CLD04_RS00005	SSF48295	TrpR-like
CLD04_RS00005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00010	SSF55979	DNA clamp
CLD04_RS00015	SSF55174	Alpha-L RNA-binding motif
CLD04_RS00020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00030	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS00030	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS00030	SSF56719	Type II DNA topoisomerase
CLD04_RS00035	SSF101904	GyrA/ParC C-terminal domain-like
CLD04_RS00035	SSF56719	Type II DNA topoisomerase
CLD04_RS00070	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CLD04_RS00070	SSF54631	CBS-domain pair
CLD04_RS00075	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS00075	SSF69189	Penicillin-binding protein associated domain
CLD04_RS00080	SSF51366	Ribulose-phoshate binding barrel
CLD04_RS00085	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS00095	SSF46589	tRNA-binding arm
CLD04_RS00095	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS00105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00115	SSF51445	(Trans)glycosidases
CLD04_RS00115	SSF54106	LysM domain
CLD04_RS00120	SSF52499	Isochorismatase-like hydrolases
CLD04_RS00125	SSF53927	Cytidine deaminase-like
CLD04_RS00135	SSF48019	post-AAA+ oligomerization domain-like
CLD04_RS00135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00140	SSF82607	YbaB-like
CLD04_RS00145	SSF111304	Recombination protein RecR
CLD04_RS00200	SSF53383	PLP-dependent transferases
CLD04_RS00200	SSF55904	Ornithine decarboxylase C-terminal domain
CLD04_RS00205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00210	SSF54913	GlnB-like
CLD04_RS00215	SSF158397	TM1646-like
CLD04_RS00220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00235	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS00240	SSF82771	GIY-YIG endonuclease
CLD04_RS00245	SSF53790	Tetrapyrrole methylase
CLD04_RS00250	SSF89447	AbrB/MazE/MraZ-like
CLD04_RS00255	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CLD04_RS00255	SSF50249	Nucleic acid-binding proteins
CLD04_RS00255	SSF52374	Nucleotidylyl transferase
CLD04_RS00260	SSF51556	Metallo-dependent hydrolases
CLD04_RS00265	SSF50685	Barwin-like endoglucanases
CLD04_RS00270	SSF110455	Toprim domain
CLD04_RS00275	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS00295	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS00295	SSF55060	GHMP Kinase, C-terminal domain
CLD04_RS00300	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS00300	SSF53271	PRTase-like
CLD04_RS00305	SSF55298	YjgF-like
CLD04_RS00310	SSF160537	SpoVG-like
CLD04_RS00315	SSF51161	Trimeric LpxA-like enzymes
CLD04_RS00315	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS00320	SSF53271	PRTase-like
CLD04_RS00325	SSF50715	Ribosomal protein L25-like
CLD04_RS00330	SSF53178	Peptidyl-tRNA hydrolase-like
CLD04_RS00340	SSF141259	CarD-like
CLD04_RS00340	SSF143517	TRCF domain-like
CLD04_RS00340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00345	SSF89447	AbrB/MazE/MraZ-like
CLD04_RS00355	SSF101386	all-alpha NTP pyrophosphatases
CLD04_RS00355	SSF53790	Tetrapyrrole methylase
CLD04_RS00360	SSF55174	Alpha-L RNA-binding motif
CLD04_RS00380	SSF50249	Nucleic acid-binding proteins
CLD04_RS00395	SSF81606	PP2C-like
CLD04_RS00400	SSF53300	vWA-like
CLD04_RS00405	SSF56112	Protein kinase-like (PK-like)
CLD04_RS00410	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS00410	SSF56037	PheT/TilS domain
CLD04_RS00410	SSF82829	MesJ substrate recognition domain-like
CLD04_RS00415	SSF53271	PRTase-like
CLD04_RS00420	SSF140990	FtsH protease domain-like
CLD04_RS00420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00425	SSF53067	Actin-like ATPase domain
CLD04_RS00430	SSF118352	HSP33 redox switch-like
CLD04_RS00430	SSF64397	Hsp33 domain
CLD04_RS00435	SSF109998	Triger factor/SurA peptide-binding domain-like
CLD04_RS00435	SSF54534	FKBP-like
CLD04_RS00440	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CLD04_RS00445	SSF56322	ADC synthase
CLD04_RS00450	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS00455	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
CLD04_RS00460	SSF51717	Dihydropteroate synthetase-like
CLD04_RS00465	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CLD04_RS00470	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
CLD04_RS00475	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS00480	SSF51395	FMN-linked oxidoreductases
CLD04_RS00485	SSF50249	Nucleic acid-binding proteins
CLD04_RS00485	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS00570	SSF46600	C-terminal UvrC-binding domain of UvrB
CLD04_RS00575	SSF55931	Glutamine synthetase/guanido kinase
CLD04_RS00580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00580	SSF81923	Double Clp-N motif
CLD04_RS00585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00585	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS00590	SSF143597	YojJ-like
CLD04_RS00590	SSF47781	RuvA domain 2-like
CLD04_RS00595	SSF88723	PIN domain-like
CLD04_RS00600	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS00605	SSF69765	IpsF-like
CLD04_RS00610	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
CLD04_RS00610	SSF52374	Nucleotidylyl transferase
CLD04_RS00620	SSF51161	Trimeric LpxA-like enzymes
CLD04_RS00625	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CLD04_RS00625	SSF52374	Nucleotidylyl transferase
CLD04_RS00630	SSF69065	RNase III domain-like
CLD04_RS00635	SSF55315	L30e-like
CLD04_RS00635	SSF75217	alpha/beta knot
CLD04_RS00645	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS00645	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS00650	SSF57829	Zn-binding ribosomal proteins
CLD04_RS00660	SSF50104	Translation proteins SH3-like domain
CLD04_RS00660	SSF82679	N-utilization substance G protein NusG, N-terminal domain
CLD04_RS00665	SSF46906	Ribosomal protein L11, C-terminal domain
CLD04_RS00665	SSF54747	Ribosomal L11/L12e N-terminal domain
CLD04_RS00670	SSF56808	Ribosomal protein L1
CLD04_RS00675	SSF160369	Ribosomal protein L10-like
CLD04_RS00680	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
CLD04_RS00680	SSF54736	ClpS-like
CLD04_RS00685	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS00690	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
CLD04_RS00695	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
CLD04_RS00700	SSF55315	L30e-like
CLD04_RS00705	SSF50249	Nucleic acid-binding proteins
CLD04_RS00710	SSF47973	Ribosomal protein S7
CLD04_RS00715	SSF50447	Translation proteins
CLD04_RS00715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00715	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS00715	SSF54980	EF-G C-terminal domain-like
CLD04_RS00720	SSF50447	Translation proteins
CLD04_RS00720	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
CLD04_RS00720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00725	SSF53474	alpha/beta-Hydrolases
CLD04_RS00730	SSF54999	Ribosomal protein S10
CLD04_RS00735	SSF50447	Translation proteins
CLD04_RS00740	SSF52166	Ribosomal protein L4
CLD04_RS00745	SSF54189	Ribosomal proteins S24e, L23 and L15e
CLD04_RS00750	SSF50104	Translation proteins SH3-like domain
CLD04_RS00750	SSF50249	Nucleic acid-binding proteins
CLD04_RS00755	SSF54570	Ribosomal protein S19
CLD04_RS00760	SSF54843	Ribosomal protein L22
CLD04_RS00765	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CLD04_RS00765	SSF54821	Ribosomal protein S3 C-terminal domain
CLD04_RS00770	SSF54686	Ribosomal protein L16p/L10e
CLD04_RS00775	SSF46561	Ribosomal protein L29 (L29p)
CLD04_RS00780	SSF50249	Nucleic acid-binding proteins
CLD04_RS00785	SSF50193	Ribosomal protein L14
CLD04_RS00790	SSF50104	Translation proteins SH3-like domain
CLD04_RS00795	SSF55282	RL5-like
CLD04_RS00800	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CLD04_RS00805	SSF56047	Ribosomal protein S8
CLD04_RS00810	SSF56053	Ribosomal protein L6
CLD04_RS00815	SSF53137	Translational machinery components
CLD04_RS00820	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS00820	SSF54768	dsRNA-binding domain-like
CLD04_RS00825	SSF55129	Ribosomal protein L30p/L7e
CLD04_RS00830	SSF52080	Ribosomal proteins L15p and L18e
CLD04_RS00835	SSF103491	Preprotein translocase SecY subunit
CLD04_RS00840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00845	SSF55920	Creatinase/aminopeptidase
CLD04_RS00855	SSF50249	Nucleic acid-binding proteins
CLD04_RS00860	SSF57840	Ribosomal protein L36
CLD04_RS00865	SSF46946	S13-like H2TH domain
CLD04_RS00870	SSF53137	Translational machinery components
CLD04_RS00875	SSF47789	C-terminal domain of RNA polymerase alpha subunit
CLD04_RS00875	SSF55257	RBP11-like subunits of RNA polymerase
CLD04_RS00875	SSF56553	Insert subdomain of RNA polymerase alpha subunit
CLD04_RS00880	SSF64263	Prokaryotic ribosomal protein L17
CLD04_RS00885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00900	SSF55120	Pseudouridine synthase
CLD04_RS00905	SSF52161	Ribosomal protein L13
CLD04_RS00910	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS00920	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS00930	SSF53187	Zn-dependent exopeptidases
CLD04_RS00935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS00950	SSF88713	Glycoside hydrolase/deacetylase
CLD04_RS00980	SSF56349	DNA breaking-rejoining enzymes
CLD04_RS00995	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS01000	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS01005	SSF46955	Putative DNA-binding domain
CLD04_RS01025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS01040	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS01055	SSF48024	N-terminal domain of DnaB helicase
CLD04_RS01055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS01065	SSF103084	Holliday junction resolvase RusA
CLD04_RS01095	SSF55811	Nudix
CLD04_RS01125	SSF110849	ParB/Sulfiredoxin
CLD04_RS01130	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS01140	SSF116960	YfbU-like
CLD04_RS01175	SSF56563	Major capsid protein gp5
CLD04_RS01180	SSF160059	PriA/YqbF domain
CLD04_RS01180	SSF68912	Rho N-terminal domain-like
CLD04_RS01185	SSF116915	Hypothetical protein YqbG
CLD04_RS01215	SSF69279	Phage tail proteins
CLD04_RS01230	SSF53955	Lysozyme-like
CLD04_RS01235	SSF54106	LysM domain
CLD04_RS01240	SSF69279	Phage tail proteins
CLD04_RS01250	SSF160719	gpW/gp25-like
CLD04_RS01270	SSF49842	TNF-like
CLD04_RS01275	SSF159865	XkdW-like
CLD04_RS01300	SSF47090	PGBD-like
CLD04_RS01300	SSF54106	LysM domain
CLD04_RS01300	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
CLD04_RS01305	SSF160631	SMI1/KNR4-like
CLD04_RS01320	SSF48452	TPR-like
CLD04_RS01335	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS01395	SSF52091	SpoIIaa-like
CLD04_RS01405	SSF53474	alpha/beta-Hydrolases
CLD04_RS01410	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS01415	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS01420	SSF53807	"Helical backbone" metal receptor
CLD04_RS01425	SSF46689	Homeodomain-like
CLD04_RS01425	SSF53807	"Helical backbone" metal receptor
CLD04_RS01435	SSF51445	(Trans)glycosidases
CLD04_RS01435	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
CLD04_RS01440	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS01445	SSF55604	Glucose permease domain IIB
CLD04_RS01450	SSF46689	Homeodomain-like
CLD04_RS01450	SSF53697	SIS domain
CLD04_RS01455	SSF53697	SIS domain
CLD04_RS01495	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS01495	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS01505	SSF143597	YojJ-like
CLD04_RS01515	SSF53738	Phosphoglucomutase, first 3 domains
CLD04_RS01515	SSF55957	Phosphoglucomutase, C-terminal domain
CLD04_RS01525	SSF53697	SIS domain
CLD04_RS01525	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CLD04_RS01535	SSF48150	DNA-glycosylase
CLD04_RS01535	SSF55945	TATA-box binding protein-like
CLD04_RS01545	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
CLD04_RS01545	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
CLD04_RS01560	SSF53056	beta-carbonic anhydrase, cab
CLD04_RS01575	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS01590	SSF56112	Protein kinase-like (PK-like)
CLD04_RS01620	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS01625	SSF48264	Cytochrome P450
CLD04_RS01640	SSF51695	PLC-like phosphodiesterases
CLD04_RS01645	SSF103473	MFS general substrate transporter
CLD04_RS01660	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS01660	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS01665	SSF103473	MFS general substrate transporter
CLD04_RS01675	SSF47090	PGBD-like
CLD04_RS01675	SSF51445	(Trans)glycosidases
CLD04_RS01680	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS01685	SSF46689	Homeodomain-like
CLD04_RS01685	SSF51215	Regulatory protein AraC
CLD04_RS01690	SSF51246	Rudiment single hybrid motif
CLD04_RS01690	SSF52440	PreATP-grasp domain
CLD04_RS01690	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS01695	SSF50494	Trypsin-like serine proteases
CLD04_RS01705	SSF53474	alpha/beta-Hydrolases
CLD04_RS01730	SSF159501	EreA/ChaN-like
CLD04_RS01735	SSF52821	Rhodanese/Cell cycle control phosphatase
CLD04_RS01740	SSF118215	Proton glutamate symport protein
CLD04_RS01745	SSF51261	Duplicated hybrid motif
CLD04_RS01745	SSF55604	Glucose permease domain IIB
CLD04_RS01750	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS01755	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS01755	SSF64288	Chorismate lyase-like
CLD04_RS01765	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
CLD04_RS01775	SSF82282	Homocysteine S-methyltransferase
CLD04_RS01790	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS01795	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS01800	SSF52172	CheY-like
CLD04_RS01805	SSF51569	Aldolase
CLD04_RS01810	SSF53720	ALDH-like
CLD04_RS01820	SSF51604	Enolase C-terminal domain-like
CLD04_RS01820	SSF54826	Enolase N-terminal domain-like
CLD04_RS01825	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS01825	SSF48008	GntR ligand-binding domain-like
CLD04_RS01840	SSF57938	DnaJ/Hsp40 cysteine-rich domain
CLD04_RS01845	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS01850	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS01850	SSF52172	CheY-like
CLD04_RS01855	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS01855	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS01860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS01880	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS01885	SSF56037	PheT/TilS domain
CLD04_RS01890	SSF54909	Dimeric alpha+beta barrel
CLD04_RS01895	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS01900	SSF50475	FMN-binding split barrel
CLD04_RS01905	SSF160904	Jann2411-like
CLD04_RS01910	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS01910	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS01925	SSF48613	Heme oxygenase-like
CLD04_RS01930	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS01930	SSF69864	Argininosuccinate synthetase, C-terminal domain
CLD04_RS01935	SSF53383	PLP-dependent transferases
CLD04_RS01945	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS01945	SSF53383	PLP-dependent transferases
CLD04_RS01960	SSF56300	Metallo-dependent phosphatases
CLD04_RS01975	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
CLD04_RS01980	SSF53383	PLP-dependent transferases
CLD04_RS01985	SSF103473	MFS general substrate transporter
CLD04_RS01990	SSF46689	Homeodomain-like
CLD04_RS01990	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS01995	SSF53774	Glutaminase/Asparaginase
CLD04_RS02000	SSF53474	alpha/beta-Hydrolases
CLD04_RS02010	SSF103642	Sec-C motif
CLD04_RS02010	SSF47954	Cyclin-like
CLD04_RS02020	SSF52172	CheY-like
CLD04_RS02025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS02035	SSF51430	NAD(P)-linked oxidoreductase
CLD04_RS02055	SSF55166	Hedgehog/DD-peptidase
CLD04_RS02060	SSF48452	TPR-like
CLD04_RS02065	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS02070	SSF51011	Glycosyl hydrolase domain
CLD04_RS02070	SSF51445	(Trans)glycosidases
CLD04_RS02075	SSF53807	"Helical backbone" metal receptor
CLD04_RS02080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS02085	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS02090	SSF51679	Bacterial luciferase-like
CLD04_RS02125	SSF103473	MFS general substrate transporter
CLD04_RS02130	SSF103473	MFS general substrate transporter
CLD04_RS02135	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS02140	SSF54631	CBS-domain pair
CLD04_RS02145	SSF161098	MetI-like
CLD04_RS02150	SSF53850	Periplasmic binding protein-like II
CLD04_RS02155	SSF53187	Zn-dependent exopeptidases
CLD04_RS02155	SSF55031	Bacterial exopeptidase dimerisation domain
CLD04_RS02175	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS02175	SSF56327	LDH C-terminal domain-like
CLD04_RS02205	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS02210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS02215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS02220	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS02225	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02225	SSF53850	Periplasmic binding protein-like II
CLD04_RS02230	SSF53474	alpha/beta-Hydrolases
CLD04_RS02240	SSF51730	FAD-linked oxidoreductase
CLD04_RS02245	SSF53720	ALDH-like
CLD04_RS02270	SSF53474	alpha/beta-Hydrolases
CLD04_RS02275	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS02280	SSF53790	Tetrapyrrole methylase
CLD04_RS02280	SSF69618	HemD-like
CLD04_RS02285	SSF50022	ISP domain
CLD04_RS02290	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS02290	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
CLD04_RS02290	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CLD04_RS02295	SSF50692	ADC-like
CLD04_RS02295	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CLD04_RS02300	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS02300	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
CLD04_RS02300	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CLD04_RS02305	SSF103473	MFS general substrate transporter
CLD04_RS02315	SSF141523	L,D-transpeptidase catalytic domain-like
CLD04_RS02330	SSF161098	MetI-like
CLD04_RS02335	SSF53850	Periplasmic binding protein-like II
CLD04_RS02350	SSF51445	(Trans)glycosidases
CLD04_RS02365	SSF103190	Sensory domain-like
CLD04_RS02365	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS02370	SSF53697	SIS domain
CLD04_RS02375	SSF51366	Ribulose-phoshate binding barrel
CLD04_RS02380	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02385	SSF47336	ACP-like
CLD04_RS02385	SSF52777	CoA-dependent acyltransferases
CLD04_RS02385	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS02390	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS02395	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS02405	SSF47336	ACP-like
CLD04_RS02405	SSF52777	CoA-dependent acyltransferases
CLD04_RS02405	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS02410	SSF47336	ACP-like
CLD04_RS02410	SSF52777	CoA-dependent acyltransferases
CLD04_RS02410	SSF53474	alpha/beta-Hydrolases
CLD04_RS02410	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS02415	SSF53474	alpha/beta-Hydrolases
CLD04_RS02420	SSF103473	MFS general substrate transporter
CLD04_RS02430	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS02435	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02435	SSF53383	PLP-dependent transferases
CLD04_RS02440	SSF56214	4'-phosphopantetheinyl transferase
CLD04_RS02450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS02455	SSF161098	MetI-like
CLD04_RS02460	SSF53850	Periplasmic binding protein-like II
CLD04_RS02465	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02465	SSF53850	Periplasmic binding protein-like II
CLD04_RS02470	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
CLD04_RS02475	SSF143968	UbiD C-terminal domain-like
CLD04_RS02475	SSF50475	FMN-binding split barrel
CLD04_RS02490	SSF53474	alpha/beta-Hydrolases
CLD04_RS02495	SSF103473	MFS general substrate transporter
CLD04_RS02500	SSF51126	Pectin lyase-like
CLD04_RS02525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS02535	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS02535	SSF52172	CheY-like
CLD04_RS02540	SSF158472	HAMP domain-like
CLD04_RS02540	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS02540	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS02545	SSF48452	TPR-like
CLD04_RS02565	SSF53633	Carbamate kinase-like
CLD04_RS02565	SSF55021	ACT-like
CLD04_RS02570	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS02575	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS02580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS02585	SSF53807	"Helical backbone" metal receptor
CLD04_RS02590	SSF103473	MFS general substrate transporter
CLD04_RS02595	SSF46689	Homeodomain-like
CLD04_RS02600	SSF55469	FMN-dependent nitroreductase-like
CLD04_RS02605	SSF54909	Dimeric alpha+beta barrel
CLD04_RS02610	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02615	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02615	SSF53383	PLP-dependent transferases
CLD04_RS02620	SSF53383	PLP-dependent transferases
CLD04_RS02625	SSF53720	ALDH-like
CLD04_RS02630	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS02635	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS02645	SSF81296	E set domains
CLD04_RS02650	SSF160387	NosL/MerB-like
CLD04_RS02650	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02660	SSF52794	PTS system IIB component-like
CLD04_RS02665	SSF55804	Phoshotransferase/anion transport protein
CLD04_RS02670	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS02670	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS02675	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CLD04_RS02680	SSF51306	LexA/Signal peptidase
CLD04_RS02685	SSF53474	alpha/beta-Hydrolases
CLD04_RS02690	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CLD04_RS02700	SSF56784	HAD-like
CLD04_RS02705	SSF88713	Glycoside hydrolase/deacetylase
CLD04_RS02715	SSF160920	PSTPO5379-like
CLD04_RS02720	SSF160467	PH0987 N-terminal domain-like
CLD04_RS02720	SSF50891	Cyclophilin-like
CLD04_RS02725	SSF50891	Cyclophilin-like
CLD04_RS02730	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02730	SSF55781	GAF domain-like
CLD04_RS02735	SSF52266	SGNH hydrolase
CLD04_RS02745	SSF54909	Dimeric alpha+beta barrel
CLD04_RS02750	SSF54427	NTF2-like
CLD04_RS02750	SSF56519	Penicillin binding protein dimerisation domain
CLD04_RS02750	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS02755	SSF51430	NAD(P)-linked oxidoreductase
CLD04_RS02760	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02760	SSF52794	PTS system IIB component-like
CLD04_RS02760	SSF55804	Phoshotransferase/anion transport protein
CLD04_RS02760	SSF63520	PTS-regulatory domain, PRD
CLD04_RS02765	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS02770	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS02775	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS02780	SSF51182	RmlC-like cupins
CLD04_RS02785	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS02790	SSF50475	FMN-binding split barrel
CLD04_RS02805	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02805	SSF54909	Dimeric alpha+beta barrel
CLD04_RS02810	SSF56712	Prokaryotic type I DNA topoisomerase
CLD04_RS02815	SSF48208	Six-hairpin glycosidases
CLD04_RS02830	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS02870	SSF51182	RmlC-like cupins
CLD04_RS02875	SSF54909	Dimeric alpha+beta barrel
CLD04_RS02880	SSF47240	Ferritin-like
CLD04_RS02890	SSF103190	Sensory domain-like
CLD04_RS02890	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS02890	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS02890	SSF55890	Sporulation response regulatory protein Spo0B
CLD04_RS02895	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS02895	SSF52172	CheY-like
CLD04_RS02900	SSF118215	Proton glutamate symport protein
CLD04_RS02910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS02925	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CLD04_RS02925	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CLD04_RS02940	SSF160240	Cation efflux protein cytoplasmic domain-like
CLD04_RS02940	SSF161111	Cation efflux protein transmembrane domain-like
CLD04_RS02945	SSF52833	Thioredoxin-like
CLD04_RS02950	SSF52440	PreATP-grasp domain
CLD04_RS02950	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS02955	SSF53244	MurD-like peptide ligases, peptide-binding domain
CLD04_RS02955	SSF53623	MurD-like peptide ligases, catalytic domain
CLD04_RS02955	SSF63418	MurE/MurF N-terminal domain
CLD04_RS02965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS02980	SSF144091	Rhomboid-like
CLD04_RS02985	SSF56214	4'-phosphopantetheinyl transferase
CLD04_RS02990	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
CLD04_RS02995	SSF50621	Alanine racemase C-terminal domain-like
CLD04_RS02995	SSF51419	PLP-binding barrel
CLD04_RS03000	SSF47598	Ribbon-helix-helix
CLD04_RS03005	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
CLD04_RS03010	SSF52091	SpoIIaa-like
CLD04_RS03015	SSF52091	SpoIIaa-like
CLD04_RS03020	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS03025	SSF101215	KaiA/RbsU domain
CLD04_RS03025	SSF81606	PP2C-like
CLD04_RS03030	SSF52091	SpoIIaa-like
CLD04_RS03035	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS03040	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS03040	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS03045	SSF81606	PP2C-like
CLD04_RS03050	SSF158832	Tex N-terminal region-like
CLD04_RS03050	SSF47781	RuvA domain 2-like
CLD04_RS03050	SSF50249	Nucleic acid-binding proteins
CLD04_RS03050	SSF53098	Ribonuclease H-like
CLD04_RS03100	SSF56349	DNA breaking-rejoining enzymes
CLD04_RS03110	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS03135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS03190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS03195	SSF143602	STIV B116-like
CLD04_RS03205	SSF53955	Lysozyme-like
CLD04_RS03205	SSF54001	Cysteine proteinases
CLD04_RS03225	SSF48452	TPR-like
CLD04_RS03245	SSF160631	SMI1/KNR4-like
CLD04_RS03255	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS03270	SSF50249	Nucleic acid-binding proteins
CLD04_RS03275	SSF141259	CarD-like
CLD04_RS03285	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS03290	SSF46689	Homeodomain-like
CLD04_RS03290	SSF51215	Regulatory protein AraC
CLD04_RS03295	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS03300	SSF46689	Homeodomain-like
CLD04_RS03300	SSF55136	Probable bacterial effector-binding domain
CLD04_RS03305	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03305	SSF53383	PLP-dependent transferases
CLD04_RS03310	SSF103473	MFS general substrate transporter
CLD04_RS03315	SSF159888	YdhG-like
CLD04_RS03330	SSF55594	HPr-like
CLD04_RS03335	SSF46689	Homeodomain-like
CLD04_RS03340	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS03345	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03345	SSF53383	PLP-dependent transferases
CLD04_RS03350	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CLD04_RS03355	SSF53474	alpha/beta-Hydrolases
CLD04_RS03360	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03370	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03380	SSF52788	Phosphotyrosine protein phosphatases I
CLD04_RS03385	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS03390	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS03395	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03395	SSF53383	PLP-dependent transferases
CLD04_RS03400	SSF50475	FMN-binding split barrel
CLD04_RS03405	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03410	SSF69118	AhpD-like
CLD04_RS03425	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS03430	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS03430	SSF52172	CheY-like
CLD04_RS03440	SSF53474	alpha/beta-Hydrolases
CLD04_RS03450	SSF46955	Putative DNA-binding domain
CLD04_RS03450	SSF55136	Probable bacterial effector-binding domain
CLD04_RS03470	SSF160240	Cation efflux protein cytoplasmic domain-like
CLD04_RS03470	SSF161111	Cation efflux protein transmembrane domain-like
CLD04_RS03475	SSF55469	FMN-dependent nitroreductase-like
CLD04_RS03480	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS03490	SSF52833	Thioredoxin-like
CLD04_RS03515	SSF49764	HSP20-like chaperones
CLD04_RS03530	SSF46689	Homeodomain-like
CLD04_RS03530	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS03540	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS03560	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03565	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CLD04_RS03570	SSF55469	FMN-dependent nitroreductase-like
CLD04_RS03575	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03580	SSF103473	MFS general substrate transporter
CLD04_RS03590	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03590	SSF48008	GntR ligand-binding domain-like
CLD04_RS03595	SSF51445	(Trans)glycosidases
CLD04_RS03595	SSF54106	LysM domain
CLD04_RS03600	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS03610	SSF53649	Alkaline phosphatase-like
CLD04_RS03615	SSF159888	YdhG-like
CLD04_RS03625	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS03630	SSF109604	HD-domain/PDEase-like
CLD04_RS03640	SSF103473	MFS general substrate transporter
CLD04_RS03645	SSF52794	PTS system IIB component-like
CLD04_RS03650	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
CLD04_RS03660	SSF51445	(Trans)glycosidases
CLD04_RS03665	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03665	SSF64288	Chorismate lyase-like
CLD04_RS03670	SSF53067	Actin-like ATPase domain
CLD04_RS03675	SSF51182	RmlC-like cupins
CLD04_RS03680	SSF51445	(Trans)glycosidases
CLD04_RS03725	SSF55326	PurM N-terminal domain-like
CLD04_RS03725	SSF56042	PurM C-terminal domain-like
CLD04_RS03730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS03735	SSF53067	Actin-like ATPase domain
CLD04_RS03740	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS03745	SSF53067	Actin-like ATPase domain
CLD04_RS03750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS03755	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
CLD04_RS03760	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS03760	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS03790	SSF50129	GroES-like
CLD04_RS03795	SSF48592	GroEL equatorial domain-like
CLD04_RS03795	SSF52029	GroEL apical domain-like
CLD04_RS03795	SSF54849	GroEL-intermediate domain like
CLD04_RS03800	SSF47090	PGBD-like
CLD04_RS03800	SSF51445	(Trans)glycosidases
CLD04_RS03815	SSF48452	TPR-like
CLD04_RS03815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS03820	SSF50129	GroES-like
CLD04_RS03820	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS03825	SSF103473	MFS general substrate transporter
CLD04_RS03830	SSF53613	Ribokinase-like
CLD04_RS03850	SSF117892	Band 7/SPFH domain
CLD04_RS03860	SSF103473	MFS general substrate transporter
CLD04_RS03865	SSF50129	GroES-like
CLD04_RS03865	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS03875	SSF69304	Tricorn protease N-terminal domain
CLD04_RS03890	SSF53474	alpha/beta-Hydrolases
CLD04_RS03900	SSF49503	Cupredoxins
CLD04_RS03915	SSF160240	Cation efflux protein cytoplasmic domain-like
CLD04_RS03915	SSF161111	Cation efflux protein transmembrane domain-like
CLD04_RS03920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS03930	SSF54001	Cysteine proteinases
CLD04_RS03935	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS03935	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS03935	SSF54810	GMP synthetase C-terminal dimerisation domain
CLD04_RS03970	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
CLD04_RS03975	SSF51246	Rudiment single hybrid motif
CLD04_RS03975	SSF52440	PreATP-grasp domain
CLD04_RS03975	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS03980	SSF48557	L-aspartase-like
CLD04_RS03985	SSF56104	SAICAR synthase-like
CLD04_RS03990	SSF82697	PurS-like
CLD04_RS03995	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS04000	SSF55326	PurM N-terminal domain-like
CLD04_RS04000	SSF56042	PurM C-terminal domain-like
CLD04_RS04005	SSF53271	PRTase-like
CLD04_RS04005	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CLD04_RS04010	SSF55326	PurM N-terminal domain-like
CLD04_RS04010	SSF56042	PurM C-terminal domain-like
CLD04_RS04015	SSF53328	Formyltransferase
CLD04_RS04020	SSF52335	Methylglyoxal synthase-like
CLD04_RS04020	SSF53927	Cytidine deaminase-like
CLD04_RS04025	SSF51246	Rudiment single hybrid motif
CLD04_RS04025	SSF52440	PreATP-grasp domain
CLD04_RS04025	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS04030	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS04030	SSF54909	Dimeric alpha+beta barrel
CLD04_RS04045	SSF51338	Composite domain of metallo-dependent hydrolases
CLD04_RS04045	SSF51556	Metallo-dependent hydrolases
CLD04_RS04050	SSF159774	YerB-like
CLD04_RS04055	SSF48295	TrpR-like
CLD04_RS04060	SSF51395	FMN-linked oxidoreductases
CLD04_RS04065	SSF51395	FMN-linked oxidoreductases
CLD04_RS04070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS04075	SSF47781	RuvA domain 2-like
CLD04_RS04075	SSF50249	Nucleic acid-binding proteins
CLD04_RS04075	SSF52113	BRCT domain
CLD04_RS04075	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
CLD04_RS04090	SSF56112	Protein kinase-like (PK-like)
CLD04_RS04105	SSF141000	Glu-tRNAGln amidotransferase C subunit
CLD04_RS04110	SSF75304	Amidase signature (AS) enzymes
CLD04_RS04115	SSF55931	Glutamine synthetase/guanido kinase
CLD04_RS04115	SSF89095	GatB/YqeY motif
CLD04_RS04125	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CLD04_RS04125	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CLD04_RS04125	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CLD04_RS04130	SSF111331	NAD kinase/diacylglycerol kinase-like
CLD04_RS04135	SSF50249	Nucleic acid-binding proteins
CLD04_RS04135	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS04145	SSF46689	Homeodomain-like
CLD04_RS04145	SSF53041	Resolvase-like
CLD04_RS04150	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS04155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS04170	SSF47345	Colicin E immunity proteins
CLD04_RS04175	SSF160424	BH3703-like
CLD04_RS04190	SSF48452	TPR-like
CLD04_RS04200	SSF75625	YebC-like
CLD04_RS04210	SSF46689	Homeodomain-like
CLD04_RS04210	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS04215	SSF54427	NTF2-like
CLD04_RS04235	SSF47240	Ferritin-like
CLD04_RS04240	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS04255	SSF46689	Homeodomain-like
CLD04_RS04255	SSF52172	CheY-like
CLD04_RS04255	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS04260	SSF53850	Periplasmic binding protein-like II
CLD04_RS04265	SSF161098	MetI-like
CLD04_RS04270	SSF161098	MetI-like
CLD04_RS04275	SSF48208	Six-hairpin glycosidases
CLD04_RS04280	SSF46689	Homeodomain-like
CLD04_RS04285	SSF52266	SGNH hydrolase
CLD04_RS04290	SSF49899	Concanavalin A-like lectins/glucanases
CLD04_RS04305	SSF69318	Integrin alpha N-terminal domain
CLD04_RS04310	SSF52266	SGNH hydrolase
CLD04_RS04325	SSF53850	Periplasmic binding protein-like II
CLD04_RS04330	SSF161098	MetI-like
CLD04_RS04335	SSF161098	MetI-like
CLD04_RS04340	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS04340	SSF56327	LDH C-terminal domain-like
CLD04_RS04350	SSF54909	Dimeric alpha+beta barrel
CLD04_RS04355	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS04365	SSF52091	SpoIIaa-like
CLD04_RS04385	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS04390	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS04400	SSF48264	Cytochrome P450
CLD04_RS04400	SSF52218	Flavoproteins
CLD04_RS04400	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CLD04_RS04400	SSF63380	Riboflavin synthase domain-like
CLD04_RS04405	SSF53649	Alkaline phosphatase-like
CLD04_RS04410	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS04415	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS04420	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS04425	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS04430	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS04435	SSF103473	MFS general substrate transporter
CLD04_RS04440	SSF56784	HAD-like
CLD04_RS04450	SSF53720	ALDH-like
CLD04_RS04455	SSF103190	Sensory domain-like
CLD04_RS04455	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS04460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS04470	SSF46955	Putative DNA-binding domain
CLD04_RS04475	SSF103473	MFS general substrate transporter
CLD04_RS04490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS04495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS04500	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS04505	SSF50129	GroES-like
CLD04_RS04505	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS04510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS04515	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS04520	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS04525	SSF53807	"Helical backbone" metal receptor
CLD04_RS04530	SSF140688	YfmB-like
CLD04_RS04545	SSF51126	Pectin lyase-like
CLD04_RS04555	SSF103190	Sensory domain-like
CLD04_RS04555	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS04555	SSF55890	Sporulation response regulatory protein Spo0B
CLD04_RS04560	SSF52172	CheY-like
CLD04_RS04565	SSF53850	Periplasmic binding protein-like II
CLD04_RS04575	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS04580	SSF56512	Nitric oxide (NO) synthase oxygenase domain
CLD04_RS04585	SSF54975	Acylphosphatase/BLUF domain-like
CLD04_RS04590	SSF50800	PK beta-barrel domain-like
CLD04_RS04610	SSF55920	Creatinase/aminopeptidase
CLD04_RS04615	SSF55604	Glucose permease domain IIB
CLD04_RS04620	SSF53649	Alkaline phosphatase-like
CLD04_RS04645	SSF55604	Glucose permease domain IIB
CLD04_RS04650	SSF51011	Glycosyl hydrolase domain
CLD04_RS04650	SSF51445	(Trans)glycosidases
CLD04_RS04655	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS04655	SSF64288	Chorismate lyase-like
CLD04_RS04660	SSF55469	FMN-dependent nitroreductase-like
CLD04_RS04665	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
CLD04_RS04665	SSF56300	Metallo-dependent phosphatases
CLD04_RS04670	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS04675	SSF103473	MFS general substrate transporter
CLD04_RS04685	SSF52788	Phosphotyrosine protein phosphatases I
CLD04_RS04700	SSF103473	MFS general substrate transporter
CLD04_RS04715	SSF50182	Sm-like ribonucleoproteins
CLD04_RS04715	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
CLD04_RS04720	SSF102114	Radical SAM enzymes
CLD04_RS04730	SSF88713	Glycoside hydrolase/deacetylase
CLD04_RS04740	SSF143865	CorA soluble domain-like
CLD04_RS04740	SSF144083	Magnesium transport protein CorA, transmembrane region
CLD04_RS04745	SSF48150	DNA-glycosylase
CLD04_RS04750	SSF50249	Nucleic acid-binding proteins
CLD04_RS04750	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS04760	SSF51395	FMN-linked oxidoreductases
CLD04_RS04775	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS04780	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS04780	SSF52922	TK C-terminal domain-like
CLD04_RS04785	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
CLD04_RS04785	SSF51230	Single hybrid motif
CLD04_RS04785	SSF52777	CoA-dependent acyltransferases
CLD04_RS04790	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS04790	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CLD04_RS04795	SSF46689	Homeodomain-like
CLD04_RS04795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS04795	SSF55781	GAF domain-like
CLD04_RS04805	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS04825	SSF140453	EsxAB dimer-like
CLD04_RS04830	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS04830	SSF56327	LDH C-terminal domain-like
CLD04_RS04835	SSF46689	Homeodomain-like
CLD04_RS04835	SSF53697	SIS domain
CLD04_RS04840	SSF55604	Glucose permease domain IIB
CLD04_RS04845	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS04845	SSF90123	ABC transporter transmembrane region
CLD04_RS04850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS04850	SSF90123	ABC transporter transmembrane region
CLD04_RS04860	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS04865	SSF46689	Homeodomain-like
CLD04_RS04865	SSF51215	Regulatory protein AraC
CLD04_RS04870	SSF103473	MFS general substrate transporter
CLD04_RS04875	SSF51658	Xylose isomerase-like
CLD04_RS04880	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS04880	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS04885	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS04890	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS04890	SSF52172	CheY-like
CLD04_RS04900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS04915	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS04920	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS04925	SSF53474	alpha/beta-Hydrolases
CLD04_RS04935	SSF109854	DinB/YfiT-like putative metalloenzymes
CLD04_RS04940	SSF103473	MFS general substrate transporter
CLD04_RS04945	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS04950	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS04955	SSF53807	"Helical backbone" metal receptor
CLD04_RS04960	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS04965	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS04970	SSF54506	Diaminopimelate epimerase-like
CLD04_RS04975	SSF55469	FMN-dependent nitroreductase-like
CLD04_RS04990	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS05000	SSF101697	Hypothetical protein YfhH
CLD04_RS05005	SSF103473	MFS general substrate transporter
CLD04_RS05035	SSF53474	alpha/beta-Hydrolases
CLD04_RS05040	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS05055	SSF48150	DNA-glycosylase
CLD04_RS05055	SSF55811	Nudix
CLD04_RS05065	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS05080	SSF159234	FomD-like
CLD04_RS05085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS05085	SSF90123	ABC transporter transmembrane region
CLD04_RS05095	SSF53383	PLP-dependent transferases
CLD04_RS05100	SSF52833	Thioredoxin-like
CLD04_RS05105	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS05220	SSF81296	E set domains
CLD04_RS05235	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS05245	SSF56176	FAD-binding/transporter-associated domain-like
CLD04_RS05255	SSF56634	Heme-dependent catalase-like
CLD04_RS05260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS05265	SSF53850	Periplasmic binding protein-like II
CLD04_RS05270	SSF161098	MetI-like
CLD04_RS05275	SSF51679	Bacterial luciferase-like
CLD04_RS05285	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CLD04_RS05295	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS05305	SSF56037	PheT/TilS domain
CLD04_RS05310	SSF48371	ARM repeat
CLD04_RS05310	SSF54862	4Fe-4S ferredoxins
CLD04_RS05320	SSF75217	alpha/beta knot
CLD04_RS05340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS05350	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS05355	SSF51230	Single hybrid motif
CLD04_RS05360	SSF103473	MFS general substrate transporter
CLD04_RS05365	SSF52218	Flavoproteins
CLD04_RS05385	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS05390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS05395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS05405	SSF50249	Nucleic acid-binding proteins
CLD04_RS05415	SSF53850	Periplasmic binding protein-like II
CLD04_RS05420	SSF55073	Nucleotide cyclase
CLD04_RS05425	SSF118215	Proton glutamate symport protein
CLD04_RS05450	SSF50199	Staphylococcal nuclease
CLD04_RS05450	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
CLD04_RS05450	SSF56300	Metallo-dependent phosphatases
CLD04_RS05455	SSF63817	Sortase
CLD04_RS05460	SSF55120	Pseudouridine synthase
CLD04_RS05470	SSF54631	CBS-domain pair
CLD04_RS05475	SSF56784	HAD-like
CLD04_RS05480	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS05480	SSF56317	Carbon-nitrogen hydrolase
CLD04_RS05485	SSF53383	PLP-dependent transferases
CLD04_RS05490	SSF110391	GlpP-like
CLD04_RS05495	SSF81338	Aquaporin-like
CLD04_RS05500	SSF53067	Actin-like ATPase domain
CLD04_RS05505	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS05505	SSF54373	FAD-linked reductases, C-terminal domain
CLD04_RS05510	SSF53738	Phosphoglucomutase, first 3 domains
CLD04_RS05510	SSF55957	Phosphoglucomutase, C-terminal domain
CLD04_RS05515	SSF55781	GAF domain-like
CLD04_RS05515	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS05520	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS05520	SSF52172	CheY-like
CLD04_RS05525	SSF52218	Flavoproteins
CLD04_RS05540	SSF54001	Cysteine proteinases
CLD04_RS05540	SSF54106	LysM domain
CLD04_RS05545	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS05560	SSF53649	Alkaline phosphatase-like
CLD04_RS05565	SSF54001	Cysteine proteinases
CLD04_RS05565	SSF54106	LysM domain
CLD04_RS05570	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS05570	SSF53850	Periplasmic binding protein-like II
CLD04_RS05575	SSF48256	Citrate synthase
CLD04_RS05580	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS05590	SSF161070	SNF-like
CLD04_RS05595	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS05595	SSF53383	PLP-dependent transferases
CLD04_RS05600	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS05615	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS05615	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS05620	SSF51430	NAD(P)-linked oxidoreductase
CLD04_RS05625	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CLD04_RS05635	SSF54631	CBS-domain pair
CLD04_RS05635	SSF56176	FAD-binding/transporter-associated domain-like
CLD04_RS05640	SSF46955	Putative DNA-binding domain
CLD04_RS05645	SSF53383	PLP-dependent transferases
CLD04_RS05650	SSF54631	CBS-domain pair
CLD04_RS05650	SSF56176	FAD-binding/transporter-associated domain-like
CLD04_RS05665	SSF51695	PLC-like phosphodiesterases
CLD04_RS05675	SSF50182	Sm-like ribonucleoproteins
CLD04_RS05675	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
CLD04_RS05675	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
CLD04_RS05680	SSF52467	DHS-like NAD/FAD-binding domain
CLD04_RS05685	SSF88713	Glycoside hydrolase/deacetylase
CLD04_RS05690	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
CLD04_RS05700	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS05710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS05710	SSF90123	ABC transporter transmembrane region
CLD04_RS05715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS05715	SSF90123	ABC transporter transmembrane region
CLD04_RS05720	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS05740	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS05745	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS05755	SSF158622	YheA/YmcA-like
CLD04_RS05765	SSF56784	HAD-like
CLD04_RS05770	SSF102114	Radical SAM enzymes
CLD04_RS05780	SSF116726	TrkA C-terminal domain-like
CLD04_RS05790	SSF52096	ClpP/crotonase
CLD04_RS05800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS05810	SSF56300	Metallo-dependent phosphatases
CLD04_RS05815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS05820	SSF109604	HD-domain/PDEase-like
CLD04_RS05820	SSF50249	Nucleic acid-binding proteins
CLD04_RS05830	SSF109998	Triger factor/SurA peptide-binding domain-like
CLD04_RS05830	SSF54534	FKBP-like
CLD04_RS05855	SSF109915	Hypothetical protein YhaI
CLD04_RS05860	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS05865	SSF55194	Ribosome recycling factor, RRF
CLD04_RS05880	SSF53383	PLP-dependent transferases
CLD04_RS05885	SSF54197	HIT-like
CLD04_RS05890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS05905	SSF53187	Zn-dependent exopeptidases
CLD04_RS05905	SSF55031	Bacterial exopeptidase dimerisation domain
CLD04_RS05920	SSF54909	Dimeric alpha+beta barrel
CLD04_RS05925	SSF53955	Lysozyme-like
CLD04_RS05925	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS05930	SSF51726	UROD/MetE-like
CLD04_RS05935	SSF53800	Chelatase
CLD04_RS05940	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS05940	SSF54373	FAD-linked reductases, C-terminal domain
CLD04_RS05945	SSF46689	Homeodomain-like
CLD04_RS05945	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS05950	SSF57997	Tropomyosin
CLD04_RS05955	SSF53901	Thiolase-like
CLD04_RS05970	SSF101821	Aminopeptidase/glucanase lid domain
CLD04_RS05970	SSF53187	Zn-dependent exopeptidases
CLD04_RS05975	SSF88697	PUA domain-like
CLD04_RS05980	SSF118215	Proton glutamate symport protein
CLD04_RS05990	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS05995	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS05995	SSF82649	SufE/NifU
CLD04_RS06000	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS06005	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS06020	SSF52743	Subtilisin-like
CLD04_RS06020	SSF54897	Protease propeptides/inhibitors
CLD04_RS06025	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS06030	SSF50129	GroES-like
CLD04_RS06030	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS06035	SSF53807	"Helical backbone" metal receptor
CLD04_RS06040	SSF53254	Phosphoglycerate mutase-like
CLD04_RS06045	SSF53901	Thiolase-like
CLD04_RS06050	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS06060	SSF46458	Globin-like
CLD04_RS06060	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS06070	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS06085	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS06115	SSF51306	LexA/Signal peptidase
CLD04_RS06120	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS06125	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS06130	SSF103473	MFS general substrate transporter
CLD04_RS06140	SSF56784	HAD-like
CLD04_RS06150	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS06150	SSF53822	Periplasmic binding protein-like I
CLD04_RS06160	SSF103473	MFS general substrate transporter
CLD04_RS06165	SSF53850	Periplasmic binding protein-like II
CLD04_RS06175	SSF47240	Ferritin-like
CLD04_RS06180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS06185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS06185	SSF52980	Restriction endonuclease-like
CLD04_RS06190	SSF56300	Metallo-dependent phosphatases
CLD04_RS06195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS06235	SSF140500	BAS1536-like
CLD04_RS06245	SSF56529	FAH
CLD04_RS06255	SSF52743	Subtilisin-like
CLD04_RS06265	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS06265	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CLD04_RS06270	SSF109854	DinB/YfiT-like putative metalloenzymes
CLD04_RS06275	SSF48576	Terpenoid synthases
CLD04_RS06285	SSF46689	Homeodomain-like
CLD04_RS06285	SSF51215	Regulatory protein AraC
CLD04_RS06290	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS06290	SSF53822	Periplasmic binding protein-like I
CLD04_RS06295	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS06295	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS06300	SSF109854	DinB/YfiT-like putative metalloenzymes
CLD04_RS06310	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS06310	SSF53383	PLP-dependent transferases
CLD04_RS06315	SSF141571	Pentapeptide repeat-like
CLD04_RS06320	SSF53474	alpha/beta-Hydrolases
CLD04_RS06325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS06340	SSF142823	ComB-like
CLD04_RS06345	SSF102110	(2r)-phospho-3-sulfolactate synthase ComA
CLD04_RS06355	SSF51604	Enolase C-terminal domain-like
CLD04_RS06355	SSF54826	Enolase N-terminal domain-like
CLD04_RS06445	SSF103473	MFS general substrate transporter
CLD04_RS06450	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS06455	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS06460	SSF51730	FAD-linked oxidoreductase
CLD04_RS06460	SSF82282	Homocysteine S-methyltransferase
CLD04_RS06465	SSF89963	YajQ-like
CLD04_RS06470	SSF50249	Nucleic acid-binding proteins
CLD04_RS06490	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS06505	SSF55486	Metalloproteases ("zincins"), catalytic domain
CLD04_RS06510	SSF82549	DAK1/DegV-like
CLD04_RS06530	SSF56784	HAD-like
CLD04_RS06535	SSF53474	alpha/beta-Hydrolases
CLD04_RS06540	SSF117916	Fe-S cluster assembly (FSCA) domain-like
CLD04_RS06550	SSF55103	FAD-linked oxidases, C-terminal domain
CLD04_RS06550	SSF56176	FAD-binding/transporter-associated domain-like
CLD04_RS06555	SSF103473	MFS general substrate transporter
CLD04_RS06560	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS06560	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS06565	SSF56266	DmpA/ArgJ-like
CLD04_RS06570	SSF53633	Carbamate kinase-like
CLD04_RS06575	SSF53383	PLP-dependent transferases
CLD04_RS06580	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
CLD04_RS06580	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS06585	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
CLD04_RS06585	SSF52440	PreATP-grasp domain
CLD04_RS06585	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS06590	SSF53671	Aspartate/ornithine carbamoyltransferase
CLD04_RS06605	SSF53474	alpha/beta-Hydrolases
CLD04_RS06615	SSF53822	Periplasmic binding protein-like I
CLD04_RS06630	SSF53901	Thiolase-like
CLD04_RS06635	SSF53901	Thiolase-like
CLD04_RS06645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS06650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS06655	SSF53850	Periplasmic binding protein-like II
CLD04_RS06660	SSF161098	MetI-like
CLD04_RS06665	SSF161098	MetI-like
CLD04_RS06675	SSF52374	Nucleotidylyl transferase
CLD04_RS06680	SSF53850	Periplasmic binding protein-like II
CLD04_RS06685	SSF161098	MetI-like
CLD04_RS06690	SSF161098	MetI-like
CLD04_RS06695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS06700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS06705	SSF103473	MFS general substrate transporter
CLD04_RS06710	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS06715	SSF52833	Thioredoxin-like
CLD04_RS06735	SSF55486	Metalloproteases ("zincins"), catalytic domain
CLD04_RS06750	SSF52833	Thioredoxin-like
CLD04_RS06755	SSF46458	Globin-like
CLD04_RS06760	SSF53955	Lysozyme-like
CLD04_RS06765	SSF55154	CYTH-like phosphatases
CLD04_RS06775	SSF81301	Nucleotidyltransferase
CLD04_RS06780	SSF111331	NAD kinase/diacylglycerol kinase-like
CLD04_RS06785	SSF55120	Pseudouridine synthase
CLD04_RS06790	SSF56300	Metallo-dependent phosphatases
CLD04_RS06795	SSF116726	TrkA C-terminal domain-like
CLD04_RS06795	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS06800	SSF48613	Heme oxygenase-like
CLD04_RS06805	SSF51391	Thiamin phosphate synthase
CLD04_RS06810	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS06810	SSF54373	FAD-linked reductases, C-terminal domain
CLD04_RS06815	SSF54285	MoaD/ThiS
CLD04_RS06820	SSF110399	ThiG-like
CLD04_RS06825	SSF69572	Activating enzymes of the ubiquitin-like proteins
CLD04_RS06830	SSF53613	Ribokinase-like
CLD04_RS06835	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS06890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS06900	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS06905	SSF55144	LigT-like
CLD04_RS06910	SSF53474	alpha/beta-Hydrolases
CLD04_RS06915	SSF53383	PLP-dependent transferases
CLD04_RS06920	SSF53383	PLP-dependent transferases
CLD04_RS06925	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS07000	SSF46689	Homeodomain-like
CLD04_RS07005	SSF53098	Ribonuclease H-like
CLD04_RS07020	SSF46689	Homeodomain-like
CLD04_RS07025	SSF53098	Ribonuclease H-like
CLD04_RS07035	SSF48452	TPR-like
CLD04_RS07045	SSF160631	SMI1/KNR4-like
CLD04_RS07055	SSF53098	Ribonuclease H-like
CLD04_RS07095	SSF46689	Homeodomain-like
CLD04_RS07100	SSF53098	Ribonuclease H-like
CLD04_RS07130	SSF54909	Dimeric alpha+beta barrel
CLD04_RS07135	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS07140	SSF49373	Invasin/intimin cell-adhesion fragments
CLD04_RS07145	SSF52794	PTS system IIB component-like
CLD04_RS07145	SSF55804	Phoshotransferase/anion transport protein
CLD04_RS07145	SSF63520	PTS-regulatory domain, PRD
CLD04_RS07150	SSF52794	PTS system IIB component-like
CLD04_RS07150	SSF55804	Phoshotransferase/anion transport protein
CLD04_RS07155	SSF51182	RmlC-like cupins
CLD04_RS07165	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS07175	SSF55826	YbaK/ProRS associated domain
CLD04_RS07205	SSF88713	Glycoside hydrolase/deacetylase
CLD04_RS07250	SSF55811	Nudix
CLD04_RS07260	SSF48264	Cytochrome P450
CLD04_RS07265	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS07275	SSF69618	HemD-like
CLD04_RS07285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS07295	SSF51182	RmlC-like cupins
CLD04_RS07305	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS07310	SSF51556	Metallo-dependent hydrolases
CLD04_RS07315	SSF103473	MFS general substrate transporter
CLD04_RS07320	SSF89733	L-sulfolactate dehydrogenase-like
CLD04_RS07325	SSF50129	GroES-like
CLD04_RS07325	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS07330	SSF51658	Xylose isomerase-like
CLD04_RS07335	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS07340	SSF103473	MFS general substrate transporter
CLD04_RS07345	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS07345	SSF53822	Periplasmic binding protein-like I
CLD04_RS07350	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS07350	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS07365	SSF109854	DinB/YfiT-like putative metalloenzymes
CLD04_RS07370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS07375	SSF48452	TPR-like
CLD04_RS07385	SSF54909	Dimeric alpha+beta barrel
CLD04_RS07390	SSF47090	PGBD-like
CLD04_RS07390	SSF54106	LysM domain
CLD04_RS07390	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
CLD04_RS07395	SSF50729	PH domain-like
CLD04_RS07405	SSF47240	Ferritin-like
CLD04_RS07415	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS07425	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS07430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS07450	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS07475	SSF56563	Major capsid protein gp5
CLD04_RS07480	SSF116915	Hypothetical protein YqbG
CLD04_RS07510	SSF69279	Phage tail proteins
CLD04_RS07525	SSF53955	Lysozyme-like
CLD04_RS07530	SSF54106	LysM domain
CLD04_RS07535	SSF69279	Phage tail proteins
CLD04_RS07565	SSF49842	TNF-like
CLD04_RS07570	SSF159865	XkdW-like
CLD04_RS07595	SSF47090	PGBD-like
CLD04_RS07595	SSF54106	LysM domain
CLD04_RS07595	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
CLD04_RS07615	SSF109755	PhoU-like
CLD04_RS07625	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS07635	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS07640	SSF50156	PDZ domain-like
CLD04_RS07640	SSF50494	Trypsin-like serine proteases
CLD04_RS07645	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS07645	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS07650	SSF63992	Dipeptide transport protein
CLD04_RS07655	SSF161098	MetI-like
CLD04_RS07660	SSF161098	MetI-like
CLD04_RS07665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS07670	SSF53850	Periplasmic binding protein-like II
CLD04_RS07675	SSF141986	LD-carboxypeptidase A C-terminal domain-like
CLD04_RS07675	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS07680	SSF51604	Enolase C-terminal domain-like
CLD04_RS07680	SSF54826	Enolase N-terminal domain-like
CLD04_RS07685	SSF54001	Cysteine proteinases
CLD04_RS07690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS07695	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
CLD04_RS07700	SSF55909	Pentein
CLD04_RS07705	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CLD04_RS07710	SSF46458	Globin-like
CLD04_RS07710	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CLD04_RS07710	SSF63380	Riboflavin synthase domain-like
CLD04_RS07725	SSF109854	DinB/YfiT-like putative metalloenzymes
CLD04_RS07730	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS07735	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS07740	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS07745	SSF53328	Formyltransferase
CLD04_RS07745	SSF55021	ACT-like
CLD04_RS07750	SSF53633	Carbamate kinase-like
CLD04_RS07750	SSF88697	PUA domain-like
CLD04_RS07755	SSF53720	ALDH-like
CLD04_RS07760	SSF82784	OsmC-like
CLD04_RS07765	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS07770	SSF82784	OsmC-like
CLD04_RS07780	SSF53927	Cytidine deaminase-like
CLD04_RS07785	SSF53254	Phosphoglycerate mutase-like
CLD04_RS07790	SSF51726	UROD/MetE-like
CLD04_RS07795	SSF52743	Subtilisin-like
CLD04_RS07800	SSF52091	SpoIIaa-like
CLD04_RS07810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS07820	SSF89957	MTH1187/YkoF-like
CLD04_RS07825	SSF52172	CheY-like
CLD04_RS07830	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS07830	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS07855	SSF158791	MgtE N-terminal domain-like
CLD04_RS07855	SSF161093	MgtE membrane domain-like
CLD04_RS07855	SSF54631	CBS-domain pair
CLD04_RS07860	SSF46955	Putative DNA-binding domain
CLD04_RS07875	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS07880	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS07890	SSF56300	Metallo-dependent phosphatases
CLD04_RS07900	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS07905	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
CLD04_RS07910	SSF100939	SPOC domain-like
CLD04_RS07915	SSF141868	EAL domain-like
CLD04_RS07915	SSF55073	Nucleotide cyclase
CLD04_RS07915	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS07925	SSF103473	MFS general substrate transporter
CLD04_RS07930	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS07975	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS07975	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS07975	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS07980	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
CLD04_RS07980	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
CLD04_RS07985	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS07990	SSF56112	Protein kinase-like (PK-like)
CLD04_RS07995	SSF56317	Carbon-nitrogen hydrolase
CLD04_RS08000	SSF53383	PLP-dependent transferases
CLD04_RS08005	SSF51649	RuBisCo, C-terminal domain
CLD04_RS08005	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
CLD04_RS08010	SSF56784	HAD-like
CLD04_RS08015	SSF53639	AraD/HMP-PK domain-like
CLD04_RS08020	SSF51182	RmlC-like cupins
CLD04_RS08030	SSF140500	BAS1536-like
CLD04_RS08040	SSF103190	Sensory domain-like
CLD04_RS08040	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS08040	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS08045	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS08050	SSF103088	OmpA-like
CLD04_RS08060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS08070	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS08075	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CLD04_RS08080	SSF102114	Radical SAM enzymes
CLD04_RS08085	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CLD04_RS08090	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS08095	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS08100	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS08100	SSF54106	LysM domain
CLD04_RS08105	SSF54106	LysM domain
CLD04_RS08110	SSF51445	(Trans)glycosidases
CLD04_RS08115	SSF159173	YkvR-like
CLD04_RS08140	SSF52833	Thioredoxin-like
CLD04_RS08145	SSF56784	HAD-like
CLD04_RS08145	SSF81653	Calcium ATPase, transduction domain A
CLD04_RS08145	SSF81665	Calcium ATPase, transmembrane domain M
CLD04_RS08155	SSF53092	Creatinase/prolidase N-terminal domain
CLD04_RS08155	SSF55920	Creatinase/aminopeptidase
CLD04_RS08160	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS08160	SSF53822	Periplasmic binding protein-like I
CLD04_RS08165	SSF50151	SacY-like RNA-binding domain
CLD04_RS08165	SSF63520	PTS-regulatory domain, PRD
CLD04_RS08170	SSF51261	Duplicated hybrid motif
CLD04_RS08170	SSF55604	Glucose permease domain IIB
CLD04_RS08175	SSF55594	HPr-like
CLD04_RS08180	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
CLD04_RS08180	SSF51621	Phosphoenolpyruvate/pyruvate domain
CLD04_RS08180	SSF52009	Phosphohistidine domain
CLD04_RS08195	SSF102114	Radical SAM enzymes
CLD04_RS08200	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS08205	SSF103190	Sensory domain-like
CLD04_RS08205	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS08210	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS08210	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS08215	SSF55797	PR-1-like
CLD04_RS08220	SSF56519	Penicillin binding protein dimerisation domain
CLD04_RS08220	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS08225	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS08225	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS08225	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS08230	SSF53383	PLP-dependent transferases
CLD04_RS08240	SSF50341	CheW-like
CLD04_RS08240	SSF52172	CheY-like
CLD04_RS08250	SSF103473	MFS general substrate transporter
CLD04_RS08255	SSF141523	L,D-transpeptidase catalytic domain-like
CLD04_RS08255	SSF54106	LysM domain
CLD04_RS08260	SSF56300	Metallo-dependent phosphatases
CLD04_RS08265	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS08270	SSF103190	Sensory domain-like
CLD04_RS08270	SSF141868	EAL domain-like
CLD04_RS08275	SSF143567	YkuJ-like
CLD04_RS08290	SSF54631	CBS-domain pair
CLD04_RS08295	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS08295	SSF53850	Periplasmic binding protein-like II
CLD04_RS08300	SSF52218	Flavoproteins
CLD04_RS08305	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
CLD04_RS08310	SSF52218	Flavoproteins
CLD04_RS08315	SSF51161	Trimeric LpxA-like enzymes
CLD04_RS08320	SSF53187	Zn-dependent exopeptidases
CLD04_RS08320	SSF55031	Bacterial exopeptidase dimerisation domain
CLD04_RS08335	SSF50182	Sm-like ribonucleoproteins
CLD04_RS08335	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
CLD04_RS08335	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
CLD04_RS08340	SSF52833	Thioredoxin-like
CLD04_RS08345	SSF52833	Thioredoxin-like
CLD04_RS08365	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS08370	SSF69572	Activating enzymes of the ubiquitin-like proteins
CLD04_RS08375	SSF53218	Molybdenum cofactor biosynthesis proteins
CLD04_RS08375	SSF63867	MoeA C-terminal domain-like
CLD04_RS08375	SSF63882	MoeA N-terminal region -like
CLD04_RS08380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS08385	SSF54690	Molybdopterin synthase subunit MoaE
CLD04_RS08390	SSF54285	MoaD/ThiS
CLD04_RS08395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS08395	SSF90123	ABC transporter transmembrane region
CLD04_RS08400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS08400	SSF90123	ABC transporter transmembrane region
CLD04_RS08415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS08425	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS08425	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS08430	SSF53613	Ribokinase-like
CLD04_RS08435	SSF52794	PTS system IIB component-like
CLD04_RS08435	SSF55804	Phoshotransferase/anion transport protein
CLD04_RS08440	SSF51306	LexA/Signal peptidase
CLD04_RS08450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS08455	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS08455	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS08460	SSF144052	Thermophilic metalloprotease-like
CLD04_RS08470	SSF53067	Actin-like ATPase domain
CLD04_RS08475	SSF89447	AbrB/MazE/MraZ-like
CLD04_RS08480	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS08480	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS08480	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS08485	SSF110857	Gamma-glutamyl cyclotransferase-like
CLD04_RS08490	SSF116726	TrkA C-terminal domain-like
CLD04_RS08490	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS08495	SSF51338	Composite domain of metallo-dependent hydrolases
CLD04_RS08495	SSF51556	Metallo-dependent hydrolases
CLD04_RS08500	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS08510	SSF56784	HAD-like
CLD04_RS08515	SSF56420	Peptide deformylase
CLD04_RS08525	SSF140423	MW0975(SA0943)-like
CLD04_RS08530	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS08535	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS08535	SSF52922	TK C-terminal domain-like
CLD04_RS08540	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
CLD04_RS08540	SSF51230	Single hybrid motif
CLD04_RS08540	SSF52777	CoA-dependent acyltransferases
CLD04_RS08545	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS08545	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CLD04_RS08560	SSF53383	PLP-dependent transferases
CLD04_RS08560	SSF55904	Ornithine decarboxylase C-terminal domain
CLD04_RS08565	SSF158504	BH2638-like
CLD04_RS08570	SSF142913	YktB/PF0168-like
CLD04_RS08580	SSF56655	Carbohydrate phosphatase
CLD04_RS08585	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS08590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS08595	SSF55486	Metalloproteases ("zincins"), catalytic domain
CLD04_RS08610	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS08610	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS08630	SSF50447	Translation proteins
CLD04_RS08630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS08630	SSF54980	EF-G C-terminal domain-like
CLD04_RS08650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS08650	SSF88723	PIN domain-like
CLD04_RS08660	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS08665	SSF140404	EF2458-like
CLD04_RS08675	SSF51230	Single hybrid motif
CLD04_RS08675	SSF51246	Rudiment single hybrid motif
CLD04_RS08675	SSF51569	Aldolase
CLD04_RS08675	SSF52440	PreATP-grasp domain
CLD04_RS08675	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS08675	SSF89000	post-HMGL domain-like
CLD04_RS08690	SSF46626	Cytochrome c
CLD04_RS08690	SSF49503	Cupredoxins
CLD04_RS08690	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
CLD04_RS08695	SSF81442	Cytochrome c oxidase subunit I-like
CLD04_RS08700	SSF81452	Cytochrome c oxidase subunit III-like
CLD04_RS08715	SSF160755	YugN-like
CLD04_RS08720	SSF54631	CBS-domain pair
CLD04_RS08725	SSF55797	PR-1-like
CLD04_RS08740	SSF158622	YheA/YmcA-like
CLD04_RS08750	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS08755	SSF52374	Nucleotidylyl transferase
CLD04_RS08765	SSF52151	FabD/lysophospholipase-like
CLD04_RS08770	SSF50156	PDZ domain-like
CLD04_RS08770	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS08775	SSF52374	Nucleotidylyl transferase
CLD04_RS08790	SSF57829	Zn-binding ribosomal proteins
CLD04_RS08795	SSF46689	Homeodomain-like
CLD04_RS08800	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS08805	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS08805	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS08815	SSF89447	AbrB/MazE/MraZ-like
CLD04_RS08820	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS08820	SSF81799	Putative methyltransferase TM0872, insert domain
CLD04_RS08830	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
CLD04_RS08830	SSF56519	Penicillin binding protein dimerisation domain
CLD04_RS08830	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS08835	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
CLD04_RS08835	SSF56519	Penicillin binding protein dimerisation domain
CLD04_RS08835	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS08840	SSF53244	MurD-like peptide ligases, peptide-binding domain
CLD04_RS08840	SSF53623	MurD-like peptide ligases, catalytic domain
CLD04_RS08840	SSF63418	MurE/MurF N-terminal domain
CLD04_RS08850	SSF51984	MurCD N-terminal domain
CLD04_RS08850	SSF53244	MurD-like peptide ligases, peptide-binding domain
CLD04_RS08850	SSF53623	MurD-like peptide ligases, catalytic domain
CLD04_RS08860	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS08865	SSF56176	FAD-binding/transporter-associated domain-like
CLD04_RS08865	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
CLD04_RS08890	SSF53067	Actin-like ATPase domain
CLD04_RS08895	SSF52490	Tubulin nucleotide-binding domain-like
CLD04_RS08895	SSF55307	Tubulin C-terminal domain-like
CLD04_RS08900	SSF52777	CoA-dependent acyltransferases
CLD04_RS08900	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS08905	SSF47336	ACP-like
CLD04_RS08910	SSF52777	CoA-dependent acyltransferases
CLD04_RS08910	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS08915	SSF47336	ACP-like
CLD04_RS08915	SSF52777	CoA-dependent acyltransferases
CLD04_RS08920	SSF52777	CoA-dependent acyltransferases
CLD04_RS08925	SSF52777	CoA-dependent acyltransferases
CLD04_RS08930	SSF52777	CoA-dependent acyltransferases
CLD04_RS08935	SSF52777	CoA-dependent acyltransferases
CLD04_RS08935	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS08940	SSF47336	ACP-like
CLD04_RS08940	SSF52777	CoA-dependent acyltransferases
CLD04_RS08940	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS08945	SSF52777	CoA-dependent acyltransferases
CLD04_RS08945	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS08950	SSF47336	ACP-like
CLD04_RS08950	SSF52777	CoA-dependent acyltransferases
CLD04_RS08950	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS08955	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS08960	SSF47336	ACP-like
CLD04_RS08960	SSF52777	CoA-dependent acyltransferases
CLD04_RS08960	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS08965	SSF47336	ACP-like
CLD04_RS08965	SSF52777	CoA-dependent acyltransferases
CLD04_RS08965	SSF53474	alpha/beta-Hydrolases
CLD04_RS08965	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS08970	SSF55307	Tubulin C-terminal domain-like
CLD04_RS08975	SSF49464	Carboxypeptidase regulatory domain-like
CLD04_RS08975	SSF49899	Concanavalin A-like lectins/glucanases
CLD04_RS08975	SSF52743	Subtilisin-like
CLD04_RS08985	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS08985	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS08990	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS08990	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS08995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09000	SSF53187	Zn-dependent exopeptidases
CLD04_RS09000	SSF55031	Bacterial exopeptidase dimerisation domain
CLD04_RS09005	SSF50346	PRC-barrel domain
CLD04_RS09010	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
CLD04_RS09015	SSF51419	PLP-binding barrel
CLD04_RS09030	SSF55174	Alpha-L RNA-binding motif
CLD04_RS09040	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CLD04_RS09040	SSF50677	ValRS/IleRS/LeuRS editing domain
CLD04_RS09040	SSF52374	Nucleotidylyl transferase
CLD04_RS09055	SSF55120	Pseudouridine synthase
CLD04_RS09055	SSF55174	Alpha-L RNA-binding motif
CLD04_RS09060	SSF53271	PRTase-like
CLD04_RS09070	SSF53671	Aspartate/ornithine carbamoyltransferase
CLD04_RS09075	SSF51338	Composite domain of metallo-dependent hydrolases
CLD04_RS09075	SSF51556	Metallo-dependent hydrolases
CLD04_RS09080	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
CLD04_RS09080	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS09085	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
CLD04_RS09085	SSF52335	Methylglyoxal synthase-like
CLD04_RS09085	SSF52440	PreATP-grasp domain
CLD04_RS09085	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS09090	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CLD04_RS09090	SSF63380	Riboflavin synthase domain-like
CLD04_RS09095	SSF51395	FMN-linked oxidoreductases
CLD04_RS09100	SSF51366	Ribulose-phoshate binding barrel
CLD04_RS09105	SSF53271	PRTase-like
CLD04_RS09110	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS09120	SSF52374	Nucleotidylyl transferase
CLD04_RS09120	SSF88697	PUA domain-like
CLD04_RS09125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09130	SSF53790	Tetrapyrrole methylase
CLD04_RS09135	SSF53800	Chelatase
CLD04_RS09140	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS09140	SSF75615	Siroheme synthase middle domains-like
CLD04_RS09150	SSF56784	HAD-like
CLD04_RS09150	SSF81653	Calcium ATPase, transduction domain A
CLD04_RS09150	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
CLD04_RS09150	SSF81665	Calcium ATPase, transmembrane domain M
CLD04_RS09165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09170	SSF63562	RPB6/omega subunit-like
CLD04_RS09175	SSF102645	CoaB-like
CLD04_RS09175	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
CLD04_RS09180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09185	SSF56420	Peptide deformylase
CLD04_RS09190	SSF50486	FMT C-terminal domain-like
CLD04_RS09190	SSF53328	Formyltransferase
CLD04_RS09195	SSF48013	NusB-like
CLD04_RS09195	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS09200	SSF102114	Radical SAM enzymes
CLD04_RS09205	SSF81606	PP2C-like
CLD04_RS09210	SSF56112	Protein kinase-like (PK-like)
CLD04_RS09215	SSF50249	Nucleic acid-binding proteins
CLD04_RS09215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09220	SSF51366	Ribulose-phoshate binding barrel
CLD04_RS09225	SSF63862	Thiamin pyrophosphokinase, substrate-binding domain
CLD04_RS09225	SSF63999	Thiamin pyrophosphokinase, catalytic domain
CLD04_RS09235	SSF143800	L28p-like
CLD04_RS09245	SSF101473	DhaL-like
CLD04_RS09250	SSF143548	Serine metabolism enzymes domain
CLD04_RS09250	SSF55021	ACT-like
CLD04_RS09260	SSF50249	Nucleic acid-binding proteins
CLD04_RS09260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09265	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CLD04_RS09270	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CLD04_RS09275	SSF52151	FabD/lysophospholipase-like
CLD04_RS09275	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
CLD04_RS09280	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS09285	SSF47336	ACP-like
CLD04_RS09290	SSF54768	dsRNA-binding domain-like
CLD04_RS09290	SSF69065	RNase III domain-like
CLD04_RS09295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09295	SSF57997	Tropomyosin
CLD04_RS09295	SSF75553	Smc hinge domain
CLD04_RS09300	SSF47364	Domain of the SRP/SRP receptor G-proteins
CLD04_RS09300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09310	SSF49464	Carboxypeptidase regulatory domain-like
CLD04_RS09315	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS09320	SSF47446	Signal peptide-binding domain
CLD04_RS09320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09325	SSF54565	Ribosomal protein S16
CLD04_RS09330	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CLD04_RS09340	SSF50346	PRC-barrel domain
CLD04_RS09340	SSF50447	Translation proteins
CLD04_RS09345	SSF75217	alpha/beta knot
CLD04_RS09350	SSF50104	Translation proteins SH3-like domain
CLD04_RS09355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09360	SSF53098	Ribonuclease H-like
CLD04_RS09370	SSF160544	EscU C-terminal domain-like
CLD04_RS09375	SSF52210	Succinyl-CoA synthetase domains
CLD04_RS09375	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS09380	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS09380	SSF52210	Succinyl-CoA synthetase domains
CLD04_RS09385	SSF102405	MCP/YpsA-like
CLD04_RS09390	SSF56712	Prokaryotic type I DNA topoisomerase
CLD04_RS09390	SSF57783	Zinc beta-ribbon
CLD04_RS09395	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS09400	SSF56349	DNA breaking-rejoining enzymes
CLD04_RS09405	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CLD04_RS09410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09415	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS09440	SSF48029	FliG
CLD04_RS09450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09460	SSF158791	MgtE N-terminal domain-like
CLD04_RS09475	SSF117143	Flagellar hook protein flgE
CLD04_RS09490	SSF101801	Surface presentation of antigens (SPOA)
CLD04_RS09490	SSF103039	CheC-like
CLD04_RS09495	SSF101801	Surface presentation of antigens (SPOA)
CLD04_RS09495	SSF103039	CheC-like
CLD04_RS09500	SSF52172	CheY-like
CLD04_RS09525	SSF160544	EscU C-terminal domain-like
CLD04_RS09535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09545	SSF52172	CheY-like
CLD04_RS09545	SSF52738	Methylesterase CheB, C-terminal domain
CLD04_RS09550	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
CLD04_RS09550	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS09550	SSF50341	CheW-like
CLD04_RS09550	SSF55052	CheY-binding domain of CheA
CLD04_RS09550	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS09555	SSF50341	CheW-like
CLD04_RS09560	SSF103039	CheC-like
CLD04_RS09565	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
CLD04_RS09570	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS09570	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS09580	SSF52313	Ribosomal protein S2
CLD04_RS09585	SSF46934	UBA-like
CLD04_RS09585	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
CLD04_RS09590	SSF53633	Carbamate kinase-like
CLD04_RS09595	SSF55194	Ribosome recycling factor, RRF
CLD04_RS09600	SSF64005	Undecaprenyl diphosphate synthase
CLD04_RS09610	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS09610	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS09610	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
CLD04_RS09615	SSF50156	PDZ domain-like
CLD04_RS09620	SSF52954	Class II aaRS ABD-related
CLD04_RS09620	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS09620	SSF55826	YbaK/ProRS associated domain
CLD04_RS09625	SSF50249	Nucleic acid-binding proteins
CLD04_RS09625	SSF53098	Ribonuclease H-like
CLD04_RS09630	SSF74942	YhbC-like, C-terminal domain
CLD04_RS09630	SSF75420	YhbC-like, N-terminal domain
CLD04_RS09635	SSF50249	Nucleic acid-binding proteins
CLD04_RS09635	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CLD04_RS09635	SSF69705	Transcription factor NusA, N-terminal domain
CLD04_RS09640	SSF64376	YlxR-like
CLD04_RS09645	SSF55315	L30e-like
CLD04_RS09650	SSF50447	Translation proteins
CLD04_RS09650	SSF52156	Initiation factor IF2/eIF5b, domain 3
CLD04_RS09650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09655	SSF103007	Hypothetical protein TT1725
CLD04_RS09660	SSF89919	Ribosome-binding factor A, RbfA
CLD04_RS09665	SSF55120	Pseudouridine synthase
CLD04_RS09670	SSF52374	Nucleotidylyl transferase
CLD04_RS09670	SSF82114	Riboflavin kinase-like
CLD04_RS09675	SSF47060	S15/NS1 RNA-binding domain
CLD04_RS09680	SSF50249	Nucleic acid-binding proteins
CLD04_RS09680	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS09680	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
CLD04_RS09680	SSF55666	Ribonuclease PH domain 2-like
CLD04_RS09685	SSF88713	Glycoside hydrolase/deacetylase
CLD04_RS09690	SSF63411	LuxS/MPP-like metallohydrolase
CLD04_RS09695	SSF50346	PRC-barrel domain
CLD04_RS09700	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS09705	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
CLD04_RS09710	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS09710	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS09715	SSF53633	Carbamate kinase-like
CLD04_RS09715	SSF55021	ACT-like
CLD04_RS09720	SSF51569	Aldolase
CLD04_RS09725	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS09730	SSF52096	ClpP/crotonase
CLD04_RS09740	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS09740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09745	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS09745	SSF64288	Chorismate lyase-like
CLD04_RS09750	SSF103473	MFS general substrate transporter
CLD04_RS09755	SSF63411	LuxS/MPP-like metallohydrolase
CLD04_RS09760	SSF63411	LuxS/MPP-like metallohydrolase
CLD04_RS09765	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS09775	SSF55021	ACT-like
CLD04_RS09780	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS09790	SSF142433	CinA-like
CLD04_RS09790	SSF53218	Molybdenum cofactor biosynthesis proteins
CLD04_RS09795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09795	SSF54752	RecA protein, C-terminal domain
CLD04_RS09800	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS09805	SSF109604	HD-domain/PDEase-like
CLD04_RS09805	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
CLD04_RS09810	SSF56300	Metallo-dependent phosphatases
CLD04_RS09820	SSF50129	GroES-like
CLD04_RS09820	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS09825	SSF53383	PLP-dependent transferases
CLD04_RS09830	SSF102114	Radical SAM enzymes
CLD04_RS09835	SSF158622	YheA/YmcA-like
CLD04_RS09845	SSF48334	DNA repair protein MutS, domain III
CLD04_RS09845	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09845	SSF53150	DNA repair protein MutS, domain II
CLD04_RS09845	SSF55271	DNA repair protein MutS, domain I
CLD04_RS09850	SSF118116	DNA mismatch repair protein MutL
CLD04_RS09850	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS09850	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS09865	SSF46689	Homeodomain-like
CLD04_RS09865	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS09875	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS09880	SSF52743	Subtilisin-like
CLD04_RS09895	SSF82784	OsmC-like
CLD04_RS09900	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS09905	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS09920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09925	SSF50182	Sm-like ribonucleoproteins
CLD04_RS09940	SSF52218	Flavoproteins
CLD04_RS09945	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
CLD04_RS09945	SSF51998	PFL-like glycyl radical enzymes
CLD04_RS09950	SSF47240	Ferritin-like
CLD04_RS09955	SSF55811	Nudix
CLD04_RS09960	SSF110997	Sporulation related repeat
CLD04_RS09960	SSF53187	Zn-dependent exopeptidases
CLD04_RS09970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS09980	SSF53383	PLP-dependent transferases
CLD04_RS09985	SSF46955	Putative DNA-binding domain
CLD04_RS09990	SSF54368	Glutamine synthetase, N-terminal domain
CLD04_RS09990	SSF55931	Glutamine synthetase/guanido kinase
CLD04_RS09995	SSF47090	PGBD-like
CLD04_RS10030	SSF58100	Bacterial hemolysins
CLD04_RS10040	SSF160631	SMI1/KNR4-like
CLD04_RS10055	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS10060	SSF53098	Ribonuclease H-like
CLD04_RS10065	SSF46689	Homeodomain-like
CLD04_RS10075	SSF53098	Ribonuclease H-like
CLD04_RS10080	SSF46689	Homeodomain-like
CLD04_RS10120	SSF103473	MFS general substrate transporter
CLD04_RS10125	SSF49899	Concanavalin A-like lectins/glucanases
CLD04_RS10125	SSF75005	Arabinanase/levansucrase/invertase
CLD04_RS10130	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS10130	SSF53067	Actin-like ATPase domain
CLD04_RS10135	SSF51658	Xylose isomerase-like
CLD04_RS10140	SSF53067	Actin-like ATPase domain
CLD04_RS10155	SSF50199	Staphylococcal nuclease
CLD04_RS10160	SSF103473	MFS general substrate transporter
CLD04_RS10165	SSF50621	Alanine racemase C-terminal domain-like
CLD04_RS10165	SSF51419	PLP-binding barrel
CLD04_RS10175	SSF51283	dUTPase-like
CLD04_RS10190	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
CLD04_RS10235	SSF55961	Bet v1-like
CLD04_RS10260	SSF55961	Bet v1-like
CLD04_RS10290	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS10300	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS10300	SSF51306	LexA/Signal peptidase
CLD04_RS10305	SSF54106	LysM domain
CLD04_RS10310	SSF53041	Resolvase-like
CLD04_RS10315	SSF158221	YnzC-like
CLD04_RS10320	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS10320	SSF52922	TK C-terminal domain-like
CLD04_RS10335	SSF140500	BAS1536-like
CLD04_RS10345	SSF52172	CheY-like
CLD04_RS10360	SSF49764	HSP20-like chaperones
CLD04_RS10375	SSF52016	LeuD/IlvD-like
CLD04_RS10375	SSF53732	Aconitase iron-sulfur domain
CLD04_RS10380	SSF52833	Thioredoxin-like
CLD04_RS10400	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CLD04_RS10410	SSF89360	HesB-like domain
CLD04_RS10420	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS10425	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS10425	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS10425	SSF56719	Type II DNA topoisomerase
CLD04_RS10430	SSF101904	GyrA/ParC C-terminal domain-like
CLD04_RS10430	SSF56719	Type II DNA topoisomerase
CLD04_RS10445	SSF49384	Carbohydrate-binding domain
CLD04_RS10445	SSF51445	(Trans)glycosidases
CLD04_RS10460	SSF49785	Galactose-binding domain-like
CLD04_RS10460	SSF75005	Arabinanase/levansucrase/invertase
CLD04_RS10470	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS10480	SSF64182	DHH phosphoesterases
CLD04_RS10485	SSF52096	ClpP/crotonase
CLD04_RS10490	SSF52096	ClpP/crotonase
CLD04_RS10495	SSF51569	Aldolase
CLD04_RS10500	SSF51230	Single hybrid motif
CLD04_RS10505	SSF51246	Rudiment single hybrid motif
CLD04_RS10505	SSF52440	PreATP-grasp domain
CLD04_RS10505	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS10510	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS10515	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CLD04_RS10515	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CLD04_RS10525	SSF51445	(Trans)glycosidases
CLD04_RS10535	SSF47336	ACP-like
CLD04_RS10535	SSF52777	CoA-dependent acyltransferases
CLD04_RS10535	SSF53474	alpha/beta-Hydrolases
CLD04_RS10535	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS10545	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS10550	SSF74650	Galactose mutarotase-like
CLD04_RS10570	SSF56349	DNA breaking-rejoining enzymes
CLD04_RS10580	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CLD04_RS10585	SSF50129	GroES-like
CLD04_RS10585	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS10590	SSF46548	alpha-helical ferredoxin
CLD04_RS10590	SSF51971	Nucleotide-binding domain
CLD04_RS10595	SSF51395	FMN-linked oxidoreductases
CLD04_RS10595	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CLD04_RS10595	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
CLD04_RS10600	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS10600	SSF53850	Periplasmic binding protein-like II
CLD04_RS10605	SSF53633	Carbamate kinase-like
CLD04_RS10605	SSF88697	PUA domain-like
CLD04_RS10610	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS10610	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS10615	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS10620	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS10635	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS10640	SSF103473	MFS general substrate transporter
CLD04_RS10645	SSF53067	Actin-like ATPase domain
CLD04_RS10650	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS10650	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CLD04_RS10655	SSF50692	ADC-like
CLD04_RS10655	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CLD04_RS10665	SSF103473	MFS general substrate transporter
CLD04_RS10670	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS10670	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS10675	SSF51658	Xylose isomerase-like
CLD04_RS10680	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS10680	SSF53822	Periplasmic binding protein-like I
CLD04_RS10700	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS10705	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CLD04_RS10705	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CLD04_RS10710	SSF49590	PHL pollen allergen
CLD04_RS10710	SSF50685	Barwin-like endoglucanases
CLD04_RS10720	SSF51126	Pectin lyase-like
CLD04_RS10725	SSF143081	BB1717-like
CLD04_RS10765	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS10775	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS10775	SSF53850	Periplasmic binding protein-like II
CLD04_RS10780	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS10795	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS10800	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS10825	SSF52009	Phosphohistidine domain
CLD04_RS10825	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS10830	SSF49899	Concanavalin A-like lectins/glucanases
CLD04_RS10890	SSF53098	Ribonuclease H-like
CLD04_RS10900	SSF46689	Homeodomain-like
CLD04_RS10915	SSF143081	BB1717-like
CLD04_RS10925	SSF48452	TPR-like
CLD04_RS10935	SSF46689	Homeodomain-like
CLD04_RS10940	SSF53098	Ribonuclease H-like
CLD04_RS10965	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS10970	SSF160631	SMI1/KNR4-like
CLD04_RS10975	SSF160631	SMI1/KNR4-like
CLD04_RS10980	SSF54060	His-Me finger endonucleases
CLD04_RS10985	SSF160631	SMI1/KNR4-like
CLD04_RS10990	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS10990	SSF54373	FAD-linked reductases, C-terminal domain
CLD04_RS10995	SSF50249	Nucleic acid-binding proteins
CLD04_RS11000	SSF46689	Homeodomain-like
CLD04_RS11000	SSF51182	RmlC-like cupins
CLD04_RS11005	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS11010	SSF46689	Homeodomain-like
CLD04_RS11010	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS11015	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS11020	SSF55136	Probable bacterial effector-binding domain
CLD04_RS11025	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS11035	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS11040	SSF53955	Lysozyme-like
CLD04_RS11055	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS11060	SSF141986	LD-carboxypeptidase A C-terminal domain-like
CLD04_RS11060	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS11070	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS11075	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS11075	SSF52172	CheY-like
CLD04_RS11080	SSF50685	Barwin-like endoglucanases
CLD04_RS11080	SSF54106	LysM domain
CLD04_RS11085	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS11085	SSF47819	HRDC-like
CLD04_RS11085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS11100	SSF52218	Flavoproteins
CLD04_RS11105	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
CLD04_RS11105	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CLD04_RS11120	SSF49764	HSP20-like chaperones
CLD04_RS11135	SSF50729	PH domain-like
CLD04_RS11145	SSF53720	ALDH-like
CLD04_RS11150	SSF48239	Terpenoid cyclases/Protein prenyltransferases
CLD04_RS11155	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
CLD04_RS11155	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
CLD04_RS11160	SSF161070	SNF-like
CLD04_RS11170	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
CLD04_RS11170	SSF51230	Single hybrid motif
CLD04_RS11170	SSF52777	CoA-dependent acyltransferases
CLD04_RS11175	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS11180	SSF53300	vWA-like
CLD04_RS11185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS11190	SSF49329	Cu,Zn superoxide dismutase-like
CLD04_RS11195	SSF54001	Cysteine proteinases
CLD04_RS11195	SSF54106	LysM domain
CLD04_RS11200	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS11205	SSF143597	YojJ-like
CLD04_RS11215	SSF52091	SpoIIaa-like
CLD04_RS11220	SSF102588	LmbE-like
CLD04_RS11225	SSF89442	Hypothetical protein YojF
CLD04_RS11235	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS11240	SSF49764	HSP20-like chaperones
CLD04_RS11255	SSF55331	Tautomerase/MIF
CLD04_RS11260	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS11265	SSF55469	FMN-dependent nitroreductase-like
CLD04_RS11270	SSF53474	alpha/beta-Hydrolases
CLD04_RS11275	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS11295	SSF47090	PGBD-like
CLD04_RS11295	SSF50156	PDZ domain-like
CLD04_RS11295	SSF52096	ClpP/crotonase
CLD04_RS11300	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS11310	SSF55166	Hedgehog/DD-peptidase
CLD04_RS11315	SSF53167	Purine and uridine phosphorylases
CLD04_RS11330	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
CLD04_RS11355	SSF140652	YozE-like
CLD04_RS11370	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS11375	SSF53187	Zn-dependent exopeptidases
CLD04_RS11375	SSF55031	Bacterial exopeptidase dimerisation domain
CLD04_RS11380	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS11385	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS11390	SSF53383	PLP-dependent transferases
CLD04_RS11400	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS11405	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS11420	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS11425	SSF50956	Thermostable phytase (3-phytase)
CLD04_RS11430	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS11435	SSF51316	Mss4-like
CLD04_RS11440	SSF55068	Peptide methionine sulfoxide reductase
CLD04_RS11445	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS11465	SSF52266	SGNH hydrolase
CLD04_RS11470	SSF52833	Thioredoxin-like
CLD04_RS11480	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CLD04_RS11485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS11495	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CLD04_RS11500	SSF53597	Dihydrofolate reductase-like
CLD04_RS11505	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
CLD04_RS11510	SSF101307	YutG-like
CLD04_RS11520	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS11530	SSF143975	IlvD/EDD N-terminal domain-like
CLD04_RS11530	SSF52016	LeuD/IlvD-like
CLD04_RS11535	SSF110836	Hypothetical protein SAV1430
CLD04_RS11535	SSF48371	ARM repeat
CLD04_RS11540	SSF109604	HD-domain/PDEase-like
CLD04_RS11545	SSF52833	Thioredoxin-like
CLD04_RS11550	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS11555	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS11560	SSF50249	Nucleic acid-binding proteins
CLD04_RS11580	SSF53098	Ribonuclease H-like
CLD04_RS11590	SSF53098	Ribonuclease H-like
CLD04_RS11600	SSF47807	5' to 3' exonuclease, C-terminal subdomain
CLD04_RS11600	SSF88723	PIN domain-like
CLD04_RS11615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS11630	SSF53901	Thiolase-like
CLD04_RS11640	SSF53271	PRTase-like
CLD04_RS11645	SSF55486	Metalloproteases ("zincins"), catalytic domain
CLD04_RS11655	SSF51569	Aldolase
CLD04_RS11660	SSF53613	Ribokinase-like
CLD04_RS11665	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS11665	SSF53822	Periplasmic binding protein-like I
CLD04_RS11670	SSF51182	RmlC-like cupins
CLD04_RS11675	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS11680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS11695	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS11710	SSF102405	MCP/YpsA-like
CLD04_RS11720	SSF48452	TPR-like
CLD04_RS11720	SSF53098	Ribonuclease H-like
CLD04_RS11725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS11730	SSF51261	Duplicated hybrid motif
CLD04_RS11735	SSF49764	HSP20-like chaperones
CLD04_RS11750	SSF140415	YppE-like
CLD04_RS11770	SSF52980	Restriction endonuclease-like
CLD04_RS11775	SSF49265	Fibronectin type III
CLD04_RS11775	SSF53955	Lysozyme-like
CLD04_RS11775	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS11785	SSF48150	DNA-glycosylase
CLD04_RS11790	SSF158499	DnaD domain-like
CLD04_RS11795	SSF50249	Nucleic acid-binding proteins
CLD04_RS11795	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS11800	SSF53383	PLP-dependent transferases
CLD04_RS11805	SSF54403	Cystatin/monellin
CLD04_RS11815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS11815	SSF53098	Ribonuclease H-like
CLD04_RS11820	SSF50692	ADC-like
CLD04_RS11825	SSF52374	Nucleotidylyl transferase
CLD04_RS11830	SSF51621	Phosphoenolpyruvate/pyruvate domain
CLD04_RS11835	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS11835	SSF50037	C-terminal domain of transcriptional repressors
CLD04_RS11835	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS11840	SSF81301	Nucleotidyltransferase
CLD04_RS11840	SSF81891	Poly A polymerase C-terminal region-like
CLD04_RS11845	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS11850	SSF102588	LmbE-like
CLD04_RS11855	SSF52335	Methylglyoxal synthase-like
CLD04_RS11860	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS11860	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS11865	SSF101386	all-alpha NTP pyrophosphatases
CLD04_RS11885	SSF46626	Cytochrome c
CLD04_RS11885	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
CLD04_RS11890	SSF81342	Transmembrane di-heme cytochromes
CLD04_RS11895	SSF50022	ISP domain
CLD04_RS11910	SSF48452	TPR-like
CLD04_RS11915	SSF55205	EPT/RTPC-like
CLD04_RS11920	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS11920	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS11920	SSF55021	ACT-like
CLD04_RS11925	SSF53383	PLP-dependent transferases
CLD04_RS11930	SSF51366	Ribulose-phoshate binding barrel
CLD04_RS11935	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CLD04_RS11940	SSF51366	Ribulose-phoshate binding barrel
CLD04_RS11945	SSF51366	Ribulose-phoshate binding barrel
CLD04_RS11950	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
CLD04_RS11950	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
CLD04_RS11955	SSF56322	ADC synthase
CLD04_RS11960	SSF55298	YjgF-like
CLD04_RS11965	SSF56796	Dehydroquinate synthase-like
CLD04_RS11970	SSF103263	Chorismate synthase, AroC
CLD04_RS11975	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
CLD04_RS11975	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS11980	SSF54919	Nucleoside diphosphate kinase, NDK
CLD04_RS11985	SSF48576	Terpenoid synthases
CLD04_RS11990	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS12000	SSF51219	TRAP-like
CLD04_RS12005	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CLD04_RS12010	SSF47729	IHF-like DNA-binding proteins
CLD04_RS12015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS12030	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS12030	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS12065	SSF51395	FMN-linked oxidoreductases
CLD04_RS12070	SSF50249	Nucleic acid-binding proteins
CLD04_RS12075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS12085	SSF141371	PilZ domain-like
CLD04_RS12095	SSF47090	PGBD-like
CLD04_RS12105	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS12110	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12110	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CLD04_RS12120	SSF56300	Metallo-dependent phosphatases
CLD04_RS12130	SSF54106	LysM domain
CLD04_RS12140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS12150	SSF54862	4Fe-4S ferredoxins
CLD04_RS12160	SSF143548	Serine metabolism enzymes domain
CLD04_RS12160	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12160	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CLD04_RS12160	SSF55021	ACT-like
CLD04_RS12165	SSF51569	Aldolase
CLD04_RS12175	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS12175	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS12180	SSF158472	HAMP domain-like
CLD04_RS12180	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS12180	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS12180	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS12185	SSF52172	CheY-like
CLD04_RS12200	SSF52833	Thioredoxin-like
CLD04_RS12205	SSF55120	Pseudouridine synthase
CLD04_RS12205	SSF55174	Alpha-L RNA-binding motif
CLD04_RS12220	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS12230	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS12240	SSF140663	TTHA0068-like
CLD04_RS12245	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS12250	SSF52121	Lumazine synthase
CLD04_RS12255	SSF142695	RibA-like
CLD04_RS12255	SSF55821	YrdC/RibB
CLD04_RS12260	SSF63380	Riboflavin synthase domain-like
CLD04_RS12265	SSF53597	Dihydrofolate reductase-like
CLD04_RS12265	SSF53927	Cytidine deaminase-like
CLD04_RS12275	SSF51306	LexA/Signal peptidase
CLD04_RS12295	SSF50891	Cyclophilin-like
CLD04_RS12310	SSF50621	Alanine racemase C-terminal domain-like
CLD04_RS12310	SSF51419	PLP-binding barrel
CLD04_RS12330	SSF53901	Thiolase-like
CLD04_RS12350	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS12350	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS12355	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS12360	SSF52091	SpoIIaa-like
CLD04_RS12365	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS12365	SSF69189	Penicillin-binding protein associated domain
CLD04_RS12370	SSF53167	Purine and uridine phosphorylases
CLD04_RS12375	SSF143856	DeoB insert domain-like
CLD04_RS12375	SSF53649	Alkaline phosphatase-like
CLD04_RS12380	SSF47823	lambda integrase-like, N-terminal domain
CLD04_RS12380	SSF56349	DNA breaking-rejoining enzymes
CLD04_RS12390	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS12405	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12405	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CLD04_RS12415	SSF48557	L-aspartase-like
CLD04_RS12420	SSF53774	Glutaminase/Asparaginase
CLD04_RS12425	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS12430	SSF47781	RuvA domain 2-like
CLD04_RS12430	SSF89550	PHP domain-like
CLD04_RS12435	SSF55811	Nudix
CLD04_RS12445	SSF51430	NAD(P)-linked oxidoreductase
CLD04_RS12455	SSF53474	alpha/beta-Hydrolases
CLD04_RS12465	SSF89360	HesB-like domain
CLD04_RS12475	SSF54909	Dimeric alpha+beta barrel
CLD04_RS12480	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS12490	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
CLD04_RS12490	SSF56672	DNA/RNA polymerases
CLD04_RS12500	SSF103473	MFS general substrate transporter
CLD04_RS12510	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS12515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS12520	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CLD04_RS12525	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12530	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS12535	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS12535	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12540	SSF53187	Zn-dependent exopeptidases
CLD04_RS12545	SSF51395	FMN-linked oxidoreductases
CLD04_RS12550	SSF53474	alpha/beta-Hydrolases
CLD04_RS12555	SSF57829	Zn-binding ribosomal proteins
CLD04_RS12560	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS12565	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12565	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS12570	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS12570	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12575	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
CLD04_RS12575	SSF56672	DNA/RNA polymerases
CLD04_RS12590	SSF160104	Acetoacetate decarboxylase-like
CLD04_RS12595	SSF53187	Zn-dependent exopeptidases
CLD04_RS12595	SSF55031	Bacterial exopeptidase dimerisation domain
CLD04_RS12605	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS12610	SSF141523	L,D-transpeptidase catalytic domain-like
CLD04_RS12620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS12625	SSF161098	MetI-like
CLD04_RS12630	SSF53850	Periplasmic binding protein-like II
CLD04_RS12640	SSF111331	NAD kinase/diacylglycerol kinase-like
CLD04_RS12645	SSF103473	MFS general substrate transporter
CLD04_RS12650	SSF46955	Putative DNA-binding domain
CLD04_RS12650	SSF55136	Probable bacterial effector-binding domain
CLD04_RS12655	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
CLD04_RS12655	SSF51230	Single hybrid motif
CLD04_RS12655	SSF52777	CoA-dependent acyltransferases
CLD04_RS12660	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS12660	SSF52922	TK C-terminal domain-like
CLD04_RS12665	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS12670	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS12670	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CLD04_RS12675	SSF53067	Actin-like ATPase domain
CLD04_RS12680	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12680	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CLD04_RS12685	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CLD04_RS12690	SSF46689	Homeodomain-like
CLD04_RS12690	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS12690	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS12700	SSF51621	Phosphoenolpyruvate/pyruvate domain
CLD04_RS12705	SSF103378	2-methylcitrate dehydratase PrpD
CLD04_RS12710	SSF48256	Citrate synthase
CLD04_RS12715	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CLD04_RS12715	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CLD04_RS12720	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS12720	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12725	SSF53901	Thiolase-like
CLD04_RS12730	SSF51695	PLC-like phosphodiesterases
CLD04_RS12735	SSF53187	Zn-dependent exopeptidases
CLD04_RS12745	SSF51395	FMN-linked oxidoreductases
CLD04_RS12750	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS12750	SSF52172	CheY-like
CLD04_RS12755	SSF50156	PDZ domain-like
CLD04_RS12755	SSF50494	Trypsin-like serine proteases
CLD04_RS12760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS12765	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS12765	SSF55252	C-terminal domain of arginine repressor
CLD04_RS12770	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS12770	SSF55174	Alpha-L RNA-binding motif
CLD04_RS12775	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS12775	SSF52922	TK C-terminal domain-like
CLD04_RS12780	SSF48576	Terpenoid synthases
CLD04_RS12785	SSF116842	XseB-like
CLD04_RS12795	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS12795	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CLD04_RS12800	SSF48013	NusB-like
CLD04_RS12810	SSF51246	Rudiment single hybrid motif
CLD04_RS12810	SSF52440	PreATP-grasp domain
CLD04_RS12810	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS12815	SSF51230	Single hybrid motif
CLD04_RS12855	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS12865	SSF50104	Translation proteins SH3-like domain
CLD04_RS12865	SSF50249	Nucleic acid-binding proteins
CLD04_RS12870	SSF53092	Creatinase/prolidase N-terminal domain
CLD04_RS12870	SSF55920	Creatinase/aminopeptidase
CLD04_RS12875	SSF52304	Type II 3-dehydroquinate dehydratase
CLD04_RS12895	SSF52151	FabD/lysophospholipase-like
CLD04_RS12900	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS12900	SSF47979	Iron-dependent repressor protein, dimerization domain
CLD04_RS12905	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS12910	SSF52821	Rhodanese/Cell cycle control phosphatase
CLD04_RS12915	SSF53383	PLP-dependent transferases
CLD04_RS12920	SSF53383	PLP-dependent transferases
CLD04_RS12925	SSF101790	Aminomethyltransferase beta-barrel domain
CLD04_RS12925	SSF103025	Folate-binding domain
CLD04_RS12930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS12940	SSF47406	SinR repressor dimerisation domain-like
CLD04_RS12945	SSF47406	SinR repressor dimerisation domain-like
CLD04_RS12945	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS12955	SSF51306	LexA/Signal peptidase
CLD04_RS12990	SSF54523	Pili subunits
CLD04_RS12995	SSF54523	Pili subunits
CLD04_RS13005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS13015	SSF143865	CorA soluble domain-like
CLD04_RS13015	SSF144083	Magnesium transport protein CorA, transmembrane region
CLD04_RS13020	SSF54631	CBS-domain pair
CLD04_RS13020	SSF56176	FAD-binding/transporter-associated domain-like
CLD04_RS13025	SSF52091	SpoIIaa-like
CLD04_RS13035	SSF52833	Thioredoxin-like
CLD04_RS13045	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS13055	SSF89957	MTH1187/YkoF-like
CLD04_RS13060	SSF82171	DPP6 N-terminal domain-like
CLD04_RS13065	SSF53187	Zn-dependent exopeptidases
CLD04_RS13070	SSF53649	Alkaline phosphatase-like
CLD04_RS13075	SSF53067	Actin-like ATPase domain
CLD04_RS13080	SSF158379	YqgQ-like
CLD04_RS13085	SSF144091	Rhomboid-like
CLD04_RS13085	SSF48452	TPR-like
CLD04_RS13095	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS13100	SSF57829	Zn-binding ribosomal proteins
CLD04_RS13105	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS13125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS13130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS13135	SSF161098	MetI-like
CLD04_RS13140	SSF161098	MetI-like
CLD04_RS13145	SSF53850	Periplasmic binding protein-like II
CLD04_RS13150	SSF56519	Penicillin binding protein dimerisation domain
CLD04_RS13150	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS13155	SSF103473	MFS general substrate transporter
CLD04_RS13160	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
CLD04_RS13160	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
CLD04_RS13180	SSF51717	Dihydropteroate synthetase-like
CLD04_RS13180	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CLD04_RS13190	SSF56784	HAD-like
CLD04_RS13195	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS13210	SSF51658	Xylose isomerase-like
CLD04_RS13215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS13235	SSF102705	NIF3 (NGG1p interacting factor 3)-like
CLD04_RS13240	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS13245	SSF46626	Cytochrome c
CLD04_RS13255	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS13255	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS13260	SSF48024	N-terminal domain of DnaB helicase
CLD04_RS13260	SSF56731	DNA primase core
CLD04_RS13260	SSF57783	Zinc beta-ribbon
CLD04_RS13275	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS13275	SSF54631	CBS-domain pair
CLD04_RS13280	SSF109604	HD-domain/PDEase-like
CLD04_RS13285	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS13290	SSF50249	Nucleic acid-binding proteins
CLD04_RS13290	SSF57863	ArfGap/RecO-like zinc finger
CLD04_RS13300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS13300	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CLD04_RS13305	SSF53927	Cytidine deaminase-like
CLD04_RS13315	SSF55486	Metalloproteases ("zincins"), catalytic domain
CLD04_RS13320	SSF109604	HD-domain/PDEase-like
CLD04_RS13325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS13350	SSF141322	NfeD domain-like
CLD04_RS13350	SSF52096	ClpP/crotonase
CLD04_RS13355	SSF89095	GatB/YqeY motif
CLD04_RS13370	SSF102114	Radical SAM enzymes
CLD04_RS13375	SSF75217	alpha/beta knot
CLD04_RS13375	SSF88697	PUA domain-like
CLD04_RS13380	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS13385	SSF46565	Chaperone J-domain
CLD04_RS13385	SSF49493	HSP40/DnaJ peptide-binding domain
CLD04_RS13385	SSF57938	DnaJ/Hsp40 cysteine-rich domain
CLD04_RS13390	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
CLD04_RS13390	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
CLD04_RS13390	SSF53067	Actin-like ATPase domain
CLD04_RS13395	SSF51064	Head domain of nucleotide exchange factor GrpE
CLD04_RS13395	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
CLD04_RS13400	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS13400	SSF55781	GAF domain-like
CLD04_RS13405	SSF102114	Radical SAM enzymes
CLD04_RS13410	SSF50447	Translation proteins
CLD04_RS13410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS13410	SSF54980	EF-G C-terminal domain-like
CLD04_RS13420	SSF53187	Zn-dependent exopeptidases
CLD04_RS13425	SSF53163	HybD-like
CLD04_RS13430	SSF46992	Ribosomal protein S20
CLD04_RS13435	SSF48019	post-AAA+ oligomerization domain-like
CLD04_RS13435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS13445	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS13450	SSF53927	Cytidine deaminase-like
CLD04_RS13455	SSF47781	RuvA domain 2-like
CLD04_RS13460	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS13460	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS13465	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS13470	SSF81301	Nucleotidyltransferase
CLD04_RS13475	SSF109604	HD-domain/PDEase-like
CLD04_RS13480	SSF52374	Nucleotidylyl transferase
CLD04_RS13485	SSF75471	YhbY-like
CLD04_RS13490	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS13490	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CLD04_RS13495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS13500	SSF56784	HAD-like
CLD04_RS13505	SSF100985	Sporulation inhibitor Sda
CLD04_RS13510	SSF52266	SGNH hydrolase
CLD04_RS13525	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS13525	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS13540	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS13540	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS13545	SSF46689	Homeodomain-like
CLD04_RS13545	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS13555	SSF51445	(Trans)glycosidases
CLD04_RS13565	SSF64307	SirA-like
CLD04_RS13580	SSF52821	Rhodanese/Cell cycle control phosphatase
CLD04_RS13580	SSF64307	SirA-like
CLD04_RS13590	SSF75169	DsrEFH-like
CLD04_RS13610	SSF51182	RmlC-like cupins
CLD04_RS13625	SSF46955	Putative DNA-binding domain
CLD04_RS13625	SSF55136	Probable bacterial effector-binding domain
CLD04_RS13630	SSF103473	MFS general substrate transporter
CLD04_RS13635	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS13640	SSF54631	CBS-domain pair
CLD04_RS13640	SSF56176	FAD-binding/transporter-associated domain-like
CLD04_RS13655	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS13655	SSF53850	Periplasmic binding protein-like II
CLD04_RS13660	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS13665	SSF160240	Cation efflux protein cytoplasmic domain-like
CLD04_RS13665	SSF161111	Cation efflux protein transmembrane domain-like
CLD04_RS13670	SSF55331	Tautomerase/MIF
CLD04_RS13675	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS13675	SSF53850	Periplasmic binding protein-like II
CLD04_RS13700	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS13700	SSF54909	Dimeric alpha+beta barrel
CLD04_RS13705	SSF52038	Barstar-related
CLD04_RS13710	SSF48264	Cytochrome P450
CLD04_RS13715	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS13720	SSF52499	Isochorismatase-like hydrolases
CLD04_RS13735	SSF109854	DinB/YfiT-like putative metalloenzymes
CLD04_RS13740	SSF81301	Nucleotidyltransferase
CLD04_RS13740	SSF81631	PAP/OAS1 substrate-binding domain
CLD04_RS13745	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CLD04_RS13760	SSF53681	Aspartate/glutamate racemase
CLD04_RS13775	SSF50814	Lipocalins
CLD04_RS13780	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS13780	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS13785	SSF51430	NAD(P)-linked oxidoreductase
CLD04_RS13795	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS13795	SSF53850	Periplasmic binding protein-like II
CLD04_RS13800	SSF54506	Diaminopimelate epimerase-like
CLD04_RS13810	SSF46689	Homeodomain-like
CLD04_RS13815	SSF53474	alpha/beta-Hydrolases
CLD04_RS13830	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS13845	SSF50129	GroES-like
CLD04_RS13845	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS13860	SSF46955	Putative DNA-binding domain
CLD04_RS13865	SSF50129	GroES-like
CLD04_RS13865	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS13870	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS13875	SSF49899	Concanavalin A-like lectins/glucanases
CLD04_RS13875	SSF75005	Arabinanase/levansucrase/invertase
CLD04_RS13890	SSF52728	PTS IIb component
CLD04_RS13895	SSF53062	PTS system fructose IIA component-like
CLD04_RS13900	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS13900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS13900	SSF53062	PTS system fructose IIA component-like
CLD04_RS13900	SSF63520	PTS-regulatory domain, PRD
CLD04_RS13915	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS13915	SSF56024	Phospholipase D/nuclease
CLD04_RS13920	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS13920	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS13930	SSF52266	SGNH hydrolase
CLD04_RS13940	SSF48264	Cytochrome P450
CLD04_RS13940	SSF52218	Flavoproteins
CLD04_RS13940	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CLD04_RS13940	SSF63380	Riboflavin synthase domain-like
CLD04_RS13945	SSF46689	Homeodomain-like
CLD04_RS13950	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS13970	SSF50692	ADC-like
CLD04_RS13970	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CLD04_RS13970	SSF54292	2Fe-2S ferredoxin-like
CLD04_RS13970	SSF54862	4Fe-4S ferredoxins
CLD04_RS13985	SSF53383	PLP-dependent transferases
CLD04_RS13990	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CLD04_RS13995	SSF53167	Purine and uridine phosphorylases
CLD04_RS14000	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS14015	SSF56519	Penicillin binding protein dimerisation domain
CLD04_RS14015	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS14020	SSF46557	GreA transcript cleavage protein, N-terminal domain
CLD04_RS14020	SSF54534	FKBP-like
CLD04_RS14025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14040	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS14055	SSF53098	Ribonuclease H-like
CLD04_RS14065	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
CLD04_RS14065	SSF50447	Translation proteins
CLD04_RS14065	SSF55186	ThrRS/AlaRS common domain
CLD04_RS14065	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS14075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14080	SSF53850	Periplasmic binding protein-like II
CLD04_RS14085	SSF161098	MetI-like
CLD04_RS14090	SSF161098	MetI-like
CLD04_RS14105	SSF50346	PRC-barrel domain
CLD04_RS14110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14115	SSF81901	HCP-like
CLD04_RS14120	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS14125	SSF53383	PLP-dependent transferases
CLD04_RS14130	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS14135	SSF48019	post-AAA+ oligomerization domain-like
CLD04_RS14135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14140	SSF69572	Activating enzymes of the ubiquitin-like proteins
CLD04_RS14150	SSF50249	Nucleic acid-binding proteins
CLD04_RS14150	SSF55261	GAD domain-like
CLD04_RS14150	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS14155	SSF52954	Class II aaRS ABD-related
CLD04_RS14155	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS14165	SSF53187	Zn-dependent exopeptidases
CLD04_RS14170	SSF69500	DTD-like
CLD04_RS14175	SSF109604	HD-domain/PDEase-like
CLD04_RS14175	SSF55021	ACT-like
CLD04_RS14175	SSF81271	TGS-like
CLD04_RS14175	SSF81301	Nucleotidyltransferase
CLD04_RS14180	SSF53271	PRTase-like
CLD04_RS14185	SSF64182	DHH phosphoesterases
CLD04_RS14195	SSF116726	TrkA C-terminal domain-like
CLD04_RS14200	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CLD04_RS14235	SSF51713	tRNA-guanine transglycosylase
CLD04_RS14240	SSF111337	QueA-like
CLD04_RS14250	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS14250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14255	SSF46929	DNA helicase RuvA subunit, C-terminal domain
CLD04_RS14255	SSF47781	RuvA domain 2-like
CLD04_RS14255	SSF50249	Nucleic acid-binding proteins
CLD04_RS14265	SSF103473	MFS general substrate transporter
CLD04_RS14270	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS14270	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS14295	SSF75625	YebC-like
CLD04_RS14305	SSF54106	LysM domain
CLD04_RS14310	SSF142754	NadA-like
CLD04_RS14315	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
CLD04_RS14315	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
CLD04_RS14320	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
CLD04_RS14320	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS14320	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
CLD04_RS14325	SSF53383	PLP-dependent transferases
CLD04_RS14330	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS14330	SSF75500	Putative transcriptional regulator TM1602, C-terminal domain
CLD04_RS14335	SSF53850	Periplasmic binding protein-like II
CLD04_RS14335	SSF55021	ACT-like
CLD04_RS14340	SSF55021	ACT-like
CLD04_RS14345	SSF102741	Obg GTP-binding protein C-terminal domain
CLD04_RS14345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14345	SSF82051	Obg GTP-binding protein N-terminal domain
CLD04_RS14350	SSF55890	Sporulation response regulatory protein Spo0B
CLD04_RS14355	SSF110324	Ribosomal L27 protein-like
CLD04_RS14360	SSF118010	TM1457-like
CLD04_RS14365	SSF141091	L21p-like
CLD04_RS14375	SSF51261	Duplicated hybrid motif
CLD04_RS14380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14385	SSF63848	Cell-division inhibitor MinC, C-terminal domain
CLD04_RS14400	SSF53067	Actin-like ATPase domain
CLD04_RS14405	SSF102712	JAB1/MPN domain
CLD04_RS14405	SSF47781	RuvA domain 2-like
CLD04_RS14410	SSF52972	ITPase-like
CLD04_RS14415	SSF110997	Sporulation related repeat
CLD04_RS14425	SSF53244	MurD-like peptide ligases, peptide-binding domain
CLD04_RS14425	SSF53623	MurD-like peptide ligases, catalytic domain
CLD04_RS14430	SSF46589	tRNA-binding arm
CLD04_RS14430	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CLD04_RS14430	SSF50677	ValRS/IleRS/LeuRS editing domain
CLD04_RS14430	SSF52374	Nucleotidylyl transferase
CLD04_RS14440	SSF56112	Protein kinase-like (PK-like)
CLD04_RS14445	SSF54106	LysM domain
CLD04_RS14450	SSF53383	PLP-dependent transferases
CLD04_RS14455	SSF51569	Aldolase
CLD04_RS14460	SSF69618	HemD-like
CLD04_RS14465	SSF53850	Periplasmic binding protein-like II
CLD04_RS14465	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
CLD04_RS14475	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS14475	SSF69075	Glutamyl tRNA-reductase dimerization domain
CLD04_RS14475	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
CLD04_RS14485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14490	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS14490	SSF88697	PUA domain-like
CLD04_RS14495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14495	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS14500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14500	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CLD04_RS14505	SSF102735	Trigger factor ribosome-binding domain
CLD04_RS14505	SSF109998	Triger factor/SurA peptide-binding domain-like
CLD04_RS14505	SSF54534	FKBP-like
CLD04_RS14510	SSF116965	Hypothetical protein MPN330
CLD04_RS14510	SSF48452	TPR-like
CLD04_RS14515	SSF52016	LeuD/IlvD-like
CLD04_RS14520	SSF53732	Aconitase iron-sulfur domain
CLD04_RS14525	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CLD04_RS14530	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
CLD04_RS14530	SSF51569	Aldolase
CLD04_RS14535	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS14535	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS14540	SSF55021	ACT-like
CLD04_RS14545	SSF52467	DHS-like NAD/FAD-binding domain
CLD04_RS14545	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS14560	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS14575	SSF56300	Metallo-dependent phosphatases
CLD04_RS14580	SSF52972	ITPase-like
CLD04_RS14585	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS14585	SSF55666	Ribonuclease PH domain 2-like
CLD04_RS14595	SSF53681	Aspartate/glutamate racemase
CLD04_RS14600	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS14605	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS14610	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CLD04_RS14620	SSF46548	alpha-helical ferredoxin
CLD04_RS14620	SSF54292	2Fe-2S ferredoxin-like
CLD04_RS14625	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
CLD04_RS14625	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS14625	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
CLD04_RS14630	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
CLD04_RS14635	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
CLD04_RS14640	SSF53633	Carbamate kinase-like
CLD04_RS14640	SSF55021	ACT-like
CLD04_RS14650	SSF46600	C-terminal UvrC-binding domain of UvrB
CLD04_RS14650	SSF47781	RuvA domain 2-like
CLD04_RS14650	SSF82771	GIY-YIG endonuclease
CLD04_RS14655	SSF52833	Thioredoxin-like
CLD04_RS14660	SSF51011	Glycosyl hydrolase domain
CLD04_RS14660	SSF51445	(Trans)glycosidases
CLD04_RS14665	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS14665	SSF52467	DHS-like NAD/FAD-binding domain
CLD04_RS14670	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS14675	SSF52096	ClpP/crotonase
CLD04_RS14680	SSF46689	Homeodomain-like
CLD04_RS14680	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS14685	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS14695	SSF160443	SMR domain-like
CLD04_RS14695	SSF48334	DNA repair protein MutS, domain III
CLD04_RS14695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14700	SSF47802	DNA polymerase beta, N-terminal domain-like
CLD04_RS14700	SSF81301	Nucleotidyltransferase
CLD04_RS14700	SSF89550	PHP domain-like
CLD04_RS14710	SSF102829	Cell division protein ZapA-like
CLD04_RS14715	SSF53098	Ribonuclease H-like
CLD04_RS14720	SSF46955	Putative DNA-binding domain
CLD04_RS14720	SSF50249	Nucleic acid-binding proteins
CLD04_RS14720	SSF54991	Anticodon-binding domain of PheRS
CLD04_RS14720	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS14720	SSF56037	PheT/TilS domain
CLD04_RS14725	SSF46589	tRNA-binding arm
CLD04_RS14725	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS14735	SSF55315	L30e-like
CLD04_RS14735	SSF75217	alpha/beta knot
CLD04_RS14750	SSF55103	FAD-linked oxidases, C-terminal domain
CLD04_RS14750	SSF56176	FAD-binding/transporter-associated domain-like
CLD04_RS14755	SSF46548	alpha-helical ferredoxin
CLD04_RS14760	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS14775	SSF51011	Glycosyl hydrolase domain
CLD04_RS14775	SSF51445	(Trans)glycosidases
CLD04_RS14780	SSF161098	MetI-like
CLD04_RS14785	SSF161098	MetI-like
CLD04_RS14790	SSF53850	Periplasmic binding protein-like II
CLD04_RS14795	SSF56796	Dehydroquinate synthase-like
CLD04_RS14800	SSF56784	HAD-like
CLD04_RS14805	SSF53639	AraD/HMP-PK domain-like
CLD04_RS14810	SSF53067	Actin-like ATPase domain
CLD04_RS14815	SSF50443	FucI/AraA C-terminal domain-like
CLD04_RS14815	SSF53743	FucI/AraA N-terminal and middle domains
CLD04_RS14825	SSF75005	Arabinanase/levansucrase/invertase
CLD04_RS14830	SSF101821	Aminopeptidase/glucanase lid domain
CLD04_RS14830	SSF53187	Zn-dependent exopeptidases
CLD04_RS14845	SSF74731	Ribosomal protein L20
CLD04_RS14850	SSF143034	L35p-like
CLD04_RS14855	SSF54364	Translation initiation factor IF3, N-terminal domain
CLD04_RS14855	SSF55200	Translation initiation factor IF3, C-terminal domain
CLD04_RS14875	SSF52172	CheY-like
CLD04_RS14880	SSF55781	GAF domain-like
CLD04_RS14880	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS14885	SSF56784	HAD-like
CLD04_RS14890	SSF52954	Class II aaRS ABD-related
CLD04_RS14890	SSF55186	ThrRS/AlaRS common domain
CLD04_RS14890	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS14890	SSF81271	TGS-like
CLD04_RS14905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14920	SSF56276	S-adenosylmethionine decarboxylase
CLD04_RS14925	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS14925	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS14940	SSF51430	NAD(P)-linked oxidoreductase
CLD04_RS14945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS14955	SSF46946	S13-like H2TH domain
CLD04_RS14955	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CLD04_RS14955	SSF81624	N-terminal domain of MutM-like DNA repair proteins
CLD04_RS14960	SSF47807	5' to 3' exonuclease, C-terminal subdomain
CLD04_RS14960	SSF53098	Ribonuclease H-like
CLD04_RS14960	SSF56672	DNA/RNA polymerases
CLD04_RS14960	SSF88723	PIN domain-like
CLD04_RS14965	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS14965	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS14965	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS14970	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS14970	SSF52172	CheY-like
CLD04_RS14975	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS14975	SSF56327	LDH C-terminal domain-like
CLD04_RS14980	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CLD04_RS14985	SSF48256	Citrate synthase
CLD04_RS15005	SSF50800	PK beta-barrel domain-like
CLD04_RS15005	SSF51621	Phosphoenolpyruvate/pyruvate domain
CLD04_RS15005	SSF52009	Phosphohistidine domain
CLD04_RS15005	SSF52935	PK C-terminal domain-like
CLD04_RS15010	SSF53784	Phosphofructokinase
CLD04_RS15015	SSF52096	ClpP/crotonase
CLD04_RS15020	SSF52096	ClpP/crotonase
CLD04_RS15025	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS15025	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CLD04_RS15030	SSF89550	PHP domain-like
CLD04_RS15050	SSF64182	DHH phosphoesterases
CLD04_RS15060	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS15060	SSF54631	CBS-domain pair
CLD04_RS15060	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CLD04_RS15060	SSF75138	HprK N-terminal domain-like
CLD04_RS15075	SSF82114	Riboflavin kinase-like
CLD04_RS15080	SSF51679	Bacterial luciferase-like
CLD04_RS15085	SSF52833	Thioredoxin-like
CLD04_RS15090	SSF51679	Bacterial luciferase-like
CLD04_RS15095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS15100	SSF161098	MetI-like
CLD04_RS15105	SSF161098	MetI-like
CLD04_RS15110	SSF53850	Periplasmic binding protein-like II
CLD04_RS15115	SSF53850	Periplasmic binding protein-like II
CLD04_RS15120	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS15125	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS15125	SSF53850	Periplasmic binding protein-like II
CLD04_RS15130	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS15135	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS15145	SSF48557	L-aspartase-like
CLD04_RS15150	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS15150	SSF69864	Argininosuccinate synthetase, C-terminal domain
CLD04_RS15155	SSF53218	Molybdenum cofactor biosynthesis proteins
CLD04_RS15160	SSF53067	Actin-like ATPase domain
CLD04_RS15165	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS15170	SSF52833	Thioredoxin-like
CLD04_RS15190	SSF52096	ClpP/crotonase
CLD04_RS15195	SSF111331	NAD kinase/diacylglycerol kinase-like
CLD04_RS15200	SSF51338	Composite domain of metallo-dependent hydrolases
CLD04_RS15200	SSF51556	Metallo-dependent hydrolases
CLD04_RS15205	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS15215	SSF143437	THUMP domain-like
CLD04_RS15215	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS15220	SSF53383	PLP-dependent transferases
CLD04_RS15235	SSF89550	PHP domain-like
CLD04_RS15240	SSF46689	Homeodomain-like
CLD04_RS15245	SSF55781	GAF domain-like
CLD04_RS15250	SSF55073	Nucleotide cyclase
CLD04_RS15250	SSF55781	GAF domain-like
CLD04_RS15260	SSF55174	Alpha-L RNA-binding motif
CLD04_RS15270	SSF52374	Nucleotidylyl transferase
CLD04_RS15270	SSF55174	Alpha-L RNA-binding motif
CLD04_RS15280	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS15285	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS15290	SSF54631	CBS-domain pair
CLD04_RS15295	SSF52768	Arginase/deacetylase
CLD04_RS15300	SSF103088	OmpA-like
CLD04_RS15310	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS15310	SSF53822	Periplasmic binding protein-like I
CLD04_RS15315	SSF51569	Aldolase
CLD04_RS15320	SSF52833	Thioredoxin-like
CLD04_RS15330	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS15335	SSF51984	MurCD N-terminal domain
CLD04_RS15335	SSF53244	MurD-like peptide ligases, peptide-binding domain
CLD04_RS15335	SSF53623	MurD-like peptide ligases, catalytic domain
CLD04_RS15340	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS15340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS15345	SSF50249	Nucleic acid-binding proteins
CLD04_RS15355	SSF52833	Thioredoxin-like
CLD04_RS15365	SSF101821	Aminopeptidase/glucanase lid domain
CLD04_RS15365	SSF53187	Zn-dependent exopeptidases
CLD04_RS15375	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS15375	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CLD04_RS15380	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS15385	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS15395	SSF56112	Protein kinase-like (PK-like)
CLD04_RS15400	SSF51445	(Trans)glycosidases
CLD04_RS15400	SSF81296	E set domains
CLD04_RS15405	SSF111331	NAD kinase/diacylglycerol kinase-like
CLD04_RS15415	SSF55144	LigT-like
CLD04_RS15420	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CLD04_RS15430	SSF53187	Zn-dependent exopeptidases
CLD04_RS15430	SSF55031	Bacterial exopeptidase dimerisation domain
CLD04_RS15445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS15450	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS15455	SSF55120	Pseudouridine synthase
CLD04_RS15455	SSF55174	Alpha-L RNA-binding motif
CLD04_RS15465	SSF160996	HI0933 insert domain-like
CLD04_RS15465	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS15485	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS15485	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS15495	SSF48208	Six-hairpin glycosidases
CLD04_RS15500	SSF161098	MetI-like
CLD04_RS15510	SSF53850	Periplasmic binding protein-like II
CLD04_RS15515	SSF161098	MetI-like
CLD04_RS15520	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS15525	SSF48264	Cytochrome P450
CLD04_RS15530	SSF102114	Radical SAM enzymes
CLD04_RS15535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS15540	SSF53383	PLP-dependent transferases
CLD04_RS15545	SSF53383	PLP-dependent transferases
CLD04_RS15555	SSF53474	alpha/beta-Hydrolases
CLD04_RS15560	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS15560	SSF53822	Periplasmic binding protein-like I
CLD04_RS15565	SSF53850	Periplasmic binding protein-like II
CLD04_RS15570	SSF160964	MalF N-terminal region-like
CLD04_RS15570	SSF161098	MetI-like
CLD04_RS15575	SSF161098	MetI-like
CLD04_RS15580	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS15580	SSF56327	LDH C-terminal domain-like
CLD04_RS15585	SSF52821	Rhodanese/Cell cycle control phosphatase
CLD04_RS15590	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CLD04_RS15590	SSF50677	ValRS/IleRS/LeuRS editing domain
CLD04_RS15590	SSF52374	Nucleotidylyl transferase
CLD04_RS15600	SSF52091	SpoIIaa-like
CLD04_RS15600	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS15605	SSF103473	MFS general substrate transporter
CLD04_RS15620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS15625	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS15630	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS15630	SSF52172	CheY-like
CLD04_RS15640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS15655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS15660	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS15670	SSF102114	Radical SAM enzymes
CLD04_RS15675	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS15685	SSF53474	alpha/beta-Hydrolases
CLD04_RS15690	SSF51161	Trimeric LpxA-like enzymes
CLD04_RS15700	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS15700	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CLD04_RS15705	SSF55973	S-adenosylmethionine synthetase
CLD04_RS15710	SSF53795	PEP carboxykinase-like
CLD04_RS15710	SSF68923	PEP carboxykinase N-terminal domain
CLD04_RS15715	SSF88697	PUA domain-like
CLD04_RS15725	SSF53850	Periplasmic binding protein-like II
CLD04_RS15730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS15735	SSF161098	MetI-like
CLD04_RS15740	SSF55811	Nudix
CLD04_RS15750	SSF47240	Ferritin-like
CLD04_RS15765	SSF63411	LuxS/MPP-like metallohydrolase
CLD04_RS15775	SSF53056	beta-carbonic anhydrase, cab
CLD04_RS15780	SSF143800	L28p-like
CLD04_RS15800	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS15805	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS15805	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS15810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS15815	SSF53807	"Helical backbone" metal receptor
CLD04_RS15825	SSF51604	Enolase C-terminal domain-like
CLD04_RS15825	SSF54826	Enolase N-terminal domain-like
CLD04_RS15830	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS15835	SSF52096	ClpP/crotonase
CLD04_RS15840	SSF53474	alpha/beta-Hydrolases
CLD04_RS15845	SSF52467	DHS-like NAD/FAD-binding domain
CLD04_RS15845	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS15850	SSF56322	ADC synthase
CLD04_RS15855	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
CLD04_RS15860	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS15865	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS15865	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS15865	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
CLD04_RS15870	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS15875	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS15885	SSF56112	Protein kinase-like (PK-like)
CLD04_RS15890	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS15895	SSF56112	Protein kinase-like (PK-like)
CLD04_RS15905	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS15910	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS15915	SSF51161	Trimeric LpxA-like enzymes
CLD04_RS15915	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS15920	SSF51161	Trimeric LpxA-like enzymes
CLD04_RS15920	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS15925	SSF51011	Glycosyl hydrolase domain
CLD04_RS15925	SSF51445	(Trans)glycosidases
CLD04_RS15925	SSF81296	E set domains
CLD04_RS16055	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS16060	SSF117892	Band 7/SPFH domain
CLD04_RS16070	SSF109854	DinB/YfiT-like putative metalloenzymes
CLD04_RS16075	SSF50800	PK beta-barrel domain-like
CLD04_RS16080	SSF56796	Dehydroquinate synthase-like
CLD04_RS16085	SSF53720	ALDH-like
CLD04_RS16090	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS16105	SSF116726	TrkA C-terminal domain-like
CLD04_RS16105	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS16120	SSF82057	Prokaryotic SH3-related domain
CLD04_RS16125	SSF103473	MFS general substrate transporter
CLD04_RS16130	SSF51182	RmlC-like cupins
CLD04_RS16150	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS16150	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS16155	SSF51658	Xylose isomerase-like
CLD04_RS16160	SSF54909	Dimeric alpha+beta barrel
CLD04_RS16165	SSF53067	Actin-like ATPase domain
CLD04_RS16170	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS16170	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS16175	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS16175	SSF53639	AraD/HMP-PK domain-like
CLD04_RS16185	SSF103190	Sensory domain-like
CLD04_RS16185	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS16190	SSF103190	Sensory domain-like
CLD04_RS16190	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS16195	SSF103190	Sensory domain-like
CLD04_RS16195	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS16200	SSF103190	Sensory domain-like
CLD04_RS16200	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS16215	SSF111038	YjbQ-like
CLD04_RS16220	SSF51011	Glycosyl hydrolase domain
CLD04_RS16220	SSF51445	(Trans)glycosidases
CLD04_RS16225	SSF54631	CBS-domain pair
CLD04_RS16225	SSF56176	FAD-binding/transporter-associated domain-like
CLD04_RS16245	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS16245	SSF81324	Voltage-gated potassium channels
CLD04_RS16250	SSF160755	YugN-like
CLD04_RS16260	SSF53697	SIS domain
CLD04_RS16265	SSF56796	Dehydroquinate synthase-like
CLD04_RS16270	SSF56796	Dehydroquinate synthase-like
CLD04_RS16280	SSF50249	Nucleic acid-binding proteins
CLD04_RS16285	SSF53383	PLP-dependent transferases
CLD04_RS16290	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS16290	SSF54909	Dimeric alpha+beta barrel
CLD04_RS16295	SSF53474	alpha/beta-Hydrolases
CLD04_RS16300	SSF116922	YugE-like
CLD04_RS16305	SSF53383	PLP-dependent transferases
CLD04_RS16310	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS16310	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS16315	SSF141251	Kinase-associated protein B-like
CLD04_RS16320	SSF53098	Ribonuclease H-like
CLD04_RS16330	SSF103473	MFS general substrate transporter
CLD04_RS16335	SSF53955	Lysozyme-like
CLD04_RS16335	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS16350	SSF103190	Sensory domain-like
CLD04_RS16350	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS16350	SSF55890	Sporulation response regulatory protein Spo0B
CLD04_RS16355	SSF52172	CheY-like
CLD04_RS16360	SSF53822	Periplasmic binding protein-like I
CLD04_RS16365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS16425	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CLD04_RS16430	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS16430	SSF52172	CheY-like
CLD04_RS16445	SSF48576	Terpenoid synthases
CLD04_RS16460	SSF109604	HD-domain/PDEase-like
CLD04_RS16460	SSF141868	EAL domain-like
CLD04_RS16465	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
CLD04_RS16465	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
CLD04_RS16470	SSF52499	Isochorismatase-like hydrolases
CLD04_RS16475	SSF160515	YueI-like
CLD04_RS16505	SSF109604	HD-domain/PDEase-like
CLD04_RS16510	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS16525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS16535	SSF54236	Ubiquitin-like
CLD04_RS16540	SSF140453	EsxAB dimer-like
CLD04_RS16555	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS16555	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CLD04_RS16565	SSF160582	MbtH-like
CLD04_RS16570	SSF47336	ACP-like
CLD04_RS16570	SSF52777	CoA-dependent acyltransferases
CLD04_RS16570	SSF53474	alpha/beta-Hydrolases
CLD04_RS16570	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS16575	SSF47336	ACP-like
CLD04_RS16575	SSF52499	Isochorismatase-like hydrolases
CLD04_RS16580	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS16585	SSF56322	ADC synthase
CLD04_RS16590	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS16595	SSF53474	alpha/beta-Hydrolases
CLD04_RS16600	SSF56524	Oxidoreductase molybdopterin-binding domain
CLD04_RS16615	SSF52949	Macro domain-like
CLD04_RS16615	SSF53187	Zn-dependent exopeptidases
CLD04_RS16625	SSF50685	Barwin-like endoglucanases
CLD04_RS16635	SSF57938	DnaJ/Hsp40 cysteine-rich domain
CLD04_RS16640	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS16645	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS16655	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CLD04_RS16660	SSF50475	FMN-binding split barrel
CLD04_RS16665	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS16670	SSF89360	HesB-like domain
CLD04_RS16675	SSF54506	Diaminopimelate epimerase-like
CLD04_RS16690	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS16695	SSF52833	Thioredoxin-like
CLD04_RS16700	SSF117916	Fe-S cluster assembly (FSCA) domain-like
CLD04_RS16705	SSF53474	alpha/beta-Hydrolases
CLD04_RS16705	SSF82171	DPP6 N-terminal domain-like
CLD04_RS16710	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS16710	SSF55060	GHMP Kinase, C-terminal domain
CLD04_RS16715	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CLD04_RS16720	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS16720	SSF55021	ACT-like
CLD04_RS16720	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS16725	SSF56112	Protein kinase-like (PK-like)
CLD04_RS16730	SSF101307	YutG-like
CLD04_RS16735	SSF56784	HAD-like
CLD04_RS16755	SSF102114	Radical SAM enzymes
CLD04_RS16760	SSF51261	Duplicated hybrid motif
CLD04_RS16770	SSF102891	Hypothetical protein Ta1206
CLD04_RS16775	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
CLD04_RS16775	SSF56300	Metallo-dependent phosphatases
CLD04_RS16785	SSF117396	TM1631-like
CLD04_RS16795	SSF51338	Composite domain of metallo-dependent hydrolases
CLD04_RS16795	SSF51556	Metallo-dependent hydrolases
CLD04_RS16815	SSF158694	UraD-Like
CLD04_RS16815	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CLD04_RS16820	SSF49472	Transthyretin (synonym: prealbumin)
CLD04_RS16830	SSF47741	CO dehydrogenase ISP C-domain like
CLD04_RS16830	SSF54292	2Fe-2S ferredoxin-like
CLD04_RS16835	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
CLD04_RS16835	SSF56003	Molybdenum cofactor-binding domain
CLD04_RS16840	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
CLD04_RS16840	SSF56176	FAD-binding/transporter-associated domain-like
CLD04_RS16845	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS16855	SSF53383	PLP-dependent transferases
CLD04_RS16860	SSF53187	Zn-dependent exopeptidases
CLD04_RS16860	SSF55031	Bacterial exopeptidase dimerisation domain
CLD04_RS16865	SSF54060	His-Me finger endonucleases
CLD04_RS16880	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS16880	SSF53383	PLP-dependent transferases
CLD04_RS16890	SSF56037	PheT/TilS domain
CLD04_RS16895	SSF53383	PLP-dependent transferases
CLD04_RS16905	SSF50331	MOP-like
CLD04_RS16905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS16910	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS16910	SSF64288	Chorismate lyase-like
CLD04_RS16915	SSF53613	Ribokinase-like
CLD04_RS16925	SSF53850	Periplasmic binding protein-like II
CLD04_RS16930	SSF53697	SIS domain
CLD04_RS16935	SSF82771	GIY-YIG endonuclease
CLD04_RS16940	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS16940	SSF54373	FAD-linked reductases, C-terminal domain
CLD04_RS16960	SSF101960	Stabilizer of iron transporter SufD
CLD04_RS16965	SSF82649	SufE/NifU
CLD04_RS16970	SSF53383	PLP-dependent transferases
CLD04_RS16975	SSF101960	Stabilizer of iron transporter SufD
CLD04_RS16980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS16995	SSF69118	AhpD-like
CLD04_RS17000	SSF53850	Periplasmic binding protein-like II
CLD04_RS17005	SSF161098	MetI-like
CLD04_RS17010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS17010	SSF55021	ACT-like
CLD04_RS17015	SSF55718	SCP-like
CLD04_RS17020	SSF52833	Thioredoxin-like
CLD04_RS17025	SSF110455	Toprim domain
CLD04_RS17035	SSF51230	Single hybrid motif
CLD04_RS17040	SSF52833	Thioredoxin-like
CLD04_RS17045	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CLD04_RS17045	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CLD04_RS17050	SSF53901	Thiolase-like
CLD04_RS17055	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS17055	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS17055	SSF52096	ClpP/crotonase
CLD04_RS17065	SSF51730	FAD-linked oxidoreductase
CLD04_RS17080	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17085	SSF103473	MFS general substrate transporter
CLD04_RS17090	SSF55331	Tautomerase/MIF
CLD04_RS17095	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS17100	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17100	SSF53850	Periplasmic binding protein-like II
CLD04_RS17110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS17120	SSF55486	Metalloproteases ("zincins"), catalytic domain
CLD04_RS17125	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS17130	SSF47240	Ferritin-like
CLD04_RS17135	SSF50156	PDZ domain-like
CLD04_RS17135	SSF50494	Trypsin-like serine proteases
CLD04_RS17140	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS17140	SSF52172	CheY-like
CLD04_RS17145	SSF158472	HAMP domain-like
CLD04_RS17145	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS17145	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS17155	SSF46689	Homeodomain-like
CLD04_RS17160	SSF48557	L-aspartase-like
CLD04_RS17185	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS17185	SSF52172	CheY-like
CLD04_RS17190	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS17215	SSF103473	MFS general substrate transporter
CLD04_RS17220	SSF89028	Cobalamin adenosyltransferase-like
CLD04_RS17225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS17230	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS17235	SSF53807	"Helical backbone" metal receptor
CLD04_RS17240	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS17245	SSF63829	Calcium-dependent phosphotriesterase
CLD04_RS17250	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS17250	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS17255	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS17255	SSF52172	CheY-like
CLD04_RS17265	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS17275	SSF51182	RmlC-like cupins
CLD04_RS17290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS17295	SSF111369	HlyD-like secretion proteins
CLD04_RS17300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS17305	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS17310	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CLD04_RS17315	SSF53807	"Helical backbone" metal receptor
CLD04_RS17345	SSF53649	Alkaline phosphatase-like
CLD04_RS17350	SSF46955	Putative DNA-binding domain
CLD04_RS17350	SSF53850	Periplasmic binding protein-like II
CLD04_RS17355	SSF53850	Periplasmic binding protein-like II
CLD04_RS17360	SSF161098	MetI-like
CLD04_RS17365	SSF51430	NAD(P)-linked oxidoreductase
CLD04_RS17380	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
CLD04_RS17380	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CLD04_RS17385	SSF52218	Flavoproteins
CLD04_RS17385	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CLD04_RS17385	SSF63380	Riboflavin synthase domain-like
CLD04_RS17390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS17400	SSF158442	DsbB-like
CLD04_RS17405	SSF52833	Thioredoxin-like
CLD04_RS17410	SSF55008	HMA, heavy metal-associated domain
CLD04_RS17410	SSF56784	HAD-like
CLD04_RS17410	SSF81653	Calcium ATPase, transduction domain A
CLD04_RS17410	SSF81665	Calcium ATPase, transmembrane domain M
CLD04_RS17415	SSF55008	HMA, heavy metal-associated domain
CLD04_RS17415	SSF56784	HAD-like
CLD04_RS17415	SSF81653	Calcium ATPase, transduction domain A
CLD04_RS17415	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
CLD04_RS17415	SSF81665	Calcium ATPase, transmembrane domain M
CLD04_RS17420	SSF55008	HMA, heavy metal-associated domain
CLD04_RS17430	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS17435	SSF52218	Flavoproteins
CLD04_RS17450	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS17455	SSF46689	Homeodomain-like
CLD04_RS17455	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS17460	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS17470	SSF74982	Small protein B (SmpB)
CLD04_RS17475	SSF50249	Nucleic acid-binding proteins
CLD04_RS17480	SSF53474	alpha/beta-Hydrolases
CLD04_RS17490	SSF53474	alpha/beta-Hydrolases
CLD04_RS17495	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS17500	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS17505	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS17510	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17515	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CLD04_RS17520	SSF161098	MetI-like
CLD04_RS17525	SSF53850	Periplasmic binding protein-like II
CLD04_RS17530	SSF161098	MetI-like
CLD04_RS17535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS17535	SSF54631	CBS-domain pair
CLD04_RS17540	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17565	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17570	SSF161098	MetI-like
CLD04_RS17575	SSF53850	Periplasmic binding protein-like II
CLD04_RS17580	SSF161098	MetI-like
CLD04_RS17585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS17585	SSF54631	CBS-domain pair
CLD04_RS17590	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17600	SSF50729	PH domain-like
CLD04_RS17615	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS17620	SSF51604	Enolase C-terminal domain-like
CLD04_RS17620	SSF54826	Enolase N-terminal domain-like
CLD04_RS17625	SSF53649	Alkaline phosphatase-like
CLD04_RS17625	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
CLD04_RS17630	SSF51351	Triosephosphate isomerase (TIM)
CLD04_RS17635	SSF53748	Phosphoglycerate kinase
CLD04_RS17640	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS17640	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS17645	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS17645	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17650	SSF103473	MFS general substrate transporter
CLD04_RS17655	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17655	SSF53822	Periplasmic binding protein-like I
CLD04_RS17660	SSF51679	Bacterial luciferase-like
CLD04_RS17670	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17670	SSF53850	Periplasmic binding protein-like II
CLD04_RS17675	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS17685	SSF51445	(Trans)glycosidases
CLD04_RS17690	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS17695	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS17695	SSF46548	alpha-helical ferredoxin
CLD04_RS17710	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17715	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS17715	SSF52172	CheY-like
CLD04_RS17725	SSF52172	CheY-like
CLD04_RS17730	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS17740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS17745	SSF53474	alpha/beta-Hydrolases
CLD04_RS17750	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS17750	SSF81606	PP2C-like
CLD04_RS17755	SSF51445	(Trans)glycosidases
CLD04_RS17760	SSF51445	(Trans)glycosidases
CLD04_RS17760	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS17765	SSF161098	MetI-like
CLD04_RS17770	SSF160964	MalF N-terminal region-like
CLD04_RS17770	SSF161098	MetI-like
CLD04_RS17775	SSF53850	Periplasmic binding protein-like II
CLD04_RS17780	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS17780	SSF53822	Periplasmic binding protein-like I
CLD04_RS17785	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS17785	SSF48008	GntR ligand-binding domain-like
CLD04_RS17810	SSF53383	PLP-dependent transferases
CLD04_RS17815	SSF51161	Trimeric LpxA-like enzymes
CLD04_RS17830	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS17840	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS17850	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS17855	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS17860	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS17865	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS17865	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS17870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS17880	SSF47406	SinR repressor dimerisation domain-like
CLD04_RS17880	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS17885	SSF53474	alpha/beta-Hydrolases
CLD04_RS17895	SSF50814	Lipocalins
CLD04_RS17905	SSF53681	Aspartate/glutamate racemase
CLD04_RS17910	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS17915	SSF75005	Arabinanase/levansucrase/invertase
CLD04_RS17920	SSF49899	Concanavalin A-like lectins/glucanases
CLD04_RS17920	SSF75005	Arabinanase/levansucrase/invertase
CLD04_RS17930	SSF46689	Homeodomain-like
CLD04_RS17930	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS17935	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS17940	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS17955	SSF52096	ClpP/crotonase
CLD04_RS17960	SSF56784	HAD-like
CLD04_RS17965	SSF51011	Glycosyl hydrolase domain
CLD04_RS17965	SSF51445	(Trans)glycosidases
CLD04_RS17970	SSF48208	Six-hairpin glycosidases
CLD04_RS17970	SSF74650	Galactose mutarotase-like
CLD04_RS17980	SSF161098	MetI-like
CLD04_RS17985	SSF160964	MalF N-terminal region-like
CLD04_RS17985	SSF161098	MetI-like
CLD04_RS17990	SSF53850	Periplasmic binding protein-like II
CLD04_RS17995	SSF51445	(Trans)glycosidases
CLD04_RS18000	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS18000	SSF53822	Periplasmic binding protein-like I
CLD04_RS18005	SSF102405	MCP/YpsA-like
CLD04_RS18010	SSF101386	all-alpha NTP pyrophosphatases
CLD04_RS18015	SSF52091	SpoIIaa-like
CLD04_RS18020	SSF53056	beta-carbonic anhydrase, cab
CLD04_RS18025	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS18025	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CLD04_RS18035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18040	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS18045	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS18045	SSF52172	CheY-like
CLD04_RS18055	SSF54001	Cysteine proteinases
CLD04_RS18060	SSF55594	HPr-like
CLD04_RS18065	SSF55608	Homing endonucleases
CLD04_RS18070	SSF142338	CofD-like
CLD04_RS18075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18080	SSF55811	Nudix
CLD04_RS18085	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS18090	SSF54001	Cysteine proteinases
CLD04_RS18095	SSF48452	TPR-like
CLD04_RS18100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18100	SSF90123	ABC transporter transmembrane region
CLD04_RS18120	SSF101386	all-alpha NTP pyrophosphatases
CLD04_RS18120	SSF141734	HisI-like
CLD04_RS18125	SSF51366	Ribulose-phoshate binding barrel
CLD04_RS18130	SSF51366	Ribulose-phoshate binding barrel
CLD04_RS18135	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS18140	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS18145	SSF53720	ALDH-like
CLD04_RS18150	SSF53850	Periplasmic binding protein-like II
CLD04_RS18155	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS18165	SSF51126	Pectin lyase-like
CLD04_RS18170	SSF51161	Trimeric LpxA-like enzymes
CLD04_RS18175	SSF56784	HAD-like
CLD04_RS18190	SSF53795	PEP carboxykinase-like
CLD04_RS18190	SSF75138	HprK N-terminal domain-like
CLD04_RS18195	SSF51338	Composite domain of metallo-dependent hydrolases
CLD04_RS18195	SSF51556	Metallo-dependent hydrolases
CLD04_RS18200	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS18205	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS18205	SSF64288	Chorismate lyase-like
CLD04_RS18210	SSF56300	Metallo-dependent phosphatases
CLD04_RS18210	SSF74853	Lamin A/C globular tail domain
CLD04_RS18240	SSF64518	Phase 1 flagellin
CLD04_RS18245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18250	SSF46600	C-terminal UvrC-binding domain of UvrB
CLD04_RS18250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18260	SSF52009	Phosphohistidine domain
CLD04_RS18260	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS18265	SSF46689	Homeodomain-like
CLD04_RS18270	SSF103473	MFS general substrate transporter
CLD04_RS18275	SSF50156	PDZ domain-like
CLD04_RS18285	SSF47090	PGBD-like
CLD04_RS18285	SSF50156	PDZ domain-like
CLD04_RS18285	SSF52096	ClpP/crotonase
CLD04_RS18295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18300	SSF46626	Cytochrome c
CLD04_RS18315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18315	SSF81767	Pre-protein crosslinking domain of SecA
CLD04_RS18315	SSF81886	Helical scaffold and wing domains of SecA
CLD04_RS18325	SSF69754	Ribosome binding protein Y (YfiA homologue)
CLD04_RS18340	SSF101116	Flagellar export chaperone FliS
CLD04_RS18350	SSF160214	FlaG-like
CLD04_RS18360	SSF64518	Phase 1 flagellin
CLD04_RS18365	SSF117130	CsrA-like
CLD04_RS18370	SSF141457	BH3618-like
CLD04_RS18380	SSF64518	Phase 1 flagellin
CLD04_RS18385	SSF64518	Phase 1 flagellin
CLD04_RS18390	SSF140566	FlgN-like
CLD04_RS18395	SSF101498	Anti-sigma factor FlgM
CLD04_RS18405	SSF53271	PRTase-like
CLD04_RS18415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18420	SSF82549	DAK1/DegV-like
CLD04_RS18425	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS18425	SSF52172	CheY-like
CLD04_RS18430	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS18435	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS18435	SSF54980	EF-G C-terminal domain-like
CLD04_RS18450	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS18455	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS18470	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS18470	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS18470	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
CLD04_RS18475	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS18490	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS18495	SSF53187	Zn-dependent exopeptidases
CLD04_RS18515	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS18520	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS18525	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS18535	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS18540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18560	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS18560	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS18570	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS18575	SSF52374	Nucleotidylyl transferase
CLD04_RS18585	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS18590	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS18595	SSF50129	GroES-like
CLD04_RS18595	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS18600	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS18605	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS18615	SSF51182	RmlC-like cupins
CLD04_RS18635	SSF103473	MFS general substrate transporter
CLD04_RS18645	SSF56784	HAD-like
CLD04_RS18655	SSF54001	Cysteine proteinases
CLD04_RS18665	SSF56300	Metallo-dependent phosphatases
CLD04_RS18675	SSF53623	MurD-like peptide ligases, catalytic domain
CLD04_RS18680	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS18680	SSF53822	Periplasmic binding protein-like I
CLD04_RS18685	SSF53613	Ribokinase-like
CLD04_RS18690	SSF102546	RbsD-like
CLD04_RS18695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18705	SSF53822	Periplasmic binding protein-like I
CLD04_RS18710	SSF50044	SH3-domain
CLD04_RS18720	SSF52218	Flavoproteins
CLD04_RS18725	SSF117856	AF0104/ALDC/Ptd012-like
CLD04_RS18730	SSF52467	DHS-like NAD/FAD-binding domain
CLD04_RS18730	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS18735	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS18735	SSF53850	Periplasmic binding protein-like II
CLD04_RS18765	SSF50475	FMN-binding split barrel
CLD04_RS18775	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CLD04_RS18780	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS18780	SSF54909	Dimeric alpha+beta barrel
CLD04_RS18845	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS18845	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS18845	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
CLD04_RS18850	SSF89550	PHP domain-like
CLD04_RS18855	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS18885	SSF56784	HAD-like
CLD04_RS18890	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS18890	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS18895	SSF50249	Nucleic acid-binding proteins
CLD04_RS18910	SSF63817	Sortase
CLD04_RS18915	SSF52172	CheY-like
CLD04_RS18915	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS18920	SSF81330	Gated mechanosensitive channel
CLD04_RS18925	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CLD04_RS18930	SSF48452	TPR-like
CLD04_RS18935	SSF117143	Flagellar hook protein flgE
CLD04_RS18940	SSF117143	Flagellar hook protein flgE
CLD04_RS18945	SSF53067	Actin-like ATPase domain
CLD04_RS18960	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS18965	SSF103473	MFS general substrate transporter
CLD04_RS18970	SSF51126	Pectin lyase-like
CLD04_RS18980	SSF103473	MFS general substrate transporter
CLD04_RS18985	SSF52499	Isochorismatase-like hydrolases
CLD04_RS18995	SSF111352	Ammonium transporter
CLD04_RS19000	SSF54913	GlnB-like
CLD04_RS19005	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
CLD04_RS19015	SSF51261	Duplicated hybrid motif
CLD04_RS19020	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS19035	SSF56024	Phospholipase D/nuclease
CLD04_RS19040	SSF46955	Putative DNA-binding domain
CLD04_RS19040	SSF89082	Antibiotic binding domain of TipA-like multidrug resistance regulators
CLD04_RS19050	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS19055	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS19060	SSF51338	Composite domain of metallo-dependent hydrolases
CLD04_RS19060	SSF51556	Metallo-dependent hydrolases
CLD04_RS19065	SSF51278	Urease, beta-subunit
CLD04_RS19070	SSF54111	Urease, gamma-subunit
CLD04_RS19075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS19080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS19095	SSF53822	Periplasmic binding protein-like I
CLD04_RS19100	SSF69047	Hypothetical protein YjbJ
CLD04_RS19110	SSF48452	TPR-like
CLD04_RS19120	SSF102114	Radical SAM enzymes
CLD04_RS19125	SSF53927	Cytidine deaminase-like
CLD04_RS19135	SSF53300	vWA-like
CLD04_RS19145	SSF53300	vWA-like
CLD04_RS19155	SSF55205	EPT/RTPC-like
CLD04_RS19160	SSF143842	YwmB-like
CLD04_RS19175	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
CLD04_RS19175	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
CLD04_RS19180	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
CLD04_RS19180	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
CLD04_RS19180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS19185	SSF52943	ATP synthase (F1-ATPase), gamma subunit
CLD04_RS19190	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
CLD04_RS19190	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
CLD04_RS19190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS19195	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
CLD04_RS19200	SSF81573	F1F0 ATP synthase subunit B, membrane domain
CLD04_RS19205	SSF81333	F1F0 ATP synthase subunit C
CLD04_RS19210	SSF81336	F1F0 ATP synthase subunit A
CLD04_RS19220	SSF53271	PRTase-like
CLD04_RS19225	SSF53383	PLP-dependent transferases
CLD04_RS19230	SSF110710	TTHA0583/YokD-like
CLD04_RS19235	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
CLD04_RS19240	SSF52788	Phosphotyrosine protein phosphatases I
CLD04_RS19250	SSF55821	YrdC/RibB
CLD04_RS19255	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS19275	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS19280	SSF75620	Release factor
CLD04_RS19285	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS19290	SSF46955	Putative DNA-binding domain
CLD04_RS19300	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS19300	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CLD04_RS19305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS19305	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CLD04_RS19310	SSF143800	L28p-like
CLD04_RS19315	SSF50249	Nucleic acid-binding proteins
CLD04_RS19315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS19315	SSF68912	Rho N-terminal domain-like
CLD04_RS19320	SSF56655	Carbohydrate phosphatase
CLD04_RS19325	SSF55205	EPT/RTPC-like
CLD04_RS19330	SSF51569	Aldolase
CLD04_RS19335	SSF51569	Aldolase
CLD04_RS19340	SSF52172	CheY-like
CLD04_RS19345	SSF53697	SIS domain
CLD04_RS19350	SSF53098	Ribonuclease H-like
CLD04_RS19355	SSF53098	Ribonuclease H-like
CLD04_RS19360	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS19360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS19370	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CLD04_RS19370	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CLD04_RS19375	SSF103501	Respiratory nitrate reductase 1 gamma chain
CLD04_RS19375	SSF46548	alpha-helical ferredoxin
CLD04_RS19380	SSF56024	Phospholipase D/nuclease
CLD04_RS19385	SSF51658	Xylose isomerase-like
CLD04_RS19395	SSF53597	Dihydrofolate reductase-like
CLD04_RS19400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS19400	SSF90123	ABC transporter transmembrane region
CLD04_RS19405	SSF56024	Phospholipase D/nuclease
CLD04_RS19420	SSF103501	Respiratory nitrate reductase 1 gamma chain
CLD04_RS19425	SSF89155	TorD-like
CLD04_RS19430	SSF54862	4Fe-4S ferredoxins
CLD04_RS19435	SSF50692	ADC-like
CLD04_RS19435	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CLD04_RS19440	SSF51206	cAMP-binding domain-like
CLD04_RS19450	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS19450	SSF51206	cAMP-binding domain-like
CLD04_RS19455	SSF103473	MFS general substrate transporter
CLD04_RS19460	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CLD04_RS19460	SSF52374	Nucleotidylyl transferase
CLD04_RS19460	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
CLD04_RS19465	SSF50814	Lipocalins
CLD04_RS19480	SSF102114	Radical SAM enzymes
CLD04_RS19490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS19500	SSF63411	LuxS/MPP-like metallohydrolase
CLD04_RS19505	SSF63411	LuxS/MPP-like metallohydrolase
CLD04_RS19515	SSF50974	Nitrous oxide reductase, N-terminal domain
CLD04_RS19520	SSF50974	Nitrous oxide reductase, N-terminal domain
CLD04_RS19530	SSF48452	TPR-like
CLD04_RS19545	SSF52768	Arginase/deacetylase
CLD04_RS19550	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS19555	SSF53955	Lysozyme-like
CLD04_RS19555	SSF56601	beta-lactamase/transpeptidase-like
CLD04_RS19575	SSF55331	Tautomerase/MIF
CLD04_RS19580	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS19585	SSF52954	Class II aaRS ABD-related
CLD04_RS19585	SSF55186	ThrRS/AlaRS common domain
CLD04_RS19585	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS19585	SSF81271	TGS-like
CLD04_RS19590	SSF103473	MFS general substrate transporter
CLD04_RS19595	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS19605	SSF109604	HD-domain/PDEase-like
CLD04_RS19620	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS19625	SSF55681	Class II aaRS and biotin synthetases
CLD04_RS19630	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS19630	SSF53850	Periplasmic binding protein-like II
CLD04_RS19635	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CLD04_RS19640	SSF54909	Dimeric alpha+beta barrel
CLD04_RS19650	SSF53383	PLP-dependent transferases
CLD04_RS19655	SSF103473	MFS general substrate transporter
CLD04_RS19660	SSF56059	Glutathione synthetase ATP-binding domain-like
CLD04_RS19665	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS19675	SSF53850	Periplasmic binding protein-like II
CLD04_RS19680	SSF103473	MFS general substrate transporter
CLD04_RS19690	SSF53187	Zn-dependent exopeptidases
CLD04_RS19695	SSF53720	ALDH-like
CLD04_RS19700	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS19700	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CLD04_RS19710	SSF51182	RmlC-like cupins
CLD04_RS19715	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS19720	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS19725	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS19730	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS19735	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS19740	SSF51269	AFP III-like domain
CLD04_RS19740	SSF51569	Aldolase
CLD04_RS19745	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS19750	SSF53383	PLP-dependent transferases
CLD04_RS19755	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CLD04_RS19760	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS19790	SSF53720	ALDH-like
CLD04_RS19795	SSF52141	Uracil-DNA glycosylase-like
CLD04_RS19800	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS19815	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS19820	SSF53613	Ribokinase-like
CLD04_RS19830	SSF49899	Concanavalin A-like lectins/glucanases
CLD04_RS19830	SSF75005	Arabinanase/levansucrase/invertase
CLD04_RS19835	SSF55604	Glucose permease domain IIB
CLD04_RS19845	SSF50151	SacY-like RNA-binding domain
CLD04_RS19845	SSF63520	PTS-regulatory domain, PRD
CLD04_RS19855	SSF52025	PA domain
CLD04_RS19855	SSF52743	Subtilisin-like
CLD04_RS19860	SSF51679	Bacterial luciferase-like
CLD04_RS19865	SSF55469	FMN-dependent nitroreductase-like
CLD04_RS19885	SSF81452	Cytochrome c oxidase subunit III-like
CLD04_RS19890	SSF81442	Cytochrome c oxidase subunit I-like
CLD04_RS19895	SSF49503	Cupredoxins
CLD04_RS19895	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
CLD04_RS19910	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS19910	SSF55060	GHMP Kinase, C-terminal domain
CLD04_RS19920	SSF46689	Homeodomain-like
CLD04_RS19925	SSF47406	SinR repressor dimerisation domain-like
CLD04_RS19940	SSF52833	Thioredoxin-like
CLD04_RS19945	SSF54909	Dimeric alpha+beta barrel
CLD04_RS19965	SSF51391	Thiamin phosphate synthase
CLD04_RS19970	SSF53613	Ribokinase-like
CLD04_RS19975	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS19975	SSF53850	Periplasmic binding protein-like II
CLD04_RS19990	SSF103473	MFS general substrate transporter
CLD04_RS20000	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS20000	SSF88697	PUA domain-like
CLD04_RS20005	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS20015	SSF52743	Subtilisin-like
CLD04_RS20015	SSF54897	Protease propeptides/inhibitors
CLD04_RS20020	SSF55604	Glucose permease domain IIB
CLD04_RS20025	SSF50151	SacY-like RNA-binding domain
CLD04_RS20025	SSF63520	PTS-regulatory domain, PRD
CLD04_RS20030	SSF53448	Nucleotide-diphospho-sugar transferases
CLD04_RS20040	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS20050	SSF52025	PA domain
CLD04_RS20050	SSF53187	Zn-dependent exopeptidases
CLD04_RS20055	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS20060	SSF69118	AhpD-like
CLD04_RS20065	SSF103473	MFS general substrate transporter
CLD04_RS20070	SSF81301	Nucleotidyltransferase
CLD04_RS20075	SSF46689	Homeodomain-like
CLD04_RS20080	SSF53098	Ribonuclease H-like
CLD04_RS20100	SSF56801	Acetyl-CoA synthetase-like
CLD04_RS20110	SSF47336	ACP-like
CLD04_RS20115	SSF52266	SGNH hydrolase
CLD04_RS20120	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS20125	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
CLD04_RS20130	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS20130	SSF56327	LDH C-terminal domain-like
CLD04_RS20135	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
CLD04_RS20145	SSF52794	PTS system IIB component-like
CLD04_RS20150	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS20150	SSF52794	PTS system IIB component-like
CLD04_RS20150	SSF55804	Phoshotransferase/anion transport protein
CLD04_RS20150	SSF63520	PTS-regulatory domain, PRD
CLD04_RS20160	SSF50486	FMT C-terminal domain-like
CLD04_RS20165	SSF56634	Heme-dependent catalase-like
CLD04_RS20170	SSF103473	MFS general substrate transporter
CLD04_RS20180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS20200	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS20200	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CLD04_RS20210	SSF53613	Ribokinase-like
CLD04_RS20215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS20215	SSF90123	ABC transporter transmembrane region
CLD04_RS20220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS20220	SSF90123	ABC transporter transmembrane region
CLD04_RS20250	SSF88713	Glycoside hydrolase/deacetylase
CLD04_RS20255	SSF50331	MOP-like
CLD04_RS20255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS20265	SSF53720	ALDH-like
CLD04_RS20280	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS20290	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS20295	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS20295	SSF52172	CheY-like
CLD04_RS20300	SSF53187	Zn-dependent exopeptidases
CLD04_RS20300	SSF55031	Bacterial exopeptidase dimerisation domain
CLD04_RS20310	SSF54518	Tubby C-terminal domain-like
CLD04_RS20315	SSF51726	UROD/MetE-like
CLD04_RS20320	SSF51726	UROD/MetE-like
CLD04_RS20330	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS20335	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS20345	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS20355	SSF56024	Phospholipase D/nuclease
CLD04_RS20380	SSF53901	Thiolase-like
CLD04_RS20400	SSF47240	Ferritin-like
CLD04_RS20420	SSF53098	Ribonuclease H-like
CLD04_RS20430	SSF46689	Homeodomain-like
CLD04_RS20440	SSF53187	Zn-dependent exopeptidases
CLD04_RS20475	SSF52317	Class I glutamine amidotransferase-like
CLD04_RS20475	SSF56634	Heme-dependent catalase-like
CLD04_RS20505	SSF103473	MFS general substrate transporter
CLD04_RS20510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS20515	SSF49785	Galactose-binding domain-like
CLD04_RS20515	SSF52266	SGNH hydrolase
CLD04_RS20545	SSF63829	Calcium-dependent phosphotriesterase
CLD04_RS20570	SSF49785	Galactose-binding domain-like
CLD04_RS20575	SSF103481	Multidrug resistance efflux transporter EmrE
CLD04_RS20580	SSF52402	Adenine nucleotide alpha hydrolases-like
CLD04_RS20585	SSF51445	(Trans)glycosidases
CLD04_RS20590	SSF51261	Duplicated hybrid motif
CLD04_RS20590	SSF55604	Glucose permease domain IIB
CLD04_RS20615	SSF52980	Restriction endonuclease-like
CLD04_RS20620	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS20630	SSF75005	Arabinanase/levansucrase/invertase
CLD04_RS20635	SSF111326	Urocanase
CLD04_RS20640	SSF51338	Composite domain of metallo-dependent hydrolases
CLD04_RS20640	SSF51556	Metallo-dependent hydrolases
CLD04_RS20645	SSF52768	Arginase/deacetylase
CLD04_RS20655	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
CLD04_RS20655	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
CLD04_RS20655	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
CLD04_RS20665	SSF51569	Aldolase
CLD04_RS20670	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS20670	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CLD04_RS20685	SSF103378	2-methylcitrate dehydratase PrpD
CLD04_RS20690	SSF53187	Zn-dependent exopeptidases
CLD04_RS20690	SSF55031	Bacterial exopeptidase dimerisation domain
CLD04_RS20695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS20700	SSF161098	MetI-like
CLD04_RS20705	SSF53850	Periplasmic binding protein-like II
CLD04_RS20710	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS20715	SSF51679	Bacterial luciferase-like
CLD04_RS20720	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CLD04_RS20725	SSF56784	HAD-like
CLD04_RS20735	SSF50814	Lipocalins
CLD04_RS20755	SSF53807	"Helical backbone" metal receptor
CLD04_RS20760	SSF159121	BC4932-like
CLD04_RS20770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS20775	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS20780	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS20780	SSF52172	CheY-like
CLD04_RS20785	SSF51569	Aldolase
CLD04_RS20790	SSF51658	Xylose isomerase-like
CLD04_RS20795	SSF51658	Xylose isomerase-like
CLD04_RS20800	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS20800	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CLD04_RS20805	SSF103473	MFS general substrate transporter
CLD04_RS20810	SSF51658	Xylose isomerase-like
CLD04_RS20815	SSF52467	DHS-like NAD/FAD-binding domain
CLD04_RS20815	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CLD04_RS20820	SSF53613	Ribokinase-like
CLD04_RS20825	SSF51182	RmlC-like cupins
CLD04_RS20830	SSF53720	ALDH-like
CLD04_RS20835	SSF100950	NagB/RpiA/CoA transferase-like
CLD04_RS20835	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS20840	SSF51430	NAD(P)-linked oxidoreductase
CLD04_RS20855	SSF103473	MFS general substrate transporter
CLD04_RS20860	SSF110942	HSP90 C-terminal domain
CLD04_RS20860	SSF54211	Ribosomal protein S5 domain 2-like
CLD04_RS20860	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS20875	SSF46689	Homeodomain-like
CLD04_RS20880	SSF53720	ALDH-like
CLD04_RS20890	SSF50998	Quinoprotein alcohol dehydrogenase-like
CLD04_RS20910	SSF51182	RmlC-like cupins
CLD04_RS20915	SSF46689	Homeodomain-like
CLD04_RS20915	SSF48498	Tetracyclin repressor-like, C-terminal domain
CLD04_RS20920	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS20925	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS20950	SSF110738	Glycerate kinase I
CLD04_RS20955	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS20955	SSF48008	GntR ligand-binding domain-like
CLD04_RS20960	SSF53067	Actin-like ATPase domain
CLD04_RS20970	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CLD04_RS20970	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS20975	SSF52833	Thioredoxin-like
CLD04_RS20980	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS20980	SSF52833	Thioredoxin-like
CLD04_RS20985	SSF51445	(Trans)glycosidases
CLD04_RS21000	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS21000	SSF64288	Chorismate lyase-like
CLD04_RS21015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS21020	SSF56300	Metallo-dependent phosphatases
CLD04_RS21035	SSF75217	alpha/beta knot
CLD04_RS21050	SSF50129	GroES-like
CLD04_RS21050	SSF51735	NAD(P)-binding Rossmann-fold domains
CLD04_RS21065	SSF50998	Quinoprotein alcohol dehydrogenase-like
CLD04_RS21070	SSF54001	Cysteine proteinases
CLD04_RS21075	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS21080	SSF48452	TPR-like
CLD04_RS21090	SSF52768	Arginase/deacetylase
CLD04_RS21100	SSF53383	PLP-dependent transferases
CLD04_RS21105	SSF46689	Homeodomain-like
CLD04_RS21105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS21105	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS21110	SSF158472	HAMP domain-like
CLD04_RS21110	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS21110	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS21115	SSF52172	CheY-like
CLD04_RS21130	SSF50156	PDZ domain-like
CLD04_RS21130	SSF50494	Trypsin-like serine proteases
CLD04_RS21135	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS21150	SSF158472	HAMP domain-like
CLD04_RS21150	SSF47384	Homodimeric domain of signal transducing histidine kinase
CLD04_RS21150	SSF55785	PYP-like sensor domain (PAS domain)
CLD04_RS21150	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CLD04_RS21155	SSF46894	C-terminal effector domain of the bipartite response regulators
CLD04_RS21155	SSF52172	CheY-like
CLD04_RS21180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS21185	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS21190	SSF48024	N-terminal domain of DnaB helicase
CLD04_RS21190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS21210	SSF103473	MFS general substrate transporter
CLD04_RS21220	SSF55653	Ribosomal protein L9 C-domain
CLD04_RS21220	SSF55658	L9 N-domain-like
CLD04_RS21225	SSF64182	DHH phosphoesterases
CLD04_RS21245	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS21250	SSF64182	DHH phosphoesterases
CLD04_RS21265	SSF103473	MFS general substrate transporter
CLD04_RS21285	SSF54427	NTF2-like
CLD04_RS21290	SSF141571	Pentapeptide repeat-like
CLD04_RS21295	SSF103473	MFS general substrate transporter
CLD04_RS21300	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS21300	SSF53850	Periplasmic binding protein-like II
CLD04_RS21305	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS21315	SSF56281	Metallo-hydrolase/oxidoreductase
CLD04_RS21320	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS21325	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS21335	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CLD04_RS21340	SSF142906	YjbR-like
CLD04_RS21345	SSF53597	Dihydrofolate reductase-like
CLD04_RS21355	SSF52788	Phosphotyrosine protein phosphatases I
CLD04_RS21365	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS21370	SSF46785	"Winged helix" DNA-binding domain
CLD04_RS21385	SSF54001	Cysteine proteinases
CLD04_RS21390	SSF48208	Six-hairpin glycosidases
CLD04_RS21390	SSF52833	Thioredoxin-like
CLD04_RS21400	SSF103473	MFS general substrate transporter
CLD04_RS21405	SSF51161	Trimeric LpxA-like enzymes
CLD04_RS21410	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CLD04_RS21415	SSF47413	lambda repressor-like DNA-binding domains
CLD04_RS21415	SSF53822	Periplasmic binding protein-like I
CLD04_RS21420	SSF56219	DNase I-like
CLD04_RS21425	SSF46911	Ribosomal protein S18
CLD04_RS21430	SSF50249	Nucleic acid-binding proteins
CLD04_RS21435	SSF54995	Ribosomal protein S6
CLD04_RS21440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS21440	SSF81271	TGS-like
CLD04_RS21445	SSF50692	ADC-like
CLD04_RS21445	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CLD04_RS21460	SSF53163	HybD-like
CLD04_RS21465	SSF109709	KorB DNA-binding domain-like
CLD04_RS21465	SSF110849	ParB/Sulfiredoxin
CLD04_RS21470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS21480	SSF109709	KorB DNA-binding domain-like
CLD04_RS21480	SSF110849	ParB/Sulfiredoxin
CLD04_RS21485	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CLD04_RS21490	SSF51905	FAD/NAD(P)-binding domain
CLD04_RS21495	SSF116878	TrmE connector domain
CLD04_RS21495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CLD04_RS21500	SSF82708	R3H domain
CLD04_RS21510	SSF54211	Ribosomal protein S5 domain 2-like