        rlbA NONE
        recF NONE
        remB NONE
        gyrB    6384 ..    6409 + -10.6  -5.24129   ATCTAATCATAAAAA         GCCTTATTTC CAATAA GAAATAAGGC          TTTTTTCTGAACAAG 100 35
        gyrA    9057 ..    9077 + -13.3  -5.39721   GAAGTGTGAGAAAAA            GCGCAGCTG AAA TAGCTGCGC            TTTTTTGTGTCATAA 100 32
GII78_RS00040   11026 ..   11038 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 96
GII78_RS00045 NONE
GII78_RS00050   11278 ..   11288 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  70 85
GII78_RS00055   14261 ..   14278 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   14408 ..   14426 + -14.6  -5.80003   CCAAGCAAGTTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTGTTAA 100 35
        guaB   16997 ..   17021 +  -9.3   -5.9873   ACAAATTAAAAACAT          TTGACAGGGTC TCT GACTCTGTCTA          TTTTTTTTATACTGA 100 50
GII78_RS00075   18467 ..   18490 +    -6  -3.63068   TCTAATCAATTGAAA          GAGCTCTGAT GGAT GTTAGGGCTC           TTTCGCGTAATATAC  61 36
        pdxS NONE
        pdxT   20398 ..   20429 + -15.2  -5.48213   AGGGTGGCAACGCGA      GAGCTCTCGTCCCT TTAT GGGGATGAGGGCTC       TTTTTATTTTCGATA 100 274
        serS   21759 ..   21780 + -10.1  -4.96646   CGTAAATTATGGAAA           GGCGTGCCT GACA AGGTGCGCC            TTTTTGCTTATGTAA 100 36
GII78_RS00095   22026 ..   22048 +  -8.4  -5.79595   TTGGAGATTGTTTTG           TCCGTTGCAT TCG GTGCGGCGGA           TTTTTTATTTTAAAG 100 76
GII78_RS00120 NONE
         ffs   26300 ..   26319 + -10.8  -5.60689   CATCAAATTTTCAGA            CTCACCTA ATAT TAGGTGAG             TTTTTTGTTATGTAA 100 50
        dnaX NONE
GII78_RS00135 NONE
        recR NONE
GII78_RS00145 NONE
        bofA   29679 ..   29694 +  -3.2  -5.00616   ATTCTAATATACGTC              GCTGAT GACG AACAGC               TTTTTTGAAAAGGAA  70 78
GII78_RS00155   31494 ..   31506 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 96
GII78_RS00160 NONE
GII78_RS00165   31746 ..   31756 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  70 85
GII78_RS00170   34729 ..   34746 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   34876 ..   34894 +   -11  -5.68438   CCAAGCAAGCTTAAA             CCCAGCTT AAT GAGCTGGG             TTTTTTGTTTACTCA 100 35
        csfB   35239 ..   35252 +  -6.7  -5.70829   GCCATTATATTCATA               GACCT GAAA AGGTC                TTTTTTTGTACTCTT  93 25
GII78_RS00185 NONE
GII78_RS00190   37156 ..   37168 +  -4.8  -2.89511   AAGGAAAGATAGTTA                CCAG TAAGT CTGG                CTTTAAGTTCTGTCA  50 29
GII78_RS00195 NONE
GII78_RS00200   39291 ..   39305 +  -2.9  -3.38218   GTGATCGATGAAGCG               TTGAA AAAAA TTCAA               TTGTGACCTGTTTCC  46 5
        darA   39692 ..   39708 +  -3.7  -4.13014   TATTTGTCCTTCCAG              TCGATGA ATT TCATCAA              TTTTAAGGATCTGAA  58 3
GII78_RS00210 NONE
        holB NONE
GII78_RS00220 NONE
        yabA   42379 ..   42401 +  -8.4  -4.58663   AAAAAATAGGGAAAA           GGCTTCCG CATAAGA CGGGAGCC           TTTTTCAAAGGTACT  88 32
GII78_RS00230 NONE
GII78_RS00235 NONE
        rsmI   44319 ..   44342 +  -9.7  -5.24129   TAAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTACAAGAA 100 31
        metG   47150 ..   47191 + -10.3  -3.34398   TAAATAATGATAAGA CAAAAGGTGTTTCACGTGT AACA ATTCGTCGAACACCTTTTG  TGTTTCGACAAGAAA  80 34
GII78_RS00255   48060 ..   48078 +  -3.8  -3.86524   AGTTCTACATGCTTT             CTTCTCCT CAT AGGATAGG             TTTGTCGACAAGTCT  56 97
GII78_RS00260   49474 ..   49494 +    -9  -5.68023   ATATACTTATGTATT            CAGAGGGT TTTGC GCCCTCTG            TTTTTTTCGTTATAA 100 42
        rnmV NONE
        rsmA   51022 ..   51039 +  -9.9  -5.45802   AACGGATTGTATAAA             GCCCTTT TCTA AAAGGGC              TTTTTGTTTTGCGCA 100 14
        prtG   52078 ..   52100 +  -9.9  -5.80951   ATTAACAGTTGAAAA           CCTGCATAG GAGAG CTATGCGGG           TTTTTTATTTTACAT 100 36
GII78_RS00280   52542 ..   52564 +  -8.5  -5.46706   GTGGCATTTTAACGG           GCAGTGAAC CTTTT GTTTACTGC           TTTTTGTTTTGCCCT 100 29
GII78_RS00285   52893 ..   52915 +  -9.8  -6.09196   CGATAAGGATGTGAC           CCGGGGGACG TGC TGTTCCCTGG           TTTTTTTATTTTGGA 100 35
GII78_RS00290 NONE
        purR NONE
GII78_RS00300   55196 ..   55221 + -11.9  -5.67283   GAAATAATAAGAAAA         GTGATTCTGGG AGAG CCCGGGATCAC          TTTTTTATTTACCTT 100 34
       spoVG   55694 ..   55735 +  -5.3  -5.33848   ATAACCAAAAAGCAA GGACTGCTG--AAAGGGCT AACATA AGCCTTTTGCCGGCGGTCC TTTTTTAATTCTGAT  86 44
        glmU NONE
GII78_RS00315 NONE
GII78_RS00320   58922 ..   58946 +  -7.9  -4.46926   ACAATAATAGCTTAA          GGCGTAACC CTCCCGC GGTTACGTC          TTTTGTGCTAGAATG  82 34
GII78_RS00325 NONE
         fin   59879 ..   59907 +  -8.9   -5.1523   ATTTATTCAATAAAA        AGCTTTGGTGTAG ACA CTAGACCAAAGCG        TTTTTCTGTTCTCGC 100 28
         mfd   63497 ..   63507 +    -4  -3.83205   TTTGTTACTCTCTGG                 TGTA TAT TACA                 TTTGATGTGACGGAT  56 43
       spoVT   64186 ..   64211 +  -9.1   -4.7497   AAATAGGTATGTAAA         GAACAGC-TCTC CTT GGGACGCTGTTC         TTTTTCATGCGTGCC 100 60
GII78_RS00345 NONE
        mazG NONE
GII78_RS00355 NONE
        yabP NONE
        yabQ NONE
       divIC   69073 ..   69090 +  -3.5  -2.90075   GTAGCCTTGTTGACA             CTTAAAT TTTT ATTTAGG              TATAATTAAGCAAAC  44 37
GII78_RS00375   69556 ..   69579 +  -8.9  -5.58179   TATAAAATAAATGAA          GCATCCGTT CATCCC GACGGATGC           TTTTTTATTATCCTC 100 53
GII78_RS00380 NONE
GII78_RS00385   69865 ..   69887 +  -8.5  -5.85011   GGTCATCCTAACAAA           TCGGTTTCT CTTGC AGAAGCCGA           TTTTTTTCATTTTTA 100 33
      spoIIE   72589 ..   72600 +  -2.2  -3.21276   GGGAATATATGAATC                TGAG AATC CTCG                 TATTCTCCAGGAGGA  43 77
GII78_RS00395 NONE
        prkT   74400 ..   74411 +    -3  -3.61356   GGTTGAAAGTGTTAG                GATA TGAA TATC                 TTTAAAATACCTGCT  48 84
        tilS NONE
         hpt NONE
        ftsH   78435 ..   78454 + -11.4  -5.72616   TTCTTTCTAAAAAAA            CTGCCGGC TGAC GCTGGCAG             TTTTTTTATGTAAAT 100 47
GII78_RS00420 NONE
        hslO   80263 ..   80283 + -11.9  -4.98531   TTCGTGACCAAACTA            CCCGCTAAG CTC TTTAGCGGG            TTTTTAATTTGAGAA 100 18
GII78_RS00430 NONE
        cysK   82225 ..   82242 + -12.7  -5.88197   TAAAAAAAGCCAAAA             CTCCCGG TCCG CCGGGAG              TTTTTTTATATTTCG 100 38
GII78_RS00440 NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
GII78_RS00470 NONE
        dusB   88174 ..   88194 +  -5.4  -5.14894   TCTATTTGCTGCTCA            CTGCTAGT TTTAC GCTGGCAG            TTTTTCTGCTTTTTT  81 49
        lysS   89749 ..   89782 + -10.4  -4.77896   AACGCTAATAAAGAA     GAGCGGTATCCT CCATAGAGAA AGGATGCCGCTC      TTTTTAAATTCCTTA 100 33
GII78_RS00485   91667 ..   91692 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII78_RS00490   94733 ..   94750 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   94873 ..   94888 +    -4  -3.31322   GACGCCGCCAAGCAA              TTGCAC GTTA GTGTAA               TTATGGAGGATTAGC  50 28
GII78_RS00500 NONE
GII78_RS00505   95052 ..   95064 +  -3.5  -3.09648   TTGCCGGCACCACTT                TTATA TGA TATAA                TATTCAAGTCTCTTG  45 29
GII78_RS00510 NONE
GII78_RS00515   95289 ..   95300 +  -2.2  -3.09516   AACTGGACATCCTGT                CTGC GGAA GTAG                 TTCAGTGGTAGAACA  42 64
GII78_RS00520 NONE
GII78_RS00525   95455 ..   95465 +  -2.4  -3.95435   TGCCGGTTCAAGTCC                 GGCC CTC GGCA                 TTATGTTTTGCGCCC  51 15
GII78_RS00530 NONE
GII78_RS00535 NONE
GII78_RS00540   95889 ..   95905 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 175
GII78_RS00545   97522 ..   97547 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII78_RS00550  100587 ..  100606 +  -9.4   -4.0031   CACCTGTTATCTAGT            TTTGAGAG AATA CTCTCAAA             TTGTTTGGTGGCGAT  85 54
         rrf  100735 ..  100753 + -14.6  -5.63645   CCAAGCAAGCTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTATTTTGG 100 35
        ctsR NONE
        mcsA NONE
GII78_RS00570 NONE
GII78_RS00575  105537 ..  105567 +  -9.9  -2.89602   TATAGAAGACGGAAA       TGAGGCATACA GCATGTAAG TGTATGCCTCA       CTTTCATATCAAGAA  75 41
        radA NONE
        disA NONE
GII78_RS00590 NONE
GII78_RS00595 NONE
GII78_RS00600 NONE
GII78_RS00605  112238 ..  112268 + -14.9   -5.8187   AACCGCGCGGTTAAA      GCGTCTCTGTCATG TTTA CATG-CAGAGACGC       TTTTTTTATTGGGTA 100 248
        cysE NONE
        cysS NONE
GII78_RS00620 NONE
        rlmB NONE
        rae1 NONE
        sigH NONE
        rpmG NONE
        secE  117276 ..  117288 +  -6.9  -5.56673   TATTACTTGCCAAAA                CCCGT TCA GCGGG                TTTTTTATTGTGGCT 100 73
        nusG NONE
        rplK  118547 ..  118576 + -13.7  -3.72027   AATTTGTTTCTTGTC       GGGTTGCGAGTTT TAAC AAGTTCGCAACCC        TTATTCGTGGGAGGT 100 39
        rplA  119477 ..  119497 + -15.5   -4.9792   ATGCTTGTATATACA            GCCTCCATG TCT CATGGAGGC            TTTTTATATGGAATA 100 176
GII78_RS00665 NONE
        rplL  120518 ..  120538 +  -9.7  -5.29846   TTACCTGTAGGGGAA            GCTCGCTTT TAT GAGGCGAGC            TTTTTCTTTGCCATT 100 48
GII78_RS00675  121326 ..  121346 +    -4   -5.8901   TTTGTTTTTGGATGT            GGTTTTCT TAATT AGAAACCC            TTTTTTCTTTTGTCT  90 161
        rpoB NONE
        rpoC  128685 ..  128728 + -14.1  -3.86346   GTTGAATAACTGATT TAACTCTGCTGAAAGACTG CAAAAA CAGTCTTTCAGCAGATATA TTTATGAAAAAGTCA 100 32
GII78_RS00690  129114 ..  129148 +  -8.8  -4.68528   TTTATAACGTACTTT     TGTTTTTGCGTAAGAT TCC ATCTTGTGTAAAGACA     TTGTTTTTTGCCTTT  90 34
        rpsL NONE
        rpsG NONE
        fusA  132329 ..  132346 +  -8.5   -3.2918   TTGTAAGATGAGGAA             GTGAAAG CTTT CTTTCAC              TTCCTATCACTCTAT  70 75
         tuf  133605 ..  133624 + -13.6  -5.72053   TAGTATGATTTTAAA            CGAGACCC CTGC GGGTCTCG             TTTTTTGTTTGCTTA 100 41
GII78_RS00715  134796 ..  134827 +    -5  -4.82901   GAGGTTGCTGACACA      CCCGGCCGCTTTGC CATG GCAAGGTGTTCAGG       TTTTTCTCACGGAGA  74 177
        rpsJ  135179 ..  135189 +  -2.6  -3.34962   GTGTCGATATCGAAA                 TTAA ACT TTAA                 TTCTAAAATATAGAA  46 15
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY  145338 ..  145363 + -10.5  -3.14132   ATTTATGAAAAACTA         GAGGAAATGGA TTTA TCCATTCCCTC          TTAATAAAGAGAGGA  79 25
GII78_RS00830 NONE
         map NONE
GII78_RS00840 NONE
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK  148383 ..  148416 +  -5.4  -3.66666   CTAAACAATGGGGAA     TTTCGGATGGAATC TCATAT GATTCTATTCGAGG      TTTCGACGTTTTGAA  60 138
GII78_RS00865  149392 ..  149412 +  -4.7  -2.55002   CGCAAAGACGATTGA            CTAGTTTCC CTT GTGAACTAG            GATTTTCGTGTGTTT  49 26
        rplQ  149812 ..  149825 +  -3.9  -2.85346   ACGGAGCACCAATGG               CAATT ATCG AATTG                GTTTAATCACATATT  46 6
GII78_RS00875 NONE
GII78_RS00880 NONE
GII78_RS00885 NONE
        truA  153248 ..  153258 +    -4  -3.34398   AAAGTTATAAGATAT                 CATA TGG TATG                 TATTTCAACCCCACG  50 77
        rplM NONE
        rpsI  154226 ..  154248 +   -12  -5.65927   TTACGTTTTCAAAAA           GCTCTCGACC TTG GGTTGGGAGC           TTTTTTCTTTCAATA 100 43
GII78_RS00905  155443 ..  155466 +  -3.1  -5.14563   GTGAAAGTATGAAAA          GCAGCGACCT GTTAG AGGG-GCTGC          TTTTTTCATAACCAA  73 29
GII78_RS00910 NONE
        cwlD  156829 ..  156848 +  -7.1  -4.85396   CACAGAAAAAGGAGA            CCCTCCG GAGTAA TGGAGGG             TTTTCTTGTGGTTCT  83 13
        salA  158004 ..  158022 +   -11  -2.95234   GGTATAAAAGGTGAA             CCGGGATT CCA GATCCCGG             CTTTCCCTTTATTCA  79 34
GII78_RS00930  159445 ..  159459 +  -4.2  -3.40639   ATGTAAAAGAATAAT               GTCTCC ACC GGAAAC               TTGCTTGGTCACATT  50 176
GII78_RS00940  162027 ..  162052 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII78_RS00945  165093 ..  165110 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  165222 ..  165232 +  -2.4  -3.21235   TGTGAGAGTAGGACG                 CCGC CAA GCAG                 ATTTATTAATTCTAC  43 17
GII78_RS00955  165331 ..  165379 +  -5.1  -3.09516   ATCGGTCGTAGGTTC GAATCCTACCTGCGGAGCCATTG CTT CCATAGCTCAGCAGGTAGAGCAC TTCCATGGTAAGGAA  52 6
GII78_RS00960  165444 ..  165464 +    -4  -5.80364   ATGTATTATTACCAA            GGTTTCTC ATAAG GAGAAAGC            TTTTTTTATTGCGAT  90 42
GII78_RS00965  165559 ..  165573 +  -8.6  -3.43564   GTCTTCCGCTCCATT               TATCCC AAC GGGATA               TTGTAAATTGAATTG  73 28
GII78_RS00970 NONE
GII78_RS00975 NONE
GII78_RS00980  166006 ..  166022 +  -2.3   -3.8709   CGCACAACGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 179
GII78_RS00985  167639 ..  167664 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII78_RS00990  170704 ..  170721 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 54
         rrf  170844 ..  170859 +  -6.2  -4.58283   GACGCCGCCAAGCAA              TTACAC GTTA GTGTAA               TTTTTAAAAAAGTTG  76 28
GII78_RS01000  172642 ..  172667 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII78_RS01005  175708 ..  175725 +  -8.5  -4.49556   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  175855 ..  175873 + -14.6   -5.8901   CCAAGCAAGCTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTTATAT 100 35
        sulP  178062 ..  178084 +  -9.2  -5.37043   GCATAAAATAGAGAA           GCCCAGAT GAATGAG ATCTGGGC           TTTTTTATATAACAT 100 35
GII78_RS01020  179124 ..  179143 +  -9.3   -5.1287   GAAAGCATAAAAAAA            CCGCTCA TAGGGT TGAGCGG             TTTTTTCCGTATAGC 100 31
GII78_RS01090 NONE
GII78_RS01095 NONE
GII78_RS01100  193972 ..  193982 +  -2.6  -4.52589   CTCTTGCCGGCACTG                 TTTT TTC AAAA                 TTTTATGTGGAGGGG  60 27
GII78_RS01105 NONE
GII78_RS01110  194157 ..  194179 + -10.7  -5.79595   GCTAGCCCAGTCACA           GACACCTTT GATCA AAAGGTGTC           TTTTTTCTTTTCGGA 100 28
        sigW NONE
        rsiW  195580 ..  195606 +  -8.8  -5.41143   AGTCCGAACGGAGAA         GAGTAAAGCG CGTTAGC CGCTTTGCTC         TTTTTTTGCGGGCTG 100 20
        cdaA NONE
        cdaR NONE
GII78_RS01135  199493 ..  199505 +  -3.4  -4.26938   CACATGTTGTAAAAT                CAAG CTTGT CTTG                TTCTTATTTTCTCAA  59 142
        glmS  201622 ..  201653 +  -8.8  -4.96848   GAGTAATAAATGTTT      AACCCCTTTGGATA AGAT TGTCTAAAGGGGTG       TTTTTATGTCCAAAA 100 35
GII78_RS01145  202279 ..  202295 +  -2.2  -3.82923   ACATAATTGGCTGTC              CAAGGA CCGAT TCCTCG              TATTTTAATTAAGTT  51 505
        adaA NONE
GII78_RS01160  204770 ..  204827 +  -8.1  -3.86307   TTAGTTGAAGTGAAG CCGACAATTTTCAGGATTCAATGATCTA ACA TA-ATCATTGAAATTTTGAAGTTGTCGG CTTTTTTGTTGGAAA  77 370
GII78_RS01165 NONE
GII78_RS01170  209102 ..  209114 +  -4.9  -2.55309   AATGATGAATCTAAG                CATTT ATC AAATG                GATTTGTTATTCAAA  49 39
GII78_RS01175 NONE
GII78_RS01180 NONE
GII78_RS01185  210658 ..  210682 +  -7.2  -5.51402   TGTCGAAAGATCTAA          CATCCGCT GTTGTTATG AGCGGATG          TTTTTTTACATCTAT 100 205
GII78_RS01190  211281 ..  211300 +    -8  -5.00895   ACAGAGATATAAAAA            TAAACATC AAAA GATGTTTA             TTTTTATATCATACA  89 29
GII78_RS01195  212592 ..  212616 + -10.7  -5.47399   TTTCGAAAGATCTAA          CATCCGCTCGT TAT ACAAGCGGGTG          TTTTTTTAGCGTTCA 100 41
GII78_RS01205  213526 ..  213562 +  -8.1  -3.78934   ATTAGGGGATGAGCA    GAGGGAGTTAAAATACA TAC TATATTAAAACTCCCTC    TTCTTCTAAAGACAA  74 40
GII78_RS01210 NONE
GII78_RS01215 NONE
GII78_RS01220 NONE
GII78_RS01225 NONE
GII78_RS01230  221470 ..  221494 + -17.3  -4.89009   CTATAACCATAAAAA          GCAGCTGAACT TTT AGTTCAGCTGC          TTTTTGATTGAATCT 100 86
GII78_RS01235 NONE
        ybdJ NONE
        ybdK NONE
GII78_RS01250  224677 ..  224689 +  -4.8  -5.54403   CAGTGTTAATTCCTC                CAGC CAAGT GCTG                TTTTTCTTCTTTTTT  93 136
GII78_RS01265  227582 ..  227606 + -11.6    -5.252   GTGTGAATTATTAGG          TAAGCTGTTC ATGTA GAACAGCTTA          TTTTTTATGAGAATC 100 27
GII78_RS01270  229288 ..  229307 +  -7.2  -6.20267   AATAACGATAAAAAA            GAGACATT CACG GATGTCTC             TTTTTTTATTTTTCG 100 36
        csgA NONE
GII78_RS01280  229845 ..  229865 + -16.9  -4.89521   TGAGCATGAGATTTA            GAGCCCTGC CGT GCAGGGCTC            TTTTATTTAGGATGT 100 25
        cypC  232110 ..  232134 + -10.1   -4.9445   AAGTTAAATTAAAAA          GCTCTCTTC CTTTATC GAAGAGAGC          TTTTTGATTACTTCT 100 34
GII78_RS01300  234304 ..  234325 + -10.9  -5.48054   AAATAAATAAGAAAA           CCTTGCGAT AGTT GTCGCAAGG            TTTTTTGCTTTTAAT 100 40
GII78_RS01315  237218 ..  237265 + -18.9  -3.03124   TCACTTTCTAACATA TCGTTGACTAAAGCAACTATA TGTGAT TATAATTGCTTTAGTCAACGA TATTAGAAAGTGGGG 100 48
GII78_RS01320  238195 ..  238213 +    -3  -2.61912   ACGGTGGGATTTGGA             GCTGTCAT GAA AAGACTGC             ATTATGCGTGGATCA  41 16
GII78_RS01325  239603 ..  239623 +  -2.6  -3.03159   AACTTTTCTTGAAAA            TGGGTA AACACCAAA TACCCA            TATTAGGCCAATTAA  43 177
        purT  245372 ..  245397 + -14.1  -6.02919   AAAATAGAGTTTGAA         CAGGTCTTGTC ATGG GACAAGGCCTG          TTTTTTTCTTTCTCC 100 34
GII78_RS01355 NONE
GII78_RS01360  246808 ..  246837 +  -7.9  -5.80003   TAGTCTTCAAAGAAT       AGCAGTTTCCTTG ATTT TAAGGGAACTGCC        TTTTTTATTTATTGC 100 24
        cesB  247933 ..  247958 +    -4  -3.21438   ATAATAATAGAATTT         GAATGCTGCT TTTTTT GGGAGCATTC          TATGTTATCATGCTT  48 93
        pssA NONE
GII78_RS01375 NONE
GII78_RS01380  249861 ..  249885 +  -6.4  -5.40072   TATGAAGAGTAAAAA         GAGGAGCTTGC AAAC GCA-GCGCCTC          TTTTTTTGAAGAAAG  91 29
GII78_RS01385  250190 ..  250209 +  -7.2  -6.13503   GAGAATCCAGCTAAA            GCTTCTTT CAAC AGAGAAGC             TTTTTTTTGTTGGTA 100 27
GII78_RS01390 NONE
GII78_RS01395  251591 ..  251613 + -12.8  -5.76633   TGCTGAATAAAAAAA           GAACACCTCG TAT TGAGGTGTTC           TTTTTTTCTATATGC 100 31
        gamR  256579 ..  256635 +  -5.3  -4.16307   GAACGAAATTCACCG TAGAACAGTCATATCATTCATAAAGCA ATG TGTTTTAAGAAGGGAATGGTGGTTCTA TGTTTTTATTGACGA  65 3
GII78_RS01420  256917 ..  256937 +  -8.3  -5.41941   GCGGTCTAAATCAAA            CAGCCAG AATAAAA CTGGCTG            TTTTTCTTTAATTTC 100 32
GII78_RS01425  258202 ..  258223 + -14.5  -5.48213   GTGAAAATCGAAAAA           GAACCTGCC CGGA GGCAGGTTC            TTTTTATTTTGAATG 100 37
GII78_RS01440  260797 ..  260825 +  -7.4  -4.83722   AACGCAAAAAGAGAA        AGGTGTTCAGCC CATAT GTCTGAACACCC        TTTTCTTATGATATT  83 3
        glnK NONE
        glnL  265769 ..  265787 +  -6.7  -5.52384   AGGATATAAACCAAA            CAGCC-GG CTGA CCAGGCTG             TTTTTTTGCTGCGCA  93 32
        kdgD NONE
GII78_RS01470  268417 ..  268444 + -10.6  -2.91276   GAAGCCGTAATGGTG        CTGGAAAGAGGC GTGC GTCTCTTTCCCG         GTTTATCACAACCAG  77 31
        gudP NONE
        gudD  271255 ..  271267 +  -2.7   -4.0127   CGGAAGCGTCCATGT                CTTGT GCG ATAAG                TTTGATTGTAAATAT  55 14
GII78_RS01485  272048 ..  272073 +    -4  -5.40072   AATAATGGTGAGCAA         CCGCAGTT GAAACGTAAG AGCTGCGG          TTTTTTTAAAACCAA  78 36
        garD  273856 ..  273872 +  -3.6  -5.31456   GGTTATCAAAAAAGA              GGGTGG CGTGC CTGCCC              TTTTTTGTGCCTTCA  78 220
GII78_RS01495  275149 ..  275174 + -12.6  -5.61913   GGTGGTACCGCGAGA         CCCTCGTCCT TTGCAT AGGACGGGGG          TTTTTTGTGTTTCTT 100 316
        rtpA  275830 ..  275847 +    -7   -4.1585   GTCGTGACCGGAAAA             GGTCCT CAATTC AGGACC              TTTTCGCAGTTCTGG  73 434
        ycbL NONE
        ycbM  278096 ..  278114 +  -2.4  -3.55444   CGCATGACATATTAA             TCGTAAGA ATT TCTTAAGG             TTTGAGAAATAAAAA  47 26
GII78_RS01520 NONE
GII78_RS01525  279841 ..  279863 + -13.4  -3.81339   CCAATATGTATAAAA           GGCCGATGCT GTC AGCACCGGCC           TTTCCATTATGAGTC 100 51
GII78_RS01540  281007 ..  281027 + -14.1  -5.27335   ATTTTAGAGACAGGA            CACCGTTCA AAT TGAACGGTG            TTTTTCTTTGAAAAG 100 34
GII78_RS01545  281847 ..  281876 +  -7.2  -5.86609   ATAACTGATAAAGAG       CGCTGAGTCATT CTGCGA AATGGCTCGGTG        TTTTTGTTTTTTTAA 100 37
GII78_RS01550 NONE
        phoD NONE
       tatAD  284097 ..  284119 + -13.5  -5.60993   GGGCTGAATGCTGAT           GAGGCAGAC ACCGG GTCTGCCTC           TTTTTTTATGAAAGG 100 34
        tatC  284930 ..  284983 + -11.8  -4.51847   ATTGTGCGGCCGTAA CAGCGGCGATTCTCAATGCCCGGACA ATCG TGTCCAGGC-T-GAGGCTCGGCGCTG TTTTGTCGATTGTTT 100 78
GII78_RS01575  286870 ..  286884 + -11.4  -2.64666   AAGCTTGTGGGATGA               CTGCCG GAT CGGCAG               GGTTTTTAACTGTAC  77 183
GII78_RS01590  290149 ..  290166 +    -7  -5.91981   GAGTATTGAAGAAAA             GAAGGC GAATAA GCCTTC              TTTTTTTTGGCTTTT 100 32
        lipA  290956 ..  290980 + -14.5  -3.93216   TAATGAAAAACAAAA          CCTTGAAGAAT GCT ATTCTTCAAGG          TTATTCTGCTTTCAG 100 38
GII78_RS01605  292685 ..  292709 + -15.9  -6.02919   TCATAATGAAAAAAA          CCTTGAAAAGC CGG GCTTTTCAAGG          TTTTTTTATTTCTGA 100 35
        natA NONE
        natB  296441 ..  296459 +  -7.5  -5.05601   AATAAACTTGCGAAA             GGAGAAA TACAC TTTCTCC             TTTTTGTATATCCTG  89 36
GII78_RS01630  297494 ..  297534 +  -9.2  -5.02606   TCAGCGACATTTTTA  AATAAAAAGGAAATAGCC GTCAA GGCTATTTCCTTTTGGTG  TTTTATTCTTTGATG 100 21
GII78_RS01645  300448 ..  300478 + -14.2  -5.00895   ACAATAATAGAAAAG       GACCTTTCTTCACT TTA AATGAAGAAAGGTC       TTTTTATATAATAAA 100 123
GII78_RS01650  302053 ..  302064 +  -4.4  -3.83561   TTCCATATCCCATAT                GATG CTTC CATC                 CTTTTTTTGAAGGGC  58 180
        rapJ  303660 ..  303682 + -12.8  -5.70829   TTTCAATAGGAAATG           GCAGAGAACT ACA GGTTCTCTGC           TTTTTTTGTGCTGTT 100 32
GII78_RS01665 NONE
GII78_RS01670  306259 ..  306277 +  -8.8  -5.53991   TAATGATTGAAGTAG             CCCGGC ATTTTTA GCCGGG             TTTTTTTAGTACATA 100 38
GII78_RS01675  307396 ..  307421 + -14.1  -4.55295   GGTTAAATCATAAGA         TAGTGTGCGCC GGAG GGTGCACACTA          TTTCTTTGTGAGAAA 100 28
        znuC NONE
        znuB  308952 ..  308975 +   -14  -5.61596   CCGATAACATGAAAA          GCAGTTTTCC CTAG GGAAAACTGC           TTTTTTTATAGAAAT 100 34
GII78_RS01695 NONE
GII78_RS01700 NONE
GII78_RS01705 NONE
GII78_RS01710  312911 ..  312933 +  -4.8   -5.4505   AATAAAACAAAACAA           GGAGGGAGGT TCA ATGTCCTTCC           TTTTTTGTTACCGAA  88 36
GII78_RS01715 NONE
GII78_RS01720  315709 ..  315737 + -13.9  -3.77219   TGCAGCAATAATAAA        AACCCCGCTTGTG GAA CATAAGCGGGGTA        TTTCAATTACATCAT 100 30
        niaP  317247 ..  317271 + -10.2  -4.38154   GAAAAGATGACAAAA          TCCTAAAATG AAAAC CATTTTAGGA          TTTTGTCAACAATCT  91 244
GII78_RS01740 NONE
GII78_RS01745 NONE
       opuAC  322144 ..  322163 + -13.6  -5.15969   TAAATAATGGAGAAA            GCAGCCTG TAGC CAGGCTGC             TTTTTTGCGTTAAGA 100 34
GII78_RS01760  324916 ..  324938 + -13.4  -4.36729   GTTTTAACGATTGCT           GCCCGCCG GCTTGTA CGGCGGGC           TTTTGAGTTATTCAT 100 34
GII78_RS01765  325502 ..  325529 +    -5  -5.95539   AGAAGAAATAAAAAA        GAAATCATCT TGAAAAAT AGATGGTTTC         TTTTTTTGTTTGGAA  91 13
        amyE  327781 ..  327801 + -12.7   -5.5112   CGGGACTTACCGAAA            GAAACCATC AAT GATGGTTTC            TTTTTTGTTCATAAA 100 54
GII78_RS01775 NONE
GII78_RS01780  330548 ..  330598 +   -18  -4.29621   TGCAAGATTAGGAGT GTAATAGAAAAAAGCAGTACATGC CCA GCATGTACTGCTTTTTTATGTTAA TTTGCTTTCTTTGTC 100 22
GII78_RS01790 NONE
GII78_RS01795 NONE
GII78_RS01800  334256 ..  334279 +  -5.2  -5.53991   ATAAATCAAGGACTG          GCAGGGCGAT CTTT ATGACCCTGC           TTTTTTTGATAGATC  88 37
GII78_RS01810  336298 ..  336309 +  -2.2  -2.78504   GTGACATCCATACGG                GTTG AAGT CAGC                 TGATCTCTCTTGTTC  41 11
        nadE  337271 ..  337289 +   -16  -4.50976   AATAAGTTGAAGAAA             GCCCGCTC TCG GAGCGGGC             TTTTGTCGTGTACAG 100 36
GII78_RS01825  338734 ..  338774 + -22.1  -4.49939   GGGATCTTTATCAGC  CGATGTAAAAAGCCGTGCG CAG CGCACGGCTTTTTTTATCG  TTTTATCCCTTGTAT 100 18
GII78_RS01835 NONE
GII78_RS01840  341664 ..  341684 +  -5.3  -5.60993   GATAAATGTGAAAAG            CCGCCGCAT ATC ATCAGGCGG            TTTTTTTCTGCAAAC  88 39
GII78_RS01845  342508 ..  342533 +  -2.6  -4.67256   GTGTGGAAGGATGGA         GGAAGCTGATG TTTTT TGTC-GCTTCC         TTTTCTCCTTTATTC  62 17
GII78_RS01850 NONE
        pruA  345193 ..  345219 +  -8.7   -3.7829   CTAAGCGGGACTAAA         TGGGCATCCTC CCTGC GGGGGTGTCCA         TTTCATCCATATACT  78 37
        putP  346732 ..  346770 + -16.2  -3.08032   GTCACAATAAAGATC   GAAAGGAGGAGGAAGGGG CTG TCCCTTTTTCCTCTTTTC   TCCTTTTAAGCGGCC 100 31
        putR  348123 ..  348138 +  -7.6  -3.94853   GAAATAAAAAAGAAA              CCAGTA CTTG TACTGG               TTTCGTCTTCACTTA  74 34
        ffoR  352233 ..  352246 +  -3.8  -3.61715   CACCATTGATCAATT               GCTG AACGGA CAGC                TTGTTCGGGCAAATG  53 242
GII78_RS01915  362300 ..  362319 +   -10   -5.8901   TTTAGGATTTTGACG            GACACGCG TTTG TGCGTGTC             TTTTTTATTTTCTCT 100 36
GII78_RS01920 NONE
GII78_RS01925  363948 ..  363960 +  -4.1   -4.4767   CCATACGATTTAAAT                CGTAA CAA TTGCG                TTTTGTGGTAAATGG  63 72
GII78_RS01930  364317 ..  364330 +  -3.9  -3.29461   GTAATCATTCTATTT               TAATG GAGG CATTA                TTATGAAAAAAATTC  50 37
        zinU  365534 ..  365553 +   -10  -5.52384   ATCAATAGAAAAAAA            GCCG-TCCC CTG GGGAGCGGC            TTTTTTTAATGAAAC 100 33
GII78_RS01950 NONE
GII78_RS01955  367946 ..  367977 +  -8.2  -4.87665   TGCTGACGAAGAGAT      TAGAAAGAGCGA ATAATGGA TCGCTCTTTTTA       TTTTTATGCATAAAA  95 10
GII78_RS01960  368384 ..  368405 +  -9.5  -4.39407   ACATTAAGATTTTAA           GCATCCAAT GGGA ATTGGGTGC            TTTTGCGTTATTTAC  91 34
        bglC  369965 ..  369989 + -12.2   -4.8622   AAAGTTTATAAAGAG          TCCCTGAGAG TTATT CTCTCAGGGG          TTTTTCATTACACAG 100 30
        hxlR  374662 ..  374682 +  -8.3  -5.91981   AAAGAATCGTTGTAA            GACGCTCTT CGC AAGGGTGTC            TTTTTTTTGCCTTTT 100 26
       srfAA NONE
       srfAB NONE
       srfAC NONE
       srfAD  401387 ..  401409 +  -9.9  -5.80817   CAACCGTGATCAAAA          GCGG-ACAGC TTCG GCTGTTCCGC           TTTTTTTGTGTTGAA 100 32
GII78_RS02020  402710 ..  402734 + -11.5  -4.81851   CCATTCAATATAAAA          GGATCAGCACT GTC AATGCTGATCC          TTTTTAAATTTGAGT 100 28
GII78_RS02035  406163 ..  406179 +  -7.9  -2.53613   GCGTCGGGAAGATCA              GGGATGC ACG GCTTCCC              GTATTCCTGTGTGCT  59 459
GII78_RS02070  411413 ..  411432 +  -3.6  -2.73635   AACAAAAAGGAGGAG            CTTGATCA TGGC TTATCAAG             ATTTCAGAGAATTTC  45 21
GII78_RS02075 NONE
        bsdD NONE
GII78_RS02085  413555 ..  413575 + -11.1  -5.74122   ACGGTAATATCGATA            GCCTGACAC CAT GCGTCAGGC            TTTTTTTATATAATG 100 34
GII78_RS02090  414463 ..  414490 + -15.6   -4.1021   TTGATCAATAAAAAA        CAGCCCGCAGAT CAAC ATCCGCGGGCTG         TTTCTGATTATAAGA 100 30
GII78_RS02100  418016 ..  418033 +  -4.7  -5.89947   TATCGTCTGAAAAAA             GCGCCCC TCTA GGGGTTC              TTTTTTTTCGATTTA  91 31
       gerKA NONE
       gerKC NONE
       gerKB  422371 ..  422395 +  -8.5   -5.1167   AAAAAATGATAAAAA          GAGCGGGGG GATGCGG CCGCCGCTC          TTTTTATGTTCACTT 100 32
        yclJ NONE
        yclK  426937 ..  426963 + -14.5  -5.00616   AGCAATAGCATACAG        GGCGGC-GCATC AACT GATGCAGCCGCC         TTTTTTGCACACCGC 100 33
        rapC NONE
        phrC  428354 ..  428377 + -12.5  -5.45802   TGACGTAAGAACAAG          CCCCTTCTC ATTAGC GAGAAGGGG           TTTTTCTTTTCAAAA 100 33
        yclN NONE
        yclO NONE
        yclP NONE
        yclQ  434259 ..  434297 +  -2.7   -5.0095   GAAGTAAAATAAGAA CCCGATCTATAGAATCTG TTAATT CAG-T-CTA-AGATCGGG  TTTTGTTATGTTTTT  68 34
GII78_RS02190  435438 ..  435455 + -11.3  -4.62069   ATAATTATATAAAAA             CAGCCCT GAAC AGGGCTG              TTTTTAGCGTGCCGG  95 51
GII78_RS02215  439452 ..  439467 +  -6.1  -5.72616   CCGCTGGTGAATCAA              TCCCC TGTAAC GGGGA               TTTTTTTATGTCCGT  91 31
        gabT  442279 ..  442298 +  -4.2  -2.56164   TGAAGGGCTCAGCAT            CTTGGAGG CGGG CCTGCGAG             CTTAATCATTGGAAA  47 1
GII78_RS02230  443779 ..  443803 + -20.1   -5.0916   AATGCACGCTCCTGA          GAGCTGCCGGA TTT TCCGGCAGCTC          TTTTTGTGTTCCGGC 100 44
        glcU NONE
GII78_RS02240  445561 ..  445587 +    -8   -5.4505   GGTTAAACAAAAAAA         GCGACCCAGA CATCACA TCTGGATCGC         TTTTTTATTACGCAC 100 35
GII78_RS02260  448964 ..  448983 + -13.6  -5.61881   AGAGGAAAGAGAAAA            GGCTCCTG AAAT CAGGAGCC             TTTTTATTTTTAAAA 100 17
GII78_RS02265 NONE
GII78_RS02270 NONE
GII78_RS02275  452166 ..  452188 +   -12  -5.60864   AATCAATAACCGACC           ACCCGTGACA CAA TGTCACGGGC           TTTTTTTACTATCTC 100 32
GII78_RS02280  453315 ..  453353 + -19.7  -3.90291   TTAAGAAAGCTCTGA  TGAATCAGGCCGGGGCAG ATGG CTGCCCCGGCCTG-TCCA   TTTCCTTACGAAAAT 100 26
        lepB  454091 ..  454116 +  -8.2  -5.31275   AAAATGATGATGAAA         CGGTGCGGAG CCGGCT TTCCGCCCCG          TTTTTTATGATAGAA 100 105
GII78_RS02295  455164 ..  455187 + -11.8  -4.05861   GAAAAATGAAAAAAA          CCCTTCACAA CATT TTGTGAGGGG           TTCTATTTTGTGTCG  91 32
GII78_RS02305  456242 ..  456263 + -10.2  -5.37593   GGTACTATAAAAAAA           GAGAGTCC TAAGAT GGACTCTC            TTTTTTAGTTTGGCA 100 31
        pxpA NONE
GII78_RS02315 NONE
GII78_RS02320 NONE
        pxpB NONE
GII78_RS02330 NONE
GII78_RS02335 NONE
        lipC  462487 ..  462524 +   -18  -2.79679   AAGAATTATCAGTTT   CATAGAAAACGCGCCT CATGAC AGGCGCGTTTTTTATG    TGTGATCGAAATATT 100 21
GII78_RS02345 NONE
GII78_RS02355 NONE
GII78_RS02360  466366 ..  466387 + -13.1  -4.76312   GATATTCCATAAAAA           GCATCAGCT TACC AGCTGATGC            TTTTTCAATATTGTC 100 29
        mtlR  468643 ..  468666 + -11.8  -4.99035   TGTAAACCTGCATGG          CACACGTCAA AAAT TTGGCGTGTG           TTTTTCTGTGGATGG 100 36
GII78_RS02370  470361 ..  470390 + -14.4  -3.66178   ACATTCATAAAAGAA       GAAGCCCGTCCAC TTTAT GTGG-CGGGCTTC       TTTGCAGTTGCACAG 100 31
GII78_RS02380 NONE
        lyxE  472507 ..  472528 + -14.5   -5.0916   GATCCAAGAATATAA           GGATGGGCT TAAC AGCCCATCC            TTTTTGTATTGAAAA 100 26
GII78_RS02390 NONE
GII78_RS02395  474039 ..  474060 + -12.9   -5.7946   AAAGAATAAGACAAA           CCGCCCGGC GTAC GCCGGACGG            TTTTTTTATTGCAAA 100 421
         amj  474966 ..  474988 + -13.5  -4.68506   GGTTTTAATAAGAAA           GGCTGGATC ATAAA GATCCAGCC           TTTTTGCGCTTCCTT 100 33
        lrpC NONE
        topB  478168 ..  478186 + -10.3  -5.52986   TAAATAATAAAAAAA             CCTGTGC CTATC GCACAGG             TTTTTTTAGTGGACT 100 34
GII78_RS02420 NONE
        epsK NONE
GII78_RS02430 NONE
GII78_RS02435 NONE
GII78_RS02440  485377 ..  485397 +  -9.7  -6.20267   AGATACAGAATAAAA            CAGAGGCGA TTT TAGCCTCTG            TTTTTTTATTTTTGG 100 28
        kimA  487677 ..  487700 + -12.5  -5.00616   AAAAGTAAAGCTCTA          GGACCAAGG GAATCA CCTTGGTCC           TTTTTTGCGGGAAAA 100 33
        mutT  488190 ..  488201 +  -2.2   -4.0348   TGATTCAGGTCTCCG                GGTT TTAA AGCC                 TTTCTCCTGTGGTAT  53 38
GII78_RS02455  489974 ..  489994 +  -8.9  -7.14698   GTTATTTTAAAAAAA            CAGGGGCCC TAA GAGCCCTTG            TTTTTTTTTTTTTTT 100 31
GII78_RS02485  493804 ..  493829 +  -6.1  -5.52384   ATGGAATAGCAGAAA         GCAGACGGA CACCGCGA TCCGCCTGC          TTTTTTTAGTGGAAA  91 32
GII78_RS02490  494335 ..  494360 + -12.6  -5.79526   CCTGTAAATAAAAAA         GCGATCCGGC ACATCA GCTGGATCGC          TTTTTTTTGGAATCT 100 63
GII78_RS02495 NONE
GII78_RS02500  495129 ..  495151 +   -15  -3.78419   GAAGGCATAATCAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTCTCTTTACTCG 100 31
        dctS NONE
        dctR NONE
        dctA  500860 ..  500878 +  -8.8  -5.73672   AGTCTGAAAAAAGAA             CGGCCC ATCCATG GGGCCG             TTTTTTTAATTGTTT 100 34
GII78_RS02530  502271 ..  502300 + -12.3  -5.24129   ACAAATGCTATAATA       CAAACAGTGCCTA ATGT TAGGCACTGTTTA        TTTTTTGTCGAAAAA 100 244
GII78_RS02535 NONE
GII78_RS02540  504059 ..  504070 +    -3  -4.63479   GCTCACGTAAATCAA                TATC ATTT GATA                 TTTTGGTTTATACTA  62 69
GII78_RS02545  504447 ..  504473 + -16.6  -5.67063   CAAATCCTGTGTAAT         CGCGCTGTTCCC TTG GGGAACGGCGTG         TTTTTTTATACTGGA 100 27
GII78_RS02550  505726 ..  505740 +  -7.1   -5.1383   TGAGTCATAAAAAAA               GAGCC TAGCC GGCTC               TTTTTATGTATTGTT  90 31
GII78_RS02565  507280 ..  507291 +  -5.8  -3.50466   TGAAAATAAGCAGGC                TGGG AATG CCCA                 TTACTTGGTATTTTT  57 144
GII78_RS02575  508746 ..  508767 +  -7.3  -5.08169   TCTAATGAAGAAGGA           CACTGCC GGTAAAAG GGCAGTG            TTTTTTCCCGTATAT  90 36
        murF  510385 ..  510424 +  -8.6  -2.63073   TCTTGGGAGCGGATG  GAGCAGCAG-CCGGCATAT TCG AGATGCCGATCTGCTTCTC  ATCTTATTGAAAAAC  68 230
        cshA  512082 ..  512104 +   -15  -5.47159   TTTGATCGATTCAGA           GCCCAAAACA TGA TGTTTTGGGC           TTTTTTATGTTCGCG 100 41
GII78_RS02590 NONE
GII78_RS02595  514178 ..  514198 +    -9  -4.52949   TACTCATATGAAAAT           GCGGACGGT TAAT ACCG-CCGC            TCTTTTTTTTGCACG  90 14
        acpS NONE
GII78_RS02610  516436 ..  516454 +  -8.9  -5.63103   GAAATAACCGCCAAA             GGCCAAA CATGA TTTGGCC             TTTTTTTCGTTAGAC 100 34
         alr NONE
        endB NONE
        ndoA  518476 ..  518494 +  -8.9  -6.09196   TAGACATATTTGCAG             GTTGCTC AAATA GAGCAAC             TTTTTTTGTTTTCAA 100 38
       rsbRA NONE
        rsbS NONE
        rsbT  520157 ..  520169 +  -7.7  -3.05816   GGAACAGAGATACAA                GCCAT CAA ATGGC                TTCGGTAGGAGGTAA  65 5
        rsbU NONE
GII78_RS02650 NONE
        rsbW NONE
        sigB NONE
        rsbX  523436 ..  523455 + -13.6  -5.81032   GAATAAGAACAAGAA            GAAGCCGG AATG CCGGCTTC             TTTTTTTTGCGGTTG 100 42
GII78_RS02670 NONE
GII78_RS02675 NONE
GII78_RS02680 NONE
GII78_RS02685  524830 ..  524845 +  -6.8  -5.82281   ATGAGTAAAGATACG              GGCAGC GCCA GCTGTC               TTTTTTTATGTGTTT  93 33
GII78_RS02690  527079 ..  527096 +  -9.9  -5.21709   ATGGTAAAATAAAAG             CACTGCT TACG AGCAGTG              TTTTTTCCTATAGAA 100 29
GII78_RS02700  527845 ..  527867 +  -5.6  -3.01745   CTTGACACTGCAAAT           CAAGGCTGAT ATA ATAAGTCTTG           TCTCATTATTCCACA  53 116
GII78_RS02705 NONE
GII78_RS02710 NONE
GII78_RS02715 NONE
GII78_RS02720 NONE
GII78_RS02725 NONE
GII78_RS02730 NONE
GII78_RS02735  528670 ..  528694 + -13.7  -3.00946   TTTGTGACTAAAACT          GACCACTTACT TTA AGTAGGTGGTC          TGATTTGTCCGCAAA 100 102
GII78_RS02755  531539 ..  531550 +  -4.4  -2.80699   TATCGGAGATGACCT                CCAA TGGT TTGG                 TAGTATTCATTACAA  48 226
GII78_RS02760  532567 ..  532577 +  -5.4  -3.04263   TTAATTTTGTTATGT                 TCCA GAA TGGA                 TGTTGGGAATAACCT  52 499
GII78_RS02775  534887 ..  534913 + -10.3  -5.71712   ATCCTAACAAAAATT         GAACTAGTTAC TTTGT GTGACTAGTTC         TTTTTTTGTCTAAAA 100 40
GII78_RS02785  537103 ..  537115 +  -4.1  -4.08064   TTATGTGCACTAATT                TTGTG CGA CACGA                TTTTCCCGAAAGATT  58 253
GII78_RS02790 NONE
GII78_RS02795  538939 ..  538967 + -14.1  -5.55769   TAGCTAATTTTAAAA        TCACTTTGTCTTT ATA AAGGACAAAGTGA        TTTTTTGTTATACAG 100 34
GII78_RS02800  539560 ..  539587 +   -10  -4.51994   CATAAAGTTGGGAAA        GAAGGATGTTAC TTAT GTAGTATCCTTC         TTTATTATTCCTTGA  91 45
GII78_RS02805 NONE
        cspC  540967 ..  540988 +    -8  -5.77988   AATCGTTTATACAAA           CAGGCTCT TTATAT AGGGCCTG            TTTTTTTATGTCTAT 100 46
GII78_RS02830  545795 ..  545820 +  -9.8   -5.4505   CGGCAATATCAAAAA         TACCAAGGGT TTTGAC GCCCTTGGTA          TTTTTTCTTCAAGAA 100 104
GII78_RS02840  548340 ..  548365 + -10.6  -5.30686   TACCTAATATTGTTT         GCCATACAAT TATGAC ATTGTATGGC          TTTTTTGTGCGTGTT 100 34
GII78_RS02845  549747 ..  549760 +  -2.5  -4.51763   AAAGGATAGGATTGT               TTAAT TTAC ATTAA                TTTGTTATATTGTTA  60 39
GII78_RS02850  550391 ..  550408 +  -7.7  -5.95946   AATTATACAAGAAGA             GAAGGCT TGTG GGCCTTC              TTTTTTTGTTGTTGC 100 78
GII78_RS02855  551236 ..  551255 +  -6.5   -5.7946   TCTATAGAAGAAAAA            CAAGCAT AGTAAG ATGCTTG             TTTTTTTCTTAGGAC  93 93
GII78_RS02865 NONE
GII78_RS02870 NONE
GII78_RS02875  554741 ..  554766 +  -9.1  -5.64421   ATTGTGTATATAAAA         GCTTATGGAGG AAAG TTTCCATAAGC          TTTTTTCTTTAGAAT 100 28
GII78_RS02880  555574 ..  555605 + -13.2  -3.27653   TCTTTCGGTATCCAA      TAATACCGAGGGTA TAAC TGCCCTTGGTATTA       TGTTCTGCTGCACCT  95 95
GII78_RS02890  557015 ..  557035 +  -9.7  -5.31456   ATCGCATACAAAAAA            CCAAGGGTT GCT GGCCCTTGG            TTTTTTATACCTTCA 100 123
GII78_RS02900  559599 ..  559618 +  -5.1  -3.99436   CCAGCCCACGATATG            TCTGTTT AGCGAA AAACAGA             ATTTTTTATTTGCTC  61 131
GII78_RS02905  560121 ..  560137 + -10.8  -2.52543   ACGATAACTCAGAAA              GCCCGC TTTTC GCGGGC              TCGATTGAAGCAGAT  77 34
GII78_RS02920  562387 ..  562412 +   -12   -5.4111   TCTGAATCACAGAAA         TACCAAGGGT GTCAAA ACCCTTGGTA          TTTTTTCTGGTTATT 100 136
GII78_RS02930 NONE
GII78_RS02940  565745 ..  565757 +  -4.1  -3.34962   GCTGAGCGGAATCGA                GGGAA AAG TTCTC                TTATCGGATGTCGAA  50 121
GII78_RS02945  565952 ..  565971 +  -7.8  -5.21709   TACTTGCAATGTAAA            CAGGCCTC TAAA GAGACCTG             TTTTTTAATATCCAG  93 27
        aseR NONE
        arsB  568296 ..  568326 + -13.4  -5.77734   CAATGTGTTGTTCAA       CAGGTGTCTGCG AGCTGAG TGCAGACACCTG       TTTTTGTTTTTATTT 100 385
GII78_RS02965  569246 ..  569267 + -11.7  -5.79595   AGAACCTTAAAAGGA           GATACCAAC CGAT GTTGGTATC            TTTTTTGTTTTAGAG 100 51
GII78_RS02985  573316 ..  573349 + -13.4  -4.20868   GAGGCACGATATCTA     GGAGGAGTAAGATT TGTTCT AATCTTACTCCTTC      TTCTTATTTTGAAGC 100 68
        ydfH NONE
        ydfI  576354 ..  576373 +  -6.5  -5.73563   TGAAAATTGCCCAAA            CGTACAT GCCCGA ATGTACG             TTTTTTTCATTTCAT  93 51
GII78_RS03015  578627 ..  578646 +  -7.9  -5.50499   TGTGTAATAGAAAAA            GCAGATC TTTAAT GATCTGC             TTTTTTTGCATATGG 100 34
GII78_RS03040 NONE
GII78_RS03045 NONE
GII78_RS03050  585289 ..  585317 + -10.4  -5.10163   TACGAAAGTATGTAA        GAACAGTTGCTG CTTGT CGGTAACTGTTC        TTTTATTTTGACATT 100 41
GII78_RS03055  585816 ..  585831 +  -7.6  -5.95946   AATAAGGCAAAAAAA              GAACTC AAAT GAGTTC               TTTTTTTATTCTTCA 100 44
GII78_RS03075  588789 ..  588817 +  -3.9  -4.32857   TAAACAAACGTAGAA       GCTTCGGAATCA AAAAAA TG-TTCCGGGGC        TTTATATTTGAGCAC  64 356
GII78_RS03095 NONE
GII78_RS03100  590861 ..  590878 +  -6.9  -5.60993   ATTTCTGCGTTATTC             GTCCGGC ATCA GCTGGGC              TTTTTTTATAAAGGA 100 145
GII78_RS03125 NONE
GII78_RS03130  598858 ..  598879 + -11.7   -5.1675   GAGTAATCGAGAGAA           GAGTGATGA ATGG TCATCACTC            TTTTTTCATGACTAA 100 35
GII78_RS03145  601655 ..  601685 +  -9.9  -4.88918   AGGGCAGAATTCATA       AAAAAAACCTGAC ATGAC GTCAGGTTTTTTG       TTTTATTTAGAATAA 100 25
GII78_RS03155  603366 ..  603392 +  -8.1  -5.80248   ATTTCTATGATCCGG         TACCAAGGG AGAGCAGAA CCCTTGGTA         TTTTTTTATGTATTC 100 40
GII78_RS03160  604746 ..  604765 +    -5  -5.95166   AAAAGTGTAAAAAAA            GACACC AGAGCTTG GGTGTC             TTTTTTTTGATTAAG  91 31
GII78_RS03165  606095 ..  606121 + -19.6  -3.52918   AACAAATAAGAAAAA         GAACTCCCGTAC CTT GTACGGGAGTTC         TTGATTTAAAACTTG 100 32
GII78_RS03180  609172 ..  609190 +  -3.8   -3.2614   CTTCAATCGTAATAT             CATGGCCT TCA AGCTCATG             TTCATCTAACCGCTC  48 204
GII78_RS03195  611135 ..  611152 +    -4  -5.32699   TCTTAAATCAATAAA             TGCCGC CTGACA GCGGCC              TTTTTTCATGTTTGG  78 27
GII78_RS03200  611901 ..  611920 + -10.8  -5.66989   CTAAATAATAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTTTG 100 33
GII78_RS03210 NONE
GII78_RS03215 NONE
        celB NONE
        gmuD  616792 ..  616803 +  -2.2  -2.69699   TGGTTCAAAACAGTT                GCTG AGCA TAGC                 GGTTTTTAGATTTTC  40 5
        gmuR NONE
        gmuE  618590 ..  618608 +  -3.8  -2.53831   GGCAGCATCCGGGGA             GGTGCG ATCATGA CGCATC             CATTATTTTTAGAGC  45 13
        manA NONE
        gmuG  620670 ..  620709 + -10.8  -2.53911   TCCGTAATGTCACAA  TTAAGAAGGTGCTCAAGA AGTT TCTTGAGCACCTTCCCAC   TGGATTAAGCATTCA  77 42
GII78_RS03255 NONE
GII78_RS03260  622057 ..  622068 +    -3  -2.61144   TCTCATCACCCGCTC                CATT ATTG AATG                 ATCTTTGAAAACTAA  41 23
GII78_RS03265  623834 ..  623859 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII78_RS03270  626899 ..  626918 +  -9.4   -4.0031   CACCTGTTATCTAGT            TTTGAGAG AATA CTCTCAAA             TTGTTTGGTGGCGAT  85 54
         rrf NONE
GII78_RS03280 NONE
GII78_RS03285  627327 ..  627346 +  -5.7  -4.62441   TTTACTGTATCTTCT            GCTTGGT GTCATA GCCAAGC             TTTCTTTATATCGGG  73 87
GII78_RS03290 NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD  631069 ..  631093 +  -7.2   -5.1634   TGACTTCTTATAAAA          GTCTCACG AGATAATAG CGTGAGAC          TTTTTATATGTTTGT  90 12
        moaC NONE
GII78_RS03325 NONE
       tatAY NONE
        tatC  635492 ..  635525 + -12.7  -4.63526   TTCTGGGCAATAATA     AAAAATCCATTTCTC ATGC GAGAAATGGATTTTC      TTTATTTCTGGTTCT 100 28
GII78_RS03350  636955 ..  636972 +  -2.7  -3.67597   CGTGAAAGCGACATT             TTAGCTG TTAT TGGCTAA              TTCTTAAATAAACAA  50 8
        groL  638735 ..  638773 + -18.4  -5.82281   CATTTATAAATTTTC   GAGGCTTCTCATGAGTTC ACT GAACTTGTGAGAAGCTTC   TTTTTTTCTGTCTTT 100 110
GII78_RS03380  642660 ..  642677 + -11.3  -5.64274   TCGGTTGAAAAACGA             CGCTCCT ATAT AGGAGCG              TTTTTTTATCACTAG 100 33
        gutB  648431 ..  648452 +  -6.6  -3.59252   ATCGCTGAGTGAACA           GGGAGGAT CTTCGT ATTCTCCC            TCTTGTTTACTGGAA  64 33
GII78_RS03410 NONE
GII78_RS03415  650955 ..  650991 +  -2.4  -5.87996   TTGTAAATCATTGAA   GATGTTTCTTGAAAGTC TTTG GACTTTTGGGGG-CATC    TTTTTTTATTGCTTA  83 35
GII78_RS03420  651832 ..  651858 + -14.4  -3.27674   ATAAGTAATACATAG         GAGGCCGCAGCT CTC GGCTGCGGCGTC         ATTTTATCATAAGAT 100 33
GII78_RS03425 NONE
GII78_RS03430 NONE
GII78_RS03435  654699 ..  654723 +   -10  -5.63517   ATCATACAGTGAAAA          GTCCGGAGTG ATCAG CACTCGGGAC          TTTTTTATTTAGGAG 100 43
        iolT  657769 ..  657792 + -15.4  -4.99134   GGATAATTTAAAAAA          GAATCCGCAC CCGA GTGCGGATTC           TTTTTGGTTTCAAAT 100 35
        walM  659678 ..  659697 +  -6.5   -5.1244   TATATAATCTGGAAA            GCAAGAA GTGACA TTCTTGC             TTTTTCTATTGGTGG  86 47
GII78_RS03460  660775 ..  660796 + -12.3  -5.53991   ATTAACTAATAAAAA           CCACTCGGC TTGG GCTGAGTGG            TTTTTTTAATGGATG 100 32
        mneS  667941 ..  667959 + -13.2  -5.53079   TGTCAACAATCTGGA             GCTTCCTG CCA CAGGAAGC             TTTTTTGTGTGTTTT 100 229
GII78_RS03505 NONE
GII78_RS03510  670221 ..  670237 +  -4.3  -3.90744   TCGGGTCATGAGGGG              CGGGCGA GTT TCGCGTG              TTGTTTAGAAAGAGA  59 1
GII78_RS03515  672568 ..  672597 +  -2.1  -4.04353   AACGGCCTTGCCAAA       GAGGGCGGA-GCGA GCT TCATATCTGTCCTC       GTTTTTTTCTGTGTC  53 113
        guaA  674202 ..  674233 + -12.4  -5.24515   ATCAATTAATGGAAA      CCATCTTTTTGGCA ATTT TGCCGGGAAGATGG       TTTTATTTGTTTATT 100 43
        pbuG  675899 ..  675918 + -13.6   -5.7946   ATAAGGAATGAAAAA            CCAGCTGC CGGT GCAGCTGG             TTTTTTTGTTGCAAA 100 37
GII78_RS03530  676910 ..  676927 + -11.3  -5.71712   GCTTTAATGAAAAAA             CCGGCTA ATCC TAGCCGG              TTTTTTTATGTCACA 100 34
        fbpA  677248 ..  677265 +  -5.5  -5.85244   GATATAAAGAGGTGA             GTCTGCT GAAA AGCGGGC              TTTTTTGTTTTGATT  91 46
GII78_RS03540 NONE
GII78_RS03545  678424 ..  678469 +  -4.1  -5.86976   ACGATACATGTACCA TGCCCGGTTTGTATTGC TTCCTCATAAGT GCAATGCAGAGCGGGTA TTTTTTATTTTCTGA  90 257
        purE NONE
        purK NONE
        purB  681430 ..  681450 +  -3.9  -3.28712   TTTAGGTTTAGCATA            GAAGAAGCT TTT AGCGGCTTC            TTCTAAGCCGCCGCA  48 25
GII78_RS03565 NONE
        purS NONE
        purQ NONE
        purL NONE
GII78_RS03585  686795 ..  686814 +  -6.4  -4.40003   GAAAAATGACATAAA            GGCAGC GCAGTTCG GCTGCC             TTTCTCTTTCTGCCC  76 46
GII78_RS03590 NONE
        purN NONE
        purH NONE
        purD  691330 ..  691348 + -11.7  -5.55769   AATAAGTGAGGAAAA             CCCGCAG AATAG CTGCGGG             TTTTTTGTTATCAAA 100 36
GII78_RS03615  693178 ..  693202 + -13.7  -4.39571   TGGGCATAAAAAAAA          GCTTGATCACG TTT TGTGATCAAGC          TTTTCCATTTATCCG 100 7
GII78_RS03625 NONE
GII78_RS03630 NONE
GII78_RS03635  696653 ..  696677 + -13.6  -4.55295   CTTCCAAATAAAAAA         CCGCCC-TGCC GTCT GGCAAGGGCGG          TTTCTTTATGAAACA 100 30
GII78_RS03645 NONE
        pcrA NONE
        ligA NONE
GII78_RS03660  704735 ..  704759 + -18.7  -5.09762   ATGACTGATAGAAAA          CCCTTGTGCCA TAT TGGCACAAGGG          TTTTTATGTTACAAT 100 33
GII78_RS03665  705909 ..  705934 + -14.1  -4.53163   GTGTAGATAGAAAAA         GCCAATGGGAT TCCA GTCCCATTGGC          TTTTATAATGTATCA 100 35
        gatC  708930 ..  708943 +  -2.4  -3.01162   CTGGACTAAAGGAGG               GACA CAAGAA TGTC                ATTATTTGATCATAA  42 32
        gatA NONE
        gatB  711848 ..  711865 +  -8.4  -5.67063   AACGCTAATAAAAAA             GCAGCC CTTAGA GGCTGC              TTTTTTTATGGTCAA 100 33
GII78_RS03700  716021 ..  716051 + -14.8  -2.76696   AGAAGAGTAAAAAAA       CTAAAAGCCTCAGC TCT GCTGGGGCTTTCAG       CTTGTTGAAAAACCC 100 31
GII78_RS03705  717280 ..  717324 + -16.1  -4.12902   AGCCAAGCTCAGAAT GTTGACAAAATCCTAAAAC AGTTTTC GTTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 55
        rlmD  718985 ..  719020 +  -8.2  -4.22214   CTATTCAAATGTTGG    GGCGGCAAATCGGTAA TTAA TCACCCGTGTGCCGCC     TTCTTTTACATCAAT  81 56
GII78_RS03730  726370 ..  726382 +  -4.9  -2.64155   AATTAGTAAAATTGG                GTAAA GAG TTTAC                TGCATTTACAACACC  49 259
GII78_RS03735  727188 ..  727208 + -12.7    -3.737   ATTTAAAACAATAAA            GTGTTAGCA AAT TGCTAACAC            TTTGCTAACGCCTTC  95 103
GII78_RS03740  729029 ..  729045 +  -2.9  -4.59993   GATTCCGGATATGCT              CTTGTCA AAG TGGCTAG              TTTATTTCTAACTTT  65 294
GII78_RS03760  732737 ..  732755 +  -8.9  -5.00616   ATTAAGTGAGACAAA             GACCCTT GCGTA AAGGGTC             TTTTTTGCGGAGAAA 100 32
        rapH NONE
        phrH  734155 ..  734169 +  -7.1  -5.24551   AGTGATCAGAAGAAA               GCCCT TAGCT AGGGC               TTTTTCTTGCTTTAC  90 14
GII78_RS03775  735053 ..  735071 +  -8.8  -5.60993   GTGAGTAAGGAGTGA             GCAGGCTG TTA TGGCCTGC             TTTTTTTGTCCCGGA 100 33
GII78_RS03780  735598 ..  735618 +  -9.8  -5.72118   ATGGTATAAAGAGGA            CACTCTTG CAGAT CAAGAGTG            TTTTTTATCTTTTTT 100 49
GII78_RS03785  736273 ..  736299 +  -6.7  -3.33925   TCAGTGCTTGATTAA        CATGTGGTAAAG GATT CTTTGCC-CATG         TATGTATTTTTCGGA  62 26
GII78_RS03790 NONE
GII78_RS03795  737668 ..  737690 + -13.5   -3.9461   TGAATAGTCTAGAAA           GACCTTCGG CGCTT CCGAAGGTC           TTCTTATTGAAAAAG 100 54
GII78_RS03800 NONE
GII78_RS03805 NONE
       cotJC  738925 ..  738940 +  -4.7   -3.4072   AAAATGGTCTGTTTT              TGCAG TTTGGT CTGCA               TTATAATCAAGGGTG  55 85
GII78_RS03815  739530 ..  739547 +  -3.3  -5.65678   ATTACGGCAGAATAA             GCGTCCT TTGC AGGGGGC              TTTTTTGTCTTTTCT  84 26
GII78_RS03825 NONE
        yesM NONE
        yesN  743412 ..  743444 +  -4.2  -5.58209   GAATTCAGAAGAAAA     CAGGGAGGCGCT-TCC GCA GGATAGC-CATCTCTG     TTTTTTTGACTTTCG  84 2
GII78_RS03840 NONE
GII78_RS03845 NONE
GII78_RS03850 NONE
        yesR NONE
        yesS NONE
GII78_RS03865 NONE
GII78_RS03870 NONE
GII78_RS03875 NONE
GII78_RS03880 NONE
GII78_RS03885  755939 ..  755952 +  -2.3  -2.93708   GAACCAATGCTCAAG               CGCTG TACG CACCG                GTCTTTTTCAAGGGA  42 106
GII78_RS03890 NONE
        yesZ  758664 ..  758687 +  -6.8  -5.36441   AATTTGACAACCCCA          GCTGATTC TTTGCATC GAATCAGC           TTTTTTCTATGGAGG  91 21
GII78_RS03900 NONE
GII78_RS03905 NONE
GII78_RS03910 NONE
GII78_RS03915 NONE
GII78_RS03920  766175 ..  766192 +  -2.7  -3.71649   GCACCATGCAAAGCT             GAGCT TGCCGATT AGCTC              TTTCCGGTTTAGAAA  50 24
GII78_RS03925  766968 ..  766987 +  -8.6   -5.2204   GACTCTTAGAAAAAA            GCTTGCAGC AAG GC-GCAAGC            TTTTTATTGATTGTA 100 39
GII78_RS03945  769450 ..  769485 + -15.6  -4.98531   AATAGAAAGTTTCCA    GGCATATGATTGTCCG TCAC CGGGTGATCATATGCC     TTTTTGATTTGAACA 100 36
GII78_RS03950 NONE
GII78_RS03955  770523 ..  770544 + -12.3  -4.62783   ATGATTAATGAAAAA           GCGCCTGTC ATTG GATAGGCGC            TTTTTGCCATACATC 100 33
GII78_RS03960  770721 ..  770739 + -12.4  -5.32699   GAAAAGACGCTATAG             CCTGTCCG GAT CGGACGGG             TTTTTTAGTCTTTAA 100 26
GII78_RS03970  772529 ..  772550 + -11.7  -5.63517   TATTAAATAGGAAAA           GTCCAGAAA GTGA TTTCTGGAC            TTTTTTGTTTAGAAA 100 35
GII78_RS03975  774232 ..  774255 +  -8.3    -5.093   GGTTATCTAAAGAAA          GAGAGAATA CTGAAA TATTCTCTC           TTTTATTATTTTCAA 100 50
GII78_RS03985  778694 ..  778711 +  -9.9  -5.42265   GATATAGATAAAGAA             GACTGGA GACA TCCAGTC              TTTTTTGTCCTTTCG 100 34
GII78_RS03990  781061 ..  781097 + -19.5  -5.68023   AAATAAGATGAAAAA    GAGCCTTGAGCGGGCGC ATT GCCTTCGCTCAAGGCTC    TTTTTTTGGTTATAC 100 35
GII78_RS03995 NONE
GII78_RS04000 NONE
GII78_RS04005 NONE
GII78_RS04010 NONE
GII78_RS04015  786110 ..  786129 +   -15  -5.07567   GCTGGATTAAAAAAC            CCCCTGCC GCCT GGCAGGGG             TTTTTTCAGCTATGC 100 31
        yfmT NONE
GII78_RS04040  792231 ..  792278 + -15.7  -2.66272   CGAAAAAGCGCTTGA GGAAGAGTAAGAGACCGGGGA CAAACA TCCCCGGTCTTTTTCTTATCC TGCATTTCCATGAAA 100 16
GII78_RS04045  794268 ..  794289 + -10.8  -5.44721   CTGGAAAGCTAAAAA           GCGTGGCC GCAGCA GGCCGCGC            TTTTTTTCACATAAT 100 29
GII78_RS04050  794848 ..  794871 +  -3.1  -5.80727   AACAGGAAAGTGAAA          GACGGGT-GC TGTAT GCTGCTCGTC          TTTTTTATTGTTTTT  88 40
GII78_RS04055  795394 ..  795409 +  -5.4  -4.72007   GAAAAGTTTGTTAAA              CGCTAT TTTT GTAGCG               TTTCTTTTAATGGAA  75 39
GII78_RS04060  796645 ..  796666 + -13.1  -5.17576   GCATTAATAACGAAA           GACACTGCA CAGA TGCAGTGTC            TTTTTTAAGTTGCTA 100 34
GII78_RS04065  797614 ..  797633 +  -7.8  -5.66684   AATGGCAGTAAAAAA            CCCGCC CTTCAGCA GGCGGG             TTTTTTTATAAATTA 100 422
GII78_RS04075  800512 ..  800524 +  -6.2  -5.88565   ACGAAATAAAAAGGA                GGGC GGAAA GCCC                TTTTTTTGTTGTAAA  93 32
GII78_RS04080  801038 ..  801056 + -11.7   -2.5497   CATCGAAACACAAAA             GGAGGGC AAAAA GCCCTCC             CGTTTTCATCTTCAT  80 44
GII78_RS04095  805648 ..  805680 + -13.7  -5.10933   GTGTAGTAATGTTCA      GCTTGTAGAAAAAAC AAT GTTTTTTCTACAAGA      TTTTATTTTAAATGC 100 81
GII78_RS04125  811079 ..  811103 + -10.8  -5.46629   AAAGCAAGGAAAAAA          CCAAAAGGCT ATGAC GGCCTTTTGG          TTTTTTTGCGGTCTT 100 39
GII78_RS04130  812530 ..  812552 +  -9.2  -5.32565   TAAGAAAGTGAAAAA           CACAAAGGGT GCT AACCTTTGTG           TTTTTTAATTAATTA 100 38
GII78_RS04135  814090 ..  814106 + -12.3  -6.09196   TGGTAGAAAGAAAAA              GGCAGAC GCG GTCTGCC              TTTTTTTATTTTCAC 100 35
        yflR NONE
        yflQ NONE
GII78_RS04150  817452 ..  817467 +  -6.1  -5.52384   GACAGGAAATTAAAA              TCCCG ACATCC CGGGA               TTTTTTTCATGCCGA  91 28
        citM  818997 ..  819009 +  -2.7     -2.89   AACATTCCGGAGGTG                TCATT ATG AGTGA                TCCTTATATGCCGCT  42 76
GII78_RS04160  819797 ..  819815 + -11.7  -5.77677   TTATCGTCTATTTGA             CACCCGC ATTAC GCGGGTG             TTTTTTATTGTTTTC 100 26
GII78_RS04165  821154 ..  821165 +  -5.8  -4.56597   AAAATCTCGACACGC                CCGT CATC ACGG                 TTTTTGACCCAGCCG  72 173
GII78_RS04175  822011 ..  822034 + -11.7    -3.695   GTTGAATAGAAAAAA          GCCGCGCAT ATCAAC GTGCGCGGC           TTTGCCATATTTAAG  91 32
GII78_RS04200  825281 ..  825302 + -15.9  -5.42164   CTGTCAAATAAAAAA           GCGGAGAGG GCAA CCTCTCCGC            TTTTTCTTATTTATC 100 30
GII78_RS04210 NONE
GII78_RS04215  827923 ..  827947 +  -7.1   -5.0916   TTTGTCTGATCTGCA          GGATGGCGATT GAT AAAAGCCATCC          TTTTTATGTTCCAAG  90 41
GII78_RS04220  829906 ..  829918 +  -3.3  -3.53012   AATGGTGTATTTTAG                CGGGA CGC TCCGG                TTTGAGAAGAGAAGC  50 484
        treP  835042 ..  835077 +  -4.7  -4.36595   AACATAAATAACAAG    TGGGGAGCGGG-ACGT GTTGA ACGTTCCCTTTTCCCG    TTTTCAATTTAAATA  68 30
        treC NONE
        treR  837536 ..  837557 + -12.3  -5.69793   GGGGAAATGAGAGAG           GCGC-CTGCC TGC GGCAGCGCGC           TTTTTTGTTTGGTAT 100 31
GII78_RS04260  838343 ..  838367 + -14.3  -5.28778   GGGTTTAAAAGAAGA          AAGCTGCTCGC ATA GCGAGCAGCTC          TTTTTTATGCCTGAT 100 33
        yfkM  843529 ..  843548 + -11.4  -5.87996   AGAAATAAGAAAAAA            CGGACGCT CTTG GGCGTCCG             TTTTTTTGTTGCTTA 100 33
GII78_RS04285 NONE
GII78_RS04290 NONE
GII78_RS04295  847088 ..  847112 + -16.5   -4.8622   ACCATTAGCATAAAA          GCCTCCTGACA TGA TGTCGGGAGGC          TTTTTGATTAAGAAG 100 192
         cax NONE
GII78_RS04310  850392 ..  850412 +  -9.8  -6.08342   AAGATAAATAAAAAA            CTGATTCC AACTC GGAATCAG            TTTTTTTGTTTATTG 100 34
GII78_RS04325  852719 ..  852735 +  -6.5  -5.80364   AGATTGGGAATAAAA              CCGCG CGCCCGC CGCGG              TTTTTTTATTGGCAT  93 28
        pdaA  853613 ..  853644 + -16.1  -4.79683   CGTCTTTGTAAAAGA      GAAAAACCTCTCC TTAAAC GGAGAGGTTTTTC       TTTATTTTATACATT 100 30
GII78_RS04345  856612 ..  856632 +  -9.8  -3.01726   GAAAAAACCATTTCA            CTTTCTGC CATCT GCAGAAAG            CTTTATATAGAAACG  76 92
        rlmD  858099 ..  858140 +  -2.2  -4.72272   TAGTTTTCCTAATAA GACCTGGATTTCGGTA AAATAAACAA TTCCGATTTCCGGGTC  TTTTTCGTGCGCAGC  64 65
GII78_RS04355  858988 ..  859011 +  -7.5  -4.01597   TATCTTATGAGTGAA          GACTGC-GAC ACTTA GTCAGCAGTC          TATTTTATTGGTTCT  76 97
GII78_RS04360  860717 ..  860743 +  -5.9  -5.24129   TTCTTGACTAAAATA         AACCTGGATTT TCGGT AAATCCGGGTC         TTTTTTGTACGCAGC  83 93
GII78_RS04365  861495 ..  861513 +  -8.8  -5.82316   TCGATCATTGTCACA             GGCCGGGT GAT ATCCGGTC             TTTTTTTTGCATGCT 100 223
        acoA NONE
        acoB  863697 ..  863711 +  -4.2  -2.52464   TCACGCTTGAATTGC               TTGGCG AGC CGGCAA               TGAATTAAAGGGGGG  47 3
        acoC NONE
        acoL  866338 ..  866364 +  -9.4  -5.95946   ATAATAAAGGAAAAA         GCAGGCGCAT GGATATA AGGCGCCTGC         TTTTTTTATTGTTGA 100 37
        acoR NONE
GII78_RS04395  868501 ..  868523 +   -12  -4.77165   AGGATTAAACAAAAA           TGGCCCGCTT CAT AAGCAGGCCA           TTTTGTTATCCGCGC 100 33
GII78_RS04425  873502 ..  873553 +  -3.9  -2.85668   ATATCATAACTGAAA TTCCCCCATTTTCGAATCTGTAAT TGTAT ATAATAGAAA-GAAAATGGGGGGA TCTGATATGCAGCTC  46 32
GII78_RS04430 NONE
        malP  875941 ..  875960 +   -10  -5.73978   AAATTATTTTATCTT            GCGCTGTT TAAA GACAGCGC             TTTTTTGTTTGTCAT 100 44
GII78_RS04440  878395 ..  878432 + -13.7  -4.48175   ATTAAAATGTACAGA   TTCTAAATAGAGTGCTT AACA ATGCACTCTATTTAGAG    TTTTAATTAGATTTT 100 42
GII78_RS04445 NONE
GII78_RS04450  882322 ..  882344 +  -8.5   -5.4756   CCAATTTGAGAAATA           GACCTTTGT CCTGC ACAGAGGTC           TTTTTTGTTACAGTT 100 25
        catD NONE
        catE  883762 ..  883789 + -14.9  -5.79595   GTGATTTAACTGCAA        TCCCCTTGCCG AAATAA CGGCAGGGGGA         TTTTTTATTTTCCAG 100 32
        lnrJ NONE
        lnrK  885769 ..  885783 +  -7.1  -5.52986   ACGCTTCTCTGAAAA               GGCCT TTTAC AGGCC               TTTTTTTCATGCCCT 100 60
        lnrL NONE
        lnrM NONE
        lnrN  889191 ..  889211 + -11.2  -5.50499   TCCGAGCCTAAAAAA            CATCTGCC GTTTA GGCAGATG            TTTTTTTGCATGTGG 100 30
        estB  890729 ..  890751 +  -3.4  -5.21709   ATCTTCAAAAAACAA           CCTGCTGT CTCCGTT ACAGTGGG           TTTTTTCGTCTGAGA  73 42
GII78_RS04500  891994 ..  892021 + -17.8  -3.69482   ACGCAGGGTGAAAAA        CAAGCGGCAGGG GGGC TCCTGCCGCTTG         TTGTGTATTAAATCA 100 30
        bstA  892752 ..  892764 +  -2.6  -4.27316   CTCGCATGAATGGCG                TCGC TTATC GCGG                TTTTGACTTCAGGAA  58 140
        mprF  897515 ..  897538 + -15.4  -6.01187   GGCAAAAGCAAAAAA          GACTCCGTCT AATA AGACGGAGTC           TTTTTTTATTTCGTT 100 14
GII78_RS04530  899643 ..  899660 +  -4.1  -4.20696   TCGCAAGAAGGGGGG             CGAAGCT ATGA AACTTCG              TTTTGGCGTTACTGC  61 15
GII78_RS04535  900690 ..  900715 + -13.5  -5.55664   TTCTTAATCGTTACA         CCCATTTTCTT AAAA AAGAAAATGGG          TTTTTTTGATAATGA 100 34
GII78_RS04540  901713 ..  901732 +  -6.6  -3.13906   AAGATGCACTTTCCG            TTATCATT ATGA AATGATAA             TCATTTTCAATTGCA  61 61
GII78_RS04545  902354 ..  902380 + -16.7   -4.8622   CTGAAATGTAAAAAA         CCCCTTGTCTC AAACG GAGACAAGGGG         TTTTTCATTAACGAG 100 30
        recX NONE
GII78_RS04570  904932 ..  904950 + -13.2  -5.27335   ATAAAGCGTAACGGG             GAGGCTGA TGA TCAGCCTC             TTTTTGTTTGCAGCA 100 30
GII78_RS04575  906261 ..  906281 + -11.2   -4.1023   AATAAAGGGTAAAAA            CAGCTGCA GTGTA TGCAGCTG            TTCTTCTTTACCGTT  89 29
GII78_RS04585  906839 ..  906860 + -10.1  -5.52347   CTTTTGCATTAAAAA           CCTGCCGTT AACG ACCGGCAGG            TTTTTTCATTTTCTT 100 29
GII78_RS04590  907502 ..  907519 +  -5.5  -4.71061   CAAATGCGATAAAAA             GGCAGGC CGAG GCTTGTC              TTTTTGCCTATGCAT  73 29
        spdL NONE
GII78_RS04600  908783 ..  908801 +  -9.6  -5.01546   AATTTCTCTCCATCC             GTCTGTCA TAA TGGCAGAC             TTTTTCTGTGCGTTT 100 46
GII78_RS04605  909994 ..  910005 +  -2.2  -3.51573   ACTGAAAATACCAAG                C-GCC ATT GGCAG                TGCTTTTTTTGCGTG  47 36
GII78_RS04610  912620 ..  912653 +  -8.1  -5.28826   TTCTATATAAGACGT     AAAAAGCCCGGCTCT ATAT AGAGCCGAGCTTTAA      TTTTTTCTGAAGTTT 100 5
        mutY  915004 ..  915014 +  -2.4  -3.38162   TCATTGCGCTTCATT                 CCGC CGC GCGC                 TTCAATTTCTTGCGT  45 88
        fabL NONE
GII78_RS04635  916349 ..  916373 +  -5.8  -5.56264   CTGAAACAGAAAAAA         GCACTT-CATC TTCG GGTGGAAGTGC          TTTTTTCTGTTTGAA  91 44
GII78_RS04640  916773 ..  916798 +    -9  -5.24291   GTGTAGTGCAGGAAT         GTGCCATTCC CCGGCC GGAATGGCTC          TTTTATTTTCATTTT 100 35
GII78_RS04645  917452 ..  917472 +  -6.9  -4.62336   ATGGTTACGTAAAAA            CCTGTTG CGGGGTA CAACAGG            TTTTTCACATGGGCT  81 40
GII78_RS04650  919275 ..  919304 + -11.7  -5.76633   GAACTAAAACATCAA       TCTTATATCCTTT TAAC GAAGGATATAAGA        TTTTTTTGTATATAA 100 34
GII78_RS04665  922547 ..  922560 +  -3.1  -3.09286   AAAAGTAAATCTCTA               TGAGC CTAT GCTTA                CTTTTACCCTGATAT  45 33
        perR  923098 ..  923136 + -13.4   -3.6834   AAAAAGAAAATCATT   AAAAATAAGCTGACCG CACGAAA CGGTCAGCTTATTTTA   TTTCGACATTTTCTT 100 24
GII78_RS04680  924660 ..  924679 +  -2.2  -2.65751   TAAATCAAAAAAACA            TTTGAC AAAAGAAA GTCAAA             ATGTTATATTGATAA  40 106
GII78_RS04685  926488 ..  926513 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII78_RS04690  929547 ..  929603 +    -2  -2.70232   ATGTCACACCTGTTA TCTAGTTTTGAGAGAAT-AAGTTTTTT CAAA AAAACACTTGATTTTCTCAAGAATACA TAGTATAATGTTAAA  40 48
         rrf NONE
GII78_RS04700 NONE
GII78_RS04705  929904 ..  929916 +  -3.3  -3.25942   TCAACTCCGTCTCAA                GGGTT CGA ATCCC                TTGCTCTCCGCCACT  47 0
GII78_RS04710 NONE
GII78_RS04715 NONE
GII78_RS04720 NONE
GII78_RS04725 NONE
GII78_RS04730 NONE
GII78_RS04735  930464 ..  930474 +  -2.6  -3.83026   CTCTTGCCGGCACTG                 TTTT TTC AAAA                 TTTAATGTGGAGGGG  52 27
GII78_RS04740 NONE
GII78_RS04745 NONE
GII78_RS04750 NONE
GII78_RS04755  930847 ..  930859 +  -2.7  -3.09933   ACTTTTTATATCAAC                TGCAT ATA ATGTA                TTAAGTCCATTAAAA  43 42
GII78_RS04760 NONE
GII78_RS04765 NONE
GII78_RS04770  931119 ..  931153 + -13.8  -4.52142   AAGTCCGGCCCTCGG     CACCAATTTTACTTAC ATG GTAAGTTGAATTGGTG     TTTGTGTTTTATCAT 100 21
GII78_RS04775  931481 ..  931502 + -10.9  -5.44198   CGGTATACTGAAAAA           CCCGTTTCT TAAC AGGAACGGG            TTTTTATTATTTATT 100 36
GII78_RS04785  932675 ..  932706 +   -16  -5.00846   TGGAGCAATAAAAAA      GAGACGGCATCTCA TCTT TGAGATCCCGTCTC       TTTTTGTGGTCTTTA 100 30
GII78_RS04795  933974 ..  933997 + -11.8  -5.33785   TCTTTCTGACTGTAA          CCGGGTTCAT TTAT ATGAATCCGG           TTTTTTGTGCTGGTT 100 248
        thiC  935838 ..  935867 + -18.1  -4.56597   TATATCAATAAAAAA       GATGAAGATGGAG AATG CTCCATCTTCATC        TTTTTAGAAAAACAG 100 30
        senS  937667 ..  937684 + -12.7  -4.84529   CTAAATAGAAAAAAA             CCCGCTG ATTA CAGCGGG              TTTTTGCATTTCTAC 100 33
GII78_RS04820 NONE
GII78_RS04825 NONE
GII78_RS04830 NONE
        ssuD NONE
GII78_RS04840  943966 ..  943982 +  -7.9  -3.63744   TGCATCATTAGAATG              GGCGGCT TCA GGCCGTC              TGTTTTACAAAGCGG  69 30
        rpsN  944350 ..  944375 +  -9.7  -5.85011   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 33
GII78_RS04860  945318 ..  945354 + -10.3  -5.71712   TACATACGTTATTAA    CGCAGTGTTTCGTTTCT CAG ATAAACGAAGTATTGCG    TTTTTTTATGTGAAA 100 40
        queG  947286 ..  947305 +  -5.8   -5.4251   AGCAGAAGGAAAAAA            CACTTGAGA TCA TC-CAAGTG            TTTTTTCTCTATAAA  89 52
GII78_RS04875 NONE
        trmL  948789 ..  948811 + -15.6  -5.42862   TAAAATAGTGAAAAA           CCCGCTCATC GAT GATGGGCGGG           TTTTTTTGCGGATGT 100 33
GII78_RS04885 NONE
GII78_RS04890 NONE
GII78_RS04895  950994 ..  951015 + -12.3  -5.77677   TCTGTTATACAAAAA           GGGTGCTCT TTCA GGAGCACCC            TTTTTTATTCTTTTC 100 49
        prkA  953222 ..  953246 +   -10  -4.46581   AACCGATAAGCAACG          TGACCCGTCC GAATA GGGCGGGTTA          TTTTGTCCCATTTTC  91 32
        yhbH  954580 ..  954593 +  -5.2  -6.25578   TTTTCGTAATGAAAA               GCCC ATTTCA GGGC                TTTTTTTTATTTAAT 100 32
GII78_RS04910 NONE
GII78_RS04915 NONE
GII78_RS04920 NONE
GII78_RS04925 NONE
GII78_RS04930 NONE
GII78_RS04935 NONE
GII78_RS04940 NONE
GII78_RS04945 NONE
GII78_RS04950 NONE
GII78_RS04955 NONE
GII78_RS04960  962343 ..  962366 +   -14    -5.252   AAACTAATAAAGAAA          GCTGTTTTGC TTAT GCAAAACAGC           TTTTTTGTCAAAATA 100 34
GII78_RS04970  963877 ..  963903 + -11.8  -5.93809   TCTTTCAGATTGGAA         GAATGAATTCGA ACA TTGAATTCATTC         TTTTTTTTCTGAAAA 100 7
GII78_RS04980  966551 ..  966575 +   -13  -5.40072   CGTAATATATGAAAA          CGTGTAATCC CAACA GGATTACACG          TTTTTTTAACGGCCG 100 36
GII78_RS04990  967756 ..  967774 + -14.6  -5.33026   GAATAAATAAAAAAA             GCCGCACA ATT TGTGCGGC             TTTTTCTTTGCGTTA 100 35
GII78_RS04995  969016 ..  969035 +  -2.2  -3.90318   CAGCATAGAAGCTTG            TGCTTT AATCGCGC AAAGCA             TTTGTCGGCTGATGA  53 206
        yhcR NONE
GII78_RS05010  973753 ..  973772 +   -10  -4.71426   CGAGTGACTTAAAAA            GCCG-AGGC AGT GCCTGCGGC            TTTTCTTCATGAAAA  91 29
GII78_RS05020  975205 ..  975230 + -11.3  -4.96848   ATAATCATGCGGCAA         GGGCTTTTCTA TTTT TAGAAAAGCTC          TTTTTGTATCAGAGA 100 37
GII78_RS05025  975760 ..  975780 + -11.9   -4.1822   TTCATTAATAAGAAA            GAGCTTGCA GTG TGCAGGCTC            TTTCTTCACATAAAA  93 33
GII78_RS05030 NONE
GII78_RS05035  978111 ..  978128 +  -9.8  -5.00616   ATAATTCCCAAAAAA             CCCGCC AATTCA GGCGGG              TTTTTTAAAACAAAA 100 37
GII78_RS05040 NONE
        glpP  980574 ..  980584 +  -4.6  -4.46576   CAAATGTTTATGCAC                 CCGT AAA GCGG                 TTTGTTGTGGTTTTT  66 123
        glpF NONE
        glpK  983044 ..  983096 + -20.2  -5.19879   GTCCTGAGATGAGGA GAGACCACAGCA-CCAAAGTGTAAG TAAG CATGCACTTTGGCTGTTGTGGTCTC TTTTTCTATTTACCG 100 81
GII78_RS05060  984805 ..  984828 + -15.4  -4.89063   TTGAGCAATAAATCA          TAACGGGCTG TCTG CAGCCCGTTA           TTTCTTTTTACGTGC 100 30
        pgcA  986689 ..  986713 + -11.5  -5.69262   ATAATTCAAGTATGA          GCTGGGTCATT GTA AATGATCCGGC          TTTTTCTTTTTCTCA 100 37
        yhcY NONE
        yhcZ NONE
GII78_RS05080  989118 ..  989139 + -15.9  -4.62441   CGCAAAAGCAGGAAA           TCCCGGCGT CTAA ACGCCGGGA            TTTGTTTATGTGAGA 100 13
GII78_RS05090  989919 ..  989943 +  -5.6  -4.55887   GGCTCTAATAAAAAA          CTGTACAGCC GTTAA GGCCGCACAG          TTTCTGTTTTTAGAA  73 33
       spoVR  995222 ..  995241 + -12.2  -5.46706   TATTTATAAAAAAGA            GGATGCAG CGTT CTGCATCC             TTTTTATTTTCCAGT 100 32
        lytE  998175 ..  998192 + -11.3  -5.63103   GATTTTTAGAGAAAA             CCCGTTC ATTG GAACGGG              TTTTTTTCATTAGAC 100 39
GII78_RS05130 NONE
GII78_RS05135 1001272 .. 1001287 +    -9   -5.9873   GTAATCAACGAAAAA              CCAGCT TCAG AGCTGG               TTTTTTTTGTGATGA 100 37
        bcaP 1002919 .. 1002943 + -17.2  -4.79752   TAACCTTTTGATAAA          GAGAGCGGCC ATACA GGCCGCTCTC          TTTTCTGTTCTTGGC 100 38
GII78_RS05145 1004385 .. 1004406 + -13.7  -5.68438   TATCATTTTAAAAAA           CAGGCTCCG TTTC CGGGGCCTG            TTTTTTATTTAATAA 100 30
GII78_RS05155 1006372 .. 1006389 + -11.3  -5.00616   GTGTAATGAAAAAAA             GACGCCT GAAA AGGCGTC              TTTTTTAAAAGCCAA 100 35
GII78_RS05175 1009427 .. 1009446 +   -10   -4.7416   GGAAATATAACAAAA            GCTGAGGG CGAA TCCTCAGC             TTTTTGGCGTTTTAA 100 31
GII78_RS05180 1010190 .. 1010223 + -14.9  -3.38272   CTGAAACTGTGAAAA     TAAGAAAAGCACCTT ATAC AAGGTGCTTTTTTTA      TTATGCCTCCTGCTG 100 60
GII78_RS05195 1013403 .. 1013427 +  -8.7  -4.96848   AGAAGGCAAAGAAAA          GAAAACAGTTT TCA AGGCTGTTTTC          TTTTTATATCCGCAA 100 40
GII78_RS05200 1015084 .. 1015108 +  -7.2  -5.84432   TGCTGAACAGTGCAA          CCTTGAGC GAGAAATAA GCTCAAGG          TTTTTTTATATTGTG 100 9
GII78_RS05220 1016964 .. 1016982 + -17.4   -4.4767   TGAATTGAGAAATGA             CCCCGGCG TTT CGCCGGGG             TTTTGTGCTGCATAA 100 68
        mscY 1018192 .. 1018216 +  -8.6  -4.77036   CGGGCTTAAAAGAGA          GACTTCGTCT GACAG AGGCGGAGTC          TTTTTCATGGTAAAA 100 32
        srtN 1018995 .. 1019017 +  -9.1   -5.5112   TTTGGGCATGAAAAA           GTGAGCCGC TTTAT GCGCCTCAC           TTTTTTATTCATGAA 100 22
         dat 1021018 .. 1021042 +  -7.9  -5.75538   AATGAACGAAGAAAA         GAG-CCCGCT TTTTAC AGCGGGGCTC          TTTTTATTTTTTAAC 100 40
GII78_RS05255 NONE
        bmrC NONE
        bmrD 1027265 .. 1027286 + -11.7  -5.07011   CATAACGCTCAAAAA           CCCAAAACA ATCG TGTTTTGGG            TTTTTGGTTTATGTA 100 36
GII78_RS05300 1032897 .. 1032911 +    -5  -3.51785   GCAATGATGAAAGGA               GCTATT TAC AATGGC               TGTTAATTTTTATGA  57 108
GII78_RS05305 1033270 .. 1033291 + -11.7   -5.5604   GGCTAATAAGCAAAA           TCCCTTCTT GGAT AAGAAGGGA            TTTTTTATTCATTCA 100 35
GII78_RS05315 1035733 .. 1035761 + -11.7  -5.03145   AACGTGTGTAAAAAA       GCCGCTCGCGCC CTGACA GGTGCG-GCGGC        TTTTTTGCCGGATTG 100 30
GII78_RS05320 1037336 .. 1037357 + -14.5  -5.65177   TGAAAAAACGACAAA           GCAGCACTG ATTA CAGTGCTGC            TTTTTTTATCCCTGT 100 16
GII78_RS05340 1040426 .. 1040468 + -12.3  -2.54896   AAGCGTAACAGATCA GCCGGAAAGCTGATCATCTGT GAA ACAAA--ATCAGCTTTCCGGC TGCATTGACTAAACG  82 33
GII78_RS05350 NONE
GII78_RS05355 1042908 .. 1042929 + -12.3  -4.67607   AAACTGATTGGAAAA           CAGCCTGGG GATT CTCAGGCTG            TTTCTTTATTGACAG 100 34
GII78_RS05360 1044234 .. 1044244 +  -2.4  -3.63305   TGCTTGATACATGAG                 GCGG TGA CAGC                 TTTGCGAATTATATC  47 27
        sbcE 1047104 .. 1047120 +  -5.2  -2.78463   TGCATTTCATAGCAG              CCAAAT CATCC ATTTGG              TGTCATAAAAGAGGT  50 1
        yhaM 1048155 .. 1048184 + -11.6  -4.76644   TAAATAACTTAAAAA       GGACTGATGCTGA CATAT TCAGC-TCAGTCC       TTTTTGATGCGTCTT 100 34
        yhaL 1048489 .. 1048515 + -22.4  -6.01369   CATCGCATAAAAAAA         GCTGTGCGGCTC AAT GAGCCGCACAGC         TTTTTTTATTATTTA 100 31
       yhzE1 1049658 .. 1049682 + -10.8  -4.68908   TACTAAGCAGCCCGA          GGATCGCTTG CAACA TAAGCGATCC          TTTATTTTCACTAGC  95 35
       yhzE2 1049873 .. 1049899 + -15.3  -4.59293   AATCAACATAAAAAA         GCATAGCTGCT TAATC AGCAGCTATGC         TTTCTTTCGTATTTA 100 39
GII78_RS05405 1051406 .. 1051421 +  -6.8  -2.79302   TTTCCATAAAATCAT              CGCCGT AGAT ATGGCG               TATCATACACATCAT  55 162
GII78_RS05420 1052771 .. 1052792 + -10.1  -4.53705   CTCTGTTCAAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTGACAATT  91 64
        ecsA NONE
        ecsB NONE
GII78_RS05450 1058278 .. 1058303 + -11.9  -5.64274   GGATATTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTTATAGCTGA 100 12
GII78_RS05475 NONE
        hemE NONE
        hemH NONE
        hemY 1067774 .. 1067793 + -11.4  -5.58454   TTTATTCAGCTAAAA            CCTCCGCT TTAT GGCGGAGG             TTTTTTTGATGTGCA 100 28
GII78_RS05495 1068476 .. 1068500 +  -4.4  -4.32857   TTGTATGTTGTCAAA         GGATTGTC-AG CGAA CTAGATAATCC          TTTCTCTTTGCAAGA  63 8
GII78_RS05500 1070899 .. 1070924 + -13.5  -5.83226   CTTCATAAAGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTGTTACATT 100 33
GII78_RS05510 1072943 .. 1072958 +  -6.2  -5.34365   GTGTTTTTTACAAGA              GAAACA ATGG TGTTTC               TTTTTCTTCTTCTCG  91 155
GII78_RS05520 NONE
GII78_RS05525 1074691 .. 1074716 + -17.6   -4.4078   TTAAAGATTAAAAAA         GCCTGCGGGG CAAGAA CCCCGCAGGC          TTTTCATTAACCAGA 100 30
GII78_RS05540 1077311 .. 1077321 +  -2.4  -2.77135   TGTGGGAAGGATAAA                 GGAG GAG CACC                 ATGTTATTTATAGAC  41 27
GII78_RS05545 NONE
GII78_RS05550 1079036 .. 1079061 +  -6.2  -5.90231   CTATGACAGTACTGA         CACTC-AGGGC TTTTT GCTCTTGAGTG         TTTTTTTCTGTTTCT  93 35
        lcfB 1080688 .. 1080720 +   -18  -4.26079   TTTGCCCCAATAAAA      TGAAAAAGCGAAGC GGTTA GCTTCGCTTTTTCA      TTTTCAATCCTTTGC 100 28
GII78_RS05565 1082552 .. 1082577 +  -9.1  -4.93316   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTACTATTATTG 100 29
GII78_RS05575 NONE
GII78_RS05580 1085689 .. 1085718 + -11.6  -5.24129   GCTTTAACAGGATCA       GCTTGCAGAGAA TGTTAT TTTTCTGCAAGC        TTTTTTGTGGACAGG 100 34
GII78_RS05585 1086871 .. 1086900 + -18.1  -4.00042   TGCTAAGAAATAAAA       GAAAAAGACAGGC AAAC GCCTGTCTTTTTC        TTATTTGATAAAGCC 100 28
GII78_RS05620 1094727 .. 1094747 + -14.1  -3.71888   AACGGATAATAAAAA            GCCAATCCT TGA AGGATTGGC            TTATTCGCTCTGCTT 100 32
        comK 1095864 .. 1095888 + -11.4  -3.74251   TTAGAAAAATAGGAA          GGAGCTGACC GAACA GGGCAGCTCC          TTTCATAAAGCTATG  91 37
GII78_RS05640 1097286 .. 1097323 + -15.3  -2.71144   CCTGTGAACGGTAAA   TAAGAAAAAGCAATCTGG TGT CCAGATTGCTTTTT-TTA   TGCTTAGGCCGCCTG 100 27
GII78_RS05660 NONE
GII78_RS05665 1100932 .. 1100949 +  -7.1  -2.51393   GAGCTATAATCAAAA             TTGTTAC CTGT GTAACAA              AATTTATATATTTTT  60 111
GII78_RS05670 1102529 .. 1102539 +    -4  -3.88498   CAGCCGAGTATAATT                 CAAT TCG ATTG                 TTTCATCTGTAACAA  56 28
GII78_RS05675 1103135 .. 1103152 + -11.3  -4.88295   TTTTTAAATAAAAAA             CACGCAC TGCG GTGCGTG              TTTTTCGCTTTGTTT 100 30
        ntdR 1108914 .. 1108934 +  -5.5  -4.68593   TTTATATAAGAAAAA            GAGGTTA TTCATTT TAACCTC            TTTTTCAATCGTAAG  73 70
GII78_RS05715 1113394 .. 1113415 + -10.2   -5.0538   CTGTCCAAATAAAAA           GAGGGTTC TTTTTT GAACCCTC            TTTTTTAAACTGCCA 100 29
        addB NONE
        addA NONE
        sbcD NONE
        sbcC NONE
        hlpB 1126630 .. 1126656 +  -8.8  -4.51196   AAAAATGACTAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCGTTTCCA  90 33
GII78_RS05795 1131325 .. 1131346 +  -4.3  -5.32882   GCTGAATAAAACTGG           AGGGCGG ACCCGGAC CCGCCCG            TTTTTTCTGATAATC  81 36
GII78_RS05800 1131803 .. 1131825 +  -7.7  -5.90231   AGAAAAACCTATGAA           CCCGGCTCT TTGAT AGAGTTGGG           TTTTTTTATATTTAT 100 42
        wprA 1134646 .. 1134664 + -11.7  -5.63517   AAAAGTAACCAAAAA             GCGGTGC TCGAT GCACCGC             TTTTTTATTTGCGCC 100 33
        asnB 1137292 .. 1137328 +  -6.1  -5.24129   AGATTTAAATAAGAA   GGATAGAT-GAGCA GGGAAATATA TGCTCTATCTATCC    TTTTTTGTACAACAG  83 77
        farP 1138912 .. 1138932 +  -6.8  -3.03243   GATATCTAAAAAACA            CCCGGC CTTGATTGA GCCGGG            TGTTACGCCATACCT  60 32
GII78_RS05835 NONE
        degA 1142322 .. 1142337 + -10.4  -5.32944   CGCTCAACACATGAG              CCCGCT AATG AGCGGG               TTTTTTCATTATGAC 100 27
        iolX 1143595 .. 1143617 +  -4.8  -4.52142   CTTTCCGCAAAAAAA           GCAAGGAC ATTTTTA GCCCTTGC           TTTCTCTTTTCTCAT  68 64
GII78_RS05860 1146738 .. 1146751 +  -5.9  -3.76402   TGTGAATGACAGCCC               CGCTG AAAT CGGCG                TTTGATAAATCACAT  61 413
GII78_RS05870 1148016 .. 1148031 +  -6.1  -5.42131   ACTCATAAGAAAAAA              CCCGA CATTGA TCGGG               TTTTTTATATAATTC  89 33
GII78_RS05890 1151485 .. 1151495 +    -4  -2.55361   CAACGATAGAGAGGG                 TCAT AAT ATGA                 ATGATTTTTCACTAG  45 15
GII78_RS05895 1152261 .. 1152291 +  -8.3  -2.96205   TGTAAAATAGCGGCT      GCGG-GGCTCTCGT CGTG AAGAGAGCCTCTGC       CTATTATTTTTTATG  67 36
GII78_RS05935 1160565 .. 1160597 + -17.8  -5.76633   AAAATAGCATGAAAA     CGGCTCGC-CTGCAG CAGA CTGCGGAGCGAGCCG      TTTTTTTATGTCTAG 100 34
GII78_RS05955 NONE
GII78_RS05960 NONE
GII78_RS05965 1164068 .. 1164097 + -13.7   -5.0133   AGTAGAGTAGAAAAA       GAAGGGCAGAG CGAAATAT CTCTGCCCTTC        TTTTTTGGGAAAATA 100 31
        nprB 1165812 .. 1165863 + -24.3  -4.63218   GCTGTCGGCATTCTA TGAGCAAACAAAAACAGTCAGGAC ACAGA GTC-TGACTGTTTTTGTTTGCTCA TTTTCTTAAAAAGAA 100 23
GII78_RS05980 1167705 .. 1167723 +  -5.2  -3.45023   TGACGAAAGCAGGTG             GAAGTCGT GAA ACGGCTGC             TTGTGATGCTCCTCC  55 38
GII78_RS05985 1168169 .. 1168191 + -17.8  -5.80364   TGAAGTCAAATAAGA           GGCTATGGCG AGT CGCCATAGCC           TTTTTTTATTGCAGT 100 28
GII78_RS06000 1170342 .. 1170356 +  -2.8   -2.6563   TGAATGGTTTGAAAC               GTACTT ATA AAGCAC               TAAGTTATTAACAAG  41 16
GII78_RS06005 1170733 .. 1170758 + -11.9  -5.03314   CAATAAAACAAAAAA         GGACAGCCTGA CATG TGAGGCTGTCC          TTTTTTACAGCTGAA 100 35
GII78_RS06010 NONE
GII78_RS06015 NONE
GII78_RS06020 1172981 .. 1173001 + -15.5  -5.61596   TGATGATGATGAAAA            CAGGCTGAC GCG GTCAGCCTG            TTTTTTTATGCGGCT 100 18
GII78_RS06025 NONE
        argJ NONE
        argB 1176252 .. 1176268 +  -5.1  -3.91716   GTCAAAGCAAAGGAG              GCTGTTT CAT GAGCAGC              TTGTTTCAAACCTAC  61 14
GII78_RS06040 1177402 .. 1177416 +  -3.5  -4.08666   AATCGCTCATCATTC               CGCTG TAAAC CAGTG               ATTTTTTTTCGATAT  57 10
GII78_RS06045 NONE
GII78_RS06050 NONE
        argF 1182575 .. 1182595 + -11.2  -5.52384   GGAATCATCAAAAAA            CTGCTGAG CCAAA CTCAGCAG            TTTTTTTGATGGCAA 100 19
GII78_RS06060 1182858 .. 1182880 + -10.7  -4.92239   GTGACCACTAAAAAA           CCCAAAACA ATAAA TGTTTTGGG           TTTTTGGCTTTTTAA 100 37
GII78_RS06070 1184076 .. 1184099 +  -8.8  -5.07652   AGAATATAATGACAA          CAGCCTTCTC TTTT GCGGAGGCTG           TTTTGTTTTGGGAAA 100 41
GII78_RS06075 1184787 .. 1184802 +  -3.2  -3.48981   AAAGGAGTTGAACAT              GACTTG ATCA CAAGGC               TTGTCATGATCTTTT  50 113
         med NONE
GII78_RS06085 1185956 .. 1185975 + -10.8  -4.18697   ACAGAATAAGAAGAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  90 32
        fabH NONE
        fabF 1188596 .. 1188620 + -17.9  -6.02914   CATAATCAAGCCAAA          CCGGCTGCCCT TAA AGGGTAGCCGG          TTTTTTTTGTGTGCA 100 36
GII78_RS06105 NONE
        appD NONE
        appF 1191587 .. 1191598 +  -2.2  -2.96164   GCTCCCAGCCACTTT                GTGG CTTG TCAC                 CTTTATAGCTAATGT  42 2
GII78_RS06120 1193345 .. 1193366 + -10.9  -4.11027   ATTTCCCTTAAAGGG           GAGGGAGAG CGTT TTCTCCCTC            TTCTGTTTTTAATAA  89 41
        appB NONE
        appC 1195450 .. 1195462 +  -3.4  -4.84359   TATCCCTTGCCTATA                CTGT GGACA ACAG                TTTTTATAAAAGTGA  67 192
GII78_RS06135 1196247 .. 1196266 + -12.2  -5.27477   GTCAACTAAAAAAAA            CCGCTCTT TGCA AAGAGCGG             TTTTTTGATTAGCGT 100 32
        oppA 1199677 .. 1199705 + -13.3   -4.2704   AATAAAAGACCTCAA        GGTATATGGGG AGAAAAG CCCCATATACC        TTTCTTACTGATGGA 100 54
        oppB NONE
        oppC NONE
        oppD NONE
        oppF 1203621 .. 1203646 + -14.9  -5.52909   TTCATGATTCATCAA         TCCTTCAAGAG ATTT CTCTTGAAGGA          TTTTTTTGCGTCTTC 100 34
GII78_RS06170 1204955 .. 1204971 +  -9.4  -4.25104   ACACTTCAAAATGAA              CGGAGC AGCTG GCTCCG              TTTTGCTGAAAAAAA  86 44
GII78_RS06175 NONE
         spx 1206268 .. 1206299 + -13.2  -4.60487   AATAGATCGTATCAT      CAAAAGAAGGCTGA GTGA TCAGCCTTCTTTTA       TTTTTCAACCTGCTG 100 39
GII78_RS06190 NONE
        mecA 1207891 .. 1207912 + -13.1  -5.93809   TTGCATCATAGCAAA           CCGATTTCC TTCC GGAAATCGG            TTTTTTTTATGAACG 100 30
        coiA NONE
        pepF 1211266 .. 1211290 + -12.9  -5.01732   GTCTTAAAAAAGTAA          GCCTGTGCG GAAATGA CGCACAGGC          TTTTTTAAAACCCTT 100 34
GII78_RS06240 NONE
        yjbM NONE
GII78_RS06250 NONE
GII78_RS06255 1217523 .. 1217545 +   -15  -5.36441   AGAAAACTGATAAAA           GGAGAGAATC ATT GATTCTCTCC           TTTTTTATATGGGGC 100 11
GII78_RS06265 1220559 .. 1220582 + -11.8  -6.09196   TATGCCAATTCCAAA          CCACTTTTCC TTGC GGGAAAGTGG           TTTTTTTATTTTCAG 100 221
        tenA NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG 1223953 .. 1223967 +  -6.4  -2.87132   AACGGCAAGCAGTCC               GGGAGA AGG TCTTCC               TGTATGACAGGCAGG  58 4
GII78_RS06295 NONE
        thiD 1225814 .. 1225838 +   -13  -4.37711   TAAATACAAGCCGAT          GAGATCACCA GCTGA TGGTGATCTC          TTTTGCGTTTGCTAC 100 24
        fabI 1226744 .. 1226764 + -11.2  -5.82036   CAGGATCTATATCAA            GCAATCCC GAATA GGGATTGC            TTTTTTATTTCTTCT 100 42
        cotO 1227526 .. 1227552 + -10.8  -5.08824   ACGAAAAAGAAAAAA         GCTGCCCGGC TGATGTT GCCGGACAGC         TTTTTTACATAGAGA 100 40
        yjcA 1230893 .. 1230921 +  -9.8  -5.40072   GCCTCAATAGCCTGG       CAAAGAAACCGGA GAAC TCCGGTTT-TTTG        TTTTTTTAACGGGGC 100 225
GII78_RS06345 NONE
        yjcZ 1231420 .. 1231447 + -16.4  -3.31937   TTTAAGATGTATTGA        GGAAGTACGGGT TATA ACCCGTGCTTCC         TTGCCTTGTGTTTAT 100 36
      spoVIF 1231847 .. 1231866 +   -15  -2.50016   TTTTTACAGTAAAAA            CCCGGCAG TAAT CTGCCGGG             CTGTTAATGATGCAA  95 76
GII78_RS06365 1234525 .. 1234544 +    -5  -5.71712   GATATGTATAAAAAA            CCGTTC ATACGAGA GAACGG             TTTTTTTATATGCAG  88 30
        metI NONE
        metC 1238933 .. 1238970 + -15.2  -3.75024   CCAGTTGCGGTTCGT   TAA-AAAAGAAGCCGGG GATGG CCCGGCTTCTTTTATTA   TTGTTCGTCATCAGG 100 23
GII78_RS06405 1241028 .. 1241044 + -12.3  -5.38497   GAATCATAGCTTAAA              CCCTTGC GTA GCAAGGG              TTTTTTACTTTGCCT 100 33
GII78_RS06470 1248862 .. 1248894 + -14.4  -3.64541   CGAAAATGTTTTTTT      GAGCTGATTTTGAA ATGTA TTCAAAGTCAGCTC      TGTTTGATTTAATGG 100 147
GII78_RS06475 1249808 .. 1249850 + -16.7  -3.24709   GAAGCGCAATTGAAA TAAAATAAGGTCCCTTCTCT TTTT AGAGG-GGGACCTTATTTTA TTCATGCATGTTTTG 100 100
        manR 1252750 .. 1252767 +  -7.7  -6.17268   ATTTGGATTATTAAA             GCAGGGA TTAT TCCTTGC              TTTTTTTTGTTATAG 100 27
        manP NONE
        manA NONE
GII78_RS06500 1256457 .. 1256483 +   -16  -2.72049   GGTAAATAATCCAAA         CAAAAGCAGGCG CAG TGCCTGCTTTTG         TAATTAAGGACTCTA 100 32
        ybaK 1258351 .. 1258371 +  -6.2  -4.60041   GGGGGAAACAAAAAA            GCTTAGTC ATATC GATTAAGC            TTTTTCCGCATCCCT  76 52
        pdaC 1262638 .. 1262657 + -13.6   -5.5762   AAATAAATTAGAAAA            GGCTGTCC GTAC GGACAGCC             TTTTTTCTATTTAAT 100 35
GII78_RS06555 1264465 .. 1264483 +  -3.7   -4.8622   TTCTACATGAAAAAA             GCGTCAC ATACA GCGGCGC             TTTTTGATTCCCAAA  69 31
GII78_RS06570 NONE
GII78_RS06575 1269206 .. 1269230 + -13.6  -5.14563   GAGATTGACCTCCCA         CCCGAGC-GGC TTCA GCCAGCTCGGG          TTTTTTGATGAAAAG 100 33
GII78_RS06580 1270052 .. 1270081 + -14.5  -5.24129   ATGCTAATTTACAGT       TGCACGTTTTTCA TCTG TGGAAAACGTGCA        TTTTTTATAGCGAAA 100 41
GII78_RS06585 1270746 .. 1270767 + -13.1  -5.07567   TATTTGACTAAAAAA           GAAAGAGCC TATG GGCTCTTTC            TTTTTTAAAATGTAA 100 30
        yjiB NONE
GII78_RS06600 1273842 .. 1273862 + -12.7  -4.80455   GTAAAAACATAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATA 100 37
GII78_RS06610 1275058 .. 1275081 + -13.2  -4.64591   TAACAAGTACAAAAA          GCCGCTTTTC CCTC GGAAAGCGGC           TTTTGTCTGTCATTC 100 38
GII78_RS06630 1278503 .. 1278515 +    -2  -4.52502   AGAGAGTAAAGGATT                TTGA CTTAT TCAA                TTGTTTATTTTTAGA  58 210
GII78_RS06635 NONE
GII78_RS06640 1280364 .. 1280408 + -13.9  -5.90231   CCTTTTAATGAATCT GACATTGCCA-AAAGCGTTC CTTACC GAGTGCTTTCTGGCAATGTC TTTTTTTATGTTTAT 100 42
        uxaC 1281962 .. 1282009 +  -3.4  -2.76696   AAGAGAAAGCAAACG TGTAACAAAGTG-TCCGCTCAGC ATC GCTGAGCGGATCACTATCCGAAA ATTCTTAAGACACAG  44 21
GII78_RS06650 1283431 .. 1283441 +  -2.6  -2.95102   ATATAATATAGAGAA                 TATT TAA AATA                 ATTTGTAAATAAAAT  43 43
        allD NONE
GII78_RS06660 NONE
        uxuA NONE
GII78_RS06670 NONE
GII78_RS06675 NONE
GII78_RS06680 1289899 .. 1289919 +    -4  -4.30995   CGATTGACGACGTGA           TGCCCCGTT TTTC AGCGGG-CA            TTCTTTTATAAAGAA  61 26
GII78_RS06685 NONE
GII78_RS06690 1292915 .. 1292937 +  -9.2  -3.82604   GCTATAATAAGAAAA           GGCTATCC TTCAAGC GGATAGCC           TTCTTCATTAAATCA  83 34
        yjoB 1295825 .. 1295849 + -12.9   -5.4756   TTTCACTGAAAGAAA          GCACGGGTGTT TGA AAAACCCGTGC          TTTTTTGTTGCGGTT 100 32
        rapA NONE
        phrA 1297228 .. 1297255 + -14.4  -4.20918   ATCAAACATGATGCA        TAAAAAAGACCC TTAG GGGTCTTTTTTA         TTTCTTCAGCTTCCA 100 30
GII78_RS06725 1298586 .. 1298621 + -18.6  -3.08798   AGGAAAAGCTGTAAA    TGAAAAGACGGAAGCT GTGA AGCTTCCGTCTTTTTA     TCTTACATACAAACT 100 27
GII78_RS06735 1299686 .. 1299697 +  -2.2  -4.42386   CGATATGTGGAAGCC                GTCA AGCT TGGC                 TTTTATACATAAAAC  58 2
GII78_RS06740 1300633 .. 1300657 + -12.2  -2.67439   GTTAGGTTCTCTTCT          GGGCTGAGGA ATATA TCCTTAGCCC          GTATTTGATCAGATT  83 36
GII78_RS06755 NONE
GII78_RS06760 NONE
GII78_RS06765 NONE
GII78_RS06770 NONE
        xkdD NONE
        xtrA 1304501 .. 1304546 + -19.3  -5.63517   AAGACGGAAAGCCTG CGGACACTGATCAACTGCACAG CAT TTGTGC-GTTGATTGGTGTCCG TTTTTTATTTGCCAA 100 61
GII78_RS06785 1305141 .. 1305161 + -10.4    -4.431   GAGCATGACACATAA            GCGGCTGG CATGA TCAGCCGC            TTTTATGAATAAATA  95 76
GII78_RS06790 NONE
GII78_RS06795 NONE
GII78_RS06800 NONE
GII78_RS06805 NONE
GII78_RS06810 NONE
GII78_RS06815 NONE
GII78_RS06820 NONE
GII78_RS06825 NONE
GII78_RS06830 NONE
GII78_RS06835 NONE
GII78_RS06840 NONE
GII78_RS06845 1314384 .. 1314406 +   -15  -4.58395   AATCAAGCCCATACG           CAGACCTTTC TCA GAAAGGTCTG           TTTTTAAAAGATGAA 100 50
GII78_RS06850 1314918 .. 1314948 +    -4  -3.18728   GATGGGCATAAAGAA      GC-CGTGTATCTC TACTAT GCGATGCACGAGC       TTCACTATTCCCCAT  48 46
GII78_RS06855 NONE
GII78_RS06860 NONE
GII78_RS06865 NONE
GII78_RS06870 NONE
GII78_RS06875 1322001 .. 1322019 +  -4.5  -5.19879   AAGGTATAGACAAAA             CCGCTTC AGTAC GAAGGGG             TTTTTATATTTAGCA  76 32
GII78_RS06880 NONE
GII78_RS06885 NONE
GII78_RS06890 NONE
GII78_RS06895 NONE
GII78_RS06900 NONE
GII78_RS06905 NONE
GII78_RS06910 NONE
        xepA 1328171 .. 1328184 +  -5.3  -4.11216   CGGTAAAAGGGACCG               CTGTT TCAT AACAG                TTTTGGCCCTCGGAA  65 15
GII78_RS06920 NONE
GII78_RS06925 NONE
GII78_RS06930 1329698 .. 1329724 + -13.8  -5.64873   TGATCACAGACCATA         AAAATCCCGGAG CTG CTCCGGGATTTA         TTTTTTCTTCTTCAA 100 38
GII78_RS06965 1335548 .. 1335569 + -13.7  -5.79595   AATTGTGATTCATTT           GCCTTCCGG CGCG CCGGAGGGC            TTTTTTATTTTGGGA 100 40
GII78_RS06970 NONE
GII78_RS06975 1338891 .. 1338915 + -17.9  -4.95155   TGTCATAACCTTAAA          CCCCCTGTCCG TAA TGGACAGGGGG          TTTTTATGCTCTGAG 100 33
GII78_RS06985 1341745 .. 1341764 +  -7.2  -5.64274   TTGGTAAACAGACAT            GAATCCTT GAAA GAGGATTC             TTTTTTTATCACTGA 100 24
        dppA 1342678 .. 1342689 +  -4.4  -2.64099   CATGACTGAGCTTGC                GATG CGGA CATC                 ATTCTGCTAAAGGGG  47 4
        dppB NONE
        dppC NONE
        dppD NONE
        dppE 1347293 .. 1347320 +  -7.8  -5.61913   CGGTGATTGAGGAAA        TACTGCTTCTTT ATGC GAAGGAGCGGTA         TTTTTTCTCTTTCTT 100 44
GII78_RS07015 NONE
GII78_RS07020 NONE
        eepC 1350280 .. 1350292 +  -3.3  -4.59773   AAAAAGAATTATGTG                CGGTG CGC CGCTG                TTTTTCAGAATAAGG  64 0
GII78_RS07030 1351315 .. 1351342 +  -8.5  -2.60809   TAAGATAAATAAAAA        GAGTGGCTC CTTTTTACTA GAGCCACTC         CATTTGTTTATACTT  65 33
GII78_RS07045 1354036 .. 1354058 + -10.7  -5.77632   TTGGTGAACGTTAAA           CCCAAAACA TAAGT TGTTTTGGG           TTTTTTTGTACTTTT 100 34
        hmpA 1355480 .. 1355501 +  -8.8  -5.46657   AACACATACATGAAA           CTCTTCTC CTTTCA GAGAAGAG            TTTTTTATTGAGATA 100 40
GII78_RS07060 1356647 .. 1356667 +    -4  -6.04324   ATAACAATTAAGATG            GCTCTC TCTTGTAAT GAGAGC            TTTTTTCTTTTTTAA  93 30
GII78_RS07065 NONE
GII78_RS07070 1357904 .. 1357942 +  -6.7  -6.09196   ACGGAGGGAAAAAAG  CCCGGGAGAGTCAATCTC ATGT GAGAC-GACTGTCCGGGG   TTTTTTTGTTTTCGG 100 160
        ykkC NONE
        ykkD 1358650 .. 1358664 +  -2.9  -3.14647   ATTCTGTCATAAATT               GATTT TTATC AAATC               TTCAGTATAATGGAT  45 29
        purU 1359901 .. 1359934 + -13.3  -5.88565   GTGGTACCACGGAAA     CCCATTTCGTCCTTA TGAA TCAGGATGAAATGGG      TTTTTTTATTGTAGA 100 307
        proB NONE
        proA 1362349 .. 1362371 + -10.7  -5.24129   ATGTTCAATGAAAAA           GCTTATCTC ATTAC GAGATAAGC           TTTTTTATACGCGAA 100 48
GII78_RS07100 1362883 .. 1362911 +  -7.4  -5.52986   TGCTGAATAAATAAA        AAGAGGATGCCT GTACA AGGCATCCTCAA        TTTTTTTGATGGAGT 100 31
GII78_RS07110 1363912 .. 1363933 + -13.1  -5.58454   TAAAATAATGACCGG           CATCCTGAG TGTT CTCAGGATG            TTTTTTTGGTGTCGG 100 33
       rsbRB 1369526 .. 1369546 + -14.1  -5.31275   TCATCAATAAAAAAA            TCCGCTATC TGT GATAGCGGA            TTTTTTATGATGCGA 100 31
        ykoG NONE
        ykoH NONE
GII78_RS07170 NONE
GII78_RS07175 1376775 .. 1376792 + -14.1  -4.77036   GATGACTAATCAAAA             CCCCCGC TGCA GCGGGGG              TTTTTCATGATAAGA 100 32
GII78_RS07180 1376981 .. 1377008 + -11.4  -3.15231   ACGAGACACAAACAA        CAGAATAAGGGC TTAG GCCCTTGTTTTG         TTCCGTAATTGTGAT  84 18
        mgtE 1378858 .. 1378881 +  -8.1  -5.00196   TTATAAACGTAAAAA          GTCCGTCTC AACTGC GAGCCGGAC           TTTTATTATTTAACG  95 35
GII78_RS07200 NONE
        ykoL 1379828 .. 1379853 +  -9.2  -5.79588   AAATCATAAAAATTA         TCCTTATACA AGATAA TGTATAAGGA          TTTTTTTGCTTTTAG 100 10
GII78_RS07210 1380449 .. 1380470 +  -8.1  -6.23545   TCGTTAACTATTCTA           CACTCT-CTG TTT CAGGAGAGTG           TTTTTTTTGTTTCCA 100 34
GII78_RS07220 1382215 .. 1382239 +  -2.2  -5.28481   ACCTATCAAAAAAAA         GACTGATGC CTCGGTCA GCA-CAGTC          TTTTTTGATTAAATC  73 20
GII78_RS07230 NONE
GII78_RS07235 1385983 .. 1386005 + -12.1  -5.08601   AGTTAAACACGGAAA           GAGCTGACT TCATT AGTCAGCTC           TTTTTCTTCAACTGA 100 35
GII78_RS07255 1392066 .. 1392076 +  -6.8   -2.9175   ACGTTGACAAATCAT                 TGCG CTG CGCA                 TATCATTGACGTATA  58 34
GII78_RS07260 1393116 .. 1393137 + -13.1  -5.19879   GGGCGTAATCTGAAA           GACTCTGCT TAAA AGCAGAGTC            TTTTTGTGTTTGAAG 100 33
        sigI NONE
        rsgI 1395730 .. 1395752 +  -9.8  -3.03771   TCAGTTCTTCAAAAC           GGTGACGGAG ACG CTCTGTCTCC           TGTTCGGCGATCTCC  71 486
        htpX 1397389 .. 1397410 + -13.1  -5.86976   TACAAACACATTGTT           CCTCTGAGA GAAT TCTCAGAGG            TTTTTTATTTTATCC 100 41
        ktrD 1398903 .. 1398921 + -10.3  -5.26875   ATCGGATAGGCAAAA             CACCGCA TACTT TGCGGTG             TTTTTTGATTGCCAA 100 32
GII78_RS07295 NONE
GII78_RS07300 1399386 .. 1399416 + -14.8  -3.75763   AACAAAAATAAAAAA       GACCTCTTAGGCGG CGT CCGCTTAAGAGGTG       CTTTTTCTATTTTAA 100 30
        kinE NONE
         ogt NONE
GII78_RS07320 1403617 .. 1403651 +  -4.9  -5.14965   AAAGAAACAAAAAAA    CCGCT-GACTCGGCCC AAAT GAGCAAAGTCCAGCGG     TTTTTTAATGCACCT  79 19
        mtnE 1408477 .. 1408507 +  -7.7  -5.22312   GGACGAGAAACGAAA      CCTCTTTAGAC-GC GATT GCAGTTTGAAGAGG       TTTTTTGATATGGAT  93 182
        mtnW NONE
        mtnX NONE
GII78_RS07355 1411031 .. 1411044 +  -8.1  -3.05384   GAAATTGAAAACACT               CCAGC ATCA GCTGG                TTAAATAAAAGGAGG  67 4
        mtnD 1411614 .. 1411634 + -16.9  -5.28414   AATAAGCATGAGAAA            GCCCCGTTC ATC GAACGGGGC            TTTTTATATTTATTG 100 36
       spo0E 1412451 .. 1412471 +  -6.1  -5.67063   ATGCATATATAAAGA            GAGAGCTTT TCG GAAGCGCTC            TTTTTTTCTGGTAAA  91 52
GII78_RS07375 1412945 .. 1412967 + -15.6  -3.29144   CACGAAGATAAAAAA           CCCTCCTGAC ATG GTCAGGGGGG           TTATGAAGCGGATAC 100 30
        mhqR 1415124 .. 1415150 +  -5.2  -5.38348   TAATAAGTAAAAAAA         GGAAGCCT GATATGTCACA AGGCTTCC         TTTTTTGCTATTTTT  84 31
GII78_RS07405 1420801 .. 1420822 +  -5.1  -5.69068   AAAAAACTAAGGACG           AGCTGTATC CTTG GATACGGCC            TTTTTTATGTTTTTC  88 208
        queC NONE
        queD NONE
        queE NONE
        queF 1423446 .. 1423464 +  -9.6  -5.61277   ACAGAAGCAGATTAA             GGCGTACA ATT TGTACGTC             TTTTCTTTTTTTATC 100 200
GII78_RS07435 1425091 .. 1425135 +  -8.1  -3.52506   CTTGAAGAAGTCGCA TAAAAAAGTCGTTTTCCTT AAAGGAC AGGGAATTCGACTTTTTTA TGTTTGAATTTGATT  72 95
        ykvP NONE
GII78_RS07445 NONE
GII78_RS07450 1428454 .. 1428473 +  -2.8  -4.65895   ATCGACCATATAGTT            TCTCCTTA GAAA TGAGGGGG             TTTTTACATAAAAAA  62 501
GII78_RS07455 1428982 .. 1429000 +  -7.4  -5.36441   GGAAATAGACAAAAA             CGCCGATT CAT GATCGGTG             TTTTTTATGTAAAAA  95 13
GII78_RS07465 1429661 .. 1429682 +  -9.5  -4.96762   AGCCAAGAAGCTGAA           GGTTTCTCA TACG TGAGAAGCC            TTTTTATCATGTATG 100 27
GII78_RS07470 1430585 .. 1430615 +    -9  -6.02914   GTTTTTGCCGTCTAA       GCATAGAAGAGACA ATT TGTCTCAGCTGTGC       TTTTTTTTATATAAA 100 26
        ykvU NONE
        stoA 1432587 .. 1432608 + -10.2  -5.21709   ATGGACGGTAGAATA           GCTGAGAG CATAGA CTCTCAGC            TTTTTTCATATAGAG 100 25
        pfeT 1434738 .. 1434763 + -13.3  -5.03994   GACTCCTAAAATAAA         ACCAGCAGCCT AATC AGGCTGCTGGC          TTTTTATGTATCAAG 100 27
        papB 1436251 .. 1436273 +  -2.6  -5.38951   AATAGAAATAAAAAA           GGACTTTGTT CTC GACATCGTCC           TTTTTTATCTGCATT  74 39
GII78_RS07500 1437465 .. 1437476 +  -4.4  -2.67667   TGGATTACCGTCTCA                TCGA AAGA TCGA                 CTGTTTAGTGAATGC  47 6
        glcT 1438477 .. 1438493 +  -4.4  -4.17048   ATTGAGGGAAAAAAA              CGGGAA GTTCA TTCTCG              TTCTTTTGCGCACCC  61 89
        ptsG 1440755 .. 1440780 + -14.1  -3.58365   AAGGGTGTTAGTACG         CCGTGCTTGTC AGAT GACAAGTACGG          TTGTATGATATAATA 100 39
GII78_RS07515 NONE
        ptsP 1442828 .. 1442851 + -13.2  -5.53991   AGTAATGTACAAAAA          CCAGAC-GGCC TCC GGCCTGTCTGG          TTTTTTTCATAAGTA 100 36
        splA NONE
        splB 1444256 .. 1444277 + -10.9  -4.03995   ATATTTCACTTAAAC           GGGCTGTTG TGAT CAACAGCTC            TCTTTTTATAAAAAG  89 28
GII78_RS07540 1447060 .. 1447085 +    -7  -5.86976   TGTAATCCAATTACA         TCCCCAA-ACA TCATT TGTTTTGGGGA         TTTTTTATTTTATAA 100 36
GII78_RS07545 1448059 .. 1448083 +   -13  -6.25741   GGTGAAATAAAAAAA          GATTGCCTGT ACGAA ACAGGCAATC          TTTTTTTTATTATTT 100 31
GII78_RS07555 1451333 .. 1451360 +  -5.6  -4.87892   AAAAAATAAAAAACA        GGGTGCACAA CGAAAAGA TTGTGTGCCC         TTTCTTTTATTCAAA  75 32
        kinA 1453313 .. 1453332 +  -9.3  -4.02736   TCCAAAAAAATAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT  85 28
GII78_RS07575 1455987 .. 1456014 +  -9.2  -5.45802   TTGAATAAATAAAAA        CAGCCGTTGCC AGAAAGA GGC-ACGGCTG        TTTTTATTTTAAAAG 100 33
GII78_RS07600 NONE
GII78_RS07605 1461587 .. 1461600 +  -5.9  -6.48081   GACGGACTGATTTAA               CGGCT GAAA GGCCG                TTTTTTTTTTATGAA 100 26
GII78_RS07610 1462487 .. 1462505 +  -4.5  -3.54741   AAGATTCCTGAAATA             GGGGGAA CAAGC TTCCGCC             TTTGCAAAAGTAATC  55 39
GII78_RS07615 1463186 .. 1463199 +  -3.1  -3.57615   GCGGTAGAGCTGAAA               GTAAG TTGT CTTGC                TTTCAGAGGTATTCA  50 110
        abbA 1463450 .. 1463469 +  -6.5   -5.4505   GGACACCCTATAATT            GATACTC CACAAA GAGTATC             TTTTTTATTGAAAGG  93 43
GII78_RS07625 1464011 .. 1464026 +  -5.4  -5.20333   CGCTCGTTGAATAAG              TAGGCT GTAC GGCCTA               TTTTTATTATAGCTA  81 23
        ccpC 1465041 .. 1465057 +  -8.7   -6.5058   AAAATCCATTTTAAA              GACAGCG AGG TGCTGTC              TTTTTTTTTATTTAT 100 27
GII78_RS07635 NONE
GII78_RS07640 NONE
GII78_RS07645 1466993 .. 1467015 +  -5.5  -5.94214   TCTGATCACTCACTG           GGAACTGCT AAAAC GGCTGTTCC           TTTTTTTCTTGTCTT  91 36
        dapD 1467817 .. 1467839 + -16.4   -3.7732   AAGTTTGATAAAAAA           GGCGTGGATA ATA TATCCACGCC           TTATTCGTATAGGCA 100 45
GII78_RS07655 NONE
GII78_RS07660 1469304 .. 1469328 +  -8.6  -5.16038   AATTCAGTAATATAA          AAACCGAAGC AAAAA GCTTCGGTTC          TTTTATTTATTCTGT 100 31
GII78_RS07670 1470939 .. 1470960 +  -4.4  -3.41366   CCAAGAACGAAAAGC           GGTCTAGC ATATTC GTTAGGCC            TCTCTTTTAAAATAG  53 47
        ykuV 1471465 .. 1471479 +  -8.6  -5.72622   AGTATTTCCTAAAAA               CCTGAT CAC ATCAGG               TTTTTTATTTGTGCA 100 55
         rok 1472490 .. 1472511 +  -9.5  -5.80364   AAATATAAAGAAAAA           CTGCTTG-GC ATC GCTCAAGCAG           TTTTTTTATTGAGGT 100 39
GII78_RS07690 NONE
GII78_RS07695 NONE
GII78_RS07700 NONE
        mobB NONE
GII78_RS07710 NONE
GII78_RS07715 1477783 .. 1477806 + -11.7  -5.14985   AGCGGGGGATGAAAA          CCGGACGGC ATTTCA GCCGTCTGG           TTTTTCTGTATTTCA 100 29
GII78_RS07720 NONE
GII78_RS07725 1481596 .. 1481611 +  -7.6   -4.6526   GAATAATATGAAAAG              CCTTCA ATAT TGAAGG               TTTTTGGAAATTTAT  84 35
GII78_RS07730 NONE
GII78_RS07735 NONE
        yknY NONE
        skiZ 1485413 .. 1485433 + -14.1  -5.88197   CTGCGTTATGAGTAG            CCTCATGCA ACA TGCATGAGG            TTTTTTTATGTTTAG 100 26
GII78_RS07750 NONE
        pfkB NONE
GII78_RS07760 1489289 .. 1489311 +  -9.2  -5.18726   AAAATAAGAAAAAAA           GCGTCCTT GGTTCGA AAGGACGC           TTTTTCTTATCCGGC 100 34
GII78_RS07765 1490010 .. 1490036 +  -8.7  -5.45802   CAAACAAAATAAAAA        CGCCTTGCTGGC CTAG GACAGCA-GGCG         TTTTTATTTTGAAAA 100 29
GII78_RS07775 1492117 .. 1492132 +    -9  -5.53991   ACGCGGAATAAAAAA              GCAGAG ATTT CTCTGC               TTTTTTTGATACCTA 100 30
GII78_RS07780 1493086 .. 1493103 +  -8.4  -4.99947   AGAAAAATAAAAAAA             GGAGGC GAAAAA GCCTCC              TTTTATTTACTTAAA  95 31
        abhA 1496275 .. 1496297 +  -9.9  -5.08824   AATTATGCTAAAAAA          GGCGGA-GTG ATAT CACCTCCGCC           TTTTTTGCGTGCCAA 100 41
        kinC NONE
GII78_RS07810 1498607 .. 1498618 +    -3  -2.85351   GAATATGATAAAATT                TGAT CAAT ATCA                 TGTCATATAAAGGAG  42 54
        ktrC 1499319 .. 1499335 + -10.1  -4.90906   TAGCAGTCAAATAAG              CCGTCCT CAA AGGGCGG              TTTTTCATATTATCA 100 38
         ade 1501199 .. 1501223 + -20.1  -5.42259   TCACTGCAATAAAAA          GAGGCACTCCC TTA GGGAGTGCCTC          TTTTTTTAAACCTCC 100 29
GII78_RS07835 1504275 .. 1504297 + -13.4   -5.0916   TTTTAAAATAAAGAA           ACGGCTGGCA TTG TGCCAGCCGC           TTTTTCTATTAGCGC 100 30
GII78_RS07850 1506007 .. 1506025 +  -8.9  -5.09225   CTATCGTGTGAAAAA             GAGCTGA CTCGA TCAGCTC             TTTTTTGAATGAAAT 100 19
        pdhA NONE
        pdhB 1508550 .. 1508573 +  -8.2  -3.41569   AAACTGAATAATCGA          GAGGGAAGAT GAAC GTTTTCCCTC           TATTATATATCTGTT  70 43
        pdhC NONE
        lpdA 1511408 .. 1511431 +  -7.4  -6.09196   TTTTCATATCAAAAA          CAGCCCTCTCT CAA AGCG-GGGCTG          TTTTTTTATTTTGAC 100 41
GII78_RS07880 1512356 .. 1512378 + -17.8  -5.84011   GAAGAGTAAAAAAAA           GCATGCGGCT TAA AGCCGCATGC           TTTTTATTTTTTATT 100 32
GII78_RS07890 1514309 .. 1514350 + -15.3  -3.53718   CGCGAAGATTAAGAT GTAAGAAAAAGAGCCGGGG GATA TCCCGGCTCTTTTTTATGC  TTGTGATACTTTTTG 100 22
GII78_RS07900 1515429 .. 1515448 +  -5.7  -4.65895   AAGCGATAGTGAAAA            CGAACCG CATGAA TGGTTCG             TTTTTACGTGAGAAG  73 43
GII78_RS07905 1516333 .. 1516363 +  -2.5  -2.65538   ATTTGAAGAGTATCT       TCATGCTCGGAAG TAGGC CATTTGAGCAGGA       TGATCTCAGCTTGTT  41 10
GII78_RS07910 1516843 .. 1516863 + -14.1  -3.49924   GGGTTCAAATAAAAA            GCCTCTCAA ACA TTGAGAGGC            TTCTGATGATTTGAA 100 66
GII78_RS07925 NONE
GII78_RS07930 NONE
GII78_RS07935 NONE
        sigQ 1523012 .. 1523036 + -12.2  -4.66833   GCTGATATAAAAAAA         GCGCTTGTCCG ATTC CGG-CAAGCGC          TTTTTCACATTAAGC 100 31
        typA NONE
GII78_RS07960 1526439 .. 1526473 + -17.4  -3.39727   GACAGTCTGCAAAAT     CATAAAAGACTCAGCT GAA AGCTGAGTCTTTTTTG     TGTTCTGTATGGTTA 100 21
GII78_RS07975 1528880 .. 1528892 +  -7.7  -2.90345   AGATCAGGTCTCGCC                CAGCT CGC AGCTG                ATTTGCTGTAACATT  64 2
        glsA NONE
GII78_RS07990 1530813 .. 1530835 +  -4.2  -5.60993   AAATAAATGATAAAA           CTCAAACT TATTAAC AGTTTGGG           TTTTTTTATAACCGC  86 35
        ftsW 1532237 .. 1532253 +  -2.2  -2.84173   AAACAAGTGTGTACA              GGGGAA GGATA TTCCGC              TATGATAGATTATAT  41 42
         pyc 1535747 .. 1535778 + -11.8  -5.71712   AAAAGCATAATAAAC      AAAGAGTGTATATC ATTT GATATACACTCTTG       TTTTTTTATATAGAA 100 31
GII78_RS08010 1538451 .. 1538466 +  -3.3  -2.90496   ACATAGATGGCATTT              TGAGT AAAAAA ACTCA               TAATTTAAGAGAAGA  44 140
        coxB NONE
        ctaD NONE
GII78_RS08025 NONE
        ctaF NONE
        ctaG 1543429 .. 1543451 +  -9.9  -4.47271   GACGATATCATAAAA           GGTACAGCG AAATA TGCTGTACC           TTTTCGTTACATTTG  91 28
GII78_RS08045 1544471 .. 1544485 +  -3.5  -2.53015   ACAAGAGATTGTGAA               TCGCC ACGGG GGTGA               TAGATTGAAAAATAT  43 90
GII78_RS08050 1545536 .. 1545558 +  -6.9  -5.20783   GCGATGGTAATGAAA           GCCGCGGAC GAATG GTTCCCGGC           TTTTTCTATTTCCAT  90 31
GII78_RS08055 NONE
GII78_RS08060 1546418 .. 1546434 +  -2.9  -5.14563   GACAAAAGATTAAAA              GGCCC CGAAAAA GGGTC              TTTTTTCATGCGGAC  70 28
        ricF 1546979 .. 1546999 + -11.2   -4.2349   GATGTAAAGTGTCCT            GACGAGAC TGGCC GTCTCGTC            TTTTACATATAAGAG  90 24
GII78_RS08070 1547320 .. 1547339 +   -15  -2.96822   TAGCTATAAAAAAAT            CCCCGCAG GCAT CTGCGGGG             TCCTTCTATTCCTTA 100 38
        rsmD NONE
        coaD 1548669 .. 1548690 +  -5.9  -5.83226   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  93 20
GII78_RS08090 1550860 .. 1550871 +  -2.2  -2.97667   AAAGAAATAGAGAAT                TGGG AGGG CTCA                 TAATTTGCTACGTAA  42 11
GII78_RS08095 1551894 .. 1551912 + -13.2  -5.01546   AGCTGAAAGCGAAAA             GCACCTGA GAA TCAGGTGC             TTTTTCTATACATTT 100 18
GII78_RS08110 NONE
        rpmF 1554103 .. 1554124 + -11.5  -5.71295   TAACTAATAAGAAAA           GCGCGGGGT GAAA GCCCTGCGC            TTTTTCTTTTTCTCT 100 34
        gerR 1554840 .. 1554865 +  -5.5  -4.40882   AACGCCTGAAATGAA         CCGGCCCTAT AGTAAGA ATA-GGCCGG         TTGTTTTGATTTCTA  70 44
GII78_RS08130 NONE
        bshC 1558124 .. 1558140 +    -8  -6.24157   TAAAGTTTTAAAGAA              CCCTGA CTAGT TCAGGG              TTTTTTTTTATGGGT 100 43
        mraZ NONE
        rsmH NONE
        ftsL NONE
GII78_RS08155 1562212 .. 1562236 + -11.5  -5.66684   AATCCTGATTAAAAA          GAAAGCTTGCG TTA TGCAGGCTTTC          TTTTTTTATGCCTTC 100 29
GII78_RS08160 1564253 .. 1564276 +  -8.9   -3.8165   AGAAGATGAAAAGGA          GGCAG-CCGA TTGAT TCGGGCTGCC          TATTCTTTTATTGCA  78 13
GII78_RS08165 NONE
GII78_RS08170 NONE
GII78_RS08175 NONE
       spoVE 1569581 .. 1569612 + -13.2   -3.7511   TGGAAACAATTGATG      CGATAACCCTGT CCAACAAA ACAGGGTTATCG       TTATGTTATAGAGAA 100 78
        murG NONE
        murB 1571734 .. 1571759 +   -12  -4.13767   ACTGTAAGCAAACGA         CAAACGGCAT CATAGT ATGCCGTTTG          TTTTGGAATAGACAG  93 74
       divIB NONE
GII78_RS08200 NONE
GII78_RS08205 NONE
GII78_RS08210 NONE
        ftsA NONE
        ftsZ 1577098 .. 1577123 + -14.9  -5.98675   CGCGGCTAAAGTAAA         GGACAAAATCG TTTT CGATTTTGTCC          TTTTTTGTTTTTCTC 100 32
GII78_RS08225 1581705 .. 1581722 +  -9.1  -5.43414   ATTAAGTGGAAAAAA             GCTGCCG TCAT TGGCAGC              TTTTTTATATATCCT 100 36
     spoIIGA NONE
        sigE 1583632 .. 1583644 +  -5.5   -2.7641   AACCCCTTGATTTTA                CAGGG ATT TCCTG                ATTTCGACAGTTTTT  52 57
        sigG 1584524 .. 1584561 + -18.1  -3.24329   ATATTCATCAATAAT   GAAAAGCCTTTAAAACG ATGT TGTTTTAAAGGCTTTTC    TATTGATTACGGATG 100 27
GII78_RS08245 1585574 .. 1585592 +  -8.8  -5.05606   GGAAGCGGTGAAAAG             CGGAGTAC ATC GGACTCCG             TTTGTTTTTATTAAG 100 135
GII78_RS08250 NONE
GII78_RS08255 1587391 .. 1587404 +  -2.3  -5.18561   GATGTGGTAAAATAA               GTGGG AAAT TCCGC                TTTTTTAAATGTTTG  69 141
        pgeF NONE
GII78_RS08265 NONE
GII78_RS08270 1589420 .. 1589445 +    -2  -2.83103   GACGAACATCAGAGG         TGGTAAAGCGA GATGA TC-CTTTATCA         AGTTTTTTCGGTTTT  41 20
GII78_RS08275 1589720 .. 1589743 + -14.6  -3.64703   TGTGACAGTTTGATA          GGGGCTTGGC AGCA GCCAAGCCTC           TTTACATAGAAGGGA 100 41
GII78_RS08280 1590527 .. 1590541 +  -4.2  -3.55072   AGAGTTACGTTTGAA               CGACAA AAA TAGTCG               GTTTTTCAGTTTTTT  55 14
      divIVA 1591399 .. 1591428 + -12.9  -6.14618   GGTACCGCGAGATAA       GCTTTCTCGTCCC TTAT GGGATGAGAGGGC        TTTTTTTATTTTCTG 100 298
        ileS 1594243 .. 1594262 +   -15  -5.60993   AAATAATGCAAAAGA            GCCCGGCT TAAA AGCCGGGC             TTTTTTTGTGCCAAG 100 35
        ylyA 1594731 .. 1594765 + -10.8  -2.56728   AACGGATATCGAATA     TGGTCAGGCACTGT ATGAATA ACAGTGTCTGGCCG     GTTAATATGCCTGAT  77 4
GII78_RS08300 NONE
GII78_RS08305 1596355 .. 1596379 +  -8.6  -5.62045   CACCTTGTCCTAAAA         CCCCTCTATGC TCTG GCA-GGAGGGG          TTTTTTCTTCTATAT 100 148
        pyrR 1597047 .. 1597072 + -10.5    -5.626   GCAGGTCTTTGTATG         CCTCTTTGCGT AAAA AAGCAAAGAGG          TTTTTTTATACAGTC 100 112
GII78_RS08315 1598523 .. 1598546 + -11.8  -5.43866   CTCTATTTAACCGTA          CCCCGAGTCTA TCT TAGAC-CGGGG          TTTTTTTCAGCCTTA 100 107
GII78_RS08320 NONE
GII78_RS08325 NONE
        carA NONE
        carB NONE
        pyrK NONE
GII78_RS08345 NONE
        pyrF NONE
GII78_RS08355 1608134 .. 1608149 +  -6.8  -5.84381   TGATGTACTTGAAAA              CAGGCT GTGA GGCCTG               TTTTTTTATTAATCC  93 79
GII78_RS08360 NONE
        cysP NONE
         sat NONE
        cysC NONE
        cobA NONE
GII78_RS08385 NONE
GII78_RS08390 1614202 .. 1614223 + -14.5  -4.99043   AGAAGAAAGAAATAA           GCCAGAGCA CAAA TGCTCTGGC            TTTTCTTTATGCGGC 100 26
GII78_RS08400 1618767 .. 1618789 +  -8.5  -4.77165   ATGATATAATCTTAG           GGGTAATAG CGTGT CTATTGCCC           TTTTATTATGAGAAC  95 47
GII78_RS08405 1619746 .. 1619757 +    -3  -4.07568   CTTACTAGGCTAAAC                TAGA GACG TCTA                 TTTTACAGGGGGAAC  55 68
        remA NONE
GII78_RS08415 1620664 .. 1620675 +    -3  -3.09878   AGAAAATGCTGGAGG                TTGA ATAA TCAA                 TGTTAGATCCGTCAA  43 18
GII78_RS08420 1620888 .. 1620916 + -10.5  -5.47218   GAATAGTAGCACAAG        TAGCAACCTATAT CAG ATGTAGGTTGTTA        TTTTTTTCCGTGCGG 100 35
       coaBC NONE
        priA NONE
GII78_RS08435 NONE
GII78_RS08440 NONE
        rsmB NONE
        rlmN NONE
        prpC NONE
        prkC 1631212 .. 1631227 +  -3.2  -2.77013   AACAAGGAGGGAAAA              TATGCC TGAG GGCAAA               ATTATTAAGGCGCTA  44 39
        rsgA NONE
GII78_RS08470 1632782 .. 1632808 +  -3.1  -4.84527   AGCAGCTTTAGAAAA        GAGC-TGGGCATA CAA TA-GCCTAAGCTC        TTTTTCCTGTATGCA  67 40
GII78_RS08475 NONE
GII78_RS08480 1633675 .. 1633699 + -12.8  -3.85542   TTCACCACATAAAAA          CGCCTGCCAC ATATC GGGGCAGGCG          TTCATTTTGTTATAC  95 64
GII78_RS08490 NONE
GII78_RS08495 1636208 .. 1636236 + -19.1  -3.68394   TATATAGTTTCTGCA        GAATAGAAGGGCA ATT TGCCCTTCTATTC        TTATGTCTGCTTTTA 100 20
       sdaAB NONE
       sdaAA NONE
        recG NONE
        fapR NONE
        plsX NONE
        fabD NONE
        fabG NONE
        acpP 1643710 .. 1643721 +  -7.2  -4.25458   TCCCGCCGAAACGCG                GGGC TTTA GCCC                 TTTATTCGTGCAGTT  75 55
        rncS 1644572 .. 1644593 +  -8.7  -3.75535   TACGAAACAATAAAA           TCCCCCTTA TGAC TCAGGGGGA            TTTCAGTATGTATGC  78 28
         smc NONE
        ftsY 1649231 .. 1649280 + -14.5  -3.83844   TTAGTGGAAAAAGCC GACGATTAAGAAAAAGGCCCCAA CATC TTGGGGCCTTTTTCTTTTTTATC TTCTTACTTGATAGG 100 17
GII78_RS08560 NONE
GII78_RS08565 1651626 .. 1651646 +    -4  -3.61398   TACCTTTTATGTAAT            CGGTTATA CATGA TAAAACCG            TTGTTAAGAAAAAAC  52 27
        rpsP NONE
GII78_RS08575 1652251 .. 1652271 +  -3.9  -5.40072   ATATTTGACTAAAAG            GGAGAGG GCCGGCA CCTCCCC            TTTTTTTACACGCAA  78 29
GII78_RS08580 1652743 .. 1652755 +  -5.5  -2.62184   AAAAGTAATTGAAAT                TCGCC AGA GGTGA                TCATATGACAAAGCG  51 13
        rimM NONE
        trmD 1654099 .. 1654109 +  -2.4  -3.49419   CTTGAAAACGATGTT                 CCGC TGT GCCG                 GTTTTTGTGGCCAAG  47 112
        rplS 1654516 .. 1654539 + -12.6  -5.60993   GATAACGAACGAAAA          GAGCTTGTTA CCTG TAACAAGCTC           TTTTTTTATACAGAA 100 42
        ylqF 1655488 .. 1655515 +  -9.2   -5.4833   GAACAGCCGACGATG        TAAAGGCGCGCA GAAA TGCGGGTCTTTA         TTTTTTCTTGGCTGA 100 23
        rnhB NONE
GII78_RS08610 NONE
GII78_RS08615 NONE
        sucC NONE
        sucD 1660637 .. 1660659 + -11.3  -3.31915   CGCATTAATAAAAAA           GGGACAGCC GTCAA GGCTGTTCC           TGCTTTTTCTAACAA  82 33
        dprA 1661586 .. 1661604 +  -6.8  -3.57908   GGAACCCTTTTGAAT             TATCGTTT GAC AAACGGTA             TTGTAATATTTAATA  64 28
        topA 1663848 .. 1663869 + -10.9  -4.21954   AACCACAGAAGTAGC           GGTGAGCAG GGTC TTGCTCACC            TTCTTTGTGTGTTAA  90 27
       trmFO 1665276 .. 1665288 +  -5.5  -3.04144   TACCATTTAAAAGCC                CTTCC TGG GGAGG                TATTAGGCATGGAGA  53 72
        xerC 1666209 .. 1666224 +  -6.2  -3.02856   GCATTTAAGAAAAAT              TAAAGG AGGC CCTTTA               TGTCATCTTTTCATG  56 23
        clpQ NONE
        hslU NONE
        codY 1669018 .. 1669036 +  -9.6  -5.95539   CATTAATCACAAAAA             GAACCCTT TTT GAGGGTTC             TTTTTTTATTTCAAA 100 35
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 1675744 .. 1675758 +  -2.8  -2.62184   TTTATGATTCAAGGC               CATTAG GAG CGAATG               TAATGTCCGGCAAAA  41 20
GII78_RS08705 NONE
GII78_RS08710 NONE
        flgD NONE
        flgG 1679092 .. 1679119 +  -9.8   -3.8823   TAAACGTTAAGGAGG        GAGGGGAGGCGA GTAA TCGCTTCTCCGC         TGTTTTATGATTAAA  85 31
        swrD NONE
        fliL NONE
        fliM NONE
        fliY 1681942 .. 1681954 +  -2.7  -2.56864   AAGGAGAGAGATAGA                TTATG GCA CATAG                AATTTTAATTGTAGA  41 49
        cheY NONE
        fliZ NONE
        fliP 1683619 .. 1683631 +  -4.1  -3.08522   ATTTAATTGTGAAAT                CTTTG CTT CAGAG                CTTTTAGGGTAGGTG  47 6
        fliQ NONE
        fliR NONE
        flhB 1685788 .. 1685800 +  -2.7  -3.53012   AAAACAAAAAGTATA                TTGAA TTT TTCGA                TTTAAAAGGAGAGAA  48 22
        flhA NONE
        flhF NONE
GII78_RS08785 NONE
        cheB 1690917 .. 1690938 +  -4.5  -2.67058   AAAAAAGAGAGGGTG           TGATTCAAA TGGA TATGAATCA            GTATTTAGATGTCTT  47 23
GII78_RS08795 NONE
GII78_RS08800 NONE
GII78_RS08805 1694063 .. 1694096 +  -3.9  -3.48378   GAAAAGCTCTTTGTC     GCCTTAGGTGCA-TCA TTA TGAGTACAACTGAGGC     TGTTGTTATAAAGGT  52 5
GII78_RS08810 NONE
        sigD NONE
        swrB 1695972 .. 1695984 +  -4.8  -3.28924   TTTATGCAGAGGGTG                CTGC AGGCG GCAG                TTCTGCACAAAAATG  53 98
        rpsB 1696795 .. 1696823 + -12.6  -5.00616   GTAACCTATTCAAAA        GGTGATAAGAGG GACTG CCTTTTATCACC        TTTTTTCAAGAAAAA 100 37
GII78_RS08830 1697811 .. 1697835 + -13.7  -4.61633   TCTTTTCAGGCAGTA          TAGGGGACACA TTT TGTGTTCCCTA          TTTTTAAAACTATAT 100 70
GII78_RS08835 NONE
GII78_RS08840 1699221 .. 1699257 +  -2.4  -3.29038   TACAATAGATAATAG    TGAAAAGACCCTCT CATGTTTAC AGGGGGTTTTTTTG    TTAATACTGTTGATT  43 53
GII78_RS08845 NONE
GII78_RS08850 1700908 .. 1700924 +  -6.7  -2.87026   TACTTTCTGCTTGCC              CTTTTTT CAT AAAAAAG              TCTAATATGAATATG  58 14
         dxr NONE
        rseP NONE
        proS 1705183 .. 1705205 + -12.1  -3.26188   ATAGAAATAATAGAA           GGTACCTCA TTGCC TGAGGTACC           TTCACTTATGATGTT  87 74
GII78_RS08870 1709565 .. 1709587 + -13.6    -3.524   GTTCTAATATGGAAT           GCAGAATTTC TCA GAAATTCTGC           TTCTATGCATACATA 100 34
        rimP NONE
        nusA NONE
        rulR NONE
GII78_RS08890 NONE
        infB NONE
GII78_RS08900 NONE
        rbfA 1714922 .. 1714948 + -10.9  -4.42976   CTGAATAAAAAAAGA         GAGGATAGGCG TATAT CGTCTGTCCTC         TTTCTTCGTTTATAA  95 33
        truB NONE
        ribF 1716873 .. 1716891 +    -6  -2.52464   GGAAGCCATCCGTTA             TTTCAGCA ATT TGCGGAAA             TAACTTGCAACGCAC  54 4
        rpsO 1717330 .. 1717345 + -10.4  -5.36965   CGATAATCGTAAAAA              GCGGGA GGAT TCCCGC               TTTTTTATCGTATTA 100 35
         pnp 1719625 .. 1719646 +  -8.7  -4.66535   AATGAAAACATAAAA           GGAGCCTGGG AGA CCC-GGCTTC           TTTATTTTGAAGCTT  90 40
GII78_RS08930 1720695 .. 1720705 +  -3.2  -3.64703   GAAGTAACAGATGAA                 GGCA GCT TGTC                 TTTGAATAGGAGGAA  52 34
GII78_RS08935 1721963 .. 1721987 + -14.3  -5.19261   CGTCTTAAAAAGGAA          AGCCTGCTCCA TAA TGGAGCAGGCA          TTTTTTAATCCCTTT 100 33
GII78_RS08940 1722337 .. 1722357 + -11.2  -5.71712   AGAAAACATCTGAAA            CATCGGCT GCCGG AGCCGATG            TTTTTTTATATGGAA 100 72
        dpaA NONE
        dpaB NONE
         asd 1725167 .. 1725200 +  -8.3  -3.08996   TTCTAAAGACGAATA     GAAGAGAGTAAGGC GCTATCA GCC-TGCTCTCTTC     TGTTACGTCCGAATA  67 52
        dapG NONE
        dapA 1727376 .. 1727407 +  -4.4  -4.71418   ACAGTGAAACAAACG      CGGTCATTCTCA CATTCAGC TGAGTTTGACCG       TTTCTTTTACATATT  68 52
GII78_RS08970 1729203 .. 1729229 + -18.2  -5.37345   AGTATAATGACTGAC         TAAAGACCGGAG CTG CTCCGGTCTTTA         TTTTTTGTCCTTCAA 100 34
        tepA NONE
        tepJ 1730317 .. 1730335 +  -7.4  -4.38203   TCCTACAGAAAAAAC             GCAGCC TGTAAAC GGCTGC             TTTCTTCATTATGTA  79 86
     spoIIIE 1732733 .. 1732765 +  -4.8  -4.15657   TCAAAAGAGAAATAT      GATGAGCTCTCTTC TTAAT GAAGGGAGTTCCGC      TTTCTATAGTTGTCA  63 8
GII78_RS08990 1733623 .. 1733642 +  -3.5  -5.95539   AAACGATTCTAAAAA            CGGACGC CTGTAT GTGTCTG             TTTTTTTATTTGCAC  88 29
        bcbE 1734960 .. 1734978 +  -5.3  -5.47399   AGAAAAAAACTTAGG            GACGGTCT AGCC AG-CCGTC             TTTTTTTGCGCTTCC  88 16
GII78_RS09000 NONE
GII78_RS09005 1737719 .. 1737740 +    -8  -4.82901   AAATCATAAACAAAA           CATCCCTC CAGTGT GAGGGGTG            TTTTTCTGCGGAAAG  88 32
        efpI 1738497 .. 1738510 +  -6.7  -3.13164   GCTGGCACTGCTGAT               CCGAA AATA TTCGG                TGTATAGTTTCTTTT  61 27
GII78_RS09015 1738839 .. 1738856 +  -7.7  -5.63645   CACTCACTAGGAAGA             GAGGGGA TTTT TCCTCTC              TTTTTTATGTTTTCC 100 31
GII78_RS09020 1739737 .. 1739747 +    -4  -4.66833   GATCAATCCGGGTTT                 TCAA GCT TTGA                 TTTTTAAAATTGGAA  66 8
        rodZ 1740678 .. 1740699 +  -5.9  -4.65916   TAAAAAGGAAGAAAA           GTCATCTTA ATTA TCAGATGAC            TTTTCTTCACGTCCG  76 16
        pgsA NONE
GII78_RS09035 1742673 .. 1742686 +  -3.1  -3.86307   CGCCAAGAAAAAATC               CGAAT ATGC GTTCG                CTTTTTTCTTGGCAA  55 112
        recA 1743836 .. 1743854 +  -8.9  -5.63645   CAAATGATACAAAAG             GCTGAGT GAAAA ACTCAGC             TTTTTTGTATTTTGC 100 56
GII78_RS09045 1745247 .. 1745263 +  -4.5  -2.80715   GTATTTCCGACACAT              TTACAAT GAA GTTGTAA              CATTTGTTTTTTTAA  48 124
         rny 1746984 .. 1747010 + -12.5  -5.40072   GTAGAGTATGCAAAA         TAAAGTGATGC GCTAA GCATCACTTTA         TTTTTTTGACGGCAA 100 23
        ymdB 1747995 .. 1748016 +  -5.9  -2.66711   AGCAACATCTAATAA           TGATTGTTC TAAT GAACACTCA            CTTATCCATTGTAAA  54 171
       spoVS 1748328 .. 1748356 + -16.9  -5.10877   CAAATAAAGCATTCT        CAACCTGTTTGCG TAA TGCAAACAGGTTG        TTTTTCATTTATTGT 100 44
         tdh NONE
GII78_RS09070 1750813 .. 1750834 + -13.1  -4.52101   CAGCTATTGTAACAA           GAGGAAGAG TTTA CTCTTCCTC            TTTTGATTCCTTATT 100 29
        miaB NONE
        ricA 1752921 .. 1752943 +  -9.9  -5.25656   GCTGTTCTCTCTAAA          CACGGTGCCT TAAC AGGC-CCGTG           TTTTTTCATCATTTT 100 27
        cotE 1753731 .. 1753761 +  -6.1  -5.49569   CTGAAGAATAAAAAA       GGGACTAGGGG AGACAGTAC CCCCAAGTCTC       TTTTTTATATTGATA  91 30
        mutS NONE
        mutL 1758347 .. 1758377 +   -20  -5.67967   TAGCGGGGGTGGTAG       GCATTGATCCATTC TCT GAATGGATCAATGC       TTTTTTTGTACTCCT 100 38
GII78_RS09110 1760653 .. 1760687 + -10.9  -5.47159   GCACTAGTGCGAAAA    GCGATTCTTGTTGGGC ATGC GTCCAA-AAGAGTCGC     TTTTTTATATTCAAA 100 42
GII78_RS09115 NONE
GII78_RS09120 NONE
        fabD 1762749 .. 1762762 +  -2.3  -3.02947   CCCAGCTAAAGCATT               TGCCC CTAT GGCCA                TGTATCTCATCAATC  42 32
GII78_RS09130 NONE
        fabD NONE
GII78_RS09140 NONE
        pksF NONE
GII78_RS09150 NONE
GII78_RS09155 NONE
GII78_RS09160 NONE
        pksJ NONE
        pksL 1799639 .. 1799650 +    -3  -3.59979   GGCTTCTAAAGATAT                GTTT TGGA AAAC                 TTTCAAATAAGAGAG  48 4
        pksM NONE
GII78_RS09180 NONE
GII78_RS09185 1836671 .. 1836694 + -12.4  -4.32951   CTGAGAAAACACAAA          CGCCCCCTCT TTTA AAAGGGGGCG           TTTTGAATGTTATTT  93 37
GII78_RS09210 1841386 .. 1841398 +  -3.3   -5.5762   TTATTTGCCAAGTGA                GGTTG TTC CTACC                TTTTTTGTCTTTCCT  79 103
GII78_RS09215 NONE
GII78_RS09220 1842824 .. 1842848 +  -9.3  -5.47159   GGAGAATAAAGAAAA          CAGACGGTC ACTCACA GGCCGTCTG          TTTTTTATCTTCAGC 100 32
GII78_RS09240 1844462 .. 1844479 +  -2.7  -3.11768   AAAAAAAGGGCAAAA             TGGATAG GTGG TTGTCCA              TGTTGAATGCTATAA  45 59
        miaA NONE
         hfq 1845765 .. 1845790 + -13.9  -4.62783   TCAAGACATGAGGAA         AGGCTGCCGGG GGTT CCCGGCGGCCA          TTTTTAACATGAATC 100 57
GII78_RS09255 NONE
GII78_RS09260 1846562 .. 1846593 + -12.4  -4.13963   TAAAAACGACACCCC      GAGTAGGACGAGAG ATGA TTCTCGTTCTGCTC       TCTTTTTTGGGCCCT  93 74
        nrdI NONE
        nrdE NONE
        nrdF 1850206 .. 1850226 + -12.7  -4.19238   TTTGAAGATGAAAAA            GAGCAGATA TAA TATCTGCTC            TTTTCGGCTTGAAGG  95 14
GII78_RS09280 1850893 .. 1850919 +   -13  -4.96848   TCTTGAATAAAAAAA         CCCGGTTTCTCG CGA TGAGGAGCCGGG         TTTTTCTATGAGACG 100 31
       spoVK 1853325 .. 1853351 + -12.4   -5.2112   GCATCTGGATCTGCA         TAGACCTCTCAG TTT TTGAGAGGTCTG         TTTTTTGCTCGTATT 100 23
        hflX NONE
GII78_RS09300 1856007 .. 1856017 +  -2.6  -4.11295   AGCAATTAATTTAAA                 TTTT TTA AAAA                 TTTCTCTGGATTTGA  55 27
        glnR 1856530 .. 1856542 +  -3.4  -2.98356   TTCATTAATCCGTTA                GCAA CTGTT TTGC                TATATACATTTACCT  45 33
        glnA 1857924 .. 1857950 +  -7.2  -5.32565   GTATTAATCTTTCAA         CCCCTTGGCACT ATT GGTGTCAGGGGA         TTTTTTGATTGGTTA  95 34
GII78_RS09325 NONE
GII78_RS09330 1860665 .. 1860678 +  -3.8  -4.49906   CGGACACTGAGCCTA               CAGC TATAAC GCTG                TTTGTTTCGGTGTTC  63 65
GII78_RS09335 1861583 .. 1861624 +    -8  -5.45802   AGACGGAAAGCCTGC GGACACTGAACCTACAGC ATTAGC GCTGTTTGTTCGATGTCC  TTTTTATTTTGAAGA 100 46
GII78_RS09340 NONE
GII78_RS09345 1863044 .. 1863067 + -10.2  -4.96848   GGTAATAAATTAAAA          GCACTCTCCC AATA GGGCGGGTGC           TTTTTCTGTGAAAAA 100 108
GII78_RS09360 1864404 .. 1864424 + -14.1  -4.66938   ATATTAATAAACAAA            GAGCATCCT TTA AGGATGCTC            TTTTGTCTTACGACT 100 43
GII78_RS09365 1865226 .. 1865242 +    -8   -5.1764   AAGCGAACAAAAGAA              CCCTTC TAACT GAAGGG              TTTTTATATTCTCTG  93 13
GII78_RS09370 1865954 .. 1865974 +  -4.7   -5.4505   ATATAAATTAGTAGA            CGCTTCC AAATGAA GGAAGTG            TTTTTTGTTGAGGAG  88 127
GII78_RS09375 1866787 .. 1866814 +    -9  -3.16039   CCGGAAAAACAAATT        ACCCTCCCGGCG AAAT TGCCGAGAGGGC         TTGGTACGACTGGTT  71 128
GII78_RS09380 1867678 .. 1867690 +  -6.2  -4.57482   AGGCAGATTCAAAAA                GCGC TGGCT GCGC                TTTATTTCTACCTGG  76 275
GII78_RS09395 1869074 .. 1869093 + -11.4  -3.68827   AACCTCGCCCGAAAA            GCCCGTCT CATA AGGCGGGC             TTTAAATAATCCATA  91 48
GII78_RS09400 1870652 .. 1870688 +  -2.3  -2.67016   ATACCGGAATTGAAA    CATTTGCTGAGGGGTTT CGT GAAGCTATCACCAAATG    TCCATTTCAATAGTT  40 176
GII78_RS09405 1871404 .. 1871417 +  -5.3  -2.82742   GATTGACATGGAAAT               TGCTT TCTT AAGCA                TCATTCTGCAAAACT  52 201
GII78_RS09415 1874150 .. 1874176 +   -11  -3.89501   AAGCATATGAAACAA         GAAACCTACTTT TAA ACAGTAGGTTTC         TTTATCGCGGTATTG  89 79
GII78_RS09445 NONE
GII78_RS09450 NONE
GII78_RS09455 1881310 .. 1881323 +  -3.9  -4.14598   AGAGGGATGAAAAGG               GTTAA TCGT TTAAC                TTTGGTTTGCTTAGG  58 124
GII78_RS09460 NONE
GII78_RS09465 1882750 .. 1882760 +    -4  -2.68361   GGTCGGGCTGAGAAA                 TGAA TGA TTCA                 ATTAGTTGTCCATTT  45 156
GII78_RS09470 1883074 .. 1883094 +  -2.6  -3.67517   TACAGATGACTTTCA            GGATTATT GAAAA AATAACCC            TTTGAGGTATTAGTA  50 47
GII78_RS09475 1883955 .. 1883971 +  -5.1  -3.14463   TGATGCGCGCGGGAT              CCCTTAT CTC ATATGGG              TTGATCGAAAGGGTT  53 328
GII78_RS09480 1884778 .. 1884804 +  -2.3  -3.34398   CTTTGGTTTAAAGAA         TAAAAGAAAGC CGCAA GCTTTCAATTA         TCTTTCACAGGCAAA  45 93
GII78_RS09485 1887080 .. 1887091 +    -3  -3.57561   CAAAGTTTATTTGGA                TCAT ATTG ATGA                 TTTCAAAGCTTAAAA  48 1
GII78_RS09490 1889202 .. 1889220 +  -2.4  -4.25848   GATAGGACAGTTTTT             TCGCTTTA GTC TGAAGAGA             TTTTAATAAAGCCTT  57 491
        xylA NONE
        xylB 1893556 .. 1893583 +  -5.5  -5.66229   TGTTTACACACAAAT        AACCCCCTCAC ATTGAC GTGAAGGGGTG         TTTTTTATTGTTACT  88 325
GII78_RS09520 1896264 .. 1896280 + -10.9  -4.41895   TCAGAAAAAACAAAA              TCCCTCT GGT AGAGGGA              TTTTGATTCAGCATT  95 85
GII78_RS09530 NONE
GII78_RS09535 NONE
GII78_RS09545 1900557 .. 1900571 +    -5  -3.23538   CGAGTGCTTAGTATT               TGCGAT AAT ATTGCA               TTCGTAATAAATTAT  53 232
GII78_RS09550 1901452 .. 1901471 +  -3.5  -5.40014   CAAGCTTTTATTTGA            GGTAGCG GTTTAA TGCTGCC             TTTTTATTGTTATTT  76 13
GII78_RS09575 NONE
GII78_RS09580 1904934 .. 1904949 +  -7.6  -5.64873   GAAAAAAACAAAAAA              GAGAGA TACC TCTCTC               TTTTTTATTCTTCGA 100 70
GII78_RS09590 1905953 .. 1905975 + -13.6   -5.4505   TTGATTTCTTTAAAA           GCATGATGAA ATG TTCATCATGC           TTTTTTATTGAGAAA 100 95
GII78_RS09595 NONE
GII78_RS09600 NONE
GII78_RS09605 1910078 .. 1910098 +  -4.8  -5.33866   ATGAATCCCAAGGAA           GAGAAG-GA AACC TCTCTTCTC            TTTTTTATGCATTTA  84 40
GII78_RS09610 NONE
GII78_RS09615 NONE
GII78_RS09620 NONE
GII78_RS09625 1913682 .. 1913705 +  -6.6  -5.58522   AGAGAAAATAAAAAG          TGCACAGGCC AAAG GGCAGGTGCA           TTTTTGTTTTGTATG  93 30
        pghL 1914666 .. 1914690 +  -7.2  -3.51091   ATAGCTACTGAAAAA          TAGGAGGC GATAAGACA GCCTCCTA          TTCCTTATGCTTCTC  67 30
        fosB 1916210 .. 1916243 +    -6  -5.40072   TCTTTTTCCTCCTAT     TCAGGCTCGCACC CAAAAGTCA GG-GCGAGCCTGC     TTTTTTTGAACAACA  89 456
        yneA NONE
GII78_RS09655 NONE
GII78_RS09660 1918375 .. 1918401 + -11.7   -4.2535   ACTTCACTAATATAA         GAGGAATACGG CAATA TCGTATTCCTC         TTTTGCATATACTAT  91 31
         tkt 1920552 .. 1920573 +  -8.8  -5.42164   AGTAAGCTTTTGAAA           GAGGATGA GTCAAA TCATCCTC            TTTTTCTTGTTTATC 100 36
        sirA NONE
GII78_RS09675 1921484 .. 1921509 +  -9.2  -4.17023   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCATTCA  85 65
        ccdA NONE
GII78_RS09690 NONE
GII78_RS09695 1923644 .. 1923665 +  -8.8  -5.63517   AAATGAATTAAAAAA           CCTTTCCT CTTGTC AGGAAAGG            TTTTTTATTTGAGAA 100 30
        acnA 1928098 .. 1928124 + -11.7  -4.83169   CTGATGAATCAATAG         GAAGAGAAGGC ATTTC GCTTTCTCTTC         TTTTTATGACACAAT 100 37
GII78_RS09725 1928656 .. 1928676 +  -6.2   -5.9873   GAAATGGAACGAAAA            CTGGATCT TGATT AGATTCAG            TTTTTTTTATGCTCA 100 11
GII78_RS09730 NONE
        sspN NONE
GII78_RS09740 1929380 .. 1929393 +  -8.1  -6.02919   ACCGTTCTTAAAAAA               CCAGG GAAA CCTGG                TTTTTTTCTTTCTGA 100 30
GII78_RS09745 NONE
GII78_RS09750 1930197 .. 1930217 + -14.1  -5.54885   TCATTTGTAAAAAAA            GAACGCACA TGA TGTGCGTTC            TTTTTTATTGGTATT 100 31
GII78_RS09765 1931766 .. 1931797 + -14.7   -5.0925   AATAGGTGCAGAACT      GCAAAAATCCTTG TAAATT CAAGGATTTTTGC       TTTTTAATTTTAAGA 100 36
        parE NONE
        parC 1936546 .. 1936584 +  -8.5  -5.28826   CATACAGAACAATAA  TAAA--AAACCCGCTCATA CTA TATGAGCGGGTTTCGTTTG  TTTTTTATCAGCTTT 100 26
GII78_RS09785 1939017 .. 1939041 + -15.9  -4.99435   TAAATATAAAACAAA          GCTGCATTCAA TAG TTGAATGCAGC          TTTTTCATTATTGGA 100 43
        eglS 1940817 .. 1940838 + -10.2  -4.95758   TAAGCTTTTTTTTGG           CGGACATC AGTAAC GATGTCCG            TTTTTATCATCTAAT 100 42
GII78_RS09795 1941158 .. 1941202 +  -5.2  -4.93079   GCAGTAAAATTTCAA TTTCTGTCTCACTAACTTAAG TATA CTTT-GATATTGAGACAGAAA TTTATTTATTTTGTT  76 52
GII78_RS09810 NONE
        galU NONE
GII78_RS09820 1946947 .. 1946985 + -10.4  -4.87291   AAACGATAGCTAGCG   GATATGCATAGGGGTG ACTGACG CTCCCCTATGCATATA   TTTTTACTTCCGATG 100 32
        iseA 2001735 .. 2001753 +  -8.8  -5.41359   GTTATATAAGAAAAA             CGCCCG GGATAAG CGGGCG             TTTTTTAATTTGGTT 100 32
         ggt 2004995 .. 2005019 +  -7.9  -5.14965   AAATAAATAAAAAAA          CTGTACTCGCT TCA AATGAGTACAG          TTTTTTCATGCAGAT  93 35
GII78_RS09950 2007131 .. 2007158 +   -15  -3.35616   AATGGAATAAAAAAA        GAAACCGG-CTGG CAG CCAGACCGGTTTC        TCTTATATGATAATC 100 31
        gltC 2014301 .. 2014327 + -11.7  -5.61596   CAATAAAAAAATGAA        CCCGA-GCTTCT ATAT AGAAGCTTCGGG         TTTTTTTCTGCAAAT 100 35
GII78_RS09990 2018337 .. 2018379 +  -3.4  -4.56775   GCAGATAAGGATGAA TGAGATCCCGTTGTTACGAT CAG AATGGACAAATGGGATCTCA TTTTTCGAGGAGGCT  64 33
GII78_RS09995 NONE
GII78_RS10000 2019913 .. 2019929 +  -5.1   -2.7224   AGAGGCTTATTCTTT              TTCTTGC CCC GCATGAA              TGATCTGTGATGTAC  49 191
GII78_RS10030 NONE
GII78_RS10035 2029861 .. 2029893 + -14.2  -3.45231   GAATAAAACAAATCT      GAGGAGAGCGAGAT TCATT GTCACGCTCTCCTC      TGTTTAGCTGTATGG 100 35
GII78_RS10050 NONE
GII78_RS10055 2031723 .. 2031736 +  -6.7  -4.03586   GAAGTAAGCTGTTGA               GTTGC TGCT GCAAC                TTCTTGTATTTGAGA  70 349
        hpaB 2034981 .. 2035000 +  -7.1  -4.20024   AGAACATTGAAAAAA            CAGCGGG AAAAGA TCCGCTG             TTTCGTATTTTTTAT  75 31
GII78_RS10080 2037875 .. 2037903 + -13.1  -3.34357   GCTACTGATATAAAA        GAGGCCCTGCGTT AAA AACGCTGTGCCTC        ATTTTATACTTATAG  95 33
GII78_RS10085 2039265 .. 2039275 +    -4  -4.12857   GTATCGTACTTAAAC                 TTAC TAT GTAA                 TTCTTTGTCATCGTT  59 483
GII78_RS10110 2043065 .. 2043078 +  -3.1  -2.57985   TGATGAAACGGATTG               CACTT ATTT AGGTG                TCACTTACATTATCA  43 41
GII78_RS10130 NONE
GII78_RS10135 NONE
GII78_RS10140 2047014 .. 2047024 +  -8.2  -3.68738   CTTGATAAACTCATG                 CGCC GCC GGCG                 TTATCTCTTCAAATG  69 181
GII78_RS10150 2048931 .. 2048956 + -11.3   -3.1489   TAAACAATGAAAAAA         GCTAATGTCTG CATG TAGACATTAGC          TTGGCTGGTGTTTAG  80 130
         bla 2051554 .. 2051575 +  -9.5  -4.00042   CTTTTTTAACTTCTA           CCGTTCATT TTTT GATGAACGG            TTCTTTCATAAGACC  83 77
GII78_RS10185 2053012 .. 2053027 +    -9  -5.25799   GTTTAAATTTATAAA              GGAGCT TTTT AGCTCC               TTTTTCTCTTGTTTT 100 35
GII78_RS10205 2058385 .. 2058398 +  -8.1  -4.18018   ACAACAATTAAAAAA               GCCCT CATA AGGGC                TTTTGCATAAAACAA  79 30
GII78_RS10245 2061229 .. 2061251 +    -2  -5.08367   CCAACCTCATATACT           TTAATTACTG AAA CTGTAGTTGA           TTTTTCATTTATCTT  71 77
GII78_RS10255 2062685 .. 2062695 +    -4  -4.40572   TAAATTAAAAAATTG                 TTCA AAC TGAA                 TTTTCTGGGCCTTCT  64 204
        rapK NONE
GII78_RS10330 2070788 .. 2070812 +  -9.4  -5.22137   TGATTAATTTATTTA         GCCCTACTCAA ACAT TTGAGT-GGGC          TTTTATTTTATGATT 100 48
GII78_RS10345 2072797 .. 2072821 +    -7  -2.74755   TCTCAATAAGTAAAA          CGCCCAGCAC TTATT GAGCTGGGCA          CTGTTTCATATTTAA  60 28
GII78_RS10365 2076158 .. 2076180 + -16.4  -5.55698   CCTCAATACGCAAAA           GACGTTTGCC TTA GGCAAACGTC           TTTTTTTGCGTTATC 100 241
GII78_RS10405 2081719 .. 2081758 +  -2.2  -4.68994   TACAATAAAGAAAAA  GACATCCTTGC-CCGCT AACAGCG AGTTAAGCAAGGATGTC  TTTTTCAATCATGCT  61 8
GII78_RS10415 2082974 .. 2083009 + -13.5  -3.36515   AGTCTATCAATTTAC    TGACAAAAGCCCAAA AATGAA TTTGGGCTTTTGCCA     TGTTTACACGTAAAA  95 42
GII78_RS10430 2085205 .. 2085217 +  -3.4  -3.15758   CAATATATGCTGTAA                TGGT AAAAA ACCA                TTGATGGAGGGTTCT  47 61
GII78_RS10435 2086214 .. 2086235 + -10.3  -5.02074   GATAAACATTAATTA           GCTTGTAAA TTTT TTTACAAGC            TTTTTTAGCGCATGC 100 29
GII78_RS10440 2087430 .. 2087459 +  -9.4  -5.29445   ATGCCTGATGATAAA       GGAGGTCTTCTA ATATAC TAGAAGGCTTCC        TTTTTATTGTTGGAG 100 33
        desK NONE
        desR 2089277 .. 2089300 + -13.2  -5.08601   GGTTTAAATAAAAAA          GGATCTTGGC ATCT GCCAGGATCC           TTTTTGTTAACCTGA 100 30
GII78_RS10485 2095398 .. 2095422 +  -2.9  -2.99842   AAGATGATCGGAAAG          CGGAATTTT CTTTTCA AAACTTCCG          TATCTCCCTTCTTTT  43 123
GII78_RS10495 NONE
GII78_RS10500 2096339 .. 2096368 + -13.7  -5.03994   TGGTGTAATAAGTAA       TAAGAACAGGGCG CACA TGCCCTGTTCTTG        TTTTTATATATAAAA 100 33
        dhaS 2099064 .. 2099080 +    -8  -6.04953   TGTATTTTTAAAAAA              CTGCTG CATGC CAGCAG              TTTTTTTCTTTCTGT 100 43
        sqhC NONE
GII78_RS10525 2101886 .. 2101905 +  -7.8  -3.53779   GCTCTATTAAAAAAA            GCCCCC CTTTCTCC GGGGGC             TTCGTGTTTTAAAAA  69 31
GII78_RS10535 2104447 .. 2104474 +  -8.5  -5.59534   TTAAATATGCAAAAA        AGGTACATCAC TTTATC GTGATGTACCC         TTTTTTATTATCCTT 100 37
GII78_RS10580 NONE
       rsbRC 2118575 .. 2118599 + -13.7  -4.90869   CTTAAAATTAAAAAA          GGTATAAGGCT TAA GGCCTTATACC          TTTTTGATTAATCAT 100 19
        gerT 2121465 .. 2121487 + -14.9   -5.1356   TCATCCGATAAAAAA           CGGCCTGCA ATCGA TGCAGGCCG           TTTTTATTAATAGAA 100 30
GII78_RS10625 2123931 .. 2123955 + -12.9   -5.1675   CCACAAAAAAAAGAA          GAGAGAGCTCC AAA GAAGCTCTCTC          TTTTTTCATAAATGC 100 53
GII78_RS10635 2125405 .. 2125429 + -14.4    -5.626   TAAGGATATGAAAAA          CCTTAGTCCG AAATC CGGACTAAGG          TTTTTTTATACAATC 100 38
GII78_RS10650 NONE
GII78_RS10655 2128844 .. 2128866 + -17.8  -5.59564   GGGCGCATAAAAAAA           CCATACGCGG CAG CCGCGTATGG           TTTTTTTACATTTCT 100 31
GII78_RS10665 NONE
GII78_RS10670 2131503 .. 2131527 + -12.2  -4.69549   ACCAGACACAATGAA          GCCCGCTTAT CTAGT GTAAGCGGGC          TTTTCATTTTAAATT 100 63
GII78_RS10685 2133476 .. 2133501 + -16.3  -4.53636   AGCCTTAAAACTGCA         GAAAACTGCGG GTTT CCGCAGTTTTC          TTTTCATTATGTCGT 100 33
GII78_RS10705 2135411 .. 2135440 +  -2.9  -3.59979   TTCTGTTCTATGGCC       GATAATGCGAAAG AGTT CTTTTCCATAATC        TTTAACATAAACAAC  50 427
GII78_RS10730 2137904 .. 2137924 +  -2.4  -5.74684   AAATATAAGAAACAA            GGCCACTC TTAAT GAGCAGCC            TTTTTCTTTTTATTA  80 112
        sspC 2143388 .. 2143404 +  -9.4  -4.93898   GTCAATTTCATTAAG              GAGGGG TAAAC CCCCTC              TTTTTATGCTCCTCT 100 27
        yosA 2157708 .. 2157729 +  -8.8  -5.93252   TCCCTGTTCGGTAGA           CGCCATAA AACTTC TTATGGCG            TTTTTTATTTTTACA 100 73
GII78_RS10990 2163881 .. 2163898 +    -7  -3.31416   ACGGTAGTTAACTAA             GGAGTG CTAGTT CACTCC              TTCCCTCTTTGTTTT  65 34
GII78_RS11100 2183023 .. 2183065 +    -3  -5.05113   CCATATCGCTTTATA TATCACCTTTT-CTTAG CTAATATGTT CTAAGTAGGAGGTGATA TTTTGTTTGTATCGC  68 50
GII78_RS11105 2183869 .. 2183888 +  -5.7   -3.1485   CCTTCCTTCGATTCC            TGGAGAG TGTAAT CTCTCCG             TTACATAGTTCCTTA  55 14
GII78_RS11120 2185726 .. 2185738 +  -4.9  -4.06281   CCAACCTTATATGTT                TAGTT AAA AACTA                TCTTTTATTTAGACT  63 91
GII78_RS11130 2186511 .. 2186537 +  -7.3  -4.62783   AAAAAGAAACCTAAC         GGTAAAGAGTG TTAAT CCCTCTTTGCC         TTTTTAAGATAAATA  81 11
GII78_RS11140 2187251 .. 2187265 +  -9.2  -4.07618   TATTGATTTATTAAG               GGGGGG AAC CCCCTC               TTTCATTATTAGGAG  85 35
GII78_RS11220 2193629 .. 2193655 +  -6.7  -4.01603   GAGATAAAAGAAAAA         TCCATTTAACT AAAAC AGTCAAATGGA         TTTCATATTTAAATC  70 179
GII78_RS11300 2202628 .. 2202647 +  -6.5   -4.7329   TTGCGGTATGAAAAA            GAGCATT TAGATT AATGCTC             TTTTTAAGTAGTTTT  80 16
GII78_RS11375 NONE
GII78_RS11380 2215647 .. 2215659 +  -9.1  -3.09018   ACCCTTGGTACGACT                GGGCT GAA AGCCC                CTTTTGAGATAATCG  70 127
GII78_RS11385 2216269 .. 2216309 +  -8.5  -3.37915   GGGTGCCGTCAATAA  TTAGTTGATTACTGATATT TGG GATATCAGTTCTCGACTAA  TATTCATTTATGAAG  70 208
GII78_RS11395 NONE
GII78_RS11400 NONE
GII78_RS11405 NONE
GII78_RS11410 NONE
GII78_RS11415 2220571 .. 2220617 +    -8  -3.75933   AACACCTTTTTAGAA CGCCCAGCGATGATTGCGGTA CTCCCC TTCCGCTCT-ATTGCTGGGCG TTTCATAAAATGTGT  72 40
GII78_RS11420 NONE
GII78_RS11425 NONE
GII78_RS11430 2224877 .. 2224898 +  -2.3  -2.94232   AATCCTATCTAAAAC           TTCACTTTT GAAG GGAGGTGAA            ATTATTTGACAAAGA  42 29
GII78_RS11435 NONE
GII78_RS11440 NONE
GII78_RS11445 NONE
GII78_RS11450 2228445 .. 2228471 + -11.7  -4.87273   GGAGTCGCTGATCCT         TCCCTTCTCTT TGACT AAGAGGAGGGA         TTTTTATGACATCTT 100 8
GII78_RS11455 NONE
GII78_RS11460 NONE
GII78_RS11465 NONE
GII78_RS11470 NONE
GII78_RS11475 2230960 .. 2230981 +  -5.2  -5.77734   TCGAGCAATTATTTG           GAGGCTAA TTAACT TTAGTCTC            TTTTTATTTTTATTT  88 18
GII78_RS11480 NONE
GII78_RS11485 NONE
GII78_RS11490 2232640 .. 2232677 +  -2.7  -4.87665   ATATGGAATAAGCTA   CAAGAG-GATGGGCTTTT TGA ATAAGTCCTCCCCTCTTG   TTTTTCTAGATAAAA  65 2
GII78_RS11495 NONE
GII78_RS11500 NONE
GII78_RS11505 2234437 .. 2234449 +  -2.7  -3.17699   TATAAAATTAGGAGT                GTTAT AAA ATGAC                TGATTTTGAATTTTG  45 19
GII78_RS11510 NONE
GII78_RS11515 NONE
GII78_RS11520 NONE
GII78_RS11525 2236576 .. 2236591 +  -5.4   -4.5464   TATTCAGAATCAAGA              TTCCTC TTTT GAGGGA               TTTTGCTTATGTATG  73 56
GII78_RS11530 2237195 .. 2237217 +  -7.7  -5.18866   ACATAAAATAAGAAA           GAGGAACGC TTAAT GCATTCCTC           TTTTCTTTGTTTAAA  93 133
GII78_RS11540 2239324 .. 2239344 +  -5.4  -5.73978   AAGAAAGCAAACAAA            GTCGCTCA ATAAC TGAGTGGC            TTTTTTCTTTGTCCT  88 14
        cwlP 2246278 .. 2246297 + -11.4   -5.0916   ATTTCAACATAACAT            GAGTCGGC TAAA GCCGGCTC             TTTTTATATTGGGGG 100 24
GII78_RS11550 NONE
GII78_RS11555 NONE
GII78_RS11560 NONE
GII78_RS11565 2252927 .. 2252954 +  -5.5  -5.31275   CATACGTGAGATAAA        GAGAGATTGGG TTTAGT CCCCTTCTCTC         TTTTTTGTGCTCAAA  86 136
GII78_RS11570 2254107 .. 2254123 +  -5.1  -4.24534   CTCTTAATTTTAGGA              GGTGATG TAA TGTCACC              TTTCTATATTCATTA  65 94
GII78_RS11575 NONE
GII78_RS11580 2254823 .. 2254848 +  -9.8  -5.88061   ACCGAGATAACCCCC         TACCCTTCTC TTAATT GAGGAGGGTA          TTTTTTTCGTTTTTT 100 31
GII78_RS11585 2256322 .. 2256332 +    -4  -4.03995   TCTTGTAAGTGTGTT                 CAAA AAC TTTG                 TGTTTTTATAAGAAC  58 214
GII78_RS11590 2256962 .. 2256978 +  -9.4   -3.4727   AACAACATAAATCAA              GCGAGC AAACA GCTCGC              TTAGTCATTTTTTTG  78 31
GII78_RS11625 2263471 .. 2263481 +    -4   -4.8543   GGGCTTTATCTCAAA                 TTCA AAT TGAA                 TTTTTGTAAGCATTA  69 66
GII78_RS11635 2264266 .. 2264291 +  -6.8  -5.54907   CAGCTTTTTGTACAG         AGCTGGGGTG CGCCAA CACCCTAGCC          TTTTTATTTTATGCA  93 115
        yokF 2268937 .. 2268956 +  -7.9  -5.93252   ATGTGAACGCTAATT            GAAAGCC CTTTGT GGCTTTC             TTTTTTATTTTTAGG 100 28
        cgeA NONE
        cgeB 2281865 .. 2281884 +  -9.4  -5.84381   CGCTTTCTTGAAAAA            TCGTTCAT TGCT ATGAACGA             TTTTTTTATTCATAG 100 30
GII78_RS11745 2284477 .. 2284505 +  -9.6   -4.6526   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTAACACTTTAT  91 29
GII78_RS11760 2286049 .. 2286074 + -10.5  -4.12902   AAACGGTGAAAAAAA         GCACATACCGA TATA TAGGTATGTGC          TTTTCGCAGTGCTTC  89 32
GII78_RS11800 NONE
GII78_RS11805 2293380 .. 2293400 + -12.6    -5.252   AACAGTAACAGAAAA            GCGCAGTC TTCAC GACTGCGC            TTTTTTATGCACGTA 100 39
        metA 2303894 .. 2303906 +  -3.3   -4.0342   ATAACTCCTTACGAT                GCATG AAG CTTGC                TTGTTGTTGATTACA  57 213
GII78_RS11870 2305098 .. 2305120 + -12.8   -5.4659   TAATGGCGTACTTGA           GAGCATACGA AAA TCGTGTGCTC           TTTTTATTTATATTC 100 38
GII78_RS11875 NONE
GII78_RS11880 2305561 .. 2305580 + -13.6  -3.71107   GAGATGACAAATAGA            GGAGAGGC ATTC GCCTCTCC             TATTTGATTTTCATC 100 58
GII78_RS11890 2306178 .. 2306218 + -17.9  -2.84098   TCAGCTGGATGAATT  CAAAGAATAAAAACCGCAG CTT CTGCGGTTTTTATTTTTAG  TGATTGGTTAAGACA 100 16
GII78_RS11905 NONE
GII78_RS11910 NONE
        sspL 2308400 .. 2308441 +  -9.6  -3.05597   CAAAAAAAAGCAATA CAAAACGCTAGAGAAGATC TAAAC GATCT-CTCTAGCGTTCAG CTTTTCAAGCATACG  74 15
        kduI NONE
        kduD 2324878 .. 2324897 + -12.2  -5.16572   CTGACAAATAAAAAA            GCTGACGA ACGA TCGTCAGC             TTTTTTCCATTACAT 100 37
GII78_RS12010 2327469 .. 2327491 +  -9.2  -4.97402   GGCTGAAAGATGAAA           GAAGACGC ATGCAGA GCGTCTTC           TTTTTATGCGTTTTC 100 52
GII78_RS12060 2335408 .. 2335432 + -14.5   -3.6471   CTTTCCAAAAAATAA          GCATGAATGAA CGA TTCATTCATGC          TTCTATCATTTAAAA 100 16
GII78_RS12070 2336221 .. 2336247 + -12.4  -3.13382   TAAAAACAACGAAAA         GAAGACAGCC TTTTACC GGCTGTCTTC         TCTTGCAATTTCATC  87 55
        sspM 2337199 .. 2337221 +   -15  -5.04249   CGCCCTTCTACGTAA           GAAGCAAGGA ATT TCCTTGCTTC           TTTATTTTTTGAGCC 100 26
        recU NONE
GII78_RS12100 2341621 .. 2341643 +   -12  -5.14563   AAATTAAACAAAAAA           GCCGTCACCT TTG GGGTGATGGC           TTTTTTGGTACACAA 100 34
GII78_RS12195 2359312 .. 2359329 +  -4.1  -3.80174   TCATTCCATTTTTCA             TGAAAGC TTGT GCTTCCA              TTCTTCTGGACATCT  55 410
GII78_RS12380 2390995 .. 2391019 +  -9.4  -4.64846   ATCATAACACAAAAA         GCCC-AAACCA CATA TGGTTTTGGGC          TTTTATCATTTATCG  91 34
GII78_RS12470 2407420 .. 2407449 + -16.7  -3.78736   TTGAATAGAAGTAAC       TAAAAAAGCTCCC GAAC GGGAGCTTTTTTA        TTTAATGGATATGTG 100 33
GII78_RS12480 2410107 .. 2410126 + -10.8  -5.97979   CCATAATTAAAAAAA            CTCAAGCT ATAT AGCTTGAG             TTTTTTTATTGTTCT 100 35
GII78_RS12560 2424815 .. 2424838 + -16.8  -3.60395   AACGCAGAAAAAAAA          GCAGAGGCTG ATGA CAGCCTCTGC           TTAATTATTGTATGA 100 15
GII78_RS12600 2430861 .. 2430872 +  -3.6  -4.09508   CTTTGATAATCCCGT                GCCG GTTG TGGC                 TATTTCTTTTTGTCC  58 106
GII78_RS12625 2432518 .. 2432537 +  -3.5  -5.45652   ACCTGGTTTTGCCAA            CCGCC ATCAGCACTC GGCGG             TTTTTTATTGAACAT  79 82
GII78_RS12635 2434171 .. 2434188 + -12.7  -4.91657   ATTCAAATAAGAAAA             GCGCCGA AAAA TCGGCGC              TTTCTTTTATTGCTT 100 31
        ansR 2455080 .. 2455093 +  -2.5  -3.51563   TCAGCTGACTGCACA               TATAA TTCA TTATA                TTCTCTGCCGATTTT  48 515
        mciZ NONE
GII78_RS12775 2457505 .. 2457526 + -12.3  -4.69415   CTCATAGCAGAAAAA           CCAGCACCT GTAC GGGTGCTGG            TTTATTTATATTGAT 100 34
GII78_RS12785 2458836 .. 2458861 +  -9.8  -5.47159   CAACAGAATAAAAAA         GCGAAAG-GCC TCTTC GGCTCTTTCGC         TTTTTTATGTTACAG 100 30
GII78_RS12825 2463445 .. 2463458 +  -9.5  -3.27525   ACTGTCAGTCTTTCA               GCCGC TGAT GCGGC                TTCCCTTTGAAAACA  75 48
GII78_RS12830 2465481 .. 2465528 +  -5.6  -2.85361   AATGCCCGTCTCCTC CGGCAAAAGGATGCC-TGTCTCG GTA CAACACACGATAACCTTTTGCCG TCAATTTTTCAGTCA  51 287
        proC 2471244 .. 2471264 + -14.1  -5.93252   GATGCAAGACAAAAA            CAGAAGGCA CAG TGCCTTCTG            TTTTTTATTTTTCCC 100 40
        namA 2474109 .. 2474132 + -12.6  -6.20267   CTGGTAATGCCATAA          GAGATATCCT GTAG AGGATATCTC           TTTTTTTATTTTTAG 100 34
GII78_RS12875 2474981 .. 2475006 +  -4.7  -5.77677   ATTAACGTAAAAAAA         GACCGGG CCGTAAGGGATT CCCGGTC          TTTTTTATTATTTTG  88 36
GII78_RS12890 2477878 .. 2477905 + -13.6   -5.0538   AATAAGAAGAAAAAA        GCCGAAAATGTT TACA AGCATTTTCGGC         TTTTTTACGCTGAAC 100 39
        mifM NONE
        yidC 2481974 .. 2481999 + -11.2   -5.5604   GGTGAAATAAAAAAG         CAACCCCGTGC AAAAA GC-CGGGGTTG         TTTTTTGTTACTTGC 100 31
GII78_RS12915 2482877 .. 2482911 +  -8.7  -6.09196   AGGAAATGGAGCTAA    AAAAACCCGA-TGCGG GAAA TCGCACTCGGGTTTTC     TTTTTTTATTTTGCC 100 26
      prli42 2486461 .. 2486471 +  -2.4  -3.35342   CCAAGCGGGTTATCA                 GGAG ATC CCCC                 TTCAATATTTTTCTT  45 316
GII78_RS12970 2491833 .. 2491849 +  -4.3  -3.07962   TGCAAATCCGTTGAC              TCTCCCC TAG GAGGAGG              TCTTACAGTATAAGG  50 66
         bmr 2493066 .. 2493102 + -16.1  -4.12254   GCCAGCACGTGATAA    GAAGCGTATTCTTTGTG TAC TGCAAAGAATGCGCTTC    TTCTTTATACTGATG 100 29
        bmrR 2493987 .. 2494021 + -13.2  -5.04356   TAAAGCATAGAAAAA     GAGCATTTTTTGAA ACAAAAC TTCAAAAAATGCTC     TTTTTGCTTATTTAG 100 41
GII78_RS13025 2504504 .. 2504521 + -12.7  -5.83226   GATAGCTGAAAAAAA             GCCGGAG AATG CTCCGGC              TTTTTTTGTTGCATT 100 36
GII78_RS13075 NONE
GII78_RS13080 2514810 .. 2514833 + -15.4  -5.24449   AGATTAATGTGCAAA          GACTGCCGAA ACGA TTCGGCAGTC           TTTTTTCCCTTTATA 100 34
GII78_RS13220 NONE
GII78_RS13225 2539729 .. 2539747 +  -6.7  -6.19302   CTGTCCGTCTTTTAC             CTAGCTC AATCA GGGCTAG             TTTTTTTTGTTGTGT 100 66
GII78_RS13245 2542628 .. 2542648 + -14.1  -5.48623   AAGAAATAAAGCAAA            CAGCTGTCT GGT AGACAGCTG            TTTTTATTTATCTTT 100 32
GII78_RS13265 NONE
GII78_RS13270 2549533 .. 2549555 +  -4.2  -3.41229   CATTCGACATCATTC           TCGTTTTTTT TGA GAAAATACGA           TTATAATAAAGGTAT  53 50
        sinI NONE
        sinR 2550225 .. 2550259 + -13.8  -4.42386   AGAAAATCACAAAAA    GAGGAGT-AGTGCCT GAGCAG AGGCACTAACTCCTC     TTTTGTCAATAACCA 100 17
GII78_RS13300 2553085 .. 2553120 +  -8.5  -4.46835   ATATTAGAAGAATAT    C-AATAAGGTCCTCCA TTTTT TGAAGGACCTTATTCG    TTTATTTGCGGTTAT  86 20
GII78_RS13355 2560151 .. 2560179 + -11.1  -2.80821   ATAGAAGTAAAAAAA        GCTGAATAGCC CGTGAAA GGCTGTTCAGC        TGCTATCTTTCAAGA  79 17
GII78_RS13365 2561225 .. 2561264 +  -7.9  -4.77036   TGAACAGGTGAAAAA  CCGAAGACAAGCTGATT CGAATA AATCAGCGGATCTTCGG   TTTTTCATCATGCAG  88 41
GII78_RS13375 2562139 .. 2562163 +   -13  -5.44119   CATTAAATGCAGAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA 100 35
GII78_RS13385 2563137 .. 2563158 + -13.1  -4.97405   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATGGCT 100 28
GII78_RS13450 NONE
GII78_RS13455 2574434 .. 2574450 + -12.3  -5.52384   AACACGATAAAAAAA              CAGGCTG ACT CAGCCTG              TTTTTTTCATCCAAA 100 31
GII78_RS13505 2584826 .. 2584845 +   -10  -5.20781   GCTGCTGTATAAACC            GAGGCTGC ATTC GCAGTCTC             TTTTCTTTTGTCATG 100 29
GII78_RS13510 2585255 .. 2585265 +    -4   -3.9009   TCGGCGAAGACACTG                 TTAC AAT GTAA                 TTTGTAAAATAAATT  56 64
        ispG 2586459 .. 2586495 + -16.2  -3.02511   AATTAAAAGAAGAAA   CACAAAAAGCTTGACGG GAAC CCGTCAAGCTTTTT-TG    TGTTAGAAAAATGGA 100 12
GII78_RS13525 2587599 .. 2587631 +   -15  -2.91429   ATACGCGTCAATAAC      TGAAAAAGGAGCCC AAACC GGGCCCCTTTTTCA      TATATACGCATTTTA 100 23
GII78_RS13540 2589468 .. 2589499 + -14.7  -3.27766   AAACAATTTACAAGC      TAAAAAATGGGGG TGTTAT CCCCCATTTTTTA       TTGCTGTAAAATCTT 100 23
GII78_RS13555 2592689 .. 2592704 +  -6.1   -5.1167   GAATGCAAGAATAGA              GCCGT TTGATT ACGGC               TTTTTATATTGCCTT  83 86
GII78_RS13560 2593692 .. 2593712 + -11.2  -5.61596   AGTAAAAGCAAAAAA            CTGAGGCT GTAAA AGCCTCAG            TTTTTTTATAGAAAT 100 22
GII78_RS13690 2617863 .. 2617884 +  -7.3  -5.15969   GGCTAAATAAAAAAA           TCGGTACAT TTTA ATGCACCGA            TTTTTTAGGTTAAGA  90 31
        rpsT 2632307 .. 2632328 + -10.9  -5.77856   TGCATAATATAAAAA           CGATCCTCA ATAA TGGGGATCG            TTTTTTTCATTTCTT 100 34
GII78_RS13770 2633734 .. 2633755 +  -8.7  -5.31059   AACAGCGACTGCCCG           GGCTGCTGA TTTC TCGGCAGTC            TTTTTTAGTTCGTCT 100 39
GII78_RS13790 2638310 .. 2638331 + -11.7  -5.04601   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGATTTCTGCG 100 83
GII78_RS13835 2644074 .. 2644084 +  -5.4   -4.3739   ACATGTGAAGCGCCT                 CCTT AAT AAGG                 TTTTATAACAGCCTA  70 268
GII78_RS13850 2646682 .. 2646707 +  -3.9  -5.71712   GAAGGTGCCAAAAAA         ATAAGGAGGCT TGTT GGCCCCCTTAC          TTTTTTTCTGTCGCA  85 22
GII78_RS13860 2648552 .. 2648571 +  -9.3  -4.24413   AGGATTGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTTATTACTGCA  86 31
GII78_RS13920 2659482 .. 2659512 +  -9.9  -3.85209   TGTCTTAAAGGGCTA       GTAAAGGGATTCT CAACA GGAATTCCTTTAC       TTATTATAGCTTACT  85 81
        rapE NONE
        phrE 2663304 .. 2663319 +    -9  -5.42164   TTCTGATTCCCTTTA              GCCGTT TCAT AACGGC               TTTTTCTTATTTCTG 100 59
        yqcG NONE
        yqxf 2666125 .. 2666151 + -13.8  -5.04868   AGAAGAGTCACTTTA         TAAGCCCCTCTC AAT GAGAAGGGCTTA         TTTTATTTAATTTGA 100 53
GII78_RS13970 2666657 .. 2666678 +  -3.7  -5.97575   GTTGGACTAACCTTA           GTTGAAAAG CCTG CTTCTCGAC            TTTTTTTTCTAGGTT 100 321
        bsrH 2681899 .. 2681918 + -10.7  -5.86976   GCCAACATTTATACC            GACCCGG CGGCAA CCGGGTC             TTTTTTATTTTATGC 100 126
        sknR 2702082 .. 2702098 +  -3.7  -5.51353   TGAATCCTTTACAAA              CCCTT ACGTGAC AAGGG              TTTTTGTTGTTTTTC  81 153
GII78_RS14240 2704397 .. 2704417 +  -3.3  -4.36914   ATTGAAAAACGGGCG            CTGATGAAG ATG TTTCATGAG            TTTTATCGGGCAGAG  62 355
GII78_RS14250 2705005 .. 2705019 +  -2.8  -4.87291   GGAAATACGCAAACA               GATTGT CAG ACAAGC               TTTTTAATTGCAGTG  68 428
GII78_RS14265 NONE
GII78_RS14270 NONE
GII78_RS14275 2709172 .. 2709230 + -25.8  -2.86242   GGAAGGTAATAATGA TGTTTAAAAGGTGTTTTGATCCCTGTCT CAT AAACAGGGGTCAAAACACCTTTTAATCA TCGGTTTCTTTTCTG 100 105
         blt 2719583 .. 2719594 +    -3  -4.54047   ATGATGCTGCAGCTT                TGAA TTAA TTCA                 TTTTCTATAAAGTCA  62 18
        bltD 2720334 .. 2720359 + -11.3  -3.62518   TCATTGTTTAAAAAA         GCCTG-GATGAA AAT TTCATCTCAGGC         TTTAAGCATCTTTAG  84 111
GII78_RS14370 2724186 .. 2724212 +  -6.7  -2.94454   ATTCACAATAAAATA         GAGCAGTAA ACATGTGAG TTACTGCTC         TGCTTCGTTTATTCA  60 110
GII78_RS14445 2737784 .. 2737806 +  -6.3  -5.89827   TTGATAGAGCAAAAA           GCAAACTTC GACAG GCAGTTTGC           TTTTTTTTCGTAATT  93 51
        murI 2739029 .. 2739047 +  -8.8  -5.60993   AACATGAACTAAGAA             GCGGGCTT AAA AAGCCCAC             TTTTTTTCTAACAAA 100 151
GII78_RS14455 2740092 .. 2740108 + -12.3  -5.04222   TAAACACACTTAAAG              GGGGCTT TAA AAGCCCC              TTTTTCATTTCATTG 100 48
GII78_RS14460 2741662 .. 2741673 +    -3  -3.65832   TAAGCCCCGAATTTT                TATG GACA CATA                 TATTTTGCAAGATTT  50 450
GII78_RS14520 2752575 .. 2752599 +    -8  -4.12188   TATCATATTAAGAAA         GACAAGAG-CA TGTT TGTCTCTTGTC          TTTTCCACATCATGC  76 90
GII78_RS14535 2756543 .. 2756563 +  -8.4  -4.29845   TACTGCAAATAAAAA            GATACCAA CATCA TTGGTATC            TTTTAGATTGAGTTC  81 234
GII78_RS14545 2758153 .. 2758176 +  -8.2  -4.96848   ATAAACAAAACGGAA          GCACTGATAA AAAA TAATCAGTGC           TTTTTATATGGCGAG  95 37
GII78_RS14550 2759404 .. 2759430 + -12.4  -3.22298   TCATCGCAGCAAAAA         CCATACCAACTA TTG TTGTTGGTATGG         TTCGTCCTAGATAGG  87 330
GII78_RS14575 NONE
GII78_RS14580 NONE
GII78_RS14585 NONE
GII78_RS14590 NONE
GII78_RS14595 2764052 .. 2764065 +  -2.4  -4.10453   TTTTAGGCCTGCTTT               TGAG CTTTGC CTCA                TTTTCACGCAATTTC  55 341
        adhA 2765979 .. 2765990 +  -3.6  -3.15324   AGGTTAGTCCTTATA                TGGG CTGA CCCG                 CTTTTAATGAAACTC  48 42
        yraA 2766611 .. 2766635 + -12.2  -5.09426   TTAAAATAACGAGAA          GGCACAGACT GTTCG GGTCTGTGCC          TTTTTTAAAATTAAG 100 32
GII78_RS14650 NONE
GII78_RS14655 2776556 .. 2776580 + -10.1  -5.07275   GTGAAATAAAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTATATGTGTCA 100 32
GII78_RS14665 2778283 .. 2778307 +   -13  -5.64274   CTCTTACCCCAAAAA          CAAGGCTTGT ACAAA ACAAGCCTTG          TTTTTTTATGCATAA 100 51
        sigV 2778936 .. 2778950 +    -5  -3.18264   GCGCATTCAATTGAC               GAAGGA GGA TCTTTC               TTAATGGATAAGAGA  53 7
GII78_RS14675 2779820 .. 2779841 +  -4.5  -4.72127   TCGATAAAATAAAAA           CATCCAT CTAAGATT ATGGATG            TTTTCTCTCTTCTCT  71 34
GII78_RS14685 2782461 .. 2782483 + -16.4  -4.90471   TCATATGCAAAGCAA           TCCCGCCAAT CAG ATTGGCGGGA           TTTTATATTTTACAT 100 237
GII78_RS14725 NONE
GII78_RS14730 2793263 .. 2793285 +  -9.2  -5.84381   ACAATAACAGAAAAA           CAGCCATC TCTTGAT GATGGCTG           TTTTTTTATTCGTCG 100 34
GII78_RS14760 2797489 .. 2797521 + -19.3  -4.75954   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT TTA ACCCGGCTGCTTTTG      TTTATTTTAGCTTTT 100 28
GII78_RS14830 NONE
        glnH 2812539 .. 2812565 + -10.9   -2.8372   GAATAACAACCATCC         CGGGATGAGCA GGCGA TGCTCATCCCA         ATTTGATAAGGAGTG  79 35
GII78_RS14840 NONE
GII78_RS14845 2813918 .. 2813939 + -11.7  -4.74103   GGCAAACATAGAAAA           GGATACTCT TTGG AGAGTATCC            TTTTTGCATTAAAAC 100 30
GII78_RS14890 2822209 .. 2822229 + -14.1  -4.94222   AAAATAAAACAAAAA            CAGCCTTGA TCA TCAAGGCTG            TTTTTATGCATTATT 100 34
GII78_RS14920 2828652 .. 2828667 + -10.4  -6.09196   CTTCCAATAAAAAAA              GCTGCC TTTT GGCAGC               TTTTTTTATTTTGAA 100 31
       spoVB 2839725 .. 2839735 +  -8.2  -2.98873   TCCGATAACGGTTAC                 GGGC GGT GCCC                 ATCTTTTTCATCAAT  67 33
GII78_RS14975 2840957 .. 2841002 + -14.2  -3.01416   GGGGAAACAGGTCTT CCACATAAAAAAGAGCGGGC TCACTT GCCCGCTCTTTTTTGTTTGC TATGTATAGCTCCTG 100 18
GII78_RS15025 2849352 .. 2849395 +   -14  -5.42514   AAAAGAAAATATTCT TAAATCAAAAAGGCAGCCGC ACAA GCGGCTGCCTTTATCATGTA TTTTTTACTTTCTGA 100 23
GII78_RS15035 NONE
GII78_RS15040 2850206 .. 2850228 +  -9.1  -5.93252   GCCTCTGTAGAAAAA           CGCAGCGTA GTCGA TACGCCGCG           TTTTTTCTTTTTCCC 100 31
GII78_RS15045 2851830 .. 2851854 +  -8.5  -5.24531   CTGAACATACTAAAA          CCGGCCCGA TATGACC TCGTGCCGG          TTTTTTATGAACGAT 100 37
        nifS NONE
GII78_RS15085 2860017 .. 2860030 +  -5.2  -5.71983   TAAAGACTAAAAAAA               GCCC TCTAGT GGGC                TTTTTTTATAATTGG  88 31
GII78_RS15110 2863599 .. 2863620 +  -5.8  -5.12617   ATATTGCAAAAAAAA           CTCCAGTC ATCATC GACCGGAG            TTTTTTGAATCATTA  83 112
GII78_RS15195 2878732 .. 2878744 +  -4.9  -5.55695   AAGACGTGGACTCGT                TTTCA GCC TGAAA                TTTTTTCTCTTGTTC  88 61
GII78_RS15240 2888613 .. 2888646 +    -7  -5.53991   AATCTATACGATAAA    T-A-AAACCGGTAGAG GATC CTCTACCGGTTTATCA     TTTTTTTGATCGCTC 100 27
        cotQ 2906880 .. 2906902 +  -2.6    -5.093   TAAAGAAGACCACAA           GGGCCGAA CATCTAT TGCGGTCC           TTTTATTGTTTTAAA  70 38
GII78_RS15315 2907506 .. 2907542 +  -6.1  -6.09196   AGACGGCTTTATAAG   GATAGATAAGTGCAGG GGAAGG TCTGT-CTTATCTATC    TTTTTTTATTTTCAC 100 40
GII78_RS15320 2908524 .. 2908548 +   -13  -5.50723   ACCGACAACAAAAAA          CCTCAAATCC TAAAT GGATTTGAGG          TTTTTCTTTTGGTAC 100 50
GII78_RS15385 2918220 .. 2918262 + -18.1  -2.71364   ATGAAAGACCCAGTG TAATCAAAAAGGCGGTGACT GCAT AGTC-CCGCCTTTTTGATTG TCATTACACAGCTGA 100 23
GII78_RS15460 2935721 .. 2935742 + -13.1    -5.252   CGCTCATAGAAAAAA           GCTTGCAGA TTTC TCTGCAAGC            TTTTTTATCAGCCTC 100 32
GII78_RS15475 2939744 .. 2939776 +  -8.3  -3.09823   GACTGAGGAATCTCT      TGGTAAGGCGCTCCG TTT TGCAGCGCCGTGCCG      TATACTTTTACGCCC  66 267
        sspI 2940659 .. 2940676 + -10.5   -5.9218   GAATAAGACATGAAA             CCGGGTG ACAG CGCCCGG              TTTTTTTCTTATATA 100 35
GII78_RS15490 NONE
        glcD NONE
GII78_RS15500 2944675 .. 2944699 + -13.7  -4.50943   AAACATCATGAGAAA          GCCCAAAACAG ACA TTGTTTTGGGC          TTTTGTGCGTTATTC 100 30
        ysdB 2960609 .. 2960635 +   -16  -4.87665   AAACTCGCAAAAAAA         GCAGAAGAGCGT TAA ACGCTTTTCTGC         TTTTTATAAATCAAA 100 11
GII78_RS15600 2963210 .. 2963230 + -12.6  -3.41602   CATAAAATAAAAAAA            GCCAAGGC ATTCA GCCTTGGC            TTATCCTCCGATCAG  93 36
GII78_RS15625 2967960 .. 2967985 +   -12  -5.70761   TAGAGAAATAAAAAA         GCATGATCTC TTCAAC GAGATCATGC          TTTTTATTTTATTTT 100 30
GII78_RS15675 2978729 .. 2978747 +    -3  -4.07568   AATGGAAAAACGAGA             TCGGCAGG AAG CCTGACAA             TTTTAAAGGAGGAAA  55 10
GII78_RS15680 2979622 .. 2979642 + -14.1   -5.5208   TTAATGGCCAAAAAA            CACCGTTCA ATA TGAACGGTG            TTTTTTGTATTATGC 100 37
        ytvI 2993015 .. 2993040 + -12.6  -5.68438   TCAGCAAAAATAAAA         CGGCAGCCGT TTTTTC ATGGCTGCCG          TTTTTTATTTGATGA 100 28
        ytrH NONE
        ytrI NONE
GII78_RS15785 3004624 .. 3004646 +  -8.5  -2.73829   ACAGATGAACACTAA          GAG-AGAGGG TCTC CCCTCTACTC           GTGTTCTTTACATAA  65 26
GII78_RS15795 3006010 .. 3006038 +  -7.5  -3.96483   GCTGAAAGAGATCAC       GCGTAAGGGGCG CCTGAA CGTCCCTTA-GC        TTCTTTCCATCAGCT  74 20
GII78_RS15865 3018613 .. 3018638 + -11.9  -3.63968   CTGAAAAAATAAAAA         CCACCTCCTGA TTCA TCAGGAGATGG          TTTCACGGTTTAAAG  90 41
GII78_RS15940 3030771 .. 3030800 + -18.1   -3.0558   CTTTTTTATAGAAAA       TAAAAGGACAGGC TGAT GCCTGTCCTTTTA        TGATTTCTCATATAC 100 30
        brnQ 3038375 .. 3038396 + -13.7  -4.46212   GTTAATGTCACAGAA           CGCCTGCGT TATT GCGCAGGCG            TTTTGTAATGAAAAA 100 36
        hisJ 3041334 .. 3041354 +  -8.3  -4.99861   AAAATGAGGCAGCGG            CAGCGTTAA ATA TTCACGCTG            TTTTTCTCCTTCCTC  91 208
GII78_RS15990 3042397 .. 3042421 + -10.1  -6.17669   CGCAGTAATATAAAA          GCCCAAAAC TGATATC GTTTTGGGC          TTTTTTTATTTTATT 100 33
        rpsD 3045076 .. 3045098 + -12.6  -5.69473   TAATCGTTTTAAAAA           CCCCTGCCGC TAT GCGGTCGGGG           TTTTTTTATCGTCTG 100 38
        acuA NONE
GII78_RS16025 NONE
GII78_RS16030 3051298 .. 3051317 +  -8.6  -5.25735   GAACAAAGTAAAAAA            CGACCTTT ACGA AGAGGTCG             TTTTTGATTTTTTAA 100 30
GII78_RS16100 3063926 .. 3063961 +  -4.7  -4.37886   CAGAATAAGAAAAAA    GCTTGTCGATCCGGGC TTACT GCTCGT-TCAACAAGC    TTTTATGAAACCTAC  68 33
GII78_RS16110 3065544 .. 3065567 + -12.4  -5.60689   ACAAGCAAAAAATAG          AAGCCGCTGC CTAC GCAGCGGCTC           TTTTTTATTATATCG 100 47
GII78_RS16130 3069570 .. 3069589 +  -9.3  -4.12188   TGCCGTACATGCTCA            GCCAGCT CTCCCA AGCTGGC             TTTTCGACGTAGTGG  80 196
        cysK 3076113 .. 3076148 + -15.6  -4.10161   TGGTCATTTATTTAA    AAAAAGGACTGGCTTC AGCA GAAGCCGGTCCTTTTA     TTTTGCAAGCTCGTA 100 26
        pbuO 3078947 .. 3078966 + -12.2  -5.36441   ATGCATACAGAAAAA            CCCAAACG TCGC CGTTTGGG             TTTTTTATGTAAACA 100 40
GII78_RS16185 3081442 .. 3081462 + -12.6  -4.94902   TGCTTATAAATAAAA            CCCCGCAT TCGAT ATGCGGGG            TTTTTGTCATGCTTG 100 120
GII78_RS16200 3085335 .. 3085349 +  -8.5  -3.78124   TGCAGGGCTAAATGC               CGGGC AATAC GCCCG               TTCTTAATCATTACT  74 4
        opuD 3087091 .. 3087116 + -16.3  -5.28942   CATATTAACAAAAAA         GATCTTTCCGC GCCT GCGGAAAGATC          TTTTTATTTGCGATA 100 33
GII78_RS16240 3094492 .. 3094516 +  -9.4  -4.60255   GAAGCATGTAAAAAA         CCCAAAACCGC TTGC GCG-TTTTGGG          TTTTTCCAACATTAT  91 30
GII78_RS16295 NONE
GII78_RS16300 NONE
GII78_RS16305 NONE
GII78_RS16310 NONE
        melA 3110913 .. 3110934 + -10.2  -5.52347   GAATACAAATAAAAA           CTAGGGGA CCGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 29
GII78_RS16335 3115724 .. 3115746 + -11.3  -4.77165   CCGATTATGTAAAAA           GATCCCGCT CATCC GGCGGGATC           TTTTATTATGAAGAG 100 29
GII78_RS16345 3117888 .. 3117906 + -13.2  -5.19879   AACGATAAACAAAAA             GCTCCAGA ATG TCTGGAGC             TTTTTCTGTTTCACA 100 33
GII78_RS16410 NONE
        mraW 3130051 .. 3130075 +  -9.4  -5.67283   GCCATCGAAAAAAAA          GCTCAGATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAGTT 100 8
GII78_RS16430 3132793 .. 3132805 +  -3.3  -5.93809   GATATTTCGTTCGCT                GGCAG CTG CTGCA                TTTTTTTTGTGAAAC  88 293
        pckA 3139642 .. 3139671 + -13.7   -4.4078   CTCGTATAAAAAACA       AAAGCCAAGAGCA ATTA TGCTCTTGGCTTG        TTTTAATTGACGGAA 100 32
GII78_RS16465 NONE
GII78_RS16470 NONE
GII78_RS16475 3143484 .. 3143501 + -12.7   -5.8187   GGAGGACATAAAAAA             CCCGGCA TATG TGCCGGG              TTTTTTTATTCAATC 100 30
        ytzI 3145535 .. 3145549 +  -6.4  -5.58454   TTGGACTTTTAAGGT               CGGCAT GCT ATGCTG               TTTTTTTGCTGTGAC 100 94
        yidD 3146930 .. 3146960 +  -3.3  -3.36694   AACGTTTTCAGGGAA      CAGCGGGTGATGTT TAAT AACGTC-TACGCTG       TCTTTCACACTCGCT  48 109
GII78_RS16525 NONE
GII78_RS16530 NONE
GII78_RS16535 3150587 .. 3150613 +   -11  -4.74706   GATTTGTAATTAAAA         GAAAGAGCTG CATCAGC CAGCTCTTTC         TTTTTGCATGTTGAG 100 32
GII78_RS16590 3163247 .. 3163269 + -14.2   -4.4267   ATCTCCACGCTGATT           GAACCCCCGA TTA TTGGGGGTTC           TTTTCCGTTTTCAGC 100 24
GII78_RS16600 NONE
GII78_RS16605 NONE
GII78_RS16610 3167713 .. 3167736 +  -7.4  -5.52384   AAAACATAAAACCTA          CAGCTCGTGT TGCA AAACGGGCTG           TTTTTTTGCTGCAGA 100 32
        cotI 3171691 .. 3171707 + -10.8  -4.04579   TTAAACCCATCATTT              CCCCCG CATAT CGGGGG              TTTGATCTTTATAAG  89 37
GII78_RS16635 3172236 .. 3172252 +  -9.4  -4.63527   CTGTGAACAAAAAAA              GCCGCT TATAC AGCGGC              TTTTTCACATCATCG  91 35
        thiT 3188414 .. 3188438 + -17.2   -4.9755   GCGTAAAAGTAACAA          TCCCCCAGCG AATTC CGCTGGGGGA          TTTTTCGTTATCTGT 100 35
GII78_RS16805 3191695 .. 3191740 + -16.5  -2.95515   ATGAAAGAAATTAAA GAAAAGATAGAAAGGGCCTGAT TTA ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTTCGCT 100 5
        gbsR 3195835 .. 3195852 + -12.7  -5.58454   AAGTAAAGCAGAAAA             CGCCTGG GAAA CCAGGCG              TTTTTTTGATGTAAC 100 35
        bslA 3196575 .. 3196592 +  -9.1   -5.2696   GCAACTAATGTAAAA             GACCGGT TAAC GCCGGTC              TTTTTTGCGTTTTAC 100 33
        ktrA NONE
        ktrB 3198957 .. 3198976 + -10.7  -5.71983   GTGATATCAAAAAAA            TCCGGCG TGCAGT CGCCGGA             TTTTTTTATGATTCG 100 37
        cdoA 3203142 .. 3203163 +  -8.8  -4.19953   AATTGACAGAAAAAA           TAAGGCTC GTAAAA GAGCCTTA            TTTTCGACTTACATC  83 281
        iolU 3206435 .. 3206462 +  -9.9   -5.4505   TCAAGCTTAAAAAAA       TCCGCACGCGCGC AAAT GC-CGCG-GCGGA        TTTTTTATTAGACAA 100 31
GII78_RS16930 3222235 .. 3222255 +  -5.3  -5.28942   AAAACAAAGGATGAG            GCGCGTG TCTCTTT CCCGCGC            TTTTTATTTCGCATA  86 398
        mstX NONE
        kbfO 3228679 .. 3228706 +  -9.2  -3.25169   ATGATCGTATTCCCA        GCCGC-CGTTTAT CAC ATAACCGAGCGGC        TTCATCACTTGTTCC  70 331
GII78_RS17005 3233677 .. 3233700 +   -11  -5.22794   TGCATGAAATCAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTTCATGCTTAT 100 68
GII78_RS17025 3236942 .. 3236956 +  -7.1  -5.41143   TATCAATTAAAAAAA               CCGGT GCTGA ACCGG               TTTTTTTAAGGCGTG  95 31
        patB 3238487 .. 3238514 +  -7.8  -3.71848   AATATAGCTGTTAAA        CGCCTTTACG TCTTCATT TGTAAAGGCG         TTCTTAATAAAGGAA  72 40
        kinB NONE
        kapB 3240318 .. 3240339 +  -6.6  -5.08824   TTTAACCGGCCATAA           CCCAGTCT GACAAA AGATTGGG            TTTTTTACGTCGCGC  86 26
GII78_RS17060 3242367 .. 3242377 +  -3.2  -2.66593   TTCCGAGAAAAAACT                 GAGG AAT CTTC                 TAAATTTAACCTTCT  43 41
GII78_RS17065 3244300 .. 3244311 +  -3.6  -3.62597   CATCTGGAAAGGAAC                GCTG CAAG CGGC                 TTATTAAAGGATCGG  52 7
GII78_RS17070 3244790 .. 3244829 + -22.6  -3.08073   GCCATCACAGATTGT  TGACAAAATCCTAAAACG GCTT CGTTTTAGGATTTTGTCA   TCTATTCAGCGTGAT 100 63
        maeL NONE
        maeM 3247998 .. 3248022 + -12.9  -5.02502   TATCTATAAGAAAAA          CGCACTGCTTG CTT TGAGCAGTGCG          TTTTTCTGTCATATC 100 32
        nupN 3249554 .. 3249580 +  -8.1  -4.82111   TGAATAAGAATCGCA         GGGATAAGG AGGTCGAGC CCTTATCCC         TTGTTTTTCTTTTAT  95 34
        nupO NONE
        nupP NONE
        nupQ 3253161 .. 3253185 +  -6.4  -5.67063   AAGATAAAACATTCT          CCCCTGGGAA GACGA TTCTCAGGGA          TTTTTTTCTAATCCA  93 34
        maeN 3254661 .. 3254683 +  -9.9  -6.08342   CTTCATAAACAGAAA           GAGTTCCGT TTTAT GCGGAACTC           TTTTTTTATTTATTC 100 33
GII78_RS17120 NONE
GII78_RS17125 NONE
GII78_RS17130 NONE
GII78_RS17135 NONE
GII78_RS17140 NONE
GII78_RS17145 NONE
GII78_RS17150 3260912 .. 3260937 +  -7.6  -6.08342   ATTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG 100 33
GII78_RS17185 3266172 .. 3266195 +  -4.5  -4.40173   ACAAACACCGAAAAA          GACCGCAAC GCTAAA GTTGTGGCC           TTTTCGCTTTGTCAT  66 44
GII78_RS17190 3267061 .. 3267074 +  -3.9  -4.42386   CAGCATAATGGCCTG               TTGAA TGCT TTCAA                TTTTCTGGCTCAAAC  64 451
GII78_RS17230 3272796 .. 3272818 +  -2.7  -4.72272   CGCTTAACTGAAAAA          TAGGACGTCC CGGT GTACG-CCTA           TTTTTCATGCGCAAG  65 23
        adeR 3286775 .. 3286804 + -16.7  -6.17669   TATCAAACTTCGGCA       CATGGATTTGTGA AATT TCACAAATCCATG        TTTTTTTATTTTCTT 100 13
         ald 3288037 .. 3288060 + -11.8  -6.04324   CTTAATTCACAATGA          GCTTGCAGAA AGAT TTCTGCAGGC           TTTTTTATTTTTTAA 100 36
GII78_RS17290 3288826 .. 3288846 + -11.2  -4.74801   CGTAAGATAGAAAAA            GAGACTGC GGCGA GCAGTCTC            TTTTTGATACGATTA 100 36
GII78_RS17335 3303477 .. 3303498 +   -13   -4.8048   ATCATAACGAGAAAA           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 67
GII78_RS17350 3307123 .. 3307144 + -11.5  -5.00196   TTCATGTAAAAAAAA           CGCTCCTGC TTTC GCTGGAGCG            TTTTATTCTTTCACA 100 32
GII78_RS17375 3311155 .. 3311180 + -12.7  -5.63517   AATAAATAAAAAAAA         GGAGCTTGTGTC TGC GACACA-GCTCC         TTTTTTATTTGAAGA 100 32
        guaC 3312596 .. 3312628 + -18.6  -4.51699   TTAATCATAAAAAAA     CGCCAAGTC-AGCGG TTCT CCGCTTGACTTGGCG      TTTTCTGCTACTTCT 100 37
GII78_RS17420 3318512 .. 3318530 +   -11  -4.60797   AATGATAGAGAAGAA             CCGCTGAT CAA GTCAGCGG             TTTTCTGTATACCCA  95 39
GII78_RS17430 3319293 .. 3319319 + -12.3   -5.7946   TCTTTTAATAAAGCA         GCCAGGCGGAT ATTTG ATCAGCCTGGC         TTTTTTTATTAGAGA 100 33
GII78_RS17460 3326568 .. 3326588 + -12.5  -5.08169   CGGCATACAGAATAA            GGGCACCCT TTT AGGGCGCCC            TTTTTTCAAATGTAT 100 26
GII78_RS17480 3328863 .. 3328879 + -12.3  -4.22338   TAGGAATGACAAAAA              CGCCAGA TGA TCTGGCG              TTTTGGCATTATGCT  93 16
GII78_RS17490 3330993 .. 3331036 +  -6.8  -6.12458   TGAATACCAAAAAAA GAAGTAACAAAAGCCGCCTCT TCA ACAGGCGGCTTAT-TTGCTGC TTTTTTCTTTTTTTG 100 19
        pucR 3338947 .. 3338960 +  -2.4  -2.64472   CATTTTATTACAAAA               CGAA TCATTT TTCG                TCACTTTCAGCAATC  40 50
        pucJ NONE
        pucK NONE
        pucL NONE
        uraH 3343560 .. 3343584 + -11.4   -3.4149   GGGGGAGTTAAGAAG          GAAGCCCGCC TCACC GGCGGTCTTC          TATTTGCACTTCAAT  85 30
        yuzJ 3344150 .. 3344176 + -14.6  -3.89956   CCTCCCTGTCCGACA         GACGCCATAAGA AGT TTTTATGGCGTC         TTTGCTATGTGCTCA 100 74
GII78_RS17600 3353525 .. 3353546 + -14.5  -4.91109   TGGCCGTAAGAAAAA           GGTGCTCCT TTTG AGGAGCACC            TTTTTCTAATACACA 100 32
        frlR 3355770 .. 3355780 +  -3.2  -3.17443   TATAAAAGAATCTCC                 CGCT CCA AGTG                 TATCTATTATATCAG  46 230
        sspG NONE
GII78_RS17655 3363030 .. 3363050 + -10.4  -5.20333   AAGAAGAGTAAAAAA           CCGC-GGCC CCTC GGCCAGCGG            TTTTTCTTCTGCATA 100 30
GII78_RS17755 3381312 .. 3381332 + -10.4  -3.99805   TGGAACAATCATAAT            GCAGCTGC TTCCC GCGGCTGC            TTTCACTTTTTCAAA  88 27
GII78_RS17765 NONE
GII78_RS17770 3382944 .. 3382972 +  -5.4  -5.71712   CAACATTAGTAAAAA       GGATACGATGTTC TTTC GGGCATC-TATCC        TTTTTTTGTGTAAAA  88 41
GII78_RS17775 NONE
GII78_RS17780 3385184 .. 3385207 +   -16   -5.4833   CCCATTAATAGAGCA          CCCCGCGGGT ATCA ATCCGCGGGG           TTTTTTATTCAATCA 100 33
GII78_RS17795 3387362 .. 3387387 +  -7.6  -4.77216   CTGAATCACAAAAAA         GCAGTCTGCT ATAATG AACAGACTGC          TTTTTGGCTATTGTT  88 12
GII78_RS17820 3392074 .. 3392098 +  -8.1  -3.55551   AGCTATTCAAATAAC          CTGAATTATAA TAA TTATAATTTAG          TATTGATTTTTATTT  72 27
        mrgA 3392629 .. 3392651 + -13.5  -5.89659   CTTAGGATAAAAAAA           GCTGAACCC TATTT GGGTTCAGC           TTTTTGTTTTTTTCT 100 31
        cssR NONE
        cssS 3396347 .. 3396371 +  -8.7  -5.71712   ATAGCAGTGCCAAAA          TAGACTGTAGA TGT TTTGCAGTCTA          TTTTTTTATGTGAAA 100 23
GII78_RS17850 3397587 .. 3397613 + -19.6  -4.68511   GCAACATATTTAGAA         GAACGGCTGCTT AAA AAGCAGCCGTTC         TTTCTTTCTATTACG 100 28
       gerAA NONE
       gerAB NONE
       gerAC 3403305 .. 3403336 +    -5  -4.28049   GGCTCTCCCTTGCTT      GCGGCGCGGATGGC ATCG GCGATTTCTGCCGC       TTTTGAGGTTTTCAA  65 316
GII78_RS17935 3414236 .. 3414256 + -12.6  -5.96219   GTAGTATAAAAAAAA            CGCATCCG TGTTT CGGATGCG            TTTTTTTTATACGTC 100 37
GII78_RS17965 NONE
        oxdC 3420231 .. 3420262 + -15.2  -3.14564   AAATAAAAGACTTGC      GGCTTGCAGAGAGC ACTC GTTCTCCGCAAGCC       TTCATAAGGAGCTGA 100 35
        rsiO 3420698 .. 3420722 + -10.8   -5.1356   TCCCAGCTAAAAAAA          GAACGCATTC CAATT GGATGCGTTC          TTTTTATTCATAGCG 100 31
GII78_RS18010 3428017 .. 3428054 + -15.8  -3.85698   GAAAGCTTGACTAAA   TAAACAAAAGAGCCGC CTGCCC GCGGCTCTTTTGCTTA    TTTATAAGGAACGGC 100 23
GII78_RS18025 3430835 .. 3430846 +  -4.4  -4.11692   TTTTATATGCTGTTT                CATG GGCG CATG                 TTTTAAACGTGAGTG  61 8
GII78_RS18030 3432811 .. 3432828 +  -9.9  -5.22039   TTCCGAATAAAAAAA             TCCCTCT ATCA AGAGGGA              TTTTTTACGTTTCCA 100 31
        modA NONE
        modB 3435322 .. 3435338 + -13.7  -5.26875   AACGCACTAAAAAAA              CTCCCCG TAA CGGGGAG              TTTTTTGATTAAAAC 100 31
        yvgO 3436896 .. 3436915 + -10.7  -5.19261   CTTAATATAAAAAAA            GCTGGCG CTCTAA CGCCAGC             TTTTTTGCTGCATTT 100 36
GII78_RS18080 3446309 .. 3446345 + -20.5   -4.3014   CCCGGCAGGCTACCA    TAAAAGAAACCTCTCCG TCA TGGAGAGGTTTCTTTTA    TTTTACTGACTATCT 100 90
        iolW 3454912 .. 3454933 +   -13  -4.87291   AGCACTAAAACAAAA           GCCTCCCC AAATAA GGGGAGGC            TTTTTCATTAGAATG 100 33
GII78_RS18180 3465750 .. 3465766 +  -3.5  -5.59655   CATAGGAATAGAAAA              CGCTTGG CTT CCTTGCG              TTTTTTGTTACTTTA  79 36
        rghR NONE
GII78_RS18195 NONE
        catR 3467448 .. 3467479 +  -5.1  -6.04324   GACTAATTGCTAAAA      CGGTTCTGATCTC AAAGAC GAGAAAAGAGCCG       TTTTTTATTTTTTCC  95 35
GII78_RS18205 3469268 .. 3469303 + -17.2  -3.49653   AGTTTACGATTTAAA    TAGAAAAAAGAGGCTGG ACT CCAGCCTCTTTTT-CTA    TTCTATGCAGCTGAT 100 27
GII78_RS18230 3473572 .. 3473591 +  -7.8  -5.55769   CGAAGCCGTAAAAAA            CGCCCTGT CATT ACAAGGCG             TTTTTTCTTATGCGG 100 30
        opcR 3477845 .. 3477870 + -13.4  -5.00895   CGAAAACAAAAGAAA         GCAGCTCTCT AAAATA AGAGAGCTGC          TTTTTGTATCATGAG 100 9
GII78_RS18265 3479353 .. 3479365 +  -3.5  -2.56477   TTTACAACTTTTTTC                TTTTA TAA TAAAA                CTATTAGTCTATTTT  43 100
GII78_RS18270 3480107 .. 3480146 +   -21  -3.06831   GTTATATGCTCTTTT  AAAAACAACCCCATCACC TGCT GGTGATGGGGTTGTTTTA   TTGAATAGACGTTAA 100 24
GII78_RS18280 3482562 .. 3482584 + -10.5  -4.21997   GAAAGCATAAAAAAG           CCGCCGAGA GAAAA TCCCGGCGG           TCTTTTTATTACTTG  90 39
        araR 3492802 .. 3492830 +    -9  -5.73339   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTATAGTTGT 100 31
GII78_RS18330 3494601 .. 3494622 +  -6.5  -5.23765   TCGATAAATTATTAA           GCTGTCAGG TAAA CTCGACAGC            TTTTTATATTATTTA  86 34
GII78_RS18340 3496647 .. 3496672 + -19.1  -4.60258   GCACAATAATAAAAA         CCCTCTTGCCG GATG CGGCAAGAGGG          TTTCTTATTTACTGA 100 32
        rsbQ 3507141 .. 3507152 +  -5.8  -3.05384   GGAACGAAAGGGATA                GAGG TGAC CCTC                 TTAGATGGACAAACA  56 45
        rsbP 3508374 .. 3508411 + -11.5  -5.95539   TGTAAAATAAAATGA   TCCATGAGACATAACAA TGAT TTGTTACATCTCATGGA    TTTTTTTGTTTCAGC 100 31
GII78_RS18435 3519249 .. 3519267 + -10.3  -5.05113   GATTCCTTAAAAAAA             TCCTCCC GTCTA GGGAGGA             TTTTATTTATATCGC 100 31
GII78_RS18445 3520879 .. 3520905 + -11.7  -4.62203   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG  95 27
        slrR NONE
        pnbA NONE
GII78_RS18535 3539052 .. 3539083 + -20.4  -5.28414   TCAGCAAAAAGAAAA      CCCGGAAAAGAGAA GTAA TTCTCTTTTCCGGG       TTTTTATGTTTATTA 100 8
        sacB 3544210 .. 3544248 + -14.2  -4.31433   TAACAAATAAAAACG   CAAAAGAAAATGCCGATA TCC TATTGGCATTTTCTTTTA   TTTCTTATCAACATA 100 31
        levB 3545832 .. 3545855 +   -16   -5.7946   ATTCATGAATAAAAA          CAGGGGCGGC GCAG GCTGCCCCTG           TTTTTTTATTAGGAG 100 29
GII78_RS18570 NONE
GII78_RS18575 NONE
GII78_RS18580 NONE
GII78_RS18585 3549108 .. 3549133 + -11.9  -4.46212   ATTGCCCCATCATTT         TGCTGCATGTC ACAA GACCTGCAGCA          TTTTCTGCTGCCGCG 100 219
        cotR 3552732 .. 3552746 +  -7.1  -3.29511   CAACTGAGCTACGAG               CGCAG AATGA CTGCG               TTATGAGAACGTCAG  63 382
        clpP 3553606 .. 3553631 + -13.4  -5.72207   AAAGTAATAACACAA         CCTGCAAGAG CTGCGT CTCTTGCAGG          TTTTTTTCATTTCAA 100 34
GII78_RS18665 3566728 .. 3566744 + -11.5  -5.45726   AGCATGCATAAAAAA              GCGGCCG CGA TGGCCGC              TTTTTTTAACCTGTG 100 30
GII78_RS18680 3570323 .. 3570344 + -14.5  -3.93782   TCAATAAATCAAAAA           TCCGGTCTG ATAA CAGACCGGA            TTTCATATTACATAC 100 34
GII78_RS18705 3575269 .. 3575289 + -11.2  -4.19238   TGTTCATAAGAAAAA            GCTTGCAG ATAAC CTGCAAGC            TTTTCACGTTACAAA  90 32
GII78_RS18815 3597238 .. 3597248 +  -3.2  -4.98255   AATTATCTTTACTTT                 CAGG CTG TCTG                 TTTTTATGATTAAAG  70 143
GII78_RS18820 3598035 .. 3598058 + -12.5   -4.7889   ATTTTAACCAAAAAA          GTCCGCTGA TGTTAT TCAGCGGAC           TTTTTCAATCTTTCT 100 34
        nagA NONE
        nagB NONE
        nagR 3604844 .. 3604854 +  -3.2  -4.26398   ACTGGTCTGGTGCTG                 GACG ATA TGTC                 TCTTTTTTCGTCTTG  60 91
GII78_RS18870 3609313 .. 3609334 + -10.1  -2.82407   ATATATGTAAAAAGA           GTCTCACCC GCAT GGGAGAGAC            CTTTGGAATTCTATT  75 31
        pchR NONE
GII78_RS18890 3613499 .. 3613516 +  -9.1  -6.32976   ACCACATGTAAAAAA             GCTGCCT TTGC GGGCAGC              TTTTTTTATTTTTTT 100 30
GII78_RS18915 3616050 .. 3616068 +  -5.4  -2.75891   CAATATCTTGCCTTT             TTTGTTTT GAA AAAACAAG             TGATTCCCTGGCTGT  52 94
GII78_RS18940 3625583 .. 3625605 +  -3.4  -2.64416   CGTCCCCCTCTTTCT           TATACAAGCG GGG CGGGTGTATA           CTTGTCCTGCCAGTA  43 43
GII78_RS18945 NONE
GII78_RS18950 3627581 .. 3627620 + -12.1  -4.46212   CTCAGCGTAACGCAA  AACAGCTCGGCATCGCA TCTTCC TGCGGTGCCGGGCTGCC   TTTTATGATCCAGAA 100 31
GII78_RS19105 NONE
        tagV 3655770 .. 3655796 + -17.4  -4.56597   CATCCTATTAAAAAA         TGCCCGGTCCTT TTA AAGGATCGGGCA         TTTTTGCGCAGAAAA 100 30
        lytR 3673681 .. 3673707 + -13.8  -5.65927   AAAGTAAAACAAAAA         GAAGCTTCGCAC AAT GTGCAAAGCTTC         TTTTTTATTTGCCTG 100 34
        galU 3681012 .. 3681037 +   -12  -5.95539   AAATCTAAACAAAAA         GGCTATTGGA CATTCA TCCAATAGCC          TTTTTTTATTTCAAC 100 33
GII78_RS19250 3693623 .. 3693646 +  -3.1  -3.09018   TGAATCTTTCACTGT          GCCTGCCGAC AATCA GT-GGCAGCC          GTTTTGAGCTGATGA  45 78
GII78_RS19255 3694814 .. 3694840 +  -6.7   -3.0497   AAATGAGAAATTAAA         CTGATCTTTAT ATATA ATAGAGATCGG         TATTGCAAATAATAT  60 22
GII78_RS19260 NONE
GII78_RS19265 NONE
GII78_RS19270 NONE
GII78_RS19275 3699701 .. 3699724 +   -14  -6.13503   AAGATAAATCAAAAA          CACCTTTTGC AGCC GCAAAAGGTG           TTTTTTTTATTGATA 100 34
GII78_RS19290 NONE
GII78_RS19295 NONE
GII78_RS19300 3707417 .. 3707438 +  -8.7  -6.10295   ATAAACCGCTGAAAA           GGGTGCG CCTAATTA CGCACCC            TTTTTTTTATGTTCC 100 37
        tagT 3710124 .. 3710147 + -18.2  -4.32903   TAGGTGTATAATGAA          CGGGATGGCG ATTA CGCCATCCCG           TTTTACATATTTCCT 100 30
GII78_RS19315 3711142 .. 3711160 +  -9.6  -5.62288   TATGCATAAAGAAAA             GACTCCAG AGA TTGGAGTC             TTTTTCTTTTATTGC 100 32
GII78_RS19345 NONE
        rbsK NONE
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB NONE
GII78_RS19375 3722594 .. 3722629 + -17.8  -3.46205   ACATGACAAAATAAC    TGAGAGGGATTCCGCA TTTA TGCGGAATCCCTTTTA     TTATGAATTGATTTG 100 27
GII78_RS19380 3723050 .. 3723081 + -11.7  -4.07568   GGATTTTTAAACAAA      TACAGCCCTG-CCG TATGT TGGACAGGGCTGTA      TTTTAAACAAAAGGC  91 31
        alsR 3727306 .. 3727330 +  -2.2  -2.86023   AACTAAAGAGAGTGA          TGCAGGTA CATGAACAA TACTTGCA          ATCTCTTTTTTCTTT  41 13
GII78_RS19405 3728877 .. 3728902 +  -6.9  -4.54047   GTATGAAACGAAAAA         CTGCCTTCT GCTTTTCA AGAGGGCAG          TTTTGTATACACTAG  81 45
        cotG 3732759 .. 3732787 +    -6  -5.95539   TTTTCATTGTTTCAA       TAGGCTGCCG-GC GGAG GTACGGAAGCCTA        TTTTTTTATTTGCCC  93 47
GII78_RS19430 3733621 .. 3733648 + -14.2  -4.39002   AAAATATCAAAAAAA        GAACACCCAGAG TAAG CTCGGGGTGTTC         TTTTATGAAACGTTT 100 118
GII78_RS19435 3734346 .. 3734362 +  -5.8  -3.50393   GCCGTCTGAGTCTGC             GGCTGGC CTTC GCC-GCC              TTGTGTGCCGTACAG  57 331
        chrS NONE
        chrB NONE
        chrA 3737459 .. 3737474 +    -9   -4.8743   CATTTATAGAAAAAA              GCACCT TGAC AGGTGC               TTTATTTATTTTGGC 100 32
GII78_RS19470 3739551 .. 3739566 +    -9  -2.79823   CCGTCAATGAGAATA              TCGGTG TATG CACCGA               CTTCATTTTCAGGCA  66 329
GII78_RS19550 NONE
GII78_RS19555 3755375 .. 3755395 + -15.5  -5.17576   ATCATGACTAAAAAA            GCTGGCTCT GAT AGAGCCAGC            TTTTTTCCGTTCATA 100 40
GII78_RS19580 3758821 .. 3758851 + -15.6  -4.39386   ATATGTTCTGCATGA       AAAAAGCTGCCGTT TTG AACGGCAGCTTTTC       TTTTCGTGCTTTCAC 100 109
        rapD 3762952 .. 3762962 +  -2.4  -3.59979   CGTTCTCATCAAGTA                 CGGG ATA CCCA                 TTTCCAGTGACGAGC  49 428
GII78_RS19640 NONE
GII78_RS19645 3767820 .. 3767843 + -18.2   -5.1287   CAGAATAACTTGTCA          GACTGCCGGG AAAT CCCGGCAGTC           TTTTTTGCATATAAA 100 33
         amt NONE
GII78_RS19680 3775500 .. 3775522 + -12.8  -5.93809   CTTTAATATCGGTAC           GAGATTCGGA CAC TCCGGATCTC           TTTTTTTTGTGCACA 100 35
GII78_RS19685 3776266 .. 3776293 + -12.1  -4.05181   CTAAGAAAGACAAAA        GCCGGC-GTCTT TAACC AAGACAGCCGGC        TTTAATATTTCTCAT  93 37
GII78_RS19700 NONE
GII78_RS19705 3778844 .. 3778874 +  -9.1  -4.07285   GATGAGACAGGACAG      GGCATGCGTTCCAT ATAA ACGGAAC-CATGCC       TATTTTATTTGACTA  81 42
GII78_RS19710 3779247 .. 3779271 +  -2.2  -5.25805   TCGCTCTTTTTGATC         CTGTTCAGCAT ATAG ATG-TGAACCG          TTTTTTGGATTTGTT  74 155
         cls 3781249 .. 3781271 + -11.9  -4.32034   TATAAGATGCGAAAA           CCCCCAGCC TTTAC GGCCGGGGG           TTTTCCTGATGGTCA  93 36
GII78_RS19730 3782570 .. 3782587 + -12.7  -5.64873   TATTAATGAGAAAAA             CCCGGAG CTGG CTCCGGG              TTTTTTATTATTCCG 100 35
GII78_RS19835 3798190 .. 3798210 +  -9.8  -5.72254   GCGTTCATAAAAAAA            TCCTTCTC TTTAT GAGAAGGA            TTTTTTCTTATTTCC 100 31
GII78_RS19930 3812993 .. 3813011 + -13.2   -5.4505   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTTATTAAAACA 100 16
GII78_RS19950 NONE
        racA 3816501 .. 3816518 +  -8.4  -6.09888   AACCTAAAGCAAAAA             GCTCCC CGTAAA GGGAGC              TTTTTTTTGTTACGC 100 34
GII78_RS20015 3827807 .. 3827836 +  -5.8  -5.57396   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAAC-GGCAAGTC       TTTTTTATTACTTCT  91 70
         cls NONE
        uvsE NONE
GII78_RS20050 3836345 .. 3836364 + -10.8   -5.2291   CTTACATACAAAAAA            GGATAGAC ATCT GTCTATCC             TTTTTCTTATGCTCT 100 41
GII78_RS20100 3848655 .. 3848674 + -10.8  -5.47821   CACAAGGTAAAAAAA            CAAGGACA CCGC TGTCCTTG             TTTTTTTCAGTCAAT 100 31
GII78_RS20125 NONE
        sboX NONE
        albA NONE
        albB NONE
GII78_RS20145 NONE
        albD NONE
GII78_RS20155 NONE
GII78_RS20160 NONE
        albG 3860600 .. 3860612 +  -6.3  -3.86897   CTGGGAAATTCAAAT                GTATC TAT GATAC                TTTCTACCAACTGCC  66 461
        rapF NONE
        phrF 3864425 .. 3864444 +  -8.6  -6.36459   ATGATTTAATGAATA            CAACCGGT TTTC ATCGGTTG             TTTTTTTTTGTTAAA 100 32
GII78_RS20195 3865173 .. 3865201 + -14.8  -4.62069   CTTTCTCAAAACAAA        GCGATCTTACAT TAAAC ATGTAAGATCGC        TTTTTAAGGTAAAAA 100 44
GII78_RS20200 NONE
GII78_RS20205 NONE
GII78_RS20210 NONE
GII78_RS20215 NONE
GII78_RS20220 3868774 .. 3868796 + -14.2   -5.4505   TTAAAAGATAAAAAA           GGGCCTGGAT GTA ATTCAGGCCC           TTTTTTATTAAAAAC 100 37
GII78_RS20235 3872855 .. 3872881 +   -13  -3.33762   CGACATCATTGAAAA         TAACCCGGCTCC TCG GAGGCCGGGTTA         TTCGTATGGTTCCTT  93 29
GII78_RS20250 3874643 .. 3874663 +  -9.6  -4.79955   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTATTATCCCTAT 100 36
        rsfA 3883177 .. 3883202 + -12.7  -4.13014   AATGACATAGAAAAA         TCCCAAAACGG GCAG CTGTTTTGGGA          TTTTCGCCATGTGCA  95 36
GII78_RS20320 3888322 .. 3888343 +   -13  -4.78752   TATGTATAATATCCC           CTCCCGCC CTATCC GGCGGGAG            TTTTTCAATTCTCCT 100 32
        bacG 3889231 .. 3889252 + -14.5  -4.35483   AAAAGCATATAAAAA           CATCCCGCT TTTT AGCGGGATG            TTTCTTGTAATGACC 100 29
        gerQ 3914949 .. 3914976 + -12.2  -5.72622   CAAGATAAGAAAAAA        GCCAATCACTCAT ATG ATGAG-GATTGGC        TTTTTTGTTTATAGA 100 33
GII78_RS20465 3918620 .. 3918636 +  -9.4  -4.60889   TACTCAAATAAAAAA              GCGCAG ATCAC CTGCGC              TTTTTACAAATCCTT  91 30
GII78_RS20495 3922741 .. 3922765 + -13.6  -4.65895   AATCATAAACAAAAG          GGGCTGCCTT ACAGA GAGGCAGCCC          TTTTTAAATCACCGA 100 33
GII78_RS20515 3927527 .. 3927545 +  -8.8  -3.00046   CTCTTTTACATGTCC             GATCGCCC ACA GGCCGATC             TCATATTCTTTTTTA  66 493
         vpr 3931227 .. 3931247 + -18.3  -4.60041   GTTGAATAAGAAAAA            GCCCTGCCG AAT CGGCAGGGC            TTTTTAAAGATCAGT 100 32
        ywcE 3935243 .. 3935262 + -12.2   -5.2015   GAAGACAGCAAAAAA            CCCTCTTC CAAT GAAGAGGG             TTTTTGTATTATTCG 100 39
GII78_RS20575 3939988 .. 3940013 + -15.5  -4.67048   GGATAAAAGCAGCAG         CACCCGAAGCG TCAG CGCTTTGGGTG          TTTGTTTTGCCATAA 100 35
        slrA 3944569 .. 3944583 +  -8.6  -3.03243   CTACGACAGACAGCC               GGTGAT GCG ATCACC               TCTTGGCACATGCAT  70 162
GII78_RS20605 3945175 .. 3945192 +  -4.1  -4.02946   GATCTGAAGGGTGAA             CAGACAT GAAT ATGACTG              CTTTTTTATTATTTT  58 17
GII78_RS20610 3946727 .. 3946744 +    -7  -5.00412   ACAGGAATAAAAAAA             GCTCTC TTTATC GAGAGC              TTTTTCCTTGTCTTT  85 31
GII78_RS20650 NONE
GII78_RS20655 3955021 .. 3955038 +  -7.7  -5.75478   CATTTATGTAAAAAA             CTGTCCT CTCG AGGGCAG              TTTTTTTATGTGCTT 100 30
GII78_RS20660 NONE
GII78_RS20665 3956559 .. 3956579 +  -9.7  -5.10004   TCTACATAAAAAAAA            GCTGCCC CTGAACA GGGCAGC            TTTTTCATTATTTTT 100 32
        glxA 3958273 .. 3958307 + -16.1   -3.5774   GAGTTCTTTCAGCGG     TAATAAAAAAGCAGC ATAAC GCTGCTTTTTTATTA     TTTAAACACTTACAT 100 23
         epr 3961830 .. 3961860 + -13.5   -5.1925   AAAGTAACCAAAAAA       CCTTTAAGACTTG CATTC CAGGTCTTAAAGG       TTTTTTACATTCTAA 100 34
        sacX 3963623 .. 3963640 +  -2.8  -3.26844   TTTAAAGAAGAGACA             GAATAA CTGGAT TTATTC              GTTTTCATTCATAAA  45 20
GII78_RS20695 3964538 .. 3964560 + -10.7  -5.77988   GAGACAAACAAAAAA           CGCTTTTGA TCATC TCAAAAGCG           TTTTTTTATATCTGT 100 39
        ywaE 3967120 .. 3967147 +  -9.9  -5.59879   GGTACCGCGTGCATT        GAGCCACGTCCC TTATC GGGATG-GGCTC        TTTTTTGTGTTTGTA 100 219
GII78_RS20715 3968434 .. 3968459 +  -7.7  -5.42862   TTTGATATTCCGAAA         CGCTTATGA CCCTTCAT TCATAAGCG          TTTTTTTGCAGGTAT 100 41
        ywaD 3969947 .. 3969966 + -13.6   -5.9873   TATCAAATAAAAAAA            GACGGCAC TTGG GTGCCGTC             TTTTTTTTATAATGA 100 31
        dltX NONE
        dltA NONE
        dltB NONE
        dltC NONE
        dltD NONE
GII78_RS20780 3979896 .. 3979918 + -12.1  -5.22312   CGAGCATATGAACAC           GCAGGAGAA TTAAT TTCTCCTGC           TTTTTTCATATGAAT 100 13
GII78_RS20785 3981148 .. 3981168 + -11.1  -5.47399   GCAAATAAGAAAAAA            GCCGGCC CATTACA GGCCGGC            TTTTTTTACGCTTCA 100 33
GII78_RS20825 3989309 .. 3989330 + -10.9  -6.23317   ATTAACAAAAGCGAA           CAGGGCTTT TTTT GAAGCCCTG            TTTTTTTATTTTTCT 100 36
GII78_RS20865 3995076 .. 3995098 + -12.1  -5.37345   GGGGTATCAAGAAAA           GCTGTCTTC TCTCT GAAGACAGC           TTTTTTATCATTCAA 100 10
        cimH 4003772 .. 4003801 + -10.9   -5.1287   TATTGATCCCCGCAA       GCAAGTTC-TTCGT CAA ACGAAAGAGCTTGC       TTTTTTGCATGTCCA 100 35
GII78_RS20900 NONE
GII78_RS20905 4005816 .. 4005835 + -12.1  -6.01187   TGTGGCGGCGGAGGG            GGCGGCG ATTAAA CGCCGCC             TTTTTTTATTTCATT 100 14
GII78_RS20925 4010549 .. 4010573 +  -7.2   -5.5454   TTCTAAATGAAAAAA          TCCCTCTG CTTCAAGTA CAGAGGGA          TTTTTCTTTATTTAG 100 35
GII78_RS20935 4012535 .. 4012560 + -17.7  -3.91488   TCAAATAACAGCTAA         CAAGGGTGCCT GTTC AGGCACCCTTG          TTCTTTAAAGGCCTT 100 33
GII78_RS20950 4015255 .. 4015270 +    -4  -2.85286   ATAGCAGCTGAAAAA              TCAATC TGCC GGTTGA               CGTTTTTCTTTCCCT  46 37
GII78_RS20955 NONE
        yxjM NONE
        yxjL NONE
        pepT 4018967 .. 4018988 + -11.6  -5.36441   AGCATAACGCCAAAA           GCCAGTCC AAAAAA GGACTGGC            TTTTTTGTGTGAAAA 100 34
GII78_RS20975 4019764 .. 4019783 +  -8.6  -4.26634   TATTTCAAACGAAAA            GGCTGC-TG AAT CACGCAGCC            TTTTAAAATTGTTTT  83 46
GII78_RS20980 4020551 .. 4020575 +   -13  -4.68593   GATTTGATCGTTCAA          GCTCTTCCTT ACACA AAGGAAGAGC          TTTTTACATGCTCAA 100 216
GII78_RS20985 4021940 .. 4021964 +   -13  -5.56264   GAGATTGTCACGCAA          GCTCTTCCTT ATCCA AAGGAAGAGC          TTTTTTATATTTGAA 100 217
GII78_RS20990 4023151 .. 4023180 +    -8  -5.42131   AAGCAAAGAAAAAAA       CACACTTGATTCC CTAGC GGAG-CAAGTGTG       TTTTTTATGTCATTG  95 39
GII78_RS21020 4029598 .. 4029625 + -14.3   -4.5774   TGTGGTAGAAACATT        GAGCCATATCC CTTTTC GGATATGGCTC         TTTTCATTATTGATA 100 33
        citN 4034446 .. 4034470 + -11.5  -3.76815   TCATTACAATCATAA          GAGCCTGCT ATATTGC AGCAGGCTC          TTTCACATTTTGCAT  91 142
GII78_RS21060 4038596 .. 4038625 + -10.1  -3.68979   CAGCCAGCAGCAAAA       TGACCTGC-CCC TTTAACT GGGAGCAGGTCA       TTCATTATTTATTCG  84 10
        hutP 4056904 .. 4056942 + -11.9  -4.96848   GATCTTAGACGATAG  GGGGCTATGC-GTGAAAA CGAA TGTTCACAGCATAGCTCC   TTTTTGTATGGGCGC 100 52
        hutH NONE
        hutU NONE
        hutI NONE
GII78_RS21195 NONE
GII78_RS21200 4063909 .. 4063943 +    -5  -5.60689   ACATCCTATAATTAA     AAAAGCACACCCCG CTCAGCA TGGGATGTGCTTTA     TTTTTTATTCTGTAA  88 30
       cotNE 4081076 .. 4081091 +  -2.6  -4.78077   GGAAAATAATTGTAG              TTCC-TC TTT GACGGAA              TTTCTTTTCATTCAA  65 191
GII78_RS21300 4081521 .. 4081545 + -10.1  -5.85737   AGTAACATATAAAAA          GCTCAACAC AATGCGA GTGTTGAGC          TTTTTTTCTTACTGT 100 36
GII78_RS21310 4083101 .. 4083124 + -10.3  -5.37345   TAAAAAATAAAAAAA          CGGCACAGT CATGAC GCTGTGCCG           TTTTTTATGATTCAC 100 31
        iolR NONE
GII78_RS21395 4101496 .. 4101520 + -18.7    -5.626   CGCATAAGAAGAAAA          CAGCCTTCTCC ATT GGAGAAGGCTG          TTTTTTTGTGCGATA 100 34
GII78_RS21400 NONE
GII78_RS21405 4102729 .. 4102749 +  -7.6   -5.5943   ATGTCTTAATCAAAA            CCTTACTC CGCGC GGGTAAGG            TTTTTTTAATGGTTT 100 43
GII78_RS21410 4104341 .. 4104367 + -13.1  -5.19879   ACTTTATAAAAAAAA         GGAATCGTCTC CTTAT GGGACGATTCC         TTTTTCTGTTTACAC 100 32
GII78_RS21425 4107615 .. 4107633 +   -11  -5.19879   AAAGAAACGAGATAA             GAGAGGGG ATG TCCCTCTC             TTTTTGTCTTTCAAA 100 26
GII78_RS21435 4110279 .. 4110302 +  -7.5  -5.90231   TAATCATAATGAAGA          GAATCTGCA TCATCT TGCAGGTTC           TTTTTTTATCTTTAT 100 38
GII78_RS21455 4113437 .. 4113472 +   -12  -4.88918   TGTATAAATAATAGA    AAAAAGTCTAGACGCC AATA GGCATCTAGACTTTTG     TTTTCTTTACAATAG 100 30
GII78_RS21475 4117683 .. 4117708 +  -3.4  -4.66953   ACCATGATAGAAAAA        CCCATGCTGTTC CAGC GAAC--CATGGG         TTTTTCAGCTGTTAA  64 47
GII78_RS21485 NONE
GII78_RS21490 4119453 .. 4119475 + -10.6  -4.98531   TATTTAACAAAGAAA           GACTGCCC CGGGGGA GGGCAGTC           TTTTTCGTTTAAGAA 100 34
        gntR NONE
        gntK 4124237 .. 4124250 +  -6.7  -2.54687   TGACATGAAGGGGAG               GGCAT TACC ATGCC                GTTAATCATCGTTGC  57 45
        gntP NONE
         gnd 4127035 .. 4127059 +  -9.4   -5.9218   AACCTGTATCAAAAA         CACGG-TCAGT TTCA ACTGAACCGTG          TTTTTTTCTTCTATC 100 39
        ahpC NONE
        ahpF 4129598 .. 4129638 + -22.1  -5.46657   CCGTAACTAATATAA  GAAAGCCGCAATATTGCCA GAT TGGCAGCATTGCGGCTTTC  TTTTTTATTCCAATA 100 31
GII78_RS21555 NONE
GII78_RS21560 4134360 .. 4134376 +  -6.6  -5.88197   ACTTTGAACAGGAAA              CCAGAT TTGAC ATCTGG              TTTTTTTGTGTTTCA  93 47
GII78_RS21565 4136479 .. 4136506 +  -4.1   -3.3692   GAAGTGAGGGATGTG        GGGTTCAGGGA TTATAT TCTTTGGGCCC         ATTTTTACAATCAAC  50 34
GII78_RS21575 NONE
GII78_RS21580 4142035 .. 4142056 +  -9.5   -3.8901   AGGATTTTATTAAAA           CAGGCATAT TCAA GTATGCCTG            TTTACTACTTTAAGA  83 241
GII78_RS21610 4147963 .. 4147986 + -13.2  -5.54338   ATTATCAGCAATAAA          GCCGG-CGTTC TGA GAACGTCCGGC          TTTTTCTTTTACTTC 100 27
        rapG NONE
GII78_RS21650 4153708 .. 4153747 + -15.4  -2.79004   GGGATTCAATTTAAC  GAAAGAATCCTAAAAC GGTTTGTA GTTTTAGGATTCTTTC   ATCTTTTCAGCGTGA 100 63
        rocR 4159510 .. 4159528 +  -9.5  -3.35438   ATGCGGCAAATGCTC             CGGCGCG ATGCC TGCGCCG             TTGTCCGCTATCATC  74 211
GII78_RS21685 4162671 .. 4162701 +    -9  -4.82901   TCTAAATACTCTTTT       AAACTGAACGTGCG TGA CCCGCGTTCAGTTC       TTTTTCTAAGGAGGA 100 133
GII78_RS21690 4163297 .. 4163321 + -10.7  -5.83822   ATATATCCTTTTCAA          CTGAACGGGCG TGA CCCCTGTTCAG          TTTTTTTTGCATATC 100 98
GII78_RS21765 4175019 .. 4175036 +  -9.1  -5.06103   TTTAATGAATGAAAG             CCTTCGC TGCA GCGAGGG              TTTTTTAGCGGTTAT 100 36
GII78_RS21775 NONE
GII78_RS21780 4176804 .. 4176822 +  -8.1  -5.65927   AAATTCAGCATAAAA             GCGGGGA AAATA TCTCCGC             TTTTTTCTTTGAATA 100 28
GII78_RS21785 4178958 .. 4178991 + -15.5   -3.1315   TTATCTCGTGGAATA     AAAAAGAGGCTTGGA TGAA TCCAAGCCTCTTTTC      TATTAAGCTTCTTCT 100 25
        cotF 4183393 .. 4183417 + -14.4  -3.58864   AATGAAATAAAACAA          GCAGCAAAGG AGTTC CCTTTGCTGC          TATTTCTGCTGATCC 100 31
GII78_RS21820 4184917 .. 4184974 + -22.5  -3.50047   TGTCTTAACAGACGC AATGGCTGAATAAGCAAAAAGCATCCCG CAT CGGGATGCTTTTT-CTTATTCACCCATC TTCTCAATTTGTCCC 100 13
GII78_RS21830 4187154 .. 4187175 +  -8.8  -4.90778   TTAAACTGGAATGAA           GAGTGCTT GCTGAA AAGCACTC            TTTTCTTTGAATCCG 100 27
GII78_RS21835 4188266 .. 4188296 +  -7.8  -2.60032   CAACCGGATACAAGC      CCGATA-AAGGAT TCACCC ATCCTTCTATCGG       CATTTTTAACACACC  59 242
GII78_RS21850 4190322 .. 4190338 +  -5.1  -5.23316   ATTGGAAATAAAAAA              GGACC CGCTTAT GGTCC              TTTTTTGCTGTCATC  79 30
GII78_RS21860 NONE
GII78_RS21865 4193119 .. 4193129 +    -4  -3.30443   TGTCACTTATGAGCA                 TGAA CAG TTCA                 TTGGTATACTAATCA  50 55
GII78_RS21870 4193729 .. 4193744 +  -4.6  -5.93252   CCGCAAAAGCCTCTG              CGGCAG GCAG CTGCCA               TTTTTTCTTTTTGGG  91 103
GII78_RS21885 NONE
GII78_RS21890 4196243 .. 4196264 +  -9.5  -3.53012   TCTTATCAAAAAAAA           GAAGGGGTT AAAA AACCTCTTC            TTTGAAAAAACGAAA  78 15
GII78_RS21900 NONE
GII78_RS21905 4198379 .. 4198405 + -13.1  -3.31269   TCTTATTGAACTAAA         GGGGAATCCAT AAATA ATGGGTTCCCC         TTAATATACTATGGA  95 71
GII78_RS21925 4202618 .. 4202651 +  -8.9  -5.10877   GCGATCCACACATTA     ATAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTAC      TTTTTGATTTCTTAT 100 8
GII78_RS21935 4205118 .. 4205140 + -13.5  -2.92246   ACAGATTTAAAAAAG           TCAGTGCGG ATCTG CCGCACTGA           TCTCATTACAATTGC  90 31
        yyaC 4214874 .. 4214894 +  -8.4  -4.39696   CATATAAAACAAAAA            CCATCTTT GCTTG AAAGATGG            TTTCTTCATTTACGA  86 34
GII78_RS22010 4217220 .. 4217242 + -13.5  -4.01088   TTGAAAATATAAAAA           GCTCTCCTG CTTTT CAGGAGAGC           TTCTATTTTGGTATG 100 51
        rpmH 4224579 .. 4224602 -  -8.9  -5.11033   CATAACGTGAAAAAA          GACCACTGA CATTAT TCAGTGGCC           TAAGCTGATAATACT 100 25
        rnpA 4223997 .. 4224008 -    -3  -2.75844   TCTTTTATTGCAAAG                CATA CTTG TATG                 TATTTTAGCATCTTT  42 118
        yidC NONE
GII78_RS22035 4222513 .. 4222540 - -11.4  -5.71712   TCGGATACAAAAAAA        CCGAAATCCAAT TTTT ATCGGACTTCGG         TTTTATGCTATCTTT 100 33
        mnmE NONE
        mnmG NONE
        rsmG NONE
         noc 4217220 .. 4217242 - -13.5  -5.28983   TTGAAAATATAAAAA           GCTCTCCTG CTTTT CAGGAGAGC           TTCTATTTTGGTATG 100 28
         soj NONE
       spo0J 4214874 .. 4214894 -  -8.4  -5.58522   CATATAAAACAAAAA            CCATCTTT GCTTG AAAGATGG            TTTCTTCATTTACGA 100 35
GII78_RS21990 NONE
GII78_RS21985 NONE
GII78_RS21980 4210393 .. 4210425 -  -4.9  -4.13945   AGGTTCACTGGAAAA      GACAAGCTGACAA AAAAGCA TTTTCAGCCTGCC      AATCCCTTTGATTAT  63 37
        ychF 4209150 .. 4209160 -  -2.6  -3.27476   ATGGGCAAGGAGCAA                 TAAT TCT ATTA                 CTCACAATTTTATAT  45 75
GII78_RS21970 NONE
         ssb 4208260 .. 4208274 -  -4.2  -2.69433   TAATCACATTAGAAT               GGAAGA TCA TCATCC               GAGATGTCAATCGGT  47 4
        rpsR 4207931 .. 4207956 - -16.3  -5.24129   TCCCCCTATAAAAAA         GAGCAAGAACC CGAA GGTTCTTGCTC          TTTACGCATCAGCTT 100 39
         xth 4207116 .. 4207140 -  -5.8  -5.71712   TTTCATATAAAAAAA          GCAGTAAG TGTAAAATC CTTACTGC          TATCTCATCATATAT  91 33
        ccpB 4206138 .. 4206151 -  -3.9  -2.61602   TGAAGTTATAAGGTA               TGAAA TGCA TTTCA                GTTCAAGCTTTTTTC  45 28
GII78_RS21945 NONE
GII78_RS21940 4205117 .. 4205141 -   -10  -5.15381   AACAGATTTAAAAAA          GTCAGTGCGG ATCTG CCGCACTGAT          CTCATTACAATTGCT 100 30
GII78_RS21930 4202619 .. 4202650 - -12.4  -3.32993   CGATCCACACATTAA      TAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTA       CTTTTTGATTTCTTA  89 7
GII78_RS21920 NONE
      tet(L) 4198796 .. 4198830 -  -6.6  -5.26316   TCATTTTACAAAAAA     GGATCAACCTTG AATTACTTTCA CAAGATTGATCC     TTTCACTCATTTAGC  91 36
        satA 4196243 .. 4196264 -  -7.3  -5.86061   TCTTATCAAAAAAAA           GAAGGGGTT AAAA AACCTCTTC            TTTGAAAAAACGAAA 100 82
GII78_RS21880 4194497 .. 4194508 -  -5.8  -2.94322   AGTTCACGCAAACCA                CTCC CTTT GGAG                 ATTTTTTGATAGTTC  56 153
GII78_RS21875 4193660 .. 4193682 -  -9.9  -4.81359   AATTTAAATAGAAAA           GGAGTGAGC CTGAC ACTCACTCC           TTTTGCTCATGAATC 100 169
GII78_RS21855 4190322 .. 4190338 -  -5.1  -5.64421   ATTGGAAATAAAAAA              GGACC CGCTTAT GGTCC              TTTTTTGCTGTCATC  88 39
GII78_RS21845 NONE
GII78_RS21840 4188041 .. 4188051 -  -3.2  -3.28712   GTTGTCGTTGCAGAA                 CACC TGT AGTG                 TTTTGTCACCCTTTA  47 61
GII78_RS21825 4184919 .. 4184972 - -25.1  -3.19175   TCTTAACAGACGCAA TGGCTGAATAAGCAAAAAGCATCCCG CAT CGGGATGCTTTTT-CTTATTCACCCA TCTTCTCAATTTGTC 100 15
        hypR 4183390 .. 4183420 -    -9  -4.99947   TTCAATGAAATAAAA       CAAGCAGCAAAGGA GTT CCCTTTGCTGCTAT       TTCTGCTGATCCTTC 100 22
GII78_RS21805 4182580 .. 4182601 -  -8.1  -4.80167   CATGAAAAATGAAAA           GACATTCTT TGAA AAGAATGCC            CATCACAATTAATGT  95 34
GII78_RS21800 NONE
        gdpP NONE
        rplI 4178963 .. 4178986 - -15.4   -5.4505   TCGTGGAATAAAAAA          GAGGCTTGGA TGAA TCCAAGCCTC           TTTTCTATTAAGCTT 100 33
GII78_RS21770 4174922 .. 4174935 -  -3.8  -4.65895   GCCGCTATTGAAAAA               GCCA AACAGG TGGC                TAAGGAAAACAGTCC  69 146
        dnaB 4173252 .. 4173272 - -15.5  -5.26875   TTTCGAATGAAAAAA            CCCCAAGAG CAG CTCTTGGGG            CTTATGCGCCGGGCG 100 27
GII78_RS21755 NONE
        purA 4171200 .. 4171222 - -13.5  -5.27335   GCTTTCAAACAAAAA           CAAGCCCCT TAAAT AGGGGCTTG           CAGACATATTCTATT 100 40
GII78_RS21745 NONE
GII78_RS21740 4170785 .. 4170821 - -10.3  -3.27022   CGGACCTTACAGTAA   TTGCCCG-GAGAGCTG TCGTGT CAGCTCTCACAGACAA    ATAAGGAATTTAGCA  79 58
GII78_RS21735 NONE
GII78_RS21730 4170560 .. 4170581 -  -8.7  -5.79595   TCCTAAAAGAAAAAA           CGCACCTAC GATT GCAGATGCG            TTTGGTAAGTGGCTC 100 33
        walR NONE
        walK NONE
        walH NONE
        walI NONE
GII78_RS21705 4164662 .. 4164672 -  -2.4  -3.16187   TAGAAAAATTATACA                 GCGC AAA GCGG                 AGTGGCCTTCTTCGG  43 8
        htrC 4163341 .. 4163364 - -13.2  -4.34402   TTTTGCATATCAAAA          CAGCCTGGCA ACGA TGCCAGACTG           CTATGATTAACTGCC 100 32
GII78_RS21680 NONE
GII78_RS21675 4159117 .. 4159161 -  -9.9  -3.71672   CCGCATGAAAATCAA GCCGGCTGACATCCCAGAGCC TGA AACACCAAGACACCAGCCGGC CGCGGACTTAAAAGA  79 170
        rocD 4156479 .. 4156494 -  -3.9    -2.508   AAACGAAGTGAATAT              CCCGC CATGGT GCGGA               TTTATGCGTTTTGCA  45 27
GII78_RS21660 NONE
        rocF 4153880 .. 4153898 - -13.1  -3.59262   GTCGACACGCTGAAA             CCCCCGC GGGAT GCGGGGG             TTTTCTTATTACAGC 100 34
GII78_RS21640 4151853 .. 4151867 -  -7.1  -4.96848   TTGTTTACAGAAAAA               GGCCT TTATC AGGCC               CTTTTCGTTAAATCT  85 33
GII78_RS21635 NONE
GII78_RS21630 NONE
GII78_RS21625 4149525 .. 4149543 -  -4.6   -5.7946   GGTTCAACAAAAAAA             GAGACT TCATACC AGTCTC             TTCATAATTTGAGAT  91 40
GII78_RS21620 NONE
        fdhA 4147963 .. 4147986 - -13.2  -4.27441   ATTATCAGCAATAAA          GCCGG-CGTTC TGA GAACGTCCGGC          TTTTTCTTTTACTTC 100 34
GII78_RS21605 NONE
        rlmH 4146569 .. 4146613 - -28.2   -3.7014   CAAACTTTAATATAA CCAAAACAGTCCCTCCCCCA TTTGT TGGGGAAGGGACTGTTTTGG TATACAGGTAAAATC 100 45
GII78_RS21590 4143706 .. 4143747 - -17.7  -4.17263   TAATAACCATATAAA TAGACAAGCCCAATTTT TATTAAAG AAAATTGGGCTTGTCTA  TATTATTCTGGTTGT 100 28
GII78_RS21585 4142035 .. 4142056 -  -8.8   -4.2717   AGGATTTTATTAAAA           CAGGCATA TTCAAG TATGCCTG            TTTACTACTTTAAGA  83 86
GII78_RS21570 4136538 .. 4136564 - -13.9  -5.25906   ATAAATCAACAAAAA         GCCTCTCAAAA TAGGG TTTTGAGAGGC         TCACTATCAAACATG 100 32
GII78_RS21550 NONE
GII78_RS21545 NONE
GII78_RS21540 4131299 .. 4131335 - -13.8  -4.63527   GGATCATGCCAAAAA    CCCGAATCAGGCACTC GGTAA AAGTGCTCGATTCGGG    CCAGCTTCTTATAGT 100 34
GII78_RS21535 4129598 .. 4129638 - -22.1  -3.76048   CCGTAACTAATATAA  GAAAGCCGCAATATTGCCA GAT TGGCAGCATTGCGGCTTTC  TTTTTTATTCCAATA 100 91
GII78_RS21500 NONE
GII78_RS21495 4119453 .. 4119475 - -11.3  -4.69214   TATTTAACAAAGAAA           GACTGCCCC GGGGG AGGGCAGTC           TTTTTCGTTTAAGAA  95 34
GII78_RS21480 4117683 .. 4117708 -  -3.4  -5.01497   ACCATGATAGAAAAA        CCCATGCTGTTC CAGC GAAC--CATGGG         TTTTTCAGCTGTTAA  70 37
        yxaF 4115872 .. 4115890 -    -6  -3.97834   TAATTGTAGGAGAAA             GGATAACA AAA TGCTACCC             TTTTTTTCTCACCAG  65 20
        qdoI NONE
GII78_RS21460 4113442 .. 4113467 - -14.1  -5.57729   AAATAATAGAAAAAA         GTCTAGACGCC AATA GGCATCTAGAC          TTTTGTTTTCTTTAC 100 20
GII78_RS21450 NONE
GII78_RS21445 4110929 .. 4110957 - -14.6  -5.53991   GATTGATCAAAAAAA        CAGGCTGCCGAG TTAAC CTCGCCAGCCTG        TTTTACTATTTCCCA 100 31
GII78_RS21430 4107615 .. 4107633 - -10.3  -3.69408   AAAGAAACGAGATAA             GAGAGGG GATGT CCCTCTC             TTTTTGTCTTTCAAA  86 36
GII78_RS21420 4106414 .. 4106434 -  -5.4    -5.252   CATTCTCATAAAAAA            GAGAGGCT TCATC ATCCTCTC            TTTTTTTCTGTGTCA  86 16
        htpG 4104341 .. 4104367 - -11.7  -5.94713   ACTTTATAAAAAAAA        GGAATCGTCTCC TTAT GG-GACGATTCC         TTTTTCTGTTTACAC 100 35
        mmsA 4097825 .. 4097855 -  -7.6  -2.83271   CTATTGGCAGAATGA      GTCCGAACAGCGC ACATGG ACGCCGTTCGG-C       TGTTCGTCGTTTAGT  64 36
        iolB NONE
        iolC NONE
        iolD 4094035 .. 4094045 -  -6.8  -3.01712   GCCTCCCCTCTAATA                 CTGC TTC GCAG                 ATTCCAGCTTTTTCT  60 9
        iolE NONE
        iolF NONE
        iolG NONE
GII78_RS21350 4089791 .. 4089834 - -15.5  -3.32022   CGTTTTAGATATGAA GGGAGTTCGGCAGGA-A-GGC TGTC GCCATATCCTGCCGAACTCCA TGCTCAGCTTATGCC 100 34
        iolI NONE
        iolJ 4088001 .. 4088015 -  -8.5    -5.626   CACCGCACAAAAAAA               CCGCC ATCAA GGCGG               TTTCTGGTCTCTTTA 100 38
        yxdJ NONE
        yxdK 4086189 .. 4086221 -  -5.7   -5.0916   CGTTCAACATAAAAA      TCCCCTTGACA TAAATCCATGT TATCAAGGGGA      AACAAAGCGGGCTAT  81 61
        yxdL NONE
        yxdM NONE
GII78_RS21315 4083101 .. 4083124 -  -9.6  -6.28401   TAAAAAATAAAAAAA          CGGCACAGTCA TGA CG-CTGTGCCG          TTTTTTATGATTCAC 100 37
GII78_RS21305 4081521 .. 4081545 - -10.1  -5.10968   AGTAACATATAAAAA          GCTCAACAC AATGCGA GTGTTGAGC          TTTTTTTCTTACTGT 100 34
GII78_RS21290 NONE
GII78_RS21285 NONE
GII78_RS21280 4078603 .. 4078624 - -10.2  -5.52347   AATAAAACGAAAAAA           TCCAGCCT TCTAAG AGGCTGGA            TTTTTTATTATTTAG 100 33
        yxeI 4077444 .. 4077478 - -11.5    -5.626   GATTGTATAAAAAAA     CAGCTGACTCCAGAT ATTCA AACCGGAATCAGCTG     ATTGATGTGAATTAA 100 37
GII78_RS21265 NONE
        snaB NONE
GII78_RS21255 NONE
GII78_RS21250 NONE
GII78_RS21245 NONE
        sndB NONE
GII78_RS21235 NONE
        eutH 4069275 .. 4069297 -  -4.8  -3.89346   TCCCGATTGGACAAA           GTTGAAACAG CTT CTGCCTCAGC           TATGGCTGGCTGAGA  61 21
GII78_RS21225 4068366 .. 4068393 -  -8.4  -4.86939   TAAGAAACTGAAAAA        CGCTCTGGGC GCGGACCT GCCCAGAGCT         TACTTCTCCCAGGTC  95 25
        deoR 4067332 .. 4067343 -  -2.2  -3.35467   GTCACAAATCATTAA                CAAG CGCC CTCG                 CGGTATGCTGGTCAA  45 0
        deoC 4066513 .. 4066533 - -11.9  -4.36914   TGTTTCCTCAGAAAA            CGGAAAGCA GTC TGCCTTCCG            TCAGCTCTTAATAGT 100 33
        nupC NONE
GII78_RS21205 4063913 .. 4063939 -  -7.3  -5.32944   CCTATAATTAAAAAA         GCACACCCC GCTCAGCAT GGGATGTGC         TTTATTTTTTATTCT  95 34
        abnB 4054350 .. 4054367 - -11.3  -5.68039   AAACTCATAAAAAAA             CGCCTTC CTAC GAAGGCG              CTTCTCCATCTTATT 100 36
GII78_RS21160 NONE
GII78_RS21155 NONE
GII78_RS21145 NONE
GII78_RS21140 NONE
GII78_RS21135 4051062 .. 4051083 - -11.7  -5.60993   TGTTTTATAAAAAAA           CTCCAAAGA CACT TCTTTGGAG            GGGCAAAATTTATTT 100 35
        yxxD NONE
GII78_RS21120 4048727 .. 4048777 -  -9.9  -6.19302   AGAGAATAAAAAAAA CCTAAATGACACAGATTGCGAGAG TCTC CTCCTGC-ACCTGCACCATTTAGG TTTTGCCTGCTTTCG 100 240
        bglP NONE
        bglH NONE
GII78_RS21105 4044794 .. 4044807 -  -9.5  -6.23545   TCTAAATAAAAAAAA               GCGCC CTTG GGCGC                TTTTTTACAAATCTA 100 38
GII78_RS21100 4043706 .. 4043718 -  -6.9  -5.71638   TAAGAATCAAAAAAA                GGCCC CAT AGGCC                TTTTTACATTTTCCA 100 41
GII78_RS21090 4042309 .. 4042337 -    -9  -3.76393   ATAGCGCAACGCAAA        TCTCTTGTCTGA CTTGT TCATACAAGAGA        ATGTTGATGATACAG  78 298
GII78_RS21080 NONE
GII78_RS21075 4041453 .. 4041471 -  -8.9  -3.12962   AAAAGGGGAAAATCA             GTGTGAC TTCTT GTCACAC             TTGATCACATCCCAA  71 4
GII78_RS21070 4040158 .. 4040174 -  -2.1  -4.10161   TATGATGTGTTAAAA              GCCATCG ATT CCCTGGC              GTTTTAGCTCCTGAA  53 3
        dbpA 4038596 .. 4038625 - -11.5   -4.3129   CAGCCAGCAGCAAAA       TGACCTGCCCC TTTAACTG GGAGCAGGTCA        TTCATTATTTATTCG  91 30
GII78_RS21055 NONE
        licT 4035364 .. 4035416 -    -8  -5.86609   TGAAAAAAATAAAAA CCTAAATTACCATCAGCACAGA-CA GAGA TGATCCGCACTCATTGTAATTTAGG TTTTGCCTGCTTTAT 100 118
        bglS 4034446 .. 4034470 - -12.2  -3.57783   TCATTACAATCATAA          GAGCCTGCTA TATTG CAGCAGGCTC          TTTCACATTTTGCAT  90 40
GII78_RS21035 4030760 .. 4030778 -  -6.8  -4.25104   TGCTCCTTATGAAAA             GTATCTTC CTT AAAGATAC             AGGAGCCGATCAAAT  73 35
GII78_RS21030 4030426 .. 4030442 -  -7.3   -5.7946   TTTCCAATAAAAAAA              GAGACAC AGG ATGTCTC              TTTTTTTACTGTTTG 100 31
GII78_RS21025 4029597 .. 4029626 - -10.8  -2.70946   GTGTGGTAGAAACAT       TGAGCCATATCC CTTTTC GGATATGGCTCT        TTTCATTATTGATAA  78 31
GII78_RS21015 4026898 .. 4026924 - -12.4  -5.14965   ATTCCGATTAAAAAA         GGAAAGCTCC TTTTTTC GGAGCTTTCC         TCTGCCATTCATTTC 100 34
GII78_RS21010 NONE
GII78_RS21005 NONE
GII78_RS21000 NONE
GII78_RS20995 4023151 .. 4023180 -  -5.8  -6.01187   AAGCAAAGAAAAAAA       CACACTTGATTCC CTAGC GGAG-CAAGTGTG       TTTTTTATGTCATTG 100 35
GII78_RS20945 NONE
        galE 4012570 .. 4012591 - -14.5  -3.53012   CCCTTGTTCTTTAAA           GGCCTTCTC TATT GAGAAGGCC            TCCATTCTTATTCCG 100 33
GII78_RS20930 4010549 .. 4010573 -  -7.9  -5.37593   TTCTAAATGAAAAAA          TCCCTCTGC TTCAAGT ACAGAGGGA          TTTTTCTTTATTTAG  95 33
GII78_RS20920 NONE
        msmX 4006754 .. 4006775 - -14.5  -5.27779   TTCAATAGCAAAAAA           CCGGACATG TCTC CATGTCCGG            TTTTTTTGATCCTAT 100 37
GII78_RS20910 4005706 .. 4005721 - -10.4  -4.78237   CATCGGATAATAAAA              TCCGCC AGCA GGCGGA               CAGCGGGTATTTCGG  91 145
        cydA NONE
        cydB NONE
        cydD NONE
        cydC 3996000 .. 3996019 -  -9.3  -5.63517   TTTTCAAACAAAAAA            GACAGCC TTTTAG GGCTGTC             TTTTATTTTACAGGA 100 28
GII78_RS20870 3995076 .. 3995098 - -12.1  -4.71426   GGGGTATCAAGAAAA           GCTGTCTTC TCTCT GAAGACAGC           TTTTTTATCATTCAA 100 33
        sigY NONE
GII78_RS20855 NONE
        yxlD NONE
GII78_RS20845 NONE
GII78_RS20840 NONE
GII78_RS20835 3990347 .. 3990365 -  -5.9  -2.94099   GGTTTGCATCACACA             CGCCTGT ATCGG ACTGGCG             CTCGGCTTCGTTTTT  56 262
GII78_RS20820 NONE
GII78_RS20815 3986740 .. 3986759 - -10.7  -5.64274   TGACCTATAAAAAAA            CAGCCGG GATCAG CCGGCTG             TTCTAGATGCGGACA 100 15
        licR 3984592 .. 3984611 -  -6.6  -2.82516   GTTGCTATCATCATA            TTATGAAA TCGC TTTCATAA             ACACTCAGGGTTTTT  58 75
GII78_RS20805 NONE
        celB NONE
GII78_RS20795 NONE
GII78_RS20790 3981148 .. 3981168 - -12.5  -5.72254   GCAAATAAGAAAAAA            GCCGGCCCA TTA CAGGCCGGC            TTTTTTTACGCTTCA 100 31
GII78_RS20750 NONE
GII78_RS20745 3973356 .. 3973376 - -12.5  -5.80364   ATTGTAACAAAAAAA            GACCGCACG AAA CGAGCGGTC            TTTTTTATTATCGGA 100 33
        ywaC 3972580 .. 3972601 -  -8.7  -6.01187   AAGCAAAGAAAAAAA           GCGAAACCC TGTC AGGCTTCGC            TTTTGTTATCAATCC 100 34
GII78_RS20730 NONE
GII78_RS20725 3969947 .. 3969966 - -13.6  -5.99154   TATCAAATAAAAAAA            GACGGCAC TTGG GTGCCGTC             TTTTTTTTATAATGA 100 49
GII78_RS20705 3965536 .. 3965556 -  -5.5    -3.494   GAATGTGTGATACAA            CAAAAAAGG TGT CATTTTTTG            AAGATGCGATAAAGC  58 16
GII78_RS20700 3964538 .. 3964560 - -10.7  -5.76237   GAGACAAACAAAAAA           CGCTTTTGA TCATC TCAAAAGCG           TTTTTTTATATCTGT 100 42
        celB 3958283 .. 3958297 -  -7.8  -5.45652   AGCGGTAATAAAAAA               GCAGCA TAA CGCTGC               TTTTTTATTATTTAA 100 53
GII78_RS20670 3956559 .. 3956579 - -10.4  -6.02914   TCTACATAAAAAAAA            GCTGCCCC TGAAC AGGGCAGC            TTTTTCATTATTTTT 100 33
GII78_RS20645 NONE
        thiM NONE
        thiE 3951427 .. 3951447 -  -7.6  -5.22312   ATGGACAGCAAAAAA            GCTGTCCT TTTAC AGAACAGC            CTTTTGAAGGAAGAT  93 47
        efeU NONE
        efeM NONE
        efeB 3947424 .. 3947441 -  -9.9  -4.41348   TGTTTTTTAAATAAA             GAAGCCT GTAA AGGCTTC              TTTTATGATTCCAGC  91 28
GII78_RS20615 3946727 .. 3946744 -    -7  -5.85737   ACAGGAATAAAAAAA             GCTCTC TTTATC GAGAGC              TTTTTCCTTGTCTTT 100 15
        slrC NONE
GII78_RS20590 3942824 .. 3942839 -  -2.6  -2.58418   TCTTCATAGAAAACG              GCAG-AT CAT ATGCTGC              AGTCCTCTCATACCC  41 33
GII78_RS20585 NONE
        galT 3940040 .. 3940062 - -13.5  -4.93595   ATAAAAATCGAAAAA           GCCTCAACC CTAGC GGTTGAGGC           TTTTGACTGGTTTGG 100 12
        qoxA NONE
        qoxB NONE
GII78_RS20560 NONE
        qoxD 3935243 .. 3935262 - -12.2  -5.27399   GAAGACAGCAAAAAA            CCCTCTTC CAAT GAAGAGGG             TTTTTGTATTATTCG 100 34
        rodA 3933260 .. 3933281 - -10.9  -5.40072   CTCTGCCCAAAAAAA           GACAGCCTC TGTA AAGGCTGTC            TGCATATTAAGAATT 100 32
        nfsA 3932409 .. 3932426 - -11.3  -5.19879   CGTGAAACATAAAAA             CCTCTCC AGAC GGAGAGG              TTTGCTTTAGTTTTT 100 32
GII78_RS20535 3931227 .. 3931247 - -18.3  -5.29445   GTTGAATAAGAAAAA            GCCCTGCCG AAT CGGCAGGGC            TTTTTAAAGATCAGT 100 36
GII78_RS20525 NONE
        sacT 3927065 .. 3927088 -    -6  -5.84381   TGATCAATAAAAAAA          CTTCCAGAGA TCAC TCCCTGCAAG           TCAAAGCGGTTATTC  93 35
        scrA NONE
GII78_RS20505 3923154 .. 3923168 -  -2.9  -4.84311   TTTCACATAAGAAAA               TAGAA GGATT TTCTA               CATAAGCGTCCAAAT  65 23
GII78_RS20500 3922800 .. 3922818 - -13.2  -5.36441   TTTTCACAGAAAAAA             CTGCCGAT CCC ATCGGCAG             CCTGTTTATTTGATT 100 31
GII78_RS20490 NONE
GII78_RS20485 3920808 .. 3920820 -  -3.4  -5.14477   TATATACCTAAAAAA                TCAG ACAAG CTGA                CGCCTGCCAATATAA  73 13
GII78_RS20480 3920200 .. 3920214 -  -4.2  -2.63596   TTGGACGGGAGATCA               GTGGGA ATA TCCTAC               TGAAACGGCATACTA  47 38
GII78_RS20475 NONE
GII78_RS20470 3918620 .. 3918636 - -10.1  -5.65927   TACTCAAATAAAAAA              GCGCAGA TCA CCTGCGC              TTTTTACAAATCCTT 100 29
GII78_RS20460 NONE
GII78_RS20455 NONE
GII78_RS20450 3914949 .. 3914976 - -12.2  -5.64304   CAAGATAAGAAAAAA        GCCAATCACTCAT ATG ATGAG-GATTGGC        TTTTTTGTTTATAGA 100 34
        spsA NONE
GII78_RS20435 NONE
GII78_RS20430 NONE
GII78_RS20425 NONE
GII78_RS20420 NONE
GII78_RS20415 NONE
GII78_RS20410 NONE
GII78_RS20405 NONE
        rfbB NONE
        rfbD NONE
GII78_RS20390 3903892 .. 3903916 -  -3.6  -5.51165   AAAAGGGCAAAAAAA         GTCGAAGATGC CTCT GC-TCTTCGAT          TGATCACGTTCCTAT  81 43
        bslB 3903105 .. 3903127 - -11.4  -5.66684   GAATCCACAAAAAAA           GAGACTGAAA ACA TCTCAGTCTC           TGACTACAAATCTAT 100 44
        rocG 3901665 .. 3901681 -  -3.7   -5.0666   TACGCAAAAAACAAA              TGCAAAA TTA TTTTGCG              GAGGCTTCTCAAATT  72 39
        pruA 3899877 .. 3899904 - -12.1  -3.81062   ATCAAAAAGTTGAAA        TCGTGCGATCC GCTAAA GAATCGCACGA         TTTTATTTCTCTCAA  93 42
GII78_RS20370 NONE
GII78_RS20365 3896708 .. 3896729 - -15.9  -5.52909   TAACACGTAAAAAAA           GCTCTCCGG CCTC CCGGAGAGC            TTTTTCTATTGCGCC 100 31
GII78_RS20360 3895243 .. 3895256 -  -6.7  -6.04953   ATACAAACAAAAAAA               CCCTT TATA AAGGG                TTTTTAATTATAGGA 100 56
        bacA NONE
        bacB NONE
        bacC NONE
        bacD NONE
        bacE NONE
        bacF 3889231 .. 3889252 - -14.5  -5.07941   AAAAGCATATAAAAA           CATCCCGCT TTTT AGCGGGATG            TTTCTTGTAATGACC 100 15
         pta 3886270 .. 3886293 - -14.6  -5.09426   CGGAAGCGCAAAAAA          GGCAGCCCTC GGTC GAGAGCTGCC           ATCGCCTTCATTTTT 100 42
        cysL NONE
        ywfL 3884334 .. 3884362 - -11.7  -5.24129   GCTTGTGATAAAAAA        TGCATGCCGGC ATATACA GCCGGCATGCG        AAGAACGTTCACCCA 100 34
GII78_RS20300 3883177 .. 3883202 - -10.5  -5.06505   AATGACATAGAAAAA         TCCCAAAACGG GCAG CTGTTTTGGGA          TTTTCGCCATGTGCA 100 133
GII78_RS20290 3881912 .. 3881932 -  -5.4  -5.26875   TTGTGAAGCAAAAAA           GCCT-GACC TGAG GGCCGAGGC            TAAGAAAAAATATGT  86 43
GII78_RS20285 NONE
GII78_RS20280 3879915 .. 3879941 - -13.2   -5.7946   TTGTCAATAAAAAAA         GCAAAAGAAACG ATT CATTTCTTTTGC         TTGGTATGGTTAACA 100 35
GII78_RS20275 3878895 .. 3878905 -  -8.2  -2.91395   ACGCCCCCGATAAAG                 GGCC CAA GGCC                 TGAAGCGGCGGAAAC  66 489
GII78_RS20265 3877677 .. 3877707 - -11.2  -5.71712   GTTCATATAAAAAAA       CACACCCATCCCTC TAA AAGGGACGAATGTG       TTGATCATCCGTGGT 100 64
        thrS 3875193 .. 3875204 -  -4.4  -4.86862   GTCAAAAAAGCAAAA                TGTG AATT CACA                 GCTTTTATCCTACAT  71 35
GII78_RS20255 3874643 .. 3874663 - -11.8  -3.90729   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTATTATCCCTAT  91 37
GII78_RS20245 NONE
GII78_RS20240 3873022 .. 3873060 - -10.4  -4.57837   ATATCCCCCTAAAAA   TGAAAAACCCCGAGTC TTGTTTC GGCTCGGGATTTTCCA   TGTCCTATTTCTGTA  95 109
        speE 3869713 .. 3869733 -    -9  -5.00616   CTTTCCTGTAAAAAA            GCGCAAGA TTCGC TCCTGCGC            CATACCTTCATTATT 100 36
        speB 3868774 .. 3868796 -   -12  -5.63645   TTAAAAGATAAAAAA           GGGCCTGGAT GTA ATTCAGGCCC           TTTTTTATTAAAAAC 100 40
GII78_RS20180 NONE
GII78_RS20175 3861568 .. 3861580 -  -4.1  -3.85817   ACGTCCTTTTAGAAA                TGCAC AAC ATGCA                GCGGTTAAATCGTAA  56 30
GII78_RS20170 3859680 .. 3859728 -  -6.8  -3.91164   AATCCGTGAAAAACA TGACAGCAGCTTTTCAGAAACT CACAC AGTCTCATCAAAGCTGCTGTGA CTTTCAGCAACACAA  68 467
GII78_RS20120 NONE
GII78_RS20115 3850783 .. 3850806 - -11.8  -5.60993   TTTCTCATAAAAAAA          GGACAAAGCC CGAA GACTTTGTCC           TTTTGATCGTGATTA 100 38
        narK NONE
         fnr 3848655 .. 3848674 - -10.8  -5.55698   CACAAGGTAAAAAAA            CAAGGACA CCGC TGTCCTTG             TTTTTTTCAGTCAAT 100 32
GII78_RS20095 3847300 .. 3847320 -    -9  -5.88197   TCAAAGACAAAAAAA            CCGGCTCT ATTTA AGAACCGG            GCTCAGCGTTTTCAT 100 15
GII78_RS20090 NONE
        narH NONE
        narJ NONE
        narI 3840707 .. 3840724 -  -9.1  -5.24129   CCTTGGCAGAAAAAA             CCCCCTC TTGC AAGGGGG              ATTTTCACGAGCGTT 100 30
         cls 3838729 .. 3838744 -  -6.8  -3.48276   TTTTTTCTTACAGAA              CACCTG AAAA CAGGCG               GGCAAATGACTCTTT  64 2
GII78_RS20060 NONE
GII78_RS20055 3836334 .. 3836375 - -15.5  -2.52795   AAGCGCTCTAACTTA CATACAAAAAAGGATAGAC ATCT GTCTATCCTTTTTCTTATG  CTCTTACATAATGGA 100 21
GII78_RS20035 NONE
        acdA 3830270 .. 3830282 -  -3.4   -3.0516   TATCAATAATGAAAG                CGAT TTTGT ATCG                TTCTTATACAAACCA  45 140
GII78_RS20025 3829565 .. 3829592 - -17.2  -4.67697   GGTGAAAATAAGAAA        GCTCCCTTTCAA TTTC TTGAAAGGGAGC         ATAACGTACTATGTT 100 126
        pyrG 3827807 .. 3827836 -    -8  -5.85425   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAACGG-CAAGTC       TTTTTTATTACTTCT 100 33
       spo0F NONE
GII78_RS20005 3825619 .. 3825641 - -13.4  -4.27861   AAGATAGACGGAAAA           CCGCCTGTCA AGC TGTCAGGCGG           CTATAAAAAGTTCCA 100 47
         fsa 3824863 .. 3824899 -  -8.8  -4.32857   TCGGTGAAATACAAA   GGCCGCGGCAAACAG GCATAAAG CTGTTTGCCGCC-CC    TTTCATTATTTGTTC  83 31
GII78_RS19995 NONE
        glpX 3822213 .. 3822228 -  -8.2  -3.92659   TCTGCAAAAGTTAAA              GCGGGC TCAC ACCCGC               TTTTTCTGTTTGTTA  77 38
GII78_RS19985 3821826 .. 3821840 -  -3.6  -2.52681   AGAGGAAATAGATAC               GTCTTT CAT AAAAAC               ACCACGCTTTTCATA  45 50
         rho NONE
        rpmE 3820194 .. 3820216 -  -9.2  -5.53436   AGACAATATAAAAAA           CAGGCAAG ACTGCTG CTTGCCTG           TTGAGAAATCTATTA 100 41
GII78_RS19970 3819507 .. 3819527 -  -5.4  -6.12328   AGAATATAAAAAAAA            CACCGG TGTTTTTAG CCGGTG            CATTCTATCTTTATA  95 54
        malS 3817537 .. 3817551 -  -4.2  -3.50133   TAGCTTTACAAAAAG               CTTTCC CTC GGACAG               AAAAATTTACTCGCT  55 43
GII78_RS19960 3816501 .. 3816518 -  -9.1  -5.01042   AACCTAAAGCAAAAA             GCTCCCC GTAA AGGGAGC              TTTTTTTTGTTACGC 100 35
        prfA NONE
        prmC NONE
GII78_RS19935 3812993 .. 3813011 - -13.2  -5.44119   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTTATTAAAACA 100 33
      spoIIR 3811805 .. 3811816 -    -3  -3.69094   AATCTATGAGGCAAA                TCTA TTTT TAGA                 CCAGATGATTAGGAA  50 34
GII78_RS19920 3811248 .. 3811280 - -12.1  -4.63218   TGTCCTGTAATAAAA      CAAGCGTTATCCACA AAT TGTGGACAACGCTAA      TGAAGAAGTGGATAA 100 60
GII78_RS19915 3810047 .. 3810101 -  -6.6  -4.17296   TCCGACATACATAAA TAACCCCCTT-GGACACGC-CCCGCT TTTTT AGCCTATGCGTGTCCAAAAAGGGTTA GAACATCTGACTGCT  70 42
GII78_RS19910 3809450 .. 3809468 -  -4.6   -5.5353   TATATGAAGAAAAAA             GAAACG GCGACTT CGTTTC             TTTTATTGGTATATT  84 39
GII78_RS19905 3808930 .. 3808941 -  -2.2  -2.91873   AGGATTTGCAAATGA                CCTG TTTA CAGA                 TTTTCTGACAACTTA  41 38
        rpiB NONE
GII78_RS19895 3807769 .. 3807794 -  -8.4  -5.07652   TGTCTTAAAATAAAA         GAAAAGACTG GCTATG CAGTCCTTTC          ATTCGCACTCATAAA 100 24
        glyA 3806304 .. 3806328 - -11.4  -5.04987   AACATCGTCAAAAAA         CCCGCC-GGGC ATAA GCCCAAGCGGG          TTTTAGGATCTTAAT 100 36
GII78_RS19885 3805547 .. 3805570 - -11.8  -5.63504   AACTGGATAAAAAAA          TGAAACCCCC TTTT GGGGATTTCA           TTTTTTATTTTGTTC 100 30
GII78_RS19880 NONE
        atpB NONE
        atpE 3803710 .. 3803741 -    -3  -3.67481   TCAGACATAAAGCAA      TGGCGAAGGTTCTCT TGG AATGATC-TTCGCCA      TTTTTAGTTCATATA  50 53
        atpF NONE
GII78_RS19860 NONE
        atpA 3800987 .. 3801013 - -13.2  -4.57569   TCATCTGCGTAAAAA         GAGAGAAAAAGA GAA CCTTTTTCTCTC         ATCAGCATTCGAGTT 100 39
GII78_RS19850 3800097 .. 3800109 -  -6.2  -3.59979   TCTTTCTATTCTAAA                GCGG CTGCT CCGC                CGACAATTTCCGTAA  61 3
        atpD NONE
GII78_RS19840 3798190 .. 3798210 -  -9.8  -5.60993   GCGTTCATAAAAAAA            TCCTTCTC TTTAT GAGAAGGA            TTTTTTCTTATTTCC 100 33
GII78_RS19830 3797307 .. 3797324 -  -2.1  -4.12188   TGACGATGGTCAAAA             CCTAT-TA AAA TAGATAGG             GAAGCTGCTGTGAAT  53 12
GII78_RS19825 NONE
        murA 3795054 .. 3795078 - -10.1  -6.07374   ACAAAAAATAAAAAA          CCAGTATGCCA GAG TGACATACTGA          TTTTCAAGTAAGTTT 100 39
      spoIID 3793835 .. 3793867 - -16.5   -3.2247   AAAGATATTCAGGAA      CAGAAAAAGACGCCC AAT GAGCGTCTTTTTCTA      CTTTTTCGCCATATA 100 23
GII78_RS19810 3792767 .. 3792788 -  -8.7  -5.03994   TGTTACATACAAAAA           GAGGCTGAC CATC ACCAGCCTC            TTTTTTCTTATTTAG 100 33
GII78_RS19805 NONE
GII78_RS19800 3791765 .. 3791782 -  -6.2   -5.9003   AAACCAATAAAAAAA             GGCGCC TGGGGG AGCGCC              TGATTTTTAGGTTCC  93 41
GII78_RS19795 3791377 .. 3791398 -  -5.1  -5.03994   TCTGAGACACAAAAA           GAGCCCTCT ATAT AAAGGGCTT            TCACAGGATGTGATG  76 169
        fdhD NONE
        moaA 3789430 .. 3789453 -  -8.9  -5.46657   GATTCTAATAAAAAA          GCTTACCGG ACAGTG CCGATAAGC           TTTTGACTTCAAATT 100 39
        rapB 3788117 .. 3788134 -  -9.9  -5.71712   TTGCATATAAAAAAA             CCATCTG CCAG CAGATGG              TTTTGTCTCATACTT 100 33
GII78_RS19775 NONE
        csbD 3787209 .. 3787233 -  -7.9  -5.83226   AAGCGAACAAAAAAA          GACAAGAAACA TTT CGTTTCCTGCC          TCTTCCGTACGATTA 100 38
        ureA NONE
        ureB NONE
        ureC 3783812 .. 3783832 -   -14  -3.68988   TTTTAGTCAATAGAA            CGGCCGGA TGCAC TCCGGCCG            CGTCTTATCAGAATA 100 33
GII78_RS19740 3783291 .. 3783316 -  -9.9  -2.59742   GTTAACGGTGAGAAG         TCATCCCTTTT GATT AAAAGAGATGA          TTCATAACATCTTTT  74 13
GII78_RS19735 3782564 .. 3782593 - -13.7  -2.79276   AGCACTTATTAATGA       GAAAAACCCGGAG CTGG CTCCGGGTTTTTT        ATTATTCCGCTTCGC 100 27
         mta 3781242 .. 3781277 - -16.3  -2.53822   CCGATCTTATAAGAT    GCGAAAACCCCCAGCC TTTAC GGCCGGGGGTTTTC-C    TGATGGTCACAGTAA 100 7
GII78_RS19715 3779065 .. 3779105 -   -12  -5.47218   CTGCATGCAAAAAAA CACACCCGGATCGTCTGGA AAAT CCCAGA-AATCCGGGTGCA  TCTCTTCTTTAATAC 100 34
      spoIIQ 3776798 .. 3776818 -  -5.4  -5.82172   AGTAACAGAAAAAAA            CGCCCATC ACAAG GATAGACG            TTTTATTCATTAAGA  91 35
GII78_RS19690 3776266 .. 3776293 - -12.1  -4.89838   CTAAGAAAGACAAAA        GCCGGC-GTCTT TAACC AAGACAGCCGGC        TTTAATATTTCTCAT 100 27
GII78_RS19670 NONE
GII78_RS19665 NONE
GII78_RS19660 3771028 .. 3771051 -  -7.4  -5.38549   CTTAAACAAGAAAAA          GAGACAGACC TCAG AGCCCGTCTC           TTTCTCAAGATGCAG  95 30
        pucI NONE
GII78_RS19650 3767863 .. 3767883 - -13.3  -5.71712   TTGCATATAAAAAAA            GGCGTCCTC TTA GAGAACGCC            GCTTATAGCAGTTAT 100 37
GII78_RS19635 NONE
     spoIIID 3765414 .. 3765424 -  -5.4  -3.04517   ATCCTCCTTGAAAAT                 CTGT TTC ACAG                 TAAATATCCACATTG  53 157
         mbl 3764357 .. 3764379 - -10.7  -5.60993   TTTTTCATAAAAAAA           CCTCATTCT TTTTC AGAATGAGG           TTTGTGAAATCAGCT 100 35
        flhO NONE
        flhP 3762204 .. 3762215 -    -3  -4.06533   GAAAGTATTAAAGAA                TCAA GAAT TTGA                 AATGAATTCACCAGT  56 382
        fabZ 3760833 .. 3760858 -  -6.9  -5.95539   TTGTAAAGAAAAAAA         GACAAATGTGCC GCT GGC-CATCTGCC         TTTTTTCAATTATTC 100 35
        mscL 3760375 .. 3760395 - -11.9  -6.02914   TTGAGATAAAAAAAA            GACGCCGTT TAT AACGGCATC            TTTTTTATTCCGGCG 100 30
GII78_RS19590 NONE
GII78_RS19585 3758826 .. 3758846 - -15.5  -5.14563   TTCTGCATGAAAAAA            GCTGCCGTT TTG AACGGCAGC            TTTTCTTTTCGTGCT 100 56
GII78_RS19575 3757763 .. 3757775 -  -3.3  -4.67168   AAAAACGCTTAAAAA                TGGCT TTC AGCCT                CTGTTTTTATCTTTC  64 19
         ssb 3757264 .. 3757280 -    -8  -4.52502   GGCAAAAAGAAAGAA              CCAGTC TGGTC GACTGG              TCAATTTTGAGGGGA  82 96
        glcR NONE
GII78_RS19560 3755375 .. 3755395 - -15.5  -5.19212   ATCATGACTAAAAAA            GCTGGCTCT GAT AGAGCCAGC            TTTTTTCCGTTCATA 100 118
GII78_RS19545 3750624 .. 3750644 -  -5.4  -5.60993   TCTCGCATAAAAAAA            TCCCGC TAAAGGCGT GCGGGA            TTTTTATGTTGCATA  88 29
        tkmA NONE
        ptkA 3748940 .. 3748968 - -11.9  -4.56597   CTTTTTTCGCAAAAA        TAAATAACGGGCA CGA TGCACGTTATTTA        TTTTGCATGAAATTG 100 19
GII78_RS19530 3747977 .. 3747991 -  -5.6  -2.85503   CTCCAACAGTTAAAT               TGCTGC TTT GCAGCT               TCCGTAATATCGTAT  52 183
        uglF 3746601 .. 3746619 -  -6.7  -5.62219   AATAGATGAAAAAAA             GACTGGT GCGCA ACCAGCC             TTTCTTTTTCATCTA  93 38
GII78_RS19520 NONE
GII78_RS19515 3745351 .. 3745363 -  -2.6  -3.68378   TTATATTTTAAAATA                GCCA GAAGG CGGC                TTAAATAGGGTAAAT  50 135
GII78_RS19510 NONE
GII78_RS19505 3744445 .. 3744458 -  -3.8  -3.55622   TGCAACTCCCTGAAA               CGCT TTTTTC AGCG                TATTCAGCTGCTCCT  52 132
GII78_RS19495 3742077 .. 3742102 -  -8.9  -5.09426   TTTAAGTTTAAAAAA         CCTCGAGAGGC AAGC GCCAATCGAGG          GAAGGTTAGTTTTTT 100 116
GII78_RS19490 NONE
GII78_RS19485 3740870 .. 3740892 -  -8.5  -5.44721   ATTACTGTAAAAAAA          CTTGCCGATG ACAA CA-CGGCAAG           TTTAAACTACAGCAA 100 32
GII78_RS19480 3740133 .. 3740148 -  -3.3  -4.47183   TATCATTGAAACAAA              CAGAT AGGATA ATCTG               CTTTTTTATTACTAT  62 37
GII78_RS19475 3739308 .. 3739333 -  -5.5  -5.77988   ACACATACAAAAAAA         CACTTGATGACT TAG AGCC-CCAAGTG         TTACATGTGATTTTT  88 26
GII78_RS19465 NONE
GII78_RS19460 3737459 .. 3737474 -    -9  -5.38047   CATTTATAGAAAAAA              GCACCT TGAC AGGTGC               TTTATTTATTTTGGC 100 31
         ggt 3733610 .. 3733658 -  -9.8  -5.73672   AAATAACTAAAAAAA TATCAAAAAAAGAACACCCAGAG TAAG CTCGGGGTGTTCTTTTAT-GAAA CGTTTTTCCTTTTTC 100 412
        cotH NONE
        cotB 3729616 .. 3729638 -  -3.4  -4.74103   CCTTTAACTGAAAAA           GGGCATCA CTTAATC TGATGCTC           CTCCATTATCTATTA  67 38
GII78_RS19410 3728877 .. 3728902 -  -4.7  -5.01811   GTATGAAACGAAAAA         CTGCCTTCT GCTTTTCA AGAGGGCAG          TTTTGTATACACTAG  76 37
        alsS NONE
        budA 3723676 .. 3723700 -  -7.2  -5.31519   AGAGCCAAATAAAAA          GAAAGCCC TGCTAAAAG GGGCTTTC          TTTTTTTCTTTTATT  95 36
GII78_RS19385 3723050 .. 3723081 - -12.4  -4.42806   GGATTTTTAAACAAA      TACAGCCCTGCC GTATGTTG GACAGGGCTGTA       TTTTAAACAAAAGGC 100 28
        pgsB NONE
        pgsC NONE
        pgsA NONE
        edmS 3712518 .. 3712541 -   -14  -5.27335   CTGGGCAAATAAAAA          GAGAGTGTCT CATC AGACACTCTC           TTTTTTGAATTATTT 100 35
        pgdS 3711142 .. 3711160 -  -8.9   -5.0065   TATGCATAAAGAAAA             GACTCCA GAGAT TGGAGTC             TTTTTCTTTTATTGC 100 34
GII78_RS19305 3707417 .. 3707438 -  -9.4  -4.13343   ATAAACCGCTGAAAA           GGGTGCGC CTAATT ACGCACCC            TTTTTTTTATGTTCC  85 32
        manA 3702478 .. 3702500 -  -9.3   -5.7946   TTTCTAATAAAAAAA           CTTAATCTC GAAGT GAGATTAAG           TTTAAATATGAGACA 100 27
        lytD 3699701 .. 3699724 -   -14  -5.08367   AAGATAAATCAAAAA          CACCTTTTGC AGCC GCAAAAGGTG           TTTTTTTTATTGATA 100 32
        tagD 3691859 .. 3691877 -  -4.6  -6.01369   CAAACAAGAAAAAAA             GAAGCAAC TGA ATTACTTC             AAGCCTCTTTAAGTT  95 48
GII78_RS19240 3690575 .. 3690592 -  -2.8  -3.44608   AAACAGGCATTACAA             TTGAAA ACAACA TTTCAA              GTACTCCTTTAAAAG  46 50
GII78_RS19235 3689241 .. 3689251 -    -4  -4.52589   TTGTTTTATAGAAAA                 GAAT TAG ATTC                 GTATTAACCTCTTAA  63 18
GII78_RS19230 NONE
GII78_RS19225 NONE
GII78_RS19220 3683633 .. 3683684 -    -7   -5.1485   CAACTAATATAAAAA GAATAGTTCTAAAAAAAGAT AAGATAACAACA ACCTTATTTTAGAACTATTC ATGTAATTAATTTTT  90 32
        tagG NONE
        tagH 3681012 .. 3681037 - -12.7  -5.34381   AAATCTAAACAAAAA         GGCTATTGGAC ATTC ATCCAATAGCC          TTTTTTTATTTCAAC 100 31
GII78_RS19200 3678365 .. 3678383 -  -2.4  -2.69799   CTATTTCATATATTA             GTGAAAAG ATC CTTCTCAT             CTTCAAGCTCCTTCT  40 60
GII78_RS19195 3676828 .. 3676842 -    -5  -4.42653   ATTTCATTCACAAAA               GCTCAT ATA ATGAAC               AAAAACAGTATAAAA  68 46
GII78_RS19190 NONE
GII78_RS19185 3673681 .. 3673707 -   -16  -5.56372   AAAGTAAAACAAAAA         GAAGCTTCGCAC AAT GTGCAAAGCTTC         TTTTTTATTTGCCTG 100 30
GII78_RS19175 NONE
GII78_RS19170 3669997 .. 3670021 - -15.1  -3.66349   AAATCAAATAACGAA          CAAAGGAGGCA TCT CGCCTCCTTTG          ACTCTAACAATCTTT 100 40
GII78_RS19165 3668396 .. 3668432 - -14.4  -5.26316   TTATCGTATAAAAAA    GCTTGCCGGCAATTCC TGATG GGTTCTGCCGGCAAGC    CGCTATTGATGTCTA 100 54
        tarQ 3666292 .. 3666319 - -11.5  -5.41143   TATTGTTTAAAAAAA        GAGACAAATCA TTTTAC TGATTTGTCTC         TTTTCGTTGTGAAGC 100 43
GII78_RS19155 NONE
GII78_RS19150 NONE
GII78_RS19145 NONE
        tuaD NONE
GII78_RS19135 NONE
GII78_RS19130 NONE
GII78_RS19125 NONE
GII78_RS19120 3657039 .. 3657064 -  -2.6  -3.78682   GTATAATCAAAAAAC         GCGCA-TCCCA ATTTA TAGGACTACGC         ATGTTTTTGAATCCC  50 20
GII78_RS19115 3655815 .. 3655834 - -10.7  -5.60993   TTGCGCAGAAAAAAA            CTCCGGC ACATAA GCCGGAG             TTTTTAATTCCTTTT 100 29
        degS NONE
        degU 3651757 .. 3651780 -  -8.9  -5.44119   GGCAGCCTAAAAAAA          GACCTGCCT AGTAAA AGGCAAGTC           TCCTATTATACTATC 100 36
GII78_RS19090 3650820 .. 3650840 -  -8.3  -5.86465   AAGAATATAAAAAAA            TCTCCGCTC TAA AAACGGAGA            TTTGGCCTTATTTAA 100 33
       comFA NONE
       comFB NONE
       comFC 3648300 .. 3648318 -  -3.1  -4.84761   ATATCGGCATAAAAA             CAGAATC ATTTA GCTTCTG             ATCAAGGTAAAAGAT  67 16
GII78_RS19070 NONE
        flgM NONE
GII78_RS19060 NONE
        flgK NONE
        flgL 3644503 .. 3644521 -  -3.1  -5.71983   TGAACTATAAAAAAA            GCGAACTC CTAA GAGC-CGC             TTACTTTAAAAAGTC  84 26
GII78_RS19045 NONE
        fliW NONE
        csrA 3643227 .. 3643247 -  -6.9  -6.23317   ATAAAAATAAAAAAA            TCCTCAC TTTTTTT GTGAGGA            TAATGCGGAGATCAC 100 8
         hag 3642235 .. 3642255 - -15.5  -5.13648   GAAATATAAATAAAA            GACCTTGGC AAC GCCAAGGTC            CTCTCTAAAATTAAC 100 36
        flaG NONE
GII78_RS19020 NONE
        fliS 3639765 .. 3639784 -    -2  -2.64735   AGTTGATCTATATTA            TTCATGCG ATCC CGCCTGAT             CCGTGCCGGTCCTTC  40 7
        fliT NONE
GII78_RS19005 3638929 .. 3638939 -  -2.6  -2.51057   GCTGAAACATAAATC                 TTTT GTG AAAA                 TTCAGTTAACTTTGT  41 127
         hpf 3638248 .. 3638270 - -11.3  -5.74684   TAAGAAAAACAAAAA           CCTTCCGCG GACAT CACGGAAGG           CTTCTCTTCATTATT 100 36
        secA 3635541 .. 3635565 -   -15  -2.83772   ACCTCATTAAAAGAT         CCGCAGGCGCC TGCA GGCGCC-GCGG          TCAGTAAACTTGCCG 100 48
        prfB 3634385 .. 3634407 -    -7  -5.66868   AAGGAATTAAAAAAA           CACACCCG TATGCAT CAGGTGTG           TTTTTCAGCTTATGA 100 35
GII78_RS18985 NONE
        cccB 3632983 .. 3633009 - -16.7  -4.91712   GTCAAGGCATAAAAA         CATCCTTGCCG GCACT CGGCAAGGATG         TTTTTATCTTACTTT 100 34
        ftsE 3632104 .. 3632114 -    -4  -2.76453   CGAGAATTTTAATCA                 TATG AAC CATA                 CTCCCCTCTTGACTC  46 8
        ftsX 3631177 .. 3631211 - -14.5  -3.95126   GAAAAAGAAGGCAAA    TG-AAAAGCCGTCCCG AAAA CGGAACGGCTTTTTCA     CTTTATACTCGCAAA 100 28
        ctpB 3629611 .. 3629630 - -12.2  -3.91213   AAGCACAAAGAAACA            GGAGATGG AATA CCATCTCC             TTTAATTGACAAATA  93 27
        swrA NONE
        minJ 3627583 .. 3627618 - -14.7   -4.2803   CAGCGTAACGCAAAA    CAGCTCGGCATCGCA TCTTCC TGCGGTGCCGGGCTG     CCTTTTATGATCCAG 100 30
GII78_RS18935 3622338 .. 3622362 - -11.6  -5.24129   TTTGTGTATAAAAAA          CCTGCTTTTA AAACG TAAAAGCAGG          TATTCGGTCTTTATA 100 56
        uvrB NONE
        uvrA 3617278 .. 3617316 - -11.1  -5.27335   TGCCGTAAAGAAAAA  GCTTGCCTGCTAAGCCCA AGGA TGGACTT-GCTGACAAGC   TGTCCCCTCTTAACA 100 50
         hag 3616108 .. 3616147 -  -7.9  -5.80364   ATTGTAACAAAAAAA  GCCTGCCGGCACA-TCCA GTTAA TGGACTCTGTCGGCAAGC  TGTAACTATCAGAAA 100 58
GII78_RS18910 NONE
GII78_RS18905 NONE
GII78_RS18900 NONE
GII78_RS18895 3613499 .. 3613516 -  -8.4  -5.13473   ACCACATGTAAAAAA             GCTGCC TTTGCG GGCAGC              TTTTTTTATTTTTTT 100 31
GII78_RS18880 NONE
        cypX 3609313 .. 3609334 - -10.1  -3.97602   ATATATGTAAAAAGA           GTCTCACCC GCAT GGGAGAGAC            CTTTGGAATTCTATT  85 39
GII78_RS18865 3604786 .. 3604814 - -14.7  -6.22802   TTTCATAAAAAAAAA        GCCTCCAACCCTT TTT AAGGATTGGAGAC        ATGGCGAAAATCAAA 100 11
GII78_RS18845 NONE
GII78_RS18840 NONE
GII78_RS18835 NONE
        ppaX NONE
        hprF 3598035 .. 3598058 - -12.5  -5.27477   ATTTTAACCAAAAAA          GTCCGCTGA TGTTAT TCAGCGGAC           TTTTTCAATCTTTCT 100 13
GII78_RS18810 NONE
GII78_RS18805 NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
GII78_RS18775 3589673 .. 3589691 -  -8.8  -5.54907   TTCACAAAACAAAAA             GAGCCGTA TCA TCCGGCTC             TTTACTCTTCAATCT 100 27
GII78_RS18770 NONE
GII78_RS18765 3586788 .. 3586800 -  -3.4  -3.09908   CTTTCTGAAAATAAG                GAAG TCACT CTTC                ATATTCCTCCTAAGA  45 35
GII78_RS18760 3586401 .. 3586427 -  -8.1  -5.50723   TGATCAAAATAAAAA         TCTCCCACTCA TTGTT TGAATAGGAGA         TTTTTGTGTTAGACA 100 34
        bmrA 3584450 .. 3584472 -  -8.5   -4.1964   CTCAATAGTTCAAAA           GGAAGGATT GGGAA AATCCCTCC           TCTTTTTTATTGGCT  81 55
GII78_RS18750 3582888 .. 3582910 - -10.7  -5.68438   CTATCAAACAAAAAA           GAGTCGATT AAATA AATCGACTC           TTTAAAATTTACTAT 100 37
        cwlO 3581098 .. 3581120 -  -9.9  -4.68209   ATGTTAATAAAGAAA           GAGCCTTCT GTTTT AGAAGGCCC           TTGTCATATTTATTA  91 38
        trxB 3579823 .. 3579850 -  -3.5  -5.64274   TTATGGACAAAAAAA        GGACACGGAT AACTGGAGA ATCCGTG-CC        AAAAAAGTGTATTCA  84 153
GII78_RS18735 NONE
        rapZ NONE
        mgfK NONE
        whiA NONE
GII78_RS18715 NONE
GII78_RS18710 3575269 .. 3575289 - -11.9  -5.18726   TGTTCATAAGAAAAA            GCTTGCAGA TAA CCTGCAAGC            TTTTCACGTTACAAA 100 34
        psdR NONE
        psdS 3573079 .. 3573092 -  -2.3  -4.91109   TCTTTATTATAAAAA               GGAAG TCAG CATCC                TCCCATCGAACTTTC  66 62
        psdA NONE
        psdB 3570323 .. 3570344 - -14.5  -5.09521   TCAATAAATCAAAAA           TCCGGTCTG ATAA CAGACCGGA            TTTCATATTACATAC 100 33
GII78_RS18675 NONE
        sulP 3566728 .. 3566744 - -10.8  -5.28778   AGCATGCATAAAAAA              GCGGCC GCGAT GGCCGC              TTTTTTTAACCTGTG 100 31
GII78_RS18660 3565602 .. 3565624 -  -9.2   -5.7827   AAGAGAAATAAAAAA           GAGATTTCCC TTA AGGAAACCTC           ACTTTGTTAAAAACT 100 112
GII78_RS18655 3564547 .. 3564557 -    -4  -3.76568   TTACCGATAACAGAA                 TAAG GCG CTTA                 CAGCGTTGATTCTCG  54 23
        mdxD 3562610 .. 3562620 -    -4  -3.62849   TTTACGAAACTATAA                 CAAT TGT ATTG                 TCCTATAGAAAGCGG  52 78
        mdxE NONE
        mdxF NONE
        mdxG NONE
GII78_RS18630 NONE
        mdxK NONE
        malL NONE
        pgmB 3553606 .. 3553631 - -13.4  -3.88015   AAAGTAATAACACAA         CCTGCAAGAG CTGCGT CTCTTGCAGG          TTTTTTTCATTTCAA 100 37
GII78_RS18605 3552378 .. 3552390 -  -3.5  -3.29252   GGGGAGCAAATAAAT                TTTTA TTT TAAAA                CTATTCTCGCTTATC  48 294
GII78_RS18595 3549563 .. 3549607 -  -3.8  -5.04868   TGAAATGAAACAAAA CAAAAAAGACAA-GA-GTGGCA AGT TGCCAAACCATTGTCTTTCCTG TTGTTTGATTGGACG  72 132
GII78_RS18590 3548921 .. 3548942 - -11.7  -3.75115   TCTTCATAAAATCAA           GGCATATAC AGCT GTATATGCC            TTTGCCATTAAGCTT  91 33
GII78_RS18555 NONE
        racX 3540157 .. 3540182 -   -12  -5.82172   AGGAACATAAAAAAA         CAAGGACTGT TTGAAG ACAGTCCTTG          TCTGAAGCTAGCTTT 100 33
GII78_RS18545 NONE
        padC 3539047 .. 3539088 - -20.5  -4.76041   CATACTCAGCAAAAA GAAAACCCGGAAAAGAGAA GTAA TTCTCTTTTCCGGGTTTTT  ATGTTTATTATAATC 100 33
GII78_RS18520 NONE
        epsB 3535157 .. 3535175 -  -7.4  -3.10894   ACGACCAGCATCTAA             GGCAGC AACTTCA GCTGCC             CACAGCAGAGCCGAG  62 84
GII78_RS18510 NONE
GII78_RS18505 NONE
        epsE NONE
GII78_RS18495 NONE
        epsG NONE
GII78_RS18485 NONE
GII78_RS18480 NONE
GII78_RS18475 NONE
GII78_RS18470 NONE
GII78_RS18465 NONE
GII78_RS18460 NONE
GII78_RS18455 NONE
GII78_RS18450 3520879 .. 3520905 - -11.7  -4.80487   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG 100 7
        rpoN 3519249 .. 3519267 - -10.3  -5.41143   GATTCCTTAAAAAAA             TCCTCCC GTCTA GGGAGGA             TTTTATTTATATCGC 100 28
        lutR 3516526 .. 3516549 -  -9.6  -4.65895   GCTGCCATGTAAAAA          GACTGAACCA TTTG CGGCTCAGTC           TCAGTTGTTCGTATC  91 78
        ganR 3515407 .. 3515426 -  -9.4  -5.65927   TACCTAAATAAAAAA            TGACTTAG TGTC CTAAGTCA             TCCTTAATTCATACT 100 29
        ganS NONE
        ganP NONE
        ganQ NONE
        ganA 3509764 .. 3509782 -  -8.8  -4.77122   CTATAGAAAAAAGAA             TCCGCCCA TAT CGAGCGGA             GCATCAGCCTAATGT 100 34
        ganB 3508371 .. 3508414 -  -9.8  -5.10933   TGATGTAAAATAAAA TGATCCATGAGACATAACAA TGAT TTGTTACATCTCATGGATTT TTTTGTTTCAGCGTT 100 33
GII78_RS18385 NONE
GII78_RS18380 NONE
        yvfT 3503240 .. 3503259 -  -3.6  -3.72374   CCTCAGCAATAAACA            GACGAA TCATTCTT TTCGTC             CTCCAATCATTCTGC  54 32
        yvfU 3502615 .. 3502636 -  -8.7   -4.8048   GTGGCATATCAAAAA           CACTCCCGA TCTC CCAGGAGTG            CAGTATATGGTTAGA 100 36
        lutA NONE
        lutB NONE
GII78_RS18355 3499537 .. 3499558 -   -13   -4.8622   TTTTTCAAGCAAAAA           GCCCGGCA TATGCC TGCCGGGC            TTCCTGAGTTCAGCG 100 35
GII78_RS18350 3498064 .. 3498108 - -10.9  -5.93252   TTCAAAAACAAAAAA GCCCGCCGTCTC-CTACCTA ATCTAA TAGATAAAGAGACGACGAGC CTTCGGCTGACCGCG 100 343
GII78_RS18345 3496647 .. 3496672 - -19.1  -5.34365   GCACAATAATAAAAA         CCCTCTTGCCG GATG CGGCAAGAGGG          TTTCTTATTTACTGA 100 34
GII78_RS18335 3494731 .. 3494743 -  -4.9  -4.19624   CATTGTTAATAGAAA                CTAAT ATA ATTAG                TGATTTATTTTCCAA  65 30
GII78_RS18325 3492802 .. 3492830 -  -6.8  -5.87996   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTATAGTTGT  93 40
        araE 3490070 .. 3490093 -  -9.6  -4.20368   GCATCCCAATATAAA          CAGCCCTTCC CGTA GAAAGAGCTG           TTTCATTAAAGCGTT  86 42
        cggR NONE
         gap 3487646 .. 3487670 - -12.2  -4.65895   GTCTTCATGGAAAAA          GGGAAAGGGA GTCCG TCCCCTTCCC          TTGTCCGCTTTCATT 100 91
         pgk NONE
GII78_RS18295 NONE
        gpmI NONE
         eno 3482561 .. 3482585 -  -9.2  -5.42265   TGAAAGCATAAAAAA          GCCGCCGAGA GAAAA TCCCGGCGGT          CTTTTTATTACTTGT 100 33
GII78_RS18275 3480112 .. 3480141 - -20.9  -4.56775   ATGCTCTTTTAAAAA       CAACCCCATCACC TGCT GGTGATGGGGTTG        TTTTATTGAATAGAC 100 28
GII78_RS18260 3477841 .. 3477874 - -12.6  -5.07652   GTGCCGAAAACAAAA     GAAAGCAGCTCTCT AAAATA AGAGAGCTGCTTTT      TGTATCATGAGGTTA 100 30
GII78_RS18250 NONE
       opuCB NONE
GII78_RS18240 NONE
       opuCD 3473572 .. 3473591 -   -10    -5.055   CGAAGCCGTAAAAAA            CGCCCTGT CATT ACAAGGCG             TTTTTTCTTATGCGG 100 33
GII78_RS18225 NONE
       opuBB NONE
GII78_RS18215 NONE
       opuBD 3469268 .. 3469303 - -17.2  -3.68529   AGTTTACGATTTAAA    TAGAAAAAAGAGGCTGG ACT CCAGCCTCTTTTT-CTA    TTCTATGCAGCTGAT 100 28
GII78_RS18185 3465750 .. 3465766 -  -3.5   -4.7219   CATAGGAATAGAAAA              CGCTTGG CTT CCTTGCG              TTTTTTGTTACTTTA  67 38
        secG 3464522 .. 3464545 -    -4  -5.71983   TTAATCAGAAAAAAA          CGTTT-TGAAT ATC ATCCAGAAACG          TGAAAAAGGCCTGAC  85 70
GII78_RS18170 NONE
         rnr 3461321 .. 3461348 - -10.7  -4.41348   TGTTTCCGAAAGAAA        GCAAATAGAGC GCTGCG GCCCTATTTGC         TGGTTGAGCTGCTAT  95 37
        smpB 3460710 .. 3460742 -  -8.6  -2.92175   CGTGAACACAGTATA     GCACAG-GCCTGATT TTCG AATCAAGCACTATGC      CTTTAGAAGCCTTTT  69 28
        ssrA 3460164 .. 3460195 -   -19  -4.30719   GGTTTGGAGAATAAA      TAAAGCAGAACCTC TTGA GAGGTTCTGCTTTA       TTGTCAGTATGTATG 100 36
GII78_RS18150 3459209 .. 3459227 - -10.3  -5.48787   ACAATATATAAAAAA             CCTCTCC TGTTG GGAGAGG             TTTAAAAGACACTGC 100 27
GII78_RS18145 NONE
GII78_RS18140 NONE
GII78_RS18135 3457736 .. 3457756 -  -6.9  -5.67063   CGCACGATAAAAAAA            CAGAGAC TTATACC GTCTCTG            CTTCATTACATCAGT 100 62
GII78_RS18130 3455681 .. 3455696 -  -4.8  -4.66625   ATAGAGACAAAGAAA              TTTACT TTCA AGTAAA               ACATCTCGAATTAAA  71 43
GII78_RS18125 3454907 .. 3454938 - -13.1  -4.30576   GCTGGAGCACTAAAA      CAAAAGCCTCCCC AAATAA GGGGAGGCTTTTT       CATTAGAATGTTTTT 100 28
        csoR 3453364 .. 3453374 -  -4.6  -2.79796   TTTCATCCTACCATA                 CCCC CGT AGGG                 TATTACAATAAAAAA  48 46
        copZ 3453077 .. 3453102 - -14.1  -4.71307   TAAAAATGAAAGAAA         TATCGCGCCTC CCTA AAGGCGCGATA          CCTTGAATCACTCAG 100 33
GII78_RS18105 3450593 .. 3450619 -  -9.5  -4.86621   AGTGTCAATGAAAAA         CAAAAACCGGC ATATA GCCGGTTTTTC         ATTTTACTTTTTGCA 100 24
        cadA 3448262 .. 3448287 -  -9.8  -5.46698   TTTAAAATTAAAAAA         GAAGCGGATC GCAATT GATCCACTTC          TTTATTTTAACAAGA 100 88
        bdbD NONE
GII78_RS18090 3447112 .. 3447132 - -11.1  -5.37593   TGCGAAATTAAAAAA            GCGCCCG GCATACG CGGGCGC            TTTTTTTGTTATTCA 100 34
GII78_RS18085 3446314 .. 3446340 - -15.3  -4.46926   CAGGCTACCATAAAA         GAAACCTCTCC GTCAT GGAGAGGTTTC         TTTTATTTTACTGAC 100 33
        helD 3442906 .. 3442923 -  -9.9  -5.56264   TGTAAATAGAAAAAA             GAGAAGG ACTC CCTTCTC              TTCATTCAGCCATCT 100 27
GII78_RS18070 3440950 .. 3440960 -  -6.8   -2.7709   AATCAATATACATCA                 CGCT GAT AGCG                 TTTTTGCTGCTGCAT  58 2
        cysI 3439158 .. 3439182 - -15.1  -5.43487   AAATTACAGAAAAAA          GAGACAGGAAG CTA CTCCCTGTCTC          TCATCTTTCTTTCTC 100 39
GII78_RS18060 3436896 .. 3436915 - -11.4  -5.80817   CTTAATATAAAAAAA            GCTGGCGC TCTA ACGCCAGC             TTTTTTGCTGCATTT 100 39
        pgoN 3435309 .. 3435351 -  -7.8  -5.80817   TTCAACAGAAAAAAA CGCACTAAAAAAACTCCCCG TAA CGGGGAGTTTTTTGATTAAA ACAGAAGCTCATCAG 100 21
GII78_RS18035 3432811 .. 3432828 -  -9.9   -5.7946   TTCCGAATAAAAAAA             TCCCTCT ATCA AGAGGGA              TTTTTTACGTTTCCA 100 30
        sspJ 3430031 .. 3430057 -   -16  -4.28375   GGAACAGATGGAAAA         TACGGATAGAGC CAA GCTCTATCCGCA         TGTGGTTATCGATTA 100 31
GII78_RS18015 3428225 .. 3428247 - -12.1  -5.26316   TGATTTTATAAAAAA           GACACCTGA GCAAA TCAGGTGTC           TTTTCATTATGCTTG 100 32
GII78_RS18005 NONE
GII78_RS18000 3424787 .. 3424798 -    -3  -2.57132   TGTTCCGTTGATAAT                GAAT TCAT ATTC                 GGCCCCCTCCTCTAA  41 37
GII78_RS17995 3423961 .. 3423979 -   -11  -6.09888   GCCGAATAAAAAAAA             TCCCGGCT TCG AACCGGGA             TTTTTTCATACAGTA 100 31
GII78_RS17990 NONE
GII78_RS17985 NONE
GII78_RS17980 3420698 .. 3420722 -  -9.4  -5.47218   TCCCAGCTAAAAAAA         GAACGCATTCC AATT GGA-TGCGTTC          TTTTTATTCATAGCG 100 29
        sigO NONE
        rsoA 3417772 .. 3417789 -  -4.8  -5.36314   CAAAACAGCAAAAAA             GGAGCA AACAAG CGCTCC              CTTTTGATGTTTTTT  84 53
        yvrH NONE
        yvrG NONE
GII78_RS17940 3414236 .. 3414256 - -12.6   -5.9873   GTAGTATAAAAAAAA            CGCATCCG TGTTT CGGATGCG            TTTTTTTTATACGTC 100 32
GII78_RS17930 NONE
GII78_RS17925 NONE
GII78_RS17920 NONE
GII78_RS17915 3409094 .. 3409119 - -12.6  -5.63236   AGTGAAAAACAAAAA         GCCGGCATGT ATTTGA ACACGCCGGC          TTTCGTTTTCACTTT 100 47
GII78_RS17910 3407659 .. 3407679 - -12.6  -5.61596   ATCGGCACAAAAAAA            CGCCATGC ACGAG GCATGGCG            TTTTAAAACCCTTTA 100 38
        liaI NONE
GII78_RS17900 3406415 .. 3406432 -  -6.3  -3.17194   ACGTGCGGAAGGGAA             GGACTTG ACCG CAAATCC              TTCCCCGTTCCGCTT  58 39
GII78_RS17895 NONE
        liaF NONE
        liaS NONE
        liaR 3402987 .. 3402999 -  -4.1  -2.88544   TGTGATTGTCAGAGA                CTTCG GAA CGAAA                GGCGCAAACAAATAG  46 48
GII78_RS17860 NONE
        fumC 3397587 .. 3397613 - -19.6  -3.42583   GCAACATATTTAGAA         GAACGGCTGCTT AAA AAGCAGCCGTTC         TTTCTTTCTATTACG 100 36
GII78_RS17845 3395874 .. 3395884 -  -2.6  -5.61596   AGCTGGAGAAAAAAA                 TAAA GGA TTTA                 TTATATTTAACGAAG  89 518
        htrB 3392629 .. 3392651 - -13.5  -5.67063   CTTAGGATAAAAAAA           GCTGAACCC TATTT GGGTTCAGC           TTTTTGTTTTTTTCT 100 40
GII78_RS17815 3389269 .. 3389291 - -11.2  -4.82333   AGAAGAATTGAAAAA           GCCGGGGCAT TTA ACGCCACGGC           TTTTTCTTTAAGATT 100 33
GII78_RS17810 3388683 .. 3388697 -  -3.6  -2.90028   TGTAGCAGAAAACAC               TGACTT TGA AAATCA               TTTTCAATTAGTTTT  46 80
GII78_RS17805 3387664 .. 3387700 - -14.7  -5.00616   TTCCTTTCGAAAAAA   CAGC-AAGGAGCTTTC TCAATT GAAAGCTCCTTCGCTG    CGTTATTTATCCATG 100 32
GII78_RS17800 3387362 .. 3387387 -  -9.8  -5.37345   CTGAATCACAAAAAA         GCAGTCTGCT ATAATG AACAGACTGC          TTTTTGGCTATTGTT 100 33
GII78_RS17790 NONE
GII78_RS17785 3385184 .. 3385207 - -13.8  -2.77148   CCCATTAATAGAGCA          CCCCGCGGGT ATCA ATCCGCGGGG           TTTTTTATTCAATCA 100 30
GII78_RS17760 3381312 .. 3381332 -  -8.2  -2.76171   TGGAACAATCATAAT            GCAGCTGC TTCCC GCGGCTGC            TTTCACTTTTTCAAA  66 28
GII78_RS17750 NONE
GII78_RS17745 NONE
        fadE 3375605 .. 3375626 - -15.9  -5.00616   GTGCTTCTTAAAAAA           GAGCTCCGC GCAT GCGGAGCTC            ATGGCCAATCAGACA 100 34
GII78_RS17735 NONE
        gcvH 3374662 .. 3374679 -  -2.7  -2.64155   GTTTGTCGAAAGCCA             TATTGGA CACC TCCCATA              ACGTTAGCGTGTCCA  41 64
GII78_RS17725 NONE
GII78_RS17720 NONE
GII78_RS17715 3373635 .. 3373645 -    -4   -2.9652   TTATAAAACGAACGA                 CAAT TTC ATTG                 GATATGCTGAGAAAT  47 44
GII78_RS17710 3372947 .. 3372974 - -14.2  -5.07652   TTCTGCAAAAGAAAA        GCCTTTCTGCAC ACTT GAGCAGAAAGGC         TTATATAAAATGCCT 100 264
GII78_RS17705 NONE
        metP NONE
        metQ 3370333 .. 3370353 - -12.6  -5.10077   AAATACGCGAAAAAA            CCCCGGAT TTCTC ATCCGGGG            TTTCAGTCTTATTCA 100 34
GII78_RS17690 3369848 .. 3369863 -    -4  -2.85668   TAGCGGCAGATGAGA              CGAAAG CATC CTTTCA               GAACAAATGAGAATG  46 63
GII78_RS17685 3369533 .. 3369548 -  -6.8  -5.63236   ATTGAAAAAGAAAAA              GAGTGG ATTC CCACCC               TTTTTTAAAAGATTG  93 47
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB 3364155 .. 3364183 - -12.6  -4.17316   ATGTGTCGAAAATAA        GAAAAACCCTCG ATAAA CAAGGGTTTTTC        GTTAGTTATCCAATA  95 31
GII78_RS17645 3361284 .. 3361294 -  -3.2  -5.24647   ATACAGAAAAGAAAA                 GCTA GAA CAGC                 TTTATTATATTTGTT  73 58
GII78_RS17640 3360798 .. 3360822 - -10.8  -4.55128   ATGCCCAAATCAAAA          GCCAGAACTT GACTT AAGCTCTGGC          TCGCTGTTCAATCCG  95 53
GII78_RS17635 3359593 .. 3359620 -   -13  -2.62184   CTCCTCTGGACATTA        GACTATAATGTT ATAT AACATTATAGTC         TAATGCATAATGGTT  85 54
GII78_RS17630 3358268 .. 3358293 -  -7.7  -4.82901   TCTCCTTTATAAAAA         GAAAAGGTG CGAAGCTT CACCTTTTC          TTTGATTTATTCAGC  88 32
GII78_RS17625 NONE
GII78_RS17620 NONE
GII78_RS17615 3355198 .. 3355223 -  -2.5  -3.66666   CCGAAAAGCTTCAAA         TCCAACCCGAG AGCC CTGTGGTTGAA          TTAAAACGGATTTTA  50 392
        ugpC 3353525 .. 3353546 - -14.5  -5.06414   TGGCCGTAAGAAAAA           GGTGCTCCT TTTG AGGAGCACC            TTTTTCTAATACACA 100 31
        allC NONE
        pucG 3349696 .. 3349715 - -13.6  -4.61231   TCATATCGTTAAAAA            GCTTGCGG AGTT CCGCAAGC             TTTTCTTTACACCGC 100 32
GII78_RS17580 NONE
        pucB NONE
        pucC NONE
        pucD NONE
        pucE 3344298 .. 3344319 - -14.5  -5.05782   ACTGAGGCTAAAAAA           GTCCGGCTT TTAA AAGCCGGAC            TCCCGTCTACCCCCG 100 13
GII78_RS17525 3335789 .. 3335810 - -14.4  -5.40004   GAGGAAATCAAAAAA           CCCGGCGG TAAAAT CCGCCGGG            CTTACGAAGGAACGA 100 27
GII78_RS17520 NONE
GII78_RS17515 3334490 .. 3334503 -  -2.3  -4.64861   CTTTTCTAAAATAAA               TCGAG CTGT CTCGG                AGCAAGTCCGCTGTA  61 2
GII78_RS17510 NONE
GII78_RS17505 3332177 .. 3332209 -  -2.1  -2.74012   TTACCACGTCAACCA     CTCCCTTCATTCAT CACTTT ATG-ATGAAGGGCA      CAGCTTGTTGTGGGC  40 49
GII78_RS17500 3331796 .. 3331835 - -10.2  -4.63486   ATCTTGGCAAGAAAA  TCCCCCCTTACATATCACA ATG TATGCT-TGTAAGAGGGGA  CATAGTAATAGCCGG  91 53
        yunB 3331005 .. 3331025 - -11.1  -4.85618   AAAGAAGTAACAAAA            GCCGCCTCT TCA ACAGGCGGC            TTATTTGCTGCTTTT 100 26
        lipA 3328857 .. 3328885 - -14.7  -2.82291   AATCGATAGGAATGA        CAAAAACGCCAGA TGA TCTGGCGTTTTGG        CATTATGCTTGTGCT 100 28
GII78_RS17475 NONE
GII78_RS17470 NONE
        nucF 3326568 .. 3326588 - -14.7  -3.92996   CGGCATACAGAATAA            GGGCACCCT TTT AGGGCGCCC            TTTTTTCAAATGTAT 100 31
       cotNH 3324803 .. 3324815 -  -4.8  -3.21276   CCTGTTTTGACAAGA                CAGC ATTAG GCTG                AATTTTGCGAATGTA  53 105
GII78_RS17450 NONE
GII78_RS17445 NONE
GII78_RS17440 3321372 .. 3321398 -  -6.5  -5.86061   CTCCAGCAAAAAAAA        GCGC-CCTCCGC TGAC GCTGAGGAACGC         TTGGCATGATCTATA  93 36
GII78_RS17435 3319293 .. 3319319 - -12.3  -3.10244   TCTTTTAATAAAGCA         GCCAGGCGGAT ATTTG ATCAGCCTGGC         TTTTTTTATTAGAGA  85 34
GII78_RS17425 3318512 .. 3318530 - -10.3   -3.9467   AATGATAGAGAAGAA             CCGCTGA TCAAG TCAGCGG             TTTTCTGTATACCCA  88 19
GII78_RS17415 3316910 .. 3316925 -  -8.2  -5.79595   CGGCAAAATAAAAAA              GGGCCC GTCC AGGCCC               TTTTCTTTAAAACAT 100 32
GII78_RS17410 3315543 .. 3315576 - -17.7  -2.87132   CCCGTTTTTCATACA     TAAAAGCTCCTTGCA CTGA CGCAAGGAGCTTTTA      TCGTTTATATAAACA 100 30
GII78_RS17405 NONE
GII78_RS17400 3314096 .. 3314132 -   -11  -5.18726   TCCCCATAATAAAAA    CGCCTCCCTTAACGAT GATTT ATCGCTAAGAAAAGCG    TCAGTAATAGTTGCT 100 56
        paiA NONE
        paiB 3312596 .. 3312628 - -18.6  -5.71983   TTAATCATAAAAAAA     CGCCAAGTC-AGCGG TTCT CCGCTTGACTTGGCG      TTTTCTGCTACTTCT 100 55
GII78_RS17380 3311155 .. 3311180 - -12.7  -6.32017   AATAAATAAAAAAAA         GGAGCTTGTGTC TGC GACACA-GCTCC         TTTTTTATTTGAAGA 100 30
GII78_RS17370 3308581 .. 3308594 -  -9.5  -5.09762   TTTTAATAAAGAAAA               CCCGC TTCC GCGGG                TTTTTAGAAAAACTT 100 29
GII78_RS17365 3308229 .. 3308278 -  -5.9  -2.65521   GGCAGACTAATCAAC CTATTCCACCCCCCTGCGTT GTTTTTAGTGT AACGC-GGGGGCTGAAATAA AGTCAACGGCTGGAA  54 28
GII78_RS17360 3307883 .. 3307901 - -10.4  -5.66684   GAACGCATAAAAAAA             GCTTTCTT TAG AAGAAAGC             GGCATTTAAAACATT 100 31
        spsC 3307123 .. 3307144 - -11.5  -5.81412   TTCATGTAAAAAAAA           CGCTCCTGC TTTC GCTGGAGCG            TTTTATTCTTTCACA 100 28
GII78_RS17345 3304948 .. 3304972 - -12.9   -5.4505   TTTCGGAAGAAAAAA          TCCCTGCCGCA TCA TACAGCAGGGA          TTTTTCATTACTCGT 100 33
GII78_RS17340 3303477 .. 3303498 -   -13  -4.59069   ATCATAACGAGAAAA           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 32
GII78_RS17330 3302046 .. 3302069 -  -5.4   -5.4505   TTCCCGAATAAAAAA          GGCACCTTGAT CAA AT-AAGGTACC          TGCAGACTATCAATA  88 92
        besA 3301040 .. 3301058 - -10.3  -3.27525   TTTTTTTAAAGGCAA             GGCTGAG TATGT CTCAGCC             CATTGATAGATGCGG  79 20
GII78_RS17320 NONE
        dhbC NONE
GII78_RS17310 NONE
GII78_RS17305 3296249 .. 3296261 -  -2.6   -3.0353   CCTTTTATAAATAAT                CCGC GTTTG GCAG                CACTTGCTGGCTGCG  43 2
        dhbF NONE
GII78_RS17295 3288826 .. 3288846 - -11.2  -5.10064   CGTAAGATAGAAAAA            GAGACTGC GGCGA GCAGTCTC            TTTTTGATACGATTA 100 38
GII78_RS17275 3284653 .. 3284690 -  -9.1  -2.88861   GATCACCCTTACATA   GAAAGAGCGCCGTCTTC TTTT GAATCAGGCGCTCCTTC    CCTTTCATACTGTTA  69 38
        yukD NONE
        essB 3282984 .. 3282994 -  -2.4  -2.85985   ATAATAGACTCAAAT                 GGCG AAC CCCC                 TTACGGCCGAATGGC  41 73
        essC NONE
        esaA 3275215 .. 3275251 -   -11  -3.16088   AGAGGGTATGAAAAG    GGAAAAGGAGAGCATA CAAAT CATGATCCCCTTTTCC    ATGCTGCGATCACGC  80 35
        essA 3274705 .. 3274718 -  -3.1  -4.08706   CGGTGATGATATAAA               GTTCC ATTG GAAAC                CTCCTTTTCCGTTAT  57 81
GII78_RS17245 3273962 .. 3273980 -  -8.9  -5.93809   TTTGTATAAAAAAAA             GAGCAGA AAATA TCTGCTC             TACAAAAACTCTTTA 100 25
GII78_RS17240 3273134 .. 3273145 -  -5.8  -2.97245   TTATGGATAATGACA                CAGG CTTA CCTG                 ATAAAACAAAGGGGT  56 132
GII78_RS17235 3272796 .. 3272818 -  -2.7  -4.74103   CGCTTAACTGAAAAA          TAGGACGTCC CGGT GTACG-CCTA           TTTTTCATGCGCAAG  65 46
GII78_RS17225 NONE
GII78_RS17220 3270879 .. 3270907 - -13.3  -5.60689   TTATACAATAAAAAA        GCAACAGCCTCTT GTG AAAAGGCTGTTAC        CCGTTAAACGAAACT 100 22
GII78_RS17215 NONE
GII78_RS17210 3270092 .. 3270110 - -11.8   -5.1356   TGCCATGAACAAAAA             GACAAACG GTC CGTTTGTC             TCTTAAGATTTCAGC 100 28
GII78_RS17205 NONE
GII78_RS17200 3267933 .. 3267981 - -16.4  -3.29246   GAAAAATAATATATA CATAAAG-AAAACTGGCCCTTCG CGAA CGAAAGGCCAGTTTTTCTTTATT CTTCCTCAAGCTCTT 100 21
        pdeH 3266172 .. 3266195 -  -4.5   -4.7889   ACAAACACCGAAAAA          GACCGCAAC GCTAAA GTTGTGGCC           TTTTCGCTTTGTCAT  71 441
        degQ 3265646 .. 3265661 -  -7.6  -5.98781   TAGAACGAAAAAAAA              GACTTG TTTC CAAGTC               TTTTTCACGAAATTT 100 30
GII78_RS17175 NONE
        comX NONE
GII78_RS17165 3262029 .. 3262048 - -12.2  -5.26316   CCATTTTATAAAAAA            GACTTGGC CTGT GCCAAGTC             GTTTCCGTTATAAAT 100 44
        comA NONE
GII78_RS17155 3260912 .. 3260937 -  -7.6  -3.31603   ATTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG  67 31
GII78_RS17115 3254661 .. 3254683 -  -9.2  -4.40003   CTTCATAAACAGAAA           GAGTTCCG TTTTATG CGGAACTC           TTTTTTTATTTATTC  91 31
GII78_RS17075 3244947 .. 3244974 - -17.2  -3.64682   CACCAAACGCTGAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 6
GII78_RS17055 3240997 .. 3241008 -    -3  -2.56122   TCCGATCAGAAAATG                CTAT CTTT ATAG                 TATATCAATTCCCCT  41 54
        kapD 3239841 .. 3239854 -  -2.3  -4.58663   AGCAGCTTCCAAAAA               GGCAC TACG GTGAC                CATTAAGCTTCCCGC  61 515
GII78_RS17030 3236933 .. 3236965 - -15.2  -3.16564   TGCTGATTTTATCAA      TTAAAAAAACCGGT GCTGA ACCGGTTTTTTTAA      GGCGTGCAGGAGCTG 100 22
GII78_RS17020 NONE
GII78_RS17015 3234227 .. 3234268 -  -3.7  -4.81551   TATGCACAGCAAAAA GGGGGTAAACTGAAAATACC AAA GGCTTTCT-AGTATTCCCCC CTTTTATTGGATGCG  69 63
        yugI 3233677 .. 3233700 - -13.2  -4.58773   TGCATGAAATCAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTTCATGCTTAT 100 37
GII78_RS17000 3231973 .. 3231998 -  -9.7   -5.8096   GACAAAAAAGAAAAA         GGGAAGCAGCC AAAC GGCTATTTCCC          CTTTTTTTATAGTGA 100 32
GII78_RS16995 3230698 .. 3230721 - -12.5   -4.4846   CAAGTCAAGAAGAAA          GGGCGGAAT GACTGG ATTCCGCCC           TTTGGGTTTATAGAG 100 33
GII78_RS16990 3229232 .. 3229255 - -12.4  -4.85599   CTGATTTTATAAAAA          GCCGACCGGC AAAT GCCAGTCAGC           TTTCTCACATTAATC 100 35
GII78_RS16985 NONE
GII78_RS16980 3228304 .. 3228327 -  -6.7  -5.61596   AGGCGTACAAAAAAA          GGAGGGG CCGATGCTTT CCCCTCC           TCTTACATACAAGGT 100 68
GII78_RS16965 NONE
GII78_RS16960 3225991 .. 3226014 -  -9.6  -5.73672   AAATAAGCAAAAAAA          GCCCTTACCA TAAA TGGTAAGGGG           CCACCTCCTTAACGT 100 40
GII78_RS16955 3224668 .. 3224688 -  -5.4  -5.39721   TGATGACACAAAAAA            CAGCCG TTCGTTCCC CGGCTG            TTTTTTATTAAAAAT  86 33
GII78_RS16950 3222885 .. 3222903 -  -8.8  -6.14618   GATAAAACAAAAAAA             CTCCAGTC TAA GGCTGGAG             TTTAGCACCATAGAT 100 27
GII78_RS16945 NONE
GII78_RS16940 3222305 .. 3222315 -  -2.4  -3.89346   CCTTCATTCGATAAA                 GCGG CAG CCGG                 GGCGGGTGTGACAAG  51 97
GII78_RS16935 3221866 .. 3221896 -  -6.1  -4.56775   ATCGTCCGCTAAAAA       GCCCCATCGCC TATTTTCCG GACGATGGGGT       TTCAAATGCCTTTCG  76 5
        mcpB 3218949 .. 3218967 - -10.3  -5.74122   TACCATATAAAAAAA             CAGCGCT TTGAT AGCGCTG             TTTTTCGGTTTTTAC 100 37
        tlpA NONE
        mcpA 3214670 .. 3214694 - -11.5  -6.11019   AAAAACTAAAAAAAA          CACCCAAGC GCAACAA GCTTGGGTG          TTAAGGCTTATTATT 100 36
        tlpB 3212571 .. 3212594 - -11.8   -5.4505   GTTTTCAACAAAAAA          GAAAGCAGCA GATA TGCCGCTTTC           TTGTTTTATTAAGAT 100 34
GII78_RS16905 NONE
        rhaR NONE
        rhaB NONE
        rhaM NONE
        rhaA 3206435 .. 3206462 -  -9.9  -5.47399   TCAAGCTTAAAAAAA       TCCGCACGCGCGC AAAT GC-CGCG-GCGGA        TTTTTTATTAGACAA 100 33
GII78_RS16875 3204044 .. 3204056 -  -5.5  -3.48593   TATTTTTTTACATAA                CGGGA GCT TCCCA                TAAATGGAAAGCCCG  58 64
GII78_RS16870 3203142 .. 3203163 -  -8.8  -5.38951   AATTGACAGAAAAAA           TAAGGCTC GTAAAA GAGCCTTA            TTTTCGACTTACATC 100 34
GII78_RS16865 3202966 .. 3202982 -  -9.5  -6.09196   CTCAAAACAAAAAAA              CCCTTAT AGA ATAAGGG              TTTAAAGGTATGGAG 100 34
GII78_RS16855 3200322 .. 3200354 - -10.9  -4.23434   GAAAAGATTGCAAAA      TAAAAACCTTTTC GCTCAAT GAAAAGGTTTTTA      CCATGTTTCTATTTT  90 34
        lytG NONE
GII78_RS16845 3198957 .. 3198976 - -10.7  -5.58454   GTGATATCAAAAAAA            TCCGGCG TGCAGT CGCCGGA             TTTTTTTATGATTCG 100 31
        betB NONE
        gbsB 3192358 .. 3192380 - -10.6  -5.06451   CATTATCCCAAAAAA           TCCCGCTC TGTAAAG GAGCGGGA           TTTTGATTATACCGT 100 32
GII78_RS16810 3191695 .. 3191740 - -16.5  -4.28115   ATGAAAGAAATTAAA GAAAAGATAGAAAGGGCCTGAT TTA ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTTCGCT 100 6
GII78_RS16800 NONE
        floT NONE
GII78_RS16790 3188407 .. 3188444 - -14.3  -4.26189   TGACAAAGCGTAAAA   GTAACAATCCCCCAGCGA ATT CCGCTGGGGGATTTTT-C   GTTATCTGTTAAGAA 100 27
GII78_RS16780 3185519 .. 3185544 - -11.3  -2.72371   GTTTTCAAAGAACAC         GTTTCGAAGGA ATGA TCCTTCAAAAC          TAAACAAGACAGGGA  78 88
GII78_RS16775 3182461 .. 3182478 -  -8.5  -4.49556   TCGCCACCAAACAAA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGGT  86 55
         rrf NONE
GII78_RS16765 NONE
GII78_RS16760 3182119 .. 3182131 -  -3.5  -3.09648   CAAGAGACTTGAATA                TTATA TCA TATAA                AAGTGGTGCCGGCAA  45 29
GII78_RS16755 NONE
GII78_RS16750 3181910 .. 3181938 -  -4.5  -3.09516   TGTTCTACCACTGAA        CTACTTCCGCA GAAATGG TGCGGATGAAG        GGACTTGAACCCCCA  50 12
GII78_RS16745 NONE
GII78_RS16740 3181745 .. 3181755 -  -2.4  -3.36823   GGGCGCAAAACTTAA                 TGCC GAG GGCC                 GGACTTGAACCGGCA  45 15
GII78_RS16735 NONE
GII78_RS16730 NONE
GII78_RS16725 NONE
GII78_RS16720 NONE
GII78_RS16715 NONE
GII78_RS16710 NONE
GII78_RS16705 NONE
GII78_RS16700 NONE
GII78_RS16695 NONE
GII78_RS16690 3180835 .. 3180858 -  -2.4  -2.98493   TTTACCACTAAACTA          CACCCGCAATT TTT ATTTG-GGGCG          ATTGATGGGAATCGA  42 19
GII78_RS16685 NONE
GII78_RS16680 NONE
GII78_RS16675 NONE
GII78_RS16670 3180510 .. 3180522 -  -3.3   -2.8294   TATGGCGGAGAAGGA                GGGAT TTG AACCC                TCGCGCCGCTTACAC  44 0
GII78_RS16665 3180373 .. 3180391 -  -8.9  -6.14618   TAGAAAACAAAAAAA             CCTTGCA GGATA TGCAAGG             CTTCTGGATGACCCG 100 31
        glgB NONE
GII78_RS16655 NONE
        glgD NONE
        glgA NONE
        glgP 3172236 .. 3172252 -  -9.4   -5.7946   CTGTGAACAAAAAAA              GCCGCT TATAC AGCGGC              TTTTTCACATCATCG 100 30
       cotSA NONE
        cotS NONE
GII78_RS16615 3167765 .. 3167786 -  -7.4  -5.30189   GAGAACATGAAAAAA           GGCATAAA TATGAC TTTATGCC            TTGCGCTTTACGGTT  95 19
GII78_RS16595 3163250 .. 3163266 -  -7.9  -3.06183   TCCACGCTGATTGAA              CCCCCGA TTA TTGGGGG              TTCTTTTCCGTTTTC  65 16
GII78_RS16585 NONE
        menD NONE
        menH NONE
        menB 3157374 .. 3157400 -  -8.1  -5.10933   GTATTGAAAAGAAAA        CAGCTTG-GACC GCAA AGTCTCAAGCTG         TTGGTTTACTAGGTA 100 48
        menE NONE
        menC 3154655 .. 3154674 - -10.7  -5.72616   ATTTACATAAAAAAA            CCGGCTG GGTCAG CAGCCGG             TCCAAACGAGAAGGG 100 111
        mntA NONE
        mntB NONE
        mntC NONE
        mntD 3150587 .. 3150613 -   -11  -4.41494   GATTTGTAATTAAAA         GAAAGAGCTG CATCAGC CAGCTCTTTC         TTTTTGCATGTTGAG  95 11
GII78_RS16520 3147480 .. 3147499 -  -4.2  -5.88565   GTCATAATAAAAAAA            GACAAACC CTCA GGCCTGCC             TTATTTCCCCATGTT  91 26
GII78_RS16515 3146731 .. 3146751 -  -5.5  -2.57192   ATGGAATCGAAGCGA            TTAAAACAC ATG GCGCTTTAA            AAGGCGGATGGCTGA  50 117
GII78_RS16505 3145980 .. 3146007 - -12.9  -5.26918   AGACGTCACAAAAAA        GACCTTTTTGC TTATGC GCAAAAAGGTC         CTTTCTATTTTAGCC 100 35
GII78_RS16500 3145437 .. 3145455 -  -2.4  -3.42699   ATTGATCCACCACAA             GAAAATCA CTC TGATTCAC             ACAATCAATGATGAT  45 30
GII78_RS16490 3144716 .. 3144743 - -16.4  -5.38839   GATACAAAAAGAAAA        GCCGGACGTCTT TTTT AAGACATCCGGC         AGTTCTATTTTTGAA 100 42
GII78_RS16485 3144142 .. 3144156 -  -2.7  -3.53224   TACTTTTGCCGGAAA               GTGCG ACCGA CGCTC               TGGGCTTTATTATGA  48 59
        ytkD 3143484 .. 3143501 - -12.7  -5.39721   GGAGGACATAAAAAA             CCCGGCA TATG TGCCGGG              TTTTTTTATTCAATC 100 31
GII78_RS16460 NONE
GII78_RS16455 3139645 .. 3139668 - -15.4  -5.49579   GTATAAAAAACAAAA          GCCAAGAGCA ATTA TGCTCTTGGC           TTGTTTTAATTGACG 100 31
        metK 3136319 .. 3136339 - -11.2  -4.08285   GATAAAAAAGGGAAA            GCCGCTTA ACCAG TAAGCGGC            TATAAAATTATTCTC  89 33
        asnB 3134255 .. 3134299 -  -8.8   -5.0065   GATGGAGAAATAAAA GGATAACAACAAGGCTTTCGA CTAC TCGAAAGCCTTGTTGTC-TGT TACACAAAGATGACT 100 25
GII78_RS16435 3132743 .. 3132771 - -12.6  -2.96216   TTCTATGAGCACACA        CAAAAAGAGCCC ACTGG GAGCTCTTTTTG        TCAGCTGATATTTCG  88 26
        ytpA NONE
        tbcS 3130051 .. 3130075 -  -7.2  -5.81412   GCCATCGAAAAAAAA          GCTCAGATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAGTT 100 8
GII78_RS16405 3128058 .. 3128079 - -14.5  -5.60993   TTTTTTACAAAAAAA           CGGACCCTT TTAA AAGGGTCCG            TTTTCCTACACATCA 100 31
GII78_RS16400 NONE
GII78_RS16395 NONE
GII78_RS16390 NONE
GII78_RS16385 NONE
GII78_RS16380 NONE
GII78_RS16375 NONE
        ytrF 3122471 .. 3122489 -   -16  -4.96848   TGTGCTATAGAAAAA             GCCGGCTG TCT CAGCCGGC             TCGTTCACATTATAG 100 35
        bceR 3121704 .. 3121719 -  -2.6  -2.66274   CTTTCGATAAGGAAT              GCTTTA ATCA TAAAAC               TTGTCCTCTTCCTTC  41 13
        bceS 3120694 .. 3120717 -  -9.6  -5.55001   GAACAAAAAAGAAAA          GCATGTGACA TTTT CGTCACACGC           TTATGACATGTTCAA 100 18
        bceA NONE
        bceB 3117888 .. 3117906 - -13.2   -5.4182   AACGATAAACAAAAA             GCTCCAGA ATG TCTGGAGC             TTTTTCTGTTTCACA 100 36
GII78_RS16340 3115724 .. 3115746 - -10.6  -4.68593   CCGATTATGTAAAAA           GATCCCGC TCATCCG GCGGGATC           TTTTATTATGAAGAG  95 31
GII78_RS16330 3113866 .. 3113894 - -10.3  -6.02546   CCAAACTAAAAAAAA        CTCCCTCATCCCT AAA AGGGACGAGAGAC        TTTCGTTTTCCCGCG 100 327
        leuS 3111325 .. 3111344 - -10.8  -5.17353   AGACTGATGAAAAAA            TCCCCTTT TGGC AAAGGGGA             TTTTTTCTAGGCTTA 100 38
GII78_RS16320 3110913 .. 3110934 - -10.2   -5.4659   GAATACAAATAAAAA           CTAGGGGA CCGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 22
GII78_RS16290 3104350 .. 3104372 - -10.7  -5.43974   AAAAGGAAACAAAAA           GACCGTTTT CACAC AAAACGGTC           TTTTTCGATTTCTTT 100 47
        bioW 3103409 .. 3103419 -  -5.4  -2.83403   TTTTTTCTATCAAAT                 CATG AGT CATG                 GTCTTCCTCCCACTC  52 14
        bioA NONE
        bioF NONE
        bioD NONE
        bioB 3099169 .. 3099201 - -13.7  -4.56597   CTTTCTGTTCAAAAA      TAAAAGCAATCGACA TCA TACCGATTGCTTTTA      TTGATTCTTTCAGCT 100 35
        bioI NONE
GII78_RS16255 3097096 .. 3097124 -    -9  -5.64321   ATAACAAAAGAAAAA        GAGCATAATCTT AGAAA ATGATTATGCTC        CGTTCTCCTCCTCGT 100 18
GII78_RS16250 NONE
GII78_RS16245 3094492 .. 3094516 -  -9.4  -5.12617   GAAGCATGTAAAAAA         CCCAAAACCGC TTGC GCG-TTTTGGG          TTTTTCCAACATTAT 100 37
GII78_RS16235 NONE
        rmgQ NONE
GII78_RS16225 NONE
GII78_RS16220 NONE
GII78_RS16215 3087333 .. 3087344 -  -4.4  -2.56596   TTCTCTATCAATCTA                TTCC GTTT GGAA                 CAGCGTTATGATAGA  47 51
GII78_RS16210 3087091 .. 3087116 - -16.3   -5.5353   CATATTAACAAAAAA         GATCTTTCCGC GCCT GCGGAAAGATC          TTTTTATTTGCGATA 100 29
        murJ 3082215 .. 3082231 - -10.1  -4.77173   CCTTTATAAAAGAAA              GCCCGCA GCA TGCGAGC              CCTCAGTTTCATCAT 100 51
GII78_RS16190 3081442 .. 3081462 - -12.6  -4.99043   TGCTTATAAATAAAA            CCCCGCAT TCGAT ATGCGGGG            TTTTTGTCATGCTTG 100 32
GII78_RS16180 NONE
GII78_RS16175 3078947 .. 3078966 - -12.2  -5.04597   ATGCATACAGAAAAA            CCCAAACG TCGC CGTTTGGG             TTTTTTATGTAAACA 100 30
        pepV 3076118 .. 3076143 - -13.3  -5.47821   ATTTATTTAAAAAAA         GGACTGGCTTC AGCA GAAGCCGGTCC          TTTTATTTTGCAAGC 100 28
        thpR NONE
GII78_RS16150 NONE
GII78_RS16145 NONE
        pulA 3070305 .. 3070344 -  -2.3  -5.98675   TATAAAAATAAAAAA  GACAGCTATTGA-GAG TCTCATATG CTAATCAATAGCCGTC  CTTTAAATTTTAGCG  87 58
GII78_RS16135 3069025 .. 3069049 -  -3.5    -5.626   GAGCGCATAAAAAAA          GAGGGTCCC GTCTGCT GGAACACTC          CTTTCACATGTATAA  84 376
        trmB 3068250 .. 3068269 -  -8.6  -5.93809   GGCCCATAAAAAAAA            CAGACTCC TGTC AGAGTCTG             TCTTTACGTTCTCCA 100 29
GII78_RS16120 3067346 .. 3067357 -    -3  -3.61922   AACATGCAGGGTAAA                CATA AAAA TATG                 CTATTGCTTCATTCG  48 26
        maeA 3065541 .. 3065569 -  -9.6  -5.32944   CGGACAAGCAAAAAA       TAGAAGCCGCTGC CTAC GCAGCGGCT-CTT        TTTTATTATATCGCG 100 31
GII78_RS16105 3063926 .. 3063961 -  -4.7  -5.68489   CAGAATAAGAAAAAA    GCTTGTCGATCCGGGC TTACT GCTCGT-TCAACAAGC    TTTTATGAAACCTAC  88 37
GII78_RS16095 NONE
GII78_RS16090 NONE
GII78_RS16085 3062079 .. 3062093 -  -2.2  -2.59323   AAAAGCGTTCATAAG               TAAAAA TCC TTTCTA               ATCCTTTTTCGGACG  40 23
GII78_RS16080 3061406 .. 3061429 - -13.2  -4.59944   ATCAGCAGAAACAAA          GCCGCTAAAC AAGG GCTTAGCGGC           TTTTCACATGATTCG 100 66
        sftA 3058293 .. 3058307 -  -3.4  -4.07568   CGCGGCGGCTGAAAA               GCCTCC CTT AGCGGC               GTATTTTATATGTTT  57 182
GII78_RS16070 3056888 .. 3056915 - -14.4  -4.08706   TTCCCATCAGATAAA        TAAAAAGCAGTG AGAT CACTGCTTTTTA         TTATGCCATGACGTT 100 26
GII78_RS16065 NONE
GII78_RS16060 NONE
        ytxJ 3055468 .. 3055489 -  -9.5  -6.22802   TTTTACAAAAAAAAA           GCG-CCAGAT GAT ATCTGGACGC           TTTTTTCTATGACAA 100 32
        aroF 3054152 .. 3054167 - -11.8  -5.75599   GAAAGCATAAAAAAA              GGCCGC AGGC GCGGCC               TTTTGGATTGTTCAA 100 41
        ccpA 3052861 .. 3052890 -  -5.8  -5.14563   CTCCCCATGAAAAAA       GCAAGAATTCACC ATAAA GGTGAAG-CTTGC       TCTTTGTTTTTCTTA  83 38
        motP NONE
        motB 3051298 .. 3051317 -  -6.4  -5.46129   GAACAAAGTAAAAAA            CGACCTTT ACGA AGAGGTCG             TTTTTGATTTTTTAA  93 12
        acsA 3046645 .. 3046670 - -15.5  -5.83211   GATTAAAATAAAAAA         CGCCCCTTCGT TTAC ACGAAGGGACG          ATTGATTATCGCGGT 100 307
GII78_RS16010 3045309 .. 3045336 - -14.3  -5.27335   TGCGGTAAACAAAAA        GATCCTTTGCC TTCAGT GGCAAAGGATC         TTTTTCTTATTTATA 100 32
GII78_RS16000 NONE
GII78_RS15995 3042397 .. 3042421 - -10.1  -4.70583   CGCAGTAATATAAAA          GCCCAAAAC TGATATC GTTTTGGGC          TTTTTTTATTTTATT  91 31
        refZ 3040761 .. 3040772 -  -5.8  -3.37487   GCATACCTTCAAAGA                GCTG ATTT CAGC                 CTGCGGAAGCATTGA  56 401
        ezrA 3038375 .. 3038396 -   -13  -3.52192   GTTAATGTCACAGAA           CGCCTGCG TTATTG CGCAGGCG            TTTTGTAATGAAAAA  95 89
GII78_RS15965 NONE
        thiI 3034412 .. 3034425 -  -5.3  -3.48276   CTTGTGTGTATAGAA               TGTGT CAAA ACACA                TGGCTTCATTCAGAA  58 78
GII78_RS15955 3034129 .. 3034150 - -15.9  -4.86862   TGTAAAAAATGAAAA           GGAGTGGGG ATAC CCCCACTCC            TAAGCCATTATGTGA 100 50
GII78_RS15950 NONE
GII78_RS15945 3030771 .. 3030800 - -18.1  -4.52589   CTTTTTTATAGAAAA       TAAAAGGACAGGC TGAT GCCTGTCCTTTTA        TGATTTCTCATATAC 100 23
        sppA NONE
GII78_RS15930 3028234 .. 3028259 - -11.9  -5.43866   CAATTCCTAAAAAAA         TAAACCCGGAC GGAG GTCCGGGTTTT          CGGTTATTTGCGGTA 100 29
GII78_RS15925 NONE
        ytfJ 3027008 .. 3027032 -   -13  -5.78622   TTATGCCAAAAAAAA          GTTAACTGCG GCCAT CGCAGTTAAC          CTTTTTTTAATAATT 100 32
GII78_RS15915 3026393 .. 3026413 -    -9  -5.14563   CTTGCCATGAAAAAA           GCTCC-GGC GGCA GCCTGGAGC            TTTTTTCCCTGCTTA 100 38
GII78_RS15910 NONE
GII78_RS15905 3025099 .. 3025111 -  -2.7  -3.25073   CGGTGAATATCAACA                TCTTC TCC GAAAA                ATATCTGACTTTTCC  45 115
GII78_RS15900 3023811 .. 3023830 - -10.8   -5.5112   TGCATCAACAAAAAA            GCACATTC AAGA GAATGTGC             TTTCATGCGATTTAT 100 37
GII78_RS15895 3023205 .. 3023227 - -11.4  -5.93809   CTTTTATAAAAAAAA           CTTCACCTAA ATT TCAGGTGAAG           TTTCATAGTATTTAT 100 45
GII78_RS15890 NONE
        argH NONE
GII78_RS15880 3020270 .. 3020287 -  -7.7  -5.71712   TGGCATACAAAAAAA             GCTGCCT GTAC AGACAGC              TTATTCTGCAGGAGA 100 26
GII78_RS15875 NONE
GII78_RS15870 3018613 .. 3018638 - -14.1  -5.75538   CTGAAAAAATAAAAA         CCACCTCCTGA TTCA TCAGGAGATGG          TTTCACGGTTTAAAG 100 35
        snaA 3016985 .. 3016998 -  -8.1  -2.62184   GGCTGCCTCACATCA               TGCCC AGCT GGGCA                CACCTAAAAGCATTG  65 9
        tcyJ NONE
        tcyK NONE
        tcyL NONE
        tcyM NONE
        tcyN NONE
GII78_RS15830 NONE
GII78_RS15825 NONE
GII78_RS15820 NONE
        ribR NONE
        sndA 3008424 .. 3008436 -    -2  -2.64225   GCAAAAACGATTAAT                TTCT TCATC AGAA                CACCCCATCTATATC  40 39
GII78_RS15805 3007438 .. 3007454 -    -8  -5.79595   CTGGAAAATAAAAAA              GAAGCC CGACC GGCTTC              TTACAGCGTTGATTT 100 100
GII78_RS15800 3005790 .. 3005801 -  -5.8  -3.57263   AGGCGTACGGGCAAA                GCCA TCTT TGGC                 AAAAGAAATATGTTC  59 258
GII78_RS15790 3004624 .. 3004646 -  -8.5  -3.41309   ACAGATGAACACTAA          GAG-AGAGGG TCTC CCCTCTACTC           GTGTTCTTTACATAA  70 20
        dnaE NONE
        maeB 2998583 .. 2998610 - -14.9  -3.36671   AGTTTAACTTGAGAA        CAGCGCGTCGG TCTCCG CCAACGCGCTG         CCATTTTTGGAATGA 100 48
        accD NONE
        accA 2996435 .. 2996462 - -12.2  -5.27923   GAATGTCACAAAAAA        TAAACGTG-AGCC AAA GGCTTCACGTTTA        TTTAGTTTACCCCGA 100 27
        pfkA NONE
         pyk 2993489 .. 2993506 - -11.3  -4.85822   ATGATAAAGAGAAAA             GGAAGGG ATTC CCCTTCC              ATTTTCACCTGTAAT 100 40
        fxsA 2993010 .. 2993045 - -10.5   -4.7254   ACCGTTCAGCAAAAA    TAAAACGGCAGCCGT TTTTTC ATGGCTGCCGTTTTT     TATTTGATGATGATC 100 25
GII78_RS15730 2991315 .. 2991330 -  -7.5  -6.02914   TGCATACAAAAAAAA              GCGGC TTTAAG GCCGC               TTTTTTTATGAAGTG 100 31
GII78_RS15725 2989757 .. 2989788 -  -5.5  -4.45083   TTCATATTTAGAAAA      CATTTTATTTTTCT TATAT AGA-AAATAAAATG      ATTTTTCCTAACATT  70 120
GII78_RS15720 NONE
         mdh 2987427 .. 2987456 -    -8  -4.81551   CATTTATAGTAAAAA       GAGAAAGGCT GTATTAAGCA AGCCTTTCTC        TCTTTTTATTAGGAT  88 34
        phoP NONE
        phoR 2984679 .. 2984705 -  -5.9  -5.48787   AGAAGACACAAAAAA        GGACGGGAAC ACAAATAG GTTCCCG-CC         GTCAAAATTGGCTCC  91 119
        polA NONE
        mutM NONE
        ytaF NONE
GII78_RS15685 2979622 .. 2979642 - -14.1    -5.055   TTAATGGCCAAAAAA            CACCGTTCA ATA TGAACGGTG            TTTTTTGTATTATGC 100 35
GII78_RS15670 2976959 .. 2976983 - -14.3  -4.99435   CGTAAGAACCAAAAA          GCAGCCAGCGC TCC GCACTGACTGC          CCTCATGCTTTATGA 100 35
GII78_RS15665 NONE
GII78_RS15660 2975080 .. 2975125 - -13.5  -5.35224   TTTATAAAAATAAAA GGAGCATAAGCTAAAAAGCGCA TAA TG-GCTTTCTAGCTTCAGCTCC CTTTGTGTTCGCAAT 100 46
        nrdR 2974388 .. 2974411 -  -6.8  -4.50976   TTGCACATGAGAAAA          GAGCTA-GAAG AAT CCTCTTAGCTC          TTTTAACGCTCTTTC  76 28
        dnaB NONE
        dnaI NONE
GII78_RS15640 NONE
        ytxC 2969956 .. 2969981 - -11.1  -4.96848   TTTTGCATATAAAAA         CCCCGCCCCCT ATGA AAGGGACGAGG          TTGAATAAACGGAAT 100 363
        thrS 2967960 .. 2967985 -   -12  -5.76237   TAGAGAAATAAAAAA         GCATGATCTC TTCAAC GAGATCATGC          TTTTTATTTTATTTT 100 34
        lytS NONE
        lytT 2964514 .. 2964537 -  -5.3  -4.81249   GCTGAAATGCAAAAA          GCCGC-CCAT CAAAT ATGGAGCAGC          TTTTTCAATTCCTTC  75 10
        lrgA NONE
        lrgB 2963210 .. 2963230 - -12.6  -6.14618   CATAAAATAAAAAAA            GCCAAGGC ATTCA GCCTTGGC            TTATCCTCCGATCAG 100 26
        infC NONE
        rpmI NONE
        rplT 2960935 .. 2960955 - -12.6  -5.03994   CTTTATATAGAAAAA            GCCGCTCT GCTGG AGAGCGGC            TCTATATGATTACTT 100 35
GII78_RS15580 2960609 .. 2960635 - -13.8   -5.4477   AAACTCGCAAAAAAA         GCAGAAGAGCGT TAA ACGCTTTTCTGC         TTTTTATAAATCAAA 100 29
GII78_RS15570 2958926 .. 2958953 - -12.8  -5.76633   GTACAGACAAAAAAA        TAGAATCCGCCT CAAT AGGCGGATTCTT         CCGTATCTTTATTGG 100 34
        abnA 2957766 .. 2957784 -  -5.2  -5.40072   TTTCTTTTAAAAAAA             GCCGGA GGCAGAG CCCGGC             TTTTTGATTCAATAG  84 34
        araA NONE
        araB NONE
        araD NONE
        araL NONE
GII78_RS15540 2951757 .. 2951770 -  -3.1  -2.91264   CGGGCTATTCATATA               GACCA TGGT TGATC                AGTGTTTTGTTTTCA  44 1
GII78_RS15535 NONE
GII78_RS15530 NONE
        araQ NONE
GII78_RS15520 2947037 .. 2947062 - -14.1  -3.39018   GTAGCAGTTGAAAGA         CAAGCCGGAGA TTTC TCTCCGGCTTA          GCTTCTCTTATGACT 100 33
GII78_RS15515 2945072 .. 2945094 -  -3.5  -3.33395   GTATAGAATAAGATA           TTTCATTGA TAGAT TCATTGAAA           ACCCCCTCAACATTT  48 53
GII78_RS15505 2944675 .. 2944699 -   -13  -4.02456   AAACATCATGAGAAA          GCCCAAAACA GACAT TGTTTTGGGC          TTTTGTGCGTTATTC  95 35
GII78_RS15480 2939272 .. 2939295 - -13.2  -6.09196   TGGAAAATAAAAAAA          CCCGTCCCTT GTAC AAGGGACGAG           TTGTGGCCGCGGTAC 100 299
        pheS NONE
GII78_RS15465 2935721 .. 2935742 - -13.1  -5.36441   CGCTCATAGAAAAAA           GCTTGCAGA TTTC TCTGCAAGC            TTTTTTATCAGCCTC 100 33
        zapA NONE
GII78_RS15450 2933821 .. 2933839 -  -5.3  -5.45726   CATACTTGAAAAAAA             CTTCTCC GGACA AGAGAAG             TTTTTTTATGCCCCG  88 31
        polX NONE
GII78_RS15440 NONE
GII78_RS15435 2929138 .. 2929165 - -10.1  -5.78622   GGACGGCAAAAAAAA        GAAAAAGAAAG GTAAAT CTTTCTTTTTC         TCATAATATGAACAG 100 122
        lcfA 2927311 .. 2927328 -  -7.1  -4.03234   TCCTTCCTATAGAAA             TGAATGA CTAT TCATTCA              TAATTTTATGATAAG  73 87
        fadR NONE
GII78_RS15420 NONE
        etfB NONE
        etfA 2924081 .. 2924101 - -15.5  -5.24799   TTACAAATATAAAAA            CCCGGACTT TTA AAGTCCGGG            GTTTCCTTTATGAGT 100 33
GII78_RS15405 2922372 .. 2922398 - -12.3   -4.7416   TTAAAACCTGAAAAA         GAGCGCCGG CATGAAGCT CCGGCGCTC         TTGCGCGATTAAGAA 100 34
        trxA 2921725 .. 2921746 -    -8   -5.7946   TGGCGAATAAAAAAA           GCGATCCC TCAATC GGAATCGC            TCTGGCATGTAAGCA 100 49
        uvrC 2919562 .. 2919586 -   -13  -5.88565   TCCACAATAAAAAAA          GCAATGAGAG GAATA CTCTCATTGC          TTATCAATTAATCAT 100 301
GII78_RS15390 2918230 .. 2918252 -  -9.9  -4.87291   CAGTGTAATCAAAAA          GGCGGTGACT GCAT AGTC-CCGCC           TTTTTGATTGTCATT 100 39
        sdhC 2916884 .. 2916896 -  -3.3  -4.42806   GTACTCTTAAACAAA                TGCGA AAA TCGCT                TTTAAGCCTACGTAT  62 4
        sdhA NONE
        sdhB 2914287 .. 2914306 -   -10  -5.41143   TATTGTTTAAAAAAA            CCTCTCCC ATGC GGAAGAGG             TTTTTTCTTCTTATA 100 36
GII78_RS15365 2913803 .. 2913817 -  -2.9  -3.31263   AGGTGACGTTTACAA               GATAA TTAGT TTATC               GTGTATGAAGAAGCG  46 21
        gerE 2913305 .. 2913317 -  -4.1  -4.63218   CTTTTTTGAAGAAAA                TGCAA GAC TCGCA                GGAGAGAAATAGAGG  66 181
GII78_RS15355 NONE
        racE 2911937 .. 2911957 - -13.3   -5.9362   CAAAACAGAAAAAAA            CCCGCAACA TAC CGTTGCGGG            GAAAACTATCTTTTA 100 31
        gerM 2910692 .. 2910722 -    -7   -4.2528   CCGGAATTGAATAAA      GAAAGAGG-CAGC CGGAAC GCTAACCTCTTTC       TTTCTAGTATATCAA  75 51
GII78_RS15340 NONE
GII78_RS15335 NONE
GII78_RS15330 2908726 .. 2908765 -  -3.6  -2.57211   ACGGTTTTTTAGAAT  TTTTTTCATGAGGAAGAA AATT TTCTTCCTCATGACATTT   TCATAGTGTGACTCG  45 26
GII78_RS15325 2908524 .. 2908548 -   -13  -5.56673   ACCGACAACAAAAAA          CCTCAAATCC TAAAT GGATTTGAGG          TTTTTCTTTTGGTAC 100 39
        ilvB NONE
        ilvN NONE
        ilvC NONE
GII78_RS15290 NONE
        leuB 2899754 .. 2899774 -  -8.3   -3.1355   TCTACCTAGAGCTAA            GACCGCTTA ACG TAAGCTGTC            ACACATTAGAAATTT  69 24
        leuC NONE
        leuD 2897666 .. 2897688 -  -7.6  -5.48825   CACCAGGCAAAAAAA           GCCGCCGG ACAAATA CCGGCCGC           TTTTTCAGGCTTGAA 100 30
GII78_RS15270 2896529 .. 2896539 -  -2.6  -2.89079   AATACAACCACTATA                 TTAT AAC ATAA                 CACATAGCGCTTTCA  42 56
GII78_RS15265 2895014 .. 2895038 - -12.9  -4.43859   CATAATTGTACAAAA          CAAGGCACGAA TGA TTCGCGCCCTG          TTTTATTAGTACTAT 100 55
        clpX 2893495 .. 2893520 - -17.7  -5.81412   TGCATGCAAAAAAAA         CCTCCTGAGTG TTAC CACTCAGGAGG          TTTGTGCTTATCTTT 100 39
        lonB 2891702 .. 2891720 -  -7.5  -5.52384   CCTTCATGAAAAAAA             CCCTATT ATCAA AATAGGG             TTTAAACGGATTCTT 100 27
         lon NONE
GII78_RS15245 2888618 .. 2888639 - -14.5  -5.03227   ATACGATAAATAAAA           CCGGTAGAG GATC CTCTACCGG            TTTATCATTTTTTTG 100 19
GII78_RS15235 NONE
GII78_RS15230 NONE
        hemC NONE
GII78_RS15220 NONE
        hemB NONE
        hemL 2881596 .. 2881621 - -10.5  -5.20216   GAGAGCACGAAAAAA         CCGGCA-CAAGG AGT CCTTGATACCGG         TTTTCACTCTTATCT 100 35
      spoVID NONE
        cotN 2878702 .. 2878730 -  -8.8  -4.63044   ATGGATATAAACAAA        CAAGTCCGCGCC ATTAA GACGTGGACTCG        TTTTCAGCCTGAAAT  90 10
        valS 2875382 .. 2875403 - -14.5   -3.7511   TCTTTTATAAGACAA           GGCGGTTTC TCTA GAAACCGCC            CCGGCTTTTCATTAA 100 37
GII78_RS15185 2874021 .. 2874049 - -10.4  -6.06529   TACACATAAAAAAAA        CGGCAGAATC TTTTTTTTT GATTCTGCCG        GAGCCGGATGCTTTT 100 39
GII78_RS15180 2873122 .. 2873146 -  -4.3  -5.96894   AGGCAAAGAAAAAAA          GAACAAGAC TTTTGTC GCCTTGTCC          AAAAAACGTTCGTCA  95 54
      spoIIB NONE
         maf NONE
        radC 2870532 .. 2870545 -  -2.3  -4.98531   TTCTTAAAGCAAAAA               TACCC TAAA GGGAA                AAACTCATAAACTCT  66 72
        mreB NONE
        mreC 2868568 .. 2868599 -  -4.4   -4.0251   AGCATCATAACGAAA      GGGAGAAGGAAACGT TTC ACGAT-CCTTCCTCC      TCTGTATCGACAGTC  61 10
        mreD 2868058 .. 2868071 -  -2.5  -4.34482   TTCGTCAAAAAAAGA               TAAAA TCCT TTTTA                CTCATCTCTCAATTC  57 23
        minC NONE
        minD 2866479 .. 2866504 -  -8.3  -6.20267   GCAAAAACAAAAAAA         CCTGACACAGC ATAT GCTTTGTCAGA          TTCTTCTCTTTGATT 100 49
     spoIVFA NONE
     spoIVFB NONE
        rplU NONE
GII78_RS15120 NONE
        rpmA 2863599 .. 2863620 -  -8.7  -5.79526   ATATTGCAAAAAAAA           CTCCAGTCA TCAT CGACCGGAG            TTTTTTGAATCATTA 100 38
       spo0B NONE
        obgE 2861375 .. 2861396 - -14.5  -3.63744   CCCCCCTTTAAAATA           GAGAGCCTG ACAC CAGGCTCTC            TTTTCAGCCAACATT 100 43
        thrR NONE
        pheA 2860017 .. 2860030 -  -5.2  -5.66989   TAAAGACTAAAAAAA               GCCC TCTAGT GGGC                TTTTTTTATAATTGG  88 31
        nadB NONE
        nadC NONE
        nadA NONE
        safA 2853402 .. 2853421 - -10.8  -6.09196   TTGAAAACAAAAAAA            GGAACGAT TTAC ATCGTTCC             GAACGATCACTCATT 100 32
        sgpA 2852649 .. 2852675 - -11.6  -5.30616   TGATGCAAAGAAAAA         GGCTGCCGAA TATCACT TCCGGCAGCC         CTTCCTTCCTAGCGG 100 34
GII78_RS15050 2851830 .. 2851854 -  -8.5  -4.43213   CTGAACATACTAAAA          CCGGCCCGA TATGACC TCGTGCCGG          TTTTTTATGAACGAT  86 30
GII78_RS15030 2849363 .. 2849384 - -17.3  -4.98531   TTCTTAAATCAAAAA           GGCAGCCGC ACAA GCGGCTGCC            TTTATCATGTATTTT 100 41
        iolG NONE
GII78_RS15015 2846064 .. 2846078 -  -2.1  -3.45324   TAGTTTGACCAAAGA               GGCTA CTGCT TAACC               GTTTTATCAAAATTT  45 13
        bofC 2845475 .. 2845490 -  -7.6  -5.86061   TTTCACGAAAAAAAA              GACATG AATA CATGTC               TTCAATCAGCGGACG 100 41
        ruvA 2844739 .. 2844758 -  -2.8  -2.63596   CTTCACTTGAGACGA            GCCGTTCA TCCA TGAACATC             ACCTTACTTTAATAG  41 29
        ruvB NONE
GII78_RS14995 NONE
        queA NONE
         tgt NONE
        yajC 2840969 .. 2840990 -   -13  -5.36441   CTTCCACATAAAAAA           GAGCGGGC TCACTT GCCCGCTC            TTTTTTGTTTGCTAT 100 56
GII78_RS14970 2839675 .. 2839733 -   -11  -3.11487   AATTAAAAAAGATGA GCTTCGCCGCATTCCCATTATCGGACG TCTAAT CGTCCGATAACGGTTACG-GGCGGTGC CCATCTTTTTCATCA  80 13
        comN 2837746 .. 2837760 -  -6.4  -2.60075   CCTGTGCGAATCAAC               CTGCTA TCT CAGCAG               TTCTTCCAATGCTTC  57 14
       secDF 2835464 .. 2835489 - -15.5  -5.12707   TGAAACTTCAAAAAA         CAGGCTGCCCT GCAG AGGACAGCCTG          CTATTTTTTATTGCG 100 33
GII78_RS14950 2834814 .. 2834840 -    -3  -3.13403   CTTTCCCCATCAAGA         CTGGTTTTAAAC ATG GCTTAACACTAG         GTTAAGTTCCCTTTT  45 27
GII78_RS14945 2834384 .. 2834422 - -10.4  -2.76227   GCTAACATAAATTCA  CCCCTCAACC-ACCCTA TTATAC TAGAGCAGGCTGAGGGG   TTTCAAATAATATTC  77 46
        recJ NONE
GII78_RS14935 2831458 .. 2831476 -  -3.8  -5.31545   AACAATAGGAAAAAA             GCACCC TGACATG GAGTGC             TTTTTCGTTATGCGG  78 47
        relA NONE
         dtd 2828638 .. 2828682 -   -14  -2.77876   GGATTAGAGAAATAC TTC-CAATAAAAAAAGCTGCC TTTT GGCAGCTTTTTTTATTTTGAA TCCATAATGAGCGTG 100 16
GII78_RS14915 2826472 .. 2826508 - -18.2  -5.79588   TGAAAATGAAAAAAA    CTCCCGCCCCTACTAT ACATG ATAGTAGGGACGAGAG    TTATACCCGTGGTGC 100 304
GII78_RS14910 NONE
        aspS NONE
        ssrS 2823047 .. 2823065 -  -8.8   -3.2511   TTTCATCTATAAAAT             GGCTGATC CAT GAGCAGCC             GTTTTTCTGCGCACA  71 46
GII78_RS14895 2822209 .. 2822229 - -14.1  -5.70761   AAAATAAAACAAAAA            CAGCCTTGA TCA TCAAGGCTG            TTTTTATGCATTATT 100 36
        cymR NONE
GII78_RS14880 NONE
        mnmA 2817982 .. 2818000 -  -6.7  -5.14563   CCTTTCATTAAAAAA             CCCCAAC TCAGT GTTGAGG             TTTTTCATCTTTTAT  86 37
GII78_RS14870 NONE
GII78_RS14865 2814863 .. 2814880 -  -9.1  -5.72207   TGCAAATGAAAAAAA             CTCCCGC TTGC ACGGGAG              CATTTTATTGCTGTT 100 30
GII78_RS14860 NONE
GII78_RS14855 NONE
GII78_RS14850 2813918 .. 2813939 - -11.7  -4.74013   GGCAAACATAGAAAA           GGATACTCT TTGG AGAGTATCC            TTTTTGCATTAAAAC 100 34
GII78_RS14825 2809464 .. 2809506 - -12.9  -5.22312   AGTGACAGCAAAAAA GCCCTC-CCCCTATGCAAAC CAAC GTTTACACAGGGACGAGAGC TGTCTCGCGGTACCA 100 261
        alaS 2806785 .. 2806795 -  -3.2   -3.3217   GGCGAATTATAAAAC                 GGAT TTC ACCC                 AATCTTCTACAGAAG  48 6
GII78_RS14815 NONE
        ruvX NONE
GII78_RS14805 2805661 .. 2805682 -   -13  -5.06735   CATAAAGCAGAAAAA           GCCGGAGC AGTATA GCTCCGGC            TTTGGTTTGGCGCGA 100 45
        mltG 2804469 .. 2804487 - -10.3  -4.75309   GGAAAGCGAACAAAA             GGAGAGC TTTTT GCTCTCC             TTTTATTTCTCATTT 100 28
GII78_RS14795 NONE
GII78_RS14790 NONE
GII78_RS14785 NONE
GII78_RS14780 2800749 .. 2800772 -  -9.7  -3.83324   TTATAAACAGGGAAA          GAAGGGAAT TCGCAC ATTCCCTTC           CTGCCTATACATAAT  85 74
        greA 2800051 .. 2800077 - -15.2  -5.61596   ATCTTCATAAAAAAA         CACCTCACCCAC ATT GTGGACGAGGTG         TTTCGCTGCTAAACA 100 45
GII78_RS14770 NONE
GII78_RS14765 2797489 .. 2797521 - -19.3  -4.19506   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT TTA ACCCGGCTGCTTTTG      TTTATTTTAGCTTTT 100 27
GII78_RS14755 NONE
        mtnN 2795710 .. 2795730 -  -7.6  -4.96848   GTTTTTAGAGAAAAA           CGGAGGAGA ACGT TCTCC-CCG            TTTTAATGAATTCGT  89 28
GII78_RS14745 NONE
GII78_RS14740 2793564 .. 2793578 -  -2.8  -3.29541   ACGACTATTATAATA               TAATCC GGC GGCTTA               CAGAGAAAGTAATTC  46 51
GII78_RS14735 2793263 .. 2793285 -  -9.2  -5.21506   ACAATAACAGAAAAA           CAGCCATC TCTTGAT GATGGCTG           TTTTTTTATTCGTCG 100 31
GII78_RS14720 2788926 .. 2788972 - -11.1  -5.52096   AAAGGCAATAAAAAA GGCAGCACTCAAATAACCTGTGT CAA AC-CAGGCG-TTTGAATGCTGCC TAACTTGTATGCATA 100 180
GII78_RS14715 2787752 .. 2787792 -  -9.8  -5.27335   GCGGGCAAATAAAAA CCGCAGACAAAAGAAGACA CCAA TGCCT-CTACTGCCTGCGG  GGAGTTGCGTATGTC 100 298
GII78_RS14710 NONE
GII78_RS14705 2787180 .. 2787202 - -13.6  -5.40072   TTTTCCGCAAAAAAA           GCAGAAAACA TAA TGTTTTCTGC           CCTCTTTCTAATGCC 100 33
GII78_RS14700 2786419 .. 2786471 -  -2.3  -6.04324   GCAAAAAATAAAAAA TTAAGAAAATATACCCAA-ATCCT AATGCG AGGATCTTGGATATATTTCCCGAG AAATTTTTTATTTAA  87 33
        fatR NONE
GII78_RS14690 2782461 .. 2782483 - -16.4  -3.55866   TCATATGCAAAGCAA           TCCCGCCAAT CAG ATTGGCGGGA           TTTTATATTTTACAT 100 35
GII78_RS14660 2776556 .. 2776580 - -10.1  -6.23545   GTGAAATAAAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTATATGTGTCA 100 90
        levR 2771571 .. 2771611 -   -13  -5.79588   TTAAAACGAAAAAAA TAAACCTGTATTAAAATGG TGTT CCATTT-AATACAGGTTCA  TATGAAAAAACTGTT 100 42
GII78_RS14640 NONE
        levE NONE
        levF NONE
        levG 2768834 .. 2768846 -  -2.7  -2.87132   TCTTTCCTTCACACA                CCTTA TGC TAAGA                ATCCAGCCCAATACC  42 15
        sacC 2766611 .. 2766635 - -11.5  -3.68416   TTAAAATAACGAGAA          GGCACAGAC TGTTCGG GTCTGTGCC          TTTTTTAAAATTAAG  91 36
        adhR 2763943 .. 2763976 -  -9.7  -4.42386   TCTTGATGGAGAAAA     CAGGCCAGAAACAAA ATCC TTCGTTTTTGACCTG      CCCTCTTCACACGCA  91 48
GII78_RS14570 2760618 .. 2760662 -  -4.3  -4.90266   TTCACCAATCAAAAA CGGACACCAAACAAATCAGC GTAAAT GCTG-CAAGTTCAGTGTCCG CAACCTATTATGACT  74 122
GII78_RS14565 2760484 .. 2760496 -  -2.7  -2.71731   TCCAGTCGGTAATCA                CGATT GAC AATCA                GGAAAAAGGACATGG  41 42
GII78_RS14560 NONE
GII78_RS14555 2759404 .. 2759430 - -12.4   -4.7373   TCATCGCAGCAAAAA         CCATACCAACTA TTG TTGTTGGTATGG         TTCGTCCTAGATAGG 100 77
GII78_RS14540 2756543 .. 2756563 -  -9.1  -5.28942   TACTGCAAATAAAAA            GATACCAAC ATC ATTGGTATC            TTTTAGATTGAGTTC 100 69
GII78_RS14530 2754145 .. 2754157 -  -2.7   -3.1505   ATGACTTTTGATTAA                CATAT CTT ATACG                GTGTAATAAGTTAAA  45 85
GII78_RS14525 2752575 .. 2752599 -    -8  -4.30177   TATCATATTAAGAAA         GACAAGAG-CA TGTT TGTCTCTTGTC          TTTTCCACATCATGC  78 212
        sigZ 2750840 .. 2750870 -  -9.2  -3.62275   ATGGACTATTTTAAA       GGAATAACTGAC TTTGTTC ATCAGTTATTCC       TTTAAAATACGAAAG  78 19
GII78_RS14510 2749828 .. 2749850 -  -9.1    -5.186   GAAAACAGACAAAAA           GCTGCTGGC GAAGA GTCAGCAGC           TAACACAGGAGCATT 100 151
GII78_RS14500 2748605 .. 2748628 -    -9  -4.59853   TGAACTTTTTAAAAA          GCTTAATCCT TAAA AAGATTAAGC           TTTTTTCCTTTCCAA  90 97
GII78_RS14495 2747347 .. 2747365 - -11.8  -4.20981   TGAACAAATCATAAA             CCCTATAG CAG CTATAGGG             TCAAGGGTTAGTTAT  91 33
GII78_RS14490 2746112 .. 2746147 -   -12  -5.24799   TTATAAATATAAAAA    GACCGCAAAGCCT-TCT TAA AGAGAAGCGTTGCGGTC    TTTGAGTCTCTTTTT 100 134
GII78_RS14485 NONE
GII78_RS14480 NONE
GII78_RS14475 2743163 .. 2743178 -  -6.2  -3.86015   TATTGTCTTCAGAAA              CAAAAG CCCC CTTTTG               TTAAACGCTTACATT  65 114
GII78_RS14470 2741535 .. 2741545 -    -4  -3.73072   AATGCCCTCATCAAA                 TCAA GTC TTGA                 TGGCCGCTTCCCCAC  54 238
GII78_RS14465 2741284 .. 2741309 -  -3.3  -5.80003   GGAAGAAATAAAAAA         TCAGGCGTATAG TGG CTACAAGCC-GA         CCTCCATTTCTATAC  88 53
        aadK 2735317 .. 2735327 -    -4  -4.40561   TTTCGTTAAAAAGAA                 CAAA AAT TTTG                 GACAAGAATAATCAT  63 163
GII78_RS14435 2734657 .. 2734693 -  -2.5   -5.9003   AAACGAACAAAAAAA    GAACATGTTTTGA AAAAAGATAGA TCAAAACATCTTC    TTATATGTTGTCATA  85 67
GII78_RS14430 2733557 .. 2733575 -    -6  -5.35354   CAGAGAATGAAAAAA             GCACTC TAATAAC GAGTGC             CGAAATGAAAAACTA  89 38
GII78_RS14425 2732741 .. 2732764 - -14.6  -3.98173   GGAAATCGAATTAAA          GCGCCCTTCC TATT GGAAAGGCGC           TGCCGTTTTACTGTG 100 56
GII78_RS14420 2732162 .. 2732182 -  -3.3  -3.29421   TTAAATATAAAATCA            GGACGATTT GTA AAATGATCC            ATTGAGATCAGTATT  48 2
GII78_RS14415 2730695 .. 2730719 -  -4.3  -5.88476   AAAACAAATAAAAAA          CACCGATAG GATGAAA CTATTGGTG          TTTGCAAGACATCTT  91 183
        azlB NONE
        azlC NONE
        azlD NONE
        brnQ 2726499 .. 2726525 -   -21  -5.59879   TATAAACATAAAAAA         GCGGAGCAAACC CAT GGTTTGCTCCGC         TAACCTAGTTTCTCT 100 472
        czcD 2725248 .. 2725258 -  -5.4  -2.82516   GCCCCGATTACTATA                 GTGT CGT ACAC                 ATTATCACCCCGCCA  52 113
GII78_RS14375 2724141 .. 2724155 -  -4.2  -4.87133   ACTTCTTAAATAAAA               GAGAAG GCG CATCTC               CACTTCGCTACCCTT  71 91
GII78_RS14365 2722124 .. 2722138 -  -2.2  -2.65046   GAAAAACAATAAACC               TTCAAA CAT TTTAAA               TCCCCCACCGTCTAA  40 37
GII78_RS14360 2721941 .. 2721962 -  -8.7  -5.56372   AAAGCAAAATAAAAA           CACACCTGA ATTT TCTGGTGTG            TTTCAATAATATCCA 100 52
GII78_RS14355 2720334 .. 2720359 - -11.3  -5.02074   TCATTGTTTAAAAAA         GCCTG-GATGAA AAT TTCATCTCAGGC         TTTAAGCATCTTTAG 100 69
        bltR 2717426 .. 2717439 -  -3.9  -2.73218   CACAATAGAAGCAAT               TTTTC ATAT GAAAA                TTTCGTAATCTTACA  45 36
GII78_RS14335 NONE
GII78_RS14330 2716187 .. 2716208 - -11.7  -3.96681   CGAATAAAGCAATAA           GCCGATTTA ATTT TAAATCGGC            TTTATTTATCAATTA  91 165
GII78_RS14325 2715339 .. 2715361 -  -9.2  -5.00642   TAACGCATATAAAAA           TTCGTCAACC TTA GGTTGATGAA           TTTTTATCGGCTCTT 100 29
GII78_RS14320 2714623 .. 2714634 -  -4.4  -2.50779   ACTAGAAGTTAATAC                CATG TATT CATG                 CCCCCTTTTATATTT  47 127
GII78_RS14310 2713680 .. 2713707 -  -6.4  -4.33754   AAGCAGAACTTAAAA        TGTTAAAGATAC ATCT GCATCTTTAGCA         AAATCTAAAAAGGTA  73 311
GII78_RS14300 NONE
GII78_RS14295 2712213 .. 2712235 -  -4.9  -4.54727   CCTTTCAAAGGAAAA           GGGTATC TTTTTATTC GATACCC           TTTCACATTATTAGC  71 36
GII78_RS14290 2711269 .. 2711282 -  -5.3  -3.14468   TGGTACTATAGTCAA               GACTT GTCC AAGTC                ACCATTATCAAAATG  55 153
GII78_RS14285 2710094 .. 2710109 -  -6.2  -3.57039   GATGTATAACGATAA              CTAATG TTTT CATTAG               ACTGATTATCCTTTC  61 267
GII78_RS14280 2709172 .. 2709230 - -25.8  -2.96329   GGAAGGTAATAATGA TGTTTAAAAGGTGTTTTGATCCCTGTCT CAT AAACAGGGGTCAAAACACCTTTTAATCA TCGGTTTCTTTTCTG 100 377
        yrkP NONE
GII78_RS14255 2704476 .. 2704495 -  -6.4  -3.86481   AATAATGCAGAAGAA            GCCGGA TCTCATAC TCCGGC             TTTCTCTATTTGAAA  66 89
GII78_RS14235 2702584 .. 2702596 -  -3.4  -4.68424   CAACTGATCCAAAAA                CTTC CTTAT GAAG                AACAATCTCTTCTCT  64 173
GII78_RS14230 2702082 .. 2702098 -  -5.1  -3.87869   TGAATCCTTTACAAA              CCCTTAC GTG ACAAGGG              TTTTTGTTGTTTTTC  61 148
GII78_RS14215 NONE
GII78_RS14210 NONE
GII78_RS14205 NONE
GII78_RS14200 NONE
GII78_RS14195 2699781 .. 2699800 -  -3.5  -3.91984   ATAGCCTTTAAAGAA            GTCCACT TTGCCG AGTGGGC             TTTTTTATTGCGCAT  55 30
GII78_RS14190 NONE
GII78_RS14185 NONE
GII78_RS14180 NONE
GII78_RS14175 NONE
GII78_RS14170 2696163 .. 2696181 -  -3.8  -3.02471   TTGTCAGCAGAGACA             CGACTGCT TTA AGCACTCA             GCATCCGCTCCATTT  47 15
GII78_RS14165 2695614 .. 2695636 -  -7.7  -3.77588   AGTTCATATCAAGAA           CACTGAGGC TAAGC GCTTCAGTG           TTTTTTATTTTTACG  72 36
GII78_RS14160 2695334 .. 2695352 -  -4.7  -3.63228   TTTACTACAAACCAA             TTTTAAG TGCTT CTTAAAA             CAAAGTTTATACCAC  57 32
GII78_RS14155 2694577 .. 2694620 -  -8.9  -5.63517   TTTTCAAATAAAAAA CGGACACCAAACAAACAAC GTAAAT GCTGTAAGTTCAGTGTCCG CAGGCTTTCCGTCTT 100 44
GII78_RS14150 2694067 .. 2694079 -  -3.3  -2.62244   TGGCTCAATAAAATT                TCTGC CGC GCCGA                CCTGCCTCCCATTTT  43 39
GII78_RS14145 2693319 .. 2693338 -  -7.8  -5.57888   AGCAAAAAAATAAAA            GCTCCCCC ATGT AGGAGAGC             GCATATGGTACTTTT 100 447
GII78_RS14140 NONE
GII78_RS14135 NONE
GII78_RS14130 NONE
GII78_RS14125 NONE
GII78_RS14120 NONE
GII78_RS14115 NONE
GII78_RS14110 NONE
GII78_RS14105 NONE
GII78_RS14100 NONE
GII78_RS14095 NONE
GII78_RS14090 NONE
GII78_RS14085 NONE
GII78_RS14080 NONE
GII78_RS14075 NONE
GII78_RS14070 2682020 .. 2682033 -  -3.9  -3.27923   TGCCAATAGTATCAA               TAGTA TTTA TACTA                CTATTTTAACCACTT  48 162
GII78_RS14060 NONE
GII78_RS14055 NONE
GII78_RS14050 NONE
GII78_RS14045 NONE
GII78_RS14040 2673881 .. 2673893 -  -4.1  -3.48024   TCTCATGAGGAAACA                CCATC AGG GATAG                AATTTTTCTCAACCA  52 0
GII78_RS14035 NONE
GII78_RS14030 NONE
GII78_RS14025 NONE
GII78_RS14020 2671574 .. 2671587 -  -4.5  -2.90194   AGCTGTGTAATCATA               CAAGG ACCA CCTCG                TTATTATTGAGCGTG  48 7
GII78_RS14015 NONE
GII78_RS14010 NONE
GII78_RS14005 NONE
GII78_RS14000 2669664 .. 2669678 -  -2.8  -2.80511   TTTACAACGGAACCA               CCTCCT TTA AGGAAA               AATAAAAAAGCCCTA  42 38
GII78_RS13995 2668697 .. 2668726 -  -9.9  -5.65927   GAGGCAAATAAAAAA       GGACAGCCGGATC TTAT GAGACGGCCGTCC        CTCTAACTGAAAAGT 100 9
GII78_RS13990 2668234 .. 2668254 - -11.1  -5.82172   AGTAAGATAAAAAAA            GCCACTGGC TTA GCCAGCAGC            TTTGTCTGCGTTATT 100 14
GII78_RS13985 2667345 .. 2667371 - -12.4  -3.03755   AAATAAACATAAGTA         TCTCCTTGAGAA AGA TACTCAAGGAGA         CTATTTATTTACTTC  85 34
GII78_RS13980 NONE
GII78_RS13975 2666128 .. 2666148 - -13.3  -3.33671   AGAGTCACTTTATAA            GCCCCTCTC AAT GAGAAGGGC            TTATTTTATTTAATT  95 235
GII78_RS13940 2661019 .. 2661030 -    -3  -4.74132   ATATGTTATTAAAAA                CAAT TTCG ATTG                 GATAATCAACCAAAC  65 41
GII78_RS13935 NONE
GII78_RS13930 2659926 .. 2659943 -  -6.3   -5.7827   AAGACAAATAAAAAA             GGAACTC ATTT GAATTCC              TTTTTATAACTTATT  91 39
GII78_RS13915 2657486 .. 2657507 -  -7.4  -5.79595   CTCCAAAACAAAAAA           GATACCAA TATAGT TTGGTATC            TTAAATAAAGTGAAT 100 198
GII78_RS13905 NONE
GII78_RS13900 2653906 .. 2653925 -  -2.2  -3.33298   TGCAAGCAAATAAAT            CAATTTAT TTTG ATTAATTG             TAAAACCCGCTAAAA  45 298
        arsR 2653496 .. 2653512 -  -6.7  -2.59565   AATTTGATATAATAC              CTAAAAA ATT TTTTTAG              CAGCAATCTCCTTCA  57 22
GII78_RS13890 NONE
        acr3 NONE
GII78_RS13880 2651474 .. 2651495 -  -5.9  -5.85737   ACATTAATAAAAAAA           GGACACATA TAAA TATGCATCC            TTTAACAAAAGAGTT  93 44
GII78_RS13875 2649542 .. 2649561 -  -9.2  -4.54821   ATTGTAATTACAAAA            GGGGGGTG CATA CACCCCTC             TTTAATACGTTTCAA  91 27
        nucB 2648552 .. 2648571 -  -9.3  -3.40878   AGGATTGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTTATTACTGCA  76 33
GII78_RS13845 2644850 .. 2644878 -  -3.1  -4.51777   ACAGCAGAAGGAAAA        GGATGATAAAATG TTT CATCTTTACACCC        CCAAAAGCCTCACCT  62 267
GII78_RS13840 2643935 .. 2643952 -  -7.7  -5.14965   ATTTTCAGCAAAAAA             CACCCCT AAAA AGAGGTG              TTTTAAAGGGCCGGT  93 210
GII78_RS13830 NONE
        yqeH NONE
GII78_RS13820 NONE
        yhbY NONE
GII78_RS13810 NONE
GII78_RS13805 NONE
        rsfS NONE
GII78_RS13795 2638310 .. 2638331 - -11.7  -5.07053   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGATTTCTGCG 100 12
       comEA NONE
GII78_RS13780 NONE
GII78_RS13775 2633606 .. 2633620 -  -2.8  -5.42259   TGATTTTGAAAAAAA               CGTTCA AAG CAAACG               AAATGATGCTGTAGA  79 165
GII78_RS13765 NONE
        holA 2632307 .. 2632328 -  -8.7   -5.1523   TGCATAATATAAAAA           CGATCCTCA ATAA TGGGGATCG            TTTTTTTCATTTCTT 100 10
         gpr NONE
GII78_RS13745 NONE
GII78_RS13740 2629052 .. 2629064 -  -4.1  -4.68601   ATGTAAAACAAGAAA                GAGAA AAG TTCCC                TATCATATCTGGGTT  66 60
        lepA 2627101 .. 2627121 - -12.6  -4.14627   TCTTTACAGAAAGAA            GCCGCAGT ACAAG ACTGCGGC            GGCTTCTATTGTTTT  95 31
        hemW NONE
        hrcA 2624780 .. 2624800 - -11.9   -2.7728   CTCAAAGTGTAAGGA            GAAGGACAG GTG CTGCCCTTC            GATAAAATTTGCCAA  84 48
        grpE NONE
        dnaK 2622223 .. 2622251 - -10.4   -5.7946   CGGGCAAGAAAAAAA        GTCAAAGCCAAG AGATG CCTGACTTTGAC        TTTCTAATCATTGAA 100 103
        dnaJ 2621007 .. 2621020 -  -2.3  -2.72459   CATCCAATAATTAAT               CGCCT TTAA ACGCG                CGTTTTACCTTGTCA  40 7
        prmA NONE
GII78_RS13700 NONE
        mtaB 2617863 .. 2617884 -  -9.5  -5.95539   GGCTAAATAAAAAAA           TCGGTACAT TTTA ATGCACCGA            TTTTTTAGGTTAAGA 100 35
        rpsU NONE
GII78_RS13680 2616090 .. 2616112 - -11.4  -5.64274   TTATGTATAAAAAAA           GACATCTCTC TTA GAAAGATGTC           CTTTTCTTTGCCATT 100 40
GII78_RS13675 NONE
        floA NONE
GII78_RS13665 2613173 .. 2613214 - -13.9  -4.96848   TGCCCCATACAAAAA GAACCCCCTTTCATCTCAT ATGT ATGATTTGAAAGGAGGTTC  TAACACTTTAATTTT 100 33
        yqfC NONE
        yqfD NONE
GII78_RS13650 2610680 .. 2610705 -  -9.1  -5.00765   AAGCAATCATAAAAA         TGACCCGAT AACGCGCG ATCGGGTCA          TTCAGCATTAATTTT 100 33
        pgpH NONE
        ybeY NONE
GII78_RS13635 NONE
GII78_RS13630 NONE
GII78_RS13625 NONE
GII78_RS13620 NONE
        recO 2604919 .. 2604961 - -17.9  -5.30155   GCAGCAACCAAAAAA CTCCCGTCTCTATGCTTGC CAGCC GCAAACATAGGGACGAGAG TTCTCCCGCGGTTCC 100 227
        glyQ NONE
        glyS 2601908 .. 2601935 -  -4.1  -4.13728   TATATATGGGGAAAA        GACGATTACCG ATCACA CAGCAACCGCC         TTTTCTCTCTTTATT  58 36
        ccpN NONE
        ppsR 2600316 .. 2600336 -  -4.7  -4.70659   TGGCACAGCCAAAAA            CCCAGGA TAGAGCG TCCTGAG            TTATATGTTTTTTGT  71 26
GII78_RS13590 NONE
GII78_RS13585 NONE
        rpoD 2596400 .. 2596429 -  -8.7  -5.40474   ATCTTTTTAAAAAAA       GA-AGAACGGATCT TCA AGACCCGTTCCATC       TTATTCAAGGAAATC 100 26
        cccA 2595684 .. 2595708 -  -9.9   -5.2853   CAGTCAAAAATAAAA          GGCTGTCGAGA ACA TCTCGGCGGCC          TGTGAATGTATAAAG 100 56
GII78_RS13570 NONE
GII78_RS13565 2593692 .. 2593712 - -11.2  -5.48054   AGTAAAAGCAAAAAA            CTGAGGCT GTAAA AGCCTCAG            TTTTTTTATAGAAAT 100 31
        cshB 2590391 .. 2590402 -  -2.2  -3.15544   GCCTATTCTCAGCAA                CAGG TTCC CCTA                 CTTTCTTTTCTTAGA  43 23
GII78_RS13545 2589475 .. 2589492 -  -8.4   -5.1925   TTACAAGCTAAAAAA             TGGGGG TGTTAT CCCCCA              TTTTTTATTGCTGTA 100 30
GII78_RS13535 2588133 .. 2588167 -    -8  -4.76041   CACATGTATGAAAAA    GAAAATGGC-AGCTG TCTGTC CAGCAAGCCATTTTC     TTTACTGCAGATAAA  88 77
         zur 2587598 .. 2587632 - -14.4  -3.63341   AATACGCGTCAATAA     CTGAAAAAGGAGCCCA AAC CGGGCCCCTTTTTCAT     ATATACGCATTTTAC 100 37
GII78_RS13520 2586467 .. 2586488 - -14.5  -5.28414   GAAGAAACACAAAAA           GCTTGACGG GAAC CCGTCAAGC            TTTTTTGTGTTAGAA 100 35
GII78_RS13500 2583324 .. 2583340 -  -4.4  -2.80354   TATATGTACTGAAAT             GC-CGCT TCAC AGCGAGC              CTTTCTTCATTCAAT  48 154
GII78_RS13495 2582649 .. 2582672 - -10.4  -5.80248   GAAGACATAAAAAAA          CAAGGTCC-CA TAA TGAGGACCTTG          TTTGTGCCATTATTT 100 35
GII78_RS13490 2581201 .. 2581220 -  -5.7  -5.05113   TTTACAGAAAGAAAA            GACACTC AAGTAA GAGTGCC             AGTTTTCATTTTAAA  78 88
GII78_RS13485 2578993 .. 2579011 -   -11  -5.93809   TTTGTATAAAAAAAA             CGCCCACA TCA TGTGAGCG             TTTCTTTTTAGTTAT 100 33
        pstS NONE
        pstC NONE
        pstA NONE
GII78_RS13465 NONE
GII78_RS13460 2574434 .. 2574450 - -12.3  -5.70829   AACACGATAAAAAAA              CAGGCTG ACT CAGCCTG              TTTTTTTCATCCAAA 100 32
GII78_RS13445 NONE
GII78_RS13440 2571856 .. 2571867 -  -2.2  -3.37912   GACTTATATATAATA                CCAC TATA ATGG                 ACGGAATGCTAGGCT  45 46
        rpmG 2571599 .. 2571624 - -10.5  -5.80817   CGGAATAGAAAAAAA         GCCAGAACCTT TTTC AAAGCTCTGGC          TTTTTTCTTACACCT 100 56
GII78_RS13430 NONE
GII78_RS13425 2570748 .. 2570764 -    -8  -5.38497   ACTGAAAGCAAAAAA              TCCCGT TTTTC ACGGGA              TTTTAGAAAGCTTGC  95 28
        glpG 2569115 .. 2569132 -  -4.8  -3.53566   AGTCAAGAAGAAAAC             GCTGAC AAAAAA GCCAGC              TTCCTTTCCATATTC  57 46
GII78_RS13415 NONE
GII78_RS13410 2567803 .. 2567813 -  -2.6  -3.94333   CATTAACACATCAAA                 TTAA ATC TTAA                 CCTGAGCACAACAAA  52 64
GII78_RS13405 2565784 .. 2565811 -  -7.7  -5.21683   ATTTAAAAAAAGAAA        GCCTCCCGC TCACTTCAAT GCGGGAGAC         ATTGTGATTATGATG  93 33
GII78_RS13400 2564593 .. 2564603 -    -4  -5.24129   CTTCGGCAGAAAAAA                 GAAA AAG TTTC                 AGTTACTCATGAAAA  74 28
GII78_RS13395 NONE
GII78_RS13390 2563137 .. 2563158 - -13.1  -4.35518   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATGGCT 100 33
GII78_RS13380 2562139 .. 2562163 -   -13  -4.03204   CATTAAATGCAGAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA  95 31
        mgsR 2561225 .. 2561264 - -10.8  -4.66953   TGAACAGGTGAAAAA  CCGAAGACAAGCTGATTC GAAT AAATCAGCGGATCTTCGG   TTTTTCATCATGCAG  95 33
       rsbRD 2560151 .. 2560179 -  -9.6  -5.69379   ATAGAAGTAAAAAAA        GCTGAATAGCCC GTGAA AGGCTGTTCAGC        TGCTATCTTTCAAGA 100 58
        corA NONE
GII78_RS13345 2557498 .. 2557520 - -14.2  -5.72622   CCTATAAATAAAAAA           GCAGACATGG TCA CCATGCCTGC           TTGATTCCATTTTCA 100 41
       comGA NONE
       comGB NONE
       comGC NONE
       comGD NONE
       comGE NONE
       comGF NONE
       comGG NONE
GII78_RS13305 2552903 .. 2552924 -  -2.9  -6.00814   AAGAAGCAAAAAAAA           GGTACCCGC TTGC ACAGGTACT            GTTCAAACAAAAAGT 100 233
        tapA NONE
GII78_RS13290 2551150 .. 2551161 -  -5.8  -3.71378   GATTTTATATCGAAA                CCTG TTGC CAGG                 TTTACAACTGAAGTT  63 39
        tasA 2550275 .. 2550312 - -17.1  -2.93073   TTTTGTCAATAACCA   TCGAGACGGCCCAGTAT ATGA ATACTGGGCCGTCTCTT    TTTATGGCTGTTATT 100 39
        gcvT NONE
GII78_RS13255 NONE
GII78_RS13250 2542628 .. 2542648 - -14.1  -4.30977   AAGAAATAAAGCAAA            CAGCTGTCT GGT AGACAGCTG            TTTTTATTTATCTTT 100 33
        lipM 2541174 .. 2541187 -  -2.4  -3.43071   GTTTACACTAATGAA               CTTG AAAAAA CAAG                GATGCTCCACGGGTC  45 52
        mntR 2540661 .. 2540682 - -10.1  -5.15634   CAGCGTATCAAAAAA           GACGGCCTC CTTC GAGACCGCC            TTTTTACTGATTATG 100 29
GII78_RS13230 2539624 .. 2539639 -  -2.5   -5.7946   TTCTCAAGAAAAAAA              GCCAG ACTCAG CTGAC               TGTTATAGAAGGGAA  93 71
GII78_RS13215 2537487 .. 2537505 -  -7.5  -5.08824   TTCTCATGTAAAAAA             TGTTCAC TTCTC GTGAACA             TTTTATCATACTGGA  93 54
        aroQ NONE
        papA 2535946 .. 2535965 -  -2.2  -2.74563   CCTATATTCCAATCA            CAAAATAA TAAG TTCTTTTG             GGGAATGGGTGATTG  40 3
         efp 2535323 .. 2535346 -   -11  -5.60993   TTGGGCACAAAAAAA          GCCTGCTCCC ATTT GGGAACAGAC           TTCTTTTTTTCTTTC 100 40
GII78_RS13195 NONE
    spoIIIAA NONE
GII78_RS13185 NONE
    spoIIIAC NONE
    spoIIIAD NONE
    spoIIIAE NONE
    spoIIIAF NONE
    spoIIIAG NONE
    spoIIIAH 2529564 .. 2529582 - -11.7  -4.76892   ACAGCAACGCAAAAA             GCCCGCT TGTTT AGCGGGC             TTCTTTTTCCTCTTT 100 42
        accB NONE
        accC NONE
        yqhY 2527132 .. 2527154 -    -7  -5.43866   TAACGTGTAAAAAAA           CCAAAGGG CCGCCCT CCCCTTGG           TTTCGTGTTAAGCCA 100 42
        nusB NONE
        folD NONE
GII78_RS13125 NONE
GII78_RS13120 NONE
GII78_RS13115 2522850 .. 2522864 -  -6.4  -4.42386   CCTGTATTGATAAAA               GATCCA AAG CGGATC               AACTCACTTTCAGCA  76 192
GII78_RS13110 NONE
GII78_RS13105 2520096 .. 2520119 - -11.2  -5.31456   TGAATGCAGAAAAAA          GGAATAATAG CGCC CTATTATTCC           GGTACATCTGCTTTT 100 19
        argR NONE
        recN 2517777 .. 2517801 - -14.4  -5.96894   ATGTAAACAAAAAAA          TAAGCTGCGC TTTTC GCGCAGCTTA          CCCAGTTGTTTTGAC 100 23
      spoIVB 2516326 .. 2516344 - -14.6  -6.11229   ATCAAAATAAAAAAA             CTGCCGGA AAC TCCGGCAG             TCAGCTTGCTTTTTC 100 26
       spo0A 2514810 .. 2514833 - -15.4  -3.62032   AGATTAATGTGCAAA          GACTGCCGAA ACGA TTCGGCAGTC           TTTTTTCCCTTTATA 100 458
GII78_RS13070 NONE
GII78_RS13065 NONE
GII78_RS13060 2511372 .. 2511394 -  -7.7  -5.32565   GAATGAATGAAAAAA           GAAGGCTGC GTCAA ACAGCCTCC           TTCTAACAACTATTC  95 35
GII78_RS13055 NONE
GII78_RS13050 2509204 .. 2509217 -  -5.3  -3.08679   CCCCCGGATGGAATA               GACTT CAGG AAGTC                TTCTCCTCATAGTCA  53 16
GII78_RS13045 NONE
        mmgD NONE
GII78_RS13035 NONE
        prpB 2504504 .. 2504521 - -12.7  -5.45726   GATAGCTGAAAAAAA             GCCGGAG AATG CTCCGGC              TTTTTTTGTTGCATT 100 39
GII78_RS13020 NONE
        yqiS NONE
GII78_RS13010 NONE
GII78_RS13005 NONE
        lpdA 2497352 .. 2497362 -  -6.8  -3.80855   GCTTTTAAAAATGAA                 TGGC TTT GCCA                 TCTGCGGCAAGCGCT  66 4
      bfmBAA NONE
GII78_RS12990 NONE
       bfmBB 2493987 .. 2494021 - -14.6  -5.06585   TAAAGCATAGAAAAA     GAGCATTTTTTGAAAC AAA ACTTCAAAAAATGCTC     TTTTTGCTTATTTAG 100 37
        brxB 2490268 .. 2490291 -  -7.4  -5.64274   TTATGCACAAAAAAA          CCCGGGCTGCT TTG AGCATCC-GGG          TTGTTCGTCTTATAC 100 35
        artP 2489236 .. 2489257 - -10.2  -5.10461   CCTATTCAATAAAAA           GGCTCAAC GAAAAA GTTGAGCC            GCTTTTTTTTACTTC 100 34
        artQ NONE
        artR 2487778 .. 2487799 -  -5.2   -5.4505   TTCTTCAATAAAAAA           GAAG-AGGC GGCCA GCCTTCTTC           TTTTTTATATTCTAT  88 37
GII78_RS12945 2486716 .. 2486769 -  -7.1  -5.64304   GAACATAAGAAAAAA CGCATAAGCTCCTCCTTTTTCATTAG GTTGA CCAATGAA---GGAAGAGCTCATGCG AATCATCCGAGTGAT 100 28
GII78_RS12940 2486154 .. 2486173 -  -2.9  -3.15544   CTGTACTCTCAGGAA            TCGTCAT GTTTCT ATAACGA             TAAAAAAGCAGGCGC  45 42
         mce NONE
GII78_RS12925 2484056 .. 2484068 -  -7.7  -2.89602   CCCTCCATATTAAAG                CGGTA TGT TACCG                TGCTTTTTTTTCGGT  64 7
GII78_RS12920 2482882 .. 2482892 -  -8.2  -5.47821   ATGGAGCTAAAAAAA                 CCCG ATG CGGG                 AAATCGCACTCGGGT 100 50
GII78_RS12900 2479437 .. 2479447 -  -2.6  -4.17023   TTAATCATTTTAAAA                 TTTA AAT TAAA                 ATAAAATGATATTTA  55 84
        gndA 2477951 .. 2477976 - -15.5  -4.89477   TCCTTAATAACAAAA         CCCCCAAAGCT TAAG AGCTTCGGGGG          TTTCTATTGATTACT 100 36
GII78_RS12885 2475185 .. 2475197 -  -6.3   -4.3739   CATCTCCTTATAAAA                CGTAA TGA TTACG                TTTTATTATACAACA  73 73
        rpmG 2474981 .. 2475006 -  -4.7  -5.54192   ATTAACGTAAAAAAA         GACCGGG CCGTAAGGGATT CCCGGTC          TTTTTTATTATTTTG  88 33
GII78_RS12865 2471244 .. 2471264 - -14.1  -5.10767   GATGCAAGACAAAAA            CAGAAGGCA CAG TGCCTTCTG            TTTTTTATTTTTCCC 100 30
GII78_RS12855 NONE
GII78_RS12850 2468152 .. 2468181 -  -2.2  -2.55378   AAGCAGAGCATGAAG       GACTTCTGAATG AACTGA CATTCAACAATC        TCTCCCTTCCACAAA  40 88
        dsdA 2466785 .. 2466805 -  -6.9  -4.13767   CTCTGTAGGTTAAAA            CCCTTACAA AGA TTGTAACGG            AAAACCTTTTCACTG  73 46
        coaA NONE
GII78_RS12835 2465207 .. 2465229 -  -9.9  -5.36441   GCTTTACATAAAAAA           CGGAAGAGA ATGAA TCTCTCCCG           CAAACATGAGGTGAA 100 200
GII78_RS12820 NONE
GII78_RS12815 2461347 .. 2461359 -  -3.5  -3.28712   CTCTTTTTCTCACAA                TATAA AAA TTATA                TTTTGCCTGGCTGGA  47 143
GII78_RS12810 NONE
GII78_RS12805 NONE
GII78_RS12800 NONE
GII78_RS12795 NONE
GII78_RS12790 2458836 .. 2458861 -  -9.8  -5.64304   CAACAGAATAAAAAA         GCGAAAG-GCC TCTTC GGCTCTTTCGC         TTTTTTATGTTACAG 100 35
GII78_RS12780 2457505 .. 2457526 - -11.6  -4.95155   CTCATAGCAGAAAAA           CCAGCACC TGTACG GGTGCTGG            TTTATTTATATTGAT 100 27
GII78_RS12765 NONE
GII78_RS12760 2454440 .. 2454485 -  -9.1  -4.99043   CCGCGAGAAACAAAA GCAGACTGCTCCTCA-GGCCA TAGAAT TGGCCACGTGGAGCAGCCT-C GACTTTACCATTTCT  93 139
        ansA NONE
        aspA 2451544 .. 2451581 - -10.2  -3.55444   TCCCTATGTTGTAAA  CAGCTTATTCA--TCCGA CTAT TCGGAGATGAATAAGCTG   TATTTTATACAAATT  80 41
        mleN NONE
GII78_RS12735 2448678 .. 2448701 - -13.2  -5.89921   ATGATAAGAAAAAAA          CAGCACCTGC TACG ACAGGTGCTG           TTTAGCTACATTTAT 100 37
GII78_RS12730 NONE
      spoIIM NONE
         fur 2447054 .. 2447072 -    -6  -5.66989   GAAACAGCAAAAAAA             CCTTTCCC TAT GAGAAAAG             GTTCGCGCTCGGCAC  91 44
GII78_RS12715 NONE
        xerD 2445824 .. 2445841 - -12.7  -5.63517   GCTCTAAACAAAAAA             GCCGCAG CCAC CTGCGGC              TATGCTCGCGGATGA 100 25
        deoB NONE
GII78_RS12700 2443614 .. 2443643 - -12.3  -5.60993   TTGGGCATAAAAAAA       GACAGCTGTGT GATATCAG ACACAGCTGTC        TTTTGGTCCTGCATT 100 50
GII78_RS12695 2442301 .. 2442312 -    -3  -3.06183   TCGATTTCGACGGAA                TGAA TTCC TTCA                 CCGTGACAAAACTAG  43 57
     spoIIAA NONE
     spoIIAB 2441465 .. 2441476 -    -3   -2.7186   AAATCTCCTTAATTA                CAAA GCGC TTTG                 CTTTTTGATAAGTGC  41 7
        sigF 2440661 .. 2440683 - -14.2  -5.36441   TTTGCACACAAAAAA           GCTAGCCTGC ACT GCAGACTAGC           CATCCGTATGATCCA 100 21
      spoVAA 2439937 .. 2439949 -  -3.4  -2.64704   GAACAATACACTAAC                GATC ATGCA GATC                CTTTATGGTTTCTTG  43 8
      spoVAB NONE
      spoVAC NONE
      spoVAD 2438029 .. 2438041 -  -3.4  -3.20078   TAGTCCATATTAAGA                TGCA CCTCC TGCA                CGCTCAAATACAACC  47 7
      spoVAE NONE
     spoVAEA NONE
      spoVAF 2435548 .. 2435568 -  -6.9  -3.76224   CGCTTATGGATGAAA            GGACAGT TTTATGG ACTGTCC            CTTCATAATTAAGAC  69 77
        lysA 2434171 .. 2434188 - -12.7    -5.011   ATTCAAATAAGAAAA             GCGCCGA AAAA TCGGCGC              TTTCTTTTATTGCTT 100 32
GII78_RS12630 2432570 .. 2432590 -    -9   -5.4833   TTACCCAATAAAAAA            GCTCCCTC TATAT GAGGAAGC            CTTTTGCCTGCCAAT 100 40
GII78_RS12615 NONE
GII78_RS12610 NONE
GII78_RS12605 2430360 .. 2430370 -  -3.2  -5.86332   CGAATCGAAAAAAAA                 TCCC ATT AGGA                 CCATTGAAGTGATTT  88 378
        lepB 2429723 .. 2429743 -  -3.2  -5.82281   AAAGATATAAAAAAA            GCAGCCCC AATGG GAAACTGC            TTGATCCTAATTTGT  88 32
GII78_RS12590 2429135 .. 2429171 - -16.1  -4.88388   ACAATTTGAGAAAAA    CAAAACATCACCCTTCG ATC CGAAAGGTGATGTTTTT    TAATCATTCACTTTT 100 25
        ribD NONE
        ribE NONE
GII78_RS12575 NONE
        ribH NONE
        ribT 2424815 .. 2424838 - -16.8  -5.97575   AACGCAGAAAAAAAA          GCAGAGGCTG ATGA CAGCCTCTGC           TTAATTATTGTATGA 100 26
        scpA NONE
        scpB NONE
GII78_RS12545 2422061 .. 2422081 - -11.2  -5.88197   GCAAACATAAAAAAA            CTCTCCCT GAAAA AGGGAGAG            TAAACGTTATCTGAT 100 32
GII78_RS12540 NONE
        spmA NONE
        spmB 2419690 .. 2419704 -  -4.2  -5.89947   CAAATCTAAAAAAAA               CGCC GTTTTCA GGCG               CTCCCAAATAATAAC  91 19
        rluB NONE
        resA NONE
        resB NONE
        resC NONE
        resD NONE
        resE 2412786 .. 2412806 - -12.6  -5.52384   TGGCTATTAAAAAAA            CACCCGCT CAGTC AGCGGGTG            TTTCTTATGGAACAA 100 68
        sigX NONE
        rsiX 2411000 .. 2411015 -  -6.1  -5.31059   ATAGCAACTAAAAAA              GAGCC TTAAAG GGCTC               TTTTTAGTTTAAGGA  89 29
GII78_RS12485 2410107 .. 2410126 - -10.8  -5.68023   CCATAATTAAAAAAA            CTCAAGCT ATAT AGCTTGAG             TTTTTTTATTGTTCT 100 39
        fmnP 2407416 .. 2407453 - -15.9  -2.81361   AAATTTGAATAGAAG   TAACTAAAAAAGCTCCC GAAC GGGAGCTTTTTTATTTA    ATGGATATGTGCACT 100 23
GII78_RS12465 NONE
GII78_RS12460 NONE
GII78_RS12455 NONE
GII78_RS12450 NONE
GII78_RS12445 2402474 .. 2402485 -    -3  -3.29144   CCATTCTTTTTAGAA                CTTA TCAA TAAG                 ACGGACAATAAAAAA  46 74
GII78_RS12440 2401542 .. 2401561 -  -6.6  -4.04206   CTACTTGCACACAAA            TCATATAA CACA TTATATGA             GATGATGAGTCATAG  70 132
GII78_RS12435 2400894 .. 2400909 -    -9  -5.95166   TTTAACGAAAAAAAA              CTGCTG AAAT CAGCAG               TTTTCCGTTGCATTT 100 41
        gudB 2399446 .. 2399467 -  -7.4   -5.7946   TTCCGAATAAAAAAA           TCTCCTAT TTTATC ATAGGAGA            TTTTTTATTTTTATG 100 53
        ypdA 2398380 .. 2398404 -  -9.4  -5.86609   TTAAAAAAACAAAAA          GAGCATACGA ATGCA TCATATGCTC          CTCATCTTTAATGGT 100 33
        prsW 2397613 .. 2397633 - -12.5  -5.37043   ACTGCACACAAAAAA            GCCGCACGG TTG CTGTGCGGC            TTCTATACTTGCATC 100 28
        sleB NONE
        ypeB 2395161 .. 2395183 -  -8.5  -5.64006   ACGTAATGAAAAAAA           GGAAAAGAC ATTTA GTCCTTTCC           TCCTGTTTTTTATAG 100 35
        dgrA NONE
GII78_RS12400 2394230 .. 2394246 -  -3.7  -2.73203   TGATGAATAATTAAT              GTTTGAA GGT TTCAATC              CTATTGTTTTCCTCC  45 4
GII78_RS12395 2393340 .. 2393364 -  -9.5  -4.01902   ATATGTATTAAAGAA          TCATCCAAAAA AGT TTTTTGAATGA          TCAATAAAAAGTTTT  85 133
        rpsA NONE
GII78_RS12385 2390995 .. 2391019 -  -9.4  -5.16133   ATCATAACACAAAAA         GCCC-AAACCA CATA TGGTTTTGGGC          TTTTATCATTTATCG 100 35
GII78_RS12375 NONE
GII78_RS12370 NONE
GII78_RS12365 2389035 .. 2389050 -    -9  -4.72007   TTTTATGAAAAGAAA              CCCTTC AGAG GAAGGG               CTTAACTCATTTATT 100 72
        engA NONE
        gpsA 2386348 .. 2386377 -  -9.4   -5.9218   GATAGAACAAAAAAA       CTGAAGCAAAGA GGGGGA CCTTCGCTTCAG        TCAACTTGACTATAT 100 226
GII78_RS12350 NONE
GII78_RS12345 2385247 .. 2385279 -  -9.3  -5.82172   ATTAATATAAAAAAA      CCTTTCTCCCT ATTTGTATGCA AGGGAGAAAGG      TTCATTCCTTTTTCA 100 27
      spoIVA 2383590 .. 2383613 -  -3.2  -5.69793   AGAGCAAAGAAAAAA          GACCTC-CCAT TCT ATAAAGAGGTC          TACCGGTATTACAGG  84 34
         hbs 2382889 .. 2382917 - -14.7  -3.34715   CATGTTCTTGAAATA        TGAAAAGCCCCTT AGA AAGGGGCTTTTCT        GTGAAGAAATAAAGT 100 79
        folE NONE
        mtrB 2381947 .. 2381961 -  -2.7  -3.01924   CATTTGCTTTTAACA               GCGGG GACAG CCAGC               TTATTTTTTTTCGCT  43 26
GII78_RS12320 NONE
        menG NONE
GII78_RS12310 2379312 .. 2379322 -  -6.8  -3.48064   CTGATAATTAATCAA                 TCCG GGG CGGA                 GAAATTTCTTAATAT  64 50
GII78_RS12305 2378626 .. 2378641 -  -7.6   -5.7946   GTTTCAATAAAAAAA              TCAGCT TTTC AGCTGA               TTTTAGATCGTTGGG 100 166
        cheR 2377755 .. 2377768 -  -2.5  -3.21036   GACTACTATAACATA               TTTTT CAGC AAAAA                GTCAGTCTATCTTTT  45 32
        aroC NONE
GII78_RS12290 NONE
        aroH 2374915 .. 2374938 - -12.6  -4.76087   TATATAACAAATAAA          CCCAAAAGAA AGAC TTCTTTTGGG           TAGAATAAACATACA 100 147
GII78_RS12280 NONE
        trpD NONE
        trpC NONE
GII78_RS12265 NONE
        trpB NONE
GII78_RS12255 NONE
GII78_RS12250 2367818 .. 2367838 -  -9.8  -3.88498   GGTTTATAGACTAAA            GAGGTGAT ATTCG ATCACCTC            TTATAAAATTTCAGC  85 26
GII78_RS12245 NONE
        aroA 2365363 .. 2365383 - -12.7    -5.252   GATCTGCATAAAAAA            TCCTGAAGT AAA ACTTCAGGA            TTTTTTCGAAAGCTT 100 20
GII78_RS12235 NONE
GII78_RS12230 2363131 .. 2363152 - -10.9  -3.65046   CCTTTACGGCAACAA           GCCTTGCAA TTCA CTGCAAGGC            TGGTCATATTATGTG  88 34
GII78_RS12225 NONE
GII78_RS12220 NONE
        qcrB NONE
GII78_RS12210 2360473 .. 2360489 -    -8  -5.36441   TGTCCATATAAAAAA              GCTGAC GCCGG GTCAGC              TTTTGATAATAAAAG  95 72
GII78_RS12205 NONE
        ypjB 2358944 .. 2358960 - -10.8  -5.48063   ATGTAATAGAAAAAA              GGCGGC TGACC GCCGCC              CCTCATCCTTATTTA 100 34
GII78_RS12190 NONE
GII78_RS12185 2356740 .. 2356751 -    -3   -2.8372   CATGCGCGATCAAAG                CAAT TTTC ATTG                 TTTATCCCCCCGTCT  42 39
        mgsA NONE
       bshB1 NONE
        bshA NONE
GII78_RS12165 NONE
GII78_RS12160 2352158 .. 2352178 -  -6.2  -5.55698   TACAAGCCAAAAAAA           CCTTC-CGT TACA ACGAGAAGG            ATTCTTCACTTTCTA  91 190
        panB NONE
        panC NONE
        panD 2349992 .. 2350007 -  -7.5  -5.10163   AATCTTAAAAGAAAA              CCCCC GATAAA GGGGG               CTTTTCTTCTACAAA  93 34
        dinG 2347078 .. 2347092 -  -8.5  -4.16943   TCCCACACCGCAAAA               GCCGC TTTAT GCGGC               TTTTATTCTTTTTCC  79 28
GII78_RS12135 NONE
GII78_RS12130 NONE
        aspB 2345053 .. 2345072 -  -6.4  -5.00642   CAATGCAGATAAAAA            GCGGCT TTTCTGTC AGCCGC             TTTTTGATCTGTTAG  82 37
        asnS 2343606 .. 2343623 -  -7.7  -4.62069   CCTTTACTGTAAAAA             GTCTCCC TTGC AGGAGAC              TCTTTTTTGTTTCAT  84 50
        dnaD NONE
         nth NONE
GII78_RS12105 2341666 .. 2341685 -   -10  -5.60689   GTACACAATAAAAAA            CCTCCCGT TTTA ACAGGAGG             TTTTATCGATTCATC 100 28
GII78_RS12090 2337199 .. 2337221 -   -15  -3.05384   CGCCCTTCTACGTAA           GAAGCAAGGA ATT TCCTTGCTTC           TTTATTTTTTGAGCC 100 27
GII78_RS12080 2336653 .. 2336663 -  -2.4  -2.71325   TCACTCACAAATTCA                 GCCG ATG CGGT                 ATACCTTCTCAAACG  40 12
GII78_RS12075 2336221 .. 2336247 - -12.4  -4.70739   TAAAAACAACGAAAA         GAAGACAGCC TTTTACC GGCTGTCTTC         TCTTGCAATTTCATC 100 11
GII78_RS12065 2335405 .. 2335435 - -12.8  -5.00616   TTTCTTTCCAAAAAA       TAAGCATGAATGAA CGA TTCATTCATGCTTC       TATCATTTAAAAAAG 100 28
GII78_RS12055 2334336 .. 2334353 -  -9.1  -5.80364   AGTTGAATAAAAAAA             GCAAGGC ATAC GCCCTGC              TTATTTCGCTTTGAT 100 26
GII78_RS12050 NONE
GII78_RS12045 2330749 .. 2330763 -  -8.6   -3.1855   CCGGGGAATATTTAA               GAGGAA TAT TTCCTC               TTCAGCCGGGCAATT  71 7
GII78_RS12040 NONE
        cotD NONE
GII78_RS12030 NONE
        gpsB 2329147 .. 2329157 -  -2.6  -3.46509   CGTTAAGAACATGAA                 TTAT TAT ATAA                 CAACTGATTACAATT  46 68
        rnpB 2328697 .. 2328717 -  -8.3  -4.66537   CTTTTCAAGATAAAA            GCTCTCC TTATACG GGAGAGC            TTGTTTTCATCATTT  88 61
GII78_RS12015 2327469 .. 2327491 -  -9.2  -4.00532   GGCTGAAAGATGAAA           GAAGACGC ATGCAGA GCGTCTTC           TTTTTATGCGTTTTC  85 29
GII78_RS12005 2326909 .. 2326923 -   -10  -5.94214   AATACAATAAAAAAA               CTTGGC AAT GCCAAG               TTTTTTGCAGTTTAC 100 37
GII78_RS12000 2324878 .. 2324897 - -12.2  -5.72622   CTGACAAATAAAAAA            GCTGACGA ACGA TCGTCAGC             TTTTTTCCATTACAT 100 35
        kdgR NONE
GII78_RS11980 NONE
         eda NONE
        kdgT 2319362 .. 2319387 -  -4.7  -4.37092   ATTGTTTGTATAAAA         GGCTGCC GGTATGTTTTGT GGCAGCC          TTTTTATTCAGTTGA  68 33
        ypwA 2317749 .. 2317771 - -13.4  -3.88029   ATTCGATATAAAAGA           GCCTGACGAC CGC GCCGCCAGGC           TTTTGATTATGACAG 100 32
         xpt 2316873 .. 2316887 -  -3.5  -3.39895   TTTCTCATGAATGAA               CCTCC TGTAC GAAGG               ACACTTTCCCTTCTT  48 0
        pbuX 2315533 .. 2315548 - -10.4  -5.50499   TTATATGCAAAAAAA              CTCCGC CGCG GCGGAG               TTAGACTGCTGTTTT 100 26
GII78_RS11950 NONE
        bpsB 2313857 .. 2313867 -    -4  -2.58427   AACATGGTTGAGAAT                 GATT TTC AATC                 GCTATTTTACGCTGT  45 27
        fbpC 2313649 .. 2313665 -  -7.9   -5.5208   GGAGAATAGAAAAAA              GCCGCCA TTA CGGCAGC              TTCTATAAAAGAAAA 100 69
        dynA NONE
GII78_RS11930 NONE
GII78_RS11925 2309371 .. 2309396 - -10.6  -5.93252   CCCAAAAATAAAAAA         CAGTATCTCT TTAATT AGAGATACTG          TTTGGATATATATCA 100 38
GII78_RS11920 2308405 .. 2308436 - -12.5  -4.77629   AAAAGCAATACAAAA      CGCTAGAGAAGATC TAAAC GATCT-CTCTAGCG      TTCAGCTTTTCAAGC 100 7
GII78_RS11900 NONE
GII78_RS11895 2306185 .. 2306211 - -16.8  -4.02051   GATGAATTCAAAGAA         TAAAAACCGCAG CTT CTGCGGTTTTTA         TTTTTAGTGATTGGT 100 29
        degR 2305561 .. 2305580 - -13.6  -3.37299   GAGATGACAAATAGA            GGAGAGGC ATTC GCCTCTCC             TATTTGATTTTCATC 100 25
GII78_RS11860 NONE
        hdhQ NONE
GII78_RS11850 2300105 .. 2300157 -  -9.4   -4.8543   TAATTTTTATAAAAA GTGAATTCACATAAAAAAGGTGCA TGATC TGCACCTTTTTTATCTTTATTCGC CTTTTTTTCTGCTTT 100 18
        ilvD 2298086 .. 2298134 -  -9.2  -5.72616   ATTGACATAAAAAAA GCCCCCTC--TAGTATCCTTCA TCTGAAG TAAAGGATACTATAGAGAGGGC CGGATTTCAAATGTT 100 76
        brxA 2297626 .. 2297642 -  -9.4  -5.26119   CTCCCAAAAAGAAAA              TGCCCG GAGAA CGGGCA              TTTAGCAGTGCGCAT 100 27
GII78_RS11835 2296815 .. 2296836 - -14.5  -4.24075   ACCGATTAACAGAAA           GCCCGTGAT ATGA ATCACGGGC            TTGTTTGAATGACGC 100 18
GII78_RS11830 NONE
GII78_RS11825 2295374 .. 2295395 - -10.3  -5.64304   TAACACAATAAAAAA           TCATTTCTG AACC CAGAAATGA            TTTTTTTATAGTCAG 100 37
GII78_RS11820 NONE
GII78_RS11815 NONE
GII78_RS11810 2293380 .. 2293400 - -12.6  -4.73094   AACAGTAACAGAAAA            GCGCAGTC TTCAC GACTGCGC            TTTTTTATGCACGTA 100 30
        ilvA 2290148 .. 2290164 -  -2.1  -2.71268   TTCTATTATATATGA              TGCCAGC CGG GCTGTCT              GTCATTTTGCGCGGT  40 53
GII78_RS11790 2289796 .. 2289841 -  -6.9  -5.86965   ACTGAGCAAAAAAAA TCCTGCATGCCTCCCCATTA ACGATTA CAAAGGAG-GGCATGCAGGT AAAAAACGGCATGTT 100 39
        scuA NONE
GII78_RS11780 NONE
GII78_RS11775 NONE
GII78_RS11770 2287476 .. 2287495 -  -2.1  -5.15634   GACCGCACGAAAAAA            GAGACGT TGTTTC ATGTCTC             TTTTTTCATGACTTA  69 31
GII78_RS11765 2286049 .. 2286074 - -10.5   -5.4477   AAACGGTGAAAAAAA         GCACATACCGA TATA TAGGTATGTGC          TTTTCGCAGTGCTTC 100 43
        msrA NONE
        msrB 2284477 .. 2284505 -  -9.6  -4.98758   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTAACACTTTAT 100 37
GII78_RS11740 2281906 .. 2281922 -    -8  -5.38047   TATTCATAGAAAAAA              GCAGCT GCACA AGCTGC              TTTCTATTCTAGCCG  95 34
        cgeC 2279956 .. 2279978 -  -6.9  -5.19879   CGTCAAACATAAAAA           CGGCTCCGC AGCAA GCAGAGCCT           CTGTCATCATTTAAA  90 36
        cgeD NONE
        cgeE 2277787 .. 2277801 -  -4.2  -2.96216   TCTTATCACGATATA               CGGCAT TTT ATGCGG               GCCAAGTCCCAAATG  50 60
        yoyG NONE
GII78_RS11705 NONE
GII78_RS11700 NONE
GII78_RS11695 NONE
GII78_RS11690 NONE
GII78_RS11685 NONE
        ablB 2272681 .. 2272697 -  -2.3  -2.62184   TTTCGGTTTATACCA              TTTGTTT TTC AAACGAA              CTCCTCCTCGCGCAT  40 49
        ablA NONE
GII78_RS11670 2269833 .. 2269861 - -10.4  -4.40882   TATAAATTAAAAGAA        CCAGAGAGCT ATGTGAGGG AGCTCTCTGG        CGTTATAGTGGCTGT  95 182
GII78_RS11665 2268785 .. 2268795 -  -5.4  -4.78752   ACTACAACTGAAAAA                 GAAG CTT CTTC                 AGAGACAACTGGAGA  76 288
GII78_RS11655 NONE
GII78_RS11650 2266920 .. 2266939 -  -3.5   -5.2015   TCAATAACAGAAAAA            GACAGCC TAATAT GACTGCC             CTTTAATGACTAACA  73 78
GII78_RS11645 NONE
GII78_RS11640 2264267 .. 2264290 -  -8.8  -2.87211   AGCTTTTTGTACAGA          GCTGGGGTGC GCCA ACACCCTAGC           CTTTTTATTTTATGC  69 238
GII78_RS11630 2263434 .. 2263460 -  -2.2  -5.47159   TCTAATAAATAAAAA         CGCCCAGC ACTTTTACTAA GCTGGGCT         TTATCTCAAATTCAA  76 37
GII78_RS11620 NONE
GII78_RS11615 NONE
GII78_RS11610 NONE
GII78_RS11605 NONE
GII78_RS11600 2257879 .. 2257909 - -11.2  -4.08557   TCCTTTAAATAATAA       TGAGAGCGAGCCTT ATA AAGACTCGCCCTTA       GAATTAATTCATTAC  89 119
GII78_RS11595 2256962 .. 2256978 -  -9.4  -3.71851   AACAACATAAATCAA              GCGAGC AAACA GCTCGC              TTAGTCATTTTTTTG  81 26
GII78_RS11535 2237195 .. 2237217 -  -9.9  -4.73973   ACATAAAATAAGAAA           GAGGAACGC TTAAT GCATTCCTC           TTTTCTTTGTTTAAA 100 266
GII78_RS11370 2211374 .. 2211394 -  -5.5   -3.4052   GTCTAACTTAATGAA            TGTTAAACA GTT TGTTTTACA            GTATAAACCCGTCCT  57 144
GII78_RS11365 2210688 .. 2210702 -  -7.8  -4.86731   GTTTCCTAAAGAAAA               GCCCCA AAA TAGGGC               TTTTTATTAATGCTC  88 32
GII78_RS11360 2210011 .. 2210037 - -10.3  -3.33583   ATAATATGGGTAGAA         CTAAAGGAGAA GTTCA TTCCCCTTTAG         CTTGGTACTCATCTG  80 34
GII78_RS11355 NONE
GII78_RS11350 2209501 .. 2209525 -  -7.2  -4.44608   TGTATTCAAAAATAA          GGAACGATAA TTGCC TTACCGCTCC          CTTATTTATAACGCA  79 44
GII78_RS11345 2208172 .. 2208188 -  -4.4  -2.92951   GAGACCCCTATAAAT              CCCTTA TGTAC CAAGGG              TTTCAAAAACGATTT  48 67
GII78_RS11340 2207417 .. 2207429 -  -3.4  -3.33361   GATTAACCAGATCAA                CAAC ACTTG GTTG                CCCTTCATTCAACTT  48 132
GII78_RS11335 NONE
GII78_RS11330 NONE
GII78_RS11325 2206430 .. 2206440 -    -4  -3.28712   TTTTTCTCTGGATAA                 TGAA AAA TTCA                 AAGATGTTTAATCTT  48 39
GII78_RS11315 NONE
GII78_RS11310 NONE
GII78_RS11305 2202628 .. 2202647 -  -6.5  -4.72272   TTGCGGTATGAAAAA            GAGCATT TAGATT AATGCTC             TTTTTAAGTAGTTTT  80 49
GII78_RS11295 NONE
GII78_RS11290 NONE
GII78_RS11285 NONE
GII78_RS11280 2201437 .. 2201455 -  -3.9  -5.35815   CACACTAAACAAAAA            GCAG-TCT ATTC AGATCTGC             TCCTTAGTGTTTTCT  78 16
GII78_RS11275 NONE
GII78_RS11270 2200260 .. 2200272 -  -2.7  -3.29511   CGCACTTTCTCAGAA                CCAAT ATC ATTGA                ATCCAAATAAATTCA  46 61
GII78_RS11265 2199765 .. 2199786 -  -9.5  -2.91383   ATTTTTATCGAGACA           CAATGAGGA TTAA CCCTCATTG            TGCATAATTGGCCAA  73 13
GII78_RS11260 NONE
GII78_RS11255 2198234 .. 2198264 - -11.2  -4.67635   CTTAAAACTACAAAA       GACGCTTAGCTCAT TAA AAGAGCCAAACGTC       TTCCTTTTCTCTGCT  95 92
GII78_RS11250 NONE
GII78_RS11245 NONE
GII78_RS11240 NONE
GII78_RS11235 2196086 .. 2196098 -  -4.1  -2.90349   TTGCTAAATTTAAAG                TTACC AAA GGCAA                TCTGGTTAATCAAGA  46 81
GII78_RS11230 NONE
GII78_RS11225 2193629 .. 2193655 -  -9.6  -5.58522   GAGATAAAAGAAAAA         TCCATTTAACTA AAA CAGTCAAATGGA         TTTCATATTTAAATC 100 34
GII78_RS11215 NONE
GII78_RS11210 2192551 .. 2192577 -  -8.8  -2.72227   AATATCTGTCAATTA         GATTCGGCCA ATTTATG TGACCGAATC         TAATTTTAATCTGAG  68 31
GII78_RS11205 NONE
GII78_RS11200 NONE
GII78_RS11195 NONE
GII78_RS11190 NONE
GII78_RS11185 2190596 .. 2190612 -  -3.8  -3.14468   TTCGATTACAGTTAA              GTTATT GTTCA AATAAC              ATTCCTCCATTTAAT  48 58
GII78_RS11180 NONE
GII78_RS11175 NONE
GII78_RS11170 NONE
GII78_RS11165 NONE
GII78_RS11160 NONE
GII78_RS11155 2187962 .. 2187983 -  -3.1  -4.21812   CTTCAGGTAAAATAA           TTGATTTAA TCAT TTATATCAA            TCCAATCCAAGTTTG  59 65
GII78_RS11150 NONE
GII78_RS11145 2187251 .. 2187263 - -10.5  -2.51133   TATTGATTTATTAAG                GGGGG GAA CCCCC                TCTTTCATTATTAGG  75 201
GII78_RS11135 NONE
GII78_RS11125 2185445 .. 2185463 -  -8.9  -2.91264   TCTTTTATTTATAGA             GGCATGT CATAC ACATGCC             ATCTAAGGAGAGATA  69 309
GII78_RS11115 2184384 .. 2184394 -  -2.6  -4.36914   CTCCTTCCTACAAAA                 TAAA TAT TTTA                 TTTTCACTCTAATTT  60 153
GII78_RS11110 2183742 .. 2183758 -  -3.7  -3.48064   TGCAGAACGAAGTAA              GTTCCAC TCT ATGAAAC              AAGTAAAATCTGAAT  52 213
GII78_RS11095 NONE
GII78_RS11090 NONE
GII78_RS11085 NONE
GII78_RS11080 2180165 .. 2180177 -  -3.3  -2.86259   TATTCAACAATATCA                TGGTG CTA CTCCA                GCAATACAATACACA  44 10
GII78_RS11075 2178381 .. 2178392 -  -4.4  -2.66462   CCAAACAAACAAAGG                GAAC AAGT GTTC                 TTATTGAGTTTTTTA  47 38
GII78_RS11070 2177989 .. 2178015 - -12.4  -3.41051   TTATTCGTATGATAA         CTAGGCTAATCT TAG AGACTAGCCCAG         CATTGCCTTATAAAT  89 33
GII78_RS11065 2177561 .. 2177578 -  -3.5  -3.00128   GATTAAAGAGAATTA             TATCATG GATT CATAATA              TTTAAACAATTTCAC  45 27
GII78_RS11060 NONE
GII78_RS11055 NONE
GII78_RS11050 2174881 .. 2174902 - -10.9  -2.78073   ATCACTCCTAATAAG           GAGGAGAGA ATAA TCCCTCCTC            TTTTATTCTGCTAGA  79 28
GII78_RS11045 NONE
GII78_RS11040 2172849 .. 2172861 -  -6.9  -3.64599   TTATCATACTTCAAA                GGGCG CTA CACCC                CTCATCCTGCTTTTA  67 27
GII78_RS11035 NONE
        recJ NONE
        dnaE NONE
GII78_RS11020 NONE
GII78_RS11015 NONE
GII78_RS11010 NONE
GII78_RS11005 NONE
GII78_RS11000 NONE
GII78_RS10995 2163881 .. 2163898 -    -7  -3.37522   ACGGTAGTTAACTAA             GGAGTG CTAGTT CACTCC              TTCCCTCTTTGTTTT  65 39
GII78_RS10985 2162994 .. 2163008 -  -2.1  -2.64144   TTCTTATCGAAATAC               TCCTC TTGTG AAGGA               CATACTTGATTCTGA  40 56
GII78_RS10980 2161545 .. 2161555 -  -6.8  -3.32294   CTAAAGCTTTGACAA                 GGAG ACC CTCC                 AACTAAAAGATCAAA  62 293
GII78_RS10970 NONE
GII78_RS10965 NONE
GII78_RS10960 NONE
GII78_RS10955 2159134 .. 2159147 -  -3.9  -4.18421   CAATCATATAAATAA               TTGTT AAGA AACAA                AGGCGATTTTGAATA  61 86
GII78_RS10950 2158061 .. 2158082 - -10.9  -3.01791   ATCTGTTTTTCAAGA           GTAGGAGAG TTTC CTCCCCTAC            AGTACAATATGGCTG  79 205
GII78_RS10945 2157757 .. 2157769 -  -2.7  -3.39469   ACATTTGAATAAAAG                GAATA TTT TATCC                ACTTATTTTGTATTT  46 20
GII78_RS10935 2156977 .. 2156992 - -10.4  -3.55907   GAATAAAACCCAGAA              GGAGCG ATCC CGCTCC               CATTAAGAAAACAGT  82 172
GII78_RS10930 2156536 .. 2156554 -  -2.4  -2.51312   AGAATAACAAACCAG             CCAGAACT AAT AATCCTAG             AGCTATTTGAGGTTT  40 114
GII78_RS10925 NONE
GII78_RS10920 2155550 .. 2155560 -  -2.6  -4.15543   CAAATATCTTTAAAA                 TAAA ACT TTTA                 TTTAGACTTATTGTC  55 136
GII78_RS10910 NONE
GII78_RS10905 NONE
GII78_RS10900 NONE
GII78_RS10895 NONE
GII78_RS10890 NONE
GII78_RS10885 NONE
        nrdI NONE
        nrdE 2150849 .. 2150861 -  -3.5  -3.85698   TTGCTGCGTCATAAA                TTTTT GTC AAAAA                TATTCTCCTATCTTA  55 289
GII78_RS10865 2149184 .. 2149201 -  -9.9  -3.05463   AGTCTTTGTACTCAA             CCCATTG ATAA CAATGGG              ATTAACATCCTCTTC  76 469
GII78_RS10855 2148806 .. 2148827 -  -2.4  -2.70932   CCCTCCTTTTAATTA           CAATAAAA TTACCC TTTTATCG            TAATTCGTTTAGTAA  40 20
GII78_RS10850 NONE
GII78_RS10845 NONE
GII78_RS10840 NONE
GII78_RS10835 NONE
GII78_RS10830 NONE
GII78_RS10825 2145858 .. 2145881 -  -5.3  -3.84915   CACAGCAAGCAATAA          GAGATAGCA TTAAAC CGCTACCTC           AAAAAAAAGCTTGTC  63 11
GII78_RS10820 2145305 .. 2145317 -  -6.3  -2.97131   TTTAAATAAAAAACT                GTTGT CTC ACAAC                CCTCTTATTATTATA  56 54
GII78_RS10815 2144770 .. 2144783 -  -2.4  -3.01745   CCGCCAATAACGATA               TCTC CAAAAC GAGA                TTTATAACCGAAATA  42 113
GII78_RS10805 2143879 .. 2143891 -  -7.7  -3.22491   AAACTGCATGATGAA                GAGGT TTG ACCTC                TTCATTTTTTTTACG  66 76
GII78_RS10795 NONE
GII78_RS10790 NONE
GII78_RS10785 NONE
GII78_RS10780 2141383 .. 2141399 -  -2.3  -2.80796   TTCTATGATTTAAAT              CAAACCA GGT TAATTTG              TTCTGCACTTAATCC  41 8
GII78_RS10775 NONE
GII78_RS10770 NONE
GII78_RS10765 NONE
GII78_RS10760 NONE
GII78_RS10755 NONE
GII78_RS10750 NONE
GII78_RS10745 2138726 .. 2138741 -  -2.6  -5.17576   TACTAAGTGAAAAAA              CAA-TGG AAA CCAGTTG              ATTCAAGACTCAATG  70 246
GII78_RS10735 2137904 .. 2137924 -  -6.8  -4.34559   AAATATAAGAAACAA            GGCCACTC TTAAT GAGCAGCC            TTTTTCTTTTTATTA  73 156
GII78_RS10720 2136144 .. 2136160 -    -3  -3.48144   AAGAATACTGAAACA              TGACTC AGGAG AAGTCA              AAATAGTTGCGTTTC  48 13
GII78_RS10715 2135808 .. 2135825 - -11.3  -5.72616   ATGGACATAAAAAAA             TCCGCAG TGAT CTGCGGA              TGAAACAGCTATTAT 100 37
GII78_RS10710 NONE
GII78_RS10700 2134538 .. 2134566 - -16.2  -3.84873   ATAGAACATGAATAA        TAAAACCGGAGC TGACC GCTCCGGTTTTA        AGCCTCACTCATCTT 100 30
        pgpB NONE
        yodL 2133481 .. 2133496 - -10.4  -4.46581   TAAAACTGCAGAAAA              CTGCGG GTTT CCGCAG               TTTTCTTTTCATTAT  95 37
        deoD 2132404 .. 2132429 - -11.9  -4.09117   CGCATTCATAAAGAA         GAGGC-TGCCGG CAC CCAGCACGCCTC         TTGATATATTTTATT  93 36
        ldcB 2131503 .. 2131527 - -11.5  -3.52717   ACCAGACACAATGAA          GCCCGCTTA TCTAGTG TAAGCGGGC          TTTTCATTTTAAATT  87 34
GII78_RS10660 2128844 .. 2128866 - -17.8  -5.60993   GGGCGCATAAAAAAA           CCATACGCGG CAG CCGCGTATGG           TTTTTTTACATTTCT 100 31
GII78_RS10645 NONE
GII78_RS10640 2125405 .. 2125429 - -15.1  -4.84274   TAAGGATATGAAAAA          CCTTAGTCCGA AAT CCGGACTAAGG          TTTTTTTATACAATC 100 31
        yodB 2123928 .. 2123958 - -13.4  -5.93809   TCCCCACAAAAAAAA       GAAGAGAGAGCTCC AAA GAAGCTCTCTCTTT       TTTCATAAATGCGAA 100 383
GII78_RS10620 NONE
GII78_RS10615 2121465 .. 2121487 - -14.9  -5.26316   TCATCCGATAAAAAA           CGGCCTGCA ATCGA TGCAGGCCG           TTTTTATTAATAGAA 100 32
        rarD 2119988 .. 2120010 -  -3.4  -3.92659   GGCTGAAAAGCCAAA           GGCCTCAA TGGCTTT TTGACGCC           CGTTTCCACTTCACT  55 7
GII78_RS10600 NONE
GII78_RS10595 NONE
       bshB2 2118575 .. 2118599 -   -13  -5.46698   CTTAAAATTAAAAAA          GGTATAAGGC TTAAG GCCTTATACC          TTTTTGATTAATCAT 100 33
GII78_RS10575 2115378 .. 2115399 -  -8.1   -5.0916   TCTTCAAGACAAAAA           GCATTCAGCT AGA AGC-GAATGC           TTTAATAAAGATACG 100 96
GII78_RS10570 2113985 .. 2114009 -   -13  -4.71482   ATGAAATGGCAAAAA          GCCTGTTCTT TCGAT AAGAACAGGC          TTTTACACTATGCGT 100 33
GII78_RS10565 2112371 .. 2112383 -  -4.8  -5.72622   GGTATAAACAAAAAA                GCCT ATAAA AGGC                TTTTTGTCATACTCA  88 44
GII78_RS10560 NONE
GII78_RS10555 2110750 .. 2110760 -  -5.4  -3.64703   GCCTCCTCATTCAAA                 CAGA GTT TCTG                 CAATATTTCGAACGG  60 6
GII78_RS10550 2108799 .. 2108824 -  -7.7   -4.7339   AACAAACGCCAAAAA         GCATAGGAT TAAGGGCT ATCCTATGC          TTTTATGAAGCAGTT  88 15
        sucA NONE
        odhB 2104448 .. 2104473 -   -12  -5.18561   TAAATATGCAAAAAA         GGTACATCAC TTTATC GTGATGTACC          CTTTTTTATTATCCT 100 34
GII78_RS10530 2101886 .. 2101905 -  -7.8  -5.52384   GCTCTATTAAAAAAA            GCCCCC CTTTCTCC GGGGGC             TTCGTGTTTTAAAAA 100 34
GII78_RS10510 2097057 .. 2097073 - -13.7  -5.71983   TTAACCACAAAAAAA              CCGCAGC TGA GCTGCGG              TTTTATGTATCGACT 100 78
GII78_RS10505 2096342 .. 2096365 - -12.5  -3.89957   TGTAATAAGTAATAA          GAACAGGGC GCACAT GCCCTGTTC           TTGTTTTTATATATA  95 85
GII78_RS10490 NONE
GII78_RS10480 NONE
GII78_RS10475 2094059 .. 2094087 -  -8.9  -6.06723   TTTTTCAAAAAAAAA        GCAAGTACATCTA ATA TCGGTGTACTTGC        TTGGCATTTTTACTT 100 35
GII78_RS10470 2093285 .. 2093310 -  -7.7  -5.03994   GTGTATATACAAAAA         GACTCCTAT TTGTAACG ATAGGAGTC          TTGGCTTTATTAGAA  89 35
        ssrS 2092876 .. 2092898 - -12.1  -5.58522   TAGATAAAATAAAAA           GCCATTTCC GAAAA GGAAATGGC           TTTCGCTACGTCTTG 100 24
        recQ NONE
GII78_RS10455 2089826 .. 2089848 -    -7  -5.89921   AGCAGAACAAAAAAA           GACACAAGCC AAA AGCTCATGTC           TTTTATCACAATCTA 100 46
GII78_RS10425 2083687 .. 2083710 - -14.6  -3.66139   TAGACACACTTCAAA          GGCCGGAGGCT ATT AGCC-CCGGCC          TGTTAGGTTTACGCC 100 34
GII78_RS10420 2083027 .. 2083043 - -10.9   -5.1287   TTTACACGTAAAAAA              GCCATAC TGA GTATGGC              TTTTAATAATACGGT 100 28
        czrA 2081719 .. 2081758 -  -4.4  -5.50774   TACAATAAAGAAAAA  GACATCCTTGCCC-GCT AACAGCG AGTTAAGCAAGGATGTC  TTTTTCAATCATGCT  84 30
GII78_RS10400 2080025 .. 2080052 - -12.9  -4.19927   AAAATTATAGACAAA        GAAACCTGACA GCAGTG TGTCAGGTTTC         ATATATTTTTTGCAT  95 17
GII78_RS10395 2079455 .. 2079492 - -12.3  -5.06414   TCCTCCTAACAAAAA   CTAATGGCGTTAGTT TTATTATT AACTAACACCATTAG    TTTTTCAAGAGTTTA 100 41
GII78_RS10390 NONE
GII78_RS10385 NONE
GII78_RS10380 NONE
GII78_RS10375 2076569 .. 2076583 -  -2.9  -2.63455   GGAGATATACAATAT               TCTTT TAACT AAAGA               GCCATCATTTTTTAT  41 30
        csaA 2076158 .. 2076180 - -16.4  -4.28254   CCTCAATACGCAAAA           GACGTTTGCC TTA GGCAAACGTC           TTTTTTTGCGTTATC 100 36
GII78_RS10360 2073792 .. 2073811 -  -8.6  -5.95946   TGAATAACAAAAAAA            GACAGCCA GAAC TGACTGTC             TTATACATCGTGCGA 100 26
GII78_RS10355 NONE
GII78_RS10350 2072797 .. 2072821 -  -9.2  -4.56133   TCTCAATAAGTAAAA          CGCCCAGCAC TTATT GAGCTGGGCA          CTGTTTCATATTTAA  91 37
GII78_RS10310 NONE
GII78_RS10305 NONE
GII78_RS10300 NONE
GII78_RS10295 2066631 .. 2066647 -  -8.7   -5.1861   TGGACTATGAAAAAA              GCCAAGG TTT CCTTGAC              CTTTATCTACTATTT 100 61
GII78_RS10285 2065231 .. 2065242 -  -2.2  -2.52635   AGTTTTATTAGCAAT                CCTC TGGT GAAG                 GTATTTACCCGTCAT  40 97
GII78_RS10280 NONE
GII78_RS10275 NONE
GII78_RS10270 NONE
GII78_RS10265 NONE
GII78_RS10260 2062425 .. 2062441 -  -3.7  -2.57522   TGAAGCGATATTAAG              CAAACAA AAA CTGTCTG              GATATTTACTGTTTG  44 100
GII78_RS10250 2061168 .. 2061187 -  -6.5  -5.24531   ATGCGGTATAAAAAA            GAGCATT TAGTTT AATGCTC             TTTAGCCTGCCTAAT  86 36
GII78_RS10240 NONE
GII78_RS10235 NONE
GII78_RS10225 2059930 .. 2059945 -  -3.4  -3.39668   CTCTAAACCTCACAA              TAAAAT GATT ATTTTA               TTACTATTATACTAC  48 78
GII78_RS10220 NONE
GII78_RS10215 NONE
GII78_RS10210 2058385 .. 2058398 -  -8.1  -5.39221   ACAACAATTAAAAAA               GCCCT CATA AGGGC                TTTTGCATAAAACAA 100 41
GII78_RS10200 2057138 .. 2057162 -  -7.3  -4.43681   GAGCGAATATTAAAA          GTATTTGTAAT TTA ATTACAAATTC          CTAGAAACACATTAT  79 495
        xynA 2056047 .. 2056071 -  -7.2   -5.0916   TGTGCAATATAAAAA          GAACCTGG GCAATTTCA CCAGGTTC          TTTCTTAATTTACAT  90 312
        ppsA 2053012 .. 2053027 -    -9  -4.02132   GTTTAAATTTATAAA              GGAGCT TTTT AGCTCC               TTTTTCTCTTGTTTT  81 298
GII78_RS10180 2052404 .. 2052414 -  -3.2  -3.80831   TTAAAATAAACAACA                 GGAT ATC ACCC                 AACCCATCTACTTCT  52 33
GII78_RS10175 2051950 .. 2051961 -  -4.4  -3.71686   TTCAATGCAATAGAA                CAAC ATTT GTTG                 TCTCAGAGGTTATCT  57 63
GII78_RS10160 2049647 .. 2049668 -  -4.4   -5.4492   GACACATATAAAAAA           TGCTCCCA TAAGTT CAGGAGCA            CTACAAAAAACTGCT  84 51
GII78_RS10155 2048931 .. 2048956 - -10.6   -5.4148   TAAACAATGAAAAAA         GCTAATGTCT GCATGT AGACATTAGC          TTGGCTGGTGTTTAG 100 68
GII78_RS10145 NONE
GII78_RS10125 NONE
GII78_RS10120 2043131 .. 2043155 -  -3.7  -3.92869   GCAGTCAGTCACAAA          GTCTCTATT CGTATTC AATAAAGAC          TTTGTGATCATCAAC  56 219
GII78_RS10105 2041561 .. 2041571 -  -3.2  -3.98312   GAGACAAAATTTAAA                 CGTA TAT CACG                 CCTTACATACAATTT  55 72
GII78_RS10100 2040929 .. 2040948 -  -8.6  -5.63517   TCCGCAAATAAAAAA            GTGACCAC CAAT GTGATCAC             AAATACATCAAATAA 100 42
        oxdD 2039573 .. 2039595 -  -7.1  -4.98857   ATTCAAGCAGAAAAA           CCCTACATA ACATA TATATAGGG           ATTTGATAAAACACA  85 94
GII78_RS10090 2038651 .. 2038666 -  -2.5  -4.32034   CCATGATCATGAAAA              GGAGT GGCTTA ACCCC               CAAAATACAAGCCCT  60 502
GII78_RS10075 2035944 .. 2035958 -  -7.1  -4.17109   AATAACGAAATGAAA               CAGGC TGTTG GCCTG               ATAACAGCTATACAG  73 47
        exlX 2034981 .. 2035000 -  -6.4  -5.17054   AGAACATTGAAAAAA            CAGCGG GAAAAGAT CCGCTG             TTTCGTATTTTTTAT  86 37
GII78_RS10060 2031466 .. 2031501 -    -7  -4.39889   ACAACCACAGTAAAA   GTAGCCAACCCCCACC GAATAA GATGGGGGTTG-C-AC    GTAAGTAGCCTGTTT  79 39
GII78_RS10025 NONE
GII78_RS10020 2024592 .. 2024605 -  -6.7  -4.10429   AATGATTCCTCAAAA               CAGCA AAAA TGCTG                CCGCCTTAAATCAAT  70 31
GII78_RS10015 2023243 .. 2023262 -   -10  -5.36364   GTAAAAAGACAAAAA            GCG-CCCTG TTG CAGGGGCGC            TTTTTGATTAAGATG 100 33
GII78_RS10010 2021837 .. 2021853 -  -3.7  -2.82895   CCTGCGACTAATAAT              CTTTTTG CTG CATAAAG              CTTGGTTAATTCCCC  46 422
GII78_RS10005 2019815 .. 2019835 -  -3.9  -3.95435   CTGCCCAAAATAGAA            GGGGCAG CCAGCCT CTGCACC            GACTCCAGTATGGGA  56 94
GII78_RS09985 2017130 .. 2017145 -    -9  -5.96894   ATTCAAATAAAAAAA              CCTGTC GAAA GACAGG               TTTTCATTTTTACGG 100 35
         rtp 2016457 .. 2016484 -  -6.9  -3.93659   ATGAAAAGCAGGAAA        CACCCGGTTCA TACTGC TGCGCCGGGTG         TTTGTTTCTATTAAA  71 36
        proC NONE
        proB 2014297 .. 2014331 -  -6.5  -5.84381   GTATCAATAAAAAAA    TGAACCCGA-GCTTCT ATAT AGAAGCTTCGGGTTTT     TTTCTGCAAATTAAT  93 36
        gltB NONE
        gltD 2007131 .. 2007158 -   -15  -5.83226   AATGGAATAAAAAAA        GAAACCGG-CTGG CAG CCAGACCGGTTTC        TCTTATATGATAATC 100 49
        yofA 2004995 .. 2005019 -  -7.9  -6.11392   AAATAAATAAAAAAA          CTGTACTCGCT TCA AATGAGTACAG          TTTTTTCATGCAGAT 100 156
GII78_RS09935 2002786 .. 2002806 - -11.3  -5.82281   AAACATACAAAAAAA            GACACAATT TCA AATTGTGTC            CTAATCCTCATCCTT 100 26
GII78_RS09930 NONE
GII78_RS09925 2001781 .. 2001807 - -12.4  -4.55295   GTTTGCATAAAGAAA         GACAACAGGC GAAAAGT GCCTGTTGTC         TTTTTGTGTATAACG 100 37
GII78_RS09915 1999471 .. 1999494 - -11.1  -5.99154   TATCAAATAAAAAAA          CACCGTTCA AACTTA TGAACGGTG           TGATTCGGAGGCTAT 100 37
GII78_RS09910 NONE
        dacB 1996853 .. 1996875 - -10.7  -5.77988   ACAGACATAAAAAAA           CCTGTTTTC TCTTG GAAAACAGG           TCTGCCGCTATTATT 100 36
        ppsA 1988834 .. 1988849 -  -3.3  -3.92659   TTTTCAAAAGTTAAA              GATCT TTCACG AGATC               TTCGATGCTAGATAA  55 5
        ppsB NONE
        ppsC NONE
        ppsD 1962609 .. 1962621 -  -3.4  -4.21194   TTTCATTAGTGAAAA                CTGA GCATA TCAG                CAATCTCTTGCAGGG  59 3
        ppsE 1958718 .. 1958742 - -16.5  -4.58943   TTGATACAAAAAGAA          GCGGACAGAGA ATG CCTCTGTCCGC          GAATCCGCTCTATTG 100 35
GII78_RS09875 1958226 .. 1958258 -  -5.8  -5.48163   AAATAAACGAAAAAA     GTCCT-AAAGCATGTT GTG AAC-CGCTTTTAGGAC     TTTTTATCATTCATC  91 19
GII78_RS09870 1956554 .. 1956572 -  -9.6  -5.25656   AAAATCACTAAAAAA             GACGACTT AGA AAGCCGTC             CTTCTCATTTCTTAC 100 37
GII78_RS09865 1956296 .. 1956308 -  -4.8  -3.53811   CTGATCCCCGCGAAA                GGCT TCTTC AGCC                GGATCAGTCAACACA  57 29
GII78_RS09860 NONE
GII78_RS09855 NONE
GII78_RS09850 NONE
GII78_RS09845 NONE
GII78_RS09840 NONE
GII78_RS09835 NONE
GII78_RS09830 1948324 .. 1948344 -  -9.7  -4.27886   TTGTAAATATACAAA            GGAGCGC TTTTTTT GCGCTCC            TAAGTTCTTGCTTTT  86 39
        nrnB NONE
        xynD 1942722 .. 1942744 -  -9.1  -2.63382   TGGCATATCCATAAT           GGCGGGC TGTTCCGGT GCCCGCC           CGTACTTCACCCGCC  68 69
        xynC 1941326 .. 1941349 - -11.8  -5.92399   CAACAAAATAAAAAA          GCGATTTCCC AATC GGAAAATCGC           CAATTCAGACACTCT 100 66
GII78_RS09780 1936553 .. 1936575 - -16.4  -5.70522   AACAATAATAAAAAA           CCCGCTCATA CTA TATGAGCGGG           TTTCGTTTGTTTTTT 100 193
        plsY 1930514 .. 1930529 -  -3.3  -3.26722   GTCATATTCATAACA              GAACA CCCCTT TGTTC               TTCATTTGAATTTTC  47 93
GII78_RS09755 1930197 .. 1930217 - -14.1  -5.42259   TCATTTGTAAAAAAA            GAACGCACA TGA TGTGCGTTC            TTTTTTATTGGTATT 100 30
        sspO 1924963 .. 1924975 -  -4.1   -2.8272   TCATAAAATGAGAAC                CTCCT TAA AAGAG                TTCGGTGTTATTGAT  46 33
GII78_RS09710 1924783 .. 1924798 -  -4.7  -5.66684   GAACGCATAAAAAAA              CAGAC ACTAAG GTCTG               CTTTTCTTACATATC  88 32
        cotM 1924293 .. 1924322 -  -9.5  -5.47821   ATGGACGGAAAAAAA       GTCACTTTCAT AATAGGGG ATGAAAGTGAC        TTTTTATGTTTAGCT 100 35
GII78_RS09700 1923644 .. 1923665 -  -8.8  -5.33921   AAATGAATTAAAAAA           CCTTTCCT CTTGTC AGGAAAGG            TTTTTTATTTGAGAA 100 30
        ynzD 1921484 .. 1921509 -  -9.2  -4.39828   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCATTCA  91 34
        lexA 1916261 .. 1916286 - -12.6  -4.44667   TTTTTGAACAACAAA         CCCCCTCTCC GTAAAG GAAGAGGGGG          TTATTTCATGCATCT 100 55
GII78_RS09635 1914666 .. 1914690 -  -9.3  -4.67755   ATAGCTACTGAAAAA          TAGGAGGCGAT AAG ACAGCCTCCTA          TTCCTTATGCTTCTC  91 23
GII78_RS09585 1904927 .. 1904956 - -11.7  -5.40474   ACCCTTGGAAAAAAA       CAAAAAAGAGAGA TACC TCTCTCTTTTTTA        TTCTTCGACAGCCTT 100 23
       tatAC 1904019 .. 1904039 -    -9  -4.84353   ACAAATCAAAATAAA            GAGCCGAT TTTTC ATCGGCCC            AAACGATTTATCCTA 100 38
        cotC 1903629 .. 1903644 - -11.8  -4.49311   CACAAACAAAAAAGA              CCCGGC AATA GCCGGG               GGAAAGTAAAAACGA  95 58
GII78_RS09560 1902989 .. 1903005 -  -4.5  -4.63044   ATGTATATAAATAAA              CAAAATA TTT CATTTTG              AGTGATGTAAGGGAC  68 95
GII78_RS09555 1902156 .. 1902175 - -10.7  -4.59117   AAATTAATTATAAAA            CCGCCAG ACAATG CTGGCGG             CTTTTTGCTGCTTCG  95 42
        cotU 1899481 .. 1899503 -    -4  -5.38321   AAATATCATAAAAAA           GCCCCCGG TATGTCG CCGGGGAA           TTAATAGACGTTTAA  78 46
         alr 1896259 .. 1896285 - -16.8    -5.252   TAGTTTCAGAAAAAA         CAAAATCCCTCT GGT AGAGGGATTTTG         ATTCAGCATTTTAAG 100 46
        yncB 1893558 .. 1893581 -   -11  -4.18674   TTTACACACAAATAA          CCCCCTCACA TTGA CGTGAAGGGG           TGTTTTTTATTGTTA  90 185
GII78_RS09495 1888837 .. 1888854 -  -8.5  -5.88565   CCTAGAATAAAAAAA             CTCATCT TTAA AGATGAG              CTGTACATTCCATAA 100 44
GII78_RS09440 1878700 .. 1878712 -  -4.1  -5.01553   AATCCACAAATAAAA                CCTGT TTT ACAGA                TCTGTTTTTGAGAAA  72 108
GII78_RS09435 NONE
GII78_RS09430 NONE
GII78_RS09425 NONE
GII78_RS09420 1874150 .. 1874176 -   -11   -4.0648   AAGCATATGAAACAA         GAAACCTACTTT TAA ACAGTAGGTTTC         TTTATCGCGGTATTG  89 49
GII78_RS09355 1863646 .. 1863662 -  -5.9  -3.16881   TATTTATTTCATTAA              CTCCTTT GGC AAAGGAA              GGCTTATTCTAGCCC  58 29
GII78_RS09350 1863084 .. 1863103 -   -10  -5.00616   TTTTCTGTGAAAAAA            GAGCAACC AGTT GGCTGCTC             GATAAATAATTATTT 100 100
        cwlC 1850893 .. 1850919 -  -7.9   -5.7946   TCTTGAATAAAAAAA         CCCGGTTTCTC GCGAT GAGGAGCCGGG         TTTTTCTATGAGACG 100 57
GII78_RS09235 1843624 .. 1843642 -   -11  -4.72846   TCACACACTTAAAAA             GACCCCTT TTT AAGGGGCC             TTTTGCGTTTAATAA 100 34
        ebrA NONE
        ebrB 1842824 .. 1842848 -  -7.1  -5.14682   GGAGAATAAAGAAAA          CAGACGGTC ACTCACA GGCCGTCTG          TTTTTTATCTTCAGC  90 8
        aprX 1839478 .. 1839507 - -10.1  -4.80455   TATTCAAACACAAAA       CCGGCAGTTCTGCT GAG AG-AGAATTGCCGG       CTTTTTGGTGCTTTC 100 40
GII78_RS09200 NONE
GII78_RS09195 1838091 .. 1838124 - -18.3  -4.03413   ACGGCTCGATATAAA     GCAGCGCCTTTGAAC GAAA GCTCAAAGGCGCTAC      GCTGTATTATTTTGA 100 53
GII78_RS09190 1836671 .. 1836694 - -14.6  -4.51238   CTGAGAAAACACAAA          CGCCCCCTCT TTTA AAAGGGGGCG           TTTTGAATGTTATTT 100 35
GII78_RS09105 1759306 .. 1759329 - -12.4  -5.52347   AACAAAACCAAAAAA          GGCCCTTTCC ACTG GGGAAGGGCC           TTTTTCATCATGTTA 100 38
GII78_RS09100 1758218 .. 1758243 -  -6.2  -4.12225   AACGACGAAATCAAA         GCGCTTCTGGA CGACC TCC-GAAGCAC         ATCAGACCCATTTAC  68 514
GII78_RS08555 1649246 .. 1649265 - -13.6  -5.15167   GACGATTAAGAAAAA            GGCCCCAA CATC TTGGGGCC             TTTTTCTTTTTTATC 100 36
GII78_RS08485 1633675 .. 1633699 - -13.5  -5.00895   TTCACCACATAAAAA          CGCCTGCCACA TAT CGGGGCAGGCG          TTCATTTTGTTATAC 100 35
GII78_RS08395 1614199 .. 1614226 - -12.8  -4.73677   GTGAGAAGAAAGAAA        TAAGCCAGAGCA CAAA TGCTCTGGCTTT         TCTTTATGCGGCTCA 100 38
GII78_RS08125 1554417 .. 1554435 -  -3.1   -4.4009   TCGTATGTGAGAAAA             CAATACC AGTCA GGTATAG             AGCTTGCAAAAAAGC  62 468
GII78_RS08105 NONE
GII78_RS08100 1551894 .. 1551912 - -13.2  -4.35926   AGCTGAAAGCGAAAA             GCACCTGA GAA TCAGGTGC             TTTTTCTATACATTT 100 31
       spoVV 1548669 .. 1548690 -  -5.9  -3.61591   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  61 20
GII78_RS08040 1543429 .. 1543451 -  -9.2  -4.52047   GACGATATCATAAAA           GGTACAGC GAAATAT GCTGTACC           TTTTCGTTACATTTG  91 32
        ctaA 1536110 .. 1536135 - -13.4  -5.09173   CAAGACCTGAAAAAA         GACCAAAGCC GCCTAA GGCTTTGGTC          TTTAGTCCTTATGAT 100 34
GII78_RS07980 1528859 .. 1528879 -  -2.5  -4.30978   GTGAAGCTATTAAAA            GGTGAGA GATCAGG TCTCGCC            CAGCTCGCAGCTGAT  57 53
GII78_RS07970 1526770 .. 1526790 -  -5.4   -5.4593   CCAAAATAAGAAAAA            GCTAAAGC GCAAG GCTATAGC            TTAGTCATTGTTGTT  88 26
GII78_RS07965 1526439 .. 1526473 - -17.4  -3.06073   GACAGTCTGCAAAAT     CATAAAAGACTCAGCT GAA AGCTGAGTCTTTTTTG     TGTTCTGTATGGTTA 100 51
GII78_RS07950 1523875 .. 1523893 -  -7.4  -5.13137   TAAAGAAATGAAAAA             CACCGC TTTCTTT GCGGTG             TTTTTTGATTACAAT  90 62
GII78_RS07945 1523012 .. 1523036 - -12.2  -5.71712   GCTGATATAAAAAAA         GCGCTTGTCCG ATTC CGG-CAAGCGC          TTTTTCACATTAAGC 100 35
        nprE 1518117 .. 1518134 - -11.3  -4.91084   TATGTAACAATAAAA             GCCTGAG GGAT CTCAGGC              TTTTTCTAATATTAC 100 37
GII78_RS07915 1516843 .. 1516863 - -14.1  -5.27335   GGGTTCAAATAAAAA            GCCTCTCAA ACA TTGAGAGGC            TTCTGATGATTTGAA 100 43
GII78_RS07895 1514319 .. 1514340 -   -13  -5.12971   AAGATGTAAGAAAAA           GAGCCGGG GGATAT CCCGGCTC            TTTTTTATGCTTGTG 100 30
        speA 1512356 .. 1512378 - -17.8  -5.94597   GAAGAGTAAAAAAAA           GCATGCGGCT TAA AGCCGCATGC           TTTTTATTTTTTATT 100 36
GII78_RS07875 1511408 .. 1511431 -  -7.4   -4.8048   TTTTCATATCAAAAA          CAGCCCTCTCT CAA AGCG-GGGCTG          TTTTTTTATTTTGAC  83 31
GII78_RS07845 1504930 .. 1504953 - -12.5  -3.61468   GTGCAACGAAACGAA          TGACCAGCC GTATAT GGCTGGTCA           ATTTCATGCTGTGTG  95 42
GII78_RS07840 1504276 .. 1504296 - -16.9   -4.8743   TTTAAAATAAAGAAA            CGGCTGGCA TTG TGCCAGCCG            CTTTTTCTATTAGCG 100 35
       rnpZA NONE
GII78_RS07825 1501199 .. 1501223 - -20.1  -5.08601   TCACTGCAATAAAAA          GAGGCACTCCC TTA GGGAGTGCCTC          TTTTTTTAAACCTCC 100 31
       mreBH 1494650 .. 1494662 -  -3.4  -4.67552   GTGAGGAAAAAAGAA                GCAA GAAAT TTGC                CGCGTGTGAGAATTT  64 53
GII78_RS07790 1494424 .. 1494444 - -11.9  -4.81249   GCCCAAAGTGAAAAA            CCCAAAACG ACA CGTCTTGGG            TTTTTCAATATTATG 100 36
GII78_RS07785 1493078 .. 1493112 -  -9.6  -4.99861   TATGAAGCAGAAAAA    TAAA-AAAAGGAGGC GAAAAA GCCTCCTTTTATTTA     CTTAAAAAGCCCAAT 100 27
GII78_RS07770 1489999 .. 1490047 -   -20  -3.59627   ACGAAATGCGTCAAA CAAAATAAAAACGCCTTGCTGGC CTAG GACAGCA-GGCGTTTTTATTTTG AAAAAGAAGCGACCA 100 18
GII78_RS07685 1472490 .. 1472511 -  -9.5  -5.48623   AAATATAAAGAAAAA           CTGCTTG-GC ATC GCTCAAGCAG           TTTTTTTATTGAGGT 100 31
        mscT 1469307 .. 1469325 - -10.3   -5.1244   TCAGTAATATAAAAA             CCGAAGC AAAAA GCTTCGG             TTCTTTTATTTATTC 100 35
GII78_RS07595 NONE
GII78_RS07590 NONE
GII78_RS07585 1456572 .. 1456599 - -12.2  -4.75174   TATTGAATGTAAAAA        TGCGCTTTTTTC TAAG AAAAAAAGCGCA         TTTTTAACCTGCATT 100 39
GII78_RS07580 1455977 .. 1456024 - -13.8  -3.06915   ACGTATGTTATTGAA TAAATAAAAACAGCCGTTGCC AGAAAGA GGC-ACGGCTGTTTTTATTTT AAAAGTAACTCTCGC 100 24
GII78_RS07570 1454634 .. 1454661 -  -3.5  -5.60993   CTTTTCAGAAAAAAA        GAAGACAACCA GCGATT TGATTGTCTTT         ATTGTATCATGTTCT  84 67
GII78_RS07565 1453313 .. 1453332 -  -9.3  -5.55855   TCCAAAAAAATAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT 100 13
GII78_RS07550 1448059 .. 1448083 -   -13  -5.95539   GGTGAAATAAAAAAA          GATTGCCTGT ACGAA ACAGGCAATC          TTTTTTTTATTATTT 100 35
GII78_RS07535 1444118 .. 1444136 -    -3  -4.76075   ATTAGATGAAGAAAA             GCGCCGTT ATA AATGGGGC             CGTTACGGGATCGGA  68 135
GII78_RS07490 1434739 .. 1434762 - -16.8  -5.08255   ACTCCTAAAATAAAA          CCAGCAGCCT AATC AGGCTGCTGG           CTTTTTATGTATCAA 100 37
GII78_RS07460 1429017 .. 1429032 - -10.4  -5.08824   TTTTTATGTAAAAAA              GCTGCC GGCC GGCAGC               TTTTGAGAAAGCGAA 100 107
GII78_RS07430 1423492 .. 1423514 -  -3.5  -5.64421   ATCCGAAAGAAAAAA           TGCCTAT CTAGAGATC ATAGGCA           TTAAATATTATTATC  84 261
GII78_RS07400 1417081 .. 1417103 - -14.2  -5.75599   GAAAGTATAAAAAAA           GCGGCTTCCT AAA AGGAAACCGC           TGATTGTTATTTTGC 100 32
        motA NONE
        motB 1415124 .. 1415150 -    -8  -5.71638   TAATAAGTAAAAAAA         GGAAGCCTGATA TGT CACAAGGCTTCC         TTTTTTGCTATTTTT 100 33
        kinD 1412945 .. 1412967 - -13.4  -5.49569   CACGAAGATAAAAAA           CCCTCCTGAC ATG GTCAGGGGGG           TTATGAAGCGGATAC 100 26
GII78_RS07365 1411614 .. 1411634 - -16.9  -4.03696   AATAAGCATGAGAAA            GCCCCGTTC ATC GAACGGGGC            TTTTTATATTTATTG 100 35
GII78_RS07335 1405967 .. 1405991 - -18.7  -5.00616   TGTGGCCGTAAAAAA          GCCTCCTTCTC AGA GAGAAGGAGGC          TTAACATCTATGTCC 100 284
GII78_RS07330 NONE
        mtnA 1403617 .. 1403651 -  -9.3  -6.11392   AAAGAAACAAAAAAA    CCGCT-GACTCGGCCC AAAT GAGCAAAGTCCAGCGG     TTTTTTAATGCACCT 100 30
GII78_RS07305 1399373 .. 1399431 - -11.5  -6.01725   AACAAAAATAAAAAA CAAAAATA-AAAAAG-ACCTCTTAGGCGG CGT CCGCTTAAGAGGTGCTTTTTCTATTTTAA ATAAGCATTTTTGCC 100 17
        htpK 1395576 .. 1395595 - -12.8  -5.35224   TGGAGAAAAATAAAA            CCCCGGCC TCTG AGCCGGGG             TGGCGCAGACTATAG 100 35
GII78_RS07275 1395245 .. 1395266 - -12.3  -3.49107   AGCTAAAAATGAAGA           TTCGCCGAG TGCC CCCGGCGAA            TAAAGACCTGAATTT  90 39
GII78_RS07250 1388799 .. 1388821 -  -7.6  -5.02074   TTATGGGTGAAAAAA           GCCGGCGC TGTTATT GCGACGGC           TGTTCAATAATGAAT  89 13
GII78_RS07245 1387829 .. 1387845 -  -4.4  -3.59979   CGGCTGCATGGTAAA              CGCCAT GGGCT ATGACG              TGCCGGAGGCTTTTT  55 18
GII78_RS07240 1385983 .. 1386005 - -12.1  -3.81539   AGTTAAACACGGAAA           GAGCTGACT TCATT AGTCAGCTC           TTTTTCTTCAACTGA  93 19
GII78_RS07225 1382215 .. 1382230 -  -3.2  -5.86965   ACCTATCAAAAAAAA              GACTGA TGCC TCGGTC               AGCACAGTCTTTTTT  88 43
GII78_RS07215 1379957 .. 1379979 -    -2  -4.83169   ATTTTTTTATAAAAA           TCCTATATAC GAG GTAGATATGA           TGAGATTATCGTTTA  66 487
        tnrA 1378858 .. 1378881 -  -8.8  -4.84529   TTATAAACGTAAAAA          GTCCGTCTCA ACTG CGAGCCGGAC           TTTTATTATTTAACG 100 35
GII78_RS07185 1376775 .. 1376792 - -14.1  -4.46615   GATGACTAATCAAAA             CCCCCGC TGCA GCGGGGG              TTTTTCATGATAAGA 100 311
        thiU NONE
GII78_RS07150 NONE
GII78_RS07145 NONE
        thiX 1369526 .. 1369546 - -14.1  -5.84381   TCATCAATAAAAAAA            TCCGCTATC TGT GATAGCGGA            TTTTTTATGATGCGA 100 30
         isp 1367169 .. 1367194 - -14.1  -5.18726   TTCTCACAACAAAAA         GCCTCTTTCCC ATGA GAGAAAGAGGC          TTTTCTACGTAAAAC 100 336
        metE 1364770 .. 1364790 - -11.2  -5.74122   TATTATAGAAAAAAA            CCATCTGC CAAAT GCAGATGG            TTTTTTCAAATTATA 100 36
        guaD 1364130 .. 1364154 -  -9.3  -4.15703   TTGGAGAAATAACAA          GGACCAGGC CGCACAT GCCTGATCC          TTTTAATATTCTTTC  85 28
        ohrR 1362885 .. 1362909 - -14.4  -5.47159   CTGAATAAATAAAAA          GAGGATGCCT GTACA AGGCATCCTC          AATTTTTTTGATGGA 100 24
GII78_RS07055 1355480 .. 1355501 -  -9.5  -3.92869   AACACATACATGAAA           CTCTTCTCC TTTC AGAGAAGAG            TTTTTTATTGAGATA  83 66
GII78_RS07040 1352459 .. 1352469 -    -4  -2.50387   CTTGATAAAATAAGC                 TGTT CAA AACA                 TGAAAAAGGGGAAGA  45 45
         pgl 1351315 .. 1351342 -  -9.2   -5.4659   TAAGATAAATAAAAA        GAGTGGCTCC TTTTTACT AGAGCCACTC         CATTTGTTTATACTT 100 33
        htrA 1339365 .. 1339392 - -15.6  -5.10461   TTTATCTAATAAAAA        GCCTCAGACCGC TTTT ACGGCCTGAGGC         ATTATGTCTTACGAA 100 34
        steT 1332850 .. 1332872 - -13.5  -5.14563   TGTTTCACCAAAAAA           CGGTTCCCT AAACA AGGGAACCG           TTTTATCAGCTTGCT 100 31
GII78_RS06955 NONE
GII78_RS06950 1330943 .. 1330963 -    -9  -5.52384   GTTCCATCAAAAAAA            CCGCTCCT TTGAC AGAAGCGG            TGTGACATTAAAATA 100 33
     spoIISA NONE
GII78_RS06940 1329909 .. 1329933 -  -7.9   -4.0219   TAAGAAAAGGAATAA          GGACAAGAG CTGTTTT CCCTTGTCC          TTTTAGTGTGATCAT  76 37
GII78_RS06935 1329702 .. 1329720 - -14.6  -4.96762   CACAGACCATAAAAA             TCCCGGAG CTG CTCCGGGA             TTTATTTTTTCTTCT 100 27
GII78_RS06750 1301325 .. 1301337 -  -2.6   -5.0065   TAGCGAGAAAGAAAA                GCCC GTATA GGAC                TGGAAAGTAGTGTAG  68 126
GII78_RS06745 1300380 .. 1300397 -  -4.1  -3.86252   CTGGAGGAAAGAGAA             CGGGA TATTGTCG TCCCG              ACGACGTTTCCGCGT  57 307
GII78_RS06730 1298586 .. 1298621 - -16.4  -3.67068   AGGAAAAGCTGTAAA    TGAAAAGACGGAAGCT GTGA AGCTTCCGTCTTTTTA     TCTTACATACAAACT 100 28
GII78_RS06720 1297235 .. 1297248 -  -8.1  -5.28778   ATGATGCATAAAAAA               GACCC TTAG GGGTC                TTTTTTATTTCTTCA 100 30
GII78_RS06700 1293898 .. 1293917 -  -6.5  -5.77853   AAGGCGCAAAAAAAA            GATACCT CTTAAC AGGTATC             TTTTTTTTTGTTTAC  93 42
GII78_RS06695 1292915 .. 1292937 -  -9.2  -4.95547   GCTATAATAAGAAAA           GGCTATCC TTCAAGC GGATAGCC           TTCTTCATTAAATCA 100 33
GII78_RS06625 1276681 .. 1276706 -  -8.3  -4.59342   GGTAGCACAAATAAA         GGAGAACAGGC TTTC ACCCATTCTCC          TGCAGATGCTACGCA  88 34
GII78_RS06620 1275834 .. 1275847 -  -5.3  -4.24623   TTAAAGAGAGAGAAA               GGTAA TCCA TTACC                GAGTGCCTCCCTTCA  67 21
        fetB 1275058 .. 1275081 - -11.8  -5.03945   TAACAAGTACAAAAA          GCCGCTTTTCC CTC GGAAA-GCGGC          TTTTGTCTGTCATTC 100 35
GII78_RS06605 1273842 .. 1273862 - -12.7  -5.36364   GTAAAAACATAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATA 100 34
GII78_RS06590 1270746 .. 1270767 - -13.1  -5.15634   TATTTGACTAAAAAA           GAAAGAGCC TATG GGCTCTTTC            TTTTTTAAAATGTAA 100 30
GII78_RS06565 1264942 .. 1264957 - -10.4  -5.14563   TTGTCCACTAAAAAA              GCGGCT GAAT AGCCGC               GTAGGGTGTTTATTT 100 35
GII78_RS06560 1264465 .. 1264483 -  -3.7  -5.21709   TTCTACATGAAAAAA             GCGTCAC ATACA GCGGCGC             TTTTTGATTCCCAAA  74 10
GII78_RS06550 1263223 .. 1263253 -  -5.3  -4.44667   TTTGTGAACAATAAA       GGCGGCCGGGA GGATGGAGT TCTTGGCCGCC       TCTGGTATGAGGTTA  70 38
GII78_RS06545 1262633 .. 1262662 - -13.7  -3.20126   AAGCGAAATAAATTA       GAAAAGGCTGTCC GTAC GGACAGCCTTTTT        TCTATTTAATAAGAG 100 31
GII78_RS06535 1260703 .. 1260723 -  -4.7  -6.09196   TTTAAAACAAAAAAA           TGGGGAGC TGGACT GC-CCCCA            TTTTGATATGCGGCG  95 42
        cyoE 1259598 .. 1259619 -  -4.4  -5.63517   TTTCCAAACAAAAAA           GAGTCACA TTAATG TGTGGCTC            TTTTTGCATCATCTG  86 34
GII78_RS06525 NONE
GII78_RS06520 1258351 .. 1258371 -  -4.7  -5.63517   GGGGGAAACAAAAAA            GCTTAGTCA TAT CGATTAAGC            TTTTTCCGCATCCCT  88 20
GII78_RS06510 1257141 .. 1257178 -  -3.4   -4.8048   TGCCCAGACCAAAAA   CGGGTAGGAAAATACC GATGTT AATGTGTCCCTACCCG    TTTTTCTGTTCCTGA  67 68
GII78_RS06505 1256457 .. 1256483 - -15.3  -3.89435   GGTAAATAATCCAAA         CAAAAGCAGGC GCAGT GCCTGCTTTTG         TAATTAAGGACTCTA 100 38
GII78_RS06480 1249808 .. 1249850 - -14.5  -3.76839   GAAGCGCAATTGAAA TAAAATAAGGTCCCTTCTCT TTTT AGAGG-GGGACCTTATTTTA TTCATGCATGTTTTG 100 68
GII78_RS06465 1247555 .. 1247571 -  -8.7  -3.65714   AAATCATAGCTTAAA              CCCTTGC GTA ACAAGGG              TTTTTTATTTAGTTA  78 253
GII78_RS06460 1247073 .. 1247085 -  -4.1   -3.9467   AATTAGACATAATAA                GTCAA ATA TCGAC                AGAAGATTGTTACCA  56 35
GII78_RS06455 1246410 .. 1246440 - -15.7  -5.42265   CGAAATTATAAAAAA       TTAAACCCCTTCT GTTGT AGAAGGGGTTTAA       AATTCATTTATCAAT 100 36
GII78_RS06450 1245548 .. 1245571 -  -7.4  -3.86015   TATTTCTTCTATAAA          GCCATCTCTG TATA CAGTGATGAC           CAGAAGCGAGTTAAA  71 461
GII78_RS06440 1244556 .. 1244576 -  -9.7  -5.09762   ATCTTAATAGAAAAA            CCCTTCTCT ATA AGAGCAGGG            TTTTATTTTTTATAC 100 45
GII78_RS06435 1244277 .. 1244297 -    -9  -5.27335   CTTCTTAAATAAAAA           GCCCTTCCC GATT GGGA-GGGC            TTTTTCTCTTATTTA 100 34
GII78_RS06425 NONE
GII78_RS06420 NONE
GII78_RS06415 1241028 .. 1241044 - -12.3  -3.65313   GAATCATAGCTTAAA              CCCTTGC GTA GCAAGGG              TTTTTTACTTTGCCT  93 489
GII78_RS06400 1239577 .. 1239594 -  -2.7  -3.51234   AGGGAAATGCAAATA             TCCTTTT TATA AGAAGGA              AGAAAACCAATTTCC  48 14
GII78_RS06395 1238940 .. 1238962 - -14.9  -5.00616   CGGTTCGTTAAAAAA           GAAGCCGGG GATGG CCCGGCTTC           TTTTATTATTGTTCG 100 31
GII78_RS06380 NONE
GII78_RS06375 NONE
GII78_RS06370 1234566 .. 1234587 - -13.1  -4.76041   TATATGCAGTAAAAA           TCCGGATCT CAAA AGATCCGGA            TGCGTTCAGTCCTTC 100 31
GII78_RS06360 1231847 .. 1231866 -   -15   -4.8048   TTTTTACAGTAAAAA            CCCGGCAG TAAT CTGCCGGG             CTGTTAATGATGCAA 100 29
GII78_RS06335 NONE
GII78_RS06330 NONE
GII78_RS06325 1228791 .. 1228811 -  -8.3   -5.4593   GGAAAATAAGAAAAA            GCAGAGC GTTTTTA GCTCTGC            TTTTAGGTTCTAGAG 100 35
        cotY NONE
        cotZ 1227566 .. 1227593 - -13.6  -2.98823   GCTTTTTTACATAGA        GAAAAGCCTGCA GGCC TGCAAGCTTTTC         CAGCTTATGATTAAT 100 36
        prpE 1217518 .. 1217550 - -15.1  -2.81936   ACATGAGAAAACTGA      TAAAAGGAGAGAATC ATT GATTCTCTCCTTTTT      TATATGGGGCGAAAT 100 25
GII78_RS06235 NONE
        cwlQ 1213303 .. 1213325 -  -6.3  -5.41143   CACTCCGCAAAAAAA           CCAGAGG GAAAGAGCA CCTCTGG           TTACGCGTAATAAGC  89 26
GII78_RS06225 NONE
        spxH 1211750 .. 1211779 -  -7.1  -5.41143   CAGGGCGTAAAAAAA       CAGCCTCAAGCAT ATGC ACGCCTGCGGCTA        TTTTTCACATGATTG  95 23
GII78_RS06215 1211266 .. 1211290 - -12.9  -3.93166   GTCTTAAAAAAGTAA          GCCTGTGCG GAAATGA CGCACAGGC          TTTTTTAAAACCCTT  95 30
GII78_RS06200 1207461 .. 1207482 -  -2.9   -4.3898   ATCATCGTCACAAAA           GCCCAGCTT TCCA AAGACGGAC            AAAAGCTCGAACTGC  60 424
GII78_RS06185 1206273 .. 1206294 - -13.1  -4.30844   ATCGTATCATCAAAA           GAAGGCTGA GTGA TCAGCCTTC            TTTTATTTTTCAACC 100 28
        trpS 1196247 .. 1196266 - -12.2  -5.95166   GTCAACTAAAAAAAA            CCGCTCTT TGCA AAGAGCGG             TTTTTTGATTAGCGT 100 34
        yjzB 1185956 .. 1185975 - -10.8  -4.14147   ACAGAATAAGAAGAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  89 29
GII78_RS06065 1182858 .. 1182880 - -10.7   -5.1861   GTGACCACTAAAAAA           CCCAAAACA ATAAA TGTTTTGGG           TTTTTGGCTTTTTAA 100 37
GII78_RS05995 NONE
GII78_RS05990 1168167 .. 1168193 - -15.2   -4.0098   TTTGAAGTCAAATAA         GAGGCTATGGCG AGT CGCCATAGCCTT         TTTTTATTGCAGTTT 100 29
GII78_RS05975 1165826 .. 1165849 -  -6.1  -5.34309   ATGAGCAAACAAAAA          CAGTCAGGAC ACAGA GTC-TGACTG          TTTTTGTTTGCTCAT  89 37
GII78_RS05950 NONE
GII78_RS05945 NONE
GII78_RS05940 1160565 .. 1160597 - -15.6  -4.37971   AAAATAGCATGAAAA     CGGCTCGC-CTGCAG CAGA CTGCGGAGCGAGCCG      TTTTTTTATGTCTAG 100 37
GII78_RS05930 1158807 .. 1158825 -  -8.2  -6.04953   AGAGAAATAAAAAAA             GTCCTCTT AAG AAGAAGAC             TTTGTCAGTGATTTT 100 270
GII78_RS05925 1156883 .. 1156907 -  -9.3  -4.57341   AATCCCGTTGAAAAA          GACCGCCCGAT TGG ATCAGACAGTC          TTTTAAGGGATTAAT  91 36
GII78_RS05920 NONE
GII78_RS05915 1155489 .. 1155511 -  -9.9  -5.24989   TCAGACAGCAAAAAA           CCGAACAGA AGATA CCTGTTCGG           GAAAAAAGAGGGTTA 100 38
GII78_RS05910 NONE
GII78_RS05905 1153011 .. 1153035 - -10.7   -4.8743   CTCAAAATAAAGAAA          TGGCCCAGCTT AAT AGGCTGAGCCA          TCCCACTTGTAGCGA 100 10
GII78_RS05900 1151843 .. 1151871 -  -3.1  -4.59342   CCGATGACAAATAAA        GAGAAAGCGGC TTACATT GCCGATTTTTC        TGATGAATTTCTTGT  66 449
GII78_RS05885 NONE
         sat NONE
        cysC 1148016 .. 1148031 -  -6.8  -5.56673   ACTCATAAGAAAAAA              CCCGAC ATTG ATCGGG               TTTTTTATATAATTC  93 30
GII78_RS05865 1146312 .. 1146335 -   -11  -3.75461   GAAACTGGCATTAAA          GCGGCA-GCTG AAA CAGCACGCCGC          CTGATGATGTCCTAG  88 48
GII78_RS05855 1144178 .. 1144188 -  -3.2  -4.19238   CCTTCAATTGCAAAA                 GAGT GAC ACCC                 CAAAATATCCTGCCG  59 3
GII78_RS05850 1143595 .. 1143617 -    -7  -5.40072   CTTTCCGCAAAAAAA           GCAAGGAC ATTTTTA GCCCTTGC           TTTCTCTTTTCTCAT  95 15
GII78_RS05830 1138910 .. 1138934 - -10.7   -5.1287   CTGATATCTAAAAAA          CACCCGGCC TTGATTG AGCCGGGTG          TTACGCCATACCTTT 100 26
GII78_RS05820 1137292 .. 1137328 -  -6.1  -4.11346   AGATTTAAATAAGAA   GGATAGAT-GAGCA GGGAAATATA TGCTCTATCTATCC    TTTTTTGTACAACAG  67 67
GII78_RS05810 1134646 .. 1134664 - -11.7  -4.97312   AAAAGTAACCAAAAA             GCGGTGC TCGAT GCACCGC             TTTTTTATTTGCGCC 100 30
GII78_RS05790 1129291 .. 1129307 -  -2.9  -5.16237   AATTTGACTAAAAAA              GCGACAA TTT TTGCTGC              GGCCTTTTTTAATGG  70 49
        yisI 1128805 .. 1128836 -    -8  -2.70354   TTGGGTATAAATTGA      GCGGAAATGCGGC GAAGGAT GCCGC-TATCCGC      CTATGGTGATTTTTG  63 204
GII78_RS05780 NONE
       gerPB 1128127 .. 1128140 -  -3.7  -3.24747   CTTTCATATGATTAA               CGGCC AGGA GGCTG                GAGCGGGACCAATGA  48 8
GII78_RS05770 NONE
       gerPD NONE
GII78_RS05760 1126881 .. 1126895 -  -2.1  -3.86194   AATTGCTGGCATAAA               CGACA CCCTT TATCG               AAGTCTCTGTTTATT  51 39
GII78_RS05755 1126630 .. 1126656 -  -8.8  -4.88129   AAAAATGACTAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCGTTTCCA 100 28
GII78_RS05725 1113846 .. 1113860 -  -5.7  -2.93382   GGGGATATGTACATA               TACCC TGAAC GGGTA               TATCTAACGTTCCAT  52 29
GII78_RS05720 1113394 .. 1113415 - -10.2  -5.27335   CTGTCCAAATAAAAA           GAGGGTTC TTTTTT GAACCCTC            TTTTTTAAACTGCCA 100 30
GII78_RS05710 NONE
GII78_RS05705 1108908 .. 1108940 - -12.3  -3.49951   TATATCTTTATATAA      GAAAAAGAGGTTA TTCATTT TAACCTCTTTTTC      AATCGTAAGTCGTCA  90 168
        ntdA NONE
        ntdB NONE
        ntdC 1104517 .. 1104536 -  -7.9   -4.8048   CCCCTATATGAAAAA            GCAGGAA AGTAAA TTCCTGC             TTTTTTAGTAACTTC  88 54
        glcP 1103135 .. 1103152 - -11.3  -5.63517   TTTTTAAATAAAAAA             CACGCAC TGCG GTGCGTG              TTTTTCGCTTTGTTT 100 161
GII78_RS05655 1099048 .. 1099062 -  -2.8  -3.11341   AAGCGTACTGAAAAT               GATGTC GCA GATATC               GCAGCACATGTCATT  45 164
GII78_RS05650 NONE
GII78_RS05645 1097286 .. 1097323 - -15.3  -3.66178   CCTGTGAACGGTAAA   TAAGAAAAAGCAATCTGG TGT CCAGATTGCTTTTT-TTA   TGCTTAGGCCGCCTG 100 29
GII78_RS05635 1095860 .. 1095892 -   -12  -4.08042   GGTATTAGAAAAATA      GGAAGGAGCTGACC GAACA GGGCAGCTCCTTTC      ATAAAGCTATGCCGT  93 32
GII78_RS05625 1094727 .. 1094747 - -14.1  -5.21236   AACGGATAATAAAAA            GCCAATCCT TGA AGGATTGGC            TTATTCGCTCTGCTT 100 26
GII78_RS05615 1092201 .. 1092220 - -10.8  -4.69464   AAAATATTTGAAAAA            CCGTTCAT TAAA ATGAACGG             TTTAATCGAGATCTA  95 27
       hemAT 1090755 .. 1090774 -  -4.2  -5.54192   ATGAACGCAAAAAAA            CCGGCC GTATGGCA GACCGG             TTTTTGATGGTTATT  84 36
GII78_RS05605 NONE
GII78_RS05600 NONE
GII78_RS05595 NONE
        phoE 1086871 .. 1086900 - -18.1  -5.09762   TGCTAAGAAATAAAA       GAAAAAGACAGGC AAAC GCCTGTCTTTTTC        TTATTTGATAAAGCC 100 26
        aprE 1082552 .. 1082577 -  -9.1  -5.38054   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTACTATTATTG 100 35
GII78_RS05560 1080688 .. 1080720 -   -18  -4.63218   TTTGCCCCAATAAAA      TGAAAAAGCGAAGC GGTTA GCTTCGCTTTTTCA      TTTTCAATCCTTTGC 100 29
GII78_RS05535 1076247 .. 1076277 - -16.3  -4.63089   TATGTGAAAAAATAA       GAAAATCCCACGC GTAAG GCGCGGGATTTTC       GCTCATTACAAATCG 100 31
        gltT 1074691 .. 1074716 - -18.3  -5.32699   TTAAAGATTAAAAAA         GCCTGCGGGGC AAGA ACCCCGCAGGC          TTTTCATTAACCAGA 100 32
GII78_RS05515 1072818 .. 1072844 -  -8.1  -2.62244   TGTTTCAATAAAAGG        TCCAAGC-AGCA GCAA TGCCCGCTTGGA         AAAATGTGAATGGAA  65 78
        fabH 1070899 .. 1070924 - -13.5  -5.38054   CTTCATAAAGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTGTTACATT 100 34
        hmoB 1061371 .. 1061391 -   -14  -4.43307   CTCCCAATAAAATAA            GCTGCCGG ACATG CCGGCAGC            TATTCGACAGCGAAA 100 25
GII78_RS05465 NONE
GII78_RS05460 1059565 .. 1059579 -  -2.8     -2.55   GAATATTTCAACTCA               TGCTGT TTC AAAGCA               TCATCACAGCTGCGA  41 18
        sndC 1058278 .. 1058303 - -11.9  -4.12738   GGATATTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTTATAGCTGA  93 31
GII78_RS05435 1054664 .. 1054687 -  -8.2  -5.18371   GTTCACAAAATAAAA          TAACCTCATC TTAT GATGAGGCCA           GGCGTTTTGCGATAG 100 12
        serC NONE
        trpP 1052771 .. 1052792 - -12.3  -5.40072   CTCTGTTCAAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTGACAATT 100 39
GII78_RS05415 1052010 .. 1052032 -  -6.3  -5.75342   TTCGGCCAAAAAAAA          TACGGGTCCA ATTT TGG-CCCGCA           TTTTTTTCTTTTGAA  91 48
GII78_RS05410 1051111 .. 1051147 -    -3   -5.0916   CTGGCAACACAAAAA   GCGCAAGGATTTGTAAC CTTT GATA-AGCTCCTTGCGC    TTTTTGCCGGACAGC  73 144
GII78_RS05400 1050098 .. 1050110 -  -6.9   -2.5763   ATAGAATAAAATGAT                GGGAG ATT CCCCC                TCTCTCTGAACTGTC  60 117
GII78_RS05395 1049864 .. 1049908 -   -16  -3.39895   GGCTGTACTAATCAA CATAAAAAAGCATAGCTGCT TAATC AGCAGCTATGCTTTCTTTCG TATTTACACTGTAAA 100 29
        prsA 1048489 .. 1048515 - -22.4    -5.626   CATCGCATAAAAAAA         GCTGTGCGGCTC AAT GAGCCGCACAGC         TTTTTTTATTATTTA 100 34
GII78_RS05345 1040313 .. 1040345 -  -5.5  -2.81195   AGAACTGAAAAAAGT      GCTATCCCTTGAGCG CAG CGCCCAAGAGAGAAT      GAGAAGGACCAAGGA  50 119
        khtS NONE
        khtT 1038571 .. 1038581 -  -5.4  -3.82946   CGACTTCAAATACAA                 GATG GTC CATC                 GGGGCTCACACGCCC  63 31
        khtU 1037336 .. 1037357 - -14.5   -4.3179   TGAAAAAACGACAAA           GCAGCACTG ATTA CAGTGCTGC            TTTTTTTATCCCTGT 100 31
GII78_RS05310 1033270 .. 1033291 - -11.7  -4.56133   GGCTAATAAGCAAAA           TCCCTTCTT GGAT AAGAAGGGA            TTTTTTATTCATTCA  95 38
GII78_RS05295 NONE
        yheD 1028945 .. 1028968 -  -8.9  -3.89695   TTTGGATAAAGATAA          GCCCGCTTT ATTAAA AAAGCGGAC           AGGTTACGAAGGCCA  80 29
GII78_RS05285 1028584 .. 1028604 - -11.2  -6.02919   TGAGAAATAAAAAAA            GCTTAGCC GTTTA GGCTAAGC            TAGTCATAAATATGA 100 25
GII78_RS05280 1028149 .. 1028171 -   -17  -4.77173   GGGTGACAAAATAAA           GAGAGCGCGG AAA CCGCGCCCTC           TATAGCCATATATTG 100 46
GII78_RS05275 1027957 .. 1027973 -  -2.3  -3.20028   TTCATTATAAAAGGA              TGTTC TCAGTTT GAACA              GCGCGGGAAAGAATA  43 14
GII78_RS05270 1027265 .. 1027286 - -11.7  -4.63542   CATAACGCTCAAAAA           CCCAAAACA ATCG TGTTTTGGG            TTTTTGGTTTATGTA  95 42
GII78_RS05250 1022517 .. 1022537 - -11.9  -4.45115   ATGAATATAAAAGAA            GTGAGCACA GGG CGTGCTCAC            TTTACAATCAGGACG 100 22
        nhaC 1021018 .. 1021042 -  -7.9  -4.81082   AATGAACGAAGAAAA         GAG-CCCGCT TTTTAC AGCGGGGCTC          TTTTTATTTTTTAAC  88 29
GII78_RS05235 1018995 .. 1019017 -  -9.1  -4.72272   TTTGGGCATGAAAAA           GTGAGCCGC TTTAT GCGCCTCAC           TTTTTTATTCATGAA 100 30
GII78_RS05215 NONE
GII78_RS05210 NONE
        crcB 1014643 .. 1014657 -  -2.1  -4.25283   ACTTGCTGATTAAAA              TGCAGC GCGA GC-GCA               TTCATATGGCTATAT  57 482
        cueR 1011565 .. 1011591 -  -7.4  -3.51329   TATGTCCAATTAGAA         CCTTCACTCT AGCAATG AGAATGAAGG         TAACACCTCCTGTTA  67 53
GII78_RS05185 1010198 .. 1010215 -  -9.9    -5.093   GTGAAAATAAGAAAA             GCACCTT ATAC AAGGTGC              TTTTTTTATTATGCC 100 34
        sigM NONE
GII78_RS05165 NONE
GII78_RS05160 1006372 .. 1006389 - -11.3  -5.63103   GTGTAATGAAAAAAA             GACGCCT GAAA AGGCGTC              TTTTTTAAAAGCCAA 100 30
GII78_RS05150 1004385 .. 1004406 - -11.5  -5.06451   TATCATTTTAAAAAA           CAGGCTCCG TTTC CGGGGCCTG            TTTTTTATTTAATAA 100 34
        citR  997841 ..  997856 -  -4.7  -4.18018   GTTTCTGATGCAAAA              GCGTT AGTCGG AACGC               CATATAAATGGGGCG  64 306
        phoA  995220 ..  995243 -  -9.6  -5.29782   GATATTTATAAAAAA          GAGGATGCAG CGTT CTGCATCCTT           TTTATTTTCCAGTTT 100 27
GII78_RS05105  992090 ..  992111 - -14.5  -5.66868   AAGGAATTAAAAAAA           CATGCACCC AGCT GGGTGCATG            TTATTTGCTTACATG 100 34
        nsrR  991558 ..  991581 -  -5.4  -5.63504   AAGGGCATAAAAAAA          GAAGGAAT CTTAATCT ATTCCTTC           ATTTTTAAAAGCTTC  88 16
        lytF  989919 ..  989943 -   -10   -5.4505   GGCTCTAATAAAAAA          CTGTACAGCC GTTAA GGCCGCACAG          TTTCTGTTTTTAGAA 100 35
GII78_RS05085  989118 ..  989139 - -15.9  -3.93057   CGCAAAAGCAGGAAA           TCCCGGCGT CTAA ACGCCGGGA            TTTGTTTATGTGAGA 100 31
GII78_RS05015  973753 ..  973772 -   -10  -4.67353   CGAGTGACTTAAAAA            GCCG-AGGC AGT GCCTGCGGC            TTTTCTTCATGAAAA  91 32
GII78_RS05000  968727 ..  968763 -  -2.4  -5.51165   AAAATTTGAAAAAAA   CAGTGCGGCATTGGATAG TAT CTATCCAATGC--CTTTG   TTATTAGTGAAGTCC  81 29
GII78_RS04985  966551 ..  966575 - -13.7  -4.43213   CGTAATATATGAAAA          CGTGTAATCCC AAC AGGATTACACG          TTTTTTTAACGGCCG 100 31
        dgcK  963656 ..  963671 -  -2.4  -5.68023   TCAGAAGCAAAAAAA              GCGGGC TTGA ACCCGA               AAAAGCATACGCTAA  86 252
GII78_RS04965  962386 ..  962405 - -12.2  -5.45802   TTGTCAAAATAAAAA            CTGCAGGT TTGC ACCTGCAG             TTTTTCATATCAATT 100 46
GII78_RS04865  945372 ..  945390 -  -8.9  -4.62069   TTTTTATGTGAAAAA             GAACACG GTATT CGTGTTC             TTTTACGTAAGCCAA  90 28
GII78_RS04855 NONE
GII78_RS04850  944350 ..  944375 -  -9.7   -5.4505   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 10
GII78_RS04815  937667 ..  937684 - -12.7  -5.88197   CTAAATAGAAAAAAA             CCCGCTG ATTA CAGCGGG              TTTTTGCATTTCTAC 100 42
GII78_RS04805  935838 ..  935867 - -18.1   -5.5353   TATATCAATAAAAAA       GATGAAGATGGAG AATG CTCCATCTTCATC        TTTTTAGAAAAACAG 100 29
GII78_RS04790  932675 ..  932706 -   -16   -5.5112   TGGAGCAATAAAAAA      GAGACGGCATCTCA TCTT TGAGATCCCGTCTC       TTTTTGTGGTCTTTA 100 64
       spo0M  931526 ..  931539 -  -8.1   -4.9448   ATTTATTAAAGAAAA               GGAGC CGAG GCTCC                TTTTTATACTTACTC  95 35
GII78_RS04675  923103 ..  923131 -   -14  -4.86773   GAAAATCATTAAAAA        TAAGCTGACCGC ACGAA ACGGTCAGCTTA        TTTTATTTCGACATT 100 28
GII78_RS04660  920589 ..  920607 -   -11    -5.626   GATTCCATAAAAAAA             CAGGAGCC CAA AGCTCCTG             TTCAAAGTATCTGAT 100 42
GII78_RS04655  919325 ..  919342 -  -9.1  -5.71712   TTGTATATAAAAAAA             CCCGGCT GTTT AACCGGG              TTACTCTTCTGTTTC 100 26
GII78_RS04625  914915 ..  914934 - -10.7  -3.42346   AAGATGGCAGGAGAA            GCAGCCG CCATCT CGGCTGC             TCCGTAAACCATTCT  80 40
GII78_RS04615  912625 ..  912648 - -14.6  -4.76312   TATAAGACGTAAAAA          GCCCGGCTCT ATAT AGAGCCGAGC           TTTAATTTTTTCTGA 100 10
GII78_RS04580  906261 ..  906281 - -11.2   -4.7339   AATAAAGGGTAAAAA            CAGCTGCA GTGTA TGCAGCTG            TTCTTCTTTACCGTT 100 33
GII78_RS04560 NONE
GII78_RS04555 NONE
GII78_RS04550  902354 ..  902380 - -16.7  -5.22039   CTGAAATGTAAAAAA         CCCCTTGTCTC AAACG GAGACAAGGGG         TTTTTCATTAACGAG 100 33
GII78_RS04525  897515 ..  897538 - -15.4  -5.46698   GGCAAAAGCAAAAAA          GACTCCGTCT AATA AGACGGAGTC           TTTTTTTATTTCGTT 100 31
GII78_RS04515  894264 ..  894293 -  -7.1  -5.95539   TGTCAAATAAAAAAA       GCCTG-CTCCCGCA GTT TGCGGATGACAGAC       TTACAGATTTATTCT 100 34
GII78_RS04510  892257 ..  892270 -  -3.8  -2.88663   AGCCAGCTTGACACA               CCGT ACCGGG ACGG                TGGATGGACCGTTCG  46 389
        padR  889191 ..  889211 - -11.2   -5.0538   TCCGAGCCTAAAAAA            CATCTGCC GTTTA GGCAGATG            TTTTTTTGCATGTGG 100 73
GII78_RS04420 NONE
GII78_RS04415 NONE
GII78_RS04410 NONE
GII78_RS04405  868904 ..  868914 -  -5.4  -2.85606   TTATAGAGGAGGAGA                 GCTT TTA AAGC                 TTCGGATGATTCTCA  52 19
GII78_RS04400  868501 ..  868523 - -14.2  -5.34309   AGGATTAAACAAAAA           TGGCCCGCTT CAT AAGCAGGCCA           TTTTGTTATCCGCGC 100 31
        corA  854586 ..  854604 -  -6.7  -5.55769   GCTTACAACAAAAAA             GAACAGC TGCTC GCTGTCC             TCATTTAAAAATATT  93 26
GII78_RS04335  853611 ..  853646 - -13.5  -4.07568   GCCGTCTTTGTAAAA    GAGAAAAACCTCTCC TTAAAC GGAGAGGTTTTTCTT     TATTTTATACATTCA 100 25
       yfkAB NONE
        mscC  850392 ..  850412 - -10.5   -5.7827   AAGATAAATAAAAAA            CTGATTCCA ACT CGGAATCAG            TTTTTTTGTTTATTG 100 35
GII78_RS04300  847088 ..  847112 - -14.3  -4.49311   ACCATTAGCATAAAA          GCCTCCTGACA TGA TGTCGGGAGGC          TTTTTGATTAAGAAG 100 33
GII78_RS04280  844816 ..  844839 -  -8.8  -5.42265   GGAAATGATAAAAAA          GACTCGCCGA GTTT CCGGCCAGTC           TCCATTATTTACGAA 100 30
GII78_RS04275  843529 ..  843548 - -10.7  -5.74288   AGAAATAAGAAAAAA            CGGACGC TCTTGG GCGTCCG             TTTTTTTGTTGCTTA 100 38
GII78_RS04265  838345 ..  838365 - -16.9  -4.67697   GTTTAAAAGAAGAAA            GCTGCTCGC ATA GCGAGCAGC            TCTTTTTTATGCCTG 100 32
GII78_RS04240 NONE
GII78_RS04235 NONE
GII78_RS04230 NONE
GII78_RS04225  829430 ..  829444 -  -2.8  -4.93877   GTTTATCAAACAAAA               GAAGCT AAA AACTCC               TAGTGCTTTGCTTTG  68 25
        ltaS  825281 ..  825302 - -15.9  -5.63517   CTGTCAAATAAAAAA           GCGGAGAGG GCAA CCTCTCCGC            TTTTTCTTATTTATC 100 32
         map  822973 ..  822992 -  -3.4  -3.62096   TTGGAGGAGGTTAAA            CCTGCCGG AAGC CCGGAATG             TGTTTTACAGTTTCG  50 30
GII78_RS04190  822573 ..  822593 - -15.4  -4.34759   GACAATATCAAGAAA            GCCGGGCG CATAT CGCCCGGC            TCATGTTTTATTGTT 100 33
GII78_RS04185 NONE
GII78_RS04180  822011 ..  822034 -   -11  -5.47159   GTTGAATAGAAAAAA          GCCGCGCA TATCAACG TGCGCGGC           TTTGCCATATTTAAG 100 36
GII78_RS04170  820958 ..  820970 -  -2.7  -3.41602   CCGATCCTATGATAA                CTCAA TCG TTAAG                CCGAACTATTTTTAT  46 52
GII78_RS04120  810060 ..  810073 -  -2.4  -2.59527   GTAACACTATAATAG               CATG GCTTAT CATG                TCAATATTTTTTTAG  40 58
GII78_RS04115  809017 ..  809040 -  -9.6  -3.80855   GGTTGCAAAAACGAA          GAAGCAAGGA TTTC CCCTCGCTTC           TCATTTGTCCTATTT  81 35
GII78_RS04110 NONE
        yfmE NONE
        yfmF  806122 ..  806144 -  -9.8  -3.72395   ATAAGGGAAAATGAA           GGCTGTCACG TTT CTCGACAGCC           CTAGGGAATTCCTCT  84 46
GII78_RS04090  802505 ..  802515 -    -4  -4.15044   CTTTTGGTCAATAAA                 GTAA TGT TTAC                 TTATTAATTAAACAC  58 83
GII78_RS04085  801038 ..  801056 - -11.7  -4.80455   CATCGAAACACAAAA             GGAGGGC AAAAA GCCCTCC             CGTTTTCATCTTCAT 100 41
GII78_RS04070  797614 ..  797633 -  -8.5  -5.16237   AATGGCAGTAAAAAA            CCCGCCC TTCAGC AGGCGGG             TTTTTTTATAAATTA 100 38
GII78_RS04030  788240 ..  788263 - -14.6  -5.31158   TAAAAAAAGGAAAAA          GCCGGCGGGTG AGG CACC-GCCGGC          TGAAAAGAGATTATT 100 36
GII78_RS04025  787461 ..  787490 - -11.6  -4.49556   TTCTTATGAAAGAAA       TACCGTCAGCCTG ATTAG CAG-CTGACGGTA       TTTTCGATATTCAAA  95 10
GII78_RS04020  786109 ..  786130 - -11.5  -5.14965   AGCTGGATTAAAAAA           CCCCCTGCC GCCT GGCAGGGGT            TTTTTCAGCTATGCC 100 30
GII78_RS03980  774232 ..  774255 -    -9  -4.46112   GGTTATCTAAAGAAA          GAGAGAATAC TGAA ATATTCTCTC           TTTTATTATTTTCAA  90 47
        yetL  770679 ..  770700 - -14.5  -5.72622   GTCATAAAGAAAAAA           CAGCCGGAT GCGT ATCCGGCTG            CAGAAGAAAAGACGC 100 69
GII78_RS03940  767852 ..  767871 - -13.6  -5.82172   AGTAACATAAAAAAA            TCAGCCGG GAAA CCGGCTGA             TTATTAAAATGAGCA 100 29
GII78_RS03935  767386 ..  767414 - -13.1  -4.46233   TCAATGTCAAAGAAA        GCGCAGGGCGG AATCGAA CCGCCGTGCGC        AACAGTTTATTCTTT 100 32
        hmoA  766968 ..  766987 -  -8.6    -5.252   GACTCTTAGAAAAAA            GCTTGCAGC AAG GC-GCAAGC            TTTTTATTGATTGTA 100 29
GII78_RS03755 NONE
GII78_RS03750  729263 ..  729299 - -11.9  -2.88236   TAAAGTGAGATGAGA   TAAATCTAAAGCCCTC AATTAA GAGGGC-TTAGATTTA    TTAAGCAGAGCTGGA  84 79
GII78_RS03745  728872 ..  728883 -    -3  -2.73875   CTCTTGGTAATACGA                TAGT AAGA ACTA                 ACTATGAAAACTGTT  41 62
GII78_RS03725 NONE
GII78_RS03720  720366 ..  720376 -    -4  -2.60075   TTTTTTTCAATGAAT                 TTGT AAA ACAA                 TTCTTTCTGATATTT  45 347
GII78_RS03695  711848 ..  711865 -  -9.1   -5.4756   AACGCTAATAAAAAA             GCAGCCC TTAG AGGCTGC              TTTTTTTATGGTCAA 100 37
        opuE  706711 ..  706733 - -14.2  -4.57533   AACAAGAGCACAAAA           GCCACCAAGC TGC GCTTGATGGC           TTATTGCTTACTTTT 100 33
GII78_RS03670  705909 ..  705934 - -13.4  -5.03994   GTGTAGATAGAAAAA         GCCAATGGGA TTCCAG TCCCATTGGC          TTTTATAATGTATCA 100 28
GII78_RS03640  696646 ..  696685 - -13.9  -3.53224   GAGTCTTCTTCCAAA TAAA-AAACCGCCC-TGCC GTCT GGCAAGGGCGGTTTCTTTA  TGAAACAAATTGATG 100 23
GII78_RS03620  693178 ..  693202 -   -13  -5.93809   TGGGCATAAAAAAAA          GCTTGATCAC GTTTT GTGATCAAGC          TTTTCCATTTATCCG 100 34
GII78_RS03610  691330 ..  691348 - -11.7  -4.32651   AATAAGTGAGGAAAA             CCCGCAG AATAG CTGCGGG             TTTTTTGTTATCAAA  91 36
GII78_RS03495 NONE
        gabP  665022 ..  665045 -   -14  -5.14949   AAGAAAATAACAAAA          TCCTAAACGG CAGG CCGTTTAGGA           TTTGATCAGCATTAA 100 37
        cotA  663336 ..  663354 -  -8.9  -5.72622   TTCATAAAGAAAAAA             CTTGCCT GCTAG AGGCAAG             TTTGTCGGGTTATTT 100 35
GII78_RS03480 NONE
GII78_RS03475 NONE
GII78_RS03470  661010 ..  661034 -  -5.7  -4.91573   AAAACAGACGAAAAA          GCCCTAAAC GTTTACA GTTTTGGGC          TTCTTTCTTCGTATT  78 148
GII78_RS03465  660775 ..  660796 - -10.1  -5.20534   ATTAACTAATAAAAA           CCACTCGGC TTGG GCTGAGTGG            TTTTTTTAATGGATG 100 31
        bdhA  657769 ..  657792 - -15.4   -5.1925   GGATAATTTAAAAAA          GAATCCGCAC CCGA GTGCGGATTC           TTTTTGGTTTCAAAT 100 40
GII78_RS03440  654699 ..  654723 -   -10  -4.26589   ATCATACAGTGAAAA          GTCCGGAGTG ATCAG CACTCGGGAC          TTTTTTATTTAGGAG  86 30
        gutR  644587 ..  644620 -   -14  -3.56216   AAGGAATCTATATAA     CGAAAGGCCAACTG CGACTT CAGTTGGCCTTTCC      TATTTATAATAAAGA 100 77
GII78_RS03385  642660 ..  642677 - -11.3  -3.23708   TCGGTTGAAAAACGA             CGCTCCT ATAT AGGAGCG              TTTTTTTATCACTAG  80 37
GII78_RS03375 NONE
GII78_RS03370  639222 ..  639242 -  -6.2   -4.2349   CCTCGATATGTAAAA            CCCTTCTT TATGT AAGAAGAG            TTTTAATTTTATTCA  69 38
GII78_RS03365  638664 ..  638680 -    -8  -5.35222   AAAACCGACAAAAAA              CCCTTG ATTTA CAAGGG              GTTGTCGGCAACGGA  95 324
GII78_RS03345 NONE
GII78_RS03340  635497 ..  635520 - -12.6  -5.64873   GGCAATAATAAAAAA          TCCATTTCTC ATGC GAGAAATGGA           TTTTCTTTATTTCTG 100 32
       abc-f  631284 ..  631303 - -12.2  -4.82901   TTCTGTGGATAAAAA            GCACCTCT AAAA AGAGGTGC             TTGACTTTTTTAATC 100 35
GII78_RS03250  620674 ..  620705 - -20.4  -3.45832   TAATGTCACAATTAA      GAAGGTGCTCAAGA AGTT TCTTGAGCACCTTC       CCACTGGATTAAGCA 100 34
        pbuE  611901 ..  611920 - -10.8  -5.72254   CTAAATAATAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTTTG 100 14
GII78_RS03190  609250 ..  609260 -  -3.2  -2.66216   TTCCATCACGATAAG                 TGCC TCC AGCA                 TAATCATGCATCGGG  43 355
        phoB  606858 ..  606892 -  -7.9  -4.72272   TTCCTCCATTAAAAA     GAGATCCCGTTACTT CATAC AAGCAACGGGACACC     TTGTATTCTTTTATT  88 36
GII78_RS03170  606095 ..  606121 - -19.6  -5.44198   AACAAATAAGAAAAA         GAACTCCCGTAC CTT GTACGGGAGTTC         TTGATTTAAAACTTG 100 31
GII78_RS03150  601662 ..  601678 -  -8.7  -5.97575   AATTCATAAAAAAAA              CCTGACA TGA CGTCAGG              TTTTTTGTTTTATTT 100 39
GII78_RS03140 NONE
GII78_RS03135  598962 ..  598994 - -21.5  -4.65895   CTGGGTACTTAAAAA      CAAAGAGCCCGGAAA ACA TTCCCGGGCTCTTTG      TTTTATTTCCATTCT 100 28
GII78_RS03120  595023 ..  595044 -   -13   -5.0133   TATTTCCCGAAAAAA           GCGGCTCC ATTTAG GGAGCCGC            TTTCTTATGCTTTTT 100 30
GII78_RS03115  593465 ..  593491 - -11.7  -5.14965   ATTTTCATCAAAAAA        CTCCTGCTCTCA TTTT TGAG-GCAGGAG         TTTCGAGTGTTATTG 100 35
        vmlR  591495 ..  591512 -  -9.9  -5.76237   CATATAAAGAAAAAA             GGACAAC AGCT GTTGTCC              TTTTCAATGCCGCTT 100 53
GII78_RS03090 NONE
GII78_RS03085 NONE
        cotP  588079 ..  588089 -  -3.2  -4.37067   CAAATATGAGGAAAA                 TGCG TTA CACA                 CTTGATTATTTAAAT  62 409
GII78_RS03070 NONE
GII78_RS03065  586242 ..  586262 -  -9.7  -4.59944   ATCAGCAGAAATAAA            GCCGCCT GATAAAG AGGCGGC            AGATCGTTATATGTC  91 370
GII78_RS03060  585816 ..  585831 -  -7.6  -5.57054   AATAAGGCAAAAAAA              GAACTC AAAT GAGTTC               TTTTTTTATTCTTCA 100 31
        mneP  581819 ..  581835 -  -7.3  -5.95286   AGCAAAAAGAAAAAA              CTCCTTC TAA AAAGGAG              CTTTTCATTCTTCGA 100 30
GII78_RS03030  580866 ..  580884 -  -5.3  -5.13354   TGCATAAAAAATAAA             CCCTCTA GTTAG TAGAGAG             TCAAGGGAGATCAAA  81 55
GII78_RS03025  580114 ..  580126 -  -4.8  -2.67255   TAACAGAATATTAAC                CTCC TTTGT GGAG                CCGCTTCATTAAAGC  49 34
GII78_RS03020  578939 ..  578961 -  -9.2  -5.06414   TTTGTCCAAGAAAAA           TAGAGTCCAT AAG AGGGACTCTA           TTTTTTGAAATGCCC 100 95
GII78_RS03000 NONE
GII78_RS02995 NONE
GII78_RS02990  572875 ..  572885 -    -4  -3.97356   AAAGCAAAAGTCAAA                 TCTT TAA AAGA                 GTCAAAAGAGAAAAA  57 493
GII78_RS02980  571798 ..  571826 -  -3.2  -5.14563   TGTTTCACTAAAAAA        GAGATCAAGC CTAATGATC GCTTGATCTG        ATAATAACAAGGGTT  73 79
GII78_RS02970  569246 ..  569267 - -11.7   -3.1169   AGAACCTTAAAAGGA           GATACCAAC CGAT GTTGGTATC            TTTTTTGTTTTAGAG  84 35
GII78_RS02935  563659 ..  563682 -  -2.6  -3.34517   ATTTTTGGTGAAAGA          CTTATTTC-TC TGT GATGAAATAAA          GCAAAGCGATGACCG  46 3
GII78_RS02925  562387 ..  562412 -   -12   -4.1347   TCTGAATCACAGAAA         TACCAAGGGT GTCAAA ACCCTTGGTA          TTTTTTCTGGTTATT  93 39
GII78_RS02915  560830 ..  560844 -  -2.8  -2.69468   TAGTTTTACATATGA               GGCA TTCCTTG TGCC               ATTCCCCACTTACAC  41 1
GII78_RS02910  560121 ..  560137 - -10.8  -4.00468   ACGATAACTCAGAAA              GCCCGC TTTTC GCGGGC              TCGATTGAAGCAGAT  89 53
GII78_RS02895  557015 ..  557035 -  -8.3  -5.37043   ATCGCATACAAAAAA            CCAAGGG TTGCTGG CCCTTGG            TTTTTTATACCTTCA 100 74
GII78_RS02885  555574 ..  555605 -  -8.8  -3.05384   TCTTTCGGTATCCAA      TAATACCGAGGGTA TAAC TGCCCTTGGTATTA       TGTTCTGCTGCACCT  70 198
GII78_RS02860  551236 ..  551255 -  -6.5  -5.24796   TCTATAGAAGAAAAA            CAAGCAT AGTAAG ATGCTTG             TTTTTTTCTTAGGAC  86 285
GII78_RS02835  545795 ..  545820 -  -9.1  -4.87626   CGGCAATATCAAAAA         TACCAAGGG TTTTGACG CCCTTGGTA          TTTTTTCTTCAAGAA 100 44
GII78_RS02825  543578 ..  543618 -  -8.4  -3.10878   ATTAGGTCAATAAAT GCCC-TAACGGAGAGAAGT AGTC ACTTTACTCCATTAAGGGC  GGAGAAGTGCTACTG  67 176
GII78_RS02820  542620 ..  542642 -  -9.3  -4.28432   AAGGTTAATTGAAAA           GCAAACTAT ATAAA ATAGTTTGC           TTTTCTTTTTGTTAT  86 37
GII78_RS02815  541102 ..  541121 -  -2.9  -3.46602   TTGTTTACAGTATAA            CATACTG GATTGA CAATATG             CGGAATGTATATAAA  46 525
GII78_RS02770  533197 ..  533217 -  -6.9  -4.96501   TTTCATAAAAAGAAA            CCAGTTC AGATAAA GAACTGG            TTAGAATAAACTCAA  85 45
GII78_RS02765  532074 ..  532086 -  -4.9  -3.61356   AGGAGTTAGTGGAAA                TTATC AAC GATAA                TAGATAAAAGCCAAC  57 237
GII78_RS02745  529431 ..  529446 -  -2.6  -5.23396   AATAAGTAATAAAAA              CTCTTA TCTA TAAGAA               ATAATTCTTGAGGAC  70 156
GII78_RS02740  528668 ..  528696 - -10.3  -4.25283   ATTTTGTGACTAAAA        CTGACCACTTACT TTA AGTAGGTGGTCTG        ATTTGTCCGCAAAAG  90 142
        cmpA  527078 ..  527097 -  -6.4  -5.09259   TATGGTAAAATAAAA            GCACTGCT TACG AGCAGTGT             TTTTTCCTATAGAAA  86 13
GII78_RS02600  513766 ..  513790 -  -5.7  -4.63932   CACGCTGGAAGAAAA         CTGC-CGCCGC CTGCC GCGGCGCGC-G         TTGAAACGCTATTTG  74 421
GII78_RS02570  507105 ..  507132 -  -9.3  -5.26907   GAAGACAAAATAAAA        CATGAACACGA TGTCAC TCATGTTCATG         TTCATGTAGAGCCTG 100 69
        fbpA NONE
        fbpB  505726 ..  505740 -  -7.1  -5.64274   TGAGTCATAAAAAAA               GAGCC TAGCC GGCTC               TTTTTATGTATTGTT 100 29
        dctB  496062 ..  496087 -  -4.7  -2.91582   CAGCGTATCGAGATA         GGAACTATGAA TCTA TTCGCAGCTCC          AACAGTTCCCGGATC  50 4
GII78_RS02505  495129 ..  495151 -   -15  -4.01939   GAAGGCATAATCAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTCTCTTTACTCG 100 34
GII78_RS02480  492351 ..  492364 -  -3.9  -3.87075   ATCACCTCTCATAAA               TGATT TACC AATCA                ATAACCGCTCCTGAT  56 70
GII78_RS02475  492025 ..  492051 - -12.4  -4.96848   GGTCCCATATAAAAA         GACATCGTTTCA GTT CGAAACGATGCC         TCCTGTATCTAATGA 100 48
        mntH  490534 ..  490562 - -13.3  -4.56597   GCTTTTGCGGAAAAA        TAAAAACCGGCTT TAG AAGCCGGTTTTTT        TATCGAAACGTATCT 100 25
GII78_RS02465  490104 ..  490143 - -13.9  -4.74013   TCGAAACAGACAAAA  GGACAAATGCATCTT GTTTCAAAGG AAGATGCATTTGTCC   TTGCATGCTTATTCT 100 74
GII78_RS02405  474966 ..  474988 - -13.5  -4.44667   GGTTTTAATAAGAAA           GGCTGGATC ATAAA GATCCAGCC           TTTTTGCGCTTCCTT 100 39
GII78_RS02375  470358 ..  470393 - -12.7  -4.45083   TGTACATTCATAAAA    GAAGAAGCCCGTCCAC TTTAT GTGG-CGGGCTTCTTT    GCAGTTGCACAGACG 100 7
GII78_RS02350  462496 ..  462515 - -10.7  -4.53303   CAGTTTCATAGAAAA            CGCGCCT CATGAC AGGCGCG             TTTTTTATGTGTGAT  95 425
GII78_RS02300  455164 ..  455187 -  -9.6  -5.85011   GAAAAATGAAAAAAA          CCCTTCACAA CATT TTGTGAGGGG           TTCTATTTTGTGTCG 100 28
GII78_RS02290  453690 ..  453701 -  -5.8   -4.9218   CATTCATGACAAAAA                GAGC GGCC GCTC                 ATTTGTCAAACGTTT  78 395
        ycnK NONE
        ycnJ NONE
GII78_RS02245  445561 ..  445587 - -11.6  -5.95539   GGTTAAACAAAAAAA         GCGACCCAGACA TCA CATCTGGATCGC         TTTTTTATTACGCAC 100 33
        gabR  439250 ..  439276 -  -2.3  -5.85244   AAGCAAAAGAAAAAA        CGTGCAGCACCT GTGC AGATG-TGCAGG         TTGCCAAATCGACTT  91 197
GII78_RS02210 NONE
        nfsA  437904 ..  437928 - -17.9  -4.06055   ACCGGGTAAATGAAA          GGCCTGCCGGA AAA TCCGACAGGCC          GAATAAGAGCTTATT 100 36
GII78_RS02200 NONE
GII78_RS02195  435432 ..  435461 - -16.7  -3.06509   TTTTAAATAATTATA       TAAAAACAGCCCT GAAC AGGGCTGTTTTTA        GCGTGCCGGCTGCTG 100 23
GII78_RS02165  428851 ..  428872 - -15.9  -5.71712   GGTGATATAAAAAAA           TAGCGGGCG CTGC CGCCCGCTA            TTTATGTACGATTAA 100 37
GII78_RS02160  428580 ..  428592 -  -3.4  -4.12942   GCAAATGCTGCAAAA                CTGT GGCGG ACAG                GGTCCCGCAGAGACG  57 50
GII78_RS02155  428396 ..  428420 - -18.7  -5.40072   TTCTTTTCAAAAAAA          CACCGCAAGAC ATA GTCTTGCGGTG          CCGCCTTCATGGAGA 100 51
GII78_RS02130 NONE
GII78_RS02125  422362 ..  422404 -  -7.8  -5.65513   GAGGAAGCAAAAAAA TGATAAAAAGAGCGGGGG GATGCGG CCGCCGCTCTTTTTATGT TCACTTCTATATAAA 100 90
GII78_RS02105  418016 ..  418033 -  -2.5   -5.0133   TATCGTCTGAAAAAA             GCGCCCC TCTA GGGGTTC              TTTTTTTTCGATTTA  68 16
GII78_RS02095  414463 ..  414490 - -17.8   -5.5112   TTGATCAATAAAAAA        CAGCCCGCAGAT CAAC ATCCGCGGGCTG         TTTCTGATTATAAGA 100 33
        bsdA NONE
        tcyA NONE
        tcyB NONE
        tcyC  407392 ..  407432 - -18.7  -4.12902   CAATCACGCTGAAAA  TCACAAAATCCTAAAACGA AAA TCGTTTTAGGATTTTGTCA  ATAATCTGAAACAGG 100 64
GII78_RS02045  406482 ..  406500 -  -9.6  -6.14618   GAGAAAATAAAAAAA             CAAAGCCA AGG CGGCTTTG             TTTTAGTGTACAGGC 100 28
GII78_RS02040  405592 ..  405607 -  -4.7  -5.14477   CATAGACTGAAAAAA              CAAGG GGTTCT CCTTG               AGGCGATAGACCGTC  77 142
GII78_RS02030 NONE
GII78_RS02025  402705 ..  402739 - -13.8  -3.10975   ACCCACCATTCAATA     TAAAAGGATCAGCACT GTC AATGCTGATCCTTTTT     AAATTTGAGTTTTTT 100 8
        hxlA NONE
        hxlB  372840 ..  372860 - -16.9  -5.49579   TTAGAAAAAATAAAA            CCGGCCTGA TCT TCAGGCCGG            TTGTGTGATGCTATT 100 36
GII78_RS01980  371039 ..  371057 -  -5.3  -2.59458   AATGATAGTAAGTCA            TC-AGCCG TTTT CGGCTTGA             TTAATCATTTTAAAT  51 7
        nucA NONE
         nin  369965 ..  369989 -   -10  -2.73034   AAAGTTTATAAAGAG          TCCCTGAGAG TTATT CTCTCAGGGG          TTTTTCATTACACAG  74 33
GII78_RS01945  366273 ..  366289 -  -5.1  -3.02946   CGTCCAATTACAAAT              CAACGTC CTG AACGTCG              GCATCAATTTTTTTT  52 1
GII78_RS01940  365534 ..  365553 -   -10  -5.82172   ATCAATAGAAAAAAA            GCCG-TCCC CTG GGGAGCGGC            TTTTTTTAATGAAAC 100 47
        nasB NONE
        nasC  356437 ..  356447 -  -2.6  -4.66264   GAAAAGTTCTAAAAA                 TTTT ATG AAAA                 ATTTAAATGGGTCTG  62 28
        nasD NONE
        nirD  353529 ..  353549 -  -7.6  -3.93769   ACTGTAAAAAATGAA            GGACCACT AGAAA AGTGATCC            GGTCTTTTGATCAAT  74 36
        cobA  352019 ..  352040 - -10.2  -5.05113   GGTACATAAATAAAA           CAGCCCTT GGGGGA AAGGGCTG            CCAGCCATCAGCTGT 100 33
GII78_RS01880  349883 ..  349902 -  -3.6  -3.94438   CAGCTGAAGAAAAGA            TGATTGTG CTGT CACAATAA             AACCTCCGCTCATGT  56 120
GII78_RS01875 NONE
GII78_RS01870  348119 ..  348142 - -12.6  -5.88476   AAAAGAAATAAAAAA          GAAACCAGTA CTTG TACTGGTTTC           GTCTTCACTTAAAAT 100 34
GII78_RS01830  338745 ..  338763 -   -16  -4.66609   CAGCCGATGTAAAAA             GCCGTGCG CAG CGCACGGC             TTTTTTTATCGTTTT 100 31
        tmrB  337271 ..  337289 -   -16  -4.22591   AATAAGTTGAAGAAA             GCCCGCTC TCG GAGCGGGC             TTTTGTCGTGTACAG 100 46
GII78_RS01805  333868 ..  333887 - -13.6  -3.30412   AAGACGAAAAAGAAT            GGCCGGAA GACA TTCCGGCC             GATCCCGAGCAATAT 100 384
GII78_RS01785  330561 ..  330585 - -17.3  -5.47159   GTGTAATAGAAAAAA          GCAGTACATGC CCA GCATGTACTGC          TTTTTTATGTTAATT 100 35
GII78_RS01755  322144 ..  322163 - -13.6   -4.0386   TAAATAATGGAGAAA            GCAGCCTG TAGC CAGGCTGC             TTTTTTGCGTTAAGA 100 35
GII78_RS01735  318549 ..  318563 -  -4.2  -4.61868   TATGTATAGAGAAAA               CCCTTT GTT AGAGGG               TTTCCAAAAAGCCAG  68 18
GII78_RS01730  317237 ..  317281 - -19.7  -4.12902   CAATCACGCTGAAAA GATGACAAAATCCTAAAATGA AAA CCATTTTAGGATTTTGTCAAC AATCTGAGGCACCTC 100 59
GII78_RS01690  308952 ..  308975 -   -14  -4.46656   CCGATAACATGAAAA          GCAGTTTTCC CTAG GGAAAACTGC           TTTTTTTATAGAAAT 100 31
        cwlK NONE
GII78_RS01640 NONE
GII78_RS01635  297502 ..  297526 -   -13  -5.27938   ATTTTTAAATAAAAA          GGAAATAGCC GTCAA GGCTATTTCC          TTTTGGTGTTTTATT 100 36
        natR NONE
        natK  292685 ..  292709 - -15.9  -5.68023   TCATAATGAAAAAAA          CCTTGAAAAGC CGG GCTTTTCAAGG          TTTTTTTATTTCTGA 100 31
GII78_RS01600  290956 ..  290980 - -14.5  -5.34655   TAATGAAAAACAAAA          CCTTGAAGAAT GCT ATTCTTCAAGG          TTATTCTGCTTTCAG 100 26
        lmrA NONE
      lmr(B)  286723 ..  286745 -  -4.8    -4.946   AGTAAACATGAAAAA           TCCCCTGA ACATTAG TCAGGGGC           TTTTCATATTAATGA  76 34
         pcp  284863 ..  284873 -  -8.2  -3.70709   ATGAGGGAAGAAACA                 GCGG CGG CCGC                 TTAGTGCAGCGTACC  74 26
GII78_RS01535 NONE
GII78_RS01530 NONE
GII78_RS01450 NONE
GII78_RS01445  260792 ..  260830 - -11.1  -4.86939   CAATAAACGCAAAAA   GAGAAAGGTGTTCAGCC CATAT GTCTGAACACCCTTTTC   TTATGATATTTGTTT 100 26
        mmuM  259687 ..  259711 -  -9.4   -5.4505   CTTCCTAATAAAAAA          TCTCATGTCA GAAAG TGACACGAGA          CTCCGGCGAACCGGC 100 74
        mmuP  258202 ..  258223 - -14.5  -4.87318   GTGAAAATCGAAAAA           GAACCTGCC CGGA GGCAGGTTC            TTTTTATTTTGAATG 100 29
        nagB NONE
GII78_RS01405  252985 ..  253005 -  -9.7  -4.57073   TATGTTGGCGAAAAA            GTCCCCC GCAGCAG GGGGGAC            TTTTTTACTTCATTT  91 30
GII78_RS01400  251591 ..  251613 - -12.1   -5.7946   TGCTGAATAAAAAAA           GAACACCTC GTATT GAGGTGTTC           TTTTTTTCTATATGC 100 33
GII78_RS01345 NONE
GII78_RS01340  242225 ..  242244 -  -8.6  -6.14618   GACAAAATAAAAAAA            TGGATGCC GTTA AGCATCCA             TTTTACATCCGTTCT 100 15
GII78_RS01335  239942 ..  239970 - -14.7   -3.9461   CTTTTTTAAGAAGAA        CTCCATGAATCCC TAC AGGACTCATGGAG        AAACAATATTATTTA 100 34
GII78_RS01330  239468 ..  239499 -  -3.8  -3.90286   GAGGACAAAGGGAAA      GCATCTCTGATT TCGAGATT ATTCAAAGATGC       TTTTTTTGTATTTTT  56 12
        glpT NONE
GII78_RS01305  234304 ..  234325 - -10.2  -5.10765   AAATAAATAAGAAAA           CCTTGCGA TAGTTG TCGCAAGG            TTTTTTGCTTTTAAT 100 36
GII78_RS01295  232110 ..  232134 - -10.1  -5.01042   AAGTTAAATTAAAAA          GCTCTCTTC CTTTATC GAAGAGAGC          TTTTTGATTACTTCT 100 33
      blaOXA  229841 ..  229869 -  -7.3  -2.82516   GTTTTGAGCATGAGA        TTTAGAGCCCTGC CGT GCAGGGCTCTTTT        ATTTAGGATGTAATC  61 28
GII78_RS01260  225381 ..  225398 - -12.7  -5.56673   ACGGAGAATAAAAAA             GAGCCGG ATAA CCGGCTC              GGTATAAGTTAAAAC 100 34
GII78_RS01255  224168 ..  224182 -  -4.2  -2.81642   AGATTATTGAGGATA               CATGCA GGC TGCTTG               CGATTACTTATGAGC  45 394
        alkA  201918 ..  201930 -  -4.1  -3.90318   TTAGCATGCTAGAAA                TCCGA AAA TCGAA                GAGCCTATTGGAATG  56 175
GII78_RS01085 NONE
GII78_RS01080 NONE
        murQ NONE
GII78_RS01070 NONE
GII78_RS01065 NONE
        amiE  187907 ..  187919 -  -4.1  -2.56011   TAAGCGGAAAGACAG                GTCTC ATA GAAAC                TTCCTCCTATCGTCT  45 47
        nagZ NONE
GII78_RS01050  184650 ..  184675 -  -9.1  -5.55664   TTAGCATGAAAAAAA         CCCTTACTTAT GTGT AAAAGTAAGGG          TCTTTCGTTCAGTAA 100 77
         btr  182925 ..  182952 -  -2.9  -3.42083   TGAACAGATATAACA        CCATGGACAAAT TCCTG ATTTAT-CATGG        ACAATCTCCGGATAG  46 20
        feuA NONE
GII78_RS01035 NONE
GII78_RS01030 NONE
GII78_RS01025  179124 ..  179143 -  -9.3  -5.75599   GAAAGCATAAAAAAA            CCGCTCA TAGGGT TGAGCGG             TTTTTTCCGTATAGC 100 10
        pdaB  159120 ..  159134 -  -2.8  -3.23921   TATAAAGCAAAAGCA               GTCCTC TAA GAAAAC               ATTTGTGTCATCGTT  45 186
        gerD  157998 ..  158028 -  -7.5  -4.42653   AGTGCAGGTATAAAA       GGTGAACCGGGAT TCCAG ATCCCGGCTTTCC       CTTTATTCACTTTCT  82 28
        abrB   44319 ..   44342 -  -9.7  -5.87996   TAAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTACAAGAA 100 45
GII78_RS00115 NONE
GII78_RS00110   23447 ..   23471 -  -7.2  -5.52384   CCCCCATGAAAAAAA          GACGTTTCCA AATTA TCGAAACGTC          TTTTTGACAACATTA 100 13
GII78_RS00105 NONE
GII78_RS00100   22069 ..   22090 - -11.7  -5.28942   TATTTTAAAGAAAAA           GTGAATCTC GACT GAGATTCAC            TTTTTTTGATTATCA 100 22
GII78_RS00065   14408 ..   14426 - -14.6  -3.69434   CCAAGCAAGTTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTGTTAA 100 37
