B4069_RS00020	SM00422	helix_turn_helix, mercury resistance
B4069_RS00030	SM00382	ATPases associated with a variety of cellular activities
B4069_RS00035	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B4069_RS00110	SM00493	B4069_RS00110
B4069_RS00120	SM00382	ATPases associated with a variety of cellular activities
B4069_RS00135	SM00257	Lysin motif
B4069_RS00135	SM00636	B4069_RS00135
B4069_RS00170	SM00936	Penicillin-binding protein 5, C-terminal domain 
B4069_RS00175	SM00116	Domain in cystathionine beta-synthase and other proteins.
B4069_RS00175	SM01240	B4069_RS00175
B4069_RS00200	SM00852	Probable molybdopterin binding domain
B4069_RS00220	SM00382	ATPases associated with a variety of cellular activities
B4069_RS00225	SM00382	ATPases associated with a variety of cellular activities
B4069_RS00240	SM00382	ATPases associated with a variety of cellular activities
B4069_RS00245	SM01066	Carbohydrate binding domain
B4069_RS00250	SM00420	helix_turn_helix, Deoxyribose operon repressor
B4069_RS00250	SM01134	B4069_RS00250
B4069_RS00275	SM00382	ATPases associated with a variety of cellular activities
B4069_RS00300	SM00966	SpoVT / AbrB like domain 
B4069_RS00305	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
B4069_RS00305	SM00091	PAS domain
B4069_RS00305	SM00387	Histidine kinase-like ATPases
B4069_RS00305	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS00325	SM00849	Metallo-beta-lactamase superfamily
B4069_RS00360	SM00861	Transketolase, pyrimidine binding domain
B4069_RS00450	SM00838	Elongation factor G C-terminus
B4069_RS00470	SM00670	Large family of predicted nucleotide-binding domains
B4069_RS00495	SM00878	Biotin carboxylase C-terminal domain
B4069_RS00540	SM00116	Domain in cystathionine beta-synthase and other proteins.
B4069_RS00590	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B4069_RS00650	SM00740	B4069_RS00650
B4069_RS00660	SM00740	B4069_RS00660
B4069_RS00725	SM00842	Cell division protein FtsA
B4069_RS00730	SM00864	Tubulin/FtsZ family, GTPase domain
B4069_RS00730	SM00865	Tubulin/FtsZ family, C-terminal domain
B4069_RS00755	SM00382	ATPases associated with a variety of cellular activities
B4069_RS00790	SM00363	S4 RNA-binding domain
B4069_RS00815	SM00363	S4 RNA-binding domain
B4069_RS00840	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
B4069_RS00845	SM00851	MGS-like domain
B4069_RS00845	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
B4069_RS00845	SM01209	B4069_RS00845
B4069_RS00860	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
B4069_RS00915	SM00831	Cation transporter/ATPase, N-terminus
B4069_RS00930	SM00072	Guanylate kinase homologues.
B4069_RS00935	SM01409	B4069_RS00935
B4069_RS00945	SM00487	DEAD-like helicases superfamily
B4069_RS00945	SM00490	helicase superfamily c-terminal domain
B4069_RS00970	SM00331	Sigma factor PP2C-like phosphatases
B4069_RS00970	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
B4069_RS00975	SM00220	Serine/Threonine protein kinases, catalytic domain
B4069_RS00975	SM00740	B4069_RS00975
B4069_RS00990	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
B4069_RS01010	SM01120	B4069_RS01010
B4069_RS01010	SM01121	B4069_RS01010
B4069_RS01025	SM00487	DEAD-like helicases superfamily
B4069_RS01025	SM00490	helicase superfamily c-terminal domain
B4069_RS01040	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
B4069_RS01045	SM00822	B4069_RS01045
B4069_RS01055	SM00358	Double-stranded RNA binding motif
B4069_RS01055	SM00535	Ribonuclease III family
B4069_RS01060	SM00968	SMC proteins Flexible Hinge Domain
B4069_RS01065	SM00382	ATPases associated with a variety of cellular activities
B4069_RS01065	SM00962	SRP54-type protein, GTPase domain
B4069_RS01065	SM00963	SRP54-type protein, helical bundle domain
B4069_RS01080	SM00382	ATPases associated with a variety of cellular activities
B4069_RS01080	SM00962	SRP54-type protein, GTPase domain
B4069_RS01080	SM00963	SRP54-type protein, helical bundle domain
B4069_RS01140	SM00881	CoA binding domain
B4069_RS01150	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
B4069_RS01150	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
B4069_RS01150	SM00493	B4069_RS01150
B4069_RS01170	SM00382	ATPases associated with a variety of cellular activities
B4069_RS01170	SM01086	C-terminal, D2-small domain, of ClpB protein
B4069_RS01210	SM00382	ATPases associated with a variety of cellular activities
B4069_RS01260	SM00448	cheY-homologous receiver domain
B4069_RS01295	SM00962	SRP54-type protein, GTPase domain
B4069_RS01305	SM00448	cheY-homologous receiver domain
B4069_RS01310	SM00073	Histidine Phosphotransfer domain
B4069_RS01310	SM00260	Two component signalling adaptor domain
B4069_RS01310	SM00387	Histidine kinase-like ATPases
B4069_RS01310	SM01231	B4069_RS01310
B4069_RS01315	SM00260	Two component signalling adaptor domain
B4069_RS01375	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B4069_RS01385	SM00479	B4069_RS01385
B4069_RS01385	SM00481	DNA polymerase alpha chain like domain
B4069_RS01395	SM00316	Ribosomal protein S1-like RNA-binding domain
B4069_RS01395	SM00322	K homology RNA-binding domain
B4069_RS01430	SM00904	Riboflavin kinase
B4069_RS01435	SM01387	B4069_RS01435
B4069_RS01440	SM00316	Ribosomal protein S1-like RNA-binding domain
B4069_RS01440	SM00322	K homology RNA-binding domain
B4069_RS01475	SM00859	Semialdehyde dehydrogenase, NAD binding domain
B4069_RS01485	SM01130	B4069_RS01485
B4069_RS01490	SM00849	Metallo-beta-lactamase superfamily
B4069_RS01505	SM00382	ATPases associated with a variety of cellular activities
B4069_RS01505	SM00843	B4069_RS01505
B4069_RS01510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS01510	SM00866	B4069_RS01510
B4069_RS01545	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS01555	SM00852	Probable molybdopterin binding domain
B4069_RS01560	SM00382	ATPases associated with a variety of cellular activities
B4069_RS01570	SM00322	K homology RNA-binding domain
B4069_RS01570	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B4069_RS01585	SM00829	Enoylreductase
B4069_RS01595	SM00729	Elongator protein 3, MiaB family, Radical SAM
B4069_RS01610	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
B4069_RS01610	SM00534	ATPase domain of DNA mismatch repair MUTS family
B4069_RS01615	SM00853	MutL C terminal dimerisation domain
B4069_RS01615	SM01340	B4069_RS01615
B4069_RS01645	SM00849	Metallo-beta-lactamase superfamily
B4069_RS01730	SM00646	B4069_RS01730
B4069_RS01745	SM00860	SMI1 / KNR4 family
B4069_RS01750	SM00318	Staphylococcal nuclease homologues
B4069_RS01750	SM00894	Excalibur calcium-binding domain
B4069_RS01760	SM00860	SMI1 / KNR4 family
B4069_RS01775	SM00860	SMI1 / KNR4 family
B4069_RS01815	SM00382	ATPases associated with a variety of cellular activities
B4069_RS01845	SM00644	B4069_RS01845
B4069_RS02055	SM00465	GIY-YIG type nucleases (URI domain)
B4069_RS02065	SM00966	SpoVT / AbrB like domain 
B4069_RS02080	SM01208	B4069_RS02080
B4069_RS02085	SM00493	B4069_RS02085
B4069_RS02090	SM00650	Ribosomal RNA adenine dimethylases
B4069_RS02140	SM01400	B4069_RS02140
B4069_RS02160	SM00487	DEAD-like helicases superfamily
B4069_RS02160	SM00490	helicase superfamily c-terminal domain
B4069_RS02160	SM00982	B4069_RS02160
B4069_RS02160	SM01058	CarD-like/TRCF domain
B4069_RS02165	SM00966	SpoVT / AbrB like domain 
B4069_RS02180	SM00363	S4 RNA-binding domain
B4069_RS02200	SM00316	Ribosomal protein S1-like RNA-binding domain
B4069_RS02215	SM00860	SMI1 / KNR4 family
B4069_RS02220	SM00860	SMI1 / KNR4 family
B4069_RS02230	SM00860	SMI1 / KNR4 family
B4069_RS02250	SM00342	helix_turn_helix, arabinose operon control protein
B4069_RS02265	SM00849	Metallo-beta-lactamase superfamily
B4069_RS02270	SM00871	Bacterial transcription activator, effector binding domain
B4069_RS02285	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B4069_RS02325	SM00421	helix_turn_helix, Lux Regulon
B4069_RS02325	SM00448	cheY-homologous receiver domain
B4069_RS02330	SM00257	Lysin motif
B4069_RS02335	SM00341	Helicase and RNase D C-terminal
B4069_RS02335	SM00487	DEAD-like helicases superfamily
B4069_RS02335	SM00490	helicase superfamily c-terminal domain
B4069_RS02335	SM00956	B4069_RS02335
B4069_RS02420	SM00861	Transketolase, pyrimidine binding domain
B4069_RS02425	SM00327	von Willebrand factor (vWF) type A domain
B4069_RS02430	SM00382	ATPases associated with a variety of cellular activities
B4069_RS02440	SM00257	Lysin motif
B4069_RS02525	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
B4069_RS02525	SM00091	PAS domain
B4069_RS02540	SM00450	Rhodanese Homology Domain
B4069_RS02565	SM00354	helix_turn _helix lactose operon repressor
B4069_RS02595	SM00729	Elongator protein 3, MiaB family, Radical SAM
B4069_RS02595	SM00876	Biotin and Thiamin Synthesis associated domain
B4069_RS02620	SM00342	helix_turn_helix, arabinose operon control protein
B4069_RS02670	SM00363	S4 RNA-binding domain
B4069_RS02675	SM00420	helix_turn_helix, Deoxyribose operon repressor
B4069_RS02680	SM00382	ATPases associated with a variety of cellular activities
B4069_RS02715	SM00046	Diacylglycerol kinase catalytic domain (presumed)
B4069_RS02720	SM00642	Alpha-amylase domain
B4069_RS02740	SM00849	Metallo-beta-lactamase superfamily
B4069_RS02745	SM00919	Malic enzyme, NAD binding domain
B4069_RS02745	SM01274	B4069_RS02745
B4069_RS02780	SM00382	ATPases associated with a variety of cellular activities
B4069_RS02780	SM00843	B4069_RS02780
B4069_RS02805	SM00830	Chorismate mutase type II
B4069_RS02810	SM00354	helix_turn _helix lactose operon repressor
B4069_RS02830	SM00116	Domain in cystathionine beta-synthase and other proteins.
B4069_RS02845	SM00363	S4 RNA-binding domain
B4069_RS02855	SM00363	S4 RNA-binding domain
B4069_RS02855	SM01390	B4069_RS02855
B4069_RS02860	SM00267	diguanylate cyclase
B4069_RS02870	SM00014	Acid phosphatase homologues
B4069_RS02875	SM00938	Nitrogen regulatory protein P-II
B4069_RS02915	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS02940	SM00028	Tetratricopeptide repeats
B4069_RS02955	SM00387	Histidine kinase-like ATPases
B4069_RS02980	SM00420	helix_turn_helix, Deoxyribose operon repressor
B4069_RS02980	SM01134	B4069_RS02980
B4069_RS02990	SM00487	DEAD-like helicases superfamily
B4069_RS02990	SM00490	helicase superfamily c-terminal domain
B4069_RS03020	SM00984	UDP binding domain
B4069_RS03080	SM00344	helix_turn_helix ASNC type
B4069_RS03095	SM00903	Flavin reductase like domain
B4069_RS03150	SM00287	Bacterial SH3 domain homologues
B4069_RS03165	SM00382	ATPases associated with a variety of cellular activities
B4069_RS03180	SM00354	helix_turn _helix lactose operon repressor
B4069_RS03195	SM00854	Bacterial capsule synthesis protein PGA_cap
B4069_RS03285	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS03330	SM00382	ATPases associated with a variety of cellular activities
B4069_RS03335	SM00421	helix_turn_helix, Lux Regulon
B4069_RS03335	SM00448	cheY-homologous receiver domain
B4069_RS03340	SM00387	Histidine kinase-like ATPases
B4069_RS03360	SM00342	helix_turn_helix, arabinose operon control protein
B4069_RS03375	SM00382	ATPases associated with a variety of cellular activities
B4069_RS03380	SM00382	ATPases associated with a variety of cellular activities
B4069_RS03430	SM00382	ATPases associated with a variety of cellular activities
B4069_RS03445	SM00861	Transketolase, pyrimidine binding domain
B4069_RS03480	SM00478	endonuclease III
B4069_RS03550	SM00226	Low molecular weight phosphatase family
B4069_RS03580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS03580	SM00866	B4069_RS03580
B4069_RS03585	SM00642	Alpha-amylase domain
B4069_RS03650	SM00849	Metallo-beta-lactamase superfamily
B4069_RS03670	SM00448	cheY-homologous receiver domain
B4069_RS03675	SM00387	Histidine kinase-like ATPases
B4069_RS03685	SM00656	B4069_RS03685
B4069_RS03715	SM00382	ATPases associated with a variety of cellular activities
B4069_RS03720	SM00829	Enoylreductase
B4069_RS03730	SM00487	DEAD-like helicases superfamily
B4069_RS03730	SM00490	helicase superfamily c-terminal domain
B4069_RS03735	SM00382	ATPases associated with a variety of cellular activities
B4069_RS03800	SM00028	Tetratricopeptide repeats
B4069_RS03885	SM00382	ATPases associated with a variety of cellular activities
B4069_RS03895	SM00835	Cupin
B4069_RS03925	SM00829	Enoylreductase
B4069_RS03945	SM00354	helix_turn _helix lactose operon repressor
B4069_RS03955	SM00858	B4069_RS03955
B4069_RS03970	SM00382	ATPases associated with a variety of cellular activities
B4069_RS03975	SM00028	Tetratricopeptide repeats
B4069_RS03990	SM00257	Lysin motif
B4069_RS03990	SM00644	B4069_RS03990
B4069_RS04015	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS04030	SM00382	ATPases associated with a variety of cellular activities
B4069_RS04135	SM00257	Lysin motif
B4069_RS04200	SM00257	Lysin motif
B4069_RS04200	SM00644	B4069_RS04200
B4069_RS04250	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B4069_RS04275	SM00382	ATPases associated with a variety of cellular activities
B4069_RS04290	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
B4069_RS04300	SM00382	ATPases associated with a variety of cellular activities
B4069_RS04360	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
B4069_RS04375	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS04395	SM00855	Phosphoglycerate mutase family
B4069_RS04420	SM00382	ATPases associated with a variety of cellular activities
B4069_RS04435	SM00448	cheY-homologous receiver domain
B4069_RS04435	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS04440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS04440	SM00387	Histidine kinase-like ATPases
B4069_RS04440	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS04470	SM00116	Domain in cystathionine beta-synthase and other proteins.
B4069_RS04470	SM00924	MgtE intracellular N domain
B4069_RS04475	SM00422	helix_turn_helix, mercury resistance
B4069_RS04490	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS04525	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
B4069_RS04590	SM00091	PAS domain
B4069_RS04590	SM00387	Histidine kinase-like ATPases
B4069_RS04590	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS04635	SM01007	Class II Aldolase and Adducin N-terminal domain
B4069_RS04660	SM00387	Histidine kinase-like ATPases
B4069_RS04660	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS04665	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS04680	SM00382	ATPases associated with a variety of cellular activities
B4069_RS04680	SM01086	C-terminal, D2-small domain, of ClpB protein
B4069_RS04715	SM00822	B4069_RS04715
B4069_RS04720	SM00257	Lysin motif
B4069_RS04725	SM00257	Lysin motif
B4069_RS04730	SM00636	B4069_RS04730
B4069_RS04795	SM01061	CAT RNA binding domain
B4069_RS04830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B4069_RS04830	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS04860	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS04870	SM00905	Dihydroneopterin aldolase
B4069_RS04915	SM00382	ATPases associated with a variety of cellular activities
B4069_RS04925	SM00977	TilS substrate C-terminal domain
B4069_RS04930	SM00220	Serine/Threonine protein kinases, catalytic domain
B4069_RS04940	SM00331	Sigma factor PP2C-like phosphatases
B4069_RS04940	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
B4069_RS04985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS04985	SM00866	B4069_RS04985
B4069_RS05020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B4069_RS05040	SM00098	Alkaline phosphatase homologues
B4069_RS05055	SM00257	Lysin motif
B4069_RS05055	SM00636	B4069_RS05055
B4069_RS05060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS05060	SM00895	B4069_RS05060
B4069_RS05075	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS05075	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B4069_RS05090	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS05205	SM00422	helix_turn_helix, mercury resistance
B4069_RS05205	SM00871	Bacterial transcription activator, effector binding domain
B4069_RS05220	SM00421	helix_turn_helix, Lux Regulon
B4069_RS05220	SM00448	cheY-homologous receiver domain
B4069_RS05225	SM00387	Histidine kinase-like ATPases
B4069_RS05245	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B4069_RS05255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS05270	SM00226	Low molecular weight phosphatase family
B4069_RS05280	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B4069_RS05305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS05345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS05350	SM00342	helix_turn_helix, arabinose operon control protein
B4069_RS05350	SM00871	Bacterial transcription activator, effector binding domain
B4069_RS05360	SM00342	helix_turn_helix, arabinose operon control protein
B4069_RS05370	SM01058	CarD-like/TRCF domain
B4069_RS05375	SM00357	Cold shock protein domain
B4069_RS05390	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS05400	SM00788	Adenylosuccinate synthetase
B4069_RS05410	SM00382	ATPases associated with a variety of cellular activities
B4069_RS05450	SM00267	diguanylate cyclase
B4069_RS05475	SM01131	B4069_RS05475
B4069_RS05495	SM00422	helix_turn_helix, mercury resistance
B4069_RS05535	SM00849	Metallo-beta-lactamase superfamily
B4069_RS05540	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS05585	SM01266	B4069_RS05585
B4069_RS05595	SM00354	helix_turn _helix lactose operon repressor
B4069_RS05625	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B4069_RS05645	SM00470	ParB-like nuclease domain
B4069_RS05660	SM00470	ParB-like nuclease domain
B4069_RS05670	SM01228	B4069_RS05670
B4069_RS05680	SM00322	K homology RNA-binding domain
B4069_RS05680	SM00393	Putative single-stranded nucleic acids-binding domain
B4069_RS05680	SM01245	B4069_RS05680
B4069_RS05700	SM00382	ATPases associated with a variety of cellular activities
B4069_RS05700	SM00760	Bacterial dnaA protein helix-turn-helix domain
B4069_RS05705	SM00480	DNA polymerase III beta subunit
B4069_RS05725	SM00387	Histidine kinase-like ATPases
B4069_RS05725	SM00433	TopoisomeraseII
B4069_RS05730	SM00434	DNA Topoisomerase IV
B4069_RS05765	SM00957	SecA DEAD-like domain
B4069_RS05765	SM00958	SecA preprotein cross-linking domain
B4069_RS05770	SM00937	B4069_RS05770
B4069_RS05785	SM00382	ATPases associated with a variety of cellular activities
B4069_RS05795	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B4069_RS05795	SM00245	tail specific protease
B4069_RS05805	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B4069_RS05830	SM00487	DEAD-like helicases superfamily
B4069_RS05830	SM00490	helicase superfamily c-terminal domain
B4069_RS05835	SM00382	ATPases associated with a variety of cellular activities
B4069_RS05880	SM00047	Lysozyme subfamily 2
B4069_RS05880	SM00287	Bacterial SH3 domain homologues
B4069_RS05920	SM00382	ATPases associated with a variety of cellular activities
B4069_RS05975	SM00646	B4069_RS05975
B4069_RS05995	SM00984	UDP binding domain
B4069_RS06035	SM00387	Histidine kinase-like ATPases
B4069_RS06040	SM00421	helix_turn_helix, Lux Regulon
B4069_RS06040	SM00448	cheY-homologous receiver domain
B4069_RS06050	SM00487	DEAD-like helicases superfamily
B4069_RS06050	SM00490	helicase superfamily c-terminal domain
B4069_RS06110	SM00155	Phospholipase D. Active site motifs.
B4069_RS06170	SM00882	Coenzyme A transferase
B4069_RS06175	SM00882	Coenzyme A transferase
B4069_RS06215	SM00421	helix_turn_helix, Lux Regulon
B4069_RS06215	SM00448	cheY-homologous receiver domain
B4069_RS06220	SM00387	Histidine kinase-like ATPases
B4069_RS06255	SM00382	ATPases associated with a variety of cellular activities
B4069_RS06290	SM00382	ATPases associated with a variety of cellular activities
B4069_RS06295	SM00382	ATPases associated with a variety of cellular activities
B4069_RS06330	SM00382	ATPases associated with a variety of cellular activities
B4069_RS06345	SM01060	B4069_RS06345
B4069_RS06430	SM00954	Region found in RelA / SpoT proteins
B4069_RS06445	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS06455	SM00363	S4 RNA-binding domain
B4069_RS06460	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS06475	SM01061	CAT RNA binding domain
B4069_RS06505	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
B4069_RS06655	SM01061	CAT RNA binding domain
B4069_RS06670	SM00640	Glycosyl hydrolases family 32
B4069_RS06705	SM00986	Uracil DNA glycosylase superfamily
B4069_RS06705	SM00987	UreE urease accessory protein, C-terminal domain 
B4069_RS06760	SM00858	B4069_RS06760
B4069_RS06895	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B4069_RS06920	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
B4069_RS06925	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS06970	SM00028	Tetratricopeptide repeats
B4069_RS07020	SM00729	Elongator protein 3, MiaB family, Radical SAM
B4069_RS07035	SM00836	DALR anticodon binding domain
B4069_RS07035	SM01016	Arginyl tRNA synthetase N terminal dom
B4069_RS07045	SM00100	Cyclic nucleotide-monophosphate binding domain
B4069_RS07045	SM00419	helix_turn_helix, cAMP Regulatory protein
B4069_RS07060	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B4069_RS07085	SM00155	Phospholipase D. Active site motifs.
B4069_RS07110	SM00155	Phospholipase D. Active site motifs.
B4069_RS07135	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
B4069_RS07165	SM00981	B4069_RS07165
B4069_RS07225	SM00852	Probable molybdopterin binding domain
B4069_RS07250	SM00849	Metallo-beta-lactamase superfamily
B4069_RS07265	SM00062	Bacterial periplasmic substrate-binding proteins
B4069_RS07270	SM00062	Bacterial periplasmic substrate-binding proteins
B4069_RS07285	SM00382	ATPases associated with a variety of cellular activities
B4069_RS07305	SM00904	Riboflavin kinase
B4069_RS07325	SM00116	Domain in cystathionine beta-synthase and other proteins.
B4069_RS07355	SM00481	DNA polymerase alpha chain like domain
B4069_RS07360	SM00919	Malic enzyme, NAD binding domain
B4069_RS07360	SM01274	B4069_RS07360
B4069_RS07405	SM01329	B4069_RS07405
B4069_RS07415	SM00448	cheY-homologous receiver domain
B4069_RS07415	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS07420	SM00091	PAS domain
B4069_RS07420	SM00387	Histidine kinase-like ATPases
B4069_RS07420	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS07425	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
B4069_RS07425	SM00474	3'-5' exonuclease
B4069_RS07425	SM00475	5'-3' exonuclease
B4069_RS07425	SM00482	DNA polymerase A domain
B4069_RS07430	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
B4069_RS07430	SM01232	B4069_RS07430
B4069_RS07465	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
B4069_RS07485	SM00382	ATPases associated with a variety of cellular activities
B4069_RS07500	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
B4069_RS07510	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
B4069_RS07510	SM00387	Histidine kinase-like ATPases
B4069_RS07515	SM00448	cheY-homologous receiver domain
B4069_RS07515	SM00850	LytTr DNA-binding domain
B4069_RS07580	SM01007	Class II Aldolase and Adducin N-terminal domain
B4069_RS07610	SM00813	Alpha-L-arabinofuranosidase C-terminus
B4069_RS07650	SM00967	RNA 2'-O ribose methyltransferase substrate binding
B4069_RS07665	SM00873	B3/4 domain
B4069_RS07665	SM00874	tRNA synthetase B5 domain
B4069_RS07665	SM00896	Ferredoxin-fold anticodon binding domain
B4069_RS07685	SM00278	Helix-hairpin-helix DNA-binding motif class 1
B4069_RS07685	SM00481	DNA polymerase alpha chain like domain
B4069_RS07685	SM00483	DNA polymerase X family
B4069_RS07690	SM00463	Small MutS-related domain
B4069_RS07690	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
B4069_RS07690	SM00534	ATPase domain of DNA mismatch repair MUTS family
B4069_RS07715	SM00893	Electron transfer flavoprotein domain
B4069_RS07720	SM00893	Electron transfer flavoprotein domain
B4069_RS07725	SM00813	Alpha-L-arabinofuranosidase C-terminus
B4069_RS07735	SM00465	GIY-YIG type nucleases (URI domain)
B4069_RS07775	SM00421	helix_turn_helix, Lux Regulon
B4069_RS07795	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS07805	SM00857	Resolvase, N terminal domain
B4069_RS07820	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS07825	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS07880	SM00382	ATPases associated with a variety of cellular activities
B4069_RS08045	SM00257	Lysin motif
B4069_RS08105	SM00644	B4069_RS08105
B4069_RS08120	SM00860	SMI1 / KNR4 family
B4069_RS08125	SM00860	SMI1 / KNR4 family
B4069_RS08135	SM01240	B4069_RS08135
B4069_RS08140	SM00316	Ribosomal protein S1-like RNA-binding domain
B4069_RS08180	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
B4069_RS08200	SM00257	Lysin motif
B4069_RS08210	SM00487	DEAD-like helicases superfamily
B4069_RS08210	SM00490	helicase superfamily c-terminal domain
B4069_RS08255	SM00091	PAS domain
B4069_RS08255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS08255	SM00387	Histidine kinase-like ATPases
B4069_RS08255	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS08260	SM00448	cheY-homologous receiver domain
B4069_RS08260	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS08280	SM00363	S4 RNA-binding domain
B4069_RS08295	SM00936	Penicillin-binding protein 5, C-terminal domain 
B4069_RS08440	SM00387	Histidine kinase-like ATPases
B4069_RS08450	SM00936	Penicillin-binding protein 5, C-terminal domain 
B4069_RS08490	SM00919	Malic enzyme, NAD binding domain
B4069_RS08490	SM01274	B4069_RS08490
B4069_RS08505	SM00870	B4069_RS08505
B4069_RS08510	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS08615	SM00849	Metallo-beta-lactamase superfamily
B4069_RS08690	SM00460	Transglutaminase/protease-like homologues
B4069_RS08735	SM01001	AIR carboxylase
B4069_RS08745	SM00998	Adenylosuccinate lyase C-terminus
B4069_RS08760	SM01211	B4069_RS08760
B4069_RS08785	SM00798	AICARFT/IMPCHase bienzyme
B4069_RS08785	SM00851	MGS-like domain
B4069_RS08790	SM01209	B4069_RS08790
B4069_RS08790	SM01210	B4069_RS08790
B4069_RS08795	SM00344	helix_turn_helix ASNC type
B4069_RS08845	SM00278	Helix-hairpin-helix DNA-binding motif class 1
B4069_RS08845	SM00292	breast cancer carboxy-terminal domain
B4069_RS08845	SM00532	Ligase N family
B4069_RS08880	SM00845	GatB domain
B4069_RS08895	SM00046	Diacylglycerol kinase catalytic domain (presumed)
B4069_RS08910	SM00028	Tetratricopeptide repeats
B4069_RS08940	SM00028	Tetratricopeptide repeats
B4069_RS08995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS08995	SM00387	Histidine kinase-like ATPases
B4069_RS09000	SM00342	helix_turn_helix, arabinose operon control protein
B4069_RS09000	SM00448	cheY-homologous receiver domain
B4069_RS09025	SM00342	helix_turn_helix, arabinose operon control protein
B4069_RS09130	SM00894	Excalibur calcium-binding domain
B4069_RS09145	SM00226	Low molecular weight phosphatase family
B4069_RS09185	SM00937	B4069_RS09185
B4069_RS09205	SM00919	Malic enzyme, NAD binding domain
B4069_RS09205	SM01274	B4069_RS09205
B4069_RS09220	SM00357	Cold shock protein domain
B4069_RS09220	SM00382	ATPases associated with a variety of cellular activities
B4069_RS09220	SM00959	Rho termination factor, N-terminal domain
B4069_RS09250	SM00448	cheY-homologous receiver domain
B4069_RS09280	SM00382	ATPases associated with a variety of cellular activities
B4069_RS09280	SM01086	C-terminal, D2-small domain, of ClpB protein
B4069_RS09285	SM00382	ATPases associated with a variety of cellular activities
B4069_RS09295	SM00670	Large family of predicted nucleotide-binding domains
B4069_RS09325	SM00840	B4069_RS09325
B4069_RS09330	SM00535	Ribonuclease III family
B4069_RS09335	SM00967	RNA 2'-O ribose methyltransferase substrate binding
B4069_RS09360	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
B4069_RS09360	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
B4069_RS09365	SM00649	Ribosomal protein L11/L12
B4069_RS09395	SM00663	RNA polymerase I subunit A N-terminus
B4069_RS09415	SM00838	Elongation factor G C-terminus
B4069_RS09415	SM00889	Elongation factor G, domain IV
B4069_RS09430	SM01403	B4069_RS09430
B4069_RS09450	SM01382	B4069_RS09450
B4069_RS09450	SM01383	B4069_RS09450
B4069_RS09465	SM00322	K homology RNA-binding domain
B4069_RS09485	SM01374	B4069_RS09485
B4069_RS09490	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
B4069_RS09555	SM00316	Ribosomal protein S1-like RNA-binding domain
B4069_RS09575	SM00662	RNA polymerases D
B4069_RS09585	SM00382	ATPases associated with a variety of cellular activities
B4069_RS09590	SM00382	ATPases associated with a variety of cellular activities
B4069_RS09630	SM00646	B4069_RS09630
B4069_RS09645	SM01251	B4069_RS09645
B4069_RS09655	SM00318	Staphylococcal nuclease homologues
B4069_RS09665	SM01005	Alanine racemase, C-terminal domain
B4069_RS09805	SM00257	Lysin motif
B4069_RS09810	SM00857	Resolvase, N terminal domain
B4069_RS09820	SM00861	Transketolase, pyrimidine binding domain
B4069_RS09845	SM00448	cheY-homologous receiver domain
B4069_RS09875	SM00382	ATPases associated with a variety of cellular activities
B4069_RS09880	SM00382	ATPases associated with a variety of cellular activities
B4069_RS09945	SM01118	B4069_RS09945
B4069_RS09955	SM00954	Region found in RelA / SpoT proteins
B4069_RS10195	SM00860	SMI1 / KNR4 family
B4069_RS10245	SM00411	bacterial (prokaryotic) histone like domain
B4069_RS10275	SM00562	B4069_RS10275
B4069_RS10285	SM00138	Methyltransferase, chemotaxis proteins 
B4069_RS10350	SM00028	Tetratricopeptide repeats
B4069_RS10355	SM00914	B4069_RS10355
B4069_RS10405	SM00851	MGS-like domain
B4069_RS10445	SM00479	B4069_RS10445
B4069_RS10445	SM00487	DEAD-like helicases superfamily
B4069_RS10445	SM00491	B4069_RS10445
B4069_RS10475	SM00478	endonuclease III
B4069_RS10475	SM00525	B4069_RS10475
B4069_RS10535	SM00487	DEAD-like helicases superfamily
B4069_RS10535	SM00490	helicase superfamily c-terminal domain
B4069_RS10560	SM00981	B4069_RS10560
B4069_RS10570	SM00491	B4069_RS10570
B4069_RS10585	SM00354	helix_turn _helix lactose operon repressor
B4069_RS10650	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
B4069_RS10650	SM00475	5'-3' exonuclease
B4069_RS10690	SM00357	Cold shock protein domain
B4069_RS10715	SM00567	E-Z type HEAT repeats
B4069_RS10715	SM00932	Scaffold protein Nfu/NifU N terminal
B4069_RS10765	SM00382	ATPases associated with a variety of cellular activities
B4069_RS10810	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS10875	SM00882	Coenzyme A transferase
B4069_RS10880	SM00882	Coenzyme A transferase
B4069_RS10930	SM00014	Acid phosphatase homologues
B4069_RS10965	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B4069_RS10965	SM00245	tail specific protease
B4069_RS11080	SM01060	B4069_RS11080
B4069_RS11085	SM00382	ATPases associated with a variety of cellular activities
B4069_RS11090	SM00062	Bacterial periplasmic substrate-binding proteins
B4069_RS11120	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS11135	SM00567	E-Z type HEAT repeats
B4069_RS11165	SM00763	PrkA AAA domain
B4069_RS11180	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS11210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS11215	SM00382	ATPases associated with a variety of cellular activities
B4069_RS11220	SM00382	ATPases associated with a variety of cellular activities
B4069_RS11230	SM00357	Cold shock protein domain
B4069_RS11240	SM00267	diguanylate cyclase
B4069_RS11270	SM00318	Staphylococcal nuclease homologues
B4069_RS11280	SM00363	S4 RNA-binding domain
B4069_RS11290	SM00116	Domain in cystathionine beta-synthase and other proteins.
B4069_RS11335	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
B4069_RS11335	SM00387	Histidine kinase-like ATPases
B4069_RS11340	SM00421	helix_turn_helix, Lux Regulon
B4069_RS11340	SM00448	cheY-homologous receiver domain
B4069_RS11360	SM00257	Lysin motif
B4069_RS11380	SM00098	Alkaline phosphatase homologues
B4069_RS11385	SM00257	Lysin motif
B4069_RS11415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS11445	SM00563	Phosphate acyltransferases
B4069_RS11510	SM00635	Bacterial Ig-like domain 2
B4069_RS11610	SM00382	ATPases associated with a variety of cellular activities
B4069_RS11620	SM00062	Bacterial periplasmic substrate-binding proteins
B4069_RS11620	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
B4069_RS11630	SM00046	Diacylglycerol kinase catalytic domain (presumed)
B4069_RS11640	SM00422	helix_turn_helix, mercury resistance
B4069_RS11650	SM00861	Transketolase, pyrimidine binding domain
B4069_RS11670	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
B4069_RS11680	SM00091	PAS domain
B4069_RS11680	SM00382	ATPases associated with a variety of cellular activities
B4069_RS11725	SM00646	B4069_RS11725
B4069_RS11750	SM00448	cheY-homologous receiver domain
B4069_RS11760	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B4069_RS11775	SM00363	S4 RNA-binding domain
B4069_RS11780	SM00861	Transketolase, pyrimidine binding domain
B4069_RS11815	SM00878	Biotin carboxylase C-terminal domain
B4069_RS11860	SM00382	ATPases associated with a variety of cellular activities
B4069_RS11870	SM00841	Elongation factor P, C-terminal
B4069_RS11870	SM01185	B4069_RS11870
B4069_RS11905	SM00529	Helix-turn-helix diphteria tox regulatory element
B4069_RS11915	SM00450	Rhodanese Homology Domain
B4069_RS11935	SM00487	DEAD-like helicases superfamily
B4069_RS11935	SM00490	helicase superfamily c-terminal domain
B4069_RS11950	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS12010	SM00382	ATPases associated with a variety of cellular activities
B4069_RS12020	SM01091	Transporter associated domain
B4069_RS12045	SM00849	Metallo-beta-lactamase superfamily
B4069_RS12065	SM00631	B4069_RS12065
B4069_RS12085	SM00028	Tetratricopeptide repeats
B4069_RS12125	SM00382	ATPases associated with a variety of cellular activities
B4069_RS12130	SM00382	ATPases associated with a variety of cellular activities
B4069_RS12175	SM00257	Lysin motif
B4069_RS12210	SM00518	AP endonuclease family 2
B4069_RS12215	SM00487	DEAD-like helicases superfamily
B4069_RS12215	SM00490	helicase superfamily c-terminal domain
B4069_RS12250	SM00400	zinc finger
B4069_RS12250	SM00493	B4069_RS12250
B4069_RS12265	SM00116	Domain in cystathionine beta-synthase and other proteins.
B4069_RS12310	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B4069_RS12365	SM00729	Elongator protein 3, MiaB family, Radical SAM
B4069_RS12380	SM00271	DnaJ molecular chaperone homology domain
B4069_RS12400	SM00729	Elongator protein 3, MiaB family, Radical SAM
B4069_RS12405	SM00838	Elongation factor G C-terminus
B4069_RS12440	SM00849	Metallo-beta-lactamase superfamily
B4069_RS12450	SM00278	Helix-hairpin-helix DNA-binding motif class 1
B4069_RS12470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B4069_RS12480	SM01103	B4069_RS12480
B4069_RS12515	SM00644	B4069_RS12515
B4069_RS12525	SM01350	B4069_RS12525
B4069_RS12580	SM00155	Phospholipase D. Active site motifs.
B4069_RS12585	SM00422	helix_turn_helix, mercury resistance
B4069_RS12620	SM00382	ATPases associated with a variety of cellular activities
B4069_RS12625	SM00382	ATPases associated with a variety of cellular activities
B4069_RS12655	SM00028	Tetratricopeptide repeats
B4069_RS12660	SM00729	Elongator protein 3, MiaB family, Radical SAM
B4069_RS12675	SM00327	von Willebrand factor (vWF) type A domain
B4069_RS12685	SM00327	von Willebrand factor (vWF) type A domain
B4069_RS12720	SM00382	ATPases associated with a variety of cellular activities
B4069_RS12790	SM00420	helix_turn_helix, Deoxyribose operon repressor
B4069_RS12790	SM01134	B4069_RS12790
B4069_RS12845	SM00448	cheY-homologous receiver domain
B4069_RS12845	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS12850	SM00387	Histidine kinase-like ATPases
B4069_RS12855	SM00382	ATPases associated with a variety of cellular activities
B4069_RS12920	SM00062	Bacterial periplasmic substrate-binding proteins
B4069_RS12930	SM00382	ATPases associated with a variety of cellular activities
B4069_RS12960	SM01133	B4069_RS12960
B4069_RS12970	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
B4069_RS13045	SM00860	SMI1 / KNR4 family
B4069_RS13160	SM00487	DEAD-like helicases superfamily
B4069_RS13160	SM00490	helicase superfamily c-terminal domain
B4069_RS13190	SM01060	B4069_RS13190
B4069_RS13240	SM00382	ATPases associated with a variety of cellular activities
B4069_RS13265	SM00382	ATPases associated with a variety of cellular activities
B4069_RS13265	SM00930	B4069_RS13265
B4069_RS13280	SM00493	B4069_RS13280
B4069_RS13335	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS13365	SM00382	ATPases associated with a variety of cellular activities
B4069_RS13390	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B4069_RS13395	SM00448	cheY-homologous receiver domain
B4069_RS13395	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS13400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS13400	SM00387	Histidine kinase-like ATPases
B4069_RS13400	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS13440	SM00421	helix_turn_helix, Lux Regulon
B4069_RS13440	SM00448	cheY-homologous receiver domain
B4069_RS13445	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS13445	SM00387	Histidine kinase-like ATPases
B4069_RS13480	SM00382	ATPases associated with a variety of cellular activities
B4069_RS13510	SM00387	Histidine kinase-like ATPases
B4069_RS13510	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS13515	SM00448	cheY-homologous receiver domain
B4069_RS13515	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS13535	SM00835	Cupin
B4069_RS13550	SM00382	ATPases associated with a variety of cellular activities
B4069_RS13560	SM00382	ATPases associated with a variety of cellular activities
B4069_RS13725	SM00316	Ribosomal protein S1-like RNA-binding domain
B4069_RS13725	SM00357	Cold shock protein domain
B4069_RS13725	SM00955	B4069_RS13725
B4069_RS13745	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS13750	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS13755	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS13785	SM00116	Domain in cystathionine beta-synthase and other proteins.
B4069_RS13785	SM00382	ATPases associated with a variety of cellular activities
B4069_RS13800	SM00752	Horizontally Transferred TransMembrane Domain
B4069_RS13815	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B4069_RS13870	SM01192	B4069_RS13870
B4069_RS13870	SM01193	B4069_RS13870
B4069_RS13895	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
B4069_RS13910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS13935	SM00636	B4069_RS13935
B4069_RS13965	SM00331	Sigma factor PP2C-like phosphatases
B4069_RS13995	SM00354	helix_turn _helix lactose operon repressor
B4069_RS14000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS14000	SM00895	B4069_RS14000
B4069_RS14095	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS14135	SM00640	Glycosyl hydrolases family 32
B4069_RS14180	SM00642	Alpha-amylase domain
B4069_RS14210	SM00642	Alpha-amylase domain
B4069_RS14215	SM00354	helix_turn _helix lactose operon repressor
B4069_RS14235	SM00947	Carbonic anhydrase
B4069_RS14250	SM00382	ATPases associated with a variety of cellular activities
B4069_RS14255	SM00387	Histidine kinase-like ATPases
B4069_RS14260	SM00448	cheY-homologous receiver domain
B4069_RS14260	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS14310	SM00028	Tetratricopeptide repeats
B4069_RS14315	SM00382	ATPases associated with a variety of cellular activities
B4069_RS14420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS14420	SM00866	B4069_RS14420
B4069_RS14430	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS14445	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS14480	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS14490	SM00909	Sporulation and spore germination
B4069_RS14550	SM00917	LeuA allosteric (dimerisation) domain
B4069_RS14555	SM01329	B4069_RS14555
B4069_RS14580	SM00382	ATPases associated with a variety of cellular activities
B4069_RS14580	SM00994	ClpX C4-type zinc finger
B4069_RS14580	SM01086	C-terminal, D2-small domain, of ClpB protein
B4069_RS14585	SM00382	ATPases associated with a variety of cellular activities
B4069_RS14590	SM00382	ATPases associated with a variety of cellular activities
B4069_RS14590	SM00464	Found in ATP-dependent protease La (LON)
B4069_RS14625	SM01004	Delta-aminolevulinic acid dehydratase
B4069_RS14635	SM00257	Lysin motif
B4069_RS14735	SM01317	B4069_RS14735
B4069_RS14780	SM00257	Lysin motif
B4069_RS14835	SM00278	Helix-hairpin-helix DNA-binding motif class 1
B4069_RS14840	SM00382	ATPases associated with a variety of cellular activities
B4069_RS14860	SM01323	B4069_RS14860
B4069_RS14910	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B4069_RS14910	SM00954	Region found in RelA / SpoT proteins
B4069_RS14920	SM00287	Bacterial SH3 domain homologues
B4069_RS14920	SM00646	B4069_RS14920
B4069_RS15030	SM00052	Putative diguanylate phosphodiesterase
B4069_RS15055	SM00257	Lysin motif
B4069_RS15070	SM00260	Two component signalling adaptor domain
B4069_RS15070	SM00448	cheY-homologous receiver domain
B4069_RS15085	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
B4069_RS15085	SM00091	PAS domain
B4069_RS15085	SM00387	Histidine kinase-like ATPases
B4069_RS15085	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS15230	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B4069_RS15230	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
B4069_RS15260	SM00650	Ribosomal RNA adenine dimethylases
B4069_RS15315	SM00732	Likely ribonuclease with RNase H fold.
B4069_RS15325	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
B4069_RS15335	SM00382	ATPases associated with a variety of cellular activities
B4069_RS15340	SM00062	Bacterial periplasmic substrate-binding proteins
B4069_RS15340	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
B4069_RS15370	SM00382	ATPases associated with a variety of cellular activities
B4069_RS15375	SM00028	Tetratricopeptide repeats
B4069_RS15395	SM00382	ATPases associated with a variety of cellular activities
B4069_RS15405	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B4069_RS15440	SM00822	B4069_RS15440
B4069_RS15455	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
B4069_RS15475	SM00829	Enoylreductase
B4069_RS15525	SM00823	Phosphopantetheine attachment site
B4069_RS15565	SM00878	Biotin carboxylase C-terminal domain
B4069_RS15610	SM00606	Cellulose Binding Domain Type IV
B4069_RS15625	SM01067	Cellulose binding domain
B4069_RS15645	SM00434	DNA Topoisomerase IV
B4069_RS15650	SM00387	Histidine kinase-like ATPases
B4069_RS15650	SM00433	TopoisomeraseII
B4069_RS15655	SM00881	CoA binding domain
B4069_RS15660	SM01207	B4069_RS15660
B4069_RS15765	SM00342	helix_turn_helix, arabinose operon control protein
B4069_RS15830	SM00450	Rhodanese Homology Domain
B4069_RS15830	SM00849	Metallo-beta-lactamase superfamily
B4069_RS15840	SM00450	Rhodanese Homology Domain
B4069_RS15870	SM00422	helix_turn_helix, mercury resistance
B4069_RS15885	SM01091	Transporter associated domain
B4069_RS15945	SM00344	helix_turn_helix ASNC type
B4069_RS16000	SM00860	SMI1 / KNR4 family
B4069_RS16045	SM00731	SprT homologues.
B4069_RS16055	SM00316	Ribosomal protein S1-like RNA-binding domain
B4069_RS16055	SM00732	Likely ribonuclease with RNase H fold.
B4069_RS16060	SM00331	Sigma factor PP2C-like phosphatases
B4069_RS16060	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
B4069_RS16080	SM00331	Sigma factor PP2C-like phosphatases
B4069_RS16085	SM00387	Histidine kinase-like ATPases
B4069_RS16110	SM01005	Alanine racemase, C-terminal domain
B4069_RS16140	SM00487	DEAD-like helicases superfamily
B4069_RS16140	SM00490	helicase superfamily c-terminal domain
B4069_RS16190	SM00382	ATPases associated with a variety of cellular activities
B4069_RS16210	SM00448	cheY-homologous receiver domain
B4069_RS16215	SM00091	PAS domain
B4069_RS16215	SM00387	Histidine kinase-like ATPases
B4069_RS16315	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
B4069_RS16315	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
B4069_RS16315	SM00493	B4069_RS16315
B4069_RS16320	SM00344	helix_turn_helix ASNC type
B4069_RS16395	SM00346	helix_turn_helix isocitrate lyase regulation
B4069_RS16400	SM00797	Allophanate hydrolase subunit 2
B4069_RS16405	SM00796	Allophanate hydrolase subunit 1
B4069_RS16480	SM01350	B4069_RS16480
B4069_RS16490	SM00849	Metallo-beta-lactamase superfamily
B4069_RS16515	SM00244	prohibitin homologues
B4069_RS16590	SM00382	ATPases associated with a variety of cellular activities
B4069_RS16620	SM00478	endonuclease III
B4069_RS16620	SM00525	B4069_RS16620
B4069_RS16650	SM00287	Bacterial SH3 domain homologues
B4069_RS16700	SM00316	Ribosomal protein S1-like RNA-binding domain
B4069_RS16795	SM00859	Semialdehyde dehydrogenase, NAD binding domain
B4069_RS16815	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
B4069_RS16820	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
B4069_RS16870	SM00825	Beta-ketoacyl synthase
B4069_RS16880	SM00382	ATPases associated with a variety of cellular activities
B4069_RS16885	SM00382	ATPases associated with a variety of cellular activities
B4069_RS16930	SM01329	B4069_RS16930
B4069_RS16955	SM00420	helix_turn_helix, Deoxyribose operon repressor
B4069_RS16990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS16995	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B4069_RS17025	SM00382	ATPases associated with a variety of cellular activities
B4069_RS17060	SM00028	Tetratricopeptide repeats
B4069_RS17065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS17065	SM00387	Histidine kinase-like ATPases
B4069_RS17065	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS17070	SM00448	cheY-homologous receiver domain
B4069_RS17070	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS17080	SM00382	ATPases associated with a variety of cellular activities
B4069_RS17105	SM00710	Parallel beta-helix repeats
B4069_RS17105	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
B4069_RS17145	SM00062	Bacterial periplasmic substrate-binding proteins
B4069_RS17155	SM00382	ATPases associated with a variety of cellular activities
B4069_RS17170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS17195	SM00823	Phosphopantetheine attachment site
B4069_RS17200	SM00823	Phosphopantetheine attachment site
B4069_RS17200	SM01294	B4069_RS17200
B4069_RS17205	SM00823	Phosphopantetheine attachment site
B4069_RS17205	SM01294	B4069_RS17205
B4069_RS17220	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
B4069_RS17230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B4069_RS17230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS17265	SM00062	Bacterial periplasmic substrate-binding proteins
B4069_RS17305	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B4069_RS17345	SM01091	Transporter associated domain
B4069_RS17350	SM00422	helix_turn_helix, mercury resistance
B4069_RS17420	SM00382	ATPases associated with a variety of cellular activities
B4069_RS17425	SM00382	ATPases associated with a variety of cellular activities
B4069_RS17475	SM00729	Elongator protein 3, MiaB family, Radical SAM
B4069_RS17505	SM00382	ATPases associated with a variety of cellular activities
B4069_RS17525	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B4069_RS17560	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS17590	SM00382	ATPases associated with a variety of cellular activities
B4069_RS17675	SM01022	B4069_RS17675
B4069_RS17690	SM00849	Metallo-beta-lactamase superfamily
B4069_RS17730	SM00829	Enoylreductase
B4069_RS17740	SM00855	Phosphoglycerate mutase family
B4069_RS17760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B4069_RS17775	SM00914	B4069_RS17775
B4069_RS17790	SM00894	Excalibur calcium-binding domain
B4069_RS17825	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS17850	SM00354	helix_turn _helix lactose operon repressor
B4069_RS17985	SM00342	helix_turn_helix, arabinose operon control protein
B4069_RS18010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS18055	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
B4069_RS18100	SM00860	SMI1 / KNR4 family
B4069_RS18145	SM01230	B4069_RS18145
B4069_RS18150	SM00422	helix_turn_helix, mercury resistance
B4069_RS18175	SM00857	Resolvase, N terminal domain
B4069_RS18185	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS18195	SM00506	Appr-1"-p processing enzyme
B4069_RS18310	SM00871	Bacterial transcription activator, effector binding domain
B4069_RS18345	SM00496	Intron-encoded nuclease repeat 2
B4069_RS18490	SM00481	DNA polymerase alpha chain like domain
B4069_RS18665	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS18685	SM00530	Helix-turn-helix XRE-family like proteins 
B4069_RS18795	SM00465	GIY-YIG type nucleases (URI domain)
B4069_RS18825	SM00411	bacterial (prokaryotic) histone like domain
B4069_RS18880	SM00465	GIY-YIG type nucleases (URI domain)
B4069_RS18905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS18905	SM00866	B4069_RS18905
B4069_RS18910	SM00382	ATPases associated with a variety of cellular activities
B4069_RS18925	SM00873	B3/4 domain
B4069_RS18935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS18985	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
B4069_RS19065	SM00729	Elongator protein 3, MiaB family, Radical SAM
B4069_RS19165	SM01240	B4069_RS19165
B4069_RS19250	SM00823	Phosphopantetheine attachment site
B4069_RS19250	SM00824	Thioesterase
B4069_RS19255	SM00923	MbtH-like protein
B4069_RS19265	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
B4069_RS19265	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
B4069_RS19310	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B4069_RS19355	SM00052	Putative diguanylate phosphodiesterase
B4069_RS19380	SM00387	Histidine kinase-like ATPases
B4069_RS19385	SM00421	helix_turn_helix, Lux Regulon
B4069_RS19385	SM00448	cheY-homologous receiver domain
B4069_RS19450	SM00382	ATPases associated with a variety of cellular activities
B4069_RS19460	SM00448	cheY-homologous receiver domain
B4069_RS19465	SM00091	PAS domain
B4069_RS19465	SM00387	Histidine kinase-like ATPases
B4069_RS19495	SM00479	B4069_RS19495
B4069_RS19500	SM01298	B4069_RS19500
B4069_RS19505	SM00387	Histidine kinase-like ATPases
B4069_RS19505	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS19525	SM00344	helix_turn_helix ASNC type
B4069_RS19535	SM00316	Ribosomal protein S1-like RNA-binding domain
B4069_RS19590	SM01091	Transporter associated domain
B4069_RS19595	SM00642	Alpha-amylase domain
B4069_RS19615	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B4069_RS19615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS19615	SM00319	Homologues of the ligand binding domain of Tar
B4069_RS19625	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B4069_RS19625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS19625	SM00319	Homologues of the ligand binding domain of Tar
B4069_RS19630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B4069_RS19630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS19630	SM00319	Homologues of the ligand binding domain of Tar
B4069_RS19640	SM01007	Class II Aldolase and Adducin N-terminal domain
B4069_RS19645	SM00420	helix_turn_helix, Deoxyribose operon repressor
B4069_RS19645	SM01134	B4069_RS19645
B4069_RS19695	SM00047	Lysozyme subfamily 2
B4069_RS19770	SM00478	endonuclease III
B4069_RS19815	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B4069_RS19835	SM00729	Elongator protein 3, MiaB family, Radical SAM
B4069_RS19845	SM00382	ATPases associated with a variety of cellular activities
B4069_RS19870	SM00448	cheY-homologous receiver domain
B4069_RS19870	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS19875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS19875	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS19950	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS19975	SM00342	helix_turn_helix, arabinose operon control protein
B4069_RS20025	SM00450	Rhodanese Homology Domain
B4069_RS20045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS20045	SM00866	B4069_RS20045
B4069_RS20085	SM00387	Histidine kinase-like ATPases
B4069_RS20090	SM00448	cheY-homologous receiver domain
B4069_RS20095	SM01130	B4069_RS20095
B4069_RS20110	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
B4069_RS20115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS20115	SM00895	B4069_RS20115
B4069_RS20140	SM00448	cheY-homologous receiver domain
B4069_RS20140	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS20150	SM00382	ATPases associated with a variety of cellular activities
B4069_RS20175	SM00327	von Willebrand factor (vWF) type A domain
B4069_RS20220	SM00870	B4069_RS20220
B4069_RS20245	SM00448	cheY-homologous receiver domain
B4069_RS20245	SM00850	LytTr DNA-binding domain
B4069_RS20250	SM00382	ATPases associated with a variety of cellular activities
B4069_RS20285	SM00028	Tetratricopeptide repeats
B4069_RS20295	SM00642	Alpha-amylase domain
B4069_RS20305	SM00382	ATPases associated with a variety of cellular activities
B4069_RS20360	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B4069_RS20365	SM00116	Domain in cystathionine beta-synthase and other proteins.
B4069_RS20365	SM00382	ATPases associated with a variety of cellular activities
B4069_RS20495	SM00829	Enoylreductase
B4069_RS20540	SM00829	Enoylreductase
B4069_RS20575	SM00883	Chaperonin 10 Kd subunit
B4069_RS20600	SM00881	CoA binding domain
B4069_RS20610	SM00382	ATPases associated with a variety of cellular activities
B4069_RS20680	SM00448	cheY-homologous receiver domain
B4069_RS20680	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS20685	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
B4069_RS20685	SM00091	PAS domain
B4069_RS20685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS20685	SM00387	Histidine kinase-like ATPases
B4069_RS20685	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS20700	SM00849	Metallo-beta-lactamase superfamily
B4069_RS20705	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B4069_RS20725	SM00448	cheY-homologous receiver domain
B4069_RS20725	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS20730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B4069_RS20730	SM00387	Histidine kinase-like ATPases
B4069_RS20730	SM00388	His Kinase A (phosphoacceptor) domain
B4069_RS20735	SM00382	ATPases associated with a variety of cellular activities
B4069_RS20820	SM00382	ATPases associated with a variety of cellular activities
B4069_RS20835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS20835	SM00866	B4069_RS20835
B4069_RS20860	SM01350	B4069_RS20860
B4069_RS20875	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS20875	SM00895	B4069_RS20875
B4069_RS20900	SM00347	helix_turn_helix multiple antibiotic resistance protein
B4069_RS20935	SM00564	beta-propeller repeat
B4069_RS20965	SM00387	Histidine kinase-like ATPases
B4069_RS21165	SM00642	Alpha-amylase domain
B4069_RS21225	SM00984	UDP binding domain
B4069_RS21265	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
B4069_RS21275	SM00382	ATPases associated with a variety of cellular activities
B4069_RS21310	SM00947	Carbonic anhydrase
B4069_RS21315	SM01234	B4069_RS21315
B4069_RS21355	SM00382	ATPases associated with a variety of cellular activities
B4069_RS21415	SM00729	Elongator protein 3, MiaB family, Radical SAM
B4069_RS21430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B4069_RS21435	SM00382	ATPases associated with a variety of cellular activities
B4069_RS21450	SM00382	ATPases associated with a variety of cellular activities
B4069_RS21460	SM00448	cheY-homologous receiver domain
B4069_RS21460	SM00862	Transcriptional regulatory protein, C terminal
B4069_RS21465	SM00387	Histidine kinase-like ATPases
B4069_RS21470	SM00382	ATPases associated with a variety of cellular activities
B4069_RS21545	SM00380	DNA-binding domain in plant proteins such as APETALA2 and EREBPs
