        rlbA NONE
        recF NONE
        remB NONE
        gyrB    6384 ..    6409 + -10.6  -5.24129   ATCTAATCATAAAAA         GCCTTATTTC CAATAA GAAATAAGGC          TTTTTTCTGAACAAG 100 35
        gyrA    9057 ..    9077 + -13.3  -5.39721   GAAGTGTGAAAAAAA            GCGCAGCTG AAA TAGCTGCGC            TTTTTTGTGTCATAA 100 32
GII90_RS00040   11026 ..   11038 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 96
GII90_RS00045 NONE
GII90_RS00050   11278 ..   11288 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  70 85
GII90_RS00055   14261 ..   14278 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   14408 ..   14426 + -14.6  -5.80003   CCAAGCAAGCTTAAA             CCCAGCTC AAT GAGCTGGG             TTTTTTGTTTGTTAA 100 35
        guaB   16997 ..   17021 +  -9.3   -5.9873   ACAAATTAAAAACAT          TTGACAGGGTC TCT GACTCTGTCTA          TTTTTTTTATACTGA 100 50
GII90_RS00075   18467 ..   18490 +    -6  -3.63068   TTTAATCAATTGAAA          GAGCTCTGAT GGAT GTTAGGGCTC           TTTCGCGTAATATAC  61 36
        pdxS NONE
        pdxT   20398 ..   20429 + -15.2  -5.48213   AGGGTGGCAACGCGA      GAGCTCTCGTCCCT TTAT GGGGATGAGGGCTC       TTTTTATTTTCGATA 100 274
        serS   21759 ..   21780 + -10.1  -4.96646   CGTAAATTATGGAAA           GGCGTGCCT GACA AGGTGCGCC            TTTTTGCTTATGTAA 100 36
GII90_RS00095   22026 ..   22048 +  -8.4  -5.79595   TTGGAGATTGTTTTG           TCCGTTGCAT TCG GTGCGGCGGA           TTTTTTATTTTAAAG 100 76
GII90_RS00120 NONE
         ffs   26300 ..   26319 + -10.8  -5.60689   CATCAAATTTTCAGA            CTCACCTA ATAT TAGGTGAG             TTTTTTGTTATGTAA 100 50
        dnaX NONE
GII90_RS00135 NONE
        recR NONE
GII90_RS00145 NONE
        bofA   29679 ..   29694 +  -3.2  -5.00616   ATTCTAATATACGTC              GCTGAT GACG AACAGC               TTTTTTGAAAAGAAA  70 78
GII90_RS00155   31494 ..   31506 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 96
GII90_RS00160 NONE
GII90_RS00165   31746 ..   31756 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  70 85
GII90_RS00170   34805 ..   34823 +    -6  -4.49556   GTGAGAAACGCCCAG             TACCTTCA TCC TGAAGGCA             TTTGTTTGGTGGCGA  73 131
         rrf   34953 ..   34971 +   -11  -5.68438   CCAAGCAAGCTTAAA             CCCAGCTT AAT GAGCTGGG             TTTTTTGTTTACTCA 100 35
        csfB   35316 ..   35329 +  -6.7  -5.70829   GCCATTATATTCATA               GACCT GAAA AGGTC                TTTTTTTGTACTCTT  93 25
GII90_RS00185 NONE
GII90_RS00190   37233 ..   37245 +  -4.8  -2.89511   AAGGAAAGATGATTA                CCAG TAAGT CTGG                CTTTAAGTTCTGTCA  50 29
GII90_RS00195 NONE
GII90_RS00200   39368 ..   39382 +  -2.9  -3.38218   GTGATCGATGAAGCG               TTGAA AAAAA TTCAA               TTGTGACCTGTTTCC  46 5
        darA   39769 ..   39785 +  -3.7  -4.13014   TATTTGTCCTTCCAG              TCGATGA ATT TCATCAA              TTTTAAGGATCTGAA  58 3
GII90_RS00210 NONE
        holB NONE
GII90_RS00220 NONE
        yabA   42456 ..   42478 +  -8.4  -4.58663   AAAAAATAGGGAAAA           GGCTTCCG CATAAGA CGGGAGCC           TTTTTCAAAGGTACT  88 32
GII90_RS00230 NONE
GII90_RS00235 NONE
        rsmI   44396 ..   44419 +  -9.7  -5.24129   TAAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTACAAGAA 100 31
        metG   47226 ..   47267 + -10.3  -3.34398   TTAAATAATGATAAA CAAAAGGTGTTTCACGTGT AACA ATTCGTCGAACACCTTTTG  TGTTTCGACAAGAAA  80 33
GII90_RS00255   48136 ..   48154 +  -3.8  -3.86524   AGTTCTACATGCTTT             CTTCTCCT CAT AGGATAGG             TTTGTCGACAAGTCT  56 97
GII90_RS00260   49550 ..   49570 +    -9  -5.68023   ATATACTTATGTATT            CAGAGGGT TTTGC GCCCTCTG            TTTTTTTCGTTATAA 100 42
        rnmV NONE
        rsmA   51098 ..   51115 +  -9.9  -5.45802   AACGGATTGTATAAA             GCCCTTT TCTA AAAGGGC              TTTTTGTTTTGCGCA 100 14
        prtG   52154 ..   52176 +  -9.9  -5.80951   ATTAACAGTTGAAAA           CCTGCATAG GAGAG CTATGCGGG           TTTTTTATTTTACAT 100 36
GII90_RS00280   52618 ..   52640 +  -8.5  -5.46706   GTGGCATTTTAACGG           GCAGTGAAC CTTTT GTTTACTGC           TTTTTGTTTTGCCCT 100 29
GII90_RS00285   52969 ..   52991 +  -9.8  -6.09196   CGATAAGGATGTGAC           CCGGGGGACG TGC TGTTCCCTGG           TTTTTTTATTTTGGA 100 35
GII90_RS00290 NONE
        purR NONE
GII90_RS00300   55272 ..   55296 +  -8.6  -5.67283   GAAATAATAAGAAAA          GTGATTCTGG GAGAG CCGGGATCAC          TTTTTTATTTACCTT 100 34
       spoVG   55769 ..   55810 +  -5.3  -5.33848   ATAACCAAAAAGCAA GGACTGCTG--AAAGGGCT GACATA AGCCTTTTGCCGGCGGTCC TTTTTTAATTCTGAT  86 44
        glmU NONE
GII90_RS00315 NONE
GII90_RS00320   58997 ..   59021 +  -7.9  -4.46926   ACAATAATAGCTTAA          GGCGTAACC CTCCCGC GGTTACGTC          TTTTGTGCTAGAATG  82 34
GII90_RS00325 NONE
         fin   59954 ..   59982 +  -8.9   -5.1523   ATTTATTCAATAAAA        AGCTTTGGTGTAG ACA CTAGACCAAAGCG        TTTTTCTGTTCTCGC 100 28
         mfd   63572 ..   63582 +    -4  -3.83205   TTTGTTACTCTCTGG                 TGTA TAT TACA                 TTTGATGTGACGGAT  56 43
       spoVT   64261 ..   64286 +  -9.1   -4.7497   AAATAGGTATGTAAA         GAACAGC-TCTC CTT GGGACGCTGTTC         TTTTTCATGCGTGCC 100 60
GII90_RS00345 NONE
        mazG NONE
GII90_RS00355 NONE
        yabP NONE
        yabQ NONE
       divIC   69148 ..   69165 +  -3.5  -2.90075   GTAGCCTTGTTGACA             CTTAAAT TTTT ATTTAGG              TATAATTAAGCAAAC  44 37
GII90_RS00375   69631 ..   69654 +  -8.9  -5.58179   TATAAAATAAATGAA          GCATCCGTT CATCCC GACGGATGC           TTTTTTATTATCCTC 100 53
GII90_RS00380 NONE
GII90_RS00385   69940 ..   69962 +  -8.5  -5.85011   GGTCATCCTAACAAA           TCGGTTTCT CTTGC AGAAGCCGA           TTTTTTTCATTTTTA 100 33
      spoIIE   72664 ..   72675 +  -2.2  -3.21276   GGGAATATATGAATC                TGAG AATC CTCG                 TATTCTCCAGGAGGA  43 77
GII90_RS00395 NONE
        prkT   74475 ..   74486 +    -3  -3.61356   GGTTGAAAGTGTTAG                GATA TGAA TATC                 TTTAAAATACCTGCT  48 84
        tilS NONE
         hpt NONE
        ftsH   78510 ..   78529 + -11.4  -5.72616   TTCTTTCTAAAAAAA            CTGCCGGC TGAC GCTGGCAG             TTTTTTTATGTAAAT 100 47
GII90_RS00420 NONE
        hslO   80339 ..   80359 + -11.9  -4.98531   TTCGTGACCAAACTA            CCCGCTAAG CTC TTTAGCGGG            TTTTTAATTTGAGAA 100 18
GII90_RS00430 NONE
        cysK   82301 ..   82318 + -12.7  -5.88197   TAAAAAAAGCCAAAA             CTCCCGG TTCG CCGGGAG              TTTTTTTATATTTCG 100 38
GII90_RS00440 NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
GII90_RS00470 NONE
        dusB   88250 ..   88270 +  -5.4  -5.14894   TCTATTTGCTGCTCA            CTGCTAGT TTTAC GCTGGCAG            TTTTTCTGCTTTTTT  81 49
        lysS   89825 ..   89858 + -10.4  -4.68424   AACGCTAATAAAAAA     GAGCGGTATCCT CCATAGGGAA AGGATGCCGCTC      TTTTTAAATCCCTTA  95 33
GII90_RS00485   91743 ..   91768 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII90_RS00490   94806 ..   94823 +  -8.5  -4.49556   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   94946 ..   94961 +  -7.6  -3.31322   GACGCCGCCAAGCAA              TTGCAC GTTA GTGCAA               TTATGGAGGATTAGC  67 28
GII90_RS00500 NONE
GII90_RS00505 NONE
GII90_RS00510 NONE
GII90_RS00515   95361 ..   95372 +  -2.2  -3.09516   AACTGGACATCCTGT                CTGC GGAA GTAG                 TTCAGTGGTAGAACA  42 64
GII90_RS00520 NONE
GII90_RS00525   95527 ..   95537 +  -2.4  -3.95435   TGCCGGTTCAAGTCC                 GGCC CTC GGCA                 TTATGTTTTGCGCCC  51 15
GII90_RS00530 NONE
GII90_RS00535 NONE
GII90_RS00540   95966 ..   95982 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 179
GII90_RS00545   97599 ..   97624 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII90_RS00550  100662 ..  100679 +  -8.5  -4.49556   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  100809 ..  100827 + -14.6  -5.63645   CCAAGCAAGCTTAAA             CCCAGCTC AAT GAGCTGGG             TTTTTTGTATTTTGG 100 35
        ctsR NONE
        mcsA NONE
GII90_RS00570 NONE
GII90_RS00575  105611 ..  105641 +  -9.9  -2.89602   TATAGAAGACGGAAA       TGAGGCATACA GCATGTAAG TGTATGCCTCA       CTTTCATATCAAGAA  75 41
        radA NONE
        disA NONE
GII90_RS00590 NONE
GII90_RS00595 NONE
GII90_RS00600 NONE
GII90_RS00605  112312 ..  112342 + -14.9   -5.8187   AACCGCGCGGTTAAA      GCGTCTCTGTCATG TTTA CATG-CAGAGACGC       TTTTTTTATTGGGTA 100 248
        cysE NONE
        cysS NONE
GII90_RS00620 NONE
        rlmB NONE
        rae1 NONE
        sigH NONE
        rpmG NONE
        secE  117350 ..  117362 +  -6.9  -5.56673   TATTACTTGCCAAAA                CCCGT TCA GCGGG                TTTTTTATTGTGGCT 100 73
        nusG NONE
        rplK  118621 ..  118650 + -13.7  -3.72027   AATTTGTTTCTTGTC       GGGTTGCGAGTTT TAAC AAGTTCGCAACCC        TTATTCGTGGGAGGT 100 39
        rplA  119551 ..  119571 + -15.5   -4.9792   ATGCTTGTATATACA            GCCTCCATG TCT CATGGAGGC            TTTTTATATGGAATC 100 176
GII90_RS00665 NONE
        rplL  120592 ..  120612 +  -9.7  -5.29846   TTACCTGTAGGGGAA            GCTCGCTTT TAT GAGGCGAGC            TTTTTCTTTGCCATT 100 48
GII90_RS00675  121400 ..  121420 +    -4   -5.8901   TTTGTTTTTGGATGT            GGTTTTCT TAATT AGAAACCC            TTTTTTCTTTTGTCT  90 161
        rpoB NONE
        rpoC  128759 ..  128802 + -14.1  -3.86346   GTTGAATAACTGATT TAACTCTGCTGAAAGACTG CAAAAA CAGTCTTTCAGCAGATATA TTTATGAAAAAGTCA 100 32
GII90_RS00690  129188 ..  129222 +  -8.8  -4.68528   TTTATAACGTACTTT     TGTTTTTGCGTAAGAT TCC ATCTTGTGTAAAGACA     TTGTTTTTTGCCTTT  90 34
        rpsL NONE
        rpsG NONE
        fusA  132403 ..  132420 +  -8.5   -3.2918   TTGTAAGATGAGGAA             GTGAAAG CTTT CTTTCAC              TTCCTATCACTCTAT  70 75
         tuf  133679 ..  133698 + -13.6  -5.72053   TAGTATGGTTTTAAA            CGAGACCC CTGT GGGTCTCG             TTTTTTGTTTGCTTA 100 41
GII90_RS00715  134870 ..  134901 +    -5  -4.82901   GAGGTTGCTGACACA      CCCGGCCGCTTTGC CATG GCAAGGTGTTCAGG       TTTTTCTCACGGAGA  74 177
        rpsJ  135253 ..  135263 +  -2.6  -3.34962   GTGTCGATATCGAAA                 TTAA ACT TTAA                 TTCTAAAATATAGAA  46 15
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY  145413 ..  145438 + -10.5  -3.14132   ATTTATGAAAAACTA         GAGGAAATGGA TTTA TCCATTCCCTC          TTAATAAAGAGAGGA  79 25
GII90_RS00830 NONE
         map NONE
GII90_RS00840 NONE
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK  148458 ..  148491 +  -5.4  -3.66666   CTAAACAATGGGGAA     TTTCGGATGGAATC TCATAT GATTCTATTCGAGG      TTTCGACGTTTTGAA  60 138
GII90_RS00865  149467 ..  149487 +  -4.7  -2.55002   CGCAAAGACGATTGA            CTAGTTTCC CTT GTGAACTAG            GATTTTCGTGTGTTT  49 26
        rplQ  149887 ..  149900 +  -3.9  -2.85346   ACGGAGCACCAATGG               CAATT ATCG AATTG                GTTTAATCACATATT  46 6
GII90_RS00875 NONE
GII90_RS00880 NONE
GII90_RS00885 NONE
        truA  153323 ..  153333 +    -4  -3.34398   AAAGTTATAAGATAT                 CATA TGG TATG                 TATTTCAACCCCACG  50 77
        rplM NONE
        rpsI  154301 ..  154323 +   -12  -5.65927   TTACGTTTTCAAAAA           GCTCTCGACC TTG GGTTGGGAGC           TTTTTTCTTTCAATA 100 43
GII90_RS00905  155518 ..  155541 +  -3.1  -5.14563   GTGAAAGTATGAAAA          GCAGCGACCT GTTAG AGGG-GCTGC          TTTTTTCATAACCAA  73 29
GII90_RS00910 NONE
        cwlD  156904 ..  156923 +  -7.1  -4.85396   CACAGAAAAAGGAGA            CCCTCCG GAGTAA TGGAGGG             TTTTCTTGTGGTTCT  83 13
        salA  158079 ..  158097 +   -11  -2.95234   GGTATAAAAGGTGAA             CCGGGATT CCA GATCCCGG             CTTTCCCTTTATTCA  79 34
GII90_RS00930  159520 ..  159534 +  -4.2  -3.40639   ATGTAAAAGAATAAT               GTCTCC ACC GGAAAC               TTGCTTGGTCACATT  50 176
GII90_RS00940  162100 ..  162125 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII90_RS00945  165163 ..  165180 +  -8.5  -4.49556   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  165292 ..  165302 +  -2.4  -3.21235   TGTGAGAGTAGGACG                 CCGC CAA GCAG                 ATTTATTAATTCTAC  43 17
GII90_RS00955  165401 ..  165449 +  -5.1  -3.09516   ATCGGTCGTAGGTTC GAATCCTACCTGCGGAGCCATTG CTT CCATAGCTCAGCAGGTAGAGCAC TTCCATGGTAAGGAA  52 6
GII90_RS00960  165514 ..  165534 +    -4  -5.80364   ATGTATTATTACCAA            GGTTTCTC ATAAG GAGAAAGC            TTTTTTTATTGCGAT  90 42
GII90_RS00965  165629 ..  165643 +    -5  -3.43564   GTCTTCCGCTCCATT               TATCCT AAC GGGATA               TTGTAAATTGAATTG  55 28
GII90_RS00970 NONE
GII90_RS00975 NONE
GII90_RS00980  166076 ..  166092 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 179
GII90_RS00985  167709 ..  167734 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII90_RS00990  170772 ..  170789 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  170912 ..  170927 +    -4  -5.01732   GACGCCGCCAAGCAA              TTGCAC ATTA GTGTAA               TTTTTTAAAAAAGTT  72 28
GII90_RS01000  172711 ..  172736 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII90_RS01005  175774 ..  175791 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  175921 ..  175939 + -14.6   -5.8901   CCAAGCAAGCTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTTATAT 100 35
        sulP  178128 ..  178150 +  -9.2  -5.37043   GCATAAAATAGAGAA           GCCCAGAT GAATGAG ATCTGGGC           TTTTTTATATAACAT 100 35
GII90_RS01025  179190 ..  179209 +  -9.3   -5.1287   GAAGGCATAAAAAAA            CCGCTCA TAGGGT TGAGCGG             TTTTTTCCGTATAGC 100 31
GII90_RS01095 NONE
GII90_RS01100 NONE
GII90_RS01105  194038 ..  194048 +  -2.6  -4.52589   CTCTTGCCGGCACTG                 TTTT TTC AAAA                 TTTTATGTGGAGGGG  60 27
GII90_RS01110 NONE
GII90_RS01115  194223 ..  194245 + -10.7  -5.79595   GCTAGCCCAGTCACA           GACACCTTT GATCA AAAGGTGTC           TTTTTTCTTTTCGGA 100 28
        sigW NONE
        rsiW  195646 ..  195672 +  -8.8  -5.41143   AATCCGAACGGAGAA         GAGTAAAGCG CGTTAGC CGCTTTGCTC         TTTTTTTGCGGGCTG 100 20
        cdaA NONE
        cdaR NONE
GII90_RS01140  199559 ..  199571 +  -3.4  -4.26938   CACATGTTGTAAAAT                CAAG CTTGT CTTG                TTCTTATTTTCTCAA  59 142
        glmS  201688 ..  201719 +   -11  -4.96848   GAGTAATAAATGTTT      AACCCCTTTGGATA AGAT TATCTAAAGGGGTG       TTTTTATGTCCAAAA 100 35
GII90_RS01150  202345 ..  202361 +  -2.2  -3.82923   ACATAATTGGCTGTC              CAAGGA CCGAT TCCTCG              TATTTTAATTAAGTT  51 505
        adaA NONE
GII90_RS01165  204834 ..  204891 +  -8.1  -3.86307   TTAGTTGAAGTGAAG CCGACAATTTTCAGGATTCAATGATCTA ACA TA-ATCATTGAAATTTTGAAGTTGTCGG CTTTTTTGTTGGAAA  77 370
GII90_RS01170 NONE
GII90_RS01175  209176 ..  209187 +    -3  -3.18264   AATCTAAGCATTTAT                CAAA TGGA TTTG                 TTACTCAATACAAAA  45 46
GII90_RS01180 NONE
GII90_RS01185 NONE
GII90_RS01190  210725 ..  210749 +  -7.2  -5.51402   TGTCGAAAGATCTAA          CATCCGCT GTTGTTATG AGCGGATG          TTTTTTTACATCTAT 100 205
GII90_RS01195  211334 ..  211353 +    -8  -4.58395   ACAGAGATATAAAAA            TAAACATC AAAA GATGTTTA             TTTTTACACCATACA  84 29
GII90_RS01200  212646 ..  212670 + -10.7  -5.78622   TTTCGAAAGTTCTAA          CATCCGCTCGT TAT ACAAGCGGGTG          TTTTTTTTAGCGTAG 100 41
GII90_RS01205  213078 ..  213104 +  -7.2  -4.81551   GAGTAAGATGTTTAA         CCCCTCTGGATA TTT TAGCCGAAGGGG         TTTTTAGTATAGATA  83 35
        skfA  213718 ..  213750 +    -5  -4.66537   TTTAACATTTGAGAA     TAGGGAGT-TGAGCG TATT TGCTTATACTCCTTA      TTTTCTCTTAAGGGG  71 36
        skfB  214996 ..  215007 +    -3  -2.73334   AAGTCAAGGCAGGGA                TTCA GGAA TGAA                 TAGTCTATCATTGGT  41 15
        skfC  216483 ..  216506 +  -3.2  -2.85574   ATCAGCCAAAGCATA          CTTCACTCTAA TGA TTAG-GAGAAG          ATTTGATGCAATTGA  44 15
        skfE NONE
        skfF NONE
        skfG NONE
        skfH  219684 ..  219703 +  -7.9  -5.15634   TTATGATGAAACGGT            CCTTCCT ATAAGC AGGAAGG             TTTTTTAATGAAATA  93 78
GII90_RS01245 NONE
        ybdJ NONE
        ybdK NONE
GII90_RS01260  223096 ..  223115 +  -7.2  -3.24902   CAAGGCCGAAATCGA            TGA-GGCAG AGC CTGCCATCA            TTGATGATGATATTA  62 288
GII90_RS01275  225849 ..  225873 +  -9.4    -5.252   GTGTGAATTATTAGG          TAAGCTGTTC ATGTA GGACAGCTTA          TTTTTTATGAGAATC 100 27
GII90_RS01280  227564 ..  227583 +  -7.2  -6.20267   AATAACGATAAAAAA            GAGACATT CACG GATGTCTC             TTTTTTTATTTTTCG 100 36
        csgA NONE
GII90_RS01290  228121 ..  228141 + -16.9  -4.89521   TGAGCATGAGATTTA            GAGCCCTGC CGT GCAGGGCTC            TTTTATTTAGGATGT 100 25
        cypC  230386 ..  230410 + -10.1   -4.9445   AAGTTAAATTAAAAA          GCTCTCTTC CTTTATC GAAGAGAGC          TTTTTGATTACTTCT 100 34
GII90_RS01310  232581 ..  232602 + -10.9  -5.48054   AAATATAGAAGAAAA           CCTTGCGAT AGTT GTCGCAAGG            TTTTTTGCTTTTAAT 100 40
GII90_RS01325  235495 ..  235542 + -18.9  -3.03124   TCACTTTCTAACATA TCGTTGACTAAAGCAACTATA TGTGAT TATAATTGCTTTAGTCAACGA TATTAGAAAGTGGGA 100 48
GII90_RS01330  236472 ..  236490 +    -3  -2.61912   ACGGTGGGATTTGGA             GCTGTCAT GAA AAGACTGC             ATTATGCGTGGATCA  41 16
GII90_RS01335  237745 ..  237776 +  -7.4   -5.9667   GAGGACAAAGGGAAA      GCATCTCTGATT TCGAGATT ATTCAGAGATGC       TTTTTTTGTATTTTT 100 42
        purT  244654 ..  244679 + -14.1  -6.02919   AAAATAGAGTTTGAA         CAGGTCTTGTC ATGG GACAAGGCCTG          TTTTTTTCTTTCTCC 100 34
GII90_RS01365 NONE
GII90_RS01370  246090 ..  246119 +  -7.9  -5.80003   TAGTCTTCAAAGAAT       AGCAGTTTCCTTG ATTT TAAGGGAACTGCC        TTTTTTATTTATTGC 100 24
        cesB  247215 ..  247240 +    -4  -3.21438   ATAATAATAGAATTT         GAATGCTGCT TTTTTT GGGAGCATTC          TATGTTATCATGCTT  48 93
        pssA NONE
GII90_RS01385 NONE
GII90_RS01390  249143 ..  249169 +  -4.4  -5.40072   TACGAAGAATAAAAA        GAGGAGCTTGC ATAAAC GCA-GCGCCTC         TTTTTTTGAAGAAAG  81 29
GII90_RS01395  249474 ..  249493 +  -7.2  -6.09888   GAGAATCCAGCTAAA            GCTTCTTT CAAC AGAGAAGC             TTTTTTTTGTTGGCA 100 27
GII90_RS01400  250925 ..  250945 + -11.2  -4.70659   ATCAAGTGAGCGGTG            TCCCCTGT GGTAA ACAGGGGA            TTTTTACATATCGCA  95 32
GII90_RS01405  251911 ..  251927 +  -2.3  -3.42775   GAGGAACTACAAAAA              TAGTTTT CAG ACAACTA              CTTTTATTAGTGAGT  45 23
GII90_RS01410  253087 ..  253109 + -12.8  -5.76633   TGCTGAATAAAAAAA           GAACACCTCG TAT TGAGGTGTTC           TTTTTTTCTATATGC 100 31
        gamR  258075 ..  258131 +  -5.3  -4.27026   GAACGAAATTCACCG TAGAACAGTCATATCATTCATAAAGCA ATG TGTTTTAAGAAGGGAATGGTGGTTCTA TGTTTTTATTTACGA  67 3
GII90_RS01435  258413 ..  258433 +  -8.3  -5.04868   GCGCTCTAAATCAAA            CAGCCAG AATAAAA CTGGCTG            TTTTCTTTAATTTCA  95 32
GII90_RS01440  259697 ..  259718 + -14.5  -5.48213   GTGAAAATCGAAAAA           GAACCTGCC CGGA GGCAGGTTC            TTTTTATTTTGAATG 100 37
GII90_RS01455  262297 ..  262325 +  -7.4  -4.83722   AACGCAAAAAGAGAA        AGGTGTTCAGCC CATAT GTCTGAACACCC        TTTTCTTATGATATT  83 3
        glnK NONE
        glnL  267269 ..  267287 +  -6.7  -5.52384   AGGATATAAACCAAA            CAGCC-GG CTGA CCAGGCTG             TTTTTTTGCTGCGCA  93 32
        kdgD NONE
GII90_RS01485  269917 ..  269944 + -10.6  -2.91276   GAAGCCGTAATGGTG        CTGGAAAGAGGC GTGC GTCTCTTTCCCG         GTTTATCACAACCAG  77 31
        gudP NONE
        gudD  272755 ..  272767 +  -2.7   -4.0127   CGGAAGCGCCCGTGT                CTTGT GCG ATAAG                TTTGATTGTAAATAT  55 14
GII90_RS01500  273548 ..  273573 +    -4  -5.40474   AATAATGGTGAGCAA         CCGCAGTT GAAACGTAAG AGCTGCGG          TTTTTTTAAACCAAT  78 36
        garD  275355 ..  275371 +  -3.6  -5.31456   GGTTATCAAAAAAGA              GGGTGG CGTGC CTGCCC              TTTTTTGTGCCTTCA  78 220
GII90_RS01510  276648 ..  276673 + -12.6  -5.61913   GGTGGTACCGCGAGA         CCCTCGTCCT TTGCAT AGGACGGGGG          TTTTTTGTGTTTCTT 100 316
        rtpA NONE
GII90_RS01520  277891 ..  277932 +  -5.3  -5.50313   ATAATTTTTATAAAA CACACACGTT-TTTCAATTA CAA TAAGTGTAATTACGTGTGTG TTTTTTGATTTTGTA  88 37
        ycbL NONE
        ycbM  279594 ..  279612 +  -2.4  -3.55444   CGCATGACATATTAA             TCGTAAGA ATT TCTTAAGG             TTTGAGAAATAAAAA  47 26
GII90_RS01535 NONE
GII90_RS01540  281339 ..  281361 + -13.4  -3.81339   CCAATATGTATAAAA           GGCCGATGCT GTC AGCACCGGCC           TTTCCATTATGAGTC 100 51
GII90_RS01555  282505 ..  282525 + -14.1  -5.27335   ATTTTAGAGACAGGA            CACCGTTCA AAT TGAACGGTG            TTTTTCTTTGAAAAG 100 34
GII90_RS01560  283345 ..  283374 +  -9.4  -5.86609   ATAACTGATAAAGAG       CACTGAGTCATT CTGCGA AATGGCTCGGTG        TTTTTGTTTTTTTAA 100 37
GII90_RS01565 NONE
        phoD NONE
       tatAD  285595 ..  285617 + -13.5  -5.60993   GGGCTGAATGCTGAT           GAGGCAGAC ACCGG GTCTGCCTC           TTTTTTTATGAAAGG 100 34
        tatC  286428 ..  286481 + -11.8  -4.51847   ATTGTGCGGCCGTAA CAGCGGCGATTCTCAATGCCCGGACA ATCG TGTCCAGGC-T-GAGGCTCGGCGCTG TTTTGTCGATTGTTT 100 78
GII90_RS01590  288221 ..  288243 + -10.6  -4.44797   AGTAAACATGAAAAA           GCCCCTGA ACACTAG TCAGGGGC           TTTTCATATTAATGA  95 36
GII90_RS01605  291648 ..  291665 +    -7  -5.91981   GAGTATTGAAGAAAA             GAAGGC GAATAA GCCTTC              TTTTTTTTGGCTTTT 100 32
        lipA  292455 ..  292479 + -14.5  -3.93216   TAATGAAAAACAAAA          CCTTGAAGAAT GCT ATTCTTCAAGG          TTATTCTGCTTTCAG 100 38
GII90_RS01620  294184 ..  294208 + -15.9  -6.02919   TCATAATGGAAAAAA          CCTTGAAAAGC CAG GCTTTTCAAGG          TTTTTTTATTTCTGA 100 35
        natA NONE
        natB  297940 ..  297958 +  -7.5  -5.05601   AATAAACTTGCGAAA             GGAGAAA TACAC TTTCTCC             TTTTTGTATATCCTG  89 36
GII90_RS01645  298997 ..  299031 + -13.8  -3.05275   CGACATTTTCAAATA     AAAAAGGAAATAGCCG TCA TGGCTATTTCCTTTTG     GTGTTTTATTCTTTG 100 25
GII90_RS01660  301945 ..  301975 + -14.2  -5.00895   ACAATAATAGAAAAG       GACCTTTCTTCACT TTA AATGAAGAAAGGTC       TTTTTATATAATAAA 100 123
GII90_RS01665  303550 ..  303561 +  -4.4  -3.83561   TTCCATATCCCATAT                GATG CTGC CATC                 CTTTTTTTGAAGGGC  58 180
        rapJ  305157 ..  305179 + -12.8  -5.70829   TTTCAATAGGAAATG           GCAGAGAACT ACA GGTTCTCTGC           TTTTTTTGTGCTGTT 100 32
GII90_RS01680 NONE
GII90_RS01685  307756 ..  307774 +  -8.8  -5.53991   TAATGATTGAAGTAG             CCCGGC ATTTTTA GCCGGG             TTTTTTTAGTACATA 100 38
GII90_RS01690  308893 ..  308919 + -13.1  -4.55295   GGTTAAATCATAAGA         TAGTGTGCGCC GGAGG GGTGCACACTA         TTTCTTTGTGAGAAA 100 28
        znuC NONE
        znuB  310450 ..  310473 +   -14  -5.60993   CCGATAACATGAAAA          GCAGTTTTCC CTAG GGAAAACTGC           TTTTTTTATAGAAAC 100 34
GII90_RS01710 NONE
GII90_RS01715 NONE
GII90_RS01720 NONE
GII90_RS01725  314408 ..  314430 +  -4.8   -5.4505   AATAAAACAAAACAA           GGAGGGAGGT TCA ATGTCCTTCC           TTTTTTGTTACCGAA  88 36
GII90_RS01730 NONE
GII90_RS01735  317207 ..  317235 + -13.9  -3.77219   TGCAGCAATAATAAA        AACCCCGCTTGTG GAA CATAAGCGGGGTA        TTTCAATTACATCAT 100 30
        niaP  318755 ..  318774 +  -9.3  -5.09426   TGTCAACAATCTGAG            GCACCTC TTGAAT GAGGTGC             TTTTTTACAATTGCG 100 254
GII90_RS01755 NONE
GII90_RS01760  322713 ..  322744 +  -3.1  -2.73441   AAAAGCAGGGGGAAT      GCCTGATGCTTA AAAAAATCA TAGGCATC-GGC      GTTTCCGCCATGCTG  43 20
       opuAC  323608 ..  323626 + -14.6  -5.53288   GAAGTAATCAAAAAA             GCAGCCTG TGT CAGGCTGC             TTTTTTTGCGTTAAG 100 34
GII90_RS01775  326380 ..  326402 + -13.4  -4.36729   GTTTTAACGATTGCT           GCCCGCCG GCTTGTA CGGCGGGC           TTTTGAGTTATTCAT 100 34
GII90_RS01780  327047 ..  327076 +  -6.5  -3.52111   AACATTGATTTGTAT       TCACTCTGCCAAG TTGT TTTGATAGAGTGA        TTGTGATAATTTTAA  64 4
        amyE  329225 ..  329245 + -12.7   -5.5112   CGGGACTTACCGAAA            GAAACCATC AAT GATGGTTTC            TTTTTTGTTCATAAA 100 54
GII90_RS01790 NONE
GII90_RS01795  332005 ..  332029 + -17.3  -5.82172   GTGTAATAGAAAAAA          GCAGTACATGC CCA GCATGTACTGC          TTTTTTTATGTTAAT 100 35
GII90_RS01805 NONE
GII90_RS01810 NONE
GII90_RS01815  335701 ..  335724 +  -5.2  -5.53991   ATAAATCAAGGACTG          GCAGGGCGAT CTTT ATGACCCTGC           TTTTTTTGATAGATC  88 37
GII90_RS01825  337743 ..  337754 +  -2.2  -2.78504   GTGACATCCATACGG                GTTG AAGT CAGC                 TGATCTCTCTTGTTC  41 11
        nadE  338716 ..  338734 +   -16  -4.50976   AATAAGTTGAAGAAA             GCCCGCTC TCG GAGCGGGC             TTTTGTCGTGTACAG 100 36
GII90_RS01840  340177 ..  340217 + -22.1  -4.49939   GGGATCTTTATCAGC  CGATGTAAAAAGCCGTGCG CAG CGCACGGCTTTTTTTATCG  TTTTATCCCTTGTAT 100 18
GII90_RS01850 NONE
GII90_RS01855  343107 ..  343127 +  -5.3  -5.60993   GATAAATGTGAAAAG            CCGCCGCAT ATC ATCAGGCGG            TTTTTTTCTGCAAAC  88 39
GII90_RS01860  343951 ..  343976 +  -2.6  -4.67256   GTGTGGAAGGATGGA         GGAAGCTGATG TTTTT TGTC-GCTTCC         TTTTCTCCTTTATTC  62 17
GII90_RS01865 NONE
        pruA  346637 ..  346663 +  -8.7   -3.7829   CTAAGCGGGACTAAA         TGGGCATCCTC CCTGC GGGGGTGTCCA         TTTCATCCATATACT  78 37
        putP  348176 ..  348214 + -16.2  -3.08032   GTCGCAATAAAGATC   GAAAGGAGGAGGAAGGGG CTG TCCCTTTTTCCTCTTTTC   TCCTTTTAAGCGGCC 100 31
        putR  349567 ..  349582 +  -7.6  -3.94853   GAAATAAAAAAGAAA              CCAGTA CTTG TACTGG               TTTCGTCTTCACTTA  74 34
        ffoR  353810 ..  353823 +  -6.7  -4.14739   AAAACGAACAGGATT               CATGC TTTT GCATG                TTTTCCACTGCATGG  70 368
GII90_RS01930  363752 ..  363771 +   -10   -5.8901   TTTAGGATTTTGACG            GACACGCG TTTG TGCGTGTC             TTTTTTATTTTCTCT 100 36
GII90_RS01935 NONE
GII90_RS01940  365400 ..  365412 +  -6.3   -4.4767   CCATACAATTTAAAT                CGTAA CAA TTACG                TTTTATGATAAATGG  73 72
GII90_RS01945 NONE
        zinU  366863 ..  366882 +   -10  -5.52384   ATCAATAGAAAAAAA            GCCG-TCCC ATG GGGAACGGC            TTTTTTTAATGAAAC 100 33
GII90_RS01965 NONE
GII90_RS01970  369275 ..  369306 + -11.8  -4.87665   TGCTGACGAAGAGAT      TAGAAAGAGCGAAT AATG GTTCGCTCTTTTTA       TTTTTATGCATAAAA 100 10
GII90_RS01975  369713 ..  369734 +  -9.5  -4.39407   ACATTAAGATTTTAA           GCATCCAAT GGGA ATTGGGTGC            TTTTGCGTTATTTAC  91 34
        bglC  371296 ..  371320 + -12.2   -4.8622   AAAGTTTATAAAGAG          TCCCTGAGAG TTATT CTCTCAGGGG          TTTTTCATTACACAG 100 30
        hxlR  375993 ..  376013 +  -8.3  -5.63857   AAAGAATCGTTGTAA            GACGCTCTT CGC AAGGGTGTC            TTTTTTTGCCTTTTT 100 26
       srfAA NONE
       srfAB NONE
       srfAC NONE
       srfAD  402721 ..  402743 +  -9.9  -5.80817   CAACCGTGATCAAAA          GCGG-ACAGC TTCG GCTGTTCCGC           TTTTTTTGTGTTGAA 100 32
GII90_RS02035  404044 ..  404068 + -11.5  -4.81851   CCATTCAATATAAAA          GGATCAGCACT GTC AATGCTGATCC          TTTTTAAATTTGAGT 100 28
GII90_RS02050  407496 ..  407514 +  -4.4  -3.15996   AGCGTCGGGAAGATC             AGGGATGC ACG GCTTCCCG             TATTCCTGCGTGCTA  50 458
GII90_RS02085  412747 ..  412766 +  -3.6  -2.73635   AACAAAAAGGAGGAG            CTTGATCA TGGC TTATCAAG             ATTTCAGAGAATTTC  45 21
GII90_RS02090 NONE
        bsdD NONE
GII90_RS02100  414889 ..  414909 + -16.9  -5.74122   ACGGTAATATCGATA            GCCTGACGC CAT GCGTCAGGC            TTTTTTTATATAATG 100 34
GII90_RS02105  415797 ..  415824 + -15.6   -4.1021   TTGATCAATAAAAAA        CAGCCCGCAGAT CAAC ATCCGCGGGCTG         TTTCTGATTATAAGA 100 30
GII90_RS02115  419350 ..  419369 +  -2.7  -5.89947   GATTGTCTGAAAAAA            GCGCCCC CCTTTA GGGGTTC             TTTTTTTTCGATTTA  85 31
       gerKA NONE
       gerKC NONE
       gerKB  423707 ..  423731 +  -8.5   -5.1167   AAAAAATGATAAAAA          GAGCGGGGG GATGCGG CCGCCGCTC          TTTTTATGTTCACTT 100 32
        yclJ NONE
        yclK  428273 ..  428299 +  -8.7  -5.00616   AGCAATAGCATACAG        GGCGG-CGCATC AACT GATGCATCCGCC         TTTTTTGCACACCGC 100 33
        rapC NONE
        phrC  429690 ..  429713 + -12.5  -5.45802   TGACGTAAGAACAAG          CCCCTTCTC ATTAGC GAGAAGGGG           TTTTTCTTTTCAAAA 100 33
        yclN NONE
        yclO NONE
        yclP NONE
        yclQ  435596 ..  435620 + -12.2  -5.84381   AAGTAAAACCAAAAA         GAGCCTCCGCT AAAT AGCGG-GGCTC          TTTTTTTGTTAATCA 100 35
GII90_RS02225  439626 ..  439641 +  -6.1  -5.72616   CCGCTGGTGAATCAA              TCCCC TGTAAC GGGGA               TTTTTTTATGTCCGT  91 31
        gabT  442454 ..  442473 +  -4.2  -2.56164   TGAAGGGCTCAGCAT            CTTGGAGG CGGG CCTGCGAG             CTTAATCATTGGAAA  47 1
GII90_RS02240  443954 ..  443978 + -20.1   -5.0916   AATGCACGCTCCTGA          GAGCTGCCGGA TTT TCCGGCAGCTC          TTTTTGTGTTCCGGC 100 44
        glcU NONE
GII90_RS02250  445736 ..  445762 +    -8  -4.67607   GGTTAAACATAAAAA         GCGACCCAGA CATGACA TCTGGATCGC         TTTCTTTATTAGGCA  84 35
GII90_RS02270  449140 ..  449159 + -13.6  -5.61881   AGAGGAAAGAGAAAA            GGCTCCTG AAAC CAGGAGCC             TTTTTATTTTTAAAA 100 17
GII90_RS02275 NONE
GII90_RS02280 NONE
GII90_RS02285  452343 ..  452365 +   -12  -5.60864   AATCAATAACCGACC           ACCCGTGACA CAA TGTCACGGGC           TTTTTTTACTATCTC 100 32
GII90_RS02290  453492 ..  453531 + -13.7  -3.90291   TTAAGAAAGCTCTGA TGAATCAGGCCGGTGGCAG ATGG CTGCC-CCGGCCTG-TCCA  TTTCCTTACGAAAAT 100 26
        lepB  454269 ..  454294 +  -8.2  -5.31275   AAAATGATGATGAAA         CGGTGCGGAG CCGGCT TTCCGCCCCG          TTTTTTATGATAGAA 100 105
GII90_RS02305  455342 ..  455365 + -11.8  -4.05861   GAAAAATGAAAAAAA          CCCTTCACAA CATT TTGTGAGGGG           TTCTATTTTGTGTCG  91 32
GII90_RS02315  456420 ..  456441 + -10.2  -5.37593   GGTACTATAAAAAAA           GAGAGTCC TAAGAT GGACTCTC            TTTTTTAGTTTGGCA 100 31
        pxpA NONE
GII90_RS02325 NONE
GII90_RS02330 NONE
        pxpB NONE
GII90_RS02340 NONE
GII90_RS02345 NONE
        lipC  462665 ..  462702 +   -18  -2.79679   AAGAATTATCAGTTT   CATAGAAAACGCGCCT CATGAC AGGCGCGTTTTTTATG    TGTGATCGAAATATT 100 21
GII90_RS02355 NONE
GII90_RS02365 NONE
GII90_RS02370  466544 ..  466565 +  -9.5  -4.76312   GATATTCCATAAAAA           GCATCAGTT TACC AGCTGATGC            TTTTTCAATATTGTC 100 29
        mtlR  468821 ..  468844 + -11.8  -4.99035   TGTAAACCTGCATGG          CACACGTCAA AAAT TTGGCGTGTG           TTTTTCTGTGGATGG 100 36
GII90_RS02380  470539 ..  470568 + -14.4  -3.66178   ACATTCATAAAAGAA       GAAGCCCGTCCAC TTTAT GTGG-CGGGCTTC       TTTGCAGTTGCACAG 100 31
GII90_RS02390 NONE
        lyxE  472685 ..  472706 + -14.5   -5.0916   GATCCAAGAATATAA           GGATGGGCT TAAC AGCCCATCC            TTTTTGTATTGAAAA 100 26
GII90_RS02400 NONE
GII90_RS02405  474217 ..  474238 + -12.9   -5.7946   AAAGAATAAGACAAA           CCGCCCGGC GTAC GCCGGACGG            TTTTTTTATTGCAAA 100 421
         amj  475144 ..  475166 + -13.5  -4.68506   GGTTTTAATAAGAAA           GGCTGGATC ATAAA GATCCAGCC           TTTTTGCGCTTCCTT 100 33
        lrpC NONE
        topB  478346 ..  478364 + -10.3   -5.4756   TAAATAATAAAAAAA             CCTGTGC CTATC GCACAGG             TTTTTTATTGGACTT 100 34
GII90_RS02430 NONE
        epsK NONE
GII90_RS02440 NONE
GII90_RS02445 NONE
GII90_RS02450  485555 ..  485575 +  -9.7  -6.20267   AGATACAGAATAAAA            CAGAGGCGA TTT TAGCCTCTG            TTTTTTTATTTTTGG 100 28
        kimA  487859 ..  487882 + -12.5  -4.56597   AAAAGTAAAGCTCTA          GGACCAAGG GAATCA CCTTGGTCC           TTTTTAGCGGGAAAA 100 33
        mutT  488372 ..  488383 +  -2.2   -4.0348   TGATTCAGGTCTCCG                GGTT TTAA AGCC                 TTTCTCCTGTGGTAT  53 38
GII90_RS02465  490156 ..  490176 +  -8.9  -7.14698   GTTATTTTAAAAAAA            CAGGGGCCC TAA GAGCCCTTG            TTTTTTTTTTTTTTT 100 31
GII90_RS02495  493981 ..  494006 +  -6.1  -5.52384   ATGGAATAGCAGAAA         GCAGACGGA CACCGCGA TCCGCCTGC          TTTTTTTAGTGGAAA  91 32
GII90_RS02500  494512 ..  494537 + -12.6  -5.79526   CCTGTAAATAAAAAA         GCGATCCGGC ACATCA GCTGGATCGC          TTTTTTTTGGAATCT 100 63
GII90_RS02505 NONE
GII90_RS02510  495306 ..  495328 +   -15  -3.78419   GAAGGCATAATCAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTCTCTTTACTCG 100 31
        dctS NONE
        dctR NONE
        dctA  501037 ..  501054 + -12.7  -5.73672   AGTCTGAAAAAAGAA             CGGCCCA TCCA TGGGCCG              TTTTTTTAATTGTTT 100 34
GII90_RS02540  502447 ..  502476 + -10.1  -5.24129   ACAAATGCTATAATA       CAAACAGTGCCTA ATGT TGGGCACTGTTTA        TTTTTTGTCGAAAAA 100 244
GII90_RS02545 NONE
GII90_RS02550  504235 ..  504246 +    -3  -4.63479   GCTCACGTAAATCAA                TATC ATTT GATA                 TTTTGGTTTATACTA  62 69
GII90_RS02555  504623 ..  504649 + -16.6  -5.00895   CAAATCCTGTGTAAT         CGCGCTGTTCCC TTG GGGAACGGCGTG         TTTTTCTATACTGGG 100 27
GII90_RS02560  505901 ..  505915 +  -7.1   -5.1383   GAGTCATAAAAAAAA               GAGCC TTACC GGCTC               TTTTTATGTATTGTT  90 32
GII90_RS02575  507454 ..  507465 +  -5.8  -3.50466   TGAAAATAAGCAGGC                TGGG AATG CCCA                 TTACTTGGTATTTTT  57 144
GII90_RS02585  508920 ..  508941 +  -7.3  -5.08169   TCTAATGAAGAAGGA           CACTGCC GGTAAAAG GGCAGTG            TTTTTTCCCGTATAT  90 36
        murF  510557 ..  510596 +  -8.6  -2.63073   TCTTGGGAGCGGATG  GAGCAGCAG-CCGGCATAT TCG AGATGCCGATCTGCTTCTC  ATCTTATTGAAAAAC  68 228
        cshA  512254 ..  512276 +   -15  -5.49569   TTTGATCGATTCAGA           GCCCAAAACA TGA TGTTTTGGGC           TTTTTTATGTTCGTG 100 41
GII90_RS02600 NONE
GII90_RS02605  514604 ..  514627 + -12.4  -5.75342   TTTGTCAACAATCTG          AAGCGGCGGT TAAT ACCGCCGCTC           TTTTTTTTGCACGCA 100 268
GII90_RS02615 NONE
GII90_RS02620  516863 ..  516881 +  -8.9  -5.63103   GAAATAACCGCCAAA             GGCCAAA CATGA TTTGGCC             TTTTTTTCGTTAGAC 100 34
         alr NONE
        endB NONE
        ndoA  518903 ..  518921 +  -8.9  -6.09196   TAGACATATTTGCAG             GTTGCTC AAATA GAGCAAC             TTTTTTTGTTTTCAA 100 38
       rsbRA NONE
        rsbS NONE
        rsbT  520584 ..  520596 +  -7.7  -3.05816   GGAACAGAGATACAA                GCCAT CAA ATGGC                TTCGGTAGGAGGTAA  65 5
        rsbU NONE
GII90_RS02660 NONE
        rsbW NONE
        sigB NONE
        rsbX  523860 ..  523879 +   -10  -5.81032   AAAAAACCAGAAAAA            GAAGCTGG ACAT CCGGCTTC             TTTTTTTTGCGGTTG 100 39
GII90_RS02680 NONE
GII90_RS02685 NONE
GII90_RS02690 NONE
GII90_RS02695  525254 ..  525269 +  -6.8  -5.82281   ATGAGTAAAGATACG              GGCAGC GCCA GCTGTC               TTTTTTTATGTGTTT  93 33
GII90_RS02700  527503 ..  527520 +  -9.9  -5.21709   ATGGTAAAATAAAAG             CACTGCT TACG AGCAGTG              TTTTTTCCTATAGAA 100 29
GII90_RS02710  528269 ..  528291 +  -5.6  -3.01745   CTTGACACTGCAAAT           CAAGGCTGAT ATA ATAAGTCTTG           TCTCATTATTCCACA  53 116
GII90_RS02715 NONE
GII90_RS02720 NONE
GII90_RS02725 NONE
GII90_RS02730 NONE
GII90_RS02735 NONE
GII90_RS02740 NONE
GII90_RS02745  529023 ..  529054 + -11.1  -5.71712   TCGGCCGCATCTCAA      TAATACCAAGGGT TTAACC ACCTTTGGTATTA       TTTTTTTGTGTGGAA 100 32
        lrpA  531073 ..  531110 +  -2.7  -4.93318   TATATGCTCTAAAAA   AGCCCTAGGTTGG-ATAT GGA ATTTACCAAGCTGGGGCC   TTTTTATACATTATA  68 83
GII90_RS02765  532311 ..  532340 + -11.6  -4.39107   CAACAACTTAAAAAA       GGATGTTCAGAA AAATAC TTCTGGACATCC        TTTATTCATTATCTT  95 92
GII90_RS02770  533587 ..  533621 +  -8.8  -3.44527   GACAAATAAATAGAA     GAAGCTCATAATTA TAAAAAC TAATCATGAGCTTC     TTCTAATAATGAATA  73 51
GII90_RS02775  535218 ..  535235 +  -2.7  -4.95547   ATGTAATGAACGGAA             GAGATAA TTAT TTATCAC              TTTTATTATTGTACG  68 178
GII90_RS02780 NONE
GII90_RS02785  536544 ..  536572 + -14.1  -5.55769   TAGCTAATTTTAAAA        TCACTTTGTCTTT ATA AAGGACAAAGTGA        TTTTTTGTTATACAG 100 34
GII90_RS02790  537165 ..  537192 +   -10  -4.51994   CATAAAGTTGGGAAA        GAAGGATGTTAC TTAT GTAGTATCCTTC         TTTATTATTCCTTGA  91 45
GII90_RS02795 NONE
        cspC  538572 ..  538593 +    -8  -5.77988   AATCGTTTATACAAA           CAGGCTCT TTATAT AGGGCCTG            TTTTTTTATGTCTAT 100 46
GII90_RS02820  542627 ..  542652 +  -5.4   -5.4505   CGGCAGTATCAAAAA         TACCAAGGGT TTTGAC GCCCTAGGTA          TTTTTTCTTCAAGAA  88 104
GII90_RS02830  545197 ..  545222 + -10.6  -5.30686   TACCTAATATTGTTT         GCCATACAAT TATGAC ATTGTATGGC          TTTTTTGTGCGTGTT 100 34
GII90_RS02835  546604 ..  546617 +  -2.5  -4.51763   AAAGGGTAGGATTGT               TTAAT TTAC ATTAA                TTTGTTATATTGTTA  60 39
GII90_RS02840  547248 ..  547265 +  -7.7  -5.95946   AATTATACAAAAAGA             GAAGGCT TGTG GGCCTTC              TTTTTTTGTTGTTGC 100 78
GII90_RS02845  548093 ..  548112 +  -6.5   -5.4505   TCTATAGAAGAAAAA            CAAGCAT AGTAAG ATGCTTG             TTTTTTCTTAGGACA  93 93
GII90_RS02860  551973 ..  551992 +  -5.1  -3.99436   CCAGGCCACGATACG            TCTGTTT AGCGAA AAACAGA             ATTTTTTATTTGCTC  61 131
GII90_RS02865  552495 ..  552511 + -10.8  -2.52543   ACGATAACTCAGAAA              GCCCGC TTTTC GCGGGC              TCGATTGAAGCAGAT  77 34
GII90_RS02880  554760 ..  554785 +  -9.1   -5.4111   TCTGAATCACAGAAA         TACCAAGGG CGTCAAAA CCCTTGGTA          TTTTTTCTGGTTATT 100 136
GII90_RS02890  556026 ..  556039 +  -3.9  -2.94747   CTGCTTATTTTTGGT               GAAAT ACTT ATTTC                TCTGTGATGAAATAA  47 162
GII90_RS02900  558114 ..  558126 +  -4.1  -3.34962   GAGCGGAATCATCGA                GGGAA AAG TTCTC                TTATCGGATGTCGAA  50 119
GII90_RS02905  558321 ..  558340 +  -7.8  -5.21709   TACTTGCAATGTAAA            CAGGCCTC TAAA GAGACCTG             TTTTTTAATATCCAG  93 27
        aseR NONE
        arsB  560642 ..  560672 + -13.4  -5.77734   CAATGTGTTGTTCAA       CAGGTGTCTGCG AGCTGAG TGCAGACACCTG       TTTTTGTTTTTATTT 100 384
GII90_RS02925  561592 ..  561613 + -11.7  -5.79595   AGAACCTTAAAAGGA           GATACCAAC CGAT GTTGGTATC            TTTTTTGTTTTAGAG 100 51
GII90_RS02935  564422 ..  564453 +   -11  -3.65199   TGACGATTCATATTC      TGGAAGCCGAATGTG TTT CAC-TTCGGCTTCGA      TTTGGATAGGGCATT  83 323
GII90_RS02945  565678 ..  565711 + -13.4  -4.20868   GAGGCACGATATCTA     GGAGGAGTAAGATT TGTTCT AATCTTACTCCTTC      TTCTTATTTTGAAGC 100 68
        ydfH NONE
        ydfI  568714 ..  568733 +  -6.5  -5.73563   TGAAAATTGCCCAAA            CGTACAT GCCCGA ATGTACG             TTTTTTTCATTTCAT  93 51
GII90_RS02975  571298 ..  571320 +  -9.2   -5.0538   TTTGTCCAAGAAAAA           TAGAGTCCAT AAG AGGGACTCTA           TTTTTTGAAGTGCCC 100 345
GII90_RS03000 NONE
GII90_RS03005 NONE
GII90_RS03010  577646 ..  577674 + -12.6  -5.10163   TACGAAAGTATGTAA        GAACAGTTGCTG CTTGT CAGTAACTGTTC        TTTTATTTTCACATT 100 41
GII90_RS03015  578173 ..  578188 +  -7.6  -5.95946   AATAAGGCAAAAAAA              GAACTC AAAT GAGTTC               TTTTTTTATTCTTCA 100 44
GII90_RS03035  581144 ..  581172 +  -3.9  -4.32857   TAAACAAACGTAGAA       GCTTCGGAATCA AAAAAA TG-TTCCGGGGC        TTTATATTTGAGCAC  64 356
GII90_RS03055 NONE
GII90_RS03060  583147 ..  583164 +  -6.9  -5.60993   ATTTCTGTGTTATTC             GTCCGGC ATCA GCTGGGC              TTTTTTTATAAAGGA 100 145
GII90_RS03065  583778 ..  583795 +  -9.9  -4.18762   ACATATAAAGAAAAA             GGACAAC AGCT GTTGTCC              TTTTCAATGCCGCTT  86 140
GII90_RS03085 NONE
GII90_RS03090  591143 ..  591164 + -11.7   -5.1675   GAGTAATCGAGAGAA           GAGTGATGA ATGG TCATCACTC            TTTTTTCATGACTAA 100 35
GII90_RS03105  593936 ..  593966 +  -9.9  -4.88918   TAGGGCAGAATTCAT       AAAAAAACCTGAC ATGAC GTCAGGTTTTTTG       TTTTATTTAGAATAA 100 24
GII90_RS03115  595648 ..  595674 +  -8.1  -5.80248   ATTTGTATGATCCGG         TACCAAGGG AGAGCAGAA CCCTTGGTA         TTTTTTTATGTATTC 100 40
GII90_RS03120  597028 ..  597047 +    -5  -5.95166   AAAAGTGTAAAAAAA            GACACC AGAGCTTG GGTGTC             TTTTTTTTGATTAAG  91 31
GII90_RS03125  598377 ..  598403 + -19.6  -3.52918   AACAAATAAGAAAAA         GAACTCCCGTAC CTT GTACGGGAGTTC         TTGATTTAAAACTTG 100 32
GII90_RS03140  601479 ..  601497 +  -3.8   -3.2614   CTTCAATCGTAATAT             CATGGCCT TCA AGCTCATG             TTCATCTAACCGCTC  48 198
GII90_RS03155  603441 ..  603456 +  -7.5  -5.88197   CTTAAAGCAGTAATT              GCCGC CTGACA GCGGC               TTTTTTTATGTTTGG 100 28
GII90_RS03160  604205 ..  604224 + -10.8  -5.66989   CTAAATAATAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTTTG 100 33
GII90_RS03170 NONE
GII90_RS03175 NONE
        celB NONE
        gmuD NONE
        gmuR NONE
        gmuE  610887 ..  610905 +  -3.8  -2.53831   GGCAGCATCCGGGGA             GGTGCG ATCATGA CGCATC             CATTATTTTTAGAGC  45 13
        manA NONE
        gmuG  612967 ..  613006 + -10.8  -2.53911   TCCGTAATGTCACAA  TTAAGAAGGTGCTCAAGA AGTT TCTTGAGCACCTTCCCAC   TGGATTAAGCATTCA  77 42
GII90_RS03215 NONE
GII90_RS03220  614360 ..  614371 +    -3  -2.61144   TCTCATCACCCGCTC                CATT ATTG AATG                 ATCTTTGAAAACTAA  41 23
GII90_RS03225  616138 ..  616163 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII90_RS03230  619201 ..  619218 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf NONE
GII90_RS03240 NONE
GII90_RS03245  619628 ..  619647 +  -5.7  -4.62441   TTTACTGTATCTTCT            GCTTGGT GTCATA GCCAAGC             TTTCTTTATATCGGG  73 87
GII90_RS03250 NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD  623370 ..  623394 +  -7.2   -5.1634   TGACTTCTTATCAAA          GTCTCACG AGATAATAG CGTGAGAC          TTTTTATCTGTTTGT  90 12
        moaC NONE
GII90_RS03285 NONE
       tatAY NONE
        tatC  627792 ..  627825 + -12.7  -4.98128   TTCTGGGCAATAATA     AAAAATCCATTTCTC ATGC GAGAAATGGATTTTC      TTTATTTTTGGTTCT 100 28
GII90_RS03310  629255 ..  629272 +  -6.3  -3.67597   CGTGAAAGCGACATT             TTAGCTG TTAT CGGCTAA              TTCTTAAATAAACAA  63 8
        groL  631032 ..  631066 +   -13   -4.4727   AATAAAAAAAGAGAA     GGTCTTTCATCAGTTT ACT AAACTGTTGGGAGACC     TTTTCTCCATATTAG 100 104
GII90_RS03325 NONE
GII90_RS03330  633446 ..  633458 +  -3.3  -4.09243   CATCATGGCGTGTAG                GAGTG ATT CACCC                TTTTAAGAAACTGTC  57 43
GII90_RS03335  634245 ..  634256 +  -4.4  -3.51137   AGGTATAATGATAAA                GAAC ATTC GTTC                 TTGTATGGGGTACTT  55 493
         dcm NONE
         dcm  636817 ..  636840 + -13.9   -5.5762   CATACTAAAAAGTAT          CGGAGCTGG ATAAAA CCAGCTCCG           TTTTTTATCTTTAAT 100 60
        ydiR NONE
       bsuRB NONE
GII90_RS03370  642372 ..  642410 + -12.6  -5.24989   CATTTGCAAATTTTC   AAGGCTTCTCATGAGTTC ACC GAACTTGTGAGAAGCTTC   TTTTTTGATGTATAA 100 285
GII90_RS03375  643141 ..  643157 +  -5.2  -3.43446   AAGTATTCTAGTTCT              GTTCTT GTTGG AAGAAC              TATTCTTAAGTATCC  55 145
GII90_RS03380  643780 ..  643813 +   -14  -3.57406   GACTTTAATAAGAAA     CGAAAGGCCAACTG CGACTT CAGTTGGCCTTTCC      TATTTATAATAAAGA 100 51
        gutB  647620 ..  647641 +  -6.6  -3.59252   ATCGCTGAGTGAACA           GGGAGGAT CTTCGT ATTCTCCC            TCTTGTTTACTGGAA  64 33
GII90_RS03395 NONE
GII90_RS03400  650144 ..  650180 +  -2.4  -5.87996   TTGTAAATCATTGAA   GATGTTTCTTGAAAGTC TTTG GACTTTTGGGGG-CATC    TTTTTTTATTGCTTA  83 35
GII90_RS03405  651021 ..  651047 + -14.4  -3.27674   ATAAGTAATACATAG         GAGGCCGCAGCT TTC GGCTGCGGCGTC         ATTTTATCATAAAAT 100 33
GII90_RS03410 NONE
GII90_RS03415 NONE
GII90_RS03420  653888 ..  653912 +   -10  -5.63517   ATCATACAGTGAAAA          GTCCGGAGTG ATCAG CACTCGGGAC          TTTTTTATTTAGGAG 100 43
        iolT  656958 ..  656981 + -15.4  -4.99134   GGATAATTTAAAAAA          GAATCCGCAC CCGA GTGCGGATTC           TTTTTGGTTTCAAAT 100 35
        walM  658868 ..  658887 +  -6.5   -5.1244   TATATAATCTGGAAA            GCAAGAA GTCACA TTCTTGC             TTTTTCTATTGGTGG  86 47
GII90_RS03445  659964 ..  659987 +  -8.8   -5.1675   GATTAACTAATAAAA          ACCACTCGGC ATGA GCTGAGTGGC           TTTTTTAATGGATGA 100 31
        mneS  667123 ..  667141 + -13.2  -5.53079   TGTCAACAATCTGGA             GCTTCCTG CCA CAGGAAGC             TTTTTTGTGTGTTTT 100 229
GII90_RS03490 NONE
GII90_RS03495  669403 ..  669419 +  -4.3  -3.90744   TCGGATCATGAGGGG              CGGGCGA GTT TCGCGTG              TTGTTTAGAAAGAGA  59 1
GII90_RS03500  671750 ..  671779 +  -2.1  -4.04353   AACGGCCTTGCCAAA       GAGGGCGGA-GCGA GCT TCATATCTGTCCTC       GTTTTTTTCTGTGTC  53 113
        guaA  673384 ..  673415 + -12.4  -5.24515   ATCAATTAATGGAAA      CCATCTTTTTGGCA ATTT TGCCGGGAAGATGG       TTTTATTTGTTTATT 100 43
        pbuG  675081 ..  675100 + -13.6   -5.7946   ATAAGGAATGAAAAA            CCAGCTGC ACTG GCAGCTGG             TTTTTTTGTTGCAAA 100 37
GII90_RS03515  676092 ..  676109 + -11.3  -5.71712   GCTTTAATGAAAAAA             CCGGCTA ATCC TAGCCGG              TTTTTTTATGTCACA 100 34
        fbpA  676430 ..  676447 +  -5.5  -5.85244   GATATAAAGAGGTGA             GTCTGCT GAAA AGCGGGC              TTTTTTGTTTTGATT  91 46
GII90_RS03525 NONE
GII90_RS03530  677606 ..  677651 +  -4.1  -5.86976   ACGATACATGTACCA TGCCCGGTTTGTATTGC TTCCTCATAAGT GCAATGCAGAGCGGGTA TTTTTTATTTTCTGA  90 257
        purE NONE
        purK NONE
        purB  680612 ..  680632 +  -3.9  -3.28712   TTTAGGTTTAGCATA            GAAGAAGCT TTT AGCGGCTTC            TTCTAAGCCGCCGCA  48 25
GII90_RS03550 NONE
        purS NONE
        purQ NONE
        purL NONE
GII90_RS03570  685977 ..  685996 +  -6.4  -4.40003   GAAAAATGACATAAA            GGCAGC GCAGTTCG GCTGCC             TTTCTCTTTCTGCCC  76 46
GII90_RS03575 NONE
        purN NONE
        purH NONE
        purD  690512 ..  690530 + -11.7  -5.55769   AATAAGTGAGGAAAA             CCCGCAG AATAG CTGCGGG             TTTTTTGTTATCAAA 100 36
GII90_RS03600  692360 ..  692384 + -13.7  -4.39571   TGGGCATAAAAAAAA          GCTTGATCACG TTT TGTGATCAAGC          TTTTCCATTTATCCG 100 7
GII90_RS03610 NONE
GII90_RS03615 NONE
GII90_RS03620  695835 ..  695859 + -13.6  -4.55295   CTTCCAAATAAAAAA         CCGCCC-TGCC GTCT GGCAAGGGCGG          TTTCTTTATGAAACA 100 30
GII90_RS03630 NONE
        pcrA NONE
        ligA NONE
GII90_RS03645  703918 ..  703942 + -18.7  -5.09762   ATGACTGATAGAAAA          CCCTTGTGCCA TAT TGGCACAAGGG          TTTTTATGTTACAAT 100 33
GII90_RS03650  705092 ..  705117 + -14.1  -4.53163   GTGTAGATAGAAAAA         GCCAATGGGAT TCCA GTCCCATTGGC          TTTTATAATGTATCA 100 35
        gatC  708114 ..  708127 +  -2.4  -3.01162   CTGGACTAAAGGAGG               GACA CAAGAA TGTC                ATTATTTGATCATAA  42 32
        gatA NONE
        gatB  711032 ..  711049 +  -8.4  -5.67063   AACGCTAATAAAAAA             GCAGCC CTTAGA GGCTGC              TTTTTTTATGGTCAA 100 33
GII90_RS03685  715209 ..  715227 + -14.6  -3.72051   AGTAAAAAACAAAAA             GCCTCAGC TCT GCTGAGGC             TTTCAGCTTGTTGAA 100 36
GII90_RS03690  716462 ..  716506 + -16.1  -4.12902   AGCCAAGCTCAGAAT GTTGACAAAATCCTAAAAC AGTTTTC GTTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 55
        rlmD  718367 ..  718395 +  -4.7  -5.05228   TAACACCATTAGCAA        GAGAGATAACT AAATTGG ATTTATCTCTC        TTTTTATCGTTTAAT  77 325
GII90_RS03705 NONE
GII90_RS03710 NONE
GII90_RS03715 NONE
GII90_RS03720  725063 ..  725073 +  -5.4  -3.93583   AGATGAGATTGTGAT                 GATG GTT CATC                 TTTATGACTAAATTA  63 4
GII90_RS03745  729910 ..  729924 +  -5.7  -4.72201   ATAGAATGACAAAGA               CCCTT GCATA AAGGG               TTCTTTTTTATGAAA  75 53
        rapH NONE
        phrH  731326 ..  731340 +  -7.1  -5.24551   AGTGATCAGAAGAAA               GCCCT TAGCT AGGGC               TTTTTCTTGCTTTAC  90 14
GII90_RS03760  732224 ..  732242 +  -8.8  -5.60993   GTGAGTAAGGAGTGA             GCAGGCTG TTA TGGCCTGC             TTTTTTTGTCCCGGA 100 33
        yeeK  732811 ..  732831 +  -9.8  -5.63857   ATGATAAAAAGAGGA            CACTCTTG CAGAT CAAGAGTG            TTTTTTTAGCTTTTT 100 49
GII90_RS03770  733487 ..  733513 +  -6.7   -3.1458   TCAGTGCTTGATTAA        CATGTGGTAAAG GATT CTTTGCC-CATG         TATGTACTTTTTGGA  61 26
GII90_RS03775 NONE
GII90_RS03780  734874 ..  734896 + -13.5   -3.9461   TGAATAGTCTAGAAA           GACCTTCGG CGCTT CCGAAGGTC           TTCTTATTGAAAAAG 100 34
GII90_RS03785 NONE
GII90_RS03790 NONE
       cotJC  736131 ..  736146 +  -4.7  -3.41229   AAAATGGTCTGTTTT              TGCAG TTTGGT CTGCA               TTATAATCAAGGTGT  55 85
GII90_RS03800  736739 ..  736756 +  -3.3  -5.69068   ATTACGGCAGAATAA             GCGTCCT TTGC AGGGGGC              TTTTTTGTCTTTTTC  84 26
GII90_RS03805 NONE
GII90_RS03810 NONE
        yesM NONE
        yesN  740620 ..  740652 +  -4.2  -5.58209   GAATTCAGAAGAAAA     CAGGGAGGCGCT-TCC GCA GGATAGC-CATCTCTG     TTTTTTTGACTTTCG  84 2
GII90_RS03825 NONE
GII90_RS03830 NONE
GII90_RS03835 NONE
        yesR NONE
        yesS NONE
GII90_RS03850 NONE
GII90_RS03855 NONE
GII90_RS03860 NONE
GII90_RS03865 NONE
GII90_RS03870  753146 ..  753159 +  -2.3  -3.60048   GAACCAATGCTCAAG               CGCTG TACG CACCG                GTTTTTTCAAGGGAA  47 106
GII90_RS03875 NONE
        yesZ  755871 ..  755894 +  -6.8  -5.36441   AATTTGACAATCACA          GCTGATTC TTTGTATC GAATCAGC           TTTTTTCTATGGAGG  91 21
GII90_RS03885 NONE
GII90_RS03890 NONE
GII90_RS03895 NONE
GII90_RS03900 NONE
GII90_RS03905  763382 ..  763399 +  -2.7  -3.71649   GCATCATGCAAAGCT             GAGCT TGCCGATT AGCTC              TTTCCGGTTTAGAAA  50 24
GII90_RS03910  764175 ..  764194 +  -8.6   -5.2204   GACTCTTAGAAAAAA            GCTTGCAGC AAG GC-GCAAGC            TTTTTATTGATTGTA 100 39
GII90_RS03935 NONE
GII90_RS03940 NONE
GII90_RS03945  768714 ..  768732 + -12.4  -5.32699   GAAAAGACGCTATAG             CCTGTCCG GAT CGGACGGG             TTTTTTAGTCTTTAA 100 26
GII90_RS03955  770522 ..  770543 + -11.7  -4.89233   TATTAAATAGGAAAA           GTCCAGAAA GTGA TTTCTGGAC            TTTTTAGTCTTGCTC 100 35
GII90_RS03965  774961 ..  774978 +  -9.9  -4.84363   GATATAGATAAAGAA             GACTGGA GACA TCCAGTC              TTTTTAGTCCTTTCG 100 34
GII90_RS03970  777328 ..  777364 + -19.5  -5.68023   AAATAAGATGAAAAA    GAGCCTTGAGCGGGCGC ATT GCCTTCGCTCAAGGCTC    TTTTTTTGGTTATAC 100 35
GII90_RS03975 NONE
GII90_RS03980 NONE
GII90_RS03985 NONE
GII90_RS03990 NONE
GII90_RS03995  782377 ..  782396 +   -15  -5.07567   GCTGGATTAAAAAAC            CCCCTGCC GCCT GGCAGGGG             TTTTTTCAGCTATGC 100 31
        yfmT NONE
GII90_RS04020  788498 ..  788545 + -15.7  -2.66272   CGAAAAAGCGCTTGA GGAAGAGTAAGAGACCGGGGA CAAACA TCCCCGGTCTTTTTCTTATCC TGCATTTCCATGAAA 100 16
GII90_RS04025  790535 ..  790556 + -10.8  -5.44721   CTGGAAAGCTAAAAA           GCGTGGCC GCAGCA GGCCGCGC            TTTTTTTCACATAAT 100 29
GII90_RS04030  791115 ..  791138 +  -3.1  -5.80727   AACAGGAAAGTGAAA          GACGGGT-GC TGTAT GCTGCTCGTC          TTTTTTATTGTTTTT  88 40
GII90_RS04035  791661 ..  791676 +  -5.4  -4.72007   GAAAAGTTTGTTAAA              CGCTAT TTTT GTAGCG               TTTCTTTTAATGGAA  75 39
GII90_RS04040  792912 ..  792933 + -10.9   -5.2204   GCATTAATAACGAAA           GACACTGCG CATA TGCAGTGTC            TTTTTATTCGTTATA 100 34
GII90_RS04045  793437 ..  793456 +  -7.8  -5.66684   AATGGCAGTAAAAAA            CCCGCC CTTTAGCA GGCGGG             TTTTTTTATAAATTA 100 113
GII90_RS04055  796335 ..  796347 +  -6.2  -5.88565   ACGAAATAAAAAGAA                GGGC GAAGA GCCC                TTTTTTTGTTGTAAA  93 32
GII90_RS04060  796861 ..  796879 + -11.7   -2.5497   CATCGAAACACAAAA             GGAGGGC AAAAA GCCCTCC             CGTTTTCATCTTCAT  80 44
GII90_RS04075  801471 ..  801503 + -13.7  -5.10933   GTGTAGTAATGTTCA      GCTTGTAGAAAAAAC AAT GTTTTTTCTACAAGA      TTTTATTTTAAATGC 100 81
GII90_RS04105  806901 ..  806926 + -13.4  -5.46629   AAAGCAAGGAAAAAA         CCAAAAGGCC AATGTC GGCCTTTTGG          TTTTTTTGCGGTCTT 100 39
GII90_RS04110  808353 ..  808375 +  -9.2  -5.32565   TAAGAAAGTGAAAAA           CACAAAGGGT GCT AACCTTTGTG           TTTTTTAATTAATTA 100 38
GII90_RS04115  809913 ..  809929 + -12.3  -6.09196   TGGTAGAAAGAAAAA              GGCAGAC GCG GTCTGCC              TTTTTTTATTTTCAC 100 35
        yflR NONE
        yflQ NONE
GII90_RS04130  813275 ..  813290 +  -6.1  -5.52384   GACAGGAAATTAAAA              TCCCG ACATCC CGGGA               TTTTTTTCATGCCGA  91 28
        citM  814820 ..  814832 +  -2.7     -2.89   AACATTCCGGAGGTG                TCATT ATG AGTGA                TCCTTATATGCCGCT  42 76
GII90_RS04140  815620 ..  815638 + -11.7  -5.77677   TTATCGTCTATTTGA             CACCCGC ACCAC GCGGGTG             TTTTTTATTGTTTTC 100 26
GII90_RS04145  816977 ..  816988 +  -5.8  -4.56597   AAAATCTCGACACGC                CCGT CATC ACGG                 TTTTTGACCCAGCCG  72 173
GII90_RS04155  817834 ..  817857 + -11.7    -3.695   GTTGAATAGAAAAAA          GCCGCGCAT ATCAAC GTGCGCGGC           TTTGCCATATTTAAG  91 32
GII90_RS04180  821104 ..  821125 + -15.9  -5.42164   CTGTCAAATAAAAAA           GCGGAGAGG GCAA CCTCTCCGC            TTTTTCTTATTTATC 100 30
GII90_RS04190 NONE
GII90_RS04195  823746 ..  823770 +  -7.1   -5.0916   TTTGTCTTGTCTGCA          GGATGGCGATT GAT AAAAGCCATCC          TTTTTATGTTCCAAG  90 41
GII90_RS04200  825729 ..  825741 +  -3.3  -3.53012   AATGGTGTATTTTAG                CGGGA CGC TCCGG                TTTGAGAAGAGAAGC  50 484
        treP  830869 ..  830904 +  -4.7  -4.36595   AACATAAATAACAAG    TGGGGAGCGGG-ACGT GTTGA ACGTTCCCTTTTCCCG    TTTTCAATTTAAATA  68 30
        treC NONE
        treR  833363 ..  833384 + -12.3  -5.69793   GGGGAAATGAGAGAG           GCGC-CTGCC TGC GGCAGCGCGC           TTTTTTGTTTGGTAT 100 31
GII90_RS04240  834170 ..  834194 + -14.3  -5.28778   GGGTTTAAAAGAAGA          AAGCTGCTCGC ATA GCGAGCAGCTC          TTTTTTATGCCTGAT 100 33
        yfkM  839356 ..  839375 + -11.4  -5.87996   AGAAATAAGAAAAAA            CGGACGCT CTTG GGCGTCCG             TTTTTTTGTTGCTTA 100 33
GII90_RS04265 NONE
GII90_RS04270 NONE
GII90_RS04275  842915 ..  842939 + -16.5   -4.8622   ACCATTAGCATAAAA          GCCTCCTGACA TGA TGTCGGGAGGC          TTTTTGATTAAGAAG 100 192
GII90_RS04285  844284 ..  844294 +    -4  -2.93816   TAAAAAAGGAGCTAT                 TTCA CCA TGAA                 TCGTATCTTTTTTAT  47 16
GII90_RS04290 NONE
GII90_RS04295  846219 ..  846239 +  -9.8  -6.08342   AAGATAAATAAAAAA            CTGATTCC AACTC GGAATCAG            TTTTTTTGTTTATTG 100 34
GII90_RS04310  848546 ..  848562 +  -6.5  -5.80364   AGATTGGGAATAAAA              CCGCG TGCCCGC CGCGG              TTTTTTTATTGGCAT  93 28
        pdaA  849440 ..  849471 +  -9.5  -4.79683   CGTCTTTGTAAAAGA      GAAAGACCTCTCC TTAAAC GGAGAGGCTTTTC       TTTATTTTATACATT 100 30
GII90_RS04330  852440 ..  852460 +  -9.8  -2.55351   GAAAAAACCATTTCA            CTTTCTGC CATCC GCAGAAAG            CTTCATATAGAAACG  73 92
        rlmD  853927 ..  853968 +  -2.2  -4.72272   TAGTTTTCCTAATAA GACCTGGATTTCGGTA AAATAAACAA TTCCGATTTCCGGGTC  TTTTTCGTGCGCAGC  64 65
GII90_RS04340  854851 ..  854874 +  -7.5  -3.89837   TATCTTATGAGTGAA          GACTGC-GAC ACTTA GTCAGCAGTC          TATTTTATGGTTCTG  74 97
GII90_RS04345  856556 ..  856582 +  -5.9  -5.24129   TTCTTGACTAAAATA         AACCTGGATTT TCGGT AAATCCGGGTC         TTTTTTGTACGCAGC  83 93
GII90_RS04350 NONE
GII90_RS04355  857896 ..  857914 +  -8.8  -5.82316   TCGATCATTGTCAAA             GGCCGGGT GAT ATCCGGTC             TTTTTTTTGCATGCT 100 66
        acoA NONE
        acoB  860099 ..  860111 +  -3.3  -3.17075   CACGCTTGAATTGCT                TGGCG AGC CGGCA                TTGAATTAAAGGGGG  47 4
        acoC NONE
        acoL  862739 ..  862765 +  -9.4  -5.64873   ATAATAAAGGAAAAA         GCAGGCGCAT GGATATA AGGCGCCTGC         TTTTTTATTGTTGAA 100 37
        acoR NONE
GII90_RS04385  864901 ..  864923 +   -12  -4.77165   AGGATTAAACAAAAA           TGGCCCGCTT CAT AAGCAGGCCA           TTTTGTTATCCGCGC 100 33
GII90_RS04420  870463 ..  870514 +  -3.9  -2.85668   ATATCATAAATGAAA TTCCCCCATTTTCGAATCTGTAAT TGTAT ATAATAGAAA-GAAAATGGGGGGA TCTGATATGCAGCTC  46 32
GII90_RS04425 NONE
        malP  872890 ..  872907 +  -9.1  -4.55798   AATCAATAAAGACTG             CCCTCCT TTTC GGGAGGG              TTTTCGTTTGCCGTC  90 32
GII90_RS04435 NONE
GII90_RS04440  876518 ..  876540 +  -8.5  -5.80364   CCAATTTGAGAAATA           GACCTTTGT CCTGC ACAGAGGTC           TTTTTTTGTTACAGT 100 25
        catD NONE
        catE  877959 ..  877986 + -14.9  -5.98675   GTGATTTAACTGCAA        TCCCCTTGCCG AAATAA CGGCAGGGGGA         TTTTTTATTTTTGTC 100 32
GII90_RS04455  879035 ..  879046 +  -5.8  -3.79482   CATATGATAAAGACG                CGAG AAAT CTCG                 TTGTCTTATAATCTT  63 70
GII90_RS04460 NONE
GII90_RS04465 NONE
GII90_RS04470  882786 ..  882813 +   -10  -5.45802   AAATGAGGGAATGCG        CCGCATATGA CATAAAGT TCATATGCGG         TTTTTATTTTCCAGA 100 39
        lnrJ NONE
        lnrK  884792 ..  884806 +  -7.1  -5.52986   ACGCTTCTCTGAAAA               GGCCT TTTAC AGGCC               TTTTTTTCATGCCCT 100 60
        lnrL NONE
        lnrM NONE
        lnrN  888215 ..  888235 + -11.2  -5.50499   TCCGAGCCTAAAAAA            CATCTGCC GTTTA GGCAGATG            TTTTTTTGCATGTGG 100 30
        estB  889753 ..  889775 +  -3.4  -5.21709   ATCTTCAAAAAACAA           CCTGCTGT CTCCGTT ACAGTGGG           TTTTTTCGTCTGAGA  73 42
GII90_RS04510  891020 ..  891043 + -12.4  -4.59982   GCAGGGTGAAAAACA          AGCGGCAGGA GGGC TCCTGCCGCG           TTTCTTTACTTCTCA 100 32
        bstA  893660 ..  893672 +  -2.6  -4.27316   CTCGCATGAATGGCG                TCGC TTATC GCGG                TTTTGACTTCAGGAA  58 140
        mprF  898422 ..  898445 + -15.4  -6.01187   GGCAAAAGCAAAAAA          GACTCCGTCT AATA AGACGGAGTC           TTTTTTTATTTCGTT 100 14
GII90_RS04550  900550 ..  900567 +  -4.1  -4.20696   TCGCAAGAAGGGGGG             CGAAGCT ATGA AACTTCG              TTTTGGCGTTACTGC  61 15
GII90_RS04555  901597 ..  901622 + -13.5  -5.55664   TTCTTAATCGTTACA         CCCATTTTCTT AAAA AAGAAAATGGG          TTTTTTTGATAATGA 100 34
GII90_RS04560  902620 ..  902639 +  -6.6  -3.13906   AAGATGCACTTTCCG            TTATCATT ATGA AATGATAA             TCATTTTCAATTGCA  61 61
GII90_RS04565  903261 ..  903287 + -16.7   -4.8622   CTGAAATGTAAAAAA         CCCCTTGTCTC AAACG GAGACAAGGGG         TTTTTCATTAACGAG 100 30
        recX NONE
GII90_RS04590  905839 ..  905857 + -13.2  -5.27335   AATAAAGCGTAACAG             GAGGCTGA TGA TCAGCCTC             TTTTTGTTTGCAGCA 100 36
GII90_RS04595  907169 ..  907189 + -11.2   -4.1023   ATAAAGGGTAAAAAA            CAGCTGCA GTGTA TGCAGCTG            TTCTTCTTTACCGTT  89 30
GII90_RS04605  907747 ..  907768 + -10.1  -5.52347   CTTTTGCATTAAAAA           CCTGCCGTT AACG ACCGGCAGG            TTTTTTCATTTTCTT 100 29
GII90_RS04610  908410 ..  908427 +  -5.5  -4.71061   CAAATGCGATAAAAA             GGCAGGC CGAG GCTTGTC              TTTTTGCCTATGCAT  73 29
        spdL NONE
GII90_RS04620  909691 ..  909709 +  -9.6  -5.01546   AATTTCTCTCCATCC             GTCTGTCA TAA TGGCAGAC             TTTTTCTGTGCGTTT 100 46
GII90_RS04625  910903 ..  910914 +  -2.2  -3.51573   ACTGAAAATACCAAG                C-GCC ATT GGCAG                TGCTTTTTTTGCGTG  47 36
GII90_RS04630  913529 ..  913562 +  -8.1  -5.28826   TTTTATATAAGACGT     AAAAAGCCCGGCTCT ATAT AGAGCCGAGCTTTAA      TTTTTTCTGAAGTTT 100 5
        mutY  915913 ..  915923 +  -2.4  -3.38162   TCATTGCGCTTCATT                 CCGC CGC GCGC                 TTCAATTTCTTGCGT  45 88
        fabL NONE
GII90_RS04655  917258 ..  917282 +  -5.8  -5.56264   CTGAAACAGAAAAAA         GCACTT-CATC TTCG GGTGGAAGTGC          TTTTTTCTGTTTGAA  91 44
GII90_RS04660  917682 ..  917707 +    -9  -5.24291   GTGTAGTGCAGGAAT         GTGCCATTCC CCGGCC GGAATGGCTC          TTTTATTTTCATTTT 100 35
GII90_RS04665  918361 ..  918381 +  -6.9  -4.62336   ATGGTTACGTAAAAA            CCTGTTG CGGGGTA CAACAGG            TTTTTCACATGGGCT  81 40
GII90_RS04670  920185 ..  920214 + -11.7  -5.76633   GAACTAAAACATCAA       TCTTATATCCTTT TAAC GAAGGATATAAGA        TTTTTTTGTATATAA 100 34
GII90_RS04685  923457 ..  923470 +  -3.1  -3.09286   AAAAGTAAATCTCTA               TGAGC CTAT GCTTA                CTTTTACCCTGATAT  45 33
        perR  924008 ..  924046 + -13.4   -3.6834   AAAAAGAAAATCATT   AAAAATAAGCTGACCG CACGAAA CGGTCAGCTTATTTTA   TTTCGACATTTTCTT 100 24
GII90_RS04700  925570 ..  925589 +  -2.2  -2.65751   TAAATCAAAAAAACA            TTTGAC AAAAGAAA GTCAAA             ATGTTATATTAATAA  40 106
GII90_RS04705  927398 ..  927423 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
GII90_RS04710  930472 ..  930488 +  -2.3  -2.84587   AGTTTTGAGAGAATA              AGTTTTT CAA AAAAACA              CTTGATTTTCTCAAG  41 66
         rrf NONE
GII90_RS04720 NONE
GII90_RS04725 NONE
GII90_RS04730 NONE
GII90_RS04735 NONE
GII90_RS04740 NONE
GII90_RS04745 NONE
GII90_RS04750 NONE
GII90_RS04755  931370 ..  931380 +  -2.6  -3.83026   CTCTTGCCGGCACTG                 TTTT TTC AAAA                 TTTAATGTGGAGGGG  52 27
GII90_RS04760 NONE
GII90_RS04765 NONE
GII90_RS04770 NONE
GII90_RS04775  931753 ..  931765 +  -2.7  -3.09933   ACTTTTTATATCAAC                TGCAT ATA ATGTA                TTAAGTCCATTAAAA  43 42
GII90_RS04780 NONE
GII90_RS04785 NONE
GII90_RS04790  932025 ..  932059 + -13.8  -4.52142   AAGTCCGGCCCTCGG     CACCAATTTTACTTAC ATG GTAAGTTGAATTGGTG     TTTGTGTTTTATCAT 100 21
GII90_RS04795  932387 ..  932408 + -13.1  -5.84011   CGGTATACTGAAAAA           CCCGTTTCT TAAC AGAAACGGG            TTTTTATTTTTTATT 100 36
GII90_RS04805  933581 ..  933612 +   -16  -5.00846   TGGAGCAATAAAAAA      GAGACGGCATCTCA TCTT TGAGATCCCGTCTC       TTTTTGTGGTCTTTG 100 30
GII90_RS04815  934890 ..  934913 + -11.8  -5.33785   TCTTTCTGACTGTAA          CCGGGTTCAT TTAT ATGAATCCGG           TTTTTTGTGCTGGTT 100 248
        thiC  936756 ..  936781 + -14.9  -5.40072   TATCAATAAAAAAAA         TGAAGATGGAG AATG CTCCATCTTCA          TTTTTTTAGAAAAAC 100 32
        senS  938583 ..  938600 +  -6.9  -4.84529   CTAAATATAAAAAAA             CCCGCTG ACTA CAACGGG              TTTTTGCATTTCTCC  83 18
GII90_RS04840 NONE
GII90_RS04845 NONE
GII90_RS04850 NONE
        ssuD NONE
GII90_RS04860  944884 ..  944900 +  -7.9  -3.63744   TGCATCATTAGAATG              GGCGGCT TCA GGCCGTC              TGTTTTACAAAGCGG  69 30
        rpsN  945268 ..  945293 +  -9.7  -5.85011   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 33
GII90_RS04880  946236 ..  946272 + -10.3  -5.71712   TACATACGTTATTAA    CGCAGTGTTTCGTTTCT CAG ATAAACGAAGTATTGCG    TTTTTTTATGTGAAA 100 40
        queG  948204 ..  948223 +  -5.8   -5.4251   AGCAGAAGGAAAAAA            CACTTGAGA TCA TC-CAAGTG            TTTTTTCTCTATAAA  89 52
GII90_RS04895 NONE
        trmL  949707 ..  949729 + -15.6  -5.42862   TAAAATAGTGAAAAA           CCCGCTCATC GAT GATGGGCGGG           TTTTTTTGCGGATGT 100 33
GII90_RS04905 NONE
GII90_RS04910 NONE
GII90_RS04915  951912 ..  951933 + -12.3  -5.77677   TCTGTTATACAAAAA           GGGTGCTCT TTCA GGAGCACCC            TTTTTTATTCTTTTC 100 49
        prkA  954140 ..  954164 +   -10  -4.46581   AACCGATAAGCAACG          TGACCCGTCC GAATA GGGCGGGTTA          TTTTGTCCCATTTTC  91 32
        yhbH  955498 ..  955511 +  -5.2  -6.25578   TTTTCGTAATGAAAA               GCCC ATTTCA GGGC                TTTTTTTTATTTAAT 100 32
GII90_RS04930 NONE
GII90_RS04935 NONE
GII90_RS04940 NONE
GII90_RS04945 NONE
GII90_RS04950 NONE
GII90_RS04955 NONE
GII90_RS04960 NONE
GII90_RS04965 NONE
GII90_RS04970 NONE
GII90_RS04975 NONE
GII90_RS04980  963261 ..  963284 +   -14    -5.252   AAACTAATAAAAAAA          GCTGTTTTGC TTAT GCAAAACAGC           TTTTTTGTCAAAATA 100 34
GII90_RS04990  964795 ..  964821 + -11.8  -5.93809   TCTTTCAGATTGGAA         GAATGAATTCGA ACA TTGAATTCATTC         TTTTTTTTCTGAAAA 100 7
GII90_RS05000  967470 ..  967493 +   -14  -5.40072   CGTAACATATGAAAA          CGTGTAATCC AAGA GGATTACACG           TTTTTTTAACGGCCA 100 36
GII90_RS05010  968676 ..  968707 + -15.4  -3.78329   TAACGCTGAATAAAT      GAAAGAAGCCGCACA ATT TGTGCGGCTT-TTTC      TTTGCGTTAATGACA 100 28
GII90_RS05015  969943 ..  969962 +  -2.2  -3.90318   CAGCATAGAAGCTTG            TGCTTT AATCGCGC AAAGCA             TTTGTCGGCTGATGA  53 206
        yhcR NONE
GII90_RS05030  974680 ..  974699 +   -10  -4.71426   CGAGTGACTTAAAAA            GCCG-AGGC AGT GCCTGCGGC            TTTTCTTCATGAAAA  91 29
GII90_RS05040  976132 ..  976157 + -11.3  -4.96848   ATAATCATGCGGCAA         GGGCTTTTCTA TTTT TAGAAAAGCTC          TTTTTGTATCAGAGA 100 37
GII90_RS05045  976687 ..  976707 + -11.9   -4.1822   TTCATTAATAAGAAA            GAGCTTGCA GTG TGCAGGCTC            TTTCTTCACATAAAA  93 33
GII90_RS05050 NONE
GII90_RS05055  979037 ..  979054 +  -9.8  -5.40072   ATAATTCCCAAAAAA             CCCGCC TGAATT GGCGGG              TTTTTTTAAACAAAA 100 37
GII90_RS05060 NONE
        glpP  981502 ..  981512 +  -4.6  -4.46576   CAAATGTTTATGCAC                 CCGT AAA GCGG                 TTTGTTGTGGTTTTT  66 123
        glpF NONE
        glpK  983972 ..  984020 + -21.4  -5.19879   GTCCTGAGATGAGGA GAGACCACAGCA-CCAAAGTGTA AGCA TGCACTTTGGCTGTTGTGGTCTC TTTTTCTATTTACCG 100 81
GII90_RS05080  985729 ..  985752 + -15.4  -4.89063   TTGAGCAATAAATCA          TAACGGGCTG TCTG CAGCCCGTTA           TTTCTTTTTACGTGC 100 30
        pgcA  987613 ..  987637 + -11.5  -5.69262   ATAATTCAAGTATGA          GCTGGGTCATT GTA AATGATCCGGC          TTTTTCTTTTTCTCA 100 37
        yhcY NONE
        yhcZ NONE
GII90_RS05100  990039 ..  990060 + -15.9  -4.62441   CGCAAAAGCAGGAAA           TCCCGGCGT CTAA ACGCCGGGA            TTTGTTTATGTGAGA 100 13
GII90_RS05110  990840 ..  990864 +  -5.6  -4.55887   GGCTCTAATAAAAAA          CTGTACAGCC GTTAA GGCCGCACAG          TTTCTGTTTTTAGAA  73 33
       spoVR  996142 ..  996161 + -12.2  -5.46706   TATTTATAAAAAAGA            GGATGCAG CGTT CTGCATCC             TTTTTATTTTCCAGT 100 32
        lytE  999098 ..  999115 + -11.3  -5.63103   AATTTTTAGAGAAAA             CCCGTTC ATTG GAACGGG              TTTTTTTCATTAGAC 100 39
GII90_RS05150 1001217 .. 1001227 +  -5.4  -2.99972   AATATACCGGTGCCA                 TTCC CGA GGAA                 GTTCTTTCATAACAT  53 3
GII90_RS05155 1002187 .. 1002216 + -14.5  -2.79312   TTTCAACGTAATCAA       CGAAAAACCAGCT CAAG AGCTGGTTTTTTG        TGTGGTGAAAAATTT 100 30
        bcaP 1003842 .. 1003865 + -10.3  -4.79752   TAACCTTTTGATAAA          GAGAGCGGCC ATACA GGCCGC-CTC          TTTTCTGTTCTTGGC 100 38
GII90_RS05165 1005307 .. 1005328 + -13.7  -5.68438   TATCATTTTAAAAAA           CAGGCTCCG TTTC CGGGGCCTG            TTTTTTATTTAATAA 100 30
GII90_RS05175 1007293 .. 1007310 + -11.3  -5.00616   GGTATAACGAAAAAA             GACGCCT GAAA AGGCGTC              TTTTTTAAAAGCCAA 100 34
GII90_RS05195 1010348 .. 1010367 +   -10  -4.70879   GGAAATATAACAAAA            GCTGAGGG CGAA TCCTCAGC             TTTTTGGCGTTTAAA  91 31
GII90_RS05200 1011111 .. 1011144 + -14.1  -3.54743   CTGAAACTGTGAAAA     TAAGAAAAGCACCCT ATAC AAGGTGCTTTTCTTA      TTATGCTTCCTGCTG 100 60
GII90_RS05215 1014324 .. 1014348 +  -8.7  -4.96848   AGAAGGCAAAGAAAA          GAAAACAGTTT TCA AGGCTGTTTTC          TTTTTATATCCGCAA 100 40
GII90_RS05220 1016005 .. 1016029 +  -7.2  -5.84432   TGCTGAACAGTGCAA          CCTTGAGC GAGAAATAA GCTCAAGG          TTTTTTTATATTGTG 100 9
GII90_RS05240 1017885 .. 1017903 + -17.4   -4.4767   TGAATTGAGAAATGA             CCCCGGCG TTT CGCCGGGG             TTTTGTGCTGCATAA 100 68
        mscY 1019113 .. 1019137 +  -8.6  -4.77036   CGGGCTTAAAAGAGA          GACTTCGTCT GACAG AGGCGGAGTC          TTTTTCATGGTAAAA 100 32
        srtN 1019916 .. 1019938 +  -9.1   -5.5112   TTTGGGCATGAAAAA           GTGAGCCGC TTTAT GCGCCTCAC           TTTTTTATTCATGAA 100 22
         dat 1021939 .. 1021963 +  -7.9  -5.75538   AATGAACGAAGAAAA         GAG-CCCGCT TTTTAC AGCGGGGCTC          TTTTTATTTTTTAAC 100 40
GII90_RS05275 NONE
        bmrC NONE
        bmrD 1028186 .. 1028207 + -11.7  -5.07011   CATAACGCTCAAAAA           CCCAAAACA ATCG TGTTTTGGG            TTTTTGGTTTATGTA 100 36
GII90_RS05320 1033818 .. 1033832 +    -5  -3.51785   GCAATGATGAAAGGA               GCTATT TAC AATGGC               TGTTAATTTTTATGA  57 108
GII90_RS05325 1034191 .. 1034212 + -11.7   -5.4833   GGCTAATAAGCAAAA           TCCCTTCTT GGAT AAGAAGGGA            TTTTTTATTCACTCA 100 35
GII90_RS05335 1036655 .. 1036683 + -11.7  -5.03145   AACGTGTGTAAAAAA       GCCGCTCGCGCC CTGACA GGTGCG-GCGGC        TTTTTTGCCGGATTG 100 30
GII90_RS05340 1038258 .. 1038279 + -14.5  -5.65177   TGAAAAAACGACAAA           GCAGCACTG ATTA CAGTGCTGC            TTTTTTTATCCCTGT 100 16
GII90_RS05360 1041348 .. 1041390 + -12.3  -2.54896   AAGCGTAACAGATCA GCCGGAAAGCTGATCATCTGT GAA ACAAA--ATCAGCTTTCCGGC TGCATTGACTAAACG  82 33
GII90_RS05370 NONE
GII90_RS05375 1043830 .. 1043851 + -12.3  -4.67607   AAACTGATTGGAAAA           CAGCCTGGG GATT CTCAGGCTG            TTTCTTTATTGACAG 100 34
GII90_RS05380 1045156 .. 1045166 +  -2.4  -3.63305   TGCTTGATACATGAG                 GCGG TGA CAGC                 TTTGCGAATTATATC  47 27
        sbcE 1048026 .. 1048042 +  -5.2  -2.78463   TGCATTTCATAGCAG              CCAAAT CATCC ATTTGG              TGTCATAAAAGAGGT  50 1
        yhaM 1049077 .. 1049106 + -11.6  -4.76644   TAAATAACTTAAAAA       GGACTGATGCTGA CATAT TCAGC-TCAGTCC       TTTTTGATGCGTCTT 100 34
        yhaL 1049411 .. 1049437 + -22.4  -6.01369   CATCGCATAAAAAAA         GCTGTGCGGCTC AAT GAGCCGCACAGC         TTTTTTTATTATTTA 100 31
       yhzE1 1050580 .. 1050604 + -10.8  -4.68908   TACTAAGCAGCCCGA          GGATCGCTTG CAACA TAAGCGATCC          TTTATTTTCACTAGC  95 35
       yhzE2 1050795 .. 1050821 + -15.3  -4.59293   AATCAACATAAAAAA         GCATAGCTGCT TAATC AGCAGCTATGC         TTTCTTTCGTATTTA 100 39
GII90_RS05425 1052328 .. 1052343 +  -6.8  -2.79302   TTTCCATAAAATCAT              CGCCGT AGAT ATGGCG               TATCATACACATCAT  55 162
GII90_RS05440 1053693 .. 1053714 + -10.1  -4.53705   CTCTGTTCAAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTGACAATT  91 64
        ecsA NONE
        ecsB NONE
GII90_RS05470 1059201 .. 1059226 + -11.9  -5.64274   GGATATTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTTATAGCTGA 100 12
GII90_RS05495 NONE
        hemE NONE
        hemH NONE
        hemY 1068695 .. 1068714 + -10.7  -5.58454   TTTATTCAGCTAAAA            CCTCCGC TTTATC GCGGAGG             TTTTTTTGATGTGCA 100 28
GII90_RS05515 1069396 .. 1069420 +  -4.4  -4.32857   TTGTATGTTGTCAAA         GGATTGTC-AG CGAA CTAGATAATCC          TTTCTCTTTGCAAGA  63 8
GII90_RS05520 1071819 .. 1071844 + -13.5   -5.8187   CTTCATAAAGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTGTTACATC 100 33
GII90_RS05530 1073863 .. 1073878 +  -6.2  -5.34365   GTGTTTTTTACAAGA              GAAACA ATGG TGTTTC               TTTTTCTTCTTCTCG  91 155
GII90_RS05540 NONE
GII90_RS05545 1075611 .. 1075636 + -17.6   -4.4078   TTAAAGATTAAAAAA         GCCTGCGGGG CAAGAA CCCCGCAGGC          TTTTCATTAACCAGA 100 30
GII90_RS05560 1078231 .. 1078241 +  -2.4  -2.77135   TGTGGGAAGGATAAA                 GGAG GAG CACC                 ATGTTATTTATAGAC  41 27
GII90_RS05565 NONE
GII90_RS05570 1079956 .. 1079981 +  -6.2  -5.90231   CTATGACAGTACTGA         CACTC-AGGGC TTTTT GCTCTTGAGTG         TTTTTTTCTGTTTCT  93 35
        lcfB 1081607 .. 1081639 +   -18  -4.26079   TTTGCCCCAATAAAA      TGAAAAAGCGAAGC GGTTA GCTTCGCTTTTTCA      TTTTCAATCCTTTGC 100 28
GII90_RS05585 1083471 .. 1083496 +  -9.1  -4.93316   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTACTATTATTG 100 29
GII90_RS05595 NONE
GII90_RS05600 1086608 .. 1086637 + -11.6  -5.24129   GCTTTAACAGGATCA       GCTTGCAGAGAA TGTTAT TTTTCTGCAAGC        TTTTTTGTGGACAGG 100 34
GII90_RS05605 1087795 .. 1087812 + -11.3  -5.39905   AGAAATAAAAGAAAA             GACAGGC AAAC GCCTGTC              TTTTTCTTATTTGAT 100 33
GII90_RS05640 1095645 .. 1095665 + -14.1  -3.71888   AACGGATAATAAAAA            GCCAATCCT TGA AGGATTGGC            TTATTCGCTCTGCTT 100 32
        comK 1096782 .. 1096806 + -11.4  -3.74251   TTAGAAAAATAGGAA          GGAGCTGACC GAACA GGGCAGCTCC          TTTCATAAAGCTATG  91 37
GII90_RS05660 1098204 .. 1098241 + -15.3  -2.71144   CCTGTGAACGGTAAA   TAAGAAAAAGCAATCTGG TGT CCAGATTGCTTTTT-TTA   TGCTTAGGCCGCCTG 100 27
GII90_RS05680 NONE
GII90_RS05685 1101850 .. 1101867 +  -7.1  -2.51393   GAGCTATAATCAAAA             TTGTTAC CTGT GTAACAA              AATTTATATATTTTT  60 111
GII90_RS05690 1103447 .. 1103457 +    -4  -3.88498   CAGCCGAGTATAATT                 CAAT TCG ATTG                 TTTCATCTGTAACAA  56 28
GII90_RS05695 1104053 .. 1104070 + -11.3  -4.88295   TTTTTAAATAAAAAA             CACGCAC TGCG GTGCGTG              TTTTTCGCTTTGTTT 100 30
        ntdR 1109832 .. 1109852 +  -5.5  -4.68593   TTTATATAAGAAAAA            GAGGTTA TTCATTT TAACCTC            TTTTTCAATCGTAAG  73 70
GII90_RS05735 1114312 .. 1114333 + -10.2   -5.0538   CTGTCCAAATAAAAA           GAGGGTTC TTTTTT GAACCCTC            TTTTTTACGCTGCCA 100 29
        addB NONE
        addA NONE
        sbcD NONE
        sbcC NONE
        hlpB 1127490 .. 1127516 +  -8.8  -4.51196   AAAAATGACTAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCGTTTCCA  90 33
GII90_RS05815 1132185 .. 1132206 +  -4.3  -5.32882   GCTGAATAAAACTGG           AGGGCGG ACCCGGAC CCGCCCG            TTTTTTCTGATAATC  81 36
GII90_RS05820 1132664 .. 1132684 +    -9  -6.15717   GAAAAACCTATGAAC            CCGGCTCT TTGAT AGAGCTGG            TTTTTTTTATATTTA 100 43
        wprA 1135506 .. 1135524 + -11.7  -5.63517   AAAAGTAACCAAAAA             GCGGTGC TCGAT GCACCGC             TTTTTTATTTGCGCC 100 33
        asnB 1138158 .. 1138194 +  -6.1  -5.24129   AGATTTAAATAAGAA   GGATAGAT-GAGCA GGGAAATATA TGCTCTATCTATCC    TTTTTTGTACAACAG  83 77
        farP 1139778 .. 1139798 +  -6.8  -3.03243   GATATCTAAAAAACA            CCCGGC CTTGATTGA GCCGGG            TGTTACGCCATACCT  60 32
GII90_RS05855 NONE
        degA 1143188 .. 1143203 + -10.4  -5.32944   CGCTCAACACATGAG              CCCGCT AATG AGCGGG               TTTTTTCATTATGAC 100 27
        iolX 1144463 .. 1144484 + -11.6  -4.52142   CTTTCCGCAAAAAAA           GCAAGGGC ATTTTA GCCCTTGC            TTTCTCTTTTCTCAT  95 65
GII90_RS05880 1147604 .. 1147617 +  -5.9  -3.76402   TGTGAATGACAGCCC               CGCTG AAAT CGGCG                TTTGATAAATCGCAT  61 413
GII90_RS05890 1148882 .. 1148897 +  -6.1  -5.42131   ACTCATAAGAAAAAA              CCCGA CATTGA TCGGG               TTTTTTATATAATTC  89 33
GII90_RS05910 1152351 .. 1152361 +    -4  -2.55361   CAACGATAGAGAGGG                 TCAT AAT ATGA                 ATGATTTTTCACTAG  45 15
GII90_RS05915 1153127 .. 1153157 +  -8.3  -2.96205   TGTAAAATAGCGGCT      GCGG-GGCTCTCGT CGTG AAGAGAGCCTCTGC       CTATTATTTTTTATG  67 36
GII90_RS05955 1161428 .. 1161460 + -17.8  -5.76633   AAAATAGCATGAAAA     CGGCTCGC-CTGCAG CAGA CTGCGGAGCGAGCCG      TTTTTTTATGTCTAG 100 34
GII90_RS05975 NONE
GII90_RS05980 NONE
GII90_RS05985 1164931 .. 1164960 + -13.7   -5.0133   AGTAGAGTAGAAAAA       GAAGGGCAGAG CGAAATAT CTCTGCCCTTC        TTTTTTGGGAAAATA 100 31
        nprB 1166675 .. 1166726 + -24.3  -4.63218   GCTGTCGGCATTCTA TGAGCAAACAAAAACAGTCAGGAC ACAGA GTC-TGACTGTTTTTGTTTGCTCA TTTTCTTAAAAAGAA 100 23
GII90_RS06000 1168568 .. 1168586 +  -5.2  -3.45023   TGACGAAAGCAGGTG             GAAGTCGT GAA ACGGCTGC             TTGTGATGCTCCTCC  55 38
GII90_RS06005 1169032 .. 1169054 + -17.8  -5.80364   TGAAGTCAAATAAGA           GGCTATGGCG AGT CGCCATAGCC           TTTTTTTATTGCAGT 100 28
GII90_RS06020 1171205 .. 1171219 +  -2.8   -2.6563   TGAATGGTTTGAAAC               GTACTT ATA AAGCAC               TAAGTTATTAACAAG  41 16
GII90_RS06025 1171596 .. 1171621 + -11.9  -5.03314   CAATAAAACAAAAAA         GGACAGCCTGA CATG TGAGGCTGTCC          TTTTTTACAGCTGAA 100 35
GII90_RS06030 NONE
GII90_RS06035 NONE
GII90_RS06040 1173844 .. 1173864 + -15.5  -5.61596   TGATGATGATGAAAA            CAGGCTGAC GCG GTCAGCCTG            TTTTTTTATGCGGCT 100 18
GII90_RS06045 NONE
        argJ NONE
        argB 1177115 .. 1177131 +  -5.1  -3.91716   GTCAAAGCAAAGGAG              GCTGTTT CAT GAGCAGC              TTGTTTCAAACCTAC  61 14
GII90_RS06060 1178265 .. 1178279 +  -3.5  -4.08666   AATCGCTCATCATTC               CGCTG TAAAC CAGTG               ATTTTTTTTCGATAT  57 10
GII90_RS06065 NONE
GII90_RS06070 NONE
        argF 1183438 .. 1183458 + -11.2  -5.52384   GGAATCATCAAAAAA            CTGCTGAG CCAAA CTCAGCAG            TTTTTTTGATGGCAA 100 19
GII90_RS06080 1183721 .. 1183743 + -10.7  -4.92239   GTGACCACTAAAAAA           CCCAAAACA ATAAA TGTTTTGGG           TTTTTGGCTTTTTAA 100 37
GII90_RS06090 1184939 .. 1184962 +  -8.8  -5.07652   AGAATATAATGACAA          CAGCCTTCTC TTTT GCGGAGGCTG           TTTTGTTTTGGGAAA 100 41
GII90_RS06095 1185650 .. 1185665 +  -3.2  -3.48981   AAAGGAGTTGAACAT              GACTTG ATCA CAAGGC               TTGTCATGATCTTTT  50 113
         med NONE
GII90_RS06105 1186819 .. 1186838 + -10.8  -4.18697   ACAGAATAAGAAGAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  90 32
        fabH NONE
        fabF 1189459 .. 1189483 + -17.9  -6.02914   CATAATCAAGCCAAA          CCGGCTGCCCT TAA AGGGTAGCCGG          TTTTTTTTGTGTGCA 100 36
GII90_RS06125 NONE
        appD NONE
        appF 1192450 .. 1192461 +  -2.2  -2.96164   GCTCCCAGCCACTTT                GTGG CTTG TCAC                 CTTTATAGCTAATGT  42 2
GII90_RS06140 1194208 .. 1194229 + -10.9  -4.11027   ATTTCCCTTAAAGGG           GAGGGAGAG CGTT TTCTCCCTC            TTCTGTTTTTAATAA  89 41
        appB NONE
        appC 1196313 .. 1196325 +  -3.4  -4.84359   TATCCCTTGCCTATA                CTGT GGACA ACAG                TTTTTATAAAAGTGA  67 192
GII90_RS06155 1197110 .. 1197129 + -12.2  -5.27477   GTCAACTGAAAAAAA            CCGCTCTT TGCA AAGAGCGG             TTTTTTGATTAGCGT 100 32
        oppA 1200540 .. 1200568 + -13.3   -4.2704   AATAAAAGACCTCAA        GGTATATGGGG AGAAAAG CCCCATATACC        TTTCTTACTGATGGA 100 54
        oppB NONE
        oppC NONE
        oppD NONE
        oppF 1204484 .. 1204509 + -14.9  -5.52909   TTCATGATTCATCAA         TCCTTCAAGAG ATTT CTCTTGAAGGA          TTTTTTTGCGTCTTC 100 34
GII90_RS06190 1205818 .. 1205834 +  -9.4  -4.25104   ACACTTCAAAATGAA              CGGAGC AGCTG GCTCCG              TTTTGCTGAAAAAAA  86 44
GII90_RS06195 NONE
         spx 1207131 .. 1207162 + -13.2  -4.60487   AATAGATCGTATCAT      CAAAAGAAGGCTGA GTCA TCAGCCTTCTTTTA       TTTTTCAACCTGCTG 100 39
GII90_RS06210 NONE
        mecA 1208754 .. 1208775 + -13.1  -5.93809   TTGCATCATAGCAAA           CCGATTTCC TTCC GGAAATCGG            TTTTTTTTATGCACG 100 30
        coiA NONE
        pepF 1212129 .. 1212153 + -12.9  -5.01732   GTCTTAAAAAAGTAA          GCCTGTGCG GAAATGA CGCACAGGC          TTTTTTAAAACCCTT 100 34
GII90_RS06260 NONE
        yjbM NONE
GII90_RS06270 NONE
GII90_RS06275 1218385 .. 1218407 +   -15  -5.36441   AGCAAACTGATAAAA           GGAGAGAATC ATT GATTCTCTCC           TTTTTTATATGGGGC 100 11
GII90_RS06285 1221421 .. 1221444 + -11.8  -6.09196   TATGCCAATTCCAAA          CCACTTTTCC TTGC GGGAAAGTGG           TTTTTTTATTTTCAG 100 221
        tenA NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG 1224815 .. 1224829 +  -6.4  -2.87132   AACGGCAAGCAGTCC               GGGAGA AGG TCTTCC               TGTATGACAGGCAGG  58 4
GII90_RS06315 NONE
        thiD 1226676 .. 1226700 +   -13  -4.37711   TAAATACAAGCCGAT          GAGATCACCA GCTGA TGGTGATCTC          TTTTGCGTTTGCTAC 100 24
        fabI 1227606 .. 1227626 + -11.2  -5.82036   CAGGATCTATATCAA            GCAATCCC GAATA GGGATTGC            TTTTTTATTTCTTCT 100 42
        cotO 1228388 .. 1228414 + -10.8  -5.47218   ACGAAAAAGAAAAAA         GCTGCCCGGC TGATGTT GCCGGACAGC         TTTTTTTACATAGAG 100 40
        yjcA 1231758 .. 1231786 +  -9.8  -5.40072   GCCTCAATAGCCTGG       CAAAGAAACCGGA GAAC TCCGGTTT-TTTG        TTTTTTTAACGAGGC 100 225
GII90_RS06365 NONE
        yjcZ 1232288 .. 1232315 + -18.6  -3.31937   TTTAAGATGTATTGA        GGAAGTACGGGT TATA ACCCGTACTTCC         TTGCCTTGTGTTTAT 100 36
      spoVIF 1232715 .. 1232734 +   -15  -2.50016   TTTTTACAGTAAAAA            CCCGGCAG TAAT CTGCCGGG             CTGTTAATGATGCAA  95 76
GII90_RS06385 1235393 .. 1235412 +    -5  -5.71712   GATATGTATAAAAAA            CCGTTC ATACCAGA GAACGG             TTTTTTTATATGCAG  88 30
        metI NONE
        metC 1239808 .. 1239830 + -11.3  -5.00467   CGGTTCGTTAAAAAA           GAAGCCGGG GATAG TCCGGCTTC           TTTTATTATTGTTCG 100 30
GII90_RS06425 1241896 .. 1241912 + -12.3  -5.38497   GAATCATAGCTTAAA              CCCTTGC GCA GCAAGGG              TTTTTTACTTTGCGT 100 33
GII90_RS06435 1244445 .. 1244492 + -10.6  -5.75945   AAGACGGAAAGCCTG CGGACACTGATCGTTTTACAGA GAAA TTTGTGCTTCGATCGGTGTCCG TTTTTTTTCGCAACT 100 68
GII90_RS06440 NONE
GII90_RS06445 NONE
GII90_RS06450 1245388 .. 1245400 +  -3.3  -3.73647   AAATGGGGGGCAGGA                TCGGC GCG GCGGA                TTATTCCTGCGTCAC  52 40
GII90_RS06455 NONE
GII90_RS06460 1246444 .. 1246459 +  -6.8   -5.8187   GATTAAATAATAAGA              GCATCC TGCG GGGTGC               TTTTTTTGTTCCCTG  93 31
GII90_RS06465 1247180 .. 1247198 +  -3.1  -5.74086   AATATAACTTCTAAA             CCTTCCT ATAAA ATGAAGG             TTTTTTATTTGATTT  84 79
GII90_RS06470 1247714 .. 1247728 +  -3.6  -4.36089   TTTTCTATTTAATAT               TTTTTG AGA CGAAAA               TGTTTTTTTAAGCTG  63 122
GII90_RS06475 1248679 .. 1248711 + -12.2  -4.72497   AACTTGAAGCGAAAA     TAAGGTCCCTTCTCT TTTT AGAGG-GGGACCTTA      TTTTATTCATGCATG 100 95
        manR 1251605 .. 1251622 +  -7.7  -5.88565   TTTGGATTATTAAAA             GCAGGGA TTAT TCCTTGC              TTTTTTTGTTATAGG 100 28
        manP NONE
        manA NONE
GII90_RS06500 1255323 .. 1255349 +   -16  -2.72049   GGTAAATAATCCAAA         CAAAAGCAGGCG CAG TGCCTGCTTTTG         TAATTAAGGACTCTA 100 32
        ybaK 1257215 .. 1257235 +  -6.2  -4.60041   TAGGGGAACGAAAAA            GCTTAGTC ATATC GATTAAGC            TTTTTCCGCATCCCT  76 50
        pdaC 1261566 .. 1261585 + -13.6   -5.5762   AAATAAATTAGAAAA            GGCTGTCC GTAC GGACAGCC             TTTTTTCTATTTAAT 100 35
GII90_RS06555 1263393 .. 1263411 +  -3.7   -4.8622   TTCTACATGAAAAAA             GCGTCAC ATACA GCGGCGC             TTTTTGATTCCCAAA  69 31
GII90_RS06570 NONE
GII90_RS06575 1268134 .. 1268158 + -13.6  -5.14563   GAGATTGACCTCCCA         CCCGAGC-GGC TTCA GCCAGCTCGGG          TTTTTTGATGAAAAG 100 33
GII90_RS06580 1268980 .. 1269009 + -14.5  -5.24129   ATGCTAATTTACAGT       TGCACGTTTTTCA TCTG TGGAAAACGTGCA        TTTTTTATAGCGAAA 100 41
GII90_RS06585 1269674 .. 1269695 + -13.1  -5.34555   TATTTGACTAAAAAA           GAAAGAGCC TGTG GGCTCTTTC            TTTTTTATAATGTAA 100 30
        yjiB NONE
GII90_RS06600 1272772 .. 1272792 + -12.7  -4.80455   GTAAAAACATAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATA 100 37
GII90_RS06610 1273988 .. 1274011 + -13.2  -4.64591   TAACAAGTACAAAAA          GCCGCTTTTC CCTC GGAAAGCGGC           TTTTGTCTGTCATTC 100 38
GII90_RS06630 1277433 .. 1277445 +    -2  -4.52502   AGAGAGTAAAGGATT                TTGA CTTAT TCAA                TTGTTTATTTTTAGA  58 210
GII90_RS06635 NONE
GII90_RS06640 1279294 .. 1279338 + -13.9  -5.90231   CCTTTTAATGAATCT GGCATTGCCA-AAAGCATTC CTTTCC GAGTGCTTTCTGGCAATGTC TTTTTTTATGTTTAT 100 42
        uxaC NONE
GII90_RS06650 1282361 .. 1282371 +  -2.6  -2.95102   ATATAATATAAAGAA                 TATT TAA AATA                 ATTTGTAAATAAAAT  43 43
        allD NONE
GII90_RS06660 NONE
        uxuA NONE
GII90_RS06670 NONE
GII90_RS06675 NONE
GII90_RS06680 1288829 .. 1288849 +    -4  -4.06419   CGATTGACGACGTGA           TGTCCCGTT TTTC AGCGGG-CA            TTCTTTATACAGAAA  58 26
GII90_RS06685 NONE
GII90_RS06690 1291846 .. 1291868 +  -9.2  -3.82604   GTTATAATAAGAAAA           GGCTATCC TTCAAGC GGATAGCC           TTCTTCATTAAATCA  83 34
        yjoB 1294756 .. 1294780 + -12.9   -5.4756   TTTCACTAAAAGAAA          GCACGGGTGTT TGA AAAACCCGTGC          TTTTTTGTTGCGGTT 100 32
        rapA NONE
        phrA 1296167 .. 1296180 +  -8.1  -5.80003   TGATGCATAAAAAAA               GACCC TTAG GGGTC                TTTTTTATTTCTTCA 100 38
GII90_RS06725 1297524 .. 1297547 + -15.4  -4.19953   AGCTGTAAATGAAAA          GACGGAAGCT GTGA AGCTTCCGTC           TTTTCGCCTTACATA 100 33
GII90_RS06735 1298618 .. 1298629 +  -2.2  -4.42386   CGATATGTGGAAGCC                GTCA AGCT TGGC                 TTTTATACATAAAAC  58 2
GII90_RS06740 1299564 .. 1299590 + -14.5  -3.46088   TGTTAGGTTCTCTTC         TGGGCTGAGGA ATATA TCCTCAGCCCG         TATTTGATCAGATGT 100 35
GII90_RS06755 NONE
GII90_RS06760 NONE
GII90_RS06765 NONE
GII90_RS06770 NONE
        xkdD NONE
GII90_RS06780 1303419 .. 1303464 + -19.3  -5.63517   AAGACGGAAAGCCTG CGGACACTGATCAACTGCACAG CAT TTGTGC-GTTGATTGGTGTCCG TTTTTTATTTGCCAA 100 66
GII90_RS06785 1304058 .. 1304077 + -11.4  -4.42386   AGAGCATGACACTAA            GCGGCTGG CTGA TCAGCCGC             TTTTATGAATAAACA  95 75
GII90_RS06790 NONE
GII90_RS06795 NONE
GII90_RS06800 NONE
GII90_RS06805 NONE
GII90_RS06810 NONE
GII90_RS06815 NONE
GII90_RS06820 NONE
GII90_RS06825 NONE
GII90_RS06830 NONE
GII90_RS06835 NONE
GII90_RS06840 NONE
GII90_RS06845 1313299 .. 1313321 +   -15  -5.03314   GAATCAGCCCATACG           CAGACCTTTC TCA GAAAGGTCTG           TTTTTTAAAGATGAA 100 49
GII90_RS06850 NONE
GII90_RS06855 NONE
GII90_RS06860 NONE
GII90_RS06865 NONE
GII90_RS06870 NONE
GII90_RS06875 1319909 .. 1319927 +  -4.5  -5.28942   TAAGGTATAGACAAA             CCGCTTC AGTAC GAAGGGG             TTTTTATTTAGCATG  81 31
GII90_RS06880 NONE
GII90_RS06885 NONE
GII90_RS06890 NONE
GII90_RS06895 NONE
GII90_RS06900 NONE
GII90_RS06905 NONE
GII90_RS06910 NONE
        xepA 1325717 .. 1325730 +  -3.8  -2.65815   CATAATAGTCTCGGC               CCTC GGAAGG GAGG                TGATCTGCATGTGAA  45 36
GII90_RS06920 NONE
GII90_RS06925 NONE
GII90_RS06930 1327223 .. 1327249 + -13.8  -5.64873   TGATCAAAGACCATA         AAAATCCCGGAG CCG CTCCGGGATTTA         TTTTTTCTTCTTCAA 100 38
GII90_RS06965 1333073 .. 1333095 +   -17  -5.80364   AATTGTGATTCTTTT           GCCTTCCGGC GCC GCCGGAGGGC           TTTTTTTATTACCAT 100 40
GII90_RS06970 NONE
GII90_RS06975 NONE
GII90_RS06980 1336454 .. 1336478 + -17.9  -4.95155   TGTCATAACCTCAAA          CCCCCTGTCCG TAA TGGACAGGGGG          TTTTTATGCTCTGAG 100 33
GII90_RS06990 1339299 .. 1339318 +  -7.2  -5.64274   TTGGTAAACAAACAT            GAATCCTT GAAA GAGGATTC             TTTTTTTATCACTGA 100 24
        dppA 1340232 .. 1340243 +  -4.4  -2.64099   CATGACTGAGCTTGC                GATG CGGA CATC                 ATTCTGCTAAAGGGG  47 4
        dppB NONE
        dppC NONE
        dppD NONE
        dppE 1344847 .. 1344874 +  -7.8  -5.61913   AGGCGATTGAGGAAA        TACTGCTTCTTT ATGC GAAGGAGCGGTA         TTTTTTCTCTTTCTT 100 44
GII90_RS07020 NONE
GII90_RS07025 NONE
        eepC NONE
GII90_RS07035 1348869 .. 1348896 +  -8.5  -2.60809   TAAGATAAATAAAAA        GAGTGGCTC CTTTTTACTA GAGCCACTC         CATTTGTTTATACTT  65 33
GII90_RS07050 1351590 .. 1351612 + -10.7  -5.77632   TTGGTGAACGTTAAA           CCCAAAACA TAAGT TGTTTTGGG           TTTTTTTGTACTTTT 100 34
        hmpA 1353034 .. 1353055 +  -8.8  -5.46657   AACACATACATGAAA           CTCTTCTC CTTTCA GAGAAGAG            TTTTTTATTGAGATA 100 40
GII90_RS07065 1354201 .. 1354221 +    -4  -6.04324   ATAACAATTAAGATG            GCTCTC TCTTGTAAT GAGAGC            TTTTTTCTTTTTTAA  93 30
GII90_RS07070 NONE
GII90_RS07075 1355458 .. 1355496 +  -6.7  -6.09196   ACGGAGGGAAAAAAG  CCCGGGAGAGTCAATCTC ATGT GAGAC-GACTGTCCGGGG   TTTTTTTGTTTTCGG 100 160
        ykkC NONE
        ykkD 1356204 .. 1356218 +  -2.9  -3.14647   ATTCTGTCATAAATT               GATTT TTATC AAATC               TTCAGTATAATGGAT  45 29
        purU 1357455 .. 1357488 + -13.3  -5.88565   GTGGTACCACGGAAA     CCCATTTCGTCCTTA TGAA TCAGGATGAAATGGG      TTTTTTTATTGTAGA 100 307
        proB NONE
        proA 1359903 .. 1359925 + -10.7  -5.24129   ATGTTCAATGAAAAA           GCTTATCTC ATTAC GAGATAAGC           TTTTTTATACGCGAA 100 48
GII90_RS07105 1360437 .. 1360465 +  -7.4  -5.52986   TGCTGAATAAATAAA        AAGAGGATGCCT GTACA AGGCATCCTCAA        TTTTTTTGATGAAGT 100 31
GII90_RS07115 1361466 .. 1361487 + -13.1  -5.21709   TAAAATAATGACCGG           CATCCTGAG GATT CTCAGGATG            TTTTTTGGTGTCGGA 100 33
GII90_RS07120 1361678 .. 1361702 +  -7.1  -4.52347   TTGGAGAAATAACAA          GGACCAGGC CGCGCAT GCCTGATCC          TTTTAATATTCTTTC  79 48
       rsbRB 1367073 .. 1367093 + -14.1  -5.31275   TCATCAATAAAAAAA            TCCGCTATC TGT GATAGCGGA            TTTTTTATGATGCGA 100 31
        ykoG NONE
        ykoH NONE
GII90_RS07175 NONE
GII90_RS07180 1374323 .. 1374340 + -14.1  -4.77036   GATGACTAATCAAAA             CCCCCGC TGCA GCGGGGG              TTTTTCATGATAAGA 100 32
GII90_RS07185 1374529 .. 1374556 + -11.4  -3.15231   ACGAGACACAAACAA        CAGAATAAGGGC TTAG GCCCTTGTTTTG         TTCCGTAATTGTGAT  84 18
        mgtE 1376406 .. 1376429 +  -8.1  -5.00196   TTATAAACGTAAAAA          GTCCGTCTC AACTGC GAGCCGGAC           TTTTATTATTTAACG  95 35
GII90_RS07200 NONE
        ykoL 1377376 .. 1377401 +  -9.2  -5.79588   AAATCATAAAAATTA         TCCTTATACA AGATAA TGTATAAGGA          TTTTTTTGCTTTTAG 100 10
GII90_RS07210 1377997 .. 1378018 +  -6.6  -5.96894   TCGTTAACTATTCTA           CACTCTCT ATTTCA GGAGAGTG            TTTTTTTGTTTCCAT 100 34
GII90_RS07220 1379762 .. 1379786 +  -2.2  -5.28481   ACCTATCAAAAAAAA         GACTGATGC CTCGGTCA GCA-CAGTC          TTTTTTGATTAAATC  73 20
GII90_RS07230 NONE
GII90_RS07235 1383530 .. 1383552 + -12.1  -5.08601   AGTTAAACACGGAAA           GAGCTGACT TCATT AGTCAGCTC           TTTTTCTTCAACTGA 100 35
GII90_RS07255 1389614 .. 1389624 +  -6.8  -3.41325   ACGTTGACAAATCAC                 TGCG CTG CGCA                 TATTATTGACGTATA  62 34
GII90_RS07260 1390664 .. 1390685 + -13.1  -5.19879   GGGCGTAATCTGAAA           GACTCTGCT TAAA AGCAGAGTC            TTTTTGTGTTTGAAG 100 33
        sigI NONE
        rsgI 1393278 .. 1393300 +  -9.8  -3.03771   TCAGTTCTTCAAAAC           GGTGACGGAG ACG CTCTGTCTCC           TGTTCGGCGATCTCC  71 486
        htpX 1394937 .. 1394958 + -13.1  -5.86976   TACAAACACATTGTT           CCTCTGAGA GAAT TCTCAGAGG            TTTTTTATTTTATCC 100 41
        ktrD 1396451 .. 1396469 + -10.3  -5.26875   ATCGGATAGGCAAAA             CACCGCA TATTT TGCGGTG             TTTTTTGATTACCAA 100 32
GII90_RS07295 NONE
GII90_RS07300 1396928 .. 1396959 + -13.8  -3.75763   AACAACAATAAAAAA      GACCTCTTAGGCGG CGTC CCGCTTAAGAGGTG       CTTTTTCTATTTTAA 100 30
        kinE NONE
         ogt NONE
GII90_RS07320 1401160 .. 1401195 +  -8.3  -5.14965   AAAGAAACAAAAAAA    CCGCT-GACTCGGCTC CAAAT GAGCAAAGTCCAGCGG    TTTTTTAATGCACCT 100 19
        mtnE 1406022 .. 1406052 +  -7.7  -5.22312   GGACGAGAAACGAAA      CCTCTTTAGAC-GC GATT GCAGTTTGAAGAGG       TTTTTTGATATGGAT  93 182
        mtnX NONE
GII90_RS07355 1408575 .. 1408588 +  -2.3  -3.05384   GAAATTGAAAACACT               CGAGC ATCA GCTGG                TTAAATAAAAGGAGG  42 4
        mtnD 1409158 .. 1409178 + -16.9  -5.28414   AATAAGCGTGAGATA            GCCCCGTTC ATC GAACGGGGC            TTTTTATATTTATTG 100 36
       spo0E 1409995 .. 1410015 +  -6.1  -5.60993   ATGCATATATAAAGA            GAGAGCTTT TCG GAAGCGCTC            TTTTTTTCTGGAAAA  91 52
GII90_RS07375 1410489 .. 1410513 + -12.1  -2.79183   TCACGAAGATAAAAA          ACCCTCCTGAC ATG GTCAGGGGGGC          TATGATGCGGATACG  84 29
        mhqR 1412669 .. 1412695 +  -5.2  -5.38348   TAATAAGTAAAAAAA         GGAAGCCT GATATGTCACA AGGCTTCC         TTTTTTGCTATTTTT  84 31
GII90_RS07405 1418345 .. 1418366 +  -5.1  -5.69068   AAAAAACTAAGGACG           AGCTGTATC CTTG GATACGGCC            TTTTTTATGTTTTTC  88 208
        queC NONE
        queD NONE
        queE NONE
        queF 1421070 .. 1421088 +  -9.6  -5.49579   ACAGAAGCAGATTAA             GGCGTACA ATT TGTACGTC             TTTTCTTTTTTATCC 100 280
GII90_RS07435 1422714 .. 1422758 +  -8.1  -3.52506   CTTGAAGAAGTCGTA TAAAAAAGTCGTTTTCCTT AAAGGAC AGGGAATTCGACTTTTTTA TATTTGAATTTGATT  72 94
        ykvP NONE
GII90_RS07445 1424904 .. 1424914 +  -5.4  -4.18018   ACGATTTGCATTAAT                 GAAC CGA GTTC                 TTTTAGCTAAACAAA  65 361
GII90_RS07455 1426556 .. 1426574 +  -7.4  -5.36441   GGAAATAGACAAAAA             CGCCGATT CAT GATCGGTG             TTTTTTATGTAAAAA  95 13
GII90_RS07465 1427236 .. 1427257 +  -9.5  -4.96762   AGCCAAGAAGCTGAA           GGTTTCTCA TACG TGAGAAGCC            TTTTTATCATATATG 100 27
GII90_RS07470 1428160 .. 1428190 +    -9  -5.58454   GTTTTTGCCGTCTAA       GCATAGAAGAGACA ATT TGTCTCAGCTGTGC       TTTTTTTCATATAAA 100 26
        ykvU NONE
        stoA 1430162 .. 1430183 + -10.2  -5.21709   ATGGACGGAAGAATA           GCTGAGAG CATAGA CTCTCAGC            TTTTTTCATATAGAG 100 25
        pfeT 1432313 .. 1432338 + -13.3  -5.03994   GACTCCTAAAATAAA         ACCAGCAGCCT AATC AGGCTGCTGGC          TTTTTATGTATCAAG 100 27
        papB 1433823 .. 1433845 +  -2.6  -5.38951   AATAGAAATAAAAAA           GGACTTTGTT CTC GACATCGTCC           TTTTTTATCTGCATT  74 39
GII90_RS07500 1435037 .. 1435048 +  -4.4  -2.67667   TGGATTACCGTCTCA                TCGA AAGA TCGA                 CTGTTTAGTGAATGC  47 6
        glcT 1436049 .. 1436065 +  -4.4  -4.17048   ATTGAGGGAAAAAAA              CGGGAA GTTCA TTCTCG              TTCTTTTGCGCACCC  61 89
        ptsG 1438327 .. 1438352 + -14.1  -3.58365   AAGGGTGTTAGTACG         CCGTGCTTGTC AGAT GACAAGTACGG          TTGTATGATATAATA 100 39
GII90_RS07515 NONE
        ptsP 1440400 .. 1440423 + -13.2  -5.53991   AGTAATGTACAAAAA          CCAGAC-GGCC TCC GGCCTGTCTGG          TTTTTTTCATAAGTA 100 36
        splA NONE
        splB 1441826 .. 1441851 +  -9.7  -5.24129   GAATATTTCACTTAA         ACGGGCTGTTG TGAT CAACAGCTCGC          TTTTTTATAAAAAAC 100 26
GII90_RS07540 1444633 .. 1444658 +    -7  -5.86976   TGTAATCCAATTACA         TCCCCAA-ACA TCATT TGTTTTGGGGA         TTTTTTATTTTATAA 100 36
GII90_RS07545 1445632 .. 1445656 +   -13  -6.04419   GGTGAAATAAAAAAA          GATTGCCTGT ACGAA ACAGGCAATC          TTTTTTTATTATTTT 100 31
GII90_RS07555 1448896 .. 1448923 +  -7.8  -4.87892   AAAAAATAAAAAACA        GGGTGCACAA-CT AAA AGATTGTGTGCCC        TTTCTTTTATTCAAA  88 32
        kinA 1450877 .. 1450896 +  -9.3  -4.02736   CCAAAAAAATAAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT  85 29
GII90_RS07575 1453551 .. 1453578 +  -9.2  -5.45802   TTGAATAAATAAAAA        CAGCCGTTGCC AGAAAGA GGC-ACGGCTG        TTTTTATTTTAAAAG 100 33
GII90_RS07600 NONE
GII90_RS07605 NONE
GII90_RS07610 1460483 .. 1460523 +  -9.1  -4.81359   TATCTGAATAAACTG  CAAAACAAGCGAACGTTAA AAC TGGTCGTTCGCTTGTTTTA  TTTTCTATTTAAATT 100 30
GII90_RS07615 1461104 .. 1461114 +    -4  -3.34522   TATTGTGAAACAAAT                 GAAT AAA ATTC                 TTAATTAACCAGTAT  50 7
GII90_RS07620 1462642 .. 1462662 +  -8.3  -5.72622   CAAGATCCGAAAAAA            CTTGGCG CTACCCC CGCCAAG            TTTTTTATTTGTCAA 100 169
GII90_RS07625 NONE
GII90_RS07630 1463397 .. 1463415 +  -4.5  -3.54741   AAGATTCCTGAAATA             GGGGGAA CAAGC TTCCGCC             TTTGCAAAAGTAATC  55 39
GII90_RS07635 1464096 .. 1464109 +  -3.1  -3.57615   GCGGTAGAGCTGAAA               GTAAG TTGT CTTGC                TTTCAGAGGTATTCA  50 110
        abbA 1464360 .. 1464379 +  -6.5   -5.4505   GGACACCCTATAATT            GATACTC CACAAA GAGTATC             TTTTTTATTGAAAGG  93 43
GII90_RS07645 NONE
        ccpC 1465955 .. 1465971 +  -8.7  -6.28967   AAAATCCATTTTAAA              GACAGCG AGG TGCTGTC              TTTTTTTTATTTATC 100 27
GII90_RS07655 1466517 .. 1466533 +  -2.2  -3.72576   GGCAGATTATATGAA              CAAGGA AAAAA TCCATG              TTTCATAAAGGGGCA  49 1
GII90_RS07660 NONE
GII90_RS07665 1467906 .. 1467928 +  -5.5  -5.94214   TCTGATCACTCACTG           GGAACTGCT AAAAC GGCTGTTCC           TTTTTTTCTTGTCTT  91 36
        dapD 1468730 .. 1468752 + -16.4   -3.7732   AAGTTTGATAAAAAA           GGCGTGGATA ATA TATCCACGCC           TTATTCGTATAGGCA 100 45
GII90_RS07675 NONE
GII90_RS07680 1470212 .. 1470246 + -13.1  -4.55908   AGCAGAATTCAGTAA     TAAAAAAACCGAAGC AAAAA GCTTCGGTTCTTTTA     TTTATTCTGTTTCTT 100 26
GII90_RS07690 1471852 .. 1471873 +  -4.4  -3.41366   CCAAGAACGAAAAGC           GGTCTAGC ATATTC GTTAGGCC            TCTCTTTTAAAATAG  53 47
        ykuV 1472378 .. 1472392 +  -5.7  -5.72622   AGTATTTCCTAAAAA               CCTGA CCTCA TCAGG               TTTTTTATTTGTGCA  88 55
         rok 1473403 .. 1473424 +  -9.5  -5.80364   AAATATAAAGAAAAA           CTGCTTG-GC ATC GCTCAAGCAG           TTTTTTTATTGAGGT 100 39
GII90_RS07710 NONE
GII90_RS07715 NONE
GII90_RS07720 NONE
        mobB NONE
GII90_RS07730 NONE
        moaD 1478696 .. 1478719 + -15.3  -5.14985   AGCGGGGGATGAAAA          CCGGACGGC ATTTCA GCCGTCCGG           TTTTTCTGTATTTCA 100 29
GII90_RS07740 NONE
GII90_RS07745 1482509 .. 1482524 +  -7.6   -4.6526   GAATAATATGAAAAG              CCTTCA ATAT TGAAGG               TTTTTGGAAATTTAT  84 35
GII90_RS07750 NONE
GII90_RS07755 NONE
        yknY NONE
        skiZ 1486326 .. 1486346 + -14.1  -5.88197   CTGCGTTATGAGTAG            CCTCATGCA ACA TGCATGAGG            TTTTTTTATGTTTAG 100 26
GII90_RS07770 NONE
        pfkB NONE
GII90_RS07780 1490199 .. 1490221 +  -9.2  -5.18726   AAAATAAGAAAAAAA           GCGTCCTT GGTTCGA AAGGACGC           TTTTTCTTATCCGGC 100 34
GII90_RS07785 1490920 .. 1490946 +  -8.7  -5.45802   CAAACAAAATAAAAA        CGCCTTGCTGGC CTAG GACAGCA-GGCG         TTTTTATTTTGAAAA 100 29
GII90_RS07795 1493027 .. 1493042 +    -9  -5.53991   ACGCCGAATAAAAAA              GCAGAG ATTT CTCTGC               TTTTTTTGATACCTA 100 30
GII90_RS07800 1493996 .. 1494013 +  -8.4  -4.99947   AGAAAAATAAAAAAA             GGAGGC GGAAAA GCCTCC              TTTTATTTACTTAAA  95 31
        abhA 1497186 .. 1497208 +  -9.9  -5.08824   AATTATGCTAAAAAA          GGCGGAG-TG ATAT CATCTCCGCC           TTTTTTGCGTGCCAA 100 41
        kinC NONE
GII90_RS07830 1499524 .. 1499535 +    -3  -2.85351   GAATATGATAAAATT                TGAT CAAT ATCA                 TGTCATATAAAGGAG  42 54
        ktrC 1500236 .. 1500252 + -10.1  -4.90906   TAGCAGCCAAATAAG              CCGTCCT CAA AGGGCGG              TTTTTCATATTATCA 100 38
         ade 1502115 .. 1502139 + -20.1  -5.42259   TCACTGCAATAAAAA          GAGGCACTCCC TTA GGGAGTGCCTC          TTTTTTTAAACCTCC 100 29
GII90_RS07855 1505192 .. 1505212 + -16.9  -4.89567   TTTAAAATAAAGAAA            CGGCTGGCA TTG TGCCAGCCG            TTTTCTCTTTTAGCG 100 31
GII90_RS07870 1506923 .. 1506941 +  -8.9  -5.47218   CTATCGTGTGAAAAA             GAGCTGA CTCGA TCAGCTC             TTTTTTTGAATGAAA 100 19
        pdhA NONE
        pdhB 1509467 .. 1509490 +  -8.2  -3.41569   AAACTGCATAATCGA          GAGGGAAGAT GAAC GTTTTCCCTC           TATTATATATCTGTT  70 43
        pdhC NONE
        lpdA 1512325 .. 1512348 + -13.2  -6.09196   TTTTCATATCAAAAA          CAGCCC-CGCT TTG AGCGAGGGCTG          TTTTTTTATTTTGAC 100 41
GII90_RS07900 1513273 .. 1513295 + -17.8  -5.84011   GAAGAGTAAAAAAAA           GCATGCGGCT TAA AGCCGCATGC           TTTTTATTTTTTATT 100 32
GII90_RS07910 1515226 .. 1515267 + -15.3  -3.85785   CGCGAAGATTAAGAT GTAAGAAAAAGAGCCGGGG GATA TCCCGGCTCTTTTTTATGC  TTGTGTTACTTTTTG 100 22
GII90_RS07920 1516346 .. 1516365 +  -5.7  -4.65895   AAGCGATAGTGAAAA            CGAACCG CATGAA TGGTTCG             TTTTTACGTGAGAAG  73 43
GII90_RS07925 1517250 .. 1517280 +  -2.5  -2.65538   ATTTGAAGAGTATCT       TCATGCTCGGAAG TAGGC CATTTGAGCAGGA       TGATCTCAGCTTGTT  41 10
GII90_RS07930 1517759 .. 1517779 + -14.1  -3.49924   CGGGTTCAATAAAAA            GCCTCTCAA ACA TTGAGAGGC            TTCTGATGATTTGAA 100 65
GII90_RS07945 NONE
GII90_RS07950 NONE
GII90_RS07955 NONE
        sigQ 1523929 .. 1523953 + -12.2  -5.15969   GCTGATATAAAAAAA         GCGCTTGTCCG ATTC CGG-CAAGCGC          TTTTTTACATTAAGC 100 31
        typA NONE
GII90_RS07980 1527356 .. 1527390 + -17.4  -3.39727   GACAGTCTGCAAAAT     CATAAAAGACTCAGCT GAA AGCTGAGTCTTTTTTG     TGTTCTGTATGGTTA 100 21
GII90_RS07995 1529797 .. 1529809 +  -7.7   -2.8978   AGATCAGGTCTCGCC                CAGCT TGC AGCTG                ATTTGCTGTAACACT  64 2
        glsA NONE
GII90_RS08010 1531730 .. 1531752 +  -4.2  -5.60993   AAATAAATGATAAAA           CTCAAACT TATTAAC AGTTTGGG           TTTTTTTATAACCGC  86 35
        ftsW 1533154 .. 1533170 +  -2.2  -2.84173   AAACAAGTGTGTACA              GGGGAA GGATA TTCCGC              TATGATAGATTATAT  41 42
         pyc 1536664 .. 1536694 + -12.8  -5.36441   AAAAGCATAAAAAAC       AAAGAGTGTATATC AAT GATATACACTCTTG       TTTTTTATATAGAAA 100 31
GII90_RS08030 1539368 .. 1539383 +  -3.3  -2.90496   ACATAGATGGCATTT              TGAGT AAAAAA ACTCA               TAATTTAAGAGAAGA  44 140
        coxB NONE
        ctaD NONE
GII90_RS08045 NONE
        ctaF NONE
        ctaG 1544345 .. 1544367 +  -9.9  -4.47271   GACGATATCATAAAA           GGTACAGCG AAATA TGCTGTACC           TTTTCGTTACATTTG  91 28
GII90_RS08065 1545387 .. 1545401 +  -3.5  -2.53015   ACAAGAGATTGTGAA               TCGCC ACGGG GGTGA               TAGATTGAAAAATAT  43 90
GII90_RS08070 1546452 .. 1546474 +  -6.9  -5.20783   GCGATGGTAATGAAA           GCCGCGGAC GAATG GTTCCCGGC           TTTTTCTATTTCCAT  90 31
GII90_RS08075 NONE
GII90_RS08080 1547334 .. 1547350 +  -2.9  -5.15634   GACAAAAGATTAAAA              GGCCC CGAAGAA GGGTC              TTTTTTCATGCGGTC  70 28
        ricF 1547895 .. 1547915 + -11.2   -4.2349   GATGTAAAGTGTCCT            GACGAGAC TGGCC GTCTCGTC            TTTTACATATAAGAG  90 24
GII90_RS08090 1548236 .. 1548255 +   -15  -2.96822   TAGCTATAAAAAAAT            CCCCGCAG GCAT CTGCGGGG             TCCTTCTATTCCTTA 100 38
        rsmD NONE
        coaD 1549585 .. 1549606 +  -5.9  -5.83226   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  93 20
GII90_RS08110 1551776 .. 1551787 +  -2.2  -2.97667   AAAGAAATAGAGAAT                TGGG AGGG CTCA                 TAATTTGCTACGTAA  42 11
GII90_RS08115 1552810 .. 1552828 + -13.2  -5.01546   AGCTGAAAGCGAAAA             GCACCTGA TTC TCAGGTGC             TTTTTCTATACATTT 100 18
GII90_RS08130 NONE
        rpmF 1555012 .. 1555046 + -14.5  -5.13344   TAAAAAGTAACTAAT    GAGAAAAGCGCAGGGT GAAA GCCCTGCGCTTTT-TC     TTTTTCTCTTCCTGT 100 27
        gerR 1555756 .. 1555781 +  -5.5  -4.40882   AACGCCTGAAATGAA         CCGGCCCTAT AGTAAGA ATA-GGCCGG         TTGTTTTGATTTCTA  70 44
GII90_RS08150 NONE
        bshC 1559040 .. 1559056 +    -8  -6.24157   TAAAGTTTTAAAGAA              CCCTGA CTAGT TCAGGG              TTTTTTTTTATGGGT 100 43
        mraZ NONE
        rsmH NONE
        ftsL NONE
GII90_RS08175 1563128 .. 1563152 +  -4.9  -5.66684   AATCCTGATTAAAAA          GAAAGCCGTCG TTA TGCAGGCTTTC          TTTTTTTATGCCTTC  88 29
GII90_RS08180 1565169 .. 1565192 +  -8.9   -3.8165   AGAAGATGAAAAGGA          GGCAG-CCGA TTGAT TCGGGCTGCC          TATTCTTTTATTGCA  78 13
GII90_RS08185 NONE
GII90_RS08190 NONE
GII90_RS08195 NONE
       spoVE 1570497 .. 1570528 + -13.2   -3.7511   TGGAAACAATTGATG      CGATAACCCTGT CCAACAAA ACAGGGTTATCG       TTATGTTATAGAGAA 100 78
        murG NONE
        murB 1572650 .. 1572675 +   -12  -4.13767   ACTGTAAGCAAACGA         CAAACGGCAT CATAGT ATGCCGTTTG          TTTTGGAATAGACAG  93 74
       divIB NONE
GII90_RS08220 NONE
GII90_RS08225 NONE
GII90_RS08230 NONE
        ftsA NONE
        ftsZ 1578014 .. 1578039 + -14.9  -5.98675   CGCGGCTAATGTAAA         GGACAAAATCG TTTT CGATTTTGTCC          TTTTTTGTTTTTCTC 100 32
GII90_RS08245 1582623 .. 1582640 +  -9.1  -5.74122   TTAAGTGGAAAAAAA             GCTGCCG TCAT TGGCAGC              TTTTTTTATATCCTC 100 37
     spoIIGA NONE
        sigE 1584549 .. 1584561 +  -5.5   -2.7641   AACCCCTTGATTTTA                CAGGG ATT TCCTG                ATTTCGACAGTTTTT  52 57
        sigG 1585441 .. 1585478 + -18.1  -3.30039   ATATTCATCAATAAT   GAAAAGCCTTTAAAACG ATGT TGTTTTAAAGGCTTTTC    TATTGATTATGGATG 100 27
GII90_RS08265 1586491 .. 1586509 +  -8.8  -5.05606   GGAAGCGGTGAAAAG             CGGAGTAC ATC GGACTCCG             TTTGTTTTTATTAAG 100 135
GII90_RS08270 NONE
GII90_RS08275 1588307 .. 1588320 +  -2.3  -5.18561   GATGTGGTAAAATAA               GTGGG AAAT TCCGC                TTTTTTAAATGTTTG  69 141
        pgeF NONE
GII90_RS08285 NONE
GII90_RS08290 1590336 .. 1590361 +    -2  -2.83103   GACGAACATCAGAGG         TGGTAAAGCGA GATGA TC-CTTTATCA         AGTTTTTTCGGTTTT  41 20
GII90_RS08295 1590636 .. 1590659 + -14.6  -3.64703   TGTGACAGTTTGATA          GGGGCTTGGC AGCA GCCAAGCCTC           TTTACATAGAAGGGA 100 41
GII90_RS08300 1591443 .. 1591457 +  -4.2  -3.55072   AGAGTTACGTTTGAA               CGACAA AAA TAGTCG               GTTTTTCAGTTTTTT  55 14
      divIVA 1592315 .. 1592344 + -12.9  -6.14618   GGTACCGCGAGATAA       GCTTTCTCGTCCC TTAT GGGATGAGAGGGC        TTTTTTTATTTTCTG 100 298
        ileS 1595159 .. 1595178 + -12.1  -5.60993   AAATAATGCAAAAGA            GCCCGGC GTAAAA GCCGGGC             TTTTTTTGTGCCAAG 100 35
        ylyA 1595647 .. 1595681 +  -8.6  -2.56728   AACGGATATCGAATA     TGGTCAGGCACTGT ATGAATA ACAGTGTCTGTCCG     GTTAATATGCCTGAT  68 4
GII90_RS08320 NONE
GII90_RS08325 1597271 .. 1597295 +  -8.6  -5.62045   CACCTTGTCCTAAAA         CCCCTCTATGC TCTG GCA-GGAGGGG          TTTTTTCTTCTATAT 100 148
        pyrR 1597963 .. 1597988 + -10.5    -5.626   GCAGGTCTTTGTATG         CCTCTTTGCGT AAAA AAGCAAAGAGG          TTTTTTTATACAGTC 100 112
GII90_RS08335 1599439 .. 1599462 + -11.8  -5.77853   CTCTATTTAACCATA          CCCCGAGTCTA TCT TAGAC-CGGGG          TTTTTTTTCAGCCTT 100 107
GII90_RS08340 NONE
GII90_RS08345 NONE
        carA NONE
        carB NONE
        pyrK NONE
GII90_RS08365 NONE
        pyrF NONE
GII90_RS08375 1609051 .. 1609066 +  -6.8  -5.84381   TGCTGTACTTGAAAA              CAGGCT GTGA GGCCTG               TTTTTTTATTAATCC  93 79
GII90_RS08380 NONE
        cysP NONE
         sat NONE
        cysC NONE
        cobA NONE
GII90_RS08405 NONE
GII90_RS08410 1615119 .. 1615142 + -15.4  -4.99043   AGAAGAAAGAAATAA          GCCAGAGCAT ACAA ATGCTCTGGC           TTTTCTTTATGCGGC 100 26
GII90_RS08420 1619686 .. 1619708 +  -8.5  -4.77165   ATGATATAATCTTAG           GGGTAATAG CGTGT CTATTGCCC           TTTTATTATGAGAAC  95 47
GII90_RS08425 1620665 .. 1620676 +    -3  -4.07568   CTTACTAGGCTAAAC                TAGA GACG TCTA                 TTTTACAGGGGGAAC  55 68
        remA NONE
GII90_RS08435 1621583 .. 1621594 +    -3  -3.09878   AGAAAATGCTGGAGG                TTGA ATAA TCAA                 TGTTAGATCCGTCAA  43 18
GII90_RS08440 1621807 .. 1621833 +  -9.6  -5.47218   GAATAGTAGCACAAG         TAGCAACCTATA TCA TGTAGGTTGTTA         TTTTTTTCCGTGCGG 100 35
       coaBC NONE
        priA NONE
GII90_RS08455 NONE
GII90_RS08460 NONE
        rsmB NONE
        rlmN NONE
        prpC NONE
        prkC 1632129 .. 1632144 +  -3.2  -2.77013   AACAAGGAGGGAAAA              TATGCC TGAG GGCAAA               ATTATTAAGGCGCTA  44 39
        rsgA NONE
GII90_RS08490 1633699 .. 1633725 +  -3.1  -4.84527   AGCAGCTTTAGAAAA        GAGC-TGGGCATA CAA TA-GCCTAAGCTC        TTTTTCCTGTATGCA  67 40
GII90_RS08495 NONE
GII90_RS08500 1634592 .. 1634616 + -12.8  -3.85542   TTCACCACATAAAAA          CGCCTGCCAC ATATC GGGGCAGGCG          TTCATTTTGTTATAC  95 64
GII90_RS08510 NONE
GII90_RS08515 1637125 .. 1637153 + -19.1  -3.68394   TATATAGTTTCAGCA        GAATAGAAGGGCA ATT TGCCCTTCTATTC        TTATGTCTGCTTTTA 100 20
       sdaAB NONE
       sdaAA NONE
        recG NONE
        fapR NONE
        plsX NONE
        fabD NONE
        fabG NONE
        acpP 1644627 .. 1644638 +  -7.2  -4.25458   TCCCGCCGAAACGCG                GGGC TTTA GCCC                 TTTATTCGTGCAGTT  75 55
        rncS 1645489 .. 1645510 +  -8.7  -3.75535   TACGAAACAATAAAA           TCCCCCTTA TGAC TCAGGGGGA            TTTCAGTATGTATGC  78 28
         smc NONE
        ftsY 1650148 .. 1650197 + -14.5  -3.83844   TTAGTGGAAAAAGCC GACGATTAAGAAAAAGGCCCCAA CATC TTGGGGCCTTTTTCTTTTTTATC TTCTTACTTGATAGG 100 17
GII90_RS08580 NONE
GII90_RS08585 1652543 .. 1652563 +    -4  -3.61398   TACCTTTTATGTAAT            CGGTTATA CATGA TAAAACCG            TTGTTAAGAAAAAAC  52 27
        rpsP NONE
GII90_RS08595 1653168 .. 1653188 +  -3.9  -5.40072   ATATTTGACTAAAAG            GGAGAGG GCCGGCA CCTCCCC            TTTTTTTACACGCAA  78 29
GII90_RS08600 1653660 .. 1653672 +  -5.5  -2.62184   AAAAGTAATTGAAAT                TCGCC AGA GGTGA                TCATATGACAAAGCG  51 13
        rimM NONE
        trmD 1655016 .. 1655026 +  -2.4  -3.49419   CTTGAAAACGATGTT                 CCGC TGT GCCG                 GTTTTTGTGGCCAAG  47 112
        rplS 1655433 .. 1655456 + -12.6  -5.60993   GATAACGAACGAAAA          GAGCTTGTTA CCTG TAACAAGCTC           TTTTTTTATACAGAA 100 42
        ylqF 1656405 .. 1656432 +  -9.2   -5.4833   GAACAGCCGACGATG        TAAAGGCGCGCA GAAA TGCGGGTCTTTA         TTTTTTCTTGGCTGA 100 23
        rnhB NONE
GII90_RS08630 NONE
GII90_RS08635 NONE
        sucC NONE
        sucD 1661554 .. 1661576 + -11.3  -3.31915   CGCATTAATAAAAAA           GGGACAGCC GTCAA GGCTGTTCC           TGCTTTTTCTAACAA  82 33
        dprA 1662503 .. 1662521 +  -6.8  -3.57908   GGAACCCTTTTGAAT             TATCGTTT GAC AAACGGTA             TTGTAATATTTAATA  64 28
        topA 1664765 .. 1664786 + -10.9  -4.21954   AACCACAGAAGTAGC           GGTGAGCAG GGTC TTGCTCACC            TTCTTTGTGTGTTAA  90 27
       trmFO 1666193 .. 1666205 +  -5.5  -3.04144   TACCATTTAAAAGCC                CTTCC TGG GGAGG                TATTAGGCATGGAGA  53 72
        xerC 1667126 .. 1667141 +  -6.2  -3.02856   GCATTTAAGAAAAAT              TAAAGG AGGC CCTTTA               TGTCATCTTTTCATG  56 23
        clpQ NONE
        hslU NONE
        codY 1669935 .. 1669953 +  -9.6  -5.95539   CATTAATCACAAAAA             GAACCCTT TTT GAGGGTTC             TTTTTTTATTTCAAA 100 35
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 1676661 .. 1676675 +  -2.8  -2.62184   TTTATGATTCAAGGC               CATTAG GAG CGAATG               TAATGTCCGGCAAAA  41 20
GII90_RS08725 NONE
GII90_RS08730 NONE
        flgD NONE
        flgG 1680009 .. 1680036 +  -9.8   -3.8823   TAAACGTTAAGGAGG        GAGGGGAGGCGA GTAA TCGCTTCTCCGC         TGTTTTATGATTAAA  85 31
        swrD NONE
        fliL NONE
        fliM NONE
        fliY 1682859 .. 1682871 +  -2.7  -2.56864   AAGGAGAGAGATAGA                TTATG GCA CATAG                AATTTTAATTGTAGA  41 49
        cheY NONE
        fliZ NONE
        fliP 1684536 .. 1684548 +  -4.1  -3.08522   ATTTAATTGTGAAAT                CTTTG CTT CAGAG                CTTTTAGGGTAGGTG  47 6
        fliQ NONE
        fliR NONE
        flhB 1686705 .. 1686717 +  -2.7  -3.53012   AAAACAAAAAGTATA                TTGAA TTT TTCGA                TTTAAAAGGAGAGAA  48 22
        flhA NONE
        flhF NONE
GII90_RS08805 NONE
        cheB 1691834 .. 1691855 +  -4.5  -2.67058   AAAAAAGAGAGGGTG           TGATTCAAA TGGA TATGAATCA            GTATTTAGATGTCTT  47 23
GII90_RS08815 NONE
GII90_RS08820 NONE
GII90_RS08825 1694980 .. 1695013 +  -3.9  -3.48378   GAAAAGCTCTTTGTC     GCCTTAGGTGCA-TCA TTA TGAGTACAACTGAGGC     TGTTGTTATAAAGGT  52 5
GII90_RS08830 NONE
        sigD NONE
        swrB 1696889 .. 1696901 +  -4.8  -3.48593   TTTATGCAGAGGGTG                CTGC AGGCG GCAG                TTCTGTACAAAAATG  57 98
        rpsB 1697712 .. 1697740 + -12.6  -5.00616   GTAACCTATTCAAAA        GGTGATAAGAGG GACTG CCTTTTATCACC        TTTTTTCAAGAAAAA 100 37
GII90_RS08850 1698728 .. 1698752 + -13.7  -4.61633   TCTTTTCAGGCAGTA          TAGGGGACACA TTT TGTGTTCCCTA          TTTTTAAAACTATAT 100 70
GII90_RS08855 NONE
GII90_RS08860 1700138 .. 1700174 +  -2.4  -3.29038   TACAATAGATAATAG    TGAAAAGACCCTCT CATGTTTAC AGGGGGTTTTTTTG    TTAATACTGTTGATT  43 53
GII90_RS08865 NONE
GII90_RS08870 1701825 .. 1701841 +  -6.7  -2.87026   TACTTTCTGCTTGCC              CTTTTTT CAT AAAAAAG              TCTAATATGAATATG  58 14
         dxr NONE
        rseP NONE
        proS 1706100 .. 1706122 + -12.1  -3.26188   ATAGAAATAATAGAA           GGTACCTCA TTGCC TGAGGTACC           TTCACTTATGATGTT  87 74
GII90_RS08890 1710482 .. 1710504 + -13.6    -3.524   GTTCTAATATGGAAA           GCAGAATTTC TCA GAAATTCTGC           TTCTATGCATACATA 100 34
        rimP NONE
        nusA NONE
        rulR NONE
GII90_RS08910 NONE
        infB NONE
GII90_RS08920 NONE
        rbfA 1715839 .. 1715865 + -10.9  -4.42976   CTGAATAAAAAAAGA         GAGGATAGGCG TATAT CGTCTGTCCTC         TTTCTTCGTTTATAA  95 33
        truB NONE
        ribF 1717790 .. 1717808 +    -6  -2.52464   GGAAGCCATCCGTTA             TTTCAGCA ATT TGCGGAAA             TAACTTGCAACGCAC  54 4
        rpsO 1718247 .. 1718262 + -10.4  -5.36965   CGATAATCGTAAAAA              GCGGGA GGAT TCCCGC               TTTTTTATCGTATTA 100 35
         pnp 1720542 .. 1720563 +  -8.7  -4.66535   AATGAAAACATAAAA           GGAGCCTGGG AGA CCC-GGCTTC           TTTATTTTGAAGCTT  90 40
GII90_RS08950 1721612 .. 1721622 +  -3.2  -3.64703   GAAGTAACAGATGAA                 GGCA GCT TGTC                 TTTGAATAGGAGGAA  52 34
GII90_RS08955 1722880 .. 1722904 +  -9.9  -5.19261   CGTCTTAAAAAGGAA          AGCCTGCCCCA TAA TGGAGCAGGCA          TTTTTTAATCCCTTT 100 33
GII90_RS08960 1723254 .. 1723274 + -11.2  -5.71712   AGAAAACATCTGAAA            CATCGGCT GCCGG AGCCGATG            TTTTTTTATATGGAA 100 72
        dpaA NONE
        dpaB NONE
         asd 1726084 .. 1726117 +  -8.3  -3.08996   TTCTAAAGACGAATA     GAAGAGAGTAAGGC GCTATCA GCC-TGCTCTCTTC     TGTTACGTCCGAATA  67 52
GII90_RS08980 NONE
        dapA 1728293 .. 1728324 +  -4.4  -4.71418   ACAGTGAAACAAACG      CGGTCATTCTCA CATTCAGC TGAGTTTGACCG       TTTCTTTTACATATT  68 52
GII90_RS08990 1730120 .. 1730146 + -18.2  -5.37345   AGTATAATGACTGAC         TAAAGACCGGAG CTG CTCCGGTCTTTA         TTTTTTGTCCTTCAA 100 34
        tepA NONE
        tepJ 1731234 .. 1731252 +  -7.4  -4.38203   TCCTACAGAAAAAAC             GCAGCC TGTAAAC GGCTGC             TTTCTTCATTATGTA  79 86
     spoIIIE 1733650 .. 1733682 +  -4.8  -4.15657   TCAAAAGAGAAATAT      GATGAGCTCTCTTC TTAAT GAAGGGAGTTCCGC      TTTCTATAGTTGTCA  63 8
GII90_RS09010 1734540 .. 1734559 +  -3.5  -5.95539   AAACGATTCTAAAAA            CGGACGC CTGTAT GTGTCTG             TTTTTTTATTTGCAC  88 29
        bcbE 1735874 .. 1735892 +  -5.3  -5.49809   AGAAAAAAACTTAGG            GACGGTCT AGCC AG-CCGTC             TTTTTTTGCGCTTTC  88 16
GII90_RS09020 NONE
GII90_RS09025 1738633 .. 1738654 +    -8  -4.82901   AAATCATAAACAAAA           CATCCCTC CAGTGT GAGGGGTG            TTTTTCTGCGGAAAG  88 32
        efpI 1739411 .. 1739424 +  -6.7  -3.13164   GCTGGCACTGCTGAT               CCGAA AATA TTCGG                TGTATAGTTTCTTTT  61 27
GII90_RS09035 1739753 .. 1739770 +  -7.7  -5.63645   CACTCACTAGGAAGA             GAGGGGA TTTT TCCTCTC              TTTTTTATGTTTTCC 100 31
GII90_RS09040 1740651 .. 1740661 +    -4  -4.66833   GATCAATCCGGGTTT                 TCAA GCT TTGA                 TTTTTAAAATTGGAA  66 8
        rodZ 1741592 .. 1741613 +  -4.5  -4.65916   TAAAAAGGAAGAAAA           GTCATCT TAATTACC AGATGAC            TTTTCTTCACGTCCG  68 16
        pgsA NONE
GII90_RS09055 1743587 .. 1743600 +  -3.1  -3.86307   CGCCAAGAAAAAATC               CGAAT ATGC GTTCG                CTTTTTTCTTGGCAA  55 112
        recA 1744750 .. 1744768 +  -8.9  -5.63645   CAAATGATACAAAAG             GCTGAGT GAAAA ACTCAGC             TTTTTTGTATTTTGC 100 56
GII90_RS09065 1746161 .. 1746177 +  -4.5  -2.80715   GTATTTCCGACACAT              TTACAAT GAA GTTGTAA              CATTTGTTTTTTTAA  48 124
         rny 1747898 .. 1747924 + -12.5  -5.40072   GTAGAGTATGCAAAA         TAAAGTGATGC GCTAA GCATCACTTTA         TTTTTTTGACGGCAA 100 23
        ymdB 1748909 .. 1748930 +  -5.9  -2.66711   AGCAACATCTAATAA           TGATTGTTC TAAT GAACACTCA            CTTATCCATTGTAAA  54 171
       spoVS 1749242 .. 1749270 + -16.9  -5.10877   CAAATAAAGCATTCT        CAACCTGTTTGCG TAA TGCAAACAGGTTG        TTTTTCATTTATTGT 100 44
         tdh NONE
GII90_RS09090 1751727 .. 1751748 + -13.1  -4.52101   CAGCTATTGTAACAA           GAGGAAGAG TTTA CTCTTCCTC            TTTTGATTCCTTATT 100 29
        miaB NONE
        ricA 1753835 .. 1753857 +  -9.9  -5.75599   GCTGTTCTCTCTAAA          CACGGTGCCT TTAC AGGC-CCGTG           TTTTTTTATCATTTG 100 27
        cotE 1754645 .. 1754675 +  -6.1  -5.49569   CTGAAGAATAAAAAA       GGGACTAGGGG AGACAGTAC CCCCAAGTCTC       TTTTTTATATTGATA  91 30
        mutS NONE
        mutL 1759261 .. 1759291 +   -20  -5.67967   TAGCGGGGGTGGTAG       GCATTGATCCATTC TCT GAATGGATCAATGC       TTTTTTTGTACTCCT 100 38
GII90_RS09130 1761568 .. 1761602 + -10.9  -5.79595   GCACTAGTGTGAAAA    GCGATTCTTGTTGGGC ATGC GTCCAA-AAGAGTCGC     TTTTTTATTTTCAAA 100 42
GII90_RS09135 NONE
GII90_RS09140 NONE
        fabD 1763664 .. 1763677 +  -2.3  -3.02947   CCCCGCTAAAGCATT               TGCCC CTAT GGCCA                TGTATCTCATCAATC  42 32
GII90_RS09150 NONE
        fabD NONE
GII90_RS09160 NONE
        pksF NONE
GII90_RS09170 NONE
GII90_RS09175 NONE
GII90_RS09180 NONE
        pksJ NONE
        pksL 1800544 .. 1800555 +    -3  -3.59979   GGCTTCTAAAGATAT                GTTT TGGA AAAC                 TTTCAAATAAGAGAG  48 4
        pksM NONE
GII90_RS09200 NONE
GII90_RS09205 1837561 .. 1837584 + -12.4  -4.32951   CTGAGAAAACACAAA          CGCCCCCTCT TTTA AAAGGGGGCG           TTTTGAATGTTATTT  93 37
GII90_RS09230 NONE
GII90_RS09235 1843712 .. 1843736 +  -9.3  -5.47159   GGAGAATAAAGAAAA          CAGACGGTC ACTCACA GGCCGTCTG          TTTTTTATCTTCAGC 100 32
GII90_RS09255 1845351 .. 1845368 +  -2.7  -3.11768   AAAAAAAGGGCAAAA             TGGATAG GTGG TTGTCCA              TGTTGAATGCTATAA  45 59
        miaA NONE
         hfq 1846655 .. 1846678 + -13.8  -3.37188   CAAGACATGAGGAAA          GGCTGTCGGG GGTT CCCGGCGGCC           ATTTTTAACATGAAT 100 58
GII90_RS09270 NONE
GII90_RS09275 1847451 .. 1847482 + -12.4  -4.13963   TAAAAACGACACCCC      GAGTAGGACGAGAG ATGA TTCTCGTTCTGCTC       TCTTTTTTGGGCCCT  93 74
        nrdI NONE
        nrdE NONE
        nrdF 1851095 .. 1851115 + -12.7  -4.19238   TTTGAAGATGAAAAA            GAGCAGATA TAA TATCTGCTC            TTTTCGGCTTGAAGG  95 14
GII90_RS09295 1851782 .. 1851808 +   -13  -5.60993   TCTTGAATAAAAAAA         CCCGGTTTCTCG CGA TGAGGAGCCGGG         TTTTTTTATGAGACG 100 31
       spoVK 1854197 .. 1854223 + -12.4   -5.2112   GCATCTGGATCTGCA         TAGACCTCTCAG TTT TTGAGAGGTCTG         TTTTTTGCTCGTATT 100 23
        hflX NONE
GII90_RS09315 1856879 .. 1856889 +  -2.6  -4.11295   AGCAATTAATTTAAA                 TTTT TTA AAAA                 TTTCTCTGGATTTGA  55 27
        glnR 1857402 .. 1857414 +  -3.4  -2.98356   TTCATTAATCCGTTA                GCAA CTGTT TTGC                TATATACATTTACCT  45 33
        glnA 1858796 .. 1858822 + -13.8  -5.49569   GTATTAATATCTCAA         TCCCTTGGCACT AAA AGTGTCAGGGGA         TTTTTTATGTTAATA 100 34
GII90_RS09330 1859572 .. 1859602 +  -3.4  -2.78679   TGAAACATTTGCTGA      GG-CATTTCGTGA AGCTGA TCACCAAATGACC       ATTTCCATAGAGGCA  44 192
GII90_RS09335 1860046 .. 1860056 +    -4  -4.82855   ATAGTCATATTTCCC                 GTAA GTA TTAC                 TTTTTGGATTTAATA  69 76
GII90_RS09340 1860505 .. 1860524 +  -2.2  -2.83112   TGACACTAGATGGTA            TTAAGAAA GCAG TTTCTAAA             TATGGTACATTCCCT  41 153
GII90_RS09345 NONE
GII90_RS09350 1861876 .. 1861910 + -18.9  -4.08689   CAATCTTGTTGGTAA     CAAACATCCTCTTAC TTATT GTAAGAGGATGTTTG     TTTAATTCTTACATA 100 42
GII90_RS09355 NONE
GII90_RS09365 NONE
GII90_RS09370 1864387 .. 1864397 +    -4  -3.02144   GAACGGAGACTTGCT                 TTCA ATA TGAA                 TGTTAAAAAAGCTGC  47 63
GII90_RS09375 1864676 .. 1864690 +  -2.1  -2.63041   GAGTTTAAAATCCAT               TAGGC ATTAC GCTTA               TACATTGGTATTTTC  40 33
GII90_RS09380 NONE
GII90_RS09385 1865545 .. 1865563 +  -3.9  -3.48914   TATTGAATAAATTAA             TACGGAA TTAAT TTCTGTA             TTCCCTTTTGTTTCC  52 15
GII90_RS09390 1867747 .. 1867758 +    -3  -3.57561   CAAAGTTTATTTGGA                TCAT ATTG ATGA                 TTTCAAGGCTTAAAA  48 1
GII90_RS09395 1869869 .. 1869887 +  -4.6  -4.25848   GATAGGACAGTTTTT             TCTCTTTG GTC TGAAGAGA             TTTTAATAAAGCCTT  64 491
        xylA NONE
        xylB 1874223 .. 1874249 +    -3  -5.66229   TGTTAACACACAAAT        AACCCCT-CAC ATTGAC GTGAAGGGGTG         TTTTTTATTGTTACT  81 325
GII90_RS09425 1876927 .. 1876943 + -10.9  -4.41895   TCAGAAAAAACAAAA              TCCCTCT GGT AGAGGGA              TTTTGATTCAGCATT  95 85
GII90_RS09435 NONE
GII90_RS09440 1880010 .. 1880025 +    -4  -3.28145   CCACTAATAATAAGC              CAAGTT AAAT GACTTG               TGTTCATTAATAATT  48 493
GII90_RS09450 1881157 .. 1881186 +  -5.9  -3.16944   AATAAGATCCTCACT       TTATCTGCAAGTGC TTA GTATTTGC-GATAA       TATTGCATTCGTAAT  58 209
GII90_RS09455 1882195 .. 1882214 +    -8   -5.4505   ATAATACATAAAAAA            GATTAACT CTAC AGTTAATC             TTTTTTATTCAGAAG 100 134
GII90_RS09485 NONE
GII90_RS09490 1885280 .. 1885295 +  -7.6  -5.64873   GAAAAAAACAAAAAA              GAGAGA TACC TCTCTC               TTTTTTATTCTTCGA 100 70
GII90_RS09500 1886299 .. 1886321 + -13.6   -5.4505   TTGATTTCTTTAAAA           GCATGATGAA ATG TTCATCATGC           TTTTTTATTGAGAAA 100 95
GII90_RS09505 NONE
GII90_RS09510 NONE
GII90_RS09515 1890424 .. 1890444 +  -4.8  -5.33866   ATGAATCCCAAGGAA           GAGAAG-GA AACC TCTCTTCTC            TTTTTTATGCATTTA  84 40
GII90_RS09520 NONE
GII90_RS09525 NONE
GII90_RS09530 NONE
GII90_RS09535 1894028 .. 1894051 +  -6.6  -5.58522   AGAGAAAATAAAAAG          TGCACAGGCC AAAG GGCAGGTGCA           TTTTTGTTTTGTATG  93 30
        pghL 1895012 .. 1895036 +  -7.2  -3.51091   ATAGCTACTGAAAAA          TAGGAGGC GATAAGACA GCCTCCTA          TTCCTTATGCTTCTC  67 30
        fosB 1896609 .. 1896640 +  -9.5  -4.45485   CTTTTTTTGAACAAC      AAACCCCCTC-TCC GTAAA GGAAGAGGGGGTTA      TTTTATGCATCTGAT  91 509
        yneA NONE
GII90_RS09565 NONE
GII90_RS09570 1898726 .. 1898752 + -11.7   -4.2535   ACTTCACTAATATAA         GAGGAATACGG CAATA TCGTATTCCTC         TTTTGCATATACTAT  91 31
         tkt 1900903 .. 1900924 +  -8.8  -5.42164   AGTAAGCTTTTGAAA           GAGGATGA GTCAAA TCATCCTC            TTTTTCTTGTTTATC 100 36
        sirA NONE
GII90_RS09585 1901835 .. 1901860 +  -9.2  -4.17023   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCATTCA  85 65
        ccdA NONE
GII90_RS09600 NONE
GII90_RS09605 1903995 .. 1904016 +  -8.8  -5.63517   AAATGAATTAAAAAA           CCTTTCCT CTTGTC AGGAAAGG            TTTTTTATTTGAGAA 100 30
        acnA 1908449 .. 1908475 + -11.7  -4.83169   CTGATGAATCAATAG         GAAGAGAAGGC ATTTC GCTTTCTCTTC         TTTTTATGACACAAT 100 37
GII90_RS09635 1909007 .. 1909027 +  -6.2   -5.9873   GAAATGGAACAAAAA            CTGGATCT TGATT AGATTCAG            TTTTTTTTATACTCA 100 11
GII90_RS09640 NONE
        sspN NONE
GII90_RS09650 1909731 .. 1909744 +  -8.1  -6.02919   ACCGTTCTTAAAAAA               CCAGG GAAA CCTGG                TTTTTTTCTTTCTGA 100 30
GII90_RS09655 NONE
GII90_RS09660 1910548 .. 1910568 + -11.2  -5.54885   TCATTTGTAAAAAAA            GAACGCAC ATGAA GTGCGTTC            TTTTTTATTGGTATT 100 31
GII90_RS09675 1912117 .. 1912148 + -14.7   -5.0925   AATAGGTGCAGAACT      GCAAAAATCCTTG TAAATT CAAGGATTTTTGC       TTTTTAATTTTAAGA 100 36
        parE NONE
        parC 1916897 .. 1916935 +  -8.5  -5.28826   CATACAGAACAATAA  TAAA--AAACCCGCTCATA CTA TATGAGCGGGTTTCGTTTG  TTTTTTATCAGCTTT 100 26
GII90_RS09695 1919368 .. 1919392 + -15.9  -4.99435   TAAATATAAAACAAA          GCTGCATTCAA TAG TTGAATGCAGC          TTTTTCATTATTGGA 100 43
        eglS 1921169 .. 1921190 + -10.2  -4.95758   TAAGCTTTTTTTTGG           CGGACATC AGTAAC GATGTCCG            TTTTTATCATCTAAT 100 42
GII90_RS09705 1921510 .. 1921554 +  -5.2  -4.93079   GCAGTAAAATTTCAA TTTCTGTCTCACTAACTTAAG TATA CTTT-GATATTGAGACAGAAA TTTATTTATTTTGTT  76 52
GII90_RS09720 NONE
        galU NONE
GII90_RS09730 1927301 .. 1927335 +   -13  -5.63103   ACGATAGCTAGCGGA     TATGCATAGGGGTG ACTGACG CTCCCCTATGCATA     TTTTTTTACTTGCGA 100 34
        iseA 1982217 .. 1982235 + -10.2  -5.74086   GTTATATAAGAAAAA             CGCCCGGT ATA AGCGGGCG             TTTTTTATTTGGTTT 100 32
         ggt 1985477 .. 1985501 +  -7.9  -5.14965   TAAATAAATAAAAAA          CTGTACTCGCT TCA AATGAGTACAG          TTTTTTCATGCAGAT  93 34
GII90_RS09865 1987549 .. 1987576 +   -15  -3.35616   AATGGAATAAAAAAA        GAAACCGG-CTGG CAG CCAGACCGGTTTC        TCTTATATGATAATC 100 31
        gltC 1994720 .. 1994746 + -11.7  -5.61596   AATAAAAAAAATGAA        CCCGA-GCTTCT ATAT AGAAGCTTCGGG         TTTTTTTCTGCAAAT 100 36
GII90_RS09905 1998762 .. 1998804 +  -3.4  -4.56775   GCAGATAAGGATGAA TGAGATCCCGTTGTTACGAT CAG AATGGACAAATGGGATCTCA TTTTTCGAGGAGGCT  64 33
GII90_RS09910 NONE
GII90_RS09915 2000161 .. 2000186 + -11.3  -2.87931   TACTCTATTGTGAAA         CCAAGAGAATG ACGG TATTCTCTTGG          TCTGTGCCACATCCC  79 14
GII90_RS09935 NONE
GII90_RS09940 2006840 .. 2006872 + -14.2  -3.45231   GAATAAAACAAATCT      GAGGAGAGCGAGAT TCATT GTCACGCTCTCCTC      TGTTTAGCTGTATGG 100 35
GII90_RS09955 NONE
GII90_RS09960 2008665 .. 2008678 +  -6.7  -4.03586   GAAGTAAGCTGTTGA               GTTGC TGCT GCAAC                TTCTTGTATTTGAGA  70 349
        hpaB 2011924 .. 2011943 +  -7.1  -4.20024   AGAACATTGAAAAAA            CAGCGGG AAAAGA TCCGCTG             TTTCGTATTTTTTAT  75 31
GII90_RS09985 2014818 .. 2014846 + -13.1  -4.95155   GCTACTGATATAAAA        GAGGCCCTGCGTT AAA AACGCTGTGCCTC        TTTTTATACTATAGG 100 33
GII90_RS09990 2016102 .. 2016115 +  -3.1  -4.99645   TCTTTCATCTTACAT               GAAGG TCTT CTTTC                TTTTGTTTATCCAGT  70 377
GII90_RS10020 2020066 .. 2020078 +  -4.1  -3.86311   TTTTTAATGATGAAA                CAGGT TGC ACTTG                TTTAGGTTTCACTGT  57 34
GII90_RS10040 NONE
GII90_RS10045 NONE
GII90_RS10050 2024023 .. 2024033 +  -8.2  -3.68738   TTTGACAAACTCATG                 CGCC GCC GGCG                 TTATCTCTTCAAATG  69 188
GII90_RS10060 2025940 .. 2025965 + -11.3  -3.08966   TAAACAATGAAAAAA         GCTAATGTCTG CATG TAGACATTAGC          TTGGCTGGCGTTTAG  79 130
         bla 2028533 .. 2028554 +  -9.5  -4.00042   CTTTTTTAACTTCTA           CCGTTCATT TTTT GATGAACGG            TTCTTTCATAAGACC  83 77
GII90_RS10095 2029990 .. 2030005 +    -9  -5.25799   GTTTAAACTTATAAA              GGAGCT TTTT AGCTCC               TTTTTCTCTTGTTTT 100 35
GII90_RS10115 2035649 .. 2035662 +  -8.1  -4.18018   ACAACAATTAAAAAA               GCCCT CATA AGGGC                TTTTGCATAAAACAA  79 30
GII90_RS10125 2036618 .. 2036633 + -11.8  -3.06862   ATTAAGCAGATCCAA              GCCCCC ATAT GGGGGC               GTTCTTATTATTGTA  83 36
GII90_RS10130 2037513 .. 2037555 + -11.6  -5.07523   CCATATCGCTTTATA TACCACCTCCT-CTTAG CTAATATGTT CTAAGTAGGAGGTGGTA TTTTGTTTGTATCTC 100 50
GII90_RS10145 2039255 .. 2039267 +  -4.9  -4.06281   CCATCCTTATATGTT                TAGTT AAA AACTA                TCTTTTATTTAGACT  63 19
GII90_RS10155 2040114 .. 2040130 +    -8   -4.7657   TGTTTAAACTTATAG              GGAGCT TTTTT AGCTCC              TTTTTCACCTTTTTA  88 34
GII90_RS10160 2041030 .. 2041055 +  -9.8  -5.88061   CCGAGATAAACCCCA         TACCCTTCTC TTGATT GAGGAGGGTA          TTTTTTTCGTTTTTT 100 32
        rapK NONE
GII90_RS10170 2042435 .. 2042459 +  -9.4  -5.22137   TGATTAATTAATTTA         GCCCTACTCAA ACAT TTGAGT-GGGC          TTTTATTTTATGATT 100 48
GII90_RS10185 2044482 .. 2044512 +  -2.6  -4.65168   ATTCACACGTAATCT       CTCTCTATCTTCTT TAA AAGAGGATATGTAG       TTTTTAGACTCTAAT  65 102
GII90_RS10200 2049078 .. 2049105 +  -9.2  -5.86976   GCAACTTTTTGTACA        GAGCCGGGGTGTT GGT AGCACCTCGG-TC        TTTTTTATTTTATGC 100 100
GII90_RS10225 NONE
GII90_RS10230 2058072 .. 2058084 +  -4.9  -2.80398   AAATTCATTTCACCG                TTACT AAA AGTAA                TCCTTGCATTCCTTC  50 443
GII90_RS10270 2063770 .. 2063809 +  -2.2  -4.68994   TACAATAAAGAAAAA  GACATCCTTGC-CCGCT AACAGCG AGTTAAGCAAGGATGTC  TTTTTCAATCATGCT  61 8
GII90_RS10280 2065025 .. 2065060 + -13.5  -3.36515   AGTCTATCAATTTAC    TGACAAAAGCCCAAA AATGAA TTTGGGCTTTTGCCA     TGTTTACACGTAAAA  95 42
GII90_RS10295 2067257 .. 2067269 +  -3.4  -3.15758   CAAGATATGCTGTAA                TGGT ATAAA ACCA                TTGATGGAGGGTTCT  47 61
GII90_RS10300 2068266 .. 2068287 + -10.3   -5.0133   GATAAACATTAATCA           GCTTGTAAA TTTT TTTACAAGC            TTTTTTAGCGCAATC 100 29
GII90_RS10305 2069490 .. 2069519 +  -9.4  -5.29445   ATGCCTGATGATAAA       GGAGGTCTTCTA ATATAC TAGAAGGCTTCC        TTTTTATTGTTGGAG 100 33
        desK NONE
        desR 2071337 .. 2071360 + -13.2  -5.08601   GGTTTAAATAAAAAA          GGATCTTGGC ATCT GCCAGGATCC           TTTTTGTTAACCTGA 100 30
GII90_RS10350 2077649 .. 2077665 +  -5.1  -3.67296   ACAATATCCATGCTC              GGAAATG AAG CATCTCC              TTTCCCTCGCTGATC  57 316
GII90_RS10360 NONE
GII90_RS10365 2078390 .. 2078419 + -13.7  -5.03994   AACAGTGTGGTGTAA       TAAGAACAGGGCG CACA TGCCCTGTTCTTG        TTTTTATATATAAAA 100 26
        dhaS 2081114 .. 2081130 +    -8  -6.04953   TGTATGTTTAAAAAA              CTGCTG CCTGC CAGCAG              TTTTTTTCTTTCTGT 100 43
        sqhC NONE
GII90_RS10390 2083936 .. 2083954 +  -8.8  -3.37493   GCTCTATTAAAAAAA             GCCCCC TTTCCTC GGGGGC             TTCGTGTGTTAAAAA  73 31
GII90_RS10400 2086499 .. 2086526 + -14.3  -5.59534   AATATGCATCAAAAA        GGGTACATCAC TTTATC GTGATGTACCC         TTTTTTATTATCCTT 100 40
GII90_RS10445 NONE
       rsbRC 2100638 .. 2100662 + -13.7  -4.90869   CTTAAAATTAAAAAA          GGTATAAGGCT TAA GGCCTTATACC          TTTTTGATTAATCAT 100 19
        gerT 2103528 .. 2103550 + -14.9   -5.5112   TCATCCGATAAAAAA           CGGCCTGCA ATCGA TGCAGGCCG           TTTTTTATTAATAGA 100 30
GII90_RS10490 2105995 .. 2106019 + -12.9   -5.1675   CCACAAAAAAAAGAA          GAGAGAGCTCC AAA GAAGCTCTCTC          TTTTTTCATAAATGC 100 53
GII90_RS10500 2107463 .. 2107487 + -14.4    -5.626   TAAGGATATGAAAAA          CCTTAGTCCG AAATC CGGACTAAGG          TTTTTTTATACAATC 100 38
GII90_RS10515 NONE
GII90_RS10520 2110902 .. 2110924 + -17.8  -5.89947   GGGCGCATAAAAAAA           CCATACGCGG CAG CCGCGTATGG           TTTTTTTTACATTTC 100 31
GII90_RS10530 NONE
GII90_RS10535 2113562 .. 2113586 + -12.2  -4.69549   ACCAGACACAATGAA          GCCCGCTTAT CTAGT GTAAGCGGGC          TTTTCATTTTAAATT 100 63
GII90_RS10550 2115535 .. 2115560 + -16.3  -4.53636   AGCCTTAAAACTGCA         GAAAACTGCGG GTTT CCGCAGTTTTC          TTTTCATTATGTCGT 100 33
GII90_RS10570 2117471 .. 2117500 +  -2.9  -3.59979   TTCTGTTCTATGGCC       GATAATGCGAAAG AGTT CTTTTCCATAATC        TTTAACATAAACAAC  50 427
        cgeA NONE
        cgeB 2129071 .. 2129090 +  -9.4  -5.84381   CGCTTTCTTGAAAAA            TCGTTCAT TGCT ATGAACGA             TTTTTTTATTCATAG 100 30
GII90_RS10660 2131684 .. 2131712 +  -9.6   -4.6526   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTAACAGTTTAT  91 29
GII90_RS10675 2133253 .. 2133278 + -10.5  -4.12902   AAACGGTGAAAAAAA         GCACATACCGA TATA TAGGTATGTGC          TTTTCGCAGTGCTTC  89 32
GII90_RS10715 NONE
GII90_RS10720 2140584 .. 2140604 + -12.6    -5.252   AACAGTAACAGAAAA            GCGCAGTC TTCAC GACTGCGC            TTTTTTATGCACGTA 100 39
        metA 2151098 .. 2151110 +  -3.3   -4.0342   ATAACTCCTTACGAT                GCATG AAG CTTGC                TTGTTGTTGATTACA  57 213
GII90_RS10785 2152302 .. 2152324 + -12.8   -5.4659   TAATGGCGTACTTGA           GAGCATACGA AAA TCGTGTGCTC           TTTTTATTTATATTC 100 38
GII90_RS10790 NONE
GII90_RS10795 2152765 .. 2152784 + -13.6  -3.71107   GAGATGACAAATAGA            GGAGAGGC ATTC GCCTCTCC             TATTTGATTTTCATC 100 58
GII90_RS10805 2153382 .. 2153422 + -17.9  -2.84098   TCAGCTGGATGAATT  CAAAGAATAAAAACCGCAG CTT CTGCGGTTTTTATTTTTAG  TGATTGGTTAAGACA 100 16
GII90_RS10820 NONE
GII90_RS10825 NONE
        sspL 2155604 .. 2155645 +  -9.6  -3.05597   CAAAAAAAAGCAATA CAAAACGCTAGAGAGGATC TAAAC GATC-TCTCTAGCGTTCAG CTTTTCAAGCATACG  74 15
        kduI NONE
        kduD 2172086 .. 2172105 + -12.2  -5.16572   CTGACAAATAAAAAA            GCTGACGA ACGA TCGTCAGC             TTTTTTCCATTACAT 100 37
GII90_RS10925 2174676 .. 2174698 +  -9.2  -4.97402   GGCTGAAAGATGAAA           GAAGACGC ATGCAGA GCGTCTTC           TTTTTATGCGTTTTC 100 52
GII90_RS10975 2182614 .. 2182638 + -14.5   -3.6471   CTTTCCAAAAAATAA          GCATGAATGAA CGA TTCATTCATGC          TTCTATCATTTAAAA 100 16
GII90_RS10985 2183424 .. 2183450 + -12.4  -3.13382   CTATAAAAACGAAAA         GAAGACAGCC TTTTACC GGCTGTCTTC         TCTTGCAATTTCATC  87 52
        sspM 2184402 .. 2184424 +   -15  -5.04249   CGCCCTTCTACGTAA           GAAGCAAGGA ATT TCCTTGCTTC           TTTATTTTTTCAGCC 100 26
        recU NONE
GII90_RS11015 2188824 .. 2188846 +   -12  -5.14563   AAATTAAACAAAAAA           GCCGTCACCT TTG GGGTGATGGC           TTTTTTGGTACACAA 100 34
GII90_RS11110 2206514 .. 2206531 +  -4.1  -4.18908   TCATTCCATTTTTCA             TGAAAGC TTGT GCTTCCA              TTCTTTTGGACATCT  62 410
GII90_RS11295 2238198 .. 2238222 +  -9.4  -4.64846   ATCATAATACAAAAA         GCCC-AAACCA CATA TGGTTTTGGGC          TTTTATCATTTATCG  91 34
GII90_RS11385 2254614 .. 2254629 + -10.4  -5.68438   AAGTAACTAAAAAAA              GCTCCC GAAC GGGAGC               TTTTTTATTTAATGG 100 41
GII90_RS11395 2257294 .. 2257313 + -10.8  -5.97979   CCATAATTAAAAAAA            CTCAAGCT ATAT AGCTTGAG             TTTTTTTATTGTTCT 100 35
GII90_RS11475 2272002 .. 2272025 +   -11  -3.60395   AACGCAGAAAAAAAA          GCAGAGACTG ATCA CAGCCTCTGC           TTAATTATTGTATGA  84 15
GII90_RS11515 2277976 .. 2277988 +  -2.7  -3.32343   TATATTCCCGGCAGT                TGAAG ACT CTTTA                TTATAAAACTCTGAA  46 7
GII90_RS11530 2279946 .. 2279966 + -14.1  -3.10775   TGGCCAATAAAAAAA            GCTTCCTCT CTA AGAGGAAGC            CTTTTGCCTGCCGAT 100 126
GII90_RS11540 2281544 .. 2281561 + -12.7  -4.91657   ATTCAAATAAGAAAA             GCGCCGA AAAA TCGGCGC              TTTCTTTTATTGCTT 100 31
        ansR 2302451 .. 2302464 +  -2.5  -3.51563   TCAGCTGACTGCACA               TATAA TTCA TTATA                TTCTCTGCCGATTTT  48 515
        mciZ NONE
GII90_RS11680 2304876 .. 2304897 + -12.3  -4.69415   CTCATAGCAGAAAAA           CCAGCACCT GTAC GGGTGCTGG            TTTATTTATATTGAT 100 34
GII90_RS11690 2306207 .. 2306232 +  -9.8  -5.47159   CAACAGAATAAAAAA         GCGAAAG-GCC TCTTC GGCTCTTTCGC         TTTTTTATGTTACAG 100 30
GII90_RS11730 2310817 .. 2310830 +  -9.5  -3.27525   CTGTCAGTTCTTTCA               GCCGC TGAT GCGGC                TTCCCTTTGAAAACA  75 49
GII90_RS11735 2312857 .. 2312904 +  -5.6  -2.85361   AATGCCCGTCTCCTC CGGCAAAAGGATGCC-TGTCTCG GTA CAACACACGATAGCCTTTTGCCG TCAATTTTTCAGTCA  51 308
GII90_RS11765 2318624 .. 2318644 + -14.1  -5.93252   ATGTAAGGACAAAAA            CAGAAGGCA CAG TGCCTTCTG            TTTTTTATTTTTCCC 100 41
        namA 2321490 .. 2321513 + -12.6  -6.20267   TGGTAATGCCCATAA          GAGATATCCT GTAG AGGATATCTC           TTTTTTTATTTTTAG 100 35
GII90_RS11780 2322562 .. 2322584 + -10.8  -3.30441   ATTAACATCTCCTTA           TAAAACGTAA TGA TTACGTTTTA           TTATACAACGTCATC  82 236
GII90_RS11795 2325260 .. 2325287 + -13.6   -5.0538   AATAAGAAGAAAAAA        GCCGAAAATGTT TACA AGCATTTTCGGC         TTTTTTACGCTGAAC 100 39
        mifM NONE
        yidC 2329356 .. 2329381 + -11.2   -5.5604   GGTGAAATAAAAAAG         CAACCCCGTGC AAAAA GC-CGGGGTTG         TTTTTTGTTACTTGC 100 31
GII90_RS11820 2330259 .. 2330293 +  -8.7  -6.09196   AGGAAATGGAGCTAA    AAAAACCCGA-TGCGG GAAA TCGCACTCGGGTTTTC     TTTTTTTATTTTGCC 100 26
      prli42 2333843 .. 2333853 +  -2.4  -3.35342   CCAAGCGGGTTATCA                 GGAG ATC CCCC                 TTCAATATTTTTCTT  45 316
GII90_RS11875 2339215 .. 2339231 +  -4.3  -3.07962   TGCAAATCCGTTGAC              TCTCCCC TAG GAGGAGG              TCTTACAGTATAAGG  50 66
         bmr 2340448 .. 2340484 + -19.7  -4.12254   GCCAGCACGTGATAA    GAAGCGCATTCTTTGTG TAC TGCAAAGAATGCGCTTC    TTCTTTATACTGATG 100 29
        bmrR 2341369 .. 2341403 + -13.2  -5.04356   TAAAGCATAGAAAAA     GAGCATTTTTTGAA ACAAAAC TTCAAAAAATGCTC     TTTTTGCTTATTTAG 100 41
GII90_RS11930 2351886 .. 2351903 + -12.7  -5.83226   GATAGCTGAAAAAAA             GCCGGAG AATG CTCCGGC              TTTTTTTGTTGCATT 100 36
GII90_RS11980 NONE
GII90_RS11985 2362186 .. 2362209 + -15.4  -5.24449   AGATTAATGTGCAAA          GACTGCCGAA ACGA TTCGGCAGTC           TTTTTTCCCTTTATA 100 34
GII90_RS12125 NONE
GII90_RS12130 2387102 .. 2387120 +  -6.7  -6.19302   CTGTCCGTCTTTTAC             CTAGCTC AATCA GGGCTAG             TTTTTTTTGTTGTGT 100 66
GII90_RS12150 2390001 .. 2390021 + -14.1  -5.48623   AAGAAATAAAGCAAA            CAGCTGTCT GGT AGACAGCTG            TTTTTATTTATCTTT 100 32
GII90_RS12170 NONE
GII90_RS12175 2396907 .. 2396929 +  -4.2  -3.41229   CATTCGACATCATTC           TCGTTTTTTT TGA GAAAATACGA           TTATAATAAAGGTAT  53 50
        sinI NONE
        sinR 2397599 .. 2397633 + -13.8  -4.42386   AGAAAATCCCAAAAA    GAGGAGT-AGTGCCT GAGCAG AGGCACTAACTCCTC     TTTTGTCAATAACCA 100 17
GII90_RS12205 2400459 .. 2400494 +  -8.5  -4.46835   ATATTAGAAGAATAT    C-AATAAGGTCCTCCA TTTTT TGAAGGACCTTATTCG    TTTATTTGCGGTTAT  86 20
GII90_RS12255 2407524 .. 2407552 + -11.1  -2.80821   ATAGAAGTTAAAAAA        GCTGAATAGCC CGTGAAA GGCTGTTCAGC        TGCTATCTTTCAAGA  79 17
GII90_RS12265 2408598 .. 2408637 + -12.3  -4.77036   TGAACAGGTGAAAAA  CCGAAGATAAGCTGATT CGTATA AATCAGCGGATCTTCGG   TTTTTCATCATGCAG 100 41
GII90_RS12275 2409512 .. 2409536 +   -13  -5.44119   CATTAAATGCAGAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA 100 35
GII90_RS12285 2410510 .. 2410531 + -13.1  -4.97405   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATGGCT 100 28
GII90_RS12350 NONE
GII90_RS12355 2421806 .. 2421822 + -12.3  -5.52384   AACACGATAAAAAAA              CAGGCTG ACT CAGCCTG              TTTTTTTCATCCAAA 100 31
GII90_RS12405 2432198 .. 2432210 +  -3.5  -5.04325   GTAATTAATAAAAGT                TAAAT TAT ATTTA                TTTTTATCCTTTAAG  70 23
GII90_RS12415 2433659 .. 2433669 +    -4   -3.9009   TCGGCGAAGACACTG                 TTAC AAT GTAA                 TTTGTAAAATAAATT  56 64
        ispG 2434863 .. 2434899 + -16.2  -3.02511   AATTAAAAGAAGAAA   CACAAAAAGCTTGACGG GAAC CCGTCAAGCTTTTT-TG    TGTTAGAAAAATGGA 100 12
GII90_RS12430 2436003 .. 2436035 +   -15  -2.91429   ATACGCGTCAATAAC      TGAAAAAGGAGCCC AAACC GGGCCCCTTTTTCA      TATATACGCATTTTA 100 23
GII90_RS12445 2437872 .. 2437903 + -14.7  -3.27766   AAACAATTTACAAGC      TAAAAAATGGGGG TGTTAT CCCCCATTTTTTA       TTGCTGTAAAATCTT 100 23
GII90_RS12460 2441093 .. 2441108 +  -6.1   -5.1167   GAATGCAAGAATAGA              GCCGT TTGATT ACGGC               TTTTTATATTGCCTT  83 86
GII90_RS12465 2442096 .. 2442116 + -11.2  -5.61596   AGTAAAAGCAAAAAA            CTGAGGCT GTAAA AGCCTCAG            TTTTTTTATAGAAAT 100 22
GII90_RS12595 2466266 .. 2466287 +  -7.3  -5.15969   GGCTAAATAAAAAAA           TCGGTACAT TTTA ATGCACCGA            TTTTTTAGGTTAAGA  90 31
        rpsT 2480710 .. 2480731 + -10.9  -5.77856   TGCATAATATAAAAA           CGATCCTCA ATAA TGGGGATCG            TTTTTTTCATTTCTT 100 34
GII90_RS12675 2482137 .. 2482158 +  -8.7  -5.31059   AACAGCGACTGCCCG           GGCTGCTGA TTTC TCGGCAGTC            TTTTTTAGTTCGTCT 100 39
GII90_RS12695 2486713 .. 2486734 + -11.7  -5.04601   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGATTTCTGCG 100 83
GII90_RS12740 2492477 .. 2492487 +  -5.4   -4.3739   ACATGTGAAGCGCCT                 CCTT AAT AAGG                 TTTTATAACAGCCTA  70 268
GII90_RS12755 2495085 .. 2495110 +  -3.9  -5.71712   GAAGGTGCCAAAAAA         ATAAGGAGGCT TGTT GGCCCCCTTAC          TTTTTTTCTGTCGCA  85 22
GII90_RS12765 2496980 .. 2496999 +  -9.3   -4.0274   AGGATTGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTTACTACTGCA  85 31
        rapE NONE
        phrE 2505106 .. 2505121 +    -9  -5.42164   TTCTGATTCCCTTTA              GCCGTT TCAT AACGGC               TTTTTCTTATTTCTA 100 59
GII90_RS12820 NONE
        yqcG NONE
        yqxf 2507926 .. 2507952 + -13.8  -5.04868   AGAAGAGTCACTTTA         TAAGCCCCTCTC AAT GAGAAGGGCTTA         TTTTATTTAATTTGA 100 53
GII90_RS12835 2508458 .. 2508479 +  -3.7  -5.97575   GTTGGACTAACCTTA           GTTGAAAAG CCTG CTTCTCGAC            TTTTTTTTCTAGGTT 100 321
GII90_RS12935 2523801 .. 2523826 +  -7.5  -6.14618   GCCAGCATTTGTACA         AGCCGGAGTGT TGCA GCACTCCGGTA          TTTTTTTATTTTATG 100 118
GII90_RS13045 2540053 .. 2540073 + -11.9  -4.41137   ATTCAAGTTAACTAT            GAGGAGGTT TAT AGCCTCCTC            TTTCTTATAGTTCTA 100 30
        sknR 2546913 .. 2546929 +  -3.7  -5.51353   TGAATCCTTTACAAA              CCCTT ACGTGAC AAGGG              TTTTTGTTGTTTTTC  81 153
GII90_RS13130 2549228 .. 2549248 +  -3.3  -4.36914   ATTGAAAAGCGGGCG            CTGATGAAG ATG TTTCATGAG            TTTTATCGGGCAGAG  62 355
GII90_RS13140 2549775 .. 2549792 +  -9.9  -2.71177   AACAAATAAAAAAAC             CGATGGT TTGT ACCATCG              ATCTGTTTTCTATAT  74 388
GII90_RS13170 NONE
GII90_RS13175 NONE
GII90_RS13180 2555306 .. 2555364 + -21.4  -2.86242   GGAAGGTAATAATGA TGTTTAAAAGGTGTTTTGATCCCTGTCT CAT AAACAGGGGTCAAAACACCTTTGAATCA TCGGTTTCTTTTCTG 100 105
         blt 2565711 .. 2565722 +    -3  -4.55118   ATGATGCTGCAGCTT                TGAA TTAA TTCA                 TTTTCTATAAAGTTA  62 18
        bltD 2566431 .. 2566456 + -11.3  -3.62176   TCATTGTTTAAAAAA         GCCTG-GATGAA AAT TTCATCTCAGGC         TTTAAGCATCTTATT  84 111
GII90_RS13280 2570275 .. 2570301 +  -6.7  -2.94454   TTCACGCAAAAAATA         GAGCAGTAA ACATGTGAG TTACTGCTC         TGCTTCGTTTATTCA  60 113
        gltR 2574369 .. 2574391 +    -7  -5.16071   GTATAGAGCAAAAAA           GCAAACTTCG GTA TGTAGTTTGC           TTTTTCTTCGTGATT  90 124
GII90_RS13365 2585527 .. 2585549 +  -3.5  -6.17184   TTGATAGAGCAAAAA           GCAAACT TTGACAGGC AGTTTGC           TTTTTTTTTCGTAAT 100 51
        murI 2586696 .. 2586714 +  -8.8  -5.60993   AACATGAACTAAGAA             GCGGGCTT AAA AAGCCCAC             TTTTTTTCTAACAAA 100 73
GII90_RS13375 2587793 .. 2587809 +  -7.9  -5.38497   TCGATAGTCTTAAAG              GGGGCTT AAC ATGCCCC              TTTTTTCATTTCAAT  95 82
GII90_RS13380 2588414 .. 2588444 + -14.9  -5.52096   TTACCTCATATCCAT       CAGACGCCATAAG AAATC TTTATGGCGTCTG       TTTTTTATTAGATTT 100 50
GII90_RS13400 2591497 .. 2591521 +    -8  -4.12188   TATCATATTAAGAAA         GACAAGAG-CA TGTT TGTCTCTTGTC          TTTTCCACATCGTGC  76 90
GII90_RS13415 2595463 .. 2595483 +  -8.4  -4.29845   TACTGCAAATAAAAA            GATACCAA CATCA TTGGTATC            TTTTAGATTGAGTTC  81 234
GII90_RS13425 2597078 .. 2597101 +  -8.2  -4.96848   ATAAACAAAACGGAA          GCACTGATAA AAAA TAATCAGTGC           TTTTTATATGGCGAG  95 37
GII90_RS13430 2598348 .. 2598374 + -12.4  -3.22298   TCATCGCAGCAAAAA         CCATACCAACTA TTG TTGTTGGTATGG         TTCGTCCTAGATAGG  87 355
GII90_RS13455 2600595 .. 2600606 +  -5.8  -3.69323   TCATCAATTGAAAGG                GAGG TAAG CCTC                 TTTGAATAATGATCA  63 30
GII90_RS13460 NONE
GII90_RS13465 NONE
GII90_RS13470 NONE
GII90_RS13475 2602978 .. 2602991 +  -2.4  -4.10453   TTTTAGGCCTGCTTT               TGAG CTTTGC CTCA                TTTTCACGCAATTTC  55 341
GII90_RS13485 2603748 .. 2603767 +  -9.4  -4.14004   TTTAAAAAACCCTTG            CCTTAAAG CAGA CTTTAAGG             TTTATCGTTATGTTG  85 49
        adhA NONE
        yraA 2605551 .. 2605575 + -12.2  -5.09426   TTAAAATAACAAGAA          GGCACAGACT GTTCG GGTCTGTGCC          TTTTTTAAAATTAAG 100 32
GII90_RS13530 NONE
GII90_RS13535 2615496 .. 2615520 + -10.1  -5.07275   GTGAAATAAAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTATATGTGTCA 100 32
GII90_RS13545 2617223 .. 2617247 +   -13  -5.64274   CTCTTACCCCAAAAA          CAAGGCTTGT ACAAA ACAAGCCTTG          TTTTTTTATGCATAA 100 51
        sigV 2617875 .. 2617889 +    -5  -3.18264   GCGCATTCAGTTGAC               GAAGGA GGA TCTTTC               TTAATGGATAAGAGA  53 7
GII90_RS13555 2618759 .. 2618780 +  -4.5  -4.72127   TCGATAAAATAAAAA           CATCCAT CTAAGATT ATGGATG            TTTTCTCTCTTCTCT  71 34
        oatA 2620762 .. 2620796 +  -8.8  -4.16182   TCAGGCGATGAAATC     GTAAAAAAGAGATC CTATACA GATCACTTTTTTAC     TTTAGTTTCTGATCG  81 22
GII90_RS13565 2621401 .. 2621423 + -16.4  -4.90471   TCATATGCAAAGCAA           TCCCGCCAAT CAG ATTGGCGGGA           TTTTATATTTTACAT 100 237
GII90_RS13605 NONE
GII90_RS13610 2632204 .. 2632225 + -10.2  -5.84381   ACAATAACAGAAAAA           CAGCCATC TCTGAT GATGGCTG            TTTTTTTATTCGTCG 100 34
GII90_RS13640 2636429 .. 2636461 + -19.3  -4.75954   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT TTA ACCCGGCTGCTTTTG      TTTATTTTAGCTTTT 100 28
GII90_RS13710 NONE
        glnH 2651482 .. 2651508 + -10.9   -2.8372   GAATAACAACCATCC         CGGGATGAGCA GGCGA TGCTCATCCCA         ATTTGATAAGGAGTG  79 35
GII90_RS13720 NONE
GII90_RS13725 2652861 .. 2652882 + -11.7  -4.74103   GGCAAACATAGAAAA           GGATACTCT TTGG AGAGTATCC            TTTTTGCATTAAAAC 100 30
GII90_RS13770 2661146 .. 2661184 + -14.8  -3.08415   TGAAAAGAAAATAAA   ACAAAAAAACAGCCTTGA TCA TCAAGGCTGTTTTTATGC   ATTATTTATCCTTCA 100 27
GII90_RS13800 2667599 .. 2667614 + -10.4  -6.09196   CTTCCAATAAAAAAA              GCTGCC TTTT GGCAGC               TTTTTTTATTTTGAA 100 31
       spoVB 2678665 .. 2678683 +  -4.5  -3.99327   TTGATCATCCGATAA             TGGTCAC GTGCG GTGCCCA             TCTTTTTCATCAATA  59 26
GII90_RS13855 2679904 .. 2679949 + -14.2  -3.01416   GGGGAAACAGGTCTT CCACATAAAAAAGAGCGGGC TCACTT GCCCGCTCTTTTTTGTTTGC TATGTATAGCTCCTG 100 18
GII90_RS13905 2688299 .. 2688342 +   -14  -5.42514   AAAAGAAAATATTCT TAAATCAAAAAGGCAGCCGC ACAA GCGGCTGCCTTTATCATGTA TTTTTTACTTTCTGA 100 23
GII90_RS13915 NONE
GII90_RS13920 2688997 .. 2689019 +  -9.1  -5.93252   GCCTCTGTAGAAAAA           CGCAGCGTA GTCGA TACGCCGCG           TTTTTTCTTTTTCCC 100 31
GII90_RS13925 2690621 .. 2690645 +  -8.5  -5.24531   CTGAACATACTAAAA          CCGGCCCGA TATGACC TCGTGCCGG          TTTTTTATGAACGAT 100 37
        nifS NONE
GII90_RS13965 2698808 .. 2698821 +  -5.2  -5.71983   TAAAGACTAAAAAAA               GCCC TCTAGT GGGC                TTTTTTTATAATTGG  88 31
GII90_RS13990 2702390 .. 2702411 +  -5.8  -5.12617   ATATTGCAAAAAAAA           CTCCAGTC ATCATC GACCGGAG            TTTTTTGAATCATTA  83 112
GII90_RS14075 2717525 .. 2717537 +  -4.9  -5.55695   AAGACGTGGACTCGT                TTTCA GCC TGAAA                TTTTTTCTCTTGTTC  88 61
GII90_RS14120 2727406 .. 2727439 +    -7  -5.53991   AATCTATACGATAAA    T-A-AAACCGGTAGAG GATC CTCTACCGGTTTATCA     TTTTTTTGATCGCTC 100 27
        cotQ 2745680 .. 2745702 +  -2.6    -5.093   TAAAGAATACCACAA           GGGCCGAA CATCTAT TGCGGTCC           TTTTATTGTTTTAAA  70 38
GII90_RS14195 2746306 .. 2746342 +  -6.1  -5.80817   AGACGGCTTTATAAG   GATAGATAAGTGCAGG GGAAGG TCTGT-CTTATCTATC    TTTTTTTATATTCAC  93 40
GII90_RS14200 2747321 .. 2747345 +   -13  -5.50723   ACCGACAACAAAAAA          CCTCAAATCC TAAAT GGATTTGAGG          TTTTTCTTTTGGTAC 100 50
GII90_RS14265 2757018 .. 2757060 + -18.1  -2.71364   ATGAAAGACCCAGTG TAATCAAAAAGGCGGTGACT GCAT AGTC-CCGCCTTTTTGATTG TCATTACACAGCTGA 100 23
GII90_RS14345 2774523 .. 2774544 + -13.1    -5.252   CGTTCATAGAAAAAA           GCTTGCAGA TTTC TCTGCAAGC            TTTTTTATCAGCCTC 100 32
GII90_RS14360 2778546 .. 2778578 +  -8.3  -3.09823   GACTGAGGAATCTCC      TGGTAAGGCGCTCCG TTT TGCAGCGCCGTGCCG      TATACTTTTACGCCC  66 267
        sspI 2779461 .. 2779478 + -10.5   -5.9218   GAATAAGACATGAAA             CCGGGTG ACAG CGCCCGG              TTTTTTTCTTATATA 100 35
GII90_RS14375 NONE
        glcD NONE
GII90_RS14385 2783477 .. 2783501 + -13.7  -4.50943   AAACATCATGAGAAA          GCCCAAAACAG ACA TTGTTTTGGGC          TTTTGTGCGTTATTC 100 30
        ysdB 2799412 .. 2799438 +   -16  -4.87665   AAACTCGCAAAAAAA         GCAGAAGAGCGT TAA ACGCTTTTCTGC         TTTTTATAAATCAAA 100 11
GII90_RS14485 2802015 .. 2802035 + -12.6  -3.41602   CATAAAATAAAAAAA            GCCAAGGC ATTCA GCCTTGGC            TTATCCTCCGATCAG  93 36
GII90_RS14510 2806766 .. 2806791 +   -12  -5.95449   AGAGAAATAAAAAAA         GCATGATCTC TTCAAT GAGATCATGC          TTTTTTATTTTATTT 100 31
GII90_RS14560 2817543 .. 2817561 +    -3  -4.07568   GATGGAAAAACGAGA             TCGGCAGG AAG CCTGACAA             TTTTAAAGGAGGAAA  55 10
GII90_RS14565 2818436 .. 2818456 + -14.1   -5.5208   TTAATGGCCAAAAAA            CACCGTTCA ATA TGAACGGTG            TTTTTTGTATTATGC 100 37
        ytvI 2831827 .. 2831852 + -12.6  -5.68438   TCAGCAAAAATAAAA         CGGCAGCCGT TTTTTC ATGGCTGCCG          TTTTTTATTTGATGA 100 28
        ytrH NONE
        ytrI NONE
GII90_RS14670 2843436 .. 2843458 +  -8.5  -2.73829   ACAGATGAACACTAA          GAG-AGAGGG TCTC CCCTCTACTC           GTGTTCTTTACATAA  65 26
GII90_RS14680 2844822 .. 2844850 +  -7.5  -3.96483   GCTGAAAGAGATCAC       GCGTAAGGGGCG CCTGAA CGTCCCTTA-GC        TTCTTTCCATCAGCT  74 20
GII90_RS14750 2857425 .. 2857450 + -11.9  -3.63968   CTGAAAAAATAAAAA         CCACCTCCTGA TTCA TCAGGAGATGG          TTTCACGGTTTAAAG  90 41
GII90_RS14825 2869586 .. 2869615 + -18.1   -3.0558   CTTTTTTATAGAAAA       TAAAAGGACAGGC TGCT GCCTGTCCTTTTA        TGATTTCTCATATAC 100 30
        brnQ 2877190 .. 2877211 + -13.7  -4.46212   GTTAATGTCACAGAA           CGCCTGCGT TATT GCGCAGGCG            TTTTGTAATAAAAAA 100 36
        hisJ 2880148 .. 2880168 +  -8.3  -4.99861   AAAATGAGGCAGCGG            CAGCGTTAA ATA TTCACGCTG            TTTTTCTCCTTCCTC  91 208
GII90_RS14875 2881211 .. 2881235 + -10.1  -6.17669   CGCAGTAATATAAAA          GCCCAAAAC TGATATC GTTTTGGGC          TTTTTTTATTTTATT 100 33
        rpsD 2883890 .. 2883912 + -12.6  -5.63504   TAATCGTTTTAAAAA           CCCCTGCCGC TAT GCGGTCGGGG           TTTTTTTATCGGCTT 100 38
        acuA NONE
GII90_RS14910 NONE
GII90_RS14915 2890105 .. 2890124 +  -8.6  -5.25735   GAACAAAGTAAAAAA            CGACCTTT ACGA AGAGGTCG             TTTTTGATTTTTTAA 100 30
GII90_RS14985 2902745 .. 2902780 +  -4.7  -4.37886   CAGAATAAGAAAAAA    GCTTGTCGATCCGGGC TTACT GCTCGT-TCAACAAGC    TTTTATGAAACCTAC  68 33
GII90_RS14995 2904363 .. 2904386 + -12.4  -5.60689   ACAAGCAAAAAATAG          AAGCCGCTGC CTAT GCAGCGGCTC           TTTTTTATTATATCG 100 47
GII90_RS15015 2908389 .. 2908408 +  -9.3  -4.12188   TGCCGTACATGCTCA            GCCAGCT CTCCCA AGCTGGC             TTTTCGACGTAGTGG  80 196
        cysK 2914932 .. 2914967 + -15.6  -4.10161   TGGTCATTTATTTAA    AAAAAGGACTGGCTTC AGCA GAAGCCGGTCCTTTTA     TTTTGCAAGCTCGTA 100 26
        pbuO 2917767 .. 2917786 + -12.2  -5.36441   GGATAGACCAAAAAA            CCCAAACG TCGC CGTTTGGG             TTTTTTATGTAAACA 100 41
GII90_RS15070 2920261 .. 2920281 + -12.6  -4.94902   TGCTTATAAATAAAA            CCCCGCAT TCGGT ATGCGGGG            TTTTTGTCATGCTTG 100 119
GII90_RS15085 2924153 .. 2924167 +  -8.5  -3.78124   TGCAGGGCTAAATGC               CGGGC AATAC GCCCG               TTCTTAATCATTACT  74 4
        opuD 2925909 .. 2925934 + -16.3  -5.28942   CATATTAACAAAAAA         GATCTTTCCGC GCCT GCGGAAAGATC          TTTTTATTTGCGATA 100 33
GII90_RS15125 2933309 .. 2933333 +  -9.4  -4.67556   GAAGCATGTAAAAAA         CCCAAAACCGC TTGC GCG-TTTTGGG          TTTTTCCAATGTTAT  91 30
GII90_RS15180 NONE
GII90_RS15185 NONE
GII90_RS15190 NONE
GII90_RS15195 NONE
        melA 2949728 .. 2949749 + -10.2  -5.52347   GAATACAAATAAAAA           CTAGGGGA CCGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 29
GII90_RS15220 2954576 .. 2954620 + -19.7  -4.12902   TGGATCTTTCAGATT GTTGACAAAATCCTAAAATGG TTT TCATTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 61
GII90_RS15230 2956913 .. 2956931 + -13.2  -5.19879   AACGATAAACAAAAA             GCTCCAGA ATG TCTGGAGC             TTTTTCTGTTTCACA 100 33
GII90_RS15295 NONE
        mraW 2969076 .. 2969100 +  -9.4  -5.67283   GCCATCGAAAAAAAA          GCTCAGATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAATT 100 8
GII90_RS15315 2971613 .. 2971634 +  -7.3  -4.00407   AATAACCATCGTTAA           CCCGGAC-GT CAT ACAGTTCGGG           TTTCGATTTTTCCAT  73 88
        pckA 2978665 .. 2978694 + -13.7   -4.4078   CTCGTATAAAAAACA       AAAGCCAAGAGCA ATTA TGCTCTTGGCTTG        TTTTAATTGACGGAA 100 32
GII90_RS15350 NONE
GII90_RS15355 NONE
GII90_RS15360 2982506 .. 2982523 + -12.7   -5.4833   GGAGGACATAAAAAA             CCCGGCA CATG TGCCGGG              TTTTTTATTCAATCC 100 30
        ytzI 2984558 .. 2984572 +  -6.4  -5.58454   TTGGACTTTTAAGGT               CGGCAT GCT ATGCTG               TTTTTTTGCTGTGAC 100 94
        yidD 2985953 .. 2985983 +  -5.5  -3.36694   AACGTTTTCAGGGAA      CAGCGGGTGATGTT TAAT AACATC-TACGCTG       TCTTTCACACTCGCT  56 109
GII90_RS15410 NONE
GII90_RS15415 NONE
GII90_RS15420 2989610 .. 2989636 +   -11  -4.74706   GATTTATAATTAAAA         GAAAGAGCTG CATCAGC CAGCTCTTTC         TTTTTGCATGTTGAG 100 32
GII90_RS15475 3002270 .. 3002292 + -16.4   -4.4267   ATCTCCACGCTGATT           GAACCCCCAA TTA TTGGGGGTTC           TTTTCCGTTTTCAGC 100 24
GII90_RS15485 NONE
GII90_RS15490 NONE
GII90_RS15495 3006736 .. 3006759 +  -7.4  -5.08824   AAAACATAAAACCTA          CAGCTCGTGT TGCA AAACGGGCTG           TTTTTTCGCTACAGA  90 32
        cotI 3010714 .. 3010730 + -10.8  -4.04579   TTAAGACCATCATTT              CCCCCG CATAT CGGGGG              TTTGATATTTATAAG  89 37
GII90_RS15520 3011259 .. 3011275 +  -9.4  -4.63527   CTGTGAACAAAAAAA              GCCGCT TATAC AGCGGC              TTTTTCACATCATCG  91 35
        thiT 3027439 .. 3027463 + -17.2   -4.9755   GCGTAAAAGTAACAA          TCCCCCAGCG AATTC CGCTGGGGGA          TTTTTCGTTATCTGT 100 35
GII90_RS15690 3030720 .. 3030765 + -16.5  -2.95515   ATGAAAGAAATTAAA GAAAAGATAGAAAGGGCCTGAT TTA ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTTCGCT 100 5
        gbsR 3034860 .. 3034877 +  -9.1  -5.58454   AAGTAAAGCAGAAAA             CGCCTGG GAAA CTAGGCG              TTTTTTTGATGTAAC 100 35
        bslA 3035601 .. 3035618 +  -9.1   -5.2696   GCAACTAATGTAAAA             GACCGGT TAAC GCCGGTC              TTTTTTGCGTTTTAC 100 33
        ktrA NONE
        ktrB 3037974 .. 3038012 + -14.2  -3.13475   GTTTACAGGGTGATA  TCA-AAAAAATCCGGCG TGCAGT CGCCGGATTTTTTATGA   TTCGATATGAGATTG 100 28
        cdoA 3042149 .. 3042170 +  -8.8  -4.67234   AATTGACAGAAAAAA           TAAGGCTC GGAAAA GAGCCTTA            TTTTTCGACTTACAT  90 281
        iolU 3045443 .. 3045470 +  -9.9   -5.4505   TCAAGCTTAAAAAAA       TCCGCCCGCGTGC AAAT GC-CGC-GGCGGA        TTTTTTATTAGACAA 100 31
GII90_RS15815 3060858 .. 3060906 +  -8.8  -3.62864   TGTTCCGTCTCTTTT CCGCATCGTCCGCTAAAAAGCC CCATC GCCTATTTTCCGGACGATGGGG TTTCAAATGCCTTTC  75 10
        mstX NONE
        kbfO 3067691 .. 3067718 +  -9.2  -3.25169   ATGATCGTATTCCCA        GCCGC-CGTTTAT CAC ATAACCGAGCGGC        TTCATCACTTGTTCC  70 331
GII90_RS15890 3072688 .. 3072711 +   -11  -5.22794   TGCATGAAATCAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTTCATGCTTAT 100 68
GII90_RS15910 3075956 .. 3075970 +  -7.1  -5.41143   CAAATAACAAAAAAA               CCGGT GCTGA ACCGG               TTTTTTTAAGGCGTG  95 34
        patB 3077500 .. 3077527 +  -7.8  -3.71848   AAATATAGCTGTAAA        CGCCTTTACG TCTTCATT TGTAAAGGCG         TTCTTAATAAAGGAA  72 39
        kinB NONE
        kapB 3079331 .. 3079352 +  -6.6  -5.08824   TTTAACCGGCCATAA           CCCAGTCT GACAAA AGATTGGG            TTTTTTACGTCGCGC  86 26
GII90_RS15945 NONE
GII90_RS15950 3083312 .. 3083323 +  -3.6  -3.62597   CATCTGGAAAGGAAC                GCTG CAAG CGGC                 TTATTAAAGGATCGG  52 7
GII90_RS15955 3083802 .. 3083841 + -22.6  -3.08073   GCCATCACAGATTGT  TGACAAAATCCTAAAACG GCTT CGTTTTAGGATTTTGTCA   TCTATTCAGCGTGAT 100 63
        maeL NONE
        maeM 3087009 .. 3087033 + -12.9  -5.02502   ATATCTATAAGAAAA          CGCACTGCTTG CTT TGAGCAGTGCG          TTTTTCTGTCATATC 100 31
        nupN 3088563 .. 3088589 +  -8.1  -4.82111   TGAATAAGAATCGCA         GGGATAAGG AGGTCGAGC CCTTATCCC         TTGTTTTTCTTTTAT  95 34
        nupO NONE
        nupP NONE
        nupQ 3092169 .. 3092193 +  -6.4  -5.67063   AAAGATAAACATTCT          CCCCTGGGAA GACGA TTCTCAGGGA          TTTTTTTCTAATCCA  93 33
        maeN 3093669 .. 3093691 +  -9.9  -6.08342   CTTCATAAACAGAAA           GAGTTCCGT TTTAT GCGGAACTC           TTTTTTTATTTATTC 100 33
GII90_RS16005 NONE
GII90_RS16010 NONE
GII90_RS16015 NONE
GII90_RS16020 NONE
GII90_RS16025 NONE
GII90_RS16030 NONE
GII90_RS16035 3099919 .. 3099944 +  -7.6  -6.08342   ATTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG 100 33
GII90_RS16070 3105143 .. 3105166 +  -4.5  -4.40173   ACAAACACCGAAAAA          GACCGCAAC GCTAAA GTTGTGGCC           TTTTCGCTTTGTCAT  66 44
GII90_RS16075 3106032 .. 3106045 +  -3.9  -4.42386   CAGCATAATGGCCTG               TTGAA TGCT TTCAA                TTTTCTGGCTCAAAC  64 451
GII90_RS16115 3111767 .. 3111789 +  -2.7  -4.72272   CGCTTAACTGAAAAA          TAGGACGTCC TGTT GTACG-CCTA           TTTTTCATGCGCAAG  65 23
        adeR 3125756 .. 3125785 + -16.7  -6.17669   TATCAAACTTCGGCA       CATGGATTTGTGA AATT TCACAAATCCATG        TTTTTTTATTTTCTT 100 13
         ald 3127017 .. 3127040 + -11.8  -6.04324   CTTAATTCACAATAA          GCTTGCAGAA AGAT TTCTGCAGGC           TTTTTTATTTTTTAA 100 36
GII90_RS16175 3127806 .. 3127826 + -11.2  -4.74801   CGTAAGATAGAAAAA            GAGACTGC GGCAA GCAGTCTC            TTTTTGATAAGATTA 100 36
GII90_RS16220 3142459 .. 3142480 +   -13   -4.8048   ATCATAACGAGAAAA           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 67
GII90_RS16235 3146105 .. 3146126 + -11.5  -5.00196   TTCATGTAAAAAAAA           CGCTCCTGC TTTC GCTGGAGCG            TTTTATTCTTTCACC 100 32
GII90_RS16260 3150138 .. 3150163 + -12.7  -5.63517   TAAATAATAAAAAAA         GGAGCTTGTGTC TGC GACACA-GCTCC         TTTTTTATTTGAAGA 100 34
        guaC 3151579 .. 3151611 + -12.8  -4.51699   TTAATCATAAAAAAA     CGCCAAGTC-AGCGG TTCT CCGCTTGAGTTGGCG      TTTTCTGCTACTTCT 100 37
GII90_RS16305 3157493 .. 3157511 +   -11  -4.60797   AATGATAGAGAAGAA             CCGCTGAT CAA GTCAGCGG             TTTTCTGTATACCCA  95 39
GII90_RS16315 3158274 .. 3158300 + -16.7  -5.45652   TCTTTTAATAAAGCA         GCCAGGCTGAT ATTTG ATCAGCCTGGC         TTTTTTATTAGAGAT 100 33
GII90_RS16345 3165548 .. 3165568 + -12.5  -5.08169   CGGCATACAGAATAA            GGGCACCCT TTT AGGGCGCCC            TTTTTTCAAATGTAT 100 26
GII90_RS16365 3167844 .. 3167860 + -12.3  -4.22338   TAGGAATGACAAAAA              CGCCAGA TGA TCTGGCG              TTTTGGCATTATGCT  93 16
GII90_RS16375 3169977 .. 3170018 + -10.3  -6.12458   ATACCAAAAAAAGAA GTAACAAA-AAGCCGCCTCT TCA ACAGGCGGCTTATTTGCTGC TTTTTTCTTTTTTTG 100 22
        pucR 3177927 .. 3177940 +  -2.4  -2.64472   CATTTTCTTACAAAA               CGAA TCGTTT TTCG                TCACTTTCAGCAATC  40 50
        pucJ NONE
        pucK NONE
        pucL NONE
        uraH 3182540 .. 3182564 + -17.2  -4.67234   GGGGGAGTTAAGAAG          GAAGCCCGCC TCACC GGCGGGCTTC          TTTTTGCACTTCAAT 100 30
        yuzJ 3183139 .. 3183165 + -14.6  -3.93383   CCTCCCTGTCCGACA         GACGCCATAAGA AGT TTTTATGGCGTC         TTTGCTATGTGTTCA 100 74
GII90_RS16480 NONE
GII90_RS16485 3192531 .. 3192552 + -14.5  -4.91109   TGGCCGTAAGAAAAA           GGTGCTCCT TTTG AGGAGCACC            TTTTTCTAATACACA 100 32
        frlR 3194776 .. 3194786 +  -3.2  -3.17443   TATAAAAGAATCTCC                 CGCT CCA AGTG                 TATCTATTATATCAG  46 230
        sspG NONE
GII90_RS16540 3202037 .. 3202057 + -10.4  -5.20333   AAGAAGAGTAAAAAA           CCGC-GGCC CCTC GGCCAGCGG            TTTTTCTTCTGCATA 100 30
GII90_RS16650 3220262 .. 3220282 +  -6.1  -3.99805   TGGGACAATCATAAT            GCAGCTG CTTCCCA CGGCTGC            TTTCACTTTTTCAAA  65 27
GII90_RS16660 NONE
GII90_RS16665 3221894 .. 3221922 +  -5.4  -5.71712   CAACATTAGTAAAAA       GGATACGATGTTC TTTC GGGCATC-TATCC        TTTTTTTGTGTAAAA  88 41
GII90_RS16670 NONE
GII90_RS16675 3224134 .. 3224157 +   -16   -5.4833   CCCATTAATAGAGCA          CCCCGCGGGT ATCA ATCCGCGGGG           TTTTTTATTCAATCA 100 33
GII90_RS16690 3226312 .. 3226337 +  -7.6  -4.77216   CTGAATCACAAAAAA         GCAGTCTGCT ATAATG AACAGACTGC          TTTTTGGCTATTGTT  88 12
GII90_RS16715 3231022 .. 3231046 + -10.3  -3.55551   AGCTATTCAGCTGAT          CTAAATTATAA TTA TTATAATTTAG          TATTGATTTTTATTT  82 27
        mrgA 3231579 .. 3231601 +  -9.9  -5.84011   TAGGGTAACAAAAAA           GCTGAACCT TAATC GGGTTCAGC           TTTTTGTTTTTTCTT 100 33
        cssR NONE
        cssS 3235296 .. 3235320 +  -8.7  -5.71712   ATAGCAGTGCCAAAA          TAGACTGTAGA TGT TTTGCAGTCTA          TTTTTTTATGTGAAA 100 23
GII90_RS16745 3236532 .. 3236566 + -20.2  -3.08327   AACAGCAACATATTT     AGAAGAACGGCTGCTT AAA AAGCAGCCGTTCTTCC     TATTACGCCTTTGGT 100 24
       gerAA NONE
       gerAB NONE
       gerAC 3242250 .. 3242281 +    -5  -4.28049   GGCTCTCCCTTGCTT      GCGGCGCGGATGGC ATCG GCGATTTCTGCCGC       TTTTGAGGTTTTCAA  65 316
GII90_RS16830 3253182 .. 3253202 + -12.6  -5.96219   TGTAGTATAAAAAAA            CGCATCCG TGTTT CGGATGCG            TTTTTTTTATACGTC 100 36
GII90_RS16860 NONE
        oxdC 3259178 .. 3259209 + -19.6  -3.14564   AAATAAAAGACTTGC      GGCTTGCAGAGAGC ACTC GTTCTCTGCAAGCC       TTCATAAGGAGCTGA 100 35
        rsiO 3259645 .. 3259669 + -10.8   -5.1356   TCCCAGCTAAAAAAA          GAACGCATTC CAATT GGATGCGTTC          TTTTTATTCATAGCG 100 31
GII90_RS16905 3266964 .. 3267001 + -15.8  -3.85698   GAAAGCTTGACTAAA   TAAACAAAAGAGCCGC CTGCCC GCGGCTCTTTTGCTTA    TTTATAAGGAACGGC 100 23
GII90_RS16920 3269782 .. 3269793 +  -4.4  -4.11692   TTTTATATGCTGTTT                CATG GCCG CATG                 TTTTAAACATGAGTG  61 8
GII90_RS16925 3271758 .. 3271775 +  -9.9  -5.22039   TTCCGAATGAAAAAA             TCCCTCT ATCA AGAGGGA              TTTTTTACGTTTCCA 100 31
        modA NONE
        modB 3274269 .. 3274285 +  -9.4  -5.26875   AACGCACTAAAAAAA              CTCCCC ATAAC GGGGAG              TTTTTTGATTAAAAC 100 31
        yvgO 3275843 .. 3275862 + -10.7  -5.68039   CTTAATATAAAAAAA            GCTGGCG CTCTAA CGCCAGC             TTTTTTTCTGCATTT 100 36
        iolW 3292958 .. 3292979 +   -13  -4.87291   AGCACTAAAACAAAA           GCCTCCCC AAATAA GGGGAGGC            TTTTTCATTAGAATG 100 33
GII90_RS17070 3303798 .. 3303814 +  -3.5  -5.59655   CATAGGAATAGAAAA              CGCTTGG CTT CCTTGCG              TTTTTTGTTACTTTA  79 36
        rghR NONE
GII90_RS17085 NONE
        catR 3305496 .. 3305527 +  -3.7  -5.79595   GACTAATTGCTAAAA      TGGTTCTGATCTC AAAGAC GAGAAAAGAACCG       TTTTTTATTTTCCAG  90 35
GII90_RS17095 3307322 .. 3307340 + -14.6   -5.1764   TTTAAAGAGAAAAAA             GAGGCTGG ACT CCAGCCTC             TTTTTCTATTCTATG 100 36
GII90_RS17120 3311616 .. 3311639 +  -7.6  -5.09225   CCGAAGCCGTAAAAA          GTTCCCA-AAT TCA ATTCTGGGAAC          TTTTTTAAGTCCAAT  93 29
        sdpA NONE
        sdpB NONE
        sdpC 3313947 .. 3313974 + -18.6  -4.59773   ATCCATTATAATTGA        GTGTCTTGCGGA TTGC TCCGCAAGACAC         TTTTTCAACGTGAAC 100 40
        opcR 3319352 .. 3319377 + -13.4  -4.68593   CGAAAACAAAAGAAT         GCAGCTCTCT AAAATA AGAGAGCTGC          TTTTTGCATCATGAA 100 9
GII90_RS17180 3320760 .. 3320772 +  -3.5  -3.15699   AGGATTTTGGGGATG                TATTT GAG AAATA                TATTAATAACTAGAT  47 0
GII90_RS17185 3321614 .. 3321653 +   -21  -3.06831   GTTATATGCTCTTTT  AAAAACAACCCCATCACC TGCT GGTGATGGGGTTGTTTTA   TTGAATAGACGTTAA 100 24
GII90_RS17195 3324069 .. 3324091 + -10.5  -4.21997   GAAAGCATAAAAAAG           CCGCCGAGA GAAAA TCCCGGCGG           TCTTTTTATTACTTG  90 39
        araR 3334309 .. 3334337 +    -9  -5.65177   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTATAGCTGT 100 31
GII90_RS17250 3337421 .. 3337446 + -19.1  -4.60258   GCACAATAATAAAAA         CCCTCTTGCCG GATG CGGCAAGAGGG          TTTCTTATTTACTGA 100 32
        rsbQ 3347915 .. 3347926 +  -5.8  -3.05384   GGAACGAAAGGGATA                GAGG TGAC CCTC                 TTAGATGGACAAACA  56 45
        rsbP 3349148 .. 3349185 + -11.5  -5.95539   TGTAAAATAAAATGA   TCCATGAGACATAACAA TGAT TTGTTACATCTCATGGA    TTTTTTTGTTTCAGC 100 31
GII90_RS17345 3360023 .. 3360041 + -10.3  -5.05113   GATTCCTTAAAAAAA             TCCTCCC GTCTA GGGAGGA             TTTTATTTATATCGC 100 31
GII90_RS17355 3361653 .. 3361679 + -11.7  -4.62203   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG  95 27
        slrR NONE
        pnbA NONE
GII90_RS17445 3379827 .. 3379858 + -20.4  -5.28414   TCAGCAAAAAGAAAA      CCCGGAAAAGAGAA GTAA TTCTCTTTTCCGGG       TTTTTATGTTTATTA 100 8
        sacB 3384985 .. 3385023 + -14.2  -4.31433   TAACAAATAAAAACG   CAAAAGAAAATGCCGATA TCC TATTGGCATTTTCTTTTA   TTTCTTATCAACATA 100 31
        levB 3386607 .. 3386630 +   -16   -5.7946   ATTCATGAATAAAAA          CAGGGGCGGC GCAG GCTGCCCCTG           TTTTTTTATTAGGAG 100 29
GII90_RS17480 NONE
GII90_RS17485 NONE
GII90_RS17490 NONE
GII90_RS17495 3389883 .. 3389908 + -11.9  -4.46212   ATTGCCCCATCATTT         TGCTGCATGTC ACAA GACCTGCAGCA          TTTTCTGCTGCCGCG 100 219
        cotR 3393547 .. 3393557 +  -2.6  -3.53031   CGTCAGCACAACTAA                 TTAT ACG ATAA                 TTCCTTTCAAATAAC  48 422
        clpP 3394382 .. 3394407 + -13.4  -5.72207   AAAGTAATAACACAA         CCTGCAAGAG CTGCGT CTCTTGCAGG          TTTTTTTCATTTCAA 100 34
GII90_RS17575 3407503 .. 3407519 + -11.5  -5.45726   AGCATGCATAAAAAA              GCGGCCG CGA TGGCCGC              TTTTTTTAACCTGTG 100 30
GII90_RS17590 3411098 .. 3411119 + -14.5  -3.93782   TCAATAAATCAAAAA           TCCGGTCTG ATAA CAGACCGGA            TTTCATATTACATAC 100 34
GII90_RS17615 3416044 .. 3416064 + -11.2  -4.19238   TGTTCATAAGAAAAA            GCTTGCAG ATAAC CTGCAAGC            TTTTCACGTTACAAA  90 32
GII90_RS17725 3438026 .. 3438036 +  -3.2  -4.98255   AATTGTCTTTACTTT                 CAGG CTG TCTG                 TTTTTATGATTAAAG  70 142
GII90_RS17730 3438823 .. 3438846 + -12.5   -4.7889   ATTTTAACAAAAAAA          GTCCGCTGA TGTTAT TCAGCGGAC           TTTTTCAATCTTTCT 100 34
        nagA NONE
        nagB NONE
        nagR 3445541 .. 3445553 +  -3.4  -2.87501   ACCGTTATACATTTG                TCCA CTATA TGGA                TCGTCTTTCATAAAA  44 0
GII90_RS17780 3450099 .. 3450120 + -10.1  -2.82407   ATATATGTAAAAAGA           GTCTCACCC GCAT GGGAGAGAC            CTTTGGAATTCTATT  75 31
        pchR NONE
GII90_RS17800 3454285 .. 3454302 +  -9.1  -6.32976   ACCACATGTAAAAAA             GCTGCCT TTGC GGGCAGC              TTTTTTTATTTTTTT 100 30
GII90_RS17825 3456836 .. 3456854 +  -5.4  -2.75891   CAATATCTTGCCTTT             TTTGTTTT GAA AAAACAAG             TGATTCCCTGGCTGT  52 94
GII90_RS17850 3465852 .. 3465891 +  -6.4  -3.16564   CGTCCCCCTCTTTCT  TATACAAGCGGGGCGGGT GTAT ACTTGTCCTGCCAGTATA   TTCGTGAGGTGAAAC  61 43
GII90_RS17855 NONE
GII90_RS17860 3467850 .. 3467889 + -15.7  -4.46212   CTCAGCGTAACACAA  AACAGCCCGGCATCGCA TCATCC TGCGGTGCCGGGCTGCC   TTTTATGATCCCGAA 100 31
GII90_RS18015 NONE
        tagV 3496131 .. 3496157 + -15.2  -4.56597   CATCCTATTAAAAAA         TGCCCGGTCCTT TTA GAGGATCGGGCA         TTTTTGCGCAGAAAA 100 30
        lytR 3511781 .. 3511807 + -13.8  -5.65927   AAAGTAAAACAAAAA         GAAGCTTCGCAC AAT GTGCAAAGCTTC         TTTTTTATTTGCCTG 100 34
        galU 3514086 .. 3514111 +   -12  -5.95539   AAATCTAAACAAAAA         GGCTATTGGA CATTCA TCCAATAGCC          TTTTTTTATTTCAAC 100 33
GII90_RS18100 3514622 .. 3514642 +  -2.6   -2.6732   ACCTGCCATAATACA            CCAAAATA ATTGA TTTTTTGG            ATCTTTCGGTTAAAG  41 17
GII90_RS18130 3521104 .. 3521129 +   -12  -5.95539   AAATCTAAACAAAAA         GGCTATTGGA CATTCA TCCAATAGCC          TTTTTTTATTTCAAC 100 33
        tagA NONE
        tagB 3530895 .. 3530923 +  -6.9  -5.48063   AATAAGCTAAATGAT       GA-CACTTGTTC AAAACA GAACAAGTGTTC        TTTTTTCTATTGAAT 100 31
GII90_RS18170 3532346 .. 3532376 +   -20  -3.65426   GGTGTGATAATCAAA       TAGGCTGTAGCTAT TTA ATAGCTACAGCCTA       TTTGCAACTTTCTAA 100 34
       gerBA NONE
       gerBB NONE
       gerBC 3540078 .. 3540099 +   -13  -5.47159   AGTAAGCAATCAAAA           GGGTGCGC ATGATC GCGCACCC            TTTTTTATGTTCCGA 100 36
        tagT 3542783 .. 3542806 + -18.2  -4.32903   TAGGTGTATAATGAA          CGGGATGGCG ATTA CGCCATCCCG           TTTTACATATTTCCT 100 30
GII90_RS18210 3543801 .. 3543819 +  -9.6  -5.62288   TATGCATAAAGAAAA             GACTCCAG AGA TTGGAGTC             TTTTTCTTTTATTGC 100 32
GII90_RS18240 NONE
        rbsK NONE
        rbsD 3551213 .. 3551224 +  -5.8  -3.14587   ATATGCCAACTGCAT                CCTG CAGG CAGG                 TGTACTTTTCTAGAA  58 1
        rbsC NONE
        rbsB NONE
GII90_RS18270 3555252 .. 3555287 + -17.8  -3.46205   ACATGACAAAATAAC    TGAGAGGGATTCCGCA TAAA TGCGGAATCCCTTTTA     TTATGAATTGATTTG 100 27
GII90_RS18275 3555708 .. 3555739 + -11.7  -4.07568   GGATTTTTAAACAAA      TACAGCCCTG-CCG TATGT TGGACAGGGCTGTA      TTTTAAACAAAAGGC  91 31
        alsR 3559964 .. 3559988 +  -2.2  -2.86023   AACTAAAGAGAGTGA          TGCAGGTA CATGAACAA TACTTGCA          ATCTCTTTTTTCTTT  41 13
GII90_RS18300 3561535 .. 3561560 +  -6.9  -4.54047   GTATGAAACGAAAAA         CTGCCTTCT GCTTTTCA AGAGGGCAG          TTTTGTATACACTAG  81 45
        cotG 3565417 .. 3565445 +    -6  -5.95539   TTTTCATTGTTTCAA       TAGGCTGCCG-GC GGAG GTACGGAAGCCTA        TTTTTTTATTTGCCC  93 47
GII90_RS18325 3566280 .. 3566307 + -14.2  -4.39002   AAATATCAAAAAAAA        GAACACCCAGAG CAAG CTCGGGGTGTTC         TTTTATGAAACGTTT 100 119
GII90_RS18330 3567005 .. 3567021 +  -5.8  -3.50393   GCCGTCTGGGTCTGC             GGCTGGC CTTC GCC-GCC              TTGTGTGCCGTACAG  57 331
        chrS NONE
        chrB NONE
        chrA 3570118 .. 3570133 +    -9  -5.79595   TATTTATAGAAAAAA              GCACCT GGAC AGGTGC               TTTTTTATTTTAGCC 100 32
GII90_RS18365 3572315 .. 3572330 +  -6.8  -2.98072   AGAAAAAAAGCCGCA              TGGGTG GCAA CGCCCA               TATGATTGTAATGCA  56 435
GII90_RS18430 NONE
GII90_RS18435 3585802 .. 3585822 + -15.5  -5.17576   ATCATGACTAAAAAA            GCTGGCTCT AAA AGAGCCAGC            TTTTTTCCGTTCATA 100 40
GII90_RS18460 3589244 .. 3589278 + -18.8  -3.33483   AGATATGTTCTGCAT     GAAAAAAGCTGCCGTT TTG AACGGCAGCTTTTCTC     TTCGTGCTTTCACTC 100 107
GII90_RS18475 3590812 .. 3590832 +  -9.7   -5.4505   ATTGAGATAAAAAAA            GACGCCGTT TCT AACGGCATC            TTTTTTATTCCGGCG 100 47
        rapD 3593386 .. 3593396 +  -2.4  -3.59979   CGTTCTCATCAAGTA                 CGGG ATA CCCA                 TTTCCAGTGACGAGC  49 428
GII90_RS18520 NONE
GII90_RS18525 3598255 .. 3598278 + -18.2  -5.15969   CAGAATAACTTGTCA          GACTGCCGGG AAAT CCCGGCAGTC           TTTTTTCCATTAAAA 100 33
         amt NONE
GII90_RS18560 3605946 .. 3605968 + -12.8  -5.60993   CTTTAATATCGGTAC           GAGATTCGGA CAC TCCGGATCTC           TTTTTTTGTGCACAG 100 35
GII90_RS18565 3606710 .. 3606737 +  -9.2  -4.05181   CTAAGAAAGACAAAA        GCCGGC-GTCT GAAATCA AGACAGCCGGC        TTTAATATTTCTCAT  85 37
GII90_RS18580 NONE
GII90_RS18585 3609287 .. 3609317 +  -9.1  -4.07285   GATGAGACAGGACAG      GGCATGAGTTCCAT ATAA ACGGAAC-CATGCC       TATTTTATTTGACTA  81 42
GII90_RS18590 3609690 .. 3609714 +  -2.2  -5.25805   TCGCTCTTTTTGATC         CTGTTCAGCAT ATAG ATG-TGAACCG          TTTTTTGGATTTGTT  74 155
         cls 3611693 .. 3611715 + -17.7  -4.32034   TATAAGATGCGTAAA           CCCCCGGCC TTTAC GGCCGGGGG           TTTTCCTGATGGTCA 100 36
GII90_RS18610 3613014 .. 3613031 + -12.7  -5.64873   TATTAATGAGAAAAA             CCCGGAG CTGG CTCCGGG              TTTTTTATTATTCCG 100 35
GII90_RS18715 3628613 .. 3628633 +  -9.8  -5.72254   GCGTTCATAAAAAAA            TCCTTCTC ATAAA GAGAAGGA            TTTTTTCTTATTTCC 100 31
GII90_RS18810 3643416 .. 3643434 + -13.2   -5.4505   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTTATTAAAACA 100 16
GII90_RS18830 NONE
        racA 3646924 .. 3646940 + -12.3   -5.7946   AACCTAAAGCAAAAA              GCTCCCT TAA AGGGAGC              TTTTTTTGTTACGCA 100 34
GII90_RS18895 3658228 .. 3658257 +  -5.8  -5.57396   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAAC-GGCAAGTC       TTTTTTATTACTTCT  91 70
         cls NONE
        uvsE NONE
GII90_RS18930 3666766 .. 3666785 + -10.8   -5.2291   CTTACATACAAAAAA            GGATAGAC ATCT GTCTATCC             TTTTTCTTATGCTCT 100 41
GII90_RS18980 3679058 .. 3679077 + -10.8  -5.47821   CACAAGGTAAAAAAA            CAAGGACA CCGC TGTCCTTG             TTTTTTTCAGTCAAT 100 31
GII90_RS19005 NONE
        sboX NONE
        albA NONE
        albB NONE
GII90_RS19025 NONE
        albD NONE
GII90_RS19035 NONE
GII90_RS19040 NONE
        albG 3691003 .. 3691015 +  -6.3  -3.86897   CTGGGAAATTCAAAT                GTATC TAT GATAC                TTTCTACCAACTGCC  66 461
        rapF NONE
        phrF 3694822 .. 3694838 + -10.8  -5.15634   CGAGGAATGATTTAA              CCGCCG TCCAT CGGCGG              TTTTTTCGTCCCCTC 100 26
GII90_RS19075 3695399 .. 3695419 + -14.1  -4.14764   CTGGGAATAAAAAAA            CATCCAGAC ATC GTCTGGATG            TTTACTTATTTCACA 100 31
GII90_RS19090 3699469 .. 3699495 +   -13  -3.33762   CGACATCATTGAAAA         TAACCCGGCTCC TCG GAGGCCGGGTTA         TTCGTATGGTTCCTT  93 29
GII90_RS19105 3701257 .. 3701277 +  -9.6  -4.79955   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTATTATCCCTAT 100 36
        rsfA 3709796 .. 3709821 + -12.7  -4.13014   AATGACATAGAAAAA         TCCCAAAACGG GCAG CTGTTTTGGGA          TTTTCGCCATGTGCA  95 36
GII90_RS19170 3714939 .. 3714960 +   -13  -4.78752   TATGTATAATATCCC           CTCCCGCC CTATCC GGCGGGAG            TTTTTCAATTCTCCT 100 32
        bacG 3715848 .. 3715869 + -14.5  -4.35483   AAAAGCATATAAAAA           CATCCCGCT TTTT AGCGGGATG            TTTCTTGTAATGACC 100 29
        gerQ 3741566 .. 3741593 + -12.2  -5.72622   CAAGATAAGAAAAAA        GCCAATCACTCAT ATG ATGAG-GATTGGC        TTTTTTGTTTATAGA 100 33
GII90_RS19315 3745237 .. 3745253 +  -9.4  -4.60889   TACTCAAATAAAAAA              GCGCAG ATCAC CTGCGC              TTTTTACAAATCCTT  91 30
GII90_RS19345 3749357 .. 3749381 + -13.6  -4.65895   CAATCATAAAAAAAG          GGGCTGCCTT ACAGA GAGGCAGCCC          TTTTTAAATCACCGA 100 32
GII90_RS19365 3754143 .. 3754161 +  -8.8  -3.00046   CTCTTTTACATGTCC             GATCGCCC ACA GGCCGATC             TCATATTCTTTTTTA  66 493
         vpr 3757843 .. 3757863 + -18.3  -4.60041   GTTGAATAAGAAAAA            GCCCTGCCG ATT CGGCAGGGC            TTTTTAAAGATCAGT 100 32
        ywcE 3761858 .. 3761877 + -12.2  -5.55695   GAAGACAGCAAAAAA            CCCTCTTC CACT GAAGAGGG             TTTTTTGTATTATTC 100 39
GII90_RS19425 3766604 .. 3766629 + -15.5  -4.67048   GGATAAAAGCAGCAG         CACCCGAAGCG TCAG CGCTTTGGGTG          TTTGTTTTGCCATAA 100 35
        slrA 3771186 .. 3771200 +  -8.6  -3.03243   CTACGACAGACAGCC               GGTGAT GCG ATCACC               TCTTGGCACATGCAT  70 162
GII90_RS19455 3771792 .. 3771809 +  -4.1  -4.02946   GATCTGAAGGGTGAA             CAGACAT GAAT ATGACTG              CTTTTTTATTATTTT  58 17
GII90_RS19460 3773344 .. 3773361 +    -7  -4.97312   ACAGGAATAAAAAAA             GCTCTC TTTATC GAGAGC              TTTTTCCTTACTTTT  85 31
GII90_RS19500 NONE
GII90_RS19505 3781831 .. 3781848 +  -7.7   -6.0427   CATTTATGTAAAAAA             CTGTCCT CTCG AGGGCAG              TTTTTTTTATGTGCT 100 30
GII90_RS19510 NONE
GII90_RS19515 3783367 .. 3783387 +  -9.7  -5.10004   TCTACATAAAAAAAA            GCTGCCC CTGAACA GGGCAGC            TTTTTCATTATTTTT 100 32
        glxA 3785094 .. 3785119 + -11.3   -5.4251   AGCGGTAAAAATAAA         GAACGTACATT TTGT GATGTACGTTC          TTTTTTATCTATACC 100 33
         epr 3789385 .. 3789415 + -12.1  -5.68023   AAAAGTAACCAAAAA       CCTTTAAGATTTG CATTC CAAGTCTTAAAGG       TTTTTTTCATTCTAA 100 33
        sacX NONE
GII90_RS19550 3792094 .. 3792116 + -10.7  -5.75478   GAGACAAACAAAAAA           CGCTTTTGA TCATC TCAAAAGCG           TTTTTTTATCTGATT 100 39
        ywaE 3794672 .. 3794699 +  -9.9  -5.59879   GGTACCGCGTGCATT        GAGCCACGTCCC TTATT GGGATG-GGCTC        TTTTTTGTGTTTGTA 100 217
GII90_RS19570 3795986 .. 3796011 +  -7.7  -5.42862   TCTGATATTCCGAAA         CGCTTATGA CCCTTCAT TCATAAGCG          TTTTTTTGCAGGTAT 100 41
        ywaD 3797499 .. 3797518 + -13.6  -5.16237   TATCAAATAAAAAAA            GACGGCAC TTGG GTGCCGTC             TTTTTTAATCCACTT 100 31
        dltX NONE
        dltA NONE
        dltB NONE
        dltC NONE
        dltD NONE
GII90_RS19620 3804809 .. 3804831 + -12.1  -5.22312   CGAGCAAATGAACAC           GCAGGAGAA TTAAT TTCTCCTGC           TTTTTTCATATGAAT 100 13
GII90_RS19625 3806061 .. 3806081 + -11.1  -5.47399   GCAAGTAAGAAAAAA            GCCGGCC CATTACA GGCCGGC            TTTTTTTACGCTTCA 100 33
GII90_RS19665 3814222 .. 3814243 + -10.9  -6.23317   ATTAACAACAGCGAA           CAGGGCTTT TTTA GAAGCCCTG            TTTTTTTATTTTTCT 100 36
GII90_RS19670 NONE
GII90_RS19705 3819989 .. 3820011 + -12.1  -5.37345   GGGGTATCAAGAAAA           GCTGTCTTC TCTCT GAAGACAGC           TTTTTTATCATTCAA 100 10
        cimH 3828686 .. 3828715 + -10.9   -5.1287   TATTGATCCCCGCAA       GCAAGTTC-TTCGT CAA ACGAAAGAGCTTGC       TTTTTTGCATGTCCA 100 35
GII90_RS19740 NONE
GII90_RS19745 3830733 .. 3830752 + -12.1  -6.01187   TGTGGCGGCGGAGGG            GGCGGCG ATTAAA CGCCGCC             TTTTTTTATTTCATT 100 14
GII90_RS19765 3835466 .. 3835490 + -10.1   -5.5454   TTCTAAATGAAAAAA          TCCCTCTGT TTCAAGT ACAGAGGGA          TTTTTCTTTATTTAG 100 35
GII90_RS19775 3837452 .. 3837477 + -17.7  -3.90744   TCAAATAACAGCTAA         CAAGGGTGCCT GTTT AGGCACCCTTG          TTCTTTAAAAAAGGC 100 33
GII90_RS19790 3840175 .. 3840190 +    -4  -2.86291   TATAGAGCTGAAAAA              TCAATC TGCC GGTTGA               CGTTTTTCTTTCCTA  46 36
GII90_RS19795 NONE
        yxjM NONE
        yxjL NONE
        pepT 3843887 .. 3843908 + -11.6  -5.36441   AGCATAACGCCAAAA           GCCAGTCC AAAAAA GGACTGGC            TTTTTTGTGTGAAAA 100 34
GII90_RS19815 3844684 .. 3844703 +  -8.6  -4.26634   TATTTCAAACGAAAA            GGCTGC-TG AAT CACGCAGCC            TTTTAAAATTGTTTT  83 46
GII90_RS19820 3845471 .. 3845495 +   -13   -4.7078   GATTTGATCGTTCAA          GCTCTTCCTT ACACA AAGGAAGAGC          TTTTTACATGCTTAA 100 216
GII90_RS19825 3846860 .. 3846884 +   -13  -5.56264   GAGATTGTCACGCAA          GCTCTTCCTT ATCCA AAGGAAGAGC          TTTTTTATATTTGAA 100 217
GII90_RS19830 3848071 .. 3848100 +    -8  -5.42131   AAGCAAAGAAAAAAA       CACACTTGATTCC CTAGC GGAG-CAAGTGTG       TTTTTTATGTCATTG  95 39
GII90_RS19860 3854524 .. 3854551 + -14.3   -4.5774   TGTGGTAGAAACATT        GAGCCATATCC CTTTTC GGATATGGCTC         TTTTCATTATTGATA 100 33
        citN 3859374 .. 3859398 + -11.5  -3.71917   TCATTACAATCATAA          GAGCCTGCT ATATTGC AGCAGGCTC          TTTCACATTTGGCAT  91 144
GII90_RS19900 3863524 .. 3863553 + -10.1  -3.37654   CAGCCAGCAGCAAAA       TGACCTGC-CCC TTTAACT GGGAGCAGGTCA       TTCATCATTTATTCG  78 10
        hutP 3889535 .. 3889573 + -10.5  -4.96848   GATCTTAGACGATAG  GGGGCTATGC-GTGAA AACAGAAG TTCACAGCATAGCTCC   TTTTTGTATGGGCGC 100 52
        hutH NONE
        hutU NONE
        hutI NONE
GII90_RS20050 NONE
GII90_RS20055 3896540 .. 3896574 +    -5  -5.60689   ACATCCTATAATTAA     AAAAGCACACCCCG CTCAGCA TGGGATGTGCTTTA     TTTTTTATTCTGTAA  88 30
       cotNE 3913699 .. 3913714 +  -2.6  -4.78077   GGAAAATAATTGTAG              TTCC-TC TTT GACGGAA              TTTCTTTTCATTCAA  65 192
GII90_RS20155 3914144 .. 3914168 + -10.1  -5.85737   AGTAACATATAAAAA          GCTCAACAC AATGCGA GTGTTGAGC          TTTTTTTCTTACTGT 100 36
GII90_RS20165 3915724 .. 3915747 + -10.3  -5.37345   TAAAAAATAAAAAAA          CGGCACAGT CATGAC GCTGTGCCG           TTTTTTATGATTCAC 100 31
        iolR NONE
GII90_RS20250 3934119 .. 3934143 + -18.7    -5.626   CGCATAAGAAGAAAA          CAGCCTTCTCC AAT GGAGAAGGCTG          TTTTTTTGTGCGATA 100 34
GII90_RS20255 NONE
GII90_RS20260 3935351 .. 3935371 +  -7.6   -5.5943   AATGTCTTAATCAAA            CCTTACTC CGCGC GGGTAAGG            TTTTTTTAATGGTTT 100 42
GII90_RS20265 3936963 .. 3936989 + -15.3  -5.19879   TACATTATAAAAAAA         GGAATCGTCTC CTTAT GAGACGATTCC         TTTTTCTGTTTACAC 100 31
GII90_RS20280 3940237 .. 3940254 + -11.3  -5.28983   GAAGAAACGAAATAA             GAGAGGG AGCC CCCTCTC              TTTTTGTCTTTTAAA 100 26
GII90_RS20290 3942902 .. 3942923 + -10.9  -4.79352   ATCGCATGATCAAAA           GGCGCTTCCT TAG AGGA-GCGCC           TTTTATTGTAACTCC 100 40
GII90_RS20305 NONE
GII90_RS20310 NONE
GII90_RS20315 NONE
        asnB NONE
GII90_RS20325 3949837 .. 3949865 + -14.8  -2.85947   TTTGTATCACAGTAA        GAAGACCTTCTT ATTAA AAGAAGGTCTTC        TGCTATTCTATTCAG 100 45
GII90_RS20340 3952356 .. 3952391 +   -12  -4.88918   TGTATAAATAATAGA    AAAAAGTCTAGACGCC AATA GGCATCTAGACTTTTG     TTTTCTTTGCAATAG 100 30
GII90_RS20360 3956600 .. 3956625 +  -3.4  -4.66953   TGACCATAAGAAAAA        CCCATGCTGTTC CAGC GAAC--CATGGG         TTTTTCAGCTGTTAA  64 45
GII90_RS20370 NONE
GII90_RS20375 3958370 .. 3958392 + -10.6  -4.98531   TATTTAACAAAGAAA           GACTGCCC CGGGGGA GGGCAGTC           TTTTTCGTTTAAGAA 100 34
        gntR NONE
        gntK 3963154 .. 3963167 +  -6.7  -2.54687   TGACATGAAGGGGAG               GGCAT TACC ATGCC                GTTAATCATCGTTGC  57 45
        gntP NONE
         gnd 3965952 .. 3965976 +  -9.4   -5.9218   AACCTGTATTAAAAA         CACGG-TCAGT TTCA ACTGAACCGTG          TTTTTTTCTTCTATC 100 39
        ahpC NONE
        ahpF 3968518 .. 3968550 + -15.7  -5.69262   AACTAATATAAGAAA      TCCGCTATATTGCCA GAT TGGCAGGATAGCGGA      TTTTTCTTTTTCTAC 100 35
GII90_RS20435 NONE
GII90_RS20440 3971643 .. 3971663 + -12.7  -2.75825   AGGTGCACATAAAAA            GCTACTTCA TTG TGAAGTAGC            TCCCTTTATTAAAGG  86 127
GII90_RS20470 3977991 .. 3978011 +  -8.3  -3.04242   TAAAACAGGTTAAAA            GGAAGTTCT ATA AGAACTCCC            TAGTTTAATATTATT  67 520
GII90_RS20500 3983218 .. 3983241 + -13.2  -5.54338   ATTACCAGCAATAAA          GCCGG-CGTTC TGA GAACGTCCGGC          TTTTTCTTTTACTTC 100 27
        rapG NONE
GII90_RS20540 3988935 .. 3988953 + -13.8  -3.27525   TGGATAAATGAAAAA             CCCCCGCG GGA TGCGGGGG             TTCAATTTAACGAAA 100 34
        rocR 3994945 .. 3994969 + -10.7  -5.83822   TATATCCTTTTTCAA          CTGAACGGGCG TGA CCCCTGTTCAG          TTTTTTTTGCATATC 100 386
GII90_RS20640 4006669 .. 4006686 +  -9.1  -5.06103   TTTAATGAATGAAAG             CCTTCGC TGCA GCGAGGG              TTTTTTAGCGGTTAT 100 36
GII90_RS20650 NONE
GII90_RS20655 4008453 .. 4008471 +  -8.1  -5.65927   GAAATTCAGCATAAA             GCGGGGA AGATA TCTCCGC             TTTTTTCTTTGAATA 100 27
GII90_RS20660 4010614 .. 4010647 + -15.5   -3.1315   TATCTCGTGGAATAA     AAAAAGAGGCTTGGA TGAA TCCAAGCCTCTTTTC      TATTAAGCTTCTTCT 100 26
        cotF 4015051 .. 4015075 + -14.4  -3.58864   AATGAAATAAAACAA          GCAGCAAAGG AGTTC CCTTTGCTGC          TATTTCTGCTGATCC 100 31
GII90_RS20695 4016574 .. 4016631 + -18.1  -3.50047   TGTCTTAACAGACGC AATGGCTGAATAAGCAAAAAGCATCCCG CGT CGGGATGCTTTTT-CTTATTCACCCAGC TTCTCAATTTGTCCC 100 13
GII90_RS20710 4018819 .. 4018838 + -13.6  -2.66272   AGAACATGAAAAAGA            GAGCTGCC AGTT GGCAGCTC             TCCCTTTACATCAAA  93 39
GII90_RS20725 4021059 .. 4021083 +  -8.8  -5.50774   CGAAAAAATTTAGAA          TGATAATCTT TTTAT AAGATTATCA          TTTTTATTTATTCTA 100 80
GII90_RS20730 NONE
GII90_RS20735 NONE
GII90_RS20740 NONE
GII90_RS20745 4024309 .. 4024330 +  -8.8  -4.87665   TTAAACTGGAATAAA           GAGTGCTT GCTGAA AAGCACTC            TTTTTCTGCATCGAA 100 356
GII90_RS20765 4026588 .. 4026604 +  -5.1   -5.1861   ATTGGAAATAAAAAA              GGACC CGCTAAC GGTCC              TTTTTTACTGATCAA  79 30
GII90_RS20775 NONE
GII90_RS20780 4029382 .. 4029392 +    -4  -3.30443   TGTCACTTATGAGCA                 TGAA CGG TTCA                 TTGGTATACTAATCA  50 55
GII90_RS20785 4029992 .. 4030007 +  -4.6  -5.93252   CCGCAAAAGCCTCTG              CGGCAG GCAG CTGCCA               TTTTTTCTTTTTGGG  91 103
GII90_RS20800 NONE
GII90_RS20805 4032508 .. 4032526 +  -4.6  -3.35679   TATCAAAGAATAGAA             GAGGTT ATTAAGA AACCTC             TTCTCGATCCAAAAA  53 15
GII90_RS20815 NONE
GII90_RS20820 4034673 .. 4034699 + -13.1  -3.31269   TCTTATTGAACTAAA         GGGGAATCCAT AAATA ATGGGTTCCCC         TTAATATACTATGGA  95 71
GII90_RS20840 4037152 .. 4037180 +  -2.4  -6.01187   ATTCATTTTCTAAAA       CCTGTAATC-CGT AACC ACGCGGTAGCAGG        TTTTTTTATTTGCTT  87 79
GII90_RS20845 NONE
GII90_RS20850 4038595 .. 4038605 +  -2.6  -3.13788   AGAAATAGGGAGTAT                 TTTT GAG AAAA                 TGTGTTAAGTTAAAT  45 41
GII90_RS20855 4040703 .. 4040736 +  -8.9  -5.10877   GCGATCCACACATTA     ATAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTAC      TTTTTGATTTCTTAT 100 8
GII90_RS20865 4043203 .. 4043225 + -13.5  -2.92246   ACAGATTTAAAAAAG           TCAGTGCGG ATCTG CCGCACTGA           TCTCATTACAATTGC  90 31
        yyaC 4052979 .. 4052999 +  -5.5  -5.42514   CATATAAAATAAAAA            CCATCTT CGTTTGA AAGATGG            TTTTTTCATTTATGA  86 34
GII90_RS20940 4055325 .. 4055347 + -13.5  -4.01088   TTAAAAATATAAAAA           GCTCTCCTG CTTTT CAGGAGAGC           TTCTATTTTGGTATG 100 51
        rpmH 4062685 .. 4062708 -  -8.9  -5.11033   CATAACGTGAAAAAA          GACCACTGA CATTAT TCAGTGGCC           TAAGCTGATAATACT 100 25
        rnpA 4062102 .. 4062113 -    -3  -2.75844   TCTTTTATTGCAAAG                CATA CTTG TATG                 TATTTTAGCATCTTT  42 118
        yidC NONE
GII90_RS20965 4060618 .. 4060645 - -11.4  -5.71712   TCGGATACAAAAAAA        CCGAAATCCAAT TTTT ATCGGACTTCGG         TTTTATGCTATCTTT 100 33
        mnmE NONE
        mnmG NONE
        rsmG NONE
         noc 4055325 .. 4055347 - -13.5  -5.36364   TTAAAAATATAAAAA           GCTCTCCTG CTTTT CAGGAGAGC           TTCTATTTTGGTATG 100 28
         soj NONE
       spo0J 4052979 .. 4052999 -  -6.2  -5.58522   CATATAAAATAAAAA            CCATCTTC GTTTG AAAGATGG            TTTTTTCATTTATGA  91 35
GII90_RS20920 NONE
GII90_RS20915 NONE
GII90_RS20910 4048479 .. 4048511 -  -7.1  -4.13945   AGGTTCACTGGAAAA      GACAAGCTGACAA AAAAGCA TTTTCAGCTTGCC      AATCCCTTTGATTAT  73 37
        ychF 4047236 .. 4047246 -  -2.6  -3.27476   ATGGGCAAGGAGCAA                 TAAT TCT ATTA                 CTCACAATTTTATAT  45 75
GII90_RS20900 NONE
         ssb 4046346 .. 4046360 -  -4.2  -2.69433   TAATCACATTAGAAT               GGAAGA TCA TCATCC               GAGATGTCAATCGGT  47 4
        rpsR 4046017 .. 4046042 - -14.1  -5.24129   CCCCCCTATAAAAAA         GAGCAAGAACC CGAA GGTCCTTGCTC          TTTACATATCAGCTT 100 39
         xth 4045201 .. 4045225 -  -5.8  -5.71712   TTTCATATAAAAAAA          GCAGTAAG TGTAAAATC CTTACTGC          TATCTCATCATATAT  91 33
        ccpB 4044223 .. 4044236 -  -3.9  -2.61602   TGAAGTTATAAGGTA               TGAAA TGCA TTTCA                GTTCAAGCTTTTTTC  45 28
GII90_RS20875 NONE
GII90_RS20870 4043202 .. 4043226 -   -10  -5.15381   AACAGATTTAAAAAA          GTCAGTGCGG ATCTG CCGCACTGAT          CTCATTACAATTGCT 100 30
GII90_RS20860 4040704 .. 4040735 - -12.4  -3.32993   CGATCCACACATTAA      TAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTA       CTTTTTGATTTCTTA  89 7
GII90_RS20835 NONE
      tet(L) 4035089 .. 4035123 -  -6.6  -5.26316   TCATTTTACAAAAAA     GGATCAACCTTG AATTACTTTCA CAAGATTGATCC     TTTCACTCATTTAGC  91 36
        satA 4032505 .. 4032529 -  -8.7  -3.59252   TCTTATCAAAGAATA          GAAGAGGTT ATTAAGA AACCTCTTC          TCGATCCAAAAAACG  75 109
GII90_RS20795 4030760 .. 4030772 -  -4.1  -2.94888   AATTCACGCAAACCA                TCTCC TGT GGAAA                TTTTTTGATAGTTTT  47 151
GII90_RS20790 4029923 .. 4029945 -  -9.9  -4.81359   AATTTAAATAGAAAA           GGAGTGAGC CTGAC ACTCACTCC           TTTTGCTCATGAATC 100 169
GII90_RS20770 4026588 .. 4026604 -  -5.1  -5.64421   ATTGGAAATAAAAAA              GGACC CGCTAAC GGTCC              TTTTTTACTGATCAA  88 37
GII90_RS20760 NONE
GII90_RS20755 4024309 .. 4024330 -  -8.8  -4.23104   TTAAACTGGAATAAA           GAGTGCTT GCTGAA AAGCACTC            TTTTTCTGCATCGAA  83 48
GII90_RS20715 4018817 .. 4018840 - -16.8   -4.9181   ATAGAACATGAAAAA          GAGAGCTGCC AGTT GGCAGCTCTC           CCTTTACATCAAAGA 100 34
GII90_RS20705 NONE
GII90_RS20700 4016576 .. 4016629 - -25.1  -3.19175   TCTTAACAGACGCAA TGGCTGAATAAGCAAAAAGCATCCCG CGT CGGGATGCTTTTT-CTTATTCACCCA GCTTCTCAATTTGTC 100 15
        hypR 4015048 .. 4015078 -    -9  -4.99947   TTCAATGAAATAAAA       CAAGCAGCAAAGGA GTT CCCTTTGCTGCTAT       TTCTGCTGATCCTTC 100 22
GII90_RS20680 4014238 .. 4014259 -  -8.1  -4.80167   CATGAAAAAGGAAAA           GACATTCTT TGAA AAGAATGCC            CATCACAATTAATGT  95 34
GII90_RS20675 NONE
        gdpP NONE
        rplI 4010619 .. 4010642 - -15.4   -5.7946   CGTGGAATAAAAAAA          GAGGCTTGGA TGAA TCCAAGCCTC           TTTTCTATTAAGCTT 100 33
GII90_RS20645 4006669 .. 4006686 -  -6.9  -2.99727   TTTAATGAATGAAAG             CCTTCGC TGCA GCGAGGG              TTTTTTAGCGGTTAT  62 45
        dnaB 4004902 .. 4004922 - -15.5  -5.63103   TTCGAATGAAAAAAA            CCCCAAGAG CAG CTCTTGGGG            CTTATGCGCCGGGCG 100 27
GII90_RS20630 4004277 .. 4004287 -  -2.6  -3.38361   AAATCCGAACATTAA                 TTTA TTG TAAA                 TCTATATTCGTTCGC  46 122
        purA 4002849 .. 4002871 - -13.5  -5.63517   CTTTCAAACAAAAAA           CAAGCCCCT TAAAT AGGGGCTTG           CAGACATATTCTATT 100 40
GII90_RS20620 NONE
GII90_RS20615 4002433 .. 4002469 - -10.3  -3.27022   CGGACCTTACAGTAA   TTGCCCG-GAGAGCTG TCGTGT CAGCTCTCACAGACAA    ATAAGGAATTTAGCA  79 58
GII90_RS20610 NONE
GII90_RS20605 4002208 .. 4002229 -  -8.7  -5.79595   TCCTAAAAGAAAAAA           CGCACCTAC GATT GCAGATGCG            TTTGGTAAGTGGCTC 100 33
        walR NONE
        walK NONE
        walH NONE
        walI NONE
GII90_RS20580 3996310 .. 3996320 -  -2.4  -3.16187   TAGAAAAATTATACA                 GCGC AAA GCGG                 AGTGGCCTTCTTCGG  43 8
        htrC 3994989 .. 3995012 - -13.2  -4.34402   TTTTGCATATCAAAA          CAGCCTGGCA ACGA TGCCAGACTG           CTTTTATTAACTGCC 100 32
GII90_RS20570 3994473 .. 3994489 -  -6.6  -3.59966   ATATGTGATAGAGAA              CGTGTT AAGAA AACACG              GCCATAACATCTCGA  64 407
        rocD 3991736 .. 3991751 -  -3.9    -2.508   AAACGAAGTGAATAT              CCCGC CATGGT GCGGA               TTTATGCGTTTCGCA  45 27
GII90_RS20550 NONE
        rocF 3989137 .. 3989154 - -14.1  -3.59262   GTCGACACGCTGAAA             CCCCCGC GGGT GCGGGGG              TTTTCTTATTACAGC 100 34
GII90_RS20530 3987109 .. 3987123 -  -7.1  -4.96848   TCGTTTACAGAAAAA               GGCCT TTATC AGGCC               CTTTTCGTTAAAGCT  85 33
GII90_RS20525 NONE
GII90_RS20520 NONE
GII90_RS20515 3984781 .. 3984799 -  -4.6   -5.7946   GGTTCAACAAAAAAA             GAGACT TCACACC AGTCTC             TTCATAAACAGAGAT  91 40
GII90_RS20510 NONE
        fdhA 3983218 .. 3983241 - -13.2  -4.27441   ATTACCAGCAATAAA          GCCGG-CGTTC TGA GAACGTCCGGC          TTTTTCTTTTACTTC 100 34
GII90_RS20495 NONE
        rlmH NONE
GII90_RS20485 NONE
GII90_RS20480 NONE
GII90_RS20475 3977991 .. 3978011 - -10.5  -4.23434   TAAAACAGGTTAAAA            GGAAGTTCT ATA AGAACTCCC            TAGTTTAATATTATT  90 44
GII90_RS20465 3974918 .. 3974934 - -10.9  -3.76534   CCAACAAATGGTAAA              GGAGAGT TAG ACTCTCC              TTTGTACCCCTCTAA  88 41
GII90_RS20460 NONE
        liaK NONE
GII90_RS20450 NONE
GII90_RS20445 3971643 .. 3971663 - -12.7   -4.9725   AGGTGCACATAAAAA            GCTACTTCA TTG TGAAGTAGC            TCCCTTTATTAAAGG 100 34
GII90_RS20430 NONE
GII90_RS20425 NONE
GII90_RS20420 3968518 .. 3968550 - -13.5  -4.48583   AACTAATATAAGAAA      TCCGCTATATTGCCA GAT TGGCAGGATAGCGGA      TTTTTCTTTTTCTAC 100 93
GII90_RS20385 NONE
GII90_RS20380 3958370 .. 3958392 - -11.3  -4.69214   TATTTAACAAAGAAA           GACTGCCCC GGGGG AGGGCAGTC           TTTTTCGTTTAAGAA  95 34
GII90_RS20365 3956600 .. 3956625 -  -3.4  -5.22006   TGACCATAAGAAAAA        CCCATGCTGTTC CAGC GAAC--CATGGG         TTTTTCAGCTGTTAA  73 37
        yxaF 3954791 .. 3954809 -    -6  -3.97834   TAATTGTAGGAGAAA             GGATAACA AAA TGCTACCC             TTTTTTTCTCACCAG  65 20
        qdoI 3953591 .. 3953647 -    -3  -3.15147   TGTAATGAAGACATA GCCATCACGCTCCTTTTTTCTGTACC TTAAG GGTAGGAAAAAATGAAGCGCGGTAAC ATCGATTTAGGTGTC  45 75
GII90_RS20345 3952361 .. 3952386 - -14.1  -5.57729   AAATAATAGAAAAAA         GTCTAGACGCC AATA GGCATCTAGAC          TTTTGTTTTCTTTGC 100 20
GII90_RS20335 NONE
GII90_RS20330 3949837 .. 3949865 - -14.8  -3.29471   TTTGTATCACAGTAA        GAAGACCTTCTT ATTAA AAGAAGGTCTTC        TGCTATTCTATTCAG 100 41
GII90_RS20300 3943433 .. 3943473 -  -7.1  -5.08601   TTAGCTGAACAAAAA  TAAGAGAATTAACAACCTA TTT TATGTCATTAATCCCCTTA  TCTAGTATTTACTAG  90 37
GII90_RS20295 3942902 .. 3942923 - -10.9  -4.30844   ATCGCATGATCAAAA           GGCGCTTCCT TAG AGGA-GCGCC           TTTTATTGTAACTCC  90 28
GII90_RS20285 3940237 .. 3940254 - -11.3  -4.21086   GAAGAAACGAAATAA             GAGAGGG AGCC CCCTCTC              TTTTTGTCTTTTAAA  90 36
GII90_RS20275 3939036 .. 3939056 -  -5.4    -5.252   CATTCTCATAAAAAA            GAGAGGCT TCATC ATCCTCTC            TTTTTTTCTGTGTCA  86 16
        htpG 3936963 .. 3936989 - -15.3  -5.69473   TACATTATAAAAAAA         GGAATCGTCTC CTTAT GAGACGATTCC         TTTTTCTGTTTACAC 100 35
        mmsA 3930449 .. 3930479 -  -7.6  -2.83271   CTATTGGCAGAATGA      GTCCGAACAGCGC ACATGG ACGCCGTTCGG-C       TGTTCGTCGTTTAGT  64 36
        iolB NONE
        iolC NONE
        iolD 3926659 .. 3926669 -  -6.8  -3.01712   GCCTCCCCTCTAATA                 CTGC TTC GCAG                 ATTCCAGCTTTTTCT  60 9
        iolE NONE
        iolF NONE
        iolG NONE
GII90_RS20205 3922415 .. 3922456 - -16.8  -2.58999   GTTTTAGATATGAAG GGAGTTCGGCAGGA-A-GGC TGTC GCCATATCCCGCCGAACTCC ATGCTCAGCTTATGC 100 35
        iolI NONE
        iolJ 3920624 .. 3920638 -  -9.2    -5.626   CACCGCACAAAAAAA               CCGCCA TCT CGGCGG               TTTCTGGTCTCTTTA 100 38
        yxdJ NONE
        yxdK 3918812 .. 3918844 -  -5.7   -5.0916   CGTTCAACATAAAAA      TCCCCTTGACA TAAATCCATGT TATCAAGGGGA      AACAAAGCGGGCTAT  81 61
        yxdL NONE
        yxdM NONE
GII90_RS20170 3915724 .. 3915747 -  -9.6  -6.28401   TAAAAAATAAAAAAA          CGGCACAGTCA TGA CG-CTGTGCCG          TTTTTTATGATTCAC 100 37
GII90_RS20160 3914144 .. 3914168 - -10.1  -5.10968   AGTAACATATAAAAA          GCTCAACAC AATGCGA GTGTTGAGC          TTTTTTTCTTACTGT 100 34
GII90_RS20145 NONE
GII90_RS20140 NONE
GII90_RS20135 3911226 .. 3911246 - -14.1  -5.52347   AATAAAACGAAAAAA            TCCAGCCTT TAG AAGGCTGGA            TTTTTTATTATTTAG 100 33
        yxeI NONE
GII90_RS20125 NONE
GII90_RS20120 NONE
        snaB NONE
GII90_RS20110 NONE
GII90_RS20105 NONE
GII90_RS20100 NONE
        sndB NONE
GII90_RS20090 NONE
        eutH 3901906 .. 3901928 -  -4.8  -4.20516   TCCCGATTGAACAAA           GTTGAAACAG CTC CTGCCTCAGC           TATGGCTGGCTGAGA  65 21
GII90_RS20080 3900997 .. 3901024 -  -8.4  -4.86939   TAAGAAACTGAAAAA        CGCTCTGGGC GCGGACCT GCCCAGAGCT         TACTTCTCCCAAGTC  95 25
        deoR 3899963 .. 3899974 -  -2.2  -3.35467   GTCACAAATCATTAA                CAAG CGCC CTCG                 CGGTATGCTGGTCAA  45 0
        deoC 3899144 .. 3899164 - -11.9  -4.36914   TGTTTCCTCAGAAAA            CGGAAAGCA GTC TGCCTTCCG            TCAGCTCTTAATAGT 100 33
        nupC NONE
GII90_RS20060 3896544 .. 3896570 -  -7.3  -5.32944   CCTATAATTAAAAAA         GCACACCCC GCTCAGCAT GGGATGTGC         TTTATTTTTTATTCT  95 34
GII90_RS20025 3888579 .. 3888596 -  -5.5  -2.91582   CACTTCACTTACATA             GTCAGAC TGAT GTCTGTC              TGTTTTGCGCAGAAC  52 9
        abnB 3887009 .. 3887026 -  -7.7  -5.63504   AAGCTCATAAAAAAA             CACCTTC CCTC GAAGGCG              CTTCTCCATCTTATT 100 36
GII90_RS20015 NONE
GII90_RS20010 NONE
        yxiD NONE
        yxxD NONE
GII90_RS19995 3883286 .. 3883336 -  -9.9  -5.94214   AAGAGAATAAAAAAA CCTAAATGACACAGATTGCGAGAG TCTC CTCCTGC-ACCTGCACCATTTAGG TTTTGCCTGCTTTCG 100 250
        bglP NONE
        bglH NONE
GII90_RS19980 3879341 .. 3879354 -  -9.5  -6.23545   TCTAAATAAAAAAAA               GCGCC CAAG GGCGC                TTTTTTTACAAATCT 100 39
GII90_RS19975 3878256 .. 3878268 -  -6.2  -6.09196   CCTAAAACAAAAAAA                GGCC GCATA GGCC                TTTTTACATTTTTTA 100 38
        wapA 3871072 .. 3871111 -  -2.8  -3.64703   TCCTCCTCATTTAAA  GTTTAAGTGAGGGTAG TTGTCATC CCCCCCTCGCTTAACC   TTATTAACGCCTTCT  50 29
        wapI 3870400 .. 3870424 -   -13  -5.00884   ATTTGTTCTAAAAAA          GCTTGTATCG CTTAT CGATACAAGC          TTTATCTTCAACTGC 100 226
GII90_RS19960 NONE
GII90_RS19955 NONE
GII90_RS19950 3868915 .. 3868925 -  -2.6  -3.93819   ATGAAATGATAAGAA                 TAAA CCA TTTA                 TTAGCTATTAGTAAC  52 100
GII90_RS19945 3868473 .. 3868485 -  -4.1  -3.74381   ATCTAACGTAAAACA                CCACA CAC TATGG                CCGTTGGGATTCTCA  54 88
GII90_RS19940 NONE
GII90_RS19935 NONE
GII90_RS19930 NONE
GII90_RS19925 NONE
GII90_RS19920 NONE
GII90_RS19915 3866360 .. 3866378 -  -8.9   -3.1169   AGAAGGGGAAAATCA             GTGTGAC TTCTT GTCACAC             TTGATCACATCCCAA  71 4
GII90_RS19910 3865085 .. 3865101 -  -7.9  -4.29396   AATGATGTATTAAAA              GCCAGCG ATT CCCTGGC              GTTTTAGCTCCTGAA  78 3
        dbpA 3863524 .. 3863553 - -11.5   -4.3129   CAGCCAGCAGCAAAA       TGACCTGCCCC TTTAACTG GGAGCAGGTCA        TTCATCATTTATTCG  91 30
GII90_RS19895 NONE
        licT 3860292 .. 3860344 -  -5.8  -5.86609   TGAAAAAAATAAAAA CCTAAATTACCATCAGCACAGA-CA GAGA TGATCCGCACTCATTGCAATTTAGG TTTTGCCTGCTTTAT  93 118
        bglS 3859374 .. 3859398 - -12.2  -3.57783   TCATTACAATCATAA          GAGCCTGCTA TATTG CAGCAGGCTC          TTTCACATTTGGCAT  90 40
GII90_RS19875 3855686 .. 3855704 -  -6.8  -4.25104   TGCTCCTTATGAAAA             GTATCTTC CTT AAAGATAC             AGGAGCCGATCAAAT  73 35
GII90_RS19870 3855352 .. 3855368 -  -7.3   -5.7946   TTTCCAATAAAAAAA              GAGACAC AGG ATGTCTC              TTTTTTTACTGTTTG 100 31
GII90_RS19855 3851824 .. 3851850 - -12.4  -5.14965   ATTCCGATTAAAAAA         GGAAAGCTCC TTTTTTC GGAGCTTTCC         TCTACCATTCATTTC 100 34
GII90_RS19850 NONE
GII90_RS19845 NONE
GII90_RS19840 NONE
GII90_RS19835 3848071 .. 3848100 -  -5.8  -6.01187   AAGCAAAGAAAAAAA       CACACTTGATTCC CTAGC GGAG-CAAGTGTG       TTTTTTATGTCATTG 100 35
GII90_RS19785 NONE
        galE 3837490 .. 3837511 - -14.5  -5.00616   TTGTTCTTTAAAAAA           GGCCTTCTC AATT GAGAAGGCC            TCCATTCTTATTCCG 100 33
GII90_RS19770 3835466 .. 3835490 - -10.1  -5.37593   TTCTAAATGAAAAAA          TCCCTCTGT TTCAAGT ACAGAGGGA          TTTTTCTTTATTTAG 100 33
GII90_RS19760 NONE
        msmX 3831671 .. 3831692 - -14.5  -5.27779   TTCAATAGCAAAAAA           CCGGACATG TCTC CATGTCCGG            TTTTTTTGATCTTAT 100 37
GII90_RS19750 3830623 .. 3830638 -    -6  -5.26119   CCTCGAAAAACAAAA              GCCGCC AGCA GGCGGA               CAGCGGGTATTTCGG  87 145
        cydA NONE
        cydB NONE
        cydD NONE
        cydC 3820913 .. 3820932 -  -9.3  -5.63517   TTTTCAAACAAAAAA            GACAGCC TTTTAG GGCTGTC             TTTTATTTTACAGGA 100 28
GII90_RS19710 3819989 .. 3820011 - -12.1  -4.71426   GGGGTATCAAGAAAA           GCTGTCTTC TCTCT GAAGACAGC           TTTTTTATCATTCAA 100 33
        sigY NONE
GII90_RS19695 NONE
        yxlD NONE
GII90_RS19685 NONE
GII90_RS19680 NONE
GII90_RS19675 3815416 .. 3815437 -  -2.3  -3.33744   TCTTGCCGGAAAAAT           CGCACAGC TTATCGG GCT-TGCG           GGAGTTTTTTATGGA  45 103
GII90_RS19660 NONE
GII90_RS19655 3811653 .. 3811672 - -10.7  -5.64274   TGACCTATAAAAAAA            CAGCCGG GATCAG CCGGCTG             TTCTAGATGCGGACA 100 15
        licR 3809505 .. 3809524 -  -6.6  -2.82516   GTTGCTATCATCATA            TTATGAAA TCGC TTTCATAA             ACACTCAGGGTTTTT  58 75
GII90_RS19645 NONE
        celB NONE
GII90_RS19635 NONE
GII90_RS19630 3806061 .. 3806081 - -12.5   -5.5604   GCAAGTAAGAAAAAA            GCCGGCCCA TTA CAGGCCGGC            TTTTTTTACGCTTCA 100 31
GII90_RS19590 NONE
GII90_RS19585 3798269 .. 3798289 -  -6.7  -5.80364   ATTGTAACAAAAAAA            GACCGCATG AAA CGAGCGGTC            TTTTTTATTATCGGA  93 33
        ywaC 3797499 .. 3797518 - -13.6  -5.99154   TATCAAATAAAAAAA            GACGGCAC TTGG GTGCCGTC             TTTTTTAATCCACTT 100 30
GII90_RS19560 3793090 .. 3793110 -  -5.5    -3.494   GAATGTGTGATACAA            CAAAAAAGG TGT CATTTTTTG            AAGATGCGATAAAGC  58 16
GII90_RS19555 3792094 .. 3792116 - -10.7  -5.76237   GAGACAAACAAAAAA           CGCTTTTGA TCATC TCAAAAGCG           TTTTTTTATCTGATT 100 40
        celB 3785846 .. 3785875 -   -13  -3.34398   CTTTCGTTTGAAAGA       GATGATCAGCCC TATGAC AGGCTGATCATC        TATCACATCACATTT  93 28
GII90_RS19530 3785094 .. 3785119 - -10.6  -4.86385   AGCGGTAAAAATAAA         GAACGTACAT TTTGTG ATGTACGTTC          TTTTTTATCTATACC 100 30
GII90_RS19520 3783367 .. 3783387 - -10.4  -6.02914   TCTACATAAAAAAAA            GCTGCCCC TGAAC AGGGCAGC            TTTTTCATTATTTTT 100 33
GII90_RS19495 NONE
        thiM NONE
        thiE 3778237 .. 3778257 -  -7.6  -5.22312   ATGGACAGCAAAAAA            GCTGTCCT TTTAC AGAACAGC            CCTTTGAAGGAAAAT  93 47
        efeU NONE
        efeM NONE
        efeB 3774234 .. 3774251 -  -9.9  -3.59262   GTCGACACGCTGAAA             GAAGCCT GTAA AGGCTTC              TTTTATGATTCCAGC  80 28
GII90_RS19465 3773344 .. 3773361 -    -7  -5.85737   ACAGGAATAAAAAAA             GCTCTC TTTATC GAGAGC              TTTTTCCTTACTTTT 100 33
        slrC NONE
GII90_RS19440 3769440 .. 3769455 -  -2.6  -2.58418   TCTTCATAGAAAACG              GCAG-AT CAT ATGCTGC              AGTCCTCTCATACCC  41 33
GII90_RS19435 NONE
        galT 3766656 .. 3766678 - -13.5  -4.93595   ATAAAAATCGAAAAA           GCCTCAACC CTAGC GGTTGAGGC           TTTTGACTGGTTTGG 100 12
        qoxA NONE
        qoxB NONE
GII90_RS19410 NONE
        qoxD 3761858 .. 3761877 - -12.2  -5.27399   GAAGACAGCAAAAAA            CCCTCTTC CACT GAAGAGGG             TTTTTTGTATTATTC 100 35
        rodA 3759876 .. 3759897 - -10.9  -5.60993   CTCTGCACAAAAAAA           GACAGCCTC TGTA AAGGCTGTC            TGCATATCAAGAATT 100 32
        nfsA 3759025 .. 3759042 -  -9.1  -5.19879   CGTGAAACATAAAAA             CCCCTCC AGAC GGAGAGG              TTTGCTTTAGTTTTT 100 32
GII90_RS19385 3757843 .. 3757863 - -18.3  -5.29445   GTTGAATAAGAAAAA            GCCCTGCCG ATT CGGCAGGGC            TTTTTAAAGATCAGT 100 36
GII90_RS19375 NONE
        sacT 3753681 .. 3753704 -    -6  -5.84381   TGATCAATAAAAAAA          CTTCCAGAGA TCAC TCCCTGCAAG           TCAAAGCGGTTATTC  93 35
        scrA NONE
GII90_RS19355 3749770 .. 3749784 -  -2.9  -4.84311   TTTCACATAAGAAAA               TAGAA GGATT TTCTA               CATAAGTGTCCAAAT  65 23
GII90_RS19350 3749416 .. 3749434 - -13.2  -5.36441   TTTTCACAGAAAAAA             CTGCCGAT CCC ATCGGCAG             CCTGTTTATTTGATT 100 31
GII90_RS19340 NONE
GII90_RS19335 3747425 .. 3747437 -  -3.4  -5.14477   TATATACCTAAAAAA                TCAG ACAAG CTGA                CGCCTGCCAATATAA  73 13
GII90_RS19330 3746817 .. 3746831 -  -4.2  -2.63596   TTGGACGGGAGATCA               GTGGGA ATA TCCTAC               TGAAACGGCATACTA  47 38
GII90_RS19325 NONE
GII90_RS19320 3745237 .. 3745253 - -10.1  -5.65927   TACTCAAATAAAAAA              GCGCAGA TCA CCTGCGC              TTTTTACAAATCCTT 100 29
GII90_RS19310 NONE
GII90_RS19305 NONE
GII90_RS19300 3741566 .. 3741593 - -12.2  -5.64304   CAAGATAAGAAAAAA        GCCAATCACTCAT ATG ATGAG-GATTGGC        TTTTTTGTTTATAGA 100 34
        spsA NONE
GII90_RS19285 NONE
GII90_RS19280 NONE
GII90_RS19275 NONE
GII90_RS19270 NONE
GII90_RS19265 NONE
GII90_RS19260 NONE
GII90_RS19255 NONE
        rfbB NONE
        rfbD NONE
GII90_RS19240 3730509 .. 3730533 -  -3.6  -5.51165   AAAAGGGCAAAAAAA         GTCGAAGATGC CTCT GC-TCTTCGAT          TGATCACGTTCCTAT  81 43
        bslB 3729722 .. 3729744 - -11.4  -5.66684   GAATCCACAAAAAAA           GAGACTGAAA ACA TCTCAGTCTC           TGACTACAAATCTAT 100 44
        rocG 3728282 .. 3728298 -  -3.7   -5.0666   TACGCAAAAAACAAA              TGCAAAA TTA TTTTGCG              GAGGCTTCTCAAATT  72 39
        pruA 3726494 .. 3726521 - -12.1  -3.81062   ATCAAAAAGTTGAAA        TCGTGCGATCC GCTAAA GAATCGCACGA         TTTTATTTCTCTCAA  93 42
GII90_RS19220 NONE
GII90_RS19215 3723325 .. 3723346 - -15.9  -5.52909   TAACACGTAAAAAAA           GCTCTCCGG CCTC CCGGAGAGC            TTTTTCTATTGCGCC 100 31
GII90_RS19210 3721860 .. 3721873 -  -6.7  -6.04953   ATACAAACAAAAAAA               CCCTT TAAA AAGGG                TTTTTAATTATAGGA 100 56
        bacA NONE
        bacB NONE
        bacC NONE
        bacD NONE
        bacE NONE
        bacF 3715848 .. 3715869 - -14.5  -5.07941   AAAAGCATATAAAAA           CATCCCGCT TTTT AGCGGGATG            TTTCTTGTAATGACC 100 15
         pta 3712887 .. 3712910 - -14.6  -5.11033   CAGAAGCGCAAAAAA          GGCAGCCCTC GGTC GAGAGCTGCC           ATTGTCTTCAATTTT 100 42
        cysL NONE
        ywfL 3710950 .. 3710978 - -11.7  -5.36441   GCTTGAGATAAAAAA        TGCATGCCGGC ATATACA GCCGGCATGCG        AAGAACGTTCACCCA 100 34
GII90_RS19150 3709796 .. 3709821 - -10.5  -5.06505   AATGACATAGAAAAA         TCCCAAAACGG GCAG CTGTTTTGGGA          TTTTCGCCATGTGCA 100 133
GII90_RS19140 3708532 .. 3708552 -  -5.4  -5.26875   TTGTGAAGCAAAAAA           GCCT-GACC TGAG GGCCGAGGC            TAAGAAAAAATATGT  86 43
GII90_RS19135 NONE
GII90_RS19130 3706535 .. 3706561 - -13.2   -5.7946   TTGTCAATAAAAAAA         GCAAAAGAAACG GAT CATTTCTTTTGC         TTGGTATGGTTAACA 100 35
GII90_RS19125 NONE
GII90_RS19120 3704291 .. 3704321 - -11.2  -5.96894   ATTCAAATAAAAAAA       CACACCCATCCCTC TAA AAGGGACGAATGTG       TTGATCATCCGTGGT 100 293
        thrS 3701807 .. 3701818 -  -4.4  -4.86862   GTCAAAAAAGCAAAA                TGTG AATT CACA                 GCTTTTATCCTACAT  71 35
GII90_RS19110 3701257 .. 3701277 - -11.8  -3.90729   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTATTATCCCTAT  91 37
GII90_RS19100 NONE
GII90_RS19095 3699636 .. 3699674 - -10.4  -4.57837   ATATCCCCCTAAAAA   TGAAAAACCCCGAGTC TTGTTTC GGCTCGGGATTTTCCA   TGTCCTATTTCTGTA  95 109
        speE 3696327 .. 3696347 -    -9  -5.00616   CTTTCCTGTAAAAAA            GCGCAAGA TTCGC TCCTGCGC            CATACCTTCATTATT 100 36
        speB 3695399 .. 3695419 - -14.1   -5.7946   CTGGGAATAAAAAAA            CATCCAGAC ATC GTCTGGATG            TTTACTTATTTCACA 100 31
GII90_RS19060 NONE
GII90_RS19055 3691971 .. 3691983 -  -4.1  -3.85817   ACGTCCTTTTAGAAA                TGCAC AAC ATGCA                GCGGTTAAATCGTAA  56 30
GII90_RS19050 3690083 .. 3690131 -  -6.8  -3.91164   AATCCGTGAAAAACA TGACAGCAGCTTTTCAGAAACT CACAC AGTCTCATCAAAGCTGCTGTGA CTTTCAGCAACACAA  68 467
GII90_RS19000 NONE
GII90_RS18995 3681186 .. 3681209 - -11.8  -5.60993   TTTCTCATAAAAAAA          GGACAAAGCC CGAA GACTTTGTCC           TTTTGATCGTGATTA 100 38
        narK NONE
         fnr 3679058 .. 3679077 - -10.8  -5.55698   CACAAGGTAAAAAAA            CAAGGACA CCGC TGTCCTTG             TTTTTTTCAGTCAAT 100 32
GII90_RS18975 3677703 .. 3677723 -    -9   -5.9663   AAAGATCAAAAAAAA            CCGGCTCT ATTTA AGAACCGG            GCTCAGCGTTTTCAT 100 15
GII90_RS18970 NONE
        narH 3672385 .. 3672403 -  -4.4  -4.06781   ATCAAAAGTTAGAAA             CAGGAGCC GGG GCCGCCTG             AAAATGATAAGCCGC  61 0
        narJ NONE
        narI 3671108 .. 3671125 -  -9.1  -5.24129   CCTTGGCAGAAAAAA             CCCCCTC TTGC AAGGGGG              ATTTTCACGAGCGTT 100 30
         cls 3669150 .. 3669165 -  -6.8  -3.48276   TTTTTTCTTACAGAA              CACCTG AAAA CAGGCG               GGCAAACGACTCTTT  64 2
GII90_RS18940 NONE
GII90_RS18935 3666755 .. 3666796 - -15.5  -2.52795   AAGCGCTCTAACTTA CATACAAAAAAGGATAGAC ATCT GTCTATCCTTTTTCTTATG  CTCTTACATAATGGA 100 21
GII90_RS18915 NONE
        acdA 3660691 .. 3660703 -  -3.4   -3.0516   TATCAATAATGAAAG                CGAT TTTGT ATCG                TTCTTATACAAACCA  45 140
GII90_RS18905 3659986 .. 3660013 - -17.2  -4.67697   GGTGAAAATAAGAAA        GCTCCCTTTCAA TTTC TTGAAAGGGAGC         ATAACGTACTATGTT 100 126
        pyrG 3658228 .. 3658257 -    -8  -5.85425   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAACGG-CAAGTC       TTTTTTATTACTTCT 100 33
       spo0F NONE
GII90_RS18885 3656040 .. 3656062 - -13.4  -4.27861   AAGATAGACGGAAAA           CCGCCTGTCA AGC TGTCAGGCGG           CTATAAAAAGTTCCA 100 47
         fsa 3655284 .. 3655320 -  -8.8  -4.32857   TCGGTGAAATACAAA   GGCCGCGGCAAACAG GCATAAAG CTGTTTGCCGCC-CC    TTTCATTATTTGTTC  83 31
GII90_RS18875 NONE
        glpX 3652634 .. 3652649 -  -8.2  -3.92659   TCTGCAAAAGTTAAA              GCGGGC TCAC ACCCGC               TTTTTCTGTTTGTTA  77 38
GII90_RS18865 3652247 .. 3652261 -  -3.6  -2.52681   AGAGGAAATAGATAC               GTCTTT CAT AAAAAC               ACCACGCTTTTCATA  45 50
         rho NONE
        rpmE 3650615 .. 3650637 -  -9.2  -5.53436   AGACAATATAAAAAA           CAGGCAAG ACTGCTG CTTGCCTG           TTGAGAAATCTATTA 100 41
GII90_RS18850 3649928 .. 3649948 -  -5.4  -6.12328   AGAATATAAAAAAAA            CACCGG TGTTTTTAG CCGGTG            CATTCTATCTTTATA  95 54
        malS 3647958 .. 3647972 -  -4.2  -3.50133   TAGCTTTACAAAAAG               CTTTCC CTC GGACAG               AAAAATTTACTCGCT  55 43
GII90_RS18840 3646924 .. 3646940 - -12.3  -5.01042   AACCTAAAGCAAAAA              GCTCCCT TAA AGGGAGC              TTTTTTTGTTACGCA 100 34
        prfA NONE
        prmC NONE
GII90_RS18815 3643416 .. 3643434 - -13.2  -5.44119   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTTATTAAAACA 100 33
      spoIIR 3642228 .. 3642239 -    -3  -3.69094   AATCTATGAGGCAAA                TCTA TTTT TAGA                 CCAGATGATTAGGAA  50 34
GII90_RS18800 3641671 .. 3641703 - -12.1  -4.63218   TGTCCTGTAATAAAA      CAAGCGTTATCCACA AAT TGTGGACAACGCTAA      TAAAGAAGTGGATAA 100 60
GII90_RS18795 3640470 .. 3640524 -  -6.6  -4.17296   TCCGACATACATAAA TAACCCCCTT-GGACACGC-CCCGCT TTTTT AGCCTATGCGTGTCCAAAAAGGGTTA GAACATCTGACTGCT  70 42
GII90_RS18790 3639873 .. 3639891 -  -4.6   -5.5353   TATATGAAGAAAAAA             GAAACG GCGACTT CGTTTC             TTTTATTGGTATATT  84 39
GII90_RS18785 3639353 .. 3639364 -  -2.2  -2.91873   AGGATTTGCAAATGA                CCTG TTTG CAGA                 TTTTCTGACAACTTA  41 38
        rpiB NONE
GII90_RS18775 3638192 .. 3638217 -  -8.4  -5.09259   TATCTTAAAATAAAA         GAAAAGACTG GCTATG CAGTCCTTTC          ATTCGCACTCATAAA 100 24
        glyA 3636727 .. 3636751 - -11.4  -5.04987   AACATCGTCAAAAAA         CCCGCC-GGGC ATAA GCCCAAGCGGG          TTTTAGGATCTTAAT 100 36
GII90_RS18765 3635970 .. 3635993 - -11.8  -5.63504   AACTGGATAAAAAAA          TGAAACCCCC TTTT GGGGATTTCA           TTTTTTATTTTGTTC 100 30
GII90_RS18760 NONE
        atpB NONE
        atpE 3634133 .. 3634164 -    -3  -3.67481   TCAGACATAAAGCAA      TGGCGAAGGTTCTCT TGG AATGATC-TTCGCCA      TTTTTAGTTCATATA  50 53
        atpF NONE
GII90_RS18740 NONE
        atpA 3631410 .. 3631436 - -13.2  -4.57569   TCATCTGCGTAAAAA         GAGAGAAAAAGA GAA CCTTTTTCTCTC         ATCAGCATTCGAGTT 100 39
GII90_RS18730 3630520 .. 3630532 -  -6.2  -3.59979   TCTTTCTATTCTAAA                GCGG CTGCT CCGC                CGACAATTTCCGTAA  61 3
        atpD NONE
GII90_RS18720 3628613 .. 3628633 -  -9.8  -5.60993   GCGTTCATAAAAAAA            TCCTTCTC ATAAA GAGAAGGA            TTTTTTCTTATTTCC 100 33
GII90_RS18710 3627730 .. 3627747 -  -2.1  -4.16921   TAATAATGTTCAAAA             CCTAT-TA AAA TAGATAGG             GAAGCTGCTGTGAAT  53 12
GII90_RS18705 NONE
        murA 3625483 .. 3625507 - -10.1  -6.07374   ACAAAAAATAAAAAA          CCAGTATGCCA GAG TGACATACTGA          TTTTCAAGTAAGTTT 100 39
      spoIID 3624264 .. 3624296 - -16.5   -3.2247   AAAGATATTCAGGAA      CAGAAAAAGACGCCC AAT GAGCGTCTTTTTCTA      CTTTTTCGCCATATA 100 23
GII90_RS18690 3623196 .. 3623217 -  -8.7  -5.03994   TGTTACATACAAAAA           GAGGCTGAC CATC ACCAGCCTC            TTTTTTCTTATTTAG 100 33
GII90_RS18685 NONE
GII90_RS18680 3622194 .. 3622211 -  -6.2  -5.59655   TAAACCAATAAAAAA             GGCGCC TGGGGG AGCGCC              TGATCTTTAGGTTCC  91 41
GII90_RS18675 3621807 .. 3621828 -  -5.1  -5.03994   TCTGAGACACAAAAA           GAGCCCTCT ATAT AAAGGGCTT            TTACAGGATGTGATG  76 169
        fdhD NONE
        moaA 3619860 .. 3619883 -  -8.9  -5.46657   GATTCTAATAAAAAA          GCTTACCGG ACAGTG CCGATAAGC           TTTTGACTTCAAATT 100 39
        rapB 3618547 .. 3618564 -  -9.9  -6.22802   TTGCATAAAAAAAAA             CCATCTG CCAG CAGATGG              TTTTGTCTCATACTT 100 33
GII90_RS18655 NONE
        csbD 3617639 .. 3617663 -  -7.9  -6.40073   AAGCGAAAAAAAAAA          GACAAGAAACA TTT CGTTTCCTGCC          TCTTCCGTACGATTA 100 38
GII90_RS18645 3617140 .. 3617153 -  -3.1  -3.42583   CTAATACAGCGACAA               TCTGCC CCG GGC-GA               AGCTAAGGCTGTGCA  48 68
GII90_RS18640 3616755 .. 3616778 -    -6  -2.62616   TCAGGCGGGACATCA          CCTCCCTTTCT TCG AGAATGGG-GG          TCATACGGTAAGATG  54 106
        ureA NONE
        ureB NONE
        ureC 3614256 .. 3614276 -   -14  -3.68988   TTTTAGTCAATAGAA            CGGCCGGA TGCAC TCCGGCCG            CGTCTTATCAAAATA 100 33
GII90_RS18620 3613735 .. 3613760 -  -9.9  -2.57931   GTTAGCGGTGAGAAG         TCATCCCTTTT GATT AAAAGAGATGA          TTCATAACATCTTTT  74 13
GII90_RS18615 3613008 .. 3613037 - -13.7  -2.79276   AGCACTTATTAATGA       GAAAAACCCGGAG CTGG CTCCGGGTTTTTT        ATTATTCCGCTTCGC 100 27
         mta 3611693 .. 3611715 - -17.7  -3.61774   TATAAGATGCGTAAA           CCCCCGGCC TTTAC GGCCGGGGG           TTTTCCTGATGGTCA 100 13
GII90_RS18595 3609508 .. 3609548 -  -9.7  -5.47218   CTGCATGCAAAAAAA  CACACCCGGATCGTCTGGA AAA TCTCAACAATCCGGGTGCA  GATCTTCTTTAATAC 100 34
      spoIIQ 3607242 .. 3607262 -  -5.4  -5.82172   AGTAACAGAAAAAAA            CGCCCATC ACAAG GATAGACG            TTTTCTTCATTAAGA  91 35
GII90_RS18570 3606710 .. 3606737 -  -9.2  -4.89838   CTAAGAAAGACAAAA        GCCGGC-GTCT GAAATCA AGACAGCCGGC        TTTAATATTTCTCAT 100 27
GII90_RS18550 NONE
GII90_RS18545 NONE
GII90_RS18540 3601475 .. 3601498 -  -7.4  -5.38549   CTTAAACAAGAAAAA          GAGACAGACC TCAG AGCCCGTCTC           TTTCTTAAGATGCAG  95 30
        pucI 3599784 .. 3599794 -    -4  -3.07755   ATAGATTTCTAAAAC                 CATT ATA AATG                 TTCTATTTATGGAAA  47 81
GII90_RS18530 3598296 .. 3598327 - -15.9  -3.73042   TTTTCCATTAAAACA      CGGCGCCCTCTCG GTTGAA CGAGAGAACGCCG       CTTATAGCAATTATT 100 36
GII90_RS18515 NONE
     spoIIID 3595849 .. 3595859 -  -5.4  -3.04517   ATCCTCCTTGAAAAT                 CTGT TTC ACAG                 TAAATATCCACATTG  53 157
         mbl 3594792 .. 3594814 - -10.7  -5.60993   TTTTTCATAAAAAAA           CCTCATTCT TTTTC AGAATGAGG           TTTGTGAAATCAGCT 100 35
        flhO NONE
        flhP 3592638 .. 3592649 -    -3  -4.07437   AAAAGTATTAAAGAA                TCAA GAAT TTGA                 AATGAATTCACCAGT  56 382
        fabZ 3591267 .. 3591292 -  -6.9  -5.95539   TTGTAAAGAAAAAAA         GACAAATGTGCC GCT GGC-CATCTGCC         TTTTTTCAATTATTC 100 35
        mscL 3590812 .. 3590832 - -11.9  -5.72616   ATTGAGATAAAAAAA            GACGCCGTT TCT AACGGCATC            TTTTTTATTCCGGCG 100 30
GII90_RS18470 NONE
GII90_RS18465 3589251 .. 3589271 - -15.5  -5.14563   TTCTGCATGAAAAAA            GCTGCCGTT TTG AACGGCAGC            TTTTCTCTTCGTGCT 100 56
GII90_RS18455 3588188 .. 3588200 -  -3.3  -4.67168   AAAAACGCTTAAAAA                TGGCT TTC AGCCT                CTGTTTTTATCTTTC  64 19
         ssb 3587689 .. 3587705 -    -8  -4.52502   GGCAAAAAGAAAGAA              CCAGTC TGGTC GACTGG              TCAATTTTGAGGGGA  82 96
        glcR NONE
GII90_RS18440 3585802 .. 3585822 - -15.5  -5.19212   ATCATGACTAAAAAA            GCTGGCTCT AAA AGAGCCAGC            TTTTTTCCGTTCATA 100 116
GII90_RS18425 3581051 .. 3581071 -  -5.4  -5.60993   TCTCGCATAAAAAAA            TCCCGC TAAAGGCGT GCGGGA            TTTTTATGTTGCATA  88 29
        tkmA NONE
        ptkA 3579366 .. 3579394 - -11.9  -4.56597   CTTTTTTCGCAAAAA        TAAATAACGGGCA CGA TGCACGTTATTTA        TTTTTGCATGAAATT 100 23
GII90_RS18410 3578403 .. 3578417 -  -5.6  -2.85503   CTCCAACAGTTAAAT               TGCTGC TTT GCAGCT               TCCGTAATATCGTAT  52 183
        uglF 3577027 .. 3577045 -  -6.7  -5.62219   AATAGATGAAAAAAA             GACTGGT GCGCA ACCAGCC             TTTCTTTTTCATCTA  93 38
GII90_RS18400 NONE
GII90_RS18395 3575784 .. 3575796 -  -2.6  -3.68378   TTATATTTTAAAATA                GCCA GAAGG CGGC                TTAAATAGGGTAAAT  50 135
GII90_RS18390 NONE
GII90_RS18385 NONE
GII90_RS18380 NONE
GII90_RS18375 NONE
GII90_RS18370 3571964 .. 3571989 -  -5.5  -6.06529   CACATACAAAAAAAA         CACTTGATGACT TAG AGCC-CCAAGTG         TTACACGTGATTTTT  95 26
GII90_RS18360 NONE
GII90_RS18355 3570118 .. 3570133 -    -9  -5.38047   TATTTATAGAAAAAA              GCACCT GGAC AGGTGC               TTTTTTATTTTAGCC 100 30
         ggt 3566280 .. 3566307 - -14.2   -5.9663   AAATATCAAAAAAAA        GAACACCCAGAG CAAG CTCGGGGTGTTC         TTTTATGAAACGTTT 100 422
        cotH NONE
        cotB 3562274 .. 3562296 -  -3.4  -4.74103   CCTTTAACTGAAAAA           GGGCATCA CTTTATC TGATGCTC           CTCCATTATCTATTA  67 38
GII90_RS18305 3561535 .. 3561560 -  -4.7  -5.01811   GTATGAAACGAAAAA         CTGCCTTCT GCTTTTCA AGAGGGCAG          TTTTGTATACACTAG  76 37
        alsS NONE
        budA 3556334 .. 3556358 -  -7.2  -5.31519   AGAGCCAAATAAAAA          GAAAGCCC TGCTAAAAG GGGCTTTC          TTTTTTTCTTTTATT  95 36
GII90_RS18280 3555708 .. 3555739 - -12.4  -4.42806   GGATTTTTAAACAAA      TACAGCCCTGCC GTATGTTG GACAGGGCTGTA       TTTTAAACAAAAGGC 100 28
        pgsB NONE
        pgsC NONE
        pgsA NONE
        edmS 3545177 .. 3545200 -   -14  -5.27335   CTGGGCAAATAAAAA          GAGAGTGTCT CATC AGACACTCTC           TTTTTTGAATTATTT 100 35
        pgdS 3543801 .. 3543819 -  -8.9   -5.0065   TATGCATAAAGAAAA             GACTCCA GAGAT TGGAGTC             TTTTTCTTTTATTGC 100 34
GII90_RS18200 3540078 .. 3540099 - -13.7  -4.50193   AGTAAGCAATCAAAA           GGGTGCGCA TGAT CGCGCACCC            TTTTTTATGTTCCGA 100 30
        manA 3535144 .. 3535166 -  -7.1   -5.7946   TTTCTAATAAAAAAA           CTTAACCTC GAAGT GAGATTAAG           TTTAAATATGAGACA 100 27
        lytD 3532341 .. 3532381 - -21.5  -3.30243   ATTGAGGTGTGATAA  TCAAATAGGCTGTAGCTAT TTA ATAGCTACAGCCTATTTGC  AACTTTCTAAGTTTT 100 41
        tagD 3528087 .. 3528112 - -12.1  -4.81083   TGTAAGCATCAAAAA         GTACTTCTTAT TTCA ATAAGAAGTAC          TTTAATTAGATATTG 100 65
        tagE NONE
        tagF 3523685 .. 3523704 -   -10  -4.71382   ACAAGTATCTAAAAA            GCTGCCGA AAAA TCGACAGC             TATACATTTTATAAA  91 51
        tagG NONE
        tagH 3521104 .. 3521129 - -12.7  -5.34381   AAATCTAAACAAAAA         GGCTATTGGAC ATTC ATCCAATAGCC          TTTTTTTATTTCAAC 100 31
GII90_RS18120 NONE
GII90_RS18115 NONE
GII90_RS18110 3517559 .. 3517569 -  -2.6  -3.28405   ACAAGAGAGTACTAA                 TTTT TGC AAAA                 CAATTTTAATTTAGT  45 62
        ggaB 3514722 .. 3514743 -  -6.7  -4.32046   CTTTTAAAAAGTAAA           GAGAAG-TCT CGC AGAACTTCTC           CCAACATTTGAAGTG  73 62
GII90_RS18090 3511781 .. 3511807 -   -16  -5.56372   AAAGTAAAACAAAAA         GAAGCTTCGCAC AAT GTGCAAAGCTTC         TTTTTTATTTGCCTG 100 30
        lytA NONE
GII90_RS18075 NONE
        lytC 3506656 .. 3506683 - -11.5  -5.37043   ATTTCATATAAAAAA        GAGACAAATCT GTGATT AGATTTGTCTC         TTTCGATTATCTGTA 100 32
GII90_RS18065 NONE
GII90_RS18060 NONE
GII90_RS18055 NONE
        tuaD NONE
GII90_RS18045 NONE
GII90_RS18040 NONE
GII90_RS18035 NONE
GII90_RS18030 3497400 .. 3497425 -  -2.6  -3.78682   GTATAATCAAAAAAC         GCGCA-TCCCA ATTTA TAGGACTACGC         ATGTTTTTGAATCCC  50 20
GII90_RS18025 3496176 .. 3496195 - -10.7  -5.60993   TTGCGCAGAAAAAAA            CTCCGGC ACATAA GCCGGAG             TTTTTAATTCCTTTT 100 29
        degS NONE
        degU 3492118 .. 3492141 -  -8.9  -5.44119   GGCAGCCTAAAAAAA          GACCTGCCT AGTAAA AGGCAAGTC           TCCTATTATACTATC 100 36
GII90_RS18000 3491181 .. 3491201 -  -8.3  -5.86465   AAGAATATAAAAAAA            TCTCCGCTC TAA AAACGGAGA            TTTGGCCTTATTTAA 100 33
       comFA NONE
       comFB NONE
       comFC 3488661 .. 3488679 -  -3.1  -4.84761   ATATCGGCATAAAAA             CAGAATC ATTTA GCTTCTG             ATCAAGGTAAAAGAT  67 16
GII90_RS17980 NONE
        flgM NONE
GII90_RS17970 NONE
        flgK NONE
        flgL 3484864 .. 3484882 -  -3.1  -5.71983   TGAACTATAAAAAAA            GCGAACTC CTAA GAGC-CGC             TTACTTTAAAAAGTC  84 26
GII90_RS17955 NONE
        fliW NONE
        csrA 3483588 .. 3483608 -  -6.9  -6.23317   ACAAAAATAAAAAAA            TCCTCAC TTTTTTT GTGAGGA            TAATGCGGAGATCAC 100 8
         hag 3482501 .. 3482521 - -13.3  -4.59424   AAATTTAAATTAAAA            GACCCTGGC AAC GCCAAGGTC            TTTTTTAAAATTAAC 100 36
        flaG NONE
GII90_RS17930 3480451 .. 3480463 -    -2  -2.73124   TGTCATCCTCCAAAT                TACA TTTAT TGTA                CAAGAAGCTGTGATA  40 18
        fliS 3480032 .. 3480051 -    -2  -2.64735   AGTTGATCTATATTA            TTCATGCG ATCC CGCCTGAT             CCGTGCCGGTCCTTC  40 7
        fliT NONE
GII90_RS17915 3479196 .. 3479206 -  -2.6  -2.51057   GCTGAAACATAAATC                 TTTT GTG AAAA                 TTCAGTGAACTTTGT  41 127
         hpf 3478515 .. 3478537 - -11.3  -5.74684   TAAGAAAAACAAAAA           CCTTCCGCG GACAT CACGGAAGG           CTTCTCTTCATTATT 100 36
        secA 3475808 .. 3475832 -   -15  -2.83772   ACCTCATTAAAAGAT         CCGCAGGCGCC TGCA GGCGCC-GCGG          TCAGTAAACTTGCCG 100 48
        prfB 3474652 .. 3474674 -    -7  -6.08342   TAAGAAATAAAAAAA           CACACCCG TATGCAT CAGGTGTG           TTTTTCAGCTTATGA 100 35
GII90_RS17895 NONE
        cccB 3473251 .. 3473277 - -13.1  -4.91712   GTCAAGGCATAAAAA         CATCCTTGCCA GCACT CGGCAAGGATG         TTTTTATCTTACTTT 100 34
        ftsE 3472373 .. 3472383 -    -4  -2.76453   CGAGAATTTTAATCA                 TATG AAC CATA                 CTCCCCTCTTGACTC  46 8
        ftsX 3471446 .. 3471480 - -14.5  -3.95126   GAAAAAGAAGGCAAA    TG-AAAAGCCGTCCCG AAAA CGGAACGGCTTTTTCA     CTTTATACTCGCAGA 100 28
        ctpB 3469880 .. 3469899 -  -8.6  -3.91213   AAGCACAAAGAAACA            GGAGATGA AATA CCATCTCC             TTTAATTGACAAATA  80 27
        swrA NONE
        minJ 3467852 .. 3467887 - -20.5  -4.67608   CAGCGTAACACAAAA    CAGCCCGGCATCGCA TCATCC TGCGGTGCCGGGCTG     CCTTTTATGATCCCG 100 30
GII90_RS17845 3462607 .. 3462631 - -11.6  -5.24129   TTTGTGTATAAAAAA          CCTGCTTTTA AAACG TAAAAGCAGG          TATTCAGTCTTTATA 100 56
        uvrB NONE
        uvrA 3457549 .. 3457587 - -11.1  -5.27335   TGCCGTAAAGAAAAA  GCTTGCCTGCTAAGCCCA AGGA TGGACTT-GCCGACAAGC   TGTCCCCTCTTAACA 100 48
GII90_RS17820 NONE
GII90_RS17815 NONE
GII90_RS17810 NONE
GII90_RS17805 3454285 .. 3454302 -  -8.4  -5.13473   ACCACATGTAAAAAA             GCTGCC TTTGCG GGCAGC              TTTTTTTATTTTTTT 100 31
GII90_RS17790 NONE
        cypX 3450099 .. 3450120 - -10.1  -3.97602   ATATATGTAAAAAGA           GTCTCACCC GCAT GGGAGAGAC            CTTTGGAATTCTATT  85 39
GII90_RS17775 3445572 .. 3445600 - -14.7  -5.60993   TCTTTCATAAAAAAA        GCCTCCAACCCTT TTT AAGGATTGGAGAC        ATGGCGAAAATCAAA 100 11
GII90_RS17755 NONE
GII90_RS17750 NONE
GII90_RS17745 NONE
        ppaX NONE
        hprF 3438823 .. 3438846 - -12.5  -5.80364   ATTTTAACAAAAAAA          GTCCGCTGA TGTTAT TCAGCGGAC           TTTTTCAATCTTTCT 100 13
GII90_RS17720 NONE
GII90_RS17715 NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
GII90_RS17685 3430462 .. 3430480 -  -8.8  -5.54907   TTCACAAAACAAAAA             GAGCCGTA TCA TCCGGCTC             TTTACTCTTCAATCT 100 27
GII90_RS17680 NONE
GII90_RS17675 3427577 .. 3427589 -  -3.4  -3.09908   CTTTCTGAAAATAAG                GAAG TCACT CTTC                ATATTCCTCCTAAGA  45 35
GII90_RS17670 3427190 .. 3427216 -  -8.1  -5.50723   TGATCAAAATAAAAA         TCTCCCACTCA TTGTT TGAATAGGAGA         TTTTTGTGTTAGACA 100 34
        bmrA 3425239 .. 3425261 -  -8.5   -4.1964   CTCAATAGTTCAAAA           GGAAGGATT GGGAA AATCCCTCC           TCTTTTTTATTGGCT  81 55
GII90_RS17660 3423677 .. 3423699 -  -7.1   -5.8187   TATCTAACAAAAAAA           GAGTCGATT AAATA AATCAACTC           TTTAAAATTTACTAT 100 37
        cwlO 3421873 .. 3421896 -  -8.9  -4.68209   ATGTTAATAAAGAAA          GAGCCTTCT GTTTAT AGAAGGCCC           TTGTCATATTTATTA  90 38
        trxB 3420598 .. 3420625 -  -3.5  -5.64274   TTATGGACAAAAAAA        GGACACGGAT AACTGGAGA ATCCGTG-CC        AAAAAAGTGTATTCA  84 153
GII90_RS17645 NONE
        rapZ NONE
        mgfK NONE
        whiA NONE
GII90_RS17625 NONE
GII90_RS17620 3416044 .. 3416064 - -11.9  -5.18726   TGTTCATAAGAAAAA            GCTTGCAGA TAA CCTGCAAGC            TTTTCACGTTACAAA 100 34
        psdR NONE
        psdS 3413854 .. 3413867 -  -2.3  -4.91109   TCTTTATTATAAAAA               GGAAG TCAG CATCC                TCCCATCGAACTTTC  66 62
        psdA NONE
        psdB 3411098 .. 3411119 - -14.5  -5.09521   TCAATAAATCAAAAA           TCCGGTCTG ATAA CAGACCGGA            TTTCATATTACATAC 100 33
GII90_RS17585 NONE
        sulP 3407503 .. 3407519 - -10.8  -5.28778   AGCATGCATAAAAAA              GCGGCC GCGAT GGCCGC              TTTTTTTAACCTGTG 100 31
GII90_RS17570 3406377 .. 3406399 -  -9.2   -5.7827   AAGAGAAATAAAAAA           GAGATTTCCC TTA AGGAAACCTC           ACTTTGTTAAAAACA 100 112
GII90_RS17565 3405322 .. 3405332 -    -4  -3.76568   TTACCGATAACAGAA                 TAAG GCG CTTA                 CAGCGTTGATTCTCG  54 23
        mdxD 3403385 .. 3403395 -    -4  -3.62849   TTTACGAAACTATAA                 CAAT TGT ATTG                 TCCTATAGAAAGCGG  52 78
        mdxE NONE
        mdxF NONE
        mdxG NONE
GII90_RS17540 NONE
        mdxK NONE
        malL NONE
        pgmB 3394382 .. 3394407 - -13.4  -3.88015   AAAGTAATAACACAA         CCTGCAAGAG CTGCGT CTCTTGCAGG          TTTTTTTCATTTCAA 100 37
GII90_RS17515 3393098 .. 3393112 -  -2.8   -4.6635   AAATTGCGAACAAAA               CAAACT TAC AGCCTG               CGAATCAATTTATAG  65 348
GII90_RS17505 3390338 .. 3390382 -  -3.8  -5.04868   TGAAATGAAACAAAA CAAAAAAGACAA-GA-GTGGCA AGT TGCCAAACCATTGTCTTTCCTG TTGTTTGATTGGACG  72 132
GII90_RS17500 3389696 .. 3389717 - -11.7  -3.75115   TCTTCATAAAATCAA           GGCATATAC AGCT GTATATGCC            TTTGCCATTAAGCTT  91 33
GII90_RS17465 NONE
        racX 3380932 .. 3380957 -   -12  -5.82172   AGGAACATAAAAAAA         CAAGGACTGT TTGAAG ACAGTCCTTG          TCTGAAGCTAGCTTT 100 33
GII90_RS17455 NONE
        padC 3379822 .. 3379863 - -20.5  -4.76041   CATACTCAGCAAAAA GAAAACCCGGAAAAGAGAA GTAA TTCTCTTTTCCGGGTTTTT  ATGTTTATTATAATC 100 33
GII90_RS17430 NONE
        epsB 3375931 .. 3375949 -  -7.4  -3.10894   ACGACCAGCATCTAA             GGCAGC AACTTCA GCTGCC             CACAGCAGAGCCGAG  62 84
GII90_RS17420 NONE
GII90_RS17415 NONE
        epsE NONE
GII90_RS17405 NONE
        epsG NONE
GII90_RS17395 NONE
GII90_RS17390 NONE
GII90_RS17385 NONE
GII90_RS17380 NONE
GII90_RS17375 NONE
GII90_RS17370 NONE
GII90_RS17365 NONE
GII90_RS17360 3361653 .. 3361679 - -11.7  -4.80487   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG 100 7
        rpoN 3360023 .. 3360041 - -10.3  -5.41143   GATTCCTTAAAAAAA             TCCTCCC GTCTA GGGAGGA             TTTTATTTATATCGC 100 28
        lutR 3357300 .. 3357323 -  -9.6  -4.65895   GCTGCCATGTAAAAA          GACTGAACCA TTTG CGGCTCAGTC           TCAGTTGTTCGTATC  91 78
        ganR 3356181 .. 3356200 -  -9.4  -5.65927   TACCTAAATAAAAAA            TGACTTAG TGTC CTAAGTCA             TCCTTAATTCATACT 100 29
        ganS NONE
        ganP NONE
        ganQ NONE
        ganA 3350538 .. 3350556 -  -8.8  -4.77122   CTATAGAAAAAAGAA             TCCGCCCA TAT CGAGCGGA             GCATCAGCCTAATGT 100 34
        ganB 3349145 .. 3349188 -  -9.8  -5.10933   TGATGTAAAATAAAA TGATCCATGAGACATAACAA TGAT TTGTTACATCTCATGGATTT TTTTGTTTCAGCGTT 100 33
GII90_RS17295 NONE
GII90_RS17290 NONE
        yvfT 3344014 .. 3344033 -  -3.6  -3.72374   CCTCAGCAATAAACA            GACGAA TCATTCTT TTCGTC             CTCCAATCATTCTGC  54 32
        yvfU 3343389 .. 3343410 -  -8.7   -4.8048   GTGGCATATCAAAAA           CACTCCCGA TCTC CCAGGAGTG            CAGTATATGGTTAGA 100 36
        lutA NONE
        lutB NONE
GII90_RS17265 3340311 .. 3340332 -   -13   -4.8622   TTTTTCAAGCAAAAA           GCCCGGCA TATGCC TGCCGGGC            TTCCTGAGTTCAGCG 100 35
GII90_RS17260 3338838 .. 3338882 - -10.9  -5.93252   TTCAAAAACAAAAAA GCCCGCCGTCTC-CTACCTA ATCTAA TAGATAAAGAGACGACGAGC CTTCGGCTGACCGCG 100 343
GII90_RS17255 3337421 .. 3337446 - -19.1  -5.34365   GCACAATAATAAAAA         CCCTCTTGCCG GATG CGGCAAGAGGG          TTTCTTATTTACTGA 100 34
GII90_RS17245 3335469 .. 3335489 -  -4.1  -4.72497   CATTCAGGAATAAAA            GAATTTGAT TCG ATGAAATTC            GAACAATATAAAACG  69 55
GII90_RS17240 3334309 .. 3334337 -  -6.8  -5.87996   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTATAGCTGT  93 40
        araE 3331577 .. 3331600 - -13.2  -4.20368   GCATCCCAATATAAA          CAGCCCTTCC CGTA GAAAGGGCTG           TTTCATTAAAGCGTT 100 42
        cggR NONE
         gap 3329153 .. 3329177 - -12.2  -4.65895   GTCTTCATGGAAAAA          GGGAAAGGGA GTCCG TCCCCTTCCC          TTGTCCGCTTTCATT 100 91
         pgk NONE
GII90_RS17210 NONE
        gpmI NONE
         eno 3324068 .. 3324092 -  -9.2  -5.42265   TGAAAGCATAAAAAA          GCCGCCGAGA GAAAA TCCCGGCGGT          CTTTTTATTACTTGT 100 33
GII90_RS17190 3321619 .. 3321648 - -20.9  -4.56775   ATGCTCTTTTAAAAA       CAACCCCATCACC TGCT GGTGATGGGGTTG        TTTTATTGAATAGAC 100 28
GII90_RS17175 3319348 .. 3319381 -  -8.2  -5.07652   GTGCCGAAAACAAAA     GAATGCAGCTCTCT AAAATA AGAGAGCTGCTTTT      TGCATCATGAAGTTA 100 30
GII90_RS17165 NONE
       opuCB NONE
GII90_RS17155 NONE
       opuCD 3315076 .. 3315104 -  -7.5  -5.47218   GTTTATTTAAAAAAA        CCACCTCTGTT GTATTTA AATAGAGGTGG        TTTTTCTATCAGCTA 100 12
        sdpR NONE
        sdpI 3313947 .. 3313974 - -18.6  -2.61727   ATCCATTATAATTGA        GTGTCTTGCGGA TTGC TCCGCAAGACAC         TTTTTCAACGTGAAC 100 30
GII90_RS17115 NONE
       opuBB NONE
GII90_RS17105 NONE
       opuBD 3307322 .. 3307340 - -14.6  -5.56264   TTTAAAGAGAAAAAA             GAGGCTGG ACT CCAGCCTC             TTTTTCTATTCTATG 100 36
GII90_RS17075 3303798 .. 3303814 -  -3.5   -4.7219   CATAGGAATAGAAAA              CGCTTGG CTT CCTTGCG              TTTTTTGTTACTTTA  67 38
        secG 3302570 .. 3302593 -    -4  -5.71983   TTAATCAGAAAAAAA          CGTTT-TGAAT ATC ATCCAGAAACG          TGAAAAAGGCCTGAC  85 70
GII90_RS17060 NONE
         rnr 3299369 .. 3299396 - -10.7  -4.41348   TGTTTCCGAAAGAAA        GCAAATAGAGC GCTGCG GCCCTATTTGC         TGGTTGAGCTGCTAT  95 37
        smpB 3298758 .. 3298790 -  -8.6  -2.92175   CGTGAACACAGTATA     GCACAG-GCCTGATT TTCG AATCAAGCACTATGC      CTTTAGAAGCCTTTT  69 28
        ssrA 3298212 .. 3298243 -   -19  -5.24129   GGTTTGGAGAAAAAA      TAAAGCAGAACCTC TTAA GAGGTTCTGCTTTA       TTGTCAGTATGTATG 100 36
GII90_RS17040 3297257 .. 3297275 - -10.3  -5.80248   CAATATATAAAAAAA             CCTCTCC TATTG GGAGAGG             TTTAAAAGACACTGC 100 27
GII90_RS17035 NONE
GII90_RS17030 NONE
GII90_RS17025 3295783 .. 3295803 -  -6.9  -5.67063   CGCACGATAAAAAAA            CAGAGAC TTATACC GTCTCTG            CTTCATTACATCAGT 100 62
GII90_RS17020 3293727 .. 3293742 -  -4.8  -4.66625   ATAGAGACAAAGAAA              TTTACT TTCA AGTAAA               ACATCTCGAATTAAA  71 65
GII90_RS17015 3292953 .. 3292984 - -13.1  -4.30576   GCTGGAGCACTAAAA      CAAAAGCCTCCCC AAATAA GGGGAGGCTTTTT       CATTAGAATGTTTTT 100 28
        csoR 3291411 .. 3291421 -  -4.6  -2.79796   TTTCATCCTACCATA                 CCCC CGT AGGG                 TATTACAATAAAAAA  48 45
        copZ 3291125 .. 3291150 - -14.1  -4.71307   TAAAAATGAAAGAAA         TATCGCGCCTC CCTA AAGGCGCGATA          CCTTGAATCACTTGG 100 33
GII90_RS16995 3288641 .. 3288667 -  -9.5  -4.86621   AGTGTCAATGAAAAA         CAAAAACCGGC ATATA GCCGGTTTTTC         ATTTTACTTTTTGCA 100 24
        cadA 3286310 .. 3286335 -  -7.6  -5.46698   TTTAAAATTAAAAAA         GAAGCGGATC GCAATT GACCCACTTC          TTTATTTTAACAAGA 100 88
        bdbD NONE
GII90_RS16980 3285160 .. 3285180 - -11.1  -5.37593   TGCGAAATTAAAAAA            GCGCCCG GCATACG CGGGCGC            TTTTTTTGTTATTCA 100 34
GII90_RS16975 3284362 .. 3284382 - -10.5  -5.64274   TTATGCAGAAAAAAA            CCGATTTCA CTT CGAAATCGG            TTTTTTTGCTATTAA 100 37
        helD 3281853 .. 3281870 -  -9.9  -5.56264   TGTAAATAGAAAAAA             GAGAAGG ACTC CCTTCTC              TTCATTCAGCAATCT 100 27
GII90_RS16965 3279897 .. 3279907 -  -6.8   -2.7709   AATCAATATACATCA                 CGCT GAT AGCG                 TTTTTGCTGCTGCAT  58 2
        cysI 3278105 .. 3278129 - -15.1  -5.43487   AAATTATAGAAAAAA          GAGACAGGAAG CTA CTCCCTGTCTC          TCGTCTTTCTTTCTC 100 39
GII90_RS16955 3275843 .. 3275862 - -11.4  -5.80817   CTTAATATAAAAAAA            GCTGGCGC TCTA ACGCCAGC             TTTTTTTCTGCATTT 100 39
        pgoN 3274269 .. 3274285 - -10.1  -5.54894   AACGCACTAAAAAAA              CTCCCCA TAA CGGGGAG              TTTTTTGATTAAAAC 100 34
GII90_RS16930 3271758 .. 3271775 -  -9.9  -5.26875   TTCCGAATGAAAAAA             TCCCTCT ATCA AGAGGGA              TTTTTTACGTTTCCA 100 30
        sspJ 3268978 .. 3269004 - -13.8  -4.28375   GGAACAGATGGAAAA         TACGGATAGAGC CAA GCCCTATCCGCA         TGTGGTTATCGATTA 100 31
GII90_RS16910 3267172 .. 3267194 - -12.1  -5.26316   TGATTTTATAAAAAA           GACACCTGA GCAAA TCAGGTGTC           TTTTCATTATGCTTG 100 32
GII90_RS16900 NONE
GII90_RS16895 3263734 .. 3263745 -    -3  -2.57132   TGTTCCGTTGATAAT                GAAT TCAT ATTC                 GGCCCCCTCCTCTAA  41 37
GII90_RS16890 3262908 .. 3262926 -   -11  -6.09888   GCCGAATAAAAAAAA             TCCCGGCT TCA AACCGGGA             TTTTTTCATACAGTA 100 31
GII90_RS16885 NONE
GII90_RS16880 NONE
GII90_RS16875 3259645 .. 3259669 -  -9.4  -5.47218   TCCCAGCTAAAAAAA         GAACGCATTCC AATT GGA-TGCGTTC          TTTTTATTCATAGCG 100 29
        sigO NONE
        rsoA 3256719 .. 3256736 -  -4.8  -5.36314   CAAAACAGCAAAAAA             GGAGCA AACAAG CGCTCC              CTTTTGATGTTTTTT  84 53
        yvrH NONE
        yvrG NONE
GII90_RS16835 3253182 .. 3253202 - -12.6  -5.67063   TGTAGTATAAAAAAA            CGCATCCG TGTTT CGGATGCG            TTTTTTTTATACGTC 100 32
GII90_RS16825 NONE
GII90_RS16820 NONE
GII90_RS16815 NONE
GII90_RS16810 3248041 .. 3248066 - -12.6  -6.20267   TGAAAAACAAAAAAA         GCCGGCATGT ATTTGA ACACGCCGGC          TTTCCTTTTCACTTT 100 41
GII90_RS16805 3246604 .. 3246624 - -12.6  -5.61596   ATTGGCACAAAAAAA            CGCCATGC ACGAG GCATGGCG            TTTTAAAACCCTTTA 100 38
        liaI NONE
GII90_RS16795 3245360 .. 3245377 -  -6.3  -3.17194   ACGTGCGGAAGGGAA             GGACTTG ACCG CAAATCC              TTCCCCGTTCCGCTT  58 39
GII90_RS16790 NONE
        liaF NONE
        liaS NONE
        liaR 3241932 .. 3241944 -  -4.1  -2.88544   TGTGATTGTCAGAGA                CTTCG GAA CGAAA                GGCGCAAACAAATAG  46 48
GII90_RS16755 NONE
        fumC 3236525 .. 3236573 - -19.1  -3.55966   TTATTAAAACAGCAA CATATTTAGAAGAACGGCTGCTT AAA AAGCAGCCGTTCTTCCTATTACG CCTTTGGTTTTACCA 100 21
GII90_RS16740 3234823 .. 3234833 -  -2.6  -5.61596   AGCTGGAGAAAAAAA                 TAAA GGA TTTA                 TTATATTTAACGAAG  89 518
        htrB 3231579 .. 3231601 -  -9.2  -5.46657   TAGGGTAACAAAAAA           GCTGAACC TTAATCG GGTTCAGC           TTTTTGTTTTTTCTT 100 39
GII90_RS16705 3227633 .. 3227647 -  -3.6  -2.90028   TGTAGCAGAAAACAC               TGACTT TGA AAATCA               TTTTCAATTAGTTTT  46 80
GII90_RS16700 3226614 .. 3226650 - -14.7  -5.00616   TTCCTTTCGAAAAAA   CAGC-AAGGAGCTTTC TCAATT GAAAGCTCCTTCGCTG    CGTTATTTATCCATG 100 32
GII90_RS16695 3226312 .. 3226337 -  -9.8  -5.37345   CTGAATCACAAAAAA         GCAGTCTGCT ATAATG AACAGACTGC          TTTTTGGCTATTGTT 100 33
GII90_RS16680 3224134 .. 3224157 - -13.8  -2.77148   CCCATTAATAGAGCA          CCCCGCGGGT ATCA ATCCGCGGGG           TTTTTTATTCAATCA 100 30
GII90_RS16655 3220085 .. 3220101 -  -6.5  -2.54632   GAAGCCTATAAAAGT              CGGGC AACTTAA GCCCG              GAGGTGAAGGGAATG  57 209
GII90_RS16645 NONE
GII90_RS16640 NONE
        fadE 3214555 .. 3214576 - -15.9  -5.00616   GTGCTTCTTAAAAAA           GAGCTCCGC GCAT GCGGAGCTC            ATGGCCAATCAGACA 100 34
GII90_RS16630 NONE
        gcvH 3213612 .. 3213629 -  -2.7  -2.64155   GTTTGTCGAAAGCCA             TATTGGA CACC TCCCATA              ACGTTAGCGTGTCCA  41 64
GII90_RS16620 NONE
GII90_RS16615 NONE
GII90_RS16610 3212585 .. 3212595 -    -4   -2.9652   TTATAAAACGAACGA                 CAAT TTC ATTG                 GATATGCTGAGAAAT  47 44
GII90_RS16605 3211897 .. 3211924 - -14.2  -5.07652   TTCTGCAAAAGAAAA        GCCTTTCTGCAC ACTT GAGCAGAAAGGC         TTATATAAAATGCCT 100 264
GII90_RS16600 NONE
        metP NONE
        metQ 3209283 .. 3209303 -  -9.7  -5.46629   AATACGCGAAAAAAA            CCCCGGA ATTCTCA TCCGGGG            TTTCAGTCTTATTCA 100 34
GII90_RS16585 3208797 .. 3208812 -    -4  -2.85668   TAGCGGCAGATGAGA              CGAAAG CATC CTTTCA               GAACAAATGAGAATG  46 63
GII90_RS16580 3208482 .. 3208497 -  -6.8  -5.63236   ATTGAAAAAGAAAAA              GAGTGG ATTC CCACCC               TTTTTTAAAAGATTG  93 47
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB 3203030 .. 3203056 - -16.8  -5.26119   CTCTGAAAAATAAAA         GAAGACGAACTT CAA AAGTTCGTCTTC         TACAATCAAATTCGG 100 107
GII90_RS16550 3202510 .. 3202523 -  -2.4  -3.43071   TTCGATATGAATGAA               GCAT GGTACT ATGC                TAACAATCTGGCTAC  45 92
        glxB 3202037 .. 3202057 - -10.4  -5.31545   AAGAAGAGTAAAAAA           CCGC-GGCC CCTC GGCCAGCGG            TTTTTCTTCTGCATA 100 64
GII90_RS16530 3200291 .. 3200301 -  -3.2  -5.24647   ATACAGAAAAGAAAA                 GCTA GAA CAGC                 TTTATTATATTTGTT  73 58
GII90_RS16525 3199804 .. 3199828 - -10.8  -4.55128   ATGCCCAAATCAAAA          GCCAGAACTT GACTT AAGCTCTGGC          TTCGCTGTTCAATCC  95 54
GII90_RS16520 3198599 .. 3198626 -   -13  -2.62184   CTCCTCTGGACATTA        GACTATAATGTT ATAT AACATTATAGTC         TAATGCATAATGGTT  85 54
GII90_RS16515 3197274 .. 3197299 -  -7.7  -4.82901   TCTCCTTTATAAAAA         GAAAAGGTG CGAAGCTT CACCTTTTC          TTTGATTTATTCAGC  88 32
GII90_RS16510 NONE
GII90_RS16505 NONE
GII90_RS16500 3194204 .. 3194229 -  -2.5  -3.66666   CCGAAAAGCTTCAAA         TCCAACCCGAG AGCC CTGTGGTTGAA          TTAAAACGGATTTTA  50 392
        ugpC 3192531 .. 3192552 - -14.5  -5.06414   TGGCCGTAAGAAAAA           GGTGCTCCT TTTG AGGAGCACC            TTTTTCTAATACACA 100 31
        allC NONE
        pucG 3188685 .. 3188704 - -13.6  -4.61231   TCATATCGTTAAAAA            GCTTGCGG AGTT CCGCAAGC             TTTTCTTTACACCGC 100 32
GII90_RS16465 NONE
        pucB NONE
        pucC NONE
        pucD NONE
        pucE 3183287 .. 3183308 - -14.5  -5.05782   ACTGAGGCTAAAAAA           GTCCGGCTT TTAA AAGCCGGAC            TCCCGTCTACCCCCG 100 13
GII90_RS16410 3174769 .. 3174790 - -14.4  -5.40004   GAGGAAATCAAAAAA           CCCGGCGG TAAAAT CCGCCGGG            CTTACGAAGGAACGA 100 27
GII90_RS16405 NONE
GII90_RS16400 3173472 .. 3173485 -  -2.3  -4.64861   CTTTTCTAAAATAAA               TCGAG CTGT CTCGG                AGCAAGTCCGCTGTA  61 2
GII90_RS16395 NONE
GII90_RS16390 3171159 .. 3171191 -  -2.1  -2.74012   TTACCACGTCAACCA     CTCCCTTCATTCAT CACTTT ATG-ATGAAGGGCA      CAGCTTGTTGTGGGC  40 49
GII90_RS16385 3170778 .. 3170817 - -10.2  -4.63486   ATCTTGGCAAGAAAA  TCCCCCCTTACATATCACA ATG TATGCT-TGTAAGAGGGGA  CATAGTAATAGCCGG  91 53
        yunB 3169974 .. 3170021 -  -8.6  -5.63374   TGAATACCAAAAAAA GAAGTAACAAA-AAGCCGCCTCT TCA ACAGGCGGCTTATTTGCTGCTTT TTTCTTTTTTTGAAT 100 12
        lipA 3167838 .. 3167866 - -14.7  -2.82291   AATCGATAGGAATGA        CAAAAACGCCAGA TGA TCTGGCGTTTTGG        CATTATGCTTGTGCT 100 28
GII90_RS16360 NONE
GII90_RS16355 NONE
        nucF 3165548 .. 3165568 - -14.7  -3.92996   CGGCATACAGAATAA            GGGCACCCT TTT AGGGCGCCC            TTTTTTCAAATGTAT 100 31
       cotNH 3163719 .. 3163731 -  -2.7  -2.96779   CTTGGAAAAGACAAT                TGTTA ACT CAACA                CAGACATATAAGTTA  43 169
GII90_RS16335 NONE
GII90_RS16330 NONE
GII90_RS16325 3160352 .. 3160378 -  -6.5  -5.86061   CTCCAGCAAAAAAAA        GCGC-CCTCCGC TGAC GCTGAGGAACGC         TTGGCATGATCTATA  93 36
GII90_RS16320 3158274 .. 3158300 - -16.7  -3.10244   TCTTTTAATAAAGCA         GCCAGGCTGAT ATTTG ATCAGCCTGGC         TTTTTTATTAGAGAT 100 33
GII90_RS16310 3157493 .. 3157511 - -10.3   -3.9467   AATGATAGAGAAGAA             CCGCTGA TCAAG TCAGCGG             TTTTCTGTATACCCA  88 19
GII90_RS16300 3155891 .. 3155906 - -10.4  -5.79595   CGGCAAAATAAAAAA              GGGCCT GTCC AGGCCC               TTTTCTTTAAAACAT 100 32
GII90_RS16295 3154524 .. 3154557 - -17.7  -2.87132   CCCGTTTTTCATACA     TAAAAGCTCCTTGCA CTGA CGCAAGGAGCTTTTA      TCGTTTATATAAACA 100 30
GII90_RS16290 NONE
GII90_RS16285 3153077 .. 3153113 -   -11  -5.18726   TCCCCATAATAAAAA    CGCCTCCCTTAACGAT GATTT ATCGCTAAGAAAAGCG    TCAGTAATAGTTGCT 100 56
        paiA NONE
        paiB 3151579 .. 3151611 - -12.8  -5.71983   TTAATCATAAAAAAA     CGCCAAGTC-AGCGG TTCT CCGCTTGAGTTGGCG      TTTTCTGCTACTTCT 100 55
GII90_RS16265 3150138 .. 3150163 - -12.7  -6.01369   TAAATAATAAAAAAA         GGAGCTTGTGTC TGC GACACA-GCTCC         TTTTTTATTTGAAGA 100 30
GII90_RS16255 3147562 .. 3147575 -  -9.5  -5.09762   TTTTAATAAAGAAAA               CCCGC TTCC GCGGG                TTTTTAGAAAAACTT 100 29
GII90_RS16250 3147211 .. 3147260 -  -5.9  -2.65521   GGCAGACTAATCAAC CTATTCCACCCCCCTGCGTT GTTTTTAGTGT AACGC-GGGGGCTGAAATAA AGTCAACGGCTGGAA  54 28
GII90_RS16245 3146865 .. 3146883 - -10.4  -5.66684   GAACGCATAAAAAAA             GCTTTCTT TAG AAGAAAGC             GGCATTTAAAACATT 100 31
        spsC 3146105 .. 3146126 - -11.5  -5.81412   TTCATGTAAAAAAAA           CGCTCCTGC TTTC GCTGGAGCG            TTTTATTCTTTCACC 100 28
GII90_RS16230 3143930 .. 3143954 - -12.9   -5.4505   TTTCGGAAGAAAAAA          TCCCTGCCGCA TCA TACAGCAGGGA          TTTTTCATTACTCGT 100 33
GII90_RS16225 3142459 .. 3142480 -   -13  -4.59069   ATCATAACGAGAAAA           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 32
GII90_RS16215 3141028 .. 3141051 -  -5.4   -5.4505   TTCCCGAATAAAAAA          GGCACCTTGAT CAA AT-AAGGTACC          TGCAGACTATCAATA  88 92
        besA 3140022 .. 3140040 - -10.3  -3.27525   TTTTTTTAAAGGCAA             GGCTGAG TATGT CTCAGCC             CATTGATAGATGCGG  79 20
GII90_RS16205 NONE
        dhbC NONE
GII90_RS16195 NONE
GII90_RS16190 3135231 .. 3135243 -  -2.6   -3.0353   CCTTTTATAAATAAT                CCGC GTTTG GCAG                CACTTGCTGGCTGCG  43 2
        dhbF NONE
GII90_RS16180 3127806 .. 3127826 - -11.2  -5.10064   CGTAAGATAGAAAAA            GAGACTGC GGCAA GCAGTCTC            TTTTTGATAAGATTA 100 38
GII90_RS16160 3123636 .. 3123673 -  -9.1  -2.88861   GATCACCCTTACATA   GAAAGAGCGCCGTCTTC TTTT GAATCAGGCGCTCCTTC    CCTTTCATACTGTTA  69 38
        yukD NONE
        essB 3121949 .. 3121959 -  -2.4  -2.85985   ATAATAGACTCAAAT                 GGCG AAC CCCC                 TTACGGCCGAATGGC  41 73
        essC NONE
        esaA 3114186 .. 3114222 -   -11  -3.16088   AGAGGGTATGAAAAG    GGAAAAGGAGAGCATA CAAAT CATGATCCCCTTTTCC    ATGCTGCGATCACGC  80 35
        essA 3113676 .. 3113689 -  -3.1  -4.08706   CGGTGATGATATAAA               GTTCC ATTG GAAAC                CTCCTTTTCCGTTAT  57 81
GII90_RS16130 3112933 .. 3112951 -  -8.9  -5.93809   TTTGTATAAAAAAAA             GAGCAGA AAATA TCTGCTC             TACAAAAACTCTTTA 100 25
GII90_RS16125 3112105 .. 3112116 -  -5.8  -2.97245   TTATGGATAATGACA                CAGG CTTA CCTG                 ATAAAACAAAGGGGT  56 132
GII90_RS16120 3111767 .. 3111789 -  -2.7  -4.74103   CGCTTAACTGAAAAA          TAGGACGTCC TGTT GTACG-CCTA           TTTTTCATGCGCAAG  65 46
GII90_RS16110 NONE
GII90_RS16105 3109850 .. 3109878 - -13.3  -5.60689   TTATACAATAAAAAA        GCAACAGCCTCTT GTG AAAAGGCTGTTAC        CCGTTAAACGAAACT 100 22
GII90_RS16100 NONE
GII90_RS16095 3109063 .. 3109081 - -11.8   -5.1356   TGCCATGAACAAAAA             GACAAACG GTC CGTTTGTC             TCTTACGATTTCAGT 100 28
GII90_RS16090 NONE
GII90_RS16085 3106906 .. 3106950 - -14.7  -3.17888   AAAATAATATATACA TAAAGAAAA-CTGGCCCTTC GCGAAT GAAAGGCCAGTTTTTCTTTA TTCTTCCTCAAGCTC 100 23
        pdeH 3105143 .. 3105166 -  -4.5   -4.7889   ACAAACACCGAAAAA          GACCGCAAC GCTAAA GTTGTGGCC           TTTTCGCTTTGTCAT  71 441
        degQ 3104617 .. 3104632 -  -7.6  -5.98781   TAGAACGAAAAAAAA              GACTTG TTTC CAAGTC               TTTTTCACGAAATTT 100 30
        comQ NONE
        comX NONE
GII90_RS16050 3101036 .. 3101055 - -12.2  -5.26316   CCATTTTATAAAAAA            GACTTGGC CTGT GCCAAGTC             GTTTCCGTTATAAAT 100 44
        comA NONE
GII90_RS16040 3099919 .. 3099944 -  -7.6  -3.31603   ATTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG  67 31
GII90_RS16000 3093669 .. 3093691 -  -9.2  -4.40003   CTTCATAAACAGAAA           GAGTTCCG TTTTATG CGGAACTC           TTTTTTTATTTATTC  91 31
GII90_RS15960 3083959 .. 3083986 - -17.2  -3.64682   CACCAAACGCTGAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 6
GII90_RS15940 3080009 .. 3080020 -    -3  -2.56122   TCCGATCAGAAAATG                CTAT CTTT ATAG                 TATATCAATTCCCCT  41 54
        kapD 3078854 .. 3078867 -  -2.3  -4.58663   AGCAGCTTCCAAAAA               GGCAC TACG GTGAC                CATTAAGCTTCCCGC  61 515
GII90_RS15915 3075956 .. 3075970 -  -7.1  -6.01369   CAAATAACAAAAAAA               CCGGT GCTGA ACCGG               TTTTTTTAAGGCGTG 100 31
GII90_RS15905 NONE
GII90_RS15900 3073238 .. 3073279 -  -3.7  -4.81551   TATGCACAGCAAAAA GGGGGTAAACTGAAAATACC AAA GGCTTTCT-AGTATTCCCCC CTTTTATTGGATGCG  69 63
        yugI 3072688 .. 3072711 - -13.2  -4.58773   TGCATGAAATCAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTTCATGCTTAT 100 37
GII90_RS15885 3070984 .. 3071009 -  -9.7   -5.8096   GACAAAAAAGAAAAA         GGGAAGCAGCC AAAC GGCTATTTCCC          CTTTTTTTATAGTGA 100 32
GII90_RS15880 3069709 .. 3069732 - -12.5   -4.4846   CAAGTCAAGAAGAAA          GGGCGGAAT GACTGG ATTCCGCCC           TTTGGGTTTATAGAG 100 33
GII90_RS15875 3068243 .. 3068266 - -12.4  -4.85599   CTGATTTTATAAAAA          GCCGACCGGC AAAT GCCAGTCAGC           TTTCTCACATTAATC 100 35
GII90_RS15870 NONE
GII90_RS15865 3067316 .. 3067339 -  -6.7  -5.72616   AGGCATACAAAAAAA          GGAGGGG CCGATGCTTT CCCCTCC           TCTTACATACAAGGT 100 68
GII90_RS15850 NONE
GII90_RS15845 3065003 .. 3065026 -  -9.6  -5.73672   AAATAAGCAAAAAAA          GCCCTTACCA TAAA TGGTAAGGGG           CCACCTCCTTAACGT 100 40
GII90_RS15840 3063680 .. 3063700 -  -5.4  -5.39721   TGATGACACAAAAAA            CAGCCG TTTGTTCCC CGGCTG            TTTTTTATCAAAAAT  86 33
GII90_RS15835 3061897 .. 3061915 -  -8.8  -6.14618   GATAAAACAAAAAAA             CTCCAGTC TAA GGCTGGAG             TTTAGCACCATAGAT 100 27
GII90_RS15830 NONE
GII90_RS15825 3061316 .. 3061329 -  -3.1  -3.89346   CCTTCATTCGATAAA               GCCGCA GCG TG-GGC               GGGTGTGACAAGCCC  55 95
GII90_RS15820 3060877 .. 3060907 -  -6.1  -4.56775   ATCGTCCGCTAAAAA       GCCCCATCGCC TATTTTCCG GACGATGGGGT       TTCAAATGCCTTTCG  76 5
        mcpB 3057960 .. 3057978 - -10.3  -5.74122   TACCATATAAAAAAA             CAGCGCT TTGAT AGCGCTG             TTTTTCGGTTTTTAC 100 37
        tlpA NONE
        mcpA 3053679 .. 3053703 - -11.5  -6.11019   AAAAACTAAAAAAAA          CACCCAAGC GCAACAA GCTTGGGTG          TTAAGGCTTATTATT 100 36
        tlpB 3051580 .. 3051603 - -11.8   -5.7946   TTTTTAACAAAAAAA          GAAAGCAGCA GATA TGCCGCTTTC           TCGTTTCATTATGAT 100 34
GII90_RS15790 NONE
        rhaR NONE
        rhaB NONE
        rhaM NONE
        rhaA 3045443 .. 3045470 -  -9.9  -5.47399   TCAAGCTTAAAAAAA       TCCGCCCGCGTGC AAAT GC-CGC-GGCGGA        TTTTTTATTAGACAA 100 33
GII90_RS15760 3043052 .. 3043064 -  -5.5  -3.48593   TATTTTTTTACATAA                CGGGA GCT TCCCA                TAAATGGAAAGCCCG  58 64
GII90_RS15755 3042149 .. 3042170 -  -8.8  -5.38951   AATTGACAGAAAAAA           TAAGGCTC GGAAAA GAGCCTTA            TTTTTCGACTTACAT 100 35
GII90_RS15750 3041973 .. 3041989 -  -9.5  -6.09196   CTCAAAACAAAAAAA              CCCTTAT CGA ATAAGGG              TTTAAAGGTATGGAG 100 34
GII90_RS15740 3039347 .. 3039379 - -10.9  -4.23434   GAAAAGATTGCAAAA      TAAAAACCTTTTC GCTCAAT GAAAAGGTTTTTA      CCATGTTTCTATTTT  90 34
        lytG 3038310 .. 3038343 -  -5.3  -2.72973   TTAAAAAGTGATAAC     TTCCGTGGAATATTA TACC TCAAATTCCCCGGAA      TGGAACAAAGAATTA  51 61
GII90_RS15730 3037983 .. 3038002 - -10.7  -5.58454   GTGATATCAAAAAAA            TCCGGCG TGCAGT CGCCGGA             TTTTTTATGATTCGA 100 30
        betB NONE
        gbsB 3031383 .. 3031405 - -10.6  -5.06451   CATTATCCCAAAAAA           TCCCGCTC TGTAAAG GAGCGGGA           TTTTGATTATACCGT 100 32
GII90_RS15695 3030720 .. 3030765 - -16.5  -4.28115   ATGAAAGAAATTAAA GAAAAGATAGAAAGGGCCTGAT TTA ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTTCGCT 100 6
GII90_RS15685 NONE
        floT NONE
GII90_RS15675 3027432 .. 3027469 - -14.3  -4.26189   TGACAAAGCGTAAAA   GTAACAATCCCCCAGCGA ATT CCGCTGGGGGATTTTT-C   GTTATCTGTTAAGAA 100 27
GII90_RS15665 3024543 .. 3024568 - -11.3  -2.72371   GTTTTCAAAGAACAC         GTTTCGAAGGA ATGA TCCTTCAAAAC          TAAACAAGACAGGGA  78 88
GII90_RS15660 3021485 .. 3021502 -  -8.5  -4.49556   TCGCCACCAAACAAA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGGT  86 55
         rrf NONE
GII90_RS15650 NONE
GII90_RS15645 3021143 .. 3021155 -  -3.5  -3.09648   CAATAGACTTGAATA                TTATA TCA TATAA                AAGTGGTGCCGGCAA  45 29
GII90_RS15640 NONE
GII90_RS15635 3020934 .. 3020962 -  -4.5  -3.09516   TGTTCTACCACTGAA        CTACTTCCGCA GAAATGG TGCGGATGAAG        GGACTTGAACCCCCA  50 12
GII90_RS15630 NONE
GII90_RS15625 3020769 .. 3020779 -  -2.4  -3.36823   GGGCGCAAAACTTAA                 TGCC GAG GGCC                 GGACTTGAACCGGCA  45 15
GII90_RS15620 NONE
GII90_RS15615 NONE
GII90_RS15610 NONE
GII90_RS15605 NONE
GII90_RS15600 NONE
GII90_RS15595 NONE
GII90_RS15590 NONE
GII90_RS15585 NONE
GII90_RS15580 NONE
GII90_RS15575 3019859 .. 3019882 -  -2.4  -2.98493   TTTACCACTAAACTA          CACCCGCAATT TTT ATTTG-GGGCG          ATTGATGGGAATCGA  42 19
GII90_RS15570 NONE
GII90_RS15565 NONE
GII90_RS15560 NONE
GII90_RS15555 NONE
GII90_RS15550 3019397 .. 3019415 -  -8.9  -6.23317   ATAAAAACAAAAAAA             CCTTGCA GGATA TGCAAGG             CTTCTGGATGACCCG 100 31
        glgB NONE
GII90_RS15540 NONE
        glgD NONE
        glgA NONE
        glgP 3011259 .. 3011275 -  -9.4   -5.7946   CTGTGAACAAAAAAA              GCCGCT TATAC AGCGGC              TTTTTCACATCATCG 100 30
       cotSA NONE
        cotS NONE
GII90_RS15500 3006788 .. 3006809 -  -7.4  -5.55698   GAGAACTTAAAAAAA           GGCATAAA TGTGAC TTTATGCC            TTGCGCTTTACAGTT 100 19
GII90_RS15480 3002273 .. 3002289 - -12.3  -3.06183   TCCACGCTGATTGAA              CCCCCAA TTA TTGGGGG              TTCTTTTCCGTTTTC  85 16
GII90_RS15470 NONE
        menD NONE
        menH NONE
        menB 2996397 .. 2996423 -  -8.1  -5.10933   GTATTGAAAAGAAAA        CAGCTTG-GACC GCAA AGTCTCAAGCTG         TTGGTTTACTAGATA 100 48
        menE NONE
        menC 2993678 .. 2993697 - -10.7  -5.72616   ATTTACATAAAAAAA            CCGGCTG GGTCAG CAGCCGG             TCCAAACGAGAAGGG 100 111
        mntA NONE
        mntB NONE
        mntC NONE
        mntD 2989610 .. 2989636 -   -11  -4.50058   GATTTATAATTAAAA         GAAAGAGCTG CATCAGC CAGCTCTTTC         TTTTTGCATGTTGAG  95 11
GII90_RS15405 2986503 .. 2986522 -  -4.2  -5.88565   GTCATAATAAAAAAA            GACAAACC CTCA GGCCTGCC             TTATTTCCCCATGTT  91 26
GII90_RS15400 2985754 .. 2985774 -  -5.5  -2.57192   ATGGAATCGAAGCGA            TTAAAACAC ATG GCGCTTTAA            AAGGCGGATGGCTGA  50 117
GII90_RS15390 2985003 .. 2985030 - -12.9  -5.26918   AGACGTCACAAAAAA        GACCTTTTTGC TTAAGC GCAAAAAGGTC         CTTTCTATTTTAGCC 100 35
GII90_RS15385 2984460 .. 2984478 -  -2.4  -3.42699   ATTGATCCACCACAA             GAAAATCA CTC TGATTCAC             ACAATCAATGATGAT  45 30
GII90_RS15375 2983739 .. 2983766 - -16.4  -5.38839   GATACAAAAAGAAAA        GCCGGACGTCTT TTTT AAGACATCCGGC         CGTTCTATTTTTGAA 100 42
GII90_RS15370 2983165 .. 2983179 -  -2.7  -3.53224   TACTTTTGCCGGAAA               GTGCG ACCGA CGCTC               TGGGCTTTATTATGA  48 59
        ytkD 2982506 .. 2982523 - -12.7  -5.39721   GGAGGACATAAAAAA             CCCGGCA CATG TGCCGGG              TTTTTTATTCAATCC 100 30
GII90_RS15345 NONE
GII90_RS15340 2978668 .. 2978691 - -15.4  -5.49579   GTATAAAAAACAAAA          GCCAAGAGCA ATTA TGCTCTTGGC           TTGTTTTAATTGACG 100 31
        metK 2975342 .. 2975362 - -11.2  -4.08285   GATAAAAAAGGGAAA            GCCGCTTA ACCAG TAAGCGGC            TATAAAATTATTCTC  89 33
        asnB 2973278 .. 2973322 -  -8.8   -5.0065   GATGGAGAAATAAAA GGATAACAACAAGGCTTTCGA CTAC TCGAAAGCCTTGTTGTC-TGT TACACAAAGATGACT 100 25
GII90_RS15320 2971766 .. 2971794 - -12.6  -2.96216   TTCTATGAGCACACA        CAAAAAGAGCCC ACTGG GAGCTCTTTTTG        TCAGCTGATATTTCG  88 26
        ytpA NONE
        tbcS 2969076 .. 2969100 -  -7.2  -5.81412   GCCATCGAAAAAAAA          GCTCAGATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAATT 100 8
GII90_RS15290 2967083 .. 2967104 - -14.5  -5.60993   TTTTTTACAAAAAAA           CGGACCCTT TTAA AAGGGTCCG            TTTTCCTACACATCA 100 31
GII90_RS15285 NONE
GII90_RS15280 NONE
GII90_RS15275 NONE
GII90_RS15270 NONE
GII90_RS15265 NONE
GII90_RS15260 NONE
        ytrF 2961496 .. 2961514 -   -16  -4.96848   TGCGCTATAGAAAAA             GCCGGCTG TCT CAGCCGGC             TCGTTCGCATTATAA 100 35
        bceR NONE
        bceS 2959719 .. 2959742 -  -9.6  -5.55001   GAACAAAAAAGAAAA          GCATGTGACA TTTT CGTCACACGC           TTATGACATGTTCAA 100 18
        bceA NONE
        bceB 2956913 .. 2956931 - -13.2   -5.4182   AACGATAAACAAAAA             GCTCCAGA ATG TCTGGAGC             TTTTTCTGTTTCACA 100 36
GII90_RS15225 2954586 .. 2954610 - -10.2  -4.38154   AGATTGTTGACAAAA          TCCTAAAATG GTTTT CATTTTAGGA          TTTTGTCATCTTTTC  91 192
GII90_RS15215 2952685 .. 2952713 -  -7.4  -6.02546   CCAAACTAAAAAAAA        CTCCCTCATCCC AAAAA GGGACGAGAGAC        TTTCGTTTTCCCGCG 100 327
        leuS 2950142 .. 2950161 - -10.8  -5.86965   ACTGATGAAAAAAAA            TCCCCTTT TGGC AAAGGGGA             TTTTTTCTAGGCTTA 100 38
GII90_RS15205 2949728 .. 2949749 - -10.2   -5.4659   GAATACAAATAAAAA           CTAGGGGA CCGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 22
GII90_RS15175 2943166 .. 2943188 - -10.7  -5.43974   AAAAGGAAACAAAAA           GACCGTTTT CACAC AAAACGGTC           TTTTTCGATTTCTTT 100 47
        bioW 2942224 .. 2942236 -  -6.3  -3.72576   CTTTTTTCTATCAAA                TCATG AGT CATGA                TCTTCCTCCCACTCT  63 13
        bioA NONE
        bioF NONE
        bioD NONE
        bioB 2937991 .. 2938011 -  -6.9  -5.61881   GTTCAAAAATAAAAA            CAATCGACA TCA TACCGATTG            CTTTTATTGATTCTT 100 41
        bioI NONE
GII90_RS15140 2935912 .. 2935940 -    -9  -5.64321   ATAACAAAAGAAAAA        GAGCATAATCTT AGAAA ATGATTATGCTC        CGTTCTCCTCCTCGT 100 18
GII90_RS15135 NONE
GII90_RS15130 2933309 .. 2933333 -  -9.4  -5.12617   GAAGCATGTAAAAAA         CCCAAAACCGC TTGC GCG-TTTTGGG          TTTTTCCAATGTTAT 100 37
GII90_RS15120 NONE
        rmgQ NONE
GII90_RS15110 NONE
GII90_RS15105 NONE
GII90_RS15100 2926151 .. 2926162 -  -4.4  -2.56596   TTCTCTATCAATCTA                TTCC GTTT GGAA                 CAGCGTTATGATAGA  47 51
GII90_RS15095 2925909 .. 2925934 - -16.3   -5.5353   CATATTAACAAAAAA         GATCTTTCCGC GCCT GCGGAAAGATC          TTTTTATTTGCGATA 100 29
        murJ 2921034 .. 2921050 - -10.1  -4.77173   CCTTTATAAAAGAAA              GCCCGCA GCA TGCGAGC              CCTCAGTTTCATCAT 100 51
GII90_RS15075 2920261 .. 2920281 - -12.6  -4.99043   TGCTTATAAATAAAA            CCCCGCAT TCGGT ATGCGGGG            TTTTTGTCATGCTTG 100 32
GII90_RS15065 NONE
GII90_RS15060 2917767 .. 2917786 - -12.2  -5.24989   GGATAGACCAAAAAA            CCCAAACG TCGC CGTTTGGG             TTTTTTATGTAAACA 100 30
        pepV 2914937 .. 2914962 - -13.3  -5.47821   ATTTATTTAAAAAAA         GGACTGGCTTC AGCA GAAGCCGGTCC          TTTTATTTTGCAAGC 100 28
        thpR NONE
GII90_RS15035 NONE
GII90_RS15030 NONE
        pulA 2909124 .. 2909163 -  -2.3  -5.98675   TATAAAAATAAAAAA  GACAGCTATTGA-GAG TCTCATATG CTAATCAATAGCCGTC  CTTTAAATTTTAGCG  87 58
GII90_RS15020 2907844 .. 2907868 -  -3.5    -5.626   GAGCGCATAAAAAAA          GAGGGTCCC GTCTGCT GGAACACTC          CTTTCCCATGTATAA  84 376
        trmB 2907069 .. 2907088 -  -8.6  -5.93809   GGCCCATAAAAAAAA            CAGACTCC TGTC AGAGTCTG             TCTTTACGTTCTCCA 100 29
GII90_RS15005 2906164 .. 2906175 -    -3  -3.61922   AACATGCAGGGTAAA                CATA AAAA TATG                 CTATCGCTTCATTCG  48 26
        maeA 2904360 .. 2904388 -  -9.6  -5.32944   CGGACAAGCAAAAAA       TAGAAGCCGCTGC CTAT GCAGCGGCT-CTT        TTTTATTATATCGCG 100 31
GII90_RS14990 2902745 .. 2902780 -  -4.7  -5.68489   CAGAATAAGAAAAAA    GCTTGTCGATCCGGGC TTACT GCTCGT-TCAACAAGC    TTTTATGAAACCTAC  88 37
GII90_RS14980 NONE
GII90_RS14975 NONE
GII90_RS14970 2900897 .. 2900911 -  -2.2  -2.59323   AAAAGCGTTCATAAG               TAAAAA TCC TTTCTA               ATCCTTTTTCGGACG  40 23
GII90_RS14965 2900224 .. 2900247 - -13.2  -4.59944   ATCAGCAGAAACAAA          GCCGCTAAAC AAGG GCTTAGCGGC           TTTTCACATGATTCG 100 66
        sftA 2897099 .. 2897113 -  -3.4  -4.07568   CGCGGCGGCTGAAAA               GCCTCC CTT AGCGGC               GTATTTTATATGTTT  57 182
GII90_RS14955 2895694 .. 2895721 - -14.4  -4.08706   TTCCCATCAGATAAA        TAAAAAGCAGTG AGAT CACTGCTTTTTA         TTATGCCATGACGTT 100 26
GII90_RS14950 NONE
GII90_RS14945 NONE
        ytxJ 2894274 .. 2894295 -  -9.5  -5.93809   TTTTTACAAAAAAAA           GCG-CCAGAT GAT ATCTGGACGC           TTTTTTCTATGACAA 100 32
        aroF 2892959 .. 2892974 - -11.8  -5.75599   GAAAGCATAAAAAAA              GGCCGC AGGC GCGGCC               TTTTGGATTGTTCAA 100 41
        ccpA 2891668 .. 2891697 -  -5.8  -5.14563   CTCCCCATGAAAAAA       GCAAGAATTCACC ATAAA GGTGAAG-CTTGC       TCTTTGTTTTTCTTA  83 38
        motP NONE
        motB 2890105 .. 2890124 -  -6.4  -5.46129   GAACAAAGTAAAAAA            CGACCTTT ACGA AGAGGTCG             TTTTTGATTTTTTAA  93 12
        acsA 2885451 .. 2885476 - -15.5  -5.85244   AATTAAAATAAAAAA         CGCCCCTTCGT TTAC ACGAAGGGACG          ATTGATTATCGCGGT 100 307
GII90_RS14895 2884114 .. 2884141 - -14.3  -5.27335   TGCGGTAAACAAAAA        GATCCTTTGCC TTCAGT GGCAAAGGATC         TTTTTCTTATTTATA 100 32
GII90_RS14885 NONE
GII90_RS14880 2881211 .. 2881235 - -10.1  -4.70583   CGCAGTAATATAAAA          GCCCAAAAC TGATATC GTTTTGGGC          TTTTTTTATTTTATT  91 31
        refZ 2879575 .. 2879586 -  -5.8  -3.37487   GCATACCTTCAAAGA                GCTG ATTT CAGC                 CTGCGGAAGCATTGA  56 401
        ezrA 2877190 .. 2877211 -   -13  -3.52192   GTTAATGTCACAGAA           CGCCTGCG TTATTG CGCAGGCG            TTTTGTAATAAAAAA  95 88
GII90_RS14850 NONE
        thiI 2873227 .. 2873240 -  -5.3  -3.54475   CTTGTGAGTATAGAA               TGTGT CAAA ACACA                TGGCTTCATTCAGAA  58 78
GII90_RS14840 2872945 .. 2872964 - -13.6  -5.25735   GTAAAAAATGAAAAA            GAGTGGGG ATAC CCCCACTC             CTAAGCCATTATGTG 100 51
GII90_RS14835 NONE
GII90_RS14830 2869586 .. 2869615 - -18.1  -4.52589   CTTTTTTATAGAAAA       TAAAAGGACAGGC TGCT GCCTGTCCTTTTA        TGATTTCTCATATAC 100 23
        sppA NONE
GII90_RS14815 2867049 .. 2867073 -  -9.4  -5.43866   CAATTCCTAAAAAAA         TAAACCCGGAC GGAA GTCCGGG-TTA          TCGGTTATTTGCGGT 100 30
GII90_RS14810 NONE
        ytfJ 2865823 .. 2865847 -   -13  -5.78622   TTATGCCAAAAAAAA          GTTAACTGCG GCCAG CGCAGTTAAC          CTTTTTTTAATAATT 100 32
GII90_RS14800 2865208 .. 2865228 -    -9  -5.14563   CTTGCCATGAAAAAA           GCTCC-GGC GGCA GCCTGGAGC            TTTTTTCCCTGCTTA 100 38
GII90_RS14795 NONE
GII90_RS14790 2863914 .. 2863926 -  -2.7  -3.25073   CGGTGAATATCAACA                TCTTC TCC GAAAA                ATATCTGACTTTTCC  45 115
GII90_RS14785 2862625 .. 2862644 - -10.8   -5.5112   TGCATCAACAAAAAA            GCACATTC AAGA GAATGTGC             TTTCATGCGATTTAT 100 37
GII90_RS14780 2862017 .. 2862039 - -11.4  -5.93809   CTTTTATAAAAAAAA           CTTCACCTAA ATT TCAGGTGAAG           TTTCATAGTATTTAT 100 45
GII90_RS14775 NONE
        argH NONE
GII90_RS14765 2859082 .. 2859099 -  -7.7  -5.71712   TGGCATACAAAAAAA             GCTGCCT GTAC AGACAGC              TTATTCTGCAGGAGA 100 26
GII90_RS14760 NONE
GII90_RS14755 2857425 .. 2857450 - -14.1  -5.75538   CTGAAAAAATAAAAA         CCACCTCCTGA TTCA TCAGGAGATGG          TTTCACGGTTTAAAG 100 35
        snaA 2855797 .. 2855810 -  -3.7  -2.62184   GGCTGCCTCACATCA               TGCCC AGCT GGGCG                CACCTAAAAGCGTTG  45 9
        tcyJ NONE
        tcyK NONE
        tcyL NONE
        tcyM NONE
        tcyN NONE
GII90_RS14715 NONE
GII90_RS14710 NONE
GII90_RS14705 NONE
        ribR NONE
        sndA 2847236 .. 2847248 -    -2  -2.64225   GCAAAAACGATTAAT                TTCT TCATC AGAA                CACCCCATCTATATC  40 39
GII90_RS14690 2846250 .. 2846266 -    -8  -5.79595   CTGGAAAATAAAAAA              GAAGCC CGACC GGCTTC              TTACAGCGTTGATTT 100 100
GII90_RS14685 2844602 .. 2844613 -  -5.8  -3.57263   AGGCGTACGGGCAAA                GCCA TCTT TGGC                 AAAAGAAATATGTTC  59 258
GII90_RS14675 2843436 .. 2843458 -  -8.5  -3.41309   ACAGATGAACACTAA          GAG-AGAGGG TCTC CCCTCTACTC           GTGTTCTTTACATAA  70 20
        dnaE NONE
        maeB 2837330 .. 2837379 - -14.6  -3.76749   AAAAATAATGTTAAA CCCGGCTGAAATTTTTTTAAGG CTAACC CCCTAAAAAAATTTCAGCCGTC AGTTTAACTTGAGAA 100 91
        accD NONE
        accA 2835247 .. 2835274 - -12.2  -5.27923   GAATGTCACAAAAAA        TAAACGTG-AGCC AAA GGCTTCACGTTTA        TTTAGTTTACCCCGA 100 27
GII90_RS14635 NONE
         pyk 2832301 .. 2832318 - -11.3  -4.85822   ATGATAAAGAGAAAA             GGAAGGG ATTC CCCTTCC              ATTTTCACCTGTAAT 100 40
        fxsA 2831822 .. 2831857 - -10.5   -4.7254   ACCGTTCAGCAAAAA    TAAAACGGCAGCCGT TTTTTC ATGGCTGCCGTTTTT     TATTTGATGATGATC 100 25
GII90_RS14615 2830126 .. 2830141 -  -7.5  -5.93809   TTTGCATAAAAAAAA              GCGGC TTTAAG GCCGC               TTTTTTTTATGAAGT 100 32
GII90_RS14610 2828570 .. 2828601 -  -5.5  -4.45083   TTCATATTTAGAAAA      CATTTTATTTTTCT TATAT AGA-AAATAAAATG      ATTTTTCCTAACATT  70 120
GII90_RS14605 NONE
         mdh 2826240 .. 2826269 -    -8  -4.81551   CATTTATAGTAAAAA       GAGAAAGGCT GTATTAAGCA AGCCTTTCTC        TCTTTTTATTAGGAT  88 34
        phoP NONE
        phoR 2823492 .. 2823518 -  -5.9  -5.48787   AGAAGACACAAAAAA        GGACGGGAAC ACAAATAG GTTCCCG-CC         GTCAAAATTGGCTCC  91 119
        polA NONE
        mutM 2819862 .. 2819876 -  -4.2  -2.58249   GACAGCTTGGACAAT               GAAGCA TTA TGCTAC               TTTTTTGTCTGGCAC  47 22
        ytaF NONE
GII90_RS14570 2818436 .. 2818456 - -14.1    -5.055   TTAATGGCCAAAAAA            CACCGTTCA ATA TGAACGGTG            TTTTTTGTATTATGC 100 35
GII90_RS14555 2815770 .. 2815794 - -14.3  -4.99435   CGTAAGAACCAAAAA          GCAGCCAGCGC TCC GCACTGACTGC          CCTCATGCTTTATGA 100 35
GII90_RS14550 NONE
GII90_RS14545 2813891 .. 2813936 - -13.5  -5.35224   TTTATAAAAATAAAA GGAGCATAAGCTAAAAAGCGCA TAA TG-GCTTTCTAGCTTCAGCTCC CTTTGTGTTCGCAAT 100 46
        nrdR 2813199 .. 2813222 -  -6.8  -4.50976   TTGCACATGAGAAAA          GAGCTA-GAAG AAT CCTCTTAGCTC          TTTTAACGCTCTTTC  76 28
        dnaB NONE
        dnaI NONE
GII90_RS14525 NONE
        ytxC 2808763 .. 2808788 - -11.1  -4.96848   TTTTGCATATAAAAA         CCCCGCCCCCT ATGA AAGGGACGAGG          TTGAATAAACGGAAT 100 367
        thrS 2806766 .. 2806791 -   -12  -6.04953   AGAGAAATAAAAAAA         GCATGATCTC TTCAAT GAGATCATGC          TTTTTTATTTTATTT 100 35
        lytS NONE
        lytT 2803319 .. 2803342 -  -5.3  -4.81249   GCTGAAATGCAAAAA          GCCGC-CCAT CAAAT ATGGAGCAGC          TTTTTCAATTCCTTC  75 10
        lrgA NONE
        lrgB 2802015 .. 2802035 - -12.6  -6.14618   CATAAAATAAAAAAA            GCCAAGGC ATTCA GCCTTGGC            TTATCCTCCGATCAG 100 26
        infC NONE
        rpmI NONE
        rplT 2799738 .. 2799758 - -12.6  -5.03994   CTTTATATAGAAAAA            GCCGCTCT GCTGG AGAGCGGC            TCTATATGATTACTT 100 35
GII90_RS14465 2799412 .. 2799438 - -13.8   -5.4477   AAACTCGCAAAAAAA         GCAGAAGAGCGT TAA ACGCTTTTCTGC         TTTTTATAAATCAAA 100 29
GII90_RS14455 2797729 .. 2797756 -  -9.2  -5.76633   GTACAGACAAAAAAA        TAGAATCCACCT CAAT AGGCGGATTCTT         CCGTATCTTTATTGG 100 34
        abnA 2796570 .. 2796588 -  -8.8  -5.40072   TTTCTTTTAAAAAAA             GCCGGG GGCAGAG CCCGGC             TTTTTAATTCAATAG 100 34
        araA NONE
        araB NONE
        araD NONE
        araL NONE
GII90_RS14425 2790561 .. 2790574 -  -3.1  -2.91264   CGGGCTATTCATATA               GACCA TGGT TGATC                AGCGTTTTGTTTTCA  44 1
GII90_RS14420 NONE
GII90_RS14415 NONE
        araQ NONE
GII90_RS14405 2785844 .. 2785863 - -13.6  -3.82946   GCAGTTGAAAGACAA            GCCGGAGA GAAA TCTCCGGC             TTTGCTATTCTTATG 100 36
GII90_RS14400 NONE
GII90_RS14395 NONE
GII90_RS14390 2783477 .. 2783501 -   -13  -4.02456   AAACATCATGAGAAA          GCCCAAAACA GACAT TGTTTTGGGC          TTTTGTGCGTTATTC  95 35
GII90_RS14365 2778074 .. 2778097 - -13.2  -6.34616   GGAAAATAAAAAAAA          CCCGTCCCTT GTAC AAGGGACGAG           TTGTGGCCGCGGTAC 100 299
        pheS NONE
GII90_RS14350 2774523 .. 2774544 - -13.1  -5.36441   CGTTCATAGAAAAAA           GCTTGCAGA TTTC TCTGCAAGC            TTTTTTATCAGCCTC 100 33
        zapA NONE
GII90_RS14335 2772620 .. 2772638 -  -5.3  -5.45726   CATACTTGAAAAAAA             CTTCTCC GGACA AGAGAAG             TTTTTTTATGCCCCG  88 31
        polX NONE
GII90_RS14325 NONE
GII90_RS14320 2767937 .. 2767964 - -10.1  -5.78622   GGACGGCAAAAAAAA        GAAAAAGAAAG GTAAAT CTTTCTTTTTC         TCATAATATGAACAG 100 122
        lcfA 2766111 .. 2766128 -  -7.1  -4.03234   TCCTTCCTATAGAAA             TGAATGA CTAT TCATTCA              TAATTTCATGATAAG  73 87
        fadR NONE
GII90_RS14305 NONE
        etfB NONE
        etfA 2762881 .. 2762901 - -15.5  -5.34055   ATAAATATGAAAAAA            CCCGGACTT TTA AAGTCCGGG            ATTTCCTTTATGAGT 100 33
GII90_RS14290 NONE
GII90_RS14285 NONE
        trxA 2760523 .. 2760544 -    -8   -5.7946   TGGCGAATAAAAAAA           GCGATCCC TCAATC GGAATCGC            TCTGGCATGTAAGCA 100 49
        uvrC 2758360 .. 2758384 -   -13  -5.88565   TCCACAATAAAAAAA          GCAATGAGAG GAATA CTCTCATTGC          TTATCAATTAATCAT 100 301
GII90_RS14270 2757028 .. 2757050 -  -9.9  -4.87291   CAGTGTAATCAAAAA          GGCGGTGACT GCAT AGTC-CCGCC           TTTTTGATTGTCATT 100 39
        sdhC 2755683 .. 2755693 -  -3.2  -3.25202   TACTCTTAAACAAAT                 GCAA AAA TCGC                 TTTTAAGCCTACGTA  47 5
        sdhA NONE
        sdhB 2753085 .. 2753104 -   -10  -5.41143   TATTGTTTAAAAAAA            CCTCTCCC ATGC GGAAGAGG             TTTTTTCTTCTTATA 100 36
GII90_RS14245 2752601 .. 2752615 -  -2.9  -3.31263   AGGTGACGTTTACAA               GATAA TTAGT TTATC               GTGTATGAAGAAGCG  46 21
        gerE 2752103 .. 2752115 -  -4.1  -4.63218   CTTTTTTGAAGAAAA                TGCAA GAC TCGCA                GGAGAGAAATAGAGG  66 181
GII90_RS14235 NONE
        racE 2750735 .. 2750755 - -13.3   -5.9362   CAAAACAGAAAAAAA            CCCGCAACA TAC CGTTGCGGG            GAAAACTATCTTTTA 100 31
        gerM 2749490 .. 2749520 -    -7   -4.2528   CCGGAATTGAATAAA      GAAAGAGG-CAGC CGGAAC GCTAACCTCTTTC       TTCCTAGTATATCAA  75 51
GII90_RS14220 NONE
GII90_RS14215 NONE
GII90_RS14210 2747524 .. 2747563 -  -3.6  -2.57211   ACGGTTTTTTAGAAT  TTTTTTCATGAGGAAGAA AATT TTCTTCCTCATGACATTT   TCATAGTGTGACTCG  45 26
GII90_RS14205 2747321 .. 2747345 -   -13  -5.56673   ACCGACAACAAAAAA          CCTCAAATCC TAAAT GGATTTGAGG          TTTTTCTTTTGGTAC 100 39
        ilvB NONE
        ilvN NONE
        ilvC NONE
GII90_RS14170 NONE
        leuB 2738545 .. 2738565 -  -8.3   -3.1355   TCTACCTAGAGCTAA            GACCGCTTA ACG TAAGCTGTC            ACACATTAGAAATTG  69 24
        leuC NONE
        leuD 2736457 .. 2736479 -  -7.6  -5.48825   CACCAGGCAAAAAAA           GCCGCCGG ACAAATA CCGGCCGC           TTTTTCAGGCTTGAA 100 30
GII90_RS14150 2735320 .. 2735330 -  -2.6  -2.89079   AATACAACCACTATA                 TTAT AAC ATAA                 CACATAGCGCTTTCA  42 56
GII90_RS14145 2733805 .. 2733829 - -12.9  -4.43859   CATAATTGTACAAAA          CAAGGCACGAA TGA TTCGCGCCCTG          TTTTATTAGTACTAT 100 55
        clpX 2732286 .. 2732311 - -17.7  -5.47218   TTGCATGCAAAAAAA         CCTCCTGAGTG TTAC CACTCAGGAGG          TTTGTGCTTATCTTT 100 39
GII90_RS14135 2730495 .. 2730513 -  -7.5  -5.52384   CCTTCATGAAAAAAA             CCCTATT ATCAA AATAGGG             TTTAAACGGATTCTT 100 27
         lon NONE
GII90_RS14125 2727411 .. 2727432 - -14.5  -5.03227   ATACGATAAATAAAA           CCGGTAGAG GATC CTCTACCGG            TTTATCATTTTTTTG 100 19
GII90_RS14115 NONE
GII90_RS14110 NONE
        hemC NONE
GII90_RS14100 NONE
        hemB NONE
        hemL 2720389 .. 2720414 - -10.5  -5.20216   GAGAGCACGAAAAAA         CCGGCA-CAAGG AGT CCTTGATACCGG         TTTTCACTCTTATCT 100 35
      spoVID NONE
        cotN 2717495 .. 2717523 -  -8.8  -4.63044   ATGGATATAAACAAA        CAAGTCCGCGCC ATTAA GACGTGGACTCG        TTTTCAGCCTGAAAT  90 10
        valS 2714175 .. 2714196 - -14.5   -3.7511   TCTTTTATAAGACAA           GGCGGTTTC TCTA GAAACCGCC            CCGGCTTTTCATTAA 100 37
GII90_RS14065 2712816 .. 2712842 - -12.4  -5.60864   TACACATGAAAAAAA         CGGCAGAATC TTTTTTT GATTCTGCCG         GAGCCGGATGCTTTT 100 39
GII90_RS14060 2711917 .. 2711941 -  -4.3  -5.96894   AGGCAAAGAAAAAAA          GAACAAGAC TTTTGTC GCCTTGTCC          AAAAAACGTTCGTCA  95 54
      spoIIB NONE
         maf NONE
        radC 2709324 .. 2709337 -  -2.3  -4.98531   TTCTTAAAGCAAAAA               TACCC TAAA GGGAA                AAACTCATAAACTCT  66 72
        mreB NONE
        mreC 2707360 .. 2707391 -  -4.4   -4.0251   AGCATCATAACGAAA      GGGAGAAGGAAACGT TTC ACGAT-CCTTCCTCC      TCTGTATCGACAGTC  61 10
        mreD 2706850 .. 2706863 -  -2.5  -4.34482   TTCGTCAAAAAAAGA               TAAAA TCCT TTTTA                CTCATCTCTCAATTC  57 23
        minC NONE
        minD 2705271 .. 2705296 -  -8.3   -6.4275   CAAAAACAAAAAAAA         CCTGACACAGC ATAT GCTTTGTCAGA          TTCTTCTCTTTGATT 100 49
     spoIVFA NONE
     spoIVFB NONE
        rplU NONE
GII90_RS14000 NONE
        rpmA 2702390 .. 2702411 -  -8.7  -5.79526   ATATTGCAAAAAAAA           CTCCAGTCA TCAT CGACCGGAG            TTTTTTGAATCATTA 100 38
       spo0B NONE
        obgE 2700166 .. 2700187 - -14.5  -3.63744   CCCCCCTTTAAAATA           GAGAGCCTG GCAC CAGGCTCTC            TTTTCAGCCAACATT 100 43
        thrR NONE
        pheA 2698808 .. 2698821 -  -5.2  -5.66989   TAAAGACTAAAAAAA               GCCC TCTAGT GGGC                TTTTTTTATAATTGG  88 31
        nadB NONE
        nadC NONE
        nadA 2693491 .. 2693512 -  -2.4  -3.75653   AAGGAAGGGAAAATA           TTTCTGATC TACGT GATC-GAAA           GCATTCGATTCAGGG  49 12
        safA 2692193 .. 2692212 - -10.8  -6.09196   TTGAAAACAAAAAAA            GGAACGAT TTAC ATCGTTCC             GAACGATCACTCATT 100 32
        sgpA 2691440 .. 2691466 - -11.6  -5.30616   TGATGCAAAGAAAAA         GGCTGCCGAA TATCACT TCCGGCAGCC         CTTCCTTCCTAGCGG 100 34
GII90_RS13930 2690621 .. 2690645 -  -8.5  -4.43213   CTGAACATACTAAAA          CCGGCCCGA TATGACC TCGTGCCGG          TTTTTTATGAACGAT  86 30
GII90_RS13910 2688310 .. 2688331 - -17.3  -4.98531   TTCTTAAATCAAAAA           GGCAGCCGC ACAA GCGGCTGCC            TTTATCATGTATTTT 100 41
        iolG NONE
GII90_RS13895 2685011 .. 2685025 -  -2.1  -3.45324   TAGTTTGACCAAAGA               GGCTA CTGCT TAACC               GTTTTATCAAAATTT  45 13
        bofC 2684422 .. 2684437 -  -7.6  -5.86061   TTTCACGAAAAAAAA              GACATG AATA CATGTC               TTCAATCAGCGGACG 100 41
        ruvA 2683686 .. 2683705 -  -2.8  -2.63596   CTTCACTTGAGACGA            GCCGTTCA TCCA TGAACATC             ACCTTACTTTAATAG  41 29
        ruvB NONE
GII90_RS13875 NONE
        queA NONE
         tgt NONE
        yajC 2679916 .. 2679937 -   -13  -5.36441   CTTCCACATAAAAAA           GAGCGGGC TCACTT GCCCGCTC            TTTTTTGTTTGCTAT 100 56
GII90_RS13850 2678665 .. 2678683 -  -4.5  -3.34043   TTGATCATCCGATAA             TGGTCAC GTGCG GTGCCCA             TCTTTTTCATCAATA  53 10
        comN 2676693 .. 2676707 -  -6.4  -2.60075   CCTGTGCGAATCAAC               CTGCTA TCT CAGCAG               TTCTTCCAATGCTTC  57 14
       secDF 2674411 .. 2674436 - -15.5  -5.12707   TGAAACTTCAAAAAA         CAGGCTGCCCT GCAG AGGACAGCCTG          ATATTTTTTATTGCG 100 33
GII90_RS13830 2673775 .. 2673795 -    -4  -2.60615   ACTGGTTTTAAACAT            GGCTTAAC ACTAG GTTAAGCT            CCCTTTGCTGTTAAT  45 19
GII90_RS13825 2673331 .. 2673369 - -10.4  -2.76227   GCTAACATAAATTCA  CCCCTCAACC-ACCCTA TTATAC TAGAGCAGGCTGAGGGG   TTTCAAATAATATTC  77 46
        recJ NONE
GII90_RS13815 2670405 .. 2670423 -  -3.8  -5.31545   AACAATAGGAAAAAA             GCACCC TGACATG GAGTGC             TTTTTCGTTATGCGG  78 47
        relA NONE
         dtd 2667585 .. 2667629 -   -14  -2.77876   GGATTAGAGAAATAC TTC-CAATAAAAAAAGCTGCC TTTT GGCAGCTTTTTTTATTTTGAA TCCATAATGAGCGTG 100 16
GII90_RS13795 2665419 .. 2665455 - -18.2  -5.79588   TGAAAATGAAAAAAA    CTCCCGCCCCTACTAT ACATG ATAGTAGGGACGAGAG    TTATACCCGTGGTGC 100 304
GII90_RS13790 NONE
        aspS 2662254 .. 2662275 -  -5.3  -2.99834   AAATCATATCACAGA           CGATT-TTGA TTT TCAAGAATCG           AACTGCAAATTCAGT  53 36
        ssrS 2661993 .. 2662011 -  -8.8   -3.2511   TTTCATCTATAAAAT             GGCTGATC CAT GAGCAGCC             GTTTTTTCTGCGCAC  71 47
GII90_RS13775 2661142 .. 2661188 - -16.2  -5.18643   TTAATGAAAAGAAAA TAAAACAAAAAAACAGCCTTGA TCA TCAAGGCTGTTTTTATGCATTA TTTATCCTTCACACG 100 23
        cymR NONE
GII90_RS13760 NONE
        mnmA 2656926 .. 2656944 -  -6.7  -5.14563   CCTTTCATTAAAAAA             CCCCAAC TCAGT GTTGAGG             TTTTTCATCTTTTAT  86 37
GII90_RS13750 NONE
GII90_RS13745 2653807 .. 2653824 -  -9.1  -6.02546   GCAAATGAAAAAAAA             CTCCCGC TTGC ACGGGAG              CATTTTATTGCTGTT 100 30
GII90_RS13740 NONE
GII90_RS13735 NONE
GII90_RS13730 2652861 .. 2652882 - -11.7  -4.74013   GGCAAACATAGAAAA           GGATACTCT TTGG AGAGTATCC            TTTTTGCATTAAAAC 100 34
GII90_RS13705 2648405 .. 2648447 - -12.9  -5.22312   AGTGACAGCAAAAAA GCCCTC-CCCCTATGCAAAC CAAC GTTTACACAGGGACGAGAGC TGTCTCGCGGTACCA 100 262
        alaS 2645726 .. 2645736 -  -3.2   -3.3217   GGCGAATTATAAAAC                 GGAT TTC ACCC                 AATCTTCTACAGAAG  48 6
GII90_RS13695 NONE
        ruvX NONE
GII90_RS13685 2644602 .. 2644623 -   -13  -5.43621   ATAAAGCAGAAAAAA           GCCGGAGC AGTATA GCTCCGGC            TTTGGTTTGGCGCGA 100 45
        mltG 2643409 .. 2643427 - -10.3  -4.75309   GGAAAGCGAACAAAA             GGAGAGC TTTTT GCTCTCC             TTTTATTTCTCATTT 100 28
GII90_RS13675 NONE
GII90_RS13670 NONE
GII90_RS13665 NONE
GII90_RS13660 2639689 .. 2639712 -  -9.7  -3.83324   TTATAAACAGGGAAA          GAAGGGAAT TCGCAC ATTCCCTTC           CTGCCTATACATAAT  85 74
        greA 2638991 .. 2639017 - -15.2  -5.61596   ATCTTCATAAAAAAA         CACCTCACCCAC ATT GTGGACGAGGTG         TTTCGCTGCTAAACA 100 45
GII90_RS13650 NONE
GII90_RS13645 2636429 .. 2636461 - -19.3  -4.19506   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT TTA ACCCGGCTGCTTTTG      TTTATTTTAGCTTTT 100 27
GII90_RS13635 NONE
        mtnN 2634650 .. 2634670 -  -7.6  -4.96848   GTTTTTAGAGAAAAA           CGGAGGAGA ACGT TCTCC-CCG            TTTTAATGAATTCGT  89 28
GII90_RS13625 NONE
GII90_RS13620 2632504 .. 2632518 -  -2.8  -3.29541   ACGACTATTATAATA               TAATCC GGC GGCTTA               CAGAGAAAGTAATTC  46 51
GII90_RS13615 2632204 .. 2632225 - -10.2  -5.21506   ACAATAACAGAAAAA           CAGCCATC TCTGAT GATGGCTG            TTTTTTTATTCGTCG 100 31
GII90_RS13600 2627866 .. 2627912 - -11.1  -5.52096   AAAGGCAATAAAAAA GGCAGCACTCAAATAACCTGTGT CAA AC-CAGGCG-TTTGAATGCTGCC TAACTTGTATGCATA 100 181
GII90_RS13595 2626693 .. 2626733 -  -9.8  -5.27335   GCGGGCAAATAAAAA CCGCAGACAAAAGAAGACA CCAA TGCCT-CTACTGCCTGCGG  GGAGTTGCGTATGTC 100 297
GII90_RS13590 2626347 .. 2626358 -  -2.2  -2.80816   CGTTGATTTACTATA                TGCA GGCG CGCA                 TTTTCTTGACAGCTA  41 133
GII90_RS13585 2626121 .. 2626143 - -13.6  -5.75342   TTTTCCGAAAAAAAA           GCAGAAAACA TAA TGTTTTCTGC           CCTCTTTCTAATGCC 100 33
GII90_RS13580 2625360 .. 2625412 -  -2.3  -6.04324   GCAAAAAATAAAAAA TTAAGAAAATATACCCAA-ATCCT AATACG AGGATCTTGGATATATTTCCCGAG AAATTTTTTATTTAA  87 33
        fatR NONE
GII90_RS13570 2621401 .. 2621423 - -16.4  -3.55866   TCATATGCAAAGCAA           TCCCGCCAAT CAG ATTGGCGGGA           TTTTATATTTTACAT 100 35
GII90_RS13540 2615496 .. 2615520 - -10.1  -6.23545   GTGAAATAAAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTATATGTGTCA 100 90
        levR 2610511 .. 2610551 -   -13  -5.79588   TTAAAACGAAAAAAA TAAACCTGTATTAAAATGG TGTT CCATTT-AATACAGGTTCA  TATGAAAAAACTGTT 100 42
GII90_RS13520 NONE
        levE NONE
        levF NONE
        levG 2607666 .. 2607676 -  -3.2  -3.40622   CACTTTCAAAAGAGA                 CTGC TGC GCAA                 GCTGGTCCGTTTCTG  48 125
        sacC 2605551 .. 2605575 - -11.5  -4.20953   TTAAAATAACAAGAA          GGCACAGAC TGTTCGG GTCTGTGCC          TTTTTTAAAATTAAG  91 36
        adhR 2602869 .. 2602902 -  -9.7  -4.42386   TCTTGATGGAGAAAA     CAGGCCAGAAACAAA ATCC TTCGTTTTTGACCTG      CCCTCTTCACACGCA  91 48
GII90_RS13450 2599587 .. 2599600 -  -3.8   -3.0636   GGACACCATACAAAT               CAGC GTAAAT GCTG                CAAGTTCAGTGTCCG  47 135
GII90_RS13445 2599437 .. 2599449 -  -2.7  -2.71731   TCCAGTCGGTAATCA                CGATT GAC AATCA                GGAAAAAGGACATGG  41 42
GII90_RS13440 NONE
GII90_RS13435 2598348 .. 2598374 - -12.4   -4.7373   TCATCGCAGCAAAAA         CCATACCAACTA TTG TTGTTGGTATGG         TTCGTCCTAGATAGG 100 77
GII90_RS13420 2595463 .. 2595483 -  -9.1  -5.28942   TACTGCAAATAAAAA            GATACCAAC ATC ATTGGTATC            TTTTAGATTGAGTTC 100 69
GII90_RS13410 2593065 .. 2593077 -  -2.7   -3.1505   ATGACTTTTGATTAA                CATAT CTT ATACG                GTGTAATAAGTTAAA  45 85
GII90_RS13405 2591497 .. 2591521 -    -8  -4.30177   TATCATATTAAGAAA         GACAAGAG-CA TGTT TGTCTCTTGTC          TTTTCCACATCGTGC  78 210
        sigZ 2589763 .. 2589793 - -10.6  -3.60098   ATGGCCTATTTTAAA       GGAATAACTGACTA TGT TCATCAGTTATTCC       TTTAAAATACGAAAG  82 19
GII90_RS13390 2588896 .. 2588906 -    -4  -2.83345   TTCATAGAGTAATCA                 TCAT TTA ATGA                 GCCATCATCTCATGG  46 19
GII90_RS13385 2588625 .. 2588654 - -14.5   -5.4492   TAGACATATAAAAAA       CCGCAAAGCTTTCT TGA AGA-AGCTTTGCGG       TTTTTGGGTCTCTTC 100 47
        aadK 2583129 .. 2583142 -  -5.3  -3.60234   GTAGACATTCTTAAA               CGTAA CGAT TTACG                CATCTTTTTACAAAC  58 108
GII90_RS13355 2582419 .. 2582455 -  -5.3   -5.9003   AAACGAACAAAAAAA    GAACATGTTTTGAAAAA AGA TTGATCAAAACATCTTC    TTATATGTTGTCATA  91 66
GII90_RS13350 2581285 .. 2581301 -  -3.7  -5.68489   GAGAATAATAAAAAA              CACTC TAATAAC GAGTG              CTGAAATGAAAAACT  85 39
GII90_RS13345 2580468 .. 2580491 - -14.6  -3.98173   GGAAATCGAATTAAA          GCGCCCTTCC TATT GGAAAGGCGC           CTGCCGTTTTACTGT 100 57
GII90_RS13340 2579950 .. 2579965 -    -4  -4.12188   GGACGATTTGTAAAA              TGATCC ATTG AGATCA               GTATTCATGATAAGG  58 147
GII90_RS13335 2578468 .. 2578492 -  -4.3  -5.88476   AAAACAAATAAAAAA          CACCGATAG GATGAAA CTATTGGTG          TTTGCAAGACATCTT  91 183
GII90_RS13330 2577823 .. 2577842 -    -8  -4.03769   ATACAATTTAAATAA            TAACGAAT TTTT ATTCGTTA             ATCAAATATTATTTA  76 286
        azlB NONE
        azlC NONE
        azlD 2576163 .. 2576175 -  -6.3  -2.58887   GTTAAATAAAAGCAT                GATCA TTT TGATC                GTTTCCGATATCGGT  54 40
        brnQ NONE
GII90_RS13305 2574369 .. 2574391 -  -6.3  -5.24989   GTATAGAGCAAAAAA           GCAAACTTC GGTAT GTAGTTTGC           TTTTTCTTCGTGATT  89 62
GII90_RS13295 2572576 .. 2572602 - -16.7  -5.59879   TATAAACATAAAAAA         GCGGAGCAAAC ACATG GTTTGCTCCGC         TACCCTAGTTTCTCT 100 80
        czcD 2571372 .. 2571383 -  -4.4  -2.79492   CCGCCAATTTCAAAT                TGTC AGTA GACA                 GAATCTGCAAAATCC  48 77
GII90_RS13285 2570273 .. 2570303 -  -4.1  -5.09895   TATTCACGCAAAAAA       TAGAGCAGTAA ACATGTGAG TTACTGCTCTG       CTTCGTTTATTCACC  74 32
GII90_RS13275 2568204 .. 2568218 -  -2.2  -2.65046   GAAAAACAATAAACC               TTCAAA CAT TTTAAA               TCCCCCACTGTCTAA  40 37
GII90_RS13270 2568021 .. 2568042 -  -8.7  -5.56372   AAAGCAAAATAAAAA           CACACCTGA ATTT TCTGGTGTG            TTTCAATAATACCCA 100 52
GII90_RS13265 2566431 .. 2566456 - -11.3  -5.02074   TCATTGTTTAAAAAA         GCCTG-GATGAA AAT TTCATCTCAGGC         TTTAAGCATCTTATT 100 71
        bltR 2563553 .. 2563567 -  -2.9  -4.25957   ACACAACAGAAACAA               TTTTC CATAT GAAAA               TCTCGTAATTTTACA  57 36
GII90_RS13245 NONE
GII90_RS13240 2562315 .. 2562336 - -11.7  -3.96681   CGAATAAAGCAATAA           GCCGATTTA ATTT TAAATCGGC            TTTATTTATCAATTA  91 165
GII90_RS13235 2561761 .. 2561771 -    -4  -2.59177   ACTCCATATATCAAT                 GAAA TCC TTTC                 TTTCATTTATTTTTA  45 28
GII90_RS13230 2561466 .. 2561488 -  -9.2  -5.00642   TAACGCATATAAAAA           TTCGTCAACC TTA GGTTGATGAA           TTTTTATCGGCTCTT 100 29
GII90_RS13225 NONE
GII90_RS13215 2560050 .. 2560075 -  -4.7  -3.35934   TTACAGACTTTATAA         GCATCAAACAG ACCG CTATTTGCCGC          AATAATCGCTACTCT  55 70
GII90_RS13205 NONE
GII90_RS13200 2558356 .. 2558378 -  -4.9  -4.34402   CCTTTCATAGGAAAA           GGGTATC TTTCTATTC GATACCC           TTTCACATTCATTAG  65 37
GII90_RS13195 2557403 .. 2557416 -  -5.3  -3.14468   TGGTACTATAGTCAA               GACTT GTCC AAGTC                ACCATTATCAAAATG  55 153
GII90_RS13190 2556229 .. 2556244 -  -6.2  -3.57039   GATGTATAACGATAA              CTAATG TTTT CATTAG               ACTGATTATCCTTTC  61 266
GII90_RS13185 2555306 .. 2555364 - -21.4  -2.96329   GGAAGGTAATAATGA TGTTTAAAAGGTGTTTTGATCCCTGTCT CAT AAACAGGGGTCAAAACACCTTTGAATCA TCGGTTTCTTTTCTG 100 378
        yrkP NONE
        yrkQ NONE
        psiE 2549774 .. 2549793 -  -8.6  -6.11392   AAACAAATAAAAAAA            CCGATGGT TTGT ACCATCGA             TCTGTTTTCTATATC 100 462
GII90_RS13150 2549307 .. 2549326 -  -6.4  -3.86481   AATAATGCAGAAGAA            GCCGGA TCTCATAC TCCGGC             TTTCTCTATTTGAAA  66 220
GII90_RS13125 2547415 .. 2547427 -  -3.4  -4.68424   CAACTGATCCAAAAA                CTTC CTTAT GAAG                AACAATCTCTTCTCT  64 173
GII90_RS13120 2546913 .. 2546929 -  -5.1  -3.87869   TGAATCCTTTACAAA              CCCTTAC GTG ACAAGGG              TTTTTGTTGTTTTTC  61 148
GII90_RS13110 2545992 .. 2546007 -  -2.6  -2.73875   CTTTTTTCAAGATGA              CTTTCA TAAT TAAAAG               GCCTCCTTTGTGAAT  41 46
GII90_RS13105 NONE
GII90_RS13100 NONE
GII90_RS13095 NONE
GII90_RS13090 NONE
GII90_RS13085 2544613 .. 2544632 -  -3.5  -3.91984   ATAGCCTTTAAAGAA            GTCCACT TTGCCG AGTGGGC             TTTTTTATTGCGCGT  55 30
GII90_RS13080 NONE
GII90_RS13075 NONE
GII90_RS13070 NONE
GII90_RS13065 NONE
GII90_RS13060 2540991 .. 2541009 -  -3.8  -3.03443   TTATCAGCAGAGACA             CGACTGCT TTA AGCACTCA             GCATCCGCTCCATTT  47 15
GII90_RS13055 2540442 .. 2540464 -  -3.3  -3.77588   AGTTCATATCAAGAA           CACTGAGGC TAAGC GCTTCGGTG           TTTTTTATTTTTAGG  52 36
GII90_RS13050 2540052 .. 2540074 -  -6.2  -2.79188   TATTCAAGTTAACTA           TGAGGAGGTT TAT AGCCTCCTCT           TTCTTATAGTTCTAC  55 138
GII90_RS13040 2539039 .. 2539060 -  -8.1  -5.33026   TAATTCAAAGAAAAA           GACTTATCC ATAT AGATAAGTC            ATGAATTCATTCTTT 100 32
GII90_RS13035 NONE
GII90_RS13030 NONE
GII90_RS13025 2536607 .. 2536634 -   -10  -5.38047   TACTTATACAAAAAA        GCTCATCCATTT TGAT AAACAGATGAGC         TTATAACTTGTTTTT 100 356
GII90_RS13020 2535845 .. 2535868 - -12.4    -3.794   GCTTAACTCACTAAA          GCGCCCTCCC GGTG GGGAAAGCGC           CTGTCGATTTATTAC  93 116
GII90_RS13015 2535370 .. 2535389 -  -8.6  -5.53436   AGAGAATATAAAAAA            GCACCTGA TTAT TCAGATGC             TTTAACGATTGCTCC 100 14
GII90_RS13010 NONE
GII90_RS13005 NONE
GII90_RS13000 NONE
GII90_RS12995 NONE
GII90_RS12990 2530068 .. 2530084 -  -6.6  -5.79595   TTTCAAAATAAAAAA              CCTCAA TTTGC TTGAGG              TTTAAATATCTTCTA  93 27
GII90_RS12985 NONE
GII90_RS12980 NONE
GII90_RS12975 NONE
GII90_RS12970 2527379 .. 2527399 -  -2.6  -3.76224   CTGTGAGTCAGTAAA            GATCGATA ACTCA TATTGATC            TCATCCGCACTTTCG  50 15
GII90_RS12965 NONE
GII90_RS12960 NONE
GII90_RS12955 NONE
GII90_RS12950 NONE
GII90_RS12945 NONE
GII90_RS12940 2523803 .. 2523824 - -11.6  -2.58861   CAGCATTTGTACAAG           CCGGAGTG TTGCAG CACTCCGG            TATTTTTTTATTTTA  81 246
GII90_RS12930 NONE
GII90_RS12925 NONE
GII90_RS12920 NONE
GII90_RS12915 NONE
GII90_RS12910 2516701 .. 2516719 -  -6.7  -5.42975   CTATATAAATAAAAA             GAGAGGT TTTAT ACCTCCC             TATCAAGCCTATAAA  93 52
GII90_RS12905 2515682 .. 2515694 -  -4.1  -3.48024   TCTCATGAGGAAACA                CCATC AGG GATAG                AATTTTTCTCAACCA  52 0
GII90_RS12900 NONE
GII90_RS12895 NONE
GII90_RS12890 NONE
GII90_RS12885 2513375 .. 2513388 -  -4.5  -2.90194   AGCTGTGTAATCATA               CAAGG ACCA CCTCG                TTATTATTGAGCGTG  48 7
GII90_RS12880 NONE
GII90_RS12875 NONE
GII90_RS12870 NONE
GII90_RS12865 2511465 .. 2511479 -  -2.8  -2.80511   TTTACAACGGAACCA               CCTCCT TTA AGGAAA               AATAAAAAAGCCCTA  42 38
GII90_RS12860 2510498 .. 2510527 -  -9.9  -5.65927   GAGGCAAATAAAAAA       GGACAGCCGGATC TTAT GAGACGGCCGTCC        CTCTAACTGAAAAGT 100 9
GII90_RS12855 2510035 .. 2510055 - -11.1  -5.82172   AGTAAGATAAAAAAA            GCCACTGGC TTA GCCAGCAGC            TTTGTCTGCGTTATT 100 14
GII90_RS12850 2509146 .. 2509172 - -12.4  -3.03755   AAATAAACATAAGTA         TCTCCTTGAGAA AGA TACTCAAGGAGA         CTATTTATTTACTTC  85 34
GII90_RS12845 NONE
GII90_RS12840 2507929 .. 2507949 - -13.3  -3.33671   AGAGTCACTTTATAA            GCCCCTCTC AAT GAGAAGGGC            TTATTTTATTTAATT  95 235
GII90_RS12805 2502334 .. 2502353 -  -2.2  -3.33298   TGCAAGCAAATAAAT            CAATTTAT TTTG ATTAATTG             TAAAACCCGCTAAAA  45 298
        arsR 2501924 .. 2501940 -  -6.7  -2.59565   AATTTGATATAATAC              CTAAAAA ATT TTTTTAG              CAGCAATCTCCTTCA  57 22
GII90_RS12795 NONE
        acr3 NONE
GII90_RS12785 2499902 .. 2499923 -  -5.9  -5.85737   ACATTAATAAAAAAA           GGACACATA TAAA TATGCATCC            TTTAACAAAAGAGTT  93 44
GII90_RS12780 2497970 .. 2497989 -  -9.2  -4.54821   ATTGTAATTACAAAA            GGGGGGTG CATA CACCCCTC             TTTAATACGTTTCAA  91 27
        nucB 2496980 .. 2496999 -  -9.3  -3.40878   AGGATTGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTTACTACTGCA  76 33
         gnd 2495086 .. 2495109 -  -8.9  -5.41746   AAGGTGCCAAAAAAA          TAAGGAGGC TTGTTG GCCCCCTTA           CTTTTTTTCTGTCGC 100 23
GII90_RS12750 2493477 .. 2493505 -    -6  -5.34857   CCAAAGAAAAGAAAA        TAACCTGAATCC GCACT GGAAACAGGTTA        TCCGTTAAATCCTGC  89 43
GII90_RS12745 2492338 .. 2492355 -  -7.7  -5.14965   ATTTTCAGCAAAAAA             CACCCCT AAAA AGAGGTG              TTTTAAAGGGCCGGT  93 210
GII90_RS12735 NONE
        yqeH NONE
GII90_RS12725 NONE
        yhbY NONE
GII90_RS12715 NONE
GII90_RS12710 NONE
        rsfS NONE
GII90_RS12700 2486713 .. 2486734 - -11.7  -5.07053   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGATTTCTGCG 100 12
       comEA NONE
GII90_RS12685 NONE
GII90_RS12680 2482009 .. 2482023 -  -2.8  -5.42259   TGATTTTGAAAAAAA               CGTTCA AAG CAAACG               AAATGATGCTGTAGA  79 165
GII90_RS12670 NONE
        holA 2480710 .. 2480731 -  -8.7   -5.1523   TGCATAATATAAAAA           CGATCCTCA ATAA TGGGGATCG            TTTTTTTCATTTCTT 100 10
         gpr NONE
GII90_RS12650 NONE
GII90_RS12645 2477455 .. 2477467 -  -4.1  -4.68601   ATGTAAAACAAGAAA                GAGAA AAG TTCCC                TATCATATCTGGGTT  66 60
        lepA 2475504 .. 2475524 - -12.6  -4.14627   TCTTTACAGAAAGAA            GCCGCAGT ACAAG ACTGCGGC            GGCTTCTATTGTTTT  95 31
        hemW NONE
        hrcA 2473183 .. 2473203 - -11.9   -2.7728   CTCAAAGTGTAAGGA            GAAGGACAG GTG CTGCCCTTC            GATAAAATTTGCCAA  84 48
        grpE NONE
        dnaK 2470626 .. 2470654 - -10.4   -5.7946   CGGGCAAGAAAAAAA        GTCAAAGCCAAG AGATG CCTGACTTTGAC        TTTCTAATCATTGAA 100 103
        dnaJ 2469410 .. 2469423 -  -2.3  -2.72459   CATCCAATAATTAAT               CGCCT TTAA ACGCG                CGTTTTACCTTGTCA  40 7
        prmA NONE
GII90_RS12605 NONE
        mtaB 2466266 .. 2466287 -  -9.5  -5.95539   GGCTAAATAAAAAAA           TCGGTACAT TTTA ATGCACCGA            TTTTTTAGGTTAAGA 100 35
        rpsU NONE
GII90_RS12585 2464493 .. 2464515 - -11.4  -5.64274   TTATGTATAAAAAAA           GACATCTCTC TTA GAAAGATGTC           CTTTTCTTTGCCATT 100 40
GII90_RS12580 NONE
        floA NONE
GII90_RS12570 2461576 .. 2461617 - -13.9  -4.96848   TGCCCCATACAAAAA GAACCCCCTTTCATCTCAT ATGT ATGATTTGAAAGGAGGTTC  TAACACTTTAATTTT 100 33
        yqfC NONE
        yqfD NONE
GII90_RS12555 2459083 .. 2459108 -  -9.1  -5.00765   AAGCAATCATAAAAA         TGACCCGAT AACGCGCG ATCGGGTCA          TTCAGCATTAATTTT 100 33
        pgpH NONE
        ybeY NONE
GII90_RS12540 NONE
GII90_RS12535 NONE
GII90_RS12530 NONE
GII90_RS12525 NONE
        recO 2453323 .. 2453365 - -17.9  -5.30155   GCAGCAACCAAAAAA CTCCCGTCTCTATGCTTGC CAGCC GCAAACATAGGGACGAGAG TTCTCCCGCGGTTCC 100 226
        glyQ NONE
        glyS 2450312 .. 2450339 -  -4.1  -4.18161   TATAAATGGGGAAAA        GACGATTACCG ATCACA CAGCAACCGCC         TTTTCTCTCTTTATT  61 36
        ccpN NONE
        ppsR 2448720 .. 2448740 -  -4.7  -4.70659   TGGCACAGCCAAAAA            CCCAGGA TAGAGCG TCCTGAG            TTATATGTTTTTTGT  71 26
GII90_RS12495 NONE
GII90_RS12490 NONE
        rpoD 2444804 .. 2444833 -  -8.7  -5.40474   ATCTTTTTAAAAAAA       GA-AGAACGGATCT TCA AGACCCGTTCCATC       TTATTCAAGGAAATC 100 26
        cccA 2444088 .. 2444112 -  -9.9   -5.2853   CAGTCAAAAATAAAA          GGCTGTCGAGA ACA TCTCGGCGGCC          TGTGAATGTATAAAG 100 56
GII90_RS12475 NONE
GII90_RS12470 2442096 .. 2442116 - -11.2  -5.48054   AGTAAAAGCAAAAAA            CTGAGGCT GTAAA AGCCTCAG            TTTTTTTATAGAAAT 100 31
        cshB 2438795 .. 2438806 -  -2.2  -3.15544   GCCTATTCTCAGCAA                CAGG TTCC CCTA                 CTTTCTTTTCTTAGA  43 23
GII90_RS12450 2437879 .. 2437896 -  -8.4   -5.1925   TTACAAGCTAAAAAA             TGGGGG TGTTAT CCCCCA              TTTTTTATTGCTGTA 100 30
GII90_RS12440 2436537 .. 2436571 -    -8  -4.76041   CACATGTATGAAAAA    GAAAATGGC-AGCTG TCTGTC CAGCAAGCCATTTTC     TTTACTGCAGATAAA  88 77
         zur 2436002 .. 2436036 - -14.4  -3.63341   AATACGCGTCAATAA     CTGAAAAAGGAGCCCA AAC CGGGCCCCTTTTTCAT     ATATACGCATTTTAC 100 37
GII90_RS12425 2434871 .. 2434892 - -14.5  -5.28414   GAAGAAACACAAAAA           GCTTGACGG GAAC CCGTCAAGC            TTTTTTGTGTTAGAA 100 35
        yqgA 2432526 .. 2432550 -   -10  -4.65895   GTTGCTATTTAAAAA          GCCAGGTACC AATAG GGCACCTAGC          TTTCAGAATTAAATC  91 91
GII90_RS12400 2430696 .. 2430712 -  -4.4  -2.80354   TATATGTACTGAAAT             GC-CGCT TCAC AGCGAGC              CTTTCTTCATTCAAT  48 154
GII90_RS12395 2430021 .. 2430044 - -10.4  -5.80248   GAAGACATAAAAAAA          CAAGGTCC-CA TAA TGAGGACCTTG          TTTGTGCCATTATTT 100 35
GII90_RS12390 2428573 .. 2428592 -  -5.7  -5.05113   TTTACAGAAAGAAAA            GACACTC AAGTAA GAGTGCC             AGTTTTCATTTTAAA  78 88
GII90_RS12385 2426365 .. 2426383 -   -11  -5.93809   TTTGTATAAAAAAAA             CGCCCACA TCA TGTGAGCG             TTTTTTTTTAGTTAT 100 33
        pstS NONE
        pstC NONE
        pstA NONE
GII90_RS12365 NONE
GII90_RS12360 2421806 .. 2421822 - -12.3  -5.70829   AACACGATAAAAAAA              CAGGCTG ACT CAGCCTG              TTTTTTTCATCCAAA 100 32
GII90_RS12345 NONE
GII90_RS12340 2419228 .. 2419239 -  -2.2  -3.37912   GACTTATATATAATA                CCAC TATA ATGG                 ACGGAATGCTAGGCT  45 46
        rpmG 2418971 .. 2418996 - -10.5  -5.80817   CGGAATAGAAAAAAA         GCCAGAACCTT TTTC AAAGCTCTGGC          TTTTTTCTTACACCT 100 56
GII90_RS12330 NONE
GII90_RS12325 2418120 .. 2418136 -    -8  -5.38497   ACTGAAAGCAAAAAA              TCCCGT TTTTC ACGGGA              TTTTAGAAAGCTTGC  95 28
        glpG 2416488 .. 2416505 -  -4.8  -3.53566   AGTCAAGAAGAAAAC             GCTGAC AAAAAA GCCAGC              TTCCTTTCCATATTC  57 46
GII90_RS12315 NONE
GII90_RS12310 2415176 .. 2415186 -  -2.6  -3.94333   CATTAACACATCAAA                 TTAA ATC TTAA                 CCTGAGCACAACAAA  52 64
GII90_RS12305 2413157 .. 2413184 - -10.6  -5.21683   ATTTAAAAAAAGAAA        GCCTCCCGC-TCA CTT CGATGCGGGAGAC        ATTGTGATTATGATG 100 33
GII90_RS12300 2411966 .. 2411976 -    -4  -5.24129   CTTCGGCAGAAAAAA                 GAAA AAG TTTC                 AGTTACTCATGAAAA  74 28
GII90_RS12295 NONE
GII90_RS12290 2410510 .. 2410531 - -13.1  -4.35518   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATGGCT 100 33
GII90_RS12280 2409512 .. 2409536 -   -13  -4.03204   CATTAAATGCAGAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA  95 31
        mgsR 2408598 .. 2408637 -   -13  -4.66953   TGAACAGGTGAAAAA  CCGAAGATAAGCTGATTC GTAT AAATCAGCGGATCTTCGG   TTTTTCATCATGCAG 100 33
       rsbRD 2407524 .. 2407552 -  -9.6  -5.20154   ATAGAAGTTAAAAAA        GCTGAATAGCCC GTGAA AGGCTGTTCAGC        TGCTATCTTTCAAGA 100 58
        corA 2404871 .. 2404893 - -14.2  -5.72622   CCTATAAATAAAAAA           GCAGACATGG TCA CCATGCCTGC           TAGATTCCATTTTCA 100 240
       comGA NONE
       comGB NONE
       comGC NONE
       comGD NONE
       comGE NONE
       comGF NONE
       comGG NONE
GII90_RS12210 2400277 .. 2400298 -  -2.9  -6.00814   AAGAAGCAAAAAAAA           GGTACCCGC TCGC ACAGGTACT            GTTCAAACAAAAAGT 100 233
        tapA NONE
GII90_RS12195 2398524 .. 2398535 -  -5.8  -3.71378   GATTTTATATCGAAA                CCTG TTGC CAGG                 TTTACAACTGAAGTT  63 39
        tasA 2397649 .. 2397686 - -17.1  -2.93073   TTTTGTCAATAACCA   TCGAGACGGCCCAGTAT ATGA ATACTGGGCCGTCTCTT    TTTTTTGCTGTTATT 100 39
        gcvT NONE
GII90_RS12160 NONE
GII90_RS12155 2390001 .. 2390021 - -14.1  -4.30977   AAGAAATAAAGCAAA            CAGCTGTCT GGT AGACAGCTG            TTTTTATTTATCTTT 100 33
        lipM 2388547 .. 2388560 -  -2.4  -3.43071   GTTTACACTAATGAA               CTTG AAAAAA CAAG                GATGCTCCGCGGGTC  45 52
        mntR 2388034 .. 2388055 - -10.1  -5.15634   CAGCGTATCAAAAAA           GACGGCCTC CTTC GAGACCGCC            TTTTTACTGATTATG 100 29
GII90_RS12135 2386997 .. 2387012 -  -2.5   -5.7946   TTCTCAAGAAAAAAA              GCCAG ACTCAG CTGAC               TGTTATAGAAGGGAA  93 71
GII90_RS12120 2384860 .. 2384878 -  -7.5  -5.08824   TTCTCATGTAAAAAA             TGTTCAC TTCTC GTGAACA             TTTTATCATACTGGA  93 54
        aroQ NONE
        papA 2383319 .. 2383338 -  -2.2  -2.74563   CCTATATTCCAATCA            CAAAATAA TAAG TTCTTTTG             GGGAATGGGTGATTG  40 3
         efp 2382696 .. 2382719 -   -11  -5.60993   TTGGGCACAAAAAAA          GCCTGCTCCC ATTT GGGAACAGAC           TTCTTTTTTTCTTTC 100 40
GII90_RS12100 NONE
    spoIIIAA NONE
GII90_RS12090 NONE
    spoIIIAC NONE
    spoIIIAD 2380130 .. 2380144 -  -3.6  -2.84272   CAAAAGCAAAACCCA               TTGAAA GCG CTTCAA               TCTACCGCCTCCTTT  46 44
    spoIIIAE NONE
    spoIIIAF NONE
    spoIIIAG NONE
    spoIIIAH 2376938 .. 2376956 - -11.7  -4.76892   ACAGCAACGCAAAAA             GCCCGCT TGTTT AGCGGGC             TTTTTTCCCTCATTC 100 41
        accB NONE
        accC NONE
        yqhY 2374506 .. 2374528 -    -7  -5.43866   TAACGTGTAAAAAAA           CCAAAGGG CCGCCCT CCCCTTGG           TTTCGTGTTAAGCCA 100 42
        nusB NONE
        folD NONE
GII90_RS12030 NONE
GII90_RS12025 NONE
GII90_RS12020 2370227 .. 2370241 -  -6.4  -4.42386   CCTGTATTGATAAAA               GATCCA AAG CGGATC               AACTCACTTTCAGCA  76 192
GII90_RS12015 NONE
GII90_RS12010 2367473 .. 2367496 - -11.2  -5.31456   TGAATGCAGAAAAAA          GGAATAATAG CGCC CTATTATTCC           GGTACATCTGCTTTT 100 19
        argR NONE
        recN 2365154 .. 2365178 - -14.4  -5.52384   TGTGCACGAAAAAAA          TAAGCTGCGC TTCTC GCGCAGCTTA          CCCAGTTGTTTTGAC 100 23
      spoIVB 2363702 .. 2363720 - -14.6  -6.11229   ATCAAAATAAAAAAA             CTGCCGGA AAC TCCGGCAG             TCAGCTTGCTTTTTC 100 26
       spo0A 2362570 .. 2362609 -  -8.8  -5.07652   GTCCCCAAAACAAAA  CGCCTCCTATTTATCAGC GCAA ACTAATAAATAAAAGACG   TTTGATTTAATGACC 100 58
GII90_RS11975 NONE
GII90_RS11970 NONE
GII90_RS11965 2358756 .. 2358778 -  -7.7  -5.32565   GAATGAATGAAAAAA           GAAGGCTGC GTCAA ACAGCCTCC           TTCTAACAACTATTC  95 35
GII90_RS11960 NONE
GII90_RS11955 2356588 .. 2356601 -  -5.3  -3.08679   CCCCCGGATGGAATA               GACTT CAGG AAGTC                TTCTCCTCATAGTCA  53 16
GII90_RS11950 NONE
        mmgD NONE
GII90_RS11940 NONE
        prpB 2351886 .. 2351903 - -12.7  -5.45726   GATAGCTGAAAAAAA             GCCGGAG AATG CTCCGGC              TTTTTTTGTTGCATT 100 39
GII90_RS11925 NONE
        yqiS NONE
GII90_RS11915 NONE
GII90_RS11910 NONE
        lpdA 2344734 .. 2344744 -  -6.8  -3.80855   GCTTTTAAAAATGAA                 TGGC TTT GCCA                 TCTGCGGCAAGCGCA  66 4
      bfmBAA NONE
GII90_RS11895 NONE
       bfmBB 2341369 .. 2341403 - -14.6  -5.06585   TAAAGCATAGAAAAA     GAGCATTTTTTGAAAC AAA ACTTCAAAAAATGCTC     TTTTTGCTTATTTAG 100 37
        brxB 2337650 .. 2337673 -  -7.4  -5.64274   TTATGCACAAAAAAA          CCCGGGCTGCT TTG AGCATCC-GGG          TTGTTCGTCTTATAC 100 35
        artP 2336618 .. 2336639 - -10.2  -5.10461   CCTATTCAATAAAAA           GGCTCAAC GAAAAA GTTGAGCC            GCTTTTTTTTACTTC 100 34
        artQ NONE
        artR 2335160 .. 2335181 -  -5.2   -5.4505   TTCTTCAATAAAAAA           GAAG-AGGC GGCCA GCCTTCTTC           TTTTTTATATTCTAT  88 37
GII90_RS11850 2334098 .. 2334151 -  -7.1  -5.64304   GAACATAAGAAAAAA CGCATAAGCTCCTCCTTTTTCATTAG GTTGA CCAATGAA---GGAAGAGCTCATGCG AATCATCCGAGTGAT 100 28
GII90_RS11845 2333536 .. 2333555 -  -2.9  -3.15544   CTGTACTCTCAGGAA            TCGTCAT GTTTCT ATAACGA             TAAAAAAGCAGGCGC  45 42
         mce NONE
GII90_RS11830 2331438 .. 2331450 -  -7.7  -2.89602   CCCTCCATATTAAAG                CGGTA TGT TACCG                TGCTTTTTTTTCGGT  64 7
GII90_RS11825 2330264 .. 2330274 -  -8.2  -5.47821   ATGGAGCTAAAAAAA                 CCCG ATG CGGG                 AAATCGCACTCGGGT 100 50
GII90_RS11805 2326819 .. 2326829 -  -2.6  -4.17023   TTAATCATTTTAAAA                 TTTA AAT TAAA                 ATAAAATGATATTTA  55 84
        gndA 2325333 .. 2325358 - -15.5  -4.89477   TCCTTAATAACAAAA         CCCCCAAAGCT TAAG AGCTTCGGGGG          TTTCTATTGATTACT 100 36
GII90_RS11790 2322362 .. 2322387 -  -4.7  -5.54192   ATTAACGTAAAAAAA         GACCGGG CCGTAAGGGATT CCCGGTC          TTTTATATTATTTTG  88 265
GII90_RS11770 2318624 .. 2318644 - -14.1  -4.98857   ATGTAAGGACAAAAA            CAGAAGGCA CAG TGCCTTCTG            TTTTTTATTTTTCCC 100 30
GII90_RS11760 NONE
GII90_RS11755 2315527 .. 2315556 -  -2.2  -2.55378   AAGCAGAGCATGAAG       GACTTCTGAATG AACTGA CATTCAACAATC        TCTCCCTTCCACTAT  40 92
        dsdA 2314160 .. 2314180 -  -6.9  -4.13767   CTCTGTAGGTTAAAA            CCCTTACAA AGA TTGTAACGG            AAAACCTTTTCACTG  73 46
        coaA NONE
GII90_RS11740 2312583 .. 2312605 -  -9.9  -5.63517   GCTTTAAATAAAAAA           CGGAAGAGA ATGAA TCTCTCCCG           CAAACATGAGGTGAA 100 200
GII90_RS11725 NONE
GII90_RS11720 2308718 .. 2308730 -  -3.5  -3.28712   CTCTTTTTCTCACAA                TATAA AAA TTATA                TTTTGCCTGGCTGGA  47 143
GII90_RS11715 NONE
GII90_RS11710 NONE
GII90_RS11705 NONE
GII90_RS11700 NONE
GII90_RS11695 2306207 .. 2306232 -  -9.8  -5.64304   CAACAGAATAAAAAA         GCGAAAG-GCC TCTTC GGCTCTTTCGC         TTTTTTATGTTACAG 100 35
GII90_RS11685 2304876 .. 2304897 - -11.6  -4.95155   CTCATAGCAGAAAAA           CCAGCACC TGTACG GGTGCTGG            TTTATTTATATTGAT 100 27
GII90_RS11670 NONE
GII90_RS11665 2301811 .. 2301856 -  -9.1  -4.99043   CCGCGAGAAACAAAA GCAGACTGCTCCTCA-GGCCA TAGAAT TGGCCACGTGGAGCAGCCT-C GACTTTACCATTTCT  93 139
        ansA NONE
        aspA 2298915 .. 2298952 - -10.2  -3.55444   TCCCTATGTTGTAAA  CAGCTTATTCA--TCCGA CTAT TCGGAGATGAATAAGCTG   TATTTTATACAAATT  80 41
        mleN NONE
GII90_RS11640 2296049 .. 2296072 - -13.2  -5.89921   ATGATAAGAAAAAAA          CAGCACCTGC TACG ACAGGTGCTG           TTTAGCTACATTTAT 100 37
GII90_RS11635 NONE
      spoIIM NONE
         fur 2294424 .. 2294444 -  -8.3  -5.34055   AGAAACAGCAAAAAA            CCCTTTCCC CAT GAGAAAAGG            TTCGCGCTCGGCACC 100 43
GII90_RS11620 NONE
        xerD 2293195 .. 2293212 - -12.7  -5.63517   GCTCTAAACAAAAAA             GCCGCAG CCAC CTGCGGC              TATGCTCGCGGATGA 100 25
        deoB NONE
GII90_RS11605 2290985 .. 2291014 - -12.3  -5.60993   TTGGGCATAAAAAAA       GACAGCTGTGT GATATCAG ACACAGCTGTC        TTTTGGTCCTGCATT 100 50
GII90_RS11600 2289672 .. 2289683 -    -3  -3.06183   TCGATTTCGACGGAA                TGAA TTCC TTCA                 CCGTGACAAAACTAG  43 57
     spoIIAA NONE
     spoIIAB 2288836 .. 2288847 -    -3   -2.7186   AAATCTCCTTAATTA                CAAA GCGC TTTG                 CTTTTTGATAAGTGC  41 7
        sigF 2288032 .. 2288054 - -14.2  -5.24129   CTTTTGCACAAAAAA           GCTAGCCTGC ACT GCAGACTAGC           CATCCGTATGATCCA 100 21
      spoVAA 2287310 .. 2287322 -  -3.4  -2.64704   GAACAATACACTAAC                GATC ATGCA GATC                CTTTATGGTTTCTTG  43 8
      spoVAB NONE
      spoVAC NONE
      spoVAD 2285402 .. 2285414 -  -3.4  -3.20078   TAGTCCATATTAAGA                TGCA CCTCC TGCA                CGCTCAAATACAACC  47 7
      spoVAE NONE
     spoVAEA NONE
      spoVAF 2282921 .. 2282941 -  -6.9  -3.76224   CGCTTATGGATGAAA            GGACAGT TTTATGG ACTGTCC            CTTCATAATTAAGAC  69 77
        lysA 2281544 .. 2281561 - -12.7    -5.011   ATTCAAATAAGAAAA             GCGCCGA AAAA TCGGCGC              TTTCTTTTATTGCTT 100 32
GII90_RS11535 2279946 .. 2279966 - -14.1   -5.7946   TGGCCAATAAAAAAA            GCTTCCTCT CTA AGAGGAAGC            CTTTTGCCTGCCGAT 100 40
GII90_RS11525 2278436 .. 2278449 -  -5.3  -6.08342   TAATAAACAAAAAAA               TGCAA CAGT TTGCA                GACGCGTCTTGTGAG  95 340
GII90_RS11520 2277550 .. 2277560 -  -3.2  -5.86332   CGAATCGAAAAAAAA                 TCCC ATT AGGA                 CCATTGAAGTGATTT  88 402
        lepB 2276910 .. 2276930 -  -6.8  -5.82281   AAAGATATAAAAAAA            GCAGCCCC AATGG GAAGCTGC            TTGATCCTAATTTGT  93 32
GII90_RS11505 2276322 .. 2276358 - -16.1  -4.88388   ACAATTTGAGAAAAA    CAAAACATCACCCTTCG ATC CGAAAGGTGATGTTTTT    TAATCATTCACTTTT 100 25
        ribD NONE
        ribE NONE
GII90_RS11490 NONE
        ribH NONE
        ribT 2272002 .. 2272025 - -13.2  -5.97575   AACGCAGAAAAAAAA          GCAGAGACTG ATCA CAGCCTCTGC           TTAATTATTGTATGA 100 26
        scpA NONE
        scpB NONE
GII90_RS11460 2269248 .. 2269268 - -11.2  -5.88197   GCAAACATAAAAAAA            CTCTCCCT GAAAA AGGGAGAG            TAAACGTTATCTGAT 100 32
GII90_RS11455 NONE
        spmA NONE
        spmB 2266877 .. 2266891 -  -4.2  -5.89947   CAAATCTAAAAAAAA               CGCC GTTTTCA GGCG               CTCCCAAATAATAAC  91 19
        rluB NONE
        resA NONE
        resB NONE
        resC NONE
        resD NONE
        resE 2259973 .. 2259993 - -12.6  -5.52384   TGGCTATTAAAAAAA            CACCCGCT CAGTC AGCGGGTG            TTTCTTATGGAACAA 100 68
        sigX NONE
        rsiX 2258187 .. 2258202 -  -6.1  -5.31059   ATAGCAACTAAAAAA              GAGCC TTAAAG GGCTC               TTTTTAGTTTAAGGA  89 29
GII90_RS11400 2257294 .. 2257313 - -10.8  -5.68023   CCATAATTAAAAAAA            CTCAAGCT ATAT AGCTTGAG             TTTTTTTATTGTTCT 100 39
        fmnP 2254614 .. 2254629 - -10.4  -5.66868   AAGTAACTAAAAAAA              GCTCCC GAAC GGGAGC               TTTTTTATTTAATGG 100 34
GII90_RS11380 NONE
GII90_RS11375 NONE
GII90_RS11370 NONE
GII90_RS11365 NONE
GII90_RS11360 2249675 .. 2249686 -    -3  -3.29144   CCATTCTTTTTAGAA                CTTA TCAA TAAG                 ACGGACAATAAAAAA  46 74
GII90_RS11355 2248744 .. 2248763 -  -6.6  -4.04206   CTACTTGCACACAAA            TCATATAA CACA TTATATGA             GATGATGAGTCATAG  70 132
GII90_RS11350 2248096 .. 2248111 -    -9  -5.95166   TTTAACGAAAAAAAA              CTGCTG AAAT CAGCAG               TTTTCCGTTGCATTC 100 41
        gudB 2246648 .. 2246669 -  -7.4   -5.7946   TTCCGAATAAAAAAA           TCTCCTAT TTTATC ATAGGAGA            TTTTTTATTTTTATG 100 53
        ypdA 2245582 .. 2245606 -  -9.4  -5.86609   TTAAAAAAACAAAAA          GAGCATACGA ATGCA TCATATGCTC          CTCATCTTTAATGGT 100 33
        prsW 2244815 .. 2244835 - -12.5  -5.37043   ACTGCACACAAAAAA            GCCGCACGG TTG CTGTGCGGC            TTCTATACTTGCATC 100 28
        sleB NONE
        ypeB 2242364 .. 2242386 -  -8.5  -5.64006   ACGTAATGAAAAAAA           GGAAAAGAC ATTTA GTCCTTTCC           TCCTGTTTTTATAGG 100 34
        dgrA NONE
GII90_RS11315 2241433 .. 2241449 -  -3.7  -2.73203   TGATGAATAATTAAT              GTTTGAA GGT TTCAATC              CTATTGTTTTCCTCC  45 4
GII90_RS11310 2240543 .. 2240567 -  -9.5  -4.01902   ATATGTATTAAAGAA          TCATCCAAAAA AGT TTTTTGAATGA          TCAATAAAAAGTTTT  85 133
        rpsA NONE
GII90_RS11300 2238198 .. 2238222 -  -9.4  -5.16133   ATCATAATACAAAAA         GCCC-AAACCA CATA TGGTTTTGGGC          TTTTATCATTTATCG 100 35
GII90_RS11290 NONE
GII90_RS11285 NONE
GII90_RS11280 2236238 .. 2236253 -    -9  -4.72007   TTTTATGAAAAGAAA              CCCTTC AGAG GAAGGG               CTTAACTCATTTATT 100 72
        engA NONE
        gpsA 2233551 .. 2233580 -  -9.4   -5.9218   GATAGAACAAAAAAA       CTGAAGCAAAGA GGGGGA CCTTCGCTTCAG        TCAACTTGACTATAT 100 226
GII90_RS11265 NONE
GII90_RS11260 2232450 .. 2232482 -  -9.3  -5.82172   ATTAATATAAAAAAA      CCTTTCTCCCT ATTTGTATGCA AGGGAGAAAGG      TTCATTCCTTTTTCA 100 27
      spoIVA 2230793 .. 2230816 -  -3.2  -5.69793   AGAGCAAAGAAAAAA          GACCTC-CCAT TCT ATAAAGAGGTC          TACCGGTATTACAGG  84 34
         hbs 2230091 .. 2230119 - -14.7  -3.34715   CATGCTCTTGAAATA        TGAAAAGCCCCTT AGA AAGGGGCTTTTCT        GTGAAGAAATAAAGT 100 79
        folE NONE
        mtrB 2229149 .. 2229163 -  -2.7  -3.01924   CATTTGCTTTTAACA               GCGGG GACAG CCAGC               TTATTTTTTTTCGCT  43 26
GII90_RS11235 NONE
        menG NONE
GII90_RS11225 2226514 .. 2226524 -  -6.8  -3.48064   CTGATAATTAATCAA                 TCCG GGG CGGA                 GAAATTTCTTAATAT  64 50
GII90_RS11220 2225828 .. 2225843 -  -7.6   -5.7946   GTTTCAATAAAAAAA              TCAGCT TTTC AGCTGA               TTTTAGATCGTTGGG 100 166
        cheR 2224957 .. 2224970 -  -2.5  -3.21036   GACTACTATAACATA               TTTTT CAGC AAAAA                GTCAGTCTATCTTTT  45 32
        aroC NONE
GII90_RS11205 NONE
        aroH 2222118 .. 2222141 - -12.6  -4.76087   TATATAACAAATAAA          CCCAAAAGAA AGAC TTCTTTTGGG           TAGAATAAACATAAT 100 146
GII90_RS11195 NONE
        trpD NONE
        trpC NONE
GII90_RS11180 NONE
        trpB NONE
GII90_RS11170 NONE
GII90_RS11165 2215021 .. 2215041 -  -9.8  -3.88498   GGTTTATAGACTAAA            GAGGTGAT ATTTG ATCACCTC            TTATAAAATTTCAGC  85 26
GII90_RS11160 NONE
        aroA 2212566 .. 2212586 - -12.7    -5.252   GATCTGCATAAAAAA            TCCTGAAGT AAA ACTTCAGGA            TTTTTTCGAAAGCTT 100 20
GII90_RS11150 NONE
GII90_RS11145 2210333 .. 2210354 - -10.9  -3.65046   CCTTTACGGCAACAA           GCCTTGCAA TTCA CTGCAAGGC            TGGTCATATTATGTG  88 34
GII90_RS11140 NONE
GII90_RS11135 NONE
        qcrB NONE
GII90_RS11125 2207675 .. 2207691 -    -8  -5.36441   TGTCCATATAAAAAA              GCTGAC GCCGG GTCAGC              TTTTGATAATAAAAG  95 72
GII90_RS11120 NONE
        ypjB 2206146 .. 2206162 - -10.8  -5.48063   ATGTAATAGAAAAAA              GGCGGC TGACC GCCGCC              CCTCATCCTTATTTA 100 34
GII90_RS11105 NONE
GII90_RS11100 2203942 .. 2203953 -    -3   -2.8372   CATGCGCGATCAAAG                CAAT TTTC ATTG                 TTTATCCCCCCGTCT  42 39
        mgsA NONE
       bshB1 NONE
GII90_RS11085 NONE
GII90_RS11080 NONE
GII90_RS11075 2199360 .. 2199380 -  -6.2  -5.15969   CTGCAAGCCAAAAAA           CCTTC-CGT TACA ACGAGAAGG            ATTCTTCACTTTCTA  83 190
        panB NONE
        panC NONE
        panD 2197195 .. 2197210 -  -7.5  -5.10163   AATCTTAAAAGAAAA              CCCCC GATAAA GGGGG               CTTTTCTTCTACAAA  93 34
        dinG 2194281 .. 2194295 -  -8.5  -4.16943   TCCCACACCGCAAAA               GCCGC TTTAT GCGGC               TTTTATTCTTTTTCC  79 28
GII90_RS11050 NONE
GII90_RS11045 NONE
        aspB 2192256 .. 2192275 -  -6.4  -5.00642   CAATGCAGATAAAAA            GCGGCT TTTCTGTC AGCCGC             TTTTTGATCTGTTAG  82 37
        asnS 2190809 .. 2190826 -  -7.7  -4.62069   CCTTTACTGTAAAAA             GTCTCCC TTGC AGGAGAC              TCTTTTTTGTTTCAT  84 50
        dnaD NONE
         nth NONE
GII90_RS11020 2188869 .. 2188888 -   -10  -5.60689   GTACACAATAAAAAA            CCTCCCGT TTTA ACAGGAGG             TTTTATCGATTCATC 100 28
GII90_RS11005 2184402 .. 2184424 -   -15  -3.05384   CGCCCTTCTACGTAA           GAAGCAAGGA ATT TCCTTGCTTC           TTTATTTTTTCAGCC 100 27
GII90_RS10995 2183856 .. 2183866 -  -2.4  -2.71325   TCACTCACAAATTCA                 GCCG ATG CGGT                 ATACCTTCTCAAACG  40 12
GII90_RS10990 2183418 .. 2183455 - -10.1  -4.82901   GGCCCCCTATAAAAA   CGAAAAGAAGACAGCC TTTTACC GGCTGTCTTCTCTT-G   CAATTTCATCCTTTA 100 6
GII90_RS10980 2182611 .. 2182641 - -12.8  -5.00616   TTTCTTTCCAAAAAA       TAAGCATGAATGAA CGA TTCATTCATGCTTC       TATCATTTAAAAAAG 100 28
GII90_RS10970 2181542 .. 2181559 -  -9.1  -5.80364   AGTTGAATAAAAAAA             GCAAGGC ATAC GCCCTGC              TTATTTCGCTTTTAT 100 26
GII90_RS10965 NONE
GII90_RS10960 2177955 .. 2177969 -  -8.6   -3.1855   CCGGGGAATATTTAA               GAGGAA TAT TTCCTC               TTTAGCCGGGCAATT  71 7
GII90_RS10955 NONE
        cotD NONE
GII90_RS10945 NONE
        gpsB 2176353 .. 2176363 -  -2.6  -3.46509   CGTTAAGAACATGAA                 TTAT TAT ATAA                 CAACTGATTACAATT  46 68
        rnpB 2175904 .. 2175924 -  -8.3  -4.66537   CTTTTCAAGATAAAA            GCTCTCC TTATACG GGAGAGC            TTGTTTTCATCATTT  88 61
GII90_RS10930 2174676 .. 2174698 -  -9.2  -4.00532   GGCTGAAAGATGAAA           GAAGACGC ATGCAGA GCGTCTTC           TTTTTATGCGTTTTC  85 29
GII90_RS10920 2174116 .. 2174130 -   -10  -5.64304   GAATACAATAAAAAA               CTTGGC AAT GCCAAG               TTTTTTGCAGTTTAC 100 37
GII90_RS10915 2172086 .. 2172105 - -12.2  -5.72622   CTGACAAATAAAAAA            GCTGACGA ACGA TCGTCAGC             TTTTTTCCATTACAT 100 35
        kdgR NONE
GII90_RS10895 NONE
GII90_RS10890 NONE
        kdgT 2166566 .. 2166591 -  -4.7  -4.37092   ATTGTTTGTATAAAA         GGCTGCC GGTATGTTTTGT GGCAGCC          TTTTTATTCAGTTGA  68 33
        ypwA 2164683 .. 2164715 - -12.1  -5.89921   ATGAGAATAAAAAAA      GCATTGCCCGCTC AAATAAA GAGCAAGCAATGC      TGATATCACAAAAAA 100 292
         xpt NONE
        pbuX 2162738 .. 2162753 - -10.4  -5.83822   TATATGCAAAAAAAA              CTCCGC CGCG GCGGAG               TTAGACTGCTGTTTT 100 26
GII90_RS10865 NONE
        bpsB 2161061 .. 2161071 -    -4  -2.58427   AACATGGTTGAGAAT                 GATT TTC AATC                 GCTATTTTACGCTGT  45 27
        fbpC 2160853 .. 2160869 -  -7.9   -5.5208   GGAGAATAGAAAAAA              GCCGCCA TTA CGGCAGC              TTCTATAAAAGAAAA 100 69
        dynA NONE
GII90_RS10845 NONE
GII90_RS10840 2156575 .. 2156600 - -10.6  -5.93252   CCCAAAAATAAAAAA         CAGTATCTCT TTAATT AGAGATACTG          TTTGAATATTTATCA 100 38
GII90_RS10835 2155609 .. 2155640 - -12.5  -4.77629   AAAAGCAATACAAAA      CGCTAGAGAGGATC TAAAC GATC-TCTCTAGCG      TTCAGCTTTTCAAGC 100 7
GII90_RS10815 NONE
GII90_RS10810 2153389 .. 2153415 - -16.8  -4.02051   GATGAATTCAAAGAA         TAAAAACCGCAG CTT CTGCGGTTTTTA         TTTTTAGTGATTGGT 100 29
        degR 2152765 .. 2152784 - -13.6  -3.37299   GAGATGACAAATAGA            GGAGAGGC ATTC GCCTCTCC             TATTTGATTTTCATC 100 25
GII90_RS10775 NONE
        hdhQ NONE
GII90_RS10765 2147309 .. 2147361 -  -9.4   -4.8543   TAATTTTTATAAAAA GTGAATTCACATAAAAAAGGTGCA TGATC TGCACCTTTTTTATCTTTATTCGC CTTTTTTTCTGCTTT 100 18
        ilvD 2145290 .. 2145338 -  -9.2  -5.72616   ATTGACATAAAAAAA GCCCCCTC--TAGTATCCTTCA TCTGAAG TAAAGGATACTATAGAGAGGGC CGGATTTCAAATGTT 100 76
        brxA 2144830 .. 2144846 -  -9.4  -5.26119   CTCCCAAAAAGAAAA              TGCCCG GAGAA CGGGCA              TTTAGCAGTGCGCAT 100 27
GII90_RS10750 2144019 .. 2144040 - -14.5  -4.24075   ACCGATTAACAGAAA           GCCCGTGAT ATGA ATCACGGGC            TTGTTTGAATGACGC 100 18
GII90_RS10745 NONE
GII90_RS10740 2142578 .. 2142599 - -10.3  -5.64304   TAACACAATAAAAAA           TCATTTCTG AACC CAGAAATGA            TTTTTTTATAGTCAG 100 37
GII90_RS10735 NONE
GII90_RS10730 NONE
GII90_RS10725 2140584 .. 2140604 - -12.6  -4.73094   AACAGTAACAGAAAA            GCGCAGTC TTCAC GACTGCGC            TTTTTTATGCACGTA 100 30
        ilvA 2137352 .. 2137368 -  -2.1  -2.71268   TTCTATTATATATGA              TGCCAGC CGG GCTGTCT              GTCATTTTGCGCGGT  40 53
GII90_RS10705 2137000 .. 2137045 -  -6.9  -5.86965   ACTGAGCAAAAAAAA TCCTGCATGCCTCCCCATTA ACGATTA CAAAGGAG-GGCATGCAGGT AAAAAACGGCATGTT 100 39
        scuA NONE
GII90_RS10695 NONE
GII90_RS10690 NONE
GII90_RS10685 2134680 .. 2134699 -  -2.1  -5.23316   GACCACACGAAAAAA            GAGACGT TGTTTC ATGTCTC             TTTTTTCATGACTTA  69 31
GII90_RS10680 2133253 .. 2133278 - -10.5   -5.4477   AAACGGTGAAAAAAA         GCACATACCGA TATA TAGGTATGTGC          TTTTCGCAGTGCTTC 100 43
        msrA NONE
        msrB 2131684 .. 2131712 -  -9.6  -4.98758   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTAACAGTTTAT 100 37
GII90_RS10655 2129112 .. 2129128 -    -8  -5.38047   TATTCATAGAAAAAA              GCAGCT GCACA AGCTGC              TTTCTATTCTAGCCG  95 34
        cgeC 2127162 .. 2127184 -  -6.9  -5.19879   CGTCAAACATAAAAA           CGGCTCCGC AGCAA GCAGAGCCT           CTGTCATCATTTAAA  90 36
        cgeD NONE
        cgeE NONE
GII90_RS10625 NONE
GII90_RS10620 NONE
GII90_RS10615 NONE
GII90_RS10610 NONE
GII90_RS10605 NONE
GII90_RS10600 NONE
        ablB 2119887 .. 2119903 -  -2.3  -2.62184   TTTCGGTTTATACCA              TTTGTTT TTC AAACGAA              CTCCTCCTCGCGCAT  40 49
        ablA NONE
GII90_RS10585 2118204 .. 2118220 -    -3  -3.48144   AAGAATACTGAAACA              TGACTC AGGAG AAGTCA              AAATAGTTGCGTTTC  48 13
GII90_RS10580 2117868 .. 2117885 - -11.3  -5.72616   ATGGACATAAAAAAA             TCCGCAG TGAT CTGCGGA              TGAAACAGCTATTAT 100 37
GII90_RS10575 NONE
GII90_RS10565 2116598 .. 2116626 - -16.2  -3.84873   ATAGAACATGAATAA        TAAAACCGGAGC TGACC GCTCCGGTTTTA        AGCCTCACTCATCTT 100 30
        pgpB NONE
        yodL 2115540 .. 2115555 - -10.4  -4.46581   TAAAACTGCAGAAAA              CTGCGG GTTT CCGCAG               TTTTCTTTTCATTAT  95 37
        deoD 2114463 .. 2114488 - -11.9  -4.09117   CGCATGCATAAAGAA         GAGGC-TGCCGG CAC CCAGCACGCCTC         TTGATATATTTTATT  93 36
        ldcB 2113562 .. 2113586 - -11.5  -3.52717   ACCAGACACAATGAA          GCCCGCTTA TCTAGTG TAAGCGGGC          TTTTCATTTTAAATT  87 34
GII90_RS10525 2110902 .. 2110924 - -17.8  -5.60993   GGGCGCATAAAAAAA           CCATACGCGG CAG CCGCGTATGG           TTTTTTTTACATTTC 100 32
GII90_RS10510 NONE
GII90_RS10505 2107463 .. 2107487 - -15.1  -4.84274   TAAGGATATGAAAAA          CCTTAGTCCGA AAT CCGGACTAAGG          TTTTTTTATACAATC 100 31
        yodB 2105992 .. 2106022 - -13.4  -5.93809   TCCCCACAAAAAAAA       GAAGAGAGAGCTCC AAA GAAGCTCTCTCTTT       TTTCATAAATGCGGA 100 377
GII90_RS10485 NONE
GII90_RS10480 2103528 .. 2103550 - -14.9  -5.26316   TCATCCGATAAAAAA           CGGCCTGCA ATCGA TGCAGGCCG           TTTTTTATTAATAGA 100 33
        rarD 2102051 .. 2102073 -  -3.4  -3.93061   AGCTGAAAAGCCAAA           GGCCTCAA TGGCTTT TTGACGCC           CGTTTCCACTTCACT  55 7
GII90_RS10465 NONE
GII90_RS10460 NONE
       bshB2 2100638 .. 2100662 -   -13  -5.46698   CTTAAAATTAAAAAA          GGTATAAGGC TTAAG GCCTTATACC          TTTTTGATTAATCAT 100 33
GII90_RS10440 2097441 .. 2097462 -  -8.1   -5.0916   TCTTCAAGACAAAAA           GCATTCAGCT TGA AGC-GAATGC           TTTAATAAAGATGCG 100 96
GII90_RS10435 2096048 .. 2096072 -   -13  -4.71482   ATGAAATGGCAAAAA          GCCTGTTCTT TCGAT AAGAACAGGC          TTTTACACTATGCAT 100 33
GII90_RS10430 2094423 .. 2094435 -  -4.8  -5.72622   GGTATAAACAAAAAA                GCCT ATAAA AGGC                TTTTTGTCATACTCA  88 44
GII90_RS10425 NONE
GII90_RS10420 2092802 .. 2092812 -  -5.4  -3.64703   GCCCCCTCATTCAAA                 CAGA GTT TCTG                 CAATATTTCGGACAG  60 6
GII90_RS10415 2090851 .. 2090876 -  -7.7   -4.7339   AACAAACGCCAAAAA         GCATAGGAT TAAGGGCT ATCCTATGC          TTTTATGAAGCAGTT  88 15
        sucA NONE
        odhB 2086499 .. 2086526 - -14.3  -4.76644   AATATGCATCAAAAA        GGGTACATCAC TTTATC GTGATGTACCC         TTTTTTATTATCCTT 100 33
GII90_RS10395 2083936 .. 2083954 -  -8.8  -5.52384   GCTCTATTAAAAAAA             GCCCCC TTTCCTC GGGGGC             TTCGTGTGTTAAAAA 100 34
GII90_RS10375 2079107 .. 2079123 - -13.7  -5.71983   TTAACCACAAAAAAA              CCGCAGC TGA GCTGCGG              TTTTATGTATCGACT 100 78
GII90_RS10370 2078393 .. 2078416 - -12.5  -3.61517   AGTGTGGTGTAATAA          GAACAGGGC GCACAT GCCCTGTTC           TTGTTTTTATATATA  95 84
GII90_RS10355 NONE
GII90_RS10345 NONE
GII90_RS10340 2076117 .. 2076145 -  -8.9  -5.75342   TTTTTTCAAAAAAAA        GCAAGTACATCTA ATA TCGGTGTACTTGC        TTGGCATTTTTACTT 100 35
GII90_RS10335 2075282 .. 2075303 -  -2.3  -6.17268   TTACAATAAAAAAAA           TAGCCTTTA TTGC TAAAAGCGA            ATGATTATTTTCTTC  95 100
        ssrS 2074934 .. 2074956 - -12.1  -5.58522   TAGATAAAATAAAAA           GCCATTTCC GAAAA GGAAATGGC           TTTCGCTACGTCTTG 100 24
        recQ NONE
GII90_RS10320 2071884 .. 2071906 -  -9.2  -5.89921   AGCAGAACAAAAAAA           GACACAAGCC AAA AGCTTATGTC           TTTTATCACAATCTA 100 46
GII90_RS10290 2065739 .. 2065762 - -14.6  -3.66139   TAGACACACTTCAAA          GGCCGGAGGCT ATT AGCC-CCGGCC          TGTTAGGTTTACGCC 100 34
GII90_RS10285 2065079 .. 2065095 - -10.9  -5.50499   TTACACGTAAAAAAA              GCCATAC TGA GTATGGC              TTTTAATAATACGGT 100 28
        czrA 2063770 .. 2063809 -  -4.4  -5.50774   TACAATAAAGAAAAA  GACATCCTTGCCC-GCT AACAGCG AGTTAAGCAAGGATGTC  TTTTTCAATCATGCT  84 30
GII90_RS10265 2062076 .. 2062103 - -12.9  -4.16904   AAGATTATAGACAAA        GAAACCTGACA GCAGTG TGTCAGGTTTC         ATATATTTTTTGCAT  95 17
GII90_RS10260 2061506 .. 2061543 - -14.5  -5.06414   TCCTCCTAACAAAAA   CTAATGGTGTTAGTT TTATTATT AACTAACACCATTAG    TTTTTCAAGAGTTTA 100 41
GII90_RS10255 NONE
GII90_RS10250 NONE
GII90_RS10245 NONE
GII90_RS10240 2058620 .. 2058634 -  -2.9  -2.63455   GGAGATATACAATAT               TCTTT TAACT AAAGA               GCCATCATTTTTTAT  41 30
        csaA 2058209 .. 2058231 - -16.4  -3.76373   GCCTCAATACGCAAA           GACGTTTGCC TTA GGCAAACGTC           TTTTTTTGCGTTATC 100 36
GII90_RS10220 2052653 .. 2052671 -  -9.6   -5.2015   TGAATAACAGAAAAA             GACAGCCA AAA TGACTGTC             TTATACATCACACAC 100 40
        yobL NONE
        yobK 2050225 .. 2050257 - -15.9  -3.19936   AATTATTTAATCCAA      TAAAATAAGCTCTCA TTG CGAGAGCTTATTTTA      TTTAGATTGAGGATG 100 82
GII90_RS10205 2048760 .. 2048780 - -10.5  -5.48063   ATTGAATACAAAAAA            GAACCTGCA TTT TGCAAGTTC            CTTTCACGTTGTCAA 100 517
GII90_RS10195 2048038 .. 2048063 -  -4.2  -2.94137   AACCACTGCACAAAT         TTTTTTTTGA TTTCCC CCAAAAAAAA          CAAATCCTTTCTAAA  50 252
GII90_RS10190 2044319 .. 2044331 -  -3.5  -4.90013   GAAGCCAAGGAAAAA                TATAA GAT TTATA                TATTCAAGGATGATA  72 146
GII90_RS10180 2043266 .. 2043286 -  -6.9  -3.15249   CACATTTTTCAGGAA            CAAATCTGT AAA ACAGCTTTG            TAATCTCAGTTGAAA  63 307
GII90_RS10150 2039067 .. 2039086 -    -5  -2.91593   GATCTTTTTACAAAT            TGGACTTT TGAT AAAGTCCT             GGATTATACACTAGC  50 204
GII90_RS10140 2038667 .. 2038678 -  -2.2  -2.54059   TATATACACTAACAT                CACC TCCG GGTA                 GATAAGTTAACCTTA  40 66
GII90_RS10135 2037515 .. 2037553 -  -9.8  -2.87683   ATATCGCTTTATATA  CCACCTCCT-CTTAG CTAATATGTT CTAAGTAGGAGGTGG   TATTTTGTTTGTATC  75 215
GII90_RS10120 2035649 .. 2035662 -  -8.1  -5.39221   ACAACAATTAAAAAA               GCCCT CATA AGGGC                TTTTGCATAAAACAA 100 41
GII90_RS10110 2034405 .. 2034429 - -11.7  -4.51363   GAGCAAATATTAAAA          GTATTTGTAAT TCA ATTACAAATAC          CTAGAAACACATTAT  95 492
        xynA 2033105 .. 2033129 -  -9.4   -5.0916   TGTGCAATATAAAAA         GAACCTGG-GA AATT TCACCAGGTTC          TTTTCTTAATTTCCA 100 523
        ppsA 2029990 .. 2030005 -    -9  -4.02132   GTTTAAACTTATAAA              GGAGCT TTTT AGCTCC               TTTTTCTCTTGTTTT  81 377
GII90_RS10090 2029383 .. 2029393 -  -3.2  -3.80831   TTAAAATAAACAACA                 GGAT ATC ACCC                 AACCCATCTACTTCT  52 33
GII90_RS10085 2028929 .. 2028940 -  -4.4  -3.71686   TTCAATGCAATAGAA                CAAC ATTT GTTG                 TCTCAGAGGTTATCT  57 63
GII90_RS10070 2026656 .. 2026677 -  -6.6   -5.4492   GACACATATAAAAAA           TGCTCCTA TAAGTT CAGGAGCA            CTACAAAAAACTGCT  93 51
GII90_RS10065 2025940 .. 2025965 - -10.6   -5.4148   TAAACAATGAAAAAA         GCTAATGTCT GCATGT AGACATTAGC          TTGGCTGGCGTTTAG 100 68
GII90_RS10055 2023719 .. 2023735 -  -2.2  -3.05011   ATATCCAAACCAAAT              CGATAC ATGGA GTCTCG              TACACCTTGGAAAGG  42 274
GII90_RS10035 NONE
GII90_RS10030 2020251 .. 2020261 -  -5.4  -2.94199   TAGTCATTAATCACA                 GTCA CTT TGAC                 ATTTGACTCAGCTAT  53 122
GII90_RS10025 2019743 .. 2019759 -  -2.3  -4.03413   ATTTGCGGATACAAA              GGATT AATTCAA AATCC              TTTGTATAAAGGCGA  55 282
GII90_RS10015 NONE
GII90_RS10010 NONE
GII90_RS10005 2017894 .. 2017913 -  -8.6  -5.63517   TCCGCAAATAAAAAA            GTGACCAC CAAT GTGATCAC             AAATACATCAAATAA 100 42
        oxdD 2016526 .. 2016548 -  -7.1  -4.98857   ATTCAAGCAGAAAAA           CCCTACATA ACGTA TATATAGGG           ATTTAATAAAACACA  85 106
GII90_RS09995 2015594 .. 2015609 -  -2.5  -4.32034   CCATGATCATGAAAA              GGAGT GGCTTA ACCCC               AAAAATACAAGCCCT  60 507
GII90_RS09980 2012887 .. 2012901 -  -7.1  -4.17109   AATAACGAAATGAAA               CAGGC TGTTG GCCTG               ATAACAGCTATACAG  73 47
        exlX 2011924 .. 2011943 -  -6.4  -5.17054   AGAACATTGAAAAAA            CAGCGG GAAAAGAT CCGCTG             TTTCGTATTTTTTAT  86 37
GII90_RS09965 2008408 .. 2008443 -    -7  -4.39889   ACAACCACAGTAAAA   GTAGCCAACCCCCACC GAATAA GATGGGGGTTG-C-AC    GTAAGTAGCCTGTTT  79 39
GII90_RS09950 NONE
GII90_RS09945 2006837 .. 2006875 -  -8.8  -4.87892   GGTGAATAAAACAAA   TCTGAGGAGAGCGAGA TTCATTG TCACGCTCTCCTCTGT   TTAGCTGTATGGATC 100 353
GII90_RS09930 NONE
GII90_RS09925 2001576 .. 2001586 -  -3.2  -2.78508   GATTCCTCAAAACAG                 CAGA AAT TCCG                 TCTTAAATTAATACT  44 28
GII90_RS09920 2000224 .. 2000243 -  -8.5  -5.36364   TTAAAAAGATAAAAA            GCGCCCC TCAAAC AGGGCGC             TTTCTAATTAAGATG 100 33
GII90_RS09900 1997557 .. 1997572 -    -9  -5.96894   ATTCAAATAAAAAAA              CCTGTC GAAA GACAGG               TTTTCATTTTTAAGG 100 35
         rtp 1996876 .. 1996903 -  -6.9  -4.68539   ATGAAAAGCAGAAAA        CACCCGGTTCA CACTGC TGCGCCGGGTG         TTTGTTTCTATTAAA  81 36
GII90_RS09890 NONE
        proB 1994716 .. 1994750 -  -6.5  -6.13503   TATCAATAAAAAAAA    TGAACCCGA-GCTTCT ATAT AGAAGCTTCGGGTTTT     TTTCTGCAAATTAAT 100 36
        gltB NONE
        gltD 1987549 .. 1987576 -   -15  -5.83226   AATGGAATAAAAAAA        GAAACCGG-CTGG CAG CCAGACCGGTTTC        TCTTATATGATAATC 100 49
        yofA 1985477 .. 1985501 -  -7.9  -5.85425   TAAATAAATAAAAAA          CTGTACTCGCT TCA AATGAGTACAG          TTTTTTCATGCAGAT 100 93
GII90_RS09850 1983269 .. 1983289 - -11.3  -5.82281   AAATATACAAAAAAA            GACACAATT TCA AATTGTGTC            CTAATCCTCATCCTT 100 26
GII90_RS09845 NONE
GII90_RS09840 1982262 .. 1982288 - -12.4  -4.55295   GTTTGCATAAAGAAA         GACAACAGGC GAAAAGT GCCTGTTGTC         TTTTTGTGAATATAA 100 39
GII90_RS09830 1979953 .. 1979976 - -11.1  -5.99154   TATCAAATAAAAAAA          CACCGTTCA AACTTA TGAACGGTG           TGATTCGGAGGCTAT 100 37
GII90_RS09825 NONE
        dacB 1977335 .. 1977357 - -10.7  -5.77988   ACAGACATAAAAAAA           CCTGTTTTC TCTTG GAAAACAGG           TCTCCCGCTATTATT 100 36
        ppsA 1969305 .. 1969320 -  -3.3  -3.92659   TTTTCAAAAGTTAAA              GATCT TTCACG AGATC               TTCGATGCTAGATAA  55 5
        ppsB NONE
        ppsC NONE
        ppsD 1943083 .. 1943095 -  -3.4  -4.21462   ATTCATTAGTGAAAA                CTGA GCATA TCAG                CGATCTCTTGCAGGG  59 3
        ppsE 1939190 .. 1939216 -  -9.5  -5.01422   TGATACAAAAAGAAA        GACGGACAGAGA ATGG CCTCTGTCCG-C         TAATCCGCTTTATCG 100 35
GII90_RS09790 1938697 .. 1938729 -  -5.8  -5.48163   AAATAAACGAAAAAA     GTCCT-AAAGCATGTT GTG AAC-CGCTTTTAGGAC     TTTTTATCATTCATC  91 19
GII90_RS09785 1937025 .. 1937043 -  -9.6  -5.41143   CACTTTTTAAAAAAA             GACGACTT AGA AAGCCGTC             CTTCTCATTTCTTAT 100 37
GII90_RS09780 NONE
GII90_RS09775 NONE
GII90_RS09770 NONE
GII90_RS09765 NONE
GII90_RS09760 NONE
GII90_RS09755 NONE
GII90_RS09750 NONE
GII90_RS09745 NONE
GII90_RS09740 1928676 .. 1928696 -  -9.7  -4.27886   TTGTAAATATATAAA            GGAGCGC TTTTTTT GCGCTCC            TAAGTTCTTGCTTTT  86 39
        nrnB 1926969 .. 1926980 -    -3  -2.56601   TTGATTAAAAAGCAT                CATA TCGA TATG                 TCGGAAAACTGGTTT  40 386
        xynD NONE
        xynC 1921678 .. 1921701 - -11.8  -5.92399   CAACAAAATAAAAAA          GCGATTTCCC AATC GGAAAATCGC           CAATTCAGACACTCT 100 66
GII90_RS09690 1916904 .. 1916926 - -16.4  -5.70522   AACAATAATAAAAAA           CCCGCTCATA CTA TATGAGCGGG           TTTCGTTTGTTTTTT 100 193
        plsY 1910865 .. 1910880 -  -3.3  -3.26722   GTCATATTCATAACA              GAACA CCCCTT TGTTC               TTCATTTGAATTTTC  47 93
GII90_RS09665 1910548 .. 1910568 - -11.2  -5.42259   TCATTTGTAAAAAAA            GAACGCAC ATGAA GTGCGTTC            TTTTTTATTGGTATT 100 30
        sspO 1905314 .. 1905326 -  -4.1   -2.8272   TCATAAAATGAGAAC                CTCCT TAA AAGAG                TTCGGTGTTATTGAT  46 33
GII90_RS09620 1905134 .. 1905149 -  -4.7  -5.66684   GAACGCATAAAAAAA              CAGAC ACTAAG GTCTG               CTTTTCTTACATATC  88 32
        cotM 1904644 .. 1904673 -  -9.5  -5.47821   ATGGACGGAAAAAAA       GTCACTTTCAT AATAGGGG ATGAAAGTGAC        TTTTTATGTTTAGCT 100 35
GII90_RS09610 1903995 .. 1904016 -  -8.8  -5.33921   AAATGAATTAAAAAA           CCTTTCCT CTTGTC AGGAAAGG            TTTTTTATTTGAGAA 100 30
        ynzD 1901835 .. 1901860 -  -9.2  -4.39828   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCATTCA  91 34
        lexA 1896612 .. 1896637 - -12.6  -4.44667   TTTTTGAACAACAAA         CCCCCTCTCC GTAAAG GAAGAGGGGG          TTATTTTATGCATCT 100 55
GII90_RS09545 1895012 .. 1895036 -  -9.3  -4.67755   ATAGCTACTGAAAAA          TAGGAGGCGAT AAG ACAGCCTCCTA          TTCCTTATGCTTCTC  91 23
GII90_RS09495 1885273 .. 1885302 - -11.7  -5.40474   ACCCTTGGAAAAAAA       CAAAAAAGAGAGA TACC TCTCTCTTTTTTA        TTCTTCGACAGCCTT 100 23
       tatAC 1884365 .. 1884385 -    -9  -4.84353   ACAAATCAAAATAAA            GAGCCGAT TTTTC ATCGGCCC            AAACGATTTATCCTA 100 38
        cotC 1883975 .. 1883990 - -11.8  -4.49311   CACAAACAAAAAAGA              CCCGGC AATA GCCGGG               GGAAAGTAAAAACGA  95 58
GII90_RS09470 1883413 .. 1883428 -  -3.3  -3.86202   CTTTATCAGAGGAAA              GAATG AGATCA CATTC               GTTTTAACCGATTTG  55 18
GII90_RS09465 1882503 .. 1882522 - -10.7  -4.41047   ATGCTCCAAGGAAAA            CCGCCAG ACAATG CTGGCGG             CTTTTTGCTGCTTCG  95 42
GII90_RS09460 1882195 .. 1882214 -    -8  -5.48787   ATAATACATAAAAAA            GATTAACT CTAC AGTTAATC             TTTTTTATTCAGAAG 100 20
        cotU 1879925 .. 1879944 -  -3.6  -4.00042   TTGTCGATGAAACAA            GCATCTCT ATAA AGAAATAC             TTTTATCTAAATTTT  56 226
         alr 1876922 .. 1876948 - -16.8    -5.252   TAGTTTCAGAAAAAA         CAAAATCCCTCT GGT AGAGGGATTTTG         ATTCAGCATTTTAAG 100 46
        yncB 1874225 .. 1874246 -  -8.7  -4.21954   TTAACACACAAATAA           CCCCTCACA TTGA CGTGAAGGG            GTGTTTTTTATTGTT  83 185
GII90_RS09400 1869503 .. 1869520 -  -8.5  -5.88565   CCTAGAATAAAAAAA             CTCATCT TTAA AGATGAG              CTGTCCATTCCATAA 100 45
        cwlC 1851782 .. 1851808 -  -7.9   -5.7946   TCTTGAATAAAAAAA         CCCGGTTTCTC GCGAT GAGGAGCCGGG         TTTTTTTATGAGACG 100 57
GII90_RS09250 1844513 .. 1844531 - -13.2  -4.72846   TCACACACTTAAAAA             GACCCCTT TTT AAGGGGTC             TTTTGCGTTTAATAA 100 34
        ebrA NONE
        ebrB 1843712 .. 1843736 -  -7.1  -5.14682   GGAGAATAAAGAAAA          CAGACGGTC ACTCACA GGCCGTCTG          TTTTTTATCTTCAGC  90 8
        aprX 1840369 .. 1840398 - -10.1  -5.38497   ATTCAAACGAAAAAA       CCGGCAGTTCTGCT GAG AG-AGAATTGCCGG       CTTTTGATGATGTTT 100 39
GII90_RS09220 NONE
GII90_RS09215 1838981 .. 1839014 - -18.3  -4.03413   ACGGCTCGATATAAA     GCAGCGCCTTTGAAC GAAA GCTCAAAGGCGCTAC      GCTGTATTATTTTGA 100 53
GII90_RS09210 1837561 .. 1837584 - -14.6  -4.51238   CTGAGAAAACACAAA          CGCCCCCTCT TTTA AAAGGGGGCG           TTTTGAATGTTATTT 100 35
GII90_RS09125 1760220 .. 1760243 - -12.4  -5.52347   AACAAAACCAAAAAA          GGCCCTTTCC ACTG GGGAAGGGCC           TTTTTCATCATGTTA 100 38
GII90_RS09120 1759132 .. 1759157 -  -6.2  -4.12225   AACGACGAAATCAAA         GCGCTTCTGGA CGACC TCC-GAAGCAC         ATCAGACCCATTTAC  68 514
GII90_RS08575 1650163 .. 1650182 - -13.6  -5.15167   GACGATTAAGAAAAA            GGCCCCAA CATC TTGGGGCC             TTTTTCTTTTTTATC 100 36
GII90_RS08505 1634592 .. 1634616 - -13.5  -5.00895   TTCACCACATAAAAA          CGCCTGCCACA TAT CGGGGCAGGCG          TTCATTTTGTTATAC 100 35
GII90_RS08415 1615116 .. 1615145 - -13.7   -4.7458   ATGAGAAGAAAGAAA       TAAGCCAGAGCAT ACAA ATGCTCTGGCTTT        TCTTTATGCGGCTCA 100 38
GII90_RS08145 1555333 .. 1555351 -  -3.1   -4.4009   TCGTATGTGAGAAAA             CAATACC AGTCA GGTATAG             AGCTTGCAAAAAAGC  62 468
GII90_RS08125 NONE
GII90_RS08120 1552810 .. 1552828 - -13.2  -4.35926   AGCTGAAAGCGAAAA             GCACCTGA TTC TCAGGTGC             TTTTTCTATACATTT 100 31
       spoVV 1549585 .. 1549606 -  -5.9  -3.61591   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  61 20
GII90_RS08060 1544345 .. 1544367 -  -9.2  -4.52047   GACGATATCATAAAA           GGTACAGC GAAATAT GCTGTACC           TTTTCGTTACATTTG  91 32
        ctaA 1537027 .. 1537052 - -13.4  -5.48787   ACAAGACATAAAAAA         GACCAAAGCC GCCTAA GGCTTTGGTC          TTGAGTCCTTATGAT 100 34
GII90_RS08000 1529776 .. 1529796 -  -2.5  -4.11484   GTGAAGCTGTTAAAA            GGTGAGA GATCAGG TCTCGCC            CAGCTTGCAGCTGAT  55 53
GII90_RS07990 1527687 .. 1527707 -  -5.4   -5.4593   CCAAAATAAGAAAAA            GCTAAAGC GCAAG GCTATAGC            TTAGTCATTGTTGTT  88 26
GII90_RS07985 1527356 .. 1527390 - -17.4  -3.06073   GACAGTCTGCAAAAT     CATAAAAGACTCAGCT GAA AGCTGAGTCTTTTTTG     TGTTCTGTATGGTTA 100 51
GII90_RS07970 1524792 .. 1524810 -  -7.4  -5.13137   TAAAGAAATGAAAAA             CACCGC TTTCTTT GCGGTG             TTTTTTGATTACAAT  90 62
GII90_RS07965 1523929 .. 1523953 - -12.2  -5.71712   GCTGATATAAAAAAA         GCGCTTGTCCG ATTC CGG-CAAGCGC          TTTTTTACATTAAGC 100 35
        nprE 1519034 .. 1519051 - -11.3  -4.91084   TATGTAACAATAAAA             GCCTGAG GGAT CTCAGGC              TTTTCCTAATATTAC 100 37
GII90_RS07935 1517759 .. 1517779 - -14.1  -5.06414   CGGGTTCAATAAAAA            GCCTCTCAA ACA TTGAGAGGC            TTCTGATGATTTGAA 100 43
GII90_RS07915 1515236 .. 1515257 -   -13  -5.12971   AAGATGTAAGAAAAA           GAGCCGGG GGATAT CCCGGCTC            TTTTTTATGCTTGTG 100 30
        speA 1513273 .. 1513295 - -17.8  -5.94597   GAAGAGTAAAAAAAA           GCATGCGGCT TAA AGCCGCATGC           TTTTTATTTTTTATT 100 36
GII90_RS07895 1512325 .. 1512348 - -13.2   -4.8048   TTTTCATATCAAAAA          CAGCCC-CGCT TTG AGCGAGGGCTG          TTTTTTTATTTTGAC 100 31
GII90_RS07865 1505846 .. 1505869 - -12.5  -3.61468   GTGCAACGAAACGAA          TGACCAGCC GTATAT GGCTGGTCA           ATTTCATGCTGTGTG  95 42
GII90_RS07860 1505192 .. 1505212 - -16.9   -4.8743   TTTAAAATAAAGAAA            CGGCTGGCA TTG TGCCAGCCG            TTTTCTCTTTTAGCG 100 35
       rnpZA NONE
GII90_RS07845 1502115 .. 1502139 - -20.1  -5.08601   TCACTGCAATAAAAA          GAGGCACTCCC TTA GGGAGTGCCTC          TTTTTTTAAACCTCC 100 31
       mreBH 1495561 .. 1495573 -  -3.4  -4.67552   GTGAGGAAAAAAGAA                GCAA GAAAT TTGC                CGCGTGTGAGAATTT  64 53
GII90_RS07810 1495334 .. 1495354 - -11.9  -4.81249   GCCCAAAGTGAAAAA            CCCAAAACG ACA CGTCTTGGG            TTTTTTCAATATTAT 100 37
GII90_RS07805 1493988 .. 1494022 -  -9.6  -4.99861   TATGAAGCAGAAAAA    TAAA-AAAAGGAGGC GGAAAA GCCTCCTTTTATTTA     CTTAAAAAGCCCAAT 100 27
GII90_RS07790 1490909 .. 1490957 -   -20  -3.59627   ACGAAATGCGTCAAA CAAAATAAAAACGCCTTGCTGGC CTAG GACAGCA-GGCGTTTTTATTTTG AAAAAGAAGCGACCA 100 18
GII90_RS07705 1473403 .. 1473424 -  -9.5  -5.48623   AAATATAAAGAAAAA           CTGCTTG-GC ATC GCTCAAGCAG           TTTTTTTATTGAGGT 100 31
        mscT 1470212 .. 1470246 - -15.3  -3.23979   AGCAGAATTCAGTAA     TAAAAAAACCGAAGC AAAAA GCTTCGGTTCTTTTA     TTTATTCTGTTTCTT 100 27
GII90_RS07595 NONE
GII90_RS07590 NONE
GII90_RS07585 1454136 .. 1454163 - -12.2  -4.75174   TATTGAATGTAAAAA        TGCGCTTTTTTC TAAG AAAAAAAGCGCA         TTTTTAACCTGCATT 100 39
GII90_RS07580 1453541 .. 1453588 - -13.8  -3.06915   ACGTATGTTATTGAA TAAATAAAAACAGCCGTTGCC AGAAAGA GGC-ACGGCTGTTTTTATTTT AAAAGTAACTCTCGC 100 24
GII90_RS07570 1452198 .. 1452225 -  -3.5  -5.60993   CTTTTCAGAAAAAAA        GAAGACAACCA GCGATT TGATTGTCTTT         ATTGTATCATGTTCT  84 67
GII90_RS07565 1450877 .. 1450896 -  -9.3  -5.86609   CCAAAAAAATAAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT 100 13
GII90_RS07550 1445632 .. 1445656 -   -13  -5.95539   GGTGAAATAAAAAAA          GATTGCCTGT ACGAA ACAGGCAATC          TTTTTTTATTATTTT 100 34
GII90_RS07535 1441827 .. 1441850 -   -11  -3.66646   AATATTTCACTTAAA          CGGGCTGTTG TGAT CAACAGCTCG           CTTTTTTATAAAAAA  88 15
GII90_RS07490 1432314 .. 1432337 - -16.8  -5.08255   ACTCCTAAAATAAAA          CCAGCAGCCT AATC AGGCTGCTGG           CTTTTTATGTATCAA 100 37
GII90_RS07460 1426591 .. 1426606 - -10.4  -5.08824   TTTTTATGTAAAAAA              GCTGCC GGCC GGCAGC               TTTTGAGAAAGCGAA 100 108
GII90_RS07430 1421115 .. 1421137 -  -3.5  -5.64421   ATCCGAAAGAAAAAA           TGCCTAT CTAGAGATC ATAGGCA           TTAAATATTATTATC  84 262
GII90_RS07400 1414626 .. 1414648 - -14.2  -6.04378   AAAGTATAAAAAAAA           GCGGCTTCCT AAA AGGAAACCGC           TGATTGTTATTTTGC 100 32
        motA NONE
        motB 1412669 .. 1412695 -    -8  -5.71638   TAATAAGTAAAAAAA         GGAAGCCTGATA TGT CACAAGGCTTCC         TTTTTTGCTATTTTT 100 33
        kinD 1410490 .. 1410512 - -13.4  -5.49569   CACGAAGATAAAAAA           CCCTCCTGAC ATG GTCAGGGGGG           CTATGATGCGGATAC 100 26
GII90_RS07365 1409158 .. 1409178 - -16.9  -2.90486   AATAAGCGTGAGATA            GCCCCGTTC ATC GAACGGGGC            TTTTTATATTTATTG 100 35
GII90_RS07335 1403511 .. 1403535 - -18.7  -5.00616   TGTGGCCGTAAAAAA          GCCTCCTTCTC AGA GAGAAGGAGGC          TTAACATCTATGTCC 100 285
GII90_RS07330 NONE
        mtnA 1401160 .. 1401195 - -10.5  -6.11392   AAAGAAACAAAAAAA    CCGCT-GACTCGGCTC CAAAT GAGCAAAGTCCAGCGG    TTTTTTAATGCACCT 100 30
GII90_RS07305 1396928 .. 1396959 - -11.6  -5.70522   AACAACAATAAAAAA      GACCTCTTAGGCGG CGTC CCGCTTAAGAGGTG       CTTTTTCTATTTTAA 100 32
        htpK 1393124 .. 1393143 - -12.8  -5.35224   TGGAGAAAAATAAAA            CCCCGGCC TCTG AGCCGGGG             TGGCGCAGACTATAG 100 35
GII90_RS07275 1392793 .. 1392814 - -12.3  -3.49107   AGCTAAAAATGAAGA           TTCGCCGAG TGCC CCCGGCGAA            TAAAGACCTGAATTT  90 39
GII90_RS07250 1386347 .. 1386369 -  -7.6  -5.41143   TATGGGTGAAAAAAA           GCCGGCGC TGTTATT GCGACGGC           TGTTCAATAATGAAT  95 13
GII90_RS07245 NONE
GII90_RS07240 1383530 .. 1383552 - -12.1  -3.81539   AGTTAAACACGGAAA           GAGCTGACT TCATT AGTCAGCTC           TTTTTCTTCAACTGA  93 19
GII90_RS07225 1379762 .. 1379777 -  -3.2  -5.86965   ACCTATCAAAAAAAA              GACTGA TGCC TCGGTC               AGCACAGTCTTTTTT  88 43
GII90_RS07215 1377505 .. 1377527 -    -2  -4.83169   ATTTTTTTATAAAAA           TCCTATATAC GAG GTAGATATGA           TGAGATTATCGTTTA  66 501
        tnrA 1376406 .. 1376429 -  -8.8  -4.84529   TTATAAACGTAAAAA          GTCCGTCTCA ACTG CGAGCCGGAC           TTTTATTATTTAACG 100 35
        thiU NONE
GII90_RS07155 NONE
GII90_RS07150 NONE
        thiX 1367073 .. 1367093 - -14.1  -5.84381   TCATCAATAAAAAAA            TCCGCTATC TGT GATAGCGGA            TTTTTTATGATGCGA 100 30
         isp 1364716 .. 1364741 - -14.1  -5.18726   TTCTCACAACAAAAA         GCCTCTTTCCC ATGA GAGAAAGAGGC          TTTTCTACGTAAAAC 100 336
        metE 1362317 .. 1362337 - -11.2  -5.74122   TATTATAGAAAAAAA            CCATCTGC CAAAT GCAGATGG            TTTTTTCAAATTATA 100 36
        guaD 1361678 .. 1361702 -  -9.3  -4.15703   TTGGAGAAATAACAA          GGACCAGGC CGCGCAT GCCTGATCC          TTTTAATATTCTTTC  85 28
        ohrR 1360439 .. 1360463 - -14.4  -5.47159   CTGAATAAATAAAAA          GAGGATGCCT GTACA AGGCATCCTC          AATTTTTTTGATGAA 100 24
GII90_RS07060 1353034 .. 1353055 -  -9.5  -3.92869   AACACATACATGAAA           CTCTTCTCC TTTC AGAGAAGAG            TTTTTTATTGAGATA  83 66
GII90_RS07045 1350013 .. 1350023 -    -4  -2.50387   CTTGATAAAATAAGC                 TGTT CAA AACA                 TGAAAAAGGGGAAGA  45 45
         pgl 1348869 .. 1348896 -  -9.2   -5.4659   TAAGATAAATAAAAA        GAGTGGCTCC TTTTTACT AGAGCCACTC         CATTTGTTTATACTT 100 33
        htrA 1336928 .. 1336955 - -15.6  -5.10461   TTTATCTAATAAAAA        GCCTCAGACCGC TTTT ACGGCCTGAGGC         ATTATGTCTTACGAA 100 34
        steT 1330375 .. 1330397 - -13.5  -5.14563   TGTTTCACCAAAAAA           CGGTTCCCT AAACA AGGGAACCG           TTTTATCAGCTTGCT 100 31
GII90_RS06955 NONE
GII90_RS06950 1328468 .. 1328488 -    -9  -5.52384   GTTCCATCAAAAAAA            CCGCTCCT TTGAC AGAAGCGG            TGTGACATTAAAATA 100 33
     spoIISA NONE
GII90_RS06940 1327434 .. 1327458 -  -7.9   -4.0219   TAAGAAAAGGAATAA          GGACAAGAG CTGTTTT CCCTTGTCC          TTTTAGTGTGATCAT  76 37
GII90_RS06935 1327227 .. 1327245 - -14.6  -5.00846   CAAAGACCATAAAAA             TCCCGGAG CCG CTCCGGGA             TTTATTTTTTCTTCT 100 27
GII90_RS06750 1300244 .. 1300256 -  -2.6   -5.0065   TAGCGAGAAAGAAAA                GCCC GTATA GGAC                TGGAAGGTAGTGTAG  68 126
GII90_RS06745 1299312 .. 1299329 -  -4.1  -3.86252   CTGGAGGAAAGAGAA             CGGGA TATTGTCG TCCCG              ACGACGTTTCCGCGT  57 294
GII90_RS06730 1297518 .. 1297553 - -17.8  -3.67068   AGGAAAAGCTGTAAA    TGAAAAGACGGAAGCT GTGA AGCTTCCGTCTTTTCG     CCTTACATACAAACT 100 28
GII90_RS06720 1296167 .. 1296180 -  -8.1  -5.64274   TGATGCATAAAAAAA               GACCC TTAG GGGTC                TTTTTTATTTCTTCA 100 30
GII90_RS06700 1292829 .. 1292848 -  -6.5  -5.77853   AAGGCGCAAAAAAAA            GATACCT CTTAAC AGGTATC             TTTTTTCTTGTTTAC  93 42
GII90_RS06695 1291846 .. 1291868 -  -9.2  -4.95547   GTTATAATAAGAAAA           GGCTATCC TTCAAGC GGATAGCC           TTCTTCATTAAATCA 100 33
GII90_RS06625 1275611 .. 1275636 -  -8.3  -4.59342   GGTAGCACAAATAAA         GGAGAACAGGC TTTC ACCCATTCTCC          TGCAGATGCTACGCA  88 34
GII90_RS06620 1274764 .. 1274777 -  -5.3  -4.24623   TTAAAGAGAGAGAAA               GGTAA TCCA TTACC                GAGTGCCTCCCTTCA  67 21
        fetB 1273988 .. 1274011 - -11.8  -5.03945   TAACAAGTACAAAAA          GCCGCTTTTCC CTC GGAAA-GCGGC          TTTTGTCTGTCATTC 100 35
GII90_RS06605 1272772 .. 1272792 - -12.7  -5.36364   GTAAAAACATAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATA 100 34
GII90_RS06590 1269674 .. 1269695 - -13.1  -5.15634   TATTTGACTAAAAAA           GAAAGAGCC TGTG GGCTCTTTC            TTTTTTATAATGTAA 100 30
GII90_RS06565 1263870 .. 1263885 - -10.4  -5.14563   TTGTCCACTAAAAAA              GCGGCT GAAT AGCCGC               GTAGGGTGTTTATTT 100 35
GII90_RS06560 1263393 .. 1263411 -  -3.7  -5.21709   TTCTACATGAAAAAA             GCGTCAC ATACA GCGGCGC             TTTTTGATTCCCAAA  74 10
GII90_RS06550 1262151 .. 1262181 -  -5.3  -4.44667   TTTGTGAACAATAAA       GGCGGCCGGGA GGATGGAGT TCTTGGCCGCC       TCTGGTATGAGGTTA  70 38
GII90_RS06545 1261561 .. 1261590 - -13.7  -3.20126   AAGCGAAATAAATTA       GAAAAGGCTGTCC GTAC GGACAGCCTTTTT        TCTATTTAATAAGAG 100 31
        cotT 1259614 .. 1259634 -  -4.7  -6.09196   TTTAAAACAAAAAAA           TGGGGAGC TGGACT GC-CCCCA            TTTTGATATGTGGCG  95 42
        cyoE 1258509 .. 1258530 -  -4.4  -5.63517   TTTCCAAACAAAAAA           GAGTCACA TTAATG TGTGGCTC            TTTTTGCATCATCTG  86 34
GII90_RS06525 NONE
GII90_RS06520 1257215 .. 1257235 -  -4.7  -4.87291   TAGGGGAACGAAAAA            GCTTAGTCA TAT CGATTAAGC            TTTTTCCGCATCCCT  74 20
GII90_RS06510 1255920 .. 1255947 -    -2  -2.98105   ATAACATATAACAAT        TTTCTCTGGTAC CTTG GCAGTAGAGAAA         GATGAAAAAATTGAG  42 165
GII90_RS06505 1255323 .. 1255349 - -15.3  -3.89435   GGTAAATAATCCAAA         CAAAAGCAGGC GCAGT GCCTGCTTTTG         TAATTAAGGACTCTA 100 38
GII90_RS06480 1248679 .. 1248711 -   -10  -4.28432   AACTTGAAGCGAAAA     TAAGGTCCCTTCTCT TTTT AGAGG-GGGACCTTA      TTTTATTCATGCATG  86 72
GII90_RS06430 1242639 .. 1242665 - -11.6  -5.04325   TTTAAATTACAAAAA         TCCCCTGAACCA CTC TAGATCAGGGGA         TTGCTTTCCCAACAG 100 87
GII90_RS06420 1240445 .. 1240462 -  -2.7  -3.51234   AGGGAAATGCAAATA             TCCTTTT TATA AGAAGGA              AGAAAACCAATTTCC  48 14
GII90_RS06415 1239808 .. 1239830 - -10.6  -5.00616   CGGTTCGTTAAAAAA           GAAGCCGG GGATAGT CCGGCTTC           TTTTATTATTGTTCG 100 31
GII90_RS06400 NONE
GII90_RS06395 NONE
GII90_RS06390 1235434 .. 1235455 - -13.1  -4.76041   TATATGCAGTAAAAA           TCCGGATCT CAAA AGATCCGGA            TGCGTTCAGTCCTTC 100 31
GII90_RS06380 1232715 .. 1232734 -   -15   -4.8048   TTTTTACAGTAAAAA            CCCGGCAG TAAT CTGCCGGG             CTGTTAATGATGCAA 100 29
        cotV NONE
        cotW NONE
        cotX 1229651 .. 1229671 -  -8.3   -5.4593   GGAAAATAAGAAAAA            GCAGAGC GTTTTTA GCTCTGC            TTTTAGGTCCTAGAG 100 35
        cotY NONE
        cotZ 1228429 .. 1228456 - -13.6  -2.98823   CTTTTTTTACATAGA        GAAAAGCCTGCA GGCC TGCAAGCTTTTC         CAGCTTATGATTAAT 100 36
        prpE 1218385 .. 1218407 -   -15  -4.51799   AGCAAACTGATAAAA           GGAGAGAATC ATT GATTCTCTCC           TTTTTTATATGGGGC 100 30
GII90_RS06255 NONE
        cwlQ 1214165 .. 1214187 -  -6.3  -5.41143   CACTTCGCAAAAAAA           CCAGAGG GAAAGAGCA CCTCTGG           TTACGCGTAATAAAC  89 26
GII90_RS06245 NONE
        spxH 1212612 .. 1212641 -  -7.1    -5.626   TATGGCATAAAAAAA       CAGCCTCAAGCAT ATGC ACGCCTGCGGCTA        TTTTTCACATGATTG 100 23
GII90_RS06235 1212129 .. 1212153 - -12.9  -3.93166   GTCTTAAAAAAGTAA          GCCTGTGCG GAAATGA CGCACAGGC          TTTTTTAAAACCCTT  95 30
GII90_RS06220 1208324 .. 1208345 -  -2.9   -4.3898   ATCATCGTCACAAAA           GCCCAGCTT TCCA AAGACGGAC            AAAAGCTCGAACTGC  60 424
GII90_RS06205 1207136 .. 1207157 - -13.1  -4.30844   ATCGTATCATCAAAA           GAAGGCTGA GTCA TCAGCCTTC            TTTTATTTTTCAACC 100 28
        trpS 1197110 .. 1197129 - -12.2  -5.53288   GTCAACTGAAAAAAA            CCGCTCTT TGCA AAGAGCGG             TTTTTTGATTAGCGT 100 34
        yjzB 1186819 .. 1186838 - -10.8  -4.14147   ACAGAATAAGAAGAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  89 29
GII90_RS06085 1183721 .. 1183743 - -10.7   -5.1861   GTGACCACTAAAAAA           CCCAAAACA ATAAA TGTTTTGGG           TTTTTGGCTTTTTAA 100 37
GII90_RS06015 NONE
GII90_RS06010 1169030 .. 1169056 - -15.2   -4.0098   TTTGAAGTCAAATAA         GAGGCTATGGCG AGT CGCCATAGCCTT         TTTTTATTGCAGTTT 100 29
GII90_RS05995 1166689 .. 1166712 -  -6.1  -5.34309   ATGAGCAAACAAAAA          CAGTCAGGAC ACAGA GTC-TGACTG          TTTTTGTTTGCTCAT  89 37
GII90_RS05970 NONE
GII90_RS05965 NONE
GII90_RS05960 1161428 .. 1161460 - -15.6  -4.37971   AAAATAGCATGAAAA     CGGCTCGC-CTGCAG CAGA CTGCGGAGCGAGCCG      TTTTTTTATGTCTAG 100 37
GII90_RS05945 1157748 .. 1157772 - -15.1  -4.57341   AATCTCGTTGAAAAA          GACTGCCCGAT TCG ATCAGGCAGTC          TTTTGGAAATTAATG 100 35
GII90_RS05940 NONE
GII90_RS05935 1156355 .. 1156377 -  -9.9  -5.24989   TCAGACAGCAAAAAA           CCGAACAGA AGATA CCTGTTCGG           GAAAAAAGAGGGTTA 100 38
GII90_RS05930 NONE
GII90_RS05925 1153877 .. 1153901 - -10.7   -4.8743   CTCAAAATAAAGAAA          TGGCCCAGCTT AAT AGGCTGAGCCA          TCCCACTTGTAGCGA 100 10
GII90_RS05920 1152709 .. 1152737 -  -3.1  -4.59342   CCGATGACAAATAAA        GAGAAAGCGGC TTACATT GCCGATTTTTC        TGATGAATTTCTTGT  66 449
GII90_RS05905 NONE
         sat NONE
        cysC 1148882 .. 1148897 -  -6.8  -5.56673   ACTCATAAGAAAAAA              CCCGAC ATTG ATCGGG               TTTTTTATATAATTC  93 30
GII90_RS05885 1147178 .. 1147201 -   -11  -3.75461   GAAACTGGCATTAAA          GCGGCA-GCTG AAA CAGCACGCCGC          CTGATGATGTCCTAG  88 48
GII90_RS05875 1145045 .. 1145055 -  -3.2  -4.19238   CCTTCAATTGCAAAA                 GAGT GAC ACCC                 CAAAATATCCTGCCG  59 3
GII90_RS05870 1144463 .. 1144484 - -11.6  -5.40072   CTTTCCGCAAAAAAA           GCAAGGGC ATTTTA GCCCTTGC            TTTCTCTTTTCTCAT 100 15
GII90_RS05850 1139776 .. 1139800 - -10.7   -5.1287   CTGATATCTAAAAAA          CACCCGGCC TTGATTG AGCCGGGTG          TTACGCCATACCTTT 100 26
GII90_RS05840 1138158 .. 1138194 -  -6.1  -4.11346   AGATTTAAATAAGAA   GGATAGAT-GAGCA GGGAAATATA TGCTCTATCTATCC    TTTTTTGTACAACAG  67 67
GII90_RS05830 1135506 .. 1135524 - -11.7  -4.97312   AAAAGTAACCAAAAA             GCGGTGC TCGAT GCACCGC             TTTTTTATTTGCGCC 100 30
GII90_RS05810 1130151 .. 1130167 -  -2.9  -5.16237   AATTTGACTAAAAAA              GCGACAA TTT TTGCTGC              GGCCTTTTTTAATGG  70 49
        yisI 1129665 .. 1129696 -    -8  -2.70354   TTGGGTATAAATTGA      GCGGAAATGCGGC GAAGGAT GCCGC-TATCCGC      CTATGGTGATTTTTG  63 204
GII90_RS05800 NONE
       gerPB 1128987 .. 1129000 -  -3.7  -3.24747   CTTTCATATGATTAA               CGGCC AGGA GGCTG                GAGCGGGACCAATGA  48 8
GII90_RS05790 NONE
       gerPD NONE
GII90_RS05780 1127741 .. 1127755 -  -2.1  -3.86194   AATTGCTGGCATAAA               CGACA CCCTT TATCG               AAGTCTCTGTTTATT  51 39
GII90_RS05775 1127490 .. 1127516 -  -8.8  -4.88129   AAAAATGACTAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCGTTTCCA 100 28
GII90_RS05740 1114312 .. 1114333 - -10.2  -5.27335   CTGTCCAAATAAAAA           GAGGGTTC TTTTTT GAACCCTC            TTTTTTACGCTGCCA 100 30
GII90_RS05730 NONE
GII90_RS05725 1109826 .. 1109858 - -12.3  -3.49951   TATATCTTTATATAA      GAAAAAGAGGTTA TTCATTT TAACCTCTTTTTC      AATCGTAAGTCGTCA  90 168
        ntdA NONE
        ntdB NONE
        ntdC 1105435 .. 1105454 -  -7.9   -4.8048   CCCCTATATGAAAAA            GCAGGAA AGTAAA TTCCTGC             TTTTTTAGTAACTTC  88 54
        glcP 1104053 .. 1104070 - -11.3  -5.63517   TTTTTAAATAAAAAA             CACGCAC TGCG GTGCGTG              TTTTTCGCTTTGTTT 100 161
GII90_RS05675 1099966 .. 1099980 -  -2.8  -3.11341   AAGCGTACTGAAAAT               GATGTC GCA GATATC               GCAGCACATGTCATT  45 164
GII90_RS05670 NONE
GII90_RS05665 1098204 .. 1098241 - -15.3  -3.66178   CCTGTGAACGGTAAA   TAAGAAAAAGCAATCTGG TGT CCAGATTGCTTTTT-TTA   TGCTTAGGCCGCCTG 100 29
GII90_RS05655 1096778 .. 1096810 -   -12  -4.08042   GGTATTAGAAAAATA      GGAAGGAGCTGACC GAACA GGGCAGCTCCTTTC      ATAAAGCTATGCCGT  93 32
GII90_RS05645 1095645 .. 1095665 - -14.1  -5.21236   AACGGATAATAAAAA            GCCAATCCT TGA AGGATTGGC            TTATTCGCTCTGCTT 100 26
GII90_RS05635 1093120 .. 1093137 -  -8.5  -5.10077   AAATATTTGAAAAAA             CGTTCAT TAAA ATGAACG              GTTTAATCGAGATCT 100 28
       hemAT 1091673 .. 1091692 -  -4.2  -5.54192   ATGAACGCAAAAAAA            CCGGCC GTATGGCA GACCGG             TTTTTGATGGTTATT  84 36
GII90_RS05625 NONE
GII90_RS05620 NONE
GII90_RS05615 NONE
        phoE 1087790 .. 1087817 - -11.4  -5.09762   TGCTAAGAAATAAAA        GAAAAGACAGGC AAAC GCCTGTCTTTTT         CTTATTTGATAAAGC 100 27
        aprE 1083471 .. 1083496 -  -9.1  -5.38054   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTACTATTATTG 100 35
GII90_RS05580 1081607 .. 1081639 -   -18  -4.63218   TTTGCCCCAATAAAA      TGAAAAAGCGAAGC GGTTA GCTTCGCTTTTTCA      TTTTCAATCCTTTGC 100 29
GII90_RS05555 1077167 .. 1077197 - -16.3  -4.63089   TATGTGAAAAAATAA       GAAAATCCCACGC GTAAG GCGCGGGATTTTC       GCTCATTACAAATCG 100 31
        gltT 1075611 .. 1075636 - -18.3  -5.32699   TTAAAGATTAAAAAA         GCCTGCGGGGC AAGA ACCCCGCAGGC          TTTTCATTAACCAGA 100 32
GII90_RS05535 1073738 .. 1073764 -  -8.1  -2.62244   TGTTTCAATAAAAGG        TCCAAGC-AGCA GCAA TGCCCGCTTGGA         AAAATGTGAATGGAA  65 78
        fabH 1071819 .. 1071844 - -13.5  -5.38054   CTTCATAAAGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTGTTACATC 100 34
        hmoB 1062292 .. 1062312 -   -14  -4.43307   CTCCCAATAAAATAA            GCTGCCGG ACATG CCGGCAGC            TATTCGACAGCGAAA 100 25
GII90_RS05485 NONE
GII90_RS05480 1060488 .. 1060502 -  -2.8     -2.55   GAATATTTCAACTCA               TGCTGT TTT AAAGCA               TCATCACAGCTGCGA  41 18
        sndC 1059201 .. 1059226 - -11.9  -4.12738   GGATATTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTTATAGCTGA  93 31
GII90_RS05455 1055587 .. 1055610 -  -8.2  -5.18371   GTTCACAAAATAAAA          TAACCTCATC TTAT GATGAGGCCA           GGCGTTTTGCGATAG 100 12
        serC NONE
        trpP 1053693 .. 1053714 - -12.3  -5.40072   CTCTGTTCAAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTGACAATT 100 39
GII90_RS05435 1052932 .. 1052954 -  -6.3  -5.75342   TTCGGCCAAAAAAAA          TACGGGTCCA ATTT TGG-CCCGCA           TTTTTTTCTTTTGAA  91 48
GII90_RS05430 1052033 .. 1052069 -    -3   -5.0916   CTGGCAACACAAAAA   GCGCAAGGATTTGTAAC CTTT GATA-AGCTCCTTGCGC    TTTTTGCCGGACAGC  73 144
GII90_RS05420 1051020 .. 1051032 -  -6.9   -2.5763   ATAGAATAAAATGAT                GGGAG ATT CCCCC                TCTCTCTGAACTGTC  60 117
GII90_RS05415 1050786 .. 1050830 -   -16  -3.39895   GGCTGTACTAATCAA CATAAAAAAGCATAGCTGCT TAATC AGCAGCTATGCTTTCTTTCG TATTTACACTGTAAA 100 29
        prsA 1049411 .. 1049437 - -22.4    -5.626   CATCGCATAAAAAAA         GCTGTGCGGCTC AAT GAGCCGCACAGC         TTTTTTTATTATTTA 100 34
GII90_RS05365 1041235 .. 1041267 -  -5.5  -2.81195   AGAACTGAAAAAAGT      GCTATCCCTTGAGCG CAG CGCCCAAGAGAGAAT      GAGAAGGACCAAGGA  50 119
        khtS NONE
        khtT 1039493 .. 1039503 -  -5.4  -3.82946   CGACTTCAAATACAA                 GATG GTC CATC                 GGGGCTCACACGCCC  63 31
        khtU 1038258 .. 1038279 - -14.5   -4.3179   TGAAAAAACGACAAA           GCAGCACTG ATTA CAGTGCTGC            TTTTTTTATCCCTGT 100 31
GII90_RS05330 1034191 .. 1034212 - -11.7  -4.56133   GGCTAATAAGCAAAA           TCCCTTCTT GGAT AAGAAGGGA            TTTTTTATTCACTCA  95 38
GII90_RS05315 NONE
        yheD 1029866 .. 1029889 -  -8.9  -3.89695   TTTGGATAAAGATAA          GCCCGCTTT ATTAAA AAAGCGGAC           AGGTTACGAAGGCCA  80 29
GII90_RS05305 1029505 .. 1029525 - -11.2  -6.02919   TGAGAAATAAAAAAA            GCTTAGCC GTTTA GGCTAAGC            TAGTCATAAATATGA 100 25
GII90_RS05300 1029070 .. 1029092 -   -17  -4.77173   GGGTGACAAAATAAA           GAGAGCGCGG AAA CCGCGCCCTC           TATAGCCATATATTG 100 46
GII90_RS05295 1028878 .. 1028894 -  -2.3  -3.20028   TTCATTATAAAAGGA              TGTTC TCAGTTT GAACA              GCGCGGGAAAGAATA  43 14
GII90_RS05290 1028186 .. 1028207 - -11.7  -4.63542   CATAACGCTCAAAAA           CCCAAAACA ATCG TGTTTTGGG            TTTTTGGTTTATGTA  95 42
GII90_RS05270 1023438 .. 1023458 - -11.9  -4.45115   ATGAATATAAAAGAA            GTGAGCACA GGG CGTGCTCAC            TTTACAATCAGGACG 100 22
        nhaC 1021939 .. 1021963 -  -7.9  -4.81082   AATGAACGAAGAAAA         GAG-CCCGCT TTTTAC AGCGGGGCTC          TTTTTATTTTTTAAC  88 29
GII90_RS05255 1019916 .. 1019938 -  -9.1  -4.72272   TTTGGGCATGAAAAA           GTGAGCCGC TTTAT GCGCCTCAC           TTTTTTATTCATGAA 100 30
GII90_RS05235 NONE
GII90_RS05230 NONE
        crcB 1015793 .. 1015809 -  -6.5  -3.42256   ATCGATTCAAGAAGA              CGTCGAT ACG ATCGGCG              GGCTGATATTAAAAG  59 251
        cueR 1012486 .. 1012512 -  -7.4  -3.51329   TATGTCCAATTAGAA         CCTTCACTCT AGCAATG AGAATGAAGG         TAACACCTCCTGTTA  67 53
GII90_RS05205 1011111 .. 1011144 - -16.3  -4.17089   CTGAAACTGTGAAAA     TAAGAAAAGCACCCT ATAC AAGGTGCTTTTCTTA      TTATGCTTCCTGCTG 100 26
        sigM NONE
GII90_RS05185 NONE
GII90_RS05180 1007293 .. 1007310 - -11.3  -5.32944   GGTATAACGAAAAAA             GACGCCT GAAA AGGCGTC              TTTTTTAAAAGCCAA 100 30
GII90_RS05170 1005307 .. 1005328 - -11.5  -5.06451   TATCATTTTAAAAAA           CAGGCTCCG TTTC CGGGGCCTG            TTTTTTATTTAATAA 100 34
        citR  999098 ..  999115 - -11.3  -4.53705   AATTTTTAGAGAAAA             CCCGTTC ATTG GAACGGG              TTTTTTTCATTAGAC  95 65
        phoA  996140 ..  996163 -  -9.6  -5.29782   GATATTTATAAAAAA          GAGGATGCAG CGTT CTGCATCCTT           TTTATTTTCCAGTTT 100 27
GII90_RS05125  992998 ..  993043 - -13.5  -6.11019   AAAAATGAAAAAAAA GGAATTAAAAAACATGCACCC AGCT GGGTGCATGTTTTTTGCTTAC ATGTCATTCGGCGGA 100 22
        nsrR  992479 ..  992502 -  -5.4  -5.63504   AAGGGCATAAAAAAA          GAAGGAAT CTTAATCT ATTCCTTC           ATTTTTAAAAGCTTC  88 16
        lytF  990840 ..  990864 -   -10   -5.4505   GGCTCTAATAAAAAA          CTGTACAGCC GTTAA GGCCGCACAG          TTTCTGTTTTTAGAA 100 35
GII90_RS05105  990039 ..  990060 - -15.9  -3.93057   CGCAAAAGCAGGAAA           TCCCGGCGT CTAA ACGCCGGGA            TTTGTTTATGTGAGA 100 31
GII90_RS05035  974680 ..  974699 -   -10  -4.67353   CGAGTGACTTAAAAA            GCCG-AGGC AGT GCCTGCGGC            TTTTCTTCATGAAAA  91 32
GII90_RS05020  969654 ..  969690 -  -2.4  -5.51165   AAAATTTGAAAAAAA   CAGTGCGGCATTGGATAG TAT CTATCCAATGC--CTTTG   TTATTAGTGAAGTCC  81 29
GII90_RS05005  967470 ..  967493 -   -14  -4.43213   CGTAACATATGAAAA          CGTGTAATCC AAGA GGATTACACG           TTTTTTTAACGGCCA 100 31
        dgcK  964574 ..  964589 -  -2.4  -5.68023   TCAGAAGCAAAAAAA              GCGGGC TTGA ACCCGA               AAAAGCATACGCTAA  86 252
GII90_RS04985  963304 ..  963323 - -12.2  -5.45802   TTGTCAAAATAAAAA            CTGCAGGT TTGC ACCTGCAG             TTTTTCATATCAATT 100 46
GII90_RS04885  946290 ..  946308 -  -8.9  -4.62069   TTTTTATGTGAAAAA             GAACACG GTATT CGTGTTC             TTTTACGTAAGCCAA  90 28
GII90_RS04875 NONE
GII90_RS04870  945268 ..  945293 -  -9.7   -5.4505   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 10
GII90_RS04835  938583 ..  938600 -  -9.1  -5.88197   CTAAATATAAAAAAA             CCCGCTG ACTA CAACGGG              TTTTTGCATTTCTCC 100 42
GII90_RS04825  936756 ..  936781 - -14.9  -6.13503   TATCAATAAAAAAAA         TGAAGATGGAG AATG CTCCATCTTCA          TTTTTTTAGAAAAAC 100 31
GII90_RS04810  933581 ..  933612 -   -16   -5.5112   TGGAGCAATAAAAAA      GAGACGGCATCTCA TCTT TGAGATCCCGTCTC       TTTTTGTGGTCTTTG 100 74
       spo0M  932387 ..  932408 - -13.1  -4.70659   CGGTATACTGAAAAA           CCCGTTTCT TAAC AGAAACGGG            TTTTTATTTTTTATT 100 72
GII90_RS04695  924013 ..  924041 -   -14  -4.86773   GAAAATCATTAAAAA        TAAGCTGACCGC ACGAA ACGGTCAGCTTA        TTTTATTTCGACATT 100 28
GII90_RS04680  921499 ..  921517 - -13.2    -5.626   GATTCCATAAAAAAA             CAGGAGCT CAA AGCTCCTG             TTCAAGGTATTTGAT 100 42
GII90_RS04675  920235 ..  920252 -  -9.1  -5.71712   TTGTATATAAAAAAA             CCCGGCT GTTT AACCGGG              TTACTCTTCTGTTTC 100 26
GII90_RS04645  915824 ..  915843 - -10.7  -3.42346   AAGATGGCAGGAGAA            GCAGCCG CCATCT CGGCTGC             TCCGTAAACCATTCT  80 40
GII90_RS04635  913534 ..  913557 - -14.6  -4.76312   TATAAGACGTAAAAA          GCCCGGCTCT ATAT AGAGCCGAGC           TTTAATTTTTTCTGA 100 10
GII90_RS04600  907169 ..  907189 - -11.2   -5.1361   ATAAAGGGTAAAAAA            CAGCTGCA GTGTA TGCAGCTG            TTCTTCTTTACCGTT 100 33
GII90_RS04580 NONE
GII90_RS04575  903517 ..  903531 -  -5.8  -3.87956   AAAAGTGATATCAAA               CAAATA TAG TATTTG               GTTTTAAGGGGCTAT  65 47
GII90_RS04570  903261 ..  903287 - -16.7  -5.22039   CTGAAATGTAAAAAA         CCCCTTGTCTC AAACG GAGACAAGGGG         TTTTTCATTAACGAG 100 33
GII90_RS04545  898422 ..  898445 - -15.4  -5.46698   GGCAAAAGCAAAAAA          GACTCCGTCT AATA AGACGGAGTC           TTTTTTTATTTCGTT 100 31
GII90_RS04535  895171 ..  895200 -  -7.1  -5.95539   TGTCAAATAAAAAAA       GCCTG-CTCCCGCA GTT TGCGGATGACAGAC       TTACTGATTTATTCT 100 34
GII90_RS04530  893165 ..  893178 -  -3.8  -2.88663   AGCCAGCTTGACACA               CCGT ACCGGG ACGG                TGGATGGACCGTTCG  46 389
GII90_RS04520 NONE
GII90_RS04515  891021 ..  891042 - -15.9  -4.41633   CAGGGTGAAAAACAA           GCGGCAGGA GGGC TCCTGCCGC            GTTTCTTTACTTCTC 100 32
        padR  888215 ..  888235 - -11.2   -5.0538   TCCGAGCCTAAAAAA            CATCTGCC GTTTA GGCAGATG            TTTTTTTGCATGTGG 100 73
GII90_RS04415 NONE
GII90_RS04410 NONE
GII90_RS04405 NONE
GII90_RS04400 NONE
GII90_RS04395  865304 ..  865314 -  -5.4  -2.85606   TTATAGAGGAGGAGA                 GCTT TTA AAGC                 TTCGGATGATTCTCA  52 19
GII90_RS04390  864901 ..  864923 - -14.2  -5.34309   AGGATTAAACAAAAA           TGGCCCGCTT CAT AAGCAGGCCA           TTTTGTTATCCGCGC 100 31
        corA  850413 ..  850431 -  -6.7  -5.55769   GCTTACAACAAAAAA             GAACAGC TGCTC GCTGTCC             TCATTTAAAAATATT  93 26
GII90_RS04320  849446 ..  849465 -  -9.3  -3.82656   TGTAAAAGAGAAAGA            CCTCTCC TTAAAC GGAGAGG             CTTTTCTTTATTTTA  83 33
       yfkAB NONE
        mscC  846219 ..  846239 - -10.5   -5.7827   AAGATAAATAAAAAA            CTGATTCCA ACT CGGAATCAG            TTTTTTTGTTTATTG 100 35
GII90_RS04280  842915 ..  842939 - -14.3  -4.49311   ACCATTAGCATAAAA          GCCTCCTGACA TGA TGTCGGGAGGC          TTTTTGATTAAGAAG 100 33
GII90_RS04260  840643 ..  840666 -  -8.8  -5.42265   GGAAATGATAAAAAA          GACTCGCCGA GTTT CCGGCCAGTC           TCCATTATTTACGAA 100 30
GII90_RS04255  839356 ..  839375 - -10.7  -5.74288   AGAAATAAGAAAAAA            CGGACGC TCTTGG GCGTCCG             TTTTTTTGTTGCTTA 100 38
GII90_RS04245  834172 ..  834192 - -16.9  -4.67697   GTTTAAAAGAAGAAA            GCTGCTCGC ATA GCGAGCAGC            TCTTTTTTATGCCTG 100 32
GII90_RS04220 NONE
GII90_RS04215 NONE
GII90_RS04210 NONE
GII90_RS04205 NONE
        ltaS  821104 ..  821125 - -15.9  -5.63517   CTGTCAAATAAAAAA           GCGGAGAGG GCAA CCTCTCCGC            TTTTTCTTATTTATC 100 32
         map  818796 ..  818815 -  -3.4  -3.62096   TTGGAGGAGGTTAAA            CCTGCCGG AAGC CCGGAATG             TGTTTTACAGTTTCG  50 30
GII90_RS04170  818396 ..  818416 - -15.4  -4.34759   GACAATATCAAGAAA            GCCGGGCG CATAT CGCCCGGC            TCATGTTTTATTGTT 100 33
GII90_RS04165 NONE
GII90_RS04160  817834 ..  817857 -   -11  -5.47159   GTTGAATAGAAAAAA          GCCGCGCA TATCAACG TGCGCGGC           TTTGCCATATTTAAG 100 36
GII90_RS04150  816781 ..  816793 -  -2.7  -3.40403   CCGCTCCTATGATAA                CTCAA TCG TTAAG                CCGAACTATTTTTAT  46 52
GII90_RS04100  805915 ..  805938 -  -3.1  -3.72893   TATTTTTTTAGTAAA          GAAAGCTGC GTTTTT ACTGCTTTC           TCATGAAAGCATCAT  52 15
GII90_RS04095  804840 ..  804862 - -10.6  -3.80855   GGTTGCAAAAACGAA           GAAGCAAGGA TTC CCCTCGCTTC           TCATTTGTCCTATTT  86 35
GII90_RS04090 NONE
        yfmE NONE
        yfmF  801945 ..  801967 -  -9.8  -3.72395   ATAAGGGAAAATGAA           GGCTGTCACG TTT CTCGACAGCC           CTAGGGAATTCCTCT  84 46
GII90_RS04070  798328 ..  798338 -    -4  -4.15044   CTTTTGGTCAATAAA                 GTAA TGT TTAC                 TTATTAATTAAACAC  58 83
GII90_RS04065  796861 ..  796879 - -11.7  -4.80455   CATCGAAACACAAAA             GGAGGGC AAAAA GCCCTCC             CGTTTTCATCTTCAT 100 41
GII90_RS04050  793437 ..  793456 -  -8.5  -5.16237   AATGGCAGTAAAAAA            CCCGCCC TTTAGC AGGCGGG             TTTTTTTATAAATTA 100 38
GII90_RS04010  784507 ..  784530 - -14.6  -5.31158   TAAAAAAAGGAAAAA          GCCGGCGGGTG AGG CACC-GCCGGC          TGAAAAGAGATTATT 100 36
GII90_RS04005  783728 ..  783757 - -11.6  -4.49556   TTCTTATGAAAGAAA       TACCGTCAGCCTG ATTAG CAG-CTGACGGTA       TTTTCGATATTCAAA  95 10
GII90_RS04000  782376 ..  782397 - -11.5  -5.14965   AGCTGGATTAAAAAA           CCCCCTGCC GCCT GGCAGGGGT            TTTTTCAGCTATGCC 100 30
GII90_RS03960  770522 ..  770543 - -11.7  -4.51363   TATTAAATAGGAAAA           GTCCAGAAA GTGA TTTCTGGAC            TTTTTAGTCTTGCTC  95 29
        yetL  768672 ..  768693 - -14.5  -5.72622   GTCATAAAGAAAAAA           CAGCCGGAT GCGT ATCCGGCTG            CAGAAGAAAAGACGC 100 69
GII90_RS03925  765059 ..  765078 - -13.6  -5.82172   AGTAACATAAAAAAA            TCAGCCGG GAAA CCGGCTGA             TTATTAAAATGAGCA 100 29
GII90_RS03920  764593 ..  764621 - -13.1  -4.46233   TCAATGTCAAAGAAA        GCGCAGGGCGG AATCGAA CCGCCGTGCGC        AACAGTTTATTCTTT 100 32
        hmoA  764175 ..  764194 -  -8.6    -5.252   GACTCTTAGAAAAAA            GCTTGCAGC AAG GC-GCAAGC            TTTTTATTGATTGTA 100 29
GII90_RS03740 NONE
GII90_RS03735  726130 ..  726155 -  -6.9  -5.24129   TTGGTTTATAAAAAA         TAGCTCAGC AGAGTAGG GCTGAGCCA          TTTTTTAATTATAGA  90 34
GII90_RS03730 NONE
GII90_RS03725  725245 ..  725264 -  -2.1  -5.78622   CGACCGCAAAAAAAA            TTTTCGG TGCTGT CCGCAAA             AGGGAGTTTGGGTGT  83 107
GII90_RS03700  717864 ..  717878 -  -5.6  -4.63932   GACCCGCCAAGAAAA               GGCTGC GAC GAAGCC               CTCCTGCGGACAATT  74 227
GII90_RS03680  711032 ..  711049 -  -9.1   -5.4756   AACGCTAATAAAAAA             GCAGCCC TTAG AGGCTGC              TTTTTTTATGGTCAA 100 15
        opuE  705895 ..  705917 - -14.2  -4.57533   AACAAGAGCACAAAA           GCCACCAAGC TGC GCTTGATGGC           TTATTGCTTACTTTT 100 33
GII90_RS03655  705092 ..  705117 - -13.4  -5.03994   GTGTAGATAGAAAAA         GCCAATGGGA TTCCAG TCCCATTGGC          TTTTATAATGTATCA 100 28
GII90_RS03625  695828 ..  695867 - -13.9  -3.53224   GAGTCTTCTTCCAAA TAAA-AAACCGCCC-TGCC GTCT GGCAAGGGCGGTTTCTTTA  TGAAACAAATTGATG 100 23
GII90_RS03605  692360 ..  692384 -   -13  -5.93809   TGGGCATAAAAAAAA          GCTTGATCAC GTTTT GTGATCAAGC          TTTTCCATTTATCCG 100 34
GII90_RS03595  690512 ..  690530 - -11.7  -4.32651   AATAAGTGAGGAAAA             CCCGCAG AATAG CTGCGGG             TTTTTTGTTATCAAA  91 36
GII90_RS03480 NONE
        gabP  664205 ..  664228 -   -14  -5.14949   AAGAAAATAACAAAA          TCCTAAACGG CAGG CCGTTTAGGA           TTTGATCAGCATTAA 100 37
        cotA  662519 ..  662537 -  -8.9  -5.72622   TTCATAAAGAAAAAA             CTTGCCT GCTAG AGGCAAG             TTTGTCGGGTTATTT 100 35
GII90_RS03465 NONE
GII90_RS03460 NONE
GII90_RS03455  660200 ..  660224 -  -5.7  -5.53079   AAAACAGACAAAAAA          GCCCTAAAC GTTTACA GTTTTGGGC          TTCTTTCTTCGTATT  88 141
GII90_RS03450  659965 ..  659986 - -10.1  -5.20534   ATTAACTAATAAAAA           CCACTCGGC ATGA GCTGAGTGG            CTTTTTTAATGGATG 100 31
        bdhA  656958 ..  656981 - -15.4   -5.1925   GGATAATTTAAAAAA          GAATCCGCAC CCGA GTGCGGATTC           TTTTTGGTTTCAAAT 100 40
GII90_RS03425  653888 ..  653912 -   -10  -4.26589   ATCATACAGTGAAAA          GTCCGGAGTG ATCAG CACTCGGGAC          TTTTTTATTTAGGAG  86 30
        gutR  643780 ..  643813 -   -14  -4.45738   GACTTTAATAAGAAA     CGAAAGGCCAACTG CGACTT CAGTTGGCCTTTCC      TATTTATAATAAAGA 100 72
GII90_RS03305 NONE
GII90_RS03300  627797 ..  627820 - -12.6  -5.64873   GGCAATAATAAAAAA          TCCATTTCTC ATGC GAGAAATGGA           TTTTCTTTATTTTTG 100 32
GII90_RS03275  623584 ..  623603 - -12.2  -4.82901   TTCTGTGGATAAAAA            GCACCTCT AAAA AGAGGTGC             TTGACTTTTTTAATC 100 35
        pbuE  604205 ..  604224 - -10.8  -5.72254   CTAAATAATAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTTTG 100 14
GII90_RS03150 NONE
GII90_RS03145  601314 ..  601349 -  -4.2  -5.24551   GGAAATGAAGAAAAA    GGCATAACATAT GAGCTGTATAAA ATATGTTACGCC     TTTTCATTTGTCTAT  76 57
        phoB  599140 ..  599174 -  -7.9  -4.72272   TTCCTCCATTAAAAA     GAGATCCCGTTACTT CATAC AAGCAACGGGACACC     TTGTATTCTTTTACT  88 36
GII90_RS03130  598377 ..  598403 - -19.6  -5.44198   AACAAATAAGAAAAA         GAACTCCCGTAC CTT GTACGGGAGTTC         TTGATTTAAAACTTG 100 31
GII90_RS03110  593943 ..  593959 -  -8.7  -5.66684   GAATTCATAAAAAAA              CCTGACA TGA CGTCAGG              TTTTTTGTTTTATTT 100 39
GII90_RS03100 NONE
GII90_RS03095  591244 ..  591276 - -21.5  -4.65895   GGCTGTACTTAAAAA      CAAAGAGCCCGGAAA ACA TTCCCGGGCTCTTTG      TTTTATTTCCATTCT 100 28
GII90_RS03080  587308 ..  587329 -   -13   -5.0133   TATTTCCCGAAAAAA           GCGGCTCC ATTTAG GGAGCCGC            TTTTTTATGCTTTTT 100 30
GII90_RS03075  585750 ..  585776 - -11.7  -5.52384   TTTTCATCAAAAAAA        CTCCTGCTCTCA TTTT TGAG-GCAGGAG         TTTTGAGTCTTATTG 100 35
        vmlR  583778 ..  583795 -  -9.9   -5.4433   ACATATAAAGAAAAA             GGACAAC AGCT GTTGTCC              TTTTCAATGCCGCTT 100 53
GII90_RS03050 NONE
GII90_RS03045 NONE
        cotP  580434 ..  580444 -  -3.2  -4.37067   CAAATATGAGGAAAA                 TGCG TTA CACA                 CTTGATTATTTAAAT  62 409
GII90_RS03030 NONE
GII90_RS03025  578597 ..  578617 -  -9.7  -4.59944   ATCAGCAGAAATAAA            GCCGCCT GATAAAG AGGCGGC            AGATCGTTATATGTC  91 370
GII90_RS03020  578173 ..  578188 -  -7.6  -5.57054   AATAAGGCAAAAAAA              GAACTC AAAT GAGTTC               TTTTTTTATTCTTCA 100 31
        mneP  574175 ..  574191 -  -7.3  -5.73978   AGCATAAAGAAAAAA              CTCCTTC TAA AAAGGAG              CTTTTCATTCTTCGA 100 30
GII90_RS02990  573225 ..  573243 -  -5.3  -5.13354   TGCATAAAAAATAAA             CCCTCTA GTTAG TAGAGAG             TCAAGGGAGATCAAA  81 55
GII90_RS02985  572443 ..  572457 -  -5.8  -2.56391   ACGATTGAAACAGAT               TATTGA AAA TCAATA               TAACAGAATATTAAC  54 62
GII90_RS02980  571298 ..  571320 -  -9.2  -5.06414   TTTGTCCAAGAAAAA           TAGAGTCCAT AAG AGGGACTCTA           TTTTTTGAAGTGCCC 100 95
GII90_RS02960 NONE
GII90_RS02955  566238 ..  566248 -  -6.8  -2.90075   GCGGTTTGAATGACA                 GCTG TTT CAGC                 GTCTTTTGGAAAGAA  58 21
GII90_RS02950  565652 ..  565663 -  -4.4  -3.66356   ATTTTGAAGCGGAAA                CATC AGAT GATG                 AGGCACGATATCTAG  57 77
GII90_RS02940  564160 ..  564188 -  -3.2  -5.14563   TGTTTCACTAAAAAA        GAGATCAAGC CTAATGATC GCTTGATCTG        ATAATAACAAGGGTT  73 79
GII90_RS02930  561592 ..  561613 - -11.7   -3.1169   AGAACCTTAAAAGGA           GATACCAAC CGAT GTTGGTATC            TTTTTTGTTTTAGAG  84 35
GII90_RS02895  556032 ..  556055 -  -2.6  -3.34517   ATTTTTGGTGAAATA          CTTATTTC-TC TGT GATGAAATAAA          GCAAAGCGATGACCG  46 3
GII90_RS02885  554760 ..  554785 -  -9.8   -4.1347   TCTGAATCACAGAAA         TACCAAGGGC GTCAAA ACCCTTGGTA          TTTTTTCTGGTTATT  86 39
GII90_RS02875  553203 ..  553217 -  -2.7  -2.69468   TAGCTTTACATATGA               GGCCC TCCTT GTGCC               ATTCCCCACTTACAC  41 1
GII90_RS02870  552495 ..  552511 - -10.8  -4.00468   ACGATAACTCAGAAA              GCCCGC TTTTC GCGGGC              TCGATTGAAGCAGAT  89 53
GII90_RS02855  549386 ..  549410 - -11.5  -4.54047   CGATCGCATACAAAA          TACCAAGGGCC AGC AACCCTTGGTA          TTTTTATACCTTCAT  95 73
GII90_RS02850  548093 ..  548112 -  -6.5  -5.24796   TCTATAGAAGAAAAA            CAAGCAT AGTAAG ATGCTTG             TTTTTTCTTAGGACA  86 290
GII90_RS02825  542319 ..  542329 -  -5.4  -4.82901   GGTTCTTCATAAAAA                 GCTT GGA AAGC                 CTCTCTCCAAAAGAA  76 397
GII90_RS02815  540235 ..  540257 -  -9.3  -4.28432   AAGGTTAATTGAAAA           GCAAACTAT ATAAA ATAGTTTGC           TTTTTTTTGTTATGA  86 369
GII90_RS02805 NONE
        lrpB  531074 ..  531109 -    -4  -5.02476   ATATGCTCTAAAAAA    GCCCTAGGTTGG-ATAT GGA ATTTACCAAGCTGGGGC    CTTTTTATACATTAT  72 54
GII90_RS02750  529220 ..  529267 - -10.2  -5.40474   ATTCGTTCAAAAAAA CTAAAGGGTGATACATATTA TACATGAT TAATATGTATCACCCTTTTC TTTCTTGTTCAACAA 100 84
        cmpA  527502 ..  527521 -  -6.4  -5.09259   TATGGTAAAATAAAA            GCACTGCT TACG AGCAGTGT             TTTTTCCTATAGAAA  86 13
GII90_RS02610  514553 ..  514597 - -19.7  -4.12902   CAATCACGCTGAAAA GATGACAAAATCCTAAAATGA AAA CCATTTTAGGATTTTGTCAAC AATCTGAAGCGGCGG 100 41
GII90_RS02580  507279 ..  507306 -  -9.3  -5.26907   GAAGACAAAATAAAA        CATGAACACGA TGTCAC TCATGTTCATG         TTCATGTAGAGCCTG 100 69
        fbpA NONE
        fbpB  505901 ..  505915 -  -7.1  -5.96219   GAGTCATAAAAAAAA               GAGCC TTACC GGCTC               TTTTTATGTATTGTT 100 29
        dctB NONE
GII90_RS02515  495306 ..  495328 -   -15  -4.01939   GAAGGCATAATCAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTCTCTTTACTCG 100 34
GII90_RS02490  492528 ..  492541 -  -3.9  -3.87075   ATCACCTCTCATAAA               TGATT TACC AATCA                ATAACCGCTCCTGAT  56 70
GII90_RS02485  492207 ..  492233 - -12.4  -4.96848   GGTCCCATATAAAAA         GACATCGTTTCA TTT CGAAACGATGCC         TCCTGTATCTAATGA 100 43
        mntH  490716 ..  490744 - -13.3  -4.56597   GCTTTTGCGGAAAAA        TAAAAACCGGCTT TAG AAGCCGGTTTTTT        TATCGAAACGTATCT 100 25
GII90_RS02475  490286 ..  490325 - -13.9  -4.74013   TCGAAACAGACAAAA  GGACAAATGCATCTT GTTTCAAAGG AAGATGCATTTGTCC   TTGCATGCTTATTCT 100 74
GII90_RS02415  475144 ..  475166 - -13.5  -4.44667   GGTTTTAATAAGAAA           GGCTGGATC ATAAA GATCCAGCC           TTTTTGCGCTTCCTT 100 39
GII90_RS02385  470536 ..  470571 - -12.7  -4.45083   TGTACATTCATAAAA    GAAGAAGCCCGTCCAC TTTAT GTGG-CGGGCTTCTTT    GCAGTTGCACAGACG 100 7
GII90_RS02360  462674 ..  462693 - -10.7  -4.53303   CAGTTTCATAGAAAA            CGCGCCT CATGAC AGGCGCG             TTTTTTATGTGTGAT  95 425
GII90_RS02310  455342 ..  455365 -  -9.6  -5.85011   GAAAAATGAAAAAAA          CCCTTCACAA CATT TTGTGAGGGG           TTCTATTTTGTGTCG 100 28
GII90_RS02300  453868 ..  453879 -  -5.8   -4.9218   CATTCATGACAAAAA                GAGC GGCC GCTC                 ATTTGTCAAACGTTT  78 395
        ycnK NONE
        ycnJ NONE
GII90_RS02255  445736 ..  445762 - -11.6  -5.19879   GGTTAAACATAAAAA         GCGACCCAGACA TGA CATCTGGATCGC         TTTCTTTATTAGGCA 100 34
        gabR  439424 ..  439450 -  -2.3  -5.85244   AAGCAAAAGAAAAAA        CGTGCAGCACCT GTGC AGATG-TGCAGG         TTGCCAAATCGACTT  91 197
GII90_RS02220 NONE
        nfsA  438078 ..  438102 - -17.9  -4.06055   ACCGGGTAAATGAAA          GGCCTGCCGGA AAA TCCGACAGGCC          GAATAAGAGCTTATT 100 36
GII90_RS02210 NONE
GII90_RS02205  435596 ..  435620 - -12.2  -5.13016   AAGTAAAACCAAAAA         GAGCCTCCGCT AAAT AGCGG-GGCTC          TTTTTTTGTTAATCA 100 38
GII90_RS02180  430187 ..  430208 - -15.9  -5.71712   GGTGATATAAAAAAA           TAGCGGGCG CTGC CGCCCGCTA            TTTATGTACGATTAA 100 37
GII90_RS02175  429916 ..  429928 -  -3.4  -4.12942   GCAAATGCTGCAAAA                CTGT GGCGG ACAG                GGTCCCGCAGAGACG  57 50
GII90_RS02170  429732 ..  429756 - -18.7  -5.40072   TTCTTTTCAAAAAAA          CACCGCAAGAC ATA GTCTTGCGGTG          CCGCCTTCATGGAGA 100 51
GII90_RS02145 NONE
GII90_RS02140  423698 ..  423740 -  -7.8  -5.65513   GAGGAAGCAAAAAAA TGATAAAAAGAGCGGGGG GATGCGG CCGCCGCTCTTTTTATGT TCACTTCTATATAAA 100 90
GII90_RS02120  418922 ..  418950 -  -7.4  -2.71144   GACGCGTTTGAAGCA        GTGCCGGAATCA TATTC TGTTTCCGTCAC        AAACAATGCCGGCGC  58 435
GII90_RS02110  415797 ..  415824 - -17.8   -5.5112   TTGATCAATAAAAAA        CAGCCCGCAGAT CAAC ATCCGCGGGCTG         TTTCTGATTATAAGA 100 33
        bsdA  411102 ..  411118 -  -2.3  -5.65927   TATTGAAATAAAAAA              TTAGCTT ACA AATCTAA              AGGATAACTTTTTTT  80 82
        tcyA NONE
        tcyB NONE
        tcyC  408726 ..  408766 - -18.7  -4.12902   CAATCACGCTGAAAA  TCACAAAATCCTAAAACGA ATA TCGTTTTAGGATTTTGTCA  ATAATCTGAAACAGG 100 64
GII90_RS02060  407816 ..  407834 -  -9.6  -6.14618   GAGAAAATAAAAAAA             CAAAGCCA AGG CGGCTTTG             TTTTAGTGTACAGGC 100 28
GII90_RS02055  406926 ..  406941 -  -4.7  -4.65838   CATAGACTGGAAAAA              CAAGG GGTTCT CCTTG               AGGCGATAGACCGTC  71 142
GII90_RS02045 NONE
GII90_RS02040  404039 ..  404073 - -13.8  -3.10975   ACCCACCATTCAATA     TAAAAGGATCAGCACT GTC AATGCTGATCCTTTTT     AAATTTGAGTTTTTT 100 8
        hxlA NONE
        hxlB  374171 ..  374191 - -16.9  -5.49579   TTAGAAAAAATAAAA            CCGGCCTGA TCT TCAGGCCGG            TTGTGTGATGCTATT 100 36
GII90_RS01995  372370 ..  372388 -  -5.3  -2.59458   AATGATAGTAAGTCA            TC-AGCCG TTTT CGGCTTGA             TTAATCATTTTAAAT  51 7
        nucA NONE
         nin  371296 ..  371320 -   -10  -2.73034   AAAGTTTATAAAGAG          TCCCTGAGAG TTATT CTCTCAGGGG          TTTTTCATTACACAG  74 33
GII90_RS01960  367602 ..  367618 -  -5.1  -2.97475   CGTCCGATTACAAAT              CAACGTC CTG AACGTCG              GCATCAATTTTTTTT  52 1
GII90_RS01955  366863 ..  366882 - -11.4  -5.82172   ATCAATAGAAAAAAA            GCCGTCCC ATGG GGAACGGC             TTTTTTTAATGAAAC 100 47
        nasB NONE
        nasC  357889 ..  357899 -  -2.6  -4.66264   GAAAAGTTCTAAAAA                 TTTT ATG AAAA                 ATTTAAATAGGTATG  62 28
        nasD NONE
        nirD  354980 ..  355000 -  -7.6  -3.93769   ACTGTAAAAAATGAA            GGACCACT AGAAA AGTGATCC            GGTCTTTTGATCAAT  74 36
        cobA  353470 ..  353491 - -10.2  -4.99043   GGTGCATAAATAAAA           CAGCCCTT GAGGAA AAGGGCTG            CTTGCCATCAGGTGT 100 33
GII90_RS01895  351327 ..  351346 -  -3.6  -3.94438   CAGCTGAAGAAAAGA            TGATTGTG CTGT CACAATAA             AACCTCCGCTCATGT  56 120
GII90_RS01890 NONE
GII90_RS01885  349563 ..  349586 - -12.6  -5.88476   AAAAGAAATAAAAAA          GAAACCAGTA CTTG TACTGGTTTC           GTCTTCACTTAAAAT 100 34
GII90_RS01845  340188 ..  340206 -   -16  -4.66609   CAGCCGATGTAAAAA             GCCGTGCG CAG CGCACGGC             TTTTTTTATCGTTTT 100 31
        tmrB  338716 ..  338734 -   -16  -4.22591   AATAAGTTGAAGAAA             GCCCGCTC TCG GAGCGGGC             TTTTGTCGTGTACAG 100 46
GII90_RS01820  335313 ..  335332 - -13.6  -3.30412   AAGACGAAAAAGAAT            GGCCGGAA GACA TTCCGGCC             GATCCTGAGCATTAT 100 384
GII90_RS01800  332005 ..  332029 - -17.3  -5.47159   GTGTAATAGAAAAAA          GCAGTACATGC CCA GCATGTACTGC          TTTTTTTATGTTAAT 100 36
GII90_RS01770  323608 ..  323626 - -14.6  -5.32565   GAAGTAATCAAAAAA             GCAGCCTG TGT CAGGCTGC             TTTTTTTGCGTTAAG 100 36
GII90_RS01750  320013 ..  320027 -  -4.2  -4.61868   TATGTATAGAGAAAA               CCCTTT GTT AGAGGG               TTTCCAAAAAGCCAG  68 18
GII90_RS01745  318532 ..  318551 - -12.2  -4.46656   GCTAGAATAGGAAAA            GCACCTCT TAAA AGAGGTGC             TTTCAGCGTGTCGAC 100 253
GII90_RS01705  310450 ..  310473 -   -14  -4.46656   CCGATAACATGAAAA          GCAGTTTTCC CTAG GGAAAACTGC           TTTTTTTATAGAAAC 100 31
        cwlK  303309 ..  303327 -  -4.5  -2.63596   CCTGATTTTACAGCA             GGCAGTG ACCAG CACTGCA             AACTTGTCTATAAGC  46 101
GII90_RS01655 NONE
GII90_RS01650  299002 ..  299026 -   -13  -5.63517   TTTTCAAATAAAAAA          GGAAATAGCC GTCAT GGCTATTTCC          TTTTGGTGTTTTATT 100 36
        natR NONE
        natK  294184 ..  294208 - -15.9   -5.1925   TCATAATGGAAAAAA          CCTTGAAAAGC CAG GCTTTTCAAGG          TTTTTTTATTTCTGA 100 31
GII90_RS01615  292455 ..  292479 - -14.5  -5.34655   TAATGAAAAACAAAA          CCTTGAAGAAT GCT ATTCTTCAAGG          TTATTCTGCTTTCAG 100 26
        lmrA NONE
      lmr(B)  288221 ..  288243 - -10.6    -4.946   AGTAAACATGAAAAA           GCCCCTGA ACACTAG TCAGGGGC           TTTTCATATTAATGA 100 34
         pcp  286361 ..  286371 -  -8.2  -3.70709   ATGAGGGAAGAAACA                 GCGG CGG CCGC                 TTAGTGCAGCGTACC  74 26
GII90_RS01550 NONE
GII90_RS01545 NONE
GII90_RS01465 NONE
GII90_RS01460  262292 ..  262330 - -11.1  -4.86939   CAATAAACGCAAAAA   GAGAAAGGTGTTCAGCC CATAT GTCTGAACACCCTTTTC   TTATGATATTTGTTT 100 26
        mmuM  261182 ..  261206 -  -9.4   -5.4505   CTTCCTAATAAAAAA          TCTCATGTCA GAAAG TGACACGAGA          CTCCGGCGAACCGGC 100 74
        mmuP  259697 ..  259718 - -14.5  -4.87318   GTGAAAATCGAAAAA           GAACCTGCC CGGA GGCAGGTTC            TTTTTATTTTGAATG 100 29
        nagB NONE
GII90_RS01420  254481 ..  254501 -  -9.7  -4.57073   TATGTTGGCGAAAAA            GTCCCCC GCAGCAG GGGGGAC            TTTTTTACTTCATTT  91 30
GII90_RS01415  253087 ..  253109 - -12.1   -5.7946   TGCTGAATAAAAAAA           GAACACCTC GTATT GAGGTGTTC           TTTTTTTCTATATGC 100 33
GII90_RS01355 NONE
GII90_RS01350  241507 ..  241526 -  -8.6  -6.14618   GACAAAATAAAAAAA            TGGATGCC GTTA AGCATCCA             TTTTACATCCGTTCT 100 15
GII90_RS01345  239196 ..  239229 -  -8.3  -5.75822   GATAAACTAAAAAAA     CTGCATGAGCATA TTTTAACT TATGTTCATGCAG      TTTTGTATTAAAGTT 100 39
GII90_RS01340  237745 ..  237776 -  -7.4  -3.90286   GAGGACAAAGGGAAA      GCATCTCTGATT TCGAGATT ATTCAGAGATGC       TTTTTTTGTATTTTT  71 492
        glpT NONE
GII90_RS01315  232581 ..  232602 - -10.2  -4.91357   AAATATAGAAGAAAA           CCTTGCGA TAGTTG TCGCAAGG            TTTTTTGCTTTTAAT 100 36
GII90_RS01305  230386 ..  230410 - -10.1  -5.01042   AAGTTAAATTAAAAA          GCTCTCTTC CTTTATC GAAGAGAGC          TTTTTGATTACTTCT 100 33
      blaOXA  228117 ..  228145 -  -7.3  -2.82516   GTTTTGAGCATGAGA        TTTAGAGCCCTGC CGT GCAGGGCTCTTTT        ATTTAGGATGTAATC  61 28
GII90_RS01270  223648 ..  223665 - -12.7  -5.56673   ACGGAGAATAAAAAA             GAGCCGG ATAA CCGGCTC              GGTATAAGTTAAAAC 100 34
GII90_RS01265  222435 ..  222449 -  -4.2  -2.81642   AGATTATTGAGGATA               CATGCA GGC TGCTTG               CGATTACTTATGAGC  45 394
        alkA  201984 ..  201996 -  -5.5  -3.90318   TTAGCATGCTAGAAA                TCCGA AAA CCGGA                GAGCCTATTGGAATG  63 175
GII90_RS01090 NONE
GII90_RS01085 NONE
        murQ NONE
GII90_RS01075 NONE
GII90_RS01070 NONE
        amiE  187973 ..  187985 -  -4.1  -2.56011   TAAGCGGAAAGACAG                GTCTC ATA GAAAC                TTCCTCCTATCGTCT  45 47
        nagZ NONE
GII90_RS01055  184716 ..  184741 -  -9.1  -5.55664   TTAGCATGAAAAAAA         CCCTTACTTAT GTGT AAAAGTAAGGG          TCTTTCGTTCAATAA 100 77
         btr  182991 ..  183018 -  -2.9  -3.42083   TGAACAGATATAACA        CCATGGACAAAT TCCTG ATTTAT-CATGG        ACAATCTCCGGATAG  46 20
        feuA NONE
GII90_RS01040 NONE
GII90_RS01035 NONE
GII90_RS01030  179190 ..  179209 -  -9.3  -5.66684   GAAGGCATAAAAAAA            CCGCTCA TAGGGT TGAGCGG             TTTTTTCCGTATAGC 100 10
GII90_RS01015  175921 ..  175939 - -14.6  -3.69434   CCAAGCAAGCTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTTATAT 100 149
        pdaB  159195 ..  159209 -  -2.8  -3.23921   TATAAAGCAAAAGCA               GTCCTC TAA GAAAAC               ATTTGTGTCATCGTT  45 186
        gerD  158073 ..  158103 -  -7.5  -4.42653   AGTGCAGGTATAAAA       GGTGAACCGGGAT TCCAG ATCCCGGCTTTCC       CTTTATTCACTTTCT  82 28
        abrB   44396 ..   44419 -  -9.7  -5.87996   TAAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTACAAGAA 100 45
GII90_RS00115 NONE
GII90_RS00110   23447 ..   23471 -  -7.2  -5.52384   CCCCCATGAAAAAAA          GACGTTTCCA AATTA TCGAAACGTC          TTTTTGACAACATTA 100 13
GII90_RS00105 NONE
GII90_RS00100   22069 ..   22090 - -11.7  -5.28942   TATTTTAAAGAAAAA           GTGAATCTC GACT GAGATTCAC            TTTTTTTGATTATCA 100 22
GII90_RS00065   14408 ..   14426 - -14.6  -3.69434   CCAAGCAAGCTTAAA             CCCAGCTC AAT GAGCTGGG             TTTTTTGTTTGTTAA 100 37
