5.54885   TCATTTGTAAAAAAA            GAACGCACA TAA TGTGCGTTC            TTTTTTATTGGTATT 100 31
HC662_RS10130 2001841 .. 2001872 + -14.7   -5.0925   AATAGGTGCAGAACT      GCAAAAATCCTTG TGAATT CAAGGATTTTTGC       TTTTTAATTTTAAGA 100 36
        parE NONE
        parC 2006623 .. 2006645 + -13.4   -4.3778   AACAATAATAAAAAA           CCCGCTCACA TTA TGCGAGCGGG           TTTCGTTTGTTTTTT 100 33
HC662_RS10150 2009073 .. 2009098 + -14.9  -5.38054   AAGCTTAAGAACACG         GCTGCATTCAA TCTA TTGAATGCAGC          TTTTTATTTGTCCAA 100 33
HC662_RS10155 2010900 .. 2010924 + -10.1  -4.36063   TAGTTATGCGTTTGA          CGGACATCA GCAATAA TGATGTCCG          TTTTCATCATCTTAT  86 38
HC662_RS10160 2011594 .. 2011604 +    -4  -3.24161   AGGTACCCTTAACGA                 TTTG CGA CAAA                 TGTTGTCACGCTTTG  49 392
HC662_RS10200 NONE
        galU NONE
HC662_RS10210 2055330 .. 2055364 + -10.1  -5.71712   ACGATAGCTAGCGGA     TATGCATAGGGATGA TTGAT TCTCCCCTATGCATA     TTTTTTTATCTGCGA 100 34
        iseA 2111464 .. 2111481 +  -9.1  -5.95539   TTATATAAGAAAAAA             CGCCCTGC AAA GC-GGGCG             TTTTTTTATTTGGCA 100 33
         ggt 2114719 .. 2114743 +  -7.9  -5.39721   AATAAAAAGAAAAAA          CTGTACTCGCT TCA ATTGAGTACAG          TTTTTTGTATGCTGA 100 36
HC662_RS10350 2116877 .. 2116904 + -13.6  -4.58424   CATGGAATAAAAAAA        GAAACCGG-CTGA TAT TCAGACCGGTTTC        TTTTATATGATAATC 100 31
        gltC 2124047 .. 2124073 + -11.7  -4.90906   CAATAAAAAAACGAA        CCCGA-GCTTCT ATAA AGAAGCTTCGGG         TTTTTGCTCTTGTCA 100 35
HC662_RS10390 2128094 .. 2128135 +  -5.3  -4.56775   GCAGATAAAGATGAA TGATATCCCGTTGTTACGAT CAG AATG-GACAATGGGGTATCA TTTTTAAGGAGGACT  72 33
HC662_RS10395 NONE
HC662_RS10400 2129737 .. 2129756 +   -10  -4.87291   AATACATGATAAAAA            GCGCCCCTG AAA CAGGG-CGC            TTTTTGATTAAGATG  93 258
HC662_RS10420 NONE
HC662_RS10425 2136439 .. 2136460 +  -3.7  -4.72272   ATTACTGATTAAAAA           GGC-TCGCTT AAA AAGCAAAGCC           TTTTTAATCAGAAAG  68 55
HC662_RS10455 NONE
HC662_RS10460 2142767 .. 2142799 +  -8.6  -4.62069   ACTAATCAATTAAAA      CGGAGCTAACTT TAAAGAAGT AAGTTAGTTCCG      TTTTTACAGTGAAAA  86 36
        hpaB 2146364 .. 2146383 +  -7.1  -4.14652   TTCATACTAAAAAAA            CAGCGGG AAAAGG TCCGCTG             TTTCGTATTTTTCAT  73 47
HC662_RS10485 2149256 .. 2149284 +  -6.7  -5.32944   GCTACTGACACAAAA       GAGGC-CTGCGT AAAAAA ACGCCGAGCCTC        TTTTTTACTTATAGG  88 33
HC662_RS10505 NONE
HC662_RS10525 NONE
        phrK 2156868 .. 2156888 +  -7.6   -5.8096   AGATCAATGAATATA           GCCCAC-CT TATG AGAGTGGGC            TTTTTGTTTTTTATC 100 46
HC662_RS10535 2157437 .. 2157459 +  -4.7  -3.33483   TCTTTGTAATTTTAA           GCTGCAGGA AATGA TCCAGCTGC           TTGGTCATTTCGATA  54 77
HC662_RS10555 2160127 .. 2160137 +  -2.6  -3.31157   GATGAACATGGCAAT                 TATT ATC AATA                 TTGATGTGATGCTTG  46 44
HC662_RS10565 2161281 .. 2161311 + -14.1  -4.66833   ACCCTTTTTAAAAAA       GTCTTGGTCCTGC GAATG GCAGGGTCAAGAC       TTTTTCAGGTTGAAG 100 42
HC662_RS10575 2163494 .. 2163513 +  -4.4  -5.49568   GGGAAATTGAAAAAA            GAGCATGTA AAT TA-ATGCTC            TTTTTGTTTTAAATT  81 237
         bla 2167919 .. 2167941 + -12.1  -3.78934   TCTCAAATCGTAGAT           GAAGACTCC TTTTT GGAGTCTTC           TTATTCTGAAACCAG  90 28
HC662_RS10620 2176360 .. 2176386 +  -8.8  -3.96449   ACTCAAGGGAGTCTT        GCTCATCCCCT AATGAA AGGGG-TGAGC         TTATTTCCAGTATTG  79 228
HC662_RS10630 2179053 .. 2179077 +   -10  -3.24747   AGAATGAAGACCAAA          GGCTGCCGAT AATGA ATCGACAGCC          TTAATAATCTAGGAC  78 125
HC662_RS10665 2186330 .. 2186346 +    -8  -5.80364   TACAATTATCACTTA              GAGCCT GATTG AGGCTC              TTTTTTTCTTGGAAT 100 92
HC662_RS10670 2186706 .. 2186722 +  -3.8  -4.54026   GCCTTCAATTCAAAT              GAATTT CTTTA AAATTC              TTATTTTATTTAAAA  66 70
HC662_RS10715 2190844 .. 2190863 +  -6.5  -5.27335   ATGCGGTATGAAAAA            GAGCATT TAGATT AATGCTC             TTTTTGTTTAAAACA  88 16
HC662_RS10720 2191370 .. 2191386 +  -2.3  -4.77925   CTGTGTAAATAATAA              GATTAAT TAA ATTAAAC              TTTTTCCCCTTTTTT  67 194
HC662_RS10790 2200317 .. 2200340 + -10.4  -3.37474   AGGAAAACACCTCAT          GGTAAAGAGT TTTA ACTCTTTGCC           TTGTGGCCTCTTATG  79 11
HC662_RS10795 2201285 .. 2201310 +  -9.8  -5.88061   CCGAGATAAAAACCC         TACCCTTCTC TTAGTT GAGGAGGGTA          TTTTTTTCGTTTTTT 100 32
HC662_RS10800 NONE
HC662_RS10805 2202724 .. 2202743 + -10.7  -4.59919   TATGTTTTTCTTATA            CCCCCTC CAAATT GAGGGGG             TTATTTTTATGGTTT  89 41
        yokF 2215824 .. 2215843 +  -7.9  -5.72622   ATGCGAACGTTAATG            GAAAGCC CTTTGT GGCTTTC             TTTTTTATTTCTCGG 100 28
HC662_RS10905 2223279 .. 2223301 + -16.4   -5.5208   GCCTCAATACGCAAA           GACGTTTGCC TTT GGCAAACGTC           TTTTTTATGTTATCC 100 477
HC662_RS10945 2228838 .. 2228876 +  -5.2   -5.2112   CACAATAAAGAAAAA   GACATCCTTGCCCGCTAG CAG CGATTAAGCAAGGATGTC   TTTTTTAATCGTGTT  79 8
HC662_RS10955 2230090 .. 2230128 + -14.2  -3.55444   GAGTCTATCAATTTA  C-TGACAAAAGCCCAAA AATTGA TTTGGGCTTTTGTCATG   TTTACAAGCTCAAAA 100 41
HC662_RS10970 2232327 .. 2232339 +  -3.4  -3.15758   CAAGTTGTGCTGTAA                TGGT GTAAA ACCA                TTGATGGAGGATTCT  46 62
HC662_RS10975 2233336 .. 2233360 +  -7.3  -4.59773   GATAAACATTAATCA          GCTTGTAAA TTTCTTT TTTACAAGC          TTTTTCAGCGTAAAC  79 29
HC662_RS10980 2234563 .. 2234594 +  -4.5  -5.29445   ATGCCTGACAATGAA      GGAGGTCTTCT CTTATACACA AGAAGGCTTCC       TTTTTATTGTTCGAG  79 33
        desK NONE
        desR 2236411 .. 2236434 + -15.4  -4.82901   TGGTTTAAATAAAAA          GGATCTTGGC AGAT GCCAAGATCC           TTTTTGTAACCCCAG 100 29
        dhaS 2244952 .. 2244968 +    -8  -6.04953   TGCATGTCAAAAAAA              CTGCTG CCTGC CAGCAG              TTTTTTTCTTTCTGT 100 43
HC662_RS11040 NONE
HC662_RS11045 2247774 .. 2247792 +  -8.8  -4.20868   ACTCTATTAAAAAAA             GCCCCC TTTTCCC GGGGGC             TTCTTGTTTTAAAAA  83 31
HC662_RS11055 2250351 .. 2250376 +   -12   -5.7946   TCGGCATACAAAAAA         GGTACATCAC TTTATC GTGATGTACC          TTTTTTTATTAGCCC 100 42
HC662_RS11100 NONE
       rsbRC 2264480 .. 2264504 + -13.7  -4.90869   CTTGAAATTAAAAAA          GGTATAAGGCT AAA GGCCTTATACC          TTTTTGATTAATCAT 100 19
HC662_RS11130 2267355 .. 2267376 + -15.9   -5.1356   TCATCCGATAAAAAA           CGGCCTGCA CCGA TGCAGGCCG            TTTTTATTAATAGAA 100 30
HC662_RS11145 2269793 .. 2269818 +  -8.3  -4.60073   TGAAACATAGCAAAA         AAGAGAGCTTC ATCA GAGGCTCTCTC          TTTTATAATTCTCTC  86 46
HC662_RS11155 2271313 .. 2271337 + -14.4    -5.626   TAAGGATATGAAAAA          CCTTAGTCCG AAATA CGGACTAAGG          TTTTTTTATACAATC 100 38
HC662_RS11170 NONE
HC662_RS11175 2274751 .. 2274775 + -20.1  -5.25805   AGGGGGCATAAAAAA          CCCATACGCGG CAG CCGCGTATGGG          TTTTTTACATTTCTT 100 30
HC662_RS11185 NONE
HC662_RS11190 2277424 .. 2277448 + -12.2  -4.44284   ACCAAACACAATAAA          GCCCGCTTAT CAATT GTAAGCGGGC          TTTTACTGTTAGATT 100 75
HC662_RS11205 2279397 .. 2279422 + -16.3  -4.74012   AAGCCTTAAACTGCA         GAAAACTGCGG AAAT CCGCAGTTTTC          TTTTCATTTTGTCGT 100 32
HC662_RS11225 2281338 .. 2281367 +  -2.9  -4.18018   TTCTGTTCTGTGGCC       GATAATGCGAAAG AGTT CTTTTCCATAATC        TTTTACATAAACGAC  56 427
        cgeA 2291952 .. 2291971 +  -2.2  -2.61997   AAAGCGTTACGTTCT            TTTCATAA CATC TGATGAAA             GTCTTGTATATCCAG  40 18
HC662_RS11305 2292924 .. 2292943 +  -9.4  -5.21709   CGCTTTCTTGAAAAA            TCGTTCAT TGAT ATGAACGA             TTTTTTGATCTGCAG 100 30
         alr 2296202 .. 2296230 +  -9.6  -5.77856   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTTTGATTTATT 100 438
HC662_RS11335 2297773 .. 2297800 +  -7.1  -4.08216   AAACGGTGAAAAAAA        GCACATACC GCTATATATG GGTATGTGC         TTTTCACAGCGCTCA  73 32
HC662_RS11375 NONE
HC662_RS11380 2305101 .. 2305121 + -15.5    -5.252   TGTCGTAACAAAAAA            GCGCAGTCT TAA AGACTGCGC            TTTTTTATGCACGTA 100 33
        metA 2315819 .. 2315832 +  -2.4  -4.41616   TCCGATTGTTTCAGA               GGTA ACTCAG TACC                TTTATTTAAAAAGCT  59 411
HC662_RS11450 NONE
HC662_RS11455 2317280 .. 2317299 + -13.6  -3.71107   ATGACGACAAATAGA            GGAGAGGC ATTT GCCTCTCC             TATTTGATTTTCATC 100 50
HC662_RS11465 2317901 .. 2317933 + -20.9  -3.86776   CTTGATGAATTCAAA      GAATAAAAACCGCAG CTT CTGCGGTTTTTATTC      TTTAGTGATTGGTTA 100 20
HC662_RS11480 NONE
HC662_RS11485 NONE
        sspL 2320405 .. 2320418 +  -3.1  -5.26316   TTCGTATTCACGAAT               CAGTT TGTA AGCTG                TTTTTTCTCCAATCC  75 301
        kduI NONE
        kduD 2336713 .. 2336726 +  -2.4  -4.43879   AAGTATCGCTCATAG               GAAG CCAACA CTTC                TTTTGCTTGCGTCAT  59 193
HC662_RS11665 2353867 .. 2353884 +  -4.2  -4.18506   TCATTCCATTTTTCA             TGAAAG CTCGTA CTTTCA              TTCTTTTGGACATCC  61 409
HC662_RS11850 2385567 .. 2385590 +   -14  -4.04579   ATCATAAAACAAAAA          GCCCAAAACT CATA AGTTTTGGGC           TTTAATATTTATCGC 100 34
HC662_RS11940 2402015 .. 2402030 + -10.4  -5.40004   AGAAGTAACAAAAAA              GCTCCC CAAA GGGAGC               TTTTTTCATTTAATG 100 39
HC662_RS11950 2404693 .. 2404712 + -10.8  -5.97979   CCATAATCAAAAAAA            CTCAAGCT GTAT AGCTTGAG             TTTTTTTATTGTTCT 100 35
HC662_RS12030 2419414 .. 2419437 + -16.8  -3.60395   AACGGAGAAAAAAAA          GCAGAGGCTG ATTG CAGCCTCTGC           TTAATTATTGTATGA 100 15
HC662_RS12075 2426192 .. 2426212 +  -7.6  -4.68724   ACGTCTTTTTGTTCA           CCGCCTCGA GCAC TC-AGGCGG            TTTTCTATTGGATCA  83 87
HC662_RS12085 2427836 .. 2427875 + -13.8  -3.66424   AATTGTTTCTATATT  CAAATAAAAAAGCGCCGA GAAA TCGGCGCTTTTTTATTGC   TTTACACTCGTTTTA 100 19
        ansR 2448265 .. 2448286 +  -5.3  -3.19107   AAAGTACAGGAGGAA           C-TGAGTTAA TTT TTAACTCACG           GTTTAATTTTTCCGT  54 17
        mciZ NONE
HC662_RS12225 2451188 .. 2451210 + -14.9  -4.69415   CTCATAACAGAAAAA           CCAGCACCC TGTAT GGGTGCTGG           TTTATTTATATTGAT 100 34
HC662_RS12235 2452522 .. 2452547 +  -9.8  -4.37711   CAACAGAATAAAAAA         GCGAAAG-GCC CCTTC GGCTCTTTCGC         TTTTCCATTTCATAA  89 30
HC662_RS12275 2457184 .. 2457197 +  -9.5  -3.27525   CTGTCAGTTCTTTCA               GCCGC TGAT GCGGC                TTCCCTTTGAAAACA  75 85
HC662_RS12285 NONE
HC662_RS12290 2459183 .. 2459195 +  -2.6  -2.56914   ACGATTAACCGCTTG                GGGC AGCGA GCTC                TACCTTAATCCGGTC  41 33
        mifM NONE
        yidC 2467612 .. 2467637 + -11.2  -5.47431   GGTGAAATAATGAAA         CAACCCCGAGC AAAAA GC-CGGGGTTG         TTTTTTGTATCTTAC 100 31
HC662_RS12340 2468504 .. 2468528 +  -7.9   -4.9251   GAATGCAAGAAAAAA         CCCGA-TGCG GGCAAG CGCACTCGGG          TTTTCCTTTTTTATT  86 39
      prli42 2472164 .. 2472174 +  -5.4  -4.62069   TTCCCCTTCAGGCGT                 CAGA TCG TCTG                 TTTTTCCGGTCGCCA  74 397
HC662_RS12395 NONE
         bmr 2478701 .. 2478731 +  -8.4  -4.29119   AGCACGTGATAAAAA       GCGTATTCTTTGTG TAC TGCAAAGAATGTGC       TTCTTTATTATACTG  82 32
HC662_RS12450 2490128 .. 2490145 +  -8.3  -5.14563   GATAGCTGCAAAAAA             GCCGGAG AACG CCCCGGC              TTTTTTGATCAAAAC  91 36
HC662_RS12505 2500469 .. 2500486 + -11.3  -5.00895   AATATTTTAAAAAAA             GCCCCTT GTAT AAGGGGC              TTTTTCTCTAATCAA  93 61
HC662_RS12590 NONE
HC662_RS12595 2516067 .. 2516085 +  -9.6  -6.19302   CTGTCCGTCTTTTAC             CTAGCTCT ATC AGGGCTAG             TTTTTTTTGTTGTGT 100 66
HC662_RS12615 2518966 .. 2518987 + -13.1   -5.4433   AGTAATAAAGCAAAA           CAGCTGTCT GTAT AGACAGCTG            TTTTTATTTATCTCT 100 36
HC662_RS12635 NONE
HC662_RS12640 NONE
        sinI NONE
        sinR 2526569 .. 2526603 + -13.8  -4.71426   AGAAAATCCCAAAAA    GAGGAGT-AGTGCCT GAGCAG AGGCACTTACTCCTC     TTTTGTTAATAAACG 100 17
HC662_RS12670 2529742 .. 2529752 +  -2.4  -5.69068   CTGCTTTATTCTGTC                 CAGC GCA GCAG                 TTTTTTCTGTTTTTG  84 327
HC662_RS12730 2536769 .. 2536797 + -11.1  -4.08945   ATTGAAGTTAAAAAA        GCTGAATAGCC CGATGGT GGCTGTTCAGC        TTTTCCCAGAATAAT  86 17
HC662_RS12740 2537852 .. 2537890 + -13.3  -4.77036   TGAACAGGTGAAAAA   CCGAAGATAAGCTGATT CATAT AATCAGCGGATCTTCGG   TTTTTCATCATGCAG 100 41
HC662_RS12750 2538762 .. 2538786 +   -13  -5.44119   CATTAAATGCAAAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA 100 35
HC662_RS12760 2539756 .. 2539785 + -12.3  -5.16841   ATCCAACCGCACATT       AAAACCTGTATCC GATC GGATACAGGTTTA        TTTTTATTGCTATAA 100 24
HC662_RS12825 NONE
HC662_RS12830 2551056 .. 2551074 + -13.2  -5.27335   AACACGATAAAAAAA             CAGGCTGA CTG TCAGCCTG             TTTTTATTTACCCAA 100 31
HC662_RS12880 2561457 .. 2561476 + -12.2  -5.20781   GCTGCTGCATAATCT            GAGACTGC CTTC GCAGTCTC             TTTTCTTTTGTCATG 100 29
HC662_RS12885 2561885 .. 2561895 +    -4   -3.9009   TCGGCGAAGACACTG                 TTAC AAT GTAA                 TTTGTAAAATAAATT  57 63
        ispG 2563089 .. 2563125 + -16.2  -3.02511   AACTAAAAGAAGAAA   CACAAAAAGCTTGACGG GAAC CCGTCAAGCTTTTT-TG    TGTTAGAAAAATGGA 100 12
HC662_RS12900 2564231 .. 2564261 + -18.5  -2.62933   TACGTGTCAATAACT       GAAAAAGGAGCCC AACCG GGGCTCCTTTTTC       TCATATAAGCAATTA 100 24
HC662_RS12915 2566106 .. 2566123 +  -6.9   -5.5353   TACAAGCTGAAAAAA             CGGGGGA TAAG TCCCCCA              TTTTTTATTGCTGTA  93 31
HC662_RS12930 2569299 .. 2569314 +  -6.1   -5.1167   GAATGCAAGAATAGA              GCCGT TTGATT ACGGC               TTTTTATATTGCCTT  80 86
HC662_RS12935 2570301 .. 2570321 + -11.2  -5.61596   AGTAAAAGCAAAAAA            CTGAGGCT GTTAA AGCCTCAG            TTTTTTTATAGAAAT 100 22
HC662_RS13065 2594468 .. 2594489 +  -8.7  -4.74103   CAGCTAAATAAAAAA           CCGGTACAT GTAA ATGCACCGG            TTTTTAGATTAAGAA  88 30
        rpsT 2608907 .. 2608928 + -10.9  -5.77856   TGCATAATATAAAAA           CGATCCTCA ATGA TGGGGATCG            TTTTTTTCATTTCTT 100 34
HC662_RS13145 2610334 .. 2610355 +  -8.7  -5.31059   AACAGCGACTGCCCG           GGCTGCTGA TTTC TCGGCAGTC            TTTTTTAGTTCGTCT 100 39
HC662_RS13165 2614910 .. 2614931 + -11.7  -4.78149   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGACTTCTGCG 100 83
HC662_RS13210 2620713 .. 2620724 +  -4.4   -4.3739   ACATGTGAAGCGCCT                CCTT TAAT AAGG                 TTTTCTAACAGCCTA  66 306
HC662_RS13225 2623330 .. 2623355 +  -3.2  -5.71712   GAAAGTGCAAAAAAA         ATAAGGTGGC CTGTTC GCCCCCTTAC          TTTTTTTCTGTCGCA  88 22
HC662_RS13235 2625289 .. 2625308 +  -9.3  -3.83844   AGGATCGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTGATTACTGCA  79 31
        sigK 2627084 .. 2627104 +  -9.7  -2.87463   TTACCTTCATAAAAT            GCATCACCC CTT GGGTAATGC            TATGTAAAGGCGGTT  74 460
HC662_RS13260 NONE
HC662_RS13320 2638522 .. 2638552 +  -9.9  -3.85209   TGTCTTAAAGGGCTA       GTAAAGGGATTCT CAACA GGAATTCCTTTAC       TTATTATACCTTACT  81 81
HC662_RS13330 NONE
HC662_RS13335 2640150 .. 2640176 + -13.1  -3.31269   TCTTATTGAACTAAA         GGGGAATCCAT AAATA ATGGGTTCCCC         TTAATATACTATGGA 100 94
HC662_RS13350 2642818 .. 2642833 +    -9  -3.88062   ACATCAATAAAAAAC              CCCTCT ATTA AGAGGG               TTTAATCTGATCTGT  79 352
        phrE 2644674 .. 2644689 +    -9  -5.42164   TTCTGATTCCCTTTA              GCCGTT TCAT AACGGC               TTTTTCTTATTTCTA 100 59
HC662_RS13370 NONE
HC662_RS13375 2647517 .. 2647536 +  -7.2  -5.72053   TAATATTATAAAAAA            GGC-CTCTT GAA AAGAGAGCC            TTTTTTATTTCATTA 100 38
HC662_RS13400 NONE
HC662_RS13405 2652021 .. 2652058 +  -4.2  -4.51699   TACCTAAATATAAAA   CCTGTGTCGTAGATAT CTAGTA ACATCTTTGATACAGG    TTTTATACTCCTTCT  66 73
HC662_RS13415 2654040 .. 2654050 +  -6.8  -4.80882   ATATATCCGGAAACT                 GCTC TTT GAGC                 TTTTTCGTGTCAACT  79 483
HC662_RS13440 2657292 .. 2657313 + -11.7  -4.77567   ATTTCACTAAAGGGC           GCGATTCTT TAAT AAGAATCGC            TTTTCTTATAGAACT 100 55
HC662_RS13465 2661840 .. 2661876 + -15.5  -3.33815   ACTCTAAAGAAAAAA    CAAAGAAGATACAAAGT ATC GTTTTGTATCTTCTTTG    TTAGTTCGAGCCCCT 100 76
        bltD 2663298 .. 2663314 +    -3  -3.60792   CTATAGGTTCTTAGA              TGGTTT CCATA AAGCCA              TTTCAAAATTAGGCA  49 35
HC662_RS13495 2667250 .. 2667279 + -10.9  -5.60993   GTATTAAAAGTATCT       GAGAGATAAGGGGA TTT TCCTCTTATC-CTC       TTTTTTTGTGGACAA 100 34
HC662_RS13500 2667674 .. 2667697 +  -2.4  -2.51535   TGTTTAAAGTATTAT          TAATTAGTCC ACTT GGACTAAAAA           CTCATTTTATACTCA  39 50
HC662_RS13505 2667889 .. 2667919 +  -9.1  -4.88495   TTACCCCATATCAAT       CAGACGCCATAAG AAATC TTTATGACGTCTG       TTTTGTTATGTGTCT  91 50
        nikA NONE
        nikB NONE
        nikC NONE
        nikD NONE
        nikE 2677948 .. 2677958 +  -3.2   -5.2112   TAGATATAGCATTCC                 CGGT TTC ATCG                 TTTTTTCATGATATT  75 53
HC662_RS13585 2683539 .. 2683559 +  -8.4  -4.39318   CTGCAAATAAAAAAA            GATACCAA CATCT TTGGTATC            TTTTAGATTTAGTTC  83 236
HC662_RS13595 2685163 .. 2685186 +  -8.2   -4.8048   ATAAATAAAACGAAA          GCACTGATGA AATG TAATCAGTGC           TTTTTGATATGGCGA  87 37
HC662_RS13600 2686185 .. 2686216 +  -4.6   -5.5353   TCTTAAAATAAAAAA      GAAACTT-TGGATTT TGT GAATCCGCAGGTTTC      TTTTTTATTCATCTA  84 97
HC662_RS13625 NONE
HC662_RS13630 NONE
HC662_RS13635 NONE
HC662_RS13640 NONE
HC662_RS13645 2691776 .. 2691815 +  -9.3  -3.68962   GACAATGATTGATTT  GCTGAGGAACAGTCTTG ATTGAC CATAACTGTGCCTCAGC   TTCTGTATGTTAAGA  78 43
        yraA 2693371 .. 2693395 + -15.8  -5.40072   TTGAAATAATGAGAA          GGCACAGACC GTTTG GGTCTGTGCC          TTTTTTTAAGAGAAA 100 32
HC662_RS13700 2703534 .. 2703558 + -10.1  -5.36441   TGAAATAACAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTTGTATGCGCC 100 33
HC662_RS13710 2705247 .. 2705270 +   -14  -5.00642   GCAATAGTATAAAAA          CATGGCTTGT ATCA ACAAGCCATG           TTTTTATATGCATTC 100 42
        sigV 2705916 .. 2705930 +    -5  -3.18264   GCGCATTCAGTTGAC               GAAGGA GGA TCTTTC               TTAATGGATAAGAGA  52 7
HC662_RS13720 2706801 .. 2706822 +  -4.5  -4.72127   CGATAATATAAAAAA           CATCCAT CTCATATC ATGGATG            TTTTCTCTCTTCTCT  71 35
HC662_RS13725 2708799 .. 2708809 +  -5.4  -4.85599   GTCTTATTGTCCAGG                 CGAT GAA ATCG                 TTTTTGTAAGATAAG  76 6
HC662_RS13730 2709472 .. 2709497 + -12.6  -4.51301   TCATATGCAAAATAA         CCCCGCCATT CTGATT GATGGCGGGG          TTTGATTTTTTATTA 100 240
        fdhF NONE
HC662_RS13775 2720283 .. 2720306 +  -8.9   -5.5112   AAAAATAACAAAAAA          CAGCCATCG CTGAGT TGATGGCTG           TTTTTTATTCGTCGG 100 33
HC662_RS13805 2724506 .. 2724538 + -19.3  -4.88646   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT CTA ATCCGGCTGCTTTTG      TTTATTTTAATTTTT 100 28
HC662_RS13875 2738777 .. 2738807 +  -2.6  -4.69214   AGAAATGGGGGAACT       TGTATGAAAAAGAT TTT ATCTTTAGCATTCA       TTTCTTTATTCGCTG  65 44
        glnH 2739610 .. 2739638 + -13.2  -3.73224   TGAATAACGACCATC        CCGGGATGAGCA GGTGA TGCTCATCCCGA        TTTGATAAGGAGTGA 100 34
HC662_RS13885 NONE
HC662_RS13890 2740990 .. 2741011 + -11.7  -4.66833   GGCAAACATAGAAAA           GGATACTCT TCGG AGAGTATCC            TTTTTCGCATTAAAA 100 30
HC662_RS13935 2749281 .. 2749302 + -13.1  -5.43866   AAAATAAGACAAAAA           CAGCCTTGA TGAC TCAAGGCTG            TTTTTTTACGGGTTA 100 34
HC662_RS13965 2755722 .. 2755737 + -10.4  -5.80951   TTTCCAATAAAAAAA              GCTGCC TCTT GGCAGC               TTTTTTATTTTGAAT 100 31
       spoVB 2767170 .. 2767191 +  -2.2   -4.5366   TAATAATGGTCGGCT           TTCCGTCA AGAAGC TGGCGGAC            TTTTCGGTTTTTTAA  61 409
HC662_RS14020 2768038 .. 2768059 +  -8.7  -5.99154   CTTCCACATAAAAAA           GAGCGGG CTCACTCA CCCGCTC            TTTTTTTGTTTGCTA 100 30
HC662_RS14070 2776429 .. 2776465 + -14.6  -4.42594   GAAAATATTCTTAAT   TCGA-AAAGGCAGCCGC TCAA GCGGCTGCCTTTGTCCA    TTTATATTTACTTTC 100 27
HC662_RS14080 2777242 .. 2777274 + -11.4  -4.69622   GTTTGCCTCTGTAAG      AAAAACGCGGCGTA ATCGA TATGCCGCGTTTTC      TTTTTCCCCTTCTCT 100 160
HC662_RS14085 2778868 .. 2778892 + -11.4  -5.24531   TTGAATATACAAAAA          CCGGCCCGAT ATGAC ATCGTGCCGG          TTTTTTATAAGCGGT 100 37
HC662_RS14120 NONE
HC662_RS14125 2787065 .. 2787078 +  -5.2  -5.71983   TAAAGACTAAAAAAA               GCCC TTTATT GGGC                TTTTTTTATAATTGG  93 31
HC662_RS14150 2790641 .. 2790662 +  -5.8  -5.12617   ATATTGCAAAAAAAA           CTCCAGTC ATCATC GACCGGAG            TTTTTTGAATCATTA  80 112
HC662_RS14235 2805766 .. 2805778 +  -4.9  -5.55695   AAGACGTGGACTCGT                TTTCA GCC TGAAA                TTTTTTCTCTTGTTC  85 61
HC662_RS14280 2816229 .. 2816253 +  -8.7  -4.66264   TGAAAAAAGACAAAA          TCCTAAAACTA AAA TCGTTTTAGGA          TTTTTCAACATTTTA  86 192
HC662_RS14350 2834533 .. 2834555 +    -7  -6.02546   AAAGAAAACCACAAG           GGGCCGAA CATCTAT TTCGGCTC           TTTTTTTTGCTTTGA 100 39
HC662_RS14355 2835178 .. 2835216 +  -8.4  -5.56264   AGGCATTTTTTATGA  GGGTAGATAAGTGCAGA GGGTGA TCTGT-CTTATCTATCC   TTTTTTGTCTTTCAC 100 40
HC662_RS14360 2836189 .. 2836212 +   -14  -5.50723   ACCGACAACAAAAAA          CCTCAAATCC TTAA GGATTTGAGG           TTTTTCTTTTAGTAC 100 50
HC662_RS14425 2845889 .. 2845933 +   -19  -2.71364   ATGAAAGACCCAGTG TAATCAAAAAAGGCGGTGACT GCAT AGTC-CCGCCTTTTTTGATTG TCATTACACAGCTGA 100 23
HC662_RS14500 2863406 .. 2863427 + -13.1  -5.46657   CGTTCATAGAAAAAA           GCTTGCAGA TAAA TCTGCAAGC            TTTTTTATTAGCCTC 100 32
HC662_RS14515 2867636 .. 2867648 +  -3.3  -3.57615   ATCTGCTGTCCGAAT                CATCG TGC CGAGG                TTTCCCGGATCTTGA  51 476
        sspI 2868343 .. 2868360 + -10.5   -5.9218   CAATAAGACATGAAA             CCGGGTG ACAG CGCCCGG              TTTTTTTCTTATATA 100 35
HC662_RS14530 NONE
        glcD NONE
HC662_RS14540 2872359 .. 2872383 + -13.7  -3.89957   AAACATCATAAGAAA          GCCCAAAACAG AAA TTGTTTTGGGC          TTGTTCGTTATTCCA 100 30
        ysdB 2890171 .. 2890198 + -12.1  -4.87665   AAACTCGCAAAAAAA        GCAGAAGAGCG CTAAAA CGCTTTTCTGC         TTTTTATAAATCAAG 100 11
HC662_RS14670 2896880 .. 2896909 + -15.2  -5.57729   TAGAGAAATAAAAAA       GAGCATGATCTC TTCAAT GAGATCATGCTC        TTTTTTATGTTATTT 100 30
HC662_RS14720 2907667 .. 2907685 +    -3  -3.53012   GATGGAAAAACGAGA             TCGGCAGG CAG CCTGACAA             TTTCAAAGGAGGAAA  47 10
HC662_RS14725 2908557 .. 2908577 + -14.1   -5.1523   TTTTTAATGAAAAAA            CACCGTTCA TAT TGAACGGTG            TTTTTGTATTATGAC 100 34
        ytvI 2921948 .. 2921973 +  -2.5  -5.68438   TTCAGCAAAAATAAA         AAGCAGCCCATG TTG CATGG-CTGCCG         TTTTTTATTTGATGA  85 27
        ytrH NONE
        ytrI NONE
HC662_RS14830 2933539 .. 2933576 +    -8  -3.72678   ATCCCCGTCACAGAT  GAACACTAAG-AGAGAGGG TCT CCC-CTCTACTT-GTGTTC  TTTACATAATGTTTC  72 17
HC662_RS14840 2935385 .. 2935401 +  -6.6  -4.72986   AACACGTCTTGGCGG              CTGATC ATGCC GATCAG              TTTTTGGTGGCCGTC  78 471
HC662_RS14875 2941412 .. 2941436 + -11.5  -4.17089   CCCAAAAATAAAAAA          CATCTCCTGAT CAA ACCAGGAGATG          TTTTCACCGTTTAAA  90 59
HC662_RS14895 2944705 .. 2944734 + -13.7  -3.95378   TTTTTTATAGGAAAT       GAAAAGGACAGGC AGCT GCCTGTCCTTTTA        TTATTTCCCATATAC 100 31
        brnQ 2952347 .. 2952372 +    -9  -4.82667   TTTATAATGGAAAAA         GAGCCCGC TTATTACAGT GCGGGCTC          TTTTTCATATCGTGA  88 74
        hisJ 2955266 .. 2955286 +  -8.3  -4.99861   AAAATGAGGCAGCGG            CAGCGTTAA ATG TTCACGCTG            TTTTTCTCCTTCCTC  91 208
HC662_RS14945 2956329 .. 2956353 + -10.1  -5.92399   CACAGTAACATAAAA          GCCCAAAAC TGATATT GTTTTGGGC          TTTTTTATTTTATTG 100 33
        rpsD 2959008 .. 2959030 + -12.6  -5.69473   TAATCGTTTAAAAAA           CCCCTGCCGC TAT GCGGTCGGGG           TTTTTTTATCGTCTG 100 38
        acuA NONE
HC662_RS14980 NONE
HC662_RS14985 2965236 .. 2965255 +  -5.7   -4.5366   AACAAAGTAAAAAAA            CGACCTT CACGAA GAGGTCG             TTTTAGATTTTTTGA  72 31
HC662_RS15055 2977867 .. 2977903 +  -6.6  -4.58424   CAGAATAAGAAAAAA   GCTTGTCGATCCGAGGT AACT GCCTCGT-TCAACAAGC    TTTTATGTAATCCTA  77 33
HC662_RS15065 2979487 .. 2979510 + -12.4  -5.60689   ACAAGCGTAAAATAA          AAGCCGCTGC CCAT GCAGCGGCTC           TTTTTTATTATATCG 100 47
HC662_RS15085 2983510 .. 2983529 +  -9.3  -4.12188   TGCCGTACATGCTCA            GCCAGCT CTCCCA AGCTGGC             TTTTCGACGTAGTGG  79 196
        cysK 2990053 .. 2990088 + -15.6  -4.15106   TGGTCATTTGTTTAA    AAAAAGGACTGGCTTC AGAA GAAGCCGGTCCTTTTA     TTTTGCAAGTTCGTA 100 26
        pbuO 2992886 .. 2992906 + -11.2  -5.36441   AACACATACAGAAAA            CCCAAACG CCAGC CGTTTGGG            TTTTTTATGTAAACC 100 39
HC662_RS15140 2995378 .. 2995398 + -12.6   -5.2189   TGCTTATAAATAAAA            CCCCGCAT TCGGT ATGCGGGG            TTTTTTCATGCTTGC 100 119
HC662_RS15155 2999358 .. 2999380 +  -5.6   -2.7185   CCGCATTCATGTTAG           GGTGAGAC TTGTTTT GTTTCACC           TGATTGCGGGGTAAT  51 89
        opuD 3001029 .. 3001054 + -16.3  -5.28942   CTTATTAACAAAAAA         GATCTTTCCGC GCCC GCGGAAAGATC          TTTTTATTTGCGATA 100 33
HC662_RS15195 3008426 .. 3008450 +  -9.4  -4.64144   GAAGCATGTAAAAAA         CCCAAAACCGC TCGC GCG-TTTTGGG          TTTTTCCAAGTTATT  88 30
HC662_RS15255 NONE
HC662_RS15260 NONE
HC662_RS15265 NONE
HC662_RS15270 NONE
HC662_RS15275 3025393 .. 3025414 + -10.2  -5.52347   AATACAAATAAAAAA           CTAGGGGA CCGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 30
HC662_RS15295 3030207 .. 3030229 + -11.3  -4.77165   CCGATCATGTAAAAA           GATCCCGCT CATCC GGCGGGATC           TTTTATTATGAAGAG  91 29
HC662_RS15305 3032371 .. 3032389 + -13.2  -4.55826   AACGATAAACAAAAA             GCTCCAGA AAC TCTGGAGC             TTTTGCTGTTTTACA 100 33
HC662_RS15370 NONE
        mraW 3044530 .. 3044554 + -11.6  -5.67283   GCCATCGAAAAAAAA          GCTCAAATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAGTT 100 8
HC662_RS15390 3047067 .. 3047089 +  -6.3  -4.78661   AATAACCATCGTTTA          CCCGGAC-GT AATG ACAGTTCGGG           TTTTGATTTTTCCAT  77 88
        pckA 3054126 .. 3054155 + -13.7   -4.4078   CTCGTTTAGAAAGCA       AAAGCCAAGAGCA ATTA TGCTCTTGGCTTG        TTTTAATTGACAGAA 100 32
HC662_RS15425 NONE
HC662_RS15430 NONE
HC662_RS15435 3057968 .. 3057985 + -12.7  -4.88407   CAGGACATAAAAAAA             CCCGGCA CATG TGCCGGG              TTTTTCATTCGATCC 100 31
        ytzI 3060026 .. 3060040 +  -6.4  -5.58454   TTGGACTTTTAAGGT               CGGCAT GCT ATGCTG               TTTTTTTGCTGTGAC  91 94
        yidD 3061420 .. 3061450 +  -7.7  -3.67188   AACATTTTCCGGGAA      CAGCGGATGATGTT TTAT AACATC-TACGCTG       TCTTTTACACTAGCT  69 109
HC662_RS15485 NONE
HC662_RS15490 NONE
HC662_RS15495 3065103 .. 3065129 + -13.8  -4.21827   GATTTGTAATCAAAA         GAAAGAGCTGCC TCA GCCAGCTCTTTC         TTTTCGCATGTTTAA 100 32
HC662_RS15550 3077771 .. 3077793 + -14.2   -4.4595   ATCTCCACGCTGATT           GAACCCCCGA TTA TTGGGGGTTC           TTTTACGTTTTCTGC 100 24
HC662_RS15555 3078359 .. 3078375 +  -9.4  -4.63527   CTGTGAACAAAAAAA              GCCGCT TATAC AGCGGC              TTTTTCACATCATCG  88 35
        thiT 3094689 .. 3094717 + -20.4  -5.62045   CAGAGCTTAACGTGA        CAACCCCCAGCG CAATC CGCTGGGGGTTG        TTTTTTGTTATCTGT 100 31
HC662_RS15725 3097984 .. 3098018 +   -21  -4.59424   GAAATTAAAGAAAAG     GTAGAAAGGGTCTGAT TTG ATCAGACCCTTTCTGC     TTTTCGTTTGACTTT 100 11
        gbsR 3102107 .. 3102148 + -13.9  -4.17417   CGATCGAAACAAAGT AAAACAAAAAAACGCCTGG GAAA CCGGGCGTTTTTTTGTTCG  TTTATATGTAATTAC 100 24
        bslA 3102869 .. 3102886 +  -9.1   -5.2696   GCAACTAATCTAAAA             GACCGGT TCAC GCCGGTC              TTTTTTGCGTTTTCA 100 33
        ktrA NONE
        ktrB 3105251 .. 3105271 +  -9.7  -5.71983   GATGATAACAAAAAA            TCCGGCG ATTTAGG CGCCGGA            TTTTTTTATGATTCG 100 36
HC662_RS15780 3109470 .. 3109490 +  -9.8  -4.81851   AATGAACAGAAAAAA            TAAGGCTC CAAAA GAGCCTTA            TTTTTCGGTTTACAT  91 283
        iolU 3112762 .. 3112789 +  -9.9   -5.4505   TCAAGCCTAAAAAAA       TCCGCCCGCGTGC TAAT GC-CGC-GGCGGA        TTTTTTATTAGACAA 100 31
HC662_RS15850 3128202 .. 3128230 +  -8.9  -3.66424   ATCGTCCGCTAAAAG       CCCCATCG-CCT ATTTCC GGGACGATGGGG        TTTCAAATGCTTTTC  74 29
        mstX NONE
HC662_RS15895 3135822 .. 3135849 +  -9.2  -3.50251   GTGATCGTATTCCCA        GCCGC-CGTTTAT CAC ATAACCGAGCGGC        TTCATTACTTGTTCC  72 331
HC662_RS15925 3140942 .. 3140974 + -19.5  -3.08679   GCTGAAAAAAGGAGA      CAAAATCCCAAAACA AAG TGTTTTGGGATTTTG      TATTAAATCAAAAGC 100 192
HC662_RS15945 3144260 .. 3144274 +  -7.1  -5.02074   TAAATAACAAAAAAA               CCGGT GTAGA ACCGG               TTTTTTAAGGCGTGC  85 34
        patB 3145798 .. 3145831 + -11.2   -3.8709   GTAAATATAGCTGTT     GAACGCCTTTAC ATCTTCATTC GTAAAGGCGTTC      TTTATAAAGGAATTT  84 37
        kinB NONE
        kapB 3147632 .. 3147653 +  -6.6  -5.53288   TTTAACCGGCCATAA           CCCAGTCT GACAAA AGATTGGG            TTTTTTTAAGTTGCG  90 26
HC662_RS15980 NONE
HC662_RS15985 3151615 .. 3151626 +  -3.6  -3.62597   CATCTGGAAAGGAAC                GCTG CAAA CGGC                 TTATTAAAGAATCGG  53 7
HC662_RS15990 3152077 .. 3152104 + -17.2  -3.54771   CCGTAAACGAAAAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 35
        maeL NONE
        maeM 3155126 .. 3155152 + -13.8  -5.40625   AATTTCTATAAAAAA         CTGCACTGTTCA CTC TGAGCAGTGCGG         TTTTTTCTGTCATAT 100 30
        nupN 3156684 .. 3156710 +  -8.1  -4.82111   TGAATAAGAATCGCA         GGGATAAGG AGGTCGAGC CCTTATCCC         TTGTTTTTCTTTTAT  87 34
        nupO NONE
        nupP NONE
        nupQ 3160290 .. 3160316 + -13.8  -5.31275   AACGATAAACCATTC         TCCCTTGGGAAG ACG CTTCTCAGGGGA         TTTTTTCTAATCCAA 100 33
        maeN 3161793 .. 3161815 +  -9.9  -5.80248   TCATAAACAGAAAAA           GAGTTCCGT CATAT GCGGAACTC           TTTTTTTATCTGTTC 100 35
HC662_RS16040 NONE
HC662_RS16045 NONE
HC662_RS16050 NONE
HC662_RS16055 NONE
HC662_RS16060 NONE
HC662_RS16065 NONE
HC662_RS16070 3168041 .. 3168066 +  -7.6  -6.08342   ACTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG 100 33
HC662_RS16105 3173228 .. 3173263 + -12.7  -3.03348   CTGACCGACAAACAC    CGAAAAGACCGCAAC GCTAAA GTTGTGGCCTTTTCG     CTTTGTCATATTCGG  91 37
HC662_RS16110 3173958 .. 3173968 +  -4.6  -4.82901   ATAAGAAGCAGGCTG                 CGGC CGG GCTG                 TTTTTCTCGCCAGCA  73 286
HC662_RS16150 3179859 .. 3179881 +  -2.7  -4.72272   CGCTTAACTGAAAAA          TAGGACGTCC CGAT GTACG-CCTA           TTTTTCATGCGCAAG  65 23
        adeR 3193887 .. 3193916 + -16.7  -6.17669   TATCAAGCTTCGGCA       CATGGATTTGTGA AATT TCACAAATCCATG        TTTTTTTATTTTCTT 100 13
         ald 3195148 .. 3195171 + -11.8   -5.9362   CTTAATTCACATTGA          GCTTGCAGAA AGAT TTCTGCAGGC           TTTTTTTATCTTTTA 100 36
HC662_RS16210 3195941 .. 3195960 + -12.2  -5.27923   CGTAAGATAGAAAAA            GAGACTGC GGCT GCAGTCTC             TTTTTTATGCGATTA 100 36
HC662_RS16255 3210592 .. 3210613 +   -13   -4.8048   CCATAATGAGAAAAG           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 67
HC662_RS16270 3214229 .. 3214260 +   -16  -3.95674   TTACTTTTTCATGTA      AAAAACGCTCCAGC AGTT GCTGGAGCGTTTTA       TTCTTTCACAGTTTT 100 25
HC662_RS16295 3218268 .. 3218293 +  -9.1  -5.95539   TAAATAATAAAAAAA         GGAGTTTGTGTC AAC GACACA-GCTCC         TTTTTTTATTTGAAG 100 34
        guaC 3219709 .. 3219741 + -18.6  -4.01135   TTAATAATACAAAAG     CGCCAAGTC-AGCGG TTTT CCGCTTGACTTGGCG      TTTACTGTTATTAGC 100 37
HC662_RS16340 3225849 .. 3225867 + -13.2  -4.42386   AATTATAGAGAAGAA             CCGCTGAT CAT ATCAGCGG             TTTTCTGCATACCCA 100 39
HC662_RS16350 3226618 .. 3226645 + -15.7  -6.07627   TCTTTTAATAAAGCA        GCCAGGCTGAT ATTTCC ATCAGCCTGGC         TTTTTTTTTAGAGAT 100 33
HC662_RS16380 3233893 .. 3233913 + -10.3  -5.14477   CGGCACACAGAATAA            GGGCACCCT TTT GGGGCGCCC            TTTTTTAAATGTATG  93 26
HC662_RS16400 3236179 .. 3236195 + -12.3  -4.22338   CAGGAATGACAAAAA              CGCCAGA TGA TCTGGCG              TTTTGGCATTATGCT  95 16
HC662_RS16410 3238307 .. 3238339 + -13.5  -2.66808   AGAAAAAAGAAATAA      CAAAAAGCCGCCTCT TCG ACAGGCGGCTATTTG      CTGCTTTTTTCATTT  91 26
        pucR 3246255 .. 3246268 +  -2.4  -2.64472   CATTCTCTTACAAAC               CGAA TCGTTT TTCG                TCACTTTCAGCAATA  40 50
HC662_RS16455 NONE
HC662_RS16460 NONE
        pucL NONE
        uraH 3250873 .. 3250891 + -13.1  -3.13432   AAGAAAAAGGAGGAA             GCCCGCC GGTGA GGCGGGC             TTAGATGATGTTCAG  95 39
HC662_RS16480 3252105 .. 3252127 + -11.4  -3.45737   TCCTAGTTCGGCTGA           CGCCATAAGA AGT TTTTATGGCG           TTATGCTCGTGATTA  85 77
HC662_RS16495 3253374 .. 3253396 + -11.4   -4.4084   CCTGTTTGGGCTAGA           CGCCATAAGA AAT TTTTATGGCG           TTTTGCTATGTGATT 100 58
HC662_RS16510 3256095 .. 3256118 + -11.1  -4.54343   AATTTATAACCAAAA          GAACCCATC TATGAC GATGGGTTC           TTTATTTAACTTTCT  90 77
HC662_RS16535 3260708 .. 3260729 +  -3.6  -3.63511   TTTCGCATAAAAAAA           CCCCCGGT TTATTC ATCGAGGG            TATATTTTTATGCTT  53 418
HC662_RS16555 3262649 .. 3262676 + -11.4  -4.44915   AACTTCTCAGACTAA        TG-AGTCCGGCTT TAA GAGCCGGACTTCA        TTTTCTCACTGGTTA 100 26
HC662_RS16600 3272392 .. 3272413 + -14.5  -3.78775   TGGCCGTAAGAAAAA           GGTGCTCCT TTTA AGGAGCACC            TTTCCTAATACACAG 100 32
        frlR 3274547 .. 3274563 +  -9.3  -3.06133   ACACCGCATGTTTTC              GCAGCCG TTT CGGCCGC              TTGGCTCAAAGCTTG  67 141
HC662_RS16650 NONE
HC662_RS16655 3281894 .. 3281913 + -11.4   -4.9218   TCGAAGAGTAAGAAA            CCGC-GGCC CCC GGCCAGCGG            TTTTTCTCCTGCATA 100 30
HC662_RS16765 3300624 .. 3300644 + -10.4  -3.99805   TGGAACAATCATGAC            GCAGCTGC TTCTC GCGGCTGC            TTTCACTTTTTCAAG  85 27
HC662_RS16775 NONE
HC662_RS16780 3302256 .. 3302284 +  -7.6  -5.71712   CACTATCAGTAAAAG       GGATACGATGTTC TTTC GGACATC-TATCC        TTTTTTTGTGTAAAA 100 41
HC662_RS16790 3304494 .. 3304517 + -12.4   -5.9218   CCCATTAATAGAAAA          CTCCGCGGGT ACCA ATCCGCGGGG           TTTTTTTATTGTATC 100 33
HC662_RS16805 3306672 .. 3306697 + -11.2  -5.17054   CAGCATCACAAAAAA         GCAGTCTGCT CTGATT GGCAGACTGC          TTTTTTAGCTATTGT  93 12
HC662_RS16830 3311392 .. 3311416 + -10.3  -3.51015   AACTTTTCAGTTGAT          CTAAATTATAA TTA TTATAATTTAG          TATTGATTTTTAATT  81 27
        mrgA 3311948 .. 3311970 + -13.5  -4.86621   TTAGGATAAAAAAAA           GCTGAACCC TTTTC GGGTTCAGC           TTTTTGATTACCGCT 100 32
        cssR NONE
        cssS 3315666 .. 3315691 +  -7.7  -5.71712   ATAGCAGTGCCAAAA         TAGACTGTAGA TGTT TTTGCAGTCTA          TTTTTTTATGTGAAA 100 23
HC662_RS16860 3316909 .. 3316929 + -15.5   -5.7827   ACATATTTAGAAGAA            CGGCTGCTT TAA AAGCAGCCG            TTTTTTCTTTCTATT 100 31
       gerAA NONE
HC662_RS16880 NONE
HC662_RS16885 3322621 .. 3322652 +  -8.6  -4.28049   GGCTCTCCCTTGCTT      GCGGCGCGGATGGC ATCG GCGATTTCCGCCGC       TTTTGAGGTTTTCAA  79 316
HC662_RS16945 3333555 .. 3333575 + -12.6  -5.65177   GTAATATGCAAAAAA            CGCATCCG TATTT CGGATGCG            TTTTTTTATACGTCT 100 37
HC662_RS16975 NONE
        oxdC NONE
HC662_RS16985 3340010 .. 3340034 +   -13   -5.1356   TCCCAGCTAAAAAAA          GAACGCATTC CAATT GAATGCGTTC          TTTTTATTCATAGCG 100 31
HC662_RS17020 3347624 .. 3347650 +  -8.1  -4.85396   CGTTTTTATAAAAAA         GACACCTGA CAAAGCAAA TCAGGTGTC         TTTTGTTATGCTTAT  87 317
HC662_RS17035 3350237 .. 3350248 +  -4.4  -4.11692   TTTTATATGCTGTTT                CATG GGCG CATG                 TTTTAAACGTGAGTG  61 8
        modA NONE
        modB 3354720 .. 3354741 + -11.6   -4.8622   AAACACACTAAAAAA           CTCCCCGT GCCGTG ACGGGGAG            TTTTTCATTAAAACA 100 30
        yvgO 3356299 .. 3356318 + -10.7  -5.25656   CTAATATTAAAAAAA            GCTGGCG CACTAA CGCCAGC             TTTTTTGCTGCTTTT 100 37
HC662_RS17125 3373396 .. 3373417 +  -8.7  -4.87291   GAGCAATAAACAAAA           GCCTCCC CAAGGAAA GGGAGGC            TTTTTCATTAAAATG  91 32
HC662_RS17190 3384361 .. 3384377 +  -3.5  -5.59655   CATAGGAATAGAAAA              CGCTTGG CTT CCTTGCG              TTTTTTGTTACTTTA  81 36
        rghR NONE
HC662_RS17205 NONE
        catR 3386099 .. 3386120 +  -5.3  -3.89346   GAAAAGGAGCTGTTT           TTATTTTTC GAAT GAAAAATGA            TTTCTCAGCTCAGAA  63 75
HC662_RS17230 3388881 .. 3388898 +  -4.8  -3.33265   CAGTCGGGATCGCGC             CGGCCA GAATAA TGGCTG              TTCCGTTTGTCGCAT  54 144
HC662_RS17255 3393025 .. 3393045 +  -6.8  -5.55769   GAAGCCGTAAAAAAA            CGCCCTGT CTTAA ACAAGGCG            TTTTTTCTTATGCGG  90 31
        opcR 3397281 .. 3397324 + -19.9  -3.19653   AATACGTGCCTAGAA CGAAAGAAAGCAGTTCCCT GAAGTA GGGGAACTGCTTTCTTTTG TTAATGAAATTCTAA 100 0
HC662_RS17285 3398116 .. 3398142 +  -7.2  -5.40625   ACTAGCATAAAAATA         GACACAGCCTGA TAT TGGGGCCGTGTC         TTTTTTGTGTGGTAT  91 36
HC662_RS17290 3398956 .. 3398981 + -13.3  -4.17914   TTCTTTTAAAAACAA         CCCCCATCACC TGCT GGTGATAGGGG          TGTTTTTATTGAATA 100 32
HC662_RS17300 3401409 .. 3401430 + -15.9  -3.29332   AAAAGCACAAAAAAG           CCGCCGAGA CATA TCTCGGCGG            TCATTTTATTACTTG 100 39
        araR 3411647 .. 3411675 +    -9  -5.65177   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTATAGCTGT 100 31
HC662_RS17355 3414760 .. 3414782 + -12.8  -2.77227   ACAATAATAAAAAAA           CCTCTTGTCG TTG TGACAAGAGG           GTTCTCATTTACTGA  90 34
        rsbQ NONE
HC662_RS17410 3426495 .. 3426532 + -11.5  -4.78848   TTTGAAATAAAAACA   TCCATGAGACATAACAA TGAT TTGTTACATCTCATGGA    TTTTCTGTTTCAGCG 100 31
HC662_RS17450 3437364 .. 3437382 + -10.3  -4.99645   GATTCCTTAAAAAAA             TCCTCCC GTCAA GGGAGGA             TTTTATTTATACCGT  93 31
        yvfG 3438994 .. 3439020 + -11.7  -4.62203   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG 100 27
        slrR NONE
HC662_RS17545 NONE
HC662_RS17550 3457155 .. 3457188 +  -9.8  -5.72118   TCAGCAAAAAGAAAA    CCCGGGA--AAGAGAA GTAA TTCTCTTTATCCCGGG     TTTTTTCTGTTTTTT 100 8
        sacB 3463066 .. 3463104 + -14.2  -4.31433   TAACAAATAAAAACG   CAAAAGAAAATGCCGATA TCC TATTGGCATTTTCTTTTA   TTTCTTATCAACATC 100 31
HC662_RS17585 3464692 .. 3464715 + -16.8   -5.8187   TTCATGAATAAAAAA          CAGGTGCAGC GCGG GCTGCACCTG           TTTTTTTATTAGATC 100 30
HC662_RS17590 3466355 .. 3466385 + -14.3  -3.90744   ATTGATTATGATAAA       TAAAGAAGCAAGA TTTTT TCTTGCTTCTTTA       TTCTTTACAAACGCA 100 23
HC662_RS17595 3467033 .. 3467068 +  -7.1  -2.53263   AAGCTTAGGTACAGC    TTAAAAAATGACTGG GTAACA CCGCTCATTTTTTAA     TGCCTTAAAAATGAC  59 22
HC662_RS17600 NONE
HC662_RS17605 3467967 .. 3467992 + -11.9  -4.13767   ACTGTCCCATAATTT         TGCTGCATGTC ACAA GACCTGCAGCA          TTTTGCGCTGCCGCA  95 225
        clpP 3469426 .. 3469451 + -13.4  -5.72207   AGTAATACTGCGTAA         CCTGCAAGAG CGATGT CTCTTGCAGG          TTTTTTTCATTTGAA 100 36
HC662_RS17660 3477436 .. 3477469 +  -9.8  -5.72118   TCAGCAAAAAGAAAA    CCCGGGA--AAGAGAA GTAA TTCTCTTTATCCCGGG     TTTTTTCTGTTTTTT 100 8
        sacB 3483348 .. 3483386 + -14.2  -4.31433   TAACAAATAAAAACG   CAAAAGAAAATGCCGATA TCC TATTGGCATTTTCTTTTA   TTTCTTATCAACATC 100 31
HC662_RS17695 3484974 .. 3484997 + -16.8   -5.8187   TTCATGAATAAAAAA          CAGGTGCAGC GCGG GCTGCACCTG           TTTTTTTATTAGATC 100 30
HC662_RS17700 3486637 .. 3486667 + -14.3  -3.90744   ATTGATTATGATAAA       TAAAGAAGCAAGA TTTTT TCTTGCTTCTTTA       TTCTTTACAAACGCA 100 23
HC662_RS17705 3487315 .. 3487350 +  -7.1  -2.53263   AAGCTTAGGTACAGC    TTAAAAAATGACTGG GTAACA CCGCTCATTTTTTAA     TGCCTTAAAAATGAC  59 22
HC662_RS17710 NONE
HC662_RS17715 3488225 .. 3488250 + -11.9  -4.13767   ACTGTCCCATAATTT         TGCTGCATGTC ACAA GACCTGCAGCA          TTTTGCGCTGCCGCA  95 201
HC662_RS17785 3502265 .. 3502281 + -11.5  -5.45726   GCATGCATAAAAAAA              GCGGCCG CAT TGGCCGC              TTTTTTTAACCTGTG 100 31
HC662_RS17800 3505871 .. 3505891 + -15.5  -3.94184   TCAATAAATCAAAAA            TCCGGTCTG ATC CAGACCGGA            TTTCATATTACATAT 100 34
HC662_RS17825 3510814 .. 3510834 + -11.2  -4.74103   TGTTCATAAGAAAAA            GCTTGCAG ACATG CTGCAAGC            TTTTTACGTTACAAA  91 32
HC662_RS17920 3529970 .. 3529980 +  -3.2  -4.98255   AATTGTCTTTACTTT                 CAGG CTG TCTG                 TTTTTATGATTAAAG  69 157
HC662_RS17925 3530768 .. 3530792 + -11.5  -3.16872   TTTTAAAATAAAAAA          TCCCGCTGA TGTTTAT TCAGCGGGA          CTTTTCAATCTTGCT  83 35
        nagA NONE
        nagB NONE
        nagR 3537574 .. 3537584 +  -3.2  -4.26398   ACTGGTCTGGCGCCG                 GACG ATA TGTC                 TCTTTTTTCGTCTTG  60 88
HC662_RS17980 3543861 .. 3543880 +  -4.8  -3.69602   TGAAATATTCCGCAA            GACCGCCG ATGA CGCCGGCC             ATTTTCTTGTTTTTT  59 503
HC662_RS18005 3546071 .. 3546084 +  -5.3  -2.52795   TTGCGGCTGTTGGTT               TGCTT GAGC AAGCA                TCGCTTGAGAAGCTT  47 277
HC662_RS18030 3553280 .. 3553304 + -16.5  -5.47821   TATTAATTTACATGA          GTGCCGCTGGT CCA ATCAGCGGCAC          TTTTTTTGAATGCAT 100 48
HC662_RS18035 3556070 .. 3556109 +  -8.6  -3.16564   ATCCTGCCTCTTTCT  TATACAAGCGGGGCAGGT GTAT ACTTGTCCTGCCAGTATA   TTCGTGAGGTGAAAC  70 44
HC662_RS18040 NONE
HC662_RS18045 3558068 .. 3558107 + -23.7  -4.46212   CTCAGCGTAACACAA  GACAGCCCGGCACCACA TCTTCT TGCGGTGCCGGGCTGTC   TTTTATGATCCGGAC 100 31
HC662_RS18200 NONE
        tagV 3586323 .. 3586344 + -12.3  -5.60993   TCCTATTAAAAAAAG           CCCGGTCCT TTAG AGGATCGGG            TTTTTTTGTGCAGAA 100 32
        lytR 3604233 .. 3604259 + -13.8  -5.83211   AAATAAAATAAAAAA         GAAGCTTCGCAC AGT GTGCAAAGCTTC         TTTTTTATTTTCCTG 100 35
        galU 3611579 .. 3611604 +   -12  -4.39386   AAGTTTAAATAAAAA         GGCTATTGGA CAATCA TCCAATAGCC          TTTTCCTAATTTGAA 100 33
HC662_RS18360 3625600 .. 3625614 +  -2.8   -3.0485   ATTTTGAGCTGATGA               CAGTAT GAA ATCCTG               GTTTGCGTTTTTTTA  43 117
HC662_RS18365 3626752 .. 3626778 +  -6.7   -3.0497   ACATGAGAAATCAAG         CTGATCTTTAT ATATA ATAGAGATCGG         TATTGCAAATAATAT  58 22
HC662_RS18370 NONE
HC662_RS18375 NONE
HC662_RS18380 NONE
HC662_RS18385 3631639 .. 3631662 +   -14  -6.13503   AAGATAAATGAAAAA          CACCTTTTGC AGCT GCAAAAGGTG           TTTTTTTTATTGATA 100 34
HC662_RS18405 NONE
HC662_RS18410 3639350 .. 3639371 +   -13  -5.47159   GATGAGCAATCAAAA           GGGTGCGC ATGATC GCGCACCC            TTTTTTATGTTCCGA 100 36
        tagT 3642054 .. 3642077 + -13.9  -4.77986   TAGGTGTATAATGAA          CGGGATGGC AATTAC GCCATCCCG           TTTTTACATATTTCC 100 30
HC662_RS18425 3643105 .. 3643145 +   -13  -5.44721   GAGTCTTCAAATTAA  TGACAAAATCCTAAAA CGGTTTTTA TTTTAGGATTTTGTCA  TTTTTTTAACGTGAT 100 63
HC662_RS18455 NONE
        rbsK NONE
        rbsD 3650689 .. 3650700 +  -3.6  -3.14587   ATATGCCAACTGTAT                CCTG CAGG CGGG                 TGTGCTTTTCTAGAA  48 1
        rbsA NONE
        rbsC NONE
        rbsB 3654119 .. 3654140 + -11.7  -5.56264   AAAAATAATTGCCAC           GGATCAGAT CTTT ATCTGATCC            TTTTTTATGTTTAGG 100 33
HC662_RS18485 3654760 .. 3654795 + -14.2  -3.46205   ACATGACAAAATAAC    TGAAAGGGATTCCGTG TCTA TGCGGAATCCCTTTTA     TTATGAATTGATTTG 100 27
HC662_RS18490 3655221 .. 3655244 +  -7.4  -5.07652   TTTAATCATAGAATA          GCCCTGCCGCA TGC TG-GACAGGGC          TTTTCTTTTAAGCGA  85 36
HC662_RS18510 3659870 .. 3659880 +  -3.2  -4.03234   TCACCTCAAATAATC                 CGGT TTC ACTG                 TTTCTGTACAACGCG  56 430
HC662_RS18520 3661508 .. 3661536 +  -8.2   -5.0925   ACCTTTTCGTTACCA       TAGGCTGCCG-AC AAAT GTACGGAAGCCTA        TTTTTCATTTTCCCC  91 42
HC662_RS18525 3662350 .. 3662377 + -16.4  -4.39002   GTTGCCTATAAAAAA        TAACCCCCGGAG AAAG CTTCGGGGGTTA         TTTTATGAAACATTT 100 98
HC662_RS18530 3662914 .. 3662926 +  -4.8  -4.26079   CTCCACGAGATGCCC                GCTG TCTTT CAGC                TTTTCAATGGTTTCC  67 160
        chrS 3665060 .. 3665075 +  -3.3  -3.32343   GTAAAGGAGAGAAAC              GAATG AAAAAC CATTC               TTATCGGGATATGAC  48 37
        chrB 3665650 .. 3665661 +    -3  -3.17444   AAAGGAATGTCGGCC                TCAT GATC ATGA                 TGTATGTATTTCTGG  44 20
        chrA 3666194 .. 3666209 +    -9  -5.79595   TCATTTGTAAAAAAA              GCACCT AGAG AGGTGC               TTTTTTCTTTTGGCC 100 31
HC662_RS18610 NONE
HC662_RS18615 3680207 .. 3680228 + -11.6  -5.17576   AGCGCAATAATTAAA           GCTGGCTC CTAAAA GAGCCAGC            TTTTTTCCGTTCATA 100 31
HC662_RS18640 NONE
      blaOXA 3684395 .. 3684418 + -15.4  -5.38047   TTCTGCATTAAAAAA          GACTGCCGTT AGGA AACGGCAGTC           TTTTTTCTGTAAATA 100 30
HC662_RS18665 3695844 .. 3695867 +   -11   -5.4505   TTAAAAATAAAAAAA          GACCGCCGTT TCAG AACGGCAGTC           TTTTTTATTCCGGCG 100 37
        rapD 3698375 .. 3698390 +    -4  -3.21872   GATGGTGATATTCTT              CATTGA GCTG TCGATG               TTGACTGTATTTCCG  49 382
HC662_RS18710 NONE
HC662_RS18715 3703297 .. 3703320 + -13.9   -5.1287   GCAGAATAACGCTCA          GACTGCCGG GATATG CCGGCAGTC           TTTTTTGCATATAAA 100 32
HC662_RS18745 NONE
HC662_RS18750 3710975 .. 3710996 + -13.1   -5.1287   CACTGTAATCGTTTA           GAGATTCGG AATT CCGAATCTC            TTTTTTGCGTATAGA 100 33
HC662_RS18755 3711736 .. 3711763 +  -9.2  -3.81062   CTAGAAAAGACAAAA        GCCGGC-GTCT GAATCCA AGACAGCCGGC        TTTAAAATTTTTCGT  79 37
HC662_RS18770 NONE
HC662_RS18775 3714345 .. 3714381 +  -8.8  -5.27206   GACACAAATAGCAAA    GGCATGAGTTTGGT ATTGAATGA ACCGGGCTCATGCC    TTTTTATTATGTATC 100 53
HC662_RS18780 NONE
HC662_RS18785 NONE
        pseC NONE
HC662_RS18795 3718607 .. 3718617 +    -4  -4.17048   GTGATGATGAGGTGC                 TGTT ATG AACA                 TTCTTTTCAGAACAG  59 37
        pseG NONE
        pseH NONE
        pseI 3721497 .. 3721531 + -15.8  -3.52341   AATGCCATAAAAAAA     CTGCACCCTGATCTGT CCA GCAAATCGGGGTGCAG     TTCTGGTGTTCAGCT 100 98
         cls 3723694 .. 3723714 + -15.4  -4.78107   TAAGATGTGCCAAAA            CCCCGGCC TTTAC GGCCGGGG            TTTTTCCTGATGGTC 100 38
HC662_RS18830 3725010 .. 3725043 + -13.3   -3.6849   CGTACAGCTATTAAT     CAGAAAAACCCGGAG CGGA CTCCGGGTTTTTTTA      TTATTCCGCTTCGCT 100 27
HC662_RS18945 3744533 .. 3744553 +  -9.8  -6.01369   CGATCATAAAAAAAA            TCCTTCTC TTTAT GAGAAGGA            TTTTTTTCTTATTTC 100 32
HC662_RS19045 3759335 .. 3759353 + -13.2   -4.8622   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTCATTAAAACA 100 16
HC662_RS19065 NONE
        racA 3762846 .. 3762863 +  -9.1  -5.26875   ACCTAAAGTAAAAAA             GCTCCCT TTAC GGGGAGC              TTTTTTGATTACGCA 100 35
HC662_RS19130 3774147 .. 3774176 +  -5.8  -5.87996   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAAC-GGCAAGTC       TTTTTTTATTACTTC 100 70
         cls NONE
        uvsE NONE
HC662_RS19165 3782688 .. 3782708 + -12.7  -5.19328   ACTTACATATAAAAA            GGATAGACA TCT TGTCTATCC            TTTTTCTTATGGCCT 100 40
HC662_RS19215 3795403 .. 3795426 + -16.8   -4.2123   TCACAAGATAAAAAA          CCAAGGACCG GCGG CGGTCCTTGG           TTTCTTCAGTCAATA 100 30
HC662_RS19240 NONE
HC662_RS19245 3800243 .. 3800259 +  -2.3  -3.54626   TAGAGGGGATGGTAT              TTTGTTT ATA GAGCAAA              TGTTTCCATTTATTA  48 92
        albA NONE
        albB NONE
HC662_RS19260 NONE
        albD NONE
HC662_RS19270 NONE
HC662_RS19275 NONE
HC662_RS19280 3806986 .. 3807004 +  -3.1  -2.56271   AGCTGTATAATCACT            CGTG-CGG TACA CTGTCACG             GTATTGTCGTCGGGC  40 95
        rapF NONE
        phrF 3811166 .. 3811185 + -12.2   -5.8187   ATGATTTAATGAAAA            CAACCGGT TTTT ACCGGTTG             TTTTTTTGTTAAATA 100 32
HC662_RS19305 3811909 .. 3811937 + -14.8  -4.62069   CTTTCTCAAAACAAA        GCGATCTTACAT TAAAC ATGTAAGATCGC        TTTTTAAGGTAAAAA 100 44
HC662_RS19310 NONE
HC662_RS19315 NONE
HC662_RS19325 NONE
HC662_RS19330 3815509 .. 3815531 + -16.4  -4.63932   TTAAAAGATGAAAAA           GGGCCTGAAT TAC ATTCAGGCCC           TTTTATTAAAAACTA 100 37
HC662_RS19345 3819591 .. 3819609 + -13.2  -3.33361   CGGAATCATTAAAAA             TAACCCGG CGG CCGGGTTA             TTCGTATGGTTCGTC 100 29
HC662_RS19405 3831842 .. 3831862 +  -9.6  -4.67755   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTTCCATCCCTAT  88 36
        rsfA 3840384 .. 3840409 +  -9.9  -4.13014   AATAACTTAGAAAAA         TCCCAAAACGAG CTG CT-GTTTTGGGA         TTTTCACCATGTGCA  85 36
HC662_RS19475 3845531 .. 3845551 +   -14  -5.10877   TATGTATAATATCTC            CTCCCGCC CTGCC GGCGGGAG            TTTTTCGTTTCTTCT 100 32
        bacG 3846441 .. 3846458 + -11.3  -3.00003   AAGCATATAAAAAAA             TCCCGCT TTTT AGCGGGA              TACTTCTTGTAATGA  79 31
        gerQ 3868887 .. 3868914 + -12.2  -5.72622   CAAGATAAAGAAAAA        GCCAATCGCTCAT TTG ATGAG-GATTGGC        TTTTTTATTTATAGA 100 33
HC662_RS19610 3872557 .. 3872573 + -12.3  -4.60889   TACTTAAATAAAAAA              GCGCAGA GTA TCTGCGC              TTTTTACAAATCCTT 100 30
HC662_RS19625 3875091 .. 3875111 +    -9  -5.36441   TCATAAACAAAAAAG            GCTGCCTT ACAGA GAGGCAGC            TTTTTTATATGACCG 100 35
HC662_RS19645 3879872 .. 3879890 +  -8.8  -3.00046   CTCTTTTACGTGTCC             GATCGCCC ACA GGCCGATC             TCATATTCTTTTTTA  67 494
         vpr 3883573 .. 3883594 + -17.3  -4.68506   ATTGAATAATAAGAA           GCCCTGCCG AGAT CGGCAGGGC            TTTTTCAGATTAATT 100 32
        ywcE 3888677 .. 3888696 + -12.2   -5.2015   GAGGACAGCAAAAAA            CCCTCTTC GTTA GAAGAGGG             TTTTTGTATTATTCG 100 39
HC662_RS19750 NONE
HC662_RS19755 3901812 .. 3901829 +  -7.7   -6.0427   TTATGTAAGAAAAAA             CTGTCCT CTCA AGGGCAG              TTTTTTTTATGTGCT 100 33
HC662_RS19760 NONE
HC662_RS19765 3903353 .. 3903373 +  -7.6  -5.88476   TTCTACATAAAAAAA           GCTGCTCCT GAAC AGG-GCAGC            TTTTTTCTTTATTTT 100 31
        glxA 3905078 .. 3905092 + -11.4  -6.01369   AGCGTTAAGAAAAAA               GCAGCG TAA CGCTGC               TTTTTTTATTATTTA 100 33
HC662_RS19785 3908628 .. 3908660 +   -10  -5.15969   AAAAGTAACCAAAAA      GCCTGTAAAACTTG CATTC TAAGTCTTACAGGC      TTTTTTACATTAAAA  93 33
        sacX 3910440 .. 3910457 +  -2.8  -3.26844   TTTAAAGAAGAGACA             GAATAA CTGGAT TTATTC              GTTTTCATTCATAAA  46 20
HC662_RS19795 3911357 .. 3911379 + -10.7  -5.37043   AGGCAAACAAAAAAA           CGCTTTTGA GCTGA TCAAAAGCG           TTTTTTATATCCGAT 100 40
        ywaE 3913937 .. 3913964 +  -9.9  -5.59879   GGTACCGCGTGCATT        GAGCCACGTCCC TTATC GGGATG-GGCTC        TTTTTTGTGTTTCTA 100 217
HC662_RS19815 3915251 .. 3915276 +  -7.7  -5.42862   TCTGATATCAAGAAA         CGCTTATGA CCCTTTAT TCATAAGCG          TTTTTTTGCAGGTAT 100 41
        ywaD 3916762 .. 3916780 + -10.3  -4.63527   ATATTAAATAAGAAA             GACGGCA CTTGA TGCCGTC             TTTTTAAGGTAATGA  89 30
HC662_RS19855 NONE
        dltA NONE
        dltB NONE
        dltC NONE
        dltD NONE
HC662_RS19880 3926714 .. 3926736 + -12.1  -5.56673   CGAACAAATGAACAC           GCAGGAGAA TTAAT TTCTCCTGC           TTTTTTCTTATGAAT 100 13
HC662_RS19885 3927967 .. 3927986 + -12.1  -5.09426   GTAAATAAGAAAAAA            GCCGGCC ACTGAG GGCCGGC             TTTTTTACGCTTCAA 100 33
HC662_RS19925 3936123 .. 3936143 + -10.5  -6.23317   ATTAAAAACAGCGAA            CAGGACTTT TTT GAAGTCCTG            TTTTTTTATTTTTCT 100 36
HC662_RS19930 3937887 .. 3937897 +  -2.4  -3.78394   CGCGACATGATCAGC                 GACG TTA CGCC                 TTGATTTCTTTCATT  50 494
HC662_RS19965 3941889 .. 3941911 + -12.1  -5.29445   GGGTTATCAAGAAAA           GCTGTCTTC TCTAT GAAGACAGC           TTTTTATTATTCAAA 100 10
        cimH 3950788 .. 3950817 +  -9.5   -5.1287   ATTGATACACCGCAA       GCAAGTTCTTT-GT AAA ACGAAAGAGCTTGC       TTTTTTGCATGTCCG  91 36
HC662_RS20000 NONE
HC662_RS20005 3952830 .. 3952849 + -10.7  -5.68438   TCCGGCTGTGGCGGC            GGAGGCG ATTGAG CGCCTCC             TTTTTTATTTCATCG 100 14
HC662_RS20030 3958392 .. 3958416 + -11.5  -4.62203   TTCTAAACGAACAAA          TCCCTCTGC TTCAAGT GCAGAGGGA          TTTTCATTATTTAGA 100 35
HC662_RS20040 3960371 .. 3960392 + -14.5  -3.35255   AATAATAGCTGAAAA           GGCCTTCTC TGTT GAGAAGGCC            TCTATTCTTATTCCG 100 36
HC662_RS20055 NONE
        pepT 3963655 .. 3963674 +  -7.1  -5.47218   GCGTAATGCCAAAAG            CCAGTCC AAAAAA GGGCTGG             TTTTTTTGCGTAAAA  91 35
HC662_RS20065 3964455 .. 3964474 +  -6.4  -4.84529   TATATCAAACGAAAA            GGCTGC TGAACAAT GCAGCC             TTTTTCAATTTATCA  79 45
HC662_RS20070 3965262 .. 3965286 +   -13  -5.31275   GATTTGATCGTTCAA          GCTCTTCCTT ACACA AAGGAAGAGC          TTTTTTATGCTCAAC 100 215
HC662_RS20075 3966652 .. 3966676 +   -13  -5.47159   GAGATTGTCACGCAA          GCTCTTCCTT ATCCA AAGGAAGAGC          TTTTTTATATTCGAA 100 217
HC662_RS20080 3967859 .. 3967888 +  -7.2  -5.75478   AAATAAGCCAAAAAA       CACACTTGATTC TCTAAC GGAGCAAGTGTG        TTTTTTTATGTCATT 100 35
HC662_RS20115 3975036 .. 3975064 + -13.3   -4.5774   TGTGGTAGAAACATT        GAGCCATATCC CTTTTGC GGATATGGCTC        TTTTGATTATTGATA 100 33
        citN 3979773 .. 3979809 + -14.8  -2.94099   TTATTTCGTTTTAAT   GAA-AAAAGGATTTCCG CTGG CGGAAATCCTTTTGTTC    TGTATAATCCGAAAA 100 27
HC662_RS20140 3980915 .. 3980943 +  -2.5  -3.39668   TCACTACAATCATAA       GAGCCTGGCT ATATTGAGGC AG-CAGGCTC        TTATCACATTTGACA  47 491
HC662_RS20175 3988811 .. 3988840 + -10.1  -3.37654   CAGCCAGCAGCAAAA       TGACCTGC-CCC TTTAACC GGGAGCAGGTCA       TTCATCATTTATTCG  78 10
HC662_RS20190 NONE
HC662_RS20195 3992561 .. 3992585 +   -10  -4.80167   AGTCAAACGAAGAAA          CCCCAACCTT GAGTG AAGGCTGGGG          TTTTGCTTTTTAATA  91 10
HC662_RS20280 4009371 .. 4009391 +  -4.1  -5.03145   CGCCTCTTTTGGATA            TTGTTGTTA TAA TAAAAACAA            TTTTTTAAAAGATTG  73 155
HC662_RS20355 4021578 .. 4021606 + -13.3  -4.81249   GTTCCATACATGGTA        TAAGCAGAATCGT AAA ACGATTCTGCTTC        TTTTTCACTTTAAAA 100 23
        hutP 4026557 .. 4026595 +   -17  -4.96848   GATCATAGACGATAG  GGGGCTATGC-GTGAAA TCAAAT TTTCACAGCATAGCCCC   TTTTTGTATGGGCGC 100 52
        hutH NONE
        hutU NONE
        hutI NONE
HC662_RS20400 NONE
HC662_RS20405 4033561 .. 4033597 +  -9.5  -5.25699   CATATCCTTTAATTA    AAACAGCACACCCCA CTCAGGA TGGGATGTGCTGTTA    TTTTTATTCTGTAAT 100 29
       cotNE NONE
HC662_RS20525 4056238 .. 4056261 + -12.5  -3.55105   CAGTAACATAAAAAA          GCGGCATAG CTCCTC CTATGCCGC           TTACTTCTCTATTGT  95 35
HC662_RS20560 4062740 .. 4062761 + -10.9  -5.08601   AATGGCATGATAAAA           GCACTCACG ATGT TGTGAGTGC            TTTTTCTTCAGCTAA  93 39
        iolR 4075263 .. 4075275 +  -2.7  -2.87028   CGTTTACAATAGTGT                TGAGA GTC TTTCA                TCCATTTTATTCTAG  42 41
HC662_RS20620 4076245 .. 4076268 +  -6.8  -5.27335   ATAAGAAGAATAAAA          CAGTCTTCTCC ATT GGA-AAGGCTG          TTTTTATTTGGGCAA  88 37
HC662_RS20625 NONE
HC662_RS20630 4077513 .. 4077533 +  -9.8  -5.70829   AATAAAAAAACAAAA            CCTTACTC CGCGC GAGTAAGG            TTTTTTTATGATGTT 100 36
HC662_RS20635 4078283 .. 4078299 +    -8   -5.7946   ATAATGAGTAAAAAT              CCGTTC CCTGC GAACGG              TTTTTTTATTGAAAC 100 30
HC662_RS20640 4078877 .. 4078895 +  -3.1  -4.15565   TTTGCGCAAAAATCG             CCAATAC CCCGC GTTTTGG             TTTTAAAGTAATGCC  57 1
HC662_RS20645 4080412 .. 4080438 + -13.1   -5.0916   ACATTATAAAAAAAA         GGAATCGTCTC CTCAC GGGACGATTCC         TTTTTCTATTACACC 100 32
HC662_RS20660 4083686 .. 4083704 + -13.2  -4.78848   GAAGAAACGAAATAA             GAGAGGGA ATG TCCCTCTC             TTTTGTCTTTCAAAG 100 26
HC662_RS20670 4086349 .. 4086372 +  -7.5  -5.73339   TAATCATCGTTAAGA          GAATCTGCA TCATCT TGCAGGTTC           TTTTTTTATCATTCT 100 38
HC662_RS20675 4087019 .. 4087047 + -14.6  -3.90464   GATTGATACCAAAAA        CAGGCTGCCGAG ATCAC CTCGCCAGCCTG        TTCTGTTATTTCCCA 100 35
HC662_RS20690 4089531 .. 4089555 +  -9.4  -5.34857   TAAATAATAGAAAAA         GTCTAGA-GCC AATA GGCATCTAGAC          TTTTGTTTTCTTTAC 100 34
HC662_RS20720 NONE
HC662_RS20725 4095521 .. 4095559 + -19.2  -3.04144   CTGTTTCATATTTAA   TAAAGAAAGACTGCCC CGGAGGA GGGCAGTCTTTCTTTA   TCTTCACGATGCAAA 100 26
        gntR NONE
        gntK 4100316 .. 4100329 +  -6.7  -2.54687   TGACATGAAGGGGAG               GGCAT TACC ATGCC                GTTAATCATCGTTGC  56 45
        gntP NONE
         gnd 4103115 .. 4103139 +  -9.4  -5.60864   AACAGTCATAAAAAA         CACGG-TCAGT TTCA ACTGAACCGTG          TTTTTTTCATCTATG 100 39
        ahpC 4104153 .. 4104164 +  -2.2  -2.57136   GTAGGTAAAATCTAA                GGAG TGCA TTCC                 ATTGGTACTTGATGC  40 26
        ahpF 4105701 .. 4105741 + -22.1   -5.4505   CCGTAACTAATACAA  GAAAGCCGCAATATTGCCA GAT TGGCAGCATTGCGGCTTTC  TTTTTTATTCCAAAA 100 31
HC662_RS20780 4108404 .. 4108416 +  -2.7  -2.77256   GCTGCTGCATCTTGC                TTCTG ATA TAGAA                CTCTTCTTTCATTAA  42 20
HC662_RS20785 4108637 .. 4108658 +  -8.1  -5.56264   ACCAGCTGTGAGAAA           CCAGATTTT GATT GAAATCTGG            TTTTTTGTGTTTCAC 100 51
HC662_RS20790 4111098 .. 4111119 + -13.1  -3.30124   TTTCAAATAATTAAG           TAGACACGC TAAT GCGTGTCTA            TTATAAACCCTAAGA 100 336
HC662_RS20820 4117593 .. 4117616 + -13.2   -5.5454   ATTACCAGCAATAAA          GCCGG-CGTTC CGA GAACGTCCGGC          TTTTTCTTTATTTCA 100 27
        rapG NONE
HC662_RS20860 4123399 .. 4123415 + -15.1   -5.4505   GGATAATAAAGAAAA              CCCCCGC GGC GCGGGGG              TTTTTTGTTACAGCA 100 35
        rocR 4132654 .. 4132669 +  -2.6  -5.40072   GTCCGCTATCATCAG              C-ATGAC GCC GTCATCG              TTTTTTTGCAACGAA  79 256
HC662_RS20920 4135785 .. 4135809 + -10.7   -4.4521   AAATACTCTTTTAAA          CTGAACGTGTG TGA CCCGCGTTCAG          TTCTTTTTACATCAT  89 138
HC662_RS20925 4136419 .. 4136443 + -12.9  -5.47218   TATATCCTTTTTCAA          CTGAACGAGCG TGA CCCTCGTTCAG          TTTTTTTGCATGAAA 100 99
HC662_RS20995 4148137 .. 4148154 +  -6.9  -5.02476   TTTAATGAATGAAAC             CCTTCGC TGCA GCGGGGG              TTTTTTAGCGGATAT  85 36
HC662_RS21005 NONE
HC662_RS21010 4149926 .. 4149944 +  -2.3  -5.64421   AATTCAGCATAAAAA             GCGGGGG AGATC TCTTCGC             TTTTTTCTTTGAAAT  79 29
HC662_RS21015 4152139 .. 4152172 + -15.5  -3.10732   TATCTCGTGGTATAA     AAAAAGAGGCTTGGA ACAA TCCAAGCCTCTTTTC      TATTAAGCTTCCTCT 100 26
        cotF 4156574 .. 4156598 + -14.4  -3.58864   GATGAAATAAAACAA          GCAGCAAAGG AATTC CCTTTGCTGC          TATTTCTGCTGATCC 100 31
HC662_RS21050 4158118 .. 4158136 + -10.3  -5.29445   CTGATTAATAAAAAA             GCATCCC ATGTA GGGATGC             TTTTTCTTATTCACC 100 33
HC662_RS21060 4160337 .. 4160357 +  -9.8  -4.87665   TTAAGCTGGAATAAA            GAGTGCTT GCTGA AAGCACTC            TTTTTCTGCATCGAA  93 27
HC662_RS21075 4162628 .. 4162644 +  -5.1  -5.26316   ATTGGAAATAAAAAA              GGACC CAACTGC GGTCC              TTTTTTATGCCATCA  79 30
HC662_RS21085 NONE
HC662_RS21090 4165412 .. 4165431 +  -3.6  -3.43785   TTGTTCACAAATTTG            TCACTTAT GAGC ATGAGTGG             TTCATTGGTATACTA  51 42
HC662_RS21095 4166057 .. 4166072 +  -4.6  -5.95286   CCGCAAAAGCCTCTG              CGGCAG GCAT CTGCCA               TTTTTTCTTTTTGAT  93 125
HC662_RS21110 NONE
HC662_RS21115 4168462 .. 4168483 +  -8.1  -3.90744   TTATAAAAAAGAAAA           GAAGAGGTT AAAC AATCTCTTC            TTCTTTGAAAACGCG  77 64
HC662_RS21135 4170706 .. 4170724 +    -9  -3.21036   TTGTTTCCTAAAAAA             TAATCAGT TAA ACTGATTA             TATGTTATACTGATG  70 116
HC662_RS21140 NONE
HC662_RS21145 NONE
HC662_RS21150 4172018 .. 4172051 + -12.7  -2.54314   AAAAAATGGTCGATG     CTTAAGGAGATTAGA AAAT TCTAATCTCCTTAAA      ACTTTCTTATATATC  89 21
HC662_RS21160 NONE
HC662_RS21165 4173739 .. 4173749 +  -2.6  -3.13788   AGAAATAGGGATTAT                 TTTT GAG AAAA                 TGTGTTAAGTTAAAT  44 41
HC662_RS21170 4175848 .. 4175879 + -12.4  -3.11504   CCATCCAAACGTTAA      TAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTA       CTTTGTGATTTCTTA  87 9
HC662_RS21180 4178349 .. 4178371 + -13.5  -2.92246   CAGATTTAAAAAAAG           TCAGTGCGG ATCTG CCGCACTGA           TCTCATTACAATTCC  95 32
        yyaC 4187551 .. 4187579 + -10.5  -5.47399   GCGAATATAAAAAAA        GAAACCATCTT CGCTGGA AAGATGGTTTC        TTTTTTTACGATTCA 100 31
HC662_RS21255 4189892 .. 4189924 + -13.6   -4.3467   TTTTACCACAAACAC      AAAAAGCTCTCCTG CTTAT CAGGAGAGCTTTTA      TTTTGGTATGCGGAT 100 46
        rpmH 4197259 .. 4197282 -  -8.9  -5.11033   CATAACGTGAAAAAA          GACCACTGA CATTAT TCAGTGGCC           TAAGCTGATAATACT  91 25
        rnpA 4196675 .. 4196686 -    -3  -2.75844   TCTTTTATTGCAAAG                CATA CTTG TATG                 TATTTTAGCATCTTT  42 118
        yidC NONE
HC662_RS21280 4195191 .. 4195218 - -12.8  -5.71712   TCTCATACAAAAAAA        CCGAAATCCGAT TTTT ACCGGACTTCGG         TTTTATGCTATCTTT 100 33
        mnmE NONE
        mnmG NONE
        rsmG NONE
         noc 4189897 .. 4189919 - -13.5  -5.24799   CCACAAACACAAAAA           GCTCTCCTG CTTAT CAGGAGAGC           TTTTATTTTGGTATG 100 28
         soj NONE
       spo0J 4187551 .. 4187579 - -11.2  -5.80817   GCGAATATAAAAAAA        GAAACCATCTTC GCTGG AAAGATGGTTTC        TTTTTTTACGATTCA 100 31
HC662_RS21235 NONE
HC662_RS21230 NONE
HC662_RS21225 4185167 .. 4185180 -  -2.3   -4.8048   CTTCTATATGAAAAA               GCATG AGTG CAGGC                CTTTTTACGAAGTAG  64 30
HC662_RS21220 4183087 .. 4183119 -  -4.9  -4.13945   AGGTTCACTGGAAAA      GACAAGCTGACAA AACTGCA TTTTCAGCCTGCC      AAGCCCTTTGATTAT  63 37
        ychF 4181844 .. 4181854 -  -2.6  -3.27476   ATGGGCAAGGAGCAA                 TAAT TCT ATTA                 CTCACAATTTTATAT  46 75
HC662_RS21210 NONE
         ssb 4180955 .. 4180969 -  -4.2  -2.69433   TAATCACATTAGAAT               GGAAGA TCG TCATCC               GAGATGTCAATCGGT  47 4
        rpsR 4180626 .. 4180651 - -14.1  -5.24129   TCCCCCTATAAAAAA         GAGCAAGAACC CAAA GGTCCTTGCTC          TTTACGTATCAGCTT 100 39
         xth 4179814 .. 4179838 -  -5.8  -5.36441   TTTTCATATAAAAAA          GCAGTAAG TGTAAATTC CTTACTGC          TATCTCATCATATAT  85 33
HC662_RS21190 4178836 .. 4178849 -  -3.9  -2.61602   TGAAGTTATAAGGTA               TGAAA TGCA TTTCA                GTTCAAGCTTTTTTC  45 28
HC662_RS21185 4178348 .. 4178372 -   -10  -5.51402   ACAGATTTAAAAAAA          GTCAGTGCGG ATCTG CCGCACTGAT          CTCATTACAATTCCT 100 69
HC662_RS21175 4175851 .. 4175876 -  -9.7  -3.70919   TCCAAACGTTAATAA         GCAGCAGGGAT TAAG ACCCTTGCTGC          TTACTTTGTGATTTC  81 10
HC662_RS21125 4168462 .. 4168483 -  -5.9  -5.49579   TTATAAAAAAGAAAA           GAAGAGGTT AAAC AATCTCTTC            TTCTTTGAAAACGCG  85 370
HC662_RS21105 4166732 .. 4166766 - -11.7   -3.1585   TGAGTGAACGGAACA     TTTTCAATACCACTC AAGCA GACTGGTATTGAAAA     GAAGCCGGTTCTCGC  83 71
HC662_RS21080 4162621 .. 4162651 - -11.4  -3.59979   CCTGCCCATTGGAAA       TAAAAAAGGACC CAACTGC GGTCCTTTTTTA       TGCCATCAATCCAAT  85 31
HC662_RS21065 4160337 .. 4160357 -  -9.8    -4.183   TTAAGCTGGAATAAA            GAGTGCTT GCTGA AAGCACTC            TTTTTCTGCATCGAA  85 48
HC662_RS21055 4158118 .. 4158136 - -10.3   -5.5112   CTGATTAATAAAAAA             GCATCCC ATGTA GGGATGC             TTTTTCTTATTCACC 100 32
        hypR 4156574 .. 4156598 - -15.1  -4.56436   GATGAAATAAAACAA          GCAGCAAAGGA ATT CCCTTTGCTGC          TATTTCTGCTGATCC 100 25
HC662_RS21035 4155764 .. 4155785 -  -8.1  -4.55798   CATTGCAAATGAAAA           GACATTCTT TAAA AAGAATGCC            CATCACGATTAATGT  86 34
HC662_RS21030 NONE
        gdpP NONE
        rplI 4152144 .. 4152167 - -15.4  -5.60993   CGTGGTATAAAAAAA          GAGGCTTGGA ACAA TCCAAGCCTC           TTTTCTATTAAGCTT 100 33
HC662_RS21000 4148040 .. 4148053 -  -3.8  -4.74103   GCCGCAATTGAAAAA               GCCA AACAGG TGGC                AAAGGAAAACAGCCC  71 146
        dnaB 4146369 .. 4146391 - -13.5   -4.8622   CTTTCGAATGAAAAA           CCCCCAAGA TCAGC TCTTGGGGG           TTATGCGCCGGGCGG 100 26
HC662_RS20985 NONE
        purA 4144321 .. 4144343 - -14.2  -5.63517   CTTTCAAACAAAAAA           CAAGCCCCTA TAT CAGGGGCTTG           CAAGCATATTCTATT 100 40
HC662_RS20975 NONE
HC662_RS20970 4143906 .. 4143942 - -10.3  -3.27022   CGGACCTTACAGTAA   TTGCCCG-GAGAGCTG TCGTGT CAGCTCTCACAGACAA    ATAAGGAATTTAGCA  79 58
HC662_RS20965 NONE
HC662_RS20960 4143681 .. 4143702 -  -8.7  -5.79595   TCCTAAAAGAAAAAA           CGCACCTAC GATT GCAGATGCG            TTTGGTAAGTGGCTC 100 33
        walR NONE
        walK NONE
        walH NONE
        walI NONE
HC662_RS20935 4137691 .. 4137724 -  -3.3  -2.54193   CACGATCGTAATCCA     CCATATT-CCATCCTT TCC AAGAACGTTAATATGG     TTATATTGTGGGTTA  43 77
        htrC 4136461 .. 4136486 - -17.7  -4.72272   TTTTTGCATGAAAAA         GCAGTCTGGCA ACGA TGCCAGACTGC          TTTTATTTACTTCCT 100 28
HC662_RS20915 NONE
HC662_RS20910 4132030 .. 4132052 -  -3.4  -5.47821   ATTTATCCAAAAAAA           CAACCATCTG TTC CAAATGAATG           TCGAACACATCAGCG  85 402
HC662_RS20900 NONE
HC662_RS20895 4129840 .. 4129864 - -12.3  -4.65895   TTTCCCAGTTAAAAA          GAGGTTAGAAT AAG ACTCTAACCTC          TTTAAATAGGAAACA 100 49
HC662_RS20890 NONE
HC662_RS20885 NONE
HC662_RS20880 4127508 .. 4127533 -  -9.9  -4.91109   CCTCCACTATAAAAA         GGCGTAATC-TA AAT TATGATTACGCC         TTTTGCCTATAGTTC  93 41
        rocD NONE
HC662_RS20870 NONE
        rocF 4123394 .. 4123420 - -15.2  -4.32177   TGATTGGATAATAAA         GAAAACCCCCGC GGC GCGGGGGTTTTT         TGTTACAGCAATTTC 100 28
HC662_RS20850 4121572 .. 4121586 -  -7.1  -5.38047   CATTTACAGAAAAAA               GGCCT TTATC AGGCC               CTTTTCGTTAAAGCT  91 33
HC662_RS20845 NONE
HC662_RS20840 4119519 .. 4119536 -  -4.8  -2.66692   GACGAGCAGTATAAC             GGCTCC CAAATC GGAACC              CCCTTCACCTTAAAA  49 35
HC662_RS20835 4119248 .. 4119264 -  -9.5  -6.09888   GCGTAACAAAAAAAA              GAGACTT CAC AAGTCTC              TTCATAAACAGCGAT 100 52
HC662_RS20830 NONE
        fdhA 4117593 .. 4117616 - -13.2  -4.27441   ATTACCAGCAATAAA          GCCGG-CGTTC CGA GAACGTCCGGC          TTTTTCTTTATTTCA 100 33
HC662_RS20815 NONE
        rlmH 4116029 .. 4116052 -  -8.8   -3.1682   AATAATTAATAGACA          TCCCACCCTC TTAC AAGGGAGGGA           TTTGTTTTGATTTTC  70 236
HC662_RS20805 NONE
HC662_RS20800 NONE
HC662_RS20795 4111098 .. 4111119 - -13.1  -2.76509   TTTCAAATAATTAAG           TAGACACGC TAAT GCGTGTCTA            TTATAAACCCTAAGA  93 35
HC662_RS20770 4105701 .. 4105741 - -22.1  -3.76048   CCGTAACTAATACAA  GAAAGCCGCAATATTGCCA GAT TGGCAGCATTGCGGCTTTC  TTTTTTATTCCAAAA 100 91
HC662_RS20735 NONE
HC662_RS20730 4095521 .. 4095559 - -19.9  -3.12351   CTGTTTCATATTTAA   TAAAGAAAGACTGCCCC GGAGG AGGGCAGTCTTTCTTTA   TCTTCACGATGCAAA 100 29
HC662_RS20715 4093769 .. 4093786 -  -7.7  -5.27923   GAATGGCATAAAAAA             CCCATGC GAAC ACATGGG              TTTTTTGGCTATTAA 100 37
        yxaF 4091959 .. 4091977 -    -6  -3.97834   TAATTGTAGGAGAAA             GGATAACA AAA TGCTACCC             TTTTTTTCTCACCAG  66 20
HC662_RS20700 NONE
HC662_RS20695 4089531 .. 4089555 -  -9.4  -5.23765   TAAATAATAGAAAAA         GTCTAGA-GCC AATA GGCATCTAGAC          TTTTGTTTTCTTTAC 100 20
HC662_RS20685 4088394 .. 4088407 -  -2.3  -3.20109   TAGAAAACTATGTAA               GGCTG TTCG CAGAC                GTTTTTTCAGCAACT  43 4
HC662_RS20680 4087019 .. 4087047 - -15.3  -4.81551   GATTGATACCAAAAA        CAGGCTGCCGAGA TCA CCTCGCCAGCCTG        TTCTGTTATTTCCCA 100 31
HC662_RS20665 4083686 .. 4083704 - -13.2  -4.21086   GAAGAAACGAAATAA             GAGAGGGA ATG TCCCTCTC             TTTTGTCTTTCAAAG 100 35
HC662_RS20655 4082486 .. 4082504 -    -6  -5.42259   TTATTCTCAAAAAAA             GAGAGG TCATCAC CCTCTC             TTTTTTTCTGCGTCA  85 16
        htpG 4080412 .. 4080438 - -11.7  -6.00086   ACATTATAAAAAAAA        GGAATCGTCTCC TCAC GG-GACGATTCC         TTTTTCTATTACACC 100 34
HC662_RS20610 4072568 .. 4072598 - -11.9  -2.83271   CTATTGGTAGAATGA      GTCCGAACAGCGCC CATA GACGCCGTTCGG-C       TGTTCGTCGTTTAGT  86 36
        iolB NONE
        iolC NONE
        iolD 4068778 .. 4068788 -  -6.8  -3.01712   GCCTCCCCTCTAATA                 CTGC TTC GCAG                 ATTCCAGCATTTTTT  58 9
        iolE NONE
        iolF NONE
        iolG NONE
HC662_RS20575 4064533 .. 4064575 - -15.8  -2.58999   GTTTTAGATATGAAG GGAGTTCGGCAGGA-A-GGC TGTTC GCCATATCCCGCCGAACTCC ATGCTCAGCTTATGC 100 35
        iolI NONE
         fba 4062740 .. 4062761 - -10.2  -4.47328   AATGGCATGATAAAA           GCACTCAC GATGTT GTGAGTGC            TTTTTCTTCAGCTAA  89 33
HC662_RS20555 4061161 .. 4061182 - -12.3  -4.34263   GCGCAACAAGAGAAA           GCGGGCCTT CATA AAAGCCCGC            TTCTTACCGTTCTTT  95 29
HC662_RS20550 NONE
HC662_RS20545 4059328 .. 4059366 -  -2.5  -5.63504   AAGCTCATAAAAAAA  CCCTCCCGATAAG-CTGG TAAA CAAATCTTATCAAGAAGG   ATGACAGTGTGCTAT  80 61
HC662_RS20540 NONE
HC662_RS20535 NONE
HC662_RS20530 4056238 .. 4056261 - -12.5  -5.49569   CAGTAACATAAAAAA          GCGGCATAG CTCCTC CTATGCCGC           TTACTTCTCTATTGT 100 34
HC662_RS20515 4054380 .. 4054404 -  -5.6  -3.12351   GCCGGTGATATTCAA          GATGGCAAGC TTCAC GCCTGCCGCC          ATCAAAAAGTATACC  54 356
        yidA 4053312 .. 4053333 - -10.2  -5.60689   CGAGATAACAAAAAA           TCCAGCCT TCTAAG AGGCTGGA            TTTCATTATTTCGCC 100 31
HC662_RS20500 4052002 .. 4052035 -    -6  -5.94713   ATTGCACAAAAAAAA     TAAGCTGACCCCGA ATCATA CCGGAATCAGCTGA      TTGAATCTTAATTAA 100 33
HC662_RS20495 NONE
HC662_RS20490 NONE
HC662_RS20485 4048807 .. 4048822 -  -3.2  -4.24342   CGGTTTATCAATAAA              CATCAC TTTT GGGATG               AGGATATCTTTTGGC  60 183
HC662_RS20475 4047119 .. 4047152 -    -6  -5.94713   ATTGCACAAAAAAAA     TAAGCTGACCCCGA ATCATA CCGGAATCAGCTGA      TTGAATCTTAATTAA 100 33
HC662_RS20470 NONE
HC662_RS20465 NONE
HC662_RS20460 NONE
HC662_RS20455 NONE
HC662_RS20450 NONE
        sndB NONE
HC662_RS20440 NONE
        eutH 4038954 .. 4038985 -  -5.3  -2.64679   ACGAAGTTGAAACAG     CTTATGTCTCAGCCA TGTC CGGCTGAGACAT--G      TTTTTGCTGATCAGC  51 2
HC662_RS20430 4037984 .. 4037997 -  -3.7  -2.78384   TTTGCTTTTATTATA               CAGGC TGGC GCCGG                CTTCCATCCACCTGA  45 91
        deoR 4036997 .. 4037008 -  -4.4  -3.35467   GTCACAAATCATTAA                CAAG CGCC CTTG                 CGGTATGCTGGTCAA  52 0
        deoC 4036177 .. 4036197 - -11.9  -3.60939   AAGAAAGATAAGCAA            CGGAAAGCA ATG TGCCTTCCG            TCAGCTTTTTAGTAG  90 34
        nupC NONE
HC662_RS20410 4033564 .. 4033594 - -14.1  -4.41047   ATCCTTTAATTAAAA       CAGCACACCCCAC TCAGG ATGGGATGTGCTG       TTATTTTTATTCTGT 100 32
        abnB 4023945 .. 4023960 -    -9  -4.81644   CAAACAAAATCAAAA              GGCCTT TCAA AAGGCC               TTTTATTAATAATTT  88 45
HC662_RS20365 NONE
HC662_RS20360 4021581 .. 4021603 -   -15  -3.35934   CCATACATGGTATAA           GCAGAATCGT AAA ACGATTCTGC           TTCTTTTTCACTTTA 100 138
HC662_RS20350 4019691 .. 4019706 -  -5.4  -4.34402   TTCTCGAGAGTAAAA              TCCTGC TTAC ACAGGA               CTATAAGATCAGGTA  68 211
HC662_RS20345 NONE
HC662_RS20340 NONE
HC662_RS20335 NONE
HC662_RS20330 4016713 .. 4016728 -  -4.8  -3.54382   CGTTAACACAAGCAA              GAAAAT GCGT ATTTTC               CAATCCTAATTAATT  56 35
HC662_RS20320 4015929 .. 4015955 -  -6.5  -4.39166   TTTTATACATTAAAA         CCTTGAAAGGC GTTTT GCCAATCAAGG         TTTTATCATATGCTA  75 38
HC662_RS20315 4015487 .. 4015503 -  -2.3  -3.43773   TTTTATATTTAAACA              GAATCTC TTA AAAATTC              TACGCTTATCCTGTC  46 2
HC662_RS20310 4014708 .. 4014720 -  -6.3  -3.30441   GATTATTTTCTATAA                GAGAT TCT ATCTC                ATGAGCTGAAAATTG  58 512
HC662_RS20300 4013438 .. 4013488 - -12.1  -6.41881   GAGAATAAAAAAAAA CCTAAATGACACAGATTGCGAGAG TCTC CTCCTGC-ACCTGTACCATTTAGG TTTTGCCTGCTTTCG 100 167
        bglP NONE
        bglH NONE
HC662_RS20285 4009418 .. 4009432 -  -5.8  -3.33815   ATTGTGTTTAATGAA               CAATTT ACG AAATTG               TGGAAAAGCAAACTC  58 112
HC662_RS20270 4006318 .. 4006330 -  -6.2  -5.93252   CCCAAAAACAAAAAA                GGCC GCTTA GGCC                TTTTTACATTTTTCT 100 45
HC662_RS20260 3998348 .. 3998382 - -11.6  -2.58418   TCCGTATATAAAAGG     GGGCTTGATGATAA TCATAAT TTCTCATCAAGCCC     AAAATATATTACACT  81 197
HC662_RS20255 3997470 .. 3997487 -  -7.1  -3.17571   AACCCCTGAAGGCAA             GTGAAAA GCAC TTTTCAC              CCTTCCCTCTTCTGA  62 421
HC662_RS20245 NONE
HC662_RS20240 NONE
HC662_RS20235 NONE
HC662_RS20230 NONE
HC662_RS20225 3994763 .. 3994773 -  -2.4  -3.35046   TCAGCTTTTCAAACA                 TGCG GTC CGCT                 CCCTCCCGTCACCTC  45 8
HC662_RS20220 3994138 .. 3994151 -  -5.3   -4.9218   CAGTGATCAGAAAAA               CATCA TCAT TGATG                GAAGCTAACAGAAAG  76 341
HC662_RS20210 3993220 .. 3993250 - -15.6  -4.86731   TGTTTGGAAATAAAA       CAAAAGCAGCTGCC TTC GACAGCTGCTTTTA       TCATTCGATATTCTT 100 406
HC662_RS20200 3992561 .. 3992585 - -12.2  -4.40298   AGTCAAACGAAGAAA          CCCCAACCTT GAGTG AAGGCTGGGG          TTTTGCTTTTTAATA 100 35
HC662_RS20185 NONE
        dbpA 3988811 .. 3988840 - -11.5   -4.3129   CAGCCAGCAGCAAAA       TGACCTGCCCC TTTAACCG GGAGCAGGTCA        TTCATCATTTATTCG  93 30
HC662_RS20170 NONE
        licT 3985581 .. 3985633 -  -6.5  -5.86609   TGAAAAAAATAAAAA CCTAAATTACCATCAGCACAGAC CGAGATC ATCCGCACTCATTGTAATTTAGG TTTTGCCTGCTTATC 100 118
HC662_RS20160 NONE
HC662_RS20155 3981934 .. 3981944 -  -5.4  -3.40907   CGATATGAACAGGAA                 GGAA TTC TTCC                 GAAAATTAAACGGAT  57 215
        bglS 3980450 .. 3980472 - -13.6  -4.38472   GGCAAATTAAAATAA           GGCTATTTCA TTG TGAAATAGCC           CAAGTGAATTCTTAT 100 512
HC662_RS20130 3976201 .. 3976219 -  -6.1  -4.25104   TGCTCCTTATGAAAA             GTATCTT CCTTT AAGATAC             AGGAGCAGATCAAAT  70 35
HC662_RS20125 3975867 .. 3975883 -  -7.3   -5.7946   TTTCCAATAAAAAAA              GAGACAC AAT ATGTCTC              TTTTTTTATTGTTTA 100 31
HC662_RS20120 3975035 .. 3975065 -  -9.8  -2.70946   GTGTGGTAGAAACAT       TGAGCCATATCC CTTTTGC GGATATGGCTCT       TTTGATTATTGATAA  74 31
HC662_RS20110 3972523 .. 3972552 -  -4.4  -4.29153   TCATGATAAAAAACA       CCTCATTCATTT TTAGAT AAATGAAAAAGG        CATAGACAAATAAAC  64 176
HC662_RS20105 3971616 .. 3971642 - -12.4  -5.14965   ATTCCGATTAAAAAA         GGAAAGCTCC TTTTTTC GGAGCTTTCC         TCTGCCATTCATTTC 100 34
HC662_RS20100 NONE
HC662_RS20095 NONE
HC662_RS20090 NONE
HC662_RS20085 3967859 .. 3967888 -    -5  -5.23016   AAATAAGCCAAAAAA       CACACTTGATTC TCTAAC GGAGCAAGTGTG        TTTTTTTATGTCATT  79 36
        galE 3960371 .. 3960392 - -14.5  -4.21314   AATAATAGCTGAAAA           GGCCTTCTC TGTT GAGAAGGCC            TCTATTCTTATTCCG 100 33
HC662_RS20035 3958392 .. 3958416 - -11.5  -4.39696   TTCTAAACGAACAAA          TCCCTCTGC TTCAAGT GCAGAGGGA          TTTTCATTATTTAGA 100 32
HC662_RS20025 NONE
        msmX 3954597 .. 3954618 - -14.5  -5.84432   GAGAACACAAAAAAA           CCGGACATG TCTC CATGTCCGG            TTTTTGAACTTATCG 100 35
HC662_RS20015 3953766 .. 3953787 - -10.1  -5.63103   TTTCAAGCAAAAAAA           CCGGACATG GAAG CATGACCGG            CTCACATTTAAGAAA 100 33
HC662_RS20010 3952726 .. 3952741 -    -6  -5.07652   CCTTGGAAAACAAAA              GCCGCC AGCA GGCGGA               CAGCGGTTTTTTCGG  80 138
        cydA NONE
        cydB NONE
        cydD NONE
        cydC 3942813 .. 3942833 -  -6.8  -5.95539   TTTCAAACAAAAAAA            TGACAGCC TCAGG GGCTGTCT            TCCAGATTGTTGACA 100 228
HC662_RS19970 3941889 .. 3941911 - -12.1  -4.71426   GGGTTATCAAGAAAA           GCTGTCTTC TCTAT GAAGACAGC           TTTTTATTATTCAAA 100 32
        sigY NONE
HC662_RS19955 NONE
HC662_RS19950 NONE
HC662_RS19945 3939068 .. 3939078 -  -3.2  -3.13309   CATAATGACTCAATA                 GACA GCA TGCC                 CGCTCACCTTTGCTT  46 29
HC662_RS19940 NONE
HC662_RS19935 3937315 .. 3937338 -  -4.6  -4.56597   TTCTTGCCGGAAAAA          CCGCACAGC TTTTCGG GCT-TGCGG          AGGTTTTTTATGGAG  69 102
HC662_RS19920 NONE
HC662_RS19915 3933556 .. 3933575 - -10.7  -5.64274   TGACCCATAAAAAAA            CAGCCGG ATTCAG CCGGCTG             TTCGGGAAGCGGACA 100 15
        licR 3931409 .. 3931428 -  -6.6  -2.84634   GTTGATATCATCATA            TTATGAAA TCGC TTTCATAA             ACACTCAAGGTTTTT  57 80
HC662_RS19905 NONE
        celB NONE
HC662_RS19895 NONE
HC662_RS19890 3927967 .. 3927986 - -12.1  -5.72254   GTAAATAAGAAAAAA            GCCGGCC ACTGAG GGCCGGC             TTTTTTACGCTTCAA 100 30
HC662_RS19850 NONE
HC662_RS19845 3920178 .. 3920198 - -12.5  -5.83226   AATGTAACAAAAAAA            GACCGCACG AAA CGGGCGGTC            TTTCGGTTTTATCGG 100 34
        ywaC 3919389 .. 3919410 - -10.9  -5.40004   TAGCAAAGCAAAAAA           GCGAAACCT TGTC AGGCTTCGC            TTTTGTAAAATATAA 100 47
HC662_RS19835 NONE
HC662_RS19830 NONE
HC662_RS19825 3916762 .. 3916780 -   -11  -4.61162   ATATTAAATAAGAAA             GACGGCAC TTG ATGCCGTC             TTTTTAAGGTAATGA  90 46
HC662_RS19805 3912355 .. 3912375 -  -3.3    -3.494   GAATGTGCTATACAA            CAAAAAAGG TGT CACTTTTTG            AACATGCGATATAGC  49 16
HC662_RS19800 3911357 .. 3911379 - -10.7  -5.96894   AGGCAAACAAAAAAA           CGCTTTTGA GCTGA TCAAAAGCG           TTTTTTATATCCGAT 100 41
        celB 3905078 .. 3905092 - -11.4  -5.45652   AGCGTTAAGAAAAAA               GCAGCG TAA CGCTGC               TTTTTTTATTATTTA 100 54
HC662_RS19770 3903353 .. 3903373 -  -7.6  -5.71712   TTCTACATAAAAAAA           GCTGCTCCT GAAC AGG-GCAGC            TTTTTTCTTTATTTT 100 34
HC662_RS19745 NONE
        thiM NONE
HC662_RS19735 3898215 .. 3898236 - -14.5  -4.80882   ATGCCACAGCAAAAA           GGCTGTCCT TTAC AGGACAGCC            TTTTGAATGGAAAAC 100 46
        efeU NONE
        efeM NONE
        efeB 3894020 .. 3894036 -    -8  -5.00616   CTGTTTTTTAAAAAA              GAAGCC GATAA GGCTTC              TTTCAGATTGTTGAC  86 221
HC662_RS19715 3893324 .. 3893342 -  -8.9   -5.2112   AATAGGAGTAAAAAA             GCTCTCT TGTGT AGAGAGC             TTTTTCTTACTTTTT 100 32
        qoxB NONE
        qoxC NONE
        qoxD 3888677 .. 3888696 - -12.2  -5.23316   GAGGACAGCAAAAAA            CCCTCTTC GTTA GAAGAGGG             TTTTTGTATTATTCG 100 34
HC662_RS19680 3887010 .. 3887026 -  -6.5  -5.79588   TCAAAATGAAAAAAA              CCCCATT ATA AAAGGGG              TTAAAAGAAATCCAT 100 26
        rodA 3885610 .. 3885631 - -13.1  -5.64873   TGCAACAACAAAAAA           GACAGCCTT TTTC AAGGCTGTC            TGCATATTAAGAATT 100 32
HC662_RS19665 3883573 .. 3883594 - -17.3  -4.10566   ATTGAATAATAAGAA           GCCCTGCCG AGAT CGGCAGGGC            TTTTTCAGATTAATT 100 35
HC662_RS19655 NONE
        sacT 3879410 .. 3879433 -    -6  -6.28967   GATAAATAAAAAAAA          CTTCCAGAGA TCAC TCCCTGCAAG           TCAAAGCGGTTATTC 100 35
        scrA NONE
HC662_RS19635 3875500 .. 3875514 -  -2.9  -4.84311   TTTCACATAAGAAAA               TAGAA GGATT TTCTA               CATAAGGGTCCAAAT  65 23
HC662_RS19630 3875147 .. 3875165 - -13.2  -5.36441   TTTTCACAGAAAAAA             CTGCCGAT CCC ATCGGCAG             CCTGTTTATTTGATT 100 31
HC662_RS19620 NONE
HC662_RS19615 3872557 .. 3872573 - -12.3  -5.65927   TACTTAAATAAAAAA              GCGCAGA GTA TCTGCGC              TTTTTACAAATCCTT 100 29
HC662_RS19605 NONE
HC662_RS19600 NONE
HC662_RS19595 3868887 .. 3868914 - -12.2   -5.4659   CAAGATAAAGAAAAA        GCCAATCGCTCAT TTG ATGAG-GATTGGC        TTTTTTATTTATAGA 100 34
        spsA NONE
HC662_RS19580 NONE
HC662_RS19575 NONE
HC662_RS19570 3864292 .. 3864303 -    -3   -3.9461   GCGGGTGAAGAATAA                GATA ATCC TATC                 CTTCATAGATGCGGG  53 317
HC662_RS19560 NONE
        rfbB NONE
        rfbD NONE
HC662_RS19545 3861112 .. 3861134 -  -4.9  -4.02919   AAAGGACAAAAAAAG          TCGAAGATGC CTCC GC-TCTCCGA           TTGATCACGTTCCTA  61 44
        bslB 3860326 .. 3860348 -  -9.2  -5.87996   TAATCAACAAAAAAA           GAGACTGAAA ACA TCTCAGCCTC           TGATTAAACCTATTC 100 42
        rocG 3858893 .. 3858906 -  -8.1  -3.28924   TATTTTGCGCCAGAA               GGGGA TATC TCCCC                TTCCGAATTTATACC  70 34
        pruA 3857082 .. 3857109 - -12.1  -3.81062   ATCAAAAAGTTGAAA        TCGTGCGATCC GCTAAA GAATCGCACGA         TTTTATTTCTCTCAA  90 42
HC662_RS19525 3854894 .. 3854910 -  -5.9  -4.09685   TTTGATGCTTGAAAA              CCAAAAT TCC ATTTCGG              CAAAGCTTCTGACAG  68 467
HC662_RS19515 3852451 .. 3852464 -  -6.7  -6.04953   ATACAAACAAAAAAA               CCCTT AATA AAGGG                TTTTTTGTTATAGGA 100 56
        bacA NONE
        bacB NONE
        bacC NONE
        bacD NONE
        bacE NONE
        bacF 3846441 .. 3846458 - -11.3  -5.75478   AAGCATATAAAAAAA             TCCCGCT TTTT AGCGGGA              TACTTCTTGTAATGA 100 17
         pta 3843477 .. 3843501 - -13.6  -5.03314   CGGAGGCGCAAAAAA          GGCAGCCCTC AGGAA GAGAGCTGCC          ATCGTCTTCATTTTT 100 42
        cysL NONE
        ywfL 3841541 .. 3841570 - -23.7  -5.79595   GCTTAAAATAAAAAA       CGCATGCCAGCCG GATA CGGCTGGCATGCG        AAGAACGTTCACCCA 100 34
HC662_RS19455 3840384 .. 3840409 -  -9.9  -4.94222   AATAACTTAGAAAAA         TCCCAAAACGAG CTG CT-GTTTTGGGA         TTTTCACCATGTGCA  93 132
HC662_RS19445 3839119 .. 3839139 -  -5.4  -5.27477   ATGTGAAGCAAAAAA           GCCT-GACC TGGG GGCCGAGGC            TATGAAAAATATGTT  81 42
HC662_RS19440 NONE
HC662_RS19435 3837122 .. 3837148 - -13.2   -5.7946   TTGTCAACAAAAAAA         GCAAAAGAAACG GAT CATTTCTTTTGC         TTGGTATGGTTAACA 100 35
HC662_RS19430 NONE
HC662_RS19425 3834879 .. 3834909 - -11.2  -5.71712   GTTCATATAAAAAAA       CACACCCATCCCTC TAA AAGGGACGAATGTG       TTTATTATCCGTGGT 100 286
        thrS NONE
HC662_RS19410 3831842 .. 3831862 - -11.8  -3.90729   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTTCCATCCCTAT  90 37
HC662_RS19400 NONE
HC662_RS19395 3830221 .. 3830259 - -10.4  -5.06451   TATCACCCTAAAAAA   TGAAAAACCCCGAGTC TTGTTTC GGCTCGGGATTTTCCA   TGTCCTAGTTTCTGT  93 110
         bla 3828128 .. 3828156 - -14.1  -5.12617   TAAGCATGCAAAAAA        CCGATTCTCTTTA CAC TAAAAAGAATCGG        TTTCTAGTTTTATCC 100 84
HC662_RS19375 NONE
HC662_RS19370 3824758 .. 3824769 -    -3  -4.84359   GTACTGTTAGAAAAA                TGTA GATT TACA                 ACGGTAAGCTCATCA  65 499
HC662_RS19365 3821476 .. 3821491 -    -9  -6.14618   GAGAAAAGAAAAAAA              GATGCC ATTA GGCATC               CAACTAAGGCAAATG 100 478
        speE 3816446 .. 3816466 -    -9  -5.00616   CTTTCCTGTAAAAAA            GCGCAAGA TTCGC TCCTGCGC            CATACCATCATTATT  91 36
        speB 3815509 .. 3815531 - -16.4  -4.98616   TTAAAAGATGAAAAA           GGGCCTGAAT TAC ATTCAGGCCC           TTTTATTAAAAACTA 100 38
HC662_RS19290 3808309 .. 3808321 -  -4.1  -4.56775   ACGTCCTTTTAAAAA                TGCAC AAC ATGCA                TTTGGTTAAATTGCA  66 31
HC662_RS19285 3806527 .. 3806543 -  -6.5  -3.62096   GCCGACGATGTCAAA              TCGCTGC GTG GCAGCTA              TAAAAATGTCCGCCA  61 405
HC662_RS19235 NONE
HC662_RS19230 3797534 .. 3797557 - -16.8  -5.24129   TTTCCTCATAAAAAA          GGGCAAAGCC CGCA GGCTTTGCCC           TTTCTCATCATTACA 100 36
        narK NONE
         fnr 3795403 .. 3795426 - -16.8   -5.5208   TCACAAGATAAAAAA          CCAAGGACCG GCGG CGGTCCTTGG           TTTCTTCAGTCAATA 100 31
HC662_RS19210 3794048 .. 3794070 - -16.4  -5.32699   TCAAAGATCAAAAAA           CCCGGTTCTT TTT AAGAACCGGG           TTCGGCGTTTTCATC 100 14
HC662_RS19205 NONE
        narH 3788713 .. 3788723 -  -2.4  -3.67393   AAATTAGAAACAAGA                 GCCG GGA CCGC                 CTGAAAATGATAAGC  48 3
        narJ NONE
        narI 3787430 .. 3787448 - -14.6  -5.32882   GATTATCATAAAAAA             TCCCCCTC ATT GAGGGGGA             TTTTTACGAGCGTTT 100 29
HC662_RS19185 3786645 .. 3786669 - -11.4  -5.60993   CTTTGCAGAAAAAAA          GCCTCCCCGC ACGAG GCGGAAAGGC          TTATGATGAGGCTTC 100 26
         cls 3785000 .. 3785022 -  -2.8  -3.97368   CCCCCAATGTATAAA           TAACTGATAA CAT TTCTCAATTA           TACTATACACCGGCT  53 68
HC662_RS19175 NONE
HC662_RS19170 3782688 .. 3782708 - -12.7  -5.04597   ACTTACATATAAAAA            GGATAGACA TCT TGTCTATCC            TTTTTCTTATGGCCT 100 32
HC662_RS19150 NONE
        acdA 3776611 .. 3776623 -  -3.4   -3.0516   TATCAATAATGAAAG                CGAT TTTGT ATCG                TTCTTATACAAACCA  45 140
HC662_RS19140 3775906 .. 3775933 - -17.2  -4.67697   GGTGAAAATAAGAAA        GCTCCCTTTCAA TTTC TTGAAAGGGAGC         ATAACGTACTATGTT 100 126
        pyrG 3774147 .. 3774176 -    -8  -5.85425   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAACGG-CAAGTC       TTTTTTTATTACTTC 100 34
       spo0F NONE
HC662_RS19120 3771961 .. 3771983 - -13.4  -4.27861   AAGATAGACGGAAAA           CCGCCTGTCA AGC TGTCAGGCGG           CTATAAACGTTCCAA 100 46
         fsa 3771201 .. 3771244 -  -7.7  -4.60487   CAGGACGGTGAAAAA CAAAGGCCGCGACAAACAG GCATAAAG CTGTTTGCCGC--CCTTTG CATTATTTATTCCAG  83 28
HC662_RS19110 NONE
        glpX 3768556 .. 3768571 -  -8.2  -5.07652   TTCTGCAAAAGAAAA              GCGGGC TCAC ACCCGC               TTTTTCTTTTTTTAT  91 37
HC662_RS19100 3768168 .. 3768184 -  -2.3  -3.22943   AAGAGGAAATAGATA              CGTCTTT CAT AAAAACA              CCACGCTTTTCATAG  45 41
         rho 3766893 .. 3766915 -    -2  -3.81488   CTTTTGCAAATACAA           TTTATCTTCT AGC AGATGATAGA           TTTGCCTGTTTCCAT  50 4
        rpmE 3766537 .. 3766559 -  -9.9  -5.53436   AGACAATATAAAAAA           CAGGCAAGA CTGCT TCCTGCCTG           TTGAAAAATCTATTA 100 41
HC662_RS19085 3765851 .. 3765871 -  -7.6  -6.12328   AGAATATAAAAAAAA           CACCG-GTG TTTT CACACGGTG            CTTTCTATCTTTTTA 100 54
        malS NONE
HC662_RS19075 3762846 .. 3762863 -  -8.4  -5.38497   ACCTAAAGTAAAAAA             GCTCCC TTTACG GGGAGC              TTTTTTGATTACGCA 100 34
        prfA NONE
        prmC 3759694 .. 3759705 -  -2.2  -3.18383   AGCTTGATTTATCAA                CTCG CCAG CAAG                 CTGCTTATTTATTTT  43 30
HC662_RS19050 3759335 .. 3759353 - -13.2  -5.44119   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTCATTAAAACA 100 33
      spoIIR 3758147 .. 3758158 -    -3  -3.69094   AATCTATGAGGCAAA                TCTA TTTT TAGA                 CCAGGTGATTAGGAA  49 34
HC662_RS19035 3757590 .. 3757622 - -12.1  -4.63218   TGTCCTGTAATAAAA      CAAGCGTTATCCACA AAT TGTGGACAACGCTAA      TGAAGAAGTGGATAA 100 54
HC662_RS19030 3756389 .. 3756443 -  -6.6  -4.17296   TCCGACATACATAAA TAACCCCCTT-GGACACGC-CCCGCT TTTTT AGCCTATGCGTGTCCAAAAAGGGTTA GAACATATGACTGTG  71 42
HC662_RS19025 3755792 .. 3755810 -  -4.6   -5.5353   TATATGAAGAAAAAA             GAAACG GCGACTT CGTTTC             TTTTATTGGTATATT  84 39
HC662_RS19020 3755272 .. 3755283 -  -2.2  -2.91873   AGGATTTGCAAATGA                CCTG TTTG CAGA                 TTTTCTGACAACTTA  42 38
        rpiB NONE
HC662_RS19005 3754110 .. 3754135 -  -4.1  -5.26119   GCCTTAAAAATAAAA         GAAAAGACT TTCCACGC AGTCCTTTC          ATTCGCACCCATAAA  76 24
        glyA 3752645 .. 3752667 - -12.7  -5.04987   AACATCGTCAAAAAA          CCCGC-CGGC CAAA GCCGAGCGGG           TTTTTAGGATCTTAG 100 37
         upp 3751890 .. 3751912 -  -8.5  -5.63504   AACTGGATAAAAAAA           GAAAACCCC TTTCG GGAGTTTTC           CTTTTATTTTGTTCC 100 29
HC662_RS18990 NONE
        atpB NONE
        atpE 3750054 .. 3750085 -    -3  -3.67481   TCAGACATAAAGCAA      TGGCGAAGGTTCTCT TGG AATGATC-TTCGCCA      TTTTTAGTTCATATA  49 53
        atpF NONE
HC662_RS18970 NONE
        atpA 3747331 .. 3747357 - -13.2  -4.57569   TCATCTGCGTAAAAA         GAGAGAAAAAGA GAA CCTTTTTCTCTC         ATCAGCATTCGAGTT 100 39
HC662_RS18960 3746441 .. 3746453 -  -6.2  -3.59979   TCTTTCTATTCTAAA                GCGG CTGCT CCGC                CGACAATTTCCGTAA  62 3
        atpD NONE
HC662_RS18950 3744533 .. 3744553 -  -9.8   -5.9873   CGATCATAAAAAAAA            TCCTTCTC TTTAT GAGAAGGA            TTTTTTTCTTATTTC 100 34
HC662_RS18940 3743641 .. 3743658 -  -2.1  -4.12188   TTATGATGTTCAAAA             CCTAT-TA AAA TAGATAGG             GAAGCTGCTGTGAAT  54 12
HC662_RS18935 NONE
        murA 3741388 .. 3741412 - -12.3  -5.95286   ACGAAAAATAAAAAA          TCAGTATGCCA GAG TGACATACTGA          TTTTTAGGTAAGTTT 100 39
      spoIID 3740177 .. 3740193 - -12.3  -3.41627   TCAGGAACAGAAAAG              GACGCTC AGT GAGCGTC              TTTTTTTACTTCTTC  90 31
HC662_RS18920 3739091 .. 3739112 - -10.9  -5.36441   TTGTTACATAAAAAA           GAGGCTGAC CTTC ATCAGCCTC            TTTTTTCTTATTTAG 100 33
HC662_RS18915 3738095 .. 3738112 -  -6.2  -5.16206   AAACCAATAGAAAAA             GGCGCC TGGGGG AGCGCC              TTCACTCAAACGATT  80 39
HC662_RS18910 3737851 .. 3737872 - -10.9  -5.03994   CCTGAGACATAAAAA           GAGCCCTCT ATAT AAAGGGCTC            TATGTTTGATTATGC  93 25
        fdhD NONE
        moaA 3735903 .. 3735926 -  -8.9  -5.52384   TTTTCATCAAAAAAA          GCTTACCGG ACAGTG CCGATAAGC           TCTTTCATTTCATAT 100 40
        rapB 3734585 .. 3734602 -  -9.9  -6.02914   TGCATATAAAAAAAA             CCATCTG GCAG CAGATGG              TTTCATCTCACACTT 100 33
HC662_RS18890 NONE
HC662_RS18885 3733658 .. 3733682 - -15.1  -5.63504   AAGTGCACAAAAAAA          GGCAGGAAACA TAT CGTTTCCTGCC          TCTTCCGTATGATTA 100 38
        urtA NONE
        urtB NONE
        urtC NONE
        urtD NONE
        urtE NONE
        ureA NONE
        ureB NONE
        ureC 3726261 .. 3726281 -   -14  -2.75992   TTTGAGTCAATAGTA            CGGCCGGA TGCAC TCCGGCCG            CGTCTTGTCAGAATA  93 33
HC662_RS18840 3725740 .. 3725765 -  -9.9  -2.57132   GTTGGCGGTGAGAAG         TCATCCCTTTT GATT AAAAGAGATGA          TTCATAACATCTTTT  74 13
HC662_RS18835 3725018 .. 3725035 - -12.7  -4.99861   TATTAATCAGAAAAA             CCCGGAG CGGA CTCCGGG              TTTTTTTATTATTCC 100 34
HC662_RS18825 3723694 .. 3723714 - -15.4  -4.11371   TAAGATGTGCCAAAA            CCCCGGCC TTTAC GGCCGGGG            TTTTTCCTGATGGTC 100 14
HC662_RS18815 3721497 .. 3721531 - -15.1  -5.63504   AATGCCATAAAAAAA     CTGCACCCTGATCTG TCCAG CAAATCGGGGTGCAG     TTCTGGTGTTCAGCT 100 46
      spoIIQ 3712268 .. 3712288 -  -5.4  -6.38492   AGTAACAAAAAAAAA            CGCCCATC ACACG GATAGACG            TTTTCTTCATTAAGA 100 35
HC662_RS18760 3711736 .. 3711763 -  -9.2  -4.94487   CTAGAAAAGACAAAA        GCCGGC-GTCT GAATCCA AGACAGCCGGC        TTTAAAATTTTTCGT  91 27
HC662_RS18740 3708606 .. 3708621 -  -3.2  -3.25787   TATGTAATAGTAACA              GGTCGT GCAT ACGAAC               AGACCGGCAAGCACT  48 57
HC662_RS18735 NONE
HC662_RS18730 3706503 .. 3706543 - -17.2  -3.66803   TTTGAACAGTCTAAA  CAAGAAAAAGAGACAGAC GCAGT GTCTGTCTCTTTTTCTCA  TGATGCAGTTTTCAT 100 23
        pucI NONE
HC662_RS18720 3703338 .. 3703374 - -19.5  -4.96848   TTTTGCATATAAAAA    GCGGCGTCCTGCTCCGT TGA ACGGAAGAGAACGCCGC    TAATGGCATATTATT 100 36
HC662_RS18705 NONE
     spoIIID 3700879 .. 3700889 -  -5.4  -3.04517   ATCCTCCTTGAAAAT                 CTGT TTC ACAG                 TAAATATCCACATTG  53 170
         mbl 3699822 .. 3699844 -  -8.5  -5.60993   TTTTTCATAAAAAAA           CCCCATTCT TTTTC AGAATGAGG           TTTGTGAAATCAGCT 100 35
        flhO NONE
        flhP 3697840 .. 3697850 -  -6.8  -5.10154   ACTTAAAATTAAAAA                 CGCT TGA AGCG                 CTCTACACATCAGTT  87 214
        fabZ 3696302 .. 3696327 -  -6.1  -5.26875   TTTTGAATGAAAAAA         GACAAATGTGC CGCT GCTCATCTGCC          TTATTTCAGTTATTC  84 35
        mscL 3695844 .. 3695867 - -13.2  -6.20267   TTAAAAATAAAAAAA          GACCGCCGTT TCAG AACGGCAGTC           TTTTTTATTCCGGCG 100 30
HC662_RS18660 3691436 .. 3691464 - -11.8  -4.97405   ATGTACAAAAAGAAA        GCCAGTGTGC ATTGATAGG GCACACTGGC        TGGATACGGCTTTTT 100 55
HC662_RS18655 3685175 .. 3685205 - -12.1  -5.03314   GTCACTTTTAAAAAA      GCACCTGATCGATT CTTC AAT-GATCAGGTGC       TTTCATATTTATCCC 100 34
HC662_RS18650 3684395 .. 3684418 - -15.4  -5.14563   TTCTGCATTAAAAAA          GACTGCCGTT AGGA AACGGCAGTC           TTTTTTCTGTAAATA 100 70
HC662_RS18635 3682591 .. 3682601 -  -3.2  -3.38674   AAAACGCTTAAAAAT                 GACT TTC AGCC                 TCTGTTTTTATCTTT  49 20
         ssb 3682087 .. 3682103 -    -8  -5.93252   CCTAAAAATAAAAAA              CCAGTC TGGTC GACTGG              TCAGTTTTGAGGGGG 100 100
        glcR NONE
HC662_RS18620 3680207 .. 3680228 - -12.3   -4.0802   AGCGCAATAATTAAA           GCTGGCTCC TAAA AGAGCCAGC            TTTTTTCCGTTCATA  95 116
HC662_RS18605 3675465 .. 3675485 -  -8.3  -6.09888   CTCGAATAAAAAAAA            TCCCGCA AAAAGCG TGCGGGA            TTCTTATGTTGCATA 100 29
        tkmA NONE
HC662_RS18595 3673780 .. 3673808 - -11.9  -4.56597   CTTTTTTCGCAAAAA        TAAATAACGGGCA AGA TGCACGTTATTTA        TTTTGTATGAAATTT 100 19
HC662_RS18590 3672815 .. 3672829 -  -5.6  -2.85503   CTCCAACAGTTAAAT               TGCTGC TTT GCAGCT               TTCGTATTATCGTAT  52 184
        uglF 3671440 .. 3671454 -   -10   -5.9362   TAAAATAGAAAAAAA               CTGGCT TCC AGCCAG               TTTTCTCTTCTCCAA 100 41
HC662_RS18580 NONE
HC662_RS18575 NONE
HC662_RS18570 NONE
HC662_RS18565 3667981 .. 3668003 -  -8.5  -5.42259   CTATTTGTAAAAAAA          CTTGCCGATG ACAA CA-CGGCAAG           TTTTTAACTATAGCA 100 33
HC662_RS18560 3667255 .. 3667266 -  -2.2  -3.24858   GAAACAATGAATACA                GTCGC TTA GCG-C                GTAATACTAGCAACT  45 46
HC662_RS18555 3666194 .. 3666209 -    -9  -5.42259   TCATTTGTAAAAAAA              GCACCT AGAG AGGTGC               TTTTTTCTTTTGGCC 100 188
         ggt 3662350 .. 3662377 - -14.2  -5.24129   GTTGCCTATAAAAAA        TAACCCCCGGAG AAAG CTTCGGGGGTTA         TTTTATGAAACATTT 100 430
HC662_RS18515 3659446 .. 3659458 -  -3.4  -2.84125   TGGATATATGCAAAT                CGTT AAATG AACG                GAAATAAAAAAAGGC  44 72
        alsS NONE
        budA 3655844 .. 3655868 -  -6.5  -5.31519   AGAGCCAAATAAAAA          GAAAGCCCT GCACAAA AAGGCTTTC          TTTTTTCTTTTATTC  88 35
HC662_RS18495 3654765 .. 3654790 - -10.5  -3.93619   ACAAAATAACTGAAA         GGGATTCCG TGTCTATG CGGAATCCC          TTTTATTATGAATTG  85 487
        pgsB NONE
        pgsC NONE
        pgsA NONE
HC662_RS18435 3644653 .. 3644676 - -10.4  -5.27335   CTGGGCAAATAAAAA          GAGAATGTCT CATC AGACACTCTC           TTTTTTGAATTATTT 100 35
        pgdS 3643105 .. 3643145 - -13.7  -3.51708   GAGTCTTCAAATTAA  TGACAAAATCCTAAAAC GGTTTTT ATTTTAGGATTTTGTCA  TTTTTTTAACGTGAT 100 184
HC662_RS18415 3639350 .. 3639371 - -13.7  -4.46615   GATGAGCAATCAAAA           GGGTGCGCA TGAT CGCGCACCC            TTTTTTATGTTCCGA 100 30
        manA 3634417 .. 3634439 -  -9.3  -6.09888   TTTTAATAAAAAAAA           CTTAATCTC GAAGT GAGATTAAG           TTTAAATATGAGACA 100 27
HC662_RS18390 3631639 .. 3631662 -   -14  -5.08367   AAGATAAATGAAAAA          CACCTTTTGC AGCT GCAAAAGGTG           TTTTTTTTATTGATA 100 32
        tagD 3623844 .. 3623864 -  -5.5  -5.94214   AACACAAGAAAAAAA            GAAGCAACT TTG AATTACTTC            TATAAAAAATAATCT 100 43
HC662_RS18350 3622579 .. 3622596 -  -3.5  -2.54841   CTCCAATAAAACTAC             TTTGTCT TTGA AAACAAA              CTTTCTACTACTCTT  43 4
        rfbA NONE
        rfbB 3620581 .. 3620611 -    -9  -5.14563   CTTTCCATGAAAAAA       TCCCCGGACCTTCA ATG TAAAGGTTTGGGGA       ATTTTCCGTTAAATC  91 42
HC662_RS18335 3619981 .. 3619991 -    -4  -2.92792   ATTTACTGCAAAGGA                 TTGA ATT TCAA                 AGCCATAAGATTTTT  47 2
HC662_RS18330 NONE
HC662_RS18325 NONE
HC662_RS18320 NONE
HC662_RS18315 3614155 .. 3614186 -   -14  -3.46647   CTCATTGACTAAACA      TGA-AAAGCTGCTGA AAC TCAGCAGCTTTATCA      AAACTGAAGTTATTA 100 38
        tagG NONE
        tagH 3611579 .. 3611604 - -12.7  -5.29846   AAGTTTAAATAAAAA         GGCTATTGGAC AATC ATCCAATAGCC          TTTTCCTAATTTGAA 100 31
HC662_RS18295 NONE
HC662_RS18290 3607379 .. 3607393 -    -5  -4.07885   TATTTCTTCTCAAAA               GCTCAT ATA ATGAAC               AAGAATGGTATAGAA  63 46
HC662_RS18285 NONE
        wecB 3604233 .. 3604259 -   -16  -5.95449   AAATAAAATAAAAAA         GAAGCTTCGCAC AGT GTGCAAAGCTTC         TTTTTTATTTTCCTG 100 30
HC662_RS18270 NONE
HC662_RS18265 3600544 .. 3600560 - -13.7  -3.51858   CAAATAACGAACGAA              GGAGGCG TAT CGCCTCC              CTGGATTTCTTTTCT 100 50
HC662_RS18260 3598947 .. 3598983 - -14.4  -5.26316   TTATCGTATAAAAAA    GCTTGCCGGCAATTCC TGATG GGTTCTGCCGGCAAGC    CGCTATTAACGTATA 100 52
HC662_RS18255 3596843 .. 3596870 -  -6.4    -5.626   TATTGTATAAAAAAA        GAGACAAACC ATTTTACA GATTTGTCTC         TTTTCGCTGCAAGGC  90 43
HC662_RS18250 NONE
HC662_RS18245 NONE
HC662_RS18240 NONE
        tuaD NONE
HC662_RS18230 NONE
HC662_RS18225 NONE
HC662_RS18220 NONE
HC662_RS18215 3587589 .. 3587614 -  -2.6  -3.78682   GTATAATCAAAAAAC         GCGCA-TCCCA ATTTA TAGGACTACGC         ATGTTTTTGAATCCC  51 20
HC662_RS18210 3586365 .. 3586384 - -10.7  -5.60993   TTGTGCAGAAAAAAA            CTCCGGC AATTGA GCCGGAG             TTTTTAATTCCTTTT 100 29
        degS NONE
        degU 3582334 .. 3582357 -  -9.6  -5.44119   GGCAGCCTAAAAAAA          GACCTGCCTC ATAA AAGGCAAGTC           TTAATTTCTACTATC 100 36
HC662_RS18185 3581397 .. 3581417 -  -7.6  -5.86465   AAGAATATAAAAAAA            TCTCCGCT GCTAA AACGGAGA            TTTTGCGTTATTTAA 100 33
HC662_RS18180 NONE
       comFB NONE
HC662_RS18170 3578874 .. 3578892 -  -3.1  -4.84761   ATATCGGCATAAAAA             CAGAATC ATTTA GCTTCTG             ATCAAGGTAAAAGAT  67 16
HC662_RS18165 NONE
        flgM NONE
HC662_RS18155 NONE
        flgK NONE
        flgL 3575086 .. 3575104 -  -3.1  -5.75599   TAAACTATAAAAAAA            GCGAACTC CTAA GAGC-CGC             TTACTTTAAAAAGTC  88 26
HC662_RS18140 3574456 .. 3574472 -    -3  -2.53164   GTACTTAGTATGAAT              GATCAT TGTTC ACGATC              CTTTTCTTTTTACTT  41 48
        fliW NONE
        csrA 3573809 .. 3573829 -  -6.9  -6.23317   ACAAAAATAAAAAAA            TCCTCAC TTTTTTT GTGAGGA            TAATGCGGAGATCAC 100 8
         hag 3572725 .. 3572746 -  -6.5   -5.2894   AAATATAAAATAAAA           GACCCCGGC TAAC ACCAAGGTC            TTTTTTAAAATTAAC  88 36
        flaG NONE
HC662_RS18115 3570674 .. 3570686 -    -2  -2.73124   TGTCATCCTCCAAAT                TACA TTTAT TGTA                CAAGAAGCTGTGATA  41 18
        fliS NONE
HC662_RS18105 NONE
HC662_RS18100 NONE
         hpf 3568739 .. 3568761 - -11.3  -5.74684   TAAGAAAAACAAAAA           CCTTCCGCG GACAT CACGGAAGG           CTGCTCTTCATTATT 100 36
        prfB 3564876 .. 3564898 -  -9.2  -5.46129   GAAGAAATTAAAAAA           CACACCTG TATACAT CAGGTGTG           TTTTCTGCTTATGAA 100 34
HC662_RS18080 NONE
HC662_RS18075 3563475 .. 3563498 -  -8.2    -5.626   CATGGCATAAAAAAA          TCCTTGCCTGC ACT GC-GGCAAAGA          TTTTCTTATCTTACT 100 36
        ftsE 3562595 .. 3562605 -    -4  -2.76453   CGAGAATTTTAATCA                 TATG AAC CATA                 CTCCCCTCTTGACTC  45 8
        ftsX 3561673 .. 3561694 - -10.8  -5.13343   GAAGGCAAAAGAAAA           GCCGCCCC TGAAGC GGGACGGC            TTTTTTCTCTTTATA  93 36
        ctpB 3560101 .. 3560120 - -12.2  -3.91213   AAGCATAAAGAAACA            GGAGATGG AATA CCATCTCC             TTTAATTGACAAATA  95 27
        swrA NONE
HC662_RS18050 3558068 .. 3558107 - -25.9  -3.67611   CTCAGCGTAACACAA  GACAGCCCGGCACCACA TCTTCT TGCGGTGCCGGGCTGTC   TTTTATGATCCGGAC 100 28
HC662_RS18025 3552252 .. 3552276 - -11.6  -5.28176   TTCATGTATAAAAAA          CCTGCTTTTA AAACG TAAAAGCAGG          AATTCAGTCGTTATA 100 57
        uvrB NONE
        uvrA 3547193 .. 3547231 - -11.1  -4.78237   TATGCCATAAGAAAA  GCTTGCCTGCTAAGCCCA AGGA TGGACTT-GCTGACAAGC   TGAACTCTCTCTAAA  91 50
         hag 3545957 .. 3545996 -  -7.9  -5.80364   ATTGTAACAAAAAAA  GCCTGCCGGCATA-TCCA ACTAA TGGACTCTGTCGGCAAGC  TGTGACTACCAGAAA 100 61
HC662_RS18000 NONE
HC662_RS17995 NONE
HC662_RS17990 NONE
HC662_RS17985 3543336 .. 3543355 -  -7.8  -5.13473   ACCACATGTAAAAAA            GCTGCCTT CTGT ATGGCAGC             TTTTTTATTTCTTTC  91 30
HC662_RS17970 3537517 .. 3537543 - -14.6  -5.60993   GCTTTCATAAAAAAA         TCTCCAACCCTT TTT AAGGATTGGAGA         CATGGCGAAAATCTA 100 12
HC662_RS17950 NONE
HC662_RS17945 NONE
HC662_RS17940 NONE
        ppaX NONE
        hprF 3530761 .. 3530799 - -13.4  -4.19953   TACTCAATTTTAAAA   TAAAAAATCCCGCTGA TGTTTAT TCAGCGGGACTTTTCA   ATCTTGCTTGCATTT 100 6
HC662_RS17915 NONE
HC662_RS17910 NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
HC662_RS17880 3521968 .. 3521993 -  -9.1  -5.50723   TGATGAAAATAAAAA         TCTCCCACTCA TGGT TGAATAGGAGA          TTTTTTCATATTGTT 100 458
        bmrA 3520015 .. 3520037 -  -8.5   -4.1964   CTCAATAGTTCAAAA           GGAAGGATT GGGAA AATCCCTCC           GCTTTTTTACTGGCT  79 55
HC662_RS17870 3518454 .. 3518476 - -11.4  -5.99154   TACTAAATAAAAAAA           GAGTCGATTC TAC AAATCGACTC           TTCAAAATATTCTAT 100 37
        cwlO 3516660 .. 3516683 -  -8.9  -4.68209   ATGTTAATAAAGAAA          GAGCCTTCT GTTCAT AGAAGGCCC           TTGTCTTATTTATTA  86 38
        trxB 3515372 .. 3515399 -  -3.5  -5.60993   TTTTGGACAAAAAAA        GGACACGGAT AACTGGAGA ATCCGTG-CC        AAAAAAGTGTATTCA  81 153
HC662_RS17855 NONE
        rapZ NONE
        mgfK NONE
        whiA NONE
HC662_RS17835 NONE
HC662_RS17830 3510814 .. 3510834 - -11.2  -5.18726   TGTTCATAAGAAAAA            GCTTGCAG ACATG CTGCAAGC            TTTTTACGTTACAAA 100 34
        psdR NONE
HC662_RS17815 3508626 .. 3508643 -  -3.3  -4.91109   TCTTTATTATAAAAA             GGAAGTC AGCA GCCTCCC              ATCGAACTTTCTTTC  69 58
        psdA NONE
        psdB 3505871 .. 3505891 - -15.5  -5.09521   TCAATAAATCAAAAA            TCCGGTCTG ATC CAGACCGGA            TTTCATATTACATAT 100 33
HC662_RS17795 NONE
HC662_RS17790 3502265 .. 3502281 - -10.8  -5.64274   GCATGCATAAAAAAA              GCGGCC GCATT GGCCGC              TTTTTTTAACCTGTG 100 31
HC662_RS17780 3501092 .. 3501113 - -11.7  -5.25805   AAGAAATTTAAAAAA           GAGATTTCC TTTA GGAAATCTC            ACATTGTCAAAAAAC 100 158
HC662_RS17775 3500037 .. 3500047 -    -4  -3.76568   TTACCGATAACAGAA                 TAAG GCT CTTA                 CAGAGTTGATTCGCG  55 23
HC662_RS17770 3498171 .. 3498184 -  -5.9  -2.69179   ACAGAATTTAAACAG               GGGCG GCAG CACCC                AAAATAAAAAATTCT  54 4
HC662_RS17765 3496451 .. 3496471 -   -14  -2.74461   TATTGACCTCCAAAC            CCGCCGCT TTCAT AGCGGCGG            TCTTACGCGAATCAT  93 369
HC662_RS17750 NONE
HC662_RS17745 NONE
HC662_RS17740 NONE
        pgmB 3488801 .. 3488820 -    -5  -4.56597   GCTGCCGGCGAAAAA            GGCAAACGC TAT GCGCTT-CC            AAACAGTGAAGTCAT  70 349
HC662_RS17725 3488061 .. 3488084 -   -14  -3.79995   TTAATCATAAGATAA          GGGCATATAC ATCT GTATATGCCC           TTGCCGTTAAGCGTC 100 283
HC662_RS17675 3478544 .. 3478569 -   -12  -5.67967   AGGAGCATAAAAAAA         CAAGGACTGT TTGTAG ACAGTCCTTG          TTAGCTTTGATAGGC 100 26
HC662_RS17670 NONE
        padC 3477436 .. 3477469 -  -9.8   -5.3104   TCAGCAAAAAGAAAA    CCCGGGA--AAGAGAA GTAA TTCTCTTTATCCCGGG     TTTTTTCTGTTTTTT 100 39
HC662_RS17650 NONE
        mdxG NONE
HC662_RS17640 NONE
HC662_RS17635 NONE
HC662_RS17630 NONE
        pgmB 3469146 .. 3469165 -    -5  -4.56597   GCTGCCGGCGAAAAA            GGCAAACGC TAT GCGCTT-CC            AAACAGTGAAGTCAT  72 349
HC662_RS17615 3468423 .. 3468453 -  -4.1  -5.88476   AAAACAAACAAAAAA      GACAAGAG-C-GGCA AAA TGCCAAACCCTTGTC      TTTCCTGTTGTTCTA  93 46
HC662_RS17610 3467779 .. 3467802 -   -14  -3.79995   TTAATCATAAGATAA          GGGCATATAC ATCT GTATATGCCC           TTGCCGTTAAGCGTC 100 32
HC662_RS17570 NONE
HC662_RS17565 3458263 .. 3458288 -   -12  -5.67967   AGGAGCATAAAAAAA         CAAGGACTGT TTGTAG ACAGTCCTTG          TTAGCTTTGATAGGC 100 26
HC662_RS17560 NONE
        padC 3457155 .. 3457188 -  -9.8   -5.3104   TCAGCAAAAAGAAAA    CCCGGGA--AAGAGAA GTAA TTCTCTTTATCCCGGG     TTTTTTCTGTTTTTT 100 39
HC662_RS17535 NONE
        epsB 3453273 .. 3453291 -  -7.4  -3.10894   ACGACCAGCATCTAA             GGCAGC AATATCA GCTGCC             CACAGCAGAGCCGAG  62 86
HC662_RS17525 NONE
HC662_RS17520 NONE
        epsE NONE
HC662_RS17510 NONE
        epsG NONE
HC662_RS17500 NONE
HC662_RS17495 NONE
HC662_RS17490 NONE
HC662_RS17485 NONE
HC662_RS17480 NONE
HC662_RS17475 NONE
HC662_RS17470 NONE
HC662_RS17465 3438994 .. 3439020 - -11.7  -4.80487   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG 100 7
        rpoN 3437364 .. 3437382 - -10.3  -5.41143   GATTCCTTAAAAAAA             TCCTCCC GTCAA GGGAGGA             TTTTATTTATACCGT 100 28
        lutR 3434641 .. 3434664 -  -9.6  -4.68593   TGCATCATGTAAAAA          GACTGAACCA TTTG CGGCTCAGTC           TCGGTTGTTTGTATC  88 78
        ganR 3433521 .. 3433540 -  -7.2  -5.65927   TACCTAAATAAAAAA            TGACTTAG TGTC CTAAGCCA             TTGTTAATTCATACT  93 29
        ganS NONE
        ganP NONE
        ganQ NONE
        ganA 3427878 .. 3427896 -  -8.8  -4.44211   TCGAATATAAAAGAA             TCCGCCCA TAC CGAGCGGA             GCAACAGCCTAATGT  84 34
HC662_RS17415 3426493 .. 3426534 - -13.3  -5.28942   GATTTGAAATAAAAA CATCCATGAGACATAACAA TGAT TTGTTACATCTCATGGATT  TTCTGTTTCAGCGTT 100 33
HC662_RS17400 NONE
HC662_RS17395 NONE
HC662_RS17390 3421358 .. 3421377 -  -3.6  -3.72374   CCTCAGCAATAAACA            GACGAA TCATTCTT TTCGTC             CTCCTATCATTCTGC  55 32
        yvfU 3420720 .. 3420741 - -10.9  -5.36441   CGGGCATATAAAAAA           CACTCCTGA TCTC CCAGGAGTG            CCGTGATGGTGAAAA 100 49
        lutA NONE
        lutB NONE
HC662_RS17370 3417642 .. 3417662 -   -14   -4.8622   TTTTTCAAGCAAAAA            GCCCGGCA GCACA TGCCGGGC            TTCCTGAGATCAGCG 100 35
HC662_RS17365 3416174 .. 3416213 - -15.2  -5.93252   TTCAAAAACAAAAAA  GCCCGCCGTCTC-CTATCT AAT AGATAAAGAGACGACGAGC  CTTTGGCTGACCGCG 100 343
HC662_RS17360 3414760 .. 3414782 - -12.1  -5.97979   ACAATAATAAAAAAA           CCTCTTGTC GTTGT GACAAGAGG           GTTCTCATTTACTGA 100 34
HC662_RS17350 3412807 .. 3412827 -  -4.1  -4.75219   CAATCAGGAATAAAA            GAATTTGAT TCG ATGAAATTC            GAACAATATAAAACG  68 56
HC662_RS17345 3411647 .. 3411675 -  -6.8  -5.87996   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTATAGCTGT 100 40
        araE 3408915 .. 3408938 - -13.2  -4.20368   GCATCCCAACATAAA          CAGCCCTTCC AATA GAAAGGGCTG           CTCTTTTAAAGCGTT 100 42
        cggR NONE
         gap 3406489 .. 3406513 - -12.2  -4.65895   GTCTTCATGGAAAAA          GGGAAAGGGA GTCCG TCCCCTTCCC          TTGTCCGCTTTCATT 100 92
HC662_RS17320 NONE
HC662_RS17315 NONE
        gpmI NONE
         eno 3401408 .. 3401431 - -12.4   -5.4588   TAAAAGCACAAAAAA          GCCGCCGAGA CATA TCTCGGCGGT           CATTTTATTACTTGT 100 33
HC662_RS17295 3398953 .. 3398983 - -12.7  -4.56775   ATGTTCTTTTAAAAA      CAACCCCCATCACC TGCT GGTGATAGGGGT-G       TTTTTATTGAATAGA 100 29
HC662_RS17275 NONE
       opuCB NONE
HC662_RS17265 NONE
       opuCD 3393025 .. 3393045 -  -9.7  -5.43866   GAAGCCGTAAAAAAA            CGCCCTGTC TTA AACAAGGCG            TTTTTTCTTATGCGG 100 33
HC662_RS17250 NONE
       opuBB NONE
HC662_RS17240 NONE
       opuBD 3388734 .. 3388762 -  -6.9  -5.47218   TTTTAGTTAAAAAAA        TTATATCTCCTAA CAT TAAGAAGATATAA        TTTTGTAATTCTACT  91 64
HC662_RS17225 NONE
HC662_RS17220 3386457 .. 3386482 -  -6.8  -6.36459   TTTAATAAAAAAAAA         CCCTCGTCGA GGTTAG CCGAGGAGGG          CAAATTATGCACTGC 100 65
HC662_RS17195 3384361 .. 3384377 -  -3.5   -4.7219   CATAGGAATAGAAAA              CGCTTGG CTT CCTTGCG              TTTTTTGTTACTTTA  67 38
        secG 3383162 .. 3383182 -  -5.4  -4.72486   CAGAAACGTGAAAAA            GGCCTGAC TTCAC ATCAGACC            TTATACAAACATTGC  74 42
HC662_RS17180 NONE
         rnr 3379930 .. 3379957 - -10.7  -4.41348   TGTTTCCGAAAGAAA        GCAAATAGAGC GCTGCG GCCCTATTTGC         TGGTTGAGCTGCTAT  89 37
        smpB 3379319 .. 3379351 -  -8.6  -2.92175   CGTGAACACAGTATA     GCACAG-GCCTGATT TTTG AATCAAGCACTATGC      CTTTAGAAGCCTTTT  69 28
        ssrA 3378773 .. 3378804 -   -14    -5.252   GATCTGGAGAAAAAA      TAAAGCAGAACCCTC AAA GAGG-TTCTGCTTTA      TTGTCAGTATGTATG 100 36
HC662_RS17160 3377817 .. 3377835 -   -11   -5.6473   ACAACACTAAAAAAA             CCTCTCCC AAA AGGAGAGG             TTTAAAAGACACTGC 100 27
HC662_RS17155 NONE
HC662_RS17150 NONE
HC662_RS17145 3376390 .. 3376409 -  -7.8  -5.40873   AAGACAAAAATAAAA            GCAGCGCC TAAC AGCACTGC             TTTGTCCATTTGCTT 100 13
HC662_RS17140 3376205 .. 3376226 -  -5.8  -5.75342   TGCCCGCAAAAAAAA           GCAGCGAC CATACC GTCTCTGC            CTGTTTTACATCAGT 100 31
HC662_RS17135 3374166 .. 3374179 -  -3.9  -4.72986   TAGGGGCACTAAAAA               TTACT TTCA AGTAA                AACATCTTGAATTAA  68 49
HC662_RS17130 3373396 .. 3373417 -  -9.4  -5.12172   GAGCAATAAACAAAA           GCCTCCCC AAGGAA AGGGAGGC            TTTTTCATTAAAATG  91 33
        csoR 3371850 .. 3371860 -  -4.6  -2.79796   TTTCATCCTACCATA                 CCCC CGT AGGG                 TATTACAACAAAAAA  48 46
        copZ 3371565 .. 3371590 - -11.9  -4.71307   TAAAAATGAAAGAAA         TATCGCGCCTC CCTA AAGGCGCGACA          CCTTGAATCAATCGG 100 33
HC662_RS17110 3369079 .. 3369105 - -11.7  -4.86621   AGTGTCAATGAAAAA         CAAAAACCGGC ATATG GCCGGTTTTTA         TTTTACTTTCTGCAG 100 23
        cadA 3366747 .. 3366772 -  -7.6  -5.37593   TTTCAAATTAAAAAA         GAAGCGGATC GCAATT GACCCACTTC          TTTATTTTAACAAGA 100 88
        bdbD NONE
HC662_RS17095 3365597 .. 3365618 - -10.1  -5.36441   TTTCGAGATAAAAAA           GCGCCCG GCATACAG CGGGCGC            TTTTTTGTTATTCAG 100 33
HC662_RS17090 3364802 .. 3364822 - -12.7  -5.50499   TTATATGCAAAAAAA            CCGATTTCA AAT TGAAATCGG            TTTTTTAATGTTAGT 100 36
HC662_RS17085 3362298 .. 3362315 -  -9.9  -5.56264   TTTAAATAGAAAAAA             GAGAAGG GTTC CCTTCTC              TTCATTCAGCATTCT 100 27
HC662_RS17080 3360354 .. 3360364 -  -6.8  -2.72012   AATCAGTATACATCA                 CGCT GAT AGCG                 TTTTTGCTGCTGCAT  56 2
HC662_RS17070 3356299 .. 3356318 - -11.4  -5.63374   CTAATATTAAAAAAA            GCTGGCGC ACTA ACGCCAGC             TTTTTTGCTGCTTTT 100 39
        pgoN 3354708 .. 3354753 -    -7  -5.80817   TTCAACAGAAAAAAA CACACTAAAAAACTCCCCGT GCCGTG ACGGGGAGTTTTTCATTAAA ACAGAAGCTCGTCGG 100 21
HC662_RS17045 3352210 .. 3352227 -  -9.9   -5.5112   TTTATGAATAAAAAA             TCCCTCT TTAC AGAGGGA              TTTTTTACGTTTCAA 100 30
        sspJ 3349432 .. 3349458 - -17.4  -4.28375   GGAACAGATGGAAAA         TGCGGATAGAGC CAA GCCCTATCCGCA         TTGTGGTTTATCGAT 100 33
HC662_RS17025 3347624 .. 3347650 -  -8.8  -5.24129   CGTTTTTATAAAAAA         GACACCTGAC AAAGCAA ATCAGGTGTC         TTTTGTTATGCTTAT 100 37
HC662_RS17015 NONE
HC662_RS17010 3344101 .. 3344112 -    -3  -2.57564   TGATCTGTTGATAAT                GAAT TCAT ATTC                 GGCCCCCTCCTCTAA  41 37
HC662_RS17005 3343274 .. 3343292 -   -11  -5.79595   GCCGAAAATAAAAAA             TCCCGGCT CAG AACCGGGA             TTTTTCTCACACTGA 100 32
HC662_RS17000 NONE
HC662_RS16995 NONE
HC662_RS16990 3340010 .. 3340034 -   -13  -5.47218   TCCCAGCTAAAAAAA          GAACGCATTC CAATT GAATGCGTTC          TTTTTATTCATAGCG 100 29
        sigO NONE
        rsoA 3337086 .. 3337105 -  -9.3  -5.73978   ATGACAAACAAAAAA            CGGGAAC ATGGAA GTTCCCG             TTTTTTCGTATTTTC 100 50
        yvrH NONE
        yvrG NONE
HC662_RS16950 3333555 .. 3333575 - -12.6   -5.1615   GTAATATGCAAAAAA            CGCATCCG TATTT CGGATGCG            TTTTTTTATACGTCT 100 31
HC662_RS16940 NONE
HC662_RS16935 NONE
HC662_RS16930 3329066 .. 3329076 -  -2.4   -3.6806   ACAGACTTATTCAAA                 CAGC TCT GCAG                 CCTCTTTTACCAATT  48 6
HC662_RS16925 3328414 .. 3328438 -  -7.8  -5.95286   ATGAAAAACAAAAAA          GCCGGCATGT AGGGA ATACGCCGGC          TTTTATTTTCTCTAT 100 41
HC662_RS16920 3326978 .. 3326998 - -12.6  -5.72616   ATGGACACAAAAAAA            CGCCATGC ACGCG GCATGGCG            TTTCAAAACCCTTTA 100 38
        liaI NONE
HC662_RS16910 3325731 .. 3325748 -  -6.3  -3.17194   ACGTGCGGAAGGGAA             GGACTTG ACCG CAAATCC              TTCCCCGTTCCGCTT  57 39
HC662_RS16905 NONE
        liaF NONE
        liaS NONE
        liaR 3322104 .. 3322120 -  -4.4  -3.80537   AAGAAATTGAAAAGA              CAGTCG AAAAA CGACTA              GACGAAACTGTAACC  56 243
HC662_RS16870 NONE
        fumC 3316909 .. 3316929 - -15.5   -3.8397   ACATATTTAGAAGAA            CGGCTGCTT TAA AAGCAGCCG            TTTTTTCTTTCTATT 100 39
HC662_RS16855 3315193 .. 3315203 -  -2.6  -5.61596   AGCTGGAGAAAAAAA                 TAAA GGA TTTA                 TTATATTTAACAAAG  82 519
        htrB 3311948 .. 3311970 - -13.5   -5.9873   TTAGGATAAAAAAAA           GCTGAACCC TTTTC GGGTTCAGC           TTTTTGATTACCGCT 100 40
HC662_RS16825 3308588 .. 3308610 -  -8.3  -4.48792   AGAATTGAAAAAGAA           GCCGAGGCA ACTTA CGCCACGGC           TTTTCTTTAAGATTC  83 32
HC662_RS16820 3307999 .. 3308013 -  -3.6  -4.35042   TGTAGCAGAAAACAA               TGACTT TGA AAATCA               TTTTCAATTAGTTTT  62 80
HC662_RS16815 3306976 .. 3307011 -   -12  -5.40072   TCCTTTCGAAAAAAA    CAGCAAGGAGCTTTCTC AGG GTGAAAGCTCCTT-CCG    CTGGCGTTATTTATC 100 36
HC662_RS16810 3306672 .. 3306697 - -10.5  -5.32882   CAGCATCACAAAAAA         GCAGTCTGC TCTGATTG GCAGACTGC          TTTTTTAGCTATTGT 100 34
HC662_RS16800 NONE
HC662_RS16795 3304494 .. 3304517 -    -8  -4.70583   CCCATTAATAGAAAA          CTCCGCGGGT ACCA ATCCGCGGGG           TTTTTTTATTGTATC  84 31
HC662_RS16770 3300447 .. 3300463 -  -6.5  -3.81948   GAAGCCTATAAAAGA              CGGGC AACTTAA GCCCG              GAGGTGAAGGGAATG  67 209
HC662_RS16760 NONE
HC662_RS16755 NONE
        fadE 3294920 .. 3294937 - -12.7  -5.40072   TGCTTCTTAAAAAAA             GCTCCGC ACAT GCGGAGC              TCTTGGGCAATCAGA 100 36
HC662_RS16745 NONE
        gcvH 3293976 .. 3293993 -  -2.7  -2.64155   GTTTGCTGAAAGCCA             TATTGGA CACC TCCCATA              ACGTTAGCGTGTCCA  41 64
HC662_RS16735 3293717 .. 3293735 -   -11  -4.20817   CAGATTGTAAAAGAA             GGCAGTGA AAT TCACCGCC             AACATTAACACCAGC  88 30
HC662_RS16730 NONE
HC662_RS16725 3292951 .. 3292961 -    -4   -3.6052   TAAAACGAACGACAA                 TTTC ATT GAAA                 TGTGCTGAGAAATAT  53 42
HC662_RS16720 3292259 .. 3292286 - -14.2  -5.07652   TTCTGCAAAAGAAAA        GCCTTTCTGCAC ACTT GAGCAGAAAGGC         TTATATAAAAATGCC 100 265
HC662_RS16715 NONE
        metP NONE
        metQ 3289595 .. 3289635 - -22.9   -3.6581   ATCACGCTGAAAAGA  TGACAAAGCCCTAAAACGA TAT TCGTTTTAGGGCTTTGTCG  AAAATTGAATCCCGG 100 64
HC662_RS16700 3288957 .. 3288968 -  -2.2  -2.63479   AATAGCGGCAGATGA                GACG AAAG CATC                 CTTTTAGATCAAATG  40 69
HC662_RS16695 3288647 .. 3288662 -  -6.8  -5.63236   ATTGAAAAAGAAAAA              GAGTGG ATTC CCACCC               TTTTTTAAAGATTAT  90 45
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB 3283195 .. 3283221 - -19.6  -5.57888   ACTAAAAAAATAAAA         GGAGGCGAACTT CAA AAGTTCGCCTCC         TACACACGAAATCGG 100 107
HC662_RS16665 3282507 .. 3282525 -  -3.8  -3.02511   GGTACTGTGCTAACA             GTCTGGCT GCC AGCAAAAC             AACCCGCACATTTGT  47 68
HC662_RS16660 3281935 .. 3281961 -   -13  -4.96848   TCCTGCATACAAAAA         GGACGCGACTGA AAA CCAGCCACGTCC         TTTTTTATGAAAGAA 100 137
HC662_RS16645 3280149 .. 3280159 -  -3.2  -5.24647   AGACAGAAAAGAAAA                 GCTA GAA CAGC                 TTTATTATATTTGTT  75 51
HC662_RS16640 3279662 .. 3279686 - -13.7  -4.55128   ATGCCCAAATCAAAA          GCCAGAACTTA ACA TAAGCTCTGGC          TTCGCTGTTCAATCC 100 54
HC662_RS16635 3278457 .. 3278484 -   -13  -2.62184   CTCCTCTGGACATTA        GACTATAATGTT ATAT AACATTATAGTC         TAATGCATAATGGTT  89 54
HC662_RS16630 3277133 .. 3277157 -  -8.7  -4.82901   TCTCCTTTATAAAAA          GAAAAGGTG CAAAGCT CACCTTTTC          TTTGATTTATTCAGC  88 32
HC662_RS16625 NONE
HC662_RS16620 NONE
HC662_RS16615 3273997 .. 3274008 -  -2.2    -5.055   TCAACCGGCAAAAAA                CCGA AGCA TCAG                 GTGCTGTCCCATGAC  70 473
        ugpC 3272392 .. 3272413 - -14.5  -5.06414   TGGCCGTAAGAAAAA           GGTGCTCCT TTTA AGGAGCACC            TTTCCTAATACACAG 100 30
        allC NONE
        pucG 3268056 .. 3268076 - -13.3   -5.1287   CGTATAGCTAAAAAA            GCTTGCGGA GTT CCCGCAAGC            TTAGATTGTTGACAA 100 233
HC662_RS16580 3266850 .. 3266864 -  -2.8  -3.23219   AACACTCCGATAATA               TAGGAG CTT CTCATA               CAACCGCCAGCCGTT  46 21
        pucB NONE
        pucC NONE
        pucD NONE
        pucE 3262652 .. 3262672 - -12.6  -2.81547   TTCTCAGACTAATGA            GTCCGGCT TTAAG AGCCGGAC            TTCATTTTCTCACTG  90 13
HC662_RS16550 NONE
HC662_RS16545 3260708 .. 3260729 -  -3.6  -5.60993   TTTCGCATAAAAAAA           CCCCCGGT TTATTC ATCGAGGG            TATATTTTTATGCTT  83 422
HC662_RS16525 3256803 .. 3256823 - -11.9  -4.58395   TGGATTGTGTAAAAA            CCCCACCTT AAA AAGATGGGG            TTTAACAGGATAATA 100 176
HC662_RS16520 NONE
HC662_RS16515 3255671 .. 3255681 -    -4  -5.16132   TACATCAAAAGAAAA                 TCTT CCT AAGA                 ACCTCACCCAAAGTG  79 427
HC662_RS16485 3252262 .. 3252284 -  -5.7  -3.25719   GGATTATAGGAGTAA          TCGATCTTCA GGTT TGAAGA-CGA           TCTGAAGCAATATGA  56 138
HC662_RS16475 3250873 .. 3250891 - -13.1   -3.4409   AAGAAAAAGGAGGAA             GCCCGCC GGTGA GGCGGGC             TTAGATGATGTTCAG 100 159
HC662_RS16445 3243096 .. 3243117 - -17.3  -5.72207   CGGAAATCAAAAAAA           CCCGGCGGT AAAA ACCGCCGGG            TTTACGAAGGAACGA 100 27
HC662_RS16440 NONE
HC662_RS16435 3241797 .. 3241810 -  -2.3  -4.64861   CTTTTCTAAAATAAA               TCGAG CTGT CTCGG                AGCAAGTCCGCTGTA  61 2
HC662_RS16430 NONE
HC662_RS16425 3239484 .. 3239516 -  -2.1  -2.74012   TTACCACGTCAACCA     CTCCCTTCATTCAT CACTTT ATG-ATGAAGGGCA      CAGCTTGTTGTGGGC  41 49
HC662_RS16420 3239106 .. 3239145 - -10.2  -4.63486   ATCTTGGCAAGAAAA  TCCCCCCTTACATATCACA ATG TATGCT-TGTAAGAGGGGA  CATAGTAATAGCCGG  89 50
        yunB 3238307 .. 3238339 - -13.5  -4.61916   AGAAAAAAGAAATAA      CAAAAAGCCGCCTCT TCG ACAGGCGGCTATTTG      CTGCTTTTTTCATTT 100 19
        lipA 3236173 .. 3236201 - -14.7  -2.82291   AATCGACAGGAATGA        CAAAAACGCCAGA TGA TCTGGCGTTTTGG        CATTATGCTTGTGCT 100 28
HC662_RS16395 NONE
HC662_RS16390 NONE
        nucF 3233893 .. 3233913 - -11.8  -3.92996   CGGCACACAGAATAA            GGGCACCC TTTTG GGGCGCCC            TTTTTTAAATGTATG  90 30
       cotNH 3232128 .. 3232140 -  -4.8  -3.21276   CCTGTTTTGACAAGA                CAGC AATCG GCTG                AATTTTACGAATGTA  52 105
HC662_RS16370 NONE
HC662_RS16365 NONE
HC662_RS16360 3228697 .. 3228723 -  -6.5  -5.31275   CTCCAGCAGAAAAAA        GCGC-CCTCCGC TGAC GCTGAGGAACGC         TTGGCATGATCTATA  88 36
HC662_RS16355 3226618 .. 3226645 - -16.4  -3.10244   TCTTTTAATAAAGCA        GCCAGGCTGATA TTTC CATCAGCCTGGC         TTTTTTTTTAGAGAT 100 33
HC662_RS16345 3225849 .. 3225867 - -13.2   -3.9467   AATTATAGAGAAGAA             CCGCTGAT CAT ATCAGCGG             TTTTCTGCATACCCA 100 19
HC662_RS16335 3224247 .. 3224262 - -10.4  -5.86976   TGACAAAATAAAAAA              GGGCCT GTCC AGGCCC               TTTTCTTCAAAACAT 100 32
HC662_RS16330 3222880 .. 3222913 - -17.7  -2.87132   CCCGTTTTTCATACA     TAAAAGCTCCTTGCA CTGA CGCAAGGAGCTTTTA      TCGTTTATATAAACA 100 30
HC662_RS16325 NONE
HC662_RS16320 3221364 .. 3221400 -   -11  -5.21236   AAGCCATAATAAAAA    CGCCTCCCTTAACGAT GATTT ATCGCTAAGAAAAGCG    TCATGAACAATCTAA 100 125
HC662_RS16315 NONE
HC662_RS16310 3219708 .. 3219742 - -15.1  -4.80656   ATTAATAATACAAAA    GCGCCAAGTC-AGCGG TTTT CCGCTTGACTTGGCGT     TTACTGTTATTAGCA 100 84
HC662_RS16300 3218268 .. 3218293 -  -6.9  -6.01369   TAAATAATAAAAAAA         GGAGTTTGTGTC AAC GACACAG-CTCC         TTTTTTTATTTGAAG 100 31
HC662_RS16290 3215692 .. 3215705 -  -9.5  -5.09762   TTTCAATAAAGAAAA               CCCGC TTCC GCGGG                TTTTTAGAAAAACTT  91 29
HC662_RS16285 3215340 .. 3215390 -  -5.5  -3.43071   TGGCAGACTAATCAA CCTATCCCACCCCCTGCGTTA TTTTTAGTG TAACGCGGGGGCTGAAATAAA GTCAACGGCTGGAAA  57 27
HC662_RS16280 3214994 .. 3215013 -  -9.4  -5.33866   GAAAGGCACAAAAAA            GCTTTCTT TTAG AAGAAAGC             GGCATTTAAAACATT 100 31
        spsC 3214234 .. 3214255 - -15.9  -5.08824   TTTTCATGTAAAAAA           CGCTCCAGC AGTT GCTGGAGCG            TTTTATTCTTTCACA 100 28
HC662_RS16265 3212061 .. 3212085 - -10.7   -5.4505   TTTTGGAAGAAAAAA          TCCCTGCCGTA TAC TGCAGCAGGGA          TTCATCATTATTCGC 100 33
HC662_RS16260 3210586 .. 3210619 - -15.4  -2.86271   TTTTTACCATAATGA     GAAAAGGGCTCCCC AGTAAA GGGGAGCCTTTTTC      CTATAAAACAAGCGC 100 26
HC662_RS16250 3209159 .. 3209182 -  -5.4   -5.4505   TTCCCGAATAAAAAA          GGCACCTTCAT CAA AT-AAGGTACC          TGAAGACTACCGATA  83 92
        besA 3208153 .. 3208171 -   -11  -3.44146   CGTTTTTAGAACCAA             GGCTGAGA ATG CCTCAGCC             CATTGAAATATGCGG  83 20
HC662_RS16240 3207201 .. 3207212 -  -2.2  -3.16475   GAGTTACACACCTAA                GGTCG CGC CG-CC                ATCTACGCATAAATT  43 2
        dhbC NONE
HC662_RS16230 NONE
HC662_RS16225 3203367 .. 3203379 -  -2.6   -3.0353   CCTTTTATAAATAAT                CCGC GTTTG GCAG                CACTTGCTGGCTGCG  43 2
        dhbF NONE
HC662_RS16215 3195941 .. 3195960 - -12.2  -5.10064   CGTAAGATAGAAAAA            GAGACTGC GGCT GCAGTCTC             TTTTTTATGCGATTA 100 38
HC662_RS16195 3191757 .. 3191794 -  -9.1  -2.88861   GATCACCCTTACATA   GAAAGAGCGCCGTCTTC TCGT GAATCAGGCGCTCCTTC    CCTTTCATACTGTTA  68 38
        yukD NONE
        essB 3190078 .. 3190088 -  -2.4  -2.85985   ATAATAGACTCAAAT                 GGCG AAC CTCC                 TAACGGCCGAATAGC  41 73
        essC NONE
        esaA 3182288 .. 3182324 -   -11  -3.16088   AGAGGGTATGAAAAG    GGAAAAGGAGAGCATA CAAAT CATGATCCCCTTTTCC    ATGCTGCGATTACGC  80 35
        essA 3181777 .. 3181790 -  -3.1   -4.1347   CGGTAATGATATAAA               GTTCC ATTG GAAAC                CTCCTCCTTCCGTTC  57 82
HC662_RS16165 3181034 .. 3181052 -  -9.6  -5.93809   TTTTTATAAAAAAAA             GAGCAGAA AAT CTCTGCTC             TACAAAAACTCTTTT 100 25
HC662_RS16160 3180197 .. 3180208 -  -5.8  -2.97245   TTATGGATAATGACA                CAGG CTTC CCTG                 ATAAAACGAGGGGTG  56 143
HC662_RS16155 3179603 .. 3179616 -  -5.9  -4.10657   GGATATCGGCCAAAA               CGGCA AAAT CGCCG                GATTCGAATGTTTTG  66 311
HC662_RS16145 3178230 .. 3178244 -  -2.7  -3.44487   CATCATATGCAAAGA               GGCGC AAATG GTGCC               CGCCTATTCAGCGGG  47 29
HC662_RS16140 3177943 .. 3177970 - -11.4   -5.9218   TATACAATAAAAAAA        GCAACAGCCTCT CCGA AAAGGCTGTTAC         CCGTTAAACGACACT 100 22
HC662_RS16135 NONE
HC662_RS16130 3177155 .. 3177173 - -11.8   -5.1356   TGCCATGAACAAAAA             GACAAACG ATC CGTTTGTC             TCTTAAGGTTTCAGC 100 28
HC662_RS16125 NONE
HC662_RS16120 3175007 .. 3175033 -  -7.3  -5.38958   ATTCACAAAGAAAAA        CTGGCCTCTTCG CGAA CGAAT-GGCCAG         TTTTCTTTATTCTTC  91 32
        pdeH 3173228 .. 3173263 - -12.7  -2.72745   CTGACCGACAAACAC    CGAAAAGACCGCAAC GCTAAA GTTGTGGCCTTTTCG     CTTTGTCATATTCGG  90 435
        degQ 3172709 .. 3172724 -  -7.6  -5.98781   GAGAACGAAAAAAAA              GACTTG TTTC CAAGTC               TTTTTTACGAAATTT 100 30
HC662_RS16095 NONE
        comX 3171460 .. 3171471 -    -3  -4.33165   CTAAACTCACTAAAA                TCAA AAAA TTGA                 AACTTTGTTGTACCA  58 61
HC662_RS16085 3169158 .. 3169177 - -12.2  -5.26316   CCATTTTATAAAAAA            GACTTGGC CTGT GCCAAGTC             GTTTCCGTTATAAAA 100 44
        comA NONE
HC662_RS16075 3168041 .. 3168066 -  -7.6  -3.31603   ACTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG  67 31
HC662_RS16035 3161793 .. 3161815 -  -9.2  -5.24799   TCATAAACAGAAAAA           GAGTTCCG TCATATG CGGAACTC           TTTTTTTATCTGTTC 100 31
HC662_RS15995 3152077 .. 3152104 - -17.2  -5.37593   CCGTAAACGAAAAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 6
HC662_RS15975 3148312 .. 3148323 -    -3  -2.56122   TCCGATCAGAAAATG                CTAT CTTT ATAG                 TATATCAATTCCCCT  41 54
        kapD 3147459 .. 3147493 -  -7.9  -3.25475   GTGAACAGACCAATA     TCCCCCATCATATGG TGAAG CCTTATGATGGCGAA     GTGCCGGATTATACC  62 191
HC662_RS15950 3144260 .. 3144274 -  -7.1  -6.01369   TAAATAACAAAAAAA               CCGGT GTAGA ACCGG               TTTTTTAAGGCGTGC 100 30
HC662_RS15940 NONE
HC662_RS15935 3141539 .. 3141580 -  -3.7  -4.81551   TATGCACAGCAAAAA GGGGGTAAACTGAAAATACC AAA GGCTTTCT-AGTATTCCCCC CTTTTATTGGATGCG  68 63
        yugI 3140988 .. 3141011 - -13.2  -4.58773   TGTATTAAATCAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTTCGTGCTTAT 100 37
HC662_RS15920 3139114 .. 3139139 - -13.3  -5.74684   TAACAAAAAGAAAAA         GGGAAGCAGCC GAAC GGCTGTTTCCC          CTTTTTTATAGAGAT 100 31
HC662_RS15915 3137839 .. 3137862 - -12.5   -4.4846   CAAGTCAAGAAGAAA          GGGCGGAAT GACTGG ATTCCGCCC           TTTGGGATTATAGAG 100 33
HC662_RS15910 3136374 .. 3136396 - -13.4  -4.85599   CTGATTTTATAAAAA           GCCGACCGGC GAT GCCAGTCAGC           TTTCTCACATTAATC 100 35
HC662_RS15905 NONE
HC662_RS15900 3135445 .. 3135472 -  -6.3   -4.9725   ATCGGCATACAAAAA        GAGGAAGGG CCGATGATTT CCCCTCCTC         TTACATATAAAGTGC  83 66
HC662_RS15885 NONE
HC662_RS15880 3133138 .. 3133161 -  -9.6  -5.73672   AAATAAGCAAAAAAA          GCCCTTACCA TAAA TGGTAAGGGG           CCACCTCCTTAACGT 100 40
HC662_RS15875 3131815 .. 3131835 -  -5.4    -5.626   GACGTCATAAAAAAA            CAGCCG CTCAATCTT CGGCTG            CTTTTTATAAAAAGT  86 30
HC662_RS15870 3130031 .. 3130049 -  -8.8  -5.98675   GATAAAAACAAAAAA             CTCCAGTC TTT GGCTGGAG             TTTAGCGCCATAGAT 100 27
HC662_RS15865 NONE
HC662_RS15860 NONE
HC662_RS15855 3128202 .. 3128230 -  -9.6  -3.04517   ATCGTCCGCTAAAAG        CCCCATCGCC TATTTCCGG GACGATGGGG        TTTCAAATGCTTTTC  73 6
        mcpB 3125278 .. 3125297 -   -10  -5.60993   TTCCTCATAAAAAAA            CAGCGCCT TGAT AAGCGCTG             TTTTTTTATGCTTTT 100 39
        tlpA NONE
        mcpA 3120999 .. 3121022 - -12.5  -6.11019   AAAAACTAAAAAAAA          CACCCAAGC GTACAG GCTTGGGTG           TTTGGGCTCATTATT 100 36
        tlpB 3118899 .. 3118923 - -10.8   -5.7946   GTTTCAATAAAAAAA          GAAAGCGGCA GGATA TGCCACTTTC          TCTTTCCATTACGAT 100 34
HC662_RS15825 NONE
        rhaR NONE
        rhaB NONE
        rhaM NONE
        rhaA 3112762 .. 3112789 -  -9.9  -5.47399   TCAAGCCTAAAAAAA       TCCGCCCGCGTGC TAAT GC-CGC-GGCGGA        TTTTTTATTAGACAA 100 33
HC662_RS15795 3110423 .. 3110435 -  -2.7  -4.64383   AACTATAAACGAAAA                TCACA CTT TATGA                CCCGACGTATTTTCT  62 13
HC662_RS15790 3109470 .. 3109490 - -10.5  -5.50925   AATGAACAGAAAAAA            TAAGGCTCC AAA AGAGCCTTA            TTTTTCGGTTTACAT 100 35
HC662_RS15785 3109293 .. 3109310 -  -8.5  -6.20267   TTAAAAACAAAAAAA             CCCTTAT AGAA ATAAGGG              TTTACAGGTATGGAG 100 34
HC662_RS15775 3106622 .. 3106642 -  -4.8  -5.64421   ATTGCAAACAAAAAA           CCTTTTACC TCAA GG-AAAAGG            TTTTGATCATGTATC  85 32
        lytG 3105580 .. 3105613 -  -5.3  -2.68169   TCAATAAGTGATAAC     TTCCGTGGAATATTA TACC TCAAATTCCCCGGAA      TGGAACAAAGAATTA  51 61
HC662_RS15765 3105251 .. 3105271 -  -9.7  -5.58179   GATGATAACAAAAAA            TCCGGCG ATTTAGG CGCCGGA            TTTTTTTATGATTCG 100 31
        betB NONE
        gbsB 3098641 .. 3098663 - -10.6  -5.82316   ATTATCCAAAAAAAA           TCCCGCTC TGTAAAT GAGCGGGA           CATCGATTATACTGT 100 32
HC662_RS15730 3097978 .. 3098023 - -18.7  -4.28115   ATTAAAGAAATTAAA GAAAAGGTAGAAAGGGTCTGAT TTG ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTCCGCT 100 6
HC662_RS15720 NONE
        floT NONE
HC662_RS15710 3094692 .. 3094714 - -16.3  -3.36671   AGCTTAACGTGACAA           CCCCCAGCG CAATC CGCTGGGGG           TTGTTTTTTGTTATC 100 36
HC662_RS15700 3091794 .. 3091819 - -11.3  -2.72371   GTTTTCAAAGAACAC         GTTTCGAAGGA ATGA TCCTTCAAAAC          TAAACAAGACAGGGA  78 87
HC662_RS15695 3088658 .. 3088676 -    -6  -4.49556   TCGCCACCAAACAAA             TGCCTTCA GGA TGAAGGTA             CTGGGCGTTTCTCAC  72 132
         rrf 3088520 .. 3088535 -  -7.6  -3.31322   GCTAATCCTCCATAA              TTGCAC TAGC GTGCAA               TTGCTTGGCGGCGTC  67 28
HC662_RS15685 NONE
HC662_RS15680 3088312 .. 3088324 -  -3.5  -3.09648   CAAGAGACTTGAACA                TTATA TCA TATAA                AAGTGGTGCCGGCAA  46 29
HC662_RS15675 NONE
HC662_RS15670 3088103 .. 3088131 -  -4.5  -3.09516   TGTTCTACCACTGAA        CTACTTCCGCA GAAATGG TGCGGATGAAG        GGACTTGAACCCCCA  50 12
HC662_RS15665 NONE
HC662_RS15660 3087938 .. 3087948 -  -2.4  -3.36823   GGGCGCAAAACTTAA                 TGCC GAG GGCC                 GGACTTGAACCGGCA  45 15
HC662_RS15655 NONE
HC662_RS15650 NONE
HC662_RS15645 NONE
HC662_RS15640 NONE
HC662_RS15635 NONE
HC662_RS15630 NONE
HC662_RS15625 NONE
HC662_RS15620 NONE
HC662_RS15615 3087065 .. 3087078 -  -2.5  -3.67402   ACAACCGCCAAAATA               TATAT ATTG ATATA                TGGTGGCTCGGGACG  49 26
HC662_RS15610 3086965 .. 3086988 -  -2.4  -2.98493   TTTACCACTAAACTA          CACCCGCAATT TTT ATTTG-GGGCG          ATTGATGGGAATCGA  42 19
HC662_RS15605 NONE
HC662_RS15600 NONE
HC662_RS15595 NONE
HC662_RS15590 NONE
HC662_RS15585 3086496 .. 3086514 -  -8.9  -6.23317   ATAAAAATAAAAAAA             CCTTGCA GGATA TGCAAGG             TTTTTGGATGACCCG 100 31
        glgB NONE
HC662_RS15575 NONE
        glgD NONE
        glgA NONE
HC662_RS15560 3078359 .. 3078375 -  -9.4   -5.7946   CTGTGAACAAAAAAA              GCCGCT TATAC AGCGGC              TTTTTCACATCATCG 100 30
HC662_RS15545 NONE
        menD NONE
        menH NONE
        menB 3071893 .. 3071919 -  -8.1  -5.10933   GTATTGAAAAGAAAA        CAGCTTG-GACC GCAA AGTCTCAAGCTG         TTTGTTTACTAAGTA  91 48
HC662_RS15525 NONE
        menC 3069174 .. 3069193 - -10.7  -5.71712   TTTCACACAAAAAAA            CCGGCTG GGTTAG CAGCCGG             TCCAAACGAGAAGGG 100 111
        mntA NONE
        mntB NONE
HC662_RS15505 NONE
        mntD 3065103 .. 3065129 - -13.8  -4.41494   GATTTGTAATCAAAA         GAAAGAGCTGCC TCA GCCAGCTCTTTC         TTTTCGCATGTTTAA 100 11
HC662_RS15480 3061996 .. 3062015 -  -6.4  -5.87996   TAAGCAAGAAAAAAA            GACAAACC CTCA GGTCTGCC             TCATTTCCCCATATT 100 26
HC662_RS15475 3061042 .. 3061052 -  -2.6  -3.78934   CCTTTCCGATAAGAA                 TTAT CGA ATAA                 CTTTTCAATCTGCGT  51 306
HC662_RS15465 3060471 .. 3060498 - -12.9  -5.26918   AGACGTCACAAAAAA        GACCTTTTTGC TTAAGT GCAAAAAGGTC         CCTTTCTGTTTAGCC 100 35
HC662_RS15460 NONE
HC662_RS15450 3059200 .. 3059238 - -19.1  -4.52589   TTTTTGGATACAAAA   GAAAAGCCGGACGTCTT TTAAT AAGACATCCGGCCTTTC   TTTTTTGGATTTATC 100 36
HC662_RS15445 3058550 .. 3058561 -  -2.2  -3.68256   CTTTTATCAAAAAAT                TAGG GAAA CCCA                 GCACGCCATCAGAGT  48 142
        ytkD 3057968 .. 3057985 - -12.7  -5.74122   CAGGACATAAAAAAA             CCCGGCA CATG TGCCGGG              TTTTTCATTCGATCC 100 30
HC662_RS15420 NONE
HC662_RS15415 3054129 .. 3054152 - -15.4  -4.61873   GTTTAGAAAGCAAAA          GCCAAGAGCA ATTA TGCTCTTGGC           TTGTTTTAATTGACA 100 31
        metK 3050800 .. 3050820 - -11.2  -4.05875   CGTAAAAAAGGGAAA            GCCGCTTA ACCAG TAAGCGGC            TATAAAATTATTCTC  86 33
        asnB 3048747 .. 3048778 - -14.6  -3.35964   GGAGAAATAAAAGTA      TACAAGGCTTTCGA CGAA TCGAAAGCCTTGTC       TGTTACACAAAGATG 100 28
HC662_RS15395 3047234 .. 3047262 - -12.6  -2.96216   TTCTATGAGTACATA        CAAAAAGAGCCC GCTGG GAGCTCTTTTTG        TCAGCTGATATTGCG  91 26
        ytpA NONE
        tbcS 3044530 .. 3044554 - -11.6  -5.81412   GCCATCGAAAAAAAA          GCTCAAATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAGTT 100 8
HC662_RS15365 3042537 .. 3042559 - -13.5  -5.60993   TTTTTTACAAAAAAA           CGGACCCTT ATCAA AAGGGTCCG           TTTCTTATACATCAA 100 30
HC662_RS15360 NONE
HC662_RS15355 NONE
HC662_RS15350 NONE
        ytrC NONE
HC662_RS15340 NONE
HC662_RS15335 NONE
        ytrF 3036954 .. 3036972 -   -16  -4.12532   TGCGCTATAGAGAAA             GCCGGCTG TCT CAGCCGGC             TCGTACGCATTATAA 100 35
        bceR NONE
HC662_RS15320 3035177 .. 3035200 -  -9.6  -5.55001   GAACAAAAAAGAAAA          GCATGTGACA TTTT CGTCACACGC           TTATGACACGTTCAA 100 18
        bceA NONE
HC662_RS15310 3032371 .. 3032389 - -13.2   -5.4182   AACGATAAACAAAAA             GCTCCAGA AAC TCTGGAGC             TTTTGCTGTTTTACA 100 36
HC662_RS15300 3030207 .. 3030229 - -10.6  -4.68593   CCGATCATGTAAAAA           GATCCCGC TCATCCG GCGGGATC           TTTTATTATGAAGAG  89 31
HC662_RS15290 3028349 .. 3028377 - -10.3  -6.02546   CCAAACTAAAAAAAA        CTCCCTCATCCCT AAA AGGGACGAGAGAC        TTTCGTTTTCCCGCG 100 328
        leuS 3025807 .. 3025825 - -11.8  -5.86965   ACTGATGAAAAAAAA             TCCCCTTT GGC AAAGGGGA             TTTTTTCTAGGCTTA 100 38
HC662_RS15280 3025393 .. 3025414 - -10.2   -5.7827   AATACAAATAAAAAA           CTAGGGGA CCGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 22
HC662_RS15250 NONE
HC662_RS15245 3018288 .. 3018310 - -11.4  -4.84363   TGAAACGAGCAAAAA           GACCGCTTTA CAG TAAAACGGTC           CTGACCCTTAGATGT 100 33
        bioW NONE
        bioA NONE
        bioF NONE
        bioD NONE
        bioB 3013102 .. 3013134 - -11.5  -4.56597   CTTTCTGTTCAAAAA      TAAAAGCAATCGACA TCA CACCGATTGCTTTTA      GTGATTCTCTCAGCT 100 35
HC662_RS15215 3011838 .. 3011850 -  -9.1  -2.68823   CCTTTTTTATAGAAT                GCCCA TTT TGGGC                GGGGCTGACACTTTT  67 63
HC662_RS15210 3011028 .. 3011056 -    -9  -5.56263   ATGACAAAAGAAAAA        GAGCATAATCTT AGAAA ATGATTATGCTC        CGTTCTCTTCCTCAT 100 18
HC662_RS15205 NONE
HC662_RS15200 3008426 .. 3008450 -  -9.4  -5.12617   GAAGCATGTAAAAAA         CCCAAAACCGC TCGC GCG-TTTTGGG          TTTTTCCAAGTTATT  91 36
HC662_RS15190 NONE
        rmgQ NONE
HC662_RS15180 NONE
HC662_RS15175 3001963 .. 3001981 -    -3  -3.05463   ACCCGCCCCATTGAA             CCATCATG CTC CACGGCGG             CCCCTCCTTTTCTGC  44 42
HC662_RS15170 3001298 .. 3001314 -  -3.7  -2.94416   CAGCGTTATGATAGA              GAAATGA TGA TCACCTC              GTCTCCGGATACAAA  47 19
HC662_RS15165 3001029 .. 3001054 - -16.3   -5.5112   CTTATTAACAAAAAA         GATCTTTCCGC GCCC GCGGAAAGATC          TTTTTATTTGCGATA 100 29
        murJ 2996150 .. 2996166 - -10.1  -4.77173   CCTTTATAAAAGAAA              GCCCGCA GCA TGCGAGC              CCTCTATTTCTTCAT  91 51
HC662_RS15145 2995378 .. 2995398 - -12.6  -4.99043   TGCTTATAAATAAAA            CCCCGCAT TCGGT ATGCGGGG            TTTTTTCATGCTTGC 100 31
HC662_RS15135 2994053 .. 2994078 -  -5.4  -4.13561   GCCTTCGAAAAAAGA         GCGATCGGCC GTTCAT AACCGATCAC          CTTGGACTGCCTGAT  65 12
HC662_RS15130 2992886 .. 2992906 - -11.2  -4.67354   AACACATACAGAAAA            CCCAAACG CCAGC CGTTTGGG            TTTTTTATGTAAACC  90 30
        pepV 2990058 .. 2990083 - -13.3  -5.40474   ATTTGTTTAAAAAAA         GGACTGGCTTC AGAA GAAGCCGGTCC          TTTTATTTTGCAAGT 100 28
        thpR 2988423 .. 2988435 -  -3.5  -3.29727   CGCAATGAATTAAGA                TAAAT GAA ATTTA                AATATTTCCTCGTAC  48 7
HC662_RS15105 NONE
HC662_RS15100 NONE
        pulA 2984245 .. 2984284 -  -2.3  -5.83211   TATGAAAATAAAAAA  GACAGCTATTGA-GAG TCTCATATG CTAATCAATAGCCGTC  CTTTAAATTTTAGCG  84 58
HC662_RS15090 2982965 .. 2982989 -    -5  -5.74122   GAGCATATAAAAAAA         GAG-GTTCCTG TCTG CCGGAACACTC          CTTTCACATGTATAA  93 376
        trmB 2982193 .. 2982212 - -10.8  -5.93809   GGCCCATAAAAAAAA            CAGACTCT TGTA AGAGTCTG             TTTTACGTTCTCCAT 100 28
HC662_RS15075 2981289 .. 2981300 -    -3  -3.61356   ATCATGCAGGGTAAA                CATA AAAA TATG                 CTATTGCTTGATTCG  49 26
HC662_RS15070 2979489 .. 2979508 -   -15  -5.10163   AAGCGTAAAATAAAA            GCCGCTGC CCAT GCAGCGGC             TCTTTTTTATTATAT 100 35
HC662_RS15060 2977867 .. 2977903 -  -8.1  -5.68489   CAGAATAAGAAAAAA   GCTTGTCGATCCGAGG TAACTG CCTCGT-TCAACAAGC    TTTTATGTAATCCTA 100 38
HC662_RS15050 NONE
HC662_RS15045 NONE
HC662_RS15040 2976018 .. 2976032 -  -2.2  -2.59323   AAAAGCGTTCATAAG               TAAAAA TCC TTTCTA               ATCCTTTTTCGGACG  40 23
HC662_RS15035 2975345 .. 2975368 - -13.2  -4.91852   TTCAGCAAAAACAAA          GCCGCTAAAC AAGG GCTTAGCGGC           TTTTCACATGATTCG 100 66
HC662_RS15030 2972226 .. 2972239 -  -9.5  -4.07568   CGCGGCGGCTGAAAA               GCCGC CCTA GCGGC                GTATTTTATATGTTT  82 183
HC662_RS15025 2970821 .. 2970848 - -14.4  -4.08706   TTTCCATCAGATAAA        TAAAAAGCAGTG AGAT CACTGCTTTTTA         TTATGCCATGACGTT 100 26
HC662_RS15020 NONE
HC662_RS15015 NONE
        ytxJ 2969400 .. 2969421 -  -9.5  -6.06723   TTTTTCAAAAAAAAA           GCG-CCAGAT CAT ATCTGGACGC           TTTTTTCTATGACAA 100 32
HC662_RS15005 2968085 .. 2968100 - -11.8  -5.75599   GAAAGCATAAAAAAA              GGCCGC AGAC GCGGCC               TTTTGTATTGTTCAA 100 41
        ccpA 2966793 .. 2966822 -  -8.7  -5.14563   CTCCCCATGAAAAAA       GCAAGAATTCACCT TAG AGGTGAAG-CTTGC       TCTCTTGTTTTTCTT  91 39
        motP NONE
        motB 2965236 .. 2965255 -    -5  -5.77856   AACAAAGTAAAAAAA            CGACCT TCACGAAG AGGTCG             TTTTAGATTTTTTGA  93 12
        acsA 2960578 .. 2960603 - -15.5  -5.83211   GATTAAAATAAAAAA         CGCCCCTTCGT TTAC ACGAAGGGACG          ATTGATTATCGCGGT 100 308
HC662_RS14965 2959242 .. 2959267 - -16.3  -6.02919   CGATAAACAAAAAAA         GATCCTTTGCC GTTA GGCAAAGGATC          TTTTTTCTTATTTGT 100 33
HC662_RS14955 NONE
HC662_RS14950 2956329 .. 2956353 - -10.1   -4.7219   CACAGTAACATAAAA          GCCCAAAAC TGATATT GTTTTGGGC          TTTTTTATTTTATTG  91 30
        refZ 2954831 .. 2954846 -  -4.7  -3.29973   CCAAAAATTCATCAA              GCTGT TTCCGT ACAGC               ATGTCTGAACATATT  54 259
        ezrA 2952347 .. 2952372 -    -9  -4.78149   TTTATAATGGAAAAA         GAGCCCGC TTATTACAGT GCGGGCTC          TTTTTCATATCGTGA  88 45
HC662_RS14920 NONE
        thiI 2948348 .. 2948361 -  -5.3  -3.54475   CTTGTGAGTATAGAA               TGTGT TAAA ACACA                TGGCTTCATTCAAAA  57 76
HC662_RS14910 2948066 .. 2948085 - -13.6  -5.15526   ATATAAAATGAAAAA            GAGTGGGG ATAA CCCCACTC             CTAAGCCATTATGTG 100 51
HC662_RS14905 NONE
HC662_RS14900 2944710 .. 2944729 - -13.6   -4.6038   TATAGGAAATGAAAA            GGACAGGC AGCT GCCTGTCC             TTTTATTATTTCCCA 100 31
        sppA NONE
HC662_RS14885 2942167 .. 2942191 - -17.3  -5.66684   CAATTCAGAAAAAAA          TAAACCCGGAC GAG GTCCGGGTTTA          TCAGTTATTTGCGGT 100 30
HC662_RS14880 2941412 .. 2941436 - -13.7  -5.93252   CCCAAAAATAAAAAA          CATCTCCTGAT CAA ACCAGGAGATG          TTTTCACCGTTTAAA 100 36
        snaA 2939754 .. 2939769 -    -4  -2.63596   GGCTACCTCACATTA              TGC-CCA GCT TGGCGCA              CCTAAAAGCGCCGGG  45 7
        tcyJ 2938689 .. 2938710 -  -2.2  -3.02144   TCAGTTTCTTCAATA           TAAGCTGC AACAAA GCGGCTCA            ACTTATCAGCAAGAC  42 243
HC662_RS14855 2937348 .. 2937360 -    -2  -2.64225   GCAAAAACGATTAAT                TTCT TCATC AGAA                CACCCCATCTATATC  40 61
HC662_RS14850 2936362 .. 2936378 -    -8  -6.09196   TGGAAAATAAAAAAA              GAAGCC TGCCC GGCTTC              TTACAGCGTTGGTTT 100 100
HC662_RS14845 2934718 .. 2934731 -  -3.9  -3.52204   GTACGGTCAAAGCAA               TCTTT GGAA AAAGA                AATCTGTTCAGCAAA  51 252
HC662_RS14835 2933552 .. 2933565 -  -8.1   -3.1917   ATGAACACTAAGAGA               GAGGG TCTC CCCTC                TACTTGTGTTCTTTA  68 25
        dnaE NONE
        maeB 2927506 .. 2927533 - -12.7  -3.36671   AGTTTAACTTGAGAA        CAGCGCGCCGG TCTCCG CCAACGCGCTG         CCATTTTTGGAATGA  95 48
        accD NONE
        accA 2925359 .. 2925386 - -12.2  -5.27923   GAATGTCACAAAAAA        TAAACGTG-AGCC AAA GGCTTCACGTTTA        TTTAGTTTACCCCGA 100 27
        pfkA NONE
         pyk 2922413 .. 2922430 - -11.3  -4.88684   AACATAAAGAGAAAA             GGAAGGG AAGC CCCTTCC              GTTTTCACCTCTGAT  93 40
        fxsA 2921950 .. 2921971 -  -9.5  -5.65496   CAGCAAAAATAAAAA           GCAGCCCATG TTG CATGG-CTGC           CGTTTTTTATTTGAT 100 32
HC662_RS14775 2920248 .. 2920262 - -11.4  -6.02914   TGCATACAAAAAAAA               GCGGCT TAA AGCCGC               TTTTTTTTCATGAAG 100 33
        citZ 2918777 .. 2918788 -  -5.8  -3.62046   TGATGTTCTGAACAA                GAGG CTAA CCTC                 ATTAACGCAAGCCAG  62 55
         icd NONE
         mdh 2916362 .. 2916391 -  -8.7  -4.81551   CATTTATAGTAAAAA       GAGAAAGGCTC TATCAAGC AAGCCTTTCTC        TCTTTTTATTAAGAT  88 34
        phoP NONE
        phoR 2913613 .. 2913638 -  -6.9  -5.48787   AGAAGACACAAAAAA         GGACGGGAAC ACAAATG GTTCCCG-CC         GTCAAAATTGGCTCC  91 119
        polA NONE
        mutM NONE
        ytaF NONE
HC662_RS14730 2908557 .. 2908577 - -14.1  -5.26875   TTTTTAATGAAAAAA            CACCGTTCA TAT TGAACGGTG            TTTTTGTATTATGAC 100 34
HC662_RS14715 2905892 .. 2905916 - -14.3  -4.99435   CGTAAGAACCAAAAA          GCAGCCAGCGC TCC GCACTGACTGC          TCTTTTTATGATTCC 100 31
HC662_RS14710 NONE
HC662_RS14705 2904014 .. 2904059 - -11.3  -5.35224   TTTATAAAAATAAAA GGAGCATAAGCTAAAAAG-CGC ATA ACGGCTTTCTAGCTTCAGCTCC CTTTGTGGTCGTGTT 100 45
        nrdR 2903321 .. 2903344 -  -6.8  -4.50976   TTGCACATGAGAAAA          GAGCTA-GAAG AAT CCTCTTAGCTC          TTTTAACGCTCTTTC  75 28
        dnaB NONE
        dnaI NONE
HC662_RS14685 NONE
        ytxC 2898881 .. 2898906 - -11.1  -4.96848   TTTTGCATATAAAAA         CCCCGCCCCCT ATGA AAGGGACGAGG          TTGAATAAACGGAAT  93 368
        thrS 2896880 .. 2896909 - -15.2  -5.76237   TAGAGAAATAAAAAA       GAGCATGATCTC TTCAAT GAGATCATGCTC        TTTTTTATGTTATTT 100 35
        lytS NONE
        lytT 2893429 .. 2893443 -  -2.1  -2.87035   AAATGCAAAAAGCCA               CCCAT CAAAT ATGGA               GCAGCTTTTTCAATT  41 15
        lrgA NONE
        lrgB 2892115 .. 2892148 - -14.7  -3.84585   ACGCACCATAAAATA     GAAAAAGCCAAGGCT TGAT AGCCTTGGCTTATCC      TCCGATCAGCTGCAT 100 20
        infC NONE
        rpmI NONE
        rplT 2890497 .. 2890517 - -12.6  -5.36441   CCTTTATATAAAAAA            GCCGCTCT GCTGG AGAGCGGC            CTTATATGATTACTT 100 35
HC662_RS14630 2890171 .. 2890198 - -10.6   -5.4477   AAACTCGCAAAAAAA        GCAGAAGAGCGC TAAA ACGCTTTTCTGC         TTTTTATAAATCAAG 100 29
HC662_RS14620 2888488 .. 2888515 -  -6.2  -5.76633   GTACAGACAAAAAAA        TAGAACCCGCCC TAAA AGGCGGATTCCT         CCGTATCTTTATTGA 100 34
        abnA 2887329 .. 2887346 -  -9.8  -5.00616   TTTTCTTTTAAAAAA             GCCGGG CGCAGC CCCGGC              TTTTTCATTCAATAG  93 34
        araA NONE
        araB NONE
        araD NONE
HC662_RS14595 NONE
HC662_RS14590 2881316 .. 2881329 -  -3.1  -2.91264   CGGGCTATTCATATA               GACCA TGAT TGATC                AGTGTTTTGTTTTCA  45 1
HC662_RS14585 NONE
HC662_RS14580 NONE
        araQ NONE
HC662_RS14570 2876602 .. 2876617 - -10.4  -5.89659   AGAAAAAAAGAAAAA              CCGGAG AGAG CTCCGG               TTTTGTTTCTCTTAT 100 37
HC662_RS14565 NONE
HC662_RS14560 NONE
HC662_RS14555 2874683 .. 2874703 -  -5.3  -4.96848   TTTCCTATACAAAAA            TGCCGGC TGGAATG GCCGGCT            TGAGACAGTTAGTTT  76 34
HC662_RS14550 NONE
HC662_RS14545 2872359 .. 2872383 -   -13  -4.40181   AAACATCATAAGAAA          GCCCAAAACA GAAAT TGTTTTGGGC          TTGTTCGTTATTCCA 100 33
HC662_RS14520 2866955 .. 2866978 - -13.2  -6.09196   TGGAAAACAAAAAAA          CCCGTCCCTT GTAC AAGGGACGAG           TTGTGGCCGCGGTAC 100 299
        pheS NONE
HC662_RS14505 2863406 .. 2863427 - -13.1  -5.36441   CGTTCATAGAAAAAA           GCTTGCAGA TAAA TCTGCAAGC            TTTTTTATTAGCCTC 100 33
        zapA NONE
HC662_RS14490 2861504 .. 2861522 -  -5.3  -5.45726   CATACTTGAAAAAAA             CTTCTCC GGACA AGAGAAG             TTTTTTATGCCCCGT  83 30
        polX NONE
HC662_RS14480 NONE
HC662_RS14475 2856821 .. 2856848 - -10.1  -5.44119   TGGACGGCAAAAAAA        GAAAAAGAAAG GTAAAT CTTTCTTTTTC         TCATGATACGAACAG 100 122
        lcfA 2854990 .. 2855007 -  -7.1  -4.03234   TCCTTCCTATAGAAA             TGAATGA CTAT TCATTCA              TAATTTCATGATAAA  72 93
        fadR NONE
HC662_RS14460 NONE
        etfB NONE
        etfA 2851759 .. 2851781 - -11.3  -4.87318   TTGAAAATGTAAAAA           CCCCGAACT TCAGC AGTCCGGGG           TTTTCTTTACGAGTG  93 32
HC662_RS14445 2850052 .. 2850078 - -12.3  -4.98616   TTAAAACATGAAAAA         GAGCGCCGG CATGAAGCT CCGGCGCTC         TCGCTCGATTAAGAA 100 34
        trxA 2849400 .. 2849421 -    -8   -5.7946   TGGCGAATAAAAAAA           GCGATCCC TCAATC GGAATCGC            TCTGGCATGTAAGCA 100 49
        uvrC 2847236 .. 2847261 -   -12  -5.88565   TCCACAATAAAAAAA         GCAATGAGAG GTATTG CTCTCATTGC          TTATCAATTAATCAT 100 301
HC662_RS14430 2845900 .. 2845922 -  -9.9  -5.27477   AGTGTAATCAAAAAA          GGCGGTGACT GCAT AGTC-CCGCC           TTTTTTGATTGTCAT 100 40
        sdhC 2844555 .. 2844565 -  -3.2  -3.02202   TACTCTTATACAAAT                 GCAA AAA TCGC                 TTTTAAGCCTACGTA  45 5
        sdhA NONE
        sdhB 2841957 .. 2841976 -   -10  -5.42259   TTATTGTTAAAAAAA            CCTCTCCC ATGC GGAAGAGG             TTTTTTCTTCTTATA 100 36
HC662_RS14405 NONE
        gerE 2841107 .. 2841137 -  -4.1  -3.88641   AACAAACAGCAATAA      CCGGC-T-CCTTCCT GAA AAGAAGGAATACCGG      CAAGGATTAAAGCTC  57 32
HC662_RS14395 NONE
        racE 2839601 .. 2839621 -  -9.7  -5.63645   GCAAAACAGAAAAAA            CCCGCAACA TAC CGTTGCGGA            GGAAAACTATCTTCT 100 32
        gerM 2838357 .. 2838387 -    -7   -4.2528   CCGGAATTGAATAAA      GAAAGAGG-CAGC CGGAAC GCTAACCTCTTTC       TTTCTAGTATATCAA  76 51
HC662_RS14380 NONE
HC662_RS14375 2836489 .. 2836500 -  -5.8  -4.56597   GCTTGGTCGTAAAAA                CGCA CGGT TGCG                 GCATCATTTTCTAAT  74 481
HC662_RS14365 2836189 .. 2836212 -   -14  -5.56673   ACCGACAACAAAAAA          CCTCAAATCC TTAA GGATTTGAGG           TTTTTCTTTTAGTAC 100 39
        ilvB NONE
        ilvN NONE
        ilvC NONE
HC662_RS14330 NONE
        leuB 2827410 .. 2827429 -  -6.4  -3.40867   CTACCTATGAACTAA            GACCGCTT AACA AAGCTGTC             ACACATTAGAAATTG  63 24
        leuC NONE
        leuD 2825321 .. 2825343 -  -9.8  -5.48825   CATCAGGCAAAAAAA           GCCGCCGG ACAAATA CCGGCAGC           TTTTTCAGGCTTTAA 100 30
HC662_RS14310 2824179 .. 2824189 -  -2.6  -3.01847   ACACAAATACAACCA                 TTAT ATT ATAA                 CATAACACATAGCGC  43 61
HC662_RS14305 2822669 .. 2822693 - -12.9  -4.43859   CATAATTGTACAAAA          CAAGGCACGAA TCA TTCGCGCCCTG          TTTTATTATTACTAT 100 55
        clpX 2821150 .. 2821175 - -14.1  -5.67063   TGCAGGACAAAAAAA         CCTCCTGAATG TCAC CACTCAGGAGG          TTCGTGCTTATCTTT 100 39
        lonB 2819357 .. 2819376 -  -9.4  -5.52384   CCTTCATGAAAAAAA            CCCTATTT TAAA AAATAGGG             TTAAACAGATTCTTT 100 26
HC662_RS14285 2816069 .. 2816092 - -13.2  -5.03227   ATACGATAAATAAAA          CCGGCAGAGA GTAT TCTCTACCGG           TTCAGCGTGTTGACA 100 222
HC662_RS14275 NONE
        ccsA NONE
        hemC NONE
HC662_RS14260 NONE
        hemB NONE
        hemL 2809042 .. 2809068 - -11.7  -5.40625   AGAGCACAGAAAAAA        CCGGTA-CAAGG ATGT CCTTGATACCGG         TTTTTAACTCTTATC 100 36
HC662_RS14245 NONE
        ysxE 2805736 .. 2805764 -  -8.8  -4.63044   ATGGATATAAACAAA        CAAGTCCGCGCC ATTAA GACGTGGACTCG        TTTTCAGCCTGAAAT  86 10
        valS 2802416 .. 2802437 - -14.5   -3.7511   TCTTTTATAAGACAA           GGCGGTTTC TATA GAAACCGCC            CCGGCTTTTCATTAG 100 37
HC662_RS14225 2801056 .. 2801087 - -14.5  -3.61674   TTTACACATAAAAAC      CCCGGCAGAATCT CATTTT AGATACTGCCGGG       TGCATGCCTTTATTG 100 35
HC662_RS14220 2800157 .. 2800181 -  -6.5  -6.09133   CAGGCGAAAAAAAAA          GAACAAGAC TTTTGTC GTCTTGTCC          AAAAAACGTTCGTCA 100 54
HC662_RS14215 NONE
         maf NONE
        radC 2797566 .. 2797579 -  -2.3  -4.98531   TTCTTAAAGCAAAAA               TACCC TAAA GGGAA                AAACTCATAAACTCT  66 72
        mreB NONE
        mreC 2795602 .. 2795633 -  -2.2   -4.0251   AGCATCATAACGAAA      GGGAGAAGGAAACGC TTC ACGA-TCCTTCCTCC      TCTGTATCGACAGTC  52 10
        mreD 2795092 .. 2795105 -  -2.5  -4.34482   TTCGTCAAAAAAAGA               TAAAA TCCT TTTTA                CTCATCTCTCAATTC  58 23
        minC NONE
        minD 2793513 .. 2793538 -  -8.3  -6.23317   ACAAAAACAAAAAAA         CCTGACACAGC ATTT GCTTTGTCAGA          TTCTTCTCTTTGATT 100 49
     spoIVFA NONE
     spoIVFB NONE
        rplU NONE
HC662_RS14160 NONE
        rpmA 2790641 .. 2790662 -  -8.7  -5.79526   ATATTGCAAAAAAAA           CTCCAGTCA TCAT CGACCGGAG            TTTTTTGAATCATTA 100 38
       spo0B NONE
        obgE 2788420 .. 2788442 - -14.2  -3.63744   CCCCCCTTTAAAATA           GAGAGCCTGA CAT CCAGGCTCTC           CTCTCAGCCATCATT 100 39
        thrR NONE
        pheA 2787057 .. 2787086 - -12.4  -2.72434   ATTTTAATTAAAGAC       TAAAAAAAGCCC TTTATT GGGCTTTTTTTA        TAATTGGTAGGACTG  85 23
        nadB NONE
        nadC NONE
        nadA NONE
        safA 2780435 .. 2780454 - -10.8  -5.96894   AGTGAAACAAAAAAA            GGAACGAT TTAC ATCGTTCC             GAACAATCACTCATC 100 32
HC662_RS14095 2779688 .. 2779714 -   -13  -5.30616   TGATGTAAAGAAAAA         GGCTGCCGAATA TCA TTTCCGGCAGCC         TTTCCGTCCTAGCGG 100 34
HC662_RS14090 2778868 .. 2778892 - -12.1  -5.10064   TTGAATATACAAAAA          CCGGCCCGATA TGA CATCGTGCCGG          TTTTTTATAAGCGGT 100 30
HC662_RS14075 2776436 .. 2776457 - -17.3  -4.19238   TTCTTAATTCGAAAA           GGCAGCCGC TCAA GCGGCTGCC            TTTGTCCATTTATAT 100 41
        iolG NONE
HC662_RS14060 2773138 .. 2773152 -  -2.1  -3.45324   TAGTTTGACCAAAGA               GGCTA CTGCT TAACC               GTTTTCTCGAAATTT  46 13
        bofC 2772549 .. 2772564 -  -7.6  -5.52384   CTTCCACGAAAAAAA              GACATG AATA CATGTC               TTCAATCAGCGGACG 100 41
        ruvA 2771814 .. 2771833 -  -2.8  -2.63596   CTTCACTTGAGACGA            GCCGTTCA TCCA TGAACATC             ACCTTACTTCAATAG  41 29
        ruvB NONE
HC662_RS14040 NONE
        queA NONE
         tgt NONE
        yajC 2768038 .. 2768059 -  -9.4  -5.36441   CTTCCACATAAAAAA           GAGCGGGC TCACTC ACCCGCTC            TTTTTTTGTTTGCTA 100 57
HC662_RS14015 2766788 .. 2766804 -  -3.6  -3.53444   TGATCGTCCGGTAAA              GGTCAC GTGCG GTGCCC              ATCTTTTTCATCAAT  51 11
        comN 2764815 .. 2764829 -  -6.4  -2.60075   CCTGTGCGAATCAAC               CTGCTA TCT CAGCAG               TTCTTCCAATGCTTC  56 14
       secDF 2762534 .. 2762561 -   -12  -5.12707   TGAAACTTCAAAAAA        GCAGGCTGCCCT GCAA AGGACAGCCTGT         TTTTTTATTGTGCCG 100 30
HC662_RS13995 2761900 .. 2761920 - -11.2  -2.60615   ACTGGTTTTAAACAT            GGCTTGAC GCTAG GTCAAGCC            TCATTTGCAGTTAAT  78 19
HC662_RS13990 2761455 .. 2761493 -  -6.8  -2.76227   GCTAACATAAATTCA  CCCCTCAAC-CACCCTA TTATAC TAGAGCAAGCTGAGGGG   TTTCAAATATTATTC  57 46
        recJ NONE
HC662_RS13980 2758528 .. 2758546 -  -3.8  -5.31545   AACAATAGGAAAAAA             GCACCC TGACATG GAGTGC             TTTTTCCGTTATGCG  76 48
        relA NONE
         dtd 2755722 .. 2755737 - -10.4   -5.7946   TTTCCAATAAAAAAA              GCTGCC TCTT GGCAGC               TTTTTTATTTTGAAT 100 30
        yrzK 2753548 .. 2753585 - -17.9  -5.79588   TGAAAATGAAAAAAA   CCCCCGCCCCTACTATA CATG TATAGTAGGGACGAGAG    TTATACCCGTGGTGC 100 302
HC662_RS13955 NONE
        aspS 2750383 .. 2750404 -  -5.3  -2.99834   AAATCATATCACAGA           CGATT-TTGA TTT TCAAGAATCG           AACTGTTCATTCAGT  53 36
        ssrS 2750122 .. 2750140 -  -8.8   -3.2511   TTTCATCTATAAAAT             GGCTGATC CAT GAGCAGCC             GTTTTTTCTGCGCAC  72 47
        cymR NONE
HC662_RS13925 2746219 .. 2746230 -    -3  -2.78992   ATTCACTCCAATAAC                TAAG CCGC CTTA                 TTGTGTCAGCCGTTT  42 23
        mnmA 2745055 .. 2745073 -  -6.7  -5.14563   CCTTTCATTAAAAAA             CCCCAAC TCAGT GTTGAGG             TTTTTCATCTTTTAT  83 37
HC662_RS13915 NONE
HC662_RS13910 2741935 .. 2741952 -  -9.1  -5.95539   CCGCAAATAAAAAAA             CTCCCGC TATC ACGGGAG              CCTTTTTACAGCTGT 100 31
HC662_RS13905 NONE
HC662_RS13900 NONE
HC662_RS13895 2740990 .. 2741011 - -11.7  -4.74013   GGCAAACATAGAAAA           GGATACTCT TCGG AGAGTATCC            TTTTTCGCATTAAAA 100 35
HC662_RS13870 2736487 .. 2736530 - -11.9  -5.22312   AGTGACAGCAAAAAA GCCCTC-CCCCTATGCAAAC CACAC GTTTACACAGGGACGAGAGC TGTCTCGCGGTACCA 100 264
        alaS 2733808 .. 2733818 -  -3.2  -3.36216   GGCAAATTATAAAAC                 GGAT TTT ACCC                 AATCTTCTACAGAAG  48 6
HC662_RS13860 NONE
        ruvX NONE
HC662_RS13850 2732689 .. 2732710 -   -13  -5.69473   TACAGCAGAAAAAAA           GCCGGAGC AGTATG GCTCCGGC            TTTGGCGCGGTGTTT 100 40
        mltG 2731480 .. 2731508 - -15.5  -3.27525   CTTGCGGAAAGCGAA        CAAAAGGAGAGCA TTT TGCTCTCCTTTTA        TTTCTCATTTTTTGA 100 23
HC662_RS13840 NONE
HC662_RS13835 NONE
HC662_RS13830 NONE
         udk 2727766 .. 2727789 -  -7.5  -3.83324   TTATAAACAGGGAAA          GAAGGGAAT TCGCGC ATCCCCTTC           CTGCCTATACATAAT  72 74
        greA 2727068 .. 2727094 - -15.2  -5.61596   ATCTTCATAAAAAAA         CACCTCACCCAC ATT GTGGACGAGGTG         TTTCTTTGCTAAACG 100 45
HC662_RS13815 NONE
HC662_RS13810 2724506 .. 2724538 - -19.3  -4.19506   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT CTA ATCCGGCTGCTTTTG      TTTATTTTAATTTTT 100 27
HC662_RS13800 NONE
        mtnN 2722729 .. 2722748 - -11.4  -4.18018   TGTTTTTAGGGAAAA            CGGAGGAG AACT CTCCCCCG             TTTTAATGAATTCGT  90 28
HC662_RS13790 NONE
HC662_RS13785 2720547 .. 2720598 -  -2.6  -4.17048   TTTTGTTCAAAAGAA TCACCTGCCAGATTCATAGTATA CGACTAT TATAATAT-AATCTGGCAGCTTA CAGAGAAAGTAATTC  55 51
HC662_RS13780 2720283 .. 2720306 -  -8.2  -5.80727   AAAAATAACAAAAAA          CAGCCATC GCTGAGTT GATGGCTG           TTTTTTATTCGTCGG 100 30
HC662_RS13765 2715947 .. 2715992 -  -9.9  -5.52096   AAAGGCAATAAAAAA GGCAGCACTCAAATAACCTG TGTCAAC CAGGCG-TTTGAATGCTGCC TAACTTGTATGCATA 100 182
HC662_RS13760 2714775 .. 2714815 -  -9.8  -5.27335   GCGGGCAAATAAAAA CCGCAGACAAAAGAAGACA CCAA TGCCT-CTACTGCCTGCGG  GGAGTTGCGTATGTC 100 296
HC662_RS13755 NONE
HC662_RS13750 2714202 .. 2714224 - -13.6  -5.40072   TTTTCCGCAAAAAAA           GCAGAAAACA AAA TGTTTTCTGC           CCTCTTTTAATGCCA 100 32
HC662_RS13745 2713444 .. 2713488 -  -5.2  -4.09805   AAAATAAAAAATTAA GAAAATATACCCAAAACC AAAAATGAG GGCCCTGGATATATTTCC CGAGAAATTTTTTTA  63 38
        fatR NONE
HC662_RS13735 2709472 .. 2709497 - -11.9  -4.23999   TCATATGCAAAATAA         CCCCGCCAT TCTGATTG ATGGCGGGG          TTTGATTTTTTATTA  95 38
HC662_RS13705 2703524 .. 2703567 - -13.6  -3.99275   GGACATAAGATGAAA TAACAAAAAAGACAAGGGA TACTCAC TCCCTTGTCTTTTTTGT-A TGCGCCAAACACTAA 100 76
HC662_RS13690 NONE
        levE NONE
        levF NONE
        levG 2695595 .. 2695606 -    -3  -2.73364   CTGCTATCTGAATGA                TTCA TATA TGAA                 AAGACGGCTGCAGTT  42 68
HC662_RS13670 NONE
HC662_RS13665 2693371 .. 2693395 - -15.8  -3.65135   TTGAAATAATGAGAA          GGCACAGACC GTTTG GGTCTGTGCC          TTTTTTTAAGAGAAA 100 85
HC662_RS13620 NONE
HC662_RS13615 2688150 .. 2688173 -  -5.3  -5.59879   TATAAACATAAAAAA          CCATACCGA TAATAC TTGGTATGG           TTTCTTTAAGTAGGC  86 87
HC662_RS13610 2687141 .. 2687182 -  -8.7  -3.10611   TTTAGGTCAATAAAT GCCCCTAACGGAGAGAAGT AGTC ACCTTACTCCACTAAGGGC  GGAGAAGTGCTACTG  70 257
HC662_RS13605 2686178 .. 2686223 -  -5.8  -4.16279   TATATGATCTTAAAA TAAAAAAGAAAC-TTTGGATT TTGTG AATCCGCAGGTTTCTTTTTTA TTCATCTACTTTTTT  68 31
HC662_RS13590 2683539 .. 2683559 -  -8.4  -5.95539   CTGCAAATAAAAAAA            GATACCAA CATCT TTGGTATC            TTTTAGATTTAGTTC 100 70
HC662_RS13580 2681175 .. 2681198 -  -3.3   -3.8535   TAAGTTAAATAAATA          TTTTTTTAC TGTGTT GCAAAAAAA           ATTCTATGATCATAT  53 40
HC662_RS13575 2679483 .. 2679495 -  -7.7  -5.16237   AATTTCATTAAAAAA                CTGAC TTT GTCAG                TCAGTTTCCTTTACA  89 311
HC662_RS13565 2678461 .. 2678483 - -11.3  -4.96646   CTACAGAAGCAAAAA           GCTGCTGAC GAAGA GCCAGCAGC           TAACACAGGGACATC  93 136
HC662_RS13535 2671297 .. 2671315 - -11.8  -4.20981   TGAACAAATCATAAA             CCCTATAG CAG CTATAGGG             TCAAGGGGTCGTTAT  93 37
HC662_RS13530 2669978 .. 2669988 -  -3.2  -4.29432   TAAACGCTATCAAAA                 GCTA AAG CAGC                 ACGTACAGCTCTAAT  60 374
HC662_RS13525 2669173 .. 2669202 - -14.5  -4.40003   GCTTAGAAATATAAA       CCGCAAAGCTTTCT TGA AGA-AGCTTTGCGG       TCTTAGGGTTTCTTT 100 151
HC662_RS13515 2668413 .. 2668430 -  -5.5  -4.72272   CCTCTGTATTAAAAA             GCACCCC GCAG GAGATGC              TCTTCTCTTTTATTT  74 35
HC662_RS13510 2667889 .. 2667919 - -10.6  -2.55999   TTACCCCATATCAAT       CAGACGCCATAA GAAATCT TTATGACGTCTG       TTTTGTTATGTGTCT  76 130
HC662_RS13485 2664840 .. 2664865 - -10.6  -5.30686   AACACGTACAAAAAA         GCCATACAAT ATAATA ATTGTATGGC          GAACAATATTAGGTA 100 34
HC662_RS13480 2663119 .. 2663129 -  -5.4  -4.93877   GGTTAGGAAAGAAAA                 TGCT TAA AGCA                 CTTATTCAGCACCTT  80 379
HC662_RS13470 2661840 .. 2661876 - -14.1  -5.64421   ACTCTAAAGAAAAAA    CAAAGAAGATACAAA GTATCGT TTTGTATCTTCTTTG    TTAGTTCGAGCCCCT 100 186
HC662_RS13460 2659384 .. 2659408 -  -7.2  -3.06492   CCATCCACTCGAATA         GTCA-CAACCG TACA CGGCTGGTGAC          TGTCCAGTATTGGGC  62 467
HC662_RS13445 2657327 .. 2657342 -  -7.6  -3.48276   GCTTTTCTTATAGAA              CTAACG GGTG CGTTAG               TTTAACAAGAAAGAG  68 56
HC662_RS13435 NONE
HC662_RS13430 2654819 .. 2654832 -  -2.4  -4.58395   CTCACGGGTTAAAAA               TGCA GGAGCT TGCA                GATAGATGAACGCGG  61 221
HC662_RS13410 2652014 .. 2652065 -    -9  -3.67296   TATTAGTTACCTAAA TATAAAACCTGTGTCGTAGATATC TAGT AACATCTTTGATACAGGTTTTATA CTCCTTCTTTAATTA  74 206
HC662_RS13395 2649678 .. 2649706 - -14.8  -3.09492   GTTTGAACCTGAACA        TAAAAGAACCGC GACTG GCGGTTCTTTTA        GTGTATATTCCTATA 100 61
HC662_RS13385 2648395 .. 2648415 - -11.1   -5.7946   TGTGTAATAAAAAAA            GCCACTGGC TTA GCCAGCAGC            TTTGTCTGCGTTATT 100 14
HC662_RS13380 2647517 .. 2647536 -  -7.2  -5.36965   TAATATTATAAAAAA            GGC-CTCTT GAA AAGAGAGCC            TTTTTTATTTCATTA  91 30
HC662_RS13355 2642817 .. 2642834 -  -5.5   -5.5353   TACATCAATAAAAAA             CCCCTCT ATTA AGAGGGT              TTAATCTGATCTGTT  86 157
HC662_RS13345 2640626 .. 2640644 -  -2.4  -2.79175   AATTCTCAGGTAAAG             GCGCTAAT AAC ATTAAAGC             ATTCTATCACGATCA  41 271
HC662_RS13315 2636435 .. 2636453 -    -6  -3.98826   TCATGAACTCATAAA             GGAGATTT AAT AAAACTCC             CAAAACAAAAGGGAT  66 291
HC662_RS13310 2634761 .. 2634790 -  -9.5  -4.42653   ATGTTATTCACAAAA       TAACTATATACCC CCGC AGGTATATAGTCA        AGTGTGAAAGTTAAT  86 351
HC662_RS13305 2634356 .. 2634366 -    -4  -2.59177   ACTCCATATATCAAT                 GAAA TCC TTTC                 TTTCATTTATTTTTA  45 28
HC662_RS13300 2634051 .. 2634082 -  -6.8  -5.42975   TTACACAAATAAAAA      TTCGTCAACCT-TAA AGA TTATAGGTTGATGAA      TTTTTTATCGACTCT  89 30
HC662_RS13295 NONE
HC662_RS13290 NONE
HC662_RS13285 NONE
HC662_RS13280 NONE
HC662_RS13275 NONE
HC662_RS13270 2630517 .. 2630540 -  -3.9  -4.54727   CCTTTCAAAGGAAAA          GGGTATC TTTTTAGTTC GATACCC           TTTCACATTATTAGC  66 36
HC662_RS13265 2629519 .. 2629541 -  -4.3  -3.73072   AAGCTTTTTACCAAA           TTTAAGATT GTCAT AATCTCAAA           GGTCTATCTTTTTGT  57 198
HC662_RS13255 2627168 .. 2627188 -  -8.3  -5.70829   AACATTATAAAAAAA            CCGATGGTT TCA AACTATCGG            TTTTTATCTGACTTT 100 519
HC662_RS13240 2625289 .. 2625308 -  -9.3  -3.40878   AGGATCGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTGATTACTGCA  77 33
         gnd 2623331 .. 2623354 -  -6.7  -5.82388   AAAGTGCAAAAAAAA          TAAGGTGGC CTGTTC GCCCCCTTA           CTTTTTTTCTGTCGC 100 23
HC662_RS13220 2621716 .. 2621744 - -10.4  -4.99568   CAATAGGAAAGAAAA        TAACCTGTATCC GCACT GGAAACAGGTTA        TCCTTACCCATGCAT  93 41
HC662_RS13215 2620536 .. 2620553 -  -7.7  -5.14563   GTTTTCAGCAAAAAA             CACCCCT AAAA AGAGGTG              TTTTAAAGGGACGGT  89 249
HC662_RS13205 NONE
        yqeH NONE
HC662_RS13195 NONE
        yhbY NONE
HC662_RS13185 NONE
HC662_RS13180 NONE
        rsfS 2615661 .. 2615674 -  -2.4  -2.90615   AGCCTTGGTAAATCA               TTGG TTCATT CCAA                GCTCAAGATCCGCGA  42 9
HC662_RS13170 2614910 .. 2614931 - -11.7  -5.07053   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGACTTCTGCG 100 12
HC662_RS13160 NONE
HC662_RS13155 2612679 .. 2612707 -  -2.4   -2.5571   AGGCAATAACAAACG        CGAATTACGCAT CAATC ACACGTAGCTCG        TAAAAAGTGTATTCG  39 12
HC662_RS13150 2610206 .. 2610220 -  -2.8  -5.42259   TGATTTTGAAAAAAA               CGTTCA AAG CAAACG               AAATGATGCTGTAGA  79 165
HC662_RS13140 NONE
        holA 2608907 .. 2608928 -  -8.7   -5.1523   TGCATAATATAAAAA           CGATCCTCA ATGA TGGGGATCG            TTTTTTTCATTTCTT  91 10
         gpr NONE
HC662_RS13120 NONE
HC662_RS13115 2605650 .. 2605694 -  -5.1  -4.25859   TTCAATGTAAAACAA GAAAGAGAAAAG-TTCCCTG TCAAAC CTGGGCTGCTTTTCTCTTTC ACGCACTATTGATTC  66 31
        lepA 2603703 .. 2603723 - -12.6  -4.14627   TCTTTACAGAAAGAA            GCCGCAGT ACAGG ACTGCGGC            GGCTTCTATTGTTTT 100 31
        hemW NONE
        hrcA 2601382 .. 2601402 - -11.1   -2.7728   CTCAAAGTGTAAGGA            GAAGGGCGG GTG CTGCCCTTC            GATAAAATTTTCCAA  78 48
        grpE NONE
        dnaK 2598827 .. 2598855 - -10.4   -5.7946   CGGGCAAGAAAAAAA        GTCAAAGCCAAG AGATG CCTGACTTTGAC        TTTCTAATCATTGAA 100 101
        dnaJ 2597611 .. 2597624 -  -2.3  -2.72459   CATCCAATAATTAAT               CGCCT TTAA ACGCG                CGTTTTACCTTGTCA  40 7
        prmA NONE
HC662_RS13075 NONE
        mtaB 2594468 .. 2594489 - -10.9  -5.65927   CAGCTAAATAAAAAA           CCGGTACAT GTAA ATGCACCGG            TTTTTAGATTAAGAA 100 34
        rpsU NONE
HC662_RS13055 2592696 .. 2592718 - -11.4  -5.64274   TTATGTATAAAAAAA           GACATCTCTC TTA GAAAGATGTC           CTTTTCTTTGCCATT 100 40
HC662_RS13050 NONE
        floA NONE
HC662_RS13040 2589782 .. 2589823 - -13.9  -4.96848   TGCCCCATACAAAAA GAACCCCCTTTCATCTCAT ATGT ATGATTTGAAAGGAGGTTC  TAACACTTTAATTTT 100 33
        yqfC NONE
        yqfD NONE
HC662_RS13025 2587289 .. 2587314 -  -9.1  -5.00765   AAGCAATCATAAAAA         TGACCCGAT AACGCGCG ATCGGGTCA          TTCAGCATTAATTTT  91 33
        pgpH NONE
        ybeY NONE
HC662_RS13010 NONE
HC662_RS13005 NONE
HC662_RS13000 NONE
HC662_RS12995 2582561 .. 2582571 -  -2.4  -3.54424   CCGCACCTTCCTAAA                 GCAG GAG CGGC                 CAAGAGGTTTATAAA  46 34
        recO 2581532 .. 2581574 - -17.9  -5.30155   GCAGCAACCAAAAAA CTCCCGTCTCTATGCTTGC CAGCC GCAAACATAGGGACGAGAG TTCTCCCGCGGTTCC 100 227
        glyQ NONE
        glyS 2578521 .. 2578548 -  -4.1  -4.18161   TATAAATGGGGAAAA        GACGATTACCG ATCACA CAGCAACCGCC         TTTTCTCTCTTTATT  59 36
        ccpN NONE
HC662_RS12970 2576928 .. 2576948 -  -4.7  -4.70659   TGGCATAGCCAAAAA            CCCAGGA TAGAGCG TCCTGAG            TTACATGTTTTTTGT  72 26
HC662_RS12965 NONE
HC662_RS12960 NONE
        rpoD 2573008 .. 2573037 -  -8.7  -5.40072   TCTTTTTGAAAAAAA       GA-AGAACGGATCT GCA AGACCCGTTCCATC       TTATTCGAGGAAATC 100 26
        cccA 2572209 .. 2572229 -  -7.5  -5.39721   CTATCATATAAAAAA            TCAGCCAGG AAT CCAAGCTGA            GCGAATGATTTTAAG 100 143
HC662_RS12940 2570301 .. 2570321 - -11.2  -5.48054   AGTAAAAGCAAAAAA            CTGAGGCT GTTAA AGCCTCAG            TTTTTTTATAGAAAT 100 31
        cshB 2567022 .. 2567033 -  -2.2  -3.63515   GCCTATTCTCAACAA                CAGG TTCC CCTA                 CTTTCTTTTTTTAGA  48 23
HC662_RS12920 2566106 .. 2566123 -  -9.1  -5.11033   TACAAGCTGAAAAAA             CGGGGGA TAAG TCCCCCA              TTTTTTATTGCTGTA  91 30
HC662_RS12910 2564763 .. 2564797 -    -8  -4.76041   CACATGTATGAAAAA    GAAAATGGC-AGCTG TCTGAC CAGCAAGCCATTTTC     TTTACTGCAGATAAA  84 77
         zur 2564230 .. 2564262 -   -15  -2.77344   GTACGTGTCAATAAC      TGAAAAAGGAGCCC AACCG GGGCTCCTTTTTCT      CATATAAGCAATTAC 100 37
HC662_RS12895 2563097 .. 2563118 - -14.5  -5.28414   GAAGAAACACAAAAA           GCTTGACGG GAAC CCGTCAAGC            TTTTTTGTGTTAGAA 100 35
HC662_RS12875 2559954 .. 2559966 -  -3.3  -2.80354   TATATGTACTGAAAT                GCCGC CTC ACAGC                GAGCCTTTCTTCATT  44 158
HC662_RS12870 2559278 .. 2559301 -   -11  -5.80248   GAAGACAGAAAAAAA          CAAGGCCCCC TATT GAGGACCTTG           CTTGTGTCATTATTT 100 35
HC662_RS12865 2557831 .. 2557850 -  -5.7  -5.05113   TTTACAGAAAGAAAA            GACACTC AAGTAA GAGTGCC             AGTTTTCATTCTAAA  78 87
HC662_RS12860 2555619 .. 2555637 -   -11  -5.93809   TTTGTATAAAAAAAA             CGCCCACA TCA TGTGAGCG             TTTCTTTTTAGTCAT 100 33
HC662_RS12855 NONE
        pstC NONE
        pstA NONE
HC662_RS12840 NONE
HC662_RS12835 2551056 .. 2551074 - -13.2  -5.70829   AACACGATAAAAAAA             CAGGCTGA CTG TCAGCCTG             TTTTTATTTACCCAA 100 33
HC662_RS12820 NONE
HC662_RS12815 2548478 .. 2548489 -  -2.2  -3.37912   GACTTATATATAATA                CCAC TATA ATGG                 ACGGAAAGCTAGGCT  45 46
        rpmG 2548221 .. 2548246 - -10.5  -5.80817   CGGAATAGAAAAAAA         GCCAGAACCTT TTTC AAAGCTCTGGC          TTTTTTCTTACACCT 100 56
HC662_RS12805 NONE
HC662_RS12800 2547372 .. 2547388 -    -8  -5.38497   ACTGAAAGCAAAAAA              TCCCGT TTTTC ACGGGA              TTTTAGAAAGCTTGC 100 28
HC662_RS12795 2545735 .. 2545752 -  -4.8  -3.53566   AGTCAAGAAGAAAAC             GCTGAC AAAAAA GCCAGC              CTCCCTCCTTAGGTA  56 52
HC662_RS12790 NONE
HC662_RS12785 2544424 .. 2544434 -  -2.6  -3.94333   CATTAACACATCAAA                 TTAA ATC TTAA                 CCTGAACATAACAAA  53 64
HC662_RS12780 2542403 .. 2542437 - -12.8  -5.47218   GCGTATTTAAAAAAA     GAAAGCCTCCCGCTAC TTT GATGCGGGAGGCTTTG     TGATTATGATGCCTG 100 29
HC662_RS12775 2541216 .. 2541226 -    -4  -5.24129   TTGCGGCAGAAAAAA                 GAAA AAG TTTC                 AGTTACTCATGAAAA  76 28
HC662_RS12770 NONE
HC662_RS12765 2539760 .. 2539781 - -13.1  -4.35518   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATTGCT 100 39
HC662_RS12755 2538762 .. 2538786 -   -13  -4.82855   CATTAAATGCAAAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA 100 31
        mgsR 2537852 .. 2537890 - -13.3  -4.66953   TGAACAGGTGAAAAA   CCGAAGATAAGCTGATT CATAT AATCAGCGGATCTTCGG   TTTTTCATCATGCAG 100 33
HC662_RS12735 2536769 .. 2536797 -  -8.9  -5.16572   ATTGAAGTTAAAAAA        GCTGAATAGCC CGATGGT GGCTGTTCAGC        TTTTCCCAGAATAAT  91 62
        corA NONE
HC662_RS12720 2533847 .. 2533870 -   -14   -5.8187   TACTCAATAAAAAAA          CAGGCATGAT GATC ATCATGCCTG           CTTCACTCCATCTTT 100 43
HC662_RS12715 NONE
       comGA NONE
HC662_RS12705 NONE
       comGC NONE
HC662_RS12695 NONE
HC662_RS12690 NONE
HC662_RS12685 NONE
HC662_RS12680 NONE
HC662_RS12675 2529253 .. 2529274 -  -2.9  -6.00814   AAGAAGCAAAAAAAA           GGTACCCGC TCGC ACAGGTACT            GTTCAAACAAAAAGT  95 233
        tapA NONE
HC662_RS12660 2527496 .. 2527507 -  -5.8  -3.73414   GATATTATATCGAAA                CCTG TTGC CAGG                 TTTACAACTGATGTT  64 39
        tasA 2526617 .. 2526659 - -12.8  -4.15044   TCTTTTGTTAATAAA CGTAGAGATGGCCCAGTATA TGA TATACCGGGCCATCTCTTTT TTATTGCTGCTATTA 100 38
        gcvT NONE
HC662_RS12625 NONE
HC662_RS12620 2518956 .. 2518997 - -13.3  -3.43619   ATTAAAGCGAAGTAA TAAAGCAAAACAGCTGTCT GTAT AGACAGCTGTTTTTATTTA  TCTCTCTTCCGCCTC 100 23
        lipM 2517511 .. 2517524 -  -2.4  -3.43071   GTTTACACTAATGAA               CTTG AAAAAA CAAG                GATGCTCCGCAGGCC  46 52
        mntR 2516998 .. 2517019 - -10.1   -5.1675   CGACGCATCAAAAAA           GACGGCCTC CTTC GAGACCGCC            TTTTTACTGATTATG  93 29
HC662_RS12600 2515962 .. 2515977 -  -2.5   -5.7946   TTCTCAAGAAAAAAA              GCCAG ACTCAG CTGAC               TGTTATAGAAGGGAA  83 71
HC662_RS12585 2513826 .. 2513844 -  -7.5  -5.08824   TTCTCATGTAAAAAA             TGTTCAC TTCTC GTGAACA             TTTTATCATACTGGA  89 54
        aroQ NONE
        papA 2512284 .. 2512303 -  -2.2  -2.74563   CCTATATTCCAATCA            CAAAATAA TAAG TTCTTTTG             GGGAATGGGTGATTG  41 3
         efp 2511662 .. 2511685 -   -11  -6.22802   TTGGACAAAAAAAAA          GCCTGCTCCC ATTC GGGAACAGAC           TTCTTATTTCTTTCT 100 39
HC662_RS12565 NONE
    spoIIIAA NONE
HC662_RS12550 NONE
HC662_RS12545 2508572 .. 2508586 -  -6.4  -4.42386   CCTGTATTGATAAAA               GATCCA AAG CGGATC               AACTCACTTTCAGCA  75 198
HC662_RS12540 NONE
HC662_RS12535 2505817 .. 2505841 - -10.2  -5.31456   TGAATGCAGAAAAAA          GGAATAATAG TCACC CTATTATTCC          GGTACATCTGCTTTT 100 19
        argR NONE
        recN 2503500 .. 2503524 - -14.4  -5.40072   TGTGTGCGAAAAAAA          TAAGCTGCGC TTCTC GCGCAGCTTA          CCCAGTTGTTTTGAC 100 23
      spoIVB 2502048 .. 2502066 - -14.6  -6.23317   ATAAAAACAAAAAAA             CTGCCGGA AAT TCCGGCAG             TCAGCTTGCTTTTTC 100 26
       spo0A 2500916 .. 2500955 -  -6.6  -5.07652   GCCCCTAAAACAAAA  CGCCTCCTATTTATCAGC GCGA ACTAATAAATAACAGACG   TTTGATTTAATCATC  83 58
HC662_RS12510 2500469 .. 2500486 - -11.3  -5.46629   AATATTTTAAAAAAA             GCCCCTT GTAT AAGGGGC              TTTTTCTCTAATCAA 100 206
HC662_RS12495 NONE
HC662_RS12490 NONE
HC662_RS12485 2497003 .. 2497024 -  -8.7  -5.32565   GAATGAATGAAAAAA           GAAGGCTGC GCCA ACAGCCTCC            TTCTAAAACAACTAT 100 37
HC662_RS12480 NONE
HC662_RS12475 NONE
HC662_RS12470 NONE
        mmgD NONE
HC662_RS12460 NONE
        prpB 2490128 .. 2490145 - -10.5  -5.04385   GATAGCTGCAAAAAA             GCCGGAG AACG CCCCGGC              TTTTTTGATCAAAAC  93 40
HC662_RS12445 NONE
        yqiS NONE
HC662_RS12435 NONE
HC662_RS12430 NONE
        lpdA 2482976 .. 2482986 -  -2.4  -3.80855   GCTTTTAAAAATGAA                 TGGC TTT GCCG                 TCTGCGGCAAGCGCT  50 4
      bfmBAA NONE
HC662_RS12415 NONE
       bfmBB 2479618 .. 2479652 - -10.3   -4.9792   TATTGCATAGAAAAA     GAGCATTTTTTGA AGATATGTG TCAAAAAATGCTC     TTTTTGCTTATTTAG  93 37
        brxB 2475895 .. 2475915 - -10.4  -5.28176   TTTATGCATAAAAAA           CCGGG-GCC GCTA GGCACCCGG            AGTGTTCGTCTTATA 100 36
        artP 2474865 .. 2474885 - -11.2  -5.10461   CCTATTCAATAAAAA            GGCTCAAC GAAAA GTTGAGCC            GCTTTTTTTACTTCT  93 33
        artQ NONE
        artR 2473404 .. 2473424 -  -5.5   -5.4505   TTCTTCAATAAAAAA            GAAGAAG CTTTAGC CTTCTTC            TTTTTTTCTATATTC  83 40
HC662_RS12370 2472342 .. 2472395 -  -7.1  -5.64304   GAACATAAGAAAAAA CGCATAAGCTCCTCCTTTTTCATTAG GTTGA CCAATGAA---GGAAGAGCTCATGCG AATCATGTGAGTGAT  93 28
HC662_RS12365 2471673 .. 2471687 -  -3.6  -3.70051   AAACACGCTAAAATA               TAGACA GAT TATCTA               AGGAGTGAAATCATG  53 151
         mce NONE
HC662_RS12350 2469678 .. 2469690 -  -7.7  -2.75844   CCCTCCATGTTAAAG                CGGTA TGT TACCG                TGCTTTTTTTTCGGT  62 7
HC662_RS12345 2468504 .. 2468514 -  -8.2   -5.5074   GAATGCAAGAAAAAA                 CCCG ATG CGGG                 CAAGCGCACTCGGGT 100 50
HC662_RS12325 2464674 .. 2464688 -  -2.8  -4.36914   CCTGTTCCGATAAAA               TGAATG CCG CTTTCA               GCGAGCTCTTTGTTA  60 482
HC662_RS12315 NONE
HC662_RS12310 NONE
        dsdA 2460553 .. 2460573 -  -6.9  -4.19238   CTCTGAAGGTTAAAA            CCCTTACAA AGA TTGTAACGG            AAAACCCTTTCACTG  73 46
        coaA NONE
HC662_RS12295 2458972 .. 2458994 - -13.5  -5.95539   CTTTAAACAAAAAAA           CGGGAGAGA ACCAA TCTCTCCCG           CAAAAATGAGGTGAT 100 203
HC662_RS12270 NONE
HC662_RS12265 2455147 .. 2455174 -  -7.7  -2.99649   ATATTTTTACACATA        TTTCTCCCCCC AGTGCA GGAGGGAGAGA         CTTCACAGCACAATA  64 28
HC662_RS12260 NONE
HC662_RS12255 NONE
HC662_RS12250 2453136 .. 2453146 -  -2.4  -3.31461   CATGTATGTTCATAA                 GGTG AGA CCCC                 CGTTTTCATCATTTT  45 9
HC662_RS12245 NONE
HC662_RS12240 2452522 .. 2452547 -  -9.8  -5.64304   CAACAGAATAAAAAA         GCGAAAG-GCC CCTTC GGCTCTTTCGC         TTTTCCATTTCATAA 100 35
HC662_RS12230 2451188 .. 2451210 - -14.9   -5.1523   CTCATAACAGAAAAA           CCAGCACCC TGTAT GGGTGCTGG           TTTATTTATATTGAT 100 27
HC662_RS12215 NONE
HC662_RS12210 2448266 .. 2448284 -    -9  -2.55378   AAGTACAGGAGGAAC             TGAGTTAA TTT TTAACTCA             CGGTTTAATTTTTCC  67 23
        ansA NONE
        aspA 2445226 .. 2445263 -  -9.4  -3.55444   TCCCTATGTTGTAAA   CAGCTTATTCATCC GACTATCCGG AGATGAATAAGCTG    TATTTTGTTCAAATT  78 41
        mleN NONE
HC662_RS12185 2442359 .. 2442382 - -12.5  -5.32882   CATGATGAGAAAAAA          CAGCACCTG TTATGC CAGGTGCTG           TTTGACTTCATTTAT 100 37
HC662_RS12180 2442032 .. 2442050 -  -3.2  -2.57069   TGTATGAAAGAAACG             GAAAAACA TGC TCTTTTTC             AGAAAGAAACGATAG  43 50
      spoIIM NONE
         fur 2440730 .. 2440750 -  -8.3  -5.32699   GGAAACAGCAAAAAA            CCCTTTCCC CAG GAGAAAAGG            TTCGCGCTCGGCACC 100 43
HC662_RS12165 NONE
        xerD 2439502 .. 2439519 - -12.7  -5.63517   GTTCTAAACAAAAAA             GCCGCAG CCAC CTGCGGC              TAGGCGCGCGGATGA 100 25
        deoB NONE
HC662_RS12150 2437292 .. 2437320 - -19.7  -5.60993   TTTGGCATAAAAAAA        GAGAGCTGCGTCC ATG GGACACAGCTCTC        TTTTGATCTTGCTCT 100 51
HC662_RS12145 2435976 .. 2435987 -    -3  -3.06183   TCGATTTCGACGGAA                TGAA TTCC TTCA                 CCGTGACAAAACTAG  44 57
     spoIIAA NONE
     spoIIAB 2435140 .. 2435151 -    -3   -2.7186   AAATCTCCTTAATTA                CAAA GCGC TTTG                 CTTTTTGATAAGTGC  41 7
        sigF 2434336 .. 2434358 -   -12  -5.36441   TTTGCACACAAAAAA           GCCAGCCTGC ATC GCAGACTAGC           TATCCGTATGATCCA 100 21
      spoVAA NONE
      spoVAB NONE
      spoVAC NONE
      spoVAD 2431704 .. 2431716 -  -3.4  -3.06162   TAGTCCATGTTAAGA                TGCA CCTCC TGCA                CGCTCAAATACAACC  46 7
      spoVAE NONE
     spoVAEA NONE
      spoVAF 2429223 .. 2429243 -  -6.9  -4.09685   GCTTATGGGTGAAAA            GGACAGT TTTATCG ACTGTCC            CTTCATAATTAAGAC  73 77
        lysA 2427847 .. 2427864 - -12.7  -5.65927   TATTCAAATAAAAAA             GCGCCGA GAAA TCGGCGC              TTTTTTATTGCTTTA 100 30
HC662_RS12080 2426247 .. 2426267 -  -6.8  -5.63517   TTCGCAAATAAAAAA            GCTCCCCC GAGAT GAGGAAGC            CTTCTGCTGCCTATT  90 39
HC662_RS12070 2424965 .. 2424975 -  -3.2  -4.72188   CGAATCGAAAAGAAA                 TCCC ATC AGGA                 CCATTGAAGTGATTT  67 451
        lepB 2424322 .. 2424345 - -13.2  -5.53079   AAAAGATATAAAAAA          GCAGCCTCCT ATTC AGGAAGCTGC           TAGATCCTAATTCGT 100 32
HC662_RS12060 2423743 .. 2423763 - -11.9  -6.23317   AGAAAAACAAAAAAA            CACCCTTCG ATC CGAAAGGTG            TTTTTTGTTAATCAT 100 33
        ribE NONE
HC662_RS12045 NONE
        ribH NONE
        ribT 2419414 .. 2419437 - -16.8  -5.97575   AACGGAGAAAAAAAA          GCAGAGGCTG ATTG CAGCCTCTGC           TTAATTATTGTATGA 100 26
        scpA 2417400 .. 2417412 -  -6.2  -2.62244   TTGCTCAAGAAAAGT                CGGC GTTGT GCCG                TATAAAATAGCCCTT  54 459
HC662_RS12015 2416641 .. 2416661 - -11.2  -5.90231   ACAAACATAAAAAAA            CTCTCCCT GAAAA AGGGAGAG            TAAACGTTATCTGAT 100 32
HC662_RS12010 NONE
        spmA NONE
        spmB 2414270 .. 2414284 -  -4.2  -5.58209   CCAAATCCAAAAAAA               CGCC GTTTTCA GGCG               CTCCCAAATAATAAC  84 19
        rluB NONE
        resA NONE
        resB NONE
        resC NONE
        resD NONE
        resE 2407366 .. 2407386 - -12.6  -5.40072   TGGCTTTTAAAAAAA            CACCCGCT TAATC AGCGGGTG            TTTCTTATGGAACAA 100 68
        sigX NONE
HC662_RS11960 2405557 .. 2405609 - -15.3  -4.08945   ACTATTTTTTGAAAA TTTCTATAAACTAAAAAAAGAGCCT GAA AGGGCCCTTTTTTAGTTTATGGAAA TCGGATTTGGAGCAG 100 12
HC662_RS11955 2404693 .. 2404712 - -10.8  -5.68023   CCATAATCAAAAAAA            CTCAAGCT GTAT AGCTTGAG             TTTTTTTATTGTTCT 100 39
        fmnP 2402015 .. 2402030 - -10.4  -5.57396   AGAAGTAACAAAAAA              GCTCCC CAAA GGGAGC               TTTTTTCATTTAATG 100 35
HC662_RS11935 NONE
HC662_RS11930 NONE
HC662_RS11925 2397852 .. 2397876 - -14.3  -3.01712   TGTTTGTTGGGAAGA          GGAAGCAGCCG CGG CGGTTGCTTCC          TCCTTATTTGCTGAA  95 466
HC662_RS11915 NONE
HC662_RS11910 2396127 .. 2396146 -  -6.6  -4.04206   CTACTTGCACACAAA            TCATATAA CACA TTATATGA             GATGATGAGTCATAG  71 132
HC662_RS11905 2395478 .. 2395495 -    -7  -6.09888   TTTTAACAAAAAAAA             CTGCTG TGAAAT CAGCAG              TTTTTCGTGCATTCT 100 40
        gudB 2394031 .. 2394052 -  -7.4   -5.7946   TTCCGAATAAAAAAA           TCTCCTAT TTTATC ATAGGAGA            TTTTTTATTTTTATG 100 53
        ypdA 2392966 .. 2392990 -  -9.4  -5.86609   TTAAAAAAACAAAAA          GAGCATACGA ATTCA TCATATGCTC          CCTTTCTTTAATGAT 100 33
        prsW 2392199 .. 2392219 - -12.5  -5.36441   TCGGCACATAAAAAA            GCCGCACGG TTT CTGTGCGGC            TTCTATATTTGCATC 100 28
        sleB NONE
        ypeB 2389737 .. 2389759 -  -8.5  -5.64006   ATGTAATGAAAAAAA           GGAAAAGAC ATTTA GTCCTTTCC           TCCTATTTTTTATAG 100 35
HC662_RS11875 NONE
HC662_RS11870 2388800 .. 2388816 -  -3.7  -2.73203   TGATGAATAATTAAT              GTTTGAA GGT TTCAATC              CTATTGTTTTCCTCC  45 4
HC662_RS11865 2387910 .. 2387934 -  -9.5  -4.01902   ATATGTATTAAAGAA          TCATCCAAAAA AGT TTTTTGAATGA          TCAATAAAAAGTTTT  81 133
        rpsA NONE
HC662_RS11855 2385567 .. 2385590 -   -14  -5.56263   ATCATAAAACAAAAA          GCCCAAAACT CATA AGTTTTGGGC           TTTAATATTTATCGC 100 34
HC662_RS11845 NONE
HC662_RS11840 NONE
HC662_RS11835 2383607 .. 2383622 -    -9  -4.72007   TTTTATGAAAAGAAA              CCCTTC AGAG GAAGGG               CTTAACTCATTTATT  88 72
        engA NONE
        gpsA 2380920 .. 2380949 -  -5.8   -5.9218   GATAGAACAAAAAAA       CTGAAGCAAAGA GGGGGA CCTTCACTTCAG        TCAAATTGACTATAT 100 226
HC662_RS11820 NONE
HC662_RS11815 2379818 .. 2379850 -  -9.3  -5.75599   TAAAGTATAAAAAAA      CCTTTCTCCCT ATTTGTATGCA AGGGAGAAAGG      TTCATTCCTTTTTCA 100 27
      spoIVA 2378159 .. 2378182 -  -3.2  -5.69793   AGAGCAAAGAAAAAA          GACCTC-CCAT TCT ATAAAGAGGTC          TTGCGGTATTACAGG  88 34
         hbs 2377458 .. 2377486 - -14.7  -3.34715   CATGCTCTTGAAATA        TGAAAAGCCCCTT AGA AAGGGGCTTTTCT        GTGAAGAAATAAAGT 100 79
        folE NONE
        mtrB 2376516 .. 2376530 -  -2.7  -3.01924   CATTTGCGTTGAACA               GCGGG AACAG CCAGC               TTATTTTTTTTCGCT  43 26
HC662_RS11790 NONE
        menG NONE
        hepT 2373881 .. 2373891 -  -6.8  -3.48064   CTGATAATTAATCAA                 TCCG GGG CGGA                 GAAATTTCTTAATAT  63 50
         ndk 2373195 .. 2373210 -  -7.6   -5.7946   GTTTCAATAAAAAAA              TCAGCT TTTC AGCTGA               TTTTAGATTGTTGGG 100 166
        cheR 2372324 .. 2372337 -  -2.5  -3.21438   AACTACTATAACATA               TTTTT CAGC AAAAA                GTCAGTCTATCTTTT  44 32
        aroC NONE
HC662_RS11760 NONE
        aroH 2369487 .. 2369510 - -12.6  -4.76087   TATATAACAAATAAA          CCCAAAAGAA AGGC TTCTTTTGGG           TAGAATAAACATACA 100 144
HC662_RS11750 NONE
        trpD NONE
        trpC NONE
HC662_RS11735 NONE
        trpB NONE
HC662_RS11725 NONE
HC662_RS11720 2362389 .. 2362409 -  -9.8  -3.89212   GATTTATAGACTAAA            GAGGTGAT ATTTG ATCACCTC            TTACAAAATTTCAGC  83 26
HC662_RS11715 NONE
        aroA 2359928 .. 2359957 - -18.1   -3.3344   AGTCAATCTGCACAA       CAAATCCTGAAGC AAGA GCTTCAGGATTTG        TTTGAAAGCTTATTT 100 16
HC662_RS11705 NONE
HC662_RS11700 2357687 .. 2357708 - -10.9  -4.02817   CCTTTACAACAACAA           GCCTTGCAA TACG CTGCAAGGC            TGGTCATATTATGTG  86 34
HC662_RS11695 NONE
HC662_RS11690 NONE
        qcrB NONE
HC662_RS11680 2355029 .. 2355045 -    -8  -5.36441   TGTCCATATAAAAAA              GCTGAC GCCGG GTCAGC              TTTTGATAATAAAAG 100 72
HC662_RS11675 NONE
        ypjB 2353500 .. 2353515 - -11.8  -6.11243   ATTTAATAAAAAAAA              GGCGGC TGCC GCCGCC               CCTCATGCTCATTTA 100 34
HC662_RS11660 NONE
HC662_RS11655 NONE
        mgsA NONE
       bshB1 NONE
        bshA NONE
HC662_RS11635 NONE
HC662_RS11630 2346714 .. 2346734 -  -6.2   -5.1925   TTACAAGCCAAAAAA           CCTTC-CGT TACA ACGAGAAGG            ATTCTTCACTTTCTA  84 190
        panB NONE
        panC NONE
        panD 2344549 .. 2344564 -  -7.5  -5.10163   AATCTTAAAAGAAAA              CCCCC GATAAA GGGGG               CTTTTCTTCTACAAA  89 34
        dinG 2341635 .. 2341649 -  -8.5  -3.63627   CTCCCACACCGGAAA               GCCGC TTTAT GCGGC               TTTTATTCATTTTTC  73 28
HC662_RS11605 NONE
HC662_RS11600 NONE
        aspB 2339611 .. 2339630 -  -6.4  -5.00642   CAATGCAGATAAAAA            GCGGCT TTTCTGTC AGCCGC             TTTTTGATCTGTTAG  81 37
        asnS 2338165 .. 2338182 -  -7.7  -4.62069   CCTTTACTGTAAAAA             GTCTCCC TTGC AGGAGAC              TCTTTTTTTGTTTCA  83 51
        dnaD NONE
         nth 2336298 .. 2336315 -  -6.9  -2.87132   TTGTTCCCGCATATA             CAGCGAG CAAA CACGCTG              TTGCCGGTTTGACTA  56 448
        kdgR NONE
HC662_RS11555 NONE
         eda NONE
        kdgT 2331077 .. 2331102 -    -9  -3.31905   ATTGTTTATATAAGA         GGCTGCCG GTATTTTTGG CGGCAGCC          TTCTTTGTTCAGTTG  72 34
        ypwA 2329464 .. 2329486 - -13.4   -5.0538   TTTGATTCTAAAAAA           GCCTGACGGC CGC ACCGCCAGGC           TTTTTATTACGACAG 100 32
         xpt 2328590 .. 2328604 -  -3.5  -3.39895   TTTTTCATGAATGAA               CCTCC TGTAC GAAGG               ACACTTTTCCTTCTT  49 0
        pbuX 2327249 .. 2327264 - -10.4   -5.1287   TTTATATGCAAAAAA              CTCCGC CGCG GCGGAG               TTTAGACTGCTGTTT  93 27
HC662_RS11525 NONE
HC662_RS11520 2325574 .. 2325584 -    -4  -2.66042   AACATGGATGAGAAT                 GATT TTC AATC                 GCTATTTTATGCTGT  45 27
        fbpC 2325366 .. 2325382 -  -7.9  -5.53436   AGAGAATAGAAAAAA              GCCGCCA TTA CGGCAGC              TTCTATAAAAGAAAA 100 69
HC662_RS11510 NONE
HC662_RS11505 2321299 .. 2321309 -    -4  -2.87931   CTTACGTCGGATACA                 CATA GTA TATG                 CTTCCGGCAGGAGAT  45 65
HC662_RS11500 2321091 .. 2321116 -  -8.4  -5.93252   CCCAAAAATAAAAAA         CAGCATCTCT TCGATT AGAGATACTG          TTTTAATAACATCAG 100 37
HC662_RS11495 2320124 .. 2320156 - -11.5  -4.77629   AAAAGCAATACAAAA     CGCTAGAGAAGATC TTACAC GATCT-CTCTAGCG      TTCAGCTTTTCGAGC 100 7
HC662_RS11475 NONE
HC662_RS11470 2317901 .. 2317933 - -20.9  -3.78329   CTTGATGAATTCAAA      GAATAAAAACCGCAG CTT CTGCGGTTTTTATTC      TTTAGTGATTGGTTA 100 27
        degR 2317280 .. 2317299 - -13.6   -3.3663   ATGACGACAAATAGA            GGAGAGGC ATTT GCCTCTCC             TATTTGATTTTCATC 100 25
HC662_RS11435 NONE
HC662_RS11430 NONE
HC662_RS11425 2311858 .. 2311874 -    -8  -5.66684   GAATTCACAAAAAAA              GGTGCA TGATC TGCACC              TTTTTCTTTCTATTC 100 35
        ilvD 2309822 .. 2309870 -  -7.8  -5.72616   ATTGACATAAAAAAA GCCCCCTCTAT--TATCCTTCA TCTGAAG TAAAGGATACTATAGAGAGGGC TGGATTTCAAATGTT 100 76
        brxA 2309362 .. 2309378 -  -9.4  -5.26119   CTCCCAAAAAGAAAA              TGCCCG GAAAA CGGGCA              TTTAGCAGTGTGCAT 100 27
HC662_RS11410 2308539 .. 2308560 - -11.6  -4.24075   ACCGATTAACAGAAA           GCCCGTGA GAGTAA TCACGGGC            TTGTTTTACTTGCAG  93 18
HC662_RS11405 NONE
HC662_RS11400 2307095 .. 2307116 - -10.3  -5.64304   TAACACAATAAAAAA           TCATTTCTG AACC CAGAAATGA            TTTTATTATAGTCAG 100 37
HC662_RS11395 NONE
HC662_RS11390 2305753 .. 2305771 -  -3.8  -4.50193   ACGAACCAATTAAAA             TCCTCCCG CTT CAGAAGAA             TTCTTTTTTTCATAC  64 1
HC662_RS11385 2305101 .. 2305121 - -15.5   -5.4505   TGTCGTAACAAAAAA            GCGCAGTCT TAA AGACTGCGC            TTTTTTATGCACGTA 100 30
        ilvA 2301877 .. 2301897 -  -3.9  -3.61902   TTCTATTATATACAA            TGCCAGCCA GGC TGTCTGTCA            TTTTGCGCGGTTGTG  53 49
HC662_RS11365 2301526 .. 2301569 -    -3  -4.04482   CCGGTCAAAAAAAAT CCTGCATGCCTCCCAATCTA CAAA TACAAAGGGGGACACACAGG TATAAACGCCATATC  55 39
        scuA NONE
HC662_RS11355 NONE
HC662_RS11350 NONE
        ypmT 2299200 .. 2299219 -  -2.1  -5.27477   AGGCGAACGAAAAAA            GAGACGT TGTTTC ATGTCTC             TTTTTCATGATTTAT  72 37
HC662_RS11340 2297773 .. 2297800 -  -7.1   -5.4477   AAACGGTGAAAAAAA        GCACATACC GCTATATATG GGTATGTGC         TTTTCACAGCGCTCA  91 42
        msrA NONE
        msrB 2296202 .. 2296230 -  -9.6  -4.98758   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTTTGATTTATT  91 36
HC662_RS11310 2292965 .. 2292981 -    -8    -5.252   GATCTGCAGAAAAAA              GCAGCT TACTC AGCTGC              TTTCTTTTTTAGCCG 100 34
HC662_RS11295 2291012 .. 2291034 -  -6.9  -5.19879   CGTCAAACATAAAAA           CGGCTCCGC AGCAA GCAGAGCCT           CTGTCATCATTTAAA  91 36
HC662_RS11290 NONE
HC662_RS11285 NONE
HC662_RS11280 2288658 .. 2288681 -  -8.9  -5.36441   TTTTCACACAAAAAA          GAGCCTTCC TGAACG GAAAGGCTC           TTTTTGAATTTCACC 100 43
HC662_RS11270 NONE
HC662_RS11265 NONE
HC662_RS11260 NONE
HC662_RS11255 NONE
        ablB NONE
        ablA NONE
HC662_RS11240 NONE
HC662_RS11235 2281734 .. 2281751 - -11.3  -5.39721   TGAGGACATAAAAAA             TCCGCAG TGAT CTGCGGA              TGAAACAGCTATTAT 100 37
HC662_RS11230 NONE
HC662_RS11220 2280462 .. 2280490 -   -14  -3.84873   ATAGAACATGAATAA        TAAAACCGGAGC TGGCC GCTCCGGTTTCA        AGCCTCAATCATCTT 100 30
HC662_RS11215 NONE
        yodL 2279402 .. 2279417 - -10.4  -4.44974   TTAAACTGCAGAAAA              CTGCGG AAAT CCGCAG               TTTTCTTTTCATTTT  89 34
        deoD 2278325 .. 2278350 - -11.9  -4.09117   CGCATTCATAAAGAA         GAGGC-TGCCGG CAC CCAGCACGCCTC         TTGATTTATTTTATT  95 36
        ldcB 2277424 .. 2277448 - -11.5  -4.53047   ACCAAACACAATAAA          GCCCGCTTA TCAATTG TAAGCGGGC          TTTTACTGTTAGATT 100 34
HC662_RS11180 2274751 .. 2274775 - -20.1  -5.24531   AGGGGGCATAAAAAA          CCCATACGCGG CAG CCGCGTATGGG          TTTTTTACATTTCTT 100 30
HC662_RS11165 NONE
HC662_RS11160 2271313 .. 2271337 - -14.4  -4.84274   TAAGGATATGAAAAA          CCTTAGTCCG AAATA CGGACTAAGG          TTTTTTTATACAATC 100 31
        yodB 2270144 .. 2270181 - -11.5  -5.24799   TGACAAATATAAAAA   GTCATGTAAGCGGT-ATG AAC CACCACCCCTTACATGAC   TTTATTATTGAAATA 100 68
HC662_RS11140 NONE
HC662_RS11135 2267355 .. 2267376 - -15.9  -5.26316   TCATCCGATAAAAAA           CGGCCTGCA CCGA TGCAGGCCG            TTTTTATTAATAGAA 100 32
        rarD 2265863 .. 2265873 -    -4  -2.90054   CATGAAATGATTATA                 CATA ATA TATG                 GTTCAGCTGAAAAGC  47 49
HC662_RS11120 NONE
HC662_RS11115 2265201 .. 2265220 -  -2.1  -3.53091   ACCCTTTTCTTTAAA            CTGTGAA CGGTTT TTCACTG             ATTTGCAGAGAAATA  46 1
       bshB2 2264480 .. 2264504 -   -13  -5.37593   CTTGAAATTAAAAAA          GGTATAAGGC TAAAG GCCTTATACC          TTTTTGATTAATCAT 100 33
HC662_RS11095 2261282 .. 2261303 -  -6.7   -5.0916   CCTTCAAGACAAAAA           GCATTCAGCT TGA AG-TGAATGC           TTTAAAAAAGATCCG  83 96
HC662_RS11090 2259888 .. 2259914 - -13.9  -4.28651   ACGAAAATTCCAAAA         TGCCTGTTCTT TTGAT AAGAACAGGCA         TTTATATTATGCGTT 100 32
HC662_RS11085 2258273 .. 2258285 -  -4.8  -5.76237   GATATAAACAAAAAA                GCCT ATAAA AGGC                TTTTTGTCATACTCA  93 44
HC662_RS11080 NONE
HC662_RS11075 2256656 .. 2256666 -  -5.4  -3.64703   GCTCCCTCATTCAAA                 CAGA GTT TCTG                 CGATATTTCGGACGG  59 6
HC662_RS11070 2254696 .. 2254740 -  -9.6  -5.05153   ATTTGAAAAAAGAAA CGCCA-AAAAGCATAGGATAA TGGG CTATCCTATGCTTTTATGAAG CAGTTTTTTCAGCAG  91 5
        sucA NONE
        odhB 2250351 .. 2250376 -   -12  -5.36441   TCGGCATACAAAAAA         GGTACATCAC TTTATC GTGATGTACC          TTTTTTTATTAGCCC 100 34
HC662_RS11050 2247774 .. 2247792 -  -8.8  -5.52986   ACTCTATTAAAAAAA             GCCCCC TTTTCCC GGGGGC             TTCTTGTTTTAAAAA 100 34
HC662_RS11030 2242968 .. 2242984 - -13.7  -5.37345   TTTAATCATAAAAAA              CCGCAGC TGA GCTGCGG              TTTTTTATATCCTCG 100 55
HC662_RS11025 2242305 .. 2242330 -  -2.6  -6.02914   TTTATATAAAAAAAA         GCCTAACCATT TTTTG AACGGCT-GGC         TCGTCAAATATTCAG 100 37
HC662_RS11020 2241571 .. 2241599 - -14.7  -5.75342   TTTTTTCAAAAAAAA        GCAAGTACACCTA ATA TCGGTGTACTTGC        TTATCATTTTTACTT 100 35
HC662_RS11015 2240800 .. 2240820 -  -9.8  -5.38047   TATGTATACAAAAAA            CTCCTATC GCATG GATAGGAG            TTTTGACTTGATTAG 100 37
        ssrS 2240393 .. 2240415 - -12.1  -5.58522   TAGATAAAATAAAAA           GCCATTTCC AAAAA GGAAATGGC           TTTCGCTACGTCTTG 100 24
        recQ 2238387 .. 2238424 -    -5  -3.53012   TCTCTGTGTTGGAAA   GACTTGCTGAACCCT TGATATAAT AGGCTTC-GCAAGTC   TTTTTGATTTGAACC  56 98
HC662_RS11000 2237343 .. 2237365 -  -8.4  -5.69379   ACAGAACGAAAAAAA           GACACAAGCC AAA AGCTCGCGTC           TTTTCTCACAATCTA 100 46
HC662_RS10995 2236411 .. 2236434 - -15.4  -5.27335   TGGTTTAAATAAAAA          GGATCTTGGC AGAT GCCAAGATCC           TTTTTGTAACCCCAG 100 99
HC662_RS10965 2230808 .. 2230831 -   -11  -3.66139   TAGACACACTTCAAA          GACCGGCGGCT TTC AGCC-CCGGCC          CTGTTAGATTTATGC  83 35
HC662_RS10960 2230148 .. 2230164 - -10.9  -5.81032   CAAGCTCAAAAAAAA              GCCATAC TCA GTATGGC              TTTTAATAATACGGT 100 28
        czrA 2228838 .. 2228876 -  -7.4  -5.50774   CACAATAAAGAAAAA   GACATCCTTGCCCGCTAG CAG CGATTAAGCAAGGATGTC   TTTTTTAATCGTGTT  91 30
HC662_RS10940 2227144 .. 2227171 - -12.9  -5.69473   TAGATTATAAAAAAA        GAAACCTGACA GCAGTG TGTCAGGTTTC         ATATACTTTTTGCAT 100 17
HC662_RS10935 2226575 .. 2226611 - -11.9   -5.4505   CCCCCTAACAAAAAA    CTAATGGTATTAGTT TCATTAT AACTAACACCATTAG    TTTTTCAAGAGTTTA 100 41
HC662_RS10930 NONE
HC662_RS10925 NONE
HC662_RS10920 NONE
HC662_RS10915 NONE
        csaA 2223279 .. 2223301 - -16.4  -3.76373   GCCTCAATACGCAAA           GACGTTTGCC TTT GGCAAACGTC           TTTTTTATGTTATCC 100 35
HC662_RS10900 NONE
HC662_RS10895 2220634 .. 2220655 -    -8  -3.37513   ATAGTTTAATAGGAA           GGAAAGCC ATTGAA GGCTTCCC            CTACTATGTATGGAT  67 40
HC662_RS10885 2218711 .. 2218736 -  -9.1  -3.45737   TAATCATGATGAGAA         GATGGACAAAG TTTA CTTTGTACATC          TAGGCTCTTCCTAAA  74 256
HC662_RS10875 NONE
HC662_RS10865 2214447 .. 2214459 -  -3.5  -2.90688   CAATCACCCCATATA                TAAAT GCT ATTTA                TAATCACGAATACAT  45 62
HC662_RS10860 2213843 .. 2213862 -  -3.5   -5.2015   TGAATAACAGAAAAA            GACAGCC GAAAAT GACCGTC             TTAAACATCGTGCTA  75 38
HC662_RS10855 NONE
HC662_RS10850 2210888 .. 2210919 -  -8.9  -3.38201   TAATATTTTTAAATA      GAAAAGAACTTGC ATTTGA ACAAGTTCTTTCC       ACATTTCGATTTATT  74 524
HC662_RS10845 NONE
HC662_RS10840 2208070 .. 2208096 -  -5.9  -5.12172   GATCAATAAACAAAA        CAGTG-CCAACT TTTA AGCTGGACACCG         TTTCATTCTCAAATT  80 204
HC662_RS10835 NONE
HC662_RS10830 NONE
HC662_RS10825 NONE
HC662_RS10820 2203844 .. 2203856 -  -2.7  -3.59979   TCGCCCCATCTCAAA                TCCAA TCT TTAGA                ATGTAGGTTATTAAA  49 36
HC662_RS10815 NONE
HC662_RS10810 2202365 .. 2202391 -  -4.6  -4.29472   CAAAGGAAAATTAAA         TTCGATTCTAAA TTA TTTAGAATTAAA         GTCAATGTTTTCAGA  64 384
HC662_RS10785 2199582 .. 2199593 -    -3  -5.30448   AAAGAAACACAAAAA                TGTT ATAT AACA                 TTAAGGAATACATAG  73 119
HC662_RS10780 2197664 .. 2197692 -   -14  -4.89521   ATATTTTAAATAAAA        CAAGTCGACTCA TCACT TGAGCCGACTTG        TTTCTTTATAAGTTT 100 31
HC662_RS10770 NONE
HC662_RS10765 2196499 .. 2196526 -    -5  -3.34501   ATACAACCGTCAGAA        TCTATTTAAAAC TGCT GTTTTATACAGA         TATTTCTTTAAGCCA  54 17
HC662_RS10760 2195615 .. 2195631 -  -8.7   -5.2189   TGAACTATGAAAAAA              GCCAAGG TTT CCTTGAC              CTTTATCTACTATTT 100 61
HC662_RS10755 NONE
HC662_RS10750 NONE
HC662_RS10745 NONE
HC662_RS10740 NONE
HC662_RS10735 2191965 .. 2191975 -    -4  -3.04792   GCAGCATTTTTAACA                 TTCA TAT TGAA                 GGCAAGTCTCCGTTC  47 65
HC662_RS10730 NONE
HC662_RS10725 2190844 .. 2190863 -  -6.5   -4.7254   ATGCGGTATGAAAAA            GAGCATT TAGATT AATGCTC             TTTTTGTTTAAAACA  79 368
HC662_RS10710 NONE
HC662_RS10705 NONE
HC662_RS10700 2189653 .. 2189671 -  -3.9  -5.35815   CACACTAAACAAAAA            GCAG-TCT ATTC AGATCTGC             TCCTTAGTGTTTTCA  79 344
HC662_RS10695 NONE
HC662_RS10690 NONE
HC662_RS10685 NONE
HC662_RS10680 NONE
HC662_RS10675 2186844 .. 2186870 -  -9.6  -5.93809   TTTTTACAAAAAAAA         CTTCCTTTGT AATCAAA ACAAAGGAAG         CAGGATGTTTTTTAG 100 95
HC662_RS10660 2184874 .. 2184895 - -10.3  -3.85817   AGTTCGTTCTATAAA           TTACGAAAG ACAT CTTTCGTAA            TTTGAGGAAAACAAT  83 295
HC662_RS10655 2181547 .. 2181564 -  -8.5  -3.43151   GTAATCATCAACGAA             CGCTATA TTCA TATAGCG              ATGAGCTGAATTGTG  71 157
        xynA 2179551 .. 2179562 -  -4.4  -2.91582   TACCCGAGGCATATA                TTGG GATT CCAA                 CTAAAAGACCGCCGC  49 129
HC662_RS10625 2176786 .. 2176806 -  -8.3  -3.76767   TGAATAACAGAAATA            GACAGCCAA AAG TTGACTGCC            TTATACACCGCATTA  75 38
        ppsA 2172127 .. 2172156 -  -4.9    -4.371   TTCACCATATTAAAA       CCCCCGCCC TTTTCTTTATTG GGGAGGGGG        TTTTTCGTTTTTAAG  67 137
HC662_RS10610 NONE
HC662_RS10605 2168604 .. 2168634 -  -7.7  -5.47399   TTAAGGTTAAAAAAA      GATCGG-CAGATGC ACCA ACATCTAACCGATC       TGCAAGAATAGCTCC 100 239
HC662_RS10590 2165953 .. 2165973 -  -5.4  -5.89921   ACTATAATAAAAAAA            TGCCCC ATAAGTTCA GGGGCA            TTTGGCAATGATTCT 100 39
HC662_RS10585 NONE
HC662_RS10580 2163605 .. 2163616 -  -4.4  -5.08088   AAGGTTTAATAAAAA                CTTC ATTA GAAG                 TGGTTCTTTGCTTAA  75 456
HC662_RS10570 2161281 .. 2161311 -  -9.7  -5.00884   ACCCTTTTTAAAAAA       GTCTTGGTCCTGC GAATG GCAGGGTCAAGAC       TTTTTCAGGTTGAAG  93 145
HC662_RS10550 NONE
HC662_RS10545 NONE
HC662_RS10540 2157065 .. 2157081 -  -2.3  -4.03413   ATTTGCGGATATAAA              GGATT AAGTCAA AATCC              TTTATATAAAGGCGA  55 426
HC662_RS10520 NONE
HC662_RS10510 2152917 .. 2152927 -  -2.6   -5.1861   TTCATTACTAAAAAA                 TAAT ATT ATTA                 TGTAAACCGTAAATA  73 220
HC662_RS10500 2151061 .. 2151090 -  -6.5  -4.41047   ATCCTGTAATGAAAA       TGCTGAACTAAAC TAAT GATTAATCCAGCA        TCATACTTTATTAAT  75 40
HC662_RS10495 2150480 .. 2150499 -  -2.1  -5.51402   AGACACGTAAAAAAA            GGCCAAGT ATTAG ACC-GGCC            TTAACGTTCAATCTT  79 44
HC662_RS10490 2149007 .. 2149021 -  -4.4   -5.1417   CCACAAAAGCAAAAA               TATATT CCG AATATA               ATTACTTTGGAAAAG  79 475
HC662_RS10480 2147352 .. 2147375 -  -8.2  -3.21726   CCTGACAACAGCCAA          GCAGGAAAAA TTAT TTTTCCCCGC           TCAGTTTTAACTTAG  68 12
HC662_RS10475 2146364 .. 2146383 -  -6.4  -5.58454   TTCATACTAAAAAAA            CAGCGG GAAAAGGT CCGCTG             TTTCGTATTTTTCAT  90 37
HC662_RS10465 2142866 .. 2142885 -  -7.1  -4.20696   TGAGGAAGCTTAAAA            CCCCACC GAATAA GATGGGG             TTTTCACGTCATGTA  76 47
HC662_RS10450 NONE
HC662_RS10445 2140536 .. 2140557 -  -7.2  -5.59879   GAGAAACACAAAAAA           GCAGCGGG GACTTT CCTGCTGC            TAAATATATTGATTT  93 54
HC662_RS10440 NONE
HC662_RS10435 NONE
HC662_RS10430 2136425 .. 2136474 - -16.9  -3.66178   CTGCTTAATGGCAAA TTACTGATTAAAAAGGCTC-GCTT AAA AAGCAAAGCCTTTTTAATCAGAAA GAAGGGTAAGCGCTT 100 39
HC662_RS10415 NONE
HC662_RS10410 NONE
HC662_RS10405 2129737 .. 2129756 -   -10  -4.97666   AATACATGATAAAAA            GCGCCCCTG AAA CAGGG-CGC            TTTTTGATTAAGATG  93 33
HC662_RS10385 2126886 .. 2126903 - -11.3  -5.65927   CATTCAAATAAAAAA             GCCTGTC GCAA GACAGGC              TTCTCATTTTTTAGG 100 36
         rtp 2126206 .. 2126233 -  -3.3  -4.68539   ATGAAAAGCAGAAAA        CACCCGATGCA TACTGC TGTGCCGGGTG         TTTGTTTATATTTAA  64 37
        proC NONE
        proB 2124043 .. 2124077 -  -6.5  -5.84381   GTATCAATAAAAAAA    CGAACCCGA-GCTTCT ATAA AGAAGCTTCGGGTTTT     TGCTCTTGTCAGATT 100 39
        gltB NONE
        gltD 2116877 .. 2116904 - -13.6   -5.8187   CATGGAATAAAAAAA        GAAACCGG-CTGA TAT TCAGACCGGTTTC        TTTTATATGATAATC 100 49
HC662_RS10345 2114719 .. 2114743 -  -5.8  -6.01725   AATAAAAAGAAAAAA          CTGTACTC GCTTCAATT GAGTACAG          TTTTTTGTATGCTGA 100 178
HC662_RS10335 2112509 .. 2112529 - -11.3  -5.77988   AGATATACAAAAAAA            GACACAATT TGA AATTGTGTC            CTAGTCCTCATCCTT 100 26
HC662_RS10330 NONE
HC662_RS10325 2111464 .. 2111481 -  -9.1  -5.60689   TTATATAAGAAAAAA             CGCCCTGC AAA GC-GGGCG             TTTTTTTATTTGGCA 100 86
HC662_RS10315 2109198 .. 2109220 -   -15  -5.68438   TTATCAAACAAAAAA           CACCGTTCAA ATG TTGAACGGTG           TGATTCGGGATGCTA 100 38
HC662_RS10310 NONE
        dacB 2106581 .. 2106602 -  -9.5  -5.80248   GAAGACATAAAAAAA           CCTGTCTTC CTTA GAAAACAGG            TCTGACGCTATGATT 100 33
HC662_RS10300 2098559 .. 2098574 -  -3.3  -3.92659   TTTTCAAAAGTTAAA              GATCT TTCACG AGATC               TTCGATGCTAGATAA  55 5
HC662_RS10295 NONE
HC662_RS10290 NONE
HC662_RS10285 2072349 .. 2072361 -  -3.4  -4.21462   ATTCATTAGTGAAAA                CTGA GCATA TCAG                CAATCTCTTGCAGCG  60 3
HC662_RS10280 2068455 .. 2068478 - -13.2  -4.10863   ATACAAAAAGAAAGA          CGGACAGAGA ATGG CCTCTGTCCG           CTAGTCCGCTTTATC 100 36
HC662_RS10275 2067962 .. 2067994 -  -3.5  -5.76237   CAGATAAATAAAAAA      GTCCTGAAGCA TTTTATTCCTC TGCTTTAGGAC      TTTTATCATTTATCA  88 6
HC662_RS10270 2066272 .. 2066290 -  -9.6  -5.40072   CTTTTTTTAAAAAAA             GACGACTT AGA AAGCCGTC             CTACTCATTTCTTAT 100 37
HC662_RS10265 2065523 .. 2065540 -  -7.1  -2.77899   CCTCCTTATGAATTA             GTTAGTT GAAT AACTAAC              TTTTAAAAGTACTAT  60 103
HC662_RS10260 NONE
HC662_RS10255 NONE
HC662_RS10250 NONE
HC662_RS10245 NONE
HC662_RS10240 NONE
HC662_RS10235 NONE
HC662_RS10230 NONE
HC662_RS10225 NONE
HC662_RS10220 2056706 .. 2056725 -  -7.1  -4.74917   AGTAAATATATAAAA            GGAGCGC TTTTTT ACGCTCC             TAAGTCATTGCTTTT  81 39
        nrnB 2055242 .. 2055261 -  -4.2    -3.524   CAGGTACTTATACAA            CGCCGATA ATGA TACTGGCG             ATTGTCGTTATCGCC  53 134
HC662_RS10195 2052768 .. 2052786 -  -8.8  -5.28176   TTCAGGCACAAAAAA             CAGCCGTT CAG AGCGGCTG             TTTTTTTCAAGAGTA 100 47
        fabD NONE
HC662_RS10185 2038833 .. 2038846 -  -3.9  -2.67366   ACAAATAAATAAATG               CTTTT CCCT AAAAG                TTCAATTGAATAGAA  45 19
HC662_RS10180 NONE
HC662_RS10175 2014738 .. 2014763 -  -8.2   -5.4505   CTTTTTAATAAAAAA         TGCCGCTGAC TGCCAG GCCAGCGGCG          TTTTCACTTGATCAT 100 41
HC662_RS10170 NONE
HC662_RS10165 2011512 .. 2011535 -  -8.2  -5.75478   AACGATATAAAAAAA          GCGATTTCCC TCTC AGAAAATCGC           AAATTCAGACATTCT 100 77
HC662_RS10145 2006623 .. 2006645 - -15.6  -5.70522   AACAATAATAAAAAA           CCCGCTCACA TTA TGCGAGCGGG           TTTCGTTTGTTTTTT 100 194
        plsY 2000671 .. 2000681 -  -5.4  -3.95435   TGTGTCAAAAGAGAA                 GGTT TAT AACC                 ATTTCACTTTAGGTT  63 18
HC662_RS10120 2000282 .. 2000302 - -14.1  -5.42259   TCATTTGTAAAAAAA            GAACGCACA TAA TGTGCGTTC            TTTTTTATTGGTATT 100 30
        sspO 1995049 .. 1995061 -  -4.1  -3.00825   GTCATAAAATAGAAC                CTCCT TAA AAGAG                TCCGGTGTTATTGAT  47 33
HC662_RS10075 1994870 .. 1994885 -  -4.7  -5.66684   GAACGCATAAAAAAA              CAGAC ACTAAG GTCTG               CTTTTCTTACATATC  85 32
        cotM 1994381 .. 1994410 -  -9.5  -5.10497   AATGGACGGAAAAAA       GTCACTTTCAT AATAGGGG ATGAAAGTGAC        TTTTTATGTTAGCTG  91 34
HC662_RS10065 1993733 .. 1993754 -  -8.8  -5.33921   AAATGAATTAAAAAA           CCTTTCCT CCTGCC AGGAAAGG            TTTTTTATTTAAGAA 100 30
        ynzD 1991573 .. 1991598 -  -9.2  -4.39828   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCAATCA  86 34
        lexA 1986351 .. 1986376 - -12.6  -3.53444   TTTTTGAACAATTAA         CCCCCTCTCC ATAAAG GAAGAGGGGG          TTGTTTTATGCTTCT  95 55
HC662_RS09995 1984438 .. 1984462 - -10.7   -4.7078   GTAACTACTGAAAAA          TAGGAGGCGAC AAG GCAGCCTCCTA          TTCCTCATGCTTCTC  91 23
HC662_RS09935 1973599 .. 1973627 - -12.7  -4.10657   TTAGACTTTCGAAAA        CAAAAAAGAGAGA TAC TCTCTCTTTTTTA        TTCTTCGACAGCCTT 100 23
       tatAC 1972643 .. 1972661 -  -6.7  -5.56372   AAATCAAAATAAAAA             GGCCGAT TTTTC ATCGACC             AAATCATTTATCCTA  90 38
HC662_RS09920 1972223 .. 1972239 - -10.8  -5.95539   GGTCAAACAAAAAAA              CCCGGC ATTTA GCCGGG              GAAAAAGGAAAACGA 100 58
HC662_RS09915 NONE
HC662_RS09910 1970755 .. 1970774 - -11.4  -4.88258   AAAATGATAAGAAAA            CCGCCTGGC AAT GCC-GGCGG            TCTTTTGTTGCTTTA 100 38
HC662_RS09905 1970155 .. 1970175 - -11.3  -5.37043   ATTTCATATAAAAAA            GATTAGCTT TTG AAGCTAATC            TTTTTTATTAAGAAG 100 20
HC662_RS09890 1966770 .. 1966790 -  -8.9  -6.01725   AACAAAAATAAAAAA            GCCCCGGTA TGT CACCGGGGG            AATAAATAGATGTTT 100 48
HC662_RS09885 1966311 .. 1966331 -  -5.3  -5.72622   TTCATAAATAAAAAA            GCCCCGGTA TGT CACCGAGGG            AATAAATAGATGTTT  95 48
HC662_RS09880 1965524 .. 1965539 -  -6.2  -3.43308   TAGATCAAAAAATTA              CTCAAT GTTT ATTGAG               GTATTACTTTTAAAG  60 7
HC662_RS09840 1955611 .. 1955629 -  -4.6  -3.30658   GCATATGAAAAAGGA             GACTTCTA TTT TAGAACTC             CTTTTTCATAATAGA  52 114
HC662_RS09765 1945375 .. 1945385 -    -4  -2.61728   ATCTGTAATAGGAAG                 CTTT ATT AAAG                 TTATAAAAAAGAAGT  45 95
        cwlC 1932255 .. 1932281 -  -7.9   -5.7946   TCTTGAATAAAAAAA         CCCGGTTTCTC GTGAT GAGGAGCCGGG         TTTTTTATGAACGCT 100 55
HC662_RS09670 1925039 .. 1925058 -  -8.6  -5.38047   CACTGACATAAAAAA            GACCCCTT TTTT AAGAGGTC             TGTTGTGTTTAATAG 100 34
        ebrA NONE
        ebrB 1924235 .. 1924259 - -11.5   -5.4505   CTGGTGAATAAAAAA          CAGACGGTC ACTCACA GACCGTCTG          TTTTTTTTCTTTAGC 100 8
        aprX 1920873 .. 1920916 - -19.2  -4.44277   TATGAAAATTCAAAA CATAAAGCCGGCAACTCTGCT GAG AG-AGATTTGCCGGCTTTATG ATGCTGTCTATTGAC 100 33
HC662_RS09635 NONE
HC662_RS09630 1919495 .. 1919522 - -12.1  -2.75183   AGCTCTATGCAAGCA        GCGCCTTTGAA TGAAAG CTCAAAGGCGC         TAAGCTGTATTATTT  86 56
HC662_RS09620 1918064 .. 1918085 -  -9.5  -4.93595   ACAAAAACTTAAAAA           GCCCTTTTC CAGC GAAAAGGAC            CTTCTTTTTTCATAT  91 40
HC662_RS09615 1917238 .. 1917261 -  -4.6  -3.16154   GAACATGACATTCAA          TCCAAATAGA ATTA TCCTTTTGGA           TGAGCTTGAGCATGA  50 222
HC662_RS09035 1800494 .. 1800518 - -13.5  -5.00895   TTCACCACATAAAAA          CGCCTGCCACA TAT CGGGGCAGGCG          TTCATTTTGTTATAC 100 35
HC662_RS08945 1781024 .. 1781052 - -14.7  -4.56883   GTAAGACGAAAGAAA        TAAGCCAGAGCAT ACA ATGCTCTGGCTTT        TCTTTATGCGGCTCA 100 38
HC662_RS08675 1721644 .. 1721669 -  -5.5  -3.51976   AACGTCTGAAATGAA         CCGGCCCTAT ATTTAGA ATA-GGCCGG         TTGTTTTTATTTCTA  57 38
HC662_RS08655 NONE
HC662_RS08650 1718691 .. 1718722 -   -14  -3.72051   TTGAATAAGCTGAAA      GCAAAAAGCACCTGA TAC TCAGGTGCTTTTT-C      TATAAGTTTAAAAAA 100 25
       spoVV 1715473 .. 1715494 -  -5.9  -3.61591   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  62 20
HC662_RS08590 1710239 .. 1710261 - -12.1   -4.5265   AACGATATCATAAAA           GGTACAGCA AAACA TGCTGTACC           TTTTCATTACATTTG 100 32
HC662_RS08530 NONE
HC662_RS08520 1693519 .. 1693539 -  -5.4   -5.4593   CCAAAATAAGAAAAA            GCTAAAGC GCGAG GCTATAGC            TTAATCATTGGTATT  83 26
HC662_RS08515 1693188 .. 1693224 - -14.8  -3.06073   GACAGTCTGCAAAAT   CATAAAAAGACTCAGCT GAGA AGCTGAGTCTTTTT-TG    TTCTGTATGGTAAAG 100 49
HC662_RS08500 1690624 .. 1690642 -  -7.4  -5.72053   TAATGAAATAAAAAA             CACCGC TTTCTTT GCGGTG             TTTTTTGATTACAAT 100 62
HC662_RS08495 1689761 .. 1689786 - -11.2  -4.53034   CTGATATAAGGAAAA         GCGCTTG-CCG GAAAA CGGACAAGCGC         TTTTTTAGATTAAGC  90 35
        nprE 1684856 .. 1684873 - -11.3  -5.64006   ATGTAACGAAAAAAA             GCCTGAG AGAT CTCAGGC              TTTTTCTAATATTAC 100 37
HC662_RS08465 1684345 .. 1684366 -    -3  -5.61596   ACGGTTATAAAAAAA           GTATGCTT ACTGTG AAGCATTC            CTTTTTTGAACGATT  80 10
HC662_RS08455 1682717 .. 1682737 - -11.9  -4.95155   TCCATACCATAAAAA            GCCTCCCAA AAA TTGAGAGGC            ATCTGTTAAAAAATT 100 39
HC662_RS08435 1680198 .. 1680219 -   -13  -5.12971   AAGATGTAAGAAAAA           GAGCCGGG TGATAT CCCGGCTC            TTTTTTAAGCTTGTG 100 30
        speA 1678238 .. 1678259 - -15.9  -5.63374   TGAAGAGTAAAAAAA           GCATGCGGC TCAA GCCGCATGC            TTTTTATTTATTGAA 100 33
HC662_RS08415 1677292 .. 1677315 - -13.2  -4.86621   ATGCTTAATCAAAAA          CAGCCCTCGCT TAA AGCG-GGGCTG          TTTTTTTATTTTGAC 100 31
HC662_RS08385 1670825 .. 1670848 - -12.5  -3.45366   GGTGCAACGAACGAA          TGACCAGCC GTAGAT GGCTGGTCA           AGTTCATGCTGTGTG  95 42
HC662_RS08380 1670166 .. 1670191 - -16.2   -4.8743   TTTAAAATAAAGAAA         CGGCTGGCAC TGCACT GTGCCAGCCG          CTTTTTCTTTTTAGC 100 36
       rnpZA NONE
HC662_RS08365 1667093 .. 1667116 - -11.1  -5.89921   ATTACAATAAAAAAA          GATGCACTC TCAAGT GAGTGCATC           TTTTTTTAAACCTCC 100 31
       mreBH 1660531 .. 1660543 -  -3.4  -4.67552   GTGAGGAAAAAAGAA                GCAA GAAAT TTGC                TGGATGTGAGATTTT  64 53
HC662_RS08330 1660305 .. 1660325 - -10.5  -4.81249   GGCCAAAGTGAAAAA            CCCAAAACA ACA TGTCTTGGG            TTTTTCGATATTATG  91 36
HC662_RS08325 1658967 .. 1658982 - -10.4  -5.69262   GCAGAAAAATAAAAA              GGAGGC GAAA GCCTCC               TTTTGTTTATTAAAA 100 35
HC662_RS08310 1655894 .. 1655921 -   -12  -5.67711   CAAACAAAATAAAAA        CGCCTTGCTGGCC TTT GGACAGCA-GGCG        TTTTTTAATTTGAAA 100 30
HC662_RS08225 1638378 .. 1638401 -  -7.5   -5.1104   AAACATACAGAAAAA          CTGCTTG-GC GTAGT GCTCAAGCAG          TTTTTTATTGAGTTT  89 30
        mscT 1635183 .. 1635201 - -10.3  -5.50723   TCAGTAAAATAAAAA             CCGAAGC AAAGA GCTTCGG             TTCTTTTATTTATTC 100 35
HC662_RS08135 NONE
HC662_RS08130 1623787 .. 1623801 -  -2.9  -5.10765   AAACAAATAAGAAAA               CATTA CCGGT TAATG               GTGACTCTTGTTCCG  70 13
HC662_RS08125 1622380 .. 1622407 - -12.2  -4.75174   TATTGAATGTAAAAA        TGCGCTTTTTTC TGAG AAAAAAAGCGCA         TTTTTAACGTATATT 100 39
HC662_RS08120 1621786 .. 1621832 - -14.8  -3.06915   ACGTATGTGATTGAA TAAATAAAAACAGCCGGTGCC TGAAGG GGCA-CGGCTGTTTTTATTTT AAAAGTAACTCTCGC 100 24
HC662_RS08110 1620440 .. 1620467 -  -3.5  -5.24129   TCTTTTCAGAAAAAA        GAAGACAACCA GCGATT TGATTGTCTTT         ATTGTATCATGTTCT  75 67
HC662_RS08105 1619120 .. 1619139 -  -9.3  -5.42198   TCCCAAAAAATAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT 100 13
HC662_RS08090 1613803 .. 1613835 - -18.7  -6.14618   TATAAAACAAAAAAA      GCTTGTAGAGAAAAC ATG GTTCTCTCTACAAGC      TGAAGATTATCTGTA 100 60
HC662_RS08070 1607715 .. 1607727 -  -2.6  -4.19276   GTAAAAGTTGCAAAA                GCAG GGTAT CCGC                TAGGCTTTATTGTTG  56 359
HC662_RS08020 1596263 .. 1596275 -  -2.6  -4.19276   GTAAAAGTTGCAAAA                GCAG GGTAT CCGC                TAGGCTTTATTGTTG  56 359
HC662_RS07975 1587097 .. 1587130 - -12.5  -4.09739   TTAAGGCTTTTAAAA     TAAAACCAGCAGTCC AATC GGGCTGCTGGTTTTT      TATGTATCAAGCTTT 100 32
HC662_RS07945 1581373 .. 1581388 - -10.4  -5.08824   TTTTTATGTAAAAAA              GCTGCC GGGC GGCAGC               TTTTGAGAAAGCTAA  93 110
HC662_RS07895 1571789 .. 1571810 - -10.9  -5.31456   TGAATGCATAAAAAA           CGGCTTCCT AAAT AGGAAACCG            CTGATCGTTATTTCG 100 33
        motA NONE
        motB 1569832 .. 1569858 -    -8  -5.39221   ATAATAAGTAAAAAA         GGAAGCCTGATA TGT CACAAGGCTTCC         TTTTTACTATTTTTC 100 32
        kinD 1567654 .. 1567676 - -13.4  -5.55695   CAAGAAGATAAAAAA           CCCTCCTGAC ACG GTCAGGGGGG           TTATGAAGCGGATAC 100 26
HC662_RS07860 1566321 .. 1566342 - -15.9  -4.39133   CAATAAGCAGGAAAA           GCCCCGTTC AATC GAACGGGGC            TTTTTATATTTATTG 100 35
HC662_RS07830 1560677 .. 1560701 - -18.7  -5.01732   AATGGCCGTAAAAAA          GCCTCCTTCTC AGA GAGAAGGAGGC          TTAACATCTATGTCC 100 284
HC662_RS07825 NONE
        mtnA 1558313 .. 1558348 - -11.2  -6.11392   AAACAAACAAAAAAA    CCGCTG-ACTCGGCCCA AAA TGAGCAAAGTGCAGCGG    TTTTTTAGTGAACCT 100 30
HC662_RS07800 1554068 .. 1554126 -  -7.1  -6.47325   AAAAAAGAAAAAAAA CACAAATAAAAAAAGACCTCTTAGGCGA TGTT CCGCTTAAGAGGTGCTTTTCTATTT-TA AATAAGCATTTTTGC 100 18
        htpK 1550294 .. 1550312 -    -8  -4.95547   TGGAGAATAAGAAAA             CCCCGGCC TTT AGCCGGGT             ACTATAGAATGTCAG  86 27
HC662_RS07770 1549963 .. 1549984 - -12.3  -3.20617   AGCTCAAACTGAAGA           TTCGCCGAG TGAC CCCGGCGAA            TAATGACCTGAATTT  87 39
HC662_RS07745 1543505 .. 1543531 -  -7.2  -5.42259   TTATGGGTAAAAAAA         CAGCCGGCAC TGTTATT GCGGCGGCTG         TTCGAGAATTAATTG  91 11
HC662_RS07740 1542535 .. 1542551 -  -4.4  -3.59979   GGGCTGCATCGTAAA              CGCCAT GTGTT ATGACG              TGCCGGAGGCTTTTT  55 18
HC662_RS07735 1540689 .. 1540711 - -12.1  -3.76393   ACAGTTGAACGGAAA           GAGCTGACT TAATT AGTCAGCTC           TTTTTCTGCAACTGA  90 19
HC662_RS07720 1536919 .. 1536943 -  -2.9  -5.86965   ACCTATCAAAAAAAA         GACTGATGCC TTGGTC AGCA-CAGTC          TTTTTTGATTATATC  90 34
HC662_RS07710 1534966 .. 1534980 -  -7.2  -3.41302   GCAAGACCCGAAAGA               TAAACG CTC CGTTTA               CGCGCATTTAACTGA  61 232
        tnrA 1533565 .. 1533588 -  -8.8   -5.1417   TTATAAAAGTAAAAA          GTCCGTCTCA ATTG CGAGTCGGAC           TTTTATCATTTAACG  91 35
HC662_RS07655 NONE
HC662_RS07650 NONE
HC662_RS07645 NONE
HC662_RS07640 1524225 .. 1524245 - -11.9  -5.95946   TCAATAAGAAAAAAA            GCCGCTATC GAC AATAGCGGC            TTTTTATGAGGAAAA 100 29
         isp 1521866 .. 1521891 - -14.1  -5.18726   TTCTCACAATAAAAA         GCCTCTTTCCC ATGA GAGAAAGAGGC          TTTTCTGCGTAAAAC 100 335
        metE 1519468 .. 1519488 - -15.5  -5.47159   TTTTAATAGAAAAAA            CCATCTGCC GAA GGCAGATGG            TTTCTATATTTATAC 100 35
HC662_RS07615 1518199 .. 1518223 - -11.5  -4.33621   CACCGAATTAACAAA          GGATCAGGC CGCACAT GCCTGATCC          TTTTAATATTCTTTC  93 28
HC662_RS07600 1515973 .. 1515998 - -14.1  -3.61106   TGAATAAAATATTAA         GAGGATGCCTC GTAT AAGGCATCCTC          AACTTTTTTGATGAA 100 24
HC662_RS07550 1508530 .. 1508561 - -13.3  -3.10493   GTTTGAACACATACA      TAAAACTCTTCTC CTTTCT GAGAAGAGTTTTA       TTATTGAGATAGAAG  95 62
HC662_RS07535 1505477 .. 1505487 -    -4  -2.50387   CTTGATAAAATAAGC                 TGTT CAA AACA                 TGAAAAAGGGGAATA  44 45
         pgl 1504341 .. 1504360 - -12.2  -5.76237   GAGATAAACAAAAAA            GACTGGCT CCGG AGCCAGTC             TTTGCTTTTATGATT 100 33
        htrA 1492378 .. 1492403 - -16.2  -5.06414   TTTGTCTAATAAAAA         GCCTCAGGCC TTTTGC GGCCTGAGGC          GTTATTTCTTAAGAA 100 34
        steT 1485811 .. 1485833 - -13.5  -5.14563   TGTTTCACCAAAAAA           CGGTTCCCT AAACA AGGGAACCG           TTTTATCAGCTTGTT 100 31
HC662_RS07445 NONE
HC662_RS07440 1483904 .. 1483924 -    -9  -5.52384   GTTTCATCAAAAAAA            CCGCTCCT TTGAC AGAAGCGG            TGTAACCTTAAAAAA 100 33
     spoIISA NONE
HC662_RS07430 1482869 .. 1482893 -  -7.9   -4.0219   TAAGAAAAGGAATAA          GGACAAGAG CTGTTTT CCCTTGTCC          TTTTAGTGTGATCAT  74 37
HC662_RS07425 1482663 .. 1482681 - -14.6   -5.1764   CACAGAACACAAAAA             TCCCGGAG CTG CTCCGGGA             TTTACTTTTTCTTCT 100 27
HC662_RS07240 1455748 .. 1455760 -  -2.6   -5.0065   TAGCGAGAAAGAAAA                GCCC GTATA GGAC                TGGAAAGTGTGTTGA  67 125
HC662_RS07235 1454816 .. 1454847 -    -5  -3.96841   CTGGAAGAAAGAGAA      CGCGATATTGTCGT TCCA ACGACGTTCCCGCG       TGAGCTCGAAAAGCG  61 280
HC662_RS07220 1453035 .. 1453054 -  -9.3   -4.3255   GCTGTAATCAATAAA            CGGAAGC TGCCCC GCTTCCG             TTTTCATCTTACATA  85 34
HC662_RS07210 1451678 .. 1451691 -  -8.1  -5.90231   ATAAAGAGAAAAAAA               GACCC TCCG GGGTC                TTTTTTATTTCAGCT 100 30
HC662_RS07195 1449681 .. 1449699 -  -5.3  -5.64274   GGAGGCACAAAAAAA             GATACCC TAAAC AGGTATC             TTTTTTCTCGTTTCC  86 42
HC662_RS07190 1448690 .. 1448726 - -21.1  -3.36492   GGTGTAACGTTATAA    TGAAGAAGGCTATCCTC CGA GGGGATAGCCTTCTTCA    TTAAATCAGCTTCAA 100 26
HC662_RS07120 1432444 .. 1432469 -  -8.3  -4.91852   GGTAGCAAAAATAAA         GGAGAACAGGC TTTC ACCCATTCTCC          GGCAGATGCTACGCG  90 34
HC662_RS07115 1431597 .. 1431610 -  -5.3  -3.78962   TTAAAGAGAGGGAAA               GGTAA TCCA TTACC                GGGTACCTCCCTTCA  62 21
        fetB 1430814 .. 1430845 - -18.9  -4.42062   TAGGTGTGAAATAAA      GATGAGCCCTTCC TTTTCG GGAAGGGCTCATC       TTTCTGTGTCATCCA 100 34
HC662_RS07075 1423978 .. 1424000 - -17.8   -4.8543   TAACTCTTACAAAAA           GCCGCTTTCC AAG GGAAAGCGGC           TTTTGTATGCCGGCA 100 229
HC662_RS07065 1422763 .. 1422784 - -11.7  -5.57054   AATAAGTCAAAAAAA           CCGAAATCA AGAT TGATTTCGG            TTTTTTTGATTAAAT 100 35
HC662_RS07050 1419666 .. 1419688 - -12.1  -5.52986   ATTTGACTAAAAAAA           GAAAGAGCC AGGAA GGCTCTTTC           TTTGTTATAGCGCAA 100 30
HC662_RS07025 1413859 .. 1413874 -  -8.2   -5.4505   TTGTCCAATAAAAAA              GCGGCC GAGC AGCCGC               ATGATGGTTTTATTT 100 35
HC662_RS07020 1413381 .. 1413399 -  -6.6  -5.37593   TTCCAAATGAAAAAA             GCGTCACA TAT TGCGGCGC             TTTTTGATTCCCAGA  89 10
HC662_RS07010 NONE
HC662_RS07005 1411222 .. 1411232 -  -8.2  -4.64763   TCATTGAAAAAATAA                 GCGG ATA CCGC                 CCGGCACTTGTAAGA  86 372
        cotT 1409602 .. 1409622 -  -4.7  -6.09196   TTTAAAACAAAAAAA           TGGGGAGC TGGACT GC-CCCCA            TTTCGGTAAACGAAG 100 42
        cyoE 1408492 .. 1408513 -  -4.4  -5.63517   TTTCCAAACAAAAAA           GAGTCACA TTGATG TGTGGCTC            TTTTTGCATAACATC  84 39
HC662_RS06985 1407626 .. 1407646 -  -5.4  -5.69793   ATAGTAAATAAAAAA            GCTTAGAC ACCTA GACTAAGC            TTTTTCCGCATCTCT  95 20
HC662_RS06975 1406246 .. 1406263 -  -3.5  -5.28942   GATCGGAAACAAAAA             TTCT-TGG GGA CCAGAGAA             TGGTGAGGAGCATGT  75 228
HC662_RS06970 1405649 .. 1405665 -  -9.4  -4.39407   GCAAATAAGTTAAAA              GCAGGC ATAGA GCCTGC              TTTTTTACATTGAAA  86 30
HC662_RS06915 1393835 .. 1393866 - -10.5  -4.74103   TTTTCAACTTAAAAA      TTATTGAAATCAA GTAATG TTGATTTCAATAA       TTTCAAAGGTGCTGC  91 28
HC662_RS06895 1389816 .. 1389828 -  -4.9  -4.02396   CAAACAAAAGTGAAA                CAATA AGT TATTG                AAAAAAAGAGCCCTT  61 98
HC662_RS06890 NONE
HC662_RS06885 1388549 .. 1388579 - -12.7  -4.04071   AAACAGCAATAAGAA       TAAAACCCCTTCC TATGT GGAAGGGGTTTTT       AAACATGTTCGAATA 100 24
HC662_RS06850 1384842 .. 1384871 -    -3  -5.71712   CTGGATATAAAAAAA       GGAACGGTTCA CAAGAATAT TGAAC-GTTCC       CGTTTGAAAATGAAA  86 290
HC662_RS06830 1381653 .. 1381675 - -12.8  -4.42238   TTATTCTAACCAAAA           GAAGAGCCAA TAT TTGGCCCTTC           TTGATGGTTGGAAAT 100 51
HC662_RS06825 1381135 .. 1381151 - -10.1  -4.43397   TTGGAAAATAAAGAA              GAAGGGG AAT CCCCCTC              CATCTAATTAATCCA  89 29
HC662_RS06800 1377945 .. 1377962 -  -7.1  -3.44321   AGGAAACTGCAAATA             TCCTTTT TATA AAAAGGA              AGAAAACCAATTTCC  66 14
HC662_RS06795 1377311 .. 1377333 - -10.6  -5.00616   CGGTCCGTTAAAAAA           GAAGCCGG CGATAGC CCGGCTTC           TTTTGTTATTCATCA  93 31
HC662_RS06780 1373931 .. 1373943 -  -4.9  -3.18452   CCTGGAAATAAAGTA                TGATA GAA TATCA                AAGCATTTTTTTCAG  52 23
HC662_RS06775 NONE
HC662_RS06770 1372933 .. 1372954 - -10.9  -5.04385   TATATGTGGAAAAAA           TCCGGATCT CAAT AGACCCGGA            TGCTGTTTAGTCCTT  93 32
HC662_RS06760 1370215 .. 1370234 -   -15  -3.88029   ACTTTATAGAAAAGA            CCCGGCAG ATCA CTGCCGGG             CTGTTAGTTATGCAA 100 29
HC662_RS06735 NONE
HC662_RS06730 NONE
HC662_RS06725 1367140 .. 1367159 -  -9.3   -5.4593   GGAAAATAAGAAAAA            GCAGAGC GTTTTA GCTCTGC             TTTTAGATTCTAGAG 100 35
        cotY NONE
        cotZ 1365875 .. 1365901 - -10.1  -5.41359   AATGAAATGAAAAAA         GCTGCCCGGCA GATGT TCCCGGACAGC         TTTTTTACATAGAGA 100 77
        prpE 1355647 .. 1355689 - -18.1    -4.086   CAAGATATGAAAGAA CTGACAAAATCCTAAAACG GTTTA CGTTTTAGGATTTTGTCAT CTTTTCAGCATGATT 100 235
HC662_RS06635 1352101 .. 1352113 -  -6.2  -3.60971   AGCTGAAGCTTGAAA                GCGG GCTTT CCGC                ATTCTGAGTGCCCGT  62 124
HC662_RS06630 1351437 .. 1351459 -  -9.9  -5.41143   CACTTCGCAAAAAAA          CCAGAG-GGC AAGA GCCGCTCTGG           TTACGCGTAATAAGC 100 26
HC662_RS06625 NONE
        spxH 1349883 .. 1349912 -  -7.1  -5.40474   ATCGGCGCAAAAAAA       CAGCCTCAAGCAT ATAC ACGCCTGCGGCTA        TTTTTCACATGATTG  91 23
HC662_RS06615 1349396 .. 1349428 - -10.7  -5.42259   GCAGTCTTAAAAAAA      GAAAGCCTGTGCA GAAATGA TGCACAGGCTTTT      TTAAAACCCTTTAAA 100 26
HC662_RS06590 1344407 .. 1344428 - -13.1  -4.30844   ATCGTATCATCAAAA           GAAGGCTGA GTCA TCAGCCTTC            TTTTATTTTTCAACC 100 28
        trpS 1334372 .. 1334391 -  -9.3  -5.58209   GTAAACTGAAAAAAA            CCGCTCT TTGCAT AGAGCGG             TTTTTTTGATCAGCG 100 35
HC662_RS06495 1324094 .. 1324113 - -10.8  -5.30348   ACCGAATAAGAAAAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT 100 29
HC662_RS06470 1320993 .. 1321016 -  -9.7   -5.5112   GTGATCAAGAAAAAA          CCCAAAACA ATGAAA TGTTTTGGG           TTTTTGGCTTTTAAT 100 36
HC662_RS06400 NONE
HC662_RS06395 NONE
HC662_RS06390 1306292 .. 1306318 - -15.2   -4.0098   TTTGAAGTCAAATAA         GAGGCTATGGCG AAT CGCCATAGCCTT         TTTTTATTGAAGTTT 100 29
HC662_RS06375 1303936 .. 1303988 - -21.9  -3.17075   GCTGTCGGAATTCAA TAAGCAAACAAAAACAGTCAGGAC ATATGA GTC-TGACTGTTTTTGTTTGCTTA TTTTCTTAAAAAGAA 100 23
HC662_RS06350 NONE
HC662_RS06345 NONE
HC662_RS06340 1298679 .. 1298735 - -10.4  -5.35459   ACATACGAGAAAAAA TAGCA-TGGAAAAGGCTCGC-CTGCAGC AGG ACTGCAGAGCGAGCCTTTTTTAGTTCTA GTTTAATTCATCAAC 100 23
HC662_RS06330 1296932 .. 1296950 -  -8.2  -6.04953   AGAGAAATAAAAAAA             GTCCTCTT AAG AAGAAGAC             TTTGTCAGTGATTTT 100 271
HC662_RS06325 1295007 .. 1295031 -   -10  -5.41746   AATGCGGTAAAAAAA          GACCGCCCGA TTGGC TCAGGCAGTC          ATCTAGGTATTAATG 100 35
HC662_RS06320 NONE
HC662_RS06315 1293610 .. 1293632 -  -9.9  -5.24989   TCAGACAGCAAAAAA           CCGAACAGA AAATA CCTGTTCGG           GAAAAAGGAGGGTTA 100 38
HC662_RS06310 1292226 .. 1292276 - -10.4  -4.21275   CTAATCGATGCAAAA GCGGAAAGGTCTCAACCCGTTCGA TTT TCAAATGGGATGCTACCTTTCCTC AGCTGGCTGAAGCCG  87 14
HC662_RS06305 1291132 .. 1291156 - -10.7  -4.78326   CTGCAAATAAAGAAA          TGGCCCAGCTT AAT ATGCTGAGCCA          TCCCACTTGTAGCGA  91 10
HC662_RS06300 1289964 .. 1289992 -    -6   -4.2704   CCGATGACGAATAAA        GAGAAAGCGGCA TACAT TGCCGATTTTTC        TGATGAATTTCTTGT  69 449
HC662_RS06285 NONE
         sat NONE
        cysC 1286135 .. 1286150 -    -9  -5.36965   GAACATGAGAAAAAA              CCCGAT ATTG ATCGGG               TTTTTTTATATGATT 100 31
HC662_RS06265 1284435 .. 1284458 -   -11  -3.80551   GAAACAGGCATTAAA          GCGGCA-GCTG ATA CAGCCCGCCGC          CTGATGTTCTAAGCT  84 45
HC662_RS06255 NONE
HC662_RS06250 1281720 .. 1281741 - -11.6  -5.52384   TTCTTATCAAAAAAA           GCAAGGGC AGTTTA GCCCTTGC            TTTCTCTCTTTTCAT 100 15
HC662_RS06230 1277022 .. 1277045 - -11.7   -5.4251   CTGACATATAAAAAA          CACCCGGCC TTATTG AGCCGGGTG           TTACGCCATACCTTT 100 26
HC662_RS06215 1273510 .. 1273529 - -10.7  -4.97312   AAAAGTAATCAAAAA            GCGGTGC CTAGCT GCACCGC             TTTTTTTATTTGCGC  93 31
HC662_RS06195 1268160 .. 1268176 -  -5.1  -4.67011   AATTTGACTGAAAAA              GCGACAA TTT TTGTTGC              GCTTTTTTATGGAAG  70 47
HC662_RS06190 1267680 .. 1267696 -  -6.5  -4.15854   AAACTGAGCGGAAAA              GCGGC GATGGAT GCCGC              TATCCGCCTGCGTGA  71 214
HC662_RS06185 NONE
HC662_RS06180 1267001 .. 1267012 -  -5.8  -2.80988   TCATATGATTAACGA                CCAG GAGG CTGG                 AGCGGGACCAATGTT  54 7
HC662_RS06175 NONE
       gerPD NONE
HC662_RS06165 NONE
HC662_RS06160 1265491 .. 1265536 -  -3.5  -6.04324   CGAAAAAAGAAAAAA TGACCAAAAAGCAGCC-CTCT CTTTGC AGAGCGGCTGC-TTTTATCCA TTTCCAACCATATCC 100 19
HC662_RS06130 NONE
HC662_RS06125 1252252 .. 1252273 - -10.2  -4.98531   TGTCCAAATGAAAAA           GAGGGTTC TTTTTT GAACCCTC            TCTGTCCTTTATGAC  93 34
HC662_RS06115 NONE
HC662_RS06110 1247945 .. 1247956 -  -5.8  -2.70932   TTGTTTTTCCAATTA                GGCA TTGC TGCC                 GCTGATCGAGCTTTC  54 11
HC662_RS06105 1247693 .. 1247710 - -11.3  -5.63517   TTTTTAAATAAAAAA             CACGCAC TGAG GTGCGTG              TTTTCACGTTTCTTC 100 29
HC662_RS06080 NONE
HC662_RS06075 NONE
HC662_RS06070 1241841 .. 1241861 - -10.5  -5.38549   GCTAAACAAGAAAAA            GCAATCTGA TGT CCAGATTGC            TTTTTTTATGCTTAT 100 37
HC662_RS06060 1240420 .. 1240444 - -11.4  -4.52142   ATTAGAAAATAGAAA          GGAGCTGACC GAACA GGGCAGCTCC          TTCTCCTGCTTTAGG 100 36
HC662_RS06050 1239285 .. 1239304 - -12.2  -5.08088   AATGGGTAATAAAAA            GCCAATCC TTGA GGATTGGC             TTATTCGCTCTGCTT 100 26
HC662_RS06040 1236759 .. 1236778 - -10.8  -4.92363   AAATATTTATAAAAA            CCGTTCAT TAAA ATGAACGG             TTTAATCAAGGTCTA  93 27
       hemAT 1235312 .. 1235331 -   -10  -5.12707   CTAAACGTGAAAAAA            CCGG-CTGC ATG GCAGGCCGG            TTTTTGATGTTTATT  93 36
HC662_RS06030 NONE
HC662_RS06025 NONE
HC662_RS06020 NONE
        phoE 1231425 .. 1231452 - -11.4  -5.09762   TGCGAAGAAATAAAA        GAAAAGACAGGC GAAT GCCTGTCTTTTT         CTTATTTGATAAAGC 100 27
        aprE 1226802 .. 1226827 -  -9.1  -5.38054   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTTTCTATTATT 100 36
HC662_RS05985 1224922 .. 1224959 - -14.4  -3.61517   ATTTTGCCTCAATAA   TATGAAAAAGCGAAGC GGCGGA GCTTCGCTTTTTCATT    TTTAATCCTTTGCTT 100 27
HC662_RS05960 1220484 .. 1220514 - -16.3  -3.89607   TATGAGAAAAATCAA       GAAAATCCCACGC GTGAT GCGCGGGATTTTC       GCTCATTACAAATCG 100 31
        gltT 1218928 .. 1218953 - -18.3  -5.32699   TTAAAGATTAAAAAA         GCCTGCGGGGC AAGA ACCCCGCAGGC          TTTTCATTAACCGGA 100 32
HC662_RS05940 1217051 .. 1217077 -  -8.1  -2.62244   TGTTTCAATAAAAGG        TCCAAGC-AGCA GTAA TGCCCGCTTGGA         AAAATGTGAATGGAA  65 78
HC662_RS05930 1215129 .. 1215154 - -13.5  -4.93365   CTTCATAATGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTATTACATT 100 34
        hmoB 1205599 .. 1205619 -   -14  -4.20367   CCTCCCAATAAATAA            GCTGCCGG ACATG CCGGCAGC            TATTCGACAGCGAAA 100 25
HC662_RS05890 NONE
HC662_RS05885 1203809 .. 1203823 -  -4.2  -3.60865   GATTTCAAAGCAGAA               CCATGG CTG CGATGG               TTGTTACTGAAAGGC  55 0
        sndC 1202509 .. 1202534 - -11.9  -4.14345   GAATAGTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTATAGCATAT  95 30
HC662_RS05860 1198895 .. 1198912 -  -9.9  -6.02919   TCACAAATAAAAAAA             CCTCATC TTAT GATGAGG              CCAGGCGTTTTGCGA 100 15
        trpP 1196998 .. 1197019 - -12.3  -5.00616   TCTTTGTCGAAAAAA           CCTCTCCCG GCAG CGGAAGAGG            TTTTGGGTGACAATT 100 39
HC662_RS05835 1195341 .. 1195377 -    -3   -5.0916   CTGGCAACACAAAAA   GCGCAAGGATTTGTAAC TTTC GATA-AGCTCCTTGCGC    TTTTTGCCGGACAGC  72 144
HC662_RS05825 1194329 .. 1194341 -  -6.9   -2.5763   ATAGAATAAAATGAT                GGGAG ATT CCCCC                TCTCTCTGAACTGTC  59 117
HC662_RS05820 1194105 .. 1194131 - -19.6  -5.72053   TAATCAAACAAAAAA         GCATAGCTGCTG AAA CAGCAGCTATGC         TTTTTTCATATTTAC 100 37
        prsA 1192724 .. 1192751 -   -15    -5.626   TATTGCATAAAAAAA        GCTGTGCA-GCTC AAT GAGCGTGCACAGC        TTTTTTTATTATTTA 100 34
HC662_RS05770 1184538 .. 1184559 -  -2.9  -5.37865   TGAAGAACTAAAAAA           GGTGCTTTC TCTT GAACGCAGC            GCCCAAGAGAAAATG  79 133
        khtS NONE
        khtT 1182804 .. 1182814 -  -5.4  -3.82946   CGACTTCAAATACAA                 GATG ATC CATC                 GGCCGCTCACACGCC  62 32
        khtU 1181569 .. 1181590 - -14.5  -4.15841   TGAGCAAACGACAAA           GCAGCACTG ATCA CAGTGCTGC            TTTTTTTATCCCTGT 100 31
HC662_RS05735 1177494 .. 1177515 - -11.7  -4.49756   GGCTAAACAGCAAAA           TCCCTTCTT GGAA AAGAAGGGA            TTTTTTATTCTTTTT 100 41
HC662_RS05720 NONE
        yheD 1173169 .. 1173192 -  -8.9  -2.59797   CCTGGATAAAGATAG          GCCCGCTTT AACTAA AAAGCGGAC           AGATTACGAAGGCCA  67 29
HC662_RS05710 1172807 .. 1172827 - -11.2  -5.80248   GAAGACATAAAAAAA            GCTTAGCC GTTCA GGCTAAGC            TAGTCATAAATATGA 100 25
HC662_RS05705 1172372 .. 1172394 -   -17  -4.40003   GGTGACAAATATAAA           GAGAGCGCGG AAA CCGCGCCCTC           ATAGCCATATATTGA 100 45
HC662_RS05700 1172179 .. 1172195 -  -2.3  -3.20028   CCTATTATAAAAGGA              TGTTC TCAGTTT GAACA              GCGCGGGAAAGAATA  43 14
HC662_RS05695 1171492 .. 1171513 - -11.7  -4.63542   CATAACGCTCAAAAA           CCCAAAACA ATCG TGTTTTGGG            TTTTTATATGTACTT 100 39
HC662_RS05675 1166744 .. 1166764 -  -9.7  -5.49569   TATGAATATAAAAAA            GCGAGCACA GGG CGTGCTCAC            TTCACGATTAGAACG 100 22
        nhaC 1165247 .. 1165270 - -11.8  -5.71983   TGAAGCATAAAAAAA          GAGC-CCGCTT TGC AAGCGGCGCTC          TTTTTATTTTTTAAC 100 29
HC662_RS05660 1163219 .. 1163243 - -10.8  -5.24129   TTTGGGCATAAAAAA         GTGAGGCCGCA CTTA TGCG-CCTCAC          TTTTTTTATTCGTGA 100 31
HC662_RS05640 NONE
HC662_RS05635 NONE
        crcB 1159089 .. 1159105 -  -6.5  -3.42256   ATCGATTCAAGAAGA              CGTCGAT ACG ATCGGCG              GGCTGATATTGAAAG  59 251
        cueR 1155815 .. 1155841 -  -7.4  -3.51329   TATGTCCAATTAGAA         CCTTCATCCT AGCAATG AGAATGAAGG         TAACACCTCCTGTTA  66 53
HC662_RS05610 1154433 .. 1154478 -  -9.4   -4.6821   AATGTTAAGACAAAA CATAATA-AAAAAGACACCTC AATAA AAGGTGCCTTTTTATATTACG CTTCTTTCGGTTCTC  88 21
HC662_RS05605 1153375 .. 1153403 - -16.1  -5.74122   TATGATATAAAAAAA        GCAGCAGAAGTTC ATT GAACATCTGCTGC        TTTTTGGTGTTTATT 100 36
        sigM NONE
HC662_RS05580 NONE
HC662_RS05575 1148378 .. 1148395 - -11.3  -5.27477   AGTGTAATGAAAAAA             GACGCCT CTTC AGGCGTC              TTTCTTTTAAAAGCC 100 32
HC662_RS05565 1146394 .. 1146415 - -15.9  -3.94634   TATCATTTTAAACAA           CAGGCTCCG TTCC CGGAGCCTG            TTTTGTTTAACAAGA 100 32
        citR 1140174 .. 1140191 - -11.3  -4.00526   AATTTTAGAAGGAAA             CCCGTTC ATTG GAACGGG              TTTTTTTTCATTAGA  86 66
        phoA 1137204 .. 1137227 - -15.4  -5.42259   GTACCTTTAAAAAAA          GAGGATGCAG CGTT CTGCATCCTC           TTTTTTTATTTTCCT 100 31
HC662_RS05520 1134070 .. 1134091 - -14.5   -5.4505   TTTTTCAATAAAAAA           CGTACACCC TGCT GGGTGTACG            TTTTTTATTTACATG 100 34
        nsrR 1133532 .. 1133555 -  -5.4  -5.75478   AAGGACATAAAAAAA          GAAGGAAT CATTTTCT ATTCCTTC           ATTCTTAAAAGCTTC  95 16
HC662_RS05510 1131920 .. 1131944 -  -8.6  -5.26875   GCTCTAAGTAAAAAA          CTGTACAGCC GCTAA GGCCATACAG          TTTCTGTTTTTAGAA 100 35
HC662_RS05500 1131118 .. 1131139 - -15.9  -3.93057   CGCAAAAGCAGGAAA           TCCCGGCGT CTGA ACGCCGGGA            TTTGTTTATGTGAGC 100 31
HC662_RS05425 1115005 .. 1115025 -   -14  -4.67353   CGAGTCACTTAAAAA            GCCGCAGG CTATT CCTGCGGC            TTTTCTTCATGAAAA 100 32
HC662_RS05410 1109988 .. 1110020 -  -7.7   -2.9594   ATTTGAAGAAAACAG      TGCGGCATTGGATAG TAG CTATCCAATGCCTTT      GTTATTAATGAAGTC  64 30
HC662_RS05390 1107792 .. 1107803 -    -3  -4.77719   GAAAAGCCAATAAAA                TCAA CTAC TTGA                 ACCATTATGCAATCC  65 60
HC662_RS05365 1102349 .. 1102362 -  -5.2  -3.87608   CTGACGCAAAAAAAG               CGGG GCTGAA CCCG                AAAAAACACACCATA  61 253
HC662_RS05355 1101076 .. 1101095 - -12.2  -5.30616   TTATCGAAATAAAAA            CTGCAGGT TTGC ACCTGCAG             TTTTGCATATCAATT 100 46
HC662_RS05255 1084053 .. 1084071 -  -8.9  -5.08824   TTTTTATGTAAAAAA             GAACACG TTATT CGTGTTC             TTTTACGTAAGCCAA  91 28
HC662_RS05245 NONE
HC662_RS05240 1083031 .. 1083056 -  -9.7   -5.4505   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 10
HC662_RS05205 1076588 .. 1076605 -  -9.1   -5.9362   TAAAATATAAAAAAA             CCCGCTA TTTA CAGCGGG              TTTTTGCATTTTTAT 100 40
HC662_RS05185 1073066 .. 1073097 - -13.1  -3.83868   GAGCAATAAAAGGAA      GAGACGGTCTCTC GTAAAT GAGAGACCGTCTT       TTTTGTATGACTTTG 100 41
       spo0M 1071458 .. 1071486 -    -6  -3.51329   CAGCGTTAAGTAGAA        GGTGATCTCTGT ATAAG ACAGGGATCATC        TTTTTTTATACCATT  60 478
HC662_RS05085 1013039 .. 1013063 -  -5.8  -5.56264   TTCAAACAGAAAAAA         GCACTTCCACC CGAA GATG-AAGTGC          TTTTTTCTGTTTCAG  89 44
HC662_RS05080 1012612 .. 1012637 -    -9  -5.24291   AAAATGAAAATAAAA         GAGCCATTCC GGCCGG GGAATGGCAC          ATTCCTGCTCTACAC 100 35
HC662_RS05075 1011938 .. 1011958 -  -6.9  -4.62336   AGCCCATGTGAAAAA            CCTGTTG TACCCCG CAACAGG            TTTTTACGTAACCAT  79 40
HC662_RS05070 1010107 .. 1010136 - -11.7  -5.76633   TTATATACAAAAAAA       TCTTATATCCTTC GTTA AAAGGATATAAGA        TTGATGTTCAGCTCA 100 33
         bcp NONE
        perR 1006266 .. 1006304 - -13.4   -3.6834   AAGAAAATGTCCAAA   TAAAATAAGCTGACCG TTTCGTG CGGTCAGCTTATTTTT   AATGGTTCTCTTTTT 100 24
HC662_RS05040 NONE
HC662_RS05035 1002889 .. 1002914 - -11.3  -2.72371   GTTTTCAAAGAACAC         GTTTCGAAGGA ATGA TCCTTCAAAAC          TAAACAAGACAGGGA  78 87
HC662_RS05030 1000087 .. 1000098 -  -5.8     -2.55   GAAGAGCTTAACTTA                CTGG TACA CCAG                 CGGTGCGTCCATCCC  53 13
HC662_RS05025 NONE
HC662_RS05020 NONE
HC662_RS05015 NONE
HC662_RS05010 NONE
HC662_RS05005  999526 ..  999538 -  -4.9  -3.25942   ACCCCTCCACATTAA                GTTTT GAA AAAAC                AGTGCCGGCAAGAGG  54 26
HC662_RS05000 NONE
HC662_RS04995 NONE
HC662_RS04990 NONE
HC662_RS04985  999143 ..  999155 -  -2.7  -3.09933   TCTTAAGGGACTTAA                TACAT CAT ATGCA                GTTGATATAAAATTG  44 41
HC662_RS04980 NONE
HC662_RS04975 NONE
HC662_RS04970  998850 ..  998884 - -13.8  -3.81137   GTTTAAACACGCAAA     CACCAATTCAACTTAC CAA GTAAGTAAAATTGGTG     CCGAGGGCCGGACTT 100 21
HC662_RS04965  998430 ..  998488 - -24.7  -3.16881   CACCGACCTTACTAA TATTATAATGTGCAAAAAAAAGATAGGT TATT ACCTATC-TTTTTTTGCACATTATAATA AACTGAAATATCTTG 100 56
        loaP  996807 ..  996851 -   -24  -5.03994   CCTGACATACAAAAA GTCCCCTTTCCAAGGGAAAAT ATGA ATTTTCCCTTGGAAAGGGG-C TCGTTTACAAGTTTG 100 63
HC662_RS04955 NONE
HC662_RS04950  994355 ..  994376 -  -9.5  -4.11394   ACTTGAGCTTCAAAA           GTTAG-CCGC TTA GCGGTCTAAC           TTATTTAAGATGGCA  82 30
HC662_RS04945  993455 ..  993468 -  -5.3  -3.76379   GAACATTTTATTAAA               TTTCG CATG CGAAA                AAATCAACGTGGCAT  59 185
HC662_RS04800  975964 ..  975992 -   -14   -4.8269   GAGAACCATTAAAAA        TAAGCTGACCGC ACGAA ACGGTCAGCTTA        TTTTATTTGGACATT 100 28
HC662_RS04785  973440 ..  973458 - -10.3   -5.9003   AAATGAATAAAAAAA             CAGGAGC ATAAA GCTCCTG             TTCAGGGTGTCTGAT 100 42
HC662_RS04780  972176 ..  972193 -  -9.1  -5.71712   TTGTATATAAAAAAA             CCCGGCT GTTC AACCGGG              TTACTCTTCTGTTTC 100 26
HC662_RS04750  967468 ..  967483 -  -3.2   -4.0896   AAACGGCCTTCAAAA              GGTTTG CTCG CCAACC               TGTGGGAATTCCCTA  56 340
HC662_RS04740  965474 ..  965497 - -14.6  -5.30189   TATAAGACGAAAAAA          GCCCGGCTCT AAAT AGAGCCGAGC           TTTAATTTTTTCTGA 100 10
HC662_RS04705  959109 ..  959129 - -11.2  -5.49809   TAAAGGGTAAAAAAA            CAGCTGCA GCGCA TGCAGCTG            TTCTTCTTTACCGTT 100 33
HC662_RS04685 NONE
HC662_RS04680 NONE
HC662_RS04675  955196 ..  955220 - -12.2  -5.50499   CGACATGTAAAAAAA          CCCCTGTCTC AAACG GAGACAAGGG          GTTTTTCATTAACGT 100 34
HC662_RS04650  950357 ..  950380 - -15.4  -5.54079   GGAAAAAGCAAAAAA          GACTCCGTCT AACC AGACGGAGTC           TTTTTTTATTTCGCC 100 31
HC662_RS04640  947107 ..  947136 -  -9.3  -5.95539   TGTCAAATAAAAAAA       GCCTG-CTTCCGCA GTT TGCGGATGACAGAC       TTAAGACTTATTCTT 100 33
HC662_RS04635  945018 ..  945029 -    -3  -4.02049   GAAGGAGCAAAAAGA                TGAA TGGA TTCA                 AGCGCTTGAAAAAGT  56 473
HC662_RS04625 NONE
HC662_RS04620  942953 ..  942977 - -12.9  -4.18506   GCAGGGTGAAAACAA          GCGGCAGGA GAGAGGT TCCTGCCGC          ATTTCTTTATTTCTC 100 32
HC662_RS04610 NONE
HC662_RS04605 NONE
HC662_RS04600  938831 ..  938863 -  -2.8  -2.71924   TACTCCTTCTGAAAG     CCTGTTC-CCTTT ATTATAGA AAAGGCGGACAGG      GAACACAACCAATCC  41 46
HC662_RS04595  938143 ..  938160 -  -9.9  -5.43866   CAATTCTCAAAAAAA             GATGAGC CAGT GCTCATC              TTTTTTGTGTGACCC 100 21
        padR  936514 ..  936539 -  -6.7  -2.81547   CCCCCACATTAAGTA         TCGGAGCAGCC AGAA GGCCGCTCCCG          GTCAATCCTTATCTA  57 27
HC662_RS04580  935859 ..  935879 - -15.5  -5.40072   CCGCGCCTAAAAAAA            CATCTGCCC CCG GGGCAGATG            TTTTTCGCAATCAAT 100 36
        corA  914569 ..  914587 -  -6.7   -5.0916   CTGCCAACATAAAAA             GAACAGC TTCAC GCTGTCC             TCATTTAAATATATT  83 26
HC662_RS04475  913614 ..  913635 -  -9.4  -4.44667   CTTTGTAACAAGAAA           GCCCCTCC TTAAAC GGAGAGGC            TTTTCTCATTACTTT  86 34
       yfkAB NONE
        mscC  910390 ..  910410 - -10.5   -5.7827   AAGATAAACAAAAAA            CTGATTCCA ACT CGGAATCAG            TTTTTTTATTTATTG 100 35
HC662_RS04440  907085 ..  907109 - -15.8  -4.49311   ATCATTAGTATAAAA          GCCTCCTGAC GTCAT GTCAGGAGGC          TTTTTGATTAGGAAG 100 33
HC662_RS04420  904812 ..  904835 -   -11  -5.37345   GGCAATGATAAAAAA          GACTCGCCGA GTTT TCGGCCAGTC           TCCATTATTTACGAA 100 30
HC662_RS04415  903406 ..  903424 -   -16  -5.42164   GAGAAATAAGAAAAA             CGGACGCC CGG GGCGTCCG             TTTTTTATTTAATTA 100 34
HC662_RS04405  898214 ..  898233 -  -9.3  -4.78326   GTCTAAATAAAGAAA            GCTGCTC GATAAT GAGCAGC             TCTTTTTTTATGCTT  90 33
        ltaS  888480 ..  888518 - -15.7  -3.53563   AGAGCTGCGGTGAAA  TAA-AAAAAGCAGAGAGG CTAG CCTCTCTGCTTTTTCTTA   TTTATCTTCATCATC 100 23
         map  886183 ..  886196 -  -8.1  -2.92613   GCGGAGGTTAAACCA               TCCGG CAGC CCGGA                ATGTGTTTTACAGTT  67 33
HC662_RS04345  885777 ..  885799 -   -12  -4.34759   GACAATATCAAGAAA           GCCGGGCA GCATATG TGCCCGGC           TCGTGTTTTTATTGT  95 34
HC662_RS04335  885200 ..  885223 -   -11  -5.80817   CTGAATAGAAAAAAA          GCCGCGCA TATCAACG TGCGCGGC           TTTACCATTTTTAAG 100 36
HC662_RS04325  883737 ..  883749 -  -3.3  -2.75963   ATCTGGAGCTGAAAT                GGTAC GGG GTGCC                GATTATTTCTGATAT  44 461
HC662_RS04275  873033 ..  873046 -  -2.4  -2.60598   TAAACACTATAATAG               CATG GCTCAT CATG                TCAATATTTTTTTAG  40 58
        yfmC  871990 ..  872013 -  -9.6  -3.81926   GATTGCAAAAACGAA          GAAGCAAGGA TTTC CCCTCGCTTC           TCATAGTCTTACTTA  79 34
HC662_RS04265 NONE
        yfmE NONE
        yfmF  869116 ..  869134 - -10.3  -5.36441   CCGGCATACAAAAAA             GGAGAGG GGGTT CCTCTCC             TTTTTATCACGCCCG 100 32
HC662_RS04250  867978 ..  867996 - -11.7  -4.33808   CAAACCAACGCAAAA             GGAGGGC AAAAA GCCCTCC             GTGTTTTCATTATCA  93 43
HC662_RS04235  864552 ..  864571 -  -8.5  -5.16237   AATGGCAGTAAAAAA            CCCGCCC TTCAGC AGGCGGG             TTTTCTTCGATTTAA  91 37
HC662_RS04225  863456 ..  863477 - -10.2  -4.09805   TCATTAATAACGAAA           GACACTGC GCAGAT GCAGTGTC            TTTTTTAATCATGGA  85 30
HC662_RS04190  855053 ..  855076 - -14.6  -5.31158   TAAAAAAAGGAAAAA          GCCGGCGGGTG AGG CACC-GCCGGC          TGAAAAGAGATTATT 100 36
HC662_RS04185  854276 ..  854301 -  -9.8  -2.62579   TCTTTAAAAGAAACG         CCGTCAGCATG ATTAG CA-GCTGACGG         TTTGTTCGATATTTA  74 12
HC662_RS04180  852925 ..  852942 - -12.7  -5.52384   GCTGGATTAAAAAAA             CCCTGCC GCAT GGCAGGG              GTTTTTTAGCTATGC 100 31
HC662_RS04140  840996 ..  841021 -  -3.9  -3.17553   CGAAAAACGTGAAGA         GGCAGG-GGGCA AAA TGCCCTCCTGTT         TTCTTTCAAAAAAAT  48 102
        yetL  834948 ..  834969 - -14.5  -5.72622   GTCATAAAGAAAAAA           CAGCCGGAT ACGT ATCCGGCTG            CAGAAGAAAAGACGC 100 69
HC662_RS04090  831271 ..  831289 - -10.3  -5.82172   AGTAACATAAAAAAA             TCAGCCG GAAAA CGGCTGA             TTGTCGATTAATACG 100 33
HC662_RS04085  830814 ..  830832 -  -8.8  -2.83396   GTCAAAGGAAGAGCA             CGGCGG AATAGAA CCGCCG             CCGCATCGTTATTCT  68 34
        hmoA  830389 ..  830411 - -12.1  -5.06451   CATGACCGCAAAAAA           GAGCTTGCA GCTGG TGCAAGCTC           TTTTTGTTATTCGTG 100 32
HC662_RS03895 NONE
HC662_RS03890  790609 ..  790626 -  -8.4  -4.43283   TGAGATAAATATAAA             GCCCTC AAGTAA GAGGGC              TTATATTTATTAAGC  83 137
HC662_RS03885  790161 ..  790180 -  -2.1  -5.45726   GAGACCGCAAAAAAA            TTTTCGG TGCAGT CCGCAAA             AGGGAGGTTAGATGT  75 107
HC662_RS03875  788744 ..  788764 -  -9.7  -4.03995   TTCCTCAGAAAAAGA            GACGCAGCC AAA AACTGCGTC            TTGTCCTTAACCAAG  85 32
HC662_RS03850  780750 ..  780767 - -12.7   -5.4756   AACGCTAATAAAAAA             GCAGCCC GCAG GGGCTGC              TTTTTTGATGGTCAA 100 37
        opuE  775613 ..  775635 - -14.2  -4.44461   AACAAGGGCACAAAA           GCCACCAAGC TGT GCTTGATGGC           TTTTTGATTACTTTT 100 33
HC662_RS03825  774811 ..  774836 - -13.4  -4.24948   CGATGACAGCGAAAA         GCCAATGGGA TTCATG TCCCATTGGC          TTTTATAATGTATCA 100 28
HC662_RS03820  773323 ..  773341 - -11.7   -5.7946   TCCTTAACAAAAAAA             CTCCGGC GGCGA GCCGGAG             TTTTTTTATTTTTGT 100 31
HC662_RS03720  721432 ..  721462 - -11.9  -4.56978   CTTCGAAATAACAAA      GAACCGCCC-TGCC GTTC GGCAAGGGCGGTTT       CTTTATGAAACAAAT 100 28
HC662_RS03700  717949 ..  717973 -  -8.7  -4.91511   ATGTCATGAGAAAAA          GCTTGATCA TGTTTTG TGATCAAGC          TTTTCCGTTTATCTG  91 34
HC662_RS03690  716094 ..  716131 -   -10  -5.26119   TGCCCAAAAATAAAA   TGTAGAAAACCCGCAG ATTAAG CTGCGGGTTTTTTATA    CAAAAGCGGGGTGGT 100 21
HC662_RS03555  690445 ..  690455 -  -3.2  -3.41587   TTTGAGAAAATCGAA                 CGTC ATA GACA                 TAGCATATATACATT  47 343
        gabP  680149 ..  680172 -   -14  -5.14949   AAGAAAATAACAAAA          TCCTAAACGG CAGA CCGTTTAGGA           TTTAATCAGCATTAA 100 37
        cotA  678465 ..  678483 -  -8.9  -5.72622   TTCATAAAGAAAAAA             CTTGCCT GCAAG AGGCAAG             TTTGTCGGGTTATTT 100 35
HC662_RS03510 NONE
HC662_RS03505 NONE
HC662_RS03500  675911 ..  675932 - -10.1  -5.20534   ATCAACTAATAAAAA           CCACTCGGC ATGG GCTGAGTGG            TTTTTTAATGGACGA 100 377
HC662_RS03455  663192 ..  663203 -  -4.4  -4.57837   AGATTTGCTTAAAAA                CCTA GACA TAGG                 TGAAGATAAATTAGA  69 320
HC662_RS03405 NONE
HC662_RS03400  654152 ..  654174 - -13.6  -5.64873   GGCAATAATAAAAAA           TCCATTTCTC ATT GAGAAATGGA           TTTTCTTTATTTCTG 100 32
HC662_RS03375  649939 ..  649958 - -12.2  -4.82901   TTCTGTGGATAAAAA            GCACCTCT AAAA AGAGGTGC             TTGACTTTTTTAAGA 100 35
HC662_RS03310  639239 ..  639264 - -14.1  -3.17763   GTCACACTTTATGAA         GGTGCCCAAGA ATTT TCTTGAGCACC          TTCATACCCTAATCA  95 38
        pbuE  630472 ..  630491 - -10.8  -5.69473   TACATCATAAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTCTG 100 14
        phoB  626009 ..  626033 - -10.8  -2.57003   CCATTAATAAGAGAG          CCCGTTACTT CATAC AAGCAACGGG          ACACCTTGTATTCTT  78 41
HC662_RS03230  625241 ..  625267 - -19.6  -4.91357   AAACAGATAAGAAAA         GAACTCCCGTAC CTG GTACGGGAGTTC         ATCATTTAAAACTTG 100 31
HC662_RS03210  620820 ..  620836 - -10.9  -5.80003   CCAATAAATAAAAAA              CCTGACA ATA TGTCAGG              TTTTTTTGTCTTATT 100 39
HC662_RS03190  617655 ..  617679 -  -5.7  -4.84527   TGCACATATGAAAAA          CCTCCCAGC GATTTAA ACTGAGAGG          TTGTTTGTCACCCTT  74 33
HC662_RS03185 NONE
HC662_RS03180  616428 ..  616460 - -15.8  -4.18018   CGGCTTTATTTAAAA     CAAAGAGCCC-GGAA AATA TTCCTGGGCTCTTTG      TTTTATTTCCATTCT 100 28
HC662_RS03155  611100 ..  611121 -   -13  -5.60993   TTTCTCATAAAAAAA           GCGGCTCC ATTTAG GGAGCCGC            TTTTTCTTATGCCAT 100 32
HC662_RS03150  609540 ..  609566 - -11.7  -5.52384   TTTTCATCAAAAAAA        CTCCTGCTCTCA TTTC TGAG-GCAGGAG         CTGCGAATCTTATTG 100 35
        vmlR  607589 ..  607613 - -14.4   -4.6902   CGATAACTTGAAAAA          TACCAAGGGC GAACA GCCCTTGGTA          TCTCTTAATCGTTAT 100 37
HC662_RS03120  603188 ..  603203 -  -8.2  -4.54727   CTTTTCAAATGAAAA              GCCCCC TTTA AGGGGC               TTTTTGTCATAGAAA  86 51
        mneP  599103 ..  599122 - -10.8  -5.60689   GCATACAATAAAAAA            GCTCCTTT ATGA AAAGGAGC             TTTTTTTATTCTTCA 100 31
HC662_RS03090  598112 ..  598130 -  -5.3  -5.13354   TGCATAAAAAATAAA             CCCTCTA GTTAG TAGAGAG             TCAAGGGATATTGAC  78 57
HC662_RS03085  597337 ..  597356 -  -7.9  -4.91109   TGTGTAGTAGAAAAA            GCAGATC TTTCAT GATCTGC             TTTTTTGTTTAATAT  86 50
HC662_RS03065 NONE
HC662_RS03060  592521 ..  592536 -  -3.2  -3.35679   CTCTTTGACTCATAA              GGCAAG ACTC CTTTCC               TTAAGATACTTAGAT  48 97
HC662_RS03055  592038 ..  592071 -  -3.9  -4.42974   CTCACATATAATAAA     GAAGGAGTGGGAT TCGATAAT ATCTTACTCCTTC      TTTTTATGTTTAAGT  64 35
HC662_RS03045  590564 ..  590584 -  -8.3  -3.69447   TCACTAAAAAAGAGA            CCAAGCC TGATGAT GGCTTGG            TTTTGAAAAGGTAAA  73 46
HC662_RS03035  588010 ..  588037 - -11.5   -3.9279   ACTTAAGCTTATAAA        GAAGATACCAA ACCATA TTGGTATCTTC         TCTTTATTTGTGTCT  90 29
HC662_RS03030 NONE
HC662_RS03025 NONE
HC662_RS03015  584177 ..  584199 -  -9.2  -4.13561   TTGTTCTAAAAAAGA           GAGAAGAGAT AAG AACTCTTCTC           AATATCTGAATAAGC  82 62
HC662_RS02985 NONE
HC662_RS02980  577102 ..  577123 - -10.9  -4.06502   TACTTGCAAAGTAAA           CAGGCCTCT AAAG AGAGACCTG            TTTTTTAAAATTAAT  86 36
HC662_RS02965  574409 ..  574459 - -13.6  -4.13421   AAGAAAACAGAAGAA TCCACCAAAAATAAGCCCTCAG CTTGTTT CTGACTGCTTATTTTTGGTGAA AGACTTATTTCTCTG 100 30
HC662_RS02955  573130 ..  573155 -  -9.1   -4.1347   CCTCAATCATAGAAA         TACCAAGGG TTTATACG CCCTTGGTA          TTTTTGTTTATTTAC  79 106
HC662_RS02945  571360 ..  571376 -  -2.4  -2.95538   CTCCTAATAAAATAT              TTTTAT TTAGT ATAAAA              TTCCTCTCATTGGGA  42 71
HC662_RS02940  570723 ..  570743 - -15.5  -4.02253   GCAATAACGCAGAAA            GCCCGCTTT TCT AAAGCGGGC            TTATTCAAATACTAA 100 48
HC662_RS02925  567323 ..  567347 - -10.1  -2.77899   CGTCCGCATGAATGA          TACCAAGGG GTGCAGA CCCTTGGTA          TTTTTTATGCCTTCA  74 113
HC662_RS02920  566509 ..  566528 -  -4.3  -4.74518   AATTATTAAAATAAA            TAACCGA ACTTAA TCGGTCA             TTCAATTTTGTTTAC  71 27
HC662_RS02915  565223 ..  565262 -   -13  -4.46976   ATTAACAAATAGAAA  GAGACTAAGGCTGTCGAAA TCA TTTCGGCAGCCTT-GACTC  TGTTGTTTGATCAAC 100 264
HC662_RS02905  563480 ..  563499 -    -5  -5.60864   TACAGATGAAAAAAA            GACCAAGC CATT ACTTGATC             CAGTTATTATATTTC  85 333
HC662_RS02895 NONE
HC662_RS02890  560804 ..  560825 -  -7.4  -4.56978   TGTCTAAACAAGAAA           CATACCAA ATGATA TTGGTATG            TTTTTAAATTTCACC  79 66
HC662_RS02875  557813 ..  557833 - -12.6  -4.59773   GCTGACGTTGAAAAA            GGAAGGGG TTAGC CCCCTTCC            TTAAAGAACCTTTAG 100 37
HC662_RS02870  556872 ..  556884 -    -2  -3.09193   ATGATATTTATGCAA                TACA TGATC TGTA                ATTAACCTTAACAGA  43 33
HC662_RS02840 NONE
HC662_RS02835  548865 ..  548899 - -13.8  -4.10657   TTATATTCTTGAAAA     CCAAAACCATACCAAA ACT CTTGGTATGGTTTTTG     TGTTGTAATTATTCA 100 74
HC662_RS02755  535376 ..  535397 -  -8.1  -5.63517   TGTGCAAATAAAAAA           GAATCTCTA GTTA TAGAGACTC            TTAATGCTTAGATAG 100 56
HC662_RS02745  533777 ..  533790 -  -5.3  -3.05384   CCTCTTGGCATTGAA               CAAAC AACC GTTTG                TTCCTGCCTACCGGC  53 308
HC662_RS02705 NONE
HC662_RS02700 NONE
HC662_RS02695  527125 ..  527150 -  -6.2  -3.65046   GCCGCATCCCAATAA         TACCAAGGGT TTAACC ACCTTTGGTA          TTATTTTTTTGTGAG  62 90
        cmpA  525602 ..  525621 -  -6.4  -5.09259   TATGGTAAAATAAAA            GCACTGCT TACG AGCAGTGT             TTTTTCCTATAGAAA  83 13
HC662_RS02575  514092 ..  514112 -    -9  -4.81551   TACTCATATGAAAAA           GCGGACGGT TAAT ACCG-CCGC            TCTTTTTTTTGCACA  88 13
HC662_RS02545  507021 ..  507048 -  -9.3  -5.20781   GAGGATAAAATAAAA        CATGAACACGA TGTCAC TCATGTTCATG         TTCATGTAGAGCCCG 100 69
        fbpA NONE
        fbpB  505644 ..  505657 -  -8.1  -5.53991   GAGTCATGAAAAAAA               GAGCC TTTC GGCTC                TTTTTATGTATTGTT 100 29
HC662_RS02480 NONE
HC662_RS02475  493740 ..  493762 -   -15  -4.59089   GAAGGCATAAACAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTGTTTTTACTCG 100 34
HC662_RS02450  490962 ..  490975 -  -3.9  -3.86897   CTCACCTCTCATAAA               TGATT TATC AATCA                ATAACCGCTTATGCC  55 70
HC662_RS02445  490641 ..  490667 - -12.4   -4.9725   AGTCCCATATAAAAA         GACATCGTTTCA GTT CGAAACGATGCC         TCCTATATCAAATGA 100 43
HC662_RS02440  489157 ..  489172 - -10.4   -5.1417   CCACAAAATCAAAAA              CCGGCT TAGC AGCCGG               CTTTTTCTAACGAAA  93 32
HC662_RS02435  488518 ..  488539 - -12.3  -5.44119   GTTATTCTAAAAAAA           CAGGGGCCT GAAA AAGCCCCTG            TTTTTGTGTTGGAAA 100 294
HC662_RS02380  473505 ..  473527 - -13.5  -4.44667   GGTTTTAATAAGAAA           GGCTGGATC ATAAA GATCCAGCC           TTTTTCGCACTTACT 100 40
HC662_RS02350  468903 ..  468930 - -21.4  -5.04385   TACATTCGTAAAAAA        GAAGCCCGCCAC TTAT GTGGCGGGCTTC         TTTGCAGTTGCACAG 100 10
HC662_RS02325  461033 ..  461053 -  -6.8    -5.252   CAGTTTCATAAAAAA            CGCGCC TCATGACAG GGCGCG            TTTTTTATGTGTGAT  88 425
HC662_RS02265  452552 ..  452564 -  -3.3  -3.73756   GACGGCATCAAAACA                CGCGA CAT TGGCG                GACAAAGCACAACAG  54 82
        ycnK NONE
        ycnJ NONE
HC662_RS02225  444873 ..  444899 - -11.6  -5.63517   CGGTTAAACAAAAAA         GCGACCCAGACA TGA CATCTGGATCGC         TTTTTTGATTAGGCA 100 34
        gabR  438765 ..  438780 -  -6.1  -3.33696   CCGCTGGTGAATCAA              TCCCC TGTACC GGGGA               TTTTTTTATGCCTGT  58 6
HC662_RS02190 NONE
        nfsA  437219 ..  437243 - -17.9  -3.80893   ACCGGACAATCGAAA          GGCCTGCCGGA AAA TCCGACAGGCC          GGGTGAGACTTATTT 100 35
HC662_RS02180  436227 ..  436237 -    -4  -2.57354   CTAAGTAATTAACAG                 TGTT TTT AACA                 TCGAAACGGGCTGTG  45 0
HC662_RS02175  434738 ..  434762 - -12.2  -5.13016   AAGTAAAACCAAAAA         GAGCCTCCGCT AAAA AGCGG-GGCTC          TTTTTTTATGATCAG 100 37
HC662_RS02150  429330 ..  429347 - -14.1  -6.02914   GTGATATAAAAAAAA             GCGGGCG CTGC CGCCCGC              TTTTTATGTACATGA 100 29
HC662_RS02145  429007 ..  429041 - -12.3  -3.14404   AGAGGAATGACGTAA    GAACCAGCCCCTTCTC ATTA GAGAAGGGG-TGTTTC     TTTTTTAATCAGCGC  87 85
HC662_RS02120 NONE
HC662_RS02115  423027 ..  423068 - -11.1  -5.84381   TCAGGAAGAAAAAAA CAATAAAAAGAGCGGGGG GATGCAG CCGCCGCTCTTTTTAT-G TTCACTTCTATATAA 100 92
HC662_RS02095  418313 ..  418327 -  -4.4  -3.48772   ATCAAAAACAATACA               TTTAAA AAT TTTAAA               AATTATCCGATTTAC  53 386
HC662_RS02085  415126 ..  415152 - -13.1  -6.02919   GGACAAATAAAAAAA        CAGCCCGCG-AT CAAA ATCCGCGGGCTG         TTTCTTATTATAAGA 100 33
        bsdA NONE
        tcyA NONE
        tcyB NONE
        tcyC  408106 ..  408123 - -12.7   -5.7946   GGCTCAACAAAAAAA             CAGGGCG CTGA CGCCCTG              TTTTTCTTTTTACAA 100 35
HC662_RS02035  407347 ..  407363 - -10.9  -5.86976   GGAGAAAATAAAAAA              CAAAGCC GGG GGCTTTG              TTTTAATGTAAGGGC 100 28
HC662_RS02030  406458 ..  406473 -  -4.7  -5.07107   CAAAGGCTGAAAAAA              CAAGG GGTTCT CCTTG               AGGCGATAGACCGTC  78 142
HC662_RS02020 NONE
HC662_RS02015  403585 ..  403599 - -11.4  -6.11243   ATTTAATAAAAAAAA               GAGGGG ACA CCCCTC               TTTTTAAGATTGCAA 100 29
        hxlA NONE
        hxlB  373705 ..  373725 -   -14  -5.12916   TAGAAAATAATAAAA            CCGGCCTG ATCTA CAGGCCGG            TTGTGTGACGCTATT 100 36
HC662_RS01970 NONE
HC662_RS01965 NONE
         nin  370818 ..  370843 -  -9.8  -3.56262   GAAAGTTTATAAAGA         GTCCCTGAGAG TCACT CTCTCAGGG-C         TTTTTCATTACACAG  80 33
HC662_RS01940 NONE
HC662_RS01935  366384 ..  366403 -   -10  -6.15536   AATCAATAAAAAAAA            GCCGTCTCC TGC GGAG-CGGC            TTTTTTTAATGAAAC 100 47
HC662_RS01905 NONE
        nasC  356443 ..  356453 -  -2.6  -4.66264   GAAAAGTTCTAAAAA                 TTTT ATG AAAA                 ATTAAATAGGTTTGA  62 27
        nasD NONE
        nirD  353537 ..  353557 - -12.7  -3.93769   ACTGTAAAAAATGAA            GGATCACTT GAA AAGTGATCC            GGTCTTTTGATCAAT 100 36
        cobA  352028 ..  352048 - -11.2  -4.99043   GGTGCATAAATAAAA            CAGCCCTT GAGAA AAGGGCTG            CTTGCAATCAGCTGT  93 33
HC662_RS01875  349887 ..  349906 -  -3.6  -3.94438   CAGCTGAAGAAAAGA            TGATTGTG CTGT CACAATAA             AACCTCCGCTCATGT  57 117
HC662_RS01870  349004 ..  349018 -  -2.8  -3.23216   TCCCATCAGCACCAA               TAGACG AAA CATCCA               ATCACCCCTTTACCA  46 27
HC662_RS01865  348132 ..  348155 - -12.6  -5.63012   AAAAAGAAATAAAAA          GAAACCAGTA CTTG TACTGGTTTC           GTCTTCACTTAAAAT 100 34
HC662_RS01825  338758 ..  338776 -   -16  -4.75174   CAGCCAATGTAAAAA             GCCGTGCG GTG CGCACGGC             TTTTTTTATCGTTTT 100 31
HC662_RS01815  337294 ..  337312 -   -16  -4.46742   AAATAAATGAAGAAA             GCCCGCTC TGA GAGCGGGC             TTTTGTCATGTGCAG 100 46
HC662_RS01800  333883 ..  333910 -  -9.8  -4.89233   CATCAAGATGAAAAA        GAGTGGCCGGAA GACA TTCCGGCCGATC         CCGAGCATTATAAAT 100 380
HC662_RS01780  330582 ..  330606 -   -13  -5.15969   TTGTAATCGAAAAAA          GCAGTACATG TCAGC CATGTACTGC          TTTTTTGTTAATTTG 100 33
HC662_RS01750  322163 ..  322182 - -13.6  -4.42287   GAAATAATGAAGAAA            GCAGCCTG TAGC CAGGCTGC             TTTTTTTATTTGTTA 100 38
HC662_RS01730  318568 ..  318582 -  -4.2  -4.61868   TATGTATAGAGAAAA               CCCTTT TTT AGAGGG               TTTCCAAAAAGCCTG  68 18
HC662_RS01725  317316 ..  317335 -  -9.3   -4.4261   GCTTGAATAGGAAAA            GCACCTC GTGAAT GAGGTGC             TTTTTTACATTTGCA  86 30
HC662_RS01685  309232 ..  309255 -   -14  -4.44797   CCAGTAACATGAAAA          GCAGTTTTCC ACAG GGAAAACTGC           TTTTTTTATAAGAAC 100 31
        cwlK  301745 ..  301756 -  -2.2  -3.73068   TGCTCAACGGAAGAA                TGCC AGGA GACA                 GCGCTTCAATTTTTG  50 434
HC662_RS01635 NONE
HC662_RS01630  297771 ..  297795 - -15.9  -5.36441   TTTTCACATAAAAAA          GGAAATAGCCT TGG AGGCTATTTCC          TTTTGGGGTTTTATT 100 36
        natR NONE
HC662_RS01605  292953 ..  292977 - -15.9  -5.32944   CTCATAATGAAAAAA          CCTTGAAAAGC CGA GCTTTTCAAGG          TTTTTTTATTTCTGA 100 31
HC662_RS01580 NONE
      lmr(B)  286959 ..  286982 - -12.4  -5.56264   TGTAAACATAAAAAA          GCCCCTGAAC ACAA GGTCAGGGGC           TTTTCATATTAATGA 100 34
         pcp  285099 ..  285125 -    -8  -2.80796   GCTGACGAGCGAAAC        GGCGGC-CGCT TAATGC AGCGTACCGCC         TGGTGATTTCACATC  62 8
HC662_RS01525  278987 ..  279009 - -15.6   -4.4727   CCAATATTCATAAAA           GGCCGATGCT GCC AGCACCGGCC           TTTCTACTATGAATC 100 32
HC662_RS01445 NONE
HC662_RS01440  259943 ..  259969 - -10.9  -4.59653   AACGAAAAAGAGAAA         GGTGTTCAGCC CGTAT GTCTGAACACC         CTTTTTTTATGATAT  90 32
        mmuM  258828 ..  258852 -  -9.4   -5.4505   CTTCCTAATAAAAAA          TCTCATGTCA GCGAG TGACACGAGA          CTCCGGCGTACCGGC 100 74
        mmuP  257343 ..  257364 - -14.5  -4.87626   TTTGAAGATGAAAAA           GAACCTGCC CGGA GGCAGGTTC            TTTTTATTTTGAATG 100 29
        nagB NONE
HC662_RS01405  252135 ..  252155 -  -9.7  -4.57073   TATGTTGGCGAAAAA            GTCCCCC GCAGCAG GGGGGAC            TTTTTTACTTCATGT  89 30
HC662_RS01400  250739 ..  250762 - -11.1  -4.34263   GCTGAATAATAGAAA          GAACACCTC GGGAAT GAGGTGTTC           TTTTTTTCTACACGC  88 33
HC662_RS01340 NONE
HC662_RS01335  238978 ..  238992 -  -4.2  -4.00066   TGGAGAAGGGATAAA               GAGAAG GAG CATCTC               TGGTTTTGTATTACT  59 119
        glpT  234856 ..  234868 -  -4.7  -3.53012   TGTTTCTTTCTTAAA                CGTGC TCA GCCCG                TTTTCCTGTATTCCA  56 8
HC662_RS01310  233844 ..  233867 - -12.6   -5.3321   AATCAATAAGAAAAA          GCTTAGAATC CTAG GATTCTAAGC           TTTTTTGTAGTCTTT 100 20
HC662_RS01295  229815 ..  229837 -  -9.9  -5.38497   AGTTAAATCAAAAAA           GCTCCCTTC TTTAT GAAGAGAGC           TTTTTTGTTTACTTC 100 34
      blaOXA  227415 ..  227426 -  -4.4  -4.07568   CGTCGTCCGTCAAAA                TGGA GCCA TCCA                 TGTGTACCATCACGG  61 173
HC662_RS01260  223071 ..  223088 - -12.7  -5.93252   GCTAAAAATAAAAAA             GAGCCGG ATAA CCGGCTC              GGTATAAGTTAAAAC 100 34
HC662_RS01255  222093 ..  222110 -  -4.7  -2.69977   ATATCGCAGACATTA             CCGCAGC TACA GCAGCAG              CTCAGGCAAAAGAAG  47 144
HC662_RS01175 NONE
HC662_RS01110  197337 ..  197374 -  -2.7  -4.29119   GACTATAAGAAATAA   TGAAGAATCAG-CTGTTC CCC GAGCGGCCCGATTCTTCG   CCGTCCTTTATCAAG  58 471
        murQ NONE
HC662_RS01095 NONE
HC662_RS01090 NONE
       pbp4b  192624 ..  192636 -  -6.3  -2.56011   TAAGCGGAAAGACAG                GTTTC ATA GAAAC                TTCCTCCTATCGTTG  53 47
HC662_RS01080 NONE
HC662_RS01075  189410 ..  189431 - -10.3  -3.01712   TTTTGTTCGGTAAGA           GTATGTTAC ACGT GTAACATAC            GATGCTTACGTCTTA  77 38
HC662_RS01070  187643 ..  187670 -  -2.9  -3.42083   TGAACAGATATAACA        CCATGGACAAAT TCCAT ATTTAT-CATGG        ACTATCACCGGATAG  47 20
        feuA NONE
HC662_RS01060 NONE
HC662_RS01055 NONE
HC662_RS01050  183842 ..  183861 -  -9.3   -5.5943   AAAGCATGAAAAAAA            CCGCTCA ATCCTG TGAGCGG             TTTTTTCCGTATAGC 100 10
HC662_RS01020  176337 ..  176355 - -14.6  -4.32201   CCAAGCAAGGTAAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTTGTTTTATA 100 36
        pdaB  159421 ..  159436 -  -3.2  -3.22777   CTTGAGATATTAAGA              TCCTCA TCAT TGTGGA               ATTTGCTTCAGTTAT  45 362
        gerD  158474 ..  158506 -  -9.8  -4.98255   GTGCAAGTATAAAAA      GGGCGAACCGGGAT TCTAT ATCCCGGTCTTCCC      TTTATTCACTTTCTT  93 27
        abrB   44748 ..   44771 -  -9.7  -5.84381   TCAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTAAAAGAA 100 45
HC662_RS00120 NONE
HC662_RS00115   23801 ..   23825 -  -7.2  -5.52384   CCCCCATGAAAAAAA          GACGTTTCCA AATTA TCGAAACGTC          TTTTTGACAATATTA  93 13
HC662_RS00110 NONE
HC662_RS00105   22423 ..   22444 - -11.7  -4.94972   TATTATAATGAAAAA           GTGAATCTC AGTT GAGATTCAC            TTTTTTTGATTTTCA 100 22
