A4A60_RS00005 SM00382 ATPases associated with a variety of cellular activities A4A60_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain A4A60_RS00010 SM00480 DNA polymerase III beta subunit A4A60_RS00030 SM00387 Histidine kinase-like ATPases A4A60_RS00030 SM00433 TopoisomeraseII A4A60_RS00035 SM00434 DNA Topoisomerase IV A4A60_RS00070 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_RS00070 SM01240 A4A60_RS00070 A4A60_RS00075 SM00936 Penicillin-binding protein 5, C-terminal domain A4A60_RS00110 SM00257 Lysin motif A4A60_RS00110 SM00636 A4A60_RS00110 A4A60_RS00130 SM00382 ATPases associated with a variety of cellular activities A4A60_RS00140 SM00493 A4A60_RS00140 A4A60_RS00235 SM00465 GIY-YIG type nucleases (URI domain) A4A60_RS00250 SM00966 SpoVT / AbrB like domain A4A60_RS00265 SM01208 A4A60_RS00265 A4A60_RS00270 SM00493 A4A60_RS00270 A4A60_RS00275 SM00650 Ribosomal RNA adenine dimethylases A4A60_RS00325 SM01400 A4A60_RS00325 A4A60_RS00345 SM00487 DEAD-like helicases superfamily A4A60_RS00345 SM00490 helicase superfamily c-terminal domain A4A60_RS00345 SM00982 A4A60_RS00345 A4A60_RS00345 SM01058 CarD-like/TRCF domain A4A60_RS00350 SM00966 SpoVT / AbrB like domain A4A60_RS00365 SM00363 S4 RNA-binding domain A4A60_RS00385 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_RS00400 SM00331 Sigma factor PP2C-like phosphatases A4A60_RS00400 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A4A60_RS00410 SM00220 Serine/Threonine protein kinases, catalytic domain A4A60_RS00415 SM00977 TilS substrate C-terminal domain A4A60_RS00425 SM00382 ATPases associated with a variety of cellular activities A4A60_RS00470 SM00905 Dihydroneopterin aldolase A4A60_RS00480 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS00585 SM00382 ATPases associated with a variety of cellular activities A4A60_RS00585 SM01086 C-terminal, D2-small domain, of ClpB protein A4A60_RS00590 SM00382 ATPases associated with a variety of cellular activities A4A60_RS00600 SM00670 Large family of predicted nucleotide-binding domains A4A60_RS00630 SM00840 A4A60_RS00630 A4A60_RS00635 SM00535 Ribonuclease III family A4A60_RS00640 SM00967 RNA 2'-O ribose methyltransferase substrate binding A4A60_RS00665 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A4A60_RS00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4A60_RS00670 SM00649 Ribosomal protein L11/L12 A4A60_RS00700 SM00663 RNA polymerase I subunit A N-terminus A4A60_RS00720 SM00838 Elongation factor G C-terminus A4A60_RS00720 SM00889 Elongation factor G, domain IV A4A60_RS00735 SM01403 A4A60_RS00735 A4A60_RS00755 SM01382 A4A60_RS00755 A4A60_RS00755 SM01383 A4A60_RS00755 A4A60_RS00770 SM00322 K homology RNA-binding domain A4A60_RS00790 SM01374 A4A60_RS00790 A4A60_RS00795 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4A60_RS00860 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_RS00880 SM00662 RNA polymerases D A4A60_RS00890 SM00382 ATPases associated with a variety of cellular activities A4A60_RS00895 SM00382 ATPases associated with a variety of cellular activities A4A60_RS00930 SM00646 A4A60_RS00930 A4A60_RS00945 SM01251 A4A60_RS00945 A4A60_RS01065 SM00342 helix_turn_helix, arabinose operon control protein A4A60_RS01170 SM00822 A4A60_RS01170 A4A60_RS01170 SM00823 Phosphopantetheine attachment site A4A60_RS01170 SM00825 Beta-ketoacyl synthase A4A60_RS01175 SM00822 A4A60_RS01175 A4A60_RS01175 SM00823 Phosphopantetheine attachment site A4A60_RS01175 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A4A60_RS01185 SM00849 Metallo-beta-lactamase superfamily A4A60_RS01215 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS01300 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS01330 SM00342 helix_turn_helix, arabinose operon control protein A4A60_RS01345 SM00257 Lysin motif A4A60_RS01400 SM00342 helix_turn_helix, arabinose operon control protein A4A60_RS01405 SM00450 Rhodanese Homology Domain A4A60_RS01430 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS01430 SM00866 A4A60_RS01430 A4A60_RS01470 SM00387 Histidine kinase-like ATPases A4A60_RS01475 SM00448 cheY-homologous receiver domain A4A60_RS01480 SM01130 A4A60_RS01480 A4A60_RS01495 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A4A60_RS01500 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS01500 SM00895 A4A60_RS01500 A4A60_RS01505 SM00858 A4A60_RS01505 A4A60_RS01525 SM00448 cheY-homologous receiver domain A4A60_RS01525 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS01530 SM00387 Histidine kinase-like ATPases A4A60_RS01530 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS01535 SM00382 ATPases associated with a variety of cellular activities A4A60_RS01605 SM00870 A4A60_RS01605 A4A60_RS01625 SM00387 Histidine kinase-like ATPases A4A60_RS01630 SM00448 cheY-homologous receiver domain A4A60_RS01630 SM00850 LytTr DNA-binding domain A4A60_RS01635 SM00382 ATPases associated with a variety of cellular activities A4A60_RS01670 SM00028 Tetratricopeptide repeats A4A60_RS01680 SM00642 Alpha-amylase domain A4A60_RS01690 SM00382 ATPases associated with a variety of cellular activities A4A60_RS01790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_RS01795 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_RS01795 SM00382 ATPases associated with a variety of cellular activities A4A60_RS01950 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4A60_RS01990 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_RS02010 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS02050 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A4A60_RS02065 SM00823 Phosphopantetheine attachment site A4A60_RS02065 SM01294 A4A60_RS02065 A4A60_RS02070 SM00823 Phosphopantetheine attachment site A4A60_RS02070 SM01294 A4A60_RS02070 A4A60_RS02075 SM00823 Phosphopantetheine attachment site A4A60_RS02100 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS02115 SM00382 ATPases associated with a variety of cellular activities A4A60_RS02125 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_RS02165 SM00710 Parallel beta-helix repeats A4A60_RS02165 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A4A60_RS02195 SM00382 ATPases associated with a variety of cellular activities A4A60_RS02205 SM00448 cheY-homologous receiver domain A4A60_RS02205 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS02210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS02210 SM00387 Histidine kinase-like ATPases A4A60_RS02210 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS02215 SM00028 Tetratricopeptide repeats A4A60_RS02245 SM00382 ATPases associated with a variety of cellular activities A4A60_RS02275 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_RS02280 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS02315 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_RS02340 SM01329 A4A60_RS02340 A4A60_RS02395 SM00796 Allophanate hydrolase subunit 1 A4A60_RS02400 SM00797 Allophanate hydrolase subunit 2 A4A60_RS02405 SM00346 helix_turn_helix isocitrate lyase regulation A4A60_RS02480 SM00344 helix_turn_helix ASNC type A4A60_RS02485 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A4A60_RS02485 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A4A60_RS02485 SM00493 A4A60_RS02485 A4A60_RS02505 SM00752 Horizontally Transferred TransMembrane Domain A4A60_RS02565 SM00091 PAS domain A4A60_RS02565 SM00387 Histidine kinase-like ATPases A4A60_RS02570 SM00448 cheY-homologous receiver domain A4A60_RS02590 SM00382 ATPases associated with a variety of cellular activities A4A60_RS02640 SM00487 DEAD-like helicases superfamily A4A60_RS02640 SM00490 helicase superfamily c-terminal domain A4A60_RS02670 SM01005 Alanine racemase, C-terminal domain A4A60_RS02695 SM00387 Histidine kinase-like ATPases A4A60_RS02700 SM00331 Sigma factor PP2C-like phosphatases A4A60_RS02720 SM00331 Sigma factor PP2C-like phosphatases A4A60_RS02720 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A4A60_RS02725 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_RS02725 SM00732 Likely ribonuclease with RNase H fold. A4A60_RS02735 SM00731 SprT homologues. A4A60_RS02800 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS02830 SM00357 Cold shock protein domain A4A60_RS02835 SM01058 CarD-like/TRCF domain A4A60_RS02850 SM00342 helix_turn_helix, arabinose operon control protein A4A60_RS02860 SM00342 helix_turn_helix, arabinose operon control protein A4A60_RS02860 SM00871 Bacterial transcription activator, effector binding domain A4A60_RS02865 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS02905 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS02930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_RS02955 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS02970 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_RS02985 SM00387 Histidine kinase-like ATPases A4A60_RS02990 SM00421 helix_turn_helix, Lux Regulon A4A60_RS02990 SM00448 cheY-homologous receiver domain A4A60_RS03015 SM00422 helix_turn_helix, mercury resistance A4A60_RS03015 SM00871 Bacterial transcription activator, effector binding domain A4A60_RS03100 SM00382 ATPases associated with a variety of cellular activities A4A60_RS03115 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS03130 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS03130 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_RS03145 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS03145 SM00895 A4A60_RS03145 A4A60_RS03150 SM00257 Lysin motif A4A60_RS03150 SM00636 A4A60_RS03150 A4A60_RS03165 SM00098 Alkaline phosphatase homologues A4A60_RS03185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_RS03220 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS03220 SM00866 A4A60_RS03220 A4A60_RS03305 SM00382 ATPases associated with a variety of cellular activities A4A60_RS03315 SM00881 CoA binding domain A4A60_RS03340 SM00883 Chaperonin 10 Kd subunit A4A60_RS03360 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS03365 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS03380 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS03425 SM00382 ATPases associated with a variety of cellular activities A4A60_RS03485 SM00507 HNH nucleases A4A60_RS03570 SM00047 Lysozyme subfamily 2 A4A60_RS03600 SM00257 Lysin motif A4A60_RS03600 SM00644 A4A60_RS03600 A4A60_RS03660 SM00028 Tetratricopeptide repeats A4A60_RS03660 SM00382 ATPases associated with a variety of cellular activities A4A60_RS03665 SM00829 Enoylreductase A4A60_RS03710 SM00829 Enoylreductase A4A60_RS03785 SM00460 Transglutaminase/protease-like homologues A4A60_RS03835 SM01001 AIR carboxylase A4A60_RS03845 SM00998 Adenylosuccinate lyase C-terminus A4A60_RS03860 SM01211 A4A60_RS03860 A4A60_RS03885 SM00798 AICARFT/IMPCHase bienzyme A4A60_RS03885 SM00851 MGS-like domain A4A60_RS03890 SM01209 A4A60_RS03890 A4A60_RS03890 SM01210 A4A60_RS03890 A4A60_RS03895 SM00344 helix_turn_helix ASNC type A4A60_RS03945 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4A60_RS03945 SM00292 breast cancer carboxy-terminal domain A4A60_RS03945 SM00532 Ligase N family A4A60_RS03980 SM00845 GatB domain A4A60_RS03995 SM00046 Diacylglycerol kinase catalytic domain (presumed) A4A60_RS04005 SM00487 DEAD-like helicases superfamily A4A60_RS04005 SM00490 helicase superfamily c-terminal domain A4A60_RS04025 SM00028 Tetratricopeptide repeats A4A60_RS04065 SM00028 Tetratricopeptide repeats A4A60_RS04130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS04130 SM00387 Histidine kinase-like ATPases A4A60_RS04160 SM00342 helix_turn_helix, arabinose operon control protein A4A60_RS04330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_RS04335 SM00382 ATPases associated with a variety of cellular activities A4A60_RS04345 SM00422 helix_turn_helix, mercury resistance A4A60_RS04370 SM00382 ATPases associated with a variety of cellular activities A4A60_RS04375 SM00487 DEAD-like helicases superfamily A4A60_RS04375 SM00490 helicase superfamily c-terminal domain A4A60_RS04390 SM00829 Enoylreductase A4A60_RS04395 SM00382 ATPases associated with a variety of cellular activities A4A60_RS04425 SM00656 A4A60_RS04425 A4A60_RS04435 SM00387 Histidine kinase-like ATPases A4A60_RS04440 SM00448 cheY-homologous receiver domain A4A60_RS04460 SM00849 Metallo-beta-lactamase superfamily A4A60_RS04525 SM00642 Alpha-amylase domain A4A60_RS04530 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS04530 SM00866 A4A60_RS04530 A4A60_RS04560 SM00226 Low molecular weight phosphatase family A4A60_RS04630 SM00478 endonuclease III A4A60_RS04665 SM00861 Transketolase, pyrimidine binding domain A4A60_RS04680 SM00382 ATPases associated with a variety of cellular activities A4A60_RS04735 SM00382 ATPases associated with a variety of cellular activities A4A60_RS04740 SM00382 ATPases associated with a variety of cellular activities A4A60_RS04755 SM00387 Histidine kinase-like ATPases A4A60_RS04760 SM00421 helix_turn_helix, Lux Regulon A4A60_RS04760 SM00448 cheY-homologous receiver domain A4A60_RS04765 SM00382 ATPases associated with a variety of cellular activities A4A60_RS04815 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS04895 SM00287 Bacterial SH3 domain homologues A4A60_RS04925 SM00478 endonuclease III A4A60_RS04925 SM00525 A4A60_RS04925 A4A60_RS04955 SM00382 ATPases associated with a variety of cellular activities A4A60_RS05135 SM01060 A4A60_RS05135 A4A60_RS05140 SM00382 ATPases associated with a variety of cellular activities A4A60_RS05145 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_RS05175 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS05190 SM00567 E-Z type HEAT repeats A4A60_RS05220 SM00763 PrkA AAA domain A4A60_RS05235 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS05265 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS05270 SM00382 ATPases associated with a variety of cellular activities A4A60_RS05275 SM00382 ATPases associated with a variety of cellular activities A4A60_RS05285 SM00357 Cold shock protein domain A4A60_RS05295 SM00267 diguanylate cyclase A4A60_RS05350 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS05405 SM00028 Tetratricopeptide repeats A4A60_RS05430 SM00318 Staphylococcal nuclease homologues A4A60_RS05440 SM00363 S4 RNA-binding domain A4A60_RS05450 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_RS05495 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A4A60_RS05495 SM00387 Histidine kinase-like ATPases A4A60_RS05500 SM00421 helix_turn_helix, Lux Regulon A4A60_RS05500 SM00448 cheY-homologous receiver domain A4A60_RS05520 SM00257 Lysin motif A4A60_RS05545 SM00098 Alkaline phosphatase homologues A4A60_RS05550 SM00257 Lysin motif A4A60_RS05580 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS05610 SM00563 Phosphate acyltransferases A4A60_RS05615 SM01091 Transporter associated domain A4A60_RS05620 SM00422 helix_turn_helix, mercury resistance A4A60_RS05630 SM01091 Transporter associated domain A4A60_RS05690 SM00382 ATPases associated with a variety of cellular activities A4A60_RS05695 SM00382 ATPases associated with a variety of cellular activities A4A60_RS05745 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_RS05775 SM00382 ATPases associated with a variety of cellular activities A4A60_RS05795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_RS05825 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS05855 SM00382 ATPases associated with a variety of cellular activities A4A60_RS05945 SM01022 A4A60_RS05945 A4A60_RS05960 SM00849 Metallo-beta-lactamase superfamily A4A60_RS06005 SM00829 Enoylreductase A4A60_RS06025 SM00855 Phosphoglycerate mutase family A4A60_RS06045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_RS06060 SM00914 A4A60_RS06060 A4A60_RS06075 SM00894 Excalibur calcium-binding domain A4A60_RS06110 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS06145 SM00354 helix_turn _helix lactose operon repressor A4A60_RS06285 SM00342 helix_turn_helix, arabinose operon control protein A4A60_RS06290 SM00354 helix_turn _helix lactose operon repressor A4A60_RS06310 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS06345 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_RS06355 SM00752 Horizontally Transferred TransMembrane Domain A4A60_RS06440 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4A60_RS06460 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A4A60_RS06465 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4A60_RS06525 SM00825 Beta-ketoacyl synthase A4A60_RS06535 SM00382 ATPases associated with a variety of cellular activities A4A60_RS06540 SM00382 ATPases associated with a variety of cellular activities A4A60_RS06585 SM00382 ATPases associated with a variety of cellular activities A4A60_RS06590 SM00382 ATPases associated with a variety of cellular activities A4A60_RS06655 SM01118 A4A60_RS06655 A4A60_RS06665 SM00954 Region found in RelA / SpoT proteins A4A60_RS06855 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS06890 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS07085 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4A60_RS07085 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A4A60_RS07150 SM00382 ATPases associated with a variety of cellular activities A4A60_RS07190 SM00829 Enoylreductase A4A60_RS07210 SM00354 helix_turn _helix lactose operon repressor A4A60_RS07220 SM00858 A4A60_RS07220 A4A60_RS07240 SM00382 ATPases associated with a variety of cellular activities A4A60_RS07260 SM00028 Tetratricopeptide repeats A4A60_RS07275 SM00257 Lysin motif A4A60_RS07275 SM00644 A4A60_RS07275 A4A60_RS07300 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS07315 SM00382 ATPases associated with a variety of cellular activities A4A60_RS07420 SM00257 Lysin motif A4A60_RS07485 SM00257 Lysin motif A4A60_RS07485 SM00644 A4A60_RS07485 A4A60_RS07540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_RS07565 SM00382 ATPases associated with a variety of cellular activities A4A60_RS07580 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A4A60_RS07590 SM00382 ATPases associated with a variety of cellular activities A4A60_RS07650 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4A60_RS07665 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS07705 SM00382 ATPases associated with a variety of cellular activities A4A60_RS07720 SM00448 cheY-homologous receiver domain A4A60_RS07720 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS07725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS07725 SM00387 Histidine kinase-like ATPases A4A60_RS07725 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS07755 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_RS07755 SM00924 MgtE intracellular N domain A4A60_RS07760 SM00422 helix_turn_helix, mercury resistance A4A60_RS07775 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS07810 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen A4A60_RS07815 SM00052 Putative diguanylate phosphodiesterase A4A60_RS07815 SM00267 diguanylate cyclase A4A60_RS07875 SM00091 PAS domain A4A60_RS07875 SM00387 Histidine kinase-like ATPases A4A60_RS07875 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS07920 SM01007 Class II Aldolase and Adducin N-terminal domain A4A60_RS07945 SM00387 Histidine kinase-like ATPases A4A60_RS07945 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS07950 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS07965 SM00382 ATPases associated with a variety of cellular activities A4A60_RS07965 SM01086 C-terminal, D2-small domain, of ClpB protein A4A60_RS08050 SM00354 helix_turn _helix lactose operon repressor A4A60_RS08055 SM01061 CAT RNA binding domain A4A60_RS08090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_RS08090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS08125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4A60_RS08125 SM00091 PAS domain A4A60_RS08125 SM00387 Histidine kinase-like ATPases A4A60_RS08125 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS08140 SM00260 Two component signalling adaptor domain A4A60_RS08140 SM00448 cheY-homologous receiver domain A4A60_RS08155 SM00257 Lysin motif A4A60_RS08170 SM00052 Putative diguanylate phosphodiesterase A4A60_RS08280 SM00852 Probable molybdopterin binding domain A4A60_RS08300 SM00382 ATPases associated with a variety of cellular activities A4A60_RS08305 SM00382 ATPases associated with a variety of cellular activities A4A60_RS08320 SM00382 ATPases associated with a variety of cellular activities A4A60_RS08325 SM01066 Carbohydrate binding domain A4A60_RS08330 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_RS08330 SM01134 A4A60_RS08330 A4A60_RS08355 SM00382 ATPases associated with a variety of cellular activities A4A60_RS08385 SM00966 SpoVT / AbrB like domain A4A60_RS08390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4A60_RS08390 SM00091 PAS domain A4A60_RS08390 SM00387 Histidine kinase-like ATPases A4A60_RS08390 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS08410 SM00849 Metallo-beta-lactamase superfamily A4A60_RS08445 SM00861 Transketolase, pyrimidine binding domain A4A60_RS08550 SM00838 Elongation factor G C-terminus A4A60_RS08570 SM00670 Large family of predicted nucleotide-binding domains A4A60_RS08595 SM00878 Biotin carboxylase C-terminal domain A4A60_RS08645 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_RS08695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_RS08755 SM00740 A4A60_RS08755 A4A60_RS08765 SM00740 A4A60_RS08765 A4A60_RS08830 SM00842 Cell division protein FtsA A4A60_RS08835 SM00864 Tubulin/FtsZ family, GTPase domain A4A60_RS08835 SM00865 Tubulin/FtsZ family, C-terminal domain A4A60_RS08860 SM00382 ATPases associated with a variety of cellular activities A4A60_RS08895 SM00363 S4 RNA-binding domain A4A60_RS08925 SM00363 S4 RNA-binding domain A4A60_RS08950 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A4A60_RS08955 SM00851 MGS-like domain A4A60_RS08955 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4A60_RS08955 SM01209 A4A60_RS08955 A4A60_RS08970 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A4A60_RS09020 SM00831 Cation transporter/ATPase, N-terminus A4A60_RS09035 SM00072 Guanylate kinase homologues. A4A60_RS09040 SM01409 A4A60_RS09040 A4A60_RS09050 SM00487 DEAD-like helicases superfamily A4A60_RS09050 SM00490 helicase superfamily c-terminal domain A4A60_RS09075 SM00331 Sigma factor PP2C-like phosphatases A4A60_RS09075 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A4A60_RS09080 SM00220 Serine/Threonine protein kinases, catalytic domain A4A60_RS09080 SM00740 A4A60_RS09080 A4A60_RS09095 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain A4A60_RS09115 SM01120 A4A60_RS09115 A4A60_RS09115 SM01121 A4A60_RS09115 A4A60_RS09130 SM00487 DEAD-like helicases superfamily A4A60_RS09130 SM00490 helicase superfamily c-terminal domain A4A60_RS09145 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A4A60_RS09150 SM00822 A4A60_RS09150 A4A60_RS09160 SM00358 Double-stranded RNA binding motif A4A60_RS09160 SM00535 Ribonuclease III family A4A60_RS09165 SM00968 SMC proteins Flexible Hinge Domain A4A60_RS09170 SM00382 ATPases associated with a variety of cellular activities A4A60_RS09170 SM00962 SRP54-type protein, GTPase domain A4A60_RS09170 SM00963 SRP54-type protein, helical bundle domain A4A60_RS09185 SM00382 ATPases associated with a variety of cellular activities A4A60_RS09185 SM00962 SRP54-type protein, GTPase domain A4A60_RS09185 SM00963 SRP54-type protein, helical bundle domain A4A60_RS09245 SM00881 CoA binding domain A4A60_RS09255 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A4A60_RS09255 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A4A60_RS09255 SM00493 A4A60_RS09255 A4A60_RS09275 SM00382 ATPases associated with a variety of cellular activities A4A60_RS09275 SM01086 C-terminal, D2-small domain, of ClpB protein A4A60_RS09315 SM00382 ATPases associated with a variety of cellular activities A4A60_RS09365 SM00448 cheY-homologous receiver domain A4A60_RS09400 SM00962 SRP54-type protein, GTPase domain A4A60_RS09410 SM00448 cheY-homologous receiver domain A4A60_RS09415 SM00073 Histidine Phosphotransfer domain A4A60_RS09415 SM00260 Two component signalling adaptor domain A4A60_RS09415 SM00387 Histidine kinase-like ATPases A4A60_RS09415 SM01231 A4A60_RS09415 A4A60_RS09420 SM00260 Two component signalling adaptor domain A4A60_RS09480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_RS09490 SM00479 A4A60_RS09490 A4A60_RS09490 SM00481 DNA polymerase alpha chain like domain A4A60_RS09500 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_RS09500 SM00322 K homology RNA-binding domain A4A60_RS09535 SM00904 Riboflavin kinase A4A60_RS09540 SM01387 A4A60_RS09540 A4A60_RS09545 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_RS09545 SM00322 K homology RNA-binding domain A4A60_RS09580 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4A60_RS09590 SM01130 A4A60_RS09590 A4A60_RS09595 SM00849 Metallo-beta-lactamase superfamily A4A60_RS09610 SM00382 ATPases associated with a variety of cellular activities A4A60_RS09610 SM00843 A4A60_RS09610 A4A60_RS09615 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS09615 SM00866 A4A60_RS09615 A4A60_RS09650 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS09660 SM00852 Probable molybdopterin binding domain A4A60_RS09665 SM00382 ATPases associated with a variety of cellular activities A4A60_RS09675 SM00322 K homology RNA-binding domain A4A60_RS09675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_RS09690 SM00829 Enoylreductase A4A60_RS09705 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_RS09720 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A4A60_RS09720 SM00534 ATPase domain of DNA mismatch repair MUTS family A4A60_RS09725 SM00853 MutL C terminal dimerisation domain A4A60_RS09725 SM01340 A4A60_RS09725 A4A60_RS09790 SM00507 HNH nucleases A4A60_RS09840 SM00849 Metallo-beta-lactamase superfamily A4A60_RS09925 SM00646 A4A60_RS09925 A4A60_RS09930 SM00382 ATPases associated with a variety of cellular activities A4A60_RS09950 SM00422 helix_turn_helix, mercury resistance A4A60_RS09955 SM01230 A4A60_RS09955 A4A60_RS10000 SM00860 SMI1 / KNR4 family A4A60_RS10095 SM00318 Staphylococcal nuclease homologues A4A60_RS10105 SM01005 Alanine racemase, C-terminal domain A4A60_RS10245 SM00257 Lysin motif A4A60_RS10250 SM00857 Resolvase, N terminal domain A4A60_RS10260 SM00861 Transketolase, pyrimidine binding domain A4A60_RS10285 SM00448 cheY-homologous receiver domain A4A60_RS10365 SM01207 A4A60_RS10365 A4A60_RS10370 SM00881 CoA binding domain A4A60_RS10375 SM00387 Histidine kinase-like ATPases A4A60_RS10375 SM00433 TopoisomeraseII A4A60_RS10380 SM00434 DNA Topoisomerase IV A4A60_RS10400 SM01067 Cellulose binding domain A4A60_RS10460 SM00878 Biotin carboxylase C-terminal domain A4A60_RS10495 SM00823 Phosphopantetheine attachment site A4A60_RS10545 SM00829 Enoylreductase A4A60_RS10565 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4A60_RS10585 SM00822 A4A60_RS10585 A4A60_RS10615 SM00382 ATPases associated with a variety of cellular activities A4A60_RS10620 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS10640 SM00155 Phospholipase D. Active site motifs. A4A60_RS10745 SM00835 Cupin A4A60_RS10775 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS10840 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS10880 SM00382 ATPases associated with a variety of cellular activities A4A60_RS10970 SM00028 Tetratricopeptide repeats A4A60_RS11035 SM00860 SMI1 / KNR4 family A4A60_RS11040 SM00860 SMI1 / KNR4 family A4A60_RS11045 SM00860 SMI1 / KNR4 family A4A60_RS11055 SM00860 SMI1 / KNR4 family A4A60_RS11070 SM00342 helix_turn_helix, arabinose operon control protein A4A60_RS11085 SM00849 Metallo-beta-lactamase superfamily A4A60_RS11090 SM00871 Bacterial transcription activator, effector binding domain A4A60_RS11105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_RS11155 SM00421 helix_turn_helix, Lux Regulon A4A60_RS11155 SM00448 cheY-homologous receiver domain A4A60_RS11160 SM00257 Lysin motif A4A60_RS11165 SM00341 Helicase and RNase D C-terminal A4A60_RS11165 SM00487 DEAD-like helicases superfamily A4A60_RS11165 SM00490 helicase superfamily c-terminal domain A4A60_RS11165 SM00956 A4A60_RS11165 A4A60_RS11260 SM00861 Transketolase, pyrimidine binding domain A4A60_RS11265 SM00327 von Willebrand factor (vWF) type A domain A4A60_RS11270 SM00382 ATPases associated with a variety of cellular activities A4A60_RS11280 SM00257 Lysin motif A4A60_RS11375 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_RS11375 SM00245 tail specific protease A4A60_RS11410 SM00014 Acid phosphatase homologues A4A60_RS11465 SM00882 Coenzyme A transferase A4A60_RS11530 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS11575 SM00382 ATPases associated with a variety of cellular activities A4A60_RS11620 SM00567 E-Z type HEAT repeats A4A60_RS11620 SM00932 Scaffold protein Nfu/NifU N terminal A4A60_RS11625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_RS11645 SM00357 Cold shock protein domain A4A60_RS11685 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A4A60_RS11685 SM00475 5'-3' exonuclease A4A60_RS11750 SM00354 helix_turn _helix lactose operon repressor A4A60_RS11765 SM00491 A4A60_RS11765 A4A60_RS11775 SM00981 A4A60_RS11775 A4A60_RS11805 SM00487 DEAD-like helicases superfamily A4A60_RS11805 SM00490 helicase superfamily c-terminal domain A4A60_RS11865 SM00478 endonuclease III A4A60_RS11865 SM00525 A4A60_RS11865 A4A60_RS11895 SM00479 A4A60_RS11895 A4A60_RS11895 SM00487 DEAD-like helicases superfamily A4A60_RS11895 SM00491 A4A60_RS11895 A4A60_RS11935 SM00851 MGS-like domain A4A60_RS11985 SM00914 A4A60_RS11985 A4A60_RS11990 SM00028 Tetratricopeptide repeats A4A60_RS12055 SM00138 Methyltransferase, chemotaxis proteins A4A60_RS12065 SM00562 A4A60_RS12065 A4A60_RS12105 SM00411 bacterial (prokaryotic) histone like domain A4A60_RS12165 SM01240 A4A60_RS12165 A4A60_RS12170 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_RS12210 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4A60_RS12230 SM00257 Lysin motif A4A60_RS12240 SM00487 DEAD-like helicases superfamily A4A60_RS12240 SM00490 helicase superfamily c-terminal domain A4A60_RS12280 SM00091 PAS domain A4A60_RS12280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS12280 SM00387 Histidine kinase-like ATPases A4A60_RS12280 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS12285 SM00448 cheY-homologous receiver domain A4A60_RS12285 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS12305 SM00363 S4 RNA-binding domain A4A60_RS12320 SM00936 Penicillin-binding protein 5, C-terminal domain A4A60_RS12405 SM00477 DNA/RNA non-specific endonuclease A4A60_RS12405 SM00892 DNA/RNA non-specific endonuclease A4A60_RS12415 SM00645 Papain family cysteine protease A4A60_RS12535 SM00387 Histidine kinase-like ATPases A4A60_RS12545 SM00936 Penicillin-binding protein 5, C-terminal domain A4A60_RS12585 SM00919 Malic enzyme, NAD binding domain A4A60_RS12585 SM01274 A4A60_RS12585 A4A60_RS12600 SM00870 A4A60_RS12600 A4A60_RS12605 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS12710 SM00849 Metallo-beta-lactamase superfamily A4A60_RS12745 SM00849 Metallo-beta-lactamase superfamily A4A60_RS12755 SM01350 A4A60_RS12755 A4A60_RS12810 SM00382 ATPases associated with a variety of cellular activities A4A60_RS12820 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_RS12820 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4A60_RS12830 SM00046 Diacylglycerol kinase catalytic domain (presumed) A4A60_RS12840 SM00422 helix_turn_helix, mercury resistance A4A60_RS12850 SM00861 Transketolase, pyrimidine binding domain A4A60_RS12870 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4A60_RS12880 SM00091 PAS domain A4A60_RS12880 SM00382 ATPases associated with a variety of cellular activities A4A60_RS12925 SM00646 A4A60_RS12925 A4A60_RS12950 SM00448 cheY-homologous receiver domain A4A60_RS12960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_RS12975 SM00363 S4 RNA-binding domain A4A60_RS12980 SM00861 Transketolase, pyrimidine binding domain A4A60_RS13015 SM00878 Biotin carboxylase C-terminal domain A4A60_RS13060 SM00382 ATPases associated with a variety of cellular activities A4A60_RS13070 SM00841 Elongation factor P, C-terminal A4A60_RS13070 SM01185 A4A60_RS13070 A4A60_RS13105 SM00529 Helix-turn-helix diphteria tox regulatory element A4A60_RS13115 SM00450 Rhodanese Homology Domain A4A60_RS13135 SM00487 DEAD-like helicases superfamily A4A60_RS13135 SM00490 helicase superfamily c-terminal domain A4A60_RS13150 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS13210 SM00382 ATPases associated with a variety of cellular activities A4A60_RS13230 SM01091 Transporter associated domain A4A60_RS13260 SM00849 Metallo-beta-lactamase superfamily A4A60_RS13280 SM00631 A4A60_RS13280 A4A60_RS13300 SM00028 Tetratricopeptide repeats A4A60_RS13340 SM00382 ATPases associated with a variety of cellular activities A4A60_RS13345 SM00382 ATPases associated with a variety of cellular activities A4A60_RS13390 SM00257 Lysin motif A4A60_RS13425 SM00518 AP endonuclease family 2 A4A60_RS13430 SM00487 DEAD-like helicases superfamily A4A60_RS13430 SM00490 helicase superfamily c-terminal domain A4A60_RS13465 SM00400 zinc finger A4A60_RS13465 SM00493 A4A60_RS13465 A4A60_RS13480 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_RS13525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_RS13580 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_RS13595 SM00271 DnaJ molecular chaperone homology domain A4A60_RS13615 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_RS13620 SM00838 Elongation factor G C-terminus A4A60_RS13655 SM00849 Metallo-beta-lactamase superfamily A4A60_RS13665 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4A60_RS13685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_RS13695 SM01103 A4A60_RS13695 A4A60_RS13730 SM00644 A4A60_RS13730 A4A60_RS13740 SM01350 A4A60_RS13740 A4A60_RS13785 SM00028 Tetratricopeptide repeats A4A60_RS13805 SM00860 SMI1 / KNR4 family A4A60_RS13810 SM00860 SMI1 / KNR4 family A4A60_RS13845 SM00382 ATPases associated with a variety of cellular activities A4A60_RS13890 SM00422 helix_turn_helix, mercury resistance A4A60_RS13910 SM01091 Transporter associated domain A4A60_RS13965 SM00344 helix_turn_helix ASNC type A4A60_RS14050 SM00287 Bacterial SH3 domain homologues A4A60_RS14090 SM00422 helix_turn_helix, mercury resistance A4A60_RS14100 SM00829 Enoylreductase A4A60_RS14110 SM00640 Glycosyl hydrolases family 32 A4A60_RS14135 SM00382 ATPases associated with a variety of cellular activities A4A60_RS14205 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4A60_RS14205 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A4A60_RS14235 SM00650 Ribosomal RNA adenine dimethylases A4A60_RS14290 SM00732 Likely ribonuclease with RNase H fold. A4A60_RS14300 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4A60_RS14310 SM00382 ATPases associated with a variety of cellular activities A4A60_RS14315 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_RS14315 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4A60_RS14350 SM00382 ATPases associated with a variety of cellular activities A4A60_RS14355 SM00028 Tetratricopeptide repeats A4A60_RS14375 SM00382 ATPases associated with a variety of cellular activities A4A60_RS14405 SM00287 Bacterial SH3 domain homologues A4A60_RS14405 SM00646 A4A60_RS14405 A4A60_RS14415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_RS14415 SM00954 Region found in RelA / SpoT proteins A4A60_RS14465 SM01323 A4A60_RS14465 A4A60_RS14485 SM00382 ATPases associated with a variety of cellular activities A4A60_RS14490 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4A60_RS14545 SM00257 Lysin motif A4A60_RS14590 SM01317 A4A60_RS14590 A4A60_RS14690 SM00257 Lysin motif A4A60_RS14700 SM01004 Delta-aminolevulinic acid dehydratase A4A60_RS14735 SM00382 ATPases associated with a variety of cellular activities A4A60_RS14735 SM00464 Found in ATP-dependent protease La (LON) A4A60_RS14740 SM00382 ATPases associated with a variety of cellular activities A4A60_RS14745 SM00382 ATPases associated with a variety of cellular activities A4A60_RS14745 SM00994 ClpX C4-type zinc finger A4A60_RS14745 SM01086 C-terminal, D2-small domain, of ClpB protein A4A60_RS14770 SM01329 A4A60_RS14770 A4A60_RS14775 SM00917 LeuA allosteric (dimerisation) domain A4A60_RS14845 SM00487 DEAD-like helicases superfamily A4A60_RS14845 SM00490 helicase superfamily c-terminal domain A4A60_RS14885 SM00909 Sporulation and spore germination A4A60_RS14895 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS14900 SM00421 helix_turn_helix, Lux Regulon A4A60_RS14940 SM00465 GIY-YIG type nucleases (URI domain) A4A60_RS14950 SM00813 Alpha-L-arabinofuranosidase C-terminus A4A60_RS14955 SM00893 Electron transfer flavoprotein domain A4A60_RS14960 SM00893 Electron transfer flavoprotein domain A4A60_RS14985 SM00463 Small MutS-related domain A4A60_RS14985 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A4A60_RS14985 SM00534 ATPase domain of DNA mismatch repair MUTS family A4A60_RS14990 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4A60_RS14990 SM00481 DNA polymerase alpha chain like domain A4A60_RS14990 SM00483 DNA polymerase X family A4A60_RS15010 SM00873 B3/4 domain A4A60_RS15010 SM00874 tRNA synthetase B5 domain A4A60_RS15010 SM00896 Ferredoxin-fold anticodon binding domain A4A60_RS15025 SM00967 RNA 2'-O ribose methyltransferase substrate binding A4A60_RS15060 SM00813 Alpha-L-arabinofuranosidase C-terminus A4A60_RS15090 SM01007 Class II Aldolase and Adducin N-terminal domain A4A60_RS15155 SM00448 cheY-homologous receiver domain A4A60_RS15155 SM00850 LytTr DNA-binding domain A4A60_RS15160 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A4A60_RS15160 SM00387 Histidine kinase-like ATPases A4A60_RS15170 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4A60_RS15185 SM00382 ATPases associated with a variety of cellular activities A4A60_RS15205 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4A60_RS15240 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A4A60_RS15240 SM01232 A4A60_RS15240 A4A60_RS15245 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A4A60_RS15245 SM00474 3'-5' exonuclease A4A60_RS15245 SM00475 5'-3' exonuclease A4A60_RS15245 SM00482 DNA polymerase A domain A4A60_RS15250 SM00091 PAS domain A4A60_RS15250 SM00387 Histidine kinase-like ATPases A4A60_RS15250 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS15255 SM00448 cheY-homologous receiver domain A4A60_RS15255 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS15265 SM01329 A4A60_RS15265 A4A60_RS15315 SM00919 Malic enzyme, NAD binding domain A4A60_RS15315 SM01274 A4A60_RS15315 A4A60_RS15320 SM00481 DNA polymerase alpha chain like domain A4A60_RS15350 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_RS15355 SM00849 Metallo-beta-lactamase superfamily A4A60_RS15380 SM00852 Probable molybdopterin binding domain A4A60_RS15450 SM00981 A4A60_RS15450 A4A60_RS15480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A4A60_RS15485 SM00267 diguanylate cyclase A4A60_RS15490 SM00363 S4 RNA-binding domain A4A60_RS15490 SM01390 A4A60_RS15490 A4A60_RS15500 SM00363 S4 RNA-binding domain A4A60_RS15515 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_RS15535 SM00354 helix_turn _helix lactose operon repressor A4A60_RS15540 SM00830 Chorismate mutase type II A4A60_RS15565 SM00382 ATPases associated with a variety of cellular activities A4A60_RS15565 SM00843 A4A60_RS15565 A4A60_RS15600 SM00919 Malic enzyme, NAD binding domain A4A60_RS15600 SM01274 A4A60_RS15600 A4A60_RS15605 SM00849 Metallo-beta-lactamase superfamily A4A60_RS15625 SM00642 Alpha-amylase domain A4A60_RS15630 SM00046 Diacylglycerol kinase catalytic domain (presumed) A4A60_RS15665 SM00382 ATPases associated with a variety of cellular activities A4A60_RS15670 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_RS15675 SM00363 S4 RNA-binding domain A4A60_RS15750 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_RS15750 SM00876 Biotin and Thiamin Synthesis associated domain A4A60_RS15780 SM00354 helix_turn _helix lactose operon repressor A4A60_RS15805 SM00450 Rhodanese Homology Domain A4A60_RS15820 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4A60_RS15820 SM00091 PAS domain A4A60_RS15845 SM00382 ATPases associated with a variety of cellular activities A4A60_RS15850 SM00387 Histidine kinase-like ATPases A4A60_RS15855 SM00448 cheY-homologous receiver domain A4A60_RS15855 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS15865 SM00382 ATPases associated with a variety of cellular activities A4A60_RS15880 SM00382 ATPases associated with a variety of cellular activities A4A60_RS15885 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS15900 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_RS15960 SM00382 ATPases associated with a variety of cellular activities A4A60_RS16000 SM01234 A4A60_RS16000 A4A60_RS16005 SM00947 Carbonic anhydrase A4A60_RS16040 SM00382 ATPases associated with a variety of cellular activities A4A60_RS16050 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A4A60_RS16090 SM00984 UDP binding domain A4A60_RS16150 SM00642 Alpha-amylase domain A4A60_RS16290 SM00244 prohibitin homologues A4A60_RS16350 SM00047 Lysozyme subfamily 2 A4A60_RS16400 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_RS16400 SM01134 A4A60_RS16400 A4A60_RS16405 SM01007 Class II Aldolase and Adducin N-terminal domain A4A60_RS16420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_RS16420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS16420 SM00319 Homologues of the ligand binding domain of Tar A4A60_RS16425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_RS16425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS16425 SM00319 Homologues of the ligand binding domain of Tar A4A60_RS16430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_RS16430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS16430 SM00319 Homologues of the ligand binding domain of Tar A4A60_RS16450 SM00642 Alpha-amylase domain A4A60_RS16455 SM01091 Transporter associated domain A4A60_RS16510 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_RS16520 SM00344 helix_turn_helix ASNC type A4A60_RS16540 SM00387 Histidine kinase-like ATPases A4A60_RS16540 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS16545 SM01298 A4A60_RS16545 A4A60_RS16550 SM00479 A4A60_RS16550 A4A60_RS16580 SM00091 PAS domain A4A60_RS16580 SM00387 Histidine kinase-like ATPases A4A60_RS16585 SM00448 cheY-homologous receiver domain A4A60_RS16595 SM00382 ATPases associated with a variety of cellular activities A4A60_RS16660 SM00421 helix_turn_helix, Lux Regulon A4A60_RS16660 SM00448 cheY-homologous receiver domain A4A60_RS16665 SM00387 Histidine kinase-like ATPases A4A60_RS16690 SM00052 Putative diguanylate phosphodiesterase A4A60_RS16735 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_RS16780 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A4A60_RS16780 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A4A60_RS16790 SM00923 MbtH-like protein A4A60_RS16795 SM00823 Phosphopantetheine attachment site A4A60_RS16795 SM00824 Thioesterase A4A60_RS16880 SM01240 A4A60_RS16880 A4A60_RS16985 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_RS17070 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A4A60_RS17110 SM00382 ATPases associated with a variety of cellular activities A4A60_RS17115 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS17115 SM00866 A4A60_RS17115 A4A60_RS17145 SM00465 GIY-YIG type nucleases (URI domain) A4A60_RS17180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_RS17195 SM00860 SMI1 / KNR4 family A4A60_RS17200 SM00257 Lysin motif A4A60_RS17200 SM00644 A4A60_RS17200 A4A60_RS17410 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS17415 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS17455 SM00382 ATPases associated with a variety of cellular activities A4A60_RS17480 SM00382 ATPases associated with a variety of cellular activities A4A60_RS17480 SM00930 A4A60_RS17480 A4A60_RS17495 SM00493 A4A60_RS17495 A4A60_RS17550 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS17580 SM00382 ATPases associated with a variety of cellular activities A4A60_RS17600 SM00382 ATPases associated with a variety of cellular activities A4A60_RS17660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_RS17665 SM00448 cheY-homologous receiver domain A4A60_RS17665 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS17670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS17670 SM00387 Histidine kinase-like ATPases A4A60_RS17670 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS17710 SM00421 helix_turn_helix, Lux Regulon A4A60_RS17710 SM00448 cheY-homologous receiver domain A4A60_RS17715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS17715 SM00387 Histidine kinase-like ATPases A4A60_RS17750 SM00382 ATPases associated with a variety of cellular activities A4A60_RS17775 SM00387 Histidine kinase-like ATPases A4A60_RS17775 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS17780 SM00448 cheY-homologous receiver domain A4A60_RS17780 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS17800 SM00835 Cupin A4A60_RS17815 SM00382 ATPases associated with a variety of cellular activities A4A60_RS17825 SM00382 ATPases associated with a variety of cellular activities A4A60_RS18015 SM00257 Lysin motif A4A60_RS18015 SM00644 A4A60_RS18015 A4A60_RS18040 SM00047 Lysozyme subfamily 2 A4A60_RS18230 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS18235 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS18240 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS18265 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_RS18265 SM00357 Cold shock protein domain A4A60_RS18265 SM00955 A4A60_RS18265 A4A60_RS18285 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS18290 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS18295 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS18305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_RS18305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS18325 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_RS18325 SM00382 ATPases associated with a variety of cellular activities A4A60_RS18350 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_RS18350 SM00382 ATPases associated with a variety of cellular activities A4A60_RS18385 SM01192 A4A60_RS18385 A4A60_RS18385 SM01193 A4A60_RS18385 A4A60_RS18410 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4A60_RS18425 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS18480 SM00421 helix_turn_helix, Lux Regulon A4A60_RS18480 SM00448 cheY-homologous receiver domain A4A60_RS18495 SM00382 ATPases associated with a variety of cellular activities A4A60_RS18505 SM00331 Sigma factor PP2C-like phosphatases A4A60_RS18535 SM00354 helix_turn _helix lactose operon repressor A4A60_RS18540 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS18540 SM00895 A4A60_RS18540 A4A60_RS18635 SM00530 Helix-turn-helix XRE-family like proteins A4A60_RS18675 SM00640 Glycosyl hydrolases family 32 A4A60_RS18720 SM00642 Alpha-amylase domain A4A60_RS18750 SM00642 Alpha-amylase domain A4A60_RS18755 SM00354 helix_turn _helix lactose operon repressor A4A60_RS18775 SM00947 Carbonic anhydrase A4A60_RS18790 SM00382 ATPases associated with a variety of cellular activities A4A60_RS18795 SM00387 Histidine kinase-like ATPases A4A60_RS18800 SM00448 cheY-homologous receiver domain A4A60_RS18800 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS18850 SM00028 Tetratricopeptide repeats A4A60_RS18855 SM00382 ATPases associated with a variety of cellular activities A4A60_RS18970 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS18970 SM00866 A4A60_RS18970 A4A60_RS19020 SM00382 ATPases associated with a variety of cellular activities A4A60_RS19025 SM00487 DEAD-like helicases superfamily A4A60_RS19025 SM00490 helicase superfamily c-terminal domain A4A60_RS19050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_RS19060 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_RS19060 SM00245 tail specific protease A4A60_RS19070 SM00382 ATPases associated with a variety of cellular activities A4A60_RS19085 SM00937 A4A60_RS19085 A4A60_RS19090 SM00957 SecA DEAD-like domain A4A60_RS19090 SM00958 SecA preprotein cross-linking domain A4A60_RS19190 SM00487 DEAD-like helicases superfamily A4A60_RS19190 SM00490 helicase superfamily c-terminal domain A4A60_RS19200 SM00421 helix_turn_helix, Lux Regulon A4A60_RS19200 SM00448 cheY-homologous receiver domain A4A60_RS19205 SM00387 Histidine kinase-like ATPases A4A60_RS19250 SM00382 ATPases associated with a variety of cellular activities A4A60_RS19285 SM00984 UDP binding domain A4A60_RS19325 SM00382 ATPases associated with a variety of cellular activities A4A60_RS19370 SM00047 Lysozyme subfamily 2 A4A60_RS19370 SM00287 Bacterial SH3 domain homologues A4A60_RS19430 SM00854 Bacterial capsule synthesis protein PGA_cap A4A60_RS19450 SM00354 helix_turn _helix lactose operon repressor A4A60_RS19465 SM00382 ATPases associated with a variety of cellular activities A4A60_RS19480 SM00287 Bacterial SH3 domain homologues A4A60_RS19535 SM00903 Flavin reductase like domain A4A60_RS19550 SM00344 helix_turn_helix ASNC type A4A60_RS19625 SM00984 UDP binding domain A4A60_RS19655 SM00487 DEAD-like helicases superfamily A4A60_RS19655 SM00490 helicase superfamily c-terminal domain A4A60_RS19665 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_RS19665 SM01134 A4A60_RS19665 A4A60_RS19690 SM00387 Histidine kinase-like ATPases A4A60_RS19705 SM00028 Tetratricopeptide repeats A4A60_RS19730 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS19740 SM00710 Parallel beta-helix repeats A4A60_RS19740 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A4A60_RS19770 SM00938 Nitrogen regulatory protein P-II A4A60_RS19775 SM00014 Acid phosphatase homologues A4A60_RS19810 SM00155 Phospholipase D. Active site motifs. A4A60_RS19815 SM00422 helix_turn_helix, mercury resistance A4A60_RS19865 SM00028 Tetratricopeptide repeats A4A60_RS19870 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_RS19885 SM00327 von Willebrand factor (vWF) type A domain A4A60_RS19895 SM00327 von Willebrand factor (vWF) type A domain A4A60_RS19930 SM00382 ATPases associated with a variety of cellular activities A4A60_RS19995 SM00226 Low molecular weight phosphatase family A4A60_RS20035 SM00937 A4A60_RS20035 A4A60_RS20055 SM00919 Malic enzyme, NAD binding domain A4A60_RS20055 SM01274 A4A60_RS20055 A4A60_RS20070 SM00357 Cold shock protein domain A4A60_RS20070 SM00382 ATPases associated with a variety of cellular activities A4A60_RS20070 SM00959 Rho termination factor, N-terminal domain A4A60_RS20100 SM00448 cheY-homologous receiver domain A4A60_RS20140 SM00155 Phospholipase D. Active site motifs. A4A60_RS20165 SM00836 DALR anticodon binding domain A4A60_RS20165 SM01016 Arginyl tRNA synthetase N terminal dom A4A60_RS20180 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_RS20230 SM00028 Tetratricopeptide repeats A4A60_RS20280 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS20285 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4A60_RS20310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_RS20405 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4A60_RS20445 SM00858 A4A60_RS20445 A4A60_RS20500 SM00986 Uracil DNA glycosylase superfamily A4A60_RS20500 SM00987 UreE urease accessory protein, C-terminal domain A4A60_RS20520 SM00640 Glycosyl hydrolases family 32 A4A60_RS20535 SM01061 CAT RNA binding domain A4A60_RS20690 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4A60_RS20720 SM01061 CAT RNA binding domain A4A60_RS20740 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS20745 SM00363 S4 RNA-binding domain A4A60_RS20755 SM00954 Region found in RelA / SpoT proteins A4A60_RS20850 SM01060 A4A60_RS20850 A4A60_RS20865 SM00382 ATPases associated with a variety of cellular activities A4A60_RS20900 SM00382 ATPases associated with a variety of cellular activities A4A60_RS20905 SM00382 ATPases associated with a variety of cellular activities A4A60_RS20940 SM00382 ATPases associated with a variety of cellular activities A4A60_RS20980 SM00421 helix_turn_helix, Lux Regulon A4A60_RS20980 SM00448 cheY-homologous receiver domain A4A60_RS21020 SM00882 Coenzyme A transferase A4A60_RS21025 SM00882 Coenzyme A transferase A4A60_RS21060 SM01060 A4A60_RS21060 A4A60_RS21075 SM01061 CAT RNA binding domain A4A60_RS21090 SM00487 DEAD-like helicases superfamily A4A60_RS21090 SM00490 helicase superfamily c-terminal domain A4A60_RS21240 SM00860 SMI1 / KNR4 family A4A60_RS21260 SM00487 DEAD-like helicases superfamily A4A60_RS21260 SM00490 helicase superfamily c-terminal domain A4A60_RS21290 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A4A60_RS21300 SM01133 A4A60_RS21300 A4A60_RS21330 SM00382 ATPases associated with a variety of cellular activities A4A60_RS21340 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_RS21405 SM00382 ATPases associated with a variety of cellular activities A4A60_RS21410 SM00387 Histidine kinase-like ATPases A4A60_RS21415 SM00448 cheY-homologous receiver domain A4A60_RS21415 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS21470 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_RS21470 SM01134 A4A60_RS21470 A4A60_RS21505 SM00387 Histidine kinase-like ATPases A4A60_RS21565 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS21590 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS21590 SM00895 A4A60_RS21590 A4A60_RS21605 SM01350 A4A60_RS21605 A4A60_RS21630 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_RS21630 SM00866 A4A60_RS21630 A4A60_RS21640 SM00382 ATPases associated with a variety of cellular activities A4A60_RS21670 SM00382 ATPases associated with a variety of cellular activities A4A60_RS21730 SM00487 DEAD-like helicases superfamily A4A60_RS21730 SM00490 helicase superfamily c-terminal domain A4A60_RS21815 SM00752 Horizontally Transferred TransMembrane Domain A4A60_RS21830 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_RS21835 SM00091 PAS domain A4A60_RS21835 SM00382 ATPases associated with a variety of cellular activities A4A60_RS21845 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_RS21850 SM00849 Metallo-beta-lactamase superfamily A4A60_RS21865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4A60_RS21865 SM00091 PAS domain A4A60_RS21865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_RS21865 SM00387 Histidine kinase-like ATPases A4A60_RS21865 SM00388 His Kinase A (phosphoacceptor) domain A4A60_RS21870 SM00448 cheY-homologous receiver domain A4A60_RS21870 SM00862 Transcriptional regulatory protein, C terminal A4A60_RS21895 SM00788 Adenylosuccinate synthetase A4A60_RS21905 SM00382 ATPases associated with a variety of cellular activities A4A60_RS21945 SM00267 diguanylate cyclase A4A60_RS21970 SM01131 A4A60_RS21970 A4A60_RS21990 SM00422 helix_turn_helix, mercury resistance A4A60_RS22015 SM00849 Metallo-beta-lactamase superfamily A4A60_RS22020 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_RS22050 SM00871 Bacterial transcription activator, effector binding domain A4A60_RS22070 SM01266 A4A60_RS22070 A4A60_RS22110 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4A60_RS22140 SM00470 ParB-like nuclease domain A4A60_RS22155 SM00470 ParB-like nuclease domain A4A60_RS22165 SM01228 A4A60_RS22165 A4A60_RS22175 SM00322 K homology RNA-binding domain A4A60_RS22175 SM00393 Putative single-stranded nucleic acids-binding domain A4A60_RS22175 SM01245 A4A60_RS22175